18/01/2012 09:54:56 : INFO  : Run start: Wed Jan 18 09:54:55 GMT 2012
18/01/2012 09:54:59 : INFO  : Initialised job
18/01/2012 09:55:00 : INFO  : Renaming log file 'phyre2_20120118_095455.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/dc1f38dbb00d2a73/phyre_20120118_095455.log'
18/01/2012 09:55:01 : INFO  : Initialised job:
Sequence
>batch____
MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGI
ELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNREL
ENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI
GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTVSESNKG

18/01/2012 09:55:02 : INFO  : Checked sequence
18/01/2012 09:55:04 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 09:55:05 : INFO  : PSI-BLAST 3 iterations
18/01/2012 09:56:50 : INFO  : PSI-BLAST 5 iterations
18/01/2012 09:58:50 : INFO  : Finished PSI-BLAST
18/01/2012 09:58:52 : INFO  : Running Buildali to generate a3m file
18/01/2012 10:05:35 : INFO  : Converting to HMM
18/01/2012 10:05:37 : INFO  : Calibrating HMM
18/01/2012 10:05:49 : INFO  : Searching HMM database
18/01/2012 10:11:05 : INFO  : Finished buildali
18/01/2012 10:11:06 : INFO  : Predicting secondary structure
18/01/2012 10:11:10 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 10:11:11 : INFO  : Predicting Disordered regions
18/01/2012 10:11:13 : INFO  : Predicted Disorder (Disopred)
18/01/2012 10:11:14 : INFO  : Running memsat_svm check
18/01/2012 10:13:23 : INFO  : Running memsat_svm full
18/01/2012 10:18:57 : INFO  : Predicted Transmembrane (memsat_svm) ID 'dc1f38dbb00d2a73'
18/01/2012 10:18:58 : INFO  : Initialising fold library search
18/01/2012 10:19:00 : INFO  : Initialised search input
18/01/2012 10:19:02 : INFO  : Building Ensemble models
18/01/2012 10:19:04 : INFO  : Building hh.c2bbjB_.model.1.pdb
18/01/2012 10:19:13 : INFO  : Building hh.c1ciiA_.model.2.pdb
18/01/2012 10:19:20 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/dc1f38dbb00d2a73/hh.c1ciiA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/dc1f38dbb00d2a73/c1ciiA_.2.pdb
18/01/2012 10:19:23 : INFO  : Building c2bbjB_.1.pdb
18/01/2012 10:19:32 : INFO  : Building c1ciiA_.2.pdb
18/01/2012 10:19:40 : INFO  : Building d1o5ha_.3.pdb
18/01/2012 10:19:48 : INFO  : Building c2ap7A_.4.pdb
18/01/2012 10:19:57 : INFO  : Building c2ap8A_.5.pdb
18/01/2012 10:20:06 : INFO  : Building d1jt6a1.6.pdb
18/01/2012 10:20:16 : INFO  : Building d1rkta1.7.pdb
18/01/2012 10:20:29 : INFO  : Building c1tt9B_.8.pdb
18/01/2012 10:20:43 : INFO  : Building d1vi0a1.9.pdb
18/01/2012 10:20:57 : INFO  : Building d1q8da_.10.pdb
18/01/2012 10:21:10 : INFO  : Building c2dg8D_.11.pdb
18/01/2012 10:21:17 : INFO  : Building d1zk8a1.12.pdb
18/01/2012 10:21:24 : INFO  : Building d1pb6a1.13.pdb
18/01/2012 10:21:32 : INFO  : Building c3s5rA_.14.pdb
18/01/2012 10:21:39 : INFO  : Building d2fbqa1.15.pdb
18/01/2012 10:21:47 : INFO  : Building c3gziA_.16.pdb
18/01/2012 10:21:54 : INFO  : Building c2l4gA_.17.pdb
18/01/2012 10:22:01 : INFO  : Building c1u9nA_.18.pdb
18/01/2012 10:22:08 : INFO  : Building c2v5eA_.19.pdb
18/01/2012 10:22:15 : INFO  : Building c3fubA_.20.pdb
18/01/2012 10:22:40 : INFO  : Finished HH model building
18/01/2012 10:22:41 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 10:24:13 : INFO  : html domain output complete ID 'dc1f38dbb00d2a73'
18/01/2012 10:32:43 : INFO  : Run end  : Wed Jan 18 10:32:42 GMT 2012
