16/01/2012 09:08:20 : INFO  : Run start: Mon Jan 16 09:08:19 GMT 2012
16/01/2012 09:08:23 : INFO  : Initialised job
16/01/2012 09:08:25 : INFO  : Renaming log file 'phyre2_20120116_090819.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/dc2f8108a470b279/phyre_20120116_090819.log'
16/01/2012 09:08:26 : INFO  : Initialised job:
Sequence
>batch____
MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNS
DESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEA
EKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTS
TAQDIEWPALP

16/01/2012 09:08:27 : INFO  : Checked sequence
16/01/2012 09:08:29 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 09:08:30 : INFO  : PSI-BLAST 3 iterations
16/01/2012 09:09:37 : INFO  : PSI-BLAST 5 iterations
16/01/2012 09:10:31 : INFO  : Finished PSI-BLAST
16/01/2012 09:10:33 : INFO  : Running Buildali to generate a3m file
16/01/2012 09:14:54 : INFO  : Converting to HMM
16/01/2012 09:14:55 : INFO  : Calibrating HMM
16/01/2012 09:15:05 : INFO  : Searching HMM database
16/01/2012 09:19:26 : INFO  : Finished buildali
16/01/2012 09:19:27 : INFO  : Predicting secondary structure
16/01/2012 09:19:35 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 09:19:37 : INFO  : Predicting Disordered regions
16/01/2012 09:19:40 : INFO  : Predicted Disorder (Disopred)
16/01/2012 09:19:41 : INFO  : Running memsat_svm check
16/01/2012 09:22:01 : INFO  : Globular protein
16/01/2012 09:22:02 : INFO  : Predicted Transmembrane (memsat_svm) ID 'dc2f8108a470b279'
16/01/2012 09:22:04 : INFO  : Initialising fold library search
16/01/2012 09:22:06 : INFO  : Initialised search input
16/01/2012 09:22:08 : INFO  : Building Ensemble models
16/01/2012 09:22:11 : INFO  : Building hh.c2kz6A_.model.1.pdb
16/01/2012 09:22:23 : INFO  : Building c2kz6A_.1.pdb
16/01/2012 09:22:35 : INFO  : Building d1jofa_.2.pdb
16/01/2012 09:22:46 : INFO  : Building c1gk6B_.3.pdb
16/01/2012 09:22:57 : INFO  : Building c2xv5A_.4.pdb
16/01/2012 09:23:08 : INFO  : Building c1rfoC_.5.pdb
16/01/2012 09:23:17 : INFO  : Building c2kt9A_.6.pdb
16/01/2012 09:23:28 : INFO  : Building c3o0rC_.7.pdb
16/01/2012 09:23:40 : INFO  : Building c1x8yA_.8.pdb
16/01/2012 09:23:52 : INFO  : Building c1v1hB_.9.pdb
16/01/2012 09:24:05 : INFO  : Building c2jxwA_.10.pdb
16/01/2012 09:24:19 : INFO  : Building c1k6nH_.11.pdb
16/01/2012 09:24:33 : INFO  : Building c1gk4A_.12.pdb
16/01/2012 09:24:47 : INFO  : Building c1ox3A_.13.pdb
16/01/2012 09:25:01 : INFO  : Building c3movB_.14.pdb
16/01/2012 09:25:14 : INFO  : Building d1rzhh1.15.pdb
16/01/2012 09:25:27 : INFO  : Building c1avyA_.16.pdb
16/01/2012 09:25:40 : INFO  : Building c2ov2O_.17.pdb
16/01/2012 09:25:53 : INFO  : Building c2odbB_.18.pdb
16/01/2012 09:26:06 : INFO  : Building d2rm0w1.19.pdb
16/01/2012 09:26:18 : INFO  : Building d2dk1a1.20.pdb
16/01/2012 09:26:47 : INFO  : Finished HH model building
16/01/2012 09:26:49 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 09:28:41 : INFO  : html domain output complete ID 'dc2f8108a470b279'
16/01/2012 09:37:48 : INFO  : Run end  : Mon Jan 16 09:37:47 GMT 2012
