Phyre 2 alignment of P76155 with d1ln1a_

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Job Description | P76155
Confidence | 11.35% | Date | Thu Jan 5 12:19:47 GMT 2012
Rank | 24 | Aligned Residues | 35
% Identity | 17% | Template | d1ln1a_
SCOP info | TBP-like | Bet v1-like | STAR domain
Resolution | 2.40

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |  |  | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | E | S | S | W | H | L | V | E | D | H | R | G | K | T | V | Y | D | V | . | . | A | S | G | D | A | L | F | I | S | E | L | G | P | L | P | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | G | A | D | W | Q | L | L | V | E | T | S | G | I | S | I | Y | R | L | L | D | K | K | T | G | L | Y | E | Y | K | V | F | G | V | L | E | D
Template Known Secondary structure |  | T | T | T | T |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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