BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (442 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P75801 Uncharacterized membrane protein yliF n=57 Tax=E... 904 0.0 UniRef50_B7LP32 Putative enzyme with GGDEF domain n=1 Tax=Escher... 390 e-107 UniRef50_A6W118 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL... 99 4e-19 UniRef50_Q1MZM1 Sensory transduction protein kinase n=1 Tax=Berm... 99 5e-19 UniRef50_C9PKI6 GGDEF domain protein n=1 Tax=Vibrio furnissii CI... 96 4e-18 UniRef50_D0Z557 Hypothetical membrane spanning protein n=1 Tax=P... 95 5e-18 UniRef50_B9L9J0 Diguanylate cyclase n=2 Tax=Nautiliaceae RepID=B... 94 8e-18 UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testostero... 94 1e-17 UniRef50_UPI0001BC39B0 response regulator PleD n=1 Tax=Butyrivib... 93 2e-17 UniRef50_A8FVW6 Conserved hypothetical GGDEF family protein n=1 ... 93 2e-17 UniRef50_C9PKI7 GGDEF domain protein n=1 Tax=Vibrio furnissii CI... 92 3e-17 UniRef50_Q8D4A5 FOG: GGDEF domain n=3 Tax=Vibrio vulnificus RepI... 92 4e-17 UniRef50_C9PIY1 GGDEF family protein n=1 Tax=Vibrio furnissii CI... 92 4e-17 UniRef50_Q2BMX5 GGDEF family protein n=1 Tax=Neptuniibacter caes... 92 4e-17 UniRef50_B9Z2F9 Response regulator receiver modulated diguanylat... 92 5e-17 UniRef50_A8FHG3 Possible diguanylate cyclase n=2 Tax=Bacillus pu... 92 5e-17 UniRef50_C1DBE5 GGDEF family protein n=1 Tax=Laribacter hongkong... 91 6e-17 UniRef50_B9R667 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 91 8e-17 UniRef50_C6B9M0 Diguanylate cyclase n=2 Tax=Rhizobium leguminosa... 91 8e-17 UniRef50_D0Z364 Hypothetical GGDEF family protein n=1 Tax=Photob... 91 1e-16 UniRef50_A7HJP9 Diguanylate cyclase n=1 Tax=Fervidobacterium nod... 91 1e-16 UniRef50_A8H9R4 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8H... 90 1e-16 UniRef50_C7I4T4 Diguanylate cyclase n=1 Tax=Thiomonas intermedia... 90 2e-16 UniRef50_A8GCJ7 Diguanylate cyclase n=2 Tax=Serratia RepID=A8GCJ... 89 2e-16 UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=N... 89 2e-16 UniRef50_A8VR65 Putative diguanylate cyclase n=1 Tax=Bacillus se... 89 3e-16 UniRef50_B7VMS0 Sensory transduction/ GGDEF family protein n=2 T... 89 3e-16 UniRef50_Q488E6 GGDEF domain protein n=1 Tax=Colwellia psychrery... 89 4e-16 UniRef50_Q2W9E2 Predicted signal transduction protein n=2 Tax=Ma... 88 5e-16 UniRef50_A4BI17 Putative uncharacterized protein n=1 Tax=Reineke... 88 5e-16 UniRef50_A8UY33 Putative uncharacterized protein n=1 Tax=Hydroge... 88 6e-16 UniRef50_Q7UJ25 Putative uncharacterized protein n=1 Tax=Rhodopi... 88 6e-16 UniRef50_A9FJ67 FHA and GGDEF domain protein n=1 Tax=Sorangium c... 88 7e-16 UniRef50_A9C0B6 Diguanylate cyclase n=3 Tax=cellular organisms R... 88 7e-16 UniRef50_Q12S31 Diguanylate cyclase n=17 Tax=Shewanella RepID=Q1... 88 8e-16 UniRef50_D1B521 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 87 8e-16 UniRef50_B1KD38 Diguanylate cyclase n=1 Tax=Shewanella woodyi AT... 87 8e-16 UniRef50_C6CYU5 Response regulator receiver modulated diguanylat... 87 1e-15 UniRef50_D1B3P8 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 87 1e-15 UniRef50_B9L7S4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Na... 87 1e-15 UniRef50_D0Z4N2 GGDEF family protein n=1 Tax=Photobacterium dams... 87 1e-15 UniRef50_Q1YM41 Conserved hypothetical membrane protein with GGD... 87 1e-15 UniRef50_Q1ZSN4 GGDEF family protein n=1 Tax=Photobacterium angu... 87 1e-15 UniRef50_A8FYV4 GGDEF domain-like protein n=1 Tax=Shewanella sed... 87 1e-15 UniRef50_Q0G275 Diguanylate cyclase n=1 Tax=Fulvimarina pelagi H... 87 1e-15 UniRef50_Q2B6Y4 Putative uncharacterized protein n=1 Tax=Bacillu... 87 1e-15 UniRef50_A9FZW1 FHA domain protein n=1 Tax=Sorangium cellulosum ... 87 2e-15 UniRef50_O86287 Putative uncharacterized protein orfC n=1 Tax=La... 87 2e-15 UniRef50_A3XAQ5 Putative diguanylate cyclase (GGDEF domain) n=1 ... 87 2e-15 UniRef50_D2BPD8 Diguanylate cyclase with GAF sensor domain n=1 T... 87 2e-15 UniRef50_C6PTW3 Diguanylate cyclase n=1 Tax=Clostridium carboxid... 87 2e-15 UniRef50_A4G283 Putative uncharacterized protein n=1 Tax=Hermini... 87 2e-15 UniRef50_D2TII3 Diguanylate cyclase YddV n=13 Tax=Enterobacteria... 87 2e-15 UniRef50_A0XYT9 Diguanylate cyclase n=1 Tax=Alteromonadales bact... 86 2e-15 UniRef50_C6CDM3 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 86 2e-15 UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Breviba... 86 2e-15 UniRef50_Q1J3M1 Diguanylate cyclase with GAF sensor n=2 Tax=Dein... 86 2e-15 UniRef50_C6CM30 Diguanylate cyclase n=1 Tax=Dickeya zeae Ech1591... 86 2e-15 UniRef50_A8FRI3 Putative diguanylate cyclase (GGDEF domain) n=1 ... 86 3e-15 UniRef50_B0TRJ7 Diguanylate cyclase n=1 Tax=Shewanella halifaxen... 86 3e-15 UniRef50_A3Y977 Diguanylate cyclase (GGDEF domain) n=1 Tax=Marin... 86 3e-15 UniRef50_C8Q339 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 86 4e-15 UniRef50_Q7MJY8 GGDEF family protein n=13 Tax=Vibrio RepID=Q7MJY... 86 4e-15 UniRef50_C4KYP8 Diguanylate cyclase with GAF sensor n=1 Tax=Exig... 86 4e-15 UniRef50_Q7MF60 GGDEF family protein n=69 Tax=Gammaproteobacteri... 85 4e-15 UniRef50_D0YKI6 Diguanylate cyclase n=3 Tax=Klebsiella RepID=D0Y... 85 4e-15 UniRef50_C9YGW5 Putative uncharacterized protein n=1 Tax=Curviba... 85 4e-15 UniRef50_B1Y8F4 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii... 85 5e-15 UniRef50_C6DBE3 Diguanylate cyclase n=5 Tax=Pectobacterium RepID... 85 5e-15 UniRef50_C7LTX9 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 85 5e-15 UniRef50_A6FJF7 Probable GGDEF family regulatory protein n=1 Tax... 85 6e-15 UniRef50_Q30R33 Diguanylate cyclase (GGDEF domain) n=2 Tax=Campy... 85 6e-15 UniRef50_A0KMP3 GGDEF domain protein n=2 Tax=Aeromonas RepID=A0K... 85 6e-15 UniRef50_Q3IC23 Putative GGDEF domain membrane protein n=2 Tax=A... 85 6e-15 UniRef50_D1CA84 Diguanylate cyclase and serine/threonine protein... 85 7e-15 UniRef50_C7R5P3 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 85 7e-15 UniRef50_B1YFH0 Diguanylate cyclase n=1 Tax=Exiguobacterium sibi... 84 7e-15 UniRef50_A4BD76 GGDEF domain protein n=1 Tax=Reinekea blandensis... 84 7e-15 UniRef50_D2C2R9 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 84 7e-15 UniRef50_C8QCH2 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 84 8e-15 UniRef50_D0I8G1 Diguanylate cyclase n=1 Tax=Grimontia hollisae C... 84 8e-15 UniRef50_B5CPJ5 Putative uncharacterized protein n=1 Tax=Ruminoc... 84 8e-15 UniRef50_UPI0001B53B7D diguanylate cyclase n=1 Tax=Streptomyces ... 84 9e-15 UniRef50_D2C311 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 84 9e-15 UniRef50_A8VQE2 Putative diguanylate cyclase n=1 Tax=Bacillus se... 84 9e-15 UniRef50_B6BHL9 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 84 9e-15 UniRef50_A3USF1 GGDEF family protein n=2 Tax=Vibrionales RepID=A... 84 1e-14 UniRef50_Q8D5C1 FOG: GGDEF domain n=1 Tax=Vibrio vulnificus RepI... 84 1e-14 UniRef50_A7HKL8 Response regulator receiver modulated diguanylat... 84 1e-14 UniRef50_C4G287 Putative uncharacterized protein n=1 Tax=Abiotro... 84 1e-14 UniRef50_C6CT46 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 84 1e-14 UniRef50_UPI0001C4254B Signal transduction diguanylate cyclase (... 84 1e-14 UniRef50_C4ICK4 Diverse intracellular signaling/diguanylate cycl... 84 1e-14 UniRef50_C0GKX4 Diguanylate cyclase n=1 Tax=Dethiobacter alkalip... 84 1e-14 UniRef50_Q320T0 Diguanylate cyclase yddV n=41 Tax=Enterobacteria... 84 1e-14 UniRef50_A8FBD0 ABC superfamily ATP binding cassette transporter... 84 1e-14 UniRef50_A6ANT2 Putative signal transduction protein n=1 Tax=Vib... 84 1e-14 UniRef50_A9WGU1 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 84 1e-14 UniRef50_C4G1X3 Putative uncharacterized protein n=1 Tax=Abiotro... 84 1e-14 UniRef50_P31129 Uncharacterized protein ydeH n=55 Tax=Enterobact... 84 1e-14 UniRef50_B1M823 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 84 1e-14 UniRef50_B4RU26 GGDEF protein n=2 Tax=Alteromonas macleodii RepI... 84 2e-14 UniRef50_A5F099 GGDEF family protein n=33 Tax=Vibrio RepID=A5F09... 84 2e-14 UniRef50_Q3AB06 GGDEF domain protein n=1 Tax=Carboxydothermus hy... 84 2e-14 UniRef50_D0ICL2 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 83 2e-14 UniRef50_C1ZLY6 Diguanylate cyclase (GGDEF) domain-containing pr... 83 2e-14 UniRef50_B9Y8S6 Putative uncharacterized protein n=1 Tax=Holdema... 83 2e-14 UniRef50_A1TXD1 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 83 2e-14 UniRef50_A0P262 Putative kinase/esterase n=1 Tax=Labrenzia aggre... 83 2e-14 UniRef50_A0NVH7 Sensory box/GGDEF domain/EAL domain protein n=1 ... 83 2e-14 UniRef50_A6DD54 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 83 2e-14 UniRef50_C8X3X4 Diguanylate cyclase n=1 Tax=Desulfohalobium retb... 83 2e-14 UniRef50_B9L6D0 Ggdef domain protein n=1 Tax=Nautilia profundico... 83 2e-14 UniRef50_Q30UN0 Diguanylate cyclase (GGDEF domain) n=2 Tax=Campy... 83 2e-14 UniRef50_Q317L8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desul... 83 2e-14 UniRef50_A7VC05 Putative uncharacterized protein n=1 Tax=Clostri... 83 2e-14 UniRef50_A5F8G7 GGDEF family protein n=31 Tax=Vibrio RepID=A5F8G... 83 2e-14 UniRef50_A6WF17 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ki... 83 2e-14 UniRef50_C1XK82 Diguanylate cyclase (GGDEF) domain-containing pr... 83 2e-14 UniRef50_Q2BMY9 Putative uncharacterized protein n=1 Tax=Neptuni... 83 2e-14 UniRef50_B6BMK7 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 83 2e-14 UniRef50_D0I2V0 GGDEF family protein n=1 Tax=Grimontia hollisae ... 83 2e-14 UniRef50_Q2BN01 GGDEF domain protein n=1 Tax=Neptuniibacter caes... 83 2e-14 UniRef50_C0EU57 Putative uncharacterized protein n=1 Tax=Eubacte... 83 2e-14 UniRef50_A4BK52 GGDEF domain protein n=1 Tax=Reinekea blandensis... 83 3e-14 UniRef50_Q15PL7 Response regulator receiver modulated diguanylat... 83 3e-14 UniRef50_Q1N3P2 Probable two-component response regulator n=1 Ta... 83 3e-14 UniRef50_A0KN72 GGDEF, putative n=1 Tax=Aeromonas hydrophila sub... 82 3e-14 UniRef50_A3Y4T8 Signal transduction protein containing a membran... 82 3e-14 UniRef50_A6T3X3 Uncharacterized conserved protein n=1 Tax=Janthi... 82 3e-14 UniRef50_A3Y705 GGDEF domain protein n=2 Tax=Oceanospirillaceae ... 82 3e-14 UniRef50_B1HWA5 Putative diguanylate cyclase (GGDEF domain) n=2 ... 82 3e-14 UniRef50_C9AU95 GGDEF domain-containing protein n=3 Tax=Enteroco... 82 3e-14 UniRef50_C6D4J1 Diguanylate cyclase with GAF sensor n=2 Tax=Paen... 82 3e-14 UniRef50_C0QUK0 Signal transduction response regulator n=1 Tax=P... 82 3e-14 UniRef50_C5SH16 Diguanylate cyclase/phosphodiesterase with PAS/P... 82 3e-14 UniRef50_A5GBU3 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GB... 82 4e-14 UniRef50_A1SZ67 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 82 4e-14 UniRef50_D0YWB6 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 82 4e-14 UniRef50_C4V1U7 Possible diguanylate cyclase (GGDEF) n=1 Tax=Sel... 82 4e-14 UniRef50_B7KF34 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7... 82 4e-14 UniRef50_UPI0001826481 hypothetical protein EcanA3_13727 n=1 Tax... 82 4e-14 UniRef50_B5XYF0 Diguanylate cyclase n=6 Tax=Proteobacteria RepID... 82 4e-14 UniRef50_A1HRZ7 Diguanylate cyclase n=1 Tax=Thermosinus carboxyd... 82 4e-14 UniRef50_Q15QF9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 82 4e-14 UniRef50_A1SVZ1 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 82 4e-14 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 82 4e-14 UniRef50_A4CF43 Putative uncharacterized protein n=1 Tax=Pseudoa... 82 4e-14 UniRef50_C4L084 Diguanylate cyclase/phosphodiesterase with GAF s... 82 4e-14 UniRef50_A3WKY3 Putative uncharacterized protein n=1 Tax=Idiomar... 82 5e-14 UniRef50_B7GHW2 Multidomain signal transduction protein (GGDEF a... 82 5e-14 UniRef50_C0Z7T1 Putative uncharacterized protein n=1 Tax=Breviba... 82 5e-14 UniRef50_A6GF95 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesi... 82 5e-14 UniRef50_Q2BLA2 Putative uncharacterized protein n=1 Tax=Neptuni... 82 5e-14 UniRef50_B6BIZ0 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 82 5e-14 UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliob... 82 5e-14 UniRef50_C6P3N4 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 82 5e-14 UniRef50_Q5E0A0 GGDEF domain protein n=2 Tax=Vibrio fischeri Rep... 82 5e-14 UniRef50_Q7CYR0 GGDEF family protein n=4 Tax=Rhizobium/Agrobacte... 82 6e-14 UniRef50_A5UW82 Diguanylate cyclase n=2 Tax=Roseiflexus RepID=A5... 82 6e-14 UniRef50_B0TH60 Ggdef domain protein, putative n=1 Tax=Heliobact... 81 6e-14 UniRef50_A9BI72 Diguanylate cyclase n=1 Tax=Petrotoga mobilis SJ... 81 6e-14 UniRef50_D2R798 Diguanylate cyclase n=1 Tax=Pirellula staleyi DS... 81 6e-14 UniRef50_A3WMF3 PAS:GGDEF protein n=1 Tax=Idiomarina baltica OS1... 81 6e-14 UniRef50_A1S668 GGDEF domain-like protein n=1 Tax=Shewanella ama... 81 6e-14 UniRef50_Q5FJ86 Regulator components n=2 Tax=Lactobacillus acido... 81 6e-14 UniRef50_C8WI27 Diguanylate cyclase n=1 Tax=Eggerthella lenta DS... 81 6e-14 UniRef50_B2VGK6 Putative uncharacterized protein n=1 Tax=Erwinia... 81 7e-14 UniRef50_C7R8C5 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 81 7e-14 UniRef50_A6VRQ9 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL... 81 7e-14 UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 81 7e-14 UniRef50_B0KCF6 Diguanylate cyclase with GAF sensor n=12 Tax=The... 81 7e-14 UniRef50_B8GLI2 Response regulator receiver modulated diguanylat... 81 7e-14 UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium... 81 7e-14 UniRef50_B0C7A4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ac... 81 7e-14 UniRef50_A0L914 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 81 7e-14 UniRef50_Q21FP0 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 81 7e-14 UniRef50_Q1K364 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 81 7e-14 UniRef50_Q4UZ02 GGDEF family protein n=10 Tax=Xanthomonas RepID=... 81 8e-14 UniRef50_Q31GI5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 81 8e-14 UniRef50_C4DER9 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 81 8e-14 UniRef50_Q4KAN5 GGDEF domain protein n=4 Tax=Pseudomonas RepID=Q... 81 8e-14 UniRef50_A8VS95 Response regulator receiver protein n=1 Tax=Baci... 81 8e-14 UniRef50_C6XCT4 7TM domain sensor diguanylate cyclase n=2 Tax=Be... 81 8e-14 UniRef50_B5ABD9 Response regulator n=1 Tax=Enterobacter sp. FMB-... 81 9e-14 UniRef50_B6BGK8 Signal transduction response regulator-chey like... 81 1e-13 UniRef50_B4RRS5 Putative response regulator n=2 Tax=Alteromonas ... 81 1e-13 UniRef50_Q2W9B2 GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W9... 81 1e-13 UniRef50_UPI0001850EBC integral membrane sensor signal transduct... 80 1e-13 UniRef50_B8D1T3 Diguanylate cyclase n=1 Tax=Halothermothrix oren... 80 1e-13 UniRef50_Q0G1R3 Periplasmic sensor diguanylate cyclase (GGDEF) n... 80 1e-13 UniRef50_C6WPQ8 Diguanylate cyclase n=1 Tax=Actinosynnema mirum ... 80 1e-13 UniRef50_Q0ANN0 Diguanylate cyclase n=1 Tax=Maricaulis maris MCS... 80 1e-13 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 80 1e-13 UniRef50_A7GS68 Diguanylate cyclase n=77 Tax=Bacillus RepID=A7GS... 80 1e-13 UniRef50_D0KW78 Diguanylate cyclase n=1 Tax=Halothiobacillus nea... 80 1e-13 UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax... 80 1e-13 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 80 1e-13 UniRef50_Q1Z2S8 Putative uncharacterized protein n=1 Tax=Photoba... 80 1e-13 UniRef50_Q31FV1 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 80 1e-13 UniRef50_B7AX06 Putative uncharacterized protein n=1 Tax=Bactero... 80 1e-13 UniRef50_C3X307 Predicted protein n=2 Tax=Oxalobacter formigenes... 80 1e-13 UniRef50_C1SHV7 Diguanylate cyclase (GGDEF) domain-containing pr... 80 1e-13 UniRef50_Q1J0W6 Diguanylate cyclase n=1 Tax=Deinococcus geotherm... 80 1e-13 UniRef50_C9YAH7 Putative uncharacterized protein n=1 Tax=Curviba... 80 1e-13 UniRef50_C0N1J5 GGDEF domain protein n=1 Tax=Methylophaga thioox... 80 1e-13 UniRef50_B0P2M7 Putative uncharacterized protein n=1 Tax=Clostri... 80 1e-13 UniRef50_Q46NC3 PAS:GGDEF n=1 Tax=Ralstonia eutropha JMP134 RepI... 80 1e-13 UniRef50_B9K4F3 GGDEF family protein n=1 Tax=Agrobacterium vitis... 80 1e-13 UniRef50_D1AZZ8 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 80 1e-13 UniRef50_Q31JI7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 80 1e-13 UniRef50_A8LJ52 Putative uncharacterized protein n=1 Tax=Dinoros... 80 1e-13 UniRef50_Q6FA46 Putative uncharacterized protein n=1 Tax=Acineto... 80 1e-13 UniRef50_A5L069 Sensory transduction/ GGDEF family protein n=2 T... 80 1e-13 UniRef50_D2BSV0 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 80 1e-13 UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii ... 80 1e-13 UniRef50_UPI0001C427B8 response regulator receiver modulated dig... 80 1e-13 UniRef50_A8HV12 Putative uncharacterized protein n=1 Tax=Azorhiz... 80 2e-13 UniRef50_A1B8E3 Diguanylate cyclase n=1 Tax=Paracoccus denitrifi... 80 2e-13 UniRef50_A6Q580 Putative uncharacterized protein n=1 Tax=Nitrati... 80 2e-13 UniRef50_C0C066 Putative uncharacterized protein n=1 Tax=Clostri... 80 2e-13 UniRef50_A5EN18 Periplasmic sensor diguanylate cyclase/phosphodi... 80 2e-13 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 80 2e-13 UniRef50_B8KAC4 Ggdef family protein n=1 Tax=Vibrio parahaemolyt... 80 2e-13 UniRef50_Q6MN29 GGDEF domain protein n=1 Tax=Bdellovibrio bacter... 80 2e-13 UniRef50_A5VMQ1 Diguanylate cyclase n=5 Tax=Lactobacillus RepID=... 80 2e-13 UniRef50_UPI0000E0EEC9 GGDEF domain-containing protein n=1 Tax=G... 80 2e-13 UniRef50_B8G2F8 Diguanylate cyclase n=2 Tax=Desulfitobacterium h... 80 2e-13 UniRef50_C5B8C0 Putative uncharacterized protein n=2 Tax=Edwards... 80 2e-13 UniRef50_C6BSU0 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 80 2e-13 UniRef50_C8WUQ5 Diguanylate cyclase n=2 Tax=Alicyclobacillus aci... 80 2e-13 UniRef50_B7VPC0 Intracellular signaling protein (PAS,GAF,GGDEF d... 80 2e-13 UniRef50_A8W114 Response regulator receiver protein n=1 Tax=Baci... 80 2e-13 UniRef50_B8DKM1 Diguanylate cyclase n=1 Tax=Desulfovibrio vulgar... 80 2e-13 UniRef50_A6C9X3 GGDEF domain-like protein n=1 Tax=Planctomyces m... 80 2e-13 UniRef50_C1CWH3 Putative Diguanylate cyclase (GGDEF domain prote... 80 2e-13 UniRef50_A9W1F1 Diguanylate cyclase n=7 Tax=Alphaproteobacteria ... 80 2e-13 UniRef50_Q1YJ80 GGDEF domain n=2 Tax=Aurantimonadaceae RepID=Q1Y... 80 2e-13 UniRef50_Q12JJ7 GGDEF domain n=1 Tax=Shewanella denitrificans OS... 79 2e-13 UniRef50_B9ZS89 Diguanylate cyclase with PAS/PAC and GAF sensors... 79 2e-13 UniRef50_A1S4I5 Diguanylate cyclase n=8 Tax=Shewanella RepID=A1S... 79 2e-13 UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepI... 79 2e-13 UniRef50_A4FQC3 Diguanylate cyclase n=1 Tax=Saccharopolyspora er... 79 2e-13 UniRef50_Q5DYR4 Two component response regulator, GGDEF domain p... 79 3e-13 UniRef50_C6B4A5 Diguanylate cyclase n=10 Tax=Rhizobiales RepID=C... 79 3e-13 UniRef50_Q3IKK3 Putative uncharacterized protein n=1 Tax=Pseudoa... 79 3e-13 UniRef50_Q1RHW0 Regulatory components of sensory transduction sy... 79 3e-13 UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (... 79 3e-13 UniRef50_Q03SW5 Signal transduction diguanylate cyclase n=1 Tax=... 79 3e-13 UniRef50_A1AQ26 Diguanylate cyclase n=1 Tax=Pelobacter propionic... 79 3e-13 >UniRef50_P75801 Uncharacterized membrane protein yliF n=57 Tax=Enterobacteriaceae RepID=YLIF_ECOLI Length = 442 Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/442 (100%), Positives = 442/442 (100%) Query: 1 MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVA 60 MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVA Sbjct: 1 MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVA 60 Query: 61 IDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQ 120 IDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQ Sbjct: 61 IDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQ 120 Query: 121 VVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSL 180 VVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSL Sbjct: 121 VVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSL 180 Query: 181 FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA 240 FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA Sbjct: 181 FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA 240 Query: 241 VISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL 300 VISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL Sbjct: 241 VISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL 300 Query: 301 TKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV 360 TKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV Sbjct: 301 TKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV 360 Query: 361 DKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERL 420 DKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERL Sbjct: 361 DKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERL 420 Query: 421 KMLADERLYKSKKNGRAQISWQ 442 KMLADERLYKSKKNGRAQISWQ Sbjct: 421 KMLADERLYKSKKNGRAQISWQ 442 >UniRef50_B7LP32 Putative enzyme with GGDEF domain n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LP32_ESCF3 Length = 503 Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust. Identities = 187/436 (42%), Positives = 284/436 (65%), Gaps = 4/436 (0%) Query: 11 VSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVAIDLINTLNPT 70 +S+L F+ ISA+ C +YT+ VK ++ ++K +++D +VAN++EYRR+VA +L++ +N Sbjct: 68 ISVLCFVFISAITCTLYTENVKSKINAVKTAIVDNGLSVANVSEYRRAVATNLLDKINSN 127 Query: 71 EEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQVVKYRHVKNT 130 E L +R +YA+ +P YLYD+GP+ I++D CI + +YC +IM K + Sbjct: 128 PEDFLNHIRQSYAEQPAPGYLYDIGPFFINNDHCINITMKGGDYCKEIMTAFKVNNHHQI 187 Query: 131 GFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFK---NGKPV 187 G I F GK + YY +PV + SLIF++ ER+ L K ++L SL+ N K + Sbjct: 188 GIIKFSGKGYAYYQHPVGYRMSLIFVVDPERYLSLMKLQTEKRQDLFISLYDINDNEKRI 247 Query: 188 TGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASC 247 GD++ ++IF +S + +Y+P +++ AYKK Y +C ++I +A++ + Sbjct: 248 AGDDFLISDSIFPMSASTRALSYVPDMMFIVAYKKSKYFAICFILIAISAVITWLIYHYH 307 Query: 248 LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRK 307 + L+ +++ RG +EKEAI++N F + +FFS +++ + +Y+ D LT+A R+ Sbjct: 308 VKLLSKILYRGQLEKEAILSNQFHEIRGENIFFSPSEINMIRDIYDFGAYDSLTRASVRR 367 Query: 308 SFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 FD D+ L E G+LCLFDVDKFK IND FGHL GDEVL+K+V ++K Q+P DKG VYR Sbjct: 368 IFDSDINDLSENFGFLCLFDVDKFKVINDKFGHLFGDEVLIKLVGLIKEQLPCDKGDVYR 427 Query: 368 FGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNEC-PTVERLKMLADE 426 FGGDEFA+IY L LL +L IV F++G +N S SIG+A + EC +ERLK++ADE Sbjct: 428 FGGDEFAIIYRDNDLNALLHMLSHIVRFRMGGLNCSCSIGIASTEECGNNIERLKVMADE 487 Query: 427 RLYKSKKNGRAQISWQ 442 RLYKSKKNGRAQI+WQ Sbjct: 488 RLYKSKKNGRAQITWQ 503 >UniRef50_A6W118 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W118_MARMS Length = 384 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 92/167 (55%), Gaps = 17/167 (10%) Query: 288 LYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVL 347 L + A+LDD+TK GR++ +E L L K + + DVD FK NDTFGH +GD+VL Sbjct: 213 LMESHRMAYLDDMTKLPGRRALNEQLVGL-SKYYAIAMVDVDHFKKFNDTFGHDMGDKVL 271 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEE---LLSILKEIVHF--------- 395 V LK G+ +RFGG+EF +++ G L E +L +++E + Sbjct: 272 KSVAAQLKQF--SSPGRAFRFGGEEFTIVFRGKRLSEVDGILELIRENIESALVEVFDPK 329 Query: 396 --QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 Q +N++ SIGVA + + + + ADE LY+SKK GR ++S Sbjct: 330 KKQETEVNVTASIGVAFAVVGESSDSVLKRADEALYQSKKKGRNRVS 376 >UniRef50_Q1MZM1 Sensory transduction protein kinase n=1 Tax=Bermanella marisrubri RepID=Q1MZM1_9GAMM Length = 371 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 26/170 (15%) Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 Y AF+D+LT GR++ + LK LP K YL + DVD FK NDT GH +GD+VL V Sbjct: 202 YFMAFVDELTGIAGRRALEFKLKTLP-KHYYLAMLDVDHFKKFNDTHGHQVGDDVLRTVA 260 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE----IVHF------------ 395 K++ + K YR+GG+EFA+++ G + E+++ L+E I + Sbjct: 261 KLISQ---TRQAKAYRYGGEEFALVFKNGAVSEIVACLEETRKAIAEYPLYPKSRKRDKN 317 Query: 396 ------QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 Q ++++ S G+A ++ + ++ AD+ LY++KK GR +I Sbjct: 318 SRGKGSQRKPLHITVSFGLAQQHKGESHPQVIERADKALYQAKKKGRNRI 367 >UniRef50_C9PKI6 GGDEF domain protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PKI6_VIBFU Length = 489 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 21/220 (9%) Query: 232 IIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYS- 290 I++F I+ LY+ RR+ VEK + + G L + AD L S Sbjct: 264 IVYFLTFSLTINTLCWLYMRRRIQQ---VEKHLVTGLMKATPVPGNL--NIADAIHLLSE 318 Query: 291 ----MYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYL-CLFDVDKFKNINDTFGHLLGDE 345 + + +D LT R++ D DL +L E G L + D+D FK+INDT+GH GD Sbjct: 319 RRNTLRKESLIDGLTGLNNRRALDNDLPSLIEDGATLVAMLDIDYFKSINDTYGHQTGDT 378 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------VHFQVGS 399 VL I ++Q+P ++YR+GG+EF +++ T + L +L+++ + G Sbjct: 379 VLKTFAAIAEAQLPPQSTRIYRYGGEEFVIVFVRVTPSQALEMLEQLRLSIAQYQWHQGP 438 Query: 400 INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ S G+A C LAD RLY++K++GR +I Sbjct: 439 HQVTFSAGLA---SC-ADADAIALADARLYEAKRSGRNRI 474 >UniRef50_D0Z557 Hypothetical membrane spanning protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z557_LISDA Length = 559 Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 16/161 (9%) Query: 289 YSMYNSAFL-DDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVL 347 Y + NS L D+LTK RK ++ D+K L YL L D+D FK IND +GH +GD VL Sbjct: 400 YILINSENLNDELTKIGNRKKYNRDIKKLGFNVYYLVLIDIDNFKLINDRYGHDVGDYVL 459 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLS---- 403 K+ ++ +P + ++YR GG+EFA+I+ G + ++ I+ H ++ NLS Sbjct: 460 KKLSNVISHLLP-NNSEIYRIGGEEFAIIFRGCHPQNIVDIMN---HIRINVENLSWNSI 515 Query: 404 ----TSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 SIG+A S+ V + ADE LY SK +G+ Q+S Sbjct: 516 DKVTISIGIARSDNSKDVYK---KADELLYLSKTSGKNQLS 553 >UniRef50_B9L9J0 Diguanylate cyclase n=2 Tax=Nautiliaceae RepID=B9L9J0_NAUPA Length = 293 Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 56/165 (33%), Positives = 90/165 (54%), Gaps = 17/165 (10%) Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVDKFKNINDTFGH 340 +L Y +D LTK RK+ + DL + EKG + + D+D FK IND +GH Sbjct: 125 ELDKAYKELLIDPLTKVYNRKALNNDLNEILEKGKDKNLDLVIAIVDLDLFKEINDKYGH 184 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH------ 394 L+GD VL+K+ I++ I + K+YR+GGDEF +++ TL ++ I++ IVH Sbjct: 185 LVGDFVLIKIANIIRKMIR-KENKIYRYGGDEFIIVFNRMTLAQVKPIIQRIVHKIESTL 243 Query: 395 --FQVGSINLSTSIGVAHSNECPTVERLKMLADERLY--KSKKNG 435 ++ I ++ S+G+ + T + + AD LY K K+NG Sbjct: 244 LKYKDDLIKVTVSVGLTQHKQGDTFDEIIKRADHALYQAKVKRNG 288 >UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WUF6_COMTE Length = 373 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/163 (36%), Positives = 87/163 (53%), Gaps = 18/163 (11%) Query: 293 NSAFLDDLTKAMGRKSFDEDLKAL----PEKGGYLC--LFDVDKFKNINDTFGHLLGDEV 346 N+A DDLT R++F+E + + G LC LFD+D FK INDT GH GD+V Sbjct: 199 NAARTDDLTGVNNRRAFNEKAETMFAYTRRYGVPLCALLFDIDHFKQINDTHGHAAGDKV 258 Query: 347 LMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI------ 400 L VV+ +KS + + R GG+EF V+ G ++E + I E + V +I Sbjct: 259 LQAVVRQIKSALR-EADLCGRLGGEEFGVLLAGTNMQEAVQI-AERIRLAVQAIKEPVND 316 Query: 401 ---NLSTSIGVAHSNE-CPTVERLKMLADERLYKSKKNGRAQI 439 ++ S+GVA ++ C V L AD +Y++K NGR Q+ Sbjct: 317 TTLQVTISVGVAEADSACADVSTLLKQADAAMYRAKSNGRNQV 359 >UniRef50_UPI0001BC39B0 response regulator PleD n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC39B0 Length = 435 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 16/173 (9%) Query: 281 SAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE---KGG---YLCLFDVDKFKNI 334 + A V S+ N D LT R+ +++LK L E K G L + D+D FK + Sbjct: 262 AKASVNMQRSLRNLIVKDSLTDLYNRRYCNQNLKNLSEQYIKTGEPYTLAIADIDFFKKV 321 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI-- 392 NDT+GH GDEVL+ V +I+K + KG R+GG+EF ++YTG +E L+ L+ + Sbjct: 322 NDTYGHTAGDEVLVSVAQIMKKSMA-GKGFAARWGGEEFLLVYTGCDMETTLTYLEMLVE 380 Query: 393 ------VHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 V + I ++ SIGVA N +V+++ AD RLY +KK GR ++ Sbjct: 381 AIREMCVEYDDKVIKITISIGVATGN-GDSVDKVLCTADNRLYHAKKEGRDRV 432 >UniRef50_A8FVW6 Conserved hypothetical GGDEF family protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FVW6_SHESH Length = 413 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 37/204 (18%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNS----AFLDDLTKAMGRKSFDEDLKALPEKGGY-LC 324 F + L L S A + L S+ NS AF+D LT+ GR+S + ++K L G Y + Sbjct: 209 FNQALMPALTASMAAILLLISIINSSHELAFIDQLTEVPGRRSLEIEIKHL--SGLYTIA 266 Query: 325 LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEE 384 + D+D FK+ NDTFGH GDEVL V +++ +G+++R+GG+EF +I+ G + Sbjct: 267 MIDIDHFKHFNDTFGHRTGDEVLRLVAQLMNQN--KGRGRIFRYGGEEFTIIFKGKNANQ 324 Query: 385 LLSILKEIVH-----------------FQVG-----------SINLSTSIGVAHSNECPT 416 + L + VG S+N++ SIGVA S Sbjct: 325 CMPYLNSLRTRVAEYDLKIRDHTSRPVMGVGLKAEMEKANNESVNITISIGVADSVSETI 384 Query: 417 VERLKMLADERLYKSKKNGRAQIS 440 E + AD+ LY++K GR +++ Sbjct: 385 PENVMKAADKALYRAKNGGRNRVT 408 >UniRef50_C9PKI7 GGDEF domain protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PKI7_VIBFU Length = 473 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 90/158 (56%), Gaps = 9/158 (5%) Query: 291 MYNSAFLDDLTKAMGRKSFDEDL-KALPEKGG-YLCLFDVDKFKNINDTFGHLLGDEVLM 348 M + LD+LT A+ R++FD+DL AL ++GG L L D+D FK INDTFGH GD+VL Sbjct: 307 MASRVLLDELTGALNRRAFDKDLASALSDEGGTLLALIDIDNFKRINDTFGHQCGDDVLR 366 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH------FQVGSINL 402 + KS + + YR+GG+EFA+++ G + ++L H ++ G ++ Sbjct: 367 AFAAMAKSYFDHIQVRSYRYGGEEFAILFRGISAARAHALLDNFRHSFASRAWREGMPSI 426 Query: 403 STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + S G+ S + T+ D+ LY +K++G+ I+ Sbjct: 427 TFSAGLK-SWDGETLPEFLSAVDQLLYHAKQSGKNNIN 463 >UniRef50_Q8D4A5 FOG: GGDEF domain n=3 Tax=Vibrio vulnificus RepID=Q8D4A5_VIBVU Length = 357 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 98/187 (52%), Gaps = 21/187 (11%) Query: 272 RVLDGGLFFSAADVKK---LYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY------ 322 RVL+ + AA V K + M A +D LT A+ R++F E + +K + Sbjct: 165 RVLETLANWVAAQVHKHQQINKMIELAHIDPLTGALNRRAFVEATYFINDKPRHYDHHTA 224 Query: 323 LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL 382 L + D+DKFK IND FGH GD+VLM++ LK QI D + RFGG+EFA++ Sbjct: 225 LLMIDLDKFKEINDQFGHPAGDKVLMQIAATLKKQIRSDD-LLARFGGEEFAILLHHVNA 283 Query: 383 EELLSILK---------EIVHFQVGSINLSTSIGVA-HSNECPTVERLKMLADERLYKSK 432 EE +++ + I H Q I + SIG+A S+ E L LAD LY +K Sbjct: 284 EEAMTLAETLRVTVEQLTIEHHQ-HRIQCTVSIGIALPSSPNQGFEELMQLADNALYVAK 342 Query: 433 KNGRAQI 439 ++GR QI Sbjct: 343 RSGRNQI 349 >UniRef50_C9PIY1 GGDEF family protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PIY1_VIBFU Length = 478 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 88/168 (52%), Gaps = 18/168 (10%) Query: 281 SAADVKKLYSMYNSAF-LDDLTKAMGRKSFDEDLKALPE--KGGY-LCLFDVDKFKNIND 336 S +++ Y+ ++ LD LT R++FD DL A+ E + Y L L DVDKFK++ND Sbjct: 311 SLTTIEQQYNAHHQQLRLDTLTGIQNRRAFDLDLAAMAENQQSPYALLLIDVDKFKHVND 370 Query: 337 TFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT-------GGTLEEL-LSI 388 T+GH GD VL +V ++L + D +YR GGDEFA + G L L L + Sbjct: 371 TWGHQFGDNVLARVAQVLTKNL--DTHSIYRIGGDEFAALVPVNDDAPLGEQLNRLVLDM 428 Query: 389 LKEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 + Q + LS + + + C V AD+ LY+SK+NGR Sbjct: 429 RHQKWREQGCHVTLSIGVSIGPNTPCELVNH----ADKALYRSKENGR 472 >UniRef50_Q2BMX5 GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMX5_9GAMM Length = 344 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 91/171 (53%), Gaps = 19/171 (11%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL-----PEKGGYLCLFDVDKFKNINDTFGH 340 ++L A +D LT R++FD +L + E L L D+D FK NDT+GH Sbjct: 170 EELNKTRQDARVDPLTNLFNRRAFDAELAQVVGLNGSEFTSSLVLVDIDHFKKFNDTYGH 229 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI 400 L+GD+VL V K+LK I ++ RFGG+EFAV+ G + E+ I E V ++ +I Sbjct: 230 LMGDKVLQYVGKLLKD-ICLEPMLPVRFGGEEFAVLMPGTSKEQAFEI-AEKVRLKIQAI 287 Query: 401 ------------NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 +++ S GV+ + TVE+L D+ LY++K NGR Q+ Sbjct: 288 RIKQKKSGDIISSITASFGVSQLTDAETVEQLIERTDQALYQAKNNGRNQV 338 >UniRef50_B9Z2F9 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z2F9_9NEIS Length = 408 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 14/164 (8%) Query: 285 VKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY-LCLFDVDKFKNINDTFGHLLG 343 V+ L ++ + A D LT R+ E ++ + +G Y + + D+D FK IND FGH +G Sbjct: 247 VENLMTLEHLAHADPLTGLSNRRHLFEQVQKI--RGAYGIAIIDIDHFKQINDGFGHDVG 304 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT-------GGTLEELLS-ILKEIVHF 395 D V+ + L+ P + V RFGG+EF V+ LEEL + +E V Sbjct: 305 DVVIQHLADRLREHFP--RAIVARFGGEEFVVLMKRDAAHPLAQRLEELRQEVEREEVDS 362 Query: 396 QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 G++ + SIG+A + P + L LADERLYK+K+NGR ++ Sbjct: 363 HKGTVRYTISIGMAAAT-APDIRELLRLADERLYKAKQNGRNRV 405 >UniRef50_A8FHG3 Possible diguanylate cyclase n=2 Tax=Bacillus pumilus RepID=A8FHG3_BACP2 Length = 529 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 13/157 (8%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEKGGY---LCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 A++D LT R SF E + + E+ + LFD+D FK INDT GH +GDE L VV Sbjct: 360 AYIDGLTNIFNRSSFIERTQMILEEDAQDTAVMLFDIDFFKQINDTHGHHIGDEALRHVV 419 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH-FQVG-------SINLS 403 I + + +D R+GG+EFA+ + EE I + I H F++ + ++ Sbjct: 420 TICQQHLQMDD-LFGRYGGEEFAICLPHHSFEEACHIAERIRHSFEMSFFENEEEKVRVT 478 Query: 404 TSIGVAHSNECPTV-ERLKMLADERLYKSKKNGRAQI 439 S G+AH+ P V E L AD+ LY SK+ GR +I Sbjct: 479 ASFGIAHTAYDPNVLETLLFEADQALYMSKRQGRNRI 515 >UniRef50_C1DBE5 GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBE5_LARHH Length = 527 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 58/147 (39%), Positives = 79/147 (53%), Gaps = 10/147 (6%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGG--YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILK 355 D LT A+ R +F+ DL + GG L LFDVD FK +ND FGH GD VL ++V L Sbjct: 369 DCLTGALTRHAFNRDLAGCWQSGGDFGLMLFDVDHFKGLNDRFGHPFGDAVLQRIVARLD 428 Query: 356 S-QIPVDKGKVYRFGGDEFAVIYTGGTLEE--LLSILKEIVHFQVGSIN--LSTSIGVAH 410 S PV YR GGDEFA++ G + + + L+ + + ++ +S SIG Sbjct: 429 SLPWPV---ACYRLGGDEFALVLEPGIGQASFVHAFLRAVAEMEWREVDASVSISIGGVL 485 Query: 411 SNECPTVERLKMLADERLYKSKKNGRA 437 +E + E L LAD RLY K+ GR Sbjct: 486 RHEADSQEALIALADRRLYACKRRGRG 512 >UniRef50_B9R667 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R667_9RHOB Length = 498 Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 83/163 (50%), Gaps = 18/163 (11%) Query: 291 MYNSAFLDDLTKAMGRKSFDEDLKALPEKGG-----YLCLFDVDKFKNINDTFGHLLGDE 345 + + A D LT R SF++ L AL K L FD+D+FK INDT GH GDE Sbjct: 321 LAHQANTDALTNLGNRWSFEQTLDALSAKADGTKEFALVCFDLDRFKTINDTLGHETGDE 380 Query: 346 VLMKVVKILKS-QIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI-------VHFQV 397 VL V + L S P D KV+R GGDEF ++Y E +L++ KE V Sbjct: 381 VLKYVGETLSSLTYPQD--KVFRLGGDEFVIVYGLTDRERVLAVAKEAIAILSQRVTLNG 438 Query: 398 GSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 S + S G+A+S E + R AD LY SKK GR Q++ Sbjct: 439 HSCHFGASAGIAYSTEPVNLLR---RADTALYASKKKGRGQVT 478 >UniRef50_C6B9M0 Diguanylate cyclase n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=C6B9M0_RHILS Length = 551 Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 88/158 (55%), Gaps = 10/158 (6%) Query: 291 MYNSAFLDDLTKAMGRKSFDEDLKAL-PEKGGY-LCLFDVDKFKNINDTFGHLLGDEVLM 348 + N+ +LD LT RK D KAL EK Y + + DVD FK+IND F H++GD VL Sbjct: 393 LANAVYLDALTGLYNRKYLDSRFKALTSEKRPYSIAMLDVDHFKSINDDFSHMIGDRVLS 452 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT------LEELLSILKEIVHFQV-GSIN 401 + IL+SQ+ V + RFGG+EF V++ G E L S ++ ++ ++ Sbjct: 453 AIGTILRSQLRVTDQAI-RFGGEEFVVLFAGAPRGAADLCERLRSAIERWDWSEICNGLH 511 Query: 402 LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ SIGVA + + + +AD+ LY +KK GR ++ Sbjct: 512 VTISIGVAGTLSAKSPNEILAIADQNLYAAKKTGRNRV 549 >UniRef50_D0Z364 Hypothetical GGDEF family protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z364_LISDA Length = 433 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 100/205 (48%), Gaps = 37/205 (18%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNSA----FLDDLTKAMGRKSFDEDLKALPEKGGYLCL 325 F+ + +S A + L S+ S ++D LT GR++ D +LK L + L + Sbjct: 210 FDNPFISSMSYSCAAILLLSSLITSTHELVYIDPLTTIPGRRALDTELKYL-GRTYTLAM 268 Query: 326 FDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL 385 DVD FK+ ND +GH GDEVL V +I SQ GKV+R+GG+EF +++ G + E+ Sbjct: 269 MDVDNFKDFNDLYGHETGDEVLRLVAQI--SQKISGVGKVFRYGGEEFTLLFKGKNINEV 326 Query: 386 LSIL----KEIVHFQV--------------------------GSINLSTSIGVAHSNECP 415 S L +EI + + +++++ SIG A S P Sbjct: 327 QSQLEYVREEIACYDLVLRDHDNRPLSALQGKLKRQHNDLEPNAVHITVSIGAADSYSAP 386 Query: 416 TVERLKMLADERLYKSKKNGRAQIS 440 T + LAD LY +K +GR Q+S Sbjct: 387 TPNDVLNLADIALYNAKDDGRNQVS 411 >UniRef50_A7HJP9 Diguanylate cyclase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HJP9_FERNB Length = 1195 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/155 (36%), Positives = 87/155 (56%), Gaps = 9/155 (5%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPE-KGGYLCLF--DVDKFKNINDTFGHLLGDEVLMKVV 351 A +D LT R F++ + L + K +F D+D FK INDT+GH++GD VL + Sbjct: 1037 ANIDSLTGLYNRWKFNQFINELFDTKSKEFSIFIADIDNFKKINDTYGHMVGDSVLKNIA 1096 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE--ELLSILKEIVH---FQVGSINLSTSI 406 KILK + D+G V R+GG+EF I E +L ++E + ++ ++ SI Sbjct: 1097 KILKEHVR-DEGLVARYGGEEFVGIVYKSKYEAAKLCDTIRENIEKESLKIFGFRVTISI 1155 Query: 407 GVAHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 G+A NE V L LAD+RLYK+K+ G+ ++ W Sbjct: 1156 GMADVNEKENVTELLGLADQRLYKAKEAGKNRVVW 1190 >UniRef50_A8H9R4 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8H9R4_SHEPA Length = 396 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/174 (33%), Positives = 90/174 (51%), Gaps = 29/174 (16%) Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 +N A+ D+LT R+S + +L K L + D+D FK NDT+GH +GD+VL V Sbjct: 224 HNLAYRDELTGLASRRSLNTLAHSL-NKHYCLAMVDIDHFKKFNDTYGHDVGDQVLQLVA 282 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV------------------ 393 K L S++ GKV+R+GG+EF +++T +E +L +L+EI Sbjct: 283 KKL-SKVE-GGGKVFRYGGEEFTIVFTNKNIEAVLPLLEEIRRKISQYNIVLRNQRRKNQ 340 Query: 394 --------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 H +N++ SIGVA + + E AD+ LYK+K NGR Q+ Sbjct: 341 SKLNRDEGHKTNPVVNITISIGVAEQHGETSFENTLKRADKALYKAKNNGRNQV 394 >UniRef50_C7I4T4 Diguanylate cyclase n=1 Tax=Thiomonas intermedia K12 RepID=C7I4T4_THIIN Length = 325 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 22/188 (11%) Query: 270 FERVLDGGL--FFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK---ALPEKGGYLC 324 ++R++D GL AD++ +++ +A D LT GR + + L+ +L + G +C Sbjct: 134 WDRLIDLGLDTLQGFADLEVVFAARRAA-QDPLTGLPGRAALQQRLQGEQSLVLRQGRMC 192 Query: 325 ---LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQI-PVDKGKVYRFGGDEFAVIYTGG 380 + D+D FK+IND GH GD VL ++L+ + P D VYR+GG+EF ++ G Sbjct: 193 SVVMLDIDHFKSINDQHGHQAGDRVLAAFARLLRGALRPYD--GVYRYGGEEFVLVLPGA 250 Query: 381 TLEELLSIL---------KEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKS 431 T+ + + I+ + +V Q G +++ S GVA NE + L+ AD LY + Sbjct: 251 TVAQAVQIIDRMRQTIVERPLVQIQTGGLHIRFSAGVAALNERAIAQTLR-CADAALYHA 309 Query: 432 KKNGRAQI 439 K GR Q+ Sbjct: 310 KAEGRDQV 317 >UniRef50_A8GCJ7 Diguanylate cyclase n=2 Tax=Serratia RepID=A8GCJ7_SERP5 Length = 568 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 88/158 (55%), Gaps = 14/158 (8%) Query: 294 SAFLDDLTKAMGRKSFDEDLKALPEKGGYL--CLFDVDKFKNINDTFGHLLGDEVLMKVV 351 S+FLD LT R+ F + ++L L CL D+D FKN+ND +GH +GD+VL+ Sbjct: 404 SSFLDPLTNIYNRRKFFRECESLAASSYPLAFCLIDIDNFKNLNDNYGHHIGDQVLVAFG 463 Query: 352 KILKSQIPVDKGKVY-RFGGDEFAVIYTGGTLE---ELLSILKEIVH-FQV-----GSIN 401 K+L+S ++ R+GG+EFAVI TLE E++S L+E H F + + Sbjct: 464 KLLQS--TFRSSDIFCRYGGEEFAVILGNCTLENAREVISKLRERTHQFTLTLADGQKVR 521 Query: 402 LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 +TS G+A ++ + ADE LY SK NG+ +I Sbjct: 522 FTTSCGIAQVSDIRLLPTAIKQADEALYFSKNNGKDRI 559 >UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q525_NITSB Length = 350 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/171 (36%), Positives = 91/171 (53%), Gaps = 26/171 (15%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDED----LKALPEKGGY---LCLFDVDKFKNINDTF 338 ++L N A D LT+ R+ F+E LK E G L + D+D FK INDT+ Sbjct: 180 RELRDTKNKAEFDYLTELFNRRKFEEYFHKLLKEFNEGEGKPFSLIILDIDDFKQINDTY 239 Query: 339 GHLLGDEVLMKVVKILKS-----QIPVDKGKVYRFGGDEFAVIYTGGTLEELLSI---LK 390 GHLLGDEVL + ++K+ IP R GG+EFA++ L+E +I L+ Sbjct: 240 GHLLGDEVLKNLSSLIKTFLHSAHIPA------RIGGEEFAILLPETPLDEAKTIAERLR 293 Query: 391 EIVHFQV-----GSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 + V + G +N + SIGVA + T++ L ADE LY++K+NG+ Sbjct: 294 KTVENRTIPIAEGDLNFTVSIGVAQVQKGDTMDSLLKRADEALYEAKRNGK 344 >UniRef50_A8VR65 Putative diguanylate cyclase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VR65_9BACI Length = 341 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 7/144 (4%) Query: 298 DDLTKAMGRKSFDEDLKAL--PEKGGY-LCLFDVDKFKNINDTFGHLLGDEVLMKVVKIL 354 D LT R++F+E+++ + ++ Y L L D+D+FK +ND GH GDE L ++L Sbjct: 183 DPLTGLYNRRAFNEEIEQIINHKRTSYCLALMDLDRFKRLNDRHGHQTGDEFLKLFSELL 242 Query: 355 KSQIPVDKGKVYRFGGDEFAVIYTGGT--LEELLSILKEIVHFQVGSI--NLSTSIGVAH 410 ++ P D + R+GGDEFA++YTGG LEE LS +K +V + + S GV Sbjct: 243 RTHFPEDNQIISRWGGDEFAILYTGGPDELEERLSAVKTAFTEEVEKVEPGVGVSYGVVP 302 Query: 411 SNECPTVERLKMLADERLYKSKKN 434 + E L + AD RLY++K+N Sbjct: 303 VDGGEHPEALLIKADTRLYEAKEN 326 >UniRef50_B7VMS0 Sensory transduction/ GGDEF family protein n=2 Tax=Vibrio RepID=B7VMS0_VIBSL Length = 430 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 85/161 (52%), Gaps = 14/161 (8%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLC--LFDVDKFKNINDTFGHLLGDEVL 347 + + A D++T + R++ E L+ YL L D+D FK+INDT+GH++GDEV+ Sbjct: 260 QLVHQANYDEMTDLLNRRAIYEWLREHMFSKNYLVCMLLDIDDFKSINDTYGHMVGDEVI 319 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------VHFQVGS-- 399 + I K G R+GG+EF + LE L + +EI V F+VG Sbjct: 320 CALASITKRNAEKVGGVAGRWGGEEFIIFIPNTPLETALEVSEEIRQQFNQVEFKVGEQI 379 Query: 400 -INLSTSIGVAHSNECP---TVERLKMLADERLYKSKKNGR 436 N S SIG++ S C T++ L L D+ LY++K NG+ Sbjct: 380 RFNSSVSIGISDSRACEDGVTIDALVNLTDQSLYRAKANGK 420 >UniRef50_Q488E6 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488E6_COLP3 Length = 333 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 13/162 (8%) Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCL-FDVDKFKNINDTFGHLLGDE 345 KL S A +D LT + R+ DE L+ L + L D+D FK +NDTFGH +GD+ Sbjct: 167 KLASSRQEALVDSLTGLLNRRGCDEKLQNLSHADTHSSLAIDIDHFKKVNDTFGHFIGDK 226 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------VHFQVGS 399 V+ ++ K ++S I ++ RFGG+EF V+ T L E +I ++I + + Sbjct: 227 VIQRIAKTIQSHIG-EQDLAVRFGGEEFVVVMTNTPLAEAKNIAEKIRIGISKMRLKQRD 285 Query: 400 IN-----LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 N +S SIG+A ++ L AD LY++K +GR Sbjct: 286 TNTFLPPISVSIGIAQNDNISEWTTLFEQADTALYQAKNSGR 327 >UniRef50_Q2W9E2 Predicted signal transduction protein n=2 Tax=Magnetospirillum RepID=Q2W9E2_MAGSA Length = 679 Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 23/206 (11%) Query: 250 LVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSF 309 L RRV +GI+ + A ++++F ++L + + + + + D LT+ R+ F Sbjct: 228 LSRRVETKGIIAEVADLSDYFNKLLRTVEEYQ-------HRLEDLSIRDPLTRLYNRRKF 280 Query: 310 DE----DLKALPEKGGYLCL--FDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKG 363 DE ++ G C+ D+D FKNINDTFGH +GD VL ++ +L ++ Sbjct: 281 DEFLDHEIDRAQRHGHPFCVAQIDLDDFKNINDTFGHPIGDLVLKELASVLYREVR-RTD 339 Query: 364 KVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIG-VAHSNEC 414 V R G DEFAV+ T+EE ++ +++ + VG + ++ SIG V + + Sbjct: 340 VVARVGADEFAVLLPETTMEEGVAAAEKLRQAVADCQLGLPVGGVRITASIGLVGYPDNA 399 Query: 415 PTVERLKMLADERLYKSKKNGRAQIS 440 ++L + AD +YK+K++G+ Q++ Sbjct: 400 DDAQKLAIAADVAIYKAKRSGKNQVA 425 >UniRef50_A4BI17 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BI17_9GAMM Length = 606 Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 16/158 (10%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LT R+S D KAL E+ L + D+D FK IND FGH +GDE L+ V Sbjct: 440 DHLTGLYNRQSLDNRTKALFEQAEQSDSHLSLIMMDIDHFKPINDRFGHQVGDECLVHVA 499 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSIL--------KEIVHFQVGSINLS 403 L+ K + RFGG+EF ++ ++E ++ KE V I L+ Sbjct: 500 SFLRGLNLRHKDLIARFGGEEFTIVLPDTSIEHAQHLIEDVCTRLSKETVSGSHYEIQLT 559 Query: 404 TSIGVAHS--NECPTVERLKMLADERLYKSKKNGRAQI 439 S G+A ++ P+ E L AD+ LY++K+NGR ++ Sbjct: 560 ASFGIAERVISQAPSYEELIQKADQALYQAKQNGRNRV 597 >UniRef50_A8UY33 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY33_9AQUI Length = 345 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 64/172 (37%), Positives = 92/172 (53%), Gaps = 22/172 (12%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE------KGGY---LCLFDVDKFKNIND 336 ++L + A +D LT R+SF+ +AL E K GY + + D+D FK IND Sbjct: 176 EELRRVKEEANIDPLTGLRNRRSFE---RALSEFFRDFKKFGYPFSVIMIDLDNFKQIND 232 Query: 337 TFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI---- 392 T+GHL GD+VL ++ IL++ + K R GG+EF +I G T EE L + + + Sbjct: 233 TYGHLAGDKVLKEIGNILRNYLRA-KDVPARTGGEEFTIILPGITREEALMVAERLRKVI 291 Query: 393 ----VHFQVGSINLSTSIGVAHSNE-CPTVERLKMLADERLYKSKKNGRAQI 439 V + IN + S GVA NE T E L LADE LYK+K+ G+ + Sbjct: 292 ANYTVEHEDKKINPTASFGVAEVNEQVETPEDLLRLADENLYKAKRRGKNTV 343 >UniRef50_Q7UJ25 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UJ25_RHOBA Length = 585 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDL---KAL-PEKGGYLCLFDVDKFKNINDTFGHL 341 ++L S A D LT+ R +FDE L AL P + G L + DVD FK NDT GH Sbjct: 145 QQLQSAEQKAQTDALTQIFNRGAFDEHLLRRHALGPTRAGVLAVLDVDHFKKFNDTHGHR 204 Query: 342 LGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------V 393 GDEVL V ++L +++ G V RFGG+EF ++ TL E + ++++ V Sbjct: 205 AGDEVLRVVSQLLDARL-QPHGMVARFGGEEFVMLLHDKTLAEAVELIEQTRVAIGTREV 263 Query: 394 HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 F+ + + S+G+ + + DE LY+SK+ GR Sbjct: 264 RFEGKCLKVKASVGIGALEPQQSPQEWLQRVDEALYRSKEVGR 306 >UniRef50_A9FJ67 FHA and GGDEF domain protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FJ67_SORC5 Length = 310 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 89/166 (53%), Gaps = 17/166 (10%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKA----LPEKGGYLCL--FDVDKFKNINDTFGHLLG 343 MY++A D LTKA +K F + L+ G +L L FDVD FK INDTFGHL G Sbjct: 138 QMYDAALRDALTKAFNKKYFLDRLETEVSYARRHGAHLSLLMFDVDHFKRINDTFGHLAG 197 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTG------GTLEELLSILKEIVHFQV 397 D VL ++ KI + + R+GG+EF ++ G G L E L +L E F+ Sbjct: 198 DYVLARIAKIASHTVRTED-VFARYGGEEFGILCRGVGLENAGILGERLRLLIEGSVFEH 256 Query: 398 GSINLST--SIGVAHSNECPTVERLKML--ADERLYKSKKNGRAQI 439 + + T S+GVA E ++++ ADE LY++K+ GR ++ Sbjct: 257 EGVRMPTTISVGVAAHPELAVQTGMELIAAADEALYEAKRTGRNRV 302 >UniRef50_A9C0B6 Diguanylate cyclase n=3 Tax=cellular organisms RepID=A9C0B6_DELAS Length = 356 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 84/166 (50%), Gaps = 27/166 (16%) Query: 298 DDLTKAMGRKSFDEDL---------KALPE------KGGYLCLFDVDKFKNINDTFGHLL 342 D LT + RK+FDE A+P G +L D+D FK IND FGHL Sbjct: 173 DALTGLLNRKTFDEQFLRLSLQEAPMAMPGVATEDVPGQWLAAIDIDHFKRINDRFGHLY 232 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH-------F 395 GDEVL+ V IL+S K +V+RFGG+EF V+ +L L+ + H Sbjct: 233 GDEVLILVANILRSCFDA-KDRVFRFGGEEFVVLLRSVSLVNARKALERLRHDVESYEFP 291 Query: 396 QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 QVG I +ST G A VE L AD+ LY +K++GR Q +W Sbjct: 292 QVGRITVST--GFAAMGTGAPVEVLGH-ADQALYHAKEHGRNQ-TW 333 >UniRef50_Q12S31 Diguanylate cyclase n=17 Tax=Shewanella RepID=Q12S31_SHEDO Length = 641 Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 22/162 (13%) Query: 297 LDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKV 350 LD LT R +FD+ L A + + + D+DKFK+IND FGHL GD + + Sbjct: 475 LDSLTGVKNRNAFDKRLVAEGRISRRQQTPMAILMLDIDKFKSINDEFGHLGGDHCIQSI 534 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINL-------- 402 K+L Q+ V RFGG+EFA+I L+ + I+ E V + + L Sbjct: 535 AKVLTEQLKRPTDLVSRFGGEEFAIILPNTDLDGAM-IVAETVRASIDELQLVWDEKPMK 593 Query: 403 -STSIGVA----HSNECPTVERLKMLADERLYKSKKNGRAQI 439 S S+GV+ S+E P +E L+ LAD+ LY++K+NGR +I Sbjct: 594 ISASLGVSAAVIESDEHP-IELLE-LADKALYQAKRNGRNRI 633 >UniRef50_D1B521 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B521_SULD5 Length = 477 Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 63/156 (40%), Positives = 86/156 (55%), Gaps = 15/156 (9%) Query: 298 DDLTKAMGRKSFDEDLK---ALPEKGGY---LCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LTK R+ F+E + + KG L L DVD FK +NDTFGHL+GDEVL+++ Sbjct: 320 DALTKLYNRREFNEQFERFSKMHHKGQTSLALMLIDVDDFKEVNDTFGHLVGDEVLVRLA 379 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTG---GTLEELLSILKE-IVHFQV--GSIN--LS 403 ++LK + V R+GG+EFA++ G T EE+ IL E I H V G + LS Sbjct: 380 QLLKENVR-SSDIVARWGGEEFAILLVGVCIETTEEIAQILCERIKHDAVLQGILGRALS 438 Query: 404 TSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 SIGV N + + L D LY +KK G+ Q+ Sbjct: 439 VSIGVGMFNHLESQDGLVHKVDNALYAAKKAGKDQV 474 >UniRef50_B1KD38 Diguanylate cyclase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KD38_SHEWM Length = 328 Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 12/156 (7%) Query: 295 AFLDDLTKA---MGRKSFDEDLKA----LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVL 347 AFL LTK + +++ D L L K +LC+FD+DKFK INDTFGHL GDE+L Sbjct: 150 AFLPRLTKVAKLIKQEAIDCALDPASCDLSAKRYWLCIFDIDKFKVINDTFGHLYGDEIL 209 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH----FQVGSINLS 403 + +VK++K+ + ++RFGGDEF VI + E+L + + H + ++ Sbjct: 210 IDLVKVMKATFN-ELDSLFRFGGDEFVVILSKREKAEMLHLCESFSHKLSIHHGREVKVT 268 Query: 404 TSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 S+G+ N L + AD+ LY K+ GR ++ Sbjct: 269 ISMGIIEINSIEEPSELLVKADKALYYIKETGRDRV 304 >UniRef50_C6CYU5 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CYU5_PAESJ Length = 296 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 7/127 (5%) Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT-- 378 G + + D+D FK INDTFGHL+GD+VL + I++ I + +RFGGDEF V+ Sbjct: 168 GAMLMIDMDNFKIINDTFGHLVGDQVLQAIASIIQKAISPENDLAFRFGGDEFLVLLQQE 227 Query: 379 GGTLEELLSILKEIVHFQVGSI-----NLSTSIGVAHSNECPTVERLKMLADERLYKSKK 433 G +E I++ + +GS+ S SIG+ S++ + E++ AD L +SK+ Sbjct: 228 QGAMETAQQIIRTVNELAIGSLVEQSAKASVSIGITKSSDHYSFEQIIGFADRALLRSKQ 287 Query: 434 NGRAQIS 440 +G+ QI+ Sbjct: 288 SGKNQIT 294 >UniRef50_D1B3P8 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B3P8_SULD5 Length = 405 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 90/339 (26%), Positives = 150/339 (44%), Gaps = 50/339 (14%) Query: 129 NTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKP-- 186 NT F GK F +++ P++ + L L+ L S +F L ++G Sbjct: 80 NTFFTHLSGKAF-WHIAPLSCAIGYLLLYALQERGLFS----------LFGLLRSGIALG 128 Query: 187 VTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGAS 246 + G Y N + + LPT L+ D + + + F LV+++ A Sbjct: 129 ILGISYYGLNHFSSNLHTALNTPLLPTFLHKITQASDFIFILSIIALLFIFLVSLLFEAQ 188 Query: 247 C----LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTK 302 +++ ++ +V +EA + L L +A V Y M A++D LT Sbjct: 189 TQKAPFWMLTSLMFSFLVMQEA--QSFILFSLLSALIAMSALVHDAYKM---AYIDTLTG 243 Query: 303 AMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDK 362 R++ +E L + + + D+D FK NDTFGH +GD+VL V K L + Sbjct: 244 IPSRRALEERFLRLGSRY-VIAMVDIDFFKKFNDTFGHDIGDDVLKLVAKELNHV--KNG 300 Query: 363 GKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--FQVGSI-------------------- 400 GK +R+GG+EF ++++G EE + L+E+ F+ G + Sbjct: 301 GKAFRYGGEEFTILFSGKKKEECIMALEEVREAIFRRGFVIRDKNRPAKSSKATKTNPSP 360 Query: 401 ---NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 LS SIGVA S + T + + AD+ LYK+K++GR Sbjct: 361 KKERLSVSIGVALSQKGKTPQEIIKKADDALYKAKESGR 399 >UniRef50_B9L7S4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nautilia profundicola AmH RepID=B9L7S4_NAUPA Length = 705 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 85/148 (57%), Gaps = 12/148 (8%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQ 357 D LT R FD+D+K+L + L L ++D+FK+IND +G +GD+VL KV K+L++ Sbjct: 308 DKLTGLYNRNKFDDDVKSLNK--PVLVLINIDRFKHINDYYGSKIGDKVLKKVAKVLQTT 365 Query: 358 IPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF------QVGSINLSTSIGVAHS 411 IPV +YR G D+F ++Y + ++ ++I+ F ++ +I ++ S+ + S Sbjct: 366 IPVINANLYRLGADDFGIMYEYENYPNVQTLARKIIEFFEKNEIEIDNIKINISVSIGIS 425 Query: 412 NECPTVERLKMLADERLYKSKKNGRAQI 439 + P +E AD L + KK+ R +I Sbjct: 426 TKQPLLEN----ADIALKQIKKSFRKKI 449 >UniRef50_D0Z4N2 GGDEF family protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z4N2_LISDA Length = 532 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/153 (35%), Positives = 87/153 (56%), Gaps = 13/153 (8%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGGY-LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKS 356 D LT+ + R++F L E + L FD+DKFK+INDT+GH+ GDE L+ V ++++ Sbjct: 380 DSLTRLLNRRAFRLTLPLWIESKQFTLVGFDIDKFKSINDTYGHIAGDEALIHVTQLVQG 439 Query: 357 QIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIG- 407 + + ++YR GGDEFA++ ++ +L + + +Q I + SIG Sbjct: 440 LLQKHE-QLYRLGGDEFAILMPETDTTKIYEVLNRVRSAVEHSPLIYQGAKIYCTLSIGA 498 Query: 408 VAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 V HSN+ E L +D ++YKSK+ GR +IS Sbjct: 499 VVHSNQ--EAEALIYQSDLQMYKSKQQGRNRIS 529 >UniRef50_Q1YM41 Conserved hypothetical membrane protein with GGDEF domain n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YM41_MOBAS Length = 390 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/177 (35%), Positives = 92/177 (51%), Gaps = 14/177 (7%) Query: 276 GGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL-KALPEKGGY-LCLFDVDKFKN 333 G S A + + ++A D LT R++F++ L KAL ++G + L +FD+D FK+ Sbjct: 211 GAFVLSVAYERMARDLRHAAMHDALTGLPNRRAFEQRLEKALQDRGHFALVVFDLDHFKS 270 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 IND +GH GDE L + +L + + V R GG+EFA I G T E +L + V Sbjct: 271 INDRYGHAAGDEALRRCA-LLCPSVLRQQDFVARVGGEEFAAILPGVTPTEAF-MLTDGV 328 Query: 394 HFQVG---------SINLSTSIGVAHSNEC-PTVERLKMLADERLYKSKKNGRAQIS 440 V S L+ S G+AHS E + +RL AD LY++K GR +I+ Sbjct: 329 RSTVAATRIAADDVSFGLTLSAGIAHSAEGEASFDRLMRAADANLYRAKNGGRNRIA 385 >UniRef50_Q1ZSN4 GGDEF family protein n=1 Tax=Photobacterium angustum S14 RepID=Q1ZSN4_PHOAS Length = 530 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 11/149 (7%) Query: 298 DDLTKAMGRKSFDEDLKAL--PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILK 355 D LTK R+SF++ + + EK L D+DKFK+IND +GH+ GD+ L+ V I+ Sbjct: 376 DVLTKLRNRRSFNQYIDKMFNREKPFALVSIDIDKFKSINDNYGHVFGDQALIHVATIVH 435 Query: 356 SQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSINLSTSIG 407 + + K++R GGDEF++I + E+ +L +I H ++ I S SIG Sbjct: 436 DLL-AKEDKLFRLGGDEFSIITQQINVPEIEQMLFKIFHAVNNTILQYKGNEIYCSLSIG 494 Query: 408 VAHSNECPTVERLKMLADERLYKSKKNGR 436 A S++ VE L D LY+SKK GR Sbjct: 495 AAISHDDDDVETLMTRTDNALYESKKKGR 523 >UniRef50_A8FYV4 GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYV4_SHESH Length = 325 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 17/159 (10%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGG------------YLCLFDVDKFKNINDTFGHLLGDE 345 D LT + RK+F+ LK E +LC+FD+DKFK INDTFGHL GDE Sbjct: 145 DVLTGLLNRKAFESRLKLASETSYQNSGLDDQRLSYWLCIFDIDKFKLINDTFGHLYGDE 204 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLS----ILKEIVHFQVGSIN 401 +L+ +V ++++ G ++RFGGDEF ++ T + + + E+ F +I Sbjct: 205 ILLDLVTVMRNVFSESDG-MFRFGGDEFVLLIAPDTKQRVRAKCERFCNELYEFHDQNIQ 263 Query: 402 LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 ++ S+G+ L AD+ LY K+NGR +I Sbjct: 264 VTLSMGMTEVLPGEQASGLLEKADQALYYVKENGRNRIE 302 >UniRef50_Q0G275 Diguanylate cyclase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G275_9RHIZ Length = 376 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 10/159 (6%) Query: 291 MYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLF-DVDKFKNINDTFGHLLGDEVLMK 349 + + A D LT R++ DE L ++P+ LF D+D FK +NDTFGH GD +L + Sbjct: 207 LRDCALTDALTGLPNRRALDEALDSVPKGSDVAILFIDLDGFKPVNDTFGHNAGDALLRE 266 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGG-------TLEELLSILKEIVHFQVGSINL 402 + L S I V G V R GGDEF V+ G T E + + + F G + Sbjct: 267 IAHTLSSSISV-AGFVARCGGDEFVVVLRDGNARFVEETAESIRKRISRLYDFDGGCAEI 325 Query: 403 STSIGVAHSNECPT-VERLKMLADERLYKSKKNGRAQIS 440 SIG+A + + L ADE +Y +K+ GR +I+ Sbjct: 326 GASIGIASGTAGQSNLASLVREADEAMYDAKRAGRGRIA 364 >UniRef50_Q2B6Y4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B6Y4_9BACI Length = 532 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 82/161 (50%), Gaps = 17/161 (10%) Query: 295 AFLDDLTKAMGRKSFDED----LKALPEKGGYLC--LFDVDKFKNINDTFGHLLGDEVLM 348 AF D LT R F E LK GG + LFD+D FKNIND +GHL GDE L Sbjct: 365 AFKDGLTGIYNRTYFIEQSGRLLKEAEAAGGTMSVILFDIDYFKNINDQYGHLQGDEALR 424 Query: 349 KVVKILKSQIPVDKGKVY-RFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGS 399 + ++ S + G ++ R+GG+EF + G LE ++I + + G Sbjct: 425 HIARVSGSLL--GGGSIFARYGGEEFVICLPGADLESAADQAEKIRAGIEEVFLPSETGM 482 Query: 400 INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 I+L+ S G A + T+ERL AD LY+SK GR +++ Sbjct: 483 ISLTASFGAAEAAPGMTLERLLHNADTALYQSKNGGRNRVT 523 >UniRef50_A9FZW1 FHA domain protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FZW1_SORC5 Length = 299 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/179 (36%), Positives = 97/179 (54%), Gaps = 20/179 (11%) Query: 279 FFSAADVKKLY--SMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDK 330 F S ADV+ Y +Y +D LT+ ++ E L+ E+ + LFD+D Sbjct: 121 FLSGADVEAQYHEEIYRMTIIDGLTQIHNKRYLYEALEREIIRGRRHERDLAILLFDIDH 180 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY-RFGGDEFAVIYTGGTLE---ELL 386 FK IND GHL GD VL +V +I++S+I D +V+ R+GG+EFA+I ++E L Sbjct: 181 FKRINDVHGHLAGDFVLKEVARIVQSRIRRD--EVFARYGGEEFAIILPETSIEGAAALG 238 Query: 387 SILKEIVH-----FQVGSINLSTSIGVAHSNECP-TVERLKMLADERLYKSKKNGRAQI 439 L++ V FQ SI ++ S+GVA E T L ADERLY +K +GR ++ Sbjct: 239 ETLRQKVAEHLFVFQADSIRVTISVGVALLQEGDRTANDLIKRADERLYHAKNSGRNRV 297 >UniRef50_O86287 Putative uncharacterized protein orfC n=1 Tax=Lactococcus lactis RepID=O86287_9LACT Length = 239 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 19/176 (10%) Query: 278 LFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY--LCLFDVDKFKNIN 335 L++ D+KK M A D LTK R F L+ L +K L + D+D FK N Sbjct: 65 LYYMINDIKK---MQKKATHDYLTKMKNRSEFQAKLEVLQKKKKIFSLAILDIDYFKVFN 121 Query: 336 DTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF 395 D+F HL+GD VL++V K+L S +K YR GG+EF++++ E+ + L++I Sbjct: 122 DSFNHLVGDLVLLEVSKVLLS-FEGNKINCYRIGGEEFSLVFEEINFVEVENKLEKI-RL 179 Query: 396 QVGSIN------------LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 V IN ++ SIGV+H +E AD+ LYK+K+NGR Q+ Sbjct: 180 AVQKINIDEMLLDGEVRGITVSIGVSHIKTFSNIENYISSADDALYKAKENGRNQL 235 >UniRef50_A3XAQ5 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Roseobacter sp. MED193 RepID=A3XAQ5_9RHOB Length = 300 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 9/149 (6%) Query: 298 DDLTKAMGRKSFDEDL-KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKS 356 D LT + R + D L A+ + G L L D+D FK++ND FGH GDE L V K L+ Sbjct: 142 DVLTGLLNRGAMDAVLASAISNRAGSLLLMDIDHFKSVNDDFGHAAGDECLRAVAKFLRQ 201 Query: 357 QIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH-FQVG------SINLSTSIGVA 409 +P ++ ++ R+GG+EF + + E+ +V F + I ++ SIGVA Sbjct: 202 VLP-EEVELARWGGEEFVALVRRQQVSEVAPFANRLVKGFSLPITGRNQPIRITFSIGVA 260 Query: 410 HSNECPTVERLKMLADERLYKSKKNGRAQ 438 + +E V+ L LAD RLY +K GRAQ Sbjct: 261 NLSEVGPVDALLKLADTRLYLAKSWGRAQ 289 >UniRef50_D2BPD8 Diguanylate cyclase with GAF sensor domain n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=D2BPD8_LACLK Length = 351 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 19/176 (10%) Query: 278 LFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY--LCLFDVDKFKNIN 335 L++ D+KK M A D LTK R F L+ L +K L + D+D FK N Sbjct: 177 LYYMINDIKK---MQKKATHDYLTKMKNRSEFQAKLEVLQKKKKIFSLAILDIDYFKLFN 233 Query: 336 DTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF 395 D+F HL+GD VL++V K+L S +K YR GG+EF++++ E+ + L++I Sbjct: 234 DSFNHLVGDLVLLEVSKVLLS-FEGNKINCYRIGGEEFSLVFEEINFVEVENKLEKI-RL 291 Query: 396 QVGSIN------------LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 V IN ++ SIGV+H +E AD+ LYK+K+NGR Q+ Sbjct: 292 AVQKINIDEMLLDGEVRCITVSIGVSHIKAFSNIENYISSADDALYKAKENGRNQL 347 >UniRef50_C6PTW3 Diguanylate cyclase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PTW3_9CLOT Length = 500 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/154 (38%), Positives = 87/154 (56%), Gaps = 9/154 (5%) Query: 282 AADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHL 341 AAD+ L YN ++L + ++ + L++L + L D+D FK +NDT GHL Sbjct: 344 AADIDSLTGAYNRRAFNNLLSTVKQEINNRSLESLG-----VLLLDIDHFKELNDTSGHL 398 Query: 342 LGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSIN 401 GD VL K+ +I+K+ V K V+RFGGDEFAV+ + E LLSI +EI ++N Sbjct: 399 AGDNVLKKLAEIMKA--AVGKRSVFRFGGDEFAVVIRNVSDERLLSIAEEIRLKGEAALN 456 Query: 402 LST-SIGVAH-SNECPTVERLKMLADERLYKSKK 433 T SIG A + +++ L AD+ LY SKK Sbjct: 457 GCTVSIGAAKFPKDTYSIDELIDFADKALYISKK 490 >UniRef50_A4G283 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G283_HERAR Length = 475 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 23/177 (12%) Query: 283 ADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK---ALPEKGGY---LCLFDVDKFKNIND 336 A++ + + D LT A R+ FDE K A+ + G+ + D+D FK +ND Sbjct: 296 ANLGRQRELEEKTHRDVLTGAHNRRYFDEAFKHEFAVASRQGWPLSVAFLDIDHFKQVND 355 Query: 337 TFGHLLGDEVLMKVVKILKSQIPVDKGK--VYRFGGDEFAVIYTGGTLEELLSILKEIVH 394 T+GH GD+ L+ + +I+ +QI +G R+GG+EF +++ G EE L +L I Sbjct: 356 TYGHAAGDKALIALSRIIATQI---RGSDIFVRYGGEEFVLLFPGTVAEEALIVLNRIRQ 412 Query: 395 --------FQVGSINLSTSIGVA-HSNE---CPTVERLKMLADERLYKSKKNGRAQI 439 + + +L+ S G+A H +E T E L AD LY +K+NGR QI Sbjct: 413 AVASYCHTYDTATFHLTISAGLAFHMDEDMKHETAEGLLRTADNALYTAKQNGRNQI 469 >UniRef50_D2TII3 Diguanylate cyclase YddV n=13 Tax=Enterobacteriaceae RepID=D2TII3_CITRO Length = 460 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 83/162 (51%), Gaps = 19/162 (11%) Query: 297 LDDLTKAMGRK----SFDEDLKALPEKGGYLCLF--DVDKFKNINDTFGHLLGDEVLMKV 350 +D LTK + R+ F ++ G L + DVDKFK INDT+GH GDE+L +V Sbjct: 297 MDVLTKLLNRRFLPTIFKREIAHANRAGTPLSILIIDVDKFKEINDTWGHNTGDEILRRV 356 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQV----------GSI 400 + + V+R+GGDEF ++ T T + L I E + +V +I Sbjct: 357 SQAFYDNVR-SSDYVFRYGGDEFIIVLTEATQADTLRI-AERIRLRVEKTKIKSPDGATI 414 Query: 401 NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS-W 441 LS SIG A N P ERL +ADE LY +K+ GR ++ W Sbjct: 415 PLSLSIGAAMFNGHPDYERLIQIADEALYTAKRQGRNRVELW 456 >UniRef50_A0XYT9 Diguanylate cyclase n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0XYT9_9GAMM Length = 319 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 29/177 (16%) Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDL--------------KALPEKGGYLCLFDVDKFK 332 +L+ ++ S LD LT + R++FD+ + +A ++ YL + D+D FK Sbjct: 134 QLWILHKSR-LDPLTGLLNRQTFDKKVMEIVTGNGFLLPREQADTKRCWYLAIVDIDLFK 192 Query: 333 NINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI 392 N+NDTFGH++GD V+ +V K++K+ ++ +R+GG+EFA+++ T + L+ L + Sbjct: 193 NVNDTFGHVVGDGVIAQVAKLIKNNFRIED-YAFRYGGEEFAIVFQSQTNTDALNALTRL 251 Query: 393 ---------VHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 H Q L+ SIG TV + AD LY SKK GR +++ Sbjct: 252 RQRVASHDFEHIQ----QLTISIGFLELQSADTVSSIVNQADMALYHSKKTGRNKVT 304 >UniRef50_C6CDM3 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech703 RepID=C6CDM3_DICDC Length = 469 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 20/160 (12%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LT + R F+E L ++ Y + L D+D FK+IND+FGH GDEVL +V Sbjct: 308 DFLTNTLSRYGFNEALTNYGKEERYRNVSVNIMLIDIDHFKHINDSFGHDCGDEVLKQVA 367 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVI---YTGGTLEELLSILKEIVH-----FQVGSINLS 403 I+K I ++G + R GG+EFAV+ Y+ L L+ ++ F + ++ Sbjct: 368 AIIKDTIN-EQGLISRIGGEEFAVVCFDYSPDAFYWLADKLRRRIYETTFMFNQSPVPVA 426 Query: 404 TSIGVAHSNE-----CPTVERLKMLADERLYKSKKNGRAQ 438 SIG+AH++ TV +L AD+ LY +K+ GR Q Sbjct: 427 ISIGLAHASSPNGDLLNTVHQLCTQADKNLYAAKRQGRNQ 466 >UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6I5_BREBN Length = 530 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 15/185 (8%) Query: 267 NNHFER---VLDGGLFFSAADVKK-LYSMYNSAFLDDLTKAMGRKSFDEDL-KALPEKGG 321 + H+ R +L + F+ ++KK + + A D LT R++ +E + K + E+ Sbjct: 341 SQHWNREAELLSRAIRFALTNIKKKTEQLTHDARTDPLTGLTNRRTLEETMQKWMAEQIP 400 Query: 322 Y-LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQI-PVDKGKVYRFGGDEFAVIYTG 379 + + + D+D+FK INDT+GH GDEVL KI+ S + P D RFGG+EF V+ + Sbjct: 401 FSIMMMDLDRFKAINDTYGHQAGDEVLRHFAKIISSSLRPEDVS--CRFGGEEFVVLVSH 458 Query: 380 GTLEELLSILKEIVHFQVGSIN-----LSTSIGVAH-SNECPTVERLKMLADERLYKSKK 433 LEE + + I N L+ S G+AH + + E L +ADE +YK+K+ Sbjct: 459 TGLEEAYQVAERIRRALETRTNPIGQRLTVSQGIAHYPSHAVSPEGLLHVADEAMYKAKR 518 Query: 434 NGRAQ 438 GR Q Sbjct: 519 AGRNQ 523 >UniRef50_Q1J3M1 Diguanylate cyclase with GAF sensor n=2 Tax=Deinococcus RepID=Q1J3M1_DEIGD Length = 531 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 7/155 (4%) Query: 288 LYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGG--YLCLFDVDKFKNINDTFGHLLGDE 345 L + A D LT +GR++F+EDL A E+G L + D+D K +ND GH GD Sbjct: 372 LEASRQEARRDALTGVLGRRAFEEDLAAWEERGQPFLLAMVDLDGLKAVNDREGHAQGDR 431 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK--EIVHFQVGSINLS 403 VL LK+++ + G VYR GGDEF ++ E LL + + QV + Sbjct: 432 VLRVFAGTLKAEV-GEAGNVYRVGGDEFVLLLATSDEEFLLEAVDVAMVAAQQVAGLQ-G 489 Query: 404 TSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 S+G A S E E L LAD R+Y+ K+ +A+ Sbjct: 490 ASVGTAQSGEA-RGEELTALADARMYEVKRRRQAR 523 >UniRef50_C6CM30 Diguanylate cyclase n=1 Tax=Dickeya zeae Ech1591 RepID=C6CM30_DICZE Length = 470 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 20/158 (12%) Query: 298 DDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LT + R F E L + + L D+D FKNIND+FGH GDE+L +V Sbjct: 309 DFLTNTLSRYGFTEALTTHGQSVKSQHDAVNIMLIDIDHFKNINDSFGHDCGDEILRQVA 368 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVI---YTGGTLEELLSILKEIVH-----FQVGSINLS 403 K+++ + +G V R GG+EFAV+ Y L L++ + F + ++ Sbjct: 369 KVIQQAVSA-QGLVSRIGGEEFAVVCFNYNPSAFYRLADSLRQTIQQTVFLFNQQPVPVT 427 Query: 404 TSIGVAHSNE-----CPTVERLKMLADERLYKSKKNGR 436 SIG+AH+ TV L LAD+ LY +K+ GR Sbjct: 428 VSIGIAHAPTSGKYLVDTVHELFPLADKNLYTAKREGR 465 >UniRef50_A8FRI3 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FRI3_SHESH Length = 578 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 100/177 (56%), Gaps = 16/177 (9%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK-----GGYLCLFDVDKFKNI 334 F A + +KL + + A +D LT R++F E + ++ G + + D+D FK I Sbjct: 393 FRATEREKLIAEHQ-AKIDPLTGLKNRRAFYEITPSFWKQKRTRVGVSMIIIDIDYFKAI 451 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV- 393 NDT+GH +GDEVL++ +L + + V R+GG+EF ++ L+E +I K + Sbjct: 452 NDTYGHTVGDEVLVQFATLLNKNL-RQQDIVARWGGEEFILLLPKTRLKEASTISKHLCE 510 Query: 394 ----HFQVGSIN---LSTSIGVAHSNECP-TVERLKMLADERLYKSKKNGRAQISWQ 442 H + N ++ SIG+AH + T+E+L LAD++LY++K+ G+ QIS++ Sbjct: 511 SISKHAFIADRNELQVTASIGLAHGSPAQFTLEQLISLADQQLYRAKQRGKNQISYE 567 >UniRef50_B0TRJ7 Diguanylate cyclase n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TRJ7_SHEHH Length = 343 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 84/159 (52%), Gaps = 14/159 (8%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMK 349 S+ A D LTK R +F E +G YL L D+D FK+INDT+GH +GD VL+ Sbjct: 175 SLIKLAHSDSLTKTNNRLAFSEGFN--DHQGEYLLLLDLDHFKSINDTYGHDIGDLVLVS 232 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELL--------SILKEIVHFQVGSIN 401 V K+ I D+ +V+R GG+EF + LE L S+ ++ + I+ Sbjct: 233 VANCFKTLI--DESQVFRIGGEEFCIWLGTSDLEGALEHSEKIRRSVAQQSIECDEQKIS 290 Query: 402 LSTSIGVA-HSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ S G+A H + E LKM AD RLY +K +GR I Sbjct: 291 ITVSGGLAQHQPQMLQSELLKM-ADNRLYCAKSHGRNLI 328 >UniRef50_A3Y977 Diguanylate cyclase (GGDEF domain) n=1 Tax=Marinomonas sp. MED121 RepID=A3Y977_9GAMM Length = 368 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 17/159 (10%) Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 + A++D+LT+ GR++ +E L L K + + DVD FK NDT+GH +GD VL V Sbjct: 207 HKMAYVDELTQLPGRRALNERLLGL-SKNYVIAMLDVDHFKKFNDTYGHDMGDLVLKSVA 265 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF--------------QV 397 + GK +R+GG+EFAV++ +E+LS L+++ Sbjct: 266 YNMDK--VASGGKAFRYGGEEFAVVFANRKKDEVLSALEQVRESIEAEKVAVYECKKEAY 323 Query: 398 GSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 ++++ SIG A SN + + AD+ LYK+KK GR Sbjct: 324 KDVSVTISIGAALSNSERDAQEVIKQADQLLYKAKKKGR 362 >UniRef50_C8Q339 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8Q339_9ENTR Length = 297 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 3/147 (2%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQ 357 D+LT+ R+ + L+ + G C+ D+D FK INDT+GH +GD VL + IL+ Sbjct: 149 DELTRLPNRRHMNMKLRDTEQIAGMFCIMDIDDFKKINDTYGHEVGDSVLKQTGNILRHF 208 Query: 358 IPVDKGKVYRFGGDEFAVIYTG-GTLEELLSILKEIVH-FQVGSINLSTSIGVAHSNECP 415 I DK + R GG+EF++I TG G +E + +K + + + ++ S GVA E Sbjct: 209 IN-DKTFIARSGGEEFSIILTGDGQSKECIEEIKHALSAISIDNHPVTFSFGVAVKKEQQ 267 Query: 416 TVERLKMLADERLYKSKKNGRAQISWQ 442 T AD LY SK++G+ +I++ Sbjct: 268 TTSSALSAADCALYDSKRHGKNRITYH 294 >UniRef50_Q7MJY8 GGDEF family protein n=13 Tax=Vibrio RepID=Q7MJY8_VIBVY Length = 515 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 81/150 (54%), Gaps = 14/150 (9%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGGYLCL--FDVDKFKNINDTFGHLLGDEVLMKVVKILK 355 D LT + R++F DL + EK L FD+D FK IND +GHL GD+VL+ V ++ Sbjct: 362 DPLTHTLNRRAFRHDLTQMLEKQAAFSLIGFDIDHFKQINDRYGHLGGDQVLIDVADVIG 421 Query: 356 SQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIG 407 + + + + YRFGGDEF ++ + EL L+ I ++Q I+ + SIG Sbjct: 422 TVLQ-EGDRFYRFGGDEFGILSSVTERSELECYLEAIRERIEKTACYYQDTEIHCTLSIG 480 Query: 408 VA-HSNECPTVERLKMLADERLYKSKKNGR 436 A H +E +E L D +LY+SK GR Sbjct: 481 AAVHCDE--ELEDLVQKMDVQLYRSKDKGR 508 >UniRef50_C4KYP8 Diguanylate cyclase with GAF sensor n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KYP8_EXISA Length = 312 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 88/167 (52%), Gaps = 19/167 (11%) Query: 285 VKKLYSMY----NSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGH 340 V +++S Y A D+LT R + P +GG L L D+D FK +NDTFGH Sbjct: 143 VVRMFSYYLELERRASRDELTNLYNRHYLSNYFETNPNQGGALFLIDLDGFKWVNDTFGH 202 Query: 341 LLGDEVLMKV-VKILKSQIPVDKGKVYRFGGDEFAVIYTG--------GTLEELLSILKE 391 GD VL +V +++ + P+ +VYR GGDEF + G E++LS+LKE Sbjct: 203 DEGDLVLKEVALRLRRLMEPIPDSRVYRLGGDEFLIKIADALSKETVIGYAEQILSVLKE 262 Query: 392 IVHFQVGSINLSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGR 436 + LSTSIG+A S+E + RL AD LY+SK +G+ Sbjct: 263 ----WDDHLPLSTSIGIAQYDSDEQADLGRLLKEADIALYQSKSSGK 305 >UniRef50_Q7MF60 GGDEF family protein n=69 Tax=Gammaproteobacteria RepID=Q7MF60_VIBVY Length = 348 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 22/204 (10%) Query: 254 VINRGIVEKEAIINNHFERVLDGGLFFSAADV----KKLYSMYNSAFLDDLTKAMGRKSF 309 VI + E I H R L L ++ ++ ++L + A D L+ R++F Sbjct: 146 VIRELVTESREI--RHSTRFLTSQLNNASNEISRLKEQLAEVQRDALFDGLSTLYNRRAF 203 Query: 310 DEDLKAL--PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKG-KVY 366 D DLKAL ++ L L D+D FK ND +GHL GD V+ + K L Q +G Y Sbjct: 204 DSDLKALVNAQQNLSLILLDIDHFKTFNDNYGHLFGDSVIRAIAKRL--QTSCREGIAAY 261 Query: 367 RFGGDEFAVIYTGGTL----EELLSILKEIVHFQVGSI-------NLSTSIGVAHSNECP 415 RFGG+EFA+I +L + S+ + I +V N+S S GVA Sbjct: 262 RFGGEEFALIVPNKSLRIARQYAESLRRTIEKLKVKDKRSGQQVENISASFGVAELKPDE 321 Query: 416 TVERLKMLADERLYKSKKNGRAQI 439 T E L AD+ LY++K+ GR ++ Sbjct: 322 TAESLIERADKLLYEAKQLGRNRV 345 >UniRef50_D0YKI6 Diguanylate cyclase n=3 Tax=Klebsiella RepID=D0YKI6_KLEVA Length = 306 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/152 (36%), Positives = 87/152 (57%), Gaps = 12/152 (7%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGGY---LCLFDVDKFKNINDTFGHLLGDEVLMKVVKIL 354 D+LT+ R+ F + ++ EK G+ L + D+D FK IND++GHL+GDEVL + K L Sbjct: 151 DELTQLPNRRFFIDTIR---EKSGHALGLMILDIDFFKKINDSWGHLVGDEVLFSLGKQL 207 Query: 355 KSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV-HFQVGSIN----LSTSIGVA 409 +++ ++ + R GG+EFA+I G + EL ++ + I+ + + IN LS SIGV Sbjct: 208 -AKLTSEQVQPARIGGEEFAIIVDGLSEPELHALAQSILANARTILINHQTPLSISIGVG 266 Query: 410 HSNECPTVERLKMLADERLYKSKKNGRAQISW 441 E DE LYK+K NGR ++ W Sbjct: 267 TWRPGEAQETFIRKVDEALYKAKHNGRGRVEW 298 >UniRef50_C9YGW5 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YGW5_9BURK Length = 345 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 29/180 (16%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFD-------------------EDLKALPEKGGYLCLF 326 + L + + D LT+ + RK+FD E P+ G +L + Sbjct: 144 QNLLGLLDYGERDSLTELLNRKTFDGAFFKATADQSNTPPDNMPERRHDSPDSGVWLAVL 203 Query: 327 DVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVI-------YTG 379 D+D FK +ND FGHL+GDEVL+ + ++++ ++YRFGG+EF ++ + Sbjct: 204 DIDHFKRVNDNFGHLIGDEVLLLMARLMRGNFRF-HDQLYRFGGEEFVILMRCDSSAHAE 262 Query: 380 GTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 G LE L ++ QVG+I +S + N+ P+ + AD+ +Y +K++GR Q+ Sbjct: 263 GALERLRERVQAYAFPQVGTITVSMGVSSLLPNDTPSSAFGR--ADKAVYYAKEHGRNQV 320 >UniRef50_B1Y8F4 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y8F4_LEPCP Length = 345 Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 59/180 (32%), Positives = 88/180 (48%), Gaps = 29/180 (16%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDED-LKAL-------------PEKGG-----YLCLF 326 + S+ + D LT + RKSFDE LKA P + +L + Sbjct: 145 RNFLSLLEYSERDTLTGLLNRKSFDETFLKATVLEAERLFTSDADPRRHAGLRHHFLGVI 204 Query: 327 DVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT-------G 379 D+D FK +ND +GHL+GDEVL+ V +I++S D ++YRFGG+EF V+ T G Sbjct: 205 DIDHFKRVNDDYGHLIGDEVLVLVARIMRSTFRYDD-RLYRFGGEEFVVLLTAPDDEAAG 263 Query: 380 GTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 E L L+ V + G + +ST + P + AD+ +Y K+NGR Q+ Sbjct: 264 AAFERLRLNLENFVFPRAGRVTISTGYSDVRPGDTPQAAFDR--ADKAVYHGKENGRNQV 321 >UniRef50_C6DBE3 Diguanylate cyclase n=5 Tax=Pectobacterium RepID=C6DBE3_PECCP Length = 310 Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 76/153 (49%), Gaps = 6/153 (3%) Query: 294 SAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKI 353 +F D+LT+ R+ F +LK L K YL + D+D FK IND +GH GDEVL K I Sbjct: 147 QSFSDELTQLPNRRFFINELKKLEAKTPYLFIIDIDNFKVINDKYGHTKGDEVLSKFGHI 206 Query: 354 LKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI-----NLSTSIGV 408 L S+ + R GG+EFA+I GT + + +E++ I +LS SIG Sbjct: 207 L-SRFDNSEVVATRIGGEEFAIILYAGTQDRAEKLAREVLKNANKIIIKNMHHLSVSIGA 265 Query: 409 AHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 E D LY++K G+ ++ W Sbjct: 266 GKKQPQEPTEHFMKRVDIALYQAKNTGKGKVEW 298 >UniRef50_C7LTX9 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTX9_DESBD Length = 835 Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 18/169 (10%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDED----LKALPEKGG--YLCLFDVDKFKNINDTFG 339 +K ++ +S +D LT A R +FD + LK EK C DVDK K +NDT+G Sbjct: 668 RKRRALEHSVRIDPLTGASTRSAFDSEMPHRLKIATEKNEKFMFCYVDVDKLKQVNDTYG 727 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS 399 H+ GD L +VV I+++ I ++YR GGDEF +I+ G EEL I + VH + + Sbjct: 728 HIHGDTYLKEVVSIIRACIRASD-EIYRVGGDEFVLIFPGCGPEELQRIWGQ-VHAHIDA 785 Query: 400 INLSTSI----GVAH------SNECPTVERLKMLADERLYKSKKNGRAQ 438 +N S +I G+ H E + L AD+ +Y+ K+ +Q Sbjct: 786 LNNSGTIPYTMGLTHGCTVFNPQEPQDIASLLKKADQSMYRRKQPHSSQ 834 >UniRef50_A6FJF7 Probable GGDEF family regulatory protein n=1 Tax=Moritella sp. PE36 RepID=A6FJF7_9GAMM Length = 331 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 28/193 (14%) Query: 273 VLDGGLFFSAADVKKLYSMYNSAF----LDDLTKAMGRKSFDEDL--------------K 314 +LD F +A +V +Y+ LD LT+ + R++F+ L + Sbjct: 119 ILDTNQFGTAVNVLHIYANQRHVLFKNRLDPLTELLNRQTFESKLMEVIAGHDHNERREQ 178 Query: 315 ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFA 374 + YL + D+D FK +ND FGH++GDEVL+ + +++K+ + ++R+GG+EF+ Sbjct: 179 SDEHCAWYLGMLDIDNFKQVNDQFGHVIGDEVLILIARLIKTNFR-SQDYIFRYGGEEFS 237 Query: 375 VIYTGGT-------LEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLADER 427 V++ LE L ++ + + QVG+I + SIG + L AD Sbjct: 238 VLFKCAAEDIAVLILERLRGMIAQYIFPQVGTITI--SIGFTELESGRVLSTLVQQADVA 295 Query: 428 LYKSKKNGRAQIS 440 LY SK+ GR +++ Sbjct: 296 LYDSKRAGRNKVT 308 >UniRef50_Q30R33 Diguanylate cyclase (GGDEF domain) n=2 Tax=Campylobacterales RepID=Q30R33_SULDN Length = 318 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 92/170 (54%), Gaps = 17/170 (10%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDL------KALPEKGGYLCLFDVDKFKNINDTFG 339 +K+ + ++ LD LTK R+S L K+LP ++ + D+D FK+IND +G Sbjct: 147 QKVKILEETSNLDPLTKVFNRRSLSSYLQEVCSNKSLPYDDLHVMMLDIDNFKSINDKYG 206 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS 399 H+ GD++L+ + IL+ + D K++R+GG+EF ++ + ++ I ++H + S Sbjct: 207 HIAGDKILIFISNILRKTLR-DGDKIFRYGGEEFTIVINRNSDDQCEQIANRLLHL-ISS 264 Query: 400 INL---------STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 NL + SIGV E T + L AD+ LY SKK+G+ +S Sbjct: 265 NNLIYMGERISVTASIGVTKLKEHDTPDSLLSRADKALYVSKKSGKNMVS 314 >UniRef50_A0KMP3 GGDEF domain protein n=2 Tax=Aeromonas RepID=A0KMP3_AERHH Length = 352 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 96/182 (52%), Gaps = 17/182 (9%) Query: 273 VLDGGLFFSAADVKKLYSMYNS----AFLDDLTKAMGRKSFDEDLKALPEKGG--YLCLF 326 + G + D+ L+ M + D LT+ R++ + L+AL +G L L Sbjct: 168 AMPGWHIVTLRDIHDLHCMIEEVSRLSCTDPLTELGNRRAAGQQLQALWLQGEPFSLILC 227 Query: 327 DVDKFKNINDTFGHLLGDEVLMKVVKILKSQI-PVDKGKVYRFGGDEFAVIYTGGTLEEL 385 D+D FK IND +GH GD L +V +I+ Q+ P + + R+GG+EF +I G E++ Sbjct: 228 DIDHFKQINDRYGHPAGDAALCEVARIMTRQLQPAE--HLARWGGEEFLLILPGVDAEQV 285 Query: 386 LSILKE--------IVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRA 437 + ++ +V ++ S +L+ S+G A E ++ L ++AD+ LY++K NGR Sbjct: 286 VERAEQLRRQFVGHVVTWEGQSFSLTMSLGCATQEEGQGIDSLLLVADKALYQAKSNGRN 345 Query: 438 QI 439 ++ Sbjct: 346 RV 347 >UniRef50_Q3IC23 Putative GGDEF domain membrane protein n=2 Tax=Alteromonadales RepID=Q3IC23_PSEHT Length = 306 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 87/155 (56%), Gaps = 12/155 (7%) Query: 295 AFLDDLTKAMGRKSFDEDLKA-LPEKGG-YLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 A LD LT A R + + L E+ YL L D+D FK IND +GH +GD+VL++V Sbjct: 141 AMLDPLTGAGNRLAMNHYFSVELRERAQLYLFLVDLDYFKQINDKYGHDVGDKVLIEVAT 200 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLST 404 +LK + KG V+R GG+EFA+I + + L++ +++ ++ INL+ Sbjct: 201 LLK--VTFAKGYVFRVGGEEFALISSFNSEHAALAVAEKVRAALENKYINVDNYKINLTA 258 Query: 405 SIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 SIGVA+ ++ L AD++LYK+K GR + Sbjct: 259 SIGVANYKPQQSLNELLKAADKQLYKAKDLGRNSV 293 >UniRef50_D1CA84 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CA84_SPHTD Length = 1156 Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 15/156 (9%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LT A+ R D+ L+A + LCL DVD FKNIND +GH GDE L +V Sbjct: 16 DPLTGALSRTCLDDVLQATLDAAQRERSRVTLCLLDVDHFKNINDAYGHRRGDEALREVA 75 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGT-------LEELLSILKEIVHFQVGSINLST 404 ++ ++ + R+GGDEF +I T E LL+ ++ V + LS Sbjct: 76 HRIQREL-RSSDLMVRYGGDEFVLILPDSTHAQAVALAERLLARVQATPCPGVPPLRLSI 134 Query: 405 SIGVA-HSNECPTVERLKMLADERLYKSKKNGRAQI 439 S+GVA + ++ T E L AD+R ++K+ GR ++ Sbjct: 135 SVGVATYPDDADTAEALMECADQRHAQAKRQGRRRV 170 >UniRef50_C7R5P3 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R5P3_KANKD Length = 635 Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 82/157 (52%), Gaps = 21/157 (13%) Query: 295 AFLDDLTKAMGRKSFDEDLKAL---PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 A D LT + R+SFD DL + PE+ L + D+D FK ND +GH GD L V Sbjct: 474 AHSDGLTGLLNRRSFDRDLDEVIRTPEERYVLAIADIDDFKLYNDNYGHEAGDNALKAVA 533 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH----FQV-------GSI 400 L I GK YR+GG+E A++ G LE++ S L+ IVH Q+ G Sbjct: 534 AFL---INKSSGKCYRYGGEELAILLKLGQLEDIESELESIVHGINDLQIKHDYGKKGGD 590 Query: 401 NLSTSIGVA--HSNECPTVERLKMLADERLYKSKKNG 435 LS SIG A +N+ P ++ AD++LYK+K G Sbjct: 591 FLSISIGAAVIAANDSP--QQAIKRADQQLYKAKAAG 625 >UniRef50_B1YFH0 Diguanylate cyclase n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YFH0_EXIS2 Length = 380 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 65/170 (38%), Positives = 93/170 (54%), Gaps = 22/170 (12%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKA-------LPEKGGYLCLFDVDKFKNINDTFGHLL 342 ++ + + D LT R++FDE L+A L G L L DVD+FK NDT+GHL Sbjct: 209 ALIHRSLHDALTAIPNRRAFDEHLEASFTAARELQTDVG-LILIDVDEFKLYNDTYGHLK 267 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK----EIVHFQVG 398 GD L KV LK Q + G V R+GG+EFAVI T +E++ + + EI+ ++ Sbjct: 268 GDWCLQKVAGTLKKQAG-EFGHVSRYGGEEFAVILTEH-VEQITHVAERIRSEILRMKIE 325 Query: 399 S------INLSTSIGVA--HSNECPTVERLKMLADERLYKSKKNGRAQIS 440 LS SIG+A +E T L +L+D+ LY++K +GR QIS Sbjct: 326 HKAYEPLCQLSVSIGLAVVRPSETLTEGDLIVLSDQALYRAKSSGRNQIS 375 >UniRef50_A4BD76 GGDEF domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BD76_9GAMM Length = 476 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 15/168 (8%) Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLKA-LPEKGGY-----LCLFDVDKFKNINDTFGH 340 +L+ + LD LT R+ FD L A L Y + + D+D FK IND FGH Sbjct: 306 ELHKERQLSMLDPLTGLPNRQGFDRRLSAELARAERYDQALSIAIIDIDFFKRINDEFGH 365 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI-------- 392 L+GD+VL + K +K ++ + + RFGG+EF ++ TLEE L+ + ++ Sbjct: 366 LVGDKVLKMMAKEMK-RVCRESDFLSRFGGEEFVLLLPQTTLEEGLTAVDKLRRHVETRP 424 Query: 393 VHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 H+Q +NL+ S GVA T+E AD LY SK+ GR +++ Sbjct: 425 FHYQNTPVNLTVSAGVAQRQVNETLESWLDRADAALYVSKREGRNRVT 472 >UniRef50_D2C2R9 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech586 RepID=D2C2R9_DICD5 Length = 501 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 15/158 (9%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVDKFKNINDTFGHLLGDEVLM 348 A D LT M R++F+ + L K + L D+D FK IND +GH +GD VL+ Sbjct: 340 ATTDKLTGLMNRQAFEYIFRTLRMKQSAQQRTFSIILIDLDFFKKINDQYGHHIGDRVLV 399 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSI---LKEIVHFQVGS-----I 400 K ++++ I R+GG+EF ++ +L + + +++ VHF + S I Sbjct: 400 KTARLIQRAIR-KTDSACRWGGEEFVLLLGDCSLHQAHRVAEKIRQAVHFALVSHRHQVI 458 Query: 401 NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 NL+ S GVA SN +++ L AD+ LY++K+ GR Q Sbjct: 459 NLTISCGVAESNPGESIDHLVQRADKALYQAKRQGRDQ 496 >UniRef50_C8QCH2 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8QCH2_9ENTR Length = 474 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 18/163 (11%) Query: 295 AFLDDLTKAMGRKSFDEDLKA---LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 A D LT+ + R E+L+ P++ + + DVD FK IND FGH GD VL ++ Sbjct: 300 ANFDFLTQLLSRSGLYENLRQEPFSPQRAAGVVMLDVDYFKTINDNFGHDAGDGVLEEIA 359 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVI---YTGGTLEELL-----SILKEIVHFQVGSINLS 403 + ++ + ++G V RFGG+EF V+ Y L +L S+++E Q ++ ++ Sbjct: 360 RRIQDVVN-NRGLVCRFGGEEFVVVVFDYNHSQLYQLAEVIRQSMVREKFWLQGNTVTVT 418 Query: 404 TSIGVAHSNEC------PTVERLKMLADERLYKSKKNGRAQIS 440 S+G+A N V RL AD+ LY SK+NGR Q S Sbjct: 419 ASLGLALGNAVNEREWQGVVNRLISAADKNLYLSKRNGRNQTS 461 >UniRef50_D0I8G1 Diguanylate cyclase n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I8G1_VIBHO Length = 333 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 9/132 (6%) Query: 317 PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVI 376 P ++C+FD+D FK IND GH+ GDEV++ V ++K +I D+ ++R+GGDEF VI Sbjct: 182 PTHHHWVCIFDIDHFKQINDALGHVFGDEVILLVTAMMK-KIFHDEDILFRYGGDEFVVI 240 Query: 377 YTGGTLEELLSILKEIV-------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLY 429 + EE+ + + E + + Q +++S E + L AD+ LY Sbjct: 241 MHPQSREEMEATVCEFIDAVNKRDYGQAKEVSISMGAAAISDQELNAITVLG-FADQALY 299 Query: 430 KSKKNGRAQISW 441 K+K+NGR Q+++ Sbjct: 300 KAKQNGRNQVAF 311 >UniRef50_B5CPJ5 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CPJ5_9FIRM Length = 443 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 79/242 (32%), Positives = 124/242 (51%), Gaps = 43/242 (17%) Query: 223 DVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLF--F 280 D+YL++ I+ L+ I C+ +VR++I +V + + +++G +F Sbjct: 211 DMYLKLEIAIMILVILLLSI----CI-IVRKLIVVPLV-------YYNKSIMEGEIFPVI 258 Query: 281 SAADVKKLYSMYNSAFL---------------DDLTKAMGRKSFDEDLKALPEKGGY--- 322 AA+++K YN F D +T A+ R+SF E L + E G Sbjct: 259 GAAELQKWAETYNKVFKENEETQRLIRRQAEHDAMTDALNRRSF-EKLLHMYENGDTPYA 317 Query: 323 LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQI-PVDKGKVYRFGGDEFAVIYTGGT 381 L L DVD FK +ND +GH +GDE+L KV +LK +D V R GGDEFA+I T Sbjct: 318 LILIDVDTFKTVNDMYGHAVGDEILKKVTGLLKKAFRSID--HVCRIGGDEFAIIMVEMT 375 Query: 382 LEELLSILKEI--VHFQVGSIN-----LSTSIGVAHSNECPTVERLKMLADERLYKSKKN 434 + +I ++I V+ ++G+ N +S S+GVA S+ + E + AD+ LY K+N Sbjct: 376 SDLKYTIEEKIKAVNEELGTENENIPAVSLSVGVAFSDRENSGESIFKDADKALYYVKEN 435 Query: 435 GR 436 GR Sbjct: 436 GR 437 >UniRef50_UPI0001B53B7D diguanylate cyclase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B53B7D Length = 219 Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 22/182 (12%) Query: 278 LFFSAADVKKLYSMYNSAF--------LDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVD 329 LF + D ++ Y SA D LT + R+ D+ L LP + L D+D Sbjct: 31 LFATRGDWRRAYRHLRSALDIARAGSLRDPLTSSYNRRYLDQRLPELPAAVA-VALVDLD 89 Query: 330 KFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSI- 388 +FK++NDT+GHLLGD VL +V +L+ +P D R+GG+EFA++ G + I Sbjct: 90 RFKSVNDTYGHLLGDRVLCRVADLLQEGLPAD-AFCARYGGEEFALVLPGIDHRGAVRIA 148 Query: 389 ----LKEIVH----FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 L+ H Q G + ++ S+G+AH + R AD LY +K+ GR +++ Sbjct: 149 DAARLRVARHPWSELQPG-LRVTISVGLAHGTG--SGPRQLHRADNLLYAAKRAGRNKVA 205 Query: 441 WQ 442 + Sbjct: 206 FH 207 >UniRef50_D2C311 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech586 RepID=D2C311_DICD5 Length = 471 Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 83/159 (52%), Gaps = 22/159 (13%) Query: 298 DDLTKAMGRKSF-------DEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKV 350 D LT + R F D+++K+ + + L D+D FKNIND+FGH GDE+L +V Sbjct: 310 DFLTNTLSRYGFTEALSTHDQNIKS-QQDAVNIMLIDIDNFKNINDSFGHDCGDEILRQV 368 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVI---YTGGTLEELLSILKEIVH-----FQVGSINL 402 +++ + +G V R GG+EFAV+ Y+ L L++ + F + + Sbjct: 369 ANVIQRTVSA-QGLVSRIGGEEFAVVCFNYSPPAFYRLADELRQTIQHTVFLFNQQHVPV 427 Query: 403 STSIGVAHSNEC-----PTVERLKMLADERLYKSKKNGR 436 + SIG+AH+ TV L LAD+ LY +K+ GR Sbjct: 428 TVSIGIAHAQVAGKHLVDTVHELFPLADKNLYTAKREGR 466 >UniRef50_A8VQE2 Putative diguanylate cyclase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VQE2_9BACI Length = 301 Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 17/185 (9%) Query: 273 VLDGGLFFSAADVKKLYSMYN-SAFLDDLTKAMGRKSFDEDLKA-----LPEKGGY-LCL 325 ++D F ++K+L N +A D+LT+ ++ E L A L E+ + L + Sbjct: 116 IMDDASFNQGVEMKRLLDQANLAAVTDELTRVYNKRYILEKLPADLTLALAEQQPFGLIV 175 Query: 326 FDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL 385 D+D FK++NDT+GHL GD++L + +LK RFGG+EF V G + + Sbjct: 176 ADIDHFKSVNDTYGHLAGDQILREFAAVLKDTCLDQADWTARFGGEEFVVCLPGKDRDTV 235 Query: 386 LS--------ILKEIVHFQVGSINLSTSIGV--AHSNECPTVERLKMLADERLYKSKKNG 435 L+ I +++ H+ +I L++S GV + E L AD+ LY+SK+ G Sbjct: 236 LAVAERMRARIEEQVFHYDGQAITLTSSFGVYALAPGDVIDYETLLKRADQHLYQSKRTG 295 Query: 436 RAQIS 440 R +++ Sbjct: 296 RNRVT 300 >UniRef50_B6BHL9 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHL9_9PROT Length = 495 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 97/167 (58%), Gaps = 13/167 (7%) Query: 287 KLYSMYNSAFLDDLTKAMGRKSFD---EDLKALPEKGGY---LCLFDVDKFKNINDTFGH 340 K + + + ++D LT +M R++++ E+L +L + + + D+D FK IND +GH Sbjct: 330 KTHQIEDMTYIDSLTNSMNRRAYNIKIEELLSLYSRYNTVFSIAMLDIDDFKKINDEYGH 389 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSI---LKEIVHFQV 397 +GD VL+ +V ++KS+I + +YR GG+EF +++ ++ E + + +++ V ++ Sbjct: 390 RVGDNVLINIVLLIKSEIRQNDF-LYRIGGEEFVILFAQTSIHEAIIVSEKIRQSVEAEL 448 Query: 398 GSI---NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 +I ++ SIGV+ + T + D LYKSK NG+ Q+++ Sbjct: 449 KTIKSKTITVSIGVSEVMQNDTENEIFTRVDRLLYKSKTNGKNQLTY 495 >UniRef50_A3USF1 GGDEF family protein n=2 Tax=Vibrionales RepID=A3USF1_VIBSP Length = 299 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/238 (27%), Positives = 120/238 (50%), Gaps = 21/238 (8%) Query: 208 FAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRR--VINRGIVEKEAI 265 AYL GL Y+ + + T+ ++ +A + + ASCL RR +++ + E + Sbjct: 77 LAYL-IGLAPQLYEAEPSHEIETISVYASAYILI--AASCL---RRDFEVHKRFTQSEQL 130 Query: 266 INNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCL 325 + +F + + L YN +L + + S D L + Sbjct: 131 RKQAIQLRKQSNMFEALSYQDALTGCYNRLYLHQVIEP----SIDRQLSITS------IM 180 Query: 326 FDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL 385 D+D FK+INDT+GH +GD V+ ++ ++ ++P +R+GG+EF V+ G T + Sbjct: 181 IDIDHFKSINDTYGHQMGDMVIKELADEIQKRLPT-SSNCFRYGGEEFLVMVQGETEASI 239 Query: 386 LSILKEIVHF-QVGSINLSTSIGVAHSNEC-PTVERLKMLADERLYKSKKNGRAQISW 441 S++ ++ + + ++ SIGV H+++ +VE+L AD+ LY SKK+GR +I+W Sbjct: 240 ESLVNSLLESPSLLRLEVTISIGVKHASQALGSVEQLIDDADQALYISKKSGRNKITW 297 >UniRef50_Q8D5C1 FOG: GGDEF domain n=1 Tax=Vibrio vulnificus RepID=Q8D5C1_VIBVU Length = 337 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 12/155 (7%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEKGG--YLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 A LD LT R + +AL +G +L + D+D FK IND +GH GD VL VVK Sbjct: 183 ATLDPLTGTNNRLALKHRYQALKTQGTAFFLLVLDIDHFKAINDEYGHDGGDCVLRSVVK 242 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLST 404 + V + V+R GG+EF ++ G + + L + I +H++ G+I+++ Sbjct: 243 TMAH--VVGEENVFRQGGEEFCILLAGVSHQHALKTAETIRQNIGDTPIHYREGAISVTV 300 Query: 405 SIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 SIG+A ++ V+ + AD LY +K GR ++ Sbjct: 301 SIGLAEAHASSCVDEINRQADANLYDAKSQGRNRV 335 >UniRef50_A7HKL8 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKL8_FERNB Length = 474 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/136 (38%), Positives = 82/136 (60%), Gaps = 9/136 (6%) Query: 312 DLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGD 371 +L +K Y+ +FD+D FK INDT+GHL+GDEVL + KILK + DKG R+GG+ Sbjct: 318 NLSKYNKKPYYVAMFDLDNFKKINDTYGHLVGDEVLKILGKILKEAVG-DKGIAGRYGGE 376 Query: 372 EFAVIYTGGTLEELLSILKEIVH------FQVGSINLSTSIGVAHSNECPTVERLKMLAD 425 EF +I T +E++ ++EI+ F G +S + + + + PT E LK AD Sbjct: 377 EFTLILTKIEKDEVVDFIEEILQKVRTAEFPHGKCTVSCGVVSSENYQSPT-EVLKA-AD 434 Query: 426 ERLYKSKKNGRAQISW 441 E LY +KK+G+ + ++ Sbjct: 435 ELLYIAKKSGKDRATY 450 >UniRef50_C4G287 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G287_ABIDE Length = 484 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/155 (40%), Positives = 87/155 (56%), Gaps = 11/155 (7%) Query: 295 AFLDDLTKAMGRKSF----DEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKV 350 A LD+LTK M RKSF D K +GG+L L D+D FK INDT GH GDE L + Sbjct: 307 ATLDELTKIMNRKSFMARFDYFSKQHLLEGGHLFLIDIDFFKTINDTLGHAAGDEALSFL 366 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEE----LLSILKEIVHFQVGS-INLSTS 405 L + + D G + R+GGDEF I+ T+EE + ++ KEI + G +L+ S Sbjct: 367 ATNLTACVGKD-GFIARWGGDEFIGIFF-STVEEPITKIKTLSKEISETETGKRFHLTLS 424 Query: 406 IGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 +G+ + ++ + AD LY SKKNGR Q++ Sbjct: 425 VGMTLIEDDLSLNKEVEKADIALYTSKKNGRNQVT 459 >UniRef50_C6CT46 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT46_PAESJ Length = 324 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/156 (34%), Positives = 80/156 (51%), Gaps = 11/156 (7%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNINDTFGHLLGDEVLM 348 A D LT R+ F E L+ E LC+ D+D+FK+INDT+GH +GD VL Sbjct: 165 ASTDPLTGLKNRRYFQEQLQKYTELSEQTEAALSLCIVDIDRFKSINDTYGHPVGDLVLT 224 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE----IVHFQVGSINLST 404 ++ ++L+ Q P D V RFGG+EF ++ E+ L + +G + ++ Sbjct: 225 RLAQLLQEQSP-DGAVVARFGGEEFVILLPELDQEQALVAAERYRAATETTPLGDLRITI 283 Query: 405 SIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 SIG A T L AD+ LY SK NGR +++ Sbjct: 284 SIGTATFAAAETELSLLQQADQALYHSKNNGRNRVT 319 >UniRef50_UPI0001C4254B Signal transduction diguanylate cyclase (GAF-GAF-GGDEF domains) n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4254B Length = 628 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 81/150 (54%), Gaps = 10/150 (6%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGGY--LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILK 355 D LT R D+ ++A E GY LFDVD FK INDT GH +GDEVL++V KILK Sbjct: 468 DHLTSLYSRSYLDQQIRASLENDGYGTYLLFDVDNFKQINDTHGHQIGDEVLIQVAKILK 527 Query: 356 SQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSI---LKEIVHFQVGSINLSTSIGVAHSN 412 I D+ R+GG+E A+ LE+ I + E V +Q ++ S GV++ + Sbjct: 528 ENIR-DEDIAARWGGEELALYLPKVNLEDAKKIAVRIVEAVEYQTEP-PITVSCGVSYWH 585 Query: 413 ECPTVERLKML---ADERLYKSKKNGRAQI 439 LK L AD+ LY +K+ G+ +I Sbjct: 586 HHKAARSLKELIKEADDGLYTAKRLGKNRI 615 >UniRef50_C4ICK4 Diverse intracellular signaling/diguanylate cyclase (GGDEF) domain protein n=2 Tax=Clostridium butyricum RepID=C4ICK4_CLOBU Length = 570 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/126 (40%), Positives = 74/126 (58%), Gaps = 11/126 (8%) Query: 323 LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL 382 + + D+D FK+INDT+GHL GD V++ V IL I +KG RFGGDEF +I + Sbjct: 441 VIMIDIDNFKSINDTYGHLYGDRVILDVATIL-IYISDNKGYAGRFGGDEFILILPNTSE 499 Query: 383 EELLSILKEIVHFQVGSIN--------LSTSIGVAHSNECPTVERLKMLADERLYKSKKN 434 EE ++I K+I+ ++ +N +S SIGV + N C + AD +YKSK N Sbjct: 500 EEAINIGKDIMK-KIDRLNTLTESERPISLSIGV-YENTCDNIHDCMNNADSAMYKSKTN 557 Query: 435 GRAQIS 440 G+ QI+ Sbjct: 558 GKNQIN 563 >UniRef50_C0GKX4 Diguanylate cyclase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKX4_9FIRM Length = 352 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 84/153 (54%), Gaps = 13/153 (8%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGG--YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILK 355 D LT + +SF E L+ E YL L D+D FK +ND +GH+ GD+VL ++ I+ Sbjct: 196 DYLTNLLNHRSFQEHLRGDLENNSAFYLALADIDNFKLVNDKYGHVTGDKVLRELGSIIN 255 Query: 356 SQIPVDKGKVYRFGGDEFAVIYTGGTLEEL--------LSILKEIVHFQVGSINLSTSIG 407 S + V +GK +R+GG+EFA+I +E+ LS+ I + + + +++ S G Sbjct: 256 STVSVKQGKAFRYGGEEFAIIIYNKEQDEVDKLLVEIKLSVANHIFYCEGEAFSVTMSFG 315 Query: 408 VAHSN-ECPTVERLKMLADERLYKSKKNGRAQI 439 N E P ++L D+ LY++K GR +I Sbjct: 316 SCKQNGEEP--DKLVEKVDKLLYEAKDRGRNRI 346 >UniRef50_Q320T0 Diguanylate cyclase yddV n=41 Tax=Enterobacteriaceae RepID=YDDV_SHIBS Length = 460 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 82/162 (50%), Gaps = 17/162 (10%) Query: 297 LDDLTKAMGRK----SFDEDLKALPEKGGYLC--LFDVDKFKNINDTFGHLLGDEVLMKV 350 +D LTK + R+ F ++ G L + DVDKFK INDT+GH GDE+L KV Sbjct: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------VHFQVGS---IN 401 + + V+R+GGDEF ++ T + E L + I + + I Sbjct: 357 SQAFYDNVR-SSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIA 415 Query: 402 LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS-WQ 442 LS SIG A N P ERL +ADE LY +K+ GR ++ W+ Sbjct: 416 LSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 >UniRef50_A8FBD0 ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Bacillus pumilus RepID=A8FBD0_BACP2 Length = 361 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 24/185 (12%) Query: 279 FFSAADVKKLYSMYN----SAFLDDLTKAMGRKSFDEDLK-------ALPEKGGYLCLFD 327 F+ K Y + N A D LT + ++ FDE L P L D Sbjct: 172 FYVIEHQTKAYQLLNLYKFQAHYDFLTGVLNKRKFDEVLNDAFSMKFKHPTHQMSLIYLD 231 Query: 328 VDKFKNINDTFGHLLGDEVLMKVVK-ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELL 386 +D FK+IND +GH GD VL ++ K ++K+ D + R GG+EFAV T+E+ Sbjct: 232 IDYFKSINDQYGHHEGDMVLKEIGKRLIKNTRSSDY--IGRIGGEEFAVFLPNCTVEKTW 289 Query: 387 SILKEI--------VHFQVG-SINLSTSIGVAH-SNECPTVERLKMLADERLYKSKKNGR 436 I + + V+ Q G SI+++ S+G A+ S P +++L ++AD+ LYK+K++GR Sbjct: 290 QIAERLRRKIADQPVYLQNGMSIHITVSLGCAYYSGTSPDIKQLPIIADQELYKAKQSGR 349 Query: 437 AQISW 441 Q+S+ Sbjct: 350 NQVSF 354 >UniRef50_A6ANT2 Putative signal transduction protein n=1 Tax=Vibrio harveyi HY01 RepID=A6ANT2_VIBHA Length = 441 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 13/165 (7%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK--GGYLCLFDVDKFKNINDTFGHLLG 343 K+ + + N A+ D LT + R+ + L AL E+ G + +FD+D FK INDT+GH +G Sbjct: 275 KQRFDLQNEAYTDFLTGLLNRRGLENRLYALKEQQVSGSIAVFDIDFFKAINDTYGHEIG 334 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS---- 399 D VL++ + ++ ++ + R GG+EF ++ G T E + + E + +V + Sbjct: 335 DVVLVQFALLCGAKTDLN-FTLSRTGGEEFVLLMPGATRAEAV-LFCEALRQEVAATPIL 392 Query: 400 -----INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 I ++ SIGVAH + V ADE LYK+K+ GR ++ Sbjct: 393 INELNIEITVSIGVAHFHSADDVRIALAEADEALYKAKQTGRNRV 437 >UniRef50_A9WGU1 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WGU1_CHLAA Length = 324 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 10/128 (7%) Query: 318 EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIY 377 E+ +C+ DVD FK IND +GHL+GD+VL V + + QI + RFGG+EF ++ Sbjct: 192 ERPLTMCMLDVDHFKQINDRYGHLVGDQVLRAVAQTVAHQIRT-ADSIGRFGGEEFILLL 250 Query: 378 TGGTLEELLSILKEI--------VHFQVGSINLSTSIGVAHSNEC-PTVERLKMLADERL 428 L L++ + + VH G + + S+GVA T+ERL AD L Sbjct: 251 PNTNLPSALTLAERLRVTIADLQVHTDRGIVTATISVGVAERQSTDTTIERLIDRADRAL 310 Query: 429 YKSKKNGR 436 Y +K+ GR Sbjct: 311 YAAKRQGR 318 >UniRef50_C4G1X3 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1X3_ABIDE Length = 742 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 17/165 (10%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNINDTFGHLLGDEVLM 348 A LD LT+ R+ F E L ++ + +FD+D FK NDT+GH GDE L Sbjct: 575 AGLDALTQISNRREFTEKFHELRKEANKSSKTVSVFMFDIDDFKKYNDTYGHFEGDEALK 634 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLS----ILKEIVHF-------QV 397 KV ++ + I G RFGG+EF G T EE I KEI+ ++ Sbjct: 635 KVAGVINNNIIACGGIAARFGGEEFISACIGLTSEENFELGEKIRKEILEMGIKNEKTEL 694 Query: 398 GSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISWQ 442 G +++S I +A + T + LADE LY++KK G+ +++ + Sbjct: 695 GILSISIGIAIAKPDNIITKSEIMSLADEMLYEAKKTGKNKVAMK 739 >UniRef50_P31129 Uncharacterized protein ydeH n=55 Tax=Enterobacteriaceae RepID=YDEH_ECOLI Length = 296 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 19/191 (9%) Query: 264 AIINNH-----FERVLDGGLFFSAADVK-KLYSMYNSAFLDDLTKAMGRK----SFDEDL 313 AI+ NH F+ +G L F+AA K+Y + + +D LT GR+ SFD L Sbjct: 92 AIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQL 151 Query: 314 KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEF 373 + YL L D+D+FK +NDT+GHL+GD VL + L S D VYR+GG+EF Sbjct: 152 RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTR-DYETVYRYGGEEF 210 Query: 374 AVIYTGGTLEELLS--------ILKEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLAD 425 +I EE + + G IN++ + GV+ + ++ + AD Sbjct: 211 IIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRAD 270 Query: 426 ERLYKSKKNGR 436 +Y+ K+ GR Sbjct: 271 RAMYEGKQTGR 281 >UniRef50_B1M823 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M823_METRJ Length = 785 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 13/193 (6%) Query: 260 VEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNS----AFLDDLTKAMGRKSFDEDLKA 315 +E ++ + DGG + DV K AF D LTK R++ L+ Sbjct: 331 LEDGRVLQVEIRPIEDGGNVVTFDDVTKEREAQRRIAELAFCDPLTKLANRRALSARLEH 390 Query: 316 --LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEF 373 P++ L L D+D+FK +NDT+GH++GD++L++V L++ I G V R GGDE Sbjct: 391 DFTPKRVVKLLLIDLDRFKQVNDTYGHVVGDQLLIQVANRLRT-IAGPDGFVARLGGDEM 449 Query: 374 AVIYTGGTLEEL--LSILKEIVHFQVG----SINLSTSIGVAHSNECPTVERLKMLADER 427 AV+ G + + + + E + G ++++ SIG+ +++ L +D Sbjct: 450 AVLVYGDQTQAMAVATAVIEALALPYGIDDLTVSIGCSIGLCCTDDAQDAIELMQFSDIA 509 Query: 428 LYKSKKNGRAQIS 440 LY+SK+ GR + S Sbjct: 510 LYESKRQGRGRTS 522 >UniRef50_B4RU26 GGDEF protein n=2 Tax=Alteromonas macleodii RepID=B4RU26_ALTMD Length = 946 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 21/160 (13%) Query: 298 DDLTKAMGRKSFD-------EDLKALPEKGGYLCL--FDVDKFKNINDTFGHLLGDEVLM 348 DDLT R++FD E+ KA K LCL D+D FK +ND + HL+GD+V+ Sbjct: 789 DDLTGIANRRAFDRWLVQYFEEAKA---KQTPLCLAVIDIDHFKQVNDQYSHLVGDKVIT 845 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVI---YTGGTLEELLSILKEIV-----HFQVGSI 400 +V +IL ++P K R+GG+EF V+ Y + +++IV F ++ Sbjct: 846 EVARILNREVP-HYAKCARWGGEEFTVLLPEYDLINARVAMDHVRKIVAAHDFSFIAQTL 904 Query: 401 NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 ++ SIGVA ++ +R+ AD+ LY +K+NGR Q++ Sbjct: 905 KVTISIGVASADGARDHDRMLTHADQALYTAKENGRNQVT 944 >UniRef50_A5F099 GGDEF family protein n=33 Tax=Vibrio RepID=A5F099_VIBC3 Length = 412 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 91/176 (51%), Gaps = 36/176 (20%) Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 Y AF D LT+ GR++ D+DLK + K L + DVD FK NDT+GH GD+VL V Sbjct: 235 YEMAFNDPLTQIPGRQALDQDLKHIGRKFT-LAMLDVDHFKKFNDTYGHDTGDDVLRLVA 293 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSIL----KEIVHFQV---------- 397 L+ K +VYR+GG+EF++IY G +E+L + ++I +++ Sbjct: 294 SRLREI--NGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQRPK 351 Query: 398 ----GS-----------INLSTSIGVAHSN--ECPTVERLKMLADERLYKSKKNGR 436 G+ + ++ SIGV S P +E LK AD LYK+K+ GR Sbjct: 352 SHAEGAKKRSRKSNSDIVTITISIGVCDSELYRHP-IEALKA-ADGALYKAKQAGR 405 >UniRef50_Q3AB06 GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB06_CARHZ Length = 217 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 12/146 (8%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGGY-LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKS 356 D LT R F+E L + KG L L D+D FKNIND +GHL GD VL KV +ILK+ Sbjct: 63 DALTGLFNRNYFNEKLYNIKTKGPISLILLDLDNFKNINDLYGHLAGDTVLQKVAEILKN 122 Query: 357 QIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSINLSTSIGV 408 + + R+GGDEFAV+ T +E L+I + I F + +S SIG+ Sbjct: 123 -VTRKVDIIVRWGGDEFAVVLWETTEQEALNIAQRIKTQIENYDFVFGQSRVRISVSIGI 181 Query: 409 AHSNECPTVERLKML--ADERLYKSK 432 A E ++ ++ ADE LY +K Sbjct: 182 ASMQESDLNDKDQLFKTADEALYLAK 207 >UniRef50_D0ICL2 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICL2_VIBHO Length = 284 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 83/159 (52%), Gaps = 20/159 (12%) Query: 293 NSAFLDDLTKAMGRKSFDEDLK---ALPEKGGY---LCLFDVDKFKNINDTFGHLLGDEV 346 N A LD LT R SF++DL+ A+ E+ + L +FD++ FK +NDT+GHL GD V Sbjct: 131 NMALLDSLTGLNNRTSFEQDLRQSIAMTERNNHGLILMIFDMNNFKQVNDTYGHLDGDNV 190 Query: 347 LMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSI---LKEIVHFQ--VGSIN 401 L + +LK I + YR GGDEFAVI T T E + LK +V + + N Sbjct: 191 LRRFSLLLKEAIRA-SDRCYRIGGDEFAVILTPATKESAQLVNERLKSLVAKDSLLSAHN 249 Query: 402 LSTSIGVAH----SNECPTVERLKMLADERLYKSKKNGR 436 +S+S+G N ER AD +Y++K R Sbjct: 250 ISSSVGCTTYRQGDNHMSIFER----ADRSMYRNKSRHR 284 >UniRef50_C1ZLY6 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZLY6_PLALI Length = 650 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 19/164 (11%) Query: 291 MYNSAFLDDLTKAMGRKSFDEDL-----KALPEKGGYLCLF-DVDKFKNINDTFGHLLGD 344 + A D LT RK FDE L + + +F DVD FKN+NDTFGH GD Sbjct: 338 LQQQALHDPLTGVHNRKFFDEVLLREVHRCVRAAQPLAVIFIDVDHFKNVNDTFGHQFGD 397 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT---LEELLSILKEIVH---FQVG 398 +VL +V +I + V + RFGG+EF V+ + + +E L ++E V F+ G Sbjct: 398 QVLKRVAQIFSETVRV-ADTLARFGGEEFVVLVSQPSEKGVERLAERIRENVEKEAFRFG 456 Query: 399 S------INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 S +++ +I + E +RL +ADE LY++K+NGR Sbjct: 457 STPVKITVSVGAAIAIPRRGETGIGDRLIAVADECLYEAKRNGR 500 >UniRef50_B9Y8S6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8S6_9FIRM Length = 342 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 11/155 (7%) Query: 293 NSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 +A D LT + R E L+ L K + L D+D FK INDT+GH+ GD VL + Sbjct: 189 EAASTDSLTGVLTRYGLKEQLELLQGKQAVIALGDLDDFKRINDTYGHICGDYVLATAAR 248 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSINLST 404 +++ +V R+GG+EF +I T E ++L I + I ++ Sbjct: 249 LMQETAGT---QVCRWGGEEFLIIMTEQPEREARAVLTGIAEKIRSYPFSYDGYQIRITM 305 Query: 405 SIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + G+ P E L LAD+R+Y+ K+ G+ QI Sbjct: 306 TFGMTSGEIGPDFESLVKLADQRMYQGKRQGKDQI 340 >UniRef50_A1TXD1 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXD1_MARAV Length = 504 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 87/179 (48%), Gaps = 20/179 (11%) Query: 277 GLFFSAADVKKLYS-MYNSAFLDDLTKAMGRK----SFDEDLKALPEKGGYLCL--FDVD 329 GL A + +L + N + D LT R+ DE L A G CL FD+D Sbjct: 315 GLLSGALERNRLEEDLLNQSIRDPLTGLHNRRYLMPRLDEILAASNRHGDRFCLAMFDID 374 Query: 330 KFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSIL 389 FK IND GHL GD+VLM+ +L + V RFGG+EF V++TG T E+ +++ Sbjct: 375 HFKRINDNLGHLAGDQVLMRFTDVLLAHTRT-TDVVSRFGGEEFLVVFTGVTEREVQTLV 433 Query: 390 KEIV------HFQVGSINLSTSIGVAH------SNECPTVERLKMLADERLYKSKKNGR 436 I+ + V L+ ++ ++E T E L AD+RLY++K GR Sbjct: 434 MRIMEAVREEEWLVDGKALTVTVSAGAVCVSELTDEPATPEALIARADDRLYQAKDGGR 492 >UniRef50_A0P262 Putative kinase/esterase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P262_9RHOB Length = 490 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 87/172 (50%), Gaps = 18/172 (10%) Query: 281 SAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL----PEKGGYLCLF-DVDKFKNIN 335 A VK L + N D LT R+ DE L L P G+ L+ D+D+FK+IN Sbjct: 304 QAEKVKDL--LANQVRSDPLTGLGNRRLLDEKLALLQDVKPLADGHALLYVDLDRFKDIN 361 Query: 336 DTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF 395 DT+GH GD VL+ V + L VD V R GGDEF +++ E +LS + IV Sbjct: 362 DTYGHETGDVVLLYVAEALTGLANVDD-TVVRLGGDEFVIVFGRARRERVLSTSRAIVEQ 420 Query: 396 QVGSINL-------STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 +NL S+GVA S E P+ L AD LY +K+ GRAQ++ Sbjct: 421 LSRPVNLDGATYTFGASVGVAFS-EKPS--ELLRKADVALYSAKRRGRAQVA 469 >UniRef50_A0NVH7 Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NVH7_9RHOB Length = 387 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 16/157 (10%) Query: 298 DDLTKAMGRKSFDEDLKAL----PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKI 353 D LT A R+ F L+ L P+ L FD+D FK +ND FGH+ GDE L++V Sbjct: 222 DPLTGAFNRREFQARLENLLKETPKDDFGLVHFDLDHFKQVNDRFGHVAGDEALVRVCSE 281 Query: 354 LKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSI---LKEIV-----HFQVGSINLSTS 405 +K+ + + R GG+EFAV+ + E + L+E + F NL+ S Sbjct: 282 VKAHLRQNDC-FARLGGEEFAVLLPSISRENAYRVAERLRERIAGLRFEFAPREFNLTAS 340 Query: 406 IGVAHSN--ECPTVERLKMLADERLYKSKKNGRAQIS 440 GV H N + P+ E LK + D+ LY+SK+ GR ++S Sbjct: 341 AGVYHGNGSKLPSNELLKTV-DQSLYQSKRTGRNRVS 376 >UniRef50_A6DD54 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DD54_9PROT Length = 508 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 19/187 (10%) Query: 267 NNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALP---EKGGY- 322 +N ER L + + VKKL + FL T +K+ E+LK ++ G Sbjct: 324 DNEIER-LKEKIKYLEKKVKKLSKEVKTDFL---TNIANKKAIMEELKRQESSFKRYGTN 379 Query: 323 --LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 + FD+D FKNINDT+GH GD V++K + +L + D + RFGG+EF I Sbjct: 380 YSVVFFDIDHFKNINDTYGHDAGD-VILKSLGLLFKRYARDVDMIGRFGGEEFVAILPNT 438 Query: 381 TLE---ELLSILKEIVH-----FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSK 432 ++ + L++IV ++ IN++ S GVA NE +++ LADERLYK+K Sbjct: 439 NIDGACKFAEKLRKIVEKTKFMYKNTRINVTVSGGVASRNETNSMDETLKLADERLYKAK 498 Query: 433 KNGRAQI 439 ++GR +I Sbjct: 499 RSGRNRI 505 >UniRef50_C8X3X4 Diguanylate cyclase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3X4_DESRD Length = 544 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/163 (36%), Positives = 83/163 (50%), Gaps = 18/163 (11%) Query: 291 MYNSAFLDDLTKAMGRKSFDEDLKAL----PEKG-GYLC-LFDVDKFKNINDTFGHLLGD 344 MY ++ D LT R+ DED+ L E+G G+ C L D+D FK INDT GH +GD Sbjct: 378 MYWASITDSLTGIFNRERLDEDMGLLIHRCHERGEGFACILVDIDYFKTINDTKGHTVGD 437 Query: 345 EVLMKVVKILKSQIPVDKG--KVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS--- 399 +VL++ ++L Q +G V+R+GG+EF ++ G L S L E V +G Sbjct: 438 QVLVEFARLLAQQ---SRGTDSVFRYGGEEFLMVLPGADLRG-ASQLAERVRAAIGGTRF 493 Query: 400 ---INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 LS S GVA E L AD LY +K GR ++ Sbjct: 494 AGETRLSASFGVAEYQLSDNWEGLLSRADTALYAAKAQGRNRV 536 >UniRef50_B9L6D0 Ggdef domain protein n=1 Tax=Nautilia profundicola AmH RepID=B9L6D0_NAUPA Length = 323 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/155 (37%), Positives = 79/155 (50%), Gaps = 14/155 (9%) Query: 285 VKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGD 344 +KK + N A+ D LT R+ F KA+ K G L +FD+D FK IND +GH +GD Sbjct: 170 IKKHQDLENQAYTDSLTNVYNRRGF---FKAIRNKKGVLGIFDLDDFKKINDMYGHKVGD 226 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL----LSILKEIVHFQVGSI 400 E L KILK Q + R GGDEF V++ G T ++ + I + Sbjct: 227 EYLKAFTKILK-QNTRKNDIIGRIGGDEFVVLFVGSTSTDIKNWAIKFYDTIERNSYNGL 285 Query: 401 NLSTSIGVA--HSNECPTVERLKMLADERLYKSKK 433 L S G + H N ++ MLADE+LYKSK+ Sbjct: 286 KLRVSSGFSEFHGN----IKESFMLADEKLYKSKE 316 >UniRef50_Q30UN0 Diguanylate cyclase (GGDEF domain) n=2 Tax=Campylobacterales RepID=Q30UN0_SULDN Length = 387 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 87/164 (53%), Gaps = 22/164 (13%) Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 Y AF D+LT GR++ ED+ L K + + D+D FK NDT+GH GDEVL Sbjct: 227 YRLAFYDELTALPGRRALIEDMAKLGMKYSF-AMIDIDHFKKFNDTYGHDTGDEVL---- 281 Query: 352 KILKSQIPV--DKGKVYRFGGDEFAVIYTGGTLEELLS---ILKEIVH---FQVGS---- 399 K++ S++ GK YR+GG+EF V++ L+E IL+EI+ F V + Sbjct: 282 KMVASKLAEVGGGGKAYRYGGEEFVVLFPSRELDESYKSTDILREIISKSPFVVRNKQSS 341 Query: 400 ----INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 IN+S+ + S + +K AD LYK+KK GR Q+ Sbjct: 342 KTIYINISSGVVQKTSQDKDPFAVMKR-ADNALYKAKKAGRNQV 384 >UniRef50_Q317L8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q317L8_DESDG Length = 411 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 89/170 (52%), Gaps = 27/170 (15%) Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLC--LFDVDKFKNINDTFGHLLGDEVLMK 349 Y+ AF+D+LT+ R++ D K L GG C + DVD FK NDT+GH +GD+VL Sbjct: 246 YSMAFVDELTEVPSRRALMADAKKL---GGSYCVAMADVDHFKAFNDTYGHDVGDDVLRM 302 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------VHFQV------ 397 V L VD GKVYR+GG+EF +++ E L+ + + F++ Sbjct: 303 VAARLAG---VDGGKVYRYGGEEFTILFPRLGRAEARPHLEAVREAVAAIPFRIRTRNKS 359 Query: 398 ------GSINLSTSIGVAHSNECP-TVERLKMLADERLYKSKKNGRAQIS 440 S+ ++ SIG+A + E + AD+ LYK+KK GR +++ Sbjct: 360 AKVVRDKSVTVTVSIGLAQREDGEDDFESVLKKADKALYKAKKAGRNKVA 409 >UniRef50_A7VC05 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VC05_9CLOT Length = 382 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 88/152 (57%), Gaps = 14/152 (9%) Query: 298 DDLTKAMGRKSFDEDL----KALPEKG--GYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LT R+SF+E L + E G Y+ +FD+D FKN+NDT+GH GD V+ + Sbjct: 225 DPLTGLYNRRSFEESLEKEIQRTEETGEKAYIAIFDIDHFKNVNDTYGHSNGDVVIKALC 284 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------VHFQ-VGSINLST 404 K+LK + D G +R+GG+EF +++ L +++++++++ +FQ + + ++ Sbjct: 285 KMLKEK-SKDYGLAFRYGGEEFVILFNNIELPKVINVVEDVRTEFRCYYFQFMNNSGITC 343 Query: 405 SIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 S GVA ++ + + AD LY++K+ GR Sbjct: 344 SCGVAEYSKGESAKAWFNRADNSLYQAKEAGR 375 >UniRef50_A5F8G7 GGDEF family protein n=31 Tax=Vibrio RepID=A5F8G7_VIBC3 Length = 976 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 18/162 (11%) Query: 298 DDLTKAMGRKSFDEDLKAL------PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 DDLT R++FD LK P++ + L D+D FK IND + H++GD+ ++ V Sbjct: 810 DDLTGLANRRAFDMYLKQAFSRLQNPDQQVSIALLDIDHFKQINDRYSHIIGDQAIVAVS 869 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTG------GTLEELLSILKEIVHFQVG-SINLST 404 + L + DK +V R+GG+EF ++Y G G E+L ++++ V +N++ Sbjct: 870 QELLGYVG-DKTRVARWGGEEFTILYVGDPKQAWGYFEKLRCKIEQVDLSAVAPGLNVTV 928 Query: 405 SIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI----SWQ 442 SIG A + + + E + LAD L +KK GR ++ WQ Sbjct: 929 SIGFADAQQAESYETVLKLADHALLTAKKLGRNRVVKSEEWQ 970 >UniRef50_A6WF17 Diguanylate cyclase/phosphodiesterase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WF17_KINRD Length = 761 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 81/165 (49%), Gaps = 17/165 (10%) Query: 291 MYNSAFLDDLTKAMGRKSF----DEDLKALPEKGG---YLCLFDVDKFKNINDTFGHLLG 343 + + A D LT +GR F +EDL A GG +L D+D FK +NDT GH G Sbjct: 322 LEHRATHDALTDLLGRDEFTRRVEEDLTASRGPGGPGVHLLFVDLDGFKRVNDTHGHGAG 381 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT------LEELLSILKEIVHFQV 397 DE+L +V L++ P + R GDEF V TGG +LL L+ V V Sbjct: 382 DELLCEVAARLRALAP-PHAVIGRLAGDEFVVAATGGVDTAVGLARDLLDGLRTPVPLPV 440 Query: 398 GSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ-ISW 441 G + +S S+G+A V + AD +Y++K GR Q + W Sbjct: 441 GEVVVSASLGIAEVTTSLAVALRE--ADAAMYRAKSRGRNQFVVW 483 >UniRef50_C1XK82 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XK82_MEIRU Length = 741 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/163 (34%), Positives = 83/163 (50%), Gaps = 14/163 (8%) Query: 284 DVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNINDT 337 +++ +M +A D LT R++FD L+ E+ L + D+ FK IND Sbjct: 569 ELQSREAMEKAALTDSLTGLYNRRAFDRRLREECERAARYQYPLTLLVVDLKNFKPINDR 628 Query: 338 FGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLS-----ILKEI 392 GH++GD+ L+ V + L SQ V+R+GGDEFAV+ T +E+ IL+ I Sbjct: 629 LGHVMGDQALVAVARAL-SQTQRAGDMVFRWGGDEFAVLLP-QTPKEVAGVVGARILEAI 686 Query: 393 VHFQVGSINLSTSIGVAH-SNECPTVERLKMLADERLYKSKKN 434 +G + LS +IG A E T E L LAD+R+Y K Sbjct: 687 SKICMGGVCLSANIGYASFPTEAQTAEALLQLADQRMYADKSE 729 >UniRef50_Q2BMY9 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMY9_9GAMM Length = 610 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 81/159 (50%), Gaps = 18/159 (11%) Query: 298 DDLTKAMGRKSF----DEDLKALPEKGGYLC--LFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LT + R++ E+L+ G LC L D+D FK IND FGH +GD VL + Sbjct: 453 DPLTGCLNRRALFSAAREELRRASRSGSKLCVCLMDLDYFKRINDRFGHQVGDNVLREFS 512 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINL--------- 402 ++ S + V+ K R GG+EFAV+ G LE + + E + +V I L Sbjct: 513 SVVNSCLRVE-DKFGRIGGEEFAVLLIGSGLESAVEV-AERIRMEVMKIALQGIEHEDLE 570 Query: 403 -STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + SIGV+ E E+ ADE++YK+K GR Q+ Sbjct: 571 VTVSIGVSEWAEVEPFEQALSRADEKMYKAKNMGRNQVQ 609 >UniRef50_B6BMK7 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BMK7_9PROT Length = 620 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/155 (38%), Positives = 87/155 (56%), Gaps = 20/155 (12%) Query: 298 DDLTKAMGRKSFDEDLKAL-----PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 D LT A+ R+ FD ++K++ PEK G + L D+D FK++NDT+GH GD VL + Sbjct: 468 DKLTGALNREFFDNNIKSIIKDMYPEKMG-IVLCDIDHFKDVNDTYGHNRGDNVLKEFTT 526 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELL----SILKEIVHF---QVGSINLSTS 405 I+K I D + R+GG+EF V+ T++ L + K I + +VG+I S Sbjct: 527 IIKDSIR-DSDYLIRWGGEEFIVLMKVNTIDSLQRATEHMRKHIESYKFEEVGTITSSFG 585 Query: 406 IGVAHSNE--CPTVERLKMLADERLYKSKKNGRAQ 438 I + NE T+ER+ D+ LYK+K NGR Q Sbjct: 586 ITLHIENEKILDTLERV----DKALYKAKNNGRNQ 616 >UniRef50_D0I2V0 GGDEF family protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I2V0_VIBHO Length = 341 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 83/168 (49%), Gaps = 18/168 (10%) Query: 288 LYSMYNSAFLDDLTKAMGRKSFDEDLKAL----PEKGGYLCLFDVDKFKNINDTFGHLLG 343 L+ A D LT R++ D +L+AL P KG L L D+D FK NDT+GHL+G Sbjct: 172 LHKANEEALHDALTGIYNRRALDAELEALVATPPPKGFSLLLCDLDHFKRFNDTYGHLMG 231 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI--- 400 D+VL K L S D K YR+GG+EFA++ L + E + + + Sbjct: 232 DQVLKLTAKRL-SDYCRDGIKAYRYGGEEFALLVPNRPLSGACRV-AETIRATIDKLALK 289 Query: 401 ---------NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 N+S SIGVA ++ L AD +LY +KK GR ++ Sbjct: 290 DKRTGKKLDNISISIGVAAFEHGESIRDLISRADTQLYDAKKLGRNRV 337 >UniRef50_Q2BN01 GGDEF domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BN01_9GAMM Length = 379 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 36/205 (17%) Query: 265 IINNHFERVLDGGLFFSAA----DVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKG 320 I+ + F + + GLF SA+ + + + Y AF+D+LT R++ + L L +K Sbjct: 154 IMLSWFNQPMISGLFVSASLIALAISVVQNSYRMAFIDELTSIPARRALQDKLSTLGKKY 213 Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 L + D+D FK NDT+GH +GD+VL K+V +Q+ GK YR+GG+EF +++ G Sbjct: 214 T-LAMCDIDHFKKFNDTYGHDVGDQVL-KMVAAKLNQVS-GGGKAYRYGGEEFTLVFPGK 270 Query: 381 TLEELLSILKEI--------VHFQVGS--------------------INLSTSIGVAH-S 411 E L ++++ +H + + ++++ SIG + Sbjct: 271 NEAEALPYIEQLRETIANYPMHIRNQNRPDDNEQGQKMRSKEDDSEIVSVTISIGFCEKT 330 Query: 412 NECPTVERLKMLADERLYKSKKNGR 436 E P + ADE LY SKKNGR Sbjct: 331 AEIPDPHAVIKKADEALYTSKKNGR 355 >UniRef50_C0EU57 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EU57_9FIRM Length = 455 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 82/156 (52%), Gaps = 17/156 (10%) Query: 297 LDDLTKAMGRKSF----------DEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEV 346 +D LT MGR+ F +D+ ++ G+ D+D FK INDT GH +GDE Sbjct: 295 MDALTNVMGRRLFLNYCTKCQNDRDDIDNKSKRKGWFLFIDIDWFKQINDTLGHTVGDET 354 Query: 347 LMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG-TLEELLSILKEIVHFQVGSI----N 401 L ++ + LK+ I G V R GGDEFAVI T E+L LK+ + + +I Sbjct: 355 LKQIAESLKN-IFSSYGAVGRVGGDEFAVIINEKMTKEQLEEQLKKFL-LDISAILPERT 412 Query: 402 LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRA 437 +S SIGV H + + L D+ LYK+K+ GRA Sbjct: 413 VSCSIGVYHFGFPKSQKELLTRTDDALYKAKEKGRA 448 >UniRef50_A4BK52 GGDEF domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BK52_9GAMM Length = 402 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 31/170 (18%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKIL 354 A++D+LT GRK+ + L L + + + DVD FK NDT+GH +GD+VL V + Sbjct: 230 AYMDELTGIPGRKALQKQLAGLGRRYA-IAMLDVDHFKAFNDTYGHDVGDQVLRLVAARV 288 Query: 355 KSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVG---------------- 398 ++ G+ YR+GG+EF +++ G T ++ + L+ + G Sbjct: 289 RAV--SHGGRAYRYGGEEFTIVFPGKTAQQAVPALESVRESIAGYTLQLRQEDRPDDDKV 346 Query: 399 -----------SINLSTSIGVAHSNECPTVERLKM-LADERLYKSKKNGR 436 +N++ SIGVA + T + M AD+ LYK+KK GR Sbjct: 347 GRNQRGKPKGRGVNVTISIGVAEPADDLTEPKAVMKAADQLLYKAKKAGR 396 >UniRef50_Q15PL7 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PL7_PSEA6 Length = 300 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 90/164 (54%), Gaps = 16/164 (9%) Query: 295 AFLDDLTKAMGRKSFDEDL---KALPEKGGY---LCLFDVDKFKNINDTFGHLLGDEVLM 348 A+ D LT+ R+ FDE L + L ++ G L +FD+D FK ND +GHL GD+ L Sbjct: 137 AYQDGLTQVSNRRYFDEYLLRQQKLSQRSGSFFALLMFDIDFFKYYNDHYGHLAGDDCLR 196 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIY-----TGGTL--EELLSILKEIVHFQVGSI- 400 V K+LK + V RFGG+EFAV+ G L +LL+ ++E+ GS Sbjct: 197 LVAKVLKQSVERPGDFVARFGGEEFAVVLPETGIAGAILVATKLLTSVRELGIKHKGSPF 256 Query: 401 -NLSTSIGVAHSNEC-PTVERLKMLADERLYKSKKNGRAQISWQ 442 ++ SIG+A S+ T++ L AD RLY +K NGR Q + Q Sbjct: 257 GVVTGSIGIAASDGGKKTLQELIDTADRRLYLAKTNGRDQFASQ 300 >UniRef50_Q1N3P2 Probable two-component response regulator n=1 Tax=Bermanella marisrubri RepID=Q1N3P2_9GAMM Length = 364 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 74/158 (46%), Gaps = 16/158 (10%) Query: 298 DDLTKAMGRKSFDE------DLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LT R+ FD DL + E + D+D FK IND FGHL GD+VL Sbjct: 194 DTLTGIYNRQYFDNALDMQWDLASRSENSLSILFLDLDHFKKINDNFGHLAGDQVLCHAA 253 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF--------QVGSINLS 403 + + R+GG+EFA+I ++ L + ++I H G I+L+ Sbjct: 254 HLFSEIARRKTDMIARYGGEEFAIILPATEKQDALDLAEQIRHAIENTPCRSDQGLIHLT 313 Query: 404 TSIGVAHSNECPTVERLKML--ADERLYKSKKNGRAQI 439 SIGV P + L AD+ LY++K NGR QI Sbjct: 314 VSIGVNSVVPSPQGSPVTFLDQADQALYQAKNNGRNQI 351 >UniRef50_A0KN72 GGDEF, putative n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KN72_AERHH Length = 517 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 15/148 (10%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGG--YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILK 355 D LT M R++F + L E +L LFDVD FK IND +GH +GD VL +V ++L Sbjct: 352 DPLTGIMNRRAFTQRRSELEESATPHWLLLFDVDNFKRINDNWGHTVGDGVLCRVAELLV 411 Query: 356 SQIPVDKGKVYRFGGDEFAVI--YTGGTLEELLS-ILKEIVHFQVGSIN--LSTSIGVAH 410 +++ G VYR GGDEFA + + LE LS +L + + Q ++ S+G AH Sbjct: 412 AEL--GSGCVYRIGGDEFAALLPWPRSELESGLSRLLARVRNQQWREFREAVTLSVGGAH 469 Query: 411 SNECPTV--ERLKMLADERLYKSKKNGR 436 S + + ER+ DE LY+SK+ GR Sbjct: 470 SPDDGVLLFERV----DECLYRSKRLGR 493 >UniRef50_A3Y4T8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Marinomonas sp. MED121 RepID=A3Y4T8_9GAMM Length = 834 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 74/132 (56%), Gaps = 11/132 (8%) Query: 314 KALPEKGGYLCLF-DVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDE 372 KA +KG + LF DVD+FKN+ND GH +GD++L ++ K L+ + D G V R GGDE Sbjct: 425 KAKQDKGKFGLLFLDVDQFKNVNDNLGHAMGDQLLKQIAKRLRETVASD-GIVARLGGDE 483 Query: 373 FAVIYTG----GTL----EELLSILKEIVHFQVGSINLSTSIGVA-HSNECPTVERLKML 423 F +IY GTL EEL IL + + S+ +SIGV + T+E L Sbjct: 484 FMIIYPDEDHLGTLQDRAEELNDILNQPFELNMTSVLAGSSIGVCLYPQHGDTLETLVSN 543 Query: 424 ADERLYKSKKNG 435 AD +Y SK+ G Sbjct: 544 ADVAMYHSKRKG 555 >UniRef50_A6T3X3 Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T3X3_JANMA Length = 356 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 90/181 (49%), Gaps = 36/181 (19%) Query: 290 SMYNSAFLDDLTKAMGRKSFDED----LKALPE-------------------KGGYLCLF 326 S+ + + D LT + RK+FDE + A P K +L + Sbjct: 150 SLLDYSERDSLTGLLNRKTFDEKFARMVNAKPSESVARDDEGREERRHHADVKSQWLAVI 209 Query: 327 DVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL---- 382 D+D FK +ND FGHL GDEVL+ V +L++ + +V+RFGG+EF V+ TL Sbjct: 210 DIDHFKRVNDQFGHLYGDEVLILVANVLRTSFRA-QDRVFRFGGEEFVVLLRSATLADAQ 268 Query: 383 ---EELLSILKEIVHFQVGSINLSTSIGVAH-SNECPTVERLKMLADERLYKSKKNGRAQ 438 E + +++ Q+G I + SIG A S E P V + AD+ LY +K +GR Q Sbjct: 269 MVFERFRTSIEQHSFPQIGQI--TVSIGFASISQETPVV--ILGHADQALYYAKDHGRNQ 324 Query: 439 I 439 + Sbjct: 325 V 325 >UniRef50_A3Y705 GGDEF domain protein n=2 Tax=Oceanospirillaceae RepID=A3Y705_9GAMM Length = 410 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 22/165 (13%) Query: 295 AFLDDLTKAMGRKSFDEDL-KALPEKGG-----YLCLFDVDKFKNINDTFGHLLGDEVLM 348 A D LTK + R+ F E +AL E+ LC+ D+D+FK +NDT GH GD+ L+ Sbjct: 242 AHFDPLTKLINRRYFFELFDQALDEQNNTKPPLQLCICDLDQFKGVNDTLGHQAGDKALI 301 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI---------VHFQVGS 399 K +IL S++ ++G V RFGGDEF + + + +E ++L+ I S Sbjct: 302 KFAEIL-SEVMTNQGIVGRFGGDEFVICFIDKSRQECENLLETIRARLEKTVFTLDNASS 360 Query: 400 INLSTSIGVAHSNECPTVERLKM-----LADERLYKSKKNGRAQI 439 +++ + GVAH E +L M AD+ LY +K+NGR Q+ Sbjct: 361 FSITGTFGVAHL-EGGQKTKLSMNHLFETADKALYIAKQNGRNQV 404 >UniRef50_B1HWA5 Putative diguanylate cyclase (GGDEF domain) n=2 Tax=Bacillaceae RepID=B1HWA5_LYSSC Length = 325 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 80/155 (51%), Gaps = 15/155 (9%) Query: 298 DDLTKAMGRKSFDEDLKAL------PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LT R+ F E L+ K LC+ D+D FK +NDTFGH +GD+VL ++ Sbjct: 168 DKLTGLKNRRFFQEKLEQQLNSYYESAKPFSLCILDIDHFKKVNDTFGHQVGDDVLAQLA 227 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV------HFQVGSINLSTS 405 ++L +Q + V R+GG+EF +I + I ++I H+ VG + +S Sbjct: 228 QLL-TQRARKEDTVVRYGGEEFVMILPETEIAAAKEIGEQIRKTVALDHWPVGQVTISIG 286 Query: 406 IGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + S + T L AD+ LY SKKNGR Q++ Sbjct: 287 LATVTSKDTGTT--LLKNADDALYASKKNGRNQVT 319 >UniRef50_C9AU95 GGDEF domain-containing protein n=3 Tax=Enterococcus casseliflavus RepID=C9AU95_ENTCA Length = 350 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 85/153 (55%), Gaps = 11/153 (7%) Query: 297 LDDLTKAMGRKSFDEDLKAL--PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKIL 354 +DDLT+ + F +D + L E + L D+D FKN ND +GH GD +L ++ +I Sbjct: 196 IDDLTQLNNFRKFQDDRQRLDTTEVDLSIALIDIDHFKNYNDRYGHRAGDVILQEIARIF 255 Query: 355 KSQIPVDKGKVYRFGGDEFAVIYTGGT------LEELLSILK--EIVHFQVGSINLSTSI 406 + VYR GG+EFA++ G LE++ ++ EI+ S++++ SI Sbjct: 256 STYCTA-SNPVYRIGGEEFAILIQGDAQAAAYLLEKIQKRIRYQEIILDAGDSVSITLSI 314 Query: 407 GVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 G+A + +++ + AD+ LY++K++GR Q+ Sbjct: 315 GIAQRQKGELLQQTQERADQALYRAKRSGRDQL 347 >UniRef50_C6D4J1 Diguanylate cyclase with GAF sensor n=2 Tax=Paenibacillus RepID=C6D4J1_PAESJ Length = 653 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 10/150 (6%) Query: 298 DDLTKAMGRKSFDEDLKALPEKG--GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILK 355 D+LT R +E +++ K G L L D+D FK INDTFGH +GD++L++V I++ Sbjct: 500 DNLTGLHARHYLNEQIQSRQRKDPLGALILVDIDHFKQINDTFGHQVGDQILVQVSSIIR 559 Query: 356 SQIPVDKGKV-YRFGGDEFAVIYTGGTLEELLSILKEI-VHFQVGSINLST-SIGVAH-- 410 S I +G + R+GG+E AV G E+ I + I H + + + T S GV+ Sbjct: 560 SSI--RQGDIAARWGGEELAVYLPGIRSEQAYRIAERIRTHVEAETQPVVTVSCGVSEWT 617 Query: 411 -SNECPTVERLKMLADERLYKSKKNGRAQI 439 NE +VE L AD LY++K NGR +I Sbjct: 618 FENEKISVESLFYRADMALYEAKNNGRNRI 647 >UniRef50_C0QUK0 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QUK0_PERMH Length = 636 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 117/216 (54%), Gaps = 18/216 (8%) Query: 237 ALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAF 296 A++A+ A + ++ +IN + E I+ F V + + A +K +Y + A+ Sbjct: 172 AILAIDYSAKTIKEIKEIINTTKILIEGILVTSF--VFLNIIIYGA--IKNIY-LRKKAY 226 Query: 297 LDDLTKAMGRKSFDEDLKALPEKGGY-LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILK 355 +D+LTK R ++ ED+ +L Y + L D+D FK INDT+GH +GD VL K+ + +K Sbjct: 227 IDNLTKTYNR-NYLEDMASLLNPASYHVALIDLDDFKKINDTYGHDVGDLVLKKIAETIK 285 Query: 356 SQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSI------LKEIVHFQVG----SINLSTS 405 S + D+ V R+GG+EF V+ G ++ SI L++I + ++ I+++ S Sbjct: 286 SSVRKDEDIVIRYGGEEFLVLIKAGRKDKKASINAAERLLRDIRNRKIDINGEEISVTAS 345 Query: 406 IGVA-HSNECPTVERLKMLADERLYKSKKNGRAQIS 440 IG+ ++ ++ +D LY++K NG+ +I Sbjct: 346 IGLNIYTERSHSIYDAIKKSDIALYQAKANGKNRIE 381 >UniRef50_C5SH16 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SH16_9CAUL Length = 763 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 12/126 (9%) Query: 323 LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT- 381 L L D+D+FK +NDT GH++GDEVL+ V + L+ D + R GGDEF + G T Sbjct: 358 LHLIDLDRFKEVNDTMGHMVGDEVLITVAETLRDLASPDD-VLARLGGDEFVFLQVGVTQ 416 Query: 382 -------LEELLSILKEIVHFQVG--SINLSTSIGVA-HSNECPTVERLKMLADERLYKS 431 E L+ L+ +H Q G + ++ S+G A + +E PT++RL AD LYK+ Sbjct: 417 RAQAEAKAEALVKALQAEMHAQFGPQAPDVGASLGFALYPDEGPTLDRLTRHADMALYKA 476 Query: 432 KKNGRA 437 K +GR Sbjct: 477 KTDGRG 482 >UniRef50_A5GBU3 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GBU3_GEOUR Length = 412 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 36/196 (18%) Query: 278 LFFSAA----DVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKN 333 +F SAA V L +N A+ DDLT R++ +E + + + + + DVD FK+ Sbjct: 219 VFISAAALILSVSVLQDSHNMAYRDDLTGLPSRRALNEQMLGVGRQY-VIAMLDVDHFKS 277 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE-- 391 ND++GH +GD+VL V K K GK YR+GG+EF ++ + E + L+E Sbjct: 278 FNDSYGHDVGDQVLKMVAK--KMAAVKGGGKAYRYGGEEFTILMPRKKMAEAIPFLEEVR 335 Query: 392 --IVHFQV------------------------GSINLSTSIGVAHSNEC-PTVERLKMLA 424 I +Q+ S++++ SIGVA S++ + E + A Sbjct: 336 KNIATYQLVLRGNDRPKEAKEGKKLRASERGDKSVSVTISIGVAESSDSLRSAEEVLKAA 395 Query: 425 DERLYKSKKNGRAQIS 440 D+ LY++K GR Q+S Sbjct: 396 DKALYRAKSKGRNQLS 411 >UniRef50_A1SZ67 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZ67_PSYIN Length = 409 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 12/174 (6%) Query: 277 GLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCL--FDVDKFKNI 334 L+ + L +Y + +D LTK + R+ EK CL FD+D+FK I Sbjct: 226 SLWLQVGQLSMLMKLYRESTVDPLTKLINRRVLFRLAANDLEKQSNFCLIMFDLDRFKRI 285 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI-- 392 NDT+GH +GD+VL+ + ++++ ++ V RFGG+EF I LE+ I + I Sbjct: 286 NDTYGHGVGDKVLVSIAQVIQRELR-QSDIVARFGGEEFVAILPEIGLEQATRIGQRIRR 344 Query: 393 ------VHFQVG-SINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 V G I ++SIGV +++ AD+ LY +K+NGR Q+ Sbjct: 345 MISQESVQLTDGLVIKTTSSIGVTQKRVNESLDETLKRADDFLYYAKENGRNQV 398 >UniRef50_D0YWB6 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YWB6_LISDA Length = 286 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 26/189 (13%) Query: 262 KEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK---ALPE 318 +E + +H+ R+ G L +A + +++ M A D L+ R F++D+ A+ E Sbjct: 107 EEQTLLHHYHRLFAGSLN-NALEFRRIKKM---ALRDHLSDLGNRACFEQDIHHALAISE 162 Query: 319 K---GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAV 375 + G L +FD+D FK +ND +GHL GD+V+ K LK + + YR GGDEF Sbjct: 163 RRAVGLTLVIFDLDNFKQVNDRYGHLNGDKVIRSFSKALKESVRA-SDRCYRLGGDEFIA 221 Query: 376 IYTGGTLE----------ELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLAD 425 + T + E LSI + HF +G TS G A+ ++ T L AD Sbjct: 222 LLQPSTEQSAEKVTLRVIEALSIHPILQHFNIG-----TSFGYANYHDGDTSASLIERAD 276 Query: 426 ERLYKSKKN 434 RLY K+N Sbjct: 277 RRLYYHKRN 285 >UniRef50_C4V1U7 Possible diguanylate cyclase (GGDEF) n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1U7_9FIRM Length = 573 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 19/209 (9%) Query: 239 VAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLD 298 V + S + + L+ VI ++E+ A++ + L+ SAA L YN L+ Sbjct: 369 VTIFSIYAMVPLIFHVIRLQMMEQAAMVRKNEVLALELAASQSAAQRDFLTGCYNRHQLE 428 Query: 299 DLTKAMGRKSFDEDLKALPEKGGY---LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILK 355 G ++F E L + G+ +FD+D FK INDT GHL GD VL ++ I+ Sbjct: 429 S-----GFENFAE----LARERGFKFSFAIFDIDHFKTINDTRGHLAGDHVLKEIAGIIH 479 Query: 356 SQIPVDKGKVY-RFGGDEFAVIYTGGTLEELLSI---LKEIVHFQVGSINLSTSIGVAHS 411 +I D+ ++ R+GGDEF ++ L+ +++ L+ I+ ++G + LS + H Sbjct: 480 DEI--DRRHLFIRYGGDEFVLLGLHYDLDAMVAFCDHLRGILEHRLGGVTLSFGVSTWHG 537 Query: 412 NECPTVERLKMLADERLYKSKKNGRAQIS 440 + P + L AD LY+SKK GR +S Sbjct: 538 ADDP-LSDLIARADRALYRSKKKGRNTVS 565 >UniRef50_B7KF34 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KF34_CYAP7 Length = 620 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 74/246 (30%), Positives = 119/246 (48%), Gaps = 38/246 (15%) Query: 225 YLRVCTLIIFFAALVAVISGASCLY------LVRRVINRGIVEKEAIINNHFE-RVLDGG 277 ++ + +L+I+ + L ++ A Y L +VI R KE +N+ E +++ Sbjct: 382 FIGLISLVIYLSGLNRKLNHARLAYSELNASLETKVIERTAELKE--VNSRLEAEIIERS 439 Query: 278 LFFSAADVKKLYSMYNS-AFLDDLTKAMGRKSFDEDLKA---------LPEKGGYLCLFD 327 + A+ ++L + N + +D+LT R+SFD LK LP L L D Sbjct: 440 Q--AEAEKERLIAKLNRLSHIDNLTSLANRRSFDLYLKQEWNRHYRTQLPLS---LILCD 494 Query: 328 VDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLS 387 +D FK +NDT+GH GDE L +V K+LK R+GG+EFA+I LE + Sbjct: 495 IDYFKKLNDTYGHQAGDECLKRVAKVLKKHTKRSSDLAARYGGEEFAIILPETDLEGAI- 553 Query: 388 ILKEIVHFQVGSINL-----------STSIGVAH--SNECPTVERLKMLADERLYKSKKN 434 L E + + S+ + S + GVA + +++ L LAD+ LY+ K N Sbjct: 554 FLAESIKDNIKSLRIPNSASLVKPFVSMTFGVATMVPTQHQSLDILISLADQALYRGKNN 613 Query: 435 GRAQIS 440 GR Q+S Sbjct: 614 GRDQVS 619 >UniRef50_UPI0001826481 hypothetical protein EcanA3_13727 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826481 Length = 501 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 85/154 (55%), Gaps = 8/154 (5%) Query: 293 NSAFLDDLTKAMGRKSFDEDL-KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 + A D LT R++FD D + E +L + D+D FK INDT+GH +GD VL V Sbjct: 346 HEALTDGLTGLKNRRAFDADAARCNSEPNTHLAMVDIDNFKMINDTWGHTVGDLVLKTVA 405 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE------IVHFQVGSINLSTS 405 ++ ++ +YR+GG+EFAV++ G + E+ LS L++ F+ +N+S S Sbjct: 406 ELGSRLRGLENITLYRYGGEEFAVLFQGISAEKALSYLEKWRITVNTRSFREHDLNVSFS 465 Query: 406 IGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 G+ + L AD+ LY++KK+G+ +I Sbjct: 466 AGLCKMGGTSLPDTLGR-ADKLLYQAKKSGKNKI 498 >UniRef50_B5XYF0 Diguanylate cyclase n=6 Tax=Proteobacteria RepID=B5XYF0_KLEP3 Length = 510 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 89/155 (57%), Gaps = 11/155 (7%) Query: 294 SAFLDDLTKAMGRKSFDEDLKAL--PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 A +D LT R++FD D+ AL + L L D+D FK+INDT+GHL GD VL V Sbjct: 355 QATIDALTGCKNRRAFDSDIAALMNDHQPFALALVDIDNFKSINDTWGHLNGDIVLRNVA 414 Query: 352 KI-LKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK------EIVHFQVGSINLST 404 + L+ P++ +YR+GG+EFAV++ ++ ++L+ E ++ + ++ Sbjct: 415 REGLQVLQPLEIS-LYRYGGEEFAVVFPAEHIDNARTLLETWRVNVERRTWREDGLTVTF 473 Query: 405 SIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 S G+ N P +++L + DE LYK+K+ G+ +I Sbjct: 474 SAGLGEWNMEP-LDKLVVSVDEALYKAKQQGKNRI 507 >UniRef50_A1HRZ7 Diguanylate cyclase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRZ7_9FIRM Length = 794 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/177 (35%), Positives = 98/177 (55%), Gaps = 29/177 (16%) Query: 290 SMYNS----AFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTFG 339 ++YN A D LT R++FD LKA ++ L +FD+DKFK NDT+G Sbjct: 613 NLYNQVKAMALSDGLTGLANRRNFDMFLKAELRRSFTLKRPLSLIMFDLDKFKTYNDTYG 672 Query: 340 HLLGDEVLMKVVKILKSQI-PVDKGKVYRFGGDEFAVIYTGGTLEELLSI---LKEIV-- 393 HL GD++L ++ +IL+ + +D R+GG+EF++I T E L+I L++IV Sbjct: 673 HLTGDKLLAQIGEILRHNVRSIDLPA--RYGGEEFSIILPECTNAEALAIAEKLRQIVEE 730 Query: 394 -HF--QVGSIN--LSTSIGVA------HSNECPTVERLKMLADERLYKSKKNGRAQI 439 HF +G+ ++ S+GVA S P +E L AD+ LY++K+ GR ++ Sbjct: 731 THFPDNLGAFTARITASLGVATYDPAITSGGVPDMEDLIAWADKALYQAKQQGRNRV 787 >UniRef50_Q15QF9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QF9_PSEA6 Length = 666 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 12/161 (7%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKALPEK---GGYLCLFDVDKFKNINDTFGHLLGDEV 346 ++++ A D LT+ R++F+ +L + + +LC D+D FK INDT GH GDE+ Sbjct: 246 TLFHQASHDPLTELQNRRAFERNLHEIMDDRRLSYFLCFIDLDYFKTINDTCGHAAGDEI 305 Query: 347 LMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVG 398 L+KV +ILK+ + + V R GGDEF+++ + L I I H++ Sbjct: 306 LVKVARILKANVRSND-IVARLGGDEFSILIKDCPFDNALQIANNIKENIRGLTYHWEGE 364 Query: 399 SINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + +LS SIGVA T L AD +K GR + Sbjct: 365 TFHLSASIGVAPKVHGSTTTELLNSADVACGIAKNAGRNTV 405 >UniRef50_A1SVZ1 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SVZ1_PSYIN Length = 477 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 16/176 (9%) Query: 279 FFSAADVKKLY-SMYNSAFLDDLTKAMGRKSFDEDLKA----LPEKGGYLCL--FDVDKF 331 F V K Y M + A D LT R++F+E+L+ + +L L FD+D F Sbjct: 300 FLILKTVNKYYKEMEHLAKYDALTNLKNRRAFNEELEHSLLLCKRRASHLSLTFFDLDDF 359 Query: 332 KNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE 391 K++NDTFGH GD+VL V ILK I + R+GG+EF V + LE+ I ++ Sbjct: 360 KSVNDTFGHQTGDKVLQYVADILKDDIR-QTDIIGRWGGEEFIVAFIDTELEDAKFITEK 418 Query: 392 I-VHF-------QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 I H Q+ ++ ++ S G+ T++ L AD+ LYK+K+NG+ Q+ Sbjct: 419 IRAHIEKDSFLSQLKNMKVTASFGLTTITTQDTLDSLLERADQALYKAKENGKNQV 474 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/153 (35%), Positives = 85/153 (55%), Gaps = 15/153 (9%) Query: 298 DDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LT+ R++FDE L+ E+ L + DVD FK+IND F H++GD+VL+++ Sbjct: 842 DSLTQLGNRRAFDEQLQYEFKRCERSEQPLSLAIIDVDHFKSINDRFLHVIGDQVLIELS 901 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------VHFQ--VGSINLS 403 +L S + D + R+GG+EFA++ T +E L + I +Q + ++ Sbjct: 902 ALL-SNMLRDIDYIARWGGEEFALLMPETTAKEALQAAERIRQRIEDTSYQHLADELAVT 960 Query: 404 TSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 SIGVA S P L + AD+ LYK+K++GR Sbjct: 961 VSIGVASSEHYPNHSALLVAADKALYKAKQSGR 993 >UniRef50_A4CF43 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CF43_9GAMM Length = 603 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 20/161 (12%) Query: 297 LDDLTKAMGRKSFDEDL-----KALPEKGGY-LCLFDVDKFKNINDTFGHLLGDEVLMKV 350 LD LT R FD+ L ++ E+ + + D+D FK INDTFGHL GD+ + V Sbjct: 435 LDSLTGIRNRSYFDKKLTMEFRRSHREQTPLAVMMLDIDFFKKINDTFGHLAGDDAIRFV 494 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINL 402 +++ + +V R+GG+EFAVI E L + + I VH G IN+ Sbjct: 495 AHTIQTSLKRPSDEVCRYGGEEFAVILPNTDTEGALLVAEAIRAQISEAQVHTTAGIINM 554 Query: 403 STSIG----VAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + S+G +A N P + LAD+ LY++K GR Q+ Sbjct: 555 TISVGLFSDIAQRNHEPN--QYTALADKALYQAKHAGRNQV 593 >UniRef50_C4L084 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L084_EXISA Length = 1055 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 5/158 (3%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDL--KALPEKGGYLCLFDVDKFKNINDTFGHLLG 343 +K M A D LTK R + DL K L L ++D F IN+ +GH++G Sbjct: 886 RKQREMIRIAKQDQLTKLYNRHTLTTDLYKKMHRTPSITLILVNLDDFTRINNQYGHMIG 945 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTG--GTLEELLSILKEIVHFQVGS-I 400 DEVL+++ + L + G+VYRF DEF ++ TG +E++ ++ + +H G I Sbjct: 946 DEVLIEIAQRLNEFVQRVGGQVYRFSDDEFVLVQTGPLSGVEQINEVISQGIHASNGEVI 1005 Query: 401 NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 +L+ S+GV TV+ + AD +Y +K NG Q Sbjct: 1006 HLTASVGVTLVQSTDTVDSILQQADAAMYIAKNNGGDQ 1043 >UniRef50_A3WKY3 Putative uncharacterized protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WKY3_9GAMM Length = 363 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 13/161 (8%) Query: 283 ADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLL 342 A KL +YN +LD + S ++ + LP + L DVD FK IND GHL Sbjct: 194 AKTDKLTQLYNRQYLD-----VTLFSLYKERRTLPIS---VLLLDVDLFKRINDEHGHLF 245 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI---VHFQVG- 398 GDEVL+K+ + L +++ D V R+GG+EF +I + + L + + + ++ + Sbjct: 246 GDEVLVKMAQRL-TEVVRDDDVVGRWGGEEFLIIAPNTSKSDALGLAERVRRSLNMSITE 304 Query: 399 SINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 S+ S SIGV+ ++ + E L AD LY++K NGR Q+ Sbjct: 305 SVTTSVSIGVSSADRVKSPEELISQADRALYQAKSNGRNQV 345 >UniRef50_B7GHW2 Multidomain signal transduction protein (GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GHW2_ANOFW Length = 765 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 70/242 (28%), Positives = 126/242 (52%), Gaps = 27/242 (11%) Query: 222 KDVYLRVCTLIIFFAALV---------AVISGASCLYLVRRVI---NRGIVEKEAIINNH 269 K ++ VC L++ F + ++ C++L + ++ NR ++++ +N++ Sbjct: 253 KIMFPYVCFLLLLFVPFIYPDDRIVITCLVFAVGCIFLRQWMMLKENRQLLQQLQTLNDN 312 Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDL--TKAMGRKSFDEDLKALPEKGGYLCLF- 326 ER + ++L + N FL L +A K +E ++A ++ + +F Sbjct: 313 LERKVAQRTSELVHLNEQLTYVANHDFLTGLFNRRAFVMKLEEELIRAKQQQHHFAVIFI 372 Query: 327 DVDKFKNINDTFGHLLGDEVLMKVVKILKSQI-PVDKGKVYRFGGDEFAVIYTG-GTLEE 384 DVD+FK IND FGH +GDE+++++ ++LK I P D + R GGDEF +I+T ++E Sbjct: 373 DVDRFKQINDYFGHQIGDELIVQIGRLLKETIRPTD--FIARQGGDEFTIIFTPFKHVDE 430 Query: 385 LLSILKEIVHF-------QVGSINLSTSIGVA-HSNECPTVERLKMLADERLYKSKKNGR 436 L + +V F Q I +S S+GVA + + TVE L AD +Y++K+ G+ Sbjct: 431 LRRFVHRLVSFSQQPVAVQHLDIRISLSVGVAVYPYDGETVETLMKHADIAMYRAKEQGK 490 Query: 437 AQ 438 Q Sbjct: 491 NQ 492 >UniRef50_C0Z7T1 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7T1_BREBN Length = 404 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 14/169 (8%) Query: 281 SAADVKKLYS-MYNSAFLDDLTKAMGRKSFDEDL-KALPEKGGY--LCLFDVDKFKNIND 336 SA + +LY MY +F D+LT ++F DL K L E+ L + D D K +ND Sbjct: 228 SAIETARLYERMYQMSFQDELTGIANYRAFHRDLEKLLSEENASVSLIMLDSDSLKAVND 287 Query: 337 TFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL---EELLSILKEIV 393 FGH GD ++ ++ + +K ++ + YR+ GDEF ++ G ++ EE S ++E + Sbjct: 288 HFGHHAGDALIKQIAEAMK-EVAGPEDTAYRYAGDEFMLLCPGASMEMAEEKASAIREYL 346 Query: 394 HFQVGS-----INLSTSIGVA-HSNECPTVERLKMLADERLYKSKKNGR 436 + + I ++ S+G+A + + T + LK ADE LY+SK+ G+ Sbjct: 347 RLRPLTQDDCCILIAVSVGIARYPQDANTADGLKRAADEALYRSKRKGK 395 >UniRef50_A6GF95 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GF95_9DELT Length = 306 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 17/162 (10%) Query: 295 AFLDDLTKAMGRKSFDEDLK---ALPEKGGY---LCLFDVDKFKNINDTFGHLLGDEVLM 348 A +D+LT R+ +DE + AL + G L L D+D FK++ND+ GH +GDEVL Sbjct: 146 AHVDELTGLPNRRRYDERMHSELALARRSGRPVTLLLVDIDHFKDVNDSLGHQVGDEVLG 205 Query: 349 KVVKILKSQIPVDKGK-VYRFGGDEFAVIYTGGTLEELLSILKEIVH--FQVGSINLST- 404 + ++L + +G +RFGG+EFA+I T ++ S+L E + F+ S + Sbjct: 206 FMGELLDAS--TRRGDWPFRFGGEEFAIIARNTTAKQ-ASVLGERIRGAFEARSGETAAG 262 Query: 405 ----SIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISWQ 442 S+G+A T E L AD RLY +K+ GR ++ W+ Sbjct: 263 LRTCSVGIASFEPADTPEALFARADARLYAAKQAGRNRVVWE 304 >UniRef50_Q2BLA2 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLA2_9GAMM Length = 811 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 18/168 (10%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKA-LPEKGGY-----LCLFDVDKFKNINDTFGHLLG 343 +++ A D+LT R+ F L+A L Y LC+ D+D FK IND GH G Sbjct: 636 NLHRLATTDELTSLANRRKFLTTLEAELARAKRYHRELSLCMLDLDHFKRINDDNGHSAG 695 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHF 395 D VL++V KI+++ + + R GG+EFA++ + ++ L + + + + + Sbjct: 696 DSVLVEVAKIMEAML-RESDMAGRIGGEEFAILLPDTSEDDALILAERLREAIESLEIKY 754 Query: 396 QVGSINLSTSIGVAHSNECPTVERLKML---ADERLYKSKKNGRAQIS 440 Q ++ L+TSIGVA N+ P + + L AD+ +Y +K+NGR +S Sbjct: 755 QAHTLKLTTSIGVASLNQMPEIVQASELLSAADDCMYYAKQNGRNLVS 802 >UniRef50_B6BIZ0 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BIZ0_9PROT Length = 311 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 17/175 (9%) Query: 278 LFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKF 331 +F + + K+LY + + D LTK RK FDE L + E + LFD+D F Sbjct: 140 IFTAKKEAKELYEI---STKDHLTKIYNRKKFDELLSFEIKNSKINETSLAIILFDIDHF 196 Query: 332 KNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIY------TGGTLEEL 385 K++ND GH +GD +L+ + ++K+QI D R+GG+EF ++ + E+ Sbjct: 197 KHVNDNHGHDVGDRILVSLSNLIKTQIR-DSDIFARWGGEEFIILMPKSNKVSSSARAEM 255 Query: 386 LSILKEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 L E F+V + N++ S GV H + E L D+ LYK+K +GR IS Sbjct: 256 FRQLIESHSFEVVN-NITCSFGVTHYEDEDDEESLFSRVDKALYKAKDSGRNTIS 309 >UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TG17_HELMI Length = 324 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 17/163 (10%) Query: 291 MYNSAFLDDLTKAMGRKSFDE----DLKALPEKGG--YLCLFDVDKFKNINDTFGHLLGD 344 + N + LD LT R+ FDE + K G L LFD+D FK NDT+GH+ GD Sbjct: 149 LQNLSSLDGLTGLANRRRFDEYLASEWKRAIRNGTPISLILFDIDWFKPYNDTYGHIQGD 208 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV---------HF 395 + L + ++ + V R+GG+EFAVI + E L++ + I H Sbjct: 209 DCLKAIASLMPKVVRRSSDLVCRYGGEEFAVILPDTSQEGALAVAESIREALSEAGIEHR 268 Query: 396 QVGSINLSTSIGVAHSNECPTVERLKML--ADERLYKSKKNGR 436 Q ++ S+GVA + P+ E + ++ ADE LY++K+ GR Sbjct: 269 QSPLDRVTVSVGVATAYPSPSSEPVTLIGYADEALYEAKRQGR 311 >UniRef50_C6P3N4 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3N4_9PROT Length = 387 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 19/161 (11%) Query: 295 AFLDDLTKAMGRKSF-DEDLKALPEKGGY---LCLFDVDKFKNINDTFGHLLGDEVLMKV 350 A D LT R++ D +A+ ++GG L + D D FK INDT+GH +GDEVL ++ Sbjct: 226 AMTDSLTGVPNRRALMDYAERAMAQRGGRSVALLMIDADHFKRINDTYGHPVGDEVLRQL 285 Query: 351 VKILKSQIPVDKGK--VYRFGGDEFAVIYTGGTLEELL--------SILKEIVHFQVGSI 400 ++L+ ++ +G + R+GG+EF V+ E L S+ ++ + G + Sbjct: 286 TRLLQQRL---RGGDLLGRYGGEEFCVVAPDADAEGALKLAESLRESVASAVLDTEQGKL 342 Query: 401 NLSTSIGVAHS--NECPTVERLKMLADERLYKSKKNGRAQI 439 +++ SIG+AHS + ++ + AD LY +KK GR Q+ Sbjct: 343 SITVSIGIAHSTADAGRALKDILAEADIALYSAKKGGRNQV 383 >UniRef50_Q5E0A0 GGDEF domain protein n=2 Tax=Vibrio fischeri RepID=Q5E0A0_VIBF1 Length = 430 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 10/150 (6%) Query: 291 MYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKV 350 MY +++D LT R++FD+D K K L D++ FK IND +GH +GD++L++V Sbjct: 274 MYELSYIDSLTGLYNRRAFDKDAKKCF-KSSILFFCDLNGFKKINDIYGHEVGDQLLIEV 332 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGT-------LEELLSILKEIVHFQVGSINLS 403 K ++S I KG +YR GGDEF+++ + EL I+ E + IN+S Sbjct: 333 SKRMRSFID-SKGTIYRLGGDEFSILLNKNDNVDVHVFINELFEIISESLLISDVVINIS 391 Query: 404 TSIGVA-HSNECPTVERLKMLADERLYKSK 432 S G + + + +E L +AD+R+Y++K Sbjct: 392 ISTGYSVYPVDGLILEDLIRIADKRMYQAK 421 >UniRef50_Q7CYR0 GGDEF family protein n=4 Tax=Rhizobium/Agrobacterium group RepID=Q7CYR0_AGRT5 Length = 356 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 19/159 (11%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEKG-----GYLCLFDVDKFKNINDTFGHLLGDEVLMK 349 A D LT+ R++FD+ L ++ + L L D+D FK INDTFGH +GD++L Sbjct: 176 ANTDSLTRLSNRRAFDDRLASVYDSSIGLQYTTLVLLDIDHFKRINDTFGHPVGDKILAT 235 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI--------- 400 V ++++ + D G V R GG+EFA+I G T EE++ ++ E + + S Sbjct: 236 VASVIRANVRKD-GFVARSGGEEFAIILDGNTPEEVM-VMCERIRLSLESTPFRNSRSGA 293 Query: 401 ---NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 ++ SIG A + L AD LY +K+ GR Sbjct: 294 DYGTVTISIGFASAARASNPSELYGHADTALYHAKETGR 332 >UniRef50_A5UW82 Diguanylate cyclase n=2 Tax=Roseiflexus RepID=A5UW82_ROSS1 Length = 387 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 20/174 (11%) Query: 283 ADVKKLYSMY----NSAFLDDLTKAMGRKSFDED---LKALPEKGGY---LCLFDVDKFK 332 + +++L++ Y N A+ D LT R+ ED L AL E+ G +CLFD+D FK Sbjct: 205 SHIERLHTEYEVMANLAYTDTLTSLPNRRRLYEDVYRLIALAERYGQEFCVCLFDLDHFK 264 Query: 333 NINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY-RFGGDEFAVIYTGGTLEELLSILKE 391 +NDT GHL+GD+VL +V ++ +++ + ++ R+GG+EF V+ L + + L E Sbjct: 265 RLNDTHGHLVGDQVLQEVAQV--ARLHLRAADLFGRWGGEEFVVLLPQTRLNDAQTAL-E 321 Query: 392 IVHFQVGSINL------STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 V + +I L + S G+A T E L AD+ LY +K GR +I Sbjct: 322 RVRLALHTIALPNVHAITASFGIAAYLPGDTSESLLHRADQALYLAKATGRNRI 375 >UniRef50_B0TH60 Ggdef domain protein, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH60_HELMI Length = 414 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 12/158 (7%) Query: 293 NSAFLDDLTKAMGRKSFDEDLKAL-PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 A D LT + F + L+ L E+ L LFD+D FK NDT+GH GDE+L ++ Sbjct: 245 RQAVTDGLTGLYNHRYFQQCLQELMKERPVTLLLFDIDHFKGFNDTYGHPCGDEILRQIA 304 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTL----EELLSILKEIVHF------QVGSIN 401 IL+SQ+ + R+GG+EFAVI L E I + + +F + +N Sbjct: 305 HILRSQLGPQE-VAARYGGEEFAVILPDADLRRGIERAEQIRQAVANFCFRNPDRTLCLN 363 Query: 402 LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ SIGV+ RL AD LY++K+ GR ++ Sbjct: 364 ITVSIGVSEKLAGWDKSRLIEAADRALYRAKEQGRNRV 401 >UniRef50_A9BI72 Diguanylate cyclase n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BI72_PETMO Length = 499 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 13/152 (8%) Query: 295 AFLDDLTKAMGRKSFDE---DLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 A +D LT+ R+S++ +K L + L + D+D FK +NDT+GH GD +L K Sbjct: 351 AQIDSLTEIGNRRSYENYISSIKYLKNQKIALVVLDLDNFKKVNDTYGHEEGDSLLKKF- 409 Query: 352 KILKSQIPVD----KGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIG 407 +Q+ VD K ++R+GGDEF +I G EE+ SIL+ I N++ S G Sbjct: 410 ----AQLCVDNLRKKDNIFRYGGDEFVIILGGVKKEEVYSILERINSKLKQETNVTFSAG 465 Query: 408 VAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 VA+ E ++ L +ADE LY +K G+ I Sbjct: 466 VAYG-ESHEIDSLFNIADENLYIAKGQGKNNI 496 >UniRef50_D2R798 Diguanylate cyclase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R798_9PLAN Length = 500 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 23/172 (13%) Query: 283 ADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK-ALPEKG-----GYLCLFDVDKFKNIND 336 A +++ S A D LT+ R++FD++L+ L E+ L + DVD FK ND Sbjct: 109 AQARQIESHAVEARTDALTQVANRRAFDDELRRCLSERDHNKTVSTLMILDVDHFKKFND 168 Query: 337 TFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTG--------GTLEELLSI 388 T GH GDEVL V ++L++ + V R+GG+EFA+++ G + ++ Sbjct: 169 THGHQAGDEVLRGVARVLRNAFSSAE-LVARYGGEEFAIVFPGVSFAACQISAEKARQAV 227 Query: 389 LKEIVHFQVGSINLSTSIGVAH----SNECPTVERLKMLADERLYKSKKNGR 436 FQ S++++ S G++ NE + R ADE LY SKK GR Sbjct: 228 ATANFRFQGKSLSVTASAGLSELLPTDNEQEWIRR----ADEALYASKKAGR 275 >UniRef50_A3WMF3 PAS:GGDEF protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WMF3_9GAMM Length = 769 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 10/160 (6%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKALPEKGG----YLCLFDVDKFKNINDTFGHLLGDE 345 S+ +A+ D+LT R+ D+++K+L + +C D+D FK IND +GH +GD+ Sbjct: 346 SLQYAAYHDELTGLPNRRKLDQEIKSLTHRQQPSQFSVCYIDLDSFKPINDNYGHEVGDK 405 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT----LEELLSILKEIVHFQVGSIN 401 +L V K +K I + V R GDEF ++ +++ L + IN Sbjct: 406 ILKLVAKRIKHLIGT-QDSVARISGDEFVIVLNAPANDTDYQKITDTLAQPYAIDDIMIN 464 Query: 402 LSTSIGVA-HSNECPTVERLKMLADERLYKSKKNGRAQIS 440 LS S+GVA + N+ ++L AD+ +Y++K G+ Q+S Sbjct: 465 LSASMGVAVYPNDTQHADQLIRFADQSMYQAKSEGKNQVS 504 >UniRef50_A1S668 GGDEF domain-like protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S668_SHEAM Length = 356 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 84/177 (47%), Gaps = 15/177 (8%) Query: 277 GLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL-PEKGGYLCLFDVDKFKNIN 335 G F+ K+ S+ A D LT R + DL AL P L L DVD FK IN Sbjct: 146 GAVFAFILAKQHDSLVQIAQRDPLTGLFNRSKLELDLAALAPATQAILMLLDVDHFKRIN 205 Query: 336 DTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT----GGTLEELLSILKE 391 D GH +GD+VL + K+L + +P D YRFGG+EF V++ E L++ K Sbjct: 206 DVHGHQMGDKVLTSLGKLLDALLP-DVATAYRFGGEEFLVLFNLTEPSAFNETALNLAKT 264 Query: 392 IV-HFQ--------VGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 FQ V ++ SIG+A + AD LY++K++GR Q+ Sbjct: 265 TAGRFQAALRCVDVVPGSTITCSIGIAQRIAGEHIPPWFDRADAALYRAKRSGRDQV 321 >UniRef50_Q5FJ86 Regulator components n=2 Tax=Lactobacillus acidophilus RepID=Q5FJ86_LACAC Length = 367 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 34/197 (17%) Query: 273 VLDGGLFFSAADVKKLY----------SMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY 322 +L G F A+ ++Y ++ + DDLT + ++FDE+++ L + Sbjct: 172 ILAGTFFIIIAENSRMYYEQKQKEEIEKLHYESVRDDLTGLLNYRAFDEEMQGLSKDESN 231 Query: 323 LCLF----DVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVD---KGKVYRFGGDEFAV 375 + +F D+D FK +NDT+GHL G+ VL K LK I + VYRFGG+EF + Sbjct: 232 MPIFIAVLDIDHFKQVNDTYGHLNGNTVLSTFSKKLKLDIHHNFDPHCAVYRFGGEEFTI 291 Query: 376 IYTGGTLEELLSILKEIVHF---------QVGSINLSTSIGVA--HSNE--CPTVERLKM 422 + +++ IL I + + I S S G+ H+NE T+ER Sbjct: 292 LIKTKDNTKIIKILNSINKYYSKHPVITDEGQKIFFSFSGGLTEHHNNEKFTKTLER--- 348 Query: 423 LADERLYKSKKNGRAQI 439 ADE +Y++KK GRA+I Sbjct: 349 -ADELVYQAKKTGRAKI 364 >UniRef50_C8WI27 Diguanylate cyclase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WI27_EGGLE Length = 519 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 74/234 (31%), Positives = 111/234 (47%), Gaps = 25/234 (10%) Query: 223 DVYLRV-CTLIIFFAALVAVISGASCLYLVRR-----VINRGIVEKEAIINNHFERVLDG 276 D Y +V L AA +A+++G L+RR + N ++EK + +V D Sbjct: 279 DAYTKVMAALAPLIAAGLAIVAG--VFLLLRRDFMCQMENARMLEKS--VEELQRKVYDD 334 Query: 277 GLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK---GG---YLCLFDVDK 330 G + AD+ + + +S D LT + R F L + E GG LC D+D Sbjct: 335 GRS-AEADIADILELTSSGLSDGLTGTVTRSVFSSKLASALENARDGGSLYALCFIDLDD 393 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE-ELLSIL 389 FK INDT+GH GD L + L+ G V R+GGDEF ++ T E EL ++L Sbjct: 394 FKTINDTYGHATGDAALKSIGYALRGYERRYDGMVGRYGGDEFVMLMTDIDDEGELRAVL 453 Query: 390 KEI-----VHFQVGS--INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 E+ V QVG +++ SIG A + + L AD LY+ K++G+ Sbjct: 454 DEMVGDLHVDIQVGDAVVSVHCSIGAAVWDRVSDADALLGQADNALYRVKQHGK 507 >UniRef50_B2VGK6 Putative uncharacterized protein n=1 Tax=Erwinia tasmaniensis RepID=B2VGK6_ERWT9 Length = 522 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 89/167 (53%), Gaps = 16/167 (9%) Query: 285 VKKLYS-MYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY----LCLFDVDKFKNINDTFG 339 + K +S + + A D LTK R+ FD+ L A P GG L L D+D FK +ND FG Sbjct: 350 INKTFSILRDDALTDHLTKLHNRRGFDQ-LTA-PFVGGQGSHSLALIDIDHFKQVNDQFG 407 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------V 393 H GDEVL+ V +LK + + RFGG+EFA+++ TL E ++ I V Sbjct: 408 HDTGDEVLVAVSGLLKKGCRT-QDIICRFGGEEFAILFPDTTLTEAGRVVNRIRENIANV 466 Query: 394 HFQVGSINLSTSIGVAH-SNECPTVERLKMLADERLYKSKKNGRAQI 439 F I+++ S GV + + E+ +AD+ LY++K GR ++ Sbjct: 467 QFP-AVIHITISAGVCELAQDGDDREKALAVADQLLYRAKHEGRNRV 512 >UniRef50_C7R8C5 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8C5_KANKD Length = 698 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 22/164 (13%) Query: 298 DDLTKAMGRKSFDEDLK---------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLM 348 D+LT+ R+ F+++ K A P L + D+D FKN+ND +GH GD+ ++ Sbjct: 536 DELTQIYNRRGFNQNAKNAFAVSIRHATPVT---LAILDIDHFKNVNDQWGHSAGDQCII 592 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG-------TLEEL-LSILKEIVHFQVGSI 400 V + +K + D V R+GG+EF V GG LEEL +I V+++ I Sbjct: 593 MVAEEMKKRFKRDSDFVARYGGEEFVVFIAGGDVDVHKRMLEELRTNIANHEVYYEDTII 652 Query: 401 NLSTSIGVAHSNECPTVERLKML--ADERLYKSKKNGRAQISWQ 442 +++ SIG E + K++ AD+ LY+SK+NGR Q++ + Sbjct: 653 SITVSIGAYSIVEDLNISYDKLVSNADKLLYQSKENGRNQLTME 696 >UniRef50_A6VRQ9 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VRQ9_MARMS Length = 356 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 99/167 (59%), Gaps = 14/167 (8%) Query: 285 VKKLYSMYNSAFLDDLTKAMGR----KSFDE-DLKALPEKGGY-LCLFDVDKFKNINDTF 338 +++ ++ N A++D LT+ + R K F+E +L + +K Y + + D+D FK +ND Sbjct: 187 IERADTLENYAYVDLLTRVLNRRGIEKVFNELNLDSTEQKKNYAILIIDIDHFKQVNDIH 246 Query: 339 GHLLGDEVLMKVV-KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE----IV 393 GHL GD+VL + K+ ++ P D + R+GG+EF V+ T ++++++ + + Sbjct: 247 GHLTGDKVLSSIAGKLSRTVHPND--VLGRWGGEEFIVLTLNRTPKQVMALAENLRTAVS 304 Query: 394 HFQVGSI-NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + +G+I N++ SIG+ +S E + E + +AD LY +K++GR I Sbjct: 305 NLIIGNISNITVSIGIGYSYEASSKEAVFKIADSHLYIAKQSGRNTI 351 >UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5V1I0_ROSS1 Length = 681 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 18/164 (10%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNINDTFGHLLGDEVLM 348 A +D+LT R++F E+++ ++ + + DVD FK++NDT+GH GD+VL Sbjct: 509 ATIDELTGVWNRRTFFENVRREFQRSQRTLHPLAILMIDVDHFKSVNDTYGHAAGDQVLR 568 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAV------IYTGGTLEELLSILKEIVHF--QVGSI 400 V + ++Q+ V + R+GG+EFAV I+ G + E L I E F GSI Sbjct: 569 GVAERCRNQLRV-IDIIGRYGGEEFAVALPETDIHAAGQIAERLRIAVERAPFVTDYGSI 627 Query: 401 NLSTSIGVA--HSNECPTVERLKMLADERLYKSKKNGRAQIS-W 441 +L+ S+G A H ++ T++ + AD LY +K++GR + W Sbjct: 628 SLTISVGAAVYHPDDHVTLDAVIDRADRALYIAKRSGRNSVRVW 671 >UniRef50_B0KCF6 Diguanylate cyclase with GAF sensor n=12 Tax=Thermoanaerobacterales RepID=B0KCF6_THEP3 Length = 554 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 89/174 (51%), Gaps = 17/174 (9%) Query: 283 ADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVDKFKNIND 336 + K+ Y + + D LTK R+ F++ L + L +FD+D FK IND Sbjct: 378 TNAKRYYEVTKKSITDPLTKTYNRRYFNDALMENIMRADETSEPVSLIMFDLDNFKLIND 437 Query: 337 TFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI---- 392 T+GHL+GDEVL +V K +K+ + D V RFGG+EFAVI T E+ I + I Sbjct: 438 TYGHLVGDEVLKEVAKRIKNNVRSDD-IVARFGGEEFAVILPKLTAEQAYMIAERIRNEV 496 Query: 393 ----VHFQVGSINLSTSIGVA-HSNECPTVERLKMLADERLYK-SKKNGRAQIS 440 + G I ++ + GVA + + + E+L AD LY K GR +I+ Sbjct: 497 SSRPIRTDKGDIYVTITGGVADYPEKADSAEKLISHADRALYAGGKSKGRNKIA 550 >UniRef50_B8GLI2 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLI2_THISH Length = 335 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 88/161 (54%), Gaps = 21/161 (13%) Query: 298 DDLTKAMGRKSFDEDLKAL----PEKGGYLC--LFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LT R++ ++ L+A+ +GG +C L DVD FK INDT+GH +GDEVL + Sbjct: 175 DPLTGLPNRRALNKRLEAVLLETQGRGGGMCVGLLDVDHFKQINDTYGHDVGDEVLTTLS 234 Query: 352 KILKSQI-PVDKGKVYRFGGDEFAVIY--------TGGTLEELL-SILKEIVHFQVGSIN 401 K L+ + P+D V R GG+EFA++ G + +L ++ K+ G I Sbjct: 235 KRLRLALRPMD--MVARLGGEEFALVMHFHDVDNCNPGIFQRVLDTVSKDPFPTSEGQIP 292 Query: 402 LSTSIGVA---HSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ SIG H + T++ + +ADE LY++K GR ++ Sbjct: 293 VTASIGACCYRHGEQMVTIQGMLKIADENLYRAKAEGRNRV 333 >UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium RepID=B2V5Y5_SULSY Length = 411 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 15/157 (9%) Query: 297 LDDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNINDTFGHLLGDEVLMKV 350 +D LT A R+ F+ ++ L E L + D+D FK INDTFGHL GDE L Sbjct: 254 IDPLTGAFNRRGFEIIIQKLLEISQITDAPITLAMADLDYFKKINDTFGHLAGDEALKHF 313 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINL 402 V I+K + V+R GG+EF ++ L++ + I++ I +H+ I + Sbjct: 314 VNIIKRNLR-KSDYVFRIGGEEFLILLPNTELKDAVEIVERIRKDLEENSLHYDGKEIKI 372 Query: 403 STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + S G+A ++ + + ADE+LYK+K++GR ++ Sbjct: 373 TASFGLAEVDKEKYINEIIKKADEKLYKAKESGRNKV 409 >UniRef50_B0C7A4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7A4_ACAM1 Length = 587 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 8/176 (4%) Query: 272 RVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKF 331 + LD +VK ++ A D LT + R +E LP D+D+F Sbjct: 141 KALDSARQVRMNEVKLRTTLTYQARYDGLTGLLNRVGIEEQFSELPPGPLAAMFVDLDRF 200 Query: 332 KNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSI--- 388 K +ND GH +GDE+L +V + ++ I + R GGDEF ++ G L +LL+I Sbjct: 201 KEVNDRLGHTMGDELLEQVGQRVQDVIQHRSHLLARLGGDEFFLVLPGCPLRDLLAISDT 260 Query: 389 ----LKEIVHFQVGSINLSTSIGVA-HSNECPTVERLKMLADERLYKSKKNGRAQI 439 L++ G +S SIG A S + +E+L AD+ +Y++K+ GR ++ Sbjct: 261 ILNTLEQPFTLTSGQAYISASIGTATTSGDIANLEQLIRDADQAMYRAKEAGRRRV 316 >UniRef50_A0L914 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L914_MAGSM Length = 1264 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 84/161 (52%), Gaps = 16/161 (9%) Query: 291 MYNSAFLDDLTKAMGRKSFDEDL-KALPE---KGGYLCLF--DVDKFKNINDTFGHLLGD 344 ++ A D LT R+ F + L +AL + G + LF D+D+FK INDT GH GD Sbjct: 811 IWRQANFDPLTSLPNRRLFQDRLHQALAQADRSAGRVALFFLDLDRFKPINDTMGHQAGD 870 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAV----IYTGGTL----EELLSILKEIVHFQ 396 E+L K + + + + V R GGDEF V I G L E ++ L E + + Sbjct: 871 ELLQKCAERINAAV-RSSDTVARLGGDEFTVILPNIQNGQDLSRIAEGIIKTLTEPFYLK 929 Query: 397 VGSINLSTSIGVA-HSNECPTVERLKMLADERLYKSKKNGR 436 G N+STS+GVA + ++ E L AD LY++K +GR Sbjct: 930 AGEANISTSVGVAVYPDDSQDDEGLMRAADAALYQAKDHGR 970 >UniRef50_Q21FP0 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FP0_SACD2 Length = 498 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 80/148 (54%), Gaps = 8/148 (5%) Query: 302 KAMGRKSFDEDLKALPEKGGYLC-LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV 360 +AM + DE KA +C + D+D FK +NDT+GH +GD V+ V +++K + Sbjct: 342 RAMRERLDDEFAKAQNSGKDLVCIMLDIDHFKRVNDTYGHGVGDVVIKMVAQVVKEAVR- 400 Query: 361 DKGKVYRFGGDEFAVIYTGGTLEELLSILKE----IVHFQVGSINLSTSIGVAH-SNECP 415 D V RFGG+EF V+ T+E++ I K I G + +++S G+A S Sbjct: 401 DSDIVARFGGEEFCVVLPNATVEQVKIIAKRCRMTIETQNCGGVKVTSSFGIAALSLGAK 460 Query: 416 TVERLKMLADERLYKSKKNGRAQIS-WQ 442 + L ADE LY SK+NGR +S WQ Sbjct: 461 SPNDLIHQADEALYNSKQNGRNMVSVWQ 488 >UniRef50_Q1K364 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K364_DESAC Length = 284 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 25/181 (13%) Query: 281 SAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNI 334 +A DV +L + LD L R+ D L++ +K + L DVD FK + Sbjct: 93 TADDVTRLCHLEYENILDPLLGIYNRRHMDRCLRSEADKTRRYALDLSVLLIDVDFFKKV 152 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVI--YTGGTLEELL------ 386 NDT+GHL+GD VL+ + +++K + D V+R+GG+E V+ YT + + L Sbjct: 153 NDTYGHLVGDRVLLALAQMIKGSVR-DFDMVFRYGGEEIMVLLPYTNSSGAQTLGSRLCQ 211 Query: 387 -----SILKEIVHFQVGSINLSTSIGVAHSNECPTVE---RLKMLADERLYKSKKNGRAQ 438 S+L+E+ Q ++ ++ SIGV+ + P VE + AD LY++KKNGR + Sbjct: 212 WVSERSLLEEVHQGQPVNVQVTISIGVSTFD--PAVEDEGEMVARADMALYRAKKNGRNR 269 Query: 439 I 439 + Sbjct: 270 V 270 >UniRef50_Q4UZ02 GGDEF family protein n=10 Tax=Xanthomonas RepID=Q4UZ02_XANC8 Length = 326 Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 18/162 (11%) Query: 290 SMYNSAFLDDLTKAMGRKSFDE--------DLKALPEKGGYLCLFDVDKFKNINDTFGHL 341 S+ + A D LT RK+FD+ + E +L + D+D FK +NDTFGHL Sbjct: 140 SLLDDAQRDALTGLRNRKTFDDMILRLFAANADGAQENAVWLGIVDIDHFKRVNDTFGHL 199 Query: 342 LGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK-------EIVH 394 GDEVL+ V ++++ D ++RFGG+EF ++ G + +S+ + E Sbjct: 200 YGDEVLLLVAQLMQRCFRQDD-LLFRFGGEEFVIVLRGVDRDTAVSLFERFRRAVAEHSF 258 Query: 395 FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 QVG++ LST G+ ++ V ++ AD+ LY +K++GR Sbjct: 259 PQVGTVTLST--GIVELSDGRLVSQMLDEADKALYWAKQHGR 298 >UniRef50_Q31GI5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GI5_THICR Length = 532 Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 17/176 (9%) Query: 278 LFFSAADVKKLYSMYNSAFLDDLT----KAMGRKSFDEDLKALPEKGGYLCL--FDVDKF 331 FF +++ ++ A D+LT +++ +++ +E++K +K L L FD+D F Sbjct: 355 FFFIRNQIRQRRLLHKMAKTDNLTGLPNRSIFKRALNENIKRSNKKQWPLSLIFFDIDHF 414 Query: 332 KNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL-------EE 384 K INDT+GHL+GD+VL KV + ++ + K R+GG+EF ++ L E Sbjct: 415 KKINDTYGHLVGDKVLKKVARNIEDGL-THKDIFARWGGEEFVILLPNTDLQDAEKVAER 473 Query: 385 LLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 L L+ + F I +++S GV+ T E DE LY+SK+ GR +++ Sbjct: 474 LRQKLEAMTDF---DITITSSFGVSDLRPDDTAESFMQRGDEMLYRSKEQGRNRVT 526 >UniRef50_C4DER9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DER9_9ACTO Length = 841 Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 93/194 (47%), Gaps = 17/194 (8%) Query: 261 EKEAIINNHFERVLDGGLFFSAADVKKLYSMYNS----AFLDDLTKAMGRKSFDEDLKAL 316 + E+I+ + + GL DV + ++ AF D LT R++ L++ Sbjct: 373 DTESIVADQRDNPKVDGLVIRTRDVGERRALERELAKLAFTDPLTTLSNRRALLRTLESD 432 Query: 317 PEKGGYLCLF---DVDKFKNINDTFGHLLGDEVLMKVVKILKSQI-PVDKGKVYRFGGDE 372 G C D+D FKN+NDT GH +GD VL++V K L+ + P D R GGDE Sbjct: 433 VAGGSMPCTLLAVDLDGFKNVNDTRGHDIGDAVLVEVAKRLRESLRPTDVAA--RLGGDE 490 Query: 373 FAVIYTGGT------LEELLSILKEIVHFQV-GSINLSTSIGVAHSNECPTVERLKMLAD 425 FAV+ E LL++L E F S+ LS+SIG+A V+ L AD Sbjct: 491 FAVLLWCPPERGYEIAERLLAVLAEPYRFDGHASVFLSSSIGLAGCATADDVQALLRNAD 550 Query: 426 ERLYKSKKNGRAQI 439 L +K+ G+ QI Sbjct: 551 LALRSAKQQGKNQI 564 >UniRef50_Q4KAN5 GGDEF domain protein n=4 Tax=Pseudomonas RepID=Q4KAN5_PSEF5 Length = 366 Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 12/155 (7%) Query: 291 MYNSAFLDDLTKAMGRKSF----DEDLKALP-EKGGYLCLFDVDKFKNINDTFGHLLGDE 345 + + A+LD LT+ R+SF + L+ALP E YL + D+D FK +ND +GH +GDE Sbjct: 200 LLDQAYLDTLTEIPNRRSFMARAGQRLQALPREHDHYLAMVDIDNFKKVNDVYGHDIGDE 259 Query: 346 VLMKVVKILKSQIPVDKGKVY-RFGGDEFAVIYTG---GTLEELLSILKEIVHFQVGSIN 401 VL ++ +K V + Y R GG+EFA+ +E L + L ++V Q Sbjct: 260 VLKRIAADIKG---VMRDFDYARLGGEEFAIYLADVPRADVEALATRLCQVVRDQPTRHP 316 Query: 402 LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 ++ S+G+A T+ + + AD+ LY+SK G+ Sbjct: 317 VTISMGLARVEPGETLNQALIKADQALYESKHGGK 351 >UniRef50_A8VS95 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VS95_9BACI Length = 615 Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 19/159 (11%) Query: 297 LDDLTKAMGRKSFDEDL-----KALPEKGGY-LCLFDVDKFKNINDTFGHLLGDEVLMKV 350 LD LT R+ FDEDL + + E G L + D+D +KN ND +GHL GD+ L +V Sbjct: 449 LDGLTGLPNRRMFDEDLITVVKETMDENGKLGLVMLDIDNYKNYNDFYGHLQGDDCLKEV 508 Query: 351 VKILKSQI-PVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE---------IVHFQVGSI 400 + K I D +VYR+GG+EFAV+ + E ++ ++ I H Q Sbjct: 509 ATLFKQVIKEEDSAEVYRYGGEEFAVLVKEASEAETYALAEQIRKRVEEAAIPHEQSDVQ 568 Query: 401 N-LSTSIGVA--HSNECPTVERLKMLADERLYKSKKNGR 436 N L+ S GVA + + + E+L AD LY++K++G+ Sbjct: 569 NRLTVSAGVAVLQARDLHSPEKLLEQADAALYQAKRSGK 607 >UniRef50_C6XCT4 7TM domain sensor diguanylate cyclase n=2 Tax=Betaproteobacteria RepID=C6XCT4_METSD Length = 551 Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 6/143 (4%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKIL 354 A+ D LT R + D++L+ LP+ G L D+D K ND FGH GDE+L + Sbjct: 404 AYTDALTGLPNRYALDKELEHLPQSG-LLVFVDMDGLKFYNDNFGHKRGDELLCAFASAM 462 Query: 355 KSQIPVDKGKVYRFGGDEFAVIYTGG---TLEELLSILKEIVHFQVGSINLSTSIGVAHS 411 +S++ + G ++R GGDEFA+ + G ++E L + VH Q G S G+A Sbjct: 463 RSEL-MKYGALHRIGGDEFAITFPSGDLTSIETKLHAAMQTVHAQ-GFDFSGISYGIAMV 520 Query: 412 NECPTVERLKMLADERLYKSKKN 434 +E LK LAD R+Y+ K+ Sbjct: 521 SESADRNVLKHLADTRMYEHKRQ 543 >UniRef50_B5ABD9 Response regulator n=1 Tax=Enterobacter sp. FMB-1 RepID=B5ABD9_9ENTR Length = 294 Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 17/154 (11%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKV-VKI 353 AF D+LT R+ + LK + K +C+ D+D FKNINDT+GH +GD+VL V +K+ Sbjct: 146 AFTDELTGLPNRRHLNFKLKEIENKRCTICIADIDYFKNINDTWGHEMGDKVLASVGLKL 205 Query: 354 LKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQV----GSINLSTSIGVA 409 + + + + R GG+EF +I T T + + ++ I F G +N++ S+G A Sbjct: 206 M--NLSSNNLFIARSGGEEFCIIITEAT--DAAAQIRNICAFLEGGCNGGVNITLSVGAA 261 Query: 410 --HSNECPT--VERLKMLADERLYKSKKNGRAQI 439 +NE + +ER AD LY++K +GR +I Sbjct: 262 TKEANEMSSWVMER----ADAALYQAKNSGRNRI 291 >UniRef50_B6BGK8 Signal transduction response regulator-chey like receiver and ggdef domain n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGK8_9PROT Length = 640 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 85/157 (54%), Gaps = 20/157 (12%) Query: 298 DDLTKAMGRKSFDEDLKAL------PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LTKA R F++ + +L K + FD+D FKN+NDT+GH GD+VL +V Sbjct: 484 DQLTKAYNRVYFEKTIDSLIASNTSQNKNTGIIFFDIDHFKNVNDTYGHKAGDDVLRIIV 543 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI---------NL 402 ++K I + K+ R+GG+EF ++ +++E + KE H + +I +L Sbjct: 544 DLVKKNIRSN-DKLIRWGGEEFLILLPANSIDE---VYKEAEHLR-KTIEKHEFDIVKHL 598 Query: 403 STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + S G++ + ADE+LY++KKNGR ++ Sbjct: 599 TCSFGLSLHEATADIHESVKKADEKLYEAKKNGRNRV 635 >UniRef50_B4RRS5 Putative response regulator n=2 Tax=Alteromonas macleodii RepID=B4RRS5_ALTMD Length = 329 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 19/206 (9%) Query: 245 ASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAM 304 + C+ V + +N + + +H L L V KL YN +LDD + Sbjct: 107 SGCVDFVVKPVNACTLRNR--VKSHINHKLRNDLLEKLIYVDKLTGAYNRHYLDDY---L 161 Query: 305 GRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGK 364 R DE + P L +FD+D FK ND +GHL GD L KV K + + K Sbjct: 162 PRLVKDELRTSTPLA---LVIFDIDHFKLFNDMYGHLDGDSCLWKVSKTINDALLRPMDK 218 Query: 365 VYRFGGDEFAVIYTGGTLEELLSI----LKEIVHFQV-------GSINLSTSIGVAHSNE 413 + R GG+EF VI +E ++ LK + + G I LS + + H + Sbjct: 219 LVRIGGEEFLVILPNTDVEGATAVTERLLKTVYDLNIPHSASGYGRITLSAGLAIKHDDA 278 Query: 414 CPTVERLKMLADERLYKSKKNGRAQI 439 T++ + + AD+ LY +K +GR Q+ Sbjct: 279 SKTIDHVMLEADKNLYAAKTSGRNQL 304 >UniRef50_Q2W9B2 GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W9B2_MAGSA Length = 352 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 91/194 (46%), Gaps = 20/194 (10%) Query: 264 AIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDE--DLKALPEKGG 321 A +N E+ L+ A L + A D LT+ RK FD +L L + Sbjct: 146 ADLNRQLEQRLENSSNEVARLRNHLDDLKREASTDALTQLANRKLFDHSLNLAVLDARAA 205 Query: 322 ----YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIY 377 L + D+D FK NDT+GH LGD+VL V + L S++ K R+GG+EFAVI Sbjct: 206 DAPLSLLMIDIDHFKQFNDTYGHQLGDQVLKLVARSL-SEVAQAKDTAARYGGEEFAVIL 264 Query: 378 TGGTLEELLSILKEIVHFQVGSINLST------------SIGVAHSNECPTVERLKMLAD 425 LE+ + + E + QV + L+ SIG A E + L AD Sbjct: 265 PATPLEKSMEV-AETIRNQVSTKRLTNRRTGQVLGQVTLSIGAALLREAEAPDSLVHRAD 323 Query: 426 ERLYKSKKNGRAQI 439 E +Y +K++GR ++ Sbjct: 324 EAMYLAKRDGRNRV 337 >UniRef50_UPI0001850EBC integral membrane sensor signal transduction histidine kinase n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850EBC Length = 721 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 96/199 (48%), Gaps = 21/199 (10%) Query: 261 EKEAIINNHFERVLDGG---LFFSAADVKKLY-SMYNSAFLDDLTKAMGRKSFDEDLKAL 316 EKE +N+ VL LF S D + Y S+ SA D LT RK F E + + Sbjct: 518 EKEDKLNDQEATVLAESFQHLFVSKMDQIESYESLKRSAMFDHLTNLYNRKFFFEKAEEI 577 Query: 317 PEKGG------YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGG 370 L L D+D FK INDTFGH+ GDEVLM V L DKG + R+GG Sbjct: 578 YRVSNQLDLPLSLLLIDMDYFKKINDTFGHMKGDEVLMYVSSKLNEAFR-DKGIIGRYGG 636 Query: 371 DEF-AVIYTGGTLEEL-------LSILKEIVHFQVG-SINLSTSIGVAHS-NECPTVERL 420 +EF A++ +E ++IL G +I LS SIG++ T+ +L Sbjct: 637 EEFIAILQNADEIESYTFAENLRMTILDHPFQLPEGITIPLSLSIGISTGIKSTKTISQL 696 Query: 421 KMLADERLYKSKKNGRAQI 439 ADE LY +K NGR ++ Sbjct: 697 VQEADESLYYAKNNGRNRV 715 >UniRef50_B8D1T3 Diguanylate cyclase n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1T3_HALOH Length = 556 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 116/247 (46%), Gaps = 40/247 (16%) Query: 220 YKKDVYLRV---CTLIIFFAALVAVISGASC-LYLVRRVINRGIVEKEAIINNHFERVLD 275 +KK +Y RV C+ ++F A SC +Y + ++NRG V +II V Sbjct: 314 FKKSLYARVFSICSFVLFVLA--------SCDIYHI--LMNRGFVISMSIIG---VAVFS 360 Query: 276 GGLFF------------SAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYL 323 G+ F + KK Y + D +T L + E L Sbjct: 361 IGIVFLIIIDYIIMQGQVVYEKKKSRFFYEKSIRDSMTGIYNHHYIVSTLSRMKEPFS-L 419 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 + D+D FKNINDT+GHL GDEV+ V L++ I V R+GGDEF +I +L+ Sbjct: 420 VVLDLDNFKNINDTYGHLAGDEVIKNVAINLQNSIR-KYDYVGRYGGDEFVIILMNCSLD 478 Query: 384 ELLSILKEI--------VHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNG 435 EL + K+I ++ I ++ S+G+ ++ E E++ AD+ LY +KK+G Sbjct: 479 ELKMMAKKIKRAVEEPVYKYKGNKIRVTASMGIYNATEKEEGEQVIYRADQALYAAKKSG 538 Query: 436 RAQIS-W 441 R+ I W Sbjct: 539 RSGIKMW 545 >UniRef50_Q0G1R3 Periplasmic sensor diguanylate cyclase (GGDEF) n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G1R3_9RHIZ Length = 442 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 83/161 (51%), Gaps = 14/161 (8%) Query: 291 MYNSAFLDDLTKAMGRKSFD---EDLKALPEKGGY-----LCLFDVDKFKNINDTFGHLL 342 + AF D LT R++FD E L L E+G L L D+D FK +ND +GH Sbjct: 207 LQREAFTDSLTGLPNRRAFDQSVERLSDLRERGEVPGPVALLLIDIDHFKQVNDQWGHFF 266 Query: 343 GDEVLMKVVKILKSQIPVDKGKVY-RFGGDEFAVIYTGGTLEELLSILKEI-VHFQVGS- 399 GD+VL V ++ Q V +G + R+GG+E AVI + S+ + I + + G Sbjct: 267 GDKVLRSVSTTIRRQ--VRRGDILARYGGEEIAVILPSTQHSDACSVAERIRMAVENGEF 324 Query: 400 -INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + ++ S+GVA + L AD LY++KKNGR +I Sbjct: 325 RVKITASVGVAIDEDINAFCDLFQAADRALYRAKKNGRNRI 365 >UniRef50_C6WPQ8 Diguanylate cyclase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WPQ8_ACTMD Length = 285 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 25/173 (14%) Query: 293 NSAFLDDLTKAMGRKSFDEDLKAL-PEKGGY-----LCLFDVDKFKNINDTFGHLLGDEV 346 + D LT + R+ DE L AL E+G + L D+D FK +NDTFGHLLGD V Sbjct: 90 EQSLRDSLTDSYNRRYLDERLVALVAERGATTGGLAIALIDLDWFKQVNDTFGHLLGDRV 149 Query: 347 LMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQV--------- 397 L +VV++L++++P + G R+GG+EF ++ + + I E +V Sbjct: 150 LQRVVELLQAELP-EHGFCARYGGEEFVIVLPDVDVTSAIQI-TEAARMRVERHAWASLA 207 Query: 398 GSINLSTSIGVAH---SNECPT-----VERLKMLADERLYKSKKNGRAQISWQ 442 + ++ SIG+A+ + E P+ E+ + AD LY +K++GR ++++ Sbjct: 208 PGLRVTVSIGLAYEPPAAETPSRPPVAPEQQLLRADSLLYTAKQSGRNAVAYR 260 >UniRef50_Q0ANN0 Diguanylate cyclase n=1 Tax=Maricaulis maris MCS10 RepID=Q0ANN0_MARMM Length = 379 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 16/160 (10%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVDKFKNINDTFGHLLGDEVLM 348 A D LT A R + D+ L A ++ + +FD+D FK +NDTFGHL GD VL+ Sbjct: 204 AATDALTGAANRAAIDQILAAETDRHRETGIPFAVVVFDLDHFKRVNDTFGHLAGDRVLI 263 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT------LEELLSILKEIVHFQV---GS 399 + V+++K + + R GG+EF V+ G + + E + + + QV GS Sbjct: 264 ETVRVVKQALRTSD-MLGRIGGEEFVVVLPGVSGQQARLMAERMRKMIAAISIQVDGRGS 322 Query: 400 INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ + S GV + + L ADE LY++K+ GR ++ Sbjct: 323 VSPTASFGVTECDVNASATDLLARADEYLYRAKRGGRNRV 362 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/174 (36%), Positives = 86/174 (49%), Gaps = 31/174 (17%) Query: 286 KKLYS-MYNSAFLDDLTKAMGRKSFDE---------DLKALPEKGGYLCLFDVDKFKNIN 335 K+L S + + A D LT A R+SF E D +A P L L D+D FK +N Sbjct: 231 KRLESDLKHLATTDGLTGAYNRRSFVEVCGQELQRADRRARPTS---LLLMDIDHFKRLN 287 Query: 336 DTFGHLLGDEVLMKVV----KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE 391 D FGH GDEVL ++V ++L+S+ V R GGDEFAV+ TLE+ + ++ Sbjct: 288 DRFGHAAGDEVLRQIVETGRRVLRSE-----DVVGRIGGDEFAVLLPATTLEQAGRVAEQ 342 Query: 392 I--------VHFQVGSINLSTSIGVAH-SNECPTVERLKMLADERLYKSKKNGR 436 + V + G+ + S GVA TVE L AD LY +K GR Sbjct: 343 LRTTYERLAVPARGGTATFTVSFGVAEWKPHLRTVEELLQRADRALYAAKNAGR 396 >UniRef50_A7GS68 Diguanylate cyclase n=77 Tax=Bacillus RepID=A7GS68_BACCN Length = 431 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/172 (31%), Positives = 91/172 (52%), Gaps = 16/172 (9%) Query: 283 ADVKKLYSMYNS----AFLDDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFK 332 D+ +L +Y A +D LT+ R F + L+ + + L FD+D FK Sbjct: 253 TDITELDELYQEQERLATIDTLTEIYNRLKFQQILEEVWKSAQRNRQKIALIFFDIDDFK 312 Query: 333 NINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI 392 +NDT+GH GD L+++ +++K++I K R+GG+EF ++ T T +E + + + Sbjct: 313 KVNDTYGHDFGDLALIQLAELVKTKID-SKYTFARWGGEEFVILVTDTTEKEAFQVAESL 371 Query: 393 VHF----QVGSIN-LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 F Q SI+ L+ S GVA + T E L AD LY++K+NG+ Q+ Sbjct: 372 RFFIETKQFSSISKLTASFGVALYEQGITKEELIQRADIALYEAKQNGKNQV 423 >UniRef50_D0KW78 Diguanylate cyclase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KW78_HALNC Length = 460 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 15/165 (9%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDE----DLKALPEKGGYLCL--FDVDKFKNINDTFG 339 ++L + D LT R +FDE + + + LCL +DVD FK +NDTFG Sbjct: 287 EQLVASTQKMLRDTLTGLPNRLAFDERVALEAARMQREKTPLCLALWDVDYFKRVNDTFG 346 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------- 392 H GD+ L V K L SQ+ D V R+GG+EF ++ L++ +L+ I Sbjct: 347 HQAGDKALHVVGKTL-SQLIRDVDMVARYGGEEFVMVLPKADLQQAFVVLERIREKLAGT 405 Query: 393 -VHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 F+ + ++ S GVA T+E + ADE LY++K NGR Sbjct: 406 AFRFKDTPLKITLSCGVAEFGAGETIESVMARADEALYRAKSNGR 450 >UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KAX1_PSEFS Length = 388 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 90/161 (55%), Gaps = 15/161 (9%) Query: 293 NSAFLDDLTKAMGRKSFDEDLKALPEKGGY----LC--LFDVDKFKNINDTFGHLLGDEV 346 +A D+LT M R++F E + L E+ + LC + D+D FK INDT+GH GD+V Sbjct: 227 RAAQTDELTGLMNRRAFFEHAQVLYEQCRHNRQPLCALMMDMDHFKQINDTYGHQAGDQV 286 Query: 347 LMKVVKILKSQIPVDKGKVY-RFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSIN---- 401 L ++ ++ + + VY R GG+EFAV+ +L+ +I +++V G + Sbjct: 287 LRQIGGVISASF--RQADVYGRLGGEEFAVLLPNTSLDTARTIAEQLVKAISGLASEPVH 344 Query: 402 -LSTSIGVAHSN-ECPTVERLKMLADERLYKSKKNGRAQIS 440 LS S+GVA ++ + + L AD+ LY++K GR Q++ Sbjct: 345 GLSASLGVASTHTQDQDLHGLMNTADKALYRAKAQGRNQVA 385 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 83/159 (52%), Gaps = 15/159 (9%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEK----GGYLCLF--DVDKFKNINDTFGHLLGDEVLM 348 A D LT R+ F E L+ ++ G L L DVD+FK +NDT+GH +GDEVL Sbjct: 550 ATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDRFKRVNDTWGHAVGDEVLR 609 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSI 400 + I ++++ D V R GG+EFAV+ EE +++ + + + G + Sbjct: 610 ALAGICRAEV-RDVDTVGRIGGEEFAVLLPDTAPEEAMAVAERLRAGVEAAPLLTTAGPL 668 Query: 401 NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ S+GV+ S C + L AD LY++K GR ++ Sbjct: 669 TVTLSLGVSASPPCDGADTLLREADRALYRAKAGGRNRV 707 >UniRef50_Q1Z2S8 Putative uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z2S8_PHOPR Length = 285 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 14/164 (8%) Query: 282 AADVKKLYSMYNSAFLDDLTKAMGRKS----FDEDLKALPEKGGYLCLFDVDKFKNINDT 337 A D++ + S A D+LT + R+S FDE A+ ++ G L D+D FK +ND Sbjct: 127 ARDLEGVLS--RQALQDELTGLLNRRSLFRRFDE--MAINQQRGMLAYIDIDNFKQVNDR 182 Query: 338 FGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG---TLEELLSILKEIVH 394 FGH LGDE+L+ L +P+ ++YR GGDEF V+ +E +S L +I Sbjct: 183 FGHTLGDELLIITANSLLKTVPL-GSRIYRIGGDEFIVLLPSDDQQMCDEWISELYDITK 241 Query: 395 FQVGSINLSTSIGVA--HSNECPTVERLKMLADERLYKSKKNGR 436 G N+ SIG+A + + + AD+ +YK KK + Sbjct: 242 STRGEYNIGISIGIAPYYPGNLSDPDSILTQADKAMYKDKKTKK 285 >UniRef50_Q31FV1 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FV1_THICR Length = 411 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 17/165 (10%) Query: 288 LYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVL 347 ++ ++ A+ D LT GR++ E L K + + D+D FK+ NDT+GH +GD VL Sbjct: 225 IFDAHHIAYTDQLTGLNGRRALLESFLGLGRKYS-IAMMDIDHFKSFNDTYGHDVGDAVL 283 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF------------ 395 V L + G+VYR+GG+EF V++ G +++ L+ + + Sbjct: 284 RTVAYELSL---ISTGQVYRYGGEEFTVVFKGKQAQQVKPALEAVRYAIENRVLEVEKQG 340 Query: 396 QVGSINLSTSIGVAHSN-ECPTVERLKMLADERLYKSKKNGRAQI 439 Q ++ S G+A N + E + ADE LY++KK+GR +I Sbjct: 341 QPVETKVTVSFGLAERNDQFKKPEEVMKAADEALYQAKKSGRNRI 385 >UniRef50_B7AX06 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AX06_9BACE Length = 602 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/137 (37%), Positives = 81/137 (59%), Gaps = 10/137 (7%) Query: 311 EDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGG 370 E + A +K YL + DVD FK INDT+GH+ GD+VL KV +I++S + +GKV RFGG Sbjct: 280 ERINAGGDKAMYLAIMDVDDFKRINDTYGHMFGDQVLSKVSEIIRSVVG-QRGKVGRFGG 338 Query: 371 DEFAVIYTG----GTLEELLSIL-KEIVHFQVGSIN---LSTSIGVA-HSNECPTVERLK 421 DEF V++ L +L ++ K I+ G I ++TSIG++ + ++ + L Sbjct: 339 DEFFVLFENILDEAELRRILKVITKHILWAYSGVIKDFAVTTSIGISKYPDDGTAYDELF 398 Query: 422 MLADERLYKSKKNGRAQ 438 AD+ LY +K G+ + Sbjct: 399 KKADKSLYIAKAKGKNR 415 >UniRef50_C3X307 Predicted protein n=2 Tax=Oxalobacter formigenes RepID=C3X307_OXAFO Length = 461 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 20/184 (10%) Query: 278 LFFSAADVKKLYSMYNSAFL-------DDLT----KAMGRKSFDEDLKALPEKGG-YLCL 325 LF A D+ + M + L D LT +A K E L A K G L Sbjct: 276 LFLCAQDITSIKRMKETNQLLLFHNQHDKLTGLLNRAAAEKRIREQLYAGSGKAGNTFIL 335 Query: 326 FDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL 385 D+D+FK+IND +GHL GDEVL + + ++ ++ DK + R+GGDEF V +G E++ Sbjct: 336 IDIDRFKHINDRYGHLTGDEVLRLMGESMR-KVFRDKDILCRWGGDEFVVFVSGFADEKV 394 Query: 386 LSILKEIVHFQVGSI-------NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 + I+ + G+ ++ SIG + T+ RL +LADE LY+ K +GR Sbjct: 395 MKSRLNILREKTGTFPDQANFPGITLSIGCVCVHREITLNRLFLLADEALYEVKNHGRDG 454 Query: 439 ISWQ 442 IS++ Sbjct: 455 ISFK 458 >UniRef50_C1SHV7 Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHV7_9BACT Length = 396 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 15/159 (9%) Query: 295 AFLDDLTKAMGRKSFD----EDLKALPEKGGYLC--LFDVDKFKNINDTFGHLLGDEVLM 348 + D LT RK D E++ C L D+D FKN+ND +GHL+GD+VL Sbjct: 236 SITDHLTSLYNRKYMDIKMTEEIDRYRRMNTSFCIMLVDIDYFKNVNDNYGHLIGDQVLK 295 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTG-------GTLEELLSILKEI-VHFQVGSI 400 + K+LK I +R+GG+EF ++ T E++ LKE + S Sbjct: 296 HLAKLLKDSIR-KTDFAFRYGGEEFLIMLTNVDVRNATHVAEQIRKKLKETNFSLKENSF 354 Query: 401 NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 N++ S G+A + T E + ADERLYK+K+ GR +I Sbjct: 355 NVTASFGIALFEKDDTQESVIKRADERLYKAKQTGRNKI 393 >UniRef50_Q1J0W6 Diguanylate cyclase n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J0W6_DEIGD Length = 349 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 9/164 (5%) Query: 285 VKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALP-EKGGYLCLFDVDKFKNINDTFGHLLG 343 V ++ A+LD LT R+ FDEDL A E+G +L L D+D+FK +ND+ GH G Sbjct: 184 VGHTATLRGIAYLDALTNLHNRRQFDEDLPAFGIEEGTFLLLLDLDRFKALNDSCGHPFG 243 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIY-----TGGT--LEELLSILKEIVHFQ 396 D VL ++ +L+ + +VYR GG+EFAV+ TG E L S ++E + + Sbjct: 244 DRVLRELAVLLQQGV-RGTDRVYRLGGEEFAVLLRQTSPTGAARVAERLRSQVREQLGTR 302 Query: 397 VGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 VG +L+ +I + + AD LY++K++GR +I+ Sbjct: 303 VGRPDLTITISAGLTPCTADPDTTVRTADHLLYEAKRSGRNRIA 346 >UniRef50_C9YAH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YAH7_9BURK Length = 359 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 79/160 (49%), Gaps = 13/160 (8%) Query: 291 MYNSAFLDDLTKAMGRKSFD----EDLKALPEKGGYLCLF--DVDKFKNINDTFGHLLGD 344 + D LT R++FD + LCL D D FK ND FGH+ GD Sbjct: 195 LQEQTLTDPLTALKNRRAFDTLLANEFARSQRSKSPLCLLMVDADHFKAYNDAFGHVAGD 254 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI---- 400 + LM V +KSQ V R+GG+EF VI L E L ++ E + + SI Sbjct: 255 QALMFVSLAIKSQARA-YDHVARYGGEEFCVILPDTKLNEAL-VVAERIRESIKSIIGLR 312 Query: 401 -NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ SIGVA+S P+ +RL LAD +Y +K+ GR ++ Sbjct: 313 RPMTGSIGVAYSEGVPSPKRLVELADRAMYLAKQGGRDRV 352 >UniRef50_C0N1J5 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N1J5_9GAMM Length = 344 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 21/172 (12%) Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY---LCLFDVDKFKNINDTFGHLLG 343 +L ++ +A D LT + R +F+ +L+ L +G L LFD+D FK +NDTFGH+LG Sbjct: 176 ELEAVKQTARTDGLTGLLNRGAFNRELQNLCSQGDMVLSLALFDIDNFKRLNDTFGHVLG 235 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQ------- 396 D+VL +L D R+GG+E A+I+ LEE ++ E + Q Sbjct: 236 DKVLQYFATLLNDHRD-DIHIAARYGGEEMAMIFLHSNLEESF-LMAESIRQQFASSRLK 293 Query: 397 -------VGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 +G I +S I + P L AD+ LYKSK +GR ++++ Sbjct: 294 KKGSEESIGQITVSVGISALQLGDTPLT--LLERADKALYKSKADGRNRVNF 343 >UniRef50_B0P2M7 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P2M7_9CLOT Length = 450 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/153 (36%), Positives = 73/153 (47%), Gaps = 15/153 (9%) Query: 297 LDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKV 350 +D LT MGR+ F + + + G+ DVD FK IND GH+ GDE L K Sbjct: 296 IDFLTGVMGRRLFLQHCQNIQSDQRIQGHQGWFLFLDVDWFKQINDKLGHIAGDETLKKF 355 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVG------SINLST 404 LK Q G V R GGDEFAV+ +E+L KE+ F + +S Sbjct: 356 AMFLKEQFE-PYGAVGRVGGDEFAVMIEEEMSQEVLE--KELEQFFQNISGIQKEVTVSC 412 Query: 405 SIGVAHSNECPTVERLKMLADERLYKSKKNGRA 437 SIGV T++ L DE LY++K NGR Sbjct: 413 SIGVYRFTYPKTIKELLTKTDEILYEAKANGRG 445 >UniRef50_Q46NC3 PAS:GGDEF n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46NC3_RALEJ Length = 671 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 90/172 (52%), Gaps = 17/172 (9%) Query: 283 ADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL---PEKGG---YLCLFDVDKFKNIND 336 A+ +K+ S+ + D LT + RK FD L++ E+G L L D+D FK +ND Sbjct: 480 AERQKMRSLEQTTMSDYLTGLLNRKGFDRRLESAMVQSEEGSKIMALLLVDIDNFKLVND 539 Query: 337 TFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG-TLEELLSILKEIVHF 395 T+GH +GD++L V LKS + V R GGDEFAVI T + +L + + I+ Sbjct: 540 TYGHPVGDKLLNVVATRLKS-CAGETCAVARVGGDEFAVILEDVLTSDAVLRVARAILSA 598 Query: 396 QVGS-------INLSTSIGVAHSNECPTVERLKML--ADERLYKSKKNGRAQ 438 + I STS+G A N C R ++L AD LY +K +G+A+ Sbjct: 599 TCETFILNGYQIACSTSVGAALKNPCDNNTRNELLLKADTALYSAKHSGKAR 650 >UniRef50_B9K4F3 GGDEF family protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K4F3_AGRVS Length = 568 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 9/125 (7%) Query: 323 LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL 382 L + DVD FK INDTF H++GD VL+++ ++K + + RFGG+EF ++ T TL Sbjct: 426 LAILDVDHFKKINDTFSHIIGDRVLVQIGTLVKV-VVRETDIAVRFGGEEFVILMTDLTL 484 Query: 383 ---EELLSILK-EIVHFQVGSI----NLSTSIGVAHSNECPTVERLKMLADERLYKSKKN 434 E + L+ I +F I N+S SIGVA S++ E + LAD RLY +K+ Sbjct: 485 AHAERVSERLRMTITNFDWSEIADGLNVSVSIGVAMSDDAVDAEAVLQLADRRLYWAKQT 544 Query: 435 GRAQI 439 GR ++ Sbjct: 545 GRNRV 549 >UniRef50_D1AZZ8 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZZ8_SULD5 Length = 315 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 90/155 (58%), Gaps = 17/155 (10%) Query: 297 LDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVDKFKNINDTFGHLLGDEVLMKV 350 +D LTK R+ +DL+ + G +L +FD D FK+IND FGH+ GD+ L+ + Sbjct: 156 IDPLTKTHNRRVLVKDLEEVLSFGKEKDLDMHLVMFDADDFKSINDAFGHIAGDKTLIFL 215 Query: 351 VKILKSQIPVDKG-KVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSIN 401 K++++ + +G ++YR+GG+EF VI +L+E + I+ I+ ++ I+ Sbjct: 216 SKLIQNSLR--RGTRIYRYGGEEFVVILNRTSLDEAIKIIDRILKETSDSKLLYKNHDIH 273 Query: 402 LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 L+ S G+ + +V+ + AD+ LY++KK+G+ Sbjct: 274 LTLSAGICSHRQNMSVDEILDKADKALYEAKKSGK 308 >UniRef50_Q31JI7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31JI7_THICR Length = 420 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 25/210 (11%) Query: 253 RVINR----GIVEKEAIINNHFERVLDGGLFFS-----AADVKKLYSMYNSAFLDDLTKA 303 R++NR +E I+ F R D F S + VK + + A D LT Sbjct: 212 RIMNRCKDGSTYYEETTISPIFNRDGDIEYFVSTGKDVSEQVKMQQELNDLAMKDALTGI 271 Query: 304 MGRKSFDE----DLKALPEKGGY--LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQ 357 R+ + ++K + GG + +FDVD FK IND FGH +GDE L+++ KI++ + Sbjct: 272 WNRRHLTDVVNTEMKRVNRYGGRFGMIMFDVDYFKQINDDFGHDIGDETLVQIAKIVQ-K 330 Query: 358 IPVDKGKVYRFGGDEFAVI-------YTGGTLEELLSILKEIVHFQVGSINLSTSIGVAH 410 I + + R+GG+EF +I T E++ ++E V +VG + +S V H Sbjct: 331 IVRETDYIGRWGGEEFLLIALELDASLTAKLAEKIREAIEEFVFPKVGQVTVSLGATVYH 390 Query: 411 SNECPTVERLKMLADERLYKSKKNGRAQIS 440 NE T +L ADE LY +K++GR ++ Sbjct: 391 KNE--TEAQLFKRADEALYLAKRHGRNRVE 418 >UniRef50_A8LJ52 Putative uncharacterized protein n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LJ52_DINSH Length = 346 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 84/158 (53%), Gaps = 15/158 (9%) Query: 295 AFLDDLTKAMGRKSFD---EDLKALPEKGGY-LCLFDVDKFKNINDTFGHLLGDEVLMKV 350 A D LT R++ D E L A P + G+ L L D+D FK++NDT GH GD VL++V Sbjct: 171 ALTDTLTGLHNRRAMDLTFEQLLANPPRDGFGLMLIDLDYFKSVNDTLGHAAGDMVLLEV 230 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTG----GTL----EELLSILKEIVHFQVGSINL 402 +IL+ + + +R GGDEF ++ G + + +++ L+E ++ + Sbjct: 231 ARILREETRSEDFS-FRVGGDEFVLVLRNCNDLGLMTRVADRIIARLEEPFYYDGKPCRI 289 Query: 403 STSIGVAHSNECPTVERLKML--ADERLYKSKKNGRAQ 438 S SIG+ S VE KML ADE Y SK GRAQ Sbjct: 290 SASIGITISEFYDPVEIDKMLSDADEATYASKNRGRAQ 327 >UniRef50_Q6FA46 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FA46_ACIAD Length = 352 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 18/157 (11%) Query: 295 AFLDDLTKAMGRKSFDEDLKAL------PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLM 348 A +D R+ F++ L ++ +L L DVD FK INDT+GH GD L Sbjct: 193 ALMDPRLHIPNRRLFEQRLSSIFMQTQRNASSAHLILLDVDHFKKINDTYGHEAGDYFLA 252 Query: 349 KVVKILKSQI-PVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINL----- 402 ++ IL+ I P D RFGGDE A+I + EE++ + + I + + I L Sbjct: 253 EMSSILRELIGPKDTPA--RFGGDELAIIVVDQSNEEIILLARRIKN-SIQQIRLQSDPE 309 Query: 403 ---STSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 + SIG+A + TV LAD+ LY+ K+NGR Sbjct: 310 FSTTVSIGIASAETVDTVSAWFALADKALYQVKRNGR 346 >UniRef50_A5L069 Sensory transduction/ GGDEF family protein n=2 Tax=Vibrionales RepID=A5L069_9GAMM Length = 416 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 14/161 (8%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLC--LFDVDKFKNINDTFGHLLGDEVL 347 + + A D++T + R++ E + +L L D+D FK+INDT+GH++GDEV+ Sbjct: 246 QLVHQANYDEMTDLLNRRAIYEWFREQMTSDNHLVCMLLDIDDFKSINDTYGHMVGDEVI 305 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------VHFQVGS-- 399 + I K + G R+GG+EF V T E I ++I F++ Sbjct: 306 CALANITKRSVESVGGVAGRWGGEEFIVFIPNATAEMSCEISEQIRQQFNQAEFKIDEQT 365 Query: 400 -INLSTSIGVAHSNECP---TVERLKMLADERLYKSKKNGR 436 N S SIG++ S C T++ L L D+ LY++K NG+ Sbjct: 366 RFNSSVSIGMSDSLACEERMTIDALVNLTDQSLYRAKANGK 406 >UniRef50_D2BSV0 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech586 RepID=D2BSV0_DICD5 Length = 294 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/153 (36%), Positives = 81/153 (52%), Gaps = 8/153 (5%) Query: 293 NSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 SA D+LT+ R+ F E L K + + D+D FK+IND+ GH +GDEVL + Sbjct: 139 TSALYDELTRLPNRRYFVETLSNTTNKKMSMMIIDIDFFKHINDSRGHDVGDEVLSRFGD 198 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------VHFQVGSINLSTSI 406 LK I V KV+R GG+EFAVI G + E++ + I + G +S SI Sbjct: 199 QLK-DISVTALKVFRIGGEEFAVIGEGLSRYEVIRYAEAICRDARNIRLDDGQ-GISVSI 256 Query: 407 GVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 GV + + L D+ LY++K+NGR +I Sbjct: 257 GVGFRKVGESQQSLIKKTDKALYRAKENGRNRI 289 >UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii SH145 RepID=D0SXM5_ACILW Length = 440 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 16/165 (9%) Query: 290 SMYNSAFLDDLTKAMGRKSF----DEDLKALPEKGGY-LCLFDVDKFKNINDTFGHLLGD 344 ++ N A DDLT+ R+ F + + P+ L +FDVD FKNIND++GH +GD Sbjct: 243 TLKNLAHTDDLTQLYNRRHFVDMAERSIHQWPKHASSCLLMFDVDHFKNINDSYGHDVGD 302 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELL--------SILKEIVHFQ 396 VL + ++ + ++ + RFGG+EF + L++ L +I K+ ++ + Sbjct: 303 RVLQLIAEVTRKEM-RHSDVLARFGGEEFIALLEDTQLQDSLVIAERIRCAIQKQYIYVE 361 Query: 397 VG-SINLSTSIGVAH-SNECPTVERLKMLADERLYKSKKNGRAQI 439 +I + SIGVA + +E L AD LY++KK+GR +I Sbjct: 362 PNHTIRFTISIGVAELESHTQPLEDLIKQADIALYQAKKSGRNRI 406 >UniRef50_UPI0001C427B8 response regulator receiver modulated diguanylate cyclase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C427B8 Length = 446 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 22/163 (13%) Query: 297 LDDLTKAMGRKSFDEDLKAL---PEKGG---YLCLFDVDKFKNINDTFGHLLGDEVLMKV 350 +D LT R+SFD+ L+A E+ G L + D+D FK+ NDT+GH GD+ L KV Sbjct: 281 IDGLTGIPNRRSFDKTLQAEWDESERAGSLLTLIMLDLDSFKHFNDTYGHQKGDDCLRKV 340 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEE---LLSILKEIVHFQVGSINLSTSI- 406 + + KG + R+GG+EF VI G +LEE L +KE+V +Q+ I TS+ Sbjct: 341 AVAIDRVVQDHKGFLARYGGEEFTVIKRGASLEESRYLAEEIKEVV-YQL-QIPHQTSVI 398 Query: 407 ----------GVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 V + C + L AD+ +Y++KK GR Q+ Sbjct: 399 DNVVTVSVGVAVKQNEHCRDSKMLFDWADQAMYQAKKKGRNQV 441 >UniRef50_A8HV12 Putative uncharacterized protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HV12_AZOC5 Length = 372 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 77/304 (25%), Positives = 133/304 (43%), Gaps = 34/304 (11%) Query: 152 SLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYL 211 SL +L L R+ +++ +A L F+ + + ++T++ ++ L Sbjct: 69 SLFLMLALPRWHRMAEWIAY----LSFTTYCLVGVAAFGHLAEQTRLYTIANTLQWMPML 124 Query: 212 PTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFE 271 ++ ++D + + + + + V AS YL RV+ ++ + H Sbjct: 125 YVASFILLQRRDAVIAAALVFLSMSIPIVVEFSASDSYLKDRVLGSLVINAYLV---HLV 181 Query: 272 RVLDGGLFF--------SAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY- 322 ++ LF + A K L +M ++ D LT M R+ ++ L+ + GG Sbjct: 182 ILVSLSLFVMTSLAFEQARAKAKALETMAST---DSLTGTMNRRGLEQILRHV--AGGSS 236 Query: 323 ----LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT 378 L L D+D FK INDT+GHL GD VL V K L + D V R+GGDEF +I Sbjct: 237 GEIGLILIDIDNFKPINDTYGHLAGDAVLQAVAKRLAGVVR-DSDVVGRWGGDEFLIITR 295 Query: 379 GGTLEELLSILKEI-----VHFQVG-SINLSTSIGVAHSNECPTVERLKMLADERLYKSK 432 L +++++ H G + LS +GV + P + L+ + D LY +K Sbjct: 296 DAQLTDVIAMADRARQHVGTHVLAGMRVTLSAGVGV-WDGQGPWADALQRI-DRALYSAK 353 Query: 433 KNGR 436 GR Sbjct: 354 AEGR 357 >UniRef50_A1B8E3 Diguanylate cyclase n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B8E3_PARDP Length = 320 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 81/156 (51%), Gaps = 14/156 (8%) Query: 298 DDLTKAMGRKSFD----EDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKI 353 D LT + R+ FD ++ L D+D FKNIND FGH GD VL+ V Sbjct: 165 DPLTGLLNRRGFDIAFSRAFDQRDKRPFALVHLDLDHFKNINDEFGHAAGDRVLVGVASA 224 Query: 354 LKSQIPVDKGKVYRFGGDEF-AVIYTGGTLEELLSILKEI------VHFQVGSINLSTSI 406 L S++ +V R GGDEF A+I+ + L+I K I V GS +S SI Sbjct: 225 LASEVRSGD-RVCRAGGDEFLALIFADWPAADSLNICKRIIGRIGSVEAGPGSGRISASI 283 Query: 407 GVAHSNECPTV--ERLKMLADERLYKSKKNGRAQIS 440 G+A S+ P V +L LAD LY++K +GR +++ Sbjct: 284 GIAVSDSKPAVLPHQLFELADAALYRAKISGRGRVA 319 >UniRef50_A6Q580 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q580_NITSB Length = 332 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 12/158 (7%) Query: 294 SAFLDDLTKAMGRKSFDEDLKALPEKG--GYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 A D LT R + +++K L E + + D+D FK INDTFGH+ GD+VL ++ Sbjct: 173 EAVHDPLTNLYNRNALKKEIKLLEEASLPYSVIIIDIDDFKKINDTFGHIAGDKVLRELG 232 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE---ELLSILKEIVHFQV------GSINL 402 +I + + D KVYR+GG+EF +I ++ +L LKE++ +I + Sbjct: 233 EIFHTYVRKD-SKVYRYGGEEFLIILLHTDIDGAKKLAQRLKEVISHHTIVLDDGTNIIV 291 Query: 403 STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + S G+A + ER+ AD+ LYK+K++G+ ++ Sbjct: 292 TASFGIAQKKGDESFERVLKRADQALYKAKRDGKNRVE 329 >UniRef50_C0C066 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C066_9CLOT Length = 604 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 13/170 (7%) Query: 282 AADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK--GGYLCLFDVDKFKNINDTFG 339 + + KK ++ A D+L+ + R +F E ++ ++ GG L L D+D FK+IND +G Sbjct: 435 SGEKKKEMALVRKAERDNLSGLLNRGAFKEQVQEYIQQSQGGCLFLIDLDNFKDINDKYG 494 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS 399 HL GDE + KV ++LK+ K + R+GGDEF G +++ V +V + Sbjct: 495 HLAGDESIRKVGEVLKTCFRA-KDIIGRYGGDEFFAFVPGRMTRDVIDGRAADVVHKVAA 553 Query: 400 INL--------STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 I L + S+G+ E T + ADE +YK+K G+ SW Sbjct: 554 ITLDEAPDLHFTCSVGIVRCGEGSTFKDCLKRADEAMYKAKDRGKN--SW 601 >UniRef50_A5EN18 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=3 Tax=Bradyrhizobium RepID=A5EN18_BRASB Length = 833 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/156 (35%), Positives = 88/156 (56%), Gaps = 14/156 (8%) Query: 295 AFLDDLTKAMGRKSFDEDLKAL-PEKGGYLCLF--DVDKFKNINDTFGHLLGDEVLMKVV 351 A D LT R F E+++ + EKGG +F D+D+FKN+ND+ GH GDE+L++V Sbjct: 373 AQTDALTGLANRAFFLEEMERINDEKGGRFTVFLLDLDRFKNVNDSLGHGAGDELLVQVA 432 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTG-----GTLEELLSILKEIV--HFQVGS--INL 402 + L+SQ+ ++ + R GGDEFA+I G + EL + ++ FQ+ + + Sbjct: 433 QRLRSQL-REEDVLARLGGDEFALIQAGFSDQRASATELAQRITRLIAEPFQISGQRVEI 491 Query: 403 STSIGVAHSNE-CPTVERLKMLADERLYKSKKNGRA 437 TSIG++ + + E L AD LY+SK GR+ Sbjct: 492 GTSIGISLAPQHGRDQEHLLKKADLALYRSKSAGRS 527 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 8/123 (6%) Query: 323 LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL 382 L +FD+D FK+IND+FGH +GD+VL + K++ I + R+GG+EF +I T Sbjct: 649 LIMFDIDFFKHINDSFGHDVGDKVLKAIAKVVSENIR-NTDIFARYGGEEFVIIAPETTK 707 Query: 383 E------ELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 E E L L +HF+ G IN++ S GVA + T E L ADE LY++KK GR Sbjct: 708 EDAKILAEKLRSLIRNLHFEEG-INVTCSFGVASLEKHDTKETLLKRADEALYEAKKTGR 766 Query: 437 AQI 439 ++ Sbjct: 767 NKV 769 >UniRef50_B8KAC4 Ggdef family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8KAC4_VIBPA Length = 490 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 82/161 (50%), Gaps = 17/161 (10%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEKGG---YLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 A D LTK R+S + + L EK L L D+D FK ND +GH+ GD VL +V Sbjct: 324 AHHDALTKVGNRRSLQQHWQTLVEKQPKHTSLLLIDIDFFKPFNDHYGHVEGDNVLQQVA 383 Query: 352 KILKSQIPVDKGK-VYRFGGDEFAVIYTGGT----------LEELLSILKEIVHFQVGSI 400 LK + P + K V RFGG+EF V+ + + L + LK H+ + Sbjct: 384 TALK-EAPTESSKFVARFGGEEFCVVLSNDSPLNNRQEAEWLRAAVETLKIRHHYSPIAA 442 Query: 401 NLSTSIGVAHSNECP--TVERLKMLADERLYKSKKNGRAQI 439 +L+ SIGVA P ++ L ++AD LY++K GR Q+ Sbjct: 443 HLTASIGVADCGLQPLGDLQDLFLVADRALYEAKDAGRNQV 483 >UniRef50_Q6MN29 GGDEF domain protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MN29_BDEBA Length = 408 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 14/165 (8%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFG 339 K+L + D LT A R+S+DE ++ + + L + D+D FK IND++G Sbjct: 229 KQLMEANTTMRKDHLTGAHNRRSYDEQIRRYLQLHEIDKDPMTLIIMDIDFFKKINDSYG 288 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL--------EELLSILKE 391 H +GD VL + V++++ ++ + R GG+EFAVI G E + I KE Sbjct: 289 HDIGDFVLQECVRLIQESFSREEDFIARLGGEEFAVILPGCDAQAAVRMAEEAMNRIRKE 348 Query: 392 IVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 + + I + S+G+A + L ADE LY+SK+ GR Sbjct: 349 VFVHEKFEIRFTVSLGIAEVMPGEKADALYKRADEALYESKQTGR 393 >UniRef50_A5VMQ1 Diguanylate cyclase n=5 Tax=Lactobacillus RepID=A5VMQ1_LACRD Length = 369 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 16/158 (10%) Query: 298 DDLTKAMGRKSFDEDLKALPEKGG----YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKI 353 DDLT + ++ +++ L + D+D FK INDT+GH +G+EVL + Sbjct: 190 DDLTGLLNYRALSQEINRLANNNEIHNIVIGALDIDHFKKINDTYGHFVGNEVLNYFSTV 249 Query: 354 LKSQIPV---DKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH-FQVGSINLSTSIGVA 409 + QI G VYRFGG+EF ++ + +LEE+ +L+ I F SI + + Sbjct: 250 FREQIHSAFPKHGYVYRFGGEEFTIVVSNHSLEEVYQLLQSIEKFFNNKSIVTKEGMKLT 309 Query: 410 HSNECPTVERL--KML------ADERLYKSKKNGRAQI 439 S C +RL ++L AD+ LY K NGR I Sbjct: 310 ISFSCSLTDRLNDELLDTTLKRADKMLYSVKNNGRGWI 347 >UniRef50_UPI0000E0EEC9 GGDEF domain-containing protein n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0EEC9 Length = 574 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/156 (35%), Positives = 86/156 (55%), Gaps = 15/156 (9%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEK-----GGY-LCLFDVDKFKNINDTFGHLLGDEVLM 348 A +D LT R FD +LK + ++ GG+ L L D+D FK INDT GH +GDE+L Sbjct: 151 AEIDQLTGLENRYMFDRNLKKMFQQHSVVSGGFALLLLDLDHFKTINDTLGHSVGDELLT 210 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH-----FQVGSINL- 402 +K+ I + KVYR GGDEF +I T E+ ++ +++ + + +N+ Sbjct: 211 AAALRIKNNIR-QECKVYRLGGDEFGIISTLKNKHEIEQLVPRLMNTLNTPYALTDMNIE 269 Query: 403 -STSIGVA-HSNECPTVERLKMLADERLYKSKKNGR 436 ++SIG+A + ++ + E L AD LY +K GR Sbjct: 270 CTSSIGIAIYPDDASSAESLYKHADMALYIAKDEGR 305 >UniRef50_B8G2F8 Diguanylate cyclase n=2 Tax=Desulfitobacterium hafniense RepID=B8G2F8_DESHD Length = 473 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 14/166 (8%) Query: 285 VKKLYSMYNSAFLDDLTKAMGRKSFDEDLK-----ALPEKGGYLCL-FDVDKFKNINDTF 338 +++ + A D LT + R+ F++ ++ L +L L D+D+FK +NDT Sbjct: 308 IRQREELARLANTDRLTGILNRQGFEQRVREEIASTLRRDSRFLFLVLDLDRFKQLNDTL 367 Query: 339 GHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL-EELLSILKEI---VH 394 GH +GD L ++ + L+ + ++ V R GGDEF V+ T L EE L++++ + +H Sbjct: 368 GHPMGDRALKEIAQNLRCAVR-EQDIVARTGGDEFTVVLTDIALNEESLTVIERMRKSMH 426 Query: 395 FQVGSINLSTSIGVAH-SNECPTVERLKMLADERLYKSKKNGRAQI 439 + NL SIGVA E T + L LAD+RLY+ K +G+ I Sbjct: 427 LE--EYNLGVSIGVAEFPTEGRTYDELYRLADQRLYRGKNSGKGNI 470 >UniRef50_C5B8C0 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=C5B8C0_EDWI9 Length = 351 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 16/169 (9%) Query: 284 DVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLC--LFDVDKFKNINDTFGHL 341 + +++ SA D LT+ R+ + + L C + D+D FK IND +GHL Sbjct: 183 SISAYFTLSESALRDQLTQTNNRQGLQQQILRLEHSRSACCIAMIDIDNFKQINDRYGHL 242 Query: 342 LGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------- 392 GD VL + I SQ + + RFGG+EF +++ G TLE + ++I Sbjct: 243 CGDRVLTAIAAI-ASQTLQPRDYMARFGGEEFVILFPGKTLERANARCEQIRQAICATPL 301 Query: 393 --VHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 H Q I S S G+++ + ++++ AD LY++K+ G+ ++ Sbjct: 302 YLCHDQ--QIRASASFGLSYFDGRDSLQQAIARADGALYRAKRRGKNRV 348 >UniRef50_C6BSU0 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSU0_DESAD Length = 333 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 12/141 (8%) Query: 311 EDLKALPEKGGYLC--LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRF 368 E+++ +GG L + DVD FKN+NDT+GH GD VL V IL R+ Sbjct: 190 EEIQRFKRRGGPLSVIMIDVDNFKNVNDTYGHATGDAVLRSVGHILHENSRQGVDIPCRY 249 Query: 369 GGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIGVAHSNEC--PTVE 418 GG+EF ++ G E + + I + G I ++ S G+A EC P+ + Sbjct: 250 GGEEFVILMPGSEKREAEIVAERIRAACEDATISAPEGKIKITASCGIASVEECQEPSAD 309 Query: 419 RLKMLADERLYKSKKNGRAQI 439 L +AD+RLY +K++GR ++ Sbjct: 310 ALLNIADKRLYCAKESGRNRV 330 >UniRef50_C8WUQ5 Diguanylate cyclase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WUQ5_ALIAD Length = 402 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 15/159 (9%) Query: 298 DDLTKAMGRKSFDEDLK-ALPEKGG-----YLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LT RKSFDE L AL G +L + D+D FK IND +GHL+GDE+L + Sbjct: 240 DALTGLYNRKSFDEYLDFALQISDGTNTPLHLAVIDIDNFKQINDQYGHLVGDEILRRTA 299 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV-------HFQVGSINLST 404 + ++ + + R+GG+EFAVI T E+ + +++I H ++ + Sbjct: 300 QAIQQHLAAGD-FLARYGGEEFAVIIPEVTHEQAVQNMEKIREYIANVHHVELDGNRATV 358 Query: 405 SIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI-SWQ 442 SIG++ T + L AD+ LY++K+ G+ +I +W+ Sbjct: 359 SIGLSTHRPGETRDELFERADQCLYRAKQTGKNKIVAWE 397 >UniRef50_B7VPC0 Intracellular signaling protein (PAS,GAF,GGDEF domains) n=5 Tax=Vibrionales RepID=B7VPC0_VIBSL Length = 356 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 20/164 (12%) Query: 294 SAFLDDLTKAMGRKSFDEDLKALPE--KG----GYLCLFDVDKFKNINDTFGHLLGDEVL 347 A D LT R+ + L A E KG G L + D+D FK +NDT+GH +GD VL Sbjct: 181 QALYDPLTHLPNRRCLFKTLNAEVEQLKGSLGKGTLAVVDIDFFKQVNDTYGHQMGDVVL 240 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL----EELLSILKEIVHFQVGSINLS 403 KV +L++ I D V RFGG+EF + Y T ++ +++L+E+ + S ++ Sbjct: 241 KKVANVLRNNIQ-DGEFVARFGGEEFILWYPNSTPSCVEDKFMTLLQEMKKITLDSKPIT 299 Query: 404 TSIGVAH---SNECPTVERLKML------ADERLYKSKKNGRAQ 438 SIG H S ER+ L ADE LY +K+NGR Q Sbjct: 300 ISIGACHFELSTGDSKGERMSALDSLIKVADECLYIAKQNGRDQ 343 >UniRef50_A8W114 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W114_9BACI Length = 368 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 16/158 (10%) Query: 297 LDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVDKFKNINDTFGHLLGDEVLMKV 350 +D T K+F E L L E+ L + D+D FK +NDT+GH +GD++L ++ Sbjct: 209 VDAPTGLYNHKTFQEYLAYLFEQSSTSSYRFQLAMLDIDNFKQVNDTYGHAVGDKILERI 268 Query: 351 VKILKSQIPVDKGKVY-RFGGDEFAVIYTGGTLEELLSILKEI-------VHFQVGSINL 402 I+++ VD + R+GG+EF V++T + E L +++ I H ++G N+ Sbjct: 269 AGIIQAN--VDANDIASRYGGEEFGVLFTDCSFETALHVVETIRLEIERLPHEEMGGRNV 326 Query: 403 STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + SIG+ + L AD LY +KKNG+ +I Sbjct: 327 TVSIGLVEYTDEEQAPVLFEKADTLLYLAKKNGKNRIE 364 >UniRef50_B8DKM1 Diguanylate cyclase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DKM1_DESVM Length = 356 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 37/179 (20%) Query: 298 DDLTKAMGRKSFDEDLKA--LPEKGGY---LCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 D LT R++FD L A KGG L LFDVD+FK IND GH +GD+VL V + Sbjct: 171 DPLTGLGNRRAFDTALTAGEAAWKGGTALALVLFDVDRFKRINDQHGHRIGDQVLRTVAE 230 Query: 353 ILKSQIP------VDKGK--------VYRFGGDEFAVIYTG------GTLEELLSILKEI 392 +L+ ++ D+ + V RFGG+EFA++ TG G + E + E Sbjct: 231 VLRRKVDDCNRSLNDEAEGAGECASVVARFGGEEFALVLTGEGAQRAGEIAESVRAGLES 290 Query: 393 VHFQV---------GSINLSTSIGVAHSNEC---PTVERLKMLADERLYKSKKNGRAQI 439 V+F + + ++ S GVAH+ P + L LAD+ LY++K+ GR ++ Sbjct: 291 VNFAIRDGQGHVVEHGVRVTLSAGVAHARPGMPEPLTDALFDLADKALYEAKREGRNRV 349 >UniRef50_A6C9X3 GGDEF domain-like protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C9X3_9PLAN Length = 657 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 29/172 (16%) Query: 291 MYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLC----------LFDVDKFKNINDTFGH 340 + + A D LTK R F+E+ EK Y C D+D+FKN+NDT+GH Sbjct: 338 LQSKAIHDPLTKTYNRSYFNENF----EKELYSCSRDAQPIGIIFSDIDRFKNLNDTYGH 393 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVY-RFGGDEFAVIYTGGT------LEELLS--ILKE 391 GD VL +V K+ + V+ R+GG+EF ++ T L E L I E Sbjct: 394 QFGDLVLQRVAKVASES--TRRSDVFCRYGGEEFVIMVNNPTENGIRDLAERLRKLIENE 451 Query: 392 IVHFQVGSINLSTS----IGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ F+ + ++ S +G+ + ERL ADE +Y+SK+NGR Q+ Sbjct: 452 VIEFEGARVPVTASLGAVVGIPPRDLTGFAERLVAEADEAMYESKENGRNQV 503 >UniRef50_C1CWH3 Putative Diguanylate cyclase (GGDEF domain protein) n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWH3_DEIDV Length = 382 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/157 (33%), Positives = 78/157 (49%), Gaps = 8/157 (5%) Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY--LCLFDVDKFKNINDTFGHLLGD 344 +L +M A D LT A R++ +E L+ L G + LFD+D FK +ND GH GD Sbjct: 209 RLNAMQVVASHDALTGAANRRAAEERLQTLHRAGERYTVILFDIDHFKRVNDEHGHATGD 268 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK----EIVHFQVGSI 400 VL+ V + + +P D R+GG+EF +I EE+ +L+ E+ + G Sbjct: 269 LVLVNVTRCARQLLP-DSAFFARWGGEEFLIILPSLPKEEVYELLRTLRAELRNQTFGPQ 327 Query: 401 -NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 ++ GVAH T E + ADE +Y K GR Sbjct: 328 KGVTACFGVAHVRPGETPEEIVARADEAMYARKNRGR 364 >UniRef50_A9W1F1 Diguanylate cyclase n=7 Tax=Alphaproteobacteria RepID=A9W1F1_METEP Length = 697 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 15/157 (9%) Query: 291 MYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCL--FDVDKFKNINDTFGHLLGDEVLM 348 M A D LT + R F + + G +CL D+D FK++ND +GH GD VL Sbjct: 263 MRERATHDGLTGLLNRAGFIQRAEEQLAAGASVCLMLLDLDGFKSVNDVYGHSTGDRVLA 322 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIY-TGGTLEELLSILKEIVH--------FQVGS 399 +V + ++ +PVD R GGDEFA++Y T +E ++ + ++ F G Sbjct: 323 EVARRIRVAVPVDC-DAARLGGDEFALVYDTARVIESPAALAERLIRTVAQPFESFDTGR 381 Query: 400 INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 + + SIG+ H ++ L ADE LY +K +GR Sbjct: 382 LGM--SIGICH-RPSDSLTHLLSCADEALYAAKHSGR 415 >UniRef50_Q1YJ80 GGDEF domain n=2 Tax=Aurantimonadaceae RepID=Q1YJ80_MOBAS Length = 271 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/164 (35%), Positives = 86/164 (52%), Gaps = 15/164 (9%) Query: 291 MYNSAFLDDLTKAMGRKSFD---EDLKALPEKGGY---LCLFDVDKFKNINDTFGHLLGD 344 + +A D LT R+ FD E+ ++ G L LFD+DKFK +NDT+GH +GD Sbjct: 96 LEQAALTDPLTGLRNRRCFDRMFEEYVVAFDRVGRPVGLLLFDLDKFKAVNDTYGHDVGD 155 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------VHFQVG 398 EVL KVV + + V R GG+EFA+I T + L+S + I + +VG Sbjct: 156 EVL-KVVAGCLTDFARHRDVVARLGGEEFAIIVTNMSAPGLVSFAERIRQAISGLTIRVG 214 Query: 399 SINLST--SIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + L T S+G+A S + AD LYK+K+ GR ++S Sbjct: 215 DVKLRTTVSVGLASSEPGDGCAAIFKRADVNLYKAKQAGRNRVS 258 >UniRef50_Q12JJ7 GGDEF domain n=1 Tax=Shewanella denitrificans OS217 RepID=Q12JJ7_SHEDO Length = 580 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 28/169 (16%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLF------------DVDKFKNINDT 337 +M AF D LT R++ E G YL F D+D FK +NDT Sbjct: 414 NMRQLAFTDPLTGLSNRRA------GTVETGAYLSRFKQDNLALSVAILDIDFFKRVNDT 467 Query: 338 FGHLLGDEVLMKVVKILKSQI-PVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--- 393 +GH GDEVL+ ++LK+ + P D ++YR+GG+EF V++ G + + + + Sbjct: 468 YGHSRGDEVLISFARLLKATVRPSD--RLYRWGGEEFLVLFPGADIAAATQVCERLCHTI 525 Query: 394 ---HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 HF+ G +++S+GV ++ +++ L AD LY++K+ GR ++ Sbjct: 526 ASKHFE-GVGRITSSLGVTEASLDDSLDSLVSRADVALYQAKQQGRNRV 573 >UniRef50_B9ZS89 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZS89_9GAMM Length = 896 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 94/192 (48%), Gaps = 30/192 (15%) Query: 263 EAIINNHFE-RVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGG 321 EA+ NH E ++ D G+ L +YN +L M R E ++A G Sbjct: 715 EALQRNHLEIQLRDLGI------TDPLTGLYNRRYL------MER--LREQIEAWRRHGE 760 Query: 322 --YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT- 378 + + D+D FK +NDT GHL GDEVL +L+ Q V RFGG+EF V+ T Sbjct: 761 DFAVAILDLDHFKTLNDTHGHLAGDEVLRNFGDLLRRQHRA-FDIVARFGGEEFIVVLTR 819 Query: 379 ------GGTLEELLSILKEI-VHFQVGSINLSTSIGVAHSNECP----TVERLKMLADER 427 +E LL +E+ F+ S+ + S G+A S+EC T E L AD+R Sbjct: 820 VDHEAATTAIERLLEATRELDTRFEDESLAFTVSAGLAWSDECDPGHLTPETLINRADDR 879 Query: 428 LYKSKKNGRAQI 439 LY++K GR ++ Sbjct: 880 LYRAKAQGRDRL 891 >UniRef50_A1S4I5 Diguanylate cyclase n=8 Tax=Shewanella RepID=A1S4I5_SHEAM Length = 562 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 84/166 (50%), Gaps = 9/166 (5%) Query: 283 ADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKNIND 336 A +++L S + A +D LT+ R +FDE L+ K L L DVD K +ND Sbjct: 392 AYIEELSSAWEKARVDSLTQIGNRYAFDEYLQTCHTFGEAVTKPTALVLLDVDGIKKVND 451 Query: 337 TFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK--EIVH 394 T GH +GDE+L +V+ LKS + + K K++R GGDEFA+ G L + S L+ E + Sbjct: 452 TLGHQVGDELLRTLVQELKS-LDIPKLKLFRVGGDEFALFLDGAFLSLVTSKLENIETIF 510 Query: 395 FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + G + S G A +E AD +Y K R +++ Sbjct: 511 ARQGFTDAGVSFGYALDSEVHKSHEWLRSADTSMYSLKAEKRRELA 556 >UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepID=Q21NS3_SACD2 Length = 319 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 20/195 (10%) Query: 257 RGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA- 315 RG VE +I V L AA+++ ++ + D LT + RK+++ D + Sbjct: 122 RGKVEHICLIVYDVTEVAVNRLQIQAANLQ----LHEISRTDGLTGLLNRKTWELDAEQE 177 Query: 316 -----LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGG 370 E L +FD+D FKNIND++GH GDEV+ + +KS I D R+GG Sbjct: 178 YKRFKRHEHPCSLVMFDIDHFKNINDSYGHPAGDEVIRQTAAAVKSCI-RDIDIAGRYGG 236 Query: 371 DEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIGVAHSNECPTVERLKM 422 +EF ++ + E L + + I VH++ +I + S+GVA + T + Sbjct: 237 EEFTIVLSDTDTEGALVVAERIRNQIQELTVHYEDFAIQFTVSLGVAQLTQQMTNRTAWI 296 Query: 423 -LADERLYKSKKNGR 436 AD+ LY++KKNGR Sbjct: 297 DCADKALYQAKKNGR 311 >UniRef50_A4FQC3 Diguanylate cyclase n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FQC3_SACEN Length = 284 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 30/186 (16%) Query: 284 DVKKLYSMYNSAF----LDDLTKAMGRKSFDEDLKAL----PEKGG-YLCLFDVDKFKNI 334 +VK+L + A D LT + R+ DE L L PE G + L D+D FK++ Sbjct: 86 EVKRLRREHAEAREQSRRDSLTASYNRRYLDERLADLVSDDPEADGLAVALVDLDWFKHV 145 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELL------SI 388 NDT+GHLLGD VL +VV +L+ +P R+GG+EF +++ T++ Sbjct: 146 NDTYGHLLGDRVLQRVVDLLQEVLPT-GAFCARYGGEEFVLVFP--TIDAAAAVAACEGA 202 Query: 389 LKEIVHFQVG----SINLSTSIGVAHSNEC--------PTVERLKMLADERLYKSKKNGR 436 I F G + ++ SIGVAH P+ E+ + AD LY +K++GR Sbjct: 203 RARIERFPWGQMAPGLRVTVSIGVAHEQHTTLGSDASPPSAEQQLISADALLYAAKQSGR 262 Query: 437 AQISWQ 442 ++++ Sbjct: 263 NAVAYR 268 >UniRef50_Q5DYR4 Two component response regulator, GGDEF domain protein n=3 Tax=Aliivibrio RepID=Q5DYR4_VIBF1 Length = 299 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 17/163 (10%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEKGGYL------CLFDVDKFKNINDTFGHLLGDEVLM 348 A LD LT + R+ FD DL+ + L +FD+D FK ND +GH GDEVL+ Sbjct: 133 ASLDGLTNLLNRRMFDFDLENRWAESQRLQANFSLIMFDIDHFKLYNDNYGHSAGDEVLV 192 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL---LSILKE------IVHFQVGS 399 +V K L + +VYR+GG+EF +I LE+L +L++ I H Sbjct: 193 RVAKALMKTLQRKTDRVYRYGGEEFILIQFDTDLEQLRQTAELLRQCIYDLNITHDFSFH 252 Query: 400 INLSTSIGVA--HSNECPTVERLKMLADERLYKSKKNGRAQIS 440 +S S+G ++ + + L + D++LYK+KK GR +S Sbjct: 253 KRISISVGATLINAEQIQPIPYLLEITDQQLYKAKKQGRNCVS 295 >UniRef50_C6B4A5 Diguanylate cyclase n=10 Tax=Rhizobiales RepID=C6B4A5_RHILS Length = 405 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 25/164 (15%) Query: 298 DDLTKAMGRKS--------FDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMK 349 D LT R+S + EDLK G + + D+D FK++ND GH GD L+K Sbjct: 233 DPLTGVANRRSMMETLHYFWSEDLKR--TSGAAMLMCDIDDFKHLNDNLGHAEGDRCLVK 290 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINL------- 402 V I++S + ++ +V R+GG+EF +++ G+ E+ ++ E + +V + +L Sbjct: 291 VAGIIQSSMRDERDQVARYGGEEF-LVFLPGSDEQEAKVVAERIRSRVEAASLPNPTSRV 349 Query: 403 ----STSIGVA---HSNECPTVERLKMLADERLYKSKKNGRAQI 439 + SIGVA +E + E ++ AD LY +KK GR ++ Sbjct: 350 VAYVTVSIGVATMMQDSELVSAEHMQRQADAALYLAKKTGRNRV 393 >UniRef50_Q3IKK3 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3IKK3_PSEHT Length = 962 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 16/154 (10%) Query: 298 DDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LT R++FD L A K + + D+D FK +ND + H++GD+V+ ++ Sbjct: 804 DQLTDMPNRRAFDSWLAANFATYKQQNKILAIAIMDIDHFKRVNDGWSHIVGDKVICEIA 863 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEE---LLSILKEIV---HFQV---GSINL 402 KILKS ++ +V R+GG+EF +++ T E + +L+E + F V G + Sbjct: 864 KILKSHCEGEQ-QVARWGGEEFTLVFPNKTAAEAKLMCELLREEIANNDFSVIAAGLHQV 922 Query: 403 STSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 + S GV+ SN +RL AD+ LYK+K GR Sbjct: 923 TASFGVSDSNNIDDYDRLLSGADQALYKAKNGGR 956 >UniRef50_Q1RHW0 Regulatory components of sensory transduction system n=15 Tax=Rickettsia RepID=Q1RHW0_RICBR Length = 457 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 17/168 (10%) Query: 288 LYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVDKFKNINDTFGHL 341 L N A D LT R+ FD +K + EK YL + D+D FK++NDT+GH Sbjct: 288 LEQSVNLAAKDGLTGLFNRRYFDVHIKQIVEKANKEGMKLYLLMCDIDNFKHVNDTYGHQ 347 Query: 342 LGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE------ELLSILKEIVHF 395 GD+VL+ +ILK+ V + RFGG+EF ++ ++ E + + E ++F Sbjct: 348 AGDKVLITTSRILKNTFRV-TDLIARFGGEEFTILLNDINIDQAIYTAERVRVKIESMNF 406 Query: 396 QVGS----INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 Q+ + + SIGV +C ++E +D+ +Y++K G+ ++ Sbjct: 407 QIDEQEKPLKKTVSIGVTEYKKCESIEEFIERSDKAMYEAKTTGKNKV 454 >UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Phytochrome (GAF) sensor n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YS99_9CYAN Length = 628 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 20/164 (12%) Query: 295 AFLDDLTKAMGRKSFD----EDLKALPEKGGYLCLF--DVDKFKNINDTFGHLLGDEVLM 348 A D LT R+ FD ++ L + G L L D+D FK NDT+GHL GD L Sbjct: 461 AMTDGLTLVANRRFFDKILSQEWNRLRREIGTLSLIICDIDYFKRYNDTYGHLAGDSCLK 520 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINL------ 402 KV ++L+ ++ V R+GG+EFA++ LE + ++ E++ +V ++ + Sbjct: 521 KVAQVLQEEVKRSGDLVARYGGEEFAILLPKTDLEGAI-LVSEVICSKVRALQITHEKSL 579 Query: 403 -----STSIGVAHS-NECPTVERLKML-ADERLYKSKKNGRAQI 439 + S+GVA + E P + + +L AD+ LY++KKNGR ++ Sbjct: 580 VAPYVTISVGVASTIPEPPLIPKTLILRADQALYEAKKNGRNRV 623 >UniRef50_Q03SW5 Signal transduction diguanylate cyclase n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03SW5_LACBA Length = 326 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 22/179 (12%) Query: 282 AADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNIN 335 AA + +L Y + F D+LT +F D + ++ L LFD+D FK +N Sbjct: 152 AATLARL--TYTTNF-DELTHVNNYFAFKNDFEEQFAHSRTTDQPLTLMLFDIDHFKQVN 208 Query: 336 DTFGHLLGDEVLMKVVKILKSQIPV--DKGKVYRFGGDEFAVIYTGGTLEELLSILKEI- 392 DT+GHL GD VL +++ Q+ D +YR GG+EF +++TG T E+ ++ I Sbjct: 209 DTYGHLAGDYVLSHTAQLVTKQLGELDDTLHLYRTGGEEFTILFTGYTTEQAAPLVHSIA 268 Query: 393 -----VHFQVG--SINLSTSIGVA--HSNECPTVERLKMLADERLYKSKKNGRAQISWQ 442 HF I++S S GV H+++ V+ AD LY SK+ GR +++ Q Sbjct: 269 QRVREAHFSHDGHQISISISAGVTQLHTDDDQRVDIFHR-ADRNLYHSKQTGRDRVTIQ 326 >UniRef50_A1AQ26 Diguanylate cyclase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQ26_PELPD Length = 341 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 31/182 (17%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLK----ALP-----------------EKGGYLC 324 + +++ + A D LT RK+FDE + LP +G ++ Sbjct: 138 RNFFAVLHEAQRDQLTGLANRKTFDEVVNKIYFQLPPSTDPVPVERRADSPSRSRGFWVG 197 Query: 325 LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG---- 380 + D+D FK IND++GHL GDEVL+ + ++++ + ++RFGG+EF +I Sbjct: 198 MADLDNFKRINDSWGHLYGDEVLLLISQLMQGHF-RESDYLFRFGGEEFVIIIRAAHEDQ 256 Query: 381 ---TLEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRA 437 E ++E + Q+G + + SIGVA + L AD+ LY +KKNGR Sbjct: 257 AEQAFERFRRAVEEHIFPQIGQVTI--SIGVAKMDASIFTATLLDHADKALYHAKKNGRN 314 Query: 438 QI 439 Q+ Sbjct: 315 QV 316 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75801 Uncharacterized membrane protein yliF n=57 Tax=E... 640 0.0 UniRef50_B7LP32 Putative enzyme with GGDEF domain n=1 Tax=Escher... 517 e-145 UniRef50_D1B3P8 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 245 2e-63 UniRef50_A8HV12 Putative uncharacterized protein n=1 Tax=Azorhiz... 230 1e-58 UniRef50_A8IL01 Putative diguanylate cyclase n=2 Tax=Azorhizobiu... 212 2e-53 UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthono... 203 1e-50 UniRef50_D0SE10 Diguanylate cyclase n=1 Tax=Acinetobacter johnso... 202 2e-50 UniRef50_C9NTP3 GGDEF domain protein n=1 Tax=Vibrio coralliilyti... 202 2e-50 UniRef50_C0QFG9 Signal transduction family protein (GGDEF domain... 198 4e-49 UniRef50_UPI0001AF5018 diguanylate cyclase, putative n=1 Tax=Pse... 198 4e-49 UniRef50_B8GTD8 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 198 5e-49 UniRef50_A8UY33 Putative uncharacterized protein n=1 Tax=Hydroge... 197 6e-49 UniRef50_Q4ZZT3 GGDEF n=5 Tax=Pseudomonas syringae group RepID=Q... 197 7e-49 UniRef50_Q31GI5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 197 7e-49 UniRef50_Q2BMX5 GGDEF family protein n=1 Tax=Neptuniibacter caes... 196 1e-48 UniRef50_A9FZW1 FHA domain protein n=1 Tax=Sorangium cellulosum ... 196 2e-48 UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=N... 195 3e-48 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 195 3e-48 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 195 4e-48 UniRef50_Q2W9B2 GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W9... 195 4e-48 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 195 4e-48 UniRef50_Q0G1R3 Periplasmic sensor diguanylate cyclase (GGDEF) n... 194 6e-48 UniRef50_C6CT46 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 194 6e-48 UniRef50_C8WUQ5 Diguanylate cyclase n=2 Tax=Alicyclobacillus aci... 194 6e-48 UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Breviba... 193 9e-48 UniRef50_A4BI17 Putative uncharacterized protein n=1 Tax=Reineke... 193 1e-47 UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum... 193 1e-47 UniRef50_A8FRI3 Putative diguanylate cyclase (GGDEF domain) n=1 ... 193 1e-47 UniRef50_Q1NSN0 GGDEF:GAF n=1 Tax=delta proteobacterium MLMS-1 R... 193 1e-47 UniRef50_A2SEJ2 Diguanylate cyclase n=1 Tax=Methylibium petrolei... 192 2e-47 UniRef50_A0KMP3 GGDEF domain protein n=2 Tax=Aeromonas RepID=A0K... 192 2e-47 UniRef50_B0TH60 Ggdef domain protein, putative n=1 Tax=Heliobact... 192 2e-47 UniRef50_Q47C21 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 192 2e-47 UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 192 2e-47 UniRef50_A4BD76 GGDEF domain protein n=1 Tax=Reinekea blandensis... 192 3e-47 UniRef50_D0I2V0 GGDEF family protein n=1 Tax=Grimontia hollisae ... 192 3e-47 UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax... 192 3e-47 UniRef50_A3WKY3 Putative uncharacterized protein n=1 Tax=Idiomar... 191 5e-47 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 191 5e-47 UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliob... 191 5e-47 UniRef50_Q8D4A5 FOG: GGDEF domain n=3 Tax=Vibrio vulnificus RepI... 191 6e-47 UniRef50_B7KF34 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7... 190 7e-47 UniRef50_C1XHK3 Diguanylate cyclase (GGDEF) domain-containing pr... 190 8e-47 UniRef50_A1TX96 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 190 1e-46 UniRef50_Q0EZJ8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Marip... 190 1e-46 UniRef50_Q21FP0 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 190 1e-46 UniRef50_A6WMZ7 Diguanylate cyclase n=3 Tax=Shewanella baltica R... 189 2e-46 UniRef50_D2C2R9 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 189 2e-46 UniRef50_Q1MZ89 Response regulator containing a CheY-like receiv... 189 2e-46 UniRef50_C1CWH3 Putative Diguanylate cyclase (GGDEF domain prote... 188 3e-46 UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7... 188 4e-46 UniRef50_Q1ZGY5 GGDEF domain protein n=1 Tax=Psychromonas sp. CN... 188 4e-46 UniRef50_Q2SME0 Response regulator containing a CheY-like receiv... 188 5e-46 UniRef50_Q1YM41 Conserved hypothetical membrane protein with GGD... 187 6e-46 UniRef50_B1HWA5 Putative diguanylate cyclase (GGDEF domain) n=2 ... 187 7e-46 UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii ... 187 8e-46 UniRef50_A6W118 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL... 187 8e-46 UniRef50_A6VTA2 Diguanylate cyclase n=2 Tax=Marinomonas RepID=A6... 187 8e-46 UniRef50_B8FL29 Response regulator receiver modulated diguanylat... 187 9e-46 UniRef50_UPI000185121C diguanylate cyclase n=1 Tax=Bacillus coah... 187 9e-46 UniRef50_B5XX83 Sensory box-containing diguanylate cyclase n=6 T... 187 1e-45 UniRef50_C5S8T8 Diguanylate cyclase n=1 Tax=Allochromatium vinos... 187 1e-45 UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 187 1e-45 UniRef50_A1SY47 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 187 1e-45 UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testostero... 187 1e-45 UniRef50_Q2W9E2 Predicted signal transduction protein n=2 Tax=Ma... 186 1e-45 UniRef50_Q2B6Y4 Putative uncharacterized protein n=1 Tax=Bacillu... 186 1e-45 UniRef50_A6Q2U9 Signal transduction response regulator n=1 Tax=N... 186 1e-45 UniRef50_C6P3N4 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 186 1e-45 UniRef50_A4G283 Putative uncharacterized protein n=1 Tax=Hermini... 186 1e-45 UniRef50_D0KW78 Diguanylate cyclase n=1 Tax=Halothiobacillus nea... 186 2e-45 UniRef50_C6D4J1 Diguanylate cyclase with GAF sensor n=2 Tax=Paen... 186 2e-45 UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (... 186 2e-45 UniRef50_Q1N3P2 Probable two-component response regulator n=1 Ta... 186 2e-45 UniRef50_A5UW82 Diguanylate cyclase n=2 Tax=Roseiflexus RepID=A5... 186 2e-45 UniRef50_Q7MRX3 Putative uncharacterized protein n=1 Tax=Wolinel... 186 2e-45 UniRef50_A8VQE2 Putative diguanylate cyclase n=1 Tax=Bacillus se... 186 2e-45 UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8F... 186 2e-45 UniRef50_P77302 Uncharacterized protein ydaM n=63 Tax=Enterobact... 185 2e-45 UniRef50_Q7MF60 GGDEF family protein n=69 Tax=Gammaproteobacteri... 185 2e-45 UniRef50_B4RU26 GGDEF protein n=2 Tax=Alteromonas macleodii RepI... 185 2e-45 UniRef50_B1HMB6 Sensory box/GGDEF family protein n=1 Tax=Lysinib... 185 2e-45 UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 185 2e-45 UniRef50_Q30RR7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 185 3e-45 UniRef50_Q1YJ80 GGDEF domain n=2 Tax=Aurantimonadaceae RepID=Q1Y... 185 3e-45 UniRef50_A8H9R4 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8H... 185 3e-45 UniRef50_C1SJT9 Diguanylate cyclase (GGDEF) domain-containing pr... 185 3e-45 UniRef50_UPI0001B9EDE1 diguanylate cyclase with PAS/PAC sensor n... 185 3e-45 UniRef50_A9WGU1 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 185 3e-45 UniRef50_C5B8C0 Putative uncharacterized protein n=2 Tax=Edwards... 185 4e-45 UniRef50_A8UWW7 Putative uncharacterized protein n=1 Tax=Hydroge... 185 4e-45 UniRef50_O66623 Putative uncharacterized protein n=1 Tax=Aquifex... 185 4e-45 UniRef50_Q2BLZ2 GGDEF protein n=1 Tax=Neptuniibacter caesariensi... 185 4e-45 UniRef50_Q12JJ7 GGDEF domain n=1 Tax=Shewanella denitrificans OS... 184 4e-45 UniRef50_C9PKI6 GGDEF domain protein n=1 Tax=Vibrio furnissii CI... 184 4e-45 UniRef50_A6Q5K7 Signal transduction response regulator n=1 Tax=N... 184 5e-45 UniRef50_Q7NT69 Probable Two component sensor n=1 Tax=Chromobact... 184 6e-45 UniRef50_D2R798 Diguanylate cyclase n=1 Tax=Pirellula staleyi DS... 184 6e-45 UniRef50_Q5LPK8 GGDEF domain protein n=1 Tax=Ruegeria pomeroyi R... 184 7e-45 UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepI... 184 7e-45 UniRef50_A4SQK1 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 184 7e-45 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 184 7e-45 Sequences not found previously or not previously below threshold: UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing pr... 203 8e-51 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 203 9e-51 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 198 2e-49 UniRef50_Q4KKJ4 Diguanylate cyclase, putative n=5 Tax=Pseudomona... 197 9e-49 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 195 2e-48 UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 195 2e-48 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 195 2e-48 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 195 4e-48 UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoe... 194 5e-48 UniRef50_C7HZA2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 193 1e-47 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 193 1e-47 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 193 1e-47 UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 192 2e-47 UniRef50_A1S9W6 Putative diguanylate cyclase (GGDEF domain prote... 192 2e-47 UniRef50_Q2BQL8 Probable two-component response regulator n=1 Ta... 192 2e-47 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 192 2e-47 UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax... 192 2e-47 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 192 2e-47 UniRef50_Q88RK0 GGDEF domain protein n=3 Tax=Pseudomonas putida ... 192 2e-47 UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 192 2e-47 UniRef50_D1SRS2 Diguanylate cyclase n=1 Tax=Acidovorax avenae su... 192 3e-47 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 192 3e-47 UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter sal... 192 3e-47 UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesi... 192 3e-47 UniRef50_Q21VE2 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 192 3e-47 UniRef50_Q2BQN9 Diguanylate cyclase, putative n=1 Tax=Neptuniiba... 191 4e-47 UniRef50_Q7M861 SIGNAL TRANSDUCTION RESPONSE REGULATOR-CheY like... 191 4e-47 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 191 4e-47 UniRef50_D2R258 Diguanylate cyclase and metal dependent phosphoh... 191 5e-47 UniRef50_Q2SK89 Response regulator containing a CheY-like receiv... 191 6e-47 UniRef50_B1JAS6 Diguanylate cyclase n=5 Tax=Pseudomonas RepID=B1... 190 7e-47 UniRef50_Q1NY46 GGDEF n=2 Tax=delta proteobacterium MLMS-1 RepID... 190 8e-47 UniRef50_B9ZP06 Diguanylate cyclase with PAS/PAC and GAF sensors... 190 8e-47 UniRef50_Q2T680 GGDEF domain protein n=32 Tax=Burkholderia RepID... 190 8e-47 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 190 9e-47 UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=... 190 9e-47 UniRef50_B1KK06 7TM domain sensor diguanylate cyclase n=1 Tax=Sh... 190 9e-47 UniRef50_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobac... 190 1e-46 UniRef50_B8J4U6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 190 1e-46 UniRef50_A6VEW2 Ggdef domain protein n=8 Tax=Pseudomonas RepID=A... 190 1e-46 UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nit... 190 1e-46 UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=... 190 1e-46 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 189 2e-46 UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 189 2e-46 UniRef50_C4RZH3 Putative uncharacterized protein n=4 Tax=Bacteri... 189 2e-46 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 189 2e-46 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 189 2e-46 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 189 2e-46 UniRef50_A1U2H0 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 188 2e-46 UniRef50_A4VQF4 GGDEF domain protein n=3 Tax=Proteobacteria RepI... 188 2e-46 UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n... 188 2e-46 UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 188 3e-46 UniRef50_A8TQW5 GGDEF domain n=1 Tax=alpha proteobacterium BAL19... 188 3e-46 UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms ... 188 3e-46 UniRef50_B1Y766 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii... 188 3e-46 UniRef50_Q3A5K1 Two component signal transduction response regul... 188 3e-46 UniRef50_C6NZP2 Periplasmic/7TM domain sensor diguanylate cyclas... 188 3e-46 UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with... 188 3e-46 UniRef50_Q21ED1 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 188 3e-46 UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 188 3e-46 UniRef50_D1U8T8 Response regulator receiver modulated diguanylat... 188 4e-46 UniRef50_A9D3L2 Putative uncharacterized protein n=1 Tax=Hoeflea... 188 4e-46 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 188 4e-46 UniRef50_Q1IV91 Diguanylate cyclase n=1 Tax=Candidatus Koribacte... 188 5e-46 UniRef50_A4VRS9 GGDEF domain protein n=2 Tax=Pseudomonas RepID=A... 188 5e-46 UniRef50_Q0ACB8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 188 5e-46 UniRef50_A0YZR1 Putative diguanylate cyclase (GGDEF domain) n=2 ... 188 5e-46 UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 188 5e-46 UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromob... 187 5e-46 UniRef50_C1XPT0 Diguanylate cyclase (GGDEF) domain-containing pr... 187 5e-46 UniRef50_Q2RNW0 Putative diguanylate cyclase (GGDEF domain) n=1 ... 187 5e-46 UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 187 6e-46 UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingo... 187 6e-46 UniRef50_Q2L341 Putative signaling protein n=3 Tax=Bordetella Re... 187 6e-46 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 187 6e-46 UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms R... 187 6e-46 UniRef50_A3VUD9 Putative uncharacterized protein n=1 Tax=Parvula... 187 6e-46 UniRef50_B0C190 Diguanylate cyclase (GGDEF) domain protein n=2 T... 187 7e-46 UniRef50_D2R0A0 Diguanylate cyclase n=1 Tax=Pirellula staleyi DS... 187 7e-46 UniRef50_B5VVN4 Response regulator receiver modulated diguanylat... 187 7e-46 UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curviba... 187 7e-46 UniRef50_C6BU46 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 187 7e-46 UniRef50_B3QH74 Diguanylate cyclase n=14 Tax=Bradyrhizobiaceae R... 187 8e-46 UniRef50_B5ZG65 Diguanylate cyclase with PAS/PAC sensor n=4 Tax=... 187 8e-46 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 187 9e-46 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 187 9e-46 UniRef50_A8FZW4 Sensory transduction system, regulatory protein ... 187 9e-46 UniRef50_D0J6P1 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 187 9e-46 UniRef50_C7HYK2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 187 9e-46 UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 T... 187 1e-45 UniRef50_B9Z5H6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 187 1e-45 UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobact... 187 1e-45 UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7Q... 187 1e-45 UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 186 1e-45 UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 186 1e-45 UniRef50_A1S6F8 Diguanylate cyclase n=2 Tax=Shewanella RepID=A1S... 186 1e-45 UniRef50_A6W0K6 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL... 186 1e-45 UniRef50_B2J0M5 Diguanylate cyclase with PAS/PAC and GAF sensors... 186 2e-45 UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4... 186 2e-45 UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus... 186 2e-45 UniRef50_B0RWR8 Diguanylate cyclase domain protein n=3 Tax=Xanth... 186 2e-45 UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobac... 186 2e-45 UniRef50_A3UJW0 Stalked-cell differentiation controlling protein... 186 2e-45 UniRef50_A8ZVJ7 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 186 2e-45 UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvest... 185 2e-45 UniRef50_Q2KVB5 Putative signaling protein n=1 Tax=Bordetella av... 185 2e-45 UniRef50_A3WIT1 Putative two-component hybrid sensor and regulat... 185 2e-45 UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clos... 185 2e-45 UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydroge... 185 2e-45 UniRef50_Q1K430 Diguanylate cyclase n=2 Tax=Desulfuromonas aceto... 185 2e-45 UniRef50_C5BK03 Ggdef domain protein n=1 Tax=Teredinibacter turn... 185 3e-45 UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 185 3e-45 UniRef50_A0LIF2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 185 3e-45 UniRef50_B8G8L1 Diguanylate cyclase n=1 Tax=Chloroflexus aggrega... 185 3e-45 UniRef50_C5UZW0 Diguanylate cyclase n=2 Tax=Gallionellaceae RepI... 185 3e-45 UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanoph... 185 3e-45 UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 185 3e-45 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 185 3e-45 UniRef50_Q2VZ27 Response regulator containing a CheY-like receiv... 185 3e-45 UniRef50_B9Z7N2 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 185 3e-45 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 185 3e-45 UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alterom... 185 3e-45 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 185 4e-45 UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix oren... 185 4e-45 UniRef50_Q2SHG3 Response regulator containing a CheY-like receiv... 185 4e-45 UniRef50_Q1K1C2 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 185 4e-45 UniRef50_C0ZHK6 Putative uncharacterized protein n=1 Tax=Breviba... 185 4e-45 UniRef50_C6CQG0 Diguanylate cyclase n=7 Tax=Enterobacteriaceae R... 185 4e-45 UniRef50_Q2IXE2 Response regulator receiver modulated diguanylat... 185 4e-45 UniRef50_C1XYG3 Diguanylate cyclase (GGDEF) domain-containing pr... 184 4e-45 UniRef50_A3QI98 Diguanylate cyclase n=1 Tax=Shewanella loihica P... 184 5e-45 UniRef50_C6MLU9 Response regulator receiver modulated diguanylat... 184 5e-45 UniRef50_B6BII0 GGDEF domain/pas/pac sensor domain protein n=1 T... 184 5e-45 UniRef50_B5W3I1 Diguanylate cyclase with PAS/PAC and GAF sensors... 184 5e-45 UniRef50_Q21GB7 Response regulator receiver modulated diguanylat... 184 5e-45 UniRef50_B7KCD2 Diguanylate cyclase with PAS/PAC and GAF sensors... 184 5e-45 UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 184 5e-45 UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein... 184 5e-45 UniRef50_B6BGM9 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 184 5e-45 UniRef50_Q1H488 Diguanylate cyclase n=1 Tax=Methylobacillus flag... 184 6e-45 UniRef50_A1AK83 Response regulator receiver modulated diguanylat... 184 6e-45 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 184 6e-45 UniRef50_UPI0001C385F5 signal transduction histidine kinase n=1 ... 184 6e-45 UniRef50_Q1YG68 GGDEF domain protein n=1 Tax=Aurantimonas mangan... 184 6e-45 UniRef50_A8GJ51 Diguanylate cyclase n=1 Tax=Serratia proteamacul... 184 6e-45 UniRef50_A3WLL9 Signaling protein with a acyltransferase and GGD... 184 7e-45 UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 184 7e-45 UniRef50_Q60BH3 GGDEF domain protein n=1 Tax=Methylococcus capsu... 184 7e-45 >UniRef50_P75801 Uncharacterized membrane protein yliF n=57 Tax=Enterobacteriaceae RepID=YLIF_ECOLI Length = 442 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 442/442 (100%), Positives = 442/442 (100%) Query: 1 MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVA 60 MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVA Sbjct: 1 MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVA 60 Query: 61 IDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQ 120 IDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQ Sbjct: 61 IDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQ 120 Query: 121 VVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSL 180 VVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSL Sbjct: 121 VVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSL 180 Query: 181 FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA 240 FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA Sbjct: 181 FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA 240 Query: 241 VISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL 300 VISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL Sbjct: 241 VISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL 300 Query: 301 TKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV 360 TKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV Sbjct: 301 TKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV 360 Query: 361 DKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERL 420 DKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERL Sbjct: 361 DKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERL 420 Query: 421 KMLADERLYKSKKNGRAQISWQ 442 KMLADERLYKSKKNGRAQISWQ Sbjct: 421 KMLADERLYKSKKNGRAQISWQ 442 >UniRef50_B7LP32 Putative enzyme with GGDEF domain n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LP32_ESCF3 Length = 503 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 187/436 (42%), Positives = 284/436 (65%), Gaps = 4/436 (0%) Query: 11 VSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVAIDLINTLNPT 70 +S+L F+ ISA+ C +YT+ VK ++ ++K +++D +VAN++EYRR+VA +L++ +N Sbjct: 68 ISVLCFVFISAITCTLYTENVKSKINAVKTAIVDNGLSVANVSEYRRAVATNLLDKINSN 127 Query: 71 EEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQVVKYRHVKNT 130 E L +R +YA+ +P YLYD+GP+ I++D CI + +YC +IM K + Sbjct: 128 PEDFLNHIRQSYAEQPAPGYLYDIGPFFINNDHCINITMKGGDYCKEIMTAFKVNNHHQI 187 Query: 131 GFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLF---KNGKPV 187 G I F GK + YY +PV + SLIF++ ER+ L K ++L SL+ N K + Sbjct: 188 GIIKFSGKGYAYYQHPVGYRMSLIFVVDPERYLSLMKLQTEKRQDLFISLYDINDNEKRI 247 Query: 188 TGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASC 247 GD++ ++IF +S + +Y+P +++ AYKK Y +C ++I +A++ + Sbjct: 248 AGDDFLISDSIFPMSASTRALSYVPDMMFIVAYKKSKYFAICFILIAISAVITWLIYHYH 307 Query: 248 LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRK 307 + L+ +++ RG +EKEAI++N F + +FFS +++ + +Y+ D LT+A R+ Sbjct: 308 VKLLSKILYRGQLEKEAILSNQFHEIRGENIFFSPSEINMIRDIYDFGAYDSLTRASVRR 367 Query: 308 SFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 FD D+ L E G+LCLFDVDKFK IND FGHL GDEVL+K+V ++K Q+P DKG VYR Sbjct: 368 IFDSDINDLSENFGFLCLFDVDKFKVINDKFGHLFGDEVLIKLVGLIKEQLPCDKGDVYR 427 Query: 368 FGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNEC-PTVERLKMLADE 426 FGGDEFA+IY L LL +L IV F++G +N S SIG+A + EC +ERLK++ADE Sbjct: 428 FGGDEFAIIYRDNDLNALLHMLSHIVRFRMGGLNCSCSIGIASTEECGNNIERLKVMADE 487 Query: 427 RLYKSKKNGRAQISWQ 442 RLYKSKKNGRAQI+WQ Sbjct: 488 RLYKSKKNGRAQITWQ 503 >UniRef50_D1B3P8 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B3P8_SULD5 Length = 405 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 89/340 (26%), Positives = 150/340 (44%), Gaps = 50/340 (14%) Query: 129 NTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKP-- 186 NT F GK F +++ P++ + L L+ L S +F L ++G Sbjct: 80 NTFFTHLSGKAF-WHIAPLSCAIGYLLLYALQERGLFS----------LFGLLRSGIALG 128 Query: 187 VTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGAS 246 + G Y N + + LPT L+ D + + + F LV+++ A Sbjct: 129 ILGISYYGLNHFSSNLHTALNTPLLPTFLHKITQASDFIFILSIIALLFIFLVSLLFEAQ 188 Query: 247 C----LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTK 302 +++ ++ +V +EA + L L +A V + Y A++D LT Sbjct: 189 TQKAPFWMLTSLMFSFLVMQEA--QSFILFSLLSALIAMSALV---HDAYKMAYIDTLTG 243 Query: 303 AMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDK 362 R++ +E L + + + D+D FK NDTFGH +GD+VL V K L + Sbjct: 244 IPSRRALEERFLRLGSR-YVIAMVDIDFFKKFNDTFGHDIGDDVLKLVAKELNHV--KNG 300 Query: 363 GKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--FQVGSI-------------------- 400 GK +R+GG+EF ++++G EE + L+E+ F+ G + Sbjct: 301 GKAFRYGGEEFTILFSGKKKEECIMALEEVREAIFRRGFVIRDKNRPAKSSKATKTNPSP 360 Query: 401 ---NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRA 437 LS SIGVA S + T + + AD+ LYK+K++GR Sbjct: 361 KKERLSVSIGVALSQKGKTPQEIIKKADDALYKAKESGRN 400 >UniRef50_A8HV12 Putative uncharacterized protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HV12_AZOC5 Length = 372 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 122/300 (40%), Gaps = 20/300 (6%) Query: 151 RSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAY 210 SL +L L R+ +++ +A L F+ + + ++T++ ++ Sbjct: 68 VSLFLMLALPRWHRMAEWIAY----LSFTTYCLVGVAAFGHLAEQTRLYTIANTLQWMPM 123 Query: 211 LPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHF 270 L ++ ++D + + + + + V AS YL RV+ ++ + H Sbjct: 124 LYVASFILLQRRDAVIAAALVFLSMSIPIVVEFSASDSYLKDRVLGSLVINAYLV---HL 180 Query: 271 ERVLDGGLFFSAAD-----VKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY--- 322 ++ LF + K ++ A D LT M R+ ++ L+ + Sbjct: 181 VILVSLSLFVMTSLAFEQARAKAKALETMASTDSLTGTMNRRGLEQILRHVAGGSSGEIG 240 Query: 323 LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL 382 L L D+D FK INDT+GHL GD VL V K L + D V R+GGDEF +I L Sbjct: 241 LILIDIDNFKPINDTYGHLAGDAVLQAVAKRLAGVVR-DSDVVGRWGGDEFLIITRDAQL 299 Query: 383 EELLSILKEIVHFQVGSI----NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 +++++ + ++ S GV + D LY +K GR + Sbjct: 300 TDVIAMADRARQHVGTHVLAGMRVTLSAGVGVWDGQGPWADALQRIDRALYSAKAEGRNR 359 >UniRef50_A8IL01 Putative diguanylate cyclase n=2 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IL01_AZOC5 Length = 549 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 80/350 (22%), Positives = 131/350 (37%), Gaps = 74/350 (21%) Query: 113 NYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMD 172 NY D+ + + DG+ + + TH+ LL+ S+ Sbjct: 227 NYFRDLFSRINMGRAGEIALVRSDGRLVMRWPSGDTHD-------------LLNASI--- 270 Query: 173 SENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYV----FAYKKDVYLRV 228 S + +F G + + + + H+ Y P G + + D L + Sbjct: 271 SRSGLFRHIAEGPSGSFTTSDGTDGV------ERHYLYAPVGRFPLTLVVGFSVDEVLGL 324 Query: 229 CTL-IIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKK 287 + F + VI+GA L ++ +G + +E ++ FE Sbjct: 325 WRRQALTFGLIGCVIAGAIVLLVLA---LQGALRREEKMSARFE---------------- 365 Query: 288 LYSMYNSAFLDDLTKAMGRKSFDEDL------KALPEKGGYLCLFDVDKFKNINDTFGHL 341 N A D LT R+SFDE L A L + DVD+FK +ND FGH Sbjct: 366 -----NLATTDWLTGLPNRRSFDERLIAAARSTARSAAPLALLMIDVDRFKVLNDRFGHG 420 Query: 342 LGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT----LEELLSILKEIVH-FQ 396 GDEVL ++ ++LK+ V R+GG+EFA + G ++ + H F Sbjct: 421 RGDEVLRQISQVLKACARRPDDMVARYGGEEFAAVLPGTDAAGAARVAEAMRAAVEHAFP 480 Query: 397 VGSINLSTSIGVAHSNECPTVER-------LKMLADERLYKSKKNGRAQI 439 + ++ SIG A P E L Y++K GR ++ Sbjct: 481 SPDMTVTVSIGAASGTLAPETETRTLLAAADAAL-----YEAKAQGRNRV 525 >UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XLF8_MEIRU Length = 373 Score = 203 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 20/250 (8%) Query: 201 VSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIV 260 ++ A F + + ++ LV + + L+ IN + Sbjct: 113 ITPAALWFPMVYLMAFNLLNRRQALR------FSLVYLVLGLLAGAVGMLMSPSINVSSI 166 Query: 261 EKEAIINNHFERVLDGGLFFSAADVKKLY-SMYNSAFLDDLTKAMGRKSFDEDLK----- 314 + F + L + A +++ Y M+ A D LT R++ + L+ Sbjct: 167 NTA--LQFTFSNIAYLALLYMFAYLRRHYAQMHQMAHTDALTNLTNRRAMQQKLEGELDR 224 Query: 315 -ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEF 373 + L L D+D FK INDT+GH +GD+VL +V L + + + R+GG+EF Sbjct: 225 ARRYNRPFALLLADLDHFKQINDTYGHSVGDQVLREVAGRLAQHLR-ESDSLARWGGEEF 283 Query: 374 AVIYTGGTLEELLSILKE----IVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLY 429 ++ L++ + + I + + ++ S+GVA + ++ L ADE +Y Sbjct: 284 LILAPETDLQQAYLLAQRLLGAIRESPISGVQVTLSLGVACYRQGDSIAALLSRADEAMY 343 Query: 430 KSKKNGRAQI 439 ++K GR QI Sbjct: 344 RAKAGGRNQI 353 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 86/443 (19%), Positives = 168/443 (37%), Gaps = 59/443 (13%) Query: 17 IMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVAIDLINTLNPTEEQLLV 76 +M+ A+ Y + ++ +L Q + V + + +I + T++P E Q Sbjct: 260 LMLEALPNPTYLINRERQIIALNQVAKERGAVVGDYCWH----SIHHLKTISPVERQFFE 315 Query: 77 GLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFD 136 P Y +DE + K+ E C ++ D Sbjct: 316 N-----TGKPLPG----TKCYFCRADEALNRKQKEN--CE----------------VNLD 348 Query: 137 GKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKN 196 G + + P+ N L +++ + ++ + + + E F G Sbjct: 349 GLFWNIWWVPIDENTYLHYVIDVTKYKKMEEEIREQKE---FLRLILDSMPAGVMVVDAK 405 Query: 197 AIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASC-LYLVRRVI 255 + +E A + K C I + + +I+ + R++ Sbjct: 406 TFRIENVNLEAAAMIGASPEEIIGKS------CFEIFPESKGLCLITAVGQEMDWAERIL 459 Query: 256 NRGIVEKEAIINNHFERVLDGG-----LFFSAADVKKLYS-MYNSAFLDDLTKAMGRKSF 309 +R + ++ G F + KKL +Y + D LT+A R+ F Sbjct: 460 HRMDGSQLPVLKIVKRLRTKSGEKLIETFIDLTERKKLEEQLYRLSITDYLTQAYNRRYF 519 Query: 310 DEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKG 363 E L+ E+ L + D+D FKN+ND FGH GD VL + ++K++I Sbjct: 520 TEMLEREIERAKRTKMPFALIMLDIDHFKNVNDRFGHAAGDLVLKTLANLIKNRIR-QTD 578 Query: 364 KVYRFGGDEFAVIYTGGTLEELLSILKEIVH----FQVGSI-NLSTSIGVAHSNECPTVE 418 + R+GG+EF ++ +E+ + +E+ ++ + ++ S GV T++ Sbjct: 579 CLARWGGEEFVILLPNTPVEKAAGLAEELREQLSMLEIPGVGRVTASFGVTGYCPGDTLD 638 Query: 419 RLKMLADERLYKSKKNGRAQISW 441 L M AD+ LY +K +GR + + Sbjct: 639 TLLMRADQMLYTAKASGRNCVRF 661 >UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VK28_9CYAN Length = 331 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 24/207 (11%) Query: 251 VRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFD 310 VRR+++ V E ERVL L ++++L + D LT+ R++FD Sbjct: 124 VRRLLHTHWVMAELHRKIEQERVLKAKLEEMNQELQRLVDL------DGLTQIANRRAFD 177 Query: 311 EDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGK 364 + L+ ++ L L D+D FK NDT+GH GDE L +V IL+ Sbjct: 178 QALQQEWKRLAREQAPLSLILCDIDFFKAYNDTYGHQAGDECLKQVADILRKAAKRPADV 237 Query: 365 VYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSIN--LSTSIGVA--HSN 412 V R+GG+EF VI +L + + + I + + ++ ++ S GVA Sbjct: 238 VARYGGEEFVVILPNTSLRGAMQVAESIRSKLKSRAIVHEGSGVSKFVTLSCGVAGVIPP 297 Query: 413 ECPTVERLKMLADERLYKSKKNGRAQI 439 T +RL AD+ LYK+K GR ++ Sbjct: 298 PKTTPDRLIAEADQALYKAKVEGRDRV 324 >UniRef50_D0SE10 Diguanylate cyclase n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SE10_ACIJO Length = 389 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 74/292 (25%), Positives = 136/292 (46%), Gaps = 43/292 (14%) Query: 161 RFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAY 220 R +L+ S+A+ ++FS+FK+ Y + + + + F+YL LY Sbjct: 121 RMLILNISIALVESLVLFSMFKH--------YQGIDLLNKIVD----FSYLFIVLYT--- 165 Query: 221 KKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFF 280 ++R + +F + A + S +L+ ++ I++ F VL G L Sbjct: 166 ----FVRGIIIFLFLRNIEADMLANSVWWLM-------MLAASIILSMWFAIVLLGTLVR 214 Query: 281 SAADVKKLYSMYNSAFLDDLTKAMGRKSFDE----DLKALPEKGGYLCLFDVDKFKNIND 336 ++ + + D LT ++ F+E L L ++ +L + D+D FK IND Sbjct: 215 DI-----IHQLNDERLRDPLTHLFNQRGFNEAAKRKLHQLSKQPYFLLMCDIDHFKKIND 269 Query: 337 TFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--- 393 T+GHL+GD++L +VV+I+ + V RFGG+EF V+ +I I Sbjct: 270 TYGHLVGDQILQQVVEIIGQNVRT-HDLVGRFGGEEFIVLLQIDDPTLAYNIANRIRLGI 328 Query: 394 ---HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISWQ 442 +I ++ S G+A ++ P ++ AD+ LY++K +GR QI ++ Sbjct: 329 ADARLSSKNIAVTASFGLAAVHQ-PNLKYAIHDADQLLYQAKHSGRNQIGFE 379 >UniRef50_C9NTP3 GGDEF domain protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NTP3_9VIBR Length = 603 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 74/299 (24%), Positives = 128/299 (42%), Gaps = 29/299 (9%) Query: 163 SLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKK 222 L+++ + ++ +N + S+ N P D N + VS ME + L + + Sbjct: 309 MLINQPIELNIQNHLISV-DNTHPSIPDNQKGINLVVYVS--MEELK--SSNLLLM---R 360 Query: 223 DVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLD--GGLFF 280 +V+L +C + FA+L +S +V ++ K F D G LF Sbjct: 361 EVFLYLCIALFLFASLTLYLSHYIASPIVDLRRRISVLSKTGRAKTDFSVRDDEIGQLFS 420 Query: 281 SAADV-----KKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE--KGGYLCLFDVDKFKN 333 + +D+ K + D LT + R++ + + +C+ D+D FK Sbjct: 421 AFSDMAYSIKTKESQLVKLVREDPLTGILNRRALVNHAEDIRRLNASSCICMMDLDHFKQ 480 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 IND +GH +GD VL ++ S+I D R GG+EFA+I LE+ S+ + I Sbjct: 481 INDNYGHAIGDSVLKTFCTLVMSEIR-DTDIFGRLGGEEFALILPETQLEDAASLAERIR 539 Query: 394 HFQVGSI----------NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISWQ 442 + ++ SIGV + + AD++LY +K++GR QI Q Sbjct: 540 SRVELQLVASLRSVVCSKVTVSIGVVEWLD-DDFAKALSSADKQLYMAKESGRNQIKVQ 597 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 17/201 (8%) Query: 255 INRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDE--- 311 +N G + AI+ F +L A + + A +D LT R++FDE Sbjct: 186 MNAGWLSALAIVAGEFLVILSSFCTIWMASDELQDELSEIARIDPLTGLYNRRAFDECCD 245 Query: 312 -DLKALPEKG--GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRF 368 + G + + D+D FK +ND +GH +GDEVL + LK I V RF Sbjct: 246 IEFSRAQRSGAPFAIIMCDLDHFKRVNDRYGHHVGDEVLRRFANTLKEHIR-KHDVVARF 304 Query: 369 GGDEFAVIYTGGTLEELLSILKEIVHFQVGS---------INLSTSIGVAHSNECP-TVE 418 GG+EF ++ G E+ L + +++ + + LS S GVAH + Sbjct: 305 GGEEFVLLLPGKDTEQGLEVAEKLRAKTADTQITIGDDVCLTLSASFGVAHYDSSDREWS 364 Query: 419 RLKMLADERLYKSKKNGRAQI 439 + AD LY +KK GR ++ Sbjct: 365 AVLHRADNALYAAKKQGRNRV 385 >UniRef50_C0QFG9 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFG9_DESAH Length = 339 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 17/221 (7%) Query: 235 FAALVAVISGASCLYLVRRVINRGIVEKEAIINN--HFERVLDGGLFFSAADVKKLYSMY 292 ALV + + + R +++ I E +A++ F+ + A+ KKL Sbjct: 114 LQALVRELEEDEDMDSLARTMDKIIQEAKALVQTGKSFQGRMASSSQELASLRKKLDVSK 173 Query: 293 NSAFLDDLTKAMGRKSFDEDLKALPEKGGY---LCLFDVDKFKNINDTFGHLLGDEVLMK 349 A D LT + R+ F+ L L + L + D+D FK +NDT+GHL+GD +L Sbjct: 174 KDAETDALTGLLNRRGFESRLHPLLKDPQSCFCLIMIDIDHFKRVNDTYGHLVGDSILKA 233 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS---------- 399 + +LK Q K + RFGG+EF ++ LE+ ++ ++I Sbjct: 234 LANLLKQQ-TKGKDCLARFGGEEFIILLPETRLEQAGAVAEDIRKKLAAQEWKQRKTGKP 292 Query: 400 -INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ S+GV + L D LY +K+NGR ++ Sbjct: 293 MGKITISLGVTQYRPNESEVTLIHRVDTALYTAKRNGRNRV 333 >UniRef50_UPI0001AF5018 diguanylate cyclase, putative n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF5018 Length = 692 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 15/168 (8%) Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGH 340 L A +D LT R ++ E L+ + +C+ D+D FK IND +GH Sbjct: 524 NLEEQRQKALIDPLTGLANRAAWGERLELEMTQWQQAKNSLLVCILDLDHFKRINDGYGH 583 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT-------LEELLSILKE-I 392 L GD+VL V +LK ++ + RFGG+EF ++ L+EL + ++E Sbjct: 584 LAGDKVLKIVANVLKKRLR-PNDFMARFGGEEFVMLLPATPIGTGLTLLDELRTAVEECP 642 Query: 393 VHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 HF+ + ++ S+GV + + AD+ LYK+K+NGR ++ Sbjct: 643 FHFKGERVTITVSLGVTALRQGERSDTAIKRADQALYKAKENGRNRVE 690 >UniRef50_B8GTD8 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTD8_THISH Length = 451 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 15/161 (9%) Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDE 345 A +D LT R++FDE L + L ++DVD+FK IND++GH GD+ Sbjct: 288 RKQALIDQLTGVPNRQAFDERLAQEYSRWKRFNTPLALIMWDVDRFKLINDSYGHKAGDK 347 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQV 397 V+ V + LK +I + V R+GG+EF ++ TG + ++ L+I ++I HF+ Sbjct: 348 VIRAVAQKLKERIR-ETDMVARYGGEEFVMLLTGASGQDALAIAEKIRAEIAGLGFHFRG 406 Query: 398 GSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 + ++ S G+A E T E AD LY++K GR + Sbjct: 407 ERVPITISAGIALFAEGDTPETAFDNADRALYEAKNTGRNR 447 >UniRef50_A8UY33 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY33_9AQUI Length = 345 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 102/206 (49%), Gaps = 18/206 (8%) Query: 251 VRRVINRGIVEKEAI--INNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKS 308 V++V+NR + E + +N F + L+ ++L + A +D LT R+S Sbjct: 139 VQKVLNRIMHEVRGLKSVNRKFIQRLEEQRGEIERLREELRRVKEEANIDPLTGLRNRRS 198 Query: 309 FDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDK 362 F+ L + + D+D FK INDT+GHL GD+VL ++ IL++ + K Sbjct: 199 FERALSEFFRDFKKFGYPFSVIMIDLDNFKQINDTYGHLAGDKVLKEIGNILRNYLRA-K 257 Query: 363 GKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIGVAHSNEC 414 R GG+EF +I G T EE L + + + V + IN + S GVA NE Sbjct: 258 DVPARTGGEEFTIILPGITREEALMVAERLRKVIANYTVEHEDKKINPTASFGVAEVNEQ 317 Query: 415 -PTVERLKMLADERLYKSKKNGRAQI 439 T E L LADE LYK+K+ G+ + Sbjct: 318 VETPEDLLRLADENLYKAKRRGKNTV 343 >UniRef50_Q4ZZT3 GGDEF n=5 Tax=Pseudomonas syringae group RepID=Q4ZZT3_PSEU2 Length = 690 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 15/167 (8%) Query: 288 LYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGHL 341 L A +D LT R ++ E L+ + +C+ D+D FK IND +GHL Sbjct: 523 LEEQRQKALIDPLTGLPNRAAWGERLEREMARWHEEKNSLLVCILDLDHFKRINDGYGHL 582 Query: 342 LGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV-------- 393 GD+VL V +L ++ D + RFGG+EF ++ L +L E+ Sbjct: 583 AGDKVLKIVANVLSKRLRAD-DFMARFGGEEFVMLLPATPPATGLKLLDELRAAVESCPF 641 Query: 394 HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 HF+ + ++ SIG+ + AD+ LYK+K+NGR +I Sbjct: 642 HFKGERVTITVSIGMTAFRPSERSDTAIKRADQALYKAKENGRNRIE 688 >UniRef50_Q31GI5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GI5_THICR Length = 532 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 11/199 (5%) Query: 252 RRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGR----K 307 ++I ++ I + FF +++ ++ A D+LT R + Sbjct: 329 IKLITENFLQHLLINEFLLLIISLLVFFFIRNQIRQRRLLHKMAKTDNLTGLPNRSIFKR 388 Query: 308 SFDEDLKALPEK--GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKV 365 + +E++K +K L FD+D FK INDT+GHL+GD+VL KV + ++ + K Sbjct: 389 ALNENIKRSNKKQWPLSLIFFDIDHFKKINDTYGHLVGDKVLKKVARNIEDGL-THKDIF 447 Query: 366 YRFGGDEFAVIYTGGTLEELLSILKEIVH----FQVGSINLSTSIGVAHSNECPTVERLK 421 R+GG+EF ++ L++ + + + I +++S GV+ T E Sbjct: 448 ARWGGEEFVILLPNTDLQDAEKVAERLRQKLEAMTDFDITITSSFGVSDLRPDDTAESFM 507 Query: 422 MLADERLYKSKKNGRAQIS 440 DE LY+SK+ GR +++ Sbjct: 508 QRGDEMLYRSKEQGRNRVT 526 >UniRef50_Q4KKJ4 Diguanylate cyclase, putative n=5 Tax=Pseudomonas fluorescens RepID=Q4KKJ4_PSEF5 Length = 727 Score = 197 bits (500), Expect = 9e-49, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 15/175 (8%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKN 333 + + L A +D LT R ++ E L+ + L + D+D FK Sbjct: 552 EAQGYREHLEEQRQKALIDPLTGLPNRAAWSERLEHEVGQWQQHGNSLLLAMLDLDHFKR 611 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT-------LEELL 386 IND +GHL GD+VL + +L+ ++ + RFGG+EF ++ +E L Sbjct: 612 INDNYGHLAGDKVLKIIANVLRKRLR-GSDFIARFGGEEFVLLLPNTPWPVGVRIVEALR 670 Query: 387 SILKE-IVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + ++ HF+ + ++ S+G++ + + AD+ LY++K GR ++ Sbjct: 671 AAIEACPFHFKGEPVTITVSVGLSAFKAGDRSDLVIKRADQALYRAKDAGRNRVE 725 >UniRef50_Q2BMX5 GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMX5_9GAMM Length = 344 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 61/186 (32%), Positives = 95/186 (51%), Gaps = 17/186 (9%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL-----PEKGGYLC 324 F+ ++ + ++L A +D LT R++FD +L + E L Sbjct: 154 FQERMEQAQAEIESLKEELNKTRQDARVDPLTNLFNRRAFDAELAQVVGLNGSEFTSSLV 213 Query: 325 LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEE 384 L D+D FK NDT+GHL+GD+VL V K+LK I ++ RFGG+EFAV+ G + E+ Sbjct: 214 LVDIDHFKKFNDTYGHLMGDKVLQYVGKLLKD-ICLEPMLPVRFGGEEFAVLMPGTSKEQ 272 Query: 385 LLSILK---------EIVHFQVGSI--NLSTSIGVAHSNECPTVERLKMLADERLYKSKK 433 I + I + G I +++ S GV+ + TVE+L D+ LY++K Sbjct: 273 AFEIAEKVRLKIQAIRIKQKKSGDIISSITASFGVSQLTDAETVEQLIERTDQALYQAKN 332 Query: 434 NGRAQI 439 NGR Q+ Sbjct: 333 NGRNQV 338 >UniRef50_A9FZW1 FHA domain protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FZW1_SORC5 Length = 299 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 62/178 (34%), Positives = 93/178 (52%), Gaps = 18/178 (10%) Query: 279 FFSAADVKKLY--SMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDK 330 F S ADV+ Y +Y +D LT+ ++ E L+ E+ + LFD+D Sbjct: 121 FLSGADVEAQYHEEIYRMTIIDGLTQIHNKRYLYEALEREIIRGRRHERDLAILLFDIDH 180 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL----- 385 FK IND GHL GD VL +V +I++S+I D+ R+GG+EFA+I ++E Sbjct: 181 FKRINDVHGHLAGDFVLKEVARIVQSRIRRDE-VFARYGGEEFAIILPETSIEGAAALGE 239 Query: 386 ---LSILKEIVHFQVGSINLSTSIGVAHSNECP-TVERLKMLADERLYKSKKNGRAQI 439 + + + FQ SI ++ S+GVA E T L ADERLY +K +GR ++ Sbjct: 240 TLRQKVAEHLFVFQADSIRVTISVGVALLQEGDRTANDLIKRADERLYHAKNSGRNRV 297 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 15/188 (7%) Query: 265 IINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK----- 319 +I + VL + + + ++L M A D LT R+ F E + E+ Sbjct: 103 VIKPYSLSVLLARVRSALREKERLDLMEKWATTDPLTGLYNRRFFFEQAQRELERVQRNE 162 Query: 320 -GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT 378 + D+D FK +ND +GHL+GD+VL + K+ K RFGG+EF + Sbjct: 163 TDASFIILDIDHFKKVNDEYGHLVGDDVLEGLAKLFKETFRKV-DLCCRFGGEEFVICLP 221 Query: 379 GGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYK 430 E L + + + + G ++++ S+GV+ +NE T+E + AD+ LY+ Sbjct: 222 DTDTEGALLVAERTRKKVEELSFNTEKGPLHVTISLGVSSANENTTLEDMLKRADDALYQ 281 Query: 431 SKKNGRAQ 438 +K+NGR + Sbjct: 282 AKQNGRNR 289 >UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTU2_DESBD Length = 339 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 23/228 (10%) Query: 233 IFFAALVAVISGASCLYLV---RRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKL- 288 +F LV V A + + R + R +V + A++ H L+ + ++++ Sbjct: 106 LFETLLVPVKDEAGTITHIWGMARDLTRFLVSQNALV--HLNEQLEAKILQRTRELEEAN 163 Query: 289 YSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVDKFKNINDTFGHLL 342 + + + D LT R+ FD L + L + D+D FK ND +GH Sbjct: 164 HRLSELSLTDGLTGIANRRRFDAALAEEWSRSARTGSTLALIMLDIDHFKKYNDHYGHQQ 223 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------- 393 GD+ L +V ++L+S V R+GG+EF +I L I + + Sbjct: 224 GDDCLRRVAEVLRSSARRQGDLVSRYGGEEFCMILPDTALPGAFEIAERLRREVENMDMP 283 Query: 394 HFQVGSINLSTSIGVAHSNECP--TVERLKMLADERLYKSKKNGRAQI 439 H ++ S+GVA S C + L ADE LY++K GR + Sbjct: 284 HVLSDVGRVTASMGVAASMPCKAMSPAELLRRADESLYQAKSEGRNCV 331 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 17/193 (8%) Query: 266 INNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEK 319 + + + S +++ ++ + D LT R+ +E + Sbjct: 354 LARPLAQRFAERVALSLVNLRLRATLRQQSIRDPLTGLYNRRYLEETFTRELARVQRRRQ 413 Query: 320 GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTG 379 L + DVD FK NDT+GH LGD +L ++ L+ + V R+GG+EF V+ Sbjct: 414 PLSLLMIDVDHFKQHNDTYGHALGDTLLRRLATHLQRFFRTE-DIVCRYGGEEFVVLLPE 472 Query: 380 GTLEELLSILKEIVHF---------QVGSINLSTSIGVAH-SNECPTVERLKMLADERLY 429 + + + + + L+ SIG A + T E L AD LY Sbjct: 473 CDAPQAQARAEALRRSVENLAVTSNDAEFVALTISIGGASWPDHATTPEDLLARADAALY 532 Query: 430 KSKKNGRAQISWQ 442 ++K GR ++ ++ Sbjct: 533 RAKHRGRNRVEFE 545 >UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q525_NITSB Length = 350 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 18/209 (8%) Query: 246 SCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMG 305 L ++ ++ +E+ + N+ L ++L N A D LT+ Sbjct: 142 EILKYLKEILQN--LEELRMENSQLNEQLKKYYEEINHLRRELRDTKNKAEFDYLTELFN 199 Query: 306 RKSFDEDLKALPE-------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQI 358 R+ F+E L + K L + D+D FK INDT+GHLLGDEVL + ++K+ + Sbjct: 200 RRKFEEYFHKLLKEFNEGEGKPFSLIILDIDDFKQINDTYGHLLGDEVLKNLSSLIKTFL 259 Query: 359 PVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSINLSTSIGVAH 410 R GG+EFA++ L+E +I + + G +N + SIGVA Sbjct: 260 HSAH-IPARIGGEEFAILLPETPLDEAKTIAERLRKTVENRTIPIAEGDLNFTVSIGVAQ 318 Query: 411 SNECPTVERLKMLADERLYKSKKNGRAQI 439 + T++ L ADE LY++K+NG+ + Sbjct: 319 VQKGDTMDSLLKRADEALYEAKRNGKNMV 347 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 15/179 (8%) Query: 276 GGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVD 329 G + + + + A D LT R+ F E L+ ++ L DVD Sbjct: 531 GIITDTTEHREAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVD 590 Query: 330 KFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSIL 389 +FK +NDT+GH +GDEVL + I ++++ D V R GG+EFAV+ EE +++ Sbjct: 591 RFKRVNDTWGHAVGDEVLRALAGICRAEVR-DVDTVGRIGGEEFAVLLPDTAPEEAMAVA 649 Query: 390 KEIVH--------FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + + G + ++ S+GV+ S C + L AD LY++K GR ++ Sbjct: 650 ERLRAGVEAAPLLTTAGPLTVTLSLGVSASPPCDGADTLLREADRALYRAKAGGRNRVE 708 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 15/188 (7%) Query: 265 IINNHFERVLDGGLFFSAADVKKLYSMY-NSAFLDDLTKAMGRKSFDEDLKA------LP 317 I + + + F K+L M + D LT R+ + L+ Sbjct: 584 FIKDVENKPVAVFTFVDITKEKELSDMLLKQSTEDPLTGIYNRRYLENKLEEYVKLAKRH 643 Query: 318 EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIY 377 ++ L +FD+D FK+IND+FGH +GD+VL + K++ I + R+GG+EF +I Sbjct: 644 DRPLSLIMFDIDFFKHINDSFGHDVGDKVLKAIAKVVSENIR-NTDIFARYGGEEFVIIA 702 Query: 378 TGGTLEELLSILKEIV------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKS 431 T E+ + +++ HF+ G IN++ S GVA + T E L ADE LY++ Sbjct: 703 PETTKEDAKILAEKLRSLIRNLHFEEG-INVTCSFGVASLEKHDTKETLLKRADEALYEA 761 Query: 432 KKNGRAQI 439 KK GR ++ Sbjct: 762 KKTGRNKV 769 >UniRef50_Q2W9B2 GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W9B2_MAGSA Length = 352 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 90/194 (46%), Gaps = 18/194 (9%) Query: 263 EAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK------AL 316 A +N E+ L+ A L + A D LT+ RK FD L Sbjct: 145 MADLNRQLEQRLENSSNEVARLRNHLDDLKREASTDALTQLANRKLFDHSLNLAVLDARA 204 Query: 317 PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVI 376 + L + D+D FK NDT+GH LGD+VL V + L S++ K R+GG+EFAVI Sbjct: 205 ADAPLSLLMIDIDHFKQFNDTYGHQLGDQVLKLVARSL-SEVAQAKDTAARYGGEEFAVI 263 Query: 377 YTGGTLEELLSILKEIVHF---------QVGSI--NLSTSIGVAHSNECPTVERLKMLAD 425 LE+ + + + I + + G + ++ SIG A E + L AD Sbjct: 264 LPATPLEKSMEVAETIRNQVSTKRLTNRRTGQVLGQVTLSIGAALLREAEAPDSLVHRAD 323 Query: 426 ERLYKSKKNGRAQI 439 E +Y +K++GR ++ Sbjct: 324 EAMYLAKRDGRNRV 337 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 16/251 (6%) Query: 202 SEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVE 261 S + LP YVF + + + F A + +I + Sbjct: 747 SMTTSEYTSLPANDYVFQVRAAYPGGAWSDPVSF-AFTRSEHPWQQSWFWLSIIFALGLA 805 Query: 262 KEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK------A 315 ++ + + +K + A D LT+ R++FDE L+ Sbjct: 806 ATILVRARIRFLNNQRAQLELMVAEKTKELKGLARQDSLTQLGNRRAFDEQLQYEFKRCE 865 Query: 316 LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAV 375 E+ L + DVD FK+IND F H++GD+VL+++ +L + + D + R+GG+EFA+ Sbjct: 866 RSEQPLSLAIIDVDHFKSINDRFLHVIGDQVLIELSALLSNMLR-DIDYIARWGGEEFAL 924 Query: 376 IYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVERLKMLADER 427 + T +E L + I + ++ SIGVA S P L + AD+ Sbjct: 925 LMPETTAKEALQAAERIRQRIEDTSYQHLADELAVTVSIGVASSEHYPNHSALLVAADKA 984 Query: 428 LYKSKKNGRAQ 438 LYK+K++GR + Sbjct: 985 LYKAKQSGRNR 995 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 13/175 (7%) Query: 277 GLFFSAADVKKLYS-MYNSAFLDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVD 329 +F K+L + + + AF D LT A R F+ L + L L D+D Sbjct: 613 AMFHDITRQKELEAALEHQAFYDPLTDAANRGYFETLLDQEARRAQRYAHPCSLLLLDID 672 Query: 330 KFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSIL 389 FK INDTFGH +GDEVL +V LK ++ + + R+GG+EF V+ G E + Sbjct: 673 HFKRINDTFGHEVGDEVLRFLVHALKGRLR-EADVLGRWGGEEFVVLLPGTDAERGQHVA 731 Query: 390 KEIVHFQVGSIN-----LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 +++ + ++ S+GVA ++ ADE +Y +KK GR ++ Sbjct: 732 EQLREQVTATAFPCVGLVTISLGVAECRPGESIRDWVKRADEAMYVAKKGGRNRV 786 >UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9C4_9DELT Length = 498 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 84/201 (41%), Gaps = 25/201 (12%) Query: 255 INRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL- 313 + R VE NH L L F ++ A D LT+ R SFDE L Sbjct: 293 LGRDQVETFRSAVNHLGLALRNALIFKEVKLR--------ADRDGLTRIYNRHSFDERLI 344 Query: 314 -----KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRF 368 + L + D+D FK +NDT+GH GD VL KV +IL R+ Sbjct: 345 YEIKRRRRYNHDLSLLMVDLDHFKQVNDTYGHKAGDMVLRKVGEILTETFRT-TDLAARY 403 Query: 369 GGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTV--E 418 GG+EF V+ + E + + I F +++ SIGVA + Sbjct: 404 GGEEFVVLLPHTSEEAAWKLAERIRESIQGCVFRFDGHEFSVTASIGVASVEAGALTRDD 463 Query: 419 RLKMLADERLYKSKKNGRAQI 439 L + AD+ LYK+K NGR + Sbjct: 464 DLLIKADKALYKAKNNGRNMV 484 >UniRef50_Q0G1R3 Periplasmic sensor diguanylate cyclase (GGDEF) n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G1R3_9RHIZ Length = 442 Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats. Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 12/161 (7%) Query: 291 MYNSAFLDDLTKAMGRKSFD---EDLKALPEKGG-----YLCLFDVDKFKNINDTFGHLL 342 + AF D LT R++FD E L L E+G L L D+D FK +ND +GH Sbjct: 207 LQREAFTDSLTGLPNRRAFDQSVERLSDLRERGEVPGPVALLLIDIDHFKQVNDQWGHFF 266 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI---VHFQVGS 399 GD+VL V ++ Q+ + R+GG+E AVI + S+ + I V Sbjct: 267 GDKVLRSVSTTIRRQVRR-GDILARYGGEEIAVILPSTQHSDACSVAERIRMAVENGEFR 325 Query: 400 INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + ++ S+GVA + L AD LY++KKNGR +I Sbjct: 326 VKITASVGVAIDEDINAFCDLFQAADRALYRAKKNGRNRIE 366 >UniRef50_C6CT46 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT46_PAESJ Length = 324 Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats. Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%) Query: 249 YLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYS-MYNSAFLDDLTKAMGRK 307 +++ ++ ++ NH +L ++ L + A D LT R+ Sbjct: 118 DIMKTKQQLEVLYQQTNEANHRLELLHAQYEKKQQELLDLNEKLEALASTDPLTGLKNRR 177 Query: 308 SFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVD 361 F E L+ E LC+ D+D+FK+INDT+GH +GD VL ++ ++L+ Q P D Sbjct: 178 YFQEQLQKYTELSEQTEAALSLCIVDIDRFKSINDTYGHPVGDLVLTRLAQLLQEQSP-D 236 Query: 362 KGKVYRFGGDEFAVIYTGGTLEELLSILKEIV----HFQVGSINLSTSIGVAHSNECPTV 417 V RFGG+EF ++ E+ L + +G + ++ SIG A T Sbjct: 237 GAVVARFGGEEFVILLPELDQEQALVAAERYRAATETTPLGDLRITISIGTATFAAAETE 296 Query: 418 ERLKMLADERLYKSKKNGRAQIS 440 L AD+ LY SK NGR +++ Sbjct: 297 LSLLQQADQALYHSKNNGRNRVT 319 >UniRef50_C8WUQ5 Diguanylate cyclase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WUQ5_ALIAD Length = 402 Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats. Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 15/165 (9%) Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKNINDTFGHLLGDE 345 A D LT RKSFDE L + +L + D+D FK IND +GHL+GDE Sbjct: 234 EKEAKTDALTGLYNRKSFDEYLDFALQISDGTNTPLHLAVIDIDNFKQINDQYGHLVGDE 293 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINL--- 402 +L + + ++ + + R+GG+EFAVI T E+ + +++I + ++ Sbjct: 294 ILRRTAQAIQQHLAA-GDFLARYGGEEFAVIIPEVTHEQAVQNMEKIREYIANVHHVELD 352 Query: 403 ----STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ-ISWQ 442 + SIG++ T + L AD+ LY++K+ G+ + ++W+ Sbjct: 353 GNRATVSIGLSTHRPGETRDELFERADQCLYRAKQTGKNKIVAWE 397 >UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6I5_BREBN Length = 530 Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 10/180 (5%) Query: 268 NHFERVLDGGLFFSAADVKKLYS-MYNSAFLDDLTKAMGRKSFDEDLKALPEK--GGYLC 324 N +L + F+ ++KK + + A D LT R++ +E ++ + + Sbjct: 345 NREAELLSRAIRFALTNIKKKTEQLTHDARTDPLTGLTNRRTLEETMQKWMAEQIPFSIM 404 Query: 325 LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEE 384 + D+D+FK INDT+GH GDEVL KI+ S + + RFGG+EF V+ + LEE Sbjct: 405 MMDLDRFKAINDTYGHQAGDEVLRHFAKIISSSLRPE-DVSCRFGGEEFVVLVSHTGLEE 463 Query: 385 LLSILKEIVHFQVGSIN-----LSTSIGVAH-SNECPTVERLKMLADERLYKSKKNGRAQ 438 + + I N L+ S G+AH + + E L +ADE +YK+K+ GR Q Sbjct: 464 AYQVAERIRRALETRTNPIGQRLTVSQGIAHYPSHAVSPEGLLHVADEAMYKAKRAGRNQ 523 >UniRef50_C7HZA2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7HZA2_THIIN Length = 530 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 14/198 (7%) Query: 256 NRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDED--- 312 + ++ + + + + L ++ ++ D LT R+ F E Sbjct: 327 HIHVMLAASSLRFDNKAAVLTSLVEITDRKQREQALTRMTQTDALTGFYNRRGFFERANA 386 Query: 313 -LKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGD 371 L++ ++ L L D D FK +NDT GH +GD VL+++ + + + + + R GG+ Sbjct: 387 LLQSARDQAPSLLLIDADHFKRVNDTHGHAVGDTVLVQLANRMNAALR-EGDVIGRIGGE 445 Query: 372 EFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECP-TVERLKM 422 EFAV +LE + I Q + ++ SIGV T+E Sbjct: 446 EFAVFLPTTSLENAYELADRIRLSVSRHALRIQGLRVPMTLSIGVTVLQPGESTLEAALG 505 Query: 423 LADERLYKSKKNGRAQIS 440 AD +Y++K+NGR ++ Sbjct: 506 RADTAMYQAKQNGRNRVE 523 >UniRef50_A4BI17 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BI17_9GAMM Length = 606 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 71/337 (21%), Positives = 129/337 (38%), Gaps = 34/337 (10%) Query: 130 TGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFS------LFKN 183 + + F + + + S + L ++LL+ + + L+++ + Sbjct: 270 IAALHYVCHLFPWRWNRLLLSTSYLILAVASIYTLLAPMVEVSYYLLVYNALLVLIVLAA 329 Query: 184 GKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVIS 243 V F S ++ V A D + + Sbjct: 330 VCVVIHGMLRRHEMAFFFSRSVIPLIIAMLNDIVAASTPDYNFYFAEYALILFLFIHTQR 389 Query: 244 GASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNS----AFLDD 299 A RV ++N+ +R ++ + ++L + + + D Sbjct: 390 QAVQFVTALRV--------AEHLSNNLQREVELKTSELSLRNRELEAKHQRVKLLSQTDH 441 Query: 300 LTKAMGRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKI 353 LT R+S D KAL E+ L + D+D FK IND FGH +GDE L+ V Sbjct: 442 LTGLYNRQSLDNRTKALFEQAEQSDSHLSLIMMDIDHFKPINDRFGHQVGDECLVHVASF 501 Query: 354 LKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK--------EIVHFQVGSINLSTS 405 L+ K + RFGG+EF ++ ++E +++ E V I L+ S Sbjct: 502 LRGLNLRHKDLIARFGGEEFTIVLPDTSIEHAQHLIEDVCTRLSKETVSGSHYEIQLTAS 561 Query: 406 IGVAHS--NECPTVERLKMLADERLYKSKKNGRAQIS 440 G+A ++ P+ E L AD+ LY++K+NGR ++ Sbjct: 562 FGIAERVISQAPSYEELIQKADQALYQAKQNGRNRVE 598 >UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIT1_HALO1 Length = 732 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 125/315 (39%), Gaps = 38/315 (12%) Query: 147 VTHNRSLIFLLGLER-FSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAM 205 V + + I + ER + D + + + + + E+ + + Sbjct: 416 VGFDLAAITIYEPERKRHRVYSVRVSDEDAPLI----DPESLADLEFRDNTGLAAMVVKN 471 Query: 206 EHFAYLPTG-----LYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVR--RVINRG 258 +H YLP G L Y K V L+ ++ L + + + R + + Sbjct: 472 KH--YLPAGGELRDLTAPVYTKQVRLKEAESLLVLPLLSGDEAIGTFMLASRERQQFGKD 529 Query: 259 IVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL----- 313 + E II N L G+ + +M A D LT ++F + L Sbjct: 530 VREMLGIIANQVAVSLQNGMMY--------KTMETMATTDGLTGLTNHRTFQDRLVQLLD 581 Query: 314 -KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDE 372 + + L DVD FKN+NDT+GH +GDEVL +V +L + R+GG+E Sbjct: 582 RAERTRQPAAILLCDVDHFKNVNDTYGHPIGDEVLRQVAGVLLRSVRKI-DIPARYGGEE 640 Query: 373 FAVIYTGGTLEELLSILKEIVH--------FQVGSINLSTSIGVAH-SNECPTVERLKML 423 FAV+ LE +++ + I G ++ SIG+A ++ L Sbjct: 641 FAVVLEATDLEGAMNLAERIRKDVAALVVDSDKGPFQVTMSIGIASFPDDATDRAVLIER 700 Query: 424 ADERLYKSKKNGRAQ 438 AD LY +K++GR + Sbjct: 701 ADSALYLAKESGRNR 715 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 23/186 (12%) Query: 276 GGLFFSAADVKKLYS-------MYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGY 322 GG +++ A ++ + ++ A D LT R+ F E + + Sbjct: 864 GGRWYAVATIRDITERKATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALT 923 Query: 323 LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL 382 + + D+D FK +NDT GH +GDEVL ++ +I ++ + + + R GG+EF V+ Sbjct: 924 MLMMDIDHFKRVNDTHGHGVGDEVLRELARISRTALR-ELDILGRLGGEEFGVLLPETDA 982 Query: 383 EELLSILKEIVHF--------QVGSINLSTSIGVAHS-NECPTVERLKMLADERLYKSKK 433 + + + + G++ ++ SIG A S N+ TVE L AD LY++K+ Sbjct: 983 GPAMEVAQRLRRAIEKASMATDAGTLRITVSIGAATSNNDAETVETLLKRADVALYEAKQ 1042 Query: 434 NGRAQI 439 +GR ++ Sbjct: 1043 SGRNKV 1048 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 21/225 (9%) Query: 238 LVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKL-YSMYNSAF 296 ++ + A + + RR + E I L+ + ++++ + + Sbjct: 333 ILLSFALAYRINMERRR-RQQAQEHALDIQRQANLTLESRVRERTEELEQANEQLRAISL 391 Query: 297 LDDLTKAMGRKSFDEDLKALP------EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKV 350 D LT R+ FDE L+ E L L D+D FK +ND FGHL+GD+ L+ + Sbjct: 392 TDGLTHVANRRRFDEKLETEWNRALRHEHELSLILLDIDHFKQVNDRFGHLVGDDCLVAL 451 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF----------QVGSI 400 IL ++ V R+GG+EFA++ + + + + + + Sbjct: 452 ASILSDEVQRSGDLVARYGGEEFAILLPTTDVAGAQQVAERMRLSVARTPVNSGEHMSPV 511 Query: 401 NLSTSIGVA--HSNECPTVERLKMLADERLYKSKKNGRAQ-ISWQ 442 +L+ S+GVA N + L ADE LY +K +GR + + W Sbjct: 512 SLTISLGVATLTPNRQSDCQELIRRADEALYAAKSDGRNRVVVWH 556 >UniRef50_A8FRI3 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FRI3_SHESH Length = 578 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 66/254 (25%), Positives = 124/254 (48%), Gaps = 21/254 (8%) Query: 208 FAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRR--VINRGIVEKEAI 265 F L + + + + + +F A + ++GA+ + + + + A Sbjct: 316 FMLLFSFMMILLGIMAFNVGNPSAKVFLLASTSSMTGAAVTGMAVWGFIPFTDLTYRAAE 375 Query: 266 INNHFERVL---DGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK--- 319 I + VL + F A + +KL + + A +D LT R++F E + ++ Sbjct: 376 IGIIIDIVLLALALAVKFRATEREKLIA-EHQAKIDPLTGLKNRRAFYEITPSFWKQKRT 434 Query: 320 --GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIY 377 G + + D+D FK INDT+GH +GDEVL++ +L + + V R+GG+EF ++ Sbjct: 435 RVGVSMIIIDIDYFKAINDTYGHTVGDEVLVQFATLLNKNLR-QQDIVARWGGEEFILLL 493 Query: 378 TGGTLEELLSILKEIVH--------FQVGSINLSTSIGVAHSNECP-TVERLKMLADERL 428 L+E +I K + + ++ SIG+AH + T+E+L LAD++L Sbjct: 494 PKTRLKEASTISKHLCESISKHAFIADRNELQVTASIGLAHGSPAQFTLEQLISLADQQL 553 Query: 429 YKSKKNGRAQISWQ 442 Y++K+ G+ QIS++ Sbjct: 554 YRAKQRGKNQISYE 567 >UniRef50_Q1NSN0 GGDEF:GAF n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NSN0_9DELT Length = 707 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 27/227 (11%) Query: 242 ISGASCLYLVRRVINRGIVEKEAIINNHFER-------VLDGGLFFSAADVKKL-YSMYN 293 + C+ + G + +++ H+E + G L + + +L + Sbjct: 479 VRSLCCVPIAINRQLTGFIGFDSLRERHWEEDQADGLLAVIGNLLSAFLERDELERELMI 538 Query: 294 SAFLDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKNINDTFGHLLGDEVL 347 +A D LT R+ F L A E K + +FD+D FK +NDT+GHL GD VL Sbjct: 539 NAITDGLTSLYNRRHFFSRLTAQCEEYRRSGKPFAVAMFDIDHFKRLNDTYGHLTGDCVL 598 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF--------QVGS 399 + +L V R+GG+EFAV+ + + + I+ + S Sbjct: 599 KEFATLLSQGFRA-FDVVARYGGEEFAVMLIDADRQTAAATAQRILESTRRHHFKCEGNS 657 Query: 400 INLSTSIGVAHSNE----CPTVERLKMLADERLYKSKKNGRAQISWQ 442 + ++ S G+ E PT E L AD+RLY++K GR ++ WQ Sbjct: 658 LQITVSGGLVEVGELADGAPTPEALVEEADQRLYRAKNAGRDRVVWQ 704 >UniRef50_A2SEJ2 Diguanylate cyclase n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SEJ2_METPP Length = 351 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 17/205 (8%) Query: 250 LVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSF 309 +++ V++ EA+ + LD A ++ + + A D LT R+SF Sbjct: 133 VLQGVVDSTREMSEAM--RQLQSRLDVNQREIAQLRAEVAAARSEAQTDSLTGLHNRRSF 190 Query: 310 DEDLKAL---PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY 366 ++ + E L L D+D FK +NDT GHL GD+VLM V ++LK + D Sbjct: 191 EQHIAKFLADREAAMSLVLVDIDHFKLVNDTHGHLFGDQVLMAVARVLKESVRND-DLAA 249 Query: 367 RFGGDEFAVIYTGGTLEELLSILKEI-----------VHFQVGSINLSTSIGVAHSNECP 415 R GG+EFA++ L+ + + + I + + ++ S+GVA Sbjct: 250 RIGGEEFALLLPSTPLKGAVELAERIRTSIANSRIRRRNSEQQVGQITVSLGVADLWPSD 309 Query: 416 TVERLKMLADERLYKSKKNGRAQIS 440 E ADE LY SK+ GR +++ Sbjct: 310 NGESWFSRADEALYASKREGRNRVT 334 >UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21PN7_SACD2 Length = 565 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 15/173 (8%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKN 333 S +L A D LT R++++E + L + D+D FK Sbjct: 389 ESEKSRAQLEEQRYKATHDPLTSLPNREAYNERAFHELHRFKRYGHPLTLAVCDLDHFKK 448 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL-------- 385 INDTFGH GD+VL V +++ +++ + V R+GG+EF ++ E+ Sbjct: 449 INDTFGHQAGDKVLKLVAQVVSTRLR-NVDFVARYGGEEFVLVMPETDAEQAKTVLDKMR 507 Query: 386 LSILKEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 +I K F+ + ++ S G+ +VE AD+ LY++K NGR Q Sbjct: 508 AAIAKTPFRFKDSPVTITMSFGIVQFRGEDSVESAFARADKALYEAKANGRNQ 560 >UniRef50_A1S9W6 Putative diguanylate cyclase (GGDEF domain protein) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9W6_SHEAM Length = 557 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 68/319 (21%), Positives = 124/319 (38%), Gaps = 29/319 (9%) Query: 143 YLYP----VTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAI 198 + +P + L+F L L L+ L + + I Sbjct: 243 WSHPMLMTLYCVSGLMFALRFLGIDKLRPHLSYIVLGLAVLMMTVQGVAMTTDDRELGLI 302 Query: 199 FTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRR--VIN 256 F F Y+ T L + T +F A ++ + G+ L + Sbjct: 303 F-----AFDFVYIFTLLMPLLGILAWLHGLPTARLFLLASLSTMVGSCTTGLAVEGYISF 357 Query: 257 RGIVEKEAIINNHFERVLDGGLF---FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL 313 + A I + +L F ++ +++ + A D LT R++F E L Sbjct: 358 NQWTYRAAEIGMFIDAMLLALALAAQFRQSEQERVLA-QQLAATDPLTGIANRRAFSEQL 416 Query: 314 KAL-----PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRF 368 + L + L + D+D+FK+INDT GH +GD+VL + ++++ I ++ + R+ Sbjct: 417 QRLWHLDSQRRCRALIMIDIDRFKSINDTLGHEVGDKVLTDIARVIRYSIR-NRDQCGRW 475 Query: 369 GGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSINLSTSIGVAHSNECPTVERL 420 GG+EF V+ + EE I + I H + ++ S+GV E + Sbjct: 476 GGEEFVVLLASASEEEAGIIAERIRHNIESLSFPAPANKLKVTASVGVCLDEGHSRHEDI 535 Query: 421 KMLADERLYKSKKNGRAQI 439 ADE +Y +K G ++ Sbjct: 536 LRRADEAMYHAKDAGGNRV 554 >UniRef50_Q2BQL8 Probable two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQL8_9GAMM Length = 505 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 18/187 (9%) Query: 272 RVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCL 325 VL + + + SA +D LT+ R+ F+ +++ ++ L + Sbjct: 313 AVLQSRIQILMQLKQSQDQLARSARVDGLTQVNNRREFERNIEMEWRRAQRSKRSLALIM 372 Query: 326 FDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL 385 D+D FK ND +GHL GD L V + +K I + V R+GG+EF VI L+ Sbjct: 373 LDIDHFKPFNDGYGHLAGDGCLRTVAQTIKHSIQRAQDMVCRYGGEEFVVILPETDLDGA 432 Query: 386 LSILKEIV----------HFQVGSINLSTSIGVA--HSNECPTVERLKMLADERLYKSKK 433 I + I F ++ S GVA ++ + L +LAD+ LY++K Sbjct: 433 QMIAERIRKAIAKLKINHEFSSTDNTITISAGVACLSPSQEGSPHELILLADQGLYQAKA 492 Query: 434 NGRAQIS 440 GR Q++ Sbjct: 493 QGRNQVA 499 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 18/190 (9%) Query: 262 KEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK-- 319 +E + + +++L L AA ++ A D LT R F+E L + Sbjct: 538 RERGVRDRVQQLLRSELQERAA------ALARQATTDPLTGLHNRLRFNEGLAQELARVR 591 Query: 320 ----GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAV 375 L +FDVD FK +ND +GH GD+VL+++ + +Q+ + R+GG+EFA+ Sbjct: 592 RTGQPLSLVMFDVDHFKEVNDRYGHPTGDQVLIRLSQTAAAQLR-QTDLLARWGGEEFAI 650 Query: 376 IYTGGTLEELLSILKEIVHF----QVGSI-NLSTSIGVAHSNECPTVERLKMLADERLYK 430 + L + + + + I +++ S GVA + + L AD LY+ Sbjct: 651 LLVDADLHAAVEVAENLRRLVARTPFDQIGSVTASFGVAECRPDESADSLLERADAALYR 710 Query: 431 SKKNGRAQIS 440 +K NGR ++ Sbjct: 711 AKSNGRNRVE 720 >UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax=Pseudomonas fluorescens RepID=Q3KAB6_PSEPF Length = 559 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 14/199 (7%) Query: 255 INRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK 314 + + ++ KE + + +AA + N A D LT R+ FDE L Sbjct: 350 MTQSLLAKERELQETNASLEATVAQRTAALTLANAELLNLATHDGLTGVYNRRRFDEKLT 409 Query: 315 ALP------EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRF 368 + L L D D FK INDT GH GD+VL ++ ++++ I V R+ Sbjct: 410 EYSLLFRRTGRPFALLLIDADHFKRINDTHGHAAGDDVLRQLAQLIQISIRS-TDFVARY 468 Query: 369 GGDEFAVIYTGGTLEELLSILKEIVHFQVGSI------NLSTSIGVAHSNECP-TVERLK 421 GG+EFAV+ + I+ E + + ++ SIGV+ ++ T L Sbjct: 469 GGEEFAVLLPEIAKPDTPDIVAEKIRSAIAEADFPAVGPVTVSIGVSLADPADNTPTTLV 528 Query: 422 MLADERLYKSKKNGRAQIS 440 AD++LYK+K GR Q++ Sbjct: 529 KRADQQLYKAKAAGRNQVA 547 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 18/180 (10%) Query: 278 LFFSAADVKKLYS-MYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDK 330 + D K+L + LD LT+ R+ F + ++ LC+ D+D Sbjct: 243 IIRDITDSKRLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQRFLRYHHPMALCMIDIDH 302 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL----- 385 FK++ND +GHL+GD VL V + L + + R+GG+EF ++ L+ Sbjct: 303 FKSVNDRYGHLVGDTVLCIVAQTLHDNLRQV-DILARYGGEEFVILLPETDLQTACASTE 361 Query: 386 ---LSILKEIVHFQVGSINLSTSIGVAHSNECP--TVERLKMLADERLYKSKKNGRAQIS 440 +++ + + G ++++ S+GV + P T+ERL AD+ LY++K+ GR ++ Sbjct: 362 RLRVAVAERRIETPSGPVSVTLSLGVVAIADGPAMTLERLLDAADQMLYRAKQAGRNRVE 421 >UniRef50_A0KMP3 GGDEF domain protein n=2 Tax=Aeromonas RepID=A0KMP3_AERHH Length = 352 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 62/276 (22%), Positives = 118/276 (42%), Gaps = 27/276 (9%) Query: 187 VTGDEYNAKNAIFTVSEAMEHFAYLPTG--LYVFAYKKDVYLRVCT-----LIIFFAALV 239 + + N F + LP + Y+ + ++ A Sbjct: 80 IPARHHRFVNRAFVTQLGYD-LTDLPDMASWFATVYRDEESRAQAIERWNQAVMTSLANG 138 Query: 240 AVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMY----NSA 295 AV++ S + R + + + G + D+ L+ M + Sbjct: 139 AVVAEMSACLYCKNGQRRWFTITAQLTAD----AMPGWHIVTLRDIHDLHCMIEEVSRLS 194 Query: 296 FLDDLTKAMGRKSFDEDLKALPEKG--GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKI 353 D LT+ R++ + L+AL +G L L D+D FK IND +GH GD L +V +I Sbjct: 195 CTDPLTELGNRRAAGQQLQALWLQGEPFSLILCDIDHFKQINDRYGHPAGDAALCEVARI 254 Query: 354 LKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSINLSTS 405 + Q+ + + R+GG+EF +I G E+++ +++ ++ S +L+ S Sbjct: 255 MTRQLQPAE-HLARWGGEEFLLILPGVDAEQVVERAEQLRRQFVGHVVTWEGQSFSLTMS 313 Query: 406 IGVAHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 +G A E ++ L ++AD+ LY++K NGR ++ + Sbjct: 314 LGCATQEEGQGIDSLLLVADKALYQAKSNGRNRVVF 349 >UniRef50_Q88RK0 GGDEF domain protein n=3 Tax=Pseudomonas putida RepID=Q88RK0_PSEPK Length = 645 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 15/175 (8%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA----LPEKGGYLCL--FDVDKFKN 333 + + L A LD LT R ++ E ++ E GG+L + D+D FK Sbjct: 470 EALGYREHLEEQRQKALLDPLTGLPNRAAWSERVEREMLDWQENGGHLAMAILDLDHFKR 529 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 IND +GHL GD+VL V L+ ++ + + RFGG+EF ++ T + + + Sbjct: 530 INDNYGHLAGDKVLKIVADQLRKRLR-GRDFIARFGGEEFVMLLPQTTPAVAAQVAEVLR 588 Query: 394 --------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 HF+ + ++TSIG+ +++ AD LY++K+ GR ++ Sbjct: 589 ATVEACPFHFKGERVVITTSIGLGAFRSGERSDQVLKRADAALYRAKELGRNRVE 643 >UniRef50_B0TH60 Ggdef domain protein, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH60_HELMI Length = 414 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 68/270 (25%), Positives = 110/270 (40%), Gaps = 15/270 (5%) Query: 181 FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA 240 F G+P + E ++ + V + F + G Y + F ++ Sbjct: 136 FAEGEPESLSEAFRESIAWQVLTTGQPFIHGDPGEYRRYRPSLANYVASIPLTFIKEVIG 195 Query: 241 VISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL 300 I+ S R ++ E I+ L + + Y A D L Sbjct: 196 CINIHSMGP--RYLLTPSKAEILQILAGQAALALKNASMYHQLKQQNEY-FARQAVTDGL 252 Query: 301 TKAMGRKSFDEDLKAL-PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIP 359 T + F + L+ L E+ L LFD+D FK NDT+GH GDE+L ++ IL+SQ+ Sbjct: 253 TGLYNHRYFQQCLQELMKERPVTLLLFDIDHFKGFNDTYGHPCGDEILRQIAHILRSQLG 312 Query: 360 VDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVG----------SINLSTSIGVA 409 + R+GG+EFAVI L + ++I +N++ SIGV+ Sbjct: 313 PQE-VAARYGGEEFAVILPDADLRRGIERAEQIRQAVANFCFRNPDRTLCLNITVSIGVS 371 Query: 410 HSNECPTVERLKMLADERLYKSKKNGRAQI 439 RL AD LY++K+ GR ++ Sbjct: 372 EKLAGWDKSRLIEAADRALYRAKEQGRNRV 401 >UniRef50_Q47C21 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C21_DECAR Length = 410 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 13/198 (6%) Query: 254 VINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL 313 ++ G ++ IN+H + + +A L +++ + +D LT R+ F+E + Sbjct: 208 LVVEGFSVLQSGINSHIANLDEQVAQRTAELESALAAIHRLSTIDPLTGCFNRRLFNERI 267 Query: 314 KA------LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 + ++ + D+D FK INDT GHLLGD+VL + + + ++ V R Sbjct: 268 QEELDRAIRYQRALAVIFCDIDHFKRINDTCGHLLGDQVLQEAAECFRRELRGHIDWVAR 327 Query: 368 FGGDEFAVIYTGGTLEELLSILKEIVHFQVGS-------INLSTSIGVAHSNECPTVERL 420 +GG+EF ++ +L ++ + + S + ++ S GV TV+ L Sbjct: 328 YGGEEFVIVLPETSLPAAIATAERLRLALTESMVALLPGLTVTASFGVTQHVPGETVQEL 387 Query: 421 KMLADERLYKSKKNGRAQ 438 AD +LY +K GR Q Sbjct: 388 LQRADNQLYAAKAAGRNQ 405 >UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X290_DESRD Length = 769 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 16/172 (9%) Query: 283 ADVKKLYSMYNSAFLDDLTKAMGRKSFDE----DLKALP--EKGGYLCLFDVDKFKNIND 336 A + + A D LT R+ F E +L++ + L L+D+D FK IND Sbjct: 591 AQKQAESKLRELATRDSLTGVWNRRYFFELAARELESAQRYKHPLSLILYDIDHFKRIND 650 Query: 337 TFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI---- 392 T+GH++GDEVL ++ +++ + + + + R GG+EFAV+ LE+ ++ + I Sbjct: 651 TYGHMIGDEVLRQLTQLVGANLR-NVDLLARVGGEEFAVLLPHTYLEQAHTVARRILRGV 709 Query: 393 ----VHFQVGSINLSTSIGVAHSNECPT-VERLKMLADERLYKSKKNGRAQI 439 + + G + L+ SIG++ S +E L AD+ LY +K GR I Sbjct: 710 NEAVIRTEAGPLQLTISIGMSSSAHADNCLESLIHDADQALYAAKNKGRNSI 761 >UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8F5_ACIDE Length = 1152 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 21/183 (11%) Query: 276 GGLFFSAADVKKLYS----MYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCL 325 G + A DV + + A D LT R++F L+ + +GG L + Sbjct: 958 QGRLWIAKDVTERRRHEQTLERLATTDALTGLANRRAFMARLEEERMRPSMGGRGGMLIM 1017 Query: 326 FDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL 385 D+D FK +NDT+GH GDEVL+ + ++L+ + R GG+EFAV+ T EE Sbjct: 1018 LDLDHFKRVNDTWGHAAGDEVLVHLARLLRGDLLRATDLAGRLGGEEFAVLLPDTTAEEA 1077 Query: 386 LSILKEIVHF---------QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 L + + + ++ ++ S+GVA + AD LY++K GR Sbjct: 1078 LGVAERLRRALEQSKIHVGDGATLQVTMSLGVAPITGDALA--VLAHADIALYEAKNTGR 1135 Query: 437 AQI 439 ++ Sbjct: 1136 NKV 1138 >UniRef50_D1SRS2 Diguanylate cyclase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SRS2_9BURK Length = 535 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 65/351 (18%), Positives = 121/351 (34%), Gaps = 63/351 (17%) Query: 114 YCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFS-------LLS 166 + ++Q H + DG + V + L++F ++ Sbjct: 201 HVQQVLQGFDVGHKGAIALLRADGTVLTREPFRVEDLGRTLPASQLQQFLQSRSGLAIMP 260 Query: 167 KSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYL 226 + + F +N + E ++ + Sbjct: 261 SPIDGVVRLVSFEHARNVPLAVAVALSEDEIF------TEW-------------RRATAV 301 Query: 227 RVCTLIIFFAALVAVISGASCLYLVRRVINRGI-VEKEAIINNHFERVLDGGLFFSAADV 285 ++ +++ A + + +RR + + EA++ H Sbjct: 302 QIAGILLLLAVIGPAGAYLIRTVKLRRDADLRLRTTHEALVEAH---------------- 345 Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL------PEKGGYLCLFDVDKFKNINDTFG 339 M + A D LT R+++D ++ + ++ + +FDVD FK ND G Sbjct: 346 ---ARMEHMAEHDGLTGVHNRRAYDRRIREVMAQCRRYQRPVSVVMFDVDFFKRYNDALG 402 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK--------- 390 H GDE L +V L I + R+GG+EFA++ L + + Sbjct: 403 HPEGDECLRRVANALAGSIRRPGDFIARYGGEEFAIVLPETDAPGALQVAQAARSAVIAL 462 Query: 391 EIVHFQVGSINLSTSIGVAHS--NECPTVERLKMLADERLYKSKKNGRAQI 439 + H +++ S GVA S E T E L AD LY++K+ GR +I Sbjct: 463 RLPHPGSPFGHVTVSGGVACSPGQEPETPEELLGRADTALYEAKQQGRDRI 513 >UniRef50_A4BD76 GGDEF domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BD76_9GAMM Length = 476 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 15/170 (8%) Query: 285 VKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTF 338 + +L+ + LD LT R+ FD L A ++ + + D+D FK IND F Sbjct: 304 LTELHKERQLSMLDPLTGLPNRQGFDRRLSAELARAERYDQALSIAIIDIDFFKRINDEF 363 Query: 339 GHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV----- 393 GHL+GD+VL + K +K ++ + + RFGG+EF ++ TLEE L+ + ++ Sbjct: 364 GHLVGDKVLKMMAKEMK-RVCRESDFLSRFGGEEFVLLLPQTTLEEGLTAVDKLRRHVET 422 Query: 394 ---HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 H+Q +NL+ S GVA T+E AD LY SK+ GR +++ Sbjct: 423 RPFHYQNTPVNLTVSAGVAQRQVNETLESWLDRADAALYVSKREGRNRVT 472 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 19/202 (9%) Query: 255 INRGIVEKEAIINNHFERVLDGGLFFSAADVKKLY-SMYNSAFLDDLTKAMGRKSFDEDL 313 I R + E++A+ + E + L ++ +L ++ A D LT R+ DE L Sbjct: 436 ITRNVSERKAVESALRET--NRQLHARIEEIGRLQVALQELAVRDSLTGLYNRRYLDETL 493 Query: 314 KALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 + + L + D+D FK +NDT+GH +GDEVL + L + I + R Sbjct: 494 EREVSRARREGIPLSLVMLDIDHFKQVNDTYGHQVGDEVLRILASTLSADIRAE-DVACR 552 Query: 368 FGGDEFAVIYTGGTLEELLSILK------EIVHFQVGSINL--STSIGV-AHSNECPTVE 418 +GG+EF ++ LE + + E + + G+ + + S+GV A+ T + Sbjct: 553 YGGEEFLILLPNMPLETTMLRAQGWRSAVEALSVKHGNFQITFTISLGVAAYPEHGKTPD 612 Query: 419 RLKMLADERLYKSKKNGRAQIS 440 L AD+ LY++K GR Q+S Sbjct: 613 DLTRCADQALYRAKNEGRNQVS 634 >UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXY8_CHRSD Length = 608 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 17/187 (9%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYL 323 F + + + S ++V+ + ++ D LT R+ DE L + + Sbjct: 419 FAKGVAEDMVLSLSNVRLREQLEEASIRDALTGLYNRRFLDETLARELARAERQAVPLCV 478 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 + D+D FK IND +GH LGD L+ V ++L + + D V R+GG+EF +I G L+ Sbjct: 479 LMLDIDHFKPINDDYGHALGDRALVAVAELLNAHVRRD-DIVCRYGGEEFVIIMPGAGLD 537 Query: 384 ELLSILKEIVH---------FQVGSINLSTSIGVA-HSNECPTVERLKMLADERLYKSKK 433 + I L+ S+G+A + E L AD LY++K+ Sbjct: 538 AAQRRGDHLRRCVSALDVEANVPAPIRLTVSLGLACYPQHGDNAEHLLHSADMALYEAKQ 597 Query: 434 NGRAQIS 440 GR +++ Sbjct: 598 GGRNRLT 604 >UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB67_9DELT Length = 752 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 18/220 (8%) Query: 236 AALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSA 295 ++ ++ G L + + +R V+ RV+ + S + + SM A Sbjct: 530 VLVLPLVRGEQVLGAITLISSR--VKAYPPAAREMLRVISHQVGVSMQNARMYQSMEERA 587 Query: 296 FLDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMK 349 D LT ++F E L+ L + + L D+D FK++NDT+GH +GD VL + Sbjct: 588 TTDGLTGLTNHRAFQERLEQLHALSERTGQKFSIILTDIDHFKSVNDTYGHPVGDAVLKR 647 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELL--------SILKEIVHFQVGSIN 401 V I + V R+GG+EF ++ E I + + GS + Sbjct: 648 VAAIFTRRARKV-DIVARYGGEEFVLVLPDTDAEGAAVFANRLREEIAAQTITSDNGSFS 706 Query: 402 LSTSIGVAHSNECPTV-ERLKMLADERLYKSKKNGRAQIS 440 ++ S+GVA T L LAD+ LY K++GR +++ Sbjct: 707 VTLSLGVAEFPRDSTKRHELIELADQALYYCKEHGRNRVT 746 >UniRef50_Q21VE2 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21VE2_RHOFD Length = 398 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 26/211 (12%) Query: 255 INRGIVEKEAIINNHFERVLDGGLFFSAA---------DVKKLY-SMYNSAFLDDLTKAM 304 IN+G A+ E+ AA +V++L ++ A D LT Sbjct: 180 INQGTKSALALARKEIEQRKQAEQSLKAANEELHLRVFEVQRLQVELHEQAIHDPLTGLY 239 Query: 305 GRKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQI 358 R+ + L + D+D FK +ND++GHL GDEVL++V +LK Sbjct: 240 NRRYLSDALAREIIQAKRANSSLTFVMADIDHFKFVNDSYGHLAGDEVLVQVASLLKKHA 299 Query: 359 PVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIGV-A 409 R+GG+EF +++ G +LE +EI + + +I + S GV A Sbjct: 300 R-GSDIACRYGGEEFLLVFPGTSLELAHKRAEEIQQNCAALSIQHEGKNIAVMLSFGVAA 358 Query: 410 HSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + + E++ + AD+ LY+SK NGR Q++ Sbjct: 359 YPDHGQQWEQIIVKADKALYQSKCNGRNQVT 389 >UniRef50_D0I2V0 GGDEF family protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I2V0_VIBHO Length = 341 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 99/223 (44%), Gaps = 20/223 (8%) Query: 235 FAALVAVISGASCLYLVRRVINRGIVEKEAIIN--NHFERVLDGGLFFSAADVKKLYSMY 292 F+ L V A + V+ + + + A+ + F+ L L+ Sbjct: 117 FSQLARVDEEALSMEETVAVVRKAMKDSNALRQSTDFFKNQLAEAQKEIVRLEDTLHKAN 176 Query: 293 NSAFLDDLTKAMGRKSFDEDLKAL----PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLM 348 A D LT R++ D +L+AL P KG L L D+D FK NDT+GHL+GD+VL Sbjct: 177 EEALHDALTGIYNRRALDAELEALVATPPPKGFSLLLCDLDHFKRFNDTYGHLMGDQVLK 236 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI-------- 400 K L D K YR+GG+EFA++ L + + I + + Sbjct: 237 LTAKRLSDYCR-DGIKAYRYGGEEFALLVPNRPLSGACRVAETI-RATIDKLALKDKRTG 294 Query: 401 ----NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 N+S SIGVA ++ L AD +LY +KK GR ++ Sbjct: 295 KKLDNISISIGVAAFEHGESIRDLISRADTQLYDAKKLGRNRV 337 >UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KAX1_PSEFS Length = 388 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 68/296 (22%), Positives = 127/296 (42%), Gaps = 25/296 (8%) Query: 159 LERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEY-NAKNAIFTVSEAMEHFAYLPTGLYV 217 ER+ L + ++ T D A +FTV ++ + Y+ Sbjct: 101 PERWER-RYWLTLMLSAGIWGAGALAVMPTDDRLSQALVMLFTVGMSVSAVSCYSAYRYM 159 Query: 218 FAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGG 277 + L CTL + F + A + V + +V +++ E+ Sbjct: 160 TLASLALVLLPCTLWLLFQPSSMQVGVAIAVL----VFSTFVVSATRKLSDALEKA---- 211 Query: 278 LFFSAADVKKLYSM-YNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDK 330 F +++ +++ +A D+LT M R++F E + + + D+D Sbjct: 212 -FRLTRQMERAHTISTRAAQTDELTGLMNRRAFFEHAQVLYEQCRHNRQPLCALMMDMDH 270 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK 390 FK INDT+GH GD+VL ++ ++ + R GG+EFAV+ +L+ +I + Sbjct: 271 FKQINDTYGHQAGDQVLRQIGGVISASFR-QADVYGRLGGEEFAVLLPNTSLDTARTIAE 329 Query: 391 EIVHFQVGSIN-----LSTSIGVAHSN-ECPTVERLKMLADERLYKSKKNGRAQIS 440 ++V G + LS S+GVA ++ + + L AD+ LY++K GR Q++ Sbjct: 330 QLVKAISGLASEPVHGLSASLGVASTHTQDQDLHGLMNTADKALYRAKAQGRNQVA 385 >UniRef50_Q2BQN9 Diguanylate cyclase, putative n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQN9_9GAMM Length = 529 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 20/197 (10%) Query: 261 EKEAIINNHFERVLDGGLFFSAADVKKLYSMYN----SAFLDDLTKAMGRKSFDEDLKAL 316 ++E + +E ++ G + + +K+ + A D LT R ++DE + Sbjct: 332 QREQRLQGRYEDLI-GKVEQMEEETRKVKAHMEEERLRARTDPLTGLPNRAAYDEQIAQE 390 Query: 317 PEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGG 370 E+ + + D+D FK INDT+GHL GD+VL V K++ I V V R+GG Sbjct: 391 YERWSRYRTSFSVVVADLDFFKKINDTYGHLAGDKVLRLVAKVITKNIRV-TDFVARYGG 449 Query: 371 DEFAVIYTGGTLEELLSILKEIVH--------FQVGSINLSTSIGVAHSNECPTVERLKM 422 +EF ++ EE + ++ F + ++ S GV E +++ + Sbjct: 450 EEFVILLPSTVAEEAAQAMDKLRESLASSPFNFHGKPVGITMSFGVTEIKEGDSLDDVFT 509 Query: 423 LADERLYKSKKNGRAQI 439 ADE LY++K++GR + Sbjct: 510 RADEALYQAKEDGRNLV 526 >UniRef50_Q7M861 SIGNAL TRANSDUCTION RESPONSE REGULATOR-CheY like receiver and GGDEF domain n=1 Tax=Wolinella succinogenes RepID=Q7M861_WOLSU Length = 501 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 23/211 (10%) Query: 239 VAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLD 298 VA+ G L+ ++ G EA + + +L+ ++ + +F D Sbjct: 298 VALAIGGVLWLLILGILRFGYHRYEARMRLYEAWLLEKN-----------QTLEHLSFFD 346 Query: 299 DLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 LT+ R++ +E ++ L + + +FD+D FK +NDT+GH GDEVL ++ + Sbjct: 347 HLTQIANRRALEERIRKSISRFELERQSFSMVIFDIDDFKRVNDTYGHGAGDEVLKQIAR 406 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI-----VHFQVGSINLSTSIG 407 + K I + R+GG+EF + ++ I + + H ++ S G Sbjct: 407 LAKESIRGE-DMAGRWGGEEFVIYLHHASISSAHEIAERLRQKIARHAFDPRFKVTCSFG 465 Query: 408 VAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 V+ E + L ADE LY++K+ G+ Q Sbjct: 466 VSEFREGMDFDSLISRADEALYEAKRQGKNQ 496 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 12/164 (7%) Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKNINDTFGH 340 + + A D LT R++ + L+ L + K L + D+D FK++ND +GH Sbjct: 287 REQKLLEIAHSDPLTGLNNRRAAEHTLERLIDTARISGKPFSLIIGDIDHFKSVNDRYGH 346 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH-----F 395 GD VL V ILK +I + + R+GG+EF ++ +L+ + I Sbjct: 347 PAGDRVLTSVAVILKQRIRL-QDVAARWGGEEFLILVPDSSLDHAAELADRIRKGVEDLL 405 Query: 396 QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + +++ S+GVA + T L AD+ LY++K+ GR ++ Sbjct: 406 IPNTGSVTISLGVAQLSPGETAASLIQRADKALYQAKRRGRNRV 449 >UniRef50_D2R258 Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R258_9PLAN Length = 779 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 14/167 (8%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDE----DLKALPEK--GGYLCLFDVDKFKNINDTFG 339 +++ +++ A D LT+ R FDE +++ ++ L + D+D FK IND FG Sbjct: 411 QRVQTLHEKATRDPLTQVANRAEFDEIHATYVQSHRDRRLPFSLIICDIDYFKRINDNFG 470 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH----- 394 H GDEVL +L+ V R+GG+EF ++ +E+ Sbjct: 471 HQAGDEVLQSFAALLRRHTR-PGDLVARYGGEEFVLLCIDCDNTAATRRAEELRRELAEF 529 Query: 395 --FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 +G+ +++ S GV T E + AD LY++K++GR + Sbjct: 530 PMAALGNKSITASFGVTELQNGDTPETMLRRADRALYQAKESGRNTV 576 >UniRef50_A3WKY3 Putative uncharacterized protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WKY3_9GAMM Length = 363 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 76/299 (25%), Positives = 123/299 (41%), Gaps = 24/299 (8%) Query: 150 NRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFA 209 SL++L+ +R L L + + L+ + F + A+F Sbjct: 62 AASLLYLVKRKRLLELVSWLFVLTLGLLITAF-LSLAAGSNNGYLWTAVFP--------- 111 Query: 210 YLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYL-VRRVINRGIVEKEAIINN 268 P ++ + +L V IF L I YL + +N V +++ Sbjct: 112 --PFAFFLLGKTRGFWLTVVFFTIFLIQLYISIFVKQVPYLSLGGFLNTLEVFVISLLLY 169 Query: 269 HFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYL----C 324 F + + + A D LT+ R+ D L +L ++ L Sbjct: 170 RFYEKTRTEANELLQE--QSIRLEKMAKTDKLTQLYNRQYLDVTLFSLYKERRTLPISVL 227 Query: 325 LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEE 384 L DVD FK IND GHL GDEVL+K+ + L + D V R+GG+EF +I + + Sbjct: 228 LLDVDLFKRINDEHGHLFGDEVLVKMAQRLTEVVR-DDDVVGRWGGEEFLIIAPNTSKSD 286 Query: 385 LLSILKEIVHFQV----GSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 L + + + S+ S SIGV+ ++ + E L AD LY++K NGR Q+ Sbjct: 287 ALGLAERVRRSLNMSITESVTTSVSIGVSSADRVKSPEELISQADRALYQAKSNGRNQV 345 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 17/178 (9%) Query: 278 LFFSAADVKKLYS-MYNSAFLDDLTKAMGRKSFDE----DLKALPEK--GGYLCLFDVDK 330 +F + K+L S + + A D LT A R+SF E +L+ + L L D+D Sbjct: 223 VFRDISARKRLESDLKHLATTDGLTGAYNRRSFVEVCGQELQRADRRARPTSLLLMDIDH 282 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK 390 FK +ND FGH GDEVL ++V+ + + + V R GGDEFAV+ TLE+ + + Sbjct: 283 FKRLNDRFGHAAGDEVLRQIVETGRRVLRSE-DVVGRIGGDEFAVLLPATTLEQAGRVAE 341 Query: 391 EI--------VHFQVGSINLSTSIGVAHSNEC-PTVERLKMLADERLYKSKKNGRAQI 439 ++ V + G+ + S GVA TVE L AD LY +K GR + Sbjct: 342 QLRTTYERLAVPARGGTATFTVSFGVAEWKPHLRTVEELLQRADRALYAAKNAGRNCV 399 >UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TG17_HELMI Length = 324 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 24/235 (10%) Query: 228 VCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLD------GGLFFS 281 + + + A + + + + + + + +D L Sbjct: 79 IMVTALTNIEDLDRAFAAGAMDYIMKPVKKRELLARIRSALALKTEMDRRKEREEELLRV 138 Query: 282 AADVKK-LYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNI 334 A++++ + + N + LD LT R+ FDE L + ++ L LFD+D FK Sbjct: 139 TAELEEAVRKLQNLSSLDGLTGLANRRRFDEYLASEWKRAIRNGTPISLILFDIDWFKPY 198 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV- 393 NDT+GH+ GD+ L + ++ + V R+GG+EFAVI + E L++ + I Sbjct: 199 NDTYGHIQGDDCLKAIASLMPKVVRRSSDLVCRYGGEEFAVILPDTSQEGALAVAESIRE 258 Query: 394 --------HFQVGSINLSTSIGVAHSNECPTVE--RLKMLADERLYKSKKNGRAQ 438 H Q ++ S+GVA + P+ E L ADE LY++K+ GR + Sbjct: 259 ALSEAGIEHRQSPLDRVTVSVGVATAYPSPSSEPVTLIGYADEALYEAKRQGRNR 313 >UniRef50_Q8D4A5 FOG: GGDEF domain n=3 Tax=Vibrio vulnificus RepID=Q8D4A5_VIBVU Length = 357 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 94/187 (50%), Gaps = 19/187 (10%) Query: 271 ERVLDGGLFFSAADVKK---LYSMYNSAFLDDLTKAMGRKSFDE------DLKALPEKGG 321 RVL+ + AA V K + M A +D LT A+ R++F E D + Sbjct: 164 ARVLETLANWVAAQVHKHQQINKMIELAHIDPLTGALNRRAFVEATYFINDKPRHYDHHT 223 Query: 322 YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT 381 L + D+DKFK IND FGH GD+VLM++ LK QI D + RFGG+EFA++ Sbjct: 224 ALLMIDLDKFKEINDQFGHPAGDKVLMQIAATLKKQIRSD-DLLARFGGEEFAILLHHVN 282 Query: 382 LEELLSILKEI--------VHFQVGSINLSTSIGVAHS-NECPTVERLKMLADERLYKSK 432 EE +++ + + + I + SIG+A + E L LAD LY +K Sbjct: 283 AEEAMTLAETLRVTVEQLTIEHHQHRIQCTVSIGIALPSSPNQGFEELMQLADNALYVAK 342 Query: 433 KNGRAQI 439 ++GR QI Sbjct: 343 RSGRNQI 349 >UniRef50_Q2SK89 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SK89_HAHCH Length = 528 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 22/278 (7%) Query: 183 NGKPVTGDEYNAKNAIFTVSEAMEHFAY-LPTGLYVFAYKKDVYLRVCTLIIFFAALVAV 241 G + D + + + ++ + F T +Y + V + F ++ + Sbjct: 228 EGYTLIPDIESDLSILVRINADRDFFNLTAATFDRAMSYASYLLTAVLGIFAFLVLMLVL 287 Query: 242 ISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFF---SAADVKKLYSMYNSAFLD 298 A VRRV ++ +EK + + + G F ++ + +F D Sbjct: 288 RPLARLEAYVRRVQSQPQLEKLDLPKLPRDEIGKLGRAFYQLLCQLQEQSEKLREMSFRD 347 Query: 299 DLTKAMGRKS----FDED--LKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 +LT R++ DE L + + + DVD FK+ ND +GH +GDEVL +V Sbjct: 348 ELTGLANRRAVIGYLDERWRLALEQKSDIAIIICDVDYFKDFNDHYGHDMGDEVLKEVAS 407 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV----------HFQVGSINL 402 L+ V R+GG+EF ++ G L + + +V HF + + Sbjct: 408 ALRRGANKRLDLVARYGGEEFLIVLPGADLHIGEQVAERLVKRVYEMKLPHHFSQIAQYV 467 Query: 403 STSIGVA--HSNECPTVERLKMLADERLYKSKKNGRAQ 438 S S GVA E T E LADE LYK+K++GR + Sbjct: 468 SVSCGVAAGSPGEDETKEEWIRLADEALYKAKESGRNR 505 >UniRef50_B7KF34 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KF34_CYAP7 Length = 620 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 24/239 (10%) Query: 225 YLRVCTLIIFFAALVAVISGASCLYL-VRRVINRGIVEKEAIINNHFERVLDGGLFFSAA 283 ++ + +L+I+ + L ++ A Y + + ++E+ A + R+ + S A Sbjct: 382 FIGLISLVIYLSGLNRKLNHARLAYSELNASLETKVIERTAELKEVNSRLEAEIIERSQA 441 Query: 284 DVKK---LYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNI 334 + +K + + + +D+LT R+SFD LK + L L D+D FK + Sbjct: 442 EAEKERLIAKLNRLSHIDNLTSLANRRSFDLYLKQEWNRHYRTQLPLSLILCDIDYFKKL 501 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH 394 NDT+GH GDE L +V K+LK R+GG+EFA+I LE + L E + Sbjct: 502 NDTYGHQAGDECLKRVAKVLKKHTKRSSDLAARYGGEEFAIILPETDLEGAI-FLAESIK 560 Query: 395 FQVGSINL-----------STSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQIS 440 + S+ + S + GVA + +++ L LAD+ LY+ K NGR Q+S Sbjct: 561 DNIKSLRIPNSASLVKPFVSMTFGVATMVPTQHQSLDILISLADQALYRGKNNGRDQVS 619 >UniRef50_B1JAS6 Diguanylate cyclase n=5 Tax=Pseudomonas RepID=B1JAS6_PSEPW Length = 469 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 30/241 (12%) Query: 229 CTLIIFFAALVAVISGASCLYLV-RRVINRGIVEKEAIINNHFERVLDGGLFF------- 280 T F +L+ +I+G++ + V + +++ + + E + + + Sbjct: 221 WTYSPFLVSLLTLIAGSTLIVAVAQNLMHFSVPQSELGVTTLMSARMGIAMLILGPLVVA 280 Query: 281 --SAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK--------GGYLCLFDVDK 330 S A+ L + + A +D LT A+ R +F AL + L + D+D Sbjct: 281 CVSQANRSLLARLAHQATIDHLTGALTRSAFTRRANALLDSRQKHAQALPLTLMMLDIDH 340 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK 390 FK+IND GH +GD+VL + + L+ Q+ + + R GG+EF V+ G E + Sbjct: 341 FKSINDRHGHGVGDQVLRQFARTLQDQLHGGE-LLARMGGEEFVVLLPGLAPERASFTAE 399 Query: 391 EIVHFQ--------VGSINLSTSIGV---AHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + G ++ SIG+ A PT++ L AD+ LY++K +GR ++ Sbjct: 400 RLRRAVQDLHLAKGDGRPQITVSIGLDGCAGHEPAPTLDELLARADQALYRAKAHGRNRV 459 Query: 440 S 440 Sbjct: 460 E 460 >UniRef50_Q1NY46 GGDEF n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NY46_9DELT Length = 525 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 80/180 (44%), Gaps = 24/180 (13%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFG 339 + M A D LT R+SF + L E+ L + D+D FK +NDT G Sbjct: 346 RSRDEMVRLATTDPLTGLANRRSFMDRLGLEQERFKRFGNPVGLLMLDIDFFKKVNDTHG 405 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV------ 393 H +GDEVL + +++ + V R GG+EFAV+ G LE L + Sbjct: 406 HHVGDEVLGQFATLMRQNLR-HVDLVGRLGGEEFAVVLPGADLEGTLHFANRLRCGVGER 464 Query: 394 ----------HFQVGSINLSTSIGVAHSNECPT-VERLKMLADERLYKSKKNGRAQISWQ 442 G +N++ SIGVA VE + AD LY++K+NGR +I + Sbjct: 465 LQGEVCGHRFSTSAGILNITVSIGVAVLQPGDDGVEPVLRRADTALYRAKENGRNRIEVE 524 >UniRef50_B9ZP06 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZP06_9GAMM Length = 483 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 64/307 (20%), Positives = 116/307 (37%), Gaps = 26/307 (8%) Query: 151 RSLIFLLGLE--RFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHF 208 R+ +F L + SL+++ A + +++ + ++ + H Sbjct: 177 RAYVFRFDLPAGQMSLVNEWCARGVQA-----YRDHLQAIPLHEHNWVTSQILARKVVHV 231 Query: 209 AYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINN 268 + A +++ + R + LV+ + L + + Sbjct: 232 PDVHELPAEAAVEQEEFRREQIRSLLLIPLVSDQNAFGMLGFDAVEAPHRWTDDQITALR 291 Query: 269 HFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK----ALPEKGGYLC 324 ++ G L A + + A +D LT R+ FD L+ A E+ L Sbjct: 292 LVADMIAGTL----ARKQVEQELARQARVDGLTGLANRREFDHQLERECAARRERSLSLL 347 Query: 325 LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEE 384 + D+D FK ND FGH GD+ L V +++S + R+GG+EFA + E Sbjct: 348 MIDIDHFKPYNDAFGHQAGDDCLRAVADVIRSILNRPADVGARYGGEEFACVLADTNPEG 407 Query: 385 LLSILKEIVHF---------QVGSINLSTSIGVAHSNECPTVE--RLKMLADERLYKSKK 433 L + + I ++ SIGV + VE L ADE LY++K+ Sbjct: 408 GLRVAERIREAVYGLDLKQPDTDEGRVTISIGVCSVHTRWPVEPRALLRQADEALYRAKR 467 Query: 434 NGRAQIS 440 GR ++ Sbjct: 468 AGRNRVE 474 >UniRef50_C1XHK3 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XHK3_MEIRU Length = 351 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 130/319 (40%), Gaps = 23/319 (7%) Query: 138 KTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNA 197 + F+ +LYP + I + + L E + + Y Sbjct: 38 EGFIRWLYP-----AFILMCAGWAWRLYRGVNLGAIERETIATVTLFFTIKLAYYLFWGN 92 Query: 198 IFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINR 257 + +E ++ + V Y + T + A + ++ V + R Sbjct: 93 LEQNWVEIESTYWVMAFVMVLLYIVFDARKGLTYSLALAVVTLILGLLRLGGEVAQGQYR 152 Query: 258 GIVEKEAIINNHFERVLDGGLFFSAADVK--------KLYSMYNSAFLDDLTKAMGRKSF 309 E A + + GL ++ A VK ++ M+ A D LT R + Sbjct: 153 --TEFLAFVRSEMRLFAMAGLLYALAIVKDQLALANRQVEEMHALARTDPLTGLPNRLAL 210 Query: 310 DEDLKALPEK--GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 E L+ + G YL L D+D+FK IND FGH GDEVL +V + L+ + + + R Sbjct: 211 SELLEEASQHMHGLYLVLLDIDRFKQINDRFGHAAGDEVLREVARRLRVSMRKE-DVLGR 269 Query: 368 FGGDEFAVIYTGGTLEE---LLSILKEIVHFQVGSI--NLSTSIGVAHSNECPTVERLKM 422 +GG+EF ++ G + ++ + L+E + F + +S S GVA + ++ L Sbjct: 270 WGGEEFMILMRGESQQDVPAAVERLREDIAFWPFKLVGPVSASFGVAEGHIGDSIHALVE 329 Query: 423 LADERLYKSKKNGRAQISW 441 AD LY++K+ GR ++ Sbjct: 330 RADRALYEAKRLGRNRVEM 348 >UniRef50_Q2T680 GGDEF domain protein n=32 Tax=Burkholderia RepID=Q2T680_BURTA Length = 506 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 112/345 (32%), Gaps = 62/345 (17%) Query: 114 YCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDS 173 Y ++ + DG+ + T Sbjct: 199 YLRQLLAAASAGPHGVLALVHADGRIVARMPFDET------------------------- 233 Query: 174 ENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLII 233 + L +G + ++ F E ++H +Y R+ + + Sbjct: 234 ---LVGLDLSGTSLYSRMQFGRSGEFFDVEPIDHMKRFY-----------LYRRLDGVPL 279 Query: 234 FFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYN 293 +A + + I + S A+ ++ Sbjct: 280 VVQVAIADDDIYATWRVRAWRFGVVTGVFALIFVVMSAYLAHSLWRKSTAEA----ALAR 335 Query: 294 SAFLDDLTKAMGRKSFDEDLKALP------EKGGYLCLFDVDKFKNINDTFGHLLGDEVL 347 A D LT R++ DE L+ E+ + D+D FK NDT+GH +GDEVL Sbjct: 336 LAGTDSLTGLHNRRALDETLEREWRRAVGGERPLAILFVDIDHFKRYNDTYGHQVGDEVL 395 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGS 399 V + + Q V R+GG+EF V+ L + + + + + Sbjct: 396 ATVSRCIAQQAARLGDVVARYGGEEFVVVLPDTPRGGALVVAERVRLGVRMLGIEHEGSE 455 Query: 400 IN-LSTSIGVAHSNE----CPTVERLKMLADERLYKSKKNGRAQI 439 + ++ S+GVA P + + AD+ LY++K GR ++ Sbjct: 456 VGFVTVSVGVAVWQPDGARAPHIAAIVEAADQALYQAKAAGRNRV 500 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 17/189 (8%) Query: 267 NNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY---- 322 R + + + A+++ + N + D LT R+ +E L+ + Sbjct: 813 KRQLARTVAEQMALAIANLQLREELQNRSIRDPLTGLFNRRYLEESLEREINRACRNDHN 872 Query: 323 --LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 + + D+D FK NDTFGH GD VL +V K+LKS + R+GG+E +I Sbjct: 873 VGVIMIDIDHFKRFNDTFGHDGGDAVLKEVGKLLKSSLRA-SDIACRYGGEEMTLILPEA 931 Query: 381 TLEELLSILKE---------IVHFQVGSINLSTSIGVA-HSNECPTVERLKMLADERLYK 430 ++E ++ I H + ++ S+GVA T + + AD LY+ Sbjct: 932 SIENTYKRAEQVRKLIKQINIEHKRQSLGTITASLGVACFPEHGMTGDAVVQRADTALYQ 991 Query: 431 SKKNGRAQI 439 +KK GR ++ Sbjct: 992 AKKEGRDRV 1000 >UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=Cyanothece RepID=B7JZG8_CYAP8 Length = 668 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 20/218 (9%) Query: 239 VAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLD 298 + +I+ L L+ +N VE H + + + A++K ++ + D Sbjct: 446 IPMIAHGETLGLL--YLNLSNVELFNPSQQHLAEAVSKQIAIAFANLKLRETLEEQSLRD 503 Query: 299 DLTKAMGRKSFD----EDLKALPEKGGY---LCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 LT R+ + +L + + Y L + D+D FK ND FGH GD VL V Sbjct: 504 PLTGLFNRRYLEISINRELNTIIQDQDYSLGLIMLDIDHFKQFNDNFGHEAGDLVLQTVA 563 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSI-NL 402 L++ I RFGG+EF +I +L + L ++I + ++ + ++ Sbjct: 564 NCLQNHIR-QSDIACRFGGEEFMIILPRASLNKTLERAEKIRESIKQLKIEYKSQPLDSI 622 Query: 403 STSIGV-AHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + S GV A T+ L + AD+ LY++KK GR ++ Sbjct: 623 TASFGVAAFPQNGTTLHELFIDADKALYQAKKQGRDRV 660 >UniRef50_B1KK06 7TM domain sensor diguanylate cyclase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KK06_SHEWM Length = 623 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 104/262 (39%), Gaps = 22/262 (8%) Query: 197 AIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVIN 256 +FT S A+ L L + Y D + +I+ + + + L R + Sbjct: 352 GLFTFSWAVFILGMLTASLRLRGYLIDSFWLQW--LIYLGGFIEAFLLTTIMVLRLRDMQ 409 Query: 257 RGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFL----DDLTKAMGRKSFDE- 311 ++ E H E + K+L A D LT R++F E Sbjct: 410 HAKLKIELTHRQHLENYANELSQQVKLQTKQLLEAKEKAETEARVDILTGLTNRRAFIES 469 Query: 312 ------DLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKV 365 PE YL + D+D FK INDT+GH GD L+ V L I V Sbjct: 470 AHGFLARANRQPETHLYLLMIDIDHFKKINDTYGHSAGDAALVAVANSLSETIRTI-DVV 528 Query: 366 YRFGGDEFAVIYTGGTLEELLSILKE--------IVHFQVGSINLSTSIGVAHSNECPTV 417 R GG+EFA + + +++ + ++ + I L+TSIG+A + Sbjct: 529 SRLGGEEFAALMENKDPQGAINLSERLRKAIEELVIEHEGQQIKLTTSIGIAKWGPMDNL 588 Query: 418 ERLKMLADERLYKSKKNGRAQI 439 + L AD LY++K++GR + Sbjct: 589 DTLMNQADRALYQAKESGRNCV 610 >UniRef50_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5G2_ACIC5 Length = 369 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 17/208 (8%) Query: 248 LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVK-KLYS----MYNSAFLDDLTK 302 L ++ R + + ++ R + + +L + D LT Sbjct: 146 LRVLARQVAAQFQMRRQLLELREARAKQAKTEQRLRESQTRLKEANACLQEMVTTDALTG 205 Query: 303 AMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKS 356 R++FDE L+ A + L + DVD FK +NDT GH GD+VL V + L+ Sbjct: 206 VKNRRAFDEGLQQAWKMSARTKSPLSLLMVDVDHFKRVNDTLGHEAGDDVLRLVAQTLQ- 264 Query: 357 QIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE----IVHFQVGSINLSTSIGV-AHS 411 + V R+GG+EF V+ G E ++ ++ I + L+ SIGV + S Sbjct: 265 FMTRSTDMVARYGGEEFVVVLPGTEAEPAVAFAEQLRLNIANLSWRGHPLTVSIGVDSGS 324 Query: 412 NECPTVERLKMLADERLYKSKKNGRAQI 439 T L AD LY++K +GR ++ Sbjct: 325 GSGKTECELVAHADAALYRAKNSGRNRV 352 >UniRef50_B8J4U6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J4U6_DESDA Length = 324 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 10/164 (6%) Query: 285 VKKLYSMYNSAFLDDLTKAMGRKSFDEDL---KALPEKGGYLCLFDVDKFKNINDTFGHL 341 + ++ S+ D LT RK D L L +K + DVD FK IND+FGHL Sbjct: 144 ITRVRQADESSLTDALTGLYTRKYLDMVLGRYTRLEKKPFCCIMLDVDHFKQINDSFGHL 203 Query: 342 LGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSIN 401 +GD VL V ++++ + + V R+GG+EF V+ G LE+ + I G I+ Sbjct: 204 VGDSVLKDVAQVIRRCVR-EMDTVCRYGGEEFVVLMPGSLLEQAEQAAERIRRAVSGMIS 262 Query: 402 ------LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ S+G + ++ AD+ LY +K++GR ++ Sbjct: 263 GPDSRPVTVSLGCSEYEMDEDALQVLHRADKALYGAKRSGRNRV 306 >UniRef50_A1TX96 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TX96_MARAV Length = 339 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 19/241 (7%) Query: 217 VFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFER---V 273 + +L C + FF + G + ++ ++ + + + V Sbjct: 85 IVGDPGLFWLYPCLVTTFFLVGPRIAVGINLSAILAMMVVGLAFSSQEQMWSFSTTAVVV 144 Query: 274 LDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK---ALPEKGG---YLCLFD 327 F+ + + + A +D LT R+S DE+L A E+ G L L D Sbjct: 145 SACAYVFAHRNHSQRRRLEQLATIDPLTGVKNRRSMDEELDVAAANAERSGLPYALVLLD 204 Query: 328 VDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT------ 381 +D FK IND +GH +GD+VL ++V +L+S +++R+GG+EF ++ G Sbjct: 205 IDHFKKINDEYGHGVGDDVLTELVALLESNTRR-SDQLFRYGGEEFVLLLPGVDGVNLRA 263 Query: 382 -LEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + L +L++ + G ++ S GVA +V+ AD LY +K+ GR +I Sbjct: 264 VMNNLQQVLRKYLKHPGG--PVTASFGVALLGHGESVDSWLARADNALYTAKETGRDRIV 321 Query: 441 W 441 + Sbjct: 322 Y 322 >UniRef50_A6VEW2 Ggdef domain protein n=8 Tax=Pseudomonas RepID=A6VEW2_PSEA7 Length = 668 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 18/202 (8%) Query: 256 NRGIVEKEAIINNHFERVLDGGLFF---SAADVKKLYSMYNSAFLDDLTKAMGRKSFDED 312 R E E ++ + +++ + A L A D LT R + E Sbjct: 466 QREQAEHEQEVSGRLQALMERVNSMEQDAKAFHTHLEDQRQKALTDPLTGLPNRAALSER 525 Query: 313 LKALPEKGGY------LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY 366 L+ + L + D+D FK IND FGHL GD+VL + L+ ++ + Sbjct: 526 LEQEVARRRRDGGELLLAVLDIDHFKRINDDFGHLAGDKVLKIIAGELRKRLR-QADFIA 584 Query: 367 RFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVE 418 RFGG+EF V+ L+ +L+ + HF+ ++++ S G+ E Sbjct: 585 RFGGEEFVVLLPATPLDAGRQLLERLRAAIAACPFHFKGEPLSITCSAGITAFVGNEAGE 644 Query: 419 RLKMLADERLYKSKKNGRAQIS 440 AD+ LY++K+ GR ++ Sbjct: 645 AAFERADQALYRAKRAGRDRLE 666 >UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BRN6_9GAMM Length = 504 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 20/170 (11%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKNINDTFGHLLG 343 + A D LT A R+ FDE L E + L D+D FK +ND +GH G Sbjct: 333 QLQEMARRDPLTGAYNRRYFDEMLSQRFEAATRHQQPLSLGFLDLDHFKMVNDRYGHQAG 392 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV-HFQVGS--- 399 D VL V K + S++ D + R+GG+EF ++ LE IL+ I H + Sbjct: 393 DVVLAGVAKAISSRLRGD-DFLARYGGEEFVLLLPNTNLELAQRILERIRAHIETEEHTV 451 Query: 400 -----INLSTSIGVAHSNECPTV----ERLKMLADERLYKSKKNGRAQIS 440 I ++ S G A + + + L AD LY +K+ GR ++ Sbjct: 452 APEHMIRITLSAGAAAHMDGSRISNKLDDLIRAADRALYLAKRQGRNRVE 501 >UniRef50_Q0EZJ8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZJ8_9PROT Length = 411 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 16/172 (9%) Query: 284 DVKKLYSMYN-------SAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNIND 336 +++KL M + A D LT R+ E L +L + + + DVD FKNIND Sbjct: 236 NMEKLTEMSDNLARAKLDARNDPLTGLANRRHLAEFLNSLGKNSFCVVICDVDNFKNIND 295 Query: 337 TFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF- 395 T+GH GDE+L ++ IL R GG+EF +++ L+ + + + + H Sbjct: 296 TYGHDAGDEILRQLAAILLGSTRS-TDLAARIGGEEFCIVFPDTDLQSCVGMAESLRHSV 354 Query: 396 -------QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 G I ++ SIG+A E AD+ LY+SK+NGR Q+S Sbjct: 355 DLQPLKTAAGDIAVTISIGLAPHKEDENHAATFKAADKALYQSKENGRNQVS 406 >UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=2 Tax=Desulfovibrio RepID=B8DIR5_DESVM Length = 474 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 14/191 (7%) Query: 264 AIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK---- 319 A + F ++ L+++ + + A D LT R +E + E+ Sbjct: 286 ARVAGFFALLVGVVLWYNRRLKRMNAVLERLARTDPLTDLPNRSRLNELFRREVERAQRY 345 Query: 320 --GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIY 377 + + D+D FK +ND GHL GD L +++ + V R+GG+EF V+ Sbjct: 346 RRPFSIVILDIDHFKRVNDELGHLAGDRTLQVFAGVVRDSVR-GTDTVGRWGGEEFLVLC 404 Query: 378 TGGTLEELLSILKEIV------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKS 431 T EE + + + + F+ G I+ + S GVA E +V+ L AD LY++ Sbjct: 405 PETTAEEAVQLAERLRGSLRATQFEGGRIH-TLSAGVAAFREGDSVDTLLHRADTALYRA 463 Query: 432 KKNGRAQISWQ 442 K GR ++ + Sbjct: 464 KNGGRDRVEVE 474 >UniRef50_Q21FP0 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FP0_SACD2 Length = 498 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 14/194 (7%) Query: 262 KEAIINNHFERVLDGGLFFSAADV-KKLYSMYNSAFLDDLTKAMGRKS----FDEDLKAL 316 E N ++L G L + K + A D LT R++ D++ Sbjct: 296 SELEAKNEQLQLLVGKLAAIQGAIEDKNRKLEYLASRDPLTDCYNRRAMRERLDDEFAKA 355 Query: 317 PEKGGYL--CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFA 374 G L + D+D FK +NDT+GH +GD V+ V +++K + D V RFGG+EF Sbjct: 356 QNSGKDLVCIMLDIDHFKRVNDTYGHGVGDVVIKMVAQVVKEAVR-DSDIVARFGGEEFC 414 Query: 375 VIYTGGTLEELLSILKE----IVHFQVGSINLSTSIGVAHSN-ECPTVERLKMLADERLY 429 V+ T+E++ I K I G + +++S G+A + + L ADE LY Sbjct: 415 VVLPNATVEQVKIIAKRCRMTIETQNCGGVKVTSSFGIAALSLGAKSPNDLIHQADEALY 474 Query: 430 KSKKNGRAQIS-WQ 442 SK+NGR +S WQ Sbjct: 475 NSKQNGRNMVSVWQ 488 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 19/224 (8%) Query: 232 IIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSM 291 + + + +I+ L L+ +G E I + + L + A++K + Sbjct: 539 LPLASLCIPLIAQGETLGLLFLCTFKG--EILPDIRQQLAKTVAEQLALAIANLKLREQL 596 Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNINDTFGHLLGDE 345 + D LTK R+ ++ L + + + DVD FK ND+ GH GD Sbjct: 597 EEQSLRDPLTKLFNRRYLEQRLSQELARAKRHHYSVGVLMIDVDHFKRFNDSLGHDAGDR 656 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL--------LSILKEIVHFQV 397 +L + +LK+ I R+GG+E +I TLEE +I + + + Sbjct: 657 ILASIGTLLKNNIRT-SDVACRYGGEEITIILPDATLEEASQKAEFLRQAIAEMKIEYSG 715 Query: 398 GSIN-LSTSIGVA-HSNECPTVERLKMLADERLYKSKKNGRAQI 439 +N ++ S GVA + + T + + +AD+ LY +K+ GR ++ Sbjct: 716 KIVNSVTASFGVACYPDHGETGQEIIQIADKALYDAKQAGRNRV 759 >UniRef50_A6WMZ7 Diguanylate cyclase n=3 Tax=Shewanella baltica RepID=A6WMZ7_SHEB8 Length = 325 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 16/239 (6%) Query: 216 YVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLD 275 Y YK +Y+ I FF + S LY +++ VE ++ D Sbjct: 84 YEIGYKGLIYISPTVFIFFFLFNLKSSLILSTLYACISLVSALQVESVELVLRFSVATFD 143 Query: 276 GGLF---FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLF 326 +F F+ K+ ++ + A D+LT A+ RK L+ + L L Sbjct: 144 CIIFAAIFAHIINKQRQALVHLANTDELTGALNRKQLKTKLELSVYEYQQQQIPASLLLI 203 Query: 327 DVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELL 386 D+D FK +ND FGH++GD++L K + ++ +I D ++RFGG+EF ++ E Sbjct: 204 DIDFFKMVNDNFGHIMGDQLLNKFSQHIQKKIRKD-DLLFRFGGEEFLILLPNTQFESAA 262 Query: 387 SILKEIV------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + +++ HF ++ SIGVA + T++ D LY +K GR + Sbjct: 263 IVAEDLRRSIEEQHFLDQHTQVTCSIGVADLRQADTLDTWLKTCDNLLYNAKNAGRNCV 321 >UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WIR5_CHLAA Length = 589 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 17/169 (10%) Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVDKFKNINDTFGH 340 + + + A D+LT R+ F + L E+ + + DVD FK INDTFGH Sbjct: 410 RFAQIQSQAITDNLTGLANRRHFLQVLHQEMERNRRYHTPVSIAMIDVDHFKQINDTFGH 469 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI-------- 392 + GD VL ++ + + Q+ D + R+GG+EF +I T E+ L + + Sbjct: 470 IAGDYVLREIARRCRQQLR-DVDVLARYGGEEFGLILPETTYEQALKATERLRTVLATTP 528 Query: 393 VHFQVGSINLSTSIGVAHSNEC--PTVERLKMLADERLYKSKKNGRAQI 439 + IN + SIGVA + P L AD LY +K+ GR ++ Sbjct: 529 IMIDGRQINPTISIGVASFHPTVYPDPSSLIADADRALYLAKQQGRNRV 577 >UniRef50_C4RZH3 Putative uncharacterized protein n=4 Tax=Bacteria RepID=C4RZH3_YERBE Length = 431 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 13/174 (7%) Query: 278 LFFSAADVKKLYS-MYNSAFLDDLTKAMGRKSFD---EDLKALPEKGGY---LCLFDVDK 330 + + K+L + ++A D LT R+ F E A ++ G+ L L DVD Sbjct: 256 IIHDITEQKRLEQALEHAALRDPLTDLGNRRQFFPLVEHAHAQSQRYGHCFSLILLDVDH 315 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK 390 FK+IND GH GDEVL+ + + L I + V+R+GG+EF ++ LE L + + Sbjct: 316 FKSINDQLGHNKGDEVLILLARTL-ESIIRESDSVFRWGGEEFTILLPLTHLEGALQLAE 374 Query: 391 EIVHF-----QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 I Q L+ SIGVA + L DE LY++K +GR ++ Sbjct: 375 SIRETIQMICQPNLPQLTVSIGVAQHQSGEDTDSLFKRMDEALYRAKASGRNRV 428 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 17/189 (8%) Query: 267 NNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY---- 322 R + L + A+VK + D LT R+ +E L+ + Sbjct: 1058 KRQLARTVVEHLAIALANVKLQEKFKAQSMRDALTGLFNRRYLEESLEQEIHRARRNHYS 1117 Query: 323 --LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 + + D+D FK ND FGH GDEVL V ++L+ I R+GG+E +I Sbjct: 1118 VGIVMIDIDHFKRFNDQFGHDAGDEVLKTVARLLQGSIRS-SDIACRYGGEELTLILPEA 1176 Query: 381 TLEELLSILKEIV--------HFQVGSI-NLSTSIGVA-HSNECPTVERLKMLADERLYK 430 +L + + ++I H++ S+ +++ S GVA T+E + +AD LY+ Sbjct: 1177 SLSDTQARSEQIRYMIEHLQLHYENQSLGSITASFGVACFPEHGETLEAVLRIADTALYQ 1236 Query: 431 SKKNGRAQI 439 +K GR ++ Sbjct: 1237 AKALGRNRV 1245 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 15/174 (8%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKN 333 F + + A +D LT + R++ E ++ E+ L D+D+FK Sbjct: 276 FLKELREAQEKLVEMATIDSLTGLLNRRAGLERVEEELSRHQRSERAFACLLLDIDRFKK 335 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI- 392 INDT+GH GD VL + L+ + V R+GG+EF ++ + + ++I Sbjct: 336 INDTYGHQAGDAVLSEFGATLRRHVR-KHDIVCRYGGEEFLLLLPDTSPSAARTTAEKIR 394 Query: 393 -------VHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + F I ++TSIG++ T + + AD LY++K +GR ++ Sbjct: 395 AVTAATPIMFAGRQIAVTTSIGISMMQGDETAKAMIARADAALYEAKNSGRNRV 448 >UniRef50_D2C2R9 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech586 RepID=D2C2R9_DICD5 Length = 501 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 15/165 (9%) Query: 288 LYSMYNSAFLDDLTKAMGRKSFDEDLKALP------EKGGYLCLFDVDKFKNINDTFGHL 341 + A D LT M R++F+ + L ++ + L D+D FK IND +GH Sbjct: 333 QRRLELMATTDKLTGLMNRQAFEYIFRTLRMKQSAQQRTFSIILIDLDFFKKINDQYGHH 392 Query: 342 LGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------V 393 +GD VL+K ++++ I R+GG+EF ++ +L + + ++I V Sbjct: 393 IGDRVLVKTARLIQRAIR-KTDSACRWGGEEFVLLLGDCSLHQAHRVAEKIRQAVHFALV 451 Query: 394 HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 + INL+ S GVA SN +++ L AD+ LY++K+ GR Q Sbjct: 452 SHRHQVINLTISCGVAESNPGESIDHLVQRADKALYQAKRQGRDQ 496 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 15/165 (9%) Query: 289 YSMYNSAFLDDLTKAMGRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLL 342 + + A +D LT R+ D L+ E+ + + D+D FK INDT GH+ Sbjct: 133 HKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIMMLDIDHFKEINDTHGHIC 192 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI-- 400 GD L K+ ++L + + R+GG+EF I + E+ L + + S Sbjct: 193 GDYTLRKISELLLELVRT-SDILGRYGGEEFCCILPETSFEQALVLAERCRTQVAASQFS 251 Query: 401 ------NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ SIGV + T++ + AD+ LY++K+ GR ++ Sbjct: 252 CTDHQSRVTVSIGVTDLHRDDTLDSIIKRADDALYQAKRTGRNRV 296 >UniRef50_Q1MZ89 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q1MZ89_9GAMM Length = 577 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 15/167 (8%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVDKFKNINDTFG 339 ++L A D LT R ++D + E+ L + DVDKFK+INDT+G Sbjct: 389 EQLNQSQLKAMTDSLTGLPNRGAYDVYAQQEYERYKRYGGELSLIVCDVDKFKSINDTYG 448 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV------ 393 H GD+VL + + +K + + R+GG+EF V+ E+ +S+ ++I+ Sbjct: 449 HQAGDKVLQLISRQVKKGTR-ETDLLARYGGEEFVVLLPETKQEDAVSVAEKIIEAVATS 507 Query: 394 --HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 HF+ + ++ S GVA + E++ AD LY++K+NGR Q Sbjct: 508 PFHFRGKRVQITISCGVASFKKGYRPEQVFDAADAALYRAKENGRNQ 554 >UniRef50_A1U2H0 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U2H0_MARAV Length = 630 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 122/319 (38%), Gaps = 31/319 (9%) Query: 151 RSLIFLLGLERFSLL-SKSLAMD--SENLMFSLFKNGKPVTGDEYNAKNAIFT----VSE 203 +L LL ++ +L S +A S LM S+ + K Y +F + Sbjct: 298 LALAGLLIPYQWLILPSILVAFVGCSTMLMLSVVRWIKKDPAARYYTVAWVFMLFGGIVL 357 Query: 204 AMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAV------ISGASCLYLVRRVINR 257 A+ F LP L + V + +++ A + A L R Sbjct: 358 ALSKFTMLPRNL-LTENATQVGSALGVILLSIALADRLNREKKKSFAAQQKLLREERKAR 416 Query: 258 GIVEKEAIINNHFERVLDGGLFFSAADVKKL-YSMYNSAFLDDLTKAMGRKSFDEDLKA- 315 EK I +L+ + D++ L + + D LT R FD+ ++ Sbjct: 417 LAQEKSLRIQQEANALLEERVQERTRDLEILNEQLLELSATDPLTGLKNRGHFDKKFQSD 476 Query: 316 -----LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGG 370 E+ L + D+D FK NDT+GHL+GD+ L V +K + + R+GG Sbjct: 477 VVHAYRFEETLSLLIVDIDHFKGFNDTYGHLVGDDCLKMVADCIKQHVTRPQDLAARYGG 536 Query: 371 DEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAH--SNECPTVERL 420 +EF V+ + + I ++L+ SIGV ++ + L Sbjct: 537 EEFVVLLPDTPEAGACRVAELIREDIQKMAFRVSDQVLHLTVSIGVCSCAPSQADATKAL 596 Query: 421 KMLADERLYKSKKNGRAQI 439 AD LY++K GR ++ Sbjct: 597 FACADGALYRAKAEGRNRV 615 >UniRef50_A4VQF4 GGDEF domain protein n=3 Tax=Proteobacteria RepID=A4VQF4_PSEU5 Length = 466 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 12/183 (6%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE------KGGYL 323 F +L LF+ + + + D LT R + D E + + Sbjct: 277 FSAMLLTSLFWIRRLRRLNDQLRIKSQTDSLTGLANRAALDRRFATALEQARRYRRPLSI 336 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 + D+D FK IND FGH +GD VL +L + V R+GG+EF V+ + Sbjct: 337 VMLDIDHFKRINDDFGHQMGDRVLRDFAALLDDCLR-GSDAVGRWGGEEFLVLCPETSGP 395 Query: 384 ELLSILKEIVHFQ-----VGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 + + + + ++ + S GVA + T + L AD LY++K GR + Sbjct: 396 QAVQFAERLCEQARAFPFATGVSQTLSAGVAELSPSDTPDSLLRRADAALYRAKHEGRDR 455 Query: 439 ISW 441 + W Sbjct: 456 VCW 458 >UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n=3 Tax=Zymomonas mobilis RepID=Q5NP17_ZYMMO Length = 1008 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 105/253 (41%), Gaps = 15/253 (5%) Query: 202 SEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVE 261 S +++LP G + FA + + ++ + ++ +I ++ Sbjct: 756 SVPFVIYSHLPAGHFTFALRATIPGIKQPILETHFPVNVEYRWYEYRFVKIALIIILVLF 815 Query: 262 KEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK------A 315 +I+N ++ + + + A D+LT + R++F E + + Sbjct: 816 LYDLISNQIRKLRLMITNKTLELQETNLRLKELANTDELTGLLNRRAFTEMFEKNCAQFS 875 Query: 316 LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAV 375 + + + D+D FK IND GHL GD V+ + + + I + R+GG+EF + Sbjct: 876 KTKDQFSVFILDIDFFKKINDNEGHLAGDAVIQYIAQKITENIR-QQDFAARYGGEEFVI 934 Query: 376 IYTGGTLEELLSILKEI--------VHFQVGSINLSTSIGVAHSNECPTVERLKMLADER 427 + +E + I V +Q I ++ SIGVA E L ADER Sbjct: 935 MLPNADMETTCQVASRIGNAISEKPVPYQGREIPVTVSIGVAVMKENDDANSLLERADER 994 Query: 428 LYKSKKNGRAQIS 440 LY +K GR ++S Sbjct: 995 LYMAKNQGRNRVS 1007 >UniRef50_C1CWH3 Putative Diguanylate cyclase (GGDEF domain protein) n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWH3_DEIDV Length = 382 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 15/258 (5%) Query: 196 NAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVI 255 N F V T + Y + L +F + ++ A L + ++ Sbjct: 115 NHQFRVFAPQYGVLSQSTYWFAVLYVAAFLIFPTRLAKYFVRALLGLTIAITLSHL--LL 172 Query: 256 NRGIVEKEAIINNHFERVLDGGLFFSAADV-----KKLYSMYNSAFLDDLTKAMGRKSFD 310 + ++ ++ + +L G + S +L +M A D LT A R++ + Sbjct: 173 SPELLRGRELLGGIIQFLLAGVVLTSMQSRFGTLRDRLNAMQVVASHDALTGAANRRAAE 232 Query: 311 EDLKALPEKG--GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRF 368 E L+ L G + LFD+D FK +ND GH GD VL+ V + + +P D R+ Sbjct: 233 ERLQTLHRAGERYTVILFDIDHFKRVNDEHGHATGDLVLVNVTRCARQLLP-DSAFFARW 291 Query: 369 GGDEFAVIYTGGTLEELLSILK----EIVHFQVGSIN-LSTSIGVAHSNECPTVERLKML 423 GG+EF +I EE+ +L+ E+ + G ++ GVAH T E + Sbjct: 292 GGEEFLIILPSLPKEEVYELLRTLRAELRNQTFGPQKGVTACFGVAHVRPGETPEEIVAR 351 Query: 424 ADERLYKSKKNGRAQISW 441 ADE +Y K GR + + Sbjct: 352 ADEAMYARKNRGRNGVEF 369 >UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV3_9DELT Length = 519 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 20/187 (10%) Query: 265 IINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA------LPE 318 II HF ++L+ + L A D LT R+ F E L Sbjct: 328 IIARHFNKLLEVV-------ERLLREKDQLAGTDQLTGLNNRRRFKELLDQELIRYRRIP 380 Query: 319 KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT 378 K L +FD+D FK +NDT+GH GD VL ++ ++L++ + R+GG+EF V+ Sbjct: 381 KPLSLLIFDIDHFKRVNDTYGHETGDLVLKEMAQLLQATVRR-TDTPARWGGEEFLVLLP 439 Query: 379 GGTLEELLSILKE----IVHFQVGSI-NLSTSIGVAHSNECPTVER-LKMLADERLYKSK 432 T E +++ ++ I + ++ S GVA ++ E L D+ LY++K Sbjct: 440 ATTAEAAMALAEKLRQAIEEHDFPRVGRVTASFGVAAFHDGEQEESALLRRVDKALYQAK 499 Query: 433 KNGRAQI 439 + GR ++ Sbjct: 500 RQGRNRV 506 >UniRef50_A8TQW5 GGDEF domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQW5_9PROT Length = 360 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 22/204 (10%) Query: 258 GIVEKEAIINNHFERVLDGGLFFSAADVKKLYSM----YNSAFLDDLTKAMGRKSFDEDL 313 G + E + L G L SA ++ +L A D LT R F+ +L Sbjct: 137 GSLVHETRVMEARNARLHGRLERSAEEIARLRKSLVATRREASTDGLTGLANRMQFEREL 196 Query: 314 KALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 ++ K L + D+D FK NDT+GH++GD+VL V ++L I R Sbjct: 197 RSAAAKAMEDGTTLCLLMADIDHFKTFNDTYGHMVGDQVLRLVGRVLIEAIR-PGDLAAR 255 Query: 368 FGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI-----------NLSTSIGVAHSNECPT 416 FGG+EF V+ L+E I + I ++ S+GV Sbjct: 256 FGGEEFVVVLPECRLDEAARIAERIRERIGEKHVVRRSSGDDLGTVTLSLGVTAYQPGEV 315 Query: 417 VERLKMLADERLYKSKKNGRAQIS 440 V +L AD LY +K+ GR +++ Sbjct: 316 VGQLIERADTGLYDAKQAGRNRVA 339 >UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms RepID=A8I8X7_AZOC5 Length = 510 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 126/389 (32%), Gaps = 77/389 (19%) Query: 84 DSVSPSYLYDVGPYL--ISSDECI----QVKEFEKNY------------CADIMQVVKYR 125 D + LY P+ + + C+ ++ + N+ ++ + Sbjct: 150 DQPATG-LYLSRPFRNRLDQEPCVALSRRLTDSHGNFAGVLAILVPLQSVREMFASLTRH 208 Query: 126 HVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGK 185 I DG V + GL F + F Sbjct: 209 RSDAISLIRLDGTILVRQP-----DLGSFGGFGLNVFGRPN-----------FQRMTTTP 252 Query: 186 PVTGDEYNAKNAI--FTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVIS 243 + + + + + V + + + + ++ ++ Sbjct: 253 QGSFTSTSEIDRVKRYYVFSRVGDLPLIVVVGVGMDAVTAPWQAQWLAGAATSVVLCLLI 312 Query: 244 GASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKA 303 + + L R ++ R +E+E + + D LT Sbjct: 313 LGAAVALRREMLRRFEIEQEFL---------------------------RLSQTDSLTGL 345 Query: 304 MGRKSFDE------DLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQ 357 R+ FDE A + + D+D FK +ND GH GD VL +V I+++ Sbjct: 346 PNRRHFDEFGQREWQRAARQRSSIAVLMVDIDHFKQVNDRIGHPGGDRVLREVSDIIRAS 405 Query: 358 IPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV-----HFQVGSINLSTSIGVAHSN 412 + R+GG+EFA+I + + I + G ++ SIG+A Sbjct: 406 LHRPGDFAGRYGGEEFAIILPETDAPAAAHVAERIRAAIEANTAEGVAPVTVSIGLAAGL 465 Query: 413 ECP--TVERLKMLADERLYKSKKNGRAQI 439 P T+ + + AD LY++K+ GR ++ Sbjct: 466 AAPKGTLAEMMIAADHALYRAKETGRNRV 494 >UniRef50_B1Y766 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y766_LEPCP Length = 381 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 16/168 (9%) Query: 288 LYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHL 341 L + A D+LT R+ L E+ + + D+D FK IND +GH Sbjct: 208 LLRVEQLAERDELTGLPNRRRMQAALAEERERCSRNGVSFSVAMLDIDHFKRINDLYGHP 267 Query: 342 LGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT-LEELLSILKEIVHFQVGS- 399 +GD VL V +++++ + V R GG+EF +I G LEE +++ + G+ Sbjct: 268 MGDAVLRSVAQLMRTALRKP-DLVGRVGGEEFLMILPGAARLEEAKHVVERVRAAIEGND 326 Query: 400 -------INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + ++ SIGVA +VE L AD LY +K+ GR Q++ Sbjct: 327 WSATRADLQVTASIGVAVGEPGESVESLFDRADRGLYLAKQGGRNQVA 374 >UniRef50_Q3A5K1 Two component signal transduction response regulator n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5K1_PELCD Length = 323 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 94/240 (39%), Gaps = 33/240 (13%) Query: 211 LPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHF 270 LP L+ ++D+++ + + + CL + + E I H Sbjct: 80 LPVLLFSSGDERDLWMAGMEIGV-----------SECLP-----MGLPMEEHRIKIRWHL 123 Query: 271 ERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLC 324 + A + + A D LT R FD + + L Sbjct: 124 KNRER-----IHALHQAQSQLARIALTDSLTGLYNRAYFDATITQEVARCSRRGLPLSLL 178 Query: 325 LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEE 384 + D+D FK INDT+GHL GD+ L V +LK Q V RFGG+EFAVI T Sbjct: 179 MVDLDHFKKINDTYGHLAGDQALAAVALVLKEQ-SRISDTVCRFGGEEFAVILPETTNAN 237 Query: 385 LLSILKEIVHFQVG---SINLSTSIGV--AHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ + I + ++ SIGV A + L AD LY++K GR ++ Sbjct: 238 AATVAERIRKKISQLDLAFPVTASIGVGSAKVTNQLLPDHLIAEADGALYEAKSQGRNRV 297 >UniRef50_C6NZP2 Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZP2_9PROT Length = 570 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 17/225 (7%) Query: 231 LIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLD--GGLFFSAADVKKL 288 +F + G + L + ++ R A E L G + + L Sbjct: 341 YFLFATFFGMLGVGVTALAVWGKIPFRPYTFHAAEFGLVIEATLLALGLSNWMRENRDAL 400 Query: 289 YSMYNSAFLDDLTKAMGRKSFDEDL------KALPEKGGYLCLFDVDKFKNINDTFGHLL 342 Y A LD LT R++F E E+ L + D+D FK+IND +GH Sbjct: 401 YEAEQVARLDALTHLNNRRAFMELALPYASTAGRHERPMSLVMMDIDHFKSINDQYGHQT 460 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE----IVHFQVG 398 GD VL V +LK+ V R+GG+EF ++ L++ ++ + I F++ Sbjct: 461 GDLVLTAVADLLKN-FSRTSDIVARWGGEEFILLLPETGLKQAINHAERLRQAIAEFRIP 519 Query: 399 ----SINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 SI+L+ S G+A + +++ AD +LY++K++GR ++ Sbjct: 520 VGETSISLTASFGIAAHVANLSFDKMIEQADVQLYEAKRSGRNKV 564 >UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM57_9PROT Length = 461 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 18/201 (8%) Query: 257 RGIVEKEAIINNHFERVLD-GGLFFSAADVKKLY-SMYNSAFLDDLTKAMGRKSFDEDLK 314 R +V +A + + R++ G+ + +L + A D LT R++F + Sbjct: 257 RRMVLHKAKMWDASNRLIGVTGVMVDVTESHRLRQELERLATTDPLTGLSNRRAFLMRAR 316 Query: 315 ALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRF 368 E+ + + DVD FK++ND +GH +GD VL V ++ + RF Sbjct: 317 EEVERAVRHDRPMSVVMIDVDHFKSVNDRYGHDIGDLVLQDVAATVQGALRNSGDVAARF 376 Query: 369 GGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIGV-AHSNECPT-VE 418 GG+EF ++ T+ + + I V + G++ + S GV ++ T ++ Sbjct: 377 GGEEFVLLLPETTVSGAQQLAERIRVAFERTAVETEQGAVRFTASFGVDVFRSDMDTGID 436 Query: 419 RLKMLADERLYKSKKNGRAQI 439 + AD+ LY++K+ GR ++ Sbjct: 437 TVLKRADDALYRAKEAGRNRV 457 >UniRef50_Q21ED1 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21ED1_SACD2 Length = 476 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 68/258 (26%), Positives = 99/258 (38%), Gaps = 31/258 (12%) Query: 213 TGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFER 272 T L + T I F AA + G + LV I + HF Sbjct: 202 TASLAVYASGLPLLYLLTGICFMAAYRLSLFGVIVVNLVIATITSSAYMWQVGPGAHFAA 261 Query: 273 VLDGGLFFSAADVKKLYSM-------------------YNSAFLDDLTKAMGRKSFDEDL 313 + GL + S+ A LD LTK R+ F+E Sbjct: 262 PIQLGLIQLFLAFNMVISLVFWCTQSRNRELSVKWSRAETQARLDPLTKIYNRRGFEERA 321 Query: 314 KAL--PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGD 371 L ++ L + D+D FK +ND +GH +GDEVL + K + I D R GG+ Sbjct: 322 IQLMRQKRTLSLLILDIDHFKYVNDHYGHDIGDEVLRQFSKKIAGMIR-DSDVFARIGGE 380 Query: 372 EFAVIYTGGTLEELLSILKEIVH---------FQVGSINLSTSIGVAHSNECPTVERLKM 422 EFAVI LE + + I +I + SIGV+ +E + R Sbjct: 381 EFAVILADQNLELAGLMAERIRATIESTELPVSSDNTIKYTVSIGVSSVSEGVDIHRWLK 440 Query: 423 LADERLYKSKKNGRAQIS 440 D+ LY++K GR Q++ Sbjct: 441 TTDKLLYQAKAQGRNQVA 458 >UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXI5_MARAV Length = 523 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 17/166 (10%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKNINDTFGHLLG 343 + ++ D LT R+ FDE + E + L +FD+D FK ND GH G Sbjct: 354 ELQRFSYEDSLTGLKNRRYFDELFRHEREVSARSDRPLCLLIFDIDHFKLFNDCHGHEAG 413 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK--------EIVHF 395 D+ L V +L + V R+GG+EF+V+ G +L+E + E V Sbjct: 414 DQALRMVGDVLATCFR-GSDTVCRYGGEEFSVLMPGASLDEARQRAEQLRAAISAEPVEH 472 Query: 396 QVGSI-NLSTSIGVAHSNE-CPTVERLKMLADERLYKSKKNGRAQI 439 + ++ +L+ S G+A E CP + L AD+ LY++K+ GR ++ Sbjct: 473 RGENLGSLTISAGIACWRENCPEFDELFRAADQALYQAKETGRNRV 518 >UniRef50_D1U8T8 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U8T8_9DELT Length = 326 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 18/220 (8%) Query: 237 ALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAF 296 A++ A + + ++ + R + L + + + Sbjct: 93 AILDQAFAAGASDYIVKPVSAIELRARVRSALQLRREMVKRLLRERELERLARKLERMSN 152 Query: 297 LDDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNINDTFGHLLGDEVLMKV 350 LD LT R+ FD+ L + G L + D+D FK+ ND GH+ GD L +V Sbjct: 153 LDSLTGLANRRCFDDTLVKEWVRNGRADAHLGLIMIDIDHFKHYNDALGHVDGDTCLRRV 212 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSIN- 401 + +K + V R+GG+EFAVI G +++ I + +++ Sbjct: 213 AEAIKGVVHRPGDMVARYGGEEFAVILPGTDYTGAMAVADNIHASVAQTSIEHPDSAVSC 272 Query: 402 -LSTSIGVAHSNE--CPTVERLKMLADERLYKSKKNGRAQ 438 ++ SIGV+ T E+L AD LY++K+ GR + Sbjct: 273 VVTVSIGVSSGIPTCGSTPEQLIQAADRALYEAKEAGRNR 312 >UniRef50_A9D3L2 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D3L2_9RHIZ Length = 257 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 27/225 (12%) Query: 229 CTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKL 288 F +A+++ +S LV ++ G+ E+ + R + L + Sbjct: 43 AARFAFMSAILSGLSIFCAATLVFPLMASGLREQGKL------RKMTESLSV------RS 90 Query: 289 YSMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTFGHLL 342 S+ ++A D +T R+ FDE L K + +FD+D FK +NDT GH + Sbjct: 91 QSLEHAAVTDSMTGLYNRRYFDEALGEYLNAFRSINKPIGMVIFDLDHFKQVNDTHGHDV 150 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VH 394 GDEVL +V + L V R GG+EFA++ + +L S+ I V Sbjct: 151 GDEVLRQVAECL-HMFTRYHDVVARLGGEEFAILSPNISDRQLRSLADRIRLAVSQLTVE 209 Query: 395 FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ ++ S G+A + + L AD +LY++K+ GR ++ Sbjct: 210 SGNVALRVTISAGIAIWDGTERGDELYRRADRQLYEAKRQGRNRV 254 >UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KB78_CYAP7 Length = 547 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 24/196 (12%) Query: 267 NNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------G 320 N E + + L + K+L + +LD+LT R+ FD L+ + Sbjct: 337 NLEQEDIFEPRLIKLTQENKRLRKL---VYLDELTGIYNRRYFDHYLEREWRRMTREKAP 393 Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 L L D+D FKN NDT+GH LGD L KV + ++ + V R+GG+EFA+I + Sbjct: 394 LSLMLLDIDYFKNYNDTYGHQLGDACLKKVAQAIQKSLKRSTDIVARYGGEEFAIIISQC 453 Query: 381 TLEELLSILKEIVHFQVGSINL------------STSIGVAHSNECPT--VERLKMLADE 426 + L L EI+ Q+ S+ + + SIGVA + L +ADE Sbjct: 454 DNKGAL-FLAEIIREQIKSLAINHKNSQVNLKIVTASIGVATIIPALETQPKMLIQMADE 512 Query: 427 RLYKSKKNGRAQISWQ 442 LY+SK GR +++++ Sbjct: 513 ALYQSKHEGRNRVTFR 528 >UniRef50_Q1ZGY5 GGDEF domain protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGY5_9GAMM Length = 493 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%) Query: 246 SCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMG 305 S +++ ++ + + + ++ + + K L A LD LTK Sbjct: 274 SMDVMLKEQESKHEDDMQEKFQDMIRQIKELK-SETQNYQKTLKQQSELAHLDFLTKIPN 332 Query: 306 RKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIP 359 R+++ E L + + + D+D FK IND FGHL GD+V+ V + LK + Sbjct: 333 REAWSERLTFEFSRYQRYQNPLKIAIIDMDHFKRINDQFGHLAGDKVINVVAQTLKKSLR 392 Query: 360 VDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIGVAHS 411 + + R+GG+EFA++ T E+ + +L+++ F+ +I+++ SIG A Sbjct: 393 -NTDFIARYGGEEFAILLPEITNEQAVDVLQKLCAKIASIPFKFKKDNISITISIGCASF 451 Query: 412 NECPTVERLKMLADERLYKSKKNGRAQISW 441 ++ ++ AD LYK+K GR Q+ + Sbjct: 452 DKGDNIDSAFERADNALYKAKNGGRNQVVF 481 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 19/168 (11%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVDKFKNINDTFGHLLG 343 + A D LT+ + R++ E + A E+ L + D+D FK +NDT+GHL+G Sbjct: 323 RLEQLAQTDPLTQLLNRRALTERITAEMERALRYDSTLALLMIDLDHFKKVNDTYGHLVG 382 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI----------V 393 D+VL V ++L I R+GG+EF V+ ++ + I Sbjct: 383 DDVLRDVGQLLGHTIR-GSDITARYGGEEFLVLLPETDDAGAVAFAERIRVAMEEHPFAR 441 Query: 394 HFQVGSINLSTSIGVAHSNEC--PTVERLKMLADERLYKSKKNGRAQI 439 + L+ SIGVA VE L AD LY++K GR ++ Sbjct: 442 DSMAEPLKLTASIGVAVFPAARIENVEDLFARADAALYRAKAEGRNRV 489 >UniRef50_Q2SME0 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SME0_HAHCH Length = 427 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 15/168 (8%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFG 339 K+ + + D+LT R+ F+E++K L G L L D+D FK IND + Sbjct: 252 KQAEQLKELSIRDELTGLYNRRFFNEEVKVLHANALRYGNGFCLVLGDIDFFKRINDGYS 311 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH----F 395 H++GDEVL +V KIL + I + V R+GG+E + + + + +++ I Sbjct: 312 HVVGDEVLKQVAKILMNSIR-NSDIVARYGGEEMVLALPNTSPQAAMEMMERIRKTIEQH 370 Query: 396 QVGSI----NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 SI ++ S G+ E + +ADE LYK+K NGR Q+ Sbjct: 371 PWDSIAEGMKVTMSFGICDETNGEHFEHMLAVADELLYKAKNNGRNQV 418 >UniRef50_Q1IV91 Diguanylate cyclase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IV91_ACIBL Length = 453 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 75/345 (21%), Positives = 133/345 (38%), Gaps = 46/345 (13%) Query: 128 KNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLE----RFSLLSKSLAMDSENLMFSLFKN 183 G + + G + +N SL+ L + + L + + E L + Sbjct: 118 GGIGAMHYTGMAAMRSYAMHRYNPSLVLLSLVIAVAFSWMALRITFLLRREPGAHELRRM 177 Query: 184 GKPV---TGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA 240 G V G A+F V+ + + + + + V ++ F AL++ Sbjct: 178 GGAVLMGIGIASMHYTAMFAVTFERGNTEFSTVHTVPVTHIDQLGIVVMAGMVLFGALIS 237 Query: 241 VISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKK-LYSMYNSAFLDD 299 R ++R + ++N + L ++K+ + + + D Sbjct: 238 A--------YFDRQMSRDL-----RVSNERLAEMQVALLQREKELKEAVAKLEELSTRDG 284 Query: 300 LTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKI 353 LT R+ FD L A ++ L + DVD FK +ND +GHL+GD+ L KV K Sbjct: 285 LTGLYNRRFFDTTLTAECKRAARANYPISLLIIDVDCFKALNDHYGHLVGDDCLQKVGKS 344 Query: 354 LKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVG----------SINLS 403 L S + V R+GG+EFA+I + E +I + I +G ++ Sbjct: 345 LASAVRRTSDVVARYGGEEFALILPNTSEESATTIGENIRRAVLGLEIANANSTAGPFVT 404 Query: 404 TSIGVAHSNECP---------TVERLKMLADERLYKSKKNGRAQI 439 S+GV T + ADE LY++K+ GR ++ Sbjct: 405 LSVGVCTRRPSHPRSSEDILVTTNEIIRAADEALYRAKREGRNRV 449 >UniRef50_A4VRS9 GGDEF domain protein n=2 Tax=Pseudomonas RepID=A4VRS9_PSEU5 Length = 621 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 18/202 (8%) Query: 256 NRGIVEKEAIINNHFERVLD--GGLFFSAADVK-KLYSMYNSAFLDDLTKAMGRKSFDED 312 R E+E + ++++ G L +A ++ L A D LT R +++E Sbjct: 419 RRQRSEQEQKLGERLQQLVSRVGSLEQAARGLRGHLEEQRQKALQDPLTGLPNRAAWNER 478 Query: 313 LK---ALPEKGG---YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY 366 L A ++ G L + DVD FK +ND +GHL GD VL + L+ ++ + Sbjct: 479 LDLEFARWQRYGGDLLLAVLDVDHFKRVNDGYGHLAGDRVLKIIGTELQKRLR-KTDFIA 537 Query: 367 RFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVE 418 RFGG+EF V+ E +++ + HF+ + ++ S G+ T E Sbjct: 538 RFGGEEFVVLLPNTPYEAGRQLMETLRDSIGSCPFHFKGERVAITLSAGLTAFVTGDTAE 597 Query: 419 RLKMLADERLYKSKKNGRAQIS 440 R AD LY++K +GR ++ Sbjct: 598 RAFERADRALYRAKDSGRNRVE 619 >UniRef50_Q0ACB8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACB8_ALHEH Length = 437 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 27/255 (10%) Query: 212 PTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRR----VINRGIVEK--EAI 265 P L + Y+ + L T ++ + +G + ++R+ I R V E I Sbjct: 178 PAFLRMTGYRAEEVLGRTTAFLYTSHTDYEATGEAVYPVLRQGRTSEIEREFVRADGEVI 237 Query: 266 INNHFERVLD-----GGLFFSAADVKKLYSMY----NSAFLDDLTKAMGRKSFDEDLKAL 316 + R LD G + D+ + ++ A D LT A+ R+ ++ L Sbjct: 238 TVSLLGRPLDPCDLSQGFVWVLQDISERKALQDALEREATFDQLTGALNRRRIEQALARE 297 Query: 317 PEKGG------YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGG 370 E+ + L DVD FK +ND +GH +GD VL +++ K + + R+GG Sbjct: 298 MERSNRHGDALSVALLDVDHFKRVNDQYGHNVGDRVLQTLIRRCKENLRAV-DLIGRWGG 356 Query: 371 DEFAVIYTGGTLEELLSILK-----EIVHFQVGSINLSTSIGVAHSNECPTVERLKMLAD 425 +EF ++ L + + + + ++ S+G+A +++L AD Sbjct: 357 EEFLIVLPDTDRHSALQLAERLRARIAERARADTHGVTVSLGLASFRPGEGLDQLVKRAD 416 Query: 426 ERLYKSKKNGRAQIS 440 + LY++K GR ++ Sbjct: 417 DALYRAKDRGRNRVE 431 >UniRef50_A0YZR1 Putative diguanylate cyclase (GGDEF domain) n=2 Tax=Cyanobacteria RepID=A0YZR1_9CYAN Length = 328 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 24/210 (11%) Query: 251 VRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFD 310 +RR++ KE R L L + + A LD LT+ R+ FD Sbjct: 124 IRRILQTQWAMKELKKQIERSRTLTEQLETAN------QKLEQIAALDSLTQIANRRRFD 177 Query: 311 EDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGK 364 + L + ++ L L DVD FK NDT+GH GD L +V + + ++ Sbjct: 178 QGLHSEWKRLSRERLPLSLILCDVDFFKAYNDTYGHRAGDLCLQQVAQTICEKVQRPADL 237 Query: 365 VYRFGGDEFAVIYTGGTLEELLSILKEIVH----FQVGSIN------LSTSIGVAH--SN 412 V R+GG+EFA+I L+ + + ++I H ++ N ++ S+GVA N Sbjct: 238 VARYGGEEFAIILPNTQLQGAVKVAEDIRHSLHAIEIEHPNSRVSNFVTLSLGVASLIPN 297 Query: 413 ECPTVERLKMLADERLYKSKKNGRAQISWQ 442 + + L AD LY++KK GR ++ ++ Sbjct: 298 HYLSEDFLIGEADRALYEAKKAGRDRVVFR 327 >UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX81_9GAMM Length = 384 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 17/170 (10%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDL-------KALPEKGGYLCLFDVDKFKNINDTF 338 ++ + + D LT+ R+ E L + L + D+D FK+IND Sbjct: 213 QRESEVRQLSTTDPLTQVANRRHLLERLNLEISRCERSGHSELSLLMMDLDHFKSINDEH 272 Query: 339 GHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE------- 391 GHL GDE L ++L+ Q + V R+GG+EF ++ + L I + Sbjct: 273 GHLFGDEALRVTARVLREQ-SRNTDLVGRYGGEEFCLLLPDTGPQGALQIAERCRQALEQ 331 Query: 392 --IVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 I ++++TSIG+A T E L ADE LY++K+ GR +I Sbjct: 332 ADIDREDGEVLHITTSIGLATYQMGDTNESLLHRADEALYQAKEQGRNRI 381 >UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZV8_CHRVO Length = 383 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 20/199 (10%) Query: 257 RGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSF----DED 312 R ++E + R++ L + +Y A D LT+ R+ F D + Sbjct: 182 RSPSQEELALAQRITRIIAIALQRDGHE----KQLYRLATQDGLTELNNRRQFIELADRE 237 Query: 313 LKALPEKGG--YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGG 370 ++ G + + D+D FK+IND +GH +GDEV+ ++ + + R GG Sbjct: 238 IERSRRHGSRMSVLMMDLDHFKDINDHYGHAVGDEVIRHFSQVCREVLRA-SDLCGRLGG 296 Query: 371 DEFAVIYTGGTLEELLSILKEIVHFQ--------VGSINLSTSIGVAHSNECPT-VERLK 421 +EFA + L++ + + + GS+ + SIGVA + T ++ + Sbjct: 297 EEFAAVLPDTGLDDARQVAERLRSLASSARLSAVSGSLGYTVSIGVAERHADETDIDEVL 356 Query: 422 MLADERLYKSKKNGRAQIS 440 AD++LY++K++GR ++S Sbjct: 357 GRADKQLYQAKRDGRNRVS 375 >UniRef50_C1XPT0 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XPT0_9DEIN Length = 351 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 128/320 (40%), Gaps = 33/320 (10%) Query: 140 FVYYLYPVTHNRSLIFLLGLERFSLLSKSLA----MDSENLMFSLFKNGKPVTGDEYNAK 195 FV + YP SL +L L L + + L S + GD Sbjct: 35 FVRWTYPFFSALSLFWLWALLTRKLPVARIERQAILGIGLLFLSKYAYYFAFVGD----- 89 Query: 196 NAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVI 255 + V + A++ L + Y + + AV+ A + + + Sbjct: 90 --LRGVWAEIGATAWVFAFLMILFYLTSDSRAGLRYSVLLVLIAAVLGAARLIPDLYQ-- 145 Query: 256 NRGIVEKEAIINNHFERVLDGGLFFSAADVK--------KLYSMYNSAFLDDLTKAMGR- 306 R E A + + L + ++ K + ++ A D LT + R Sbjct: 146 GRHQAEFLAWLRDIVRLAAMAALLYVFSNAKDRLALAHQRARELHLLAHTDGLTGLLNRL 205 Query: 307 ---KSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKG 363 ++ ++ L A ++ + L D+D FK+IND FGH +GD+VL++V L+ + + Sbjct: 206 GATRALEDRLAA--QRPIAVVLADIDHFKSINDRFGHAVGDDVLIEVGVRLRDALR-EGD 262 Query: 364 KVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQV-----GSINLSTSIGVAHSNECPTVE 418 V R+GG+EF +I + L +++ + + G ++ S+GVA + Sbjct: 263 AVGRWGGEEFLMILESAEAGQALVLVERLQNRMHSRPFPGVGRVTVSLGVAVHQPGESQA 322 Query: 419 RLKMLADERLYKSKKNGRAQ 438 L ADE LY +K+ GR + Sbjct: 323 DLLRRADEALYAAKRQGRNR 342 >UniRef50_Q2RNW0 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNW0_RHORT Length = 360 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 16/177 (9%) Query: 279 FFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL------KALPEKGGYLCLFDVDKFK 332 F+ K + A D LT R+ + ++ L + D+D FK Sbjct: 182 FYEGTRAKAARQLETLAKSDPLTGLANRRGLLDAFGGAVLTRSRAPHRLSLLVLDLDHFK 241 Query: 333 NINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI 392 +IND +GH GD VL V ++K I + + R GG+EFA++ L + ++I Sbjct: 242 SINDRYGHEAGDGVLCHVAHVIKGMIRAN-DLIARIGGEEFALLLPDTDLAGAREVAEKI 300 Query: 393 VHF--------QVGSINLSTSIGVAHSNEC-PTVERLKMLADERLYKSKKNGRAQIS 440 GS++++ SIGVA + P L AD RLY++KK GR ++S Sbjct: 301 RKAIESTALIGPGGSLSVTVSIGVAELDPQYPDFAALFSSADHRLYQAKKAGRNRVS 357 >UniRef50_Q1YM41 Conserved hypothetical membrane protein with GGDEF domain n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YM41_MOBAS Length = 390 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 17/258 (6%) Query: 199 FTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRG 258 + A+ T + ++ L+I + + +G + Sbjct: 129 YYTVNAILMLFAAATAWEFYTDRETGLPSRYGLLIAYGVMALSFAGRIVQGINAHTAETA 188 Query: 259 IVEKEAIINNH-----FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL 313 + ++++ H G S A + + ++A D LT R++F++ L Sbjct: 189 HLVFDSVLQIHLLIAVIHTTASGAFVLSVAYERMARDLRHAAMHDALTGLPNRRAFEQRL 248 Query: 314 -KALPEKGGY-LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGD 371 KAL ++G + L +FD+D FK+IND +GH GDE L + +L + + V R GG+ Sbjct: 249 EKALQDRGHFALVVFDLDHFKSINDRYGHAAGDEALRRCA-LLCPSVLRQQDFVARVGGE 307 Query: 372 EFAVIYTGGTLEELL--------SILKEIVHFQVGSINLSTSIGVAHSNECP-TVERLKM 422 EFA I G T E ++ + S L+ S G+AHS E + +RL Sbjct: 308 EFAAILPGVTPTEAFMLTDGVRSTVAATRIAADDVSFGLTLSAGIAHSAEGEASFDRLMR 367 Query: 423 LADERLYKSKKNGRAQIS 440 AD LY++K GR +I+ Sbjct: 368 AADANLYRAKNGGRNRIA 385 >UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales RepID=A3WKT4_9GAMM Length = 364 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 73/309 (23%), Positives = 118/309 (38%), Gaps = 31/309 (10%) Query: 162 FSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAK------------NAIFTVSEAMEHFA 209 F +L+ + L +++ G N +A+ T+ + Sbjct: 38 FLILNSPILAWVNLLSIAMYLTAYWAFGQRKNMLAISLIWLEVLYHSALGTLMIGWDSGF 97 Query: 210 YLPTGLYVFAYKKDVYLRVCTLIIF-FAALVAVISGASCLYLVRRVINRGIVEKEAIINN 268 + ++V A + L+ L + + S Y + IN V I N Sbjct: 98 HYFLLMFVPAIFVSMSLKPAVLTLLGLWVYYLSLDLFSWYYPAMQPINATAVVGVHIFNL 157 Query: 269 HFERVLDGGLFFSAADVKKLY--SMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKG 320 ++ G L + L + A D LTK R+ E LK ++ Sbjct: 158 TVVFIMFGYLALYYLNKVNLTHDQLRFYATTDPLTKLRNRRHMSELLKRALQNKHAEQRN 217 Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 + L D+D FK++NDT GH +GD+VL IL+ + D KV R+GG+EF V Sbjct: 218 VSVLLLDLDHFKSVNDTHGHEVGDKVLRITADILRDTVR-DHDKVSRWGGEEFLVFLPRT 276 Query: 381 TLEELLSILKEIVHF---------QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKS 431 L + + I +I L+TSIGV+ +V L AD+ LY+ Sbjct: 277 NLNHAAQVAERIRKAIAKYPWHTVINENIQLTTSIGVSELKPDDSVNTLVKRADDALYRG 336 Query: 432 KKNGRAQIS 440 K+ GR + Sbjct: 337 KEAGRNWVE 345 >UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEB9_9SPHN Length = 600 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%) Query: 294 SAFLDDLTKAMGRKS----FDEDLKALPE--KGGYLCLFDVDKFKNINDTFGHLLGDEVL 347 A D LT R+ D+ + A + K + +FD+D FK IND++GH GDEV+ Sbjct: 443 MAQTDQLTGIANRRRTEFVLDQAIGAAEQSGKSVSIAIFDIDHFKRINDSYGHHTGDEVI 502 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSI---LKEIVHFQVGSINLST 404 +V + +Q+ V R+GG+EF ++ T E L + ++E + ++ Sbjct: 503 KRVAQDAAAQLRS-GDLVGRYGGEEFVIVLPDATQETALRVGERIRETIEAANSGPPVTI 561 Query: 405 SIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 SIGVA + T + L AD LY +K+ GR + Sbjct: 562 SIGVAELAQGETADALLRRADRALYSAKRAGRNR 595 >UniRef50_Q2L341 Putative signaling protein n=3 Tax=Bordetella RepID=Q2L341_BORA1 Length = 521 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 12/193 (6%) Query: 258 GIVEKEAIINNHFERVLDGGLFFSAADVK---KLYSMYNSAFLDDLTKAMGRKSFDEDLK 314 I E+ A + + + K K + + D LT + R+ DE L+ Sbjct: 322 RIAERLASVGTWYREAEQLKTALATVSRKIGTKFNQLRQDSLTDALTGLLNRRGLDEILQ 381 Query: 315 ALPE--KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDE 372 + P + + D+D FK IND GH GD V+ + +L+S+ + R GG+E Sbjct: 382 SEPRYGRAMSVLAVDIDHFKAINDELGHAAGDAVIRGIAALLRSRARA-SDILGRLGGEE 440 Query: 373 FAVIYTGGTLEELLSILKEIV-----HFQVGSINLSTSIGVA-HSNECPTVERLKMLADE 426 F V+ + L + I V + SIGVA + +E ++ + ADE Sbjct: 441 FVVLLPNTDRAQALQAAERIRAAVETFQAVPGGACTVSIGVAVYPHEGASLTAVLERADE 500 Query: 427 RLYKSKKNGRAQI 439 LY++K+ GR ++ Sbjct: 501 ALYEAKRGGRNRV 513 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 17/194 (8%) Query: 262 KEAIINNHFERVLDGGLFFSAADVKKLY-SMYNSAFLDDLTKAMGRKSFDEDLKALPEKG 320 E + R + L +++KL ++ A D LT R+ DE L+ + Sbjct: 521 SERRRSEAELRSANDKLRKQLEEIEKLQVALREQAIRDSLTGCFNRRYLDETLERELSRS 580 Query: 321 ------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFA 374 L + D+D FK INDT+GH+ GD+ L+ + + L++ I + + R+GG+EF Sbjct: 581 RREGYPLSLLILDLDHFKRINDTYGHMAGDQALIVLAETLRAGIRHE-DVLCRYGGEEFV 639 Query: 375 VIYTGGTLEELLSILK----EIVHFQVG----SINLSTSIGV-AHSNECPTVERLKMLAD 425 ++ L + +I +V ++ + S GV A+ + + L AD Sbjct: 640 ILMPRMPLAIAAERAELWRSKIAEIRVTFGNFELSFTASAGVAAYPDHGKMPDELTQAAD 699 Query: 426 ERLYKSKKNGRAQI 439 + LY +K GR ++ Sbjct: 700 QALYTAKNEGRNRV 713 >UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A0L4D8_MAGSM Length = 464 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 19/201 (9%) Query: 257 RGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL 316 R + A + + LD L + D LT+ R++ + L Sbjct: 250 RSQTQSLATSLSESQAQLDLTRKQLQQVQDDLKKAKEESLTDPLTQVANRRALFQSLTRE 309 Query: 317 PEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGG 370 + L + D+D FK INDT+GH +GD VL +V ++ + D + R+GG Sbjct: 310 TARTRRYGEPLSLIIIDLDHFKKINDTYGHPVGDRVLKEVAGHARALLR-DSDTLARYGG 368 Query: 371 DEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTV----E 418 +EF + TL + + ++I + S+++S S+GVA ++ + E Sbjct: 369 EEFVALLPETTLPQAMEKAEQIRLSVAAMRFKLKGESLSISASLGVAQLDDGASQDANNE 428 Query: 419 RLKMLADERLYKSKKNGRAQI 439 AD+ LY++K GR + Sbjct: 429 AFVHRADQALYRAKSGGRNCV 449 >UniRef50_A3VUD9 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VUD9_9PROT Length = 377 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 17/178 (9%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSF----DEDLKALPEKGGYL--CLFDVDKFKN 333 A+ K+ +Y+ A D L+ A+ R++F +++ L + D+D FK Sbjct: 171 LIDAESDKI-QLYDLAMTDPLSGALNRRAFTILAQREVRRSLRHHNALSAVMVDIDHFKR 229 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 +NDT+GH +GDEV+ V ++ ++I + + R GG+EF +I +E+ L + ++ Sbjct: 230 VNDTYGHAVGDEVIASVAALI-NRIKRQEDLLGRLGGEEFGLILPDTDIEQALRMTDRLI 288 Query: 394 HF--------QVGSINLSTSIGVAHSNECPT-VERLKMLADERLYKSKKNGRAQISWQ 442 G+ ++ S+GVA + ADE LYK+K+NGR ++ Sbjct: 289 EAIRGLSFTGGSGTFRITASLGVASLRGHDDPLSEFLRRADEALYKAKENGRNRVEVH 346 >UniRef50_B0C190 Diguanylate cyclase (GGDEF) domain protein n=2 Tax=Acaryochloris marina MBIC11017 RepID=B0C190_ACAM1 Length = 433 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 22/217 (10%) Query: 244 GASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKA 303 G +YL +I + + F R L+ L A+ + ++ A +D+LT+ Sbjct: 217 GLKTIYLALTIIITLAMMGLGLAVGRF-RTLNQELEKKVAE--RTAALERLAMVDELTQL 273 Query: 304 MGRKSFDEDLKALPE------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQ 357 R+ FD+ L+ + L L DVD FKN NDT+GH GDE L + K+L Sbjct: 274 ANRRQFDQRLEQAWKVARRQQHPLSLILCDVDYFKNYNDTYGHPAGDECLRSIAKVLDRS 333 Query: 358 IPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI----------VHFQVGSINLSTSIG 407 I R+GG+EFA++ + + + I+ I + +++ S+G Sbjct: 334 IRRPGEFSARYGGEEFAIVLPNVSRMDAIQIVTTIQTAIHQLQIPHRSSLNHASVTLSLG 393 Query: 408 VAH--SNECPTVERLKMLADERLYKSKKNGRAQ-ISW 441 +A N + E+L ADE LY++K GR + + W Sbjct: 394 IATMIPNANYSPEQLIQAADEALYQAKHQGRDRYVVW 430 >UniRef50_B1HWA5 Putative diguanylate cyclase (GGDEF domain) n=2 Tax=Bacillaceae RepID=B1HWA5_LYSSC Length = 325 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 16/201 (7%) Query: 252 RRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDE 311 ++++ EKE + N E++ A + S+ + D LT R+ F E Sbjct: 123 KKLLEAAYQEKEQALAN-LEQIYVEIEQQQAKLLTVNASLVELSETDKLTGLKNRRFFQE 181 Query: 312 DLKALPE------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKV 365 L+ K LC+ D+D FK +NDTFGH +GD+VL ++ ++L + + V Sbjct: 182 KLEQQLNSYYESAKPFSLCILDIDHFKKVNDTFGHQVGDDVLAQLAQLLTQRARKE-DTV 240 Query: 366 YRFGGDEFAVIYTGGTLEELLSILKEIV------HFQVGSINLSTSIGVAHSNECPTVER 419 R+GG+EF +I + I ++I H+ VG ++ SIG+A T Sbjct: 241 VRYGGEEFVMILPETEIAAAKEIGEQIRKTVALDHWPVGQ--VTISIGLATVTSKDTGTT 298 Query: 420 LKMLADERLYKSKKNGRAQIS 440 L AD+ LY SKKNGR Q++ Sbjct: 299 LLKNADDALYASKKNGRNQVT 319 >UniRef50_D2R0A0 Diguanylate cyclase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0A0_9PLAN Length = 352 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 15/185 (8%) Query: 267 NNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------G 320 N + L A ++ + N A D LT R++FD++ + Sbjct: 103 NEQLQEKLTIAESTLARQASEINQIMNEARTDALTGLANRRAFDDEFARRLSQWKRHGTA 162 Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 L L DVD FK +ND +GH GD VL ++ K+L + + D V R+GG+EFA++ Sbjct: 163 LMLVLVDVDHFKPVNDQYGHQAGDAVLKQLGKLLSAAVR-DTDLVARYGGEEFAILLVDS 221 Query: 381 TLEELLSILKEI--------VHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSK 432 +E + I + ++ ++ S G+A + ++L ADE LY +K Sbjct: 222 GIEGGAITIARIQQAIASSTFRHEGVALRITASFGLAQPSASDDQKQLIARADEALYAAK 281 Query: 433 KNGRA 437 GR Sbjct: 282 HGGRN 286 >UniRef50_B5VVN4 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Arthrospira RepID=B5VVN4_SPIMA Length = 652 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 18/169 (10%) Query: 289 YSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLL 342 + A LD LT R+ FD LK ++ + + DVD FK NDT+GH + Sbjct: 477 QELERLASLDGLTGVANRRQFDLHLKREWQRLLRETAPISVIMCDVDFFKAYNDTYGHQM 536 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VH 394 GDE L ++ KIL++ R+GG+EF ++ ++ L + +I + Sbjct: 537 GDECLKQIAKILENCAQRSTDLASRYGGEEFVIVLPNTGIKGALQVADKIQHQIRALEIE 596 Query: 395 FQVGSIN--LSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQI 439 Q ++ ++ S+GVA N + E L LAD LY++K GR I Sbjct: 597 HQKSEVSGYVTLSLGVACQVPNHDRSPESLIKLADAALYEAKSKGRNCI 645 >UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YC42_9BURK Length = 409 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 91/221 (41%), Gaps = 29/221 (13%) Query: 235 FAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNS 294 L + G L+ R V+K + H E L K + Sbjct: 201 INGLAVCVIGFCLSVLMWRKFTTIAVQKHQLEKAHTELQL------------KQRELERL 248 Query: 295 AFLDDLTKAMGRKSFDE----DLKALPEKGG--YLCLFDVDKFKNINDTFGHLLGDEVLM 348 D LT R +F E +LK +G + L D+D FK INDT+GH GD VL Sbjct: 249 TRQDGLTGLFNRNTFVELSTNELKRAKRQGSATTILLLDLDHFKRINDTWGHPAGDVVLR 308 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSI 400 V + + + + V R GG+EF V+ T E I ++I + ++ I Sbjct: 309 HVAQTMVNSVRS-TDLVGRLGGEEFIVLLPHTTAEASRKIAEKIRQRLEVSDIRWEGKRI 367 Query: 401 NLSTSIGV--AHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ SIG+ + E + L AD+ LY +K+ GR ++ Sbjct: 368 AVTASIGLSGTTAEESREFDSLYTEADKALYLAKQRGRNRV 408 >UniRef50_C6BU46 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BU46_DESAD Length = 490 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 27/254 (10%) Query: 204 AMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVIN--RGIVE 261 ME +Y + + +Y I+ + + L R I + V Sbjct: 234 GMEVSSYNMSETVPVGSNQMIYSPGAGRILALPLVARGEKFGCLVMLCERNIRLAKDQVS 293 Query: 262 KEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGG 321 NH L + F+ + A D LT+ R+SFDE L ++ Sbjct: 294 SLNAAVNHLSLALSNAIMFN--------KIKTRANRDGLTRVYNRRSFDERLVEEFKRHQ 345 Query: 322 ------YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAV 375 L + D+D FK +NDT+GH+ GD VL KV ++ + + R+GG+EF + Sbjct: 346 RLNTELSLLMVDLDYFKAVNDTYGHMAGDMVLEKVARMFEKTFRS-TDFIARYGGEEFVI 404 Query: 376 IYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVE--RLKMLAD 425 + ++ + + I +Q S N++ SIGV+ + + AD Sbjct: 405 LLPHTREDQAEMLAERIRAKIESCAMTYQDKSFNITASIGVSSVRPGSLEKDTEIVRKAD 464 Query: 426 ERLYKSKKNGRAQI 439 E LY +K GR ++ Sbjct: 465 EALYDAKMQGRNRV 478 >UniRef50_B3QH74 Diguanylate cyclase n=14 Tax=Bradyrhizobiaceae RepID=B3QH74_RHOPT Length = 355 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 24/210 (11%) Query: 251 VRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLY----SMYNSAFLDDLTKAMGR 306 ++ ++ R +V + + L+ L S ++ L ++ + D LT R Sbjct: 132 IKAIVERLVVTTREMQQANSA--LEERLSTSKQEIANLQVSLDAIRAESLTDPLTGLGNR 189 Query: 307 KSFDEDLKAL------PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV 360 K FD ++ ++ L + D+D FK+ NDT+GHL GD+VL V LK I Sbjct: 190 KHFDRTVQEAIRNAGASQQPLSLLMMDIDHFKSFNDTYGHLTGDQVLRLVGMTLKQSI-K 248 Query: 361 DKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF---------QVGSI--NLSTSIGVA 409 + R+GG+EFAV+ + + + + I G I ++ S GV+ Sbjct: 249 GQDFTARYGGEEFAVVLPNTPMRQAIIVADNIRRLVMSKELKKKSTGEILGRVTLSAGVS 308 Query: 410 HSNECPTVERLKMLADERLYKSKKNGRAQI 439 E L AD LY +K+NGR ++ Sbjct: 309 TLKPNDDAEALIERADACLYAAKRNGRNRV 338 >UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii SH145 RepID=D0SXM5_ACILW Length = 440 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 21/253 (8%) Query: 205 MEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEA 264 L L V K + +F V+ AS ++ V + Sbjct: 159 ASAIFILIANLCVQTQFKVAVYCSILIALFIMLGVSQFMSASQAFIFSVVFSPLWFFS-- 216 Query: 265 IINNHFERVLDGGLFFSAADVKK--LYSMYNSAFLDDLTKAMGRKSF----DEDLKALPE 318 I ++ +L+ F + + + ++ N A DDLT+ R+ F + + P+ Sbjct: 217 -IYINWNNILNVRRSFLRSLLDEWNYQTLKNLAHTDDLTQLYNRRHFVDMAERSIHQWPK 275 Query: 319 KGGY-LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIY 377 L +FDVD FKNIND++GH +GD VL + ++ + ++ + RFGG+EF + Sbjct: 276 HASSCLLMFDVDHFKNINDSYGHDVGDRVLQLIAEVTRKEMR-HSDVLARFGGEEFIALL 334 Query: 378 TGGTLEELLSILKEIVHF---------QVGSINLSTSIGVAHSN-ECPTVERLKMLADER 427 L++ L I + I +I + SIGVA +E L AD Sbjct: 335 EDTQLQDSLVIAERIRCAIQKQYIYVEPNHTIRFTISIGVAELESHTQPLEDLIKQADIA 394 Query: 428 LYKSKKNGRAQIS 440 LY++KK+GR +I Sbjct: 395 LYQAKKSGRNRIE 407 >UniRef50_A6W118 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W118_MARMS Length = 384 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 73/290 (25%), Positives = 126/290 (43%), Gaps = 32/290 (11%) Query: 178 FSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRV----CTLII 233 +L N I V + + FA+ +L T+++ Sbjct: 92 IALLGFVPERGFFNRFVVNRILFVLMLVSWCYAIERNWVSFAFLDHAFLATDVSWSTVLL 151 Query: 234 FFAALVAVISGASCLYL---------VRRVINRGIVEKEAIINNHFERVLDGGLFFSAAD 284 + ++ ++ +L + +++ I + F+ +L Sbjct: 152 WCVLFISALAIGLAWWLSGDTFRASGLISIVSLLIASHFVSSDIQFDALLSAQFLLWIWF 211 Query: 285 VKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGD 344 + L + A+LDD+TK GR++ +E L L K + + DVD FK NDTFGH +GD Sbjct: 212 L--LMESHRMAYLDDMTKLPGRRALNEQLVGLS-KYYAIAMVDVDHFKKFNDTFGHDMGD 268 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL---LSILKEIVHF------ 395 +VL V LK G+ +RFGG+EF +++ G L E+ L +++E + Sbjct: 269 KVLKSVAAQLKQF--SSPGRAFRFGGEEFTIVFRGKRLSEVDGILELIRENIESALVEVF 326 Query: 396 -----QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 Q +N++ SIGVA + + + + ADE LY+SKK GR ++S Sbjct: 327 DPKKKQETEVNVTASIGVAFAVVGESSDSVLKRADEALYQSKKKGRNRVS 376 >UniRef50_B5ZG65 Diguanylate cyclase with PAS/PAC sensor n=4 Tax=Proteobacteria RepID=B5ZG65_GLUDA Length = 464 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 17/175 (9%) Query: 283 ADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE-------KGGYLCLFDVDKFKNIN 335 A + ++ A +D LT R++F E ++ + +GG + + D+D+FK IN Sbjct: 283 ARRRMEQELHALARVDHLTGLPNRRAFTEGMEQAWQMLRGGVSRGGAVLMIDIDRFKTIN 342 Query: 336 DTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH- 394 D +GH GD VL V +L + + R GG+EFA L+E I + + Sbjct: 343 DRYGHAAGDAVLRHVATVLMATLRA-TDFTGRMGGEEFAACLPDTGLDEAGRIAERLRQA 401 Query: 395 -------FQVGSINLSTSIGVAHSNECPT-VERLKMLADERLYKSKKNGRAQISW 441 F+ SI L+ SIG++ + AD LY +K+NGR ++++ Sbjct: 402 IAGTPVPFESHSIALTVSIGISKMRLADAGGDDALSRADMALYSAKENGRDRVAF 456 >UniRef50_A6VTA2 Diguanylate cyclase n=2 Tax=Marinomonas RepID=A6VTA2_MARMS Length = 508 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 20/201 (9%) Query: 257 RGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYN----SAFLDDLTKAMGRKSFDE- 311 +VE+E N +L + D L S+ A D LT R ++ + Sbjct: 306 TQMVEQEKYANQSI-TLLKNKVTRMEKDTVSLRSLLQEKLAQAMTDSLTDLPNRTAYQDA 364 Query: 312 -----DLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY 366 + +K L + D+D FK +NDT+GHL GD+VL V K ++S + + ++ Sbjct: 365 ILPLCKIMQKTQKSICLAVCDIDHFKKVNDTWGHLAGDKVLRLVPKQIRSALLKE-DLMF 423 Query: 367 RFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVE 418 R+GG+EF + + TLE+ + + I + Q +++S SIG+A E Sbjct: 424 RYGGEEFVIAFPETTLEQAVERAEAIRLAVAKTPFNMQGEPVSISISIGIAELQAQENPE 483 Query: 419 RLKMLADERLYKSKKNGRAQI 439 L AD++LY +K+ GR ++ Sbjct: 484 SLFARADKQLYMAKEAGRNRV 504 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 16/165 (9%) Query: 289 YSMYNSAFLDDLTKAMGRKSFDEDLKAL------PEKGGYLCLFDVDKFKNINDTFGHLL 342 + ++ +D LT R+ + E + EK + D+D FK INDT+GH Sbjct: 156 EELKTASRVDGLTGLYNRRYWQERFDEMHKLCVRREKPSTALMLDIDHFKRINDTYGHQA 215 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VH 394 GD+V+ + ++K + + R+GG+EFA+I ++E+ + + I V Sbjct: 216 GDKVIKMLAALIKRCVR-ETDLAGRYGGEEFAIILNDSSVEDAKIVAERIRQLAQRLVVE 274 Query: 395 FQVGSINLSTSIGVAH-SNECPTVERLKMLADERLYKSKKNGRAQ 438 + SI+ + S+G+A S + AD+ LY++K+NGR Q Sbjct: 275 HEGESISFTVSLGLAQFSPDFKGAMAWLECADQALYEAKENGRNQ 319 >UniRef50_B8FL29 Response regulator receiver modulated diguanylate cyclase n=5 Tax=Bacteria RepID=B8FL29_DESAA Length = 593 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 17/169 (10%) Query: 288 LYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHL 341 + + + D+LT R+ F+E + +K LC+ D+D FKN+NDT+GHL Sbjct: 424 QEKIVDMSITDELTGLSNRRYFNEVVDIEVQKARNNGSPLTLCMMDLDHFKNVNDTYGHL 483 Query: 342 LGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH------- 394 GD+VL + +LK ++R+GG+EFAVI LE + Sbjct: 484 TGDKVLAETGALLKQGFRS-HDMIFRYGGEEFAVILPDTDLEHAKRACERFRESVQEHVM 542 Query: 395 -FQVGSINLSTSIGVAHSNECPTVE--RLKMLADERLYKSKKNGRAQIS 440 +V + ++ SIG+A+ +E L AD LY++K+ GR ++ Sbjct: 543 DAKVKQVKITISIGIANMPGEQIMEAGELIDAADHALYRAKELGRNRVE 591 >UniRef50_UPI000185121C diguanylate cyclase n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI000185121C Length = 466 Score = 187 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 55/178 (30%), Positives = 99/178 (55%), Gaps = 17/178 (9%) Query: 278 LFFSAADVKKLYS-MYNSAFLDDLTKAMGRKSF----DEDLKALPEK--GGYLCLFDVDK 330 +F +VK L S + + A+ D+LT R++F +E + E+ + L D+D Sbjct: 279 IFTDMTEVKNLQSQLEHFAYYDELTGIYNRRAFFQYCEEAFQESKEQDTPFTIILMDIDY 338 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK 390 FK +NDT+GH +GD+VL +V K+ +SQ+ + R+GG+EF + G T EE ++ + Sbjct: 339 FKKVNDTYGHSVGDQVLEQVAKVCQSQLHGHE-LFARYGGEEFVLGVKGYTEEEGAALAE 397 Query: 391 EI--------VHFQVGSINLSTSIGV-AHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ +H G I ++ S+GV A + E + ++ AD+ LY++K+ GR ++ Sbjct: 398 QLRSEVEALTIHTPDGKITVTLSLGVAALTKEDEALYQILNHADQALYRAKEAGRNRV 455 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 187 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 19/181 (10%) Query: 276 GGLFFSAADVKKL----YSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGG------YLCL 325 LF DV +L + +D LT R+ + LK ++ G L + Sbjct: 118 TSLFLIVQDVTELATYEQKLIEMNTVDALTGVYNRRFLESRLKEECDRYGRYSRPFSLMM 177 Query: 326 FDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL 385 D+D FK +NDT GH GD VL V + I + R+GG+EF + + Sbjct: 178 IDIDFFKKVNDTHGHQGGDLVLKNVAAGAAAMIR-KSDFLARYGGEEFCCLLPETDCDAA 236 Query: 386 LSILKEIVH--------FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRA 437 ++ + + FQ I ++ S+G+A + E L ADE LY++K++GR Sbjct: 237 ETVAEHLRAHIENMEHLFQKKVIRVTISLGIACFAPDDSPETLVKRADEALYQAKRSGRN 296 Query: 438 Q 438 + Sbjct: 297 R 297 >UniRef50_A8FZW4 Sensory transduction system, regulatory protein n=4 Tax=Shewanella RepID=A8FZW4_SHESH Length = 546 Score = 187 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 31/227 (13%) Query: 231 LIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYS 290 +I + V+ GAS +Y + R ++E E H + K+ Sbjct: 310 YMIAIFGGLFVLLGASYIYAILR--RSELIESEVEQRTH-----------DLNEAKR--K 354 Query: 291 MYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNINDTFGHLLGD 344 + + D LTK R+ FDE L+AL +K L + D+D FK NDT+GHL GD Sbjct: 355 LEELSQTDGLTKIPNRRCFDETLQALWQKAIREESKIGLMMIDIDHFKLYNDTYGHLAGD 414 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG-----TLEELLSILKEIVHFQVGS 399 + L +V + L + ++ V R+GG+EF V+ + ++ + S Sbjct: 415 QCLREVAQALSQTLNLNTDLVARYGGEEFVVLLPDTRDCLSPAKRCQYNIERLGLPHNSS 474 Query: 400 IN---LSTSIGVAHSNECPTVE--RLKMLADERLYKSKKNGRAQISW 441 + ++ SIGVA + + L AD LY++K +GR ++ + Sbjct: 475 LTSEFITVSIGVASISPTQDSDLVDLTTQADLALYEAKNSGRNRVCF 521 >UniRef50_D0J6P1 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Proteobacteria RepID=D0J6P1_COMTE Length = 462 Score = 187 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 66/338 (19%), Positives = 131/338 (38%), Gaps = 26/338 (7%) Query: 120 QVVKYRHVKNTGFISF------DGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDS 173 VV YR +T + + D K + + V + S + + +LL+++L + Sbjct: 94 SVVNYRKDGSTYHVEWNISPVRDEKGVIRHFVAVQRDISE-RVQAEQERALLARALNATN 152 Query: 174 ENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLII 233 + ++ + + + + A + L +GL+ + + + Sbjct: 153 DGILITDRDSTIVFVNEAFEALTGYSAAELLGQPTEMLRSGLHEPEFYAQLQEALSLGHN 212 Query: 234 FFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYN 293 F A + Y + + + E+ +H+ G + V++ + Sbjct: 213 FRATFINRHKSGGVYYAEQSI---AALRDESGQISHYV----GASKDISRMVQREMELRE 265 Query: 294 SAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVL 347 A D LT + R + + +LK + + L D+D FK +ND FGH+ GD VL Sbjct: 266 RANRDKLTGLLNRHAGETELKRNQLQAQNQLRPYGVILGDIDLFKQVNDRFGHVAGDRVL 325 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV-----HFQVGSINL 402 V +L ++ + R+GG+EF ++ + +L + + I Sbjct: 326 KMVAHVLSGKVRR-YDRAVRWGGEEFLIVLSDASLGVAAGLAERIRCAVAECADPEVGRF 384 Query: 403 STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + S+GV T + L AD LY++K GR Q++ Sbjct: 385 TISLGVGLWEPGETEDDLLKRADAALYRAKHRGRNQVA 422 >UniRef50_C7HYK2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomonas intermedia K12 RepID=C7HYK2_THIIN Length = 780 Score = 187 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 123/330 (37%), Gaps = 54/330 (16%) Query: 129 NTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVT 188 + + DG + P T + L RF + + + ++ Sbjct: 224 SIALMRADGYLLARWPAPKTDD--------LPRFY------SAKRQGELARAARHAPDGA 269 Query: 189 GDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLII---FFAALVAVISGA 245 + +F+ + L + + Y V + V +I F+ A ++ Sbjct: 270 ------TSGVFSGRVDSDDIPRLGAWVRLPHYDVLVNMTVPRALIWRDFWRAYWPALTIL 323 Query: 246 SCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMG 305 + V + R + ++ SA + MY A D LT + Sbjct: 324 ALWLAVLTLAYRLVRKQAER--------------DSAQLRDRSEIMYRLANQDSLTGLLN 369 Query: 306 RKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIP 359 R+ E L+ ++ G L LFD+D FK IND FGH GD VL +V +L++++ Sbjct: 370 RRGMGEYLQRAHDRARDHGIGYALVLFDLDHFKLINDGFGHAAGDAVLQQVAHLLQTRVR 429 Query: 360 VDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF--------QVGSINLSTSIGVAHS 411 + +V R+GG+EF V+ +L+ + +++ + L+ S GV+ Sbjct: 430 KE-DQVARWGGEEFLVLLPDSSLQTAHATAEKLRELISHTRMSVGGAELRLTASFGVSAW 488 Query: 412 NECPTV--ERLKMLADERLYKSKKNGRAQI 439 + L D LY +K GR ++ Sbjct: 489 EPGGPLASAELLGQCDSALYNAKAGGRNRV 518 >UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C0K6_ACAM1 Length = 449 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 17/189 (8%) Query: 267 NNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL------KALPEKG 320 + F + + + + +Y A LD LT+ R+ F+ L E Sbjct: 238 QDEFNHLAETFNLMANQLEQSQQDLYRLATLDGLTEVYNRREFNRWLLVEIERSQRGEHP 297 Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 L + D+D FK +NDT+GH GD L +V ++L+ ++ V R+GG+EF VI Sbjct: 298 VSLIMVDIDHFKRLNDTYGHQAGDLALCEVAQLLQREVR-PGDIVCRYGGEEFGVILPKA 356 Query: 381 TLEELLSILKEIVHF---------QVGSINLSTSIGVA-HSNECPTVERLKMLADERLYK 430 T + I + I I+++ S+GVA + + ERL AD+ LY Sbjct: 357 TSADSWVIAERIRLAIAEKSVVLPSQQHIDMTASLGVATYPDHADCKERLVKQADQALYT 416 Query: 431 SKKNGRAQI 439 +K GR ++ Sbjct: 417 AKYQGRNRV 425 >UniRef50_B5XX83 Sensory box-containing diguanylate cyclase n=6 Tax=Enterobacteriaceae RepID=B5XX83_KLEP3 Length = 418 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 96/188 (51%), Gaps = 5/188 (2%) Query: 257 RGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA- 315 R + + + R++ + +V + SA D LT + R+ F ++A Sbjct: 215 RHVQTYAGPVVLYNIRLMLCIIHDITEEVHLKKELEFSAAHDPLTGLLNRREFYRLVEAP 274 Query: 316 -LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFA 374 +G L L D+D FK+IND GH GDEVL+ + +IL++ + + K+YR+GG+EF Sbjct: 275 SFIAQGFCLLLIDIDHFKSINDIHGHQKGDEVLLVISRILETSVDRE-DKIYRWGGEEFL 333 Query: 375 VIYTGGTLEELLSILKEIVHF--QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSK 432 + + L + + I + +++++ SIGVA ++ +++L D+ LY +K Sbjct: 334 LFLPHSPIARALILAEGIRQAVSEYQTLSVTVSIGVAEHHDGEAIDQLFSRVDKALYVAK 393 Query: 433 KNGRAQIS 440 GR ++S Sbjct: 394 NGGRNRVS 401 >UniRef50_B9Z5H6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z5H6_9NEIS Length = 650 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 17/193 (8%) Query: 262 KEAIINNHFERVLDGGLFFSAADVKKLYS-MYNSAFLDDLTKAMGRKSFDEDLKALPE-- 318 E H + + L +++ L S + D LT R+ D+ L + Sbjct: 440 SERKRLEHSLKTANEALRQHLNEIESLQSGLKEQLVRDPLTGVFNRRYLDDALPRVLAHT 499 Query: 319 ----KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFA 374 K L + D D FK INDT+GH GD VL + L+ + + V R+GG+EF Sbjct: 500 LALGKPVALLMLDADHFKRINDTYGHKAGDCVLSTLGARLRDSLRSN-DMVCRYGGEEFL 558 Query: 375 VIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIGVA-HSNECPTVERLKMLAD 425 ++ G +LE ++ +++ + ++N++ SIGVA E L AD Sbjct: 559 IVLPGMSLEHAIAKAEQLRKVVQQWPIEALDHTLNVTVSIGVACSPLHAEDAESLVHAAD 618 Query: 426 ERLYKSKKNGRAQ 438 LY +K +GR + Sbjct: 619 TALYVAKSSGRDR 631 >UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSY0_9GAMM Length = 261 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 14/171 (8%) Query: 285 VKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTF 338 ++ + A D LT R+ F + ++ L + DVD FK+IND F Sbjct: 75 LRVQKQLEELANKDALTGLYNRQYFFDHANEWDKRCRENSGHFSLLMLDVDHFKSINDRF 134 Query: 339 GHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV----- 393 GH +GD VL +V ++K + + R+GG+EF + ++ + I Sbjct: 135 GHPVGDRVLQRVSNVIKGFMRQE-DMCARYGGEEFICLLPDTNAAGAKAVAERIRLGMEH 193 Query: 394 --HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISWQ 442 + ++LS SIG + +E L AD+ LY++K GR + ++ Sbjct: 194 QAFLKARGLSLSVSIGATTMSANDNLETLIERADQALYEAKDGGRNRAVFK 244 >UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7QLL5_CYAP0 Length = 494 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 14/191 (7%) Query: 262 KEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA------ 315 K + + + + A++K ++ D LT R+ +E LK Sbjct: 292 KLTEVKQLLATNVTRHISLALANIKLCETLKQQNIRDALTGLYNRRYLEESLKKELERAK 351 Query: 316 LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAV 375 E+ + + DVD FKN+NDTFGH GD+VL K+ L+ I R+GG+E + Sbjct: 352 RKERSLGIIMIDVDHFKNVNDTFGHDKGDQVLKKLGGFLQRHIR-GSDIACRYGGEELTL 410 Query: 376 IYTGGTLEELLSILKEIVH------FQVGSINLSTSIGVA-HSNECPTVERLKMLADERL 428 I +LE +++ + L+ S+G+A + + L AD+ L Sbjct: 411 ILPEASLENTRQRAEQLRQAVKNLDLDLCDHTLTISVGIACFPEHGYSGKALLKTADQAL 470 Query: 429 YKSKKNGRAQI 439 Y++K+ GR ++ Sbjct: 471 YQAKQQGRDRV 481 >UniRef50_C5S8T8 Diguanylate cyclase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S8T8_CHRVI Length = 437 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 14/167 (8%) Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKNINDTFGH 340 +L + LD LT+ RK+FD L+ + E + L + D D FK +ND +GH Sbjct: 264 ELDAAQRENDLDGLTRLYNRKAFDRQLERVFELCKLSGQSACLLMIDADHFKRVNDEYGH 323 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI-------- 392 GD VL ++ P V R+GG+EFA I +L+ L + + + Sbjct: 324 PAGDTVLKRLANCCTKGFPRKSDFVARYGGEEFAAILQDTSLKSALPLAQRLLDTIRIMR 383 Query: 393 VHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + + ++++ SIG+A + E +AD LY +KK GR +I Sbjct: 384 IEHEGLELDITVSIGIAELGTLASAEHWLKMADGALYAAKKGGRDRI 430 >UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRA7_DESBD Length = 495 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 16/169 (9%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDE----DLKALPEKGGYL--CLFDVDKFKNINDTFG 339 ++ + +A D LT A+ R++F E + + GG+L + D+D FKN+NDT+G Sbjct: 319 RQSRELALAASTDMLTGALNRRAFMESASREFARVCRYGGHLSCIMIDLDHFKNVNDTYG 378 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV------ 393 H GD VL + S++ + R+GG+EF ++ G ++ +E+ Sbjct: 379 HAAGDLVLSSSAHYIASRLR-EPDMFCRYGGEEFVILLPGTDRNGAATVAEELRAGLAGL 437 Query: 394 --HFQVGSINLSTSIGVAHSN-ECPTVERLKMLADERLYKSKKNGRAQI 439 + L+ S GVA + +C T++ L LAD+ LY++K+NGR ++ Sbjct: 438 DLQRGDEKLPLTASFGVAEIHAQCATLDTLLSLADQALYEAKENGRNRV 486 >UniRef50_A1SY47 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY47_PSYIN Length = 794 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 19/243 (7%) Query: 214 GLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVR--RVINRGIVEKEAIINNHFE 271 YK++ ++ ++F L+ L + + +N+ I +K A + Sbjct: 551 NSSAIKYKEEFNYKLLWRVLFVVLLLIAFFSYRQWLLTKLNKTLNKKINQKTAALQE-LN 609 Query: 272 RVLDGGLFFSAADVKKLYSMYNS-AFLDDLTKAMGRKSFDE------DLKALPEKGGYLC 324 L+ + ++ + AF D+LT R E + + L Sbjct: 610 ESLERRIKERTQKIEHSKMLLQDVAFKDNLTSIFNRHYLFEISPMLLTVSEETQTPLSLL 669 Query: 325 LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEE 384 L DVD FK INDT+GHL GD +L +VK +++ + D V RFGG+EF ++ LEE Sbjct: 670 LIDVDHFKKINDTYGHLTGDNILKFIVKNIQAILRADDIFV-RFGGEEFIILLPKANLEE 728 Query: 385 LLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 + + +++ H I+++ SIG + T+E+L AD LY +K+ GR Sbjct: 729 SVMVAEKLRLSVEQNNYHKNGMDISITVSIGASQYQHTETLEKLISRADLALYSAKEKGR 788 Query: 437 AQI 439 Q+ Sbjct: 789 NQV 791 >UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WUF6_COMTE Length = 373 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 112/267 (41%), Gaps = 34/267 (12%) Query: 193 NAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAA-----LVAVISGASC 247 F V A + Y+ + L TL + L+A+ S A C Sbjct: 107 QVITLFFAVGMAGSAISAYSAYRYMALTAVGLVLLPTTLWLLIQPSTEQRLLALTSLAFC 166 Query: 248 LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRK 307 ++VR R L L + N+A DDLT R+ Sbjct: 167 AFVVRAT-------------RELSRALQSLLRLRRELEIQHSIASNAARTDDLTGVNNRR 213 Query: 308 SFDEDLKAL----PEKGGYLC--LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVD 361 +F+E + + G LC LFD+D FK INDT GH GD+VL VV+ +KS + + Sbjct: 214 AFNEKAETMFAYTRRYGVPLCALLFDIDHFKQINDTHGHAAGDKVLQAVVRQIKSALR-E 272 Query: 362 KGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNE 413 R GG+EF V+ G ++E + I + I ++ ++ S+GVA ++ Sbjct: 273 ADLCGRLGGEEFGVLLAGTNMQEAVQIAERIRLAVQAIKEPVNDTTLQVTISVGVAEADS 332 Query: 414 -CPTVERLKMLADERLYKSKKNGRAQI 439 C V L AD +Y++K NGR Q+ Sbjct: 333 ACADVSTLLKQADAAMYRAKSNGRNQV 359 >UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1B3_ACIDE Length = 445 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 17/179 (9%) Query: 276 GGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVD 329 G L + + + + + A +D LT R++F L+ + G + + D+D Sbjct: 256 GALMLTNEHITR--ELRHLAEVDPLTNVFNRRAFLTLLEKAISNAQRTQSGLPVLVIDLD 313 Query: 330 KFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSIL 389 FK INDT+GH GDEVL V + + + + R GG+EFA+ + E ++ Sbjct: 314 HFKKINDTWGHQSGDEVLRHFVALANGCLRKE-DVMGRLGGEEFAIFLPNASSEGSQAVA 372 Query: 390 KEIVHFQV--------GSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + + G I L+ SIGV T + + ADE +Y++K+ GR ++ Sbjct: 373 ERLRALVAHHPAMTGRGPIALTVSIGVTQYGGGETSDFVLQRADEAMYRAKERGRNRVE 431 >UniRef50_Q2W9E2 Predicted signal transduction protein n=2 Tax=Magnetospirillum RepID=Q2W9E2_MAGSA Length = 679 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 127/284 (44%), Gaps = 31/284 (10%) Query: 180 LFKNGKPVTGDEYNAKNAIFTV------SEAMEHFAYLPTGLYVFAYKKDVYLRVCTLII 233 L + GD + ++ V + + + + +Y ++ + Sbjct: 150 LACHTAAKVGDINGVIDIVYPVHALKVSLDYVLNTVLAYFFAILLLLSAALYFKLKVFVA 209 Query: 234 FFAALVAVISGASCL--YLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSM 291 + + L L RRV +GI+ + A ++++F ++L + + + Sbjct: 210 RPITNMVALMQEIILHTDLSRRVETKGIIAEVADLSDYFNKLLRTVEEY-------QHRL 262 Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDE 345 + + D LT+ R+ FDE L ++ + D+D FKNINDTFGH +GD Sbjct: 263 EDLSIRDPLTRLYNRRKFDEFLDHEIDRAQRHGHPFCVAQIDLDDFKNINDTFGHPIGDL 322 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQV 397 VL ++ +L ++ V R G DEFAV+ T+EE ++ +++ V Sbjct: 323 VLKELASVLYREVRR-TDVVARVGADEFAVLLPETTMEEGVAAAEKLRQAVADCQLGLPV 381 Query: 398 GSINLSTSIG-VAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 G + ++ SIG V + + ++L + AD +YK+K++G+ Q++ Sbjct: 382 GGVRITASIGLVGYPDNADDAQKLAIAADVAIYKAKRSGKNQVA 425 >UniRef50_Q2B6Y4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B6Y4_9BACI Length = 532 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 89/209 (42%), Gaps = 24/209 (11%) Query: 255 INRGIVEKEAIINNHFERVLDGG---------LFFSAADVKKLYSMYNSAFLDDLTKAMG 305 I++ E E I H + L +V + AF D LT Sbjct: 316 IHKFENEAETYIQIHSFPIKKSSGELAGTTVILSNITQEVLLRQKLEELAFKDGLTGIYN 375 Query: 306 RKSFDED----LKALPEKGG--YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIP 359 R F E LK GG + LFD+D FKNIND +GHL GDE L + ++ + Sbjct: 376 RTYFIEQSGRLLKEAEAAGGTMSVILFDIDYFKNINDQYGHLQGDEALRHIARV-SGSLL 434 Query: 360 VDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHS 411 R+GG+EF + G LE ++I + G I+L+ S G A + Sbjct: 435 GGGSIFARYGGEEFVICLPGADLESAADQAEKIRAGIEEVFLPSETGMISLTASFGAAEA 494 Query: 412 NECPTVERLKMLADERLYKSKKNGRAQIS 440 T+ERL AD LY+SK GR +++ Sbjct: 495 APGMTLERLLHNADTALYQSKNGGRNRVT 523 >UniRef50_A6Q2U9 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2U9_NITSB Length = 483 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 5/157 (3%) Query: 288 LYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY-LCLFDVDKFKNINDTFGHLLGDEV 346 + ++ ++A D LT R++ LK L + + D+D FKN ND +GH GDEV Sbjct: 326 IDTLKDAALKDSLTHLFNRRALKSFLKTLKPNSRFGIIFCDIDHFKNFNDRYGHDKGDEV 385 Query: 347 LMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI---VHFQVGSINLS 403 L +V K L + D + R+GG+EF ++ +LE+L + +++ + I ++ Sbjct: 386 LQEVAKTLSKFVRKD-DFLARWGGEEFLIVLPNISLEDLKNRAEKMRQAIENISKDIPVT 444 Query: 404 TSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 S GV + ++ ADE LY++K+ GR ++ Sbjct: 445 CSFGVTVCEDASHIDECIKRADEALYRAKEKGRNRVE 481 >UniRef50_C6P3N4 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3N4_9PROT Length = 387 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 102/229 (44%), Gaps = 22/229 (9%) Query: 230 TLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGL-----FFSAAD 284 I+ + + S +++ + G+ +++ F V+ L F Sbjct: 158 IAIVVVVLGLRSLVAMSGQFILAQPETGGVPNWVQVLS--FVAVMASSLLGSIGFLLMVK 215 Query: 285 VKKLYSMYNSAFLDDLTKAMGRKSF----DEDLKALPEKGGYLCLFDVDKFKNINDTFGH 340 + + + A D LT R++ + + + L + D D FK INDT+GH Sbjct: 216 ERTDREVLHLAMTDSLTGVPNRRALMDYAERAMAQRGGRSVALLMIDADHFKRINDTYGH 275 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF----- 395 +GDEVL ++ ++L+ ++ + R+GG+EF V+ E L + + + Sbjct: 276 PVGDEVLRQLTRLLQQRLR-GGDLLGRYGGEEFCVVAPDADAEGALKLAESLRESVASAV 334 Query: 396 ---QVGSINLSTSIGVAHS--NECPTVERLKMLADERLYKSKKNGRAQI 439 + G ++++ SIG+AHS + ++ + AD LY +KK GR Q+ Sbjct: 335 LDTEQGKLSITVSIGIAHSTADAGRALKDILAEADIALYSAKKGGRNQV 383 >UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dickeya zeae Ech1591 RepID=C6CKY4_DICZE Length = 463 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 19/183 (10%) Query: 277 GLFFSAADVKKLYSMYN-SAFLDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDVD 329 G ++K+ ++ A D LT R+ FDE + L K L + D+D Sbjct: 271 GSMLDVTELKQSETLLQVLAQTDSLTGIANRRHFDERYQHLWRQQESMQKPLSLLMIDID 330 Query: 330 KFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSIL 389 +FK ND++GH GD + VV+ L +Q+P + + R+GG+EF ++ + L + Sbjct: 331 RFKRFNDSYGHSKGDACIKSVVETLAAQLPSSECLLGRYGGEEFIMVLPETDHRQALILA 390 Query: 390 K---------EIVHFQVGSINLSTSIGVAHSNECPTVERLKML---ADERLYKSKKNGRA 437 + EI H + ++ SIGVA + T + L AD+ LY++K GR Sbjct: 391 ERCRQAVESMEIPHTKSPQGVVTVSIGVAAAKPGETGSSMTQLSNDADQALYRAKHQGRN 450 Query: 438 QIS 440 ++ Sbjct: 451 RVE 453 >UniRef50_A1S6F8 Diguanylate cyclase n=2 Tax=Shewanella RepID=A1S6F8_SHEAM Length = 355 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 15/167 (8%) Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLKAL---PEKGGYLCLFDVDKFKNINDTFGHLLG 343 ++ + + D LT R++F+ L L + D+D FK NDT+GH G Sbjct: 186 EITELSVISLTDKLTGLNNRRAFESRLAQEFLPSTPKCSLLVIDIDHFKQFNDTWGHNAG 245 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI--- 400 D+VL+ V + LK + + V R+GG+EF ++ + E+ +I +++ Sbjct: 246 DKVLVYVAQNLKQAVKGE-DLVARYGGEEFVIVLKDTSAEDAANIAEKLRDRIANKKLTL 304 Query: 401 --------NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 +S SIGVA + T E+ AD LY++K GR ++ Sbjct: 305 KKDNLDLGKVSVSIGVAKAYANETPEQFFERADGALYRAKGTGRNRV 351 >UniRef50_A4G283 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G283_HERAR Length = 475 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 19/179 (10%) Query: 279 FFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK---ALPEKGGY---LCLFDVDKFK 332 + A++ + + D LT A R+ FDE K A+ + G+ + D+D FK Sbjct: 292 LITIANLGRQRELEEKTHRDVLTGAHNRRYFDEAFKHEFAVASRQGWPLSVAFLDIDHFK 351 Query: 333 NINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI 392 +NDT+GH GD+ L+ + +I+ +QI V R+GG+EF +++ G EE L +L I Sbjct: 352 QVNDTYGHAAGDKALIALSRIIATQIRGSDIFV-RYGGEEFVLLFPGTVAEEALIVLNRI 410 Query: 393 VH--------FQVGSINLSTSIGVAHSNE----CPTVERLKMLADERLYKSKKNGRAQI 439 + + +L+ S G+A + T E L AD LY +K+NGR QI Sbjct: 411 RQAVASYCHTYDTATFHLTISAGLAFHMDEDMKHETAEGLLRTADNALYTAKQNGRNQI 469 >UniRef50_A6W0K6 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0K6_MARMS Length = 556 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 67/308 (21%), Positives = 124/308 (40%), Gaps = 31/308 (10%) Query: 145 YPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEA 204 P + + + ++ +S + L F +F + A + Sbjct: 263 SPESTDLAWQIVVRQPLSIAMSAVNEVHKLLLFFGVFATLLCMLLAYQFAGTLSRPLERL 322 Query: 205 MEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEA 264 + G ++ D L I AS ++ +++ + +++ Sbjct: 323 ALTAKSIQQGDRKVTFQSDSKL---------------IEVASLSRSLQEMMSSLLTREQS 367 Query: 265 IINNHFERVLDGGLFFSAADVKKL-YSMYNSAFLDDLTKAMGRKSFDEDLKALPEK---- 319 ++ + +L+ + A+++ S+ A D LT R + DE L + Sbjct: 368 LMQMNV--MLETKVKNRTAELEASNRSLEAIARKDPLTHIYNRLALDEALHKEYRQAQES 425 Query: 320 --GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIY 377 + + D D FK +ND+FGH +GD VL K+ K+L Q+ DKG V RFGG+EF V+ Sbjct: 426 KCPFAVIMIDADHFKRVNDSFGHTVGDLVLQKIAKLLTVQV-GDKGIVARFGGEEFTVLL 484 Query: 378 TGGTLEELLSILKEIVHFQVGS-----INLSTSIGVAHSN-ECPTVERLKMLADERLYKS 431 +E +I + I + ++ S GVA + E++ AD LYK+ Sbjct: 485 PNMNADEAKNIAEMIREALEKEEMSDGLYVTASFGVAMYEIDDSHYEQVLNRADAALYKA 544 Query: 432 KKNGRAQI 439 K+ GR ++ Sbjct: 545 KEQGRNRV 552 >UniRef50_D0KW78 Diguanylate cyclase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KW78_HALNC Length = 460 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 16/205 (7%) Query: 248 LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRK 307 + R++ ++ + E N ER+ ++L + D LT R Sbjct: 250 IDTFRKMEDKRLAAVELENNQMRERIAKLEAS-RVVLHEQLVASTQKMLRDTLTGLPNRL 308 Query: 308 SFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVD 361 +FDE + + L L+DVD FK +NDTFGH GD+ L V K L I D Sbjct: 309 AFDERVALEAARMQREKTPLCLALWDVDYFKRVNDTFGHQAGDKALHVVGKTLSQLIR-D 367 Query: 362 KGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNE 413 V R+GG+EF ++ L++ +L+ I F+ + ++ S GVA Sbjct: 368 VDMVARYGGEEFVMVLPKADLQQAFVVLERIREKLAGTAFRFKDTPLKITLSCGVAEFGA 427 Query: 414 CPTVERLKMLADERLYKSKKNGRAQ 438 T+E + ADE LY++K NGR + Sbjct: 428 GETIESVMARADEALYRAKSNGRNR 452 >UniRef50_B2J0M5 Diguanylate cyclase with PAS/PAC and GAF sensors n=2 Tax=Nostocaceae RepID=B2J0M5_NOSP7 Length = 888 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 71/294 (24%), Positives = 114/294 (38%), Gaps = 35/294 (11%) Query: 164 LLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKD 223 L ++L S FS + G P + V E ++ + + + Sbjct: 603 RLEQTLHPFSRTRDFSYYYQGLPTVLHNIQESDLSADVFELLQLYQIKAAMVVPILNGEH 662 Query: 224 VYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAA 283 ++ L+A A + V + + I H + + Sbjct: 663 LW----------GLLIAHQCSAPRYWQAFEVNLLQQLASQVAIAIHQSVLYQQVQAAN-- 710 Query: 284 DVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDT 337 + A LD LT+ R+ FD+ L+ + L LFDVD FK NDT Sbjct: 711 -----EELQRLATLDGLTQIANRRRFDQYLENEWHRLKREQMPLSLILFDVDFFKRYNDT 765 Query: 338 FGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQV 397 +GHL GD+ L ++ LKS I V R+GG+EFAVI +E +S+ + I Sbjct: 766 YGHLAGDDCLRQLGSALKSVIKRPADLVARYGGEEFAVILPNTEIEGAISVAQTIRQAVY 825 Query: 398 GSI----------NLSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQI 439 I ++ S+GVA N + + L AD+ LY +K+ GR ++ Sbjct: 826 DLIIPHAQSSVCDRVTVSLGVASIVPNCETSPQDLINAADKSLYIAKQQGRDRV 879 >UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4Y784_SHEPC Length = 368 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 25/227 (11%) Query: 235 FAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLY-SMYN 293 A + S + + ++++ + E ++++ N+ ++ L +V+ L M N Sbjct: 143 LAEFGIKLQSNSDINTLNQLVDGVMDEMQSLLINNQN--MEQSLNAMGQEVQHLKSEMEN 200 Query: 294 S---AFLDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVDKFKNINDTFGHLLGD 344 A D LT R++++ ++ + L + D+D+FK NDT+GH +GD Sbjct: 201 LSLAAMTDQLTSLYNRRAYEIAIQDHIHRAQEQHSRCSLLIVDIDRFKQFNDTYGHQIGD 260 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------VHFQVG 398 +VL V LK + D V R+GG+EF V+ + L + + + H +G Sbjct: 261 KVLAYVALALKQCVRGD-DFVARYGGEEFVVLLPNTHFHDALQVAETLRERISERHLTIG 319 Query: 399 SIN------LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ SIG+A E E L AD+ LY++K +GR + Sbjct: 320 KDKKLSLGAITVSIGLASLQEGDDAETLFSRADKALYEAKSDGRNCV 366 >UniRef50_C6D4J1 Diguanylate cyclase with GAF sensor n=2 Tax=Paenibacillus RepID=C6D4J1_PAESJ Length = 653 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 109/275 (39%), Gaps = 13/275 (4%) Query: 172 DSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTL 231 +N + N ++ + ++ + + + + + + Sbjct: 379 KEKNQFVVMASNIPAMSSEHFSPEYGFCGIVHRTKEPLIISDYWHTRVVNSKLMDNTGAR 438 Query: 232 IIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSM 291 + ++ + + + N + ++ V+ + + + + Sbjct: 439 SLIATPILVDSEVVGVIMVAHKSANFFSYDNYKLLQ-----VMSTHIGLAITNASLHAEV 493 Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEKG--GYLCLFDVDKFKNINDTFGHLLGDEVLMK 349 D+LT R +E +++ K G L L D+D FK INDTFGH +GD++L++ Sbjct: 494 RRMVITDNLTGLHARHYLNEQIQSRQRKDPLGALILVDIDHFKQINDTFGHQVGDQILVQ 553 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSIN--LSTSIG 407 V I++S I R+GG+E AV G E+ I + I ++ S G Sbjct: 554 VSSIIRSSIR-QGDIAARWGGEELAVYLPGIRSEQAYRIAERIRTHVEAETQPVVTVSCG 612 Query: 408 VAHS---NECPTVERLKMLADERLYKSKKNGRAQI 439 V+ NE +VE L AD LY++K NGR +I Sbjct: 613 VSEWTFENEKISVESLFYRADMALYEAKNNGRNRI 647 >UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Phytochrome (GAF) sensor n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YS99_9CYAN Length = 628 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 20/170 (11%) Query: 289 YSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLL 342 + A D LT R+ FD+ L + L + D+D FK NDT+GHL Sbjct: 455 QELEKMAMTDGLTLVANRRFFDKILSQEWNRLRREIGTLSLIICDIDYFKRYNDTYGHLA 514 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINL 402 GD L KV ++L+ ++ V R+GG+EFA++ LE + ++ E++ +V ++ + Sbjct: 515 GDSCLKKVAQVLQEEVKRSGDLVARYGGEEFAILLPKTDLEGAI-LVSEVICSKVRALQI 573 Query: 403 -----------STSIGVAHSNECPTV--ERLKMLADERLYKSKKNGRAQI 439 + S+GVA + P + + L + AD+ LY++KKNGR ++ Sbjct: 574 THEKSLVAPYVTISVGVASTIPEPPLIPKTLILRADQALYEAKKNGRNRV 623 >UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D439_DEIDV Length = 633 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 17/189 (8%) Query: 267 NNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------G 320 + + + +++ S+ + D LT R+ +E + + Sbjct: 438 QERLAQTVAETAALAIVNLRLRESLRQQSIRDPLTGLYNRRYLEESFERELHRAQRSDDP 497 Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 + + D+D FK+ ND+ GH GDE+L + ++L I + R+GG+EFA+++ G Sbjct: 498 IAVIMLDIDHFKHFNDSHGHEAGDELLRALGQLLSGCIRAE-DVACRYGGEEFAMVFPGM 556 Query: 381 TLEELLSILKEIVHFQVGSI---------NLSTSIGV-AHSNECPTVERLKMLADERLYK 430 TL++ ++ H + +S S+GV A + L AD LY+ Sbjct: 557 TLDQATRWADQLRHTVESTQFASRGEALEQVSVSLGVAAFPQHGRHLADLIRAADAALYR 616 Query: 431 SKKNGRAQI 439 +K+ GR ++ Sbjct: 617 AKREGRNRV 625 >UniRef50_B0RWR8 Diguanylate cyclase domain protein n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RWR8_XANCB Length = 483 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 23/202 (11%) Query: 262 KEAIINNHFERVLDGGLFFSAADVKKLY-SMYNSAFLDDLTKAMGRKSFDEDLKAL---- 316 E + L + +++ + +A D LT R+ FD + L Sbjct: 278 SEHLRVQWRLTKTTEALAEANRQLEQANAQLLGAARNDHLTGLANRRGFDRAFERLLPAV 337 Query: 317 --PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFA 374 +G + + DVD FK ND +GH GD+ L + L+S + + V R+GG+EFA Sbjct: 338 RDGTRGASVLMLDVDYFKQYNDRYGHPQGDQCLRDIAAALRSVVTRGEDVVARYGGEEFA 397 Query: 375 VIYTGGTLEELLSILKE---------IVHFQVGSINLSTSIGVA-------HSNECPTVE 418 ++ L + + I H ++ SIGV + E Sbjct: 398 LLLPDTDLPGAAEVARRLQERLAAMPISHAGSPCARITVSIGVTALQPQECQVQDARVRE 457 Query: 419 RLKMLADERLYKSKKNGRAQIS 440 + AD LY++K GR +++ Sbjct: 458 AVMARADRALYQAKNQGRNRVA 479 >UniRef50_Q1N3P2 Probable two-component response regulator n=1 Tax=Bermanella marisrubri RepID=Q1N3P2_9GAMM Length = 364 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 78/193 (40%), Gaps = 16/193 (8%) Query: 265 IINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDE------DLKALPE 318 + F + + D LT R+ FD DL + E Sbjct: 161 FLGRRFYNEYQRAFHIEMRLKENQVKLERLNETDTLTGIYNRQYFDNALDMQWDLASRSE 220 Query: 319 KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT 378 + D+D FK IND FGHL GD+VL + + R+GG+EFA+I Sbjct: 221 NSLSILFLDLDHFKKINDNFGHLAGDQVLCHAAHLFSEIARRKTDMIARYGGEEFAIILP 280 Query: 379 GGTLEELLSILKEIVHF--------QVGSINLSTSIGV--AHSNECPTVERLKMLADERL 428 ++ L + ++I H G I+L+ SIGV + + AD+ L Sbjct: 281 ATEKQDALDLAEQIRHAIENTPCRSDQGLIHLTVSIGVNSVVPSPQGSPVTFLDQADQAL 340 Query: 429 YKSKKNGRAQISW 441 Y++K NGR QI + Sbjct: 341 YQAKNNGRNQIMF 353 >UniRef50_A5UW82 Diguanylate cyclase n=2 Tax=Roseiflexus RepID=A5UW82_ROSS1 Length = 387 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 115/292 (39%), Gaps = 20/292 (6%) Query: 167 KSLAMDSENLMF-----SLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYK 221 L ++F SL N + N F + L V Y Sbjct: 85 IPLERVERFMLFFFIFQSLVFNSIVPALLRQHLDNLFLDTIGDDIWFLLIVCVLAVHLYD 144 Query: 222 KDVYLRVCTLIIFFAALVAVISGASC-LYLVRRVINRGIVEKEAIINNHFERVLDGGLFF 280 + ++ + + V+ S + + + ++ + ++ ++ Sbjct: 145 LRRGALIAGIVYSLSFAIVVVQIVSWNMPGIDGEDSEHVLRAYLMGGALLVFLVVLAMYR 204 Query: 281 SAADV--KKLYSMYNSAFLDDLTKAMGRKSFDED------LKALPEKGGYLCLFDVDKFK 332 S + + M N A+ D LT R+ ED L + +CLFD+D FK Sbjct: 205 SHIERLHTEYEVMANLAYTDTLTSLPNRRRLYEDVYRLIALAERYGQEFCVCLFDLDHFK 264 Query: 333 NINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI 392 +NDT GHL+GD+VL +V ++ + + R+GG+EF V+ L + + L+ + Sbjct: 265 RLNDTHGHLVGDQVLQEVAQVARLHLRA-ADLFGRWGGEEFVVLLPQTRLNDAQTALERV 323 Query: 393 V----HFQVGSIN-LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + +++ ++ S G+A T E L AD+ LY +K GR +I Sbjct: 324 RLALHTIALPNVHAITASFGIAAYLPGDTSESLLHRADQALYLAKATGRNRI 375 >UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobacterineae RepID=Q1D632_MYXXD Length = 710 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 16/165 (9%) Query: 289 YSMYNSAFLDDLTKAMGRKSF----DEDLKALPE--KGGYLCLFDVDKFKNINDTFGHLL 342 M A D LT ++F DE L + L L DVD FK++NDT+GH Sbjct: 527 EQMERMATTDGLTGLYNHRTFQAKADEVLAQSRRYQRKFSLILTDVDHFKSVNDTYGHPT 586 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF------- 395 GD+VL V +I+K+ + D V R+GG+EF +I + +I + I Sbjct: 587 GDQVLKGVARIIKT-MARDTDIVARYGGEEFVIIMPETDAKGAFTISERIREAVKAEVFQ 645 Query: 396 -QVGSINLSTSIGVA-HSNECPTVERLKMLADERLYKSKKNGRAQ 438 ++G + ++ S+G+A + ++L LAD+ LY SK+NGR Q Sbjct: 646 TEMGPLRITMSLGIATFPDSAMEKQQLIDLADQCLYHSKRNGRNQ 690 >UniRef50_A3UJW0 Stalked-cell differentiation controlling protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UJW0_9RHOB Length = 450 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 17/176 (9%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKS----FDEDLKALPEKGGYL--CLFDVDKFKN 333 ++ A +L + D LT R+ + L L L L D+D FK Sbjct: 268 YADALRDRLDESLEMSVRDALTGLFNRRYTVSRLRQALDGLRANHEPLTTALIDIDHFKR 327 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE-- 391 INDT+GH GD+VL ++ L Q+ R+GG+EF V+++ T E ++ Sbjct: 328 INDTWGHNAGDQVLKEICARLNEQLRAI-DIAGRYGGEEFLVVFSNTTAREACDAMERAR 386 Query: 392 --------IVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + IN++ S+GVA + +VE L AD LY +K++GR ++ Sbjct: 387 LAVCATPVTLRETGDIINVTMSVGVAEAFMDDSVEALIERADTALYDAKRSGRNRV 442 >UniRef50_Q7MRX3 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MRX3_WOLSU Length = 804 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 13/176 (7%) Query: 278 LFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDE------DLKALPEKGGYLCLFDVDKF 331 LF D+ + + A+ D LT+ R F+E +L ++ L +FD+D+F Sbjct: 626 LFGICQDITEQIELEKIAYYDSLTQIYNRNKFNELITREIELLKRYKQPLSLVIFDIDRF 685 Query: 332 KNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE 391 K INDT+GH +GDEVL ++ I+ +I R+GG+EF ++ + + ++ Sbjct: 686 KRINDTYGHRVGDEVLAELAGIVSREIRS-TDIFVRWGGEEFVIVTPQTPTQGAQLLAEK 744 Query: 392 IV------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 I F+ ++ S GV + ++E ADE LYK+K NGR Q+ Sbjct: 745 IRSKIEEWKFEGVEECVTCSFGVTNILRLESIESAIERADELLYKAKNNGRNQVVM 800 >UniRef50_A8VQE2 Putative diguanylate cyclase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VQE2_9BACI Length = 301 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 17/186 (9%) Query: 272 RVLDGGLFFSAADVKKLYSMYNSA-FLDDLTKAMGRKSFDEDLKA------LPEKGGYLC 324 ++D F ++K+L N A D+LT+ ++ E L A ++ L Sbjct: 115 MIMDDASFNQGVEMKRLLDQANLAAVTDELTRVYNKRYILEKLPADLTLALAEQQPFGLI 174 Query: 325 LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEE 384 + D+D FK++NDT+GHL GD++L + +LK RFGG+EF V G + Sbjct: 175 VADIDHFKSVNDTYGHLAGDQILREFAAVLKDTCLDQADWTARFGGEEFVVCLPGKDRDT 234 Query: 385 LLSILKE--------IVHFQVGSINLSTSIGVAHSNECP--TVERLKMLADERLYKSKKN 434 +L++ + + H+ +I L++S GV E L AD+ LY+SK+ Sbjct: 235 VLAVAERMRARIEEQVFHYDGQAITLTSSFGVYALAPGDVIDYETLLKRADQHLYQSKRT 294 Query: 435 GRAQIS 440 GR +++ Sbjct: 295 GRNRVT 300 >UniRef50_A8ZVJ7 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVJ7_DESOH Length = 410 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 104/276 (37%), Gaps = 30/276 (10%) Query: 186 PVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGA 245 P G Y + + + + + A ++L + +F +I + Sbjct: 136 PNAGHSYTGVALVILFAAIVIRIPF----WHAVALCGGLFLLHLLIFPWFQMPTDLIVHS 191 Query: 246 SCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKL----YSMYNSAFLDDLT 301 + + VI+ + I F R L D ++L + A D LT Sbjct: 192 ALVVFSVAVIS---LLGNYRIEREFRRAYLRAL-KMKIDARQLEGLNRQLEEMAVSDPLT 247 Query: 302 KAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILK 355 R+ FD L A L D+D FK ND GH GD L ++ L Sbjct: 248 GLFNRRHFDAHLDAEWRSAVREQLSISLIFIDIDHFKLYNDNHGHQAGDLCLKQIADTLT 307 Query: 356 SQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI-VHFQVGSIN---------LSTS 405 + R+GG+EF V+ +++ L + ++I H Q +I ++ S Sbjct: 308 ENVHRPGDACVRYGGEEFVVLLANTNMDQALYVAQKIQSHLQALAIPHGYSPVAGEVTVS 367 Query: 406 IGVAH--SNECPTVERLKMLADERLYKSKKNGRAQI 439 +GVA + T E L AD+ LY++K GR +I Sbjct: 368 MGVASMVPDRDDTPEDLLEKADKSLYRAKDAGRNRI 403 >UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8FZ07_SHESH Length = 298 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 22/191 (11%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYL 323 F V+ + D+ + Y++ D L R+ D LK E+ + Sbjct: 86 FVFVVCSLSLRTTRDIMQNYALKQENITDSLMGIFNRRYLDRRLKDETERALNYSQPLSI 145 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 L D+D FK +ND +GH +GD VL + +++K + + + RFGG+EF VI Sbjct: 146 FLIDIDHFKQVNDNYGHQVGDLVLKNIAQLIKHSLR-ESDVLARFGGEEFVVILPRTKDS 204 Query: 384 ELLSILKEIVHFQVG--------------SINLSTSIGVAHSN-ECPTVERLKMLADERL 428 ++ + + H SI+++ SIGVA N +C + L AD L Sbjct: 205 TSYTLAERLRHVVEDFQLTLPEESDKDSLSISVTVSIGVAGLNAQCKDCQCLIENADRAL 264 Query: 429 YKSKKNGRAQI 439 Y++K+NGR Q+ Sbjct: 265 YQAKRNGRNQV 275 >UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvestris BL2 RepID=B8EJQ5_METSB Length = 738 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 15/218 (6%) Query: 233 IFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKL-YSM 291 + +A + L +V ++ + + V D +++L S+ Sbjct: 504 LVLTIPMAELFANRVLGIVITLL--ATLMALIYLFGKERSVYDSVQMDKRLKLQELARSL 561 Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALP------EKGGYLCLFDVDKFKNINDTFGHLLGDE 345 A D LT R FD+ L A + L LFD+D FKNIND GH +GD Sbjct: 562 EFQASTDPLTGLFNRMKFDQALAAEILRANRYNRPLSLVLFDIDHFKNINDLHGHQVGDN 621 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI----- 400 VL+++ +I + I + R+GG+EF ++ + + + + ++ Sbjct: 622 VLVQLSRIAAAHIR-GTDVLARWGGEEFVILVPESNGQMAYQTAENLRNAIGQAVFEKAG 680 Query: 401 NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 ++ S GVA + E L AD +Y++K GR Q Sbjct: 681 AVTCSFGVAEYVDGDAAESLISRADAAMYRAKIKGRNQ 718 >UniRef50_Q2KVB5 Putative signaling protein n=1 Tax=Bordetella avium 197N RepID=Q2KVB5_BORA1 Length = 429 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 134/358 (37%), Gaps = 38/358 (10%) Query: 105 IQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSL 164 +++ +Y YR + + + + PV + I + + Sbjct: 79 LRLCLKNGDYFQG--STFNYRKDGSPYLVE-------WNISPVRGAQGGIEHFVSVQRDI 129 Query: 165 LSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKK-- 222 +++LA + L+ + + +FT Y ++ + Sbjct: 130 TARTLAQQRQALLAQALNATHDAVLIADDKGHILFTNQAFQRAIGYSAKEVHQLTPQATN 189 Query: 223 ------DVYLRVCTLII---FFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERV 273 D Y + ++I + + +VI E + + ++ + Sbjct: 190 SGQPHPDFYKNLLSVIHGGKRTRHTFPNQNAKGSNAYIEQVITTLTDESGS-VKHYISVL 248 Query: 274 LDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE------KGGYLCLFD 327 D F + + + D LT + R+ ++ L + + + D Sbjct: 249 KDISQFVAREKL-----LSKQVRSDALTGLLNRRGAAAKIQRLHRAAHQSGRFYSVIMAD 303 Query: 328 VDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLS 387 +D FK IND FGHLLGD VL + +++ + + V R+GG+EF ++ L + ++ Sbjct: 304 IDHFKKINDQFGHLLGDTVLKRCANLIRDNVR-EGDAVARWGGEEFLILLPNCPLIKAVA 362 Query: 388 ILKEIVHFQ---VGSIN--LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + + I + I ++ S+GV S+ T + L AD+ LYK+K GR Q++ Sbjct: 363 LAERIRNTIATLTDPITGQVTLSLGVGTSSPAETPQSLIQRADKALYKAKAQGRNQVA 420 >UniRef50_P77302 Uncharacterized protein ydaM n=63 Tax=Enterobacteriaceae RepID=YDAM_ECOLI Length = 410 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 15/175 (8%) Query: 278 LFFSAADVKKLYS-MYNSAFLDDLTKAMGRKSFDE-----DLKALP-EKGGYLCLFDVDK 330 + + K+L + ++A D +T + R+ F ++ L + L L D D+ Sbjct: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK 390 FK+IND +GH GDEVL + + L V+R+GG+EF ++ L+ LS+ + Sbjct: 295 FKHINDLYGHSKGDEVLCALARTL-ESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 Query: 391 EIVHFQVGSINL------STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 I V +++ + SIGVAH +++ L D+ LY++K +GR ++ Sbjct: 354 TI-RVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 >UniRef50_Q7MF60 GGDEF family protein n=69 Tax=Gammaproteobacteria RepID=Q7MF60_VIBVY Length = 348 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 20/222 (9%) Query: 235 FAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADV----KKLYS 290 F+ L V + V VI + E I H R L L ++ ++ ++L Sbjct: 127 FSKLEKVEDEGLSIEEVMGVIRELVTESREI--RHSTRFLTSQLNNASNEISRLKEQLAE 184 Query: 291 MYNSAFLDDLTKAMGRKSFDEDLKAL--PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLM 348 + A D L+ R++FD DLKAL ++ L L D+D FK ND +GHL GD V+ Sbjct: 185 VQRDALFDGLSTLYNRRAFDSDLKALVNAQQNLSLILLDIDHFKTFNDNYGHLFGDSVIR 244 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL----EELLSILKEIVHFQVGSI---- 400 + K L++ + YRFGG+EFA+I +L + S+ + I +V Sbjct: 245 AIAKRLQTSCR-EGIAAYRFGGEEFALIVPNKSLRIARQYAESLRRTIEKLKVKDKRSGQ 303 Query: 401 ---NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 N+S S GVA T E L AD+ LY++K+ GR ++ Sbjct: 304 QVENISASFGVAELKPDETAESLIERADKLLYEAKQLGRNRV 345 >UniRef50_A3WIT1 Putative two-component hybrid sensor and regulator n=1 Tax=Idiomarina baltica OS145 RepID=A3WIT1_9GAMM Length = 548 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 15/160 (9%) Query: 294 SAFLDDLTKAMGRKSFDEDLKAL------PEKGGYLCLFDVDKFKNINDTFGHLLGDEVL 347 A D LT A R+ F E L+ L E+ + FD+D FK IND FGH GD VL Sbjct: 388 QAERDPLTGAYNRRFFTEALETLVYRSERYEESLAIVTFDIDHFKRINDNFGHEAGDRVL 447 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE--------IVHFQVGS 399 +++V+ L + + R GG+EF+++ TL++ + ++ + Sbjct: 448 IELVQTLGRLVR-ESDIFARTGGEEFSLLLPNQTLQQATRTAERFRAALEALVIRSEGHE 506 Query: 400 INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 I ++ S GVA + T + AD+ LY +K GR + Sbjct: 507 IQVTASFGVAIHHNGATHNEVLRHADKALYAAKSRGRNCV 546 >UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clostridium thermocellum RepID=A3DHG2_CLOTH Length = 415 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 25/220 (11%) Query: 244 GASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFF-------SAADVKKLYSMYNSAF 296 CL + I GI++ + N+F+ L + + + L+ + +A Sbjct: 188 SYICLPITEGNITLGILQLYSKSKNYFDEALISKVKSYIEVAKPVISSKRTLHQLRKNAT 247 Query: 297 LDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKV 350 D LTK R+ ++ L E + + + D+D FK INDT+GH GD VL+ Sbjct: 248 TDKLTKLYNRRFLEQYLDNQLEITGFSNQKLSVIMMDIDNFKRINDTYGHNAGDAVLVTF 307 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF----------QVGSI 400 +++ + V R+GG+EF I + I + I V Sbjct: 308 ARVILRCLR-QTDLVARYGGEEFIAILPSSDTKNAYDIAERIRESIAAEPMPKINDVQLP 366 Query: 401 NLSTSIGV-AHSNECPTVERLKMLADERLYKSKKNGRAQI 439 N+S S GV + L AD LYK+K+ G+ ++ Sbjct: 367 NISCSFGVSTYPTHAKNKNDLIKAADIALYKAKQAGKNRV 406 >UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY29_9AQUI Length = 336 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 20/221 (9%) Query: 235 FAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNS 294 A++ L + R + ++ E++ I + F +++K + Sbjct: 115 LVAILGDKEPFGSLSVGRVMSSKPFTEEDGKILRSLAFIFS---FIVKEELEK-KRLLEK 170 Query: 295 AFLDDLTKAMGRKSFDE----DLKALPEKGG--YLCLFDVDKFKNINDTFGHLLGDEVLM 348 A +D LT R +E ++ G L +FD+D FK +NDT+GH +GD VL+ Sbjct: 171 AIIDHLTGLYNRFYLEEAGAREIARAKRYGFPISLIMFDLDNFKQVNDTYGHQVGDRVLV 230 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSI 400 K I+ S + R+GG+EF V+ EE + + + I F+ + Sbjct: 231 KFASIVSSNVRS-TDMPVRYGGEEFVVLLPHTYPEEAVKVAERIREEFEKFLFRFEGEVM 289 Query: 401 NLSTSIGVAHSNECP-TVERLKMLADERLYKSKKNGRAQIS 440 L+ S G++ N ++ L +AD+ +Y++K+ G+ +I Sbjct: 290 RLTVSAGISFCNSGECSLGELIQMADKAMYEAKEKGKNRIE 330 >UniRef50_Q1K430 Diguanylate cyclase n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K430_DESAC Length = 526 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 125/298 (41%), Gaps = 29/298 (9%) Query: 159 LERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVF 218 LE+F L++ + A ++ + F + Y S E A L T Sbjct: 234 LEKFPLVATAQAFKLQHQSYQKF---PAIPIKNYRG-------SVIGEIQAMLNTTGLEE 283 Query: 219 AYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGL 278 ++++ +Y + F + V+ + +L R + +E + + L+ L Sbjct: 284 SFERSLYHSALICLGVFIITIIVLHAGTGFFLQRVKQLQSQLETKVFRRTQALQTLNEKL 343 Query: 279 FFSAADVKK-LYSMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKF 331 + K+ ++ + D LT R+ F+ ++ L + D+D F Sbjct: 344 SQEIRERKRSQKALQKMSENDMLTNIYNRRKFNTYFSREWDAALREKRVVSLLMIDIDYF 403 Query: 332 KNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE 391 KN ND +GHL GD+ L+ V LK+++ + V R+GG+EF + +++ + + ++ Sbjct: 404 KNYNDHYGHLAGDDALIAVAATLKNKLTRPRDFVARYGGEEFVCLLPETSMDAAIYLAEK 463 Query: 392 IV----------HFQVGSINLSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGRA 437 + + V + +++ S+GVA E L AD+ LY++K+ GR Sbjct: 464 LRLEIQKLNYVHEYSVAAGHITISVGVASAIPTAGQAKEDLIDQADKALYRAKEAGRN 521 >UniRef50_B4RU26 GGDEF protein n=2 Tax=Alteromonas macleodii RepID=B4RU26_ALTMD Length = 946 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 22/245 (8%) Query: 210 YLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNH 269 Y+ + + F + +Y + +V + + E I+ Sbjct: 708 YIGGPWQEITSPFSIRVLPSIYQTFAFKFSVFLFFCFVIYALYKVRFHHLKKSEMILKQR 767 Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL------KALPEKGGYL 323 + + A DDLT R++FD L + L Sbjct: 768 VDEQTRSLELQT-------KRFEFQATHDDLTGIANRRAFDRWLVQYFEEAKAKQTPLCL 820 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 + D+D FK +ND + HL+GD+V+ +V +IL ++P K R+GG+EF V+ L Sbjct: 821 AVIDIDHFKQVNDQYSHLVGDKVITEVARILNREVP-HYAKCARWGGEEFTVLLPEYDLI 879 Query: 384 ELLSILKEIVH--------FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNG 435 + + F ++ ++ SIGVA ++ +R+ AD+ LY +K+NG Sbjct: 880 NARVAMDHVRKIVAAHDFSFIAQTLKVTISIGVASADGARDHDRMLTHADQALYTAKENG 939 Query: 436 RAQIS 440 R Q++ Sbjct: 940 RNQVT 944 >UniRef50_B1HMB6 Sensory box/GGDEF family protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HMB6_LYSSC Length = 782 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 78/284 (27%), Positives = 122/284 (42%), Gaps = 39/284 (13%) Query: 183 NGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVI 242 +G+ D N K AIF + TG + A + + IF L ++ Sbjct: 234 SGEISFKDNGNLKKAIFLTNAK--------TGWRIIAEIDQLKIAQSVKPIFNVTLFVLL 285 Query: 243 SGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGL-----FFSAADVKKLYSMYNS--- 294 ++ VI R I + ++ + +V +G L S + +KL YN Sbjct: 286 FAICLTSILISVIVRSITKPLQVLVDASVKVSEGDLSGHVIIKSQDEFQKLGDAYNHMID 345 Query: 295 -----AFLDDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNINDTFGHLLG 343 AF D LT R+ F L+ + + DVD FK +NDT GH G Sbjct: 346 SLSKFAFYDPLTNLPNRRQFVFTLEQAITQASSEQSKFSIIFIDVDNFKQVNDTLGHSAG 405 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT----GGTLEELLSILKE------IV 393 DE+L KV + L+S I + G V R GGDEF ++ LE++LS L++ + Sbjct: 406 DELLQKVAEQLQSSIGSE-GVVARLGGDEFVILLEHRADHAYLEKMLSSLRDSFVQPFTI 464 Query: 394 HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRA 437 H Q+ + +S I ++ + T E L AD +YK+K++G Sbjct: 465 HGQITFVQMSLGI-ASYPIDGVTQEELLKHADIAMYKAKESGGN 507 >UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5V1I0_ROSS1 Length = 681 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 17/166 (10%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVDKFKNINDTFGHLLG 343 A +D+LT R++F E+++ ++ + + DVD FK++NDT+GH G Sbjct: 504 EARRHATIDELTGVWNRRTFFENVRREFQRSQRTLHPLAILMIDVDHFKSVNDTYGHAAG 563 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF-------- 395 D+VL V + ++Q+ V + R+GG+EFAV + I + + Sbjct: 564 DQVLRGVAERCRNQLRVI-DIIGRYGGEEFAVALPETDIHAAGQIAERLRIAVERAPFVT 622 Query: 396 QVGSINLSTSIGVA--HSNECPTVERLKMLADERLYKSKKNGRAQI 439 GSI+L+ S+G A H ++ T++ + AD LY +K++GR + Sbjct: 623 DYGSISLTISVGAAVYHPDDHVTLDAVIDRADRALYIAKRSGRNSV 668 >UniRef50_C5BK03 Ggdef domain protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BK03_TERTT Length = 580 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 15/181 (8%) Query: 272 RVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCL 325 ++ S+ + L A D LT R++++E + + + + Sbjct: 391 AKVESIESESSKTKELLEEERYRATHDSLTGLPNREAYNERVYQEYRRFTRYSRPLGIAV 450 Query: 326 FDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL 385 D+D FK IND FGH GD VL + +++ +++ V R+GG+EF ++ + + Sbjct: 451 CDIDHFKKINDNFGHQTGDRVLKLIARLISTRLRKV-DFVARYGGEEFVILLPETSASQS 509 Query: 386 LSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRA 437 S+L +I F + ++ S G++ T+E AD+ LY++K +GR Sbjct: 510 RSVLDKIRAAVAKAAFRFGDDPVKITLSFGISAFRSDDTIETAFQRADKALYQAKADGRN 569 Query: 438 Q 438 + Sbjct: 570 R 570 >UniRef50_Q30RR7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30RR7_SULDN Length = 427 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 15/189 (7%) Query: 265 IINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKG---- 320 I++ H E ++ + K L +Y D LTK R FDE + + + Sbjct: 243 ILDLHGEVHELNAVYHDITNEKLLAELY---ITDSLTKLYNRAYFDETINMIVKHQRKAD 299 Query: 321 --GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT 378 L L D+D FK INDT+GH +GDEVL+ + K LK + D + R+GG+EF ++ Sbjct: 300 SDFILVLVDIDHFKLINDTYGHQVGDEVLVAIAKTLKGSLR-DNDLIARWGGEEFVIMLK 358 Query: 379 GGTLEELLSILKEIV-----HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKK 433 TL E +I++++ +I ++ S G+ + + AD+ LY++KK Sbjct: 359 NITLNEAKTIIEKVRVNIQNSIIRDNIKVTASFGLTKYIINEDSKEIFKRADDALYEAKK 418 Query: 434 NGRAQISWQ 442 +GR ++ + Sbjct: 419 DGRNRVVVR 427 >UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW02_9GAMM Length = 595 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 125/344 (36%), Gaps = 29/344 (8%) Query: 114 YCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDS 173 + D +++ + H K++ + K ++ + SL L+ ++ Sbjct: 250 FARDFLRIYPHTHPKSSRIV----KIILWAASGLVVA-SLFLPYFYVIRVLIICTILACV 304 Query: 174 ENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLII 233 L ++ E + S ++ + L F + +++ Sbjct: 305 MGLFAGFYRQV------EGYGVARFYLYSWSLFMLGAILVALNKFDVLPSNMITEYSMLF 358 Query: 234 FFAALVAVISGASCLYLVRRVINRGIVEKEAI-INNHFERVLDGGLFFSAADVKKLYS-M 291 V+S A + L R + EA+ + +L+ + + +++ + Sbjct: 359 GTGVGTVVLSAALAVRLNDEKNKRYHAQAEALRVQRESVELLEERVKERTSALREANEKL 418 Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDE 345 + D LT R+S DE L ++ + D+D+FK NDT GH +GD Sbjct: 419 EKLSNTDSLTGLNNRRSLDELLAMEVKRTCRTGAPLSAMMMDIDRFKAFNDTHGHQVGDA 478 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQV 397 L V ++ S V R+GG+EF V+ L+ I + I Sbjct: 479 CLKAVAGVIASTAQRPSDVVGRYGGEEFCVLLPDTPLDGAQIIAERIRAAVENLDFTVSG 538 Query: 398 GSINLSTSIGVAHSN--ECPTVERLKMLADERLYKSKKNGRAQI 439 + ++ SIGV+ + + L ADE LY +K GR + Sbjct: 539 QRVPVTISIGVSELTYCASDSGKALVEAADEALYSAKSAGRNCV 582 >UniRef50_A0LIF2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIF2_SYNFM Length = 352 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 21/178 (11%) Query: 282 AADVKKL-YSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNI 334 A +++L + A LD LT+ R+S D L + L L D+D FK Sbjct: 169 EAKLRELNRKLERLATLDGLTRVANRRSLDRFLDLEWRRTRRERAPMALILSDIDHFKLY 228 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH 394 NDT+GHL GD+ L V +K V R+GG+EFAV+ + + I + I Sbjct: 229 NDTYGHLAGDDCLRAVATAIKECAKRPMDLVARYGGEEFAVVLPNTNADGAVHIAETICR 288 Query: 395 FQVGSINL-----------STSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQI 439 +V ++ + + S GVA E T E L ADE LY++KK GR ++ Sbjct: 289 -EVENLRVRHPESSTGEFLTLSCGVAAMVPREESTPEALVAAADEALYEAKKQGRNRV 345 >UniRef50_B8G8L1 Diguanylate cyclase n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G8L1_CHLAD Length = 369 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 12/181 (6%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE------KGGYL 323 F ++ S + M AF+D LT R+ ++ L+ E + + Sbjct: 186 FIYIISRYRSISQRLQIEYQLMQEWAFIDMLTGLFNRRRCEQLLQTNIEYSRRYHQPLTI 245 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 CL+D+D FK +NDT+GH +GD+VL ++ ++ +S V R+GG+EF +I L Sbjct: 246 CLWDIDHFKQVNDTYGHEVGDQVLRQIARLAQSSTRS-TDLVGRWGGEEFCLILPHTCLS 304 Query: 384 ELLSILKEIVHF-----QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 E ++ + H +VG ++ S G+ + + L ADE LY +K GR + Sbjct: 305 EAEELVDRLRHLIKTQVRVGQQPVTASFGLVEYDTTDNLASLIRRADEALYAAKAAGRNR 364 Query: 439 I 439 + Sbjct: 365 V 365 >UniRef50_C5UZW0 Diguanylate cyclase n=2 Tax=Gallionellaceae RepID=C5UZW0_9PROT Length = 599 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 20/209 (9%) Query: 250 LVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADV-----KKLYSMYNSAFLDDLTKAM 304 L+ ++ V + + + +H E + SA + K+L + D LT A+ Sbjct: 388 LLDDIMQDTRVIQASALKSHEELLDSRKQVESAEEKISKLEKELSEVSELVHQDQLTGAL 447 Query: 305 GRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQI 358 R+ D + + L D+D FK +NDT GH +GD+ L+ + ++K + Sbjct: 448 NRRGLDAAFDRESRRVDRSHESLCIALLDIDNFKRLNDTMGHQVGDKALIHLCHVIKEAL 507 Query: 359 PVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSINLSTSIGVAH 410 V R+GG+EF +I TL E ++ + + I ++ S GVA Sbjct: 508 R-PSDSVARYGGEEFVLILPDVTLAEAALTVERLQRELTKQFFMHENDRILVTFSAGVAQ 566 Query: 411 SNECPTVERLKMLADERLYKSKKNGRAQI 439 + E L AD+ +Y++K+ G+ ++ Sbjct: 567 LAPNESQEELIGRADKAMYQAKQTGKNRV 595 >UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AX52_RUBXD Length = 378 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 14/193 (7%) Query: 259 IVEKEAIINNHFERVLDGGLFFS--AADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL 316 I ++ A + V S A +M+ A D LT R+S L+ Sbjct: 182 IAQQSAFLAAVIALVYATSYVKSQLARQRTLAEAMHRLAHTDPLTGISNRRSLYAALRRE 241 Query: 317 PE------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGG 370 E K + LFD+D+FK +NDT+GH GD L +V ++ + + R+GG Sbjct: 242 MEAARRYGKPLSVILFDLDRFKLLNDTYGHNQGDAALRRVAHTARAALRA-SDHLGRWGG 300 Query: 371 DEFAVIYTGGTLEELLSILKEIVHF-----QVGSINLSTSIGVAHSNECPTVERLKMLAD 425 +EF V+ L++ + + + G L+ S GVA + E L AD Sbjct: 301 EEFIVLAPETDLDQARHLAERLREAIALDRPPGRPPLTASFGVASCRPDDSPEDLLRRAD 360 Query: 426 ERLYKSKKNGRAQ 438 E LY++K GR + Sbjct: 361 EGLYRAKAGGRNR 373 >UniRef50_Q1YJ80 GGDEF domain n=2 Tax=Aurantimonadaceae RepID=Q1YJ80_MOBAS Length = 271 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 27/242 (11%) Query: 213 TGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFER 272 + +FA D + + + + V++ + L+L+ I + E+ + R Sbjct: 30 VSMAIFAKVADSEPSIVSGLFAATIVSLVVALGTGLFLILPTIRSQLREQGKL------R 83 Query: 273 VLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLF 326 L G L ++ + +A D LT R+ FD + + L LF Sbjct: 84 SLAGTLE------QRSQHLEQAALTDPLTGLRNRRCFDRMFEEYVVAFDRVGRPVGLLLF 137 Query: 327 DVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELL 386 D+DKFK +NDT+GH +GDEVL V L + + V R GG+EFA+I T + L+ Sbjct: 138 DLDKFKAVNDTYGHDVGDEVLKVVAGCL-TDFARHRDVVARLGGEEFAIIVTNMSAPGLV 196 Query: 387 SILKEIVH------FQVGSINL--STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 S + I +VG + L + S+G+A S + AD LYK+K+ GR + Sbjct: 197 SFAERIRQAISGLTIRVGDVKLRTTVSVGLASSEPGDGCAAIFKRADVNLYKAKQAGRNR 256 Query: 439 IS 440 +S Sbjct: 257 VS 258 >UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6W8_ALHEH Length = 382 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 17/228 (7%) Query: 228 VCTLIIFFAALVAVISGASCLYLVRRV-INRGIVEKEAIINNHFERVLDGGLFFSAADVK 286 + + + + +Y + + + R + + V + A + Sbjct: 147 LTVFPLTLREALGYLLPVLLVYTLLEIAVGRTLDLQSLGGLWLLVLVALVAAWSVAGQLL 206 Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGH 340 L +Y A D LT R++ E ++ + + LFD+D+FK IND GH Sbjct: 207 MLLRLYRQATRDPLTGLFNRRALTEQIERERARFLRTGRPLTVLLFDLDRFKRINDHHGH 266 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH------ 394 L+GD VL +++ + R+GG+EF T E+ + + + Sbjct: 267 LVGDRVLQVFANVVQQNLRT-TDHFGRWGGEEFLAALPETTSEQARVVAERVRQACENER 325 Query: 395 ---FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + S+ +TSIGVA + T++ L DE LY +K GR ++ Sbjct: 326 LTLAEGPSLGFTTSIGVATLHRDETLDSLFNRVDEALYNAKAYGRNRV 373 >UniRef50_A8H9R4 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8H9R4_SHEPA Length = 396 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 29/178 (16%) Query: 288 LYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVL 347 L +N A+ D+LT R+S + L K L + D+D FK NDT+GH +GD+VL Sbjct: 220 LVRSHNLAYRDELTGLASRRSLN-TLAHSLNKHYCLAMVDIDHFKKFNDTYGHDVGDQVL 278 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV-------------- 393 V K L GKV+R+GG+EF +++T +E +L +L+EI Sbjct: 279 QLVAKKLSKV--EGGGKVFRYGGEEFTIVFTNKNIEAVLPLLEEIRRKISQYNIVLRNQR 336 Query: 394 ------------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 H +N++ SIGVA + + E AD+ LYK+K NGR Q+ Sbjct: 337 RKNQSKLNRDEGHKTNPVVNITISIGVAEQHGETSFENTLKRADKALYKAKNNGRNQV 394 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 73/326 (22%), Positives = 126/326 (38%), Gaps = 32/326 (9%) Query: 144 LYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSE 203 LYPV + L+ + F L + E +N T EY +AI + + Sbjct: 366 LYPVEIHLELVEFDKEKVFVALVIDITERREMEKELKERNEILSTIMEYAG-DAIIMIDD 424 Query: 204 AMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVR-----RVINRG 258 + + P + Y K+ + + + + R V+ + Sbjct: 425 NGKVTFWNPAAERILGYSKEEIIGKDLHMFMIQDMRLYEAYREAFKKFRLTGKGSVVGKT 484 Query: 259 IVEKEAIINNHF---------ERVLDG----GLFFSAADVKKLYSM-YNSAFLDDLTKAM 304 + K N H R+ D G+ ++ K+ + Y + D LT Sbjct: 485 VEMKTRHKNGHEIDVELSLSAVRIKDSWHAIGIIRDISERKRFEELLYRQSITDPLTNIY 544 Query: 305 GRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQI 358 R+ F + L+ E+ L +FD+D FKN+ND FGH GD VL V +K +I Sbjct: 545 NRRFFMQMLEQEIERVKRNKKLFSLIMFDLDHFKNVNDRFGHAAGDMVLKSVADTVKGRI 604 Query: 359 PVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE----IVHFQVGSI-NLSTSIGVAHSNE 413 R+GG+EF ++ +L + +E I ++ I ++ S GV Sbjct: 605 R-KTDYFARWGGEEFIILLPETSLNNAAELAEELRKKISETELDGIGKVTASFGVTEYRN 663 Query: 414 CPTVERLKMLADERLYKSKKNGRAQI 439 TV+ + + D LY++K +GR + Sbjct: 664 TDTVDTVLLRVDGALYEAKGSGRNCV 689 >UniRef50_Q2VZ27 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VZ27_MAGSA Length = 355 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 17/170 (10%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDE----DLKALPE--KGGYLCLFDVDKFKNINDTFG 339 + + + A D LT+ R+ F+ +L + L D+D FK INDT+G Sbjct: 183 RHMAELEELASRDSLTQTANRRHFEHLAGLELDHARRMGRSFALLALDIDHFKRINDTWG 242 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE-------- 391 H GDE L + + + + R GG+EFAV + I + Sbjct: 243 HAAGDEALKAFANACRLSLR-EYDILGRIGGEEFAVALPNTGPDGARVIAERLRAAVEEL 301 Query: 392 -IVHFQVGSINLSTSIGVAHSNECP-TVERLKMLADERLYKSKKNGRAQI 439 + + +L+ SIG+A E TVE + AD+ LY++K +GR ++ Sbjct: 302 VVRPAKGELFDLTVSIGIAQLREGDLTVETMLERADQALYRAKNSGRNRV 351 >UniRef50_C1SJT9 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJT9_9BACT Length = 300 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 19/187 (10%) Query: 271 ERVLDGGLFFSAADVKK----LYSMYNSAFLDDLTKAMGRKSFDEDL------KALPEKG 320 E+ + GL + DV + + +++D LT A R++F+ L EK Sbjct: 111 EKGVIEGLMINIHDVTENAVLERHLKELSYIDGLTGAYNRRTFEHRLAEEFNRHKRDEKP 170 Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 + +FD+D FKNIND +GH GD VL + K+ K ++ + + R+GG+EF + Sbjct: 171 LGIIMFDLDFFKNINDKYGHQFGDVVLQQTAKLCKEKLRTE-DFLARYGGEEFVCLLINQ 229 Query: 381 TLEELLSILKEIVHFQVG--------SINLSTSIGVAHSNECPTVERLKMLADERLYKSK 432 +++ + + + S++++ SIG++ S T E L AD+ LY++K Sbjct: 230 NVDQTYLVAERLRESLEKAVISNGDVSVSITISIGISDSKYASTPEELIQCADKALYEAK 289 Query: 433 KNGRAQI 439 NGR + Sbjct: 290 NNGRNTV 296 >UniRef50_B9Z7N2 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z7N2_9NEIS Length = 515 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 10/186 (5%) Query: 263 EAIINNHFE--RVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK--ALPE 318 EA+ + +FE ++ L A ++L + D LT R+ D L Sbjct: 326 EAVRSWYFEAQQLKQALLVGMRAMQQQLNRFRQESNTDALTGLGNRRELDSVLDDWKYSR 385 Query: 319 KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT 378 + + + D+D FK++ND++GH GD+ L + ++++ + V R GG+EF ++ Sbjct: 386 QPFAVLMIDIDFFKSVNDSYGHDTGDQALTALAQLMRDSAR-EGDVVCRMGGEEFVMLLP 444 Query: 379 GGTLEELLSILKEIVH----FQVGSIN-LSTSIGVAHSNECPTVERLKMLADERLYKSKK 433 G + + + ++V + L+ SIGVA T E L AD+ LY++K+ Sbjct: 445 GADAIGAERVAERLCSRVEAYRVPGLPALTVSIGVAAGIADETPEALLREADDALYQAKQ 504 Query: 434 NGRAQI 439 GR ++ Sbjct: 505 QGRNRV 510 >UniRef50_UPI0001B9EDE1 diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EDE1 Length = 331 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 11/160 (6%) Query: 291 MYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTFGHLLGD 344 + + D LT R+ F E L+ L + D+D FK +NDT+GH GD Sbjct: 161 LLELSNTDKLTGLKNRRFFQERLEEQLMQYNHNRIPLSLFIIDIDHFKRVNDTWGHGYGD 220 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH----FQVGSI 400 EVL V ILK+ ++ V R+GG+EF +I E+ + + + F + Sbjct: 221 EVLFDVATILKTH-ALEGETVARYGGEEFVMILPETDAEKAKAGAERLRRAVQDFSWKTG 279 Query: 401 NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 +++ SIG+ +N L ADE LY SK+NGR Q++ Sbjct: 280 SMTISIGIITANPDDNEATLLQKADEALYASKQNGRNQVT 319 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 17/169 (10%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLG 343 + + LD LT+ R FD L + L L DVD FK NDT+GHL G Sbjct: 1091 ELKKLSCLDGLTQVANRHRFDMYLDQEWRRLMRSQQFLSLILCDVDHFKGYNDTYGHLAG 1150 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV---------H 394 D+ L +V +++K+ + V R+GG+EFA+I L L + ++I H Sbjct: 1151 DQCLQQVAQVIKNAVGRPADLVARYGGEEFAIILPDTPLRGALYVAEQIRQQVQYLTIPH 1210 Query: 395 FQVGSINLSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQISW 441 Q ++ S GVA + + + L ADE LY++K NGR Q+ + Sbjct: 1211 PQSTHQWVTLSSGVASFIPSAALSPKALINAADEALYQAKANGRNQVVF 1259 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 20/191 (10%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK----ALPEKGGYL-- 323 VL L+ + + + A D +T+ F+ L +G L Sbjct: 389 LAEVLGLHLYMIVIQQRLTRLIRHQASYDVITQLPNGIIFNHRLSLALVDAVNQGNMLGV 448 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGK---VYRFGGDEFAVIYTGG 380 + D+++FK IND+ GH +GD +L KV L++ + + R+ G F ++ + Sbjct: 449 VILDLNQFKRINDSLGHGVGDFLLTKVRDRLQNALDTYSIFNPLLARWHGARFIILLSKL 508 Query: 381 TL--------EELLSILKEIVHFQVGSINLSTSIGVAH-SNECPTVERLKMLADERLYKS 431 + ++LL+ +E + Q +I L S+G+A + T E L A+ +Y++ Sbjct: 509 SYSDESVMVCQKLLNDFQEPFYVQSQAIYLGASLGIALAPYDGDTAEILLKNAESAMYEA 568 Query: 432 KKNGRAQISWQ 442 KK G+ ++Q Sbjct: 569 KKQGKN--TYQ 577 >UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IJX5_PSEHT Length = 621 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 34/261 (13%) Query: 213 TGLYVFAYKKDVYLRVCTLIIFFAA-----LVAVISGASCLYLVRRVINRGIVEKEAI-- 265 +GLY+F + ++ +C+L F+ + ++ + + +I + + + Sbjct: 348 SGLYIFTNSRVAFVFICSLSCAFSLGYAVMKLFILQRDEQVTTQQTLIAKSAAQDALLHE 407 Query: 266 -------INNHFERVLDGGLFFSAADVKKL----YSMYNSAFLDDLTKAMGRKSFDEDL- 313 + E +D F +++L + D LT R+ FD+ L Sbjct: 408 RLSLQESVRQELETQVDERTFELQVTLRELEEKNRELEQLNMEDPLTGIKNRRFFDKKLV 467 Query: 314 -----KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRF 368 + + + D+DKFK INDT+GHL GD+V+ +K Q+ +V R+ Sbjct: 468 MELRRSRREQTPLSVIMLDIDKFKVINDTYGHLTGDQVIRTAADTIKKQLQRPLDEVARY 527 Query: 369 GGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIGVAHS--NECPTVE 418 GG+EF V+ + ++I ++I VH +I+ + S GV S + E Sbjct: 528 GGEEFVVLLPNTQNDGAIAIAEKIRHAIATNNVHVAGTTISFTISAGVYTSVAEDINNPE 587 Query: 419 RLKMLADERLYKSKKNGRAQI 439 AD+ LY +K++GR Q+ Sbjct: 588 IFTERADKALYFAKQHGRNQV 608 >UniRef50_A9WGU1 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WGU1_CHLAA Length = 324 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 20/198 (10%) Query: 260 VEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSA---FLDDLTKAMGRKSFDE----- 311 +E A + H AA+ + ++ A +D LT R F E Sbjct: 126 LEVLARVRTHLALAQARKALE-AANRELQRALAREAELARMDWLTGVYNRSHFYELARHE 184 Query: 312 -DLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGG 370 + E+ +C+ DVD FK IND +GHL+GD+VL V + + QI + RFGG Sbjct: 185 FAIATRYERPLTMCMLDVDHFKQINDRYGHLVGDQVLRAVAQTVAHQIRT-ADSIGRFGG 243 Query: 371 DEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIGVAHSNECP-TVERLK 421 +EF ++ L L++ + + VH G + + S+GVA T+ERL Sbjct: 244 EEFILLLPNTNLPSALTLAERLRVTIADLQVHTDRGIVTATISVGVAERQSTDTTIERLI 303 Query: 422 MLADERLYKSKKNGRAQI 439 AD LY +K+ GR + Sbjct: 304 DRADRALYAAKRQGRNCV 321 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 21/205 (10%) Query: 252 RRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYS-MYNSAFLDDLTKAMGRKSFD 310 + ++NRG+V + + G + K+L + A +D LT R+ F Sbjct: 386 KWLLNRGMVISRSSDGKPLRMI---GTSTDITERKQLEEELKRQARIDFLTGVSNRRYFM 442 Query: 311 EDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGK 364 E + ++ + D+D FK +NDT+GH GD VL ++ + + + + Sbjct: 443 EQAEQEIQRTSRYDTPLSFFMLDIDLFKQVNDTYGHKSGDIVLKRMASVCRETLR-EIDI 501 Query: 365 VYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS---------INLSTSIGVAH-SNEC 414 + R GG+EFA++ + + + + I + SIGVA + Sbjct: 502 IGRVGGEEFAILLPETDKAQAAEVAERLRSVLADEKVPTEAGAPIQFTVSIGVASRVSSQ 561 Query: 415 PTVERLKMLADERLYKSKKNGRAQI 439 ++ L LADE LY++KK GR ++ Sbjct: 562 DNIDMLLNLADEALYQAKKYGRNRV 586 >UniRef50_C5B8C0 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=C5B8C0_EDWI9 Length = 351 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 121/316 (38%), Gaps = 24/316 (7%) Query: 145 YPVTHNRSLIFLLGLERFSLLSKSLAMDSE---------NLMFSLFKNGKPVTGDEYNAK 195 P++ + GL + L + ++ L+ + F G G Sbjct: 38 SPLSGRILWGMVAGLLSWYLTGSKIYFTAQIHYTFEIVPMLLVTFF--GGWCAGLTAWLL 95 Query: 196 NAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVI 255 N I T +++ ++ L + I +LV + + V R I Sbjct: 96 NFITTGGFVLDNL-FIGMMLAPVLLARVWRRNTLRTFILCISLVTLFRLLIVIPYVTRRI 154 Query: 256 NRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA 315 V I+ V L + +++ SA D LT+ R+ + + Sbjct: 155 YLLDVLLHQTISYFCLLVCYQTLALKQRSISAYFTLSESALRDQLTQTNNRQGLQQQILR 214 Query: 316 LPEKGGY--LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEF 373 L + + D+D FK IND +GHL GD VL + I + + + RFGG+EF Sbjct: 215 LEHSRSACCIAMIDIDNFKQINDRYGHLCGDRVLTAIAAIASQTLQ-PRDYMARFGGEEF 273 Query: 374 AVIYTGGTLEELLSILKEIVHF---------QVGSINLSTSIGVAHSNECPTVERLKMLA 424 +++ G TLE + ++I I S S G+++ + ++++ A Sbjct: 274 VILFPGKTLERANARCEQIRQAICATPLYLCHDQQIRASASFGLSYFDGRDSLQQAIARA 333 Query: 425 DERLYKSKKNGRAQIS 440 D LY++K+ G+ ++ Sbjct: 334 DGALYRAKRRGKNRVE 349 >UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXG9_HALOH Length = 499 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 14/189 (7%) Query: 265 IINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL----KALPEKG 320 I+ + F + + A D LT F L K + Sbjct: 310 ILQHSFLESFANQFSVALQNALLYKKQEEMANRDGLTGLYNHAYFQNRLHLLLKQENKHP 369 Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 L + D+D FK +ND FGHL+GD+VL ++ +LK + + + R+GG+EFA+I Sbjct: 370 LTLIIMDIDNFKQVNDRFGHLVGDKVLKELAHLLKHNLR-EGDLIARYGGEEFAIILPET 428 Query: 381 TLEELLSILKEIVHF---------QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKS 431 L++ I K + S+ ++ SIGVA N+ + E AD+ LYK+ Sbjct: 429 ELKQGEFIAKRLRKLISDNEIVLDNNRSLYITVSIGVAQYNKKWSQEEFIDKADQALYKA 488 Query: 432 KKNGRAQIS 440 K+ G+ +++ Sbjct: 489 KEAGKNRVT 497 >UniRef50_Q2SHG3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHG3_HAHCH Length = 555 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 19/211 (9%) Query: 248 LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLY-SMYNSAFLDDLTKAMGR 306 L+ V+R+ G + N ++ +F ++ K + A D LT R Sbjct: 334 LFEVKRL--TGTFNSMSRSINELRNNIESQVFERTKELDKENLELREIAARDSLTGLYNR 391 Query: 307 KSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV 360 + F L + G L L D+D FK INDT GH GDEVL+++ L + Sbjct: 392 RFFQNRLNYEFNRAKRYGSGLTLVLLDIDHFKIINDTKGHPAGDEVLIRLSSFLSQSLRS 451 Query: 361 DKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHS- 411 + R GG+EF +I E + + + + + + ++ S GVA Sbjct: 452 -SDLIARIGGEEFCIILPEHLDEGVKTFIDRLRIEISLLDFQHEGEAFQVTCSFGVAEYR 510 Query: 412 NECPTVERLKMLADERLYKSKKNGRAQISWQ 442 NE + + ADE LY++K+ GR +I ++ Sbjct: 511 NESSHPKDILKKADEALYQAKRTGRNRIVYE 541 >UniRef50_A8UWW7 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWW7_9AQUI Length = 540 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 60/267 (22%), Positives = 120/267 (44%), Gaps = 29/267 (10%) Query: 204 AMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGI---- 259 + L L + ++K+ + V +++ F + ++ S + + I Sbjct: 274 TYRDISSLSAALALESFKRLMKSYVPLMLLVFLGSLLILGRISDRVERLKRVTELIKRRK 333 Query: 260 ---VEKEAIINNHFERVLDGGLFFSAADVKKLYSM--------YNSAFLDDLTKAMGRKS 308 +E + ++ + A +++K ++ + A++D LT R++ Sbjct: 334 FKELEGLSPSGKDEFGEIESAILSMAHEIEKYINVLSKEIEVYTSKAYMDSLTGVFNRRA 393 Query: 309 FDEDLKALPE------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDK 362 FDE + L E K + + DVD FK +ND+ GH +GD+VL ++ ++++ + + Sbjct: 394 FDEFGRELIERFLTLSKPISVLMIDVDDFKRVNDSHGHQVGDQVLAELGRLIRETLR-ET 452 Query: 363 GKVYRFGGDEFAVIYTGGTLEELLSILKEIVH------FQVGSINLSTSIGVAHSNECPT 416 V+R+GG+EF + G +LE L ++ F G ++ S+GVA E Sbjct: 453 DIVFRYGGEEFLALLPGTSLEGALRAGDKVRRRVEAHSFPPGDQRITVSVGVAQGTEGDE 512 Query: 417 -VERLKMLADERLYKSKKNGRAQISWQ 442 E + AD LY +KK G+ ++S + Sbjct: 513 RAEDVVSRADRALYIAKKTGKNRVSSE 539 >UniRef50_Q1K1C2 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1C2_DESAC Length = 398 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 29/216 (13%) Query: 250 LVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSF 309 ++ + + + + V+ GL V Y AF D+LT R++F Sbjct: 183 VLLWALLLICTAQLSDVQARVPVVVLHGLLILIVLVSVFERSYTLAFRDELTGLPSRRAF 242 Query: 310 DEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFG 369 + + G L + D+D FK +NDT GH +GD+VL +V L + + GK +R+G Sbjct: 243 LDFVNRRS-SGYSLAIVDIDHFKKVNDTHGHDVGDQVLKRVAGRLAAV--SNGGKAFRYG 299 Query: 370 GDEFAVIYTGGTLE---ELLSILKEIV-----------------------HFQVGSINLS 403 G+EF V++ +E + L +L++ + + S+ ++ Sbjct: 300 GEEFVVLFYRRDVERVNDALDLLRQSIADTPFVLRQKPRPEKRPRRVVATKDRQPSLRVT 359 Query: 404 TSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 SIGV+H ++ ++ + AD+ LYK+KK GR ++ Sbjct: 360 VSIGVSHWHKGADLDGVIKRADQALYKAKKTGRNRV 395 >UniRef50_C0ZHK6 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHK6_BREBN Length = 746 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 9/158 (5%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY--LCLFDVDKFKNINDTFGHLLGDEVL 347 M D+LT R+ +E ++ EK Y L L D+D FK +NDTFGH +GDEVL Sbjct: 587 EMERMVITDNLTGLYTRRHLNERVRGSLEKDNYGSLILIDIDYFKTVNDTFGHQVGDEVL 646 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--FQVGSINLSTS 405 ++V +++ I D R+GG+E AV S+ + I Q S ++ S Sbjct: 647 IQVSNLIRHSIR-DSDIAARWGGEELAVYLPRVDKNTAHSVAERIRECVEQETSPQVTIS 705 Query: 406 IGVAHSNECP----TVERLKMLADERLYKSKKNGRAQI 439 G+A + +VE L AD LY++K +GR Q+ Sbjct: 706 CGLAKWSREMDVNLSVEALFHQADIALYEAKNSGRNQV 743 >UniRef50_O66623 Putative uncharacterized protein n=1 Tax=Aquifex aeolicus RepID=O66623_AQUAE Length = 338 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 20/201 (9%) Query: 260 VEKEAIIN---NHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL 316 VEKE IN + E + + S +K++ S + +D LT + R+ L+ + Sbjct: 139 VEKEDFINALLYYSEYMKNVYRAISLLSLKQIRSFSKALKVDPLTGLLNRRVLPYILRDV 198 Query: 317 ------PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGG 370 E + + D+D FK INDT+GHL GD+VL +V KI+K + V+R+GG Sbjct: 199 LELSLYTETPFSIAMVDIDNFKKINDTYGHLFGDKVLKEVAKIIKKNLRR-SDYVFRYGG 257 Query: 371 DEFAVIYTGGTLEELLSILKEIVH--------FQVGSINLSTSIGVAH--SNECPTVERL 420 +EF ++ L++ + IL++I +Q I ++ S+GV N + E Sbjct: 258 EEFLILMPSTELKDAVRILEKIRKEVENTPICWQGKEIRVTISVGVCSDVYNGLKSPEEY 317 Query: 421 KMLADERLYKSKKNGRAQISW 441 ADE+LY +K+ G+ ++ + Sbjct: 318 IKCADEKLYLAKRTGKNRVVF 338 >UniRef50_C6CQG0 Diguanylate cyclase n=7 Tax=Enterobacteriaceae RepID=C6CQG0_DICZE Length = 491 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 15/165 (9%) Query: 288 LYSMYNSAFLDDLTKAMGRKSFDEDLKALP------EKGGYLCLFDVDKFKNINDTFGHL 341 + A D LT M R++F+ + L + + L D+D FK IND +GH Sbjct: 323 QRRLELMATTDKLTGLMNRQAFEYVFRTLRIKQSTQHRTFSIILIDLDYFKKINDQYGHH 382 Query: 342 LGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH------- 394 +GD VL++ ++++ I R+GG+EF ++ + + I ++I Sbjct: 383 VGDRVLVRTARLIQRTIR-KTDSACRWGGEEFVLLLADCSRSQAHFIAEKIRRAIRFALV 441 Query: 395 -FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 Q INL+ S G+A S+ +++ L AD LY++K+ GR Q Sbjct: 442 SHQHQVINLTISCGIAESHPGESIDHLVQRADNALYQAKRQGRDQ 486 >UniRef50_Q2BLZ2 GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLZ2_9GAMM Length = 385 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 15/174 (8%) Query: 281 SAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNI 334 + + L +Y A D LT R+ E L K + LFD+DKFK+ Sbjct: 208 AVNQLNMLLGLYRQATRDPLTGLANRRQAMEQLSGDMKLMREKSKPLSVLLFDLDKFKSF 267 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV- 393 NDT+GH GD VL + K+++ V R+GG+EF ++ G E+ + ++I Sbjct: 268 NDTYGHAAGDIVLQRFAKVMRKFARKRLDLVCRYGGEEFLMVLPGLDAEQAGEVAEKIRL 327 Query: 394 --------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 I +TSIGVA T++ L +D+ LY++K GR ++ Sbjct: 328 ACYDEQVKTPTGERIGFTTSIGVAELKAEDTIDSLLQHSDDALYEAKGTGRDKV 381 >UniRef50_Q2IXE2 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Alphaproteobacteria RepID=Q2IXE2_RHOP2 Length = 457 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 18/177 (10%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKN 333 ++ + A D LT R+ + L L E+ G L + D+D FK Sbjct: 277 YTDHLRDNVQHSIEMAITDGLTGLHNRRYMESHLATLAEQAGSRGKPLALMILDIDFFKA 336 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 INDT+GH GD+VL + +K I R+GG+EF ++ L+ + + + Sbjct: 337 INDTYGHDAGDDVLREFAVRIKKSIRGI-DLACRYGGEEFVIVMPETDLQVAQMVAERLR 395 Query: 394 HFQVGS----------INLSTSIGVAHSN-ECPTVERLKMLADERLYKSKKNGRAQI 439 G I ++ SIG++ + V L AD LY++K +GR ++ Sbjct: 396 RAIAGEPFAIEKGTKRIAVTISIGLSTLERKGEAVRDLLKRADTALYRAKHDGRNRV 452 >UniRef50_Q12JJ7 GGDEF domain n=1 Tax=Shewanella denitrificans OS217 RepID=Q12JJ7_SHEDO Length = 580 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 22/249 (8%) Query: 209 AYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAI--I 266 A LP G + K +Y LI + L+ + + ++ I + I + + + Sbjct: 329 ALLPQGSKLVGEPKSLYQEYGGLI--NSVLLLLTFLMLVISVLLTNIRKRIAVQIQLDKL 386 Query: 267 NNHFERVLDGGLFFSAADVKKLYS----MYNSAFLDDLTKAMGRKS-------FDEDLKA 315 N E + +L+ M AF D LT R++ + K Sbjct: 387 NRELEFQVQERTQDLNLRNSQLHDATINMRQLAFTDPLTGLSNRRAGTVETGAYLSRFKQ 446 Query: 316 LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAV 375 + + D+D FK +NDT+GH GDEVL+ ++LK+ + ++YR+GG+EF V Sbjct: 447 -DNLALSVAILDIDFFKRVNDTYGHSRGDEVLISFARLLKATVR-PSDRLYRWGGEEFLV 504 Query: 376 IYTGGTLEELLSILKEIVHFQVGSI-----NLSTSIGVAHSNECPTVERLKMLADERLYK 430 ++ G + + + + H +++S+GV ++ +++ L AD LY+ Sbjct: 505 LFPGADIAAATQVCERLCHTIASKHFEGVGRITSSLGVTEASLDDSLDSLVSRADVALYQ 564 Query: 431 SKKNGRAQI 439 +K+ GR ++ Sbjct: 565 AKQQGRNRV 573 >UniRef50_C9PKI6 GGDEF domain protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PKI6_VIBFU Length = 489 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 25/260 (9%) Query: 192 YNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLV 251 Y N + +VF K I++F I+ LY+ Sbjct: 232 YYYSNLSNPEWYVIYEVPKRSLNRFVFHESKS--------IVYFLTFSLTINTLCWLYMR 283 Query: 252 RRVINRGIVEKEAIINNHFERVLDGGLFFSAA---DVKKLYSMYNSAFLDDLTKAMGRKS 308 RR+ VEK + + G L + A ++ ++ + +D LT R++ Sbjct: 284 RRI---QQVEKHLVTGLMKATPVPGNLNIADAIHLLSERRNTLRKESLIDGLTGLNNRRA 340 Query: 309 FDEDLKALPEKGGYL-CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 D DL +L E G L + D+D FK+INDT+GH GD VL I ++Q+P ++YR Sbjct: 341 LDNDLPSLIEDGATLVAMLDIDYFKSINDTYGHQTGDTVLKTFAAIAEAQLPPQSTRIYR 400 Query: 368 FGGDEFAVIYTGGTLEELLSILKEIV------HFQVGSINLSTSIGVAHSNECPTVERLK 421 +GG+EF +++ T + L +L+++ + G ++ S G+A + + Sbjct: 401 YGGEEFVIVFVRVTPSQALEMLEQLRLSIAQYQWHQGPHQVTFSAGLASCADADAIALAD 460 Query: 422 MLADERLYKSKKNGRAQISW 441 LY++K++GR +I + Sbjct: 461 AR----LYEAKRSGRNRIIY 476 >UniRef50_C1XYG3 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYG3_9DEIN Length = 354 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 12/166 (7%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFG 339 + + M A D LT+ R+ + LK ++ + L D+D FK +ND G Sbjct: 180 ENMLIMEQLAHTDHLTRLTNRRGLEPLLKQELQRAERYGLPFAVLLADLDHFKEVNDRHG 239 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF---- 395 H +GD+VL +V L + V R+GG+EF ++ L + + + ++ Sbjct: 240 HAIGDQVLREVAPRLDHNLR-QADTVARWGGEEFLILAPTTDLAQAGQLAERLIEVIRSE 298 Query: 396 -QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 VGSI ++ SIGV+ ++E L ADE LY++K GR ++ Sbjct: 299 PVVGSIPVTISIGVSCYRAGDSLESLLQRADEALYRAKALGRNRLE 344 >UniRef50_A3QI98 Diguanylate cyclase n=1 Tax=Shewanella loihica PV-4 RepID=A3QI98_SHELP Length = 401 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 75/324 (23%), Positives = 132/324 (40%), Gaps = 27/324 (8%) Query: 139 TFVYYLYPVTHNRSLIFLL--GLERFSLLSKSLAMDSENLMFSLFKN-GKPVTGDEYNAK 195 +++Y+L LL G +R LS S+ +D L+ + +P + + Sbjct: 64 SYLYWLGADMLLLLGFVLLRSGTQRLFRLSSSIKIDLALLLLTGLSMLTQPPSIAASDTL 123 Query: 196 NAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVI 255 F+ A L A + V + +++ AL+ VI G L L+ Sbjct: 124 GIFFSFMAASTFLLMAKDNL--VALEHTVKRPIAVILLSPIALMGVIFGLRALLLLIEPA 181 Query: 256 NRGIV---EKEAIINNHFERVLD----GGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKS 308 + + + I + V+ + A + + M A D LT R++ Sbjct: 182 LKSHLASIQSADAIPMLWLYVVMTLWINVIMMGNALTRLVQKMRQQADRDYLTGLWNRRA 241 Query: 309 FDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDK 362 + L+ L ++ L LFD+D FK IND FGH GD VL+K + + Sbjct: 242 MQQQLEQLHQRWLRDGQAYSLILFDLDFFKQINDKFGHSAGDAVLVKTAQQIGKVTRAM- 300 Query: 363 GKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIGVAHSNEC 414 R GG+EF ++ G E I +++ +++Q I +S S G+ + Sbjct: 301 DIFCRLGGEEFLLVLPGTDGEVAEIIAQKLQQALRQSSLNWQGSLIPISASFGIVTTATG 360 Query: 415 PTVERLKMLADERLYKSKKNGRAQ 438 T + L LAD+ +Y++K+ GR + Sbjct: 361 DTPDSLLALADKAMYRAKETGRDR 384 >UniRef50_C6MLU9 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Geobacter sp. M18 RepID=C6MLU9_9DELT Length = 465 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 9/173 (5%) Query: 276 GGLFFSAADVKKLYSMYNS-AFLDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDV 328 G A + +LY S + D LT R+ D L+ + E + + + D+ Sbjct: 287 GNQIGIAVNNSRLYEETKSVSLHDPLTGLANRRFLDIQLEKVFELARRHGENQSVIMLDI 346 Query: 329 DKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSI 388 D FK NDT+GH GD++L+++ ILK+Q+ V+R+GG+EF + L Sbjct: 347 DHFKIYNDTYGHQGGDQLLVRLAGILKAQMR-KSDFVFRYGGEEFLALLPDTDLPMACDA 405 Query: 389 LKEIVHFQVGSINLSTSIGVAHSNEC-PTVERLKMLADERLYKSKKNGRAQIS 440 + + ++ S+GVA + P E L AD LY++K+ GR ++ Sbjct: 406 AERVRAAVEREAGVTISLGVAAYRDGMPDKEALVRAADAALYRAKERGRNRVE 458 >UniRef50_B6BII0 GGDEF domain/pas/pac sensor domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BII0_9PROT Length = 662 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 16/210 (7%) Query: 248 LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNS----AFLDDLTKA 303 +++ R+ E+E I + ++ D+ + M N A +D LT Sbjct: 454 VFINRKKDKNIFYEEETITPIFDSKKNIQNFVATSQDITERIEMENKLQKLATIDSLTGI 513 Query: 304 MGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQ 357 R +E+++ ++ L +FD+D FK++NDT+GH GD++L + ++ Sbjct: 514 YNRHKTNEEIEIQLAKAKRYDEEFALVMFDIDHFKDVNDTYGHDAGDDILKEFSDVVLKH 573 Query: 358 IPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQ-----VGSINLSTSIGVAHSN 412 I + + R+GG+EF ++ +E + + +I F ++ S+G + Sbjct: 574 IR-ESDRFGRWGGEEFMLLLPKVDKDEAIRVADKIREFVSRYPFNKLSRITVSVGASIYR 632 Query: 413 ECPTVERLKMLADERLYKSKKNGRAQISWQ 442 E T E L DE LY++K +GR ++ ++ Sbjct: 633 ENDTKESLLKRTDEALYQAKSSGRNRVIFK 662 >UniRef50_B5W3I1 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Arthrospira maxima CS-328 RepID=B5W3I1_SPIMA Length = 1041 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 22/172 (12%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTFG 339 ++L +YN LD LT R+ FD L+ ++ + + D+D FK NDT+G Sbjct: 861 EELEKVYN---LDSLTGIANRRHFDHILQQEWLQLQREKQPLSIIMCDIDYFKCYNDTYG 917 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------V 393 H+ GD+ L +V +K+ + + V R+GG+EF ++ +E L I ++I + Sbjct: 918 HIAGDKCLQRVANAIKNSLKRPRDLVARYGGEEFVILLPNTPIEGGLEISQQIQEAVFKL 977 Query: 394 HFQVGSI-----NLSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQ 438 + Q G+I ++ S+G+A + + +L AD LY++K NGR Q Sbjct: 978 NMQPGAIPANFQRVTVSMGIASKIPSHKQSPTQLLFDADRALYQAKNNGRNQ 1029 >UniRef50_Q21GB7 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21GB7_SACD2 Length = 303 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 16/166 (9%) Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNINDTFGHLLG 343 + A D LTK + R+ FDE + + L L D+D FK NDT+GH+ G Sbjct: 135 ELMKLANHDGLTKILNRRGFDEVMDRYWRQARRDQSEIGLLLIDIDHFKAYNDTYGHVRG 194 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELL----SILKEIVHFQVGS 399 DE L V ++ + R+GG+EFAV+ +E + IL+ I + Sbjct: 195 DETLSAVAHSIEKALMRPIDIAARYGGEEFAVLLPCTGMEGAMTVGDRILEAIRDEAIPH 254 Query: 400 IN------LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + L+ SIGVA S+ + E L AD LY++K+ GR ++ Sbjct: 255 LTSPVKSFLTVSIGVALSSGLASAEDLIKRADAALYQAKERGRNRV 300 >UniRef50_B7KCD2 Diguanylate cyclase with PAS/PAC and GAF sensors n=2 Tax=Cyanothece RepID=B7KCD2_CYAP7 Length = 960 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 20/173 (11%) Query: 289 YSMYNSAFLDDLTKAMGRKSFDEDLKAL------PEKGGYLCLFDVDKFKNINDTFGHLL 342 + N A +D LT+ R+ FD DL+ ++ L L D+D FK NDT+GH Sbjct: 787 QQLENLALIDQLTQIPNRRCFDHDLERHWQNLARQKRPLSLLLCDIDYFKQYNDTYGHSG 846 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI---------- 392 GD L +V + LK+ V R+GG+EF +I +++ + I Sbjct: 847 GDVCLTQVAQALKASARRASDLVARYGGEEFVIILPDTDNFGAIAVAQNIQKTLKELRLP 906 Query: 393 VHFQVGSINLSTSIGVAH---SNECPTVERLKMLADERLYKSKKNGRAQISWQ 442 S ++ SIG+A ++ P++E L AD+ LY++K GR + S Sbjct: 907 HRASGVSSYVTVSIGIATLIPRSDLPSIE-LINAADQALYQAKAQGRDRYSSH 958 >UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XS30_DESMR Length = 498 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 17/162 (10%) Query: 294 SAFLDDLTKAMGRKSFDEDL------KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVL 347 A D LT+ R++FDE L L + D+D FK IND +GHL+GD VL Sbjct: 318 RADHDGLTRIHNRRAFDERLIDELRRHQRYRHAMSLLMVDIDHFKGINDRYGHLVGDHVL 377 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGS 399 +V IL + R+GG+EF VI E+ + + + Sbjct: 378 REVGSILSETLRS-TDFTARYGGEEFVVILPQTAEEQARILAERLRGAIAEARFVHDGED 436 Query: 400 INLSTSIGVAHSNECPTV--ERLKMLADERLYKSKKNGRAQI 439 +++ SIGV+ + L AD+ LY++K GR Q+ Sbjct: 437 FSITVSIGVSALQPGALTRRKDLLEKADKALYQAKHLGRNQV 478 >UniRef50_A6Q5K7 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5K7_NITSB Length = 344 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 77/314 (24%), Positives = 134/314 (42%), Gaps = 25/314 (7%) Query: 143 YLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVS 202 +++ ++H++ L L + F+L++ ++ + L + Y + Sbjct: 34 FIHVLSHSKHLSSFLVFDFFALITLAITLF---LFEKKLEFLPLFLIGNYIILILLVYFV 90 Query: 203 EAMEHFAYLPTGLYVFAYKKDV--YLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIV 260 E Y A + L++ TLI F A++ + + ++ I I+ Sbjct: 91 TKYEFNPYAIVWYPPIAMSAMILARLKIGTLITFITLAAAILLFHTTIPYIQASIYLSII 150 Query: 261 EKEAIINNHFERVLDGGLFFSAADVKKLYS-MYNSAFLDDLTKAMGRKSFDED------L 313 F +++ LF A +++ +Y + D LT+ R+ F E+ L Sbjct: 151 AAAL-----FGWIIEQKLFEFAQKYQQITENLYKLSTTDPLTQLYNRRFFFEECTKKINL 205 Query: 314 KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEF 373 L D+D FK IND +GH GDE+L KIL+ + V R GG+EF Sbjct: 206 AKRKSLPIALLSIDLDHFKQINDQYGHAQGDEILTSFAKILQKSLR-GYDIVARMGGEEF 264 Query: 374 AVIYTGGTLEELL----SILKEIVHFQVG-SINLSTSIGVAHSNECPTV--ERLKMLADE 426 AV L + IL+ + +V S NLS SIG+A S + ++L + AD+ Sbjct: 265 AVCIIDENLNNVRFIANKILENVRKIEVAPSNNLSVSIGIAFSKPHENINLQQLLIQADK 324 Query: 427 RLYKSKKNGRAQIS 440 LY++K+ GR +I Sbjct: 325 ALYRAKERGRDRIE 338 >UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QU32_CHLT3 Length = 606 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 15/206 (7%) Query: 248 LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRK 307 +Y ++ V E + + ++ ++ D LT R+ Sbjct: 400 IYRLKNVELVSANENLEVTTLALKEANAENQLLLERLREQAETLERLVTYDGLTGLANRR 459 Query: 308 SFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVD 361 FDE + ++ + + D+D FK +ND F H +GDEVL KV I + + Sbjct: 460 HFDEQFEYEFRRTRRYKRPLSIAMSDIDFFKKVNDNFSHQVGDEVLKKVASIFRENVRA- 518 Query: 362 KGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVG--------SINLSTSIGVAHSNE 413 V R+GG+EF I+T E + ++I + ++ SIGVA Sbjct: 519 GDLVARYGGEEFVFIFTETNKESAIRAAEKIRKAIEDYDWSNVHAGLKVTISIGVAEDAG 578 Query: 414 CPTVERLKMLADERLYKSKKNGRAQI 439 + L AD +LY++K+NGR Q+ Sbjct: 579 FDGCDELIAAADSKLYEAKRNGRNQV 604 >UniRef50_B6BGM9 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGM9_9PROT Length = 334 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 13/209 (6%) Query: 245 ASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFF-SAADVKKLYSMYNSAFLDDLTKA 303 ++ +++N +EKE I N ++ + L ++ K + A D LT Sbjct: 127 HEFFLVLSKMLNDISIEKENIENIKNIKLSNIKLEEKIQQELSKNIELNALAITDKLTGL 186 Query: 304 MGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQ 357 R D+ L K + D+D+FK INDT+GH +GD+VL ++LK+ Sbjct: 187 YNRVKLDKVLDLEINKMVKLQAEISIIFIDIDRFKPINDTYGHQIGDKVLQSFSQVLKNN 246 Query: 358 IPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS-----INLSTSIGVAHSN 412 I V R+GG+EF +I +E L + + + + L+ S GVA Sbjct: 247 IR-KTDIVGRWGGEEFLIICHEANIEGSLHLAENLRKIIENTSFEYIKELTASFGVASFE 305 Query: 413 ECPTVERLKMLADERLYKSKKNGRAQISW 441 + +++ L AD+ LYK+K NGR ++ + Sbjct: 306 DGDSIDSLVERADKALYKAKHNGRNKVCF 334 >UniRef50_Q1H488 Diguanylate cyclase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H488_METFK Length = 469 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 23/234 (9%) Query: 227 RVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVK 286 ++ T+ + AAL + S L + + + F +L + + + Sbjct: 213 KLVTIFLSIAALSH-LCHVSHLLIDNTPFSANWYMAHLLSLFSFTTLLAVLILQLSQFTR 271 Query: 287 KLYS----MYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNIND 336 L + A D LT R FDE + + L + D+D FK ND Sbjct: 272 DLADSHAYLMEKAHKDSLTGIYNRGYFDETAELEWRRAQRNGTPISLLMLDIDHFKGYND 331 Query: 337 TFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQ 396 FGH+ GD+ L K+ + L + + V RFGG+EF V+ T E ++ +++ H Sbjct: 332 QFGHVKGDKCLKKIAQALHANMQRPGDFVARFGGEEFVVLLPATTAEGCHAMAQKL-HLA 390 Query: 397 VGSINL--------STSIGVAHSN---ECPTVERLKMLADERLYKSKKNGRAQI 439 V + + S SIG A N E ++ L AD LY +K+ GR +I Sbjct: 391 VQKLKISAGDHRRVSVSIGHATWNGPYENGSINELLSQADLALYTAKRLGRNRI 444 >UniRef50_A1AK83 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AK83_PELPD Length = 304 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 17/216 (7%) Query: 239 VAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLD 298 + +++ + ++R IN G+ + N F+ L L A + ++ +A D Sbjct: 88 ILLLTAFEDVDYLKRSINIGVDKYVTKPVNGFQ--LHETLLECAHSLLAEEALQCAARTD 145 Query: 299 DLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 LT R F + + + D+D FK++NDTFGH GD VL V Sbjct: 146 HLTGIANRWEFINRFNTEKGRAERHGTPLSIIIADIDHFKSVNDTFGHNAGDRVLRSVAN 205 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLST 404 + S I V+ R+GG+EF ++ L+ + +++ + ++ SI ++ Sbjct: 206 AISSSIRVE-DACGRWGGEEFMLLLPDTNLDAAARVAEKLRQAVSELSIPWEGESIAVTL 264 Query: 405 SIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 S+GV T++ D LY++K GR ++ Sbjct: 265 SMGVGQFRPGMTLDECIQPVDHALYRAKTGGRNRVE 300 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 17/180 (9%) Query: 277 GLFFSAADVKKLY-SMYNSAFLDDLTKAMGRKSFDE----DLKALPEKGGYLC--LFDVD 329 G+ + K++ + A D LT R+ F E ++ G L + D+D Sbjct: 398 GVMLDITERKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALMLDID 457 Query: 330 KFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSIL 389 FK INDT GH +GD + + + +QI + + R GG+EFA++ T L+ L + Sbjct: 458 HFKRINDTHGHPVGDVAIKALADVC-TQIIRHEDVLGRMGGEEFAIVLTETDLDGALLVA 516 Query: 390 KEI--------VHFQVGSINLSTSIGVAHSNECP-TVERLKMLADERLYKSKKNGRAQIS 440 + + + ++G++ +TSIGVA E T++ + AD LY +K++GR +++ Sbjct: 517 ERLRQAVAAIRIPAELGTVAFTTSIGVAERLEGDATIDTILSRADMALYSAKRSGRNKVA 576 >UniRef50_UPI0001C385F5 signal transduction histidine kinase n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C385F5 Length = 1042 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 22/172 (12%) Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTFG 339 ++L +YN LD LT R+ FD L+ ++ + + D+D FK NDT+G Sbjct: 863 QELEKVYN---LDALTGIPNRRHFDHVLQHEWLQLQREQQPLSIIMCDIDYFKCYNDTYG 919 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------V 393 H+ GD+ L KV LK + + V R+GG+EF ++ E + I ++I + Sbjct: 920 HIAGDKCLEKVADALKKCLKRPRDLVARYGGEEFVILLPNTPTEGAIEISQQIQEAVFEL 979 Query: 394 HFQVGSI-----NLSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQ 438 + + G+I ++ S+G+A + +L AD LY++K NGR Q Sbjct: 980 NMEPGAIPANFQRVTMSMGIASQIPTPQQSPTQLIFTADCALYQAKNNGRNQ 1031 >UniRef50_Q7NT69 Probable Two component sensor n=1 Tax=Chromobacterium violaceum RepID=Q7NT69_CHRVO Length = 558 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 17/178 (9%) Query: 278 LFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDVDKF 331 L + V +++ AF D LT+ R+ FDE E K L + D+D F Sbjct: 357 LSGTMRYVSGQAQLFSLAFTDGLTRLYNRRHFDEAFGHAVEQCRQKRKPLALLILDIDHF 416 Query: 332 KNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK- 390 K ND +GH GDE L KV + LK R GG+EF V+ T G + LS + Sbjct: 417 KKYNDHYGHYAGDEALQKVARALKDCFRQKGQLTARLGGEEFGVLLTPGDTPQALSAAER 476 Query: 391 --------EIVHFQVGSINLSTSIGV--AHSNECPTVERLKMLADERLYKSKKNGRAQ 438 E+ H +S SIGV + L AD+ LY++K+ GR + Sbjct: 477 FLGRLAAMELPHSASPLGKISCSIGVCACIPGPADSTRTLFEQADQALYEAKRGGRNR 534 >UniRef50_D2R798 Diguanylate cyclase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R798_9PLAN Length = 500 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 15/192 (7%) Query: 260 VEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA---- 315 V++ N ++ L A +++ S A D LT+ R++FD++L+ Sbjct: 86 VQRLIDANERMQKQLVSAEERLQAQARQIESHAVEARTDALTQVANRRAFDDELRRCLSE 145 Query: 316 --LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEF 373 + L + DVD FK NDT GH GDEVL V ++L++ + V R+GG+EF Sbjct: 146 RDHNKTVSTLMILDVDHFKKFNDTHGHQAGDEVLRGVARVLRNAFSSAE-LVARYGGEEF 204 Query: 374 AVIYTG-------GTLEELLS-ILKEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLAD 425 A+++ G + E+ + FQ S++++ S G++ + AD Sbjct: 205 AIVFPGVSFAACQISAEKARQAVATANFRFQGKSLSVTASAGLSELLPTDNEQEWIRRAD 264 Query: 426 ERLYKSKKNGRA 437 E LY SKK GR Sbjct: 265 EALYASKKAGRN 276 Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 102/339 (30%), Gaps = 33/339 (9%) Query: 117 DIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENL 176 D + H G + L + L+ G E F+++ ++ + + Sbjct: 161 DHFKKFNDTHGHQAGDEVL--RGVARVLRNAFSSAELVARYGGEEFAIVFPGVSFAACQI 218 Query: 177 MFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFA 236 + + K+ T S + + + ++R ++ + Sbjct: 219 SAEKARQAVATANFRFQGKSLSVTASAGLSEL--------LPTDNEQEWIRRADEALYAS 270 Query: 237 ALVAVISGASCLY--LVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNS 294 G VR IN G + AD +L+ Sbjct: 271 KKAGRNCGHMTNAERTVRLTINDPAAVAAQTAAAEMSVAKVGDEWLFEADTNELF----- 325 Query: 295 AFLDDLTKAMGR-KSFDEDLKALPE-----KGGYLCLFDVDKFKNINDTFGHLLGDEVLM 348 D + R FD+ ++ L + L + VD + G VL Sbjct: 326 -TRDPIANVSSRPVFFDDLIRRLAQWRRGGAPLSLMMVQVDGLMRVATEHGPTAAATVLR 384 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF--------QVGSI 400 +I+++ + D V R G D FA++ G + + S+ + + + G+ Sbjct: 385 VTSQIMQATMR-DMDHVTRLGEDTFALLLPGAKIIDAHSVSERLRAAVQKCRLPRRAGAA 443 Query: 401 NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + ++G + + + A L + GR + Sbjct: 444 WFTITVGAVEVSNGDDMRLILERARRALQAAIAQGRNCV 482 >UniRef50_Q1YG68 GGDEF domain protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YG68_MOBAS Length = 382 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 81/170 (47%), Gaps = 16/170 (9%) Query: 285 VKKLYSMYNSAFLDDLTKAMGRKSFD----EDLKALP--EKGGYLCLFDVDKFKNINDTF 338 +++ S+ AF D LT R+++D E+L E G L + D D FK +NDT+ Sbjct: 190 MRREQSLEVDAFTDALTGLANRRAYDALIAEELAQRRGAEIGVTLLVVDFDHFKQVNDTY 249 Query: 339 GHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH---- 394 GH GDE L V +IL+S + + V R GG+EF VI L + + I H Sbjct: 250 GHEAGDEALKVVSRILRSCVR-EGDYVCRHGGEEFTVILPQTGLPQGRRTAERIRHAIEA 308 Query: 395 ----FQVGSINLSTSIGVA-HSNECPTVERLKMLADERLYKSKKNGRAQI 439 +++L+ SIGVA L AD LY++K GR Q+ Sbjct: 309 APLIAGDQNLSLTVSIGVAGAPQHGDDPNTLYRCADAALYEAKSAGRDQV 358 >UniRef50_A8GJ51 Diguanylate cyclase n=1 Tax=Serratia proteamaculans 568 RepID=A8GJ51_SERP5 Length = 370 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 16/228 (7%) Query: 226 LRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADV 285 + ++ + A+ I S LV + ++ + E+ + + Sbjct: 138 FFLFSIPVLLVAIAENIFINSAFSLVNLISYALMLFLIYSARSRLEQWFQLAIERELENK 197 Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDL------KALPEKGGYLCLFDVDKFKNINDTFG 339 + + + A D LT R+ FD ++ + L L DVD FK ND +G Sbjct: 198 QLIERLSKLANRDPLTGIANRRYFDNYFDAVLLRESTLQAPFSLILLDVDFFKKYNDHYG 257 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVG- 398 H GDE L ++ L+S + V R+GG+EF ++ E + + K I G Sbjct: 258 HQQGDECLTRLATCLESATRRSQDLVARYGGEEFIILLPKSDAGEAVQVAKRIEGLLAGL 317 Query: 399 ---------SINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRA 437 + ++ S GVA E+L AD+ LY++K+ GR Sbjct: 318 AMPHAASEVAQWVTVSQGVAQWQPGQNREQLLAAADQALYRAKELGRN 365 >UniRef50_A3WLL9 Signaling protein with a acyltransferase and GGDEF domains n=2 Tax=Idiomarina RepID=A3WLL9_9GAMM Length = 594 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 110/263 (41%), Gaps = 22/263 (8%) Query: 197 AIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVIN 256 +FT++ + + L ++++ I + + ++ + L + Sbjct: 327 RMFTIAWGALLLSVMVNSLGYLGIIDSMFIQ--RHAIMLGSGLEILLLSWVLAVRYNEQR 384 Query: 257 RGIVEKEAIINNHFERVLDGGLFFSAADVKKLYS----MYNSAFLDDLTKAMGRKSFDED 312 R + + N E ++ F +++L + D LT R+ F + Sbjct: 385 RERLIAQQRYNEELETRVEERTFELEITLRELQEANNELEQRNLEDPLTGLHNRRYFTQQ 444 Query: 313 LKA------LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY 366 ++ ++ L + D+DKFK +NDT+GH +GD++L V L+ Q V Sbjct: 445 IEREYRRSRRNQRPMCLLMIDIDKFKAVNDTYGHGVGDDILQAVSTELRKQARRPTDAVC 504 Query: 367 RFGGDEFAVIYTGGTLEELLSILKEIVHF--------QVGSINLSTSIGVAHSNEC--PT 416 R+GG+EFA I L+ L + +V + G +++ S GVA + + Sbjct: 505 RYGGEEFAFILAETDLQNGLVFAERLVKHIRQCVFSTRDGEHSITISAGVAAIDNTRDHS 564 Query: 417 VERLKMLADERLYKSKKNGRAQI 439 V L AD LYK+K+ GR Q+ Sbjct: 565 VHDLFTAADSALYKAKREGRDQV 587 >UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Y1_DECAR Length = 413 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 55/224 (24%), Positives = 87/224 (38%), Gaps = 19/224 (8%) Query: 231 LIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYS 290 + + + + + + V E+I VL A+ + Sbjct: 161 AFLLIRPWLFSLGKSGLFDAAQAIAVSQFVMVESIA----AIVLMAFGIVMLANEQVTLE 216 Query: 291 MYNSAFLDDLTKAMGRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGD 344 + A D LT R+SF L + L D+D FK INDT+GH GD Sbjct: 217 LRAIAERDPLTGVFNRRSFLTLLDKSISHSDRMASPLSIMLIDLDHFKKINDTWGHKSGD 276 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQ 396 E L V + I + + R GG+EFA++ + + ++ + + V + Sbjct: 277 EALRHFVAVAVPCIR-NGDIIGRVGGEEFAILLPDTDISKAATVAERLRCEVAARPVKNE 335 Query: 397 VGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 GSI L+ SIGV H + E AD +Y +K GR Q+ Sbjct: 336 HGSITLTVSIGVTHYRKDEAPEVTLHRADNAMYTAKDKGRNQVE 379 >UniRef50_Q5LPK8 GGDEF domain protein n=1 Tax=Ruegeria pomeroyi RepID=Q5LPK8_SILPO Length = 249 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 10/165 (6%) Query: 284 DVKKL-YSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLL 342 ++ KL + + +D +T+ R E L+ PE+ G + + D+D FK INDT+GH + Sbjct: 64 EIDKLNQQLAHLNRIDQMTQLYNRACLLEKLEQEPEEAGMILIADIDHFKQINDTYGHDV 123 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH-------- 394 GD V+++V ++L+ + +G RFGG+EF + LE + I Sbjct: 124 GDLVIIEVARVLQRS-SLPEGIAARFGGEEFVIYVPRLDLEAAEFRAEAIRQAVEAQSVM 182 Query: 395 FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ + SIG+ V + ADE LY++K GR Q+ Sbjct: 183 IDGRKLSCTISIGIEIRQMQENVGDVLKRADEALYRAKAQGRNQV 227 >UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepID=Q21NS3_SACD2 Length = 319 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 20/197 (10%) Query: 256 NRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA 315 RG VE +I V L AA+++ ++ + D LT + RK+++ D + Sbjct: 121 TRGKVEHICLIVYDVTEVAVNRLQIQAANLQ----LHEISRTDGLTGLLNRKTWELDAEQ 176 Query: 316 ------LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFG 369 E L +FD+D FKNIND++GH GDEV+ + +KS I D R+G Sbjct: 177 EYKRFKRHEHPCSLVMFDIDHFKNINDSYGHPAGDEVIRQTAAAVKSCIR-DIDIAGRYG 235 Query: 370 GDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIGVAHSNECPTVER-L 420 G+EF ++ + E L + + I VH++ +I + S+GVA + T Sbjct: 236 GEEFTIVLSDTDTEGALVVAERIRNQIQELTVHYEDFAIQFTVSLGVAQLTQQMTNRTAW 295 Query: 421 KMLADERLYKSKKNGRA 437 AD+ LY++KKNGR Sbjct: 296 IDCADKALYQAKKNGRN 312 >UniRef50_Q60BH3 GGDEF domain protein n=1 Tax=Methylococcus capsulatus RepID=Q60BH3_METCA Length = 385 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 19/282 (6%) Query: 177 MFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFA 236 +F+ N + + ++ +V A F L RV + Sbjct: 103 VFAAVANAYTLHAGHDGLRISVNSVLAAAVFFMIAHALLRPDPPSGRSIYRVTGFLALAI 162 Query: 237 ALVAVISGASCLYL---VRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYN 293 ++V I S L L + ++ V++ VL F + ++ Sbjct: 163 SMVLAIRAVSPLILDSPIVHPMDENWVQQLTYSAILVGNVLGSLCFGLIVAEELNAELHQ 222 Query: 294 SAFLDDLTKAMGRKSF-----DEDLKALPEK-GGYLCLFDVDKFKNINDTFGHLLGDEVL 347 A D LT+ R+ F DE L+A ++ L + D+D FK +ND GH GD L Sbjct: 223 LASFDSLTRIYNRRVFENLATDELLRARTKRVPVSLLMIDIDHFKQVNDRHGHAAGDAAL 282 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGS 399 ++V + ++ + + + R+GG+EF V+ + L I + + + + Sbjct: 283 VRVAETMEESLR-HRDLLCRYGGEEFGVLLPATARAQALRIAERLRLATMHAGFLYGGEA 341 Query: 400 INLSTSIGVAHSNECP-TVERLKMLADERLYKSKKNGRAQIS 440 I L+ SIGVA P + LK AD LY +K+ GR +++ Sbjct: 342 IPLTVSIGVACIEGPPYDLSLLKHDADRALYVAKQAGRNRVA 383 >UniRef50_A4SQK1 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SQK1_AERS4 Length = 539 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 15/174 (8%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKN 333 +A K+L + FLD LT+ R + DE L+ ++ L + D+D FKN Sbjct: 364 ETAEYKKRLTIQKHKLFLDSLTQVHNRAALDERLELEYKRWLRYNTPLCLAIIDIDHFKN 423 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT-------LEELL 386 IND +GH+ GD+ L V K L+ + D + RFGG+EF V+ LE L Sbjct: 424 INDNYGHMAGDKALKVVAKALQGALR-DTDFIARFGGEEFVVLLPNINPDKYQKPLETLR 482 Query: 387 SILKEI-VHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 +K I F+ + ++ SIG E AD+ LY SK +GR Q+ Sbjct: 483 QTIKSIPFRFRDARVEITISIGATLFREGDHTTDAFERADKALYSSKHSGRDQV 536 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 18/251 (7%) Query: 201 VSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIV 260 ++ ++ Y L F V L +I ++AV++ + + + Sbjct: 97 IANTAIYWIYTYPLLSFFLKGNRVGLFWNITLIVVIVILAVLNKLNIVPIPYSPDEIRQA 156 Query: 261 EKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKG 320 ++ V + L S +KKL A D LT A R + L+ E+ Sbjct: 157 LSAYVVIMVLAYVFESALLSSYEKIKKL------ATTDPLTGAFNRYQLFKKLEEEIERS 210 Query: 321 G------YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFA 374 L +FD+D FK+INDT+GH +GD+VL + +K+ I + RFGG+EF Sbjct: 211 KRYGNHLSLIMFDIDNFKSINDTYGHNIGDQVLKITIDTIKNHIR-KTDTLGRFGGEEFM 269 Query: 375 VIYTGGTLEELLSILKEIVH----FQVGSIN-LSTSIGVAHSNECPTVERLKMLADERLY 429 +I G E +I ++I +V I ++ S+GVA ++ AD LY Sbjct: 270 IICPGINDEGARNIAEKIRKLVKDIKVEGIPEITISVGVAEYFPDESITDFIKKADIALY 329 Query: 430 KSKKNGRAQIS 440 +KK G+ ++ Sbjct: 330 SAKKKGKNRVE 340 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75801 Uncharacterized membrane protein yliF n=57 Tax=E... 486 e-136 UniRef50_B7LP32 Putative enzyme with GGDEF domain n=1 Tax=Escher... 414 e-114 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 344 4e-93 UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms ... 262 2e-68 UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 258 3e-67 UniRef50_Q2KVB5 Putative signaling protein n=1 Tax=Bordetella av... 249 1e-64 UniRef50_D1SRS2 Diguanylate cyclase n=1 Tax=Acidovorax avenae su... 249 1e-64 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 245 2e-63 UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthono... 244 4e-63 UniRef50_Q2T680 GGDEF domain protein n=32 Tax=Burkholderia RepID... 244 6e-63 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 243 8e-63 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 243 8e-63 UniRef50_B6JAZ4 Diguanylate cyclase n=1 Tax=Oligotropha carboxid... 242 2e-62 UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 241 3e-62 UniRef50_A1U2H0 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 241 3e-62 UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing pr... 241 6e-62 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 241 6e-62 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 239 2e-61 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 238 3e-61 UniRef50_B2J0M5 Diguanylate cyclase with PAS/PAC and GAF sensors... 238 3e-61 UniRef50_B9ZP06 Diguanylate cyclase with PAS/PAC and GAF sensors... 238 4e-61 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 237 6e-61 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 237 7e-61 UniRef50_C0QFG9 Signal transduction family protein (GGDEF domain... 237 9e-61 UniRef50_A4BI17 Putative uncharacterized protein n=1 Tax=Reineke... 236 1e-60 UniRef50_Q1IV91 Diguanylate cyclase n=1 Tax=Candidatus Koribacte... 235 2e-60 UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 235 3e-60 UniRef50_Q1K430 Diguanylate cyclase n=2 Tax=Desulfuromonas aceto... 235 3e-60 UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein... 234 4e-60 UniRef50_D1TF13 Response regulator receiver protein n=1 Tax=Burk... 234 4e-60 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 234 4e-60 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 234 6e-60 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 234 6e-60 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 233 8e-60 UniRef50_D1TJS9 Response regulator receiver protein n=1 Tax=Burk... 233 9e-60 UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 233 1e-59 UniRef50_Q2SNU2 Response regulator containing a CheY-like receiv... 233 1e-59 UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliil... 233 1e-59 UniRef50_Q4KKJ4 Diguanylate cyclase, putative n=5 Tax=Pseudomona... 232 2e-59 UniRef50_Q31GI5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 232 2e-59 UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece ... 232 2e-59 UniRef50_B4S175 Signaling protein with a acyltransferase and GGD... 232 2e-59 UniRef50_Q2BQL8 Probable two-component response regulator n=1 Ta... 232 2e-59 UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=... 231 3e-59 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 231 4e-59 UniRef50_C7HYK2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 231 5e-59 UniRef50_A4CE22 Response regulator containing a CheY-like receiv... 231 5e-59 UniRef50_A6CMH3 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bacil... 231 5e-59 UniRef50_A0YZR1 Putative diguanylate cyclase (GGDEF domain) n=2 ... 231 5e-59 UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax... 230 6e-59 UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanoph... 230 6e-59 UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliob... 230 6e-59 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 230 7e-59 UniRef50_D0J6P1 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 230 7e-59 UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n... 230 7e-59 UniRef50_A4CF43 Putative uncharacterized protein n=1 Tax=Pseudoa... 230 7e-59 UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 230 8e-59 UniRef50_B0CDD6 Diguanylate cyclase (GGDEF domain) n=2 Tax=Bacte... 230 8e-59 UniRef50_A4G5V3 Putative uncharacterized protein n=1 Tax=Hermini... 230 1e-58 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 229 1e-58 UniRef50_A4VQF4 GGDEF domain protein n=3 Tax=Proteobacteria RepI... 229 1e-58 UniRef50_B5VVN4 Response regulator receiver modulated diguanylat... 229 1e-58 UniRef50_B1HWA5 Putative diguanylate cyclase (GGDEF domain) n=2 ... 229 1e-58 UniRef50_A8UV88 Putative uncharacterized protein n=1 Tax=Hydroge... 229 1e-58 UniRef50_A1S9W6 Putative diguanylate cyclase (GGDEF domain prote... 229 1e-58 UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnet... 229 1e-58 UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobact... 229 1e-58 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 229 2e-58 UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms R... 229 2e-58 UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 229 2e-58 UniRef50_A6W0K6 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL... 229 2e-58 UniRef50_B8E8E4 Diguanylate cyclase n=3 Tax=Shewanella baltica R... 229 2e-58 UniRef50_B7KF34 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7... 229 2e-58 UniRef50_Q60BH3 GGDEF domain protein n=1 Tax=Methylococcus capsu... 229 2e-58 UniRef50_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobac... 228 3e-58 UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 228 3e-58 UniRef50_Q2SK89 Response regulator containing a CheY-like receiv... 228 3e-58 UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoe... 228 3e-58 UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with... 228 3e-58 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 228 3e-58 UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 228 3e-58 UniRef50_Q4ZZT3 GGDEF n=5 Tax=Pseudomonas syringae group RepID=Q... 228 4e-58 UniRef50_A3WLL9 Signaling protein with a acyltransferase and GGD... 228 4e-58 UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteoba... 228 4e-58 UniRef50_D1U8T8 Response regulator receiver modulated diguanylat... 227 5e-58 UniRef50_A0LIF2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 227 5e-58 UniRef50_D2R258 Diguanylate cyclase and metal dependent phosphoh... 227 5e-58 UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus L... 227 5e-58 UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=N... 227 6e-58 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 227 7e-58 UniRef50_Q1MZ89 Response regulator containing a CheY-like receiv... 227 7e-58 UniRef50_Q47C21 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 227 7e-58 UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 227 7e-58 UniRef50_A0Y806 Predicted signal transduction protein containing... 227 7e-58 UniRef50_UPI0001AF5018 diguanylate cyclase, putative n=1 Tax=Pse... 227 8e-58 UniRef50_Q47X90 GGDEF domain protein n=1 Tax=Colwellia psychrery... 227 8e-58 UniRef50_B1XII1 PleD protein n=3 Tax=Bacteria RepID=B1XII1_SYNP2 227 8e-58 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 227 8e-58 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 227 9e-58 UniRef50_Q04S93 GGDEF domain receiver component of a two-compone... 227 9e-58 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 227 9e-58 UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3... 227 9e-58 UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 226 1e-57 UniRef50_A8UWP4 Response regulator containing a CheY-like receiv... 226 1e-57 UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (... 226 1e-57 UniRef50_Q2W9B2 GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W9... 226 1e-57 UniRef50_Q2L341 Putative signaling protein n=3 Tax=Bordetella Re... 226 1e-57 UniRef50_C6NZP2 Periplasmic/7TM domain sensor diguanylate cyclas... 226 1e-57 UniRef50_A8ZVJ7 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 226 1e-57 UniRef50_B9Z7N2 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 226 1e-57 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 226 1e-57 UniRef50_C6D4J1 Diguanylate cyclase with GAF sensor n=2 Tax=Paen... 226 1e-57 UniRef50_UPI0001AEBFD1 Signaling protein with a acyltransferase ... 226 1e-57 UniRef50_Q2BQN9 Diguanylate cyclase, putative n=1 Tax=Neptuniiba... 226 1e-57 UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alterom... 226 1e-57 UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix oren... 226 1e-57 UniRef50_A8HV12 Putative uncharacterized protein n=1 Tax=Azorhiz... 226 1e-57 UniRef50_C1XPT0 Diguanylate cyclase (GGDEF) domain-containing pr... 226 1e-57 UniRef50_Q1H488 Diguanylate cyclase n=1 Tax=Methylobacillus flag... 226 1e-57 UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thioox... 226 1e-57 UniRef50_UPI0001C3940A response regulator receiver modulated dig... 226 1e-57 UniRef50_B7KCD2 Diguanylate cyclase with PAS/PAC and GAF sensors... 226 1e-57 UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nit... 226 1e-57 UniRef50_A8GJ51 Diguanylate cyclase n=1 Tax=Serratia proteamacul... 226 1e-57 UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 226 1e-57 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 226 2e-57 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 226 2e-57 UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8F... 225 2e-57 UniRef50_C1XHK3 Diguanylate cyclase (GGDEF) domain-containing pr... 225 2e-57 UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter sal... 225 2e-57 UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax... 225 2e-57 UniRef50_A8UY33 Putative uncharacterized protein n=1 Tax=Hydroge... 225 2e-57 UniRef50_A1HS81 Response regulator receiver modulated diguanylat... 225 2e-57 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 225 2e-57 UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 225 2e-57 UniRef50_B0TH60 Ggdef domain protein, putative n=1 Tax=Heliobact... 225 2e-57 UniRef50_B7KGV0 Response regulator receiver modulated diguanylat... 225 2e-57 UniRef50_B5W3I1 Diguanylate cyclase with PAS/PAC and GAF sensors... 225 3e-57 UniRef50_A3WKY3 Putative uncharacterized protein n=1 Tax=Idiomar... 225 3e-57 UniRef50_Q2SPL3 Response regulator containing a CheY-like receiv... 225 3e-57 UniRef50_A4W9V5 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638... 225 3e-57 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 225 3e-57 UniRef50_A3IMR3 GGDEF family protein n=1 Tax=Cyanothece sp. CCY0... 225 3e-57 UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing pr... 225 3e-57 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 225 3e-57 UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 225 3e-57 UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID... 225 3e-57 UniRef50_B6BGM9 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 225 4e-57 UniRef50_A9FZW1 FHA domain protein n=1 Tax=Sorangium cellulosum ... 224 4e-57 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 224 4e-57 UniRef50_C6RRW8 Diguanylate cyclase n=6 Tax=Acinetobacter radior... 224 4e-57 UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus... 224 4e-57 UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=... 224 4e-57 UniRef50_B8J4U6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 224 4e-57 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 224 5e-57 UniRef50_C6CT46 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 224 5e-57 UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7Q... 224 5e-57 UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfo... 224 5e-57 UniRef50_Q1N3P2 Probable two-component response regulator n=1 Ta... 224 5e-57 UniRef50_B8GTD8 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 224 5e-57 UniRef50_Q2IXE2 Response regulator receiver modulated diguanylat... 224 6e-57 UniRef50_Q1NKN5 GGDEF:Response regulator receiver n=1 Tax=delta ... 224 6e-57 UniRef50_Q3A5K1 Two component signal transduction response regul... 224 6e-57 UniRef50_Q0AG42 Diguanylate cyclase n=2 Tax=Nitrosomonas RepID=Q... 224 6e-57 UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clos... 224 6e-57 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 224 6e-57 UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7... 224 6e-57 UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 224 7e-57 UniRef50_A1SY47 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 224 7e-57 UniRef50_A6LYL1 Diguanylate cyclase n=1 Tax=Clostridium beijerin... 224 8e-57 UniRef50_B8G8L1 Diguanylate cyclase n=1 Tax=Chloroflexus aggrega... 224 8e-57 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 224 8e-57 UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammap... 223 8e-57 UniRef50_D1B3P8 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 223 8e-57 UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesi... 223 9e-57 UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors... 223 9e-57 UniRef50_C6BU46 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 223 1e-56 UniRef50_Q1MYJ5 Response regulator containing a CheY-like receiv... 223 1e-56 UniRef50_A6VEW2 Ggdef domain protein n=8 Tax=Pseudomonas RepID=A... 223 1e-56 UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4... 223 1e-56 UniRef50_Q21VE2 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 223 1e-56 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 223 1e-56 UniRef50_UPI0001C385F5 signal transduction histidine kinase n=1 ... 223 1e-56 UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 223 1e-56 UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 223 1e-56 UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 223 1e-56 UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 223 1e-56 UniRef50_Q21GT7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 223 1e-56 UniRef50_Q0ACB8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 223 1e-56 UniRef50_A2SEJ2 Diguanylate cyclase n=1 Tax=Methylibium petrolei... 223 1e-56 UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 223 1e-56 UniRef50_A8TQW5 GGDEF domain n=1 Tax=alpha proteobacterium BAL19... 223 1e-56 UniRef50_C5BK03 Ggdef domain protein n=1 Tax=Teredinibacter turn... 223 1e-56 UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii ... 223 1e-56 UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 T... 223 1e-56 UniRef50_B6BJC3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 222 1e-56 UniRef50_B0TJ24 Periplasmic/7TM domain sensor diguanylate cyclas... 222 1e-56 UniRef50_B3QH74 Diguanylate cyclase n=14 Tax=Bradyrhizobiaceae R... 222 2e-56 UniRef50_A1SVT3 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 222 2e-56 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 222 2e-56 UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvest... 222 2e-56 UniRef50_A1AK83 Response regulator receiver modulated diguanylat... 222 2e-56 UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobac... 222 2e-56 UniRef50_Q21ED1 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 222 2e-56 UniRef50_Q2BMX5 GGDEF family protein n=1 Tax=Neptuniibacter caes... 222 2e-56 Sequences not found previously or not previously below threshold: UniRef50_B2SWP1 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B... 233 8e-60 UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 T... 231 4e-59 UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales Rep... 230 1e-58 UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthono... 229 1e-58 UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curviba... 229 2e-58 UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromob... 228 3e-58 UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobiu... 228 3e-58 UniRef50_Q4KF29 GGDEF domain protein n=2 Tax=Pseudomonas fluores... 228 3e-58 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 227 5e-58 UniRef50_B0C2A7 Diguanylate cyclase (GGDEF domain), putative n=4... 227 7e-58 UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 227 7e-58 UniRef50_B7K319 Response regulator receiver modulated diguanylat... 227 7e-58 UniRef50_C8QXT9 Response regulator receiver modulated diguanylat... 227 7e-58 UniRef50_A0YVI7 Regulatory components of sensory transduction sy... 227 7e-58 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 227 9e-58 UniRef50_Q3A1L9 FOG: GGDEF domain containing protein n=1 Tax=Pel... 226 1e-57 UniRef50_Q47FN5 Response regulator receiver modulated diguanylat... 226 1e-57 UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain prote... 226 1e-57 UniRef50_Q48MB2 GGDEF domain protein n=14 Tax=Pseudomonas RepID=... 226 2e-57 UniRef50_A1TUA2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 226 2e-57 UniRef50_B7K7K5 Diguanylate cyclase n=2 Tax=Cyanobacteria RepID=... 225 2e-57 UniRef50_Q0F307 Sensory transduction system regulatory protein n... 225 2e-57 UniRef50_A1WTZ7 Response regulator receiver modulated diguanylat... 225 2e-57 UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepI... 225 3e-57 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 225 3e-57 UniRef50_B9MBS6 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 225 3e-57 UniRef50_Q1K485 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 224 4e-57 UniRef50_Q21GM6 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 224 4e-57 UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnic... 224 4e-57 UniRef50_B1J820 Diguanylate cyclase n=1 Tax=Pseudomonas putida W... 224 5e-57 UniRef50_B5W1M1 Diguanylate cyclase with PAS/PAC and GAF sensors... 224 5e-57 UniRef50_Q48HP3 GGDEF domain protein n=6 Tax=Pseudomonas syringa... 224 6e-57 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 224 6e-57 UniRef50_B1HU26 Response regulator receiver domain protein (CheY... 224 7e-57 UniRef50_Q47I66 Response regulator receiver modulated diguanylat... 224 7e-57 UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q... 224 7e-57 UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodi... 223 8e-57 UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 223 1e-56 UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptu... 223 1e-56 UniRef50_A0LSI3 Diguanylate cyclase n=1 Tax=Acidothermus cellulo... 222 2e-56 UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgar... 222 2e-56 UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 222 2e-56 UniRef50_B5R8P2 Predicted phage protein n=28 Tax=Enterobacteriac... 222 2e-56 UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica R... 222 2e-56 UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desul... 222 2e-56 >UniRef50_P75801 Uncharacterized membrane protein yliF n=57 Tax=Enterobacteriaceae RepID=YLIF_ECOLI Length = 442 Score = 486 bits (1251), Expect = e-136, Method: Composition-based stats. Identities = 442/442 (100%), Positives = 442/442 (100%) Query: 1 MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVA 60 MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVA Sbjct: 1 MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVA 60 Query: 61 IDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQ 120 IDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQ Sbjct: 61 IDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQ 120 Query: 121 VVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSL 180 VVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSL Sbjct: 121 VVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSL 180 Query: 181 FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA 240 FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA Sbjct: 181 FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA 240 Query: 241 VISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL 300 VISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL Sbjct: 241 VISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL 300 Query: 301 TKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV 360 TKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV Sbjct: 301 TKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV 360 Query: 361 DKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERL 420 DKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERL Sbjct: 361 DKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERL 420 Query: 421 KMLADERLYKSKKNGRAQISWQ 442 KMLADERLYKSKKNGRAQISWQ Sbjct: 421 KMLADERLYKSKKNGRAQISWQ 442 >UniRef50_B7LP32 Putative enzyme with GGDEF domain n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LP32_ESCF3 Length = 503 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 186/436 (42%), Positives = 283/436 (64%), Gaps = 4/436 (0%) Query: 11 VSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVAIDLINTLNPT 70 +S+L F+ ISA+ C +YT+ VK ++ ++K +++D +VAN++EYRR+VA +L++ +N Sbjct: 68 ISVLCFVFISAITCTLYTENVKSKINAVKTAIVDNGLSVANVSEYRRAVATNLLDKINSN 127 Query: 71 EEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQVVKYRHVKNT 130 E L +R +YA+ +P YLYD+GP+ I++D CI + +YC +IM K + Sbjct: 128 PEDFLNHIRQSYAEQPAPGYLYDIGPFFINNDHCINITMKGGDYCKEIMTAFKVNNHHQI 187 Query: 131 GFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLF---KNGKPV 187 G I F GK + YY +PV + SLIF++ ER+ L K ++L SL+ N K + Sbjct: 188 GIIKFSGKGYAYYQHPVGYRMSLIFVVDPERYLSLMKLQTEKRQDLFISLYDINDNEKRI 247 Query: 188 TGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASC 247 GD++ ++IF +S + +Y+P +++ AYKK Y +C ++I +A++ + Sbjct: 248 AGDDFLISDSIFPMSASTRALSYVPDMMFIVAYKKSKYFAICFILIAISAVITWLIYHYH 307 Query: 248 LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRK 307 + L+ +++ RG +EKEAI++N F + +FFS +++ + +Y+ D LT+A R+ Sbjct: 308 VKLLSKILYRGQLEKEAILSNQFHEIRGENIFFSPSEINMIRDIYDFGAYDSLTRASVRR 367 Query: 308 SFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 FD D+ L E G+LCLFDVDKFK IND FGHL GDEVL+K+V ++K Q+P DKG VYR Sbjct: 368 IFDSDINDLSENFGFLCLFDVDKFKVINDKFGHLFGDEVLIKLVGLIKEQLPCDKGDVYR 427 Query: 368 FGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNE-CPTVERLKMLADE 426 FGGDEFA+IY L LL +L IV F++G +N S SIG+A + E +ERLK++ADE Sbjct: 428 FGGDEFAIIYRDNDLNALLHMLSHIVRFRMGGLNCSCSIGIASTEECGNNIERLKVMADE 487 Query: 427 RLYKSKKNGRAQISWQ 442 RLYKSKKNGRAQI+WQ Sbjct: 488 RLYKSKKNGRAQITWQ 503 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 80/437 (18%), Positives = 156/437 (35%), Gaps = 47/437 (10%) Query: 17 IMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVAIDLINTLNPTEEQLLV 76 +M+ A+ Y + ++ +L Q + V + + +I + T++P E Q Sbjct: 260 LMLEALPNPTYLINRERQIIALNQVAKERGAVVGDYCWH----SIHHLKTISPVERQFFE 315 Query: 77 GLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFD 136 P Y +DE + K+ E C ++ D Sbjct: 316 N-----TGKPLPG----TKCYFCRADEALNRKQKEN--CE----------------VNLD 348 Query: 137 GKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKN 196 G + + P+ N L +++ + ++ + + + E F G Sbjct: 349 GLFWNIWWVPIDENTYLHYVIDVTKYKKMEEEIREQKE---FLRLILDSMPAGVMVVDAK 405 Query: 197 AIFTVSEAMEHFAYLPTGLY-VFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVI 255 + +E A + + + A+ + A + Sbjct: 406 TFRIENVNLEAAAMIGASPEEIIGKSCFEIFPESKGLCLITAVGQEMDWAERILHRMDGS 465 Query: 256 NRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA 315 +++ + L K +Y + D LT+A R+ F E L+ Sbjct: 466 QLPVLKIVKRLRTKSGEKLIETFIDLTERKKLEEQLYRLSITDYLTQAYNRRYFTEMLER 525 Query: 316 LPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFG 369 E+ L + D+D FKN+ND FGH GD VL + ++K++I + R+G Sbjct: 526 EIERAKRTKMPFALIMLDIDHFKNVNDRFGHAAGDLVLKTLANLIKNRIR-QTDCLARWG 584 Query: 370 GDEFAVIYTGGTLEELLSILKEIVHF-----QVGSINLSTSIGVAHSNECPTVERLKMLA 424 G+EF ++ +E+ + +E+ G ++ S GV T++ L M A Sbjct: 585 GEEFVILLPNTPVEKAAGLAEELREQLSMLEIPGVGRVTASFGVTGYCPGDTLDTLLMRA 644 Query: 425 DERLYKSKKNGRAQISW 441 D+ LY +K +GR + + Sbjct: 645 DQMLYTAKASGRNCVRF 661 >UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms RepID=A8I8X7_AZOC5 Length = 510 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 62/390 (15%), Positives = 128/390 (32%), Gaps = 77/390 (19%) Query: 84 DSVSPSYLYDVGPYL--ISSDECI----QVKEFEKNY------------CADIMQVVKYR 125 D + LY P+ + + C+ ++ + N+ ++ + Sbjct: 150 DQPATG-LYLSRPFRNRLDQEPCVALSRRLTDSHGNFAGVLAILVPLQSVREMFASLTRH 208 Query: 126 HVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGK 185 I DG V + GL F + F Sbjct: 209 RSDAISLIRLDGTILVRQP-----DLGSFGGFGLNVFGRPN-----------FQRMTTTP 252 Query: 186 PVTGDEYNAKNAI--FTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVIS 243 + + + + + V + + + + ++ ++ Sbjct: 253 QGSFTSTSEIDRVKRYYVFSRVGDLPLIVVVGVGMDAVTAPWQAQWLAGAATSVVLCLLI 312 Query: 244 GASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKA 303 + + L R ++ R +E+E + + D LT Sbjct: 313 LGAAVALRREMLRRFEIEQEFL---------------------------RLSQTDSLTGL 345 Query: 304 MGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQ 357 R+ FDE + ++ + + D+D FK +ND GH GD VL +V I+++ Sbjct: 346 PNRRHFDEFGQREWQRAARQRSSIAVLMVDIDHFKQVNDRIGHPGGDRVLREVSDIIRAS 405 Query: 358 IPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV-----HFQVGSINLSTSIGVAH-- 410 + R+GG+EFA+I + + I + G ++ SIG+A Sbjct: 406 LHRPGDFAGRYGGEEFAIILPETDAPAAAHVAERIRAAIEANTAEGVAPVTVSIGLAAGL 465 Query: 411 SNECPTVERLKMLADERLYKSKKNGRAQIS 440 + T+ + + AD LY++K+ GR ++ Sbjct: 466 AAPKGTLAEMMIAADHALYRAKETGRNRVV 495 >UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW02_9GAMM Length = 595 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 67/349 (19%), Positives = 126/349 (36%), Gaps = 29/349 (8%) Query: 109 EFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKS 168 F + D +++ + H K++ + K ++ + SL L+ + Sbjct: 245 IFSLLFARDFLRIYPHTHPKSSRIV----KIILWAASGLVVA-SLFLPYFYVIRVLIICT 299 Query: 169 LAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRV 228 + L ++ E + S ++ + L F + Sbjct: 300 ILACVMGLFAGFYRQV------EGYGVARFYLYSWSLFMLGAILVALNKFDVLPSNMITE 353 Query: 229 CTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAI-INNHFERVLDGGLFF-SAADVK 286 +++ V+S A + L R + EA+ + +L+ + ++A + Sbjct: 354 YSMLFGTGVGTVVLSAALAVRLNDEKNKRYHAQAEALRVQRESVELLEERVKERTSALRE 413 Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGH 340 + + D LT R+S DE L ++ + D+D+FK NDT GH Sbjct: 414 ANEKLEKLSNTDSLTGLNNRRSLDELLAMEVKRTCRTGAPLSAMMMDIDRFKAFNDTHGH 473 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF----- 395 +GD L V ++ S V R+GG+EF V+ L+ I + I Sbjct: 474 QVGDACLKAVAGVIASTAQRPSDVVGRYGGEEFCVLLPDTPLDGAQIIAERIRAAVENLD 533 Query: 396 ---QVGSINLSTSIGVAHSN--ECPTVERLKMLADERLYKSKKNGRAQI 439 + ++ SIGV+ + + L ADE LY +K GR + Sbjct: 534 FTVSGQRVPVTISIGVSELTYCASDSGKALVEAADEALYSAKSAGRNCV 582 >UniRef50_Q2KVB5 Putative signaling protein n=1 Tax=Bordetella avium 197N RepID=Q2KVB5_BORA1 Length = 429 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 124/352 (35%), Gaps = 26/352 (7%) Query: 105 IQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSL 164 +++ +Y YR + + + + PV + I + + Sbjct: 79 LRLCLKNGDYFQG--STFNYRKDGSPYLVE-------WNISPVRGAQGGIEHFVSVQRDI 129 Query: 165 LSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDV 224 +++LA + L+ + + +FT Y ++ + Sbjct: 130 TARTLAQQRQALLAQALNATHDAVLIADDKGHILFTNQAFQRAIGYSAKEVHQLTPQATN 189 Query: 225 Y--LRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLD---GGLF 279 + + + +E+ + L Sbjct: 190 SGQPHPDFYKNLLSVIHGGKRTRHTFPNQNAKGSNAYIEQVITTLTDESGSVKHYISVLK 249 Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKN 333 + V + + D LT + R+ ++ L + + + D+D FK Sbjct: 250 DISQFVAREKLLSKQVRSDALTGLLNRRGAAAKIQRLHRAAHQSGRFYSVIMADIDHFKK 309 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 IND FGHLLGD VL + +++ + + V R+GG+EF ++ L + +++ + I Sbjct: 310 INDQFGHLLGDTVLKRCANLIRDNVR-EGDAVARWGGEEFLILLPNCPLIKAVALAERIR 368 Query: 394 HFQVG-----SINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + + ++ S+GV S+ T + L AD+ LYK+K GR Q++ Sbjct: 369 NTIATLTDPITGQVTLSLGVGTSSPAETPQSLIQRADKALYKAKAQGRNQVA 420 >UniRef50_D1SRS2 Diguanylate cyclase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SRS2_9BURK Length = 535 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 69/352 (19%), Positives = 118/352 (33%), Gaps = 61/352 (17%) Query: 114 YCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFS-------LLS 166 + ++Q H + DG + V + L++F ++ Sbjct: 201 HVQQVLQGFDVGHKGAIALLRADGTVLTREPFRVEDLGRTLPASQLQQFLQSRSGLAIMP 260 Query: 167 KSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYL 226 + + F +N + + Sbjct: 261 SPIDGVVRLVSFEHARNVPLAVAVALSEDEIF------------------------TEWR 296 Query: 227 RVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVK 286 R + I L+ + G + YL+R V R + + A V+ Sbjct: 297 RATAVQIAGILLLLAVIGPAGAYLIRTVKLRRDADLRLRTTH-------------EALVE 343 Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGH 340 M + A D LT R+++D ++ ++ + +FDVD FK ND GH Sbjct: 344 AHARMEHMAEHDGLTGVHNRRAYDRRIREVMAQCRRYQRPVSVVMFDVDFFKRYNDALGH 403 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK---------E 391 GDE L +V L I + R+GG+EFA++ L + + Sbjct: 404 PEGDECLRRVANALAGSIRRPGDFIARYGGEEFAIVLPETDAPGALQVAQAARSAVIALR 463 Query: 392 IVHFQVGSINLSTSIGVAHS--NECPTVERLKMLADERLYKSKKNGRAQISW 441 + H +++ S GVA S E T E L AD LY++K+ GR +I Sbjct: 464 LPHPGSPFGHVTVSGGVACSPGQEPETPEELLGRADTALYEAKQQGRDRIVV 515 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 63/328 (19%), Positives = 122/328 (37%), Gaps = 24/328 (7%) Query: 138 KTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNA 197 K++ + Y + + LLGL L S + + + + + + G + Sbjct: 227 KSYSRWGYRILQALLAVNLLGLIYGFLGSYQVGIIWISSLAAFATPVAWLIGINVWRRGQ 286 Query: 198 IFTVSEAMEHFAYLPTGLYVFAYK-----KDVYLRVCTLIIFFAALVAVISGASCLYLVR 252 I + L L + K + + + ++ + + + Sbjct: 287 ILGGFYVLAWTPLLLGHLVLAVSKLGWIPRSPFTELAPQAGVAVEVILLSFALAYRINME 346 Query: 253 RVINRGIVEKEAIINNHFERVLDGGLFFSAADVKK-LYSMYNSAFLDDLTKAMGRKSFDE 311 R + E I L+ + ++++ + + D LT R+ FDE Sbjct: 347 RRRRQQAQEHALDIQRQANLTLESRVRERTEELEQANEQLRAISLTDGLTHVANRRRFDE 406 Query: 312 DLKALPEKGG------YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKV 365 L+ + L L D+D FK +ND FGHL+GD+ L+ + IL ++ V Sbjct: 407 KLETEWNRALRHEHELSLILLDIDHFKQVNDRFGHLVGDDCLVALASILSDEVQRSGDLV 466 Query: 366 YRFGGDEFAVIYTGGTLEELLSILKEIVHFQV----------GSINLSTSIGVAHSNEC- 414 R+GG+EFA++ + + + + ++L+ S+GVA Sbjct: 467 ARYGGEEFAILLPTTDVAGAQQVAERMRLSVARTPVNSGEHMSPVSLTISLGVATLTPNR 526 Query: 415 -PTVERLKMLADERLYKSKKNGRAQISW 441 + L ADE LY +K +GR ++ Sbjct: 527 QSDCQELIRRADEALYAAKSDGRNRVVV 554 >UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VK28_9CYAN Length = 331 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 24/208 (11%) Query: 251 VRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFD 310 VRR+++ V E ERVL L + + LD LT+ R++FD Sbjct: 124 VRRLLHTHWVMAELHRKIEQERVLKAKLE------EMNQELQRLVDLDGLTQIANRRAFD 177 Query: 311 EDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGK 364 + L+ ++ L L D+D FK NDT+GH GDE L +V IL+ Sbjct: 178 QALQQEWKRLAREQAPLSLILCDIDFFKAYNDTYGHQAGDECLKQVADILRKAAKRPADV 237 Query: 365 VYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSIN--LSTSIGVA--HSN 412 V R+GG+EF VI +L + + + I + ++ ++ S GVA Sbjct: 238 VARYGGEEFVVILPNTSLRGAMQVAESIRSKLKSRAIVHEGSGVSKFVTLSCGVAGVIPP 297 Query: 413 ECPTVERLKMLADERLYKSKKNGRAQIS 440 T +RL AD+ LYK+K GR ++ Sbjct: 298 PKTTPDRLIAEADQALYKAKVEGRDRVV 325 >UniRef50_Q2T680 GGDEF domain protein n=32 Tax=Burkholderia RepID=Q2T680_BURTA Length = 506 Score = 244 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 73/415 (17%), Positives = 129/415 (31%), Gaps = 86/415 (20%) Query: 64 INTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISS---DECIQVKEF---------- 110 + T + R DS + Y GPY + S + C+ + Sbjct: 135 LPTASFASYDFFAAQR----DSPALGT-YLSGPYRMPSRGGEPCVALSRRVERADGAFAG 189 Query: 111 ------EKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSL 164 Y ++ + DG+ + T + L L SL Sbjct: 190 VVVLAVRVAYLRQLLAAASAGPHGVLALVHADGRIVARMPFDET-----LVGLDLSGTSL 244 Query: 165 LSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDV 224 S+ F + Y + + V + + V A++ V Sbjct: 245 YSRMQ-FGRSGEFFDVEPIDHMKRFYLYRRLDGVPLVVQVAIADDDIYATWRVRAWRFGV 303 Query: 225 YLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAAD 284 V + F + A ++ + Sbjct: 304 VTGV--FALIFVVMSAYLAHSLW-----------------------------------RK 326 Query: 285 VKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALP------EKGGYLCLFDVDKFKNINDTF 338 ++ A D LT R++ DE L+ E+ + D+D FK NDT+ Sbjct: 327 STAEAALARLAGTDSLTGLHNRRALDETLEREWRRAVGGERPLAILFVDIDHFKRYNDTY 386 Query: 339 GHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV----- 393 GH +GDEVL V + + Q V R+GG+EF V+ L + + + Sbjct: 387 GHQVGDEVLATVSRCIAQQAARLGDVVARYGGEEFVVVLPDTPRGGALVVAERVRLGVRM 446 Query: 394 ---HFQVGSIN-LSTSIGVAHSNEC----PTVERLKMLADERLYKSKKNGRAQIS 440 + + ++ S+GVA P + + AD+ LY++K GR ++ Sbjct: 447 LGIEHEGSEVGFVTVSVGVAVWQPDGARAPHIAAIVEAADQALYQAKAAGRNRVV 501 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 113/283 (39%), Gaps = 13/283 (4%) Query: 171 MDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCT 230 ++ +N + + V ++ N + +E Y + + + Sbjct: 490 LNYQNDLVNSIVKNTQVGVLVFDEDNIYYENDYLLELLGYTHEDIKTLSIFDILSPIHVK 549 Query: 231 LIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYS 290 II I L ++ + I + + + F K+L Sbjct: 550 DIIKALTNKTPIILQEFHILNKKNQTLYVKGSLNFIKDVENKPVAVFTFVDITKEKELSD 609 Query: 291 -MYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTFGHLLG 343 + + D LT R+ + L+ ++ L +FD+D FK+IND+FGH +G Sbjct: 610 MLLKQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMFDIDFFKHINDSFGHDVG 669 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQ-----VG 398 D+VL + K++ I + R+GG+EF +I T E+ + +++ Sbjct: 670 DKVLKAIAKVVSENIR-NTDIFARYGGEEFVIIAPETTKEDAKILAEKLRSLIRNLHFEE 728 Query: 399 SINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 IN++ S GVA + T E L ADE LY++KK GR ++ Sbjct: 729 GINVTCSFGVASLEKHDTKETLLKRADEALYEAKKTGRNKVVV 771 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 71/337 (21%), Positives = 133/337 (39%), Gaps = 32/337 (9%) Query: 116 ADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSEN 175 +D+ +V+ ++ DG+ Y + + L+ + L++ + Sbjct: 677 SDLKSMVQVAPPAVISSVTADGERVTYGGHIPADTQRLVVNYAGLGY-LMADHIEYQVRL 735 Query: 176 LMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFF 235 + F N + S + LP YVF + + + F Sbjct: 736 VGFD---------------DNWLARGSMTTSEYTSLPANDYVFQVRAAYPGGAWSDPVSF 780 Query: 236 AALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSA 295 A + +I + ++ + + +K + A Sbjct: 781 -AFTRSEHPWQQSWFWLSIIFALGLAATILVRARIRFLNNQRAQLELMVAEKTKELKGLA 839 Query: 296 FLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMK 349 D LT+ R++FDE L+ ++ L + DVD FK+IND F H++GD+VL++ Sbjct: 840 RQDSLTQLGNRRAFDEQLQYEFKRCERSEQPLSLAIIDVDHFKSINDRFLHVIGDQVLIE 899 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSIN 401 + +L + + D + R+GG+EFA++ T +E L + I + Sbjct: 900 LSALLSNMLR-DIDYIARWGGEEFALLMPETTAKEALQAAERIRQRIEDTSYQHLADELA 958 Query: 402 LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 ++ SIGVA S P L + AD+ LYK+K++GR + Sbjct: 959 VTVSIGVASSEHYPNHSALLVAADKALYKAKQSGRNR 995 >UniRef50_B6JAZ4 Diguanylate cyclase n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAZ4_OLICO Length = 493 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 114/337 (33%), Gaps = 55/337 (16%) Query: 113 NYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMD 172 +Y D+ +K+ DG+ + S L + + + LA Sbjct: 188 SYFRDLFSHLKFGEGDTATVFRNDGRVMMRQPS-----NSDTIGKDLSNSAGVRQILATR 242 Query: 173 SENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLI 232 S + + N+ A+ V Y P VF + L+ Sbjct: 243 SGSATLRSTLDNIERLYVWQNSDRALVVVVGKSLESIYGPWWRQVF--------IIGGLM 294 Query: 233 IFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMY 292 + +A V +L+ R + R + Sbjct: 295 LMLSAFVI-----GAAFLLAREMARRA--------------------------DAEQRLA 323 Query: 293 NSAFLDDLTKAMGRKSFDEDLKALPEK-----GGYLCLFDVDKFKNINDTFGHLLGDEVL 347 A D LT R+ FDE + + L + D D FK ND FGH GD+VL Sbjct: 324 QLATTDALTGIDNRRRFDERMLDEWRRGWQKLPLSLLMIDADHFKTFNDLFGHQEGDQVL 383 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV----HFQVGSINLS 403 +++ K + R+GG+EFA++ L++ + I +EI + Sbjct: 384 VRIAKSIAQSSRRPADCAARYGGEEFALLLPDTELDDAMRIAEEIRTRVERLSTEKWATT 443 Query: 404 TSIGVAHSNECP--TVERLKMLADERLYKSKKNGRAQ 438 SIGVA + L AD+ LY++K+ GR + Sbjct: 444 VSIGVACVVPDMAGSSRNLIEAADKALYQAKEQGRNR 480 >UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTU2_DESBD Length = 339 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 20/210 (9%) Query: 248 LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKK-LYSMYNSAFLDDLTKAMGR 306 ++ + R + R +V + A++ H L+ + ++++ + + + D LT R Sbjct: 124 IWGMARDLTRFLVSQNALV--HLNEQLEAKILQRTRELEEANHRLSELSLTDGLTGIANR 181 Query: 307 KSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV 360 + FD L + L + D+D FK ND +GH GD+ L +V ++L+S Sbjct: 182 RRFDAALAEEWSRSARTGSTLALIMLDIDHFKKYNDHYGHQQGDDCLRRVAEVLRSSARR 241 Query: 361 DKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS---------INLSTSIGVAHS 411 V R+GG+EF +I L I + + ++ S+GVA S Sbjct: 242 QGDLVSRYGGEEFCMILPDTALPGAFEIAERLRREVENMDMPHVLSDVGRVTASMGVAAS 301 Query: 412 NE--CPTVERLKMLADERLYKSKKNGRAQI 439 + L ADE LY++K GR + Sbjct: 302 MPCKAMSPAELLRRADESLYQAKSEGRNCV 331 >UniRef50_A1U2H0 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U2H0_MARAV Length = 630 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 67/331 (20%), Positives = 122/331 (36%), Gaps = 31/331 (9%) Query: 140 FVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSE---NLMFSLFKNGKPVTGDEYNAKN 196 + + + +L LL ++ +L L LM S+ + K Y Sbjct: 287 WTWAMIMTAGMLALAGLLIPYQWLILPSILVAFVGCSTMLMLSVVRWIKKDPAARYYTVA 346 Query: 197 AIFT----VSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVR 252 +F + A+ F LP L V + +++ A + + + Sbjct: 347 WVFMLFGGIVLALSKFTMLPRNLL-TENATQVGSALGVILLSIALADRLNREKKKSFAAQ 405 Query: 253 RVINRG------IVEKEAIINNHFERVLDGGLFFSAADVK-KLYSMYNSAFLDDLTKAMG 305 + + R EK I +L+ + D++ + + D LT Sbjct: 406 QKLLREERKARLAQEKSLRIQQEANALLEERVQERTRDLEILNEQLLELSATDPLTGLKN 465 Query: 306 RKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIP 359 R FD+ ++ E+ L + D+D FK NDT+GHL+GD+ L V +K + Sbjct: 466 RGHFDKKFQSDVVHAYRFEETLSLLIVDIDHFKGFNDTYGHLVGDDCLKMVADCIKQHVT 525 Query: 360 VDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAH- 410 + R+GG+EF V+ + + I ++L+ SIGV Sbjct: 526 RPQDLAARYGGEEFVVLLPDTPEAGACRVAELIREDIQKMAFRVSDQVLHLTVSIGVCSC 585 Query: 411 -SNECPTVERLKMLADERLYKSKKNGRAQIS 440 ++ + L AD LY++K GR ++ Sbjct: 586 APSQADATKALFACADGALYRAKAEGRNRVV 616 >UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XLF8_MEIRU Length = 373 Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 113/301 (37%), Gaps = 14/301 (4%) Query: 155 FLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAM--EHFAYLP 212 +LL ++ + Y + + + + Sbjct: 57 YLLLPMAVGFIALEFHLWRNPQNVRWVWQIALALIAIYEIVSLFYEAAYKLHQRDGITPA 116 Query: 213 TGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFER 272 + Y L + F+ + V+ + + + + + F Sbjct: 117 ALWFPMVYLMAFNLLNRRQALRFSLVYLVLGLLAGAVGMLMSPSINVSSINTALQFTFSN 176 Query: 273 VLDGGLFFSAADVKK-LYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCL 325 + L + A +++ M+ A D LT R++ + L+ + L L Sbjct: 177 IAYLALLYMFAYLRRHYAQMHQMAHTDALTNLTNRRAMQQKLEGELDRARRYNRPFALLL 236 Query: 326 FDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL 385 D+D FK INDT+GH +GD+VL +V L + + + R+GG+EF ++ L++ Sbjct: 237 ADLDHFKQINDTYGHSVGDQVLREVAGRLAQHLR-ESDSLARWGGEEFLILAPETDLQQA 295 Query: 386 LSILKE----IVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 + + I + + ++ S+GVA + ++ L ADE +Y++K GR QI Sbjct: 296 YLLAQRLLGAIRESPISGVQVTLSLGVACYRQGDSIAALLSRADEAMYRAKAGGRNQIVL 355 Query: 442 Q 442 + Sbjct: 356 E 356 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 126/360 (35%), Gaps = 40/360 (11%) Query: 103 ECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERF 162 E ++ E + V YR + + + + PV + + + Sbjct: 107 ERMRQCLSESLFFEG--STVNYRADGSPYVVE-------WKISPVRDDAGAVCNFVSVQQ 157 Query: 163 SLLSKSLAMDSEN------------LMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAY 210 ++ + A ++ +M + + + E+ Sbjct: 158 NISPRIRAEREQHLLAQALNAALDPIMITDCNATIVFANEAFQHITGYSASEIIGENPRV 217 Query: 211 LPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHF 270 L +G + + + + F + S Y + +E Sbjct: 218 LSSGKHDEMFYAQFNEALASGTPFRTTFINKRKDGSLFYAEHSISPLCNLEGTITHYVSI 277 Query: 271 ERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE------KGGYLC 324 + + L + + A D LT R++ + L+ L + K L Sbjct: 278 SQDVTTRLG-------REQKLLEIAHSDPLTGLNNRRAAEHTLERLIDTARISGKPFSLI 330 Query: 325 LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEE 384 + D+D FK++ND +GH GD VL V ILK +I + R+GG+EF ++ +L+ Sbjct: 331 IGDIDHFKSVNDRYGHPAGDRVLTSVAVILKQRIRLQ-DVAARWGGEEFLILVPDSSLDH 389 Query: 385 LLSILKEIVH-----FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + I + +++ S+GVA + T L AD+ LY++K+ GR ++ Sbjct: 390 AAELADRIRKGVEDLLIPNTGSVTISLGVAQLSPGETAASLIQRADKALYQAKRRGRNRV 449 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 70/328 (21%), Positives = 122/328 (37%), Gaps = 32/328 (9%) Query: 142 YYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTV 201 LYPV + L+ + F L + E +N T EY +AI + Sbjct: 364 GSLYPVEIHLELVEFDKEKVFVALVIDITERREMEKELKERNEILSTIMEYAG-DAIIMI 422 Query: 202 SEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVR-----RVIN 256 + + + P + Y K+ + + + + R V+ Sbjct: 423 DDNGKVTFWNPAAERILGYSKEEIIGKDLHMFMIQDMRLYEAYREAFKKFRLTGKGSVVG 482 Query: 257 RGIVEKEAIINNHFERVLDG-------------GLFFSAADVKKLYSM-YNSAFLDDLTK 302 + + K N H V G+ ++ K+ + Y + D LT Sbjct: 483 KTVEMKTRHKNGHEIDVELSLSAVRIKDSWHAIGIIRDISERKRFEELLYRQSITDPLTN 542 Query: 303 AMGRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKS 356 R+ F + L+ E+ L +FD+D FKN+ND FGH GD VL V +K Sbjct: 543 IYNRRFFMQMLEQEIERVKRNKKLFSLIMFDLDHFKNVNDRFGHAAGDMVLKSVADTVKG 602 Query: 357 QIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS-----INLSTSIGVAHS 411 +I R+GG+EF ++ +L + +E+ + ++ S GV Sbjct: 603 RIR-KTDYFARWGGEEFIILLPETSLNNAAELAEELRKKISETELDGIGKVTASFGVTEY 661 Query: 412 NECPTVERLKMLADERLYKSKKNGRAQI 439 TV+ + + D LY++K +GR + Sbjct: 662 RNTDTVDTVLLRVDGALYEAKGSGRNCV 689 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 17/193 (8%) Query: 266 INNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------ 319 + + + S +++ ++ + D LT R+ +E + Sbjct: 354 LARPLAQRFAERVALSLVNLRLRATLRQQSIRDPLTGLYNRRYLEETFTRELARVQRRRQ 413 Query: 320 GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTG 379 L + DVD FK NDT+GH LGD +L ++ L+ + V R+GG+EF V+ Sbjct: 414 PLSLLMIDVDHFKQHNDTYGHALGDTLLRRLATHLQRFFRTE-DIVCRYGGEEFVVLLPE 472 Query: 380 GTLEELLSILKEIVHF---------QVGSINLSTSIGVAHS-NECPTVERLKMLADERLY 429 + + + + + L+ SIG A + T E L AD LY Sbjct: 473 CDAPQAQARAEALRRSVENLAVTSNDAEFVALTISIGGASWPDHATTPEDLLARADAALY 532 Query: 430 KSKKNGRAQISWQ 442 ++K GR ++ ++ Sbjct: 533 RAKHRGRNRVEFE 545 >UniRef50_B2J0M5 Diguanylate cyclase with PAS/PAC and GAF sensors n=2 Tax=Nostocaceae RepID=B2J0M5_NOSP7 Length = 888 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 112/294 (38%), Gaps = 35/294 (11%) Query: 164 LLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKD 223 L ++L S FS + G P + V E ++ + + + Sbjct: 603 RLEQTLHPFSRTRDFSYYYQGLPTVLHNIQESDLSADVFELLQLYQIKAAMVVPILNGEH 662 Query: 224 VYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAA 283 ++ L+A A + V + + I H + Sbjct: 663 LW----------GLLIAHQCSAPRYWQAFEVNLLQQLASQVAIAIHQSVLYQQVQA---- 708 Query: 284 DVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDT 337 + A LD LT+ R+ FD+ L+ + L LFDVD FK NDT Sbjct: 709 ---ANEELQRLATLDGLTQIANRRRFDQYLENEWHRLKREQMPLSLILFDVDFFKRYNDT 765 Query: 338 FGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQV 397 +GHL GD+ L ++ LKS I V R+GG+EFAVI +E +S+ + I Sbjct: 766 YGHLAGDDCLRQLGSALKSVIKRPADLVARYGGEEFAVILPNTEIEGAISVAQTIRQAVY 825 Query: 398 GSI----------NLSTSIGVAHSNEC--PTVERLKMLADERLYKSKKNGRAQI 439 I ++ S+GVA + + L AD+ LY +K+ GR ++ Sbjct: 826 DLIIPHAQSSVCDRVTVSLGVASIVPNCETSPQDLINAADKSLYIAKQQGRDRV 879 >UniRef50_B9ZP06 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZP06_9GAMM Length = 483 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 62/311 (19%), Positives = 116/311 (37%), Gaps = 26/311 (8%) Query: 147 VTHNRSLIFLLGLE--RFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEA 204 R+ +F L + SL+++ A + +++ + ++ Sbjct: 173 FGLGRAYVFRFDLPAGQMSLVNEWCARGVQA-----YRDHLQAIPLHEHNWVTSQILARK 227 Query: 205 MEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEA 264 + H + A +++ + R + LV+ + L + + Sbjct: 228 VVHVPDVHELPAEAAVEQEEFRREQIRSLLLIPLVSDQNAFGMLGFDAVEAPHRWTDDQI 287 Query: 265 IINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL----PEKG 320 R++ + + A + + A +D LT R+ FD L+ E+ Sbjct: 288 TA----LRLVADMIAGTLARKQVEQELARQARVDGLTGLANRREFDHQLERECAARRERS 343 Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 L + D+D FK ND FGH GD+ L V +++S + R+GG+EFA + Sbjct: 344 LSLLMIDIDHFKPYNDAFGHQAGDDCLRAVADVIRSILNRPADVGARYGGEEFACVLADT 403 Query: 381 TLEELLSILKEIVHF---------QVGSINLSTSIGVAHSNECPTVE--RLKMLADERLY 429 E L + + I ++ SIGV + VE L ADE LY Sbjct: 404 NPEGGLRVAERIREAVYGLDLKQPDTDEGRVTISIGVCSVHTRWPVEPRALLRQADEALY 463 Query: 430 KSKKNGRAQIS 440 ++K+ GR ++ Sbjct: 464 RAKRAGRNRVE 474 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 74/376 (19%), Positives = 128/376 (34%), Gaps = 39/376 (10%) Query: 97 YLISSDECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFL 156 Y + D+ + + K I+ YR DG+ VY L ++ Sbjct: 92 YKQNIDKLVILNLNGKPVL--ILSKGNYRKFNPDYI---DGQQLVYALKYKNKFLGNLYF 146 Query: 157 LGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLY 216 +++ + + +F L K K+ I + ++ + Sbjct: 147 SIPF-WAIQKDLNYVFKDTYLFLLKKEVGLSRLKAGAIKSIIPSGLSDRYYYEDIQIKDI 205 Query: 217 VFAYKKDVYLRVCT--------------------LIIFFAALVAVISGASCLYLVRRVIN 256 Y + LI F L + Sbjct: 206 PITYINKKIRKKVLKFLGKDKPFSFIYNNEGNFYLITFIPVFNLNNHLMGYLVRYSKDNT 265 Query: 257 RGIVEKEAIINNHFERVLDGGL-FFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA 315 I+ K N +L L F +K L + D LT + F+E L+ Sbjct: 266 YPIILKSFYTNITLSFLLAVILGFSVYIFLKDLEKFRYLSETDRLTGLYNKGKFNEVLQR 325 Query: 316 L------PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFG 369 ++ L +FD+D FK INDT+GH +GDEVL + K++K I R+G Sbjct: 326 EIQRAKRYKRPLSLIIFDIDHFKKINDTYGHKVGDEVLKALAKLIKKNIR-KTDFAARWG 384 Query: 370 GDEFAVIYTGGTLEELLSILKEIVHFQV-----GSINLSTSIGVAHSNECPTVERLKMLA 424 G+EF ++ +E + +++ ++ S+GVA E + A Sbjct: 385 GEEFVILAPETNVEGAKKLAEKLRQAVETYKFPTVGKVTISLGVAQLEPDEKPEDFIVRA 444 Query: 425 DERLYKSKKNGRAQIS 440 D LYK+K+ GR ++ Sbjct: 445 DMALYKAKEGGRNRVE 460 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 15/191 (7%) Query: 264 AIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK---- 319 A + V G + + + + A D LT R+ F E L+ ++ Sbjct: 519 AELPEESGIVYCGIITDTTEHREAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRY 578 Query: 320 --GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIY 377 L DVD+FK +NDT+GH +GDEVL + I ++++ D V R GG+EFAV+ Sbjct: 579 GTPLALISIDVDRFKRVNDTWGHAVGDEVLRALAGICRAEVR-DVDTVGRIGGEEFAVLL 637 Query: 378 TGGTLEELLSILKEIVH--------FQVGSINLSTSIGVAHSNECPTVERLKMLADERLY 429 EE +++ + + G + ++ S+GV+ S C + L AD LY Sbjct: 638 PDTAPEEAMAVAERLRAGVEAAPLLTTAGPLTVTLSLGVSASPPCDGADTLLREADRALY 697 Query: 430 KSKKNGRAQIS 440 ++K GR ++ Sbjct: 698 RAKAGGRNRVE 708 >UniRef50_C0QFG9 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFG9_DESAH Length = 339 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 17/224 (7%) Query: 235 FAALVAVISGASCLYLVRRVINRGIVEKEAIINN--HFERVLDGGLFFSAADVKKLYSMY 292 ALV + + + R +++ I E +A++ F+ + A+ KKL Sbjct: 114 LQALVRELEEDEDMDSLARTMDKIIQEAKALVQTGKSFQGRMASSSQELASLRKKLDVSK 173 Query: 293 NSAFLDDLTKAMGRKSFDEDLKALPEKG---GYLCLFDVDKFKNINDTFGHLLGDEVLMK 349 A D LT + R+ F+ L L + L + D+D FK +NDT+GHL+GD +L Sbjct: 174 KDAETDALTGLLNRRGFESRLHPLLKDPQSCFCLIMIDIDHFKRVNDTYGHLVGDSILKA 233 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI-----------VHFQVG 398 + +LK Q + RFGG+EF ++ LE+ ++ ++I Sbjct: 234 LANLLKQQTKGK-DCLARFGGEEFIILLPETRLEQAGAVAEDIRKKLAAQEWKQRKTGKP 292 Query: 399 SINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISWQ 442 ++ S+GV + L D LY +K+NGR ++ + Sbjct: 293 MGKITISLGVTQYRPNESEVTLIHRVDTALYTAKRNGRNRVVTE 336 >UniRef50_A4BI17 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BI17_9GAMM Length = 606 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 68/334 (20%), Positives = 120/334 (35%), Gaps = 26/334 (7%) Query: 130 TGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFS------LFKN 183 + + F + + + S + L ++LL+ + + L+++ + Sbjct: 270 IAALHYVCHLFPWRWNRLLLSTSYLILAVASIYTLLAPMVEVSYYLLVYNALLVLIVLAA 329 Query: 184 GKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVIS 243 V F S ++ V A D + + Sbjct: 330 VCVVIHGMLRRHEMAFFFSRSVIPLIIAMLNDIVAASTPDYNFYFAEYALILFLFIHTQR 389 Query: 244 GASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKA 303 A RV + E + K + + D LT Sbjct: 390 QAVQFVTALRVAEHL----SNNLQREVELKTSELSLRNRELEAKHQRVKLLSQTDHLTGL 445 Query: 304 MGRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQ 357 R+S D KAL E+ L + D+D FK IND FGH +GDE L+ V L+ Sbjct: 446 YNRQSLDNRTKALFEQAEQSDSHLSLIMMDIDHFKPINDRFGHQVGDECLVHVASFLRGL 505 Query: 358 IPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVG--------SINLSTSIGVA 409 K + RFGG+EF ++ ++E +++++ I L+ S G+A Sbjct: 506 NLRHKDLIARFGGEEFTIVLPDTSIEHAQHLIEDVCTRLSKETVSGSHYEIQLTASFGIA 565 Query: 410 H--SNECPTVERLKMLADERLYKSKKNGRAQISW 441 ++ P+ E L AD+ LY++K+NGR ++ Sbjct: 566 ERVISQAPSYEELIQKADQALYQAKQNGRNRVEV 599 >UniRef50_Q1IV91 Diguanylate cyclase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IV91_ACIBL Length = 453 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 72/345 (20%), Positives = 124/345 (35%), Gaps = 44/345 (12%) Query: 127 VKNTGFISFDGKTFVYYLYPVTHNRSLIFL----LGLERFSLLSKSLAMDSENLMFSLFK 182 G + + G + +N SL+ L + L + + E L + Sbjct: 117 GGGIGAMHYTGMAAMRSYAMHRYNPSLVLLSLVIAVAFSWMALRITFLLRREPGAHELRR 176 Query: 183 NGKPV---TGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALV 239 G V G A+F V+ + + + + + V ++ F AL+ Sbjct: 177 MGGAVLMGIGIASMHYTAMFAVTFERGNTEFSTVHTVPVTHIDQLGIVVMAGMVLFGALI 236 Query: 240 AVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDD 299 + +R + + N + L + + + + D Sbjct: 237 SAYF------------DRQMSRDLRVSNERLAEMQVALLQREKELKEAVAKLEELSTRDG 284 Query: 300 LTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKI 353 LT R+ FD L A ++ L + DVD FK +ND +GHL+GD+ L KV K Sbjct: 285 LTGLYNRRFFDTTLTAECKRAARANYPISLLIIDVDCFKALNDHYGHLVGDDCLQKVGKS 344 Query: 354 LKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF----------QVGSINLS 403 L S + V R+GG+EFA+I + E +I + I ++ Sbjct: 345 LASAVRRTSDVVARYGGEEFALILPNTSEESATTIGENIRRAVLGLEIANANSTAGPFVT 404 Query: 404 TSIGVAHSNECP---------TVERLKMLADERLYKSKKNGRAQI 439 S+GV T + ADE LY++K+ GR ++ Sbjct: 405 LSVGVCTRRPSHPRSSEDILVTTNEIIRAADEALYRAKREGRNRV 449 >UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX81_9GAMM Length = 384 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 100/280 (35%), Gaps = 17/280 (6%) Query: 177 MFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFA 236 F ++ + + V ++ F + + +I+ Sbjct: 104 FFVAVNMVLAYYAGVFSVVSGVALVGGSLTGFILFNERVVYGGLFTGALATLALIILSAL 163 Query: 237 ALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAF 296 ++ S ++ + + ++ ++ + + Sbjct: 164 EVIPYASVIETNGTPLHHNATWLILLLGLSTPYIGLLVAMNSSAIRRWRQRESEVRQLST 223 Query: 297 LDDLTKAMGRKSFDEDLKALPEK-------GGYLCLFDVDKFKNINDTFGHLLGDEVLMK 349 D LT+ R+ E L + L + D+D FK+IND GHL GDE L Sbjct: 224 TDPLTQVANRRHLLERLNLEISRCERSGHSELSLLMMDLDHFKSINDEHGHLFGDEALRV 283 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF---------QVGSI 400 ++L+ Q + V R+GG+EF ++ + L I + + Sbjct: 284 TARVLREQSR-NTDLVGRYGGEEFCLLLPDTGPQGALQIAERCRQALEQADIDREDGEVL 342 Query: 401 NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 +++TSIG+A T E L ADE LY++K+ GR +I Sbjct: 343 HITTSIGLATYQMGDTNESLLHRADEALYQAKEQGRNRIV 382 >UniRef50_Q1K430 Diguanylate cyclase n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K430_DESAC Length = 526 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 73/360 (20%), Positives = 141/360 (39%), Gaps = 42/360 (11%) Query: 98 LISSDECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLL 157 L S D + F N D +Q + ++ I+ G+ F + Sbjct: 186 LASQDFGVCCGIFINNRFVDRLQKEERFSREDKTLITSTGRCFTNRAF------------ 233 Query: 158 GLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYV 217 LE+F L++ + A ++ + F + Y S E A L T Sbjct: 234 -LEKFPLVATAQAFKLQHQSYQKF---PAIPIKNYRG-------SVIGEIQAMLNTTGLE 282 Query: 218 FAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGG 277 ++++ +Y + F + V+ + +L R + +E + + L+ Sbjct: 283 ESFERSLYHSALICLGVFIITIIVLHAGTGFFLQRVKQLQSQLETKVFRRTQALQTLNEK 342 Query: 278 LFFSAADVKKLYS-MYNSAFLDDLTKAMGRKSFDEDLKALPEKGG------YLCLFDVDK 330 L + K+ + + D LT R+ F+ + L + D+D Sbjct: 343 LSQEIRERKRSQKALQKMSENDMLTNIYNRRKFNTYFSREWDAALREKRVVSLLMIDIDY 402 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK 390 FKN ND +GHL GD+ L+ V LK+++ + V R+GG+EF + +++ + + + Sbjct: 403 FKNYNDHYGHLAGDDALIAVAATLKNKLTRPRDFVARYGGEEFVCLLPETSMDAAIYLAE 462 Query: 391 EIV----------HFQVGSINLSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQ 438 ++ + V + +++ S+GVA E L AD+ LY++K+ GR Sbjct: 463 KLRLEIQKLNYVHEYSVAAGHITISVGVASAIPTAGQAKEDLIDQADKALYRAKEAGRNC 522 >UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QU32_CHLT3 Length = 606 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 105/288 (36%), Gaps = 16/288 (5%) Query: 167 KSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIF-TVSEAMEHFAYLPTGLYVFAYKKDVY 225 +++ + L N + + + +F + + + V Sbjct: 318 EAIEHFNYALTLGKELNLHNIVFESHRYLCLVFEKLEDYKAALEHHKLFYAVKTKIFSEE 377 Query: 226 LRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADV 285 T + + + +Y ++ V E + + Sbjct: 378 AERKTKNLLLQHELEEFKREAEIYRLKNVELVSANENLEVTTLALKEANAENQLLLERLR 437 Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFG 339 ++ ++ D LT R+ FDE + ++ + + D+D FK +ND F Sbjct: 438 EQAETLERLVTYDGLTGLANRRHFDEQFEYEFRRTRRYKRPLSIAMSDIDFFKKVNDNFS 497 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVG- 398 H +GDEVL KV I + + V R+GG+EF I+T E + ++I Sbjct: 498 HQVGDEVLKKVASIFRENVRA-GDLVARYGGEEFVFIFTETNKESAIRAAEKIRKAIEDY 556 Query: 399 -------SINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + ++ SIGVA + L AD +LY++K+NGR Q+ Sbjct: 557 DWSNVHAGLKVTISIGVAEDAGFDGCDELIAAADSKLYEAKRNGRNQV 604 >UniRef50_D1TF13 Response regulator receiver protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TF13_9BURK Length = 531 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 65/309 (21%), Positives = 115/309 (37%), Gaps = 25/309 (8%) Query: 154 IFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLP- 212 + + +E F L S+ + +F +G + + ++ +V+++ Sbjct: 202 LLAIRIEYFQHLLDSIDTGEQGSVFIGMADGTLLAHKPVDGRDIGGSVAKSPTFLPMTAH 261 Query: 213 -TGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFE 271 +G YV D R+ T + V + ++ R V I Sbjct: 262 DSGSYVSVSPVDGVRRIFTYAHVPGTPLIVAIAPAVDDVLAPWQRRSHVAAALTIAFGAV 321 Query: 272 RVLDGGL--FFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALP------EKGGYL 323 V+ L F + ++ A D LT R+ D+ L + + Sbjct: 322 FVVVSWLLAFALRDKQRAQAALLRLASTDPLTGLSNRRVLDKRLDDEWMRARRDNRPLSV 381 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 D+D FK NDT+GH GDEVL+ V + S V R+GG+EFAV+ T + Sbjct: 382 LFIDIDHFKRFNDTYGHESGDEVLVAVADCIASVARRSVDLVARYGGEEFAVVLPDTTAQ 441 Query: 384 ELLSILKEIVHFQVGSI---------NLSTSIGVAHSNECPTVE-----RLKMLADERLY 429 ++ ++I + ++ S+G A + T + L AD +LY Sbjct: 442 GAFAVAEQIRRKVESRVIVRGHEAPQAVTVSVGCATARPS-TADFANGLELLAAADAQLY 500 Query: 430 KSKKNGRAQ 438 +K GR + Sbjct: 501 VAKNEGRNR 509 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 74/432 (17%), Positives = 145/432 (33%), Gaps = 39/432 (9%) Query: 27 YTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVAIDLINTLNPTEEQLLVGLRTAYADSV 86 + E+ +L QS+ +++ ++ + D + + E G A+ +V Sbjct: 377 HALHRSEQELALAQSIAHVGNWISDFQKHEIRWS-DEVYRIFGMERSRWEGTHGAFMQAV 435 Query: 87 SPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYP 146 P + + R + + L P Sbjct: 436 HPGD-------RERVQAAVDRALAGLEQFD--VTHRILRPDGTERVVR---ELASVELSP 483 Query: 147 VTHNRSLIFLLG-------LERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIF 199 ++ + LE+ L + S+ + + + + Sbjct: 484 CGTPARMVGTVQDITEQYHLEQEQRLLAATFESSQAIFITDVEGTIQRVNATFTQLTGYT 543 Query: 200 TVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGI 259 + L +G + ++++ V + + L + I Sbjct: 544 EEEAVGANPRILNSGRQDRDFYQEMFRTVRETGHWQGEIWNRRKNGEIFPL--HEVVTAI 601 Query: 260 VEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK 319 + + I + D + ++ + AF D LT A R F+ L + Sbjct: 602 HDDQGEIEYYIAMFHD-----ITRQKELEAALEHQAFYDPLTDAANRGYFETLLDQEARR 656 Query: 320 ------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEF 373 L L D+D FK INDTFGH +GDEVL +V LK ++ + + R+GG+EF Sbjct: 657 AQRYAHPCSLLLLDIDHFKRINDTFGHEVGDEVLRFLVHALKGRLR-EADVLGRWGGEEF 715 Query: 374 AVIYTGGTLEELLSILKEIVHFQVGSIN-----LSTSIGVAHSNECPTVERLKMLADERL 428 V+ G E + +++ + ++ S+GVA ++ ADE + Sbjct: 716 VVLLPGTDAERGQHVAEQLREQVTATAFPCVGLVTISLGVAECRPGESIRDWVKRADEAM 775 Query: 429 YKSKKNGRAQIS 440 Y +KK GR ++ Sbjct: 776 YVAKKGGRNRVV 787 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 234 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 69/324 (21%), Positives = 120/324 (37%), Gaps = 27/324 (8%) Query: 143 YLYPVTHNRSLIFLLGLERFSLLS---------KSLAMDSENLMFSLFKNGKPVTGDEYN 193 ++ V N ++I + L L + L+ ++ +L D Sbjct: 64 FVSIVLANTAIIIGVVLIYRGLFRFRGISLRHERWLSTTLVLVLAALMYVYTFHIPDVNL 123 Query: 194 AKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLV-R 252 A V A + ++ + + + + +A S + Sbjct: 124 RIQAFSIVFAAACLIGATGFLRHRESHNRMAGKMLIAMFLLVSAFFIFRFFRSFYEVPPE 183 Query: 253 RVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDED 312 +N G + AI+ F +L A + + A +D LT R++FDE Sbjct: 184 DFMNAGWLSALAIVAGEFLVILSSFCTIWMASDELQDELSEIARIDPLTGLYNRRAFDEC 243 Query: 313 LKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY 366 + + + D+D FK +ND +GH +GDEVL + LK I V Sbjct: 244 CDIEFSRAQRSGAPFAIIMCDLDHFKRVNDRYGHHVGDEVLRRFANTLKEHIR-KHDVVA 302 Query: 367 RFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS---------INLSTSIGVAHSNECP-T 416 RFGG+EF ++ G E+ L + +++ + + LS S GVAH + Sbjct: 303 RFGGEEFVLLLPGKDTEQGLEVAEKLRAKTADTQITIGDDVCLTLSASFGVAHYDSSDRE 362 Query: 417 VERLKMLADERLYKSKKNGRAQIS 440 + AD LY +KK GR ++ Sbjct: 363 WSAVLHRADNALYAAKKQGRNRVV 386 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 234 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 15/188 (7%) Query: 265 IINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK----- 319 +I + VL + + + ++L M A D LT R+ F E + E+ Sbjct: 103 VIKPYSLSVLLARVRSALREKERLDLMEKWATTDPLTGLYNRRFFFEQAQRELERVQRNE 162 Query: 320 -GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT 378 + D+D FK +ND +GHL+GD+VL + K+ K RFGG+EF + Sbjct: 163 TDASFIILDIDHFKKVNDEYGHLVGDDVLEGLAKLFKETFR-KVDLCCRFGGEEFVICLP 221 Query: 379 GGTLEELLSILKEIVH--------FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYK 430 E L + + + G ++++ S+GV+ +NE T+E + AD+ LY+ Sbjct: 222 DTDTEGALLVAERTRKKVEELSFNTEKGPLHVTISLGVSSANENTTLEDMLKRADDALYQ 281 Query: 431 SKKNGRAQ 438 +K+NGR + Sbjct: 282 AKQNGRNR 289 >UniRef50_B2SWP1 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B2SWP1_BURPP Length = 516 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 102/344 (29%), Gaps = 62/344 (18%) Query: 114 YCADIMQVVKYRHVKNTGFISFDGKTFVYYLY-PVTHNRSLIFLLGLERFSLLSKSLAMD 172 Y + + + + DG + + P +L RF Sbjct: 190 YFRRLFAGMNLGAGGSMALMLSDGTMLMRRPFDPKIIGINLTGTANYSRF-------TQQ 242 Query: 173 SENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLI 232 F + + + + + R + Sbjct: 243 PSGDFFGTAAIDGVERWYAFRHIDMYPLILDVALSTRDIYVEWR---------HRAWIIG 293 Query: 233 IFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMY 292 AAL I + L+ + R E + Sbjct: 294 SLIAALDVTIIALAVLFSYQLRYRRAAEE----------------------------ELR 325 Query: 293 NSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEV 346 A D LT R++F+E + + + L DVD FK ND +GH GD+ Sbjct: 326 VLARTDGLTGLNNRRTFEEHAEDEWRRAQRNAWPLSMLLIDVDSFKGFNDLYGHSAGDDA 385 Query: 347 LMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI---------VHFQV 397 L V + + + R+GG+EFAV+ I ++I H Sbjct: 386 LTAVARCISQSVRRPGDTAARYGGEEFAVLLPDTDETGAAFIAEKIRAAVQALQLRHVAS 445 Query: 398 GSINLSTSIGVAHSNEC--PTVERLKMLADERLYKSKKNGRAQI 439 L+ SIG+A + T L AD+ LY++K GR ++ Sbjct: 446 SQHVLTVSIGIATTRGEAFATSRALLNAADDALYEAKDAGRNRV 489 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 93/233 (39%), Gaps = 13/233 (5%) Query: 219 AYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGL 278 +Y + + VA I+ + L ++ + + Sbjct: 490 SYVLRSVVEGTPWSVVLTLPVAGITASRLLGIIIT-LQLALTALFYFFGRERGVRDRVQQ 548 Query: 279 FFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFK 332 + ++ ++ A D LT R F+E L + L +FDVD FK Sbjct: 549 LLRSELQERAAALARQATTDPLTGLHNRLRFNEGLAQELARVRRTGQPLSLVMFDVDHFK 608 Query: 333 NINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI 392 +ND +GH GD+VL+++ + +Q+ + R+GG+EFA++ L + + + + Sbjct: 609 EVNDRYGHPTGDQVLIRLSQTAAAQLR-QTDLLARWGGEEFAILLVDADLHAAVEVAENL 667 Query: 393 VHFQ-----VGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 +++ S GVA + + L AD LY++K NGR ++ Sbjct: 668 RRLVARTPFDQIGSVTASFGVAECRPDESADSLLERADAALYRAKSNGRNRVE 720 >UniRef50_D1TJS9 Response regulator receiver protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TJS9_9BURK Length = 577 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 64/344 (18%), Positives = 102/344 (29%), Gaps = 62/344 (18%) Query: 114 YCADIMQVVKYRHVKNTGFISFDGKTFVYYLY-PVTHNRSLIFLLGLERFSLLSKSLAMD 172 Y + +K + + DG + Y P T +L RF Sbjct: 251 YFHRLFDGMKLGPSGSMALMLSDGTMLMRRPYDPKTIGINLTGTANFSRF-------VKQ 303 Query: 173 SENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLI 232 F + + + + + + R + Sbjct: 304 PSGDFFGTAAIDRVERWYAFRHIDGFPLILDVALSTRDIYVQWR---------RRAWIIG 354 Query: 233 IFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMY 292 AL I + L+ + + R E + Sbjct: 355 TLIVALDVTIIALAILFSRQLRLRRAAEE----------------------------ELR 386 Query: 293 NSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEV 346 A D LT R++F+E + + L L DVD FK ND +GH GDE Sbjct: 387 ELARTDGLTGLNNRRTFEEHVNDEWRRAQRNGRPLSLLLIDVDNFKGFNDLYGHSAGDEA 446 Query: 347 LMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI---------VHFQV 397 L+ V + + + RFGG+EFAV+ I ++I H Sbjct: 447 LIGVARCIAQNVRRPGDTAARFGGEEFAVLLPDTDATGAQRIAEQIRAAVQALQCRHVAS 506 Query: 398 GSINLSTS--IGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 L+ S A T L AD+ LY++K GR ++ Sbjct: 507 THHVLTVSAGAATAQDAAFATSRALVDAADQALYRAKDGGRNRV 550 >UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales RepID=A3WKT4_9GAMM Length = 364 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 119/322 (36%), Gaps = 31/322 (9%) Query: 151 RSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIF----------- 199 + I + F +L+ + L +++ G N Sbjct: 27 AASIDVAFFFIFLILNSPILAWVNLLSIAMYLTAYWAFGQRKNMLAISLIWLEVLYHSAL 86 Query: 200 -TVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIF-FAALVAVISGASCLYLVRRVINR 257 T+ + + ++V A + L+ L + + S Y + IN Sbjct: 87 GTLMIGWDSGFHYFLLMFVPAIFVSMSLKPAVLTLLGLWVYYLSLDLFSWYYPAMQPINA 146 Query: 258 GIVEKEAIINNHFERVLDGGLFFSAADVKKLY--SMYNSAFLDDLTKAMGRKSFDEDLKA 315 V I N ++ G L + L + A D LTK R+ E LK Sbjct: 147 TAVVGVHIFNLTVVFIMFGYLALYYLNKVNLTHDQLRFYATTDPLTKLRNRRHMSELLKR 206 Query: 316 LPE------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFG 369 + + + L D+D FK++NDT GH +GD+VL IL+ + D KV R+G Sbjct: 207 ALQNKHAEQRNVSVLLLDLDHFKSVNDTHGHEVGDKVLRITADILRDTVR-DHDKVSRWG 265 Query: 370 GDEFAVIYTGGTLEELLSILKEIVHF---------QVGSINLSTSIGVAHSNECPTVERL 420 G+EF V L + + I +I L+TSIGV+ +V L Sbjct: 266 GEEFLVFLPRTNLNHAAQVAERIRKAIAKYPWHTVINENIQLTTSIGVSELKPDDSVNTL 325 Query: 421 KMLADERLYKSKKNGRAQISWQ 442 AD+ LY+ K+ GR + + Sbjct: 326 VKRADDALYRGKEAGRNWVELE 347 >UniRef50_Q2SNU2 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNU2_HAHCH Length = 367 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 67/316 (21%), Positives = 127/316 (40%), Gaps = 26/316 (8%) Query: 142 YYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTV 201 + H +L L +++S + ++ + +F Y + Sbjct: 46 WLWTHTAHASALFLFCALMLMNVISYNRTLNQQ--LFKTLFLWLVGLLFLYLIAGGGESN 103 Query: 202 SEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVE 261 + + + + P YV + ++ +I AL+A+I L VR V N Sbjct: 104 TGILWFYVFPPFVFYVAGLRTGSWM-----LIIMVALIAIIFRFPELPWVRTVYNLDFQL 158 Query: 262 KEAIINNH---FERVLDGGLFFSAADVKKLYSMYNSA-FLDDLTKAMGRKSFDEDLKALP 317 + A + F V+D + ++ + +Y A D+LT+ R+ + L+ Sbjct: 159 RFAATVSFVSVFAFVMDHSRRKARQELINMARLYEKAARTDELTQLPNRRDMQQQLEKEY 218 Query: 318 EK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGD 371 + + L D+D FK INDT+GH GD VLMK+ ++L + R+GG+ Sbjct: 219 FRYKRHGSHFSVILLDIDHFKMINDTYGHDAGDFVLMKISELLVNACR-KMDMAARWGGE 277 Query: 372 EFAVIYTGGTLEELLSILKEIVH--------FQVGSINLSTSIGVAHSNECPTVERLKML 423 EF + +L + L++ + + ++ I + S GV ++ + L Sbjct: 278 EFLIQLPDTSLVQALTLAERLRKSIEASPLQYKNQEIRYTISCGVCSISQAKDLASLLKQ 337 Query: 424 ADERLYKSKKNGRAQI 439 AD LY++K GR + Sbjct: 338 ADVNLYQAKIKGRNMV 353 >UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NS82_9VIBR Length = 385 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 56/323 (17%), Positives = 116/323 (35%), Gaps = 15/323 (4%) Query: 132 FISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDE 191 + K L ++ L+ + RF + ++ S ++ Sbjct: 61 ITHWVSKILANSLMAFSYIILLLGVCQFRRFPRIIANIGFYSFPILIVGLTYFTFFMPST 120 Query: 192 YNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYL- 250 + ++ A L + + + Sbjct: 121 NARVILMTVYVSSLCFIAILANQKGKSTDITPSKFLLSLGLATQGGYNLFRFIWTLFEER 180 Query: 251 VRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFD 310 + + G+ + A ++ + G + + ++Y+++ D+LT+ R++ + Sbjct: 181 IDDFMISGMAHQLAFVSTLLMVIFIGFSVTWMLTGRLVATIYDTSIKDELTQLYNRRALE 240 Query: 311 EDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGK 364 E L + + L D+D FK +NDT+GH GD VL K+L Q D Sbjct: 241 ELLPKEIARSSRHKQPLSVLLLDIDHFKKVNDTYGHQAGDRVLRTTGKLLILQTRKD-DL 299 Query: 365 VYRFGGDEFAVIYTGGTLEELLSILKEIVHFQ-------VGSINLSTSIGVAHSNECPTV 417 +R+GG+EF V+ +E+ + + +++ + + S GV N Sbjct: 300 SFRYGGEEFLVLLPNTDVEKAVIVAEKLREAIKRARMLPTNVDSCTASFGVTQFNGEDDW 359 Query: 418 ERLKMLADERLYKSKKNGRAQIS 440 + AD+ LY +K+NGR Q++ Sbjct: 360 QTAIERADQALYSAKENGRNQVT 382 >UniRef50_Q4KKJ4 Diguanylate cyclase, putative n=5 Tax=Pseudomonas fluorescens RepID=Q4KKJ4_PSEF5 Length = 727 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 15/187 (8%) Query: 268 NHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GG 321 + + + L A +D LT R ++ E L+ + Sbjct: 540 QSLAERVSSMEQEAQGYREHLEEQRQKALIDPLTGLPNRAAWSERLEHEVGQWQQHGNSL 599 Query: 322 YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT 381 L + D+D FK IND +GHL GD+VL + +L+ ++ + RFGG+EF ++ Sbjct: 600 LLAMLDLDHFKRINDNYGHLAGDKVLKIIANVLRKRLR-GSDFIARFGGEEFVLLLPNTP 658 Query: 382 LEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKK 433 + I++ + HF+ + ++ S+G++ + + AD+ LY++K Sbjct: 659 WPVGVRIVEALRAAIEACPFHFKGEPVTITVSVGLSAFKAGDRSDLVIKRADQALYRAKD 718 Query: 434 NGRAQIS 440 GR ++ Sbjct: 719 AGRNRVE 725 >UniRef50_Q31GI5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GI5_THICR Length = 532 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 11/199 (5%) Query: 252 RRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGR----K 307 ++I ++ I + FF +++ ++ A D+LT R + Sbjct: 329 IKLITENFLQHLLINEFLLLIISLLVFFFIRNQIRQRRLLHKMAKTDNLTGLPNRSIFKR 388 Query: 308 SFDEDLKALPEK--GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKV 365 + +E++K +K L FD+D FK INDT+GHL+GD+VL KV + ++ + K Sbjct: 389 ALNENIKRSNKKQWPLSLIFFDIDHFKKINDTYGHLVGDKVLKKVARNIEDGL-THKDIF 447 Query: 366 YRFGGDEFAVIYTGGTLEELLSILKEIVH----FQVGSINLSTSIGVAHSNECPTVERLK 421 R+GG+EF ++ L++ + + + I +++S GV+ T E Sbjct: 448 ARWGGEEFVILLPNTDLQDAEKVAERLRQKLEAMTDFDITITSSFGVSDLRPDDTAESFM 507 Query: 422 MLADERLYKSKKNGRAQIS 440 DE LY+SK+ GR +++ Sbjct: 508 QRGDEMLYRSKEQGRNRVT 526 >UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece RepID=B1WQB8_CYAA5 Length = 493 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 18/207 (8%) Query: 253 RVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDED 312 + + I E + + + + + L + LD LT+ R+ FDE Sbjct: 282 NQLIQWIDEHITELKEARQTLEKRVEQRTIELQQALKKLKALVNLDGLTQIFNRRYFDEV 341 Query: 313 LKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY 366 L ++G L L DVD FK N+T+GHL GD L +V + ++ Q+ V Sbjct: 342 LYREWQRGRREKSVISLILCDVDYFKIYNETYGHLGGDSCLQEVAQGIRRQVKRPSDLVA 401 Query: 367 RFGGDEFAVIYTGGTLEELLSILKEIVHFQVG----------SINLSTSIGVAH--SNEC 414 R+GG+EF ++ L L++ + I + S +++ S+GV E Sbjct: 402 RYGGEEFVILLPNTDLNGALALAEMIRNAIEAMNIPHENSLVSDHVTISMGVTSKIPQET 461 Query: 415 PTVERLKMLADERLYKSKKNGRAQISW 441 E L AD+ LY++K+NGR + + Sbjct: 462 DEYEHLIEEADDALYQAKENGRNCVCY 488 >UniRef50_B4S175 Signaling protein with a acyltransferase and GGDEF domains n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S175_ALTMD Length = 628 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 67/332 (20%), Positives = 122/332 (36%), Gaps = 33/332 (9%) Query: 141 VYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKN-AIF 199 + ++ V+ LIF L + L + ++ K V Y Sbjct: 288 ISWVCGVSILAGLIFPYSLMVKAFLLLLTLTIIFTMWLGVWLTLKGVVVARYFTIAWGFL 347 Query: 200 TVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLV-------- 251 VS + + + + + + A ++A+ S L+ Sbjct: 348 LVSGLSANLDNVNIIQLPISSNNLLIIGGAVESLILALILAINYSHSRDDLIDAQQFALE 407 Query: 252 ----RRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKL----YSMYNSAFLDDLTKA 303 ++E + + E ++ +++L + +D LT A Sbjct: 408 QEKQASTAKESLLEVQKRYQDDLEYKVEERTLELEITLRELSEVNQELERLNAIDPLTGA 467 Query: 304 MGRKSFDEDLKALP------EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQ 357 R+ FD+ L++ + L + DVD FK IND +GH GDE L+ V K+ + Sbjct: 468 HNRRHFDKRLRSEGRRSRREQTPLSLVIIDVDHFKKINDEYGHDGGDECLIHVTKVFQQH 527 Query: 358 IPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVA 409 I + R GG+EFA+I LE + + + ++ INL+ S GV+ Sbjct: 528 IHRPTDDLCRIGGEEFAIILPNTDLEGAFHVAENMRSSLEASPLEYENEMINLTASAGVS 587 Query: 410 H--SNECPTVERLKMLADERLYKSKKNGRAQI 439 ++L DE LY++K GR ++ Sbjct: 588 TTVIVGEDHTQQLFKFTDELLYEAKAAGRNKV 619 >UniRef50_Q2BQL8 Probable two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQL8_9GAMM Length = 505 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 18/220 (8%) Query: 239 VAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLD 298 + V ++ L R + + + N VL + + + SA +D Sbjct: 280 LPVAFVSADLDDQRELDAYNAGAADFLTLNRAPAVLQSRIQILMQLKQSQDQLARSARVD 339 Query: 299 DLTKAMGRKSFDEDLKALP------EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 LT+ R+ F+ +++ ++ L + D+D FK ND +GHL GD L V + Sbjct: 340 GLTQVNNRREFERNIEMEWRRAQRSKRSLALIMLDIDHFKPFNDGYGHLAGDGCLRTVAQ 399 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV----------HFQVGSINL 402 +K I + V R+GG+EF VI L+ I + I F + Sbjct: 400 TIKHSIQRAQDMVCRYGGEEFVVILPETDLDGAQMIAERIRKAIAKLKINHEFSSTDNTI 459 Query: 403 STSIGVAHSNECP--TVERLKMLADERLYKSKKNGRAQIS 440 + S GVA + + L +LAD+ LY++K GR Q++ Sbjct: 460 TISAGVACLSPSQEGSPHELILLADQGLYQAKAQGRNQVA 499 >UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=2 Tax=Desulfovibrio RepID=B8DIR5_DESVM Length = 474 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 14/191 (7%) Query: 264 AIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL------P 317 A + F ++ L+++ + + A D LT R +E + Sbjct: 286 ARVAGFFALLVGVVLWYNRRLKRMNAVLERLARTDPLTDLPNRSRLNELFRREVERAQRY 345 Query: 318 EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIY 377 + + + D+D FK +ND GHL GD L +++ + V R+GG+EF V+ Sbjct: 346 RRPFSIVILDIDHFKRVNDELGHLAGDRTLQVFAGVVRDSVR-GTDTVGRWGGEEFLVLC 404 Query: 378 TGGTLEELLSILKEIV------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKS 431 T EE + + + + F+ G I+ + S GVA E +V+ L AD LY++ Sbjct: 405 PETTAEEAVQLAERLRGSLRATQFEGGRIH-TLSAGVAAFREGDSVDTLLHRADTALYRA 463 Query: 432 KKNGRAQISWQ 442 K GR ++ + Sbjct: 464 KNGGRDRVEVE 474 >UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLJ7_DESAH Length = 576 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 125/355 (35%), Gaps = 31/355 (8%) Query: 114 YCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDS 173 +C D + + + + +T + R LS+++ Sbjct: 221 HCPDESHKYILNKSEPLFDEHNNPALMLGVVQDITQLKE-----AEYRLITLSQAVEQSG 275 Query: 174 ENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLII 233 ++ + + + + L +G++ + K+++ + + Sbjct: 276 STILITDLNGVIEFVNPAFTHVTGYTPEEAVGKSTSILKSGMHPPEFYKNLWDTIISGDT 335 Query: 234 FFAALV-------AVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVK 286 + ++ A+ ++ + N ++ Sbjct: 336 WKGQIINRKKDGELYWESATISPVMGKDGNITHYSAVKEDITSRKKAEKLLKETQKRLET 395 Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGH 340 + D LT R+ FDE L ++ L + D+D FK+ NDT+GH Sbjct: 396 ANQKLQTLVTSDGLTMIANRRKFDEYLDQEWQRCKRAKVWLSLLMCDIDYFKHYNDTYGH 455 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI-------- 392 GD+ L K+ + ++ + V R+GG+EFAVI + L + + I Sbjct: 456 QAGDDCLRKIAQAMEKTVVRPMDLVARYGGEEFAVILSDTGLNGACHVARRIQEDVKNLN 515 Query: 393 VHFQVGSI--NLSTSIGVAHSNECP---TVERLKMLADERLYKSKKNGRAQISWQ 442 + S+ +++ SIG+ +++ L ADE LYK+K+ GR ++ + Sbjct: 516 IAHSESSVSTHVTLSIGITCLIPDDEDLSMDLLIKTADEALYKAKRKGRNRMELK 570 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 17/177 (9%) Query: 282 AADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNIN 335 + + LD LT+ R FD L + L L DVD FK N Sbjct: 1083 QQLESANLELKKLSCLDGLTQVANRHRFDMYLDQEWRRLMRSQQFLSLILCDVDHFKGYN 1142 Query: 336 DTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV-- 393 DT+GHL GD+ L +V +++K+ + V R+GG+EFA+I L L + ++I Sbjct: 1143 DTYGHLAGDQCLQQVAQVIKNAVGRPADLVARYGGEEFAIILPDTPLRGALYVAEQIRQQ 1202 Query: 394 -------HFQVGSINLSTSIGVAHSNECP--TVERLKMLADERLYKSKKNGRAQISW 441 H Q ++ S GVA + + L ADE LY++K NGR Q+ + Sbjct: 1203 VQYLTIPHPQSTHQWVTLSSGVASFIPSAALSPKALINAADEALYQAKANGRNQVVF 1259 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 18/186 (9%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK----ALPEKG--GYL 323 VL L+ + + + A D +T+ F+ L +G + Sbjct: 389 LAEVLGLHLYMIVIQQRLTRLIRHQASYDVITQLPNGIIFNHRLSLALVDAVNQGNMLGV 448 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKG---KVYRFGGDEFAVIYTGG 380 + D+++FK IND+ GH +GD +L KV L++ + + R+ G F ++ + Sbjct: 449 VILDLNQFKRINDSLGHGVGDFLLTKVRDRLQNALDTYSIFNPLLARWHGARFIILLSKL 508 Query: 381 T-LEELLSILKEIVH-------FQVGSINLSTSIGVA-HSNECPTVERLKMLADERLYKS 431 + +E + + +++++ Q +I L S+G+A + T E L A+ +Y++ Sbjct: 509 SYSDESVMVCQKLLNDFQEPFYVQSQAIYLGASLGIALAPYDGDTAEILLKNAESAMYEA 568 Query: 432 KKNGRA 437 KK G+ Sbjct: 569 KKQGKN 574 >UniRef50_C7HYK2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomonas intermedia K12 RepID=C7HYK2_THIIN Length = 780 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 124/351 (35%), Gaps = 48/351 (13%) Query: 105 IQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSL 164 +++ +F + + + + + DG + P T + + Sbjct: 200 VELNDFLERWRRSVAAAEYAMPGMSIALMRADGYLLARWPAPKTDDLPRFY--------- 250 Query: 165 LSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDV 224 + + + ++ + +F+ + L + + Y V Sbjct: 251 -----SAKRQGELARAARHAPDGAT------SGVFSGRVDSDDIPRLGAWVRLPHYDVLV 299 Query: 225 YLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAAD 284 + V +I+ + + A++ + V SA Sbjct: 300 NMTVPRALIW-----------RDFWRAYWPALTILALWLAVLTLAYRLVRKQAERDSAQL 348 Query: 285 VKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTF 338 + MY A D LT + R+ E L+ ++ L LFD+D FK IND F Sbjct: 349 RDRSEIMYRLANQDSLTGLLNRRGMGEYLQRAHDRARDHGIGYALVLFDLDHFKLINDGF 408 Query: 339 GHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQ-- 396 GH GD VL +V +L++++ + +V R+GG+EF V+ +L+ + +++ Sbjct: 409 GHAAGDAVLQQVAHLLQTRVRKE-DQVARWGGEEFLVLLPDSSLQTAHATAEKLRELISH 467 Query: 397 ------VGSINLSTSIGVAHSNECPTV--ERLKMLADERLYKSKKNGRAQI 439 + L+ S GV+ + L D LY +K GR ++ Sbjct: 468 TRMSVGGAELRLTASFGVSAWEPGGPLASAELLGQCDSALYNAKAGGRNRV 518 >UniRef50_A4CE22 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CE22_9GAMM Length = 357 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 69/322 (21%), Positives = 128/322 (39%), Gaps = 21/322 (6%) Query: 137 GKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKN 196 G F++YL + SL+ + L ++ + + + F + G Sbjct: 36 GILFLFYLQHIASQDSLLTCILLASSLVVLSNAVISHFHPYFGVSCY-ITGLGVVGLILG 94 Query: 197 AIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVIN 256 +FT +L V+ D + ++ F+A++ ++ + + Sbjct: 95 LVFTGGHQNTALYWLYPFPLVYFILFDYRKGLVANLLIFSAILFLLYQPDWILAEYQPAE 154 Query: 257 RGIVEKEAIINNHFERVLDGGLFFSAADVKKL-YSMYNSAFLDDLTKAMGRKSFDEDL-- 313 + ++ V + F S ++ + Y A D LT+ R+ D Sbjct: 155 KSRFIASYLVTIFLSFVAEYFRFHSHQELSSINYQRQKQANTDPLTQLPNRRFLDSVFFI 214 Query: 314 --KALPEK--GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFG 369 P+ + + D+D FK +NDT+GH GD VL V +LKS + V R G Sbjct: 215 GADREPKHYFPMVVVMADIDFFKRVNDTYGHDTGDHVLKHVASLLKSSLR-GFDVVARIG 273 Query: 370 GDEFAVIYTGGTLEELLSILKEIV------------HFQVGSINLSTSIGVAHSNECPTV 417 G+EF ++ L + +S+ ++I + Q I+L+ S GVA ++ + Sbjct: 274 GEEFLILLPQTMLVDGISVAEKIRIECQNTPFNQFDNLQQVYIDLTVSFGVAEASSAEQL 333 Query: 418 ERLKMLADERLYKSKKNGRAQI 439 M AD +LY +K+ GR Q+ Sbjct: 334 NNAIMAADSKLYLAKEQGRNQV 355 >UniRef50_A6CMH3 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bacillus sp. SG-1 RepID=A6CMH3_9BACI Length = 346 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 70/304 (23%), Positives = 118/304 (38%), Gaps = 18/304 (5%) Query: 150 NRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFA 209 +++ L L F ++S + ++ + + K +A + VS +E Sbjct: 45 RINMVILPTLILFFIISSWIVFFKKDWIENTEKFNIIAICL-VSAIKFTYVVSYELEQTG 103 Query: 210 YL--PTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIIN 267 L T Y +L L + A+ + +Y +I ++ Sbjct: 104 TLGTFTFWMPIFYMFLFFLLNSRLALLTIAITYIWFLGVGVYKFPELIGTPA--ATILVQ 161 Query: 268 NHFERVLDGGLFFSAADVKKL----YSMYNSAFLDDLTKAMGRKSFDEDLKALPEKG--G 321 F ++ F VK+ M A D LT R+ D+ L +K Sbjct: 162 YMFANLVFILTLFFLQTVKQRYIKAEVMEELANTDYLTGLPNRRKIDQALHQALKKQQKI 221 Query: 322 YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT 381 + D+D FK INDTFGH GDEVL + + + + R+GG+EF +I Sbjct: 222 SIIYLDIDHFKQINDTFGHTAGDEVLKEFTNETLEVLKEEN-MLGRWGGEEFMIILKN-D 279 Query: 382 LEELLSILKEIVHFQVGS-----INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGR 436 L E + ++I +L+ S GV E T++ L AD+ LYK+K +GR Sbjct: 280 LNEAAILAEKIRAHIAQHRFEAVGSLTASFGVTALQEGDTLDTLLNRADKALYKAKNSGR 339 Query: 437 AQIS 440 ++ Sbjct: 340 NKVV 343 >UniRef50_A0YZR1 Putative diguanylate cyclase (GGDEF domain) n=2 Tax=Cyanobacteria RepID=A0YZR1_9CYAN Length = 328 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 20/215 (9%) Query: 246 SCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMG 305 ++R+ I R + + ++ ++ + + A LD LT+ Sbjct: 115 IHWPVLRQRIRRIL--QTQWAMKELKKQIERSRTLTEQLETANQKLEQIAALDSLTQIAN 172 Query: 306 RKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIP 359 R+ FD+ L + ++ L L DVD FK NDT+GH GD L +V + + ++ Sbjct: 173 RRRFDQGLHSEWKRLSRERLPLSLILCDVDFFKAYNDTYGHRAGDLCLQQVAQTICEKVQ 232 Query: 360 VDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSIN--LSTSIGVA 409 V R+GG+EFA+I L+ + + ++I H ++ ++ S+GVA Sbjct: 233 RPADLVARYGGEEFAIILPNTQLQGAVKVAEDIRHSLHAIEIEHPNSRVSNFVTLSLGVA 292 Query: 410 HSNECP--TVERLKMLADERLYKSKKNGRAQISWQ 442 + + L AD LY++KK GR ++ ++ Sbjct: 293 SLIPNHYLSEDFLIGEADRALYEAKKAGRDRVVFR 327 >UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax=Pseudomonas fluorescens RepID=Q3KAB6_PSEPF Length = 559 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 14/199 (7%) Query: 255 INRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK 314 + + ++ KE + + +AA + N A D LT R+ FDE L Sbjct: 350 MTQSLLAKERELQETNASLEATVAQRTAALTLANAELLNLATHDGLTGVYNRRRFDEKLT 409 Query: 315 ------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRF 368 + L L D D FK INDT GH GD+VL ++ ++++ I V R+ Sbjct: 410 EYSLLFRRTGRPFALLLIDADHFKRINDTHGHAAGDDVLRQLAQLIQISIRS-TDFVARY 468 Query: 369 GGDEFAVIYTGGTLEEL-LSILKEIVHFQVGS-----INLSTSIGVAHSNECP-TVERLK 421 GG+EFAV+ + + ++I + ++ SIGV+ ++ T L Sbjct: 469 GGEEFAVLLPEIAKPDTPDIVAEKIRSAIAEADFPAVGPVTVSIGVSLADPADNTPTTLV 528 Query: 422 MLADERLYKSKKNGRAQIS 440 AD++LYK+K GR Q++ Sbjct: 529 KRADQQLYKAKAAGRNQVA 547 >UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AX52_RUBXD Length = 378 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 110/320 (34%), Gaps = 17/320 (5%) Query: 137 GKTFVYYLYPVTHN-----RSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDE 191 G+ F+ PV ++ + + L A S ++ L TG Sbjct: 57 GELFLRVGLPVLAAFCLWCMWALWSRRVPLWRLERAVFAAISAFVLGQLAFRIFAGTGWN 116 Query: 192 YNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLV 251 + + T + + ++ + L + A++ + + Sbjct: 117 MDQASLTETTYPMLAILCIIAQLIFDTQTALRLSLGLFGTATALVGAGALVEESGHRITL 176 Query: 252 RRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDE 311 + A +M+ A D LT R+S Sbjct: 177 DQTAWIAQQSAFLAAVIALVYATSYVKSQLARQRTLAEAMHRLAHTDPLTGISNRRSLYA 236 Query: 312 DLKALPE------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKV 365 L+ E K + LFD+D+FK +NDT+GH GD L +V ++ + + Sbjct: 237 ALRREMEAARRYGKPLSVILFDLDRFKLLNDTYGHNQGDAALRRVAHTARAALRA-SDHL 295 Query: 366 YRFGGDEFAVIYTGGTLEELLSILKEIVHFQV-----GSINLSTSIGVAHSNECPTVERL 420 R+GG+EF V+ L++ + + + G L+ S GVA + E L Sbjct: 296 GRWGGEEFIVLAPETDLDQARHLAERLREAIALDRPPGRPPLTASFGVASCRPDDSPEDL 355 Query: 421 KMLADERLYKSKKNGRAQIS 440 ADE LY++K GR + Sbjct: 356 LRRADEGLYRAKAGGRNRAE 375 >UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TG17_HELMI Length = 324 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 24/235 (10%) Query: 228 VCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVL-------DGGLFF 280 + + + A + + + + + + + + + L Sbjct: 79 IMVTALTNIEDLDRAFAAGAMDYIMKPVKKRELLARIRSALALKTEMDRRKEREEELLRV 138 Query: 281 SAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNI 334 +A + + + N + LD LT R+ FDE L + ++ L LFD+D FK Sbjct: 139 TAELEEAVRKLQNLSSLDGLTGLANRRRFDEYLASEWKRAIRNGTPISLILFDIDWFKPY 198 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH 394 NDT+GH+ GD+ L + ++ + V R+GG+EFAVI + E L++ + I Sbjct: 199 NDTYGHIQGDDCLKAIASLMPKVVRRSSDLVCRYGGEEFAVILPDTSQEGALAVAESIRE 258 Query: 395 FQVGSI---------NLSTSIGVAHSNECPTVE--RLKMLADERLYKSKKNGRAQ 438 + ++ S+GVA + P+ E L ADE LY++K+ GR + Sbjct: 259 ALSEAGIEHRQSPLDRVTVSVGVATAYPSPSSEPVTLIGYADEALYEAKRQGRNR 313 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 81/219 (36%), Gaps = 19/219 (8%) Query: 234 FFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYN 293 + L+++ G + E ++ + + + Sbjct: 84 YLFPFKPDSYFGCHFDLMQQSCTMGPLRDEDNAITSLFLIVQDVTELATYE----QKLIE 139 Query: 294 SAFLDDLTKAMGRKSFDEDLKAL------PEKGGYLCLFDVDKFKNINDTFGHLLGDEVL 347 +D LT R+ + LK + L + D+D FK +NDT GH GD VL Sbjct: 140 MNTVDALTGVYNRRFLESRLKEECDRYGRYSRPFSLMMIDIDFFKKVNDTHGHQGGDLVL 199 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS-------- 399 V + I + R+GG+EF + + ++ + + Sbjct: 200 KNVAAGAAAMIR-KSDFLARYGGEEFCCLLPETDCDAAETVAEHLRAHIENMEHLFQKKV 258 Query: 400 INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 I ++ S+G+A + E L ADE LY++K++GR + Sbjct: 259 IRVTISLGIACFAPDDSPETLVKRADEALYQAKRSGRNR 297 >UniRef50_D0J6P1 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Proteobacteria RepID=D0J6P1_COMTE Length = 462 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 66/338 (19%), Positives = 131/338 (38%), Gaps = 26/338 (7%) Query: 120 QVVKYRHVKNTGFISF------DGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDS 173 VV YR +T + + D K + + V + S + + +LL+++L + Sbjct: 94 SVVNYRKDGSTYHVEWNISPVRDEKGVIRHFVAVQRDISE-RVQAEQERALLARALNATN 152 Query: 174 ENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLII 233 + ++ + + + + A + L +GL+ + + + Sbjct: 153 DGILITDRDSTIVFVNEAFEALTGYSAAELLGQPTEMLRSGLHEPEFYAQLQEALSLGHN 212 Query: 234 FFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYN 293 F A + Y + + + E+ +H+ G + V++ + Sbjct: 213 FRATFINRHKSGGVYYAEQSI---AALRDESGQISHYV----GASKDISRMVQREMELRE 265 Query: 294 SAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVL 347 A D LT + R + + +LK + + L D+D FK +ND FGH+ GD VL Sbjct: 266 RANRDKLTGLLNRHAGETELKRNQLQAQNQLRPYGVILGDIDLFKQVNDRFGHVAGDRVL 325 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV-----HFQVGSINL 402 V +L ++ + R+GG+EF ++ + +L + + I Sbjct: 326 KMVAHVLSGKVRR-YDRAVRWGGEEFLIVLSDASLGVAAGLAERIRCAVAECADPEVGRF 384 Query: 403 STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + S+GV T + L AD LY++K GR Q++ Sbjct: 385 TISLGVGLWEPGETEDDLLKRADAALYRAKHRGRNQVA 422 >UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n=3 Tax=Zymomonas mobilis RepID=Q5NP17_ZYMMO Length = 1008 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 113/289 (39%), Gaps = 15/289 (5%) Query: 166 SKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVY 225 + + + FS + + + + S +++LP G + FA + + Sbjct: 720 NLLIRFSLLDYGFSRQIHYSYRLLGQDSEWLNLPAGSVPFVIYSHLPAGHFTFALRATIP 779 Query: 226 LRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADV 285 ++ + ++ +I ++ +I+N ++ + Sbjct: 780 GIKQPILETHFPVNVEYRWYEYRFVKIALIIILVLFLYDLISNQIRKLRLMITNKTLELQ 839 Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTFG 339 + + A D+LT + R++F E + + + + D+D FK IND G Sbjct: 840 ETNLRLKELANTDELTGLLNRRAFTEMFEKNCAQFSKTKDQFSVFILDIDFFKKINDNEG 899 Query: 340 HLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI------- 392 HL GD V+ + + + I + R+GG+EF ++ +E + I Sbjct: 900 HLAGDAVIQYIAQKITENIR-QQDFAARYGGEEFVIMLPNADMETTCQVASRIGNAISEK 958 Query: 393 -VHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 V +Q I ++ SIGVA E L ADERLY +K GR ++S Sbjct: 959 PVPYQGREIPVTVSIGVAVMKENDDANSLLERADERLYMAKNQGRNRVS 1007 >UniRef50_A4CF43 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CF43_9GAMM Length = 603 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 70/366 (19%), Positives = 137/366 (37%), Gaps = 46/366 (12%) Query: 113 NYCADIMQVVKYRHVKNTGFIS--------------FDGKTFVYYLYPVTHNRSLIFLLG 158 N+ A+ + + R + + ++ + +L+ G Sbjct: 239 NFLAEHLLELDARFKSLIRIMRITFVVSLLILLSLPWFSYATGLHISLFSTLVNLVICSG 298 Query: 159 LERFSLL-----SKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPT 213 + F L+ SK + + + + ++ + G ++N + + + + + Sbjct: 299 VSGFLLVKKQTYSKWILLSQLSYLVAIIFSIFIFNGKDHNLVSMSTLFMNSFFISSMVLS 358 Query: 214 GLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERV 273 L + + L++ A+++ A ++ + E E + + + Sbjct: 359 YLLILQFIDRRDLKIQRQQ-------ALLAEAKIKDNLQLETIKIQQELEEELESRIQEH 411 Query: 274 LDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFD 327 +K + LD LT R FD+ L + + + D Sbjct: 412 TFELQITLQELEEKNRELEEKNTLDSLTGIRNRSYFDKKLTMEFRRSHREQTPLAVMMLD 471 Query: 328 VDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLS 387 +D FK INDTFGHL GD+ + V +++ + +V R+GG+EFAVI E L Sbjct: 472 IDFFKKINDTFGHLAGDDAIRFVAHTIQTSLKRPSDEVCRYGGEEFAVILPNTDTEGALL 531 Query: 388 ILKEIV--------HFQVGSINLSTSIG----VAHSNECPTVERLKMLADERLYKSKKNG 435 + + I H G IN++ S+G +A N P AD+ LY++K G Sbjct: 532 VAEAIRAQISEAQVHTTAGIINMTISVGLFSDIAQRNHEPNQYTAL--ADKALYQAKHAG 589 Query: 436 RAQISW 441 R Q+ + Sbjct: 590 RNQVVF 595 >UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5K2_HYDS0 Length = 901 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 12/202 (5%) Query: 250 LVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSF 309 ++++ N + IN + E ++ L + + + DDLT R+ Sbjct: 699 IMKQDKNIVLKLNMNRINQNHETLILCILQDITEESMIIKYFEELSIKDDLTGICNRRCL 758 Query: 310 DEDLKA------LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKG 363 ++ L+ + + +FD+D FK+IND++GH +GD+VL + I+ S I Sbjct: 759 EDKLEEYLTLAKRYNRPLSVIMFDIDFFKHINDSYGHDIGDKVLKTIANIVLSNIRA-TD 817 Query: 364 KVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI-----NLSTSIGVAHSNECPTVE 418 + R+GG+EF +I TLE+ ++ +++ + +++ S GV N+ T E Sbjct: 818 ILARYGGEEFVIISPETTLEDAKALAEKLRKEIENFLFEEGFSITCSFGVTSLNQEDTKE 877 Query: 419 RLKMLADERLYKSKKNGRAQIS 440 + DE LYK+K+ GR ++ Sbjct: 878 TILKRVDEALYKAKREGRNRVV 899 >UniRef50_B0CDD6 Diguanylate cyclase (GGDEF domain) n=2 Tax=Bacteria RepID=B0CDD6_ACAM1 Length = 630 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 51/201 (25%), Positives = 79/201 (39%), Gaps = 18/201 (8%) Query: 257 RGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL 316 R + N ++ ++ A + + + +D LT R+SFDE L Sbjct: 428 RERTQALYDRNLQLQQEIEERHRAEAKLKQLNQQLQQLSRIDGLTSIHNRRSFDESLDKE 487 Query: 317 PEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGG 370 + + L DVD FK NDT+GH GD L +V + + V R+GG Sbjct: 488 WRRLRREQQPLSIILCDVDHFKQYNDTYGHQAGDTCLQEVALAIDKSVKRPADMVARYGG 547 Query: 371 DEFAVIYTGGTLEELLSILKEIV----------HFQVGSINLSTSIGVAHSNEC--PTVE 418 +EF V+ L I + I S ++ S+GVA T Sbjct: 548 EEFVVLLPNTPLPGATHIAEMIRTAIEVLRIPHKTSSASDQVTLSLGVATVIPNTQQTYT 607 Query: 419 RLKMLADERLYKSKKNGRAQI 439 L AD LY++K+ GR ++ Sbjct: 608 ELLEAADAALYRAKQQGRNRV 628 >UniRef50_A4G5V3 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5V3_HERAR Length = 519 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 65/346 (18%), Positives = 117/346 (33%), Gaps = 46/346 (13%) Query: 111 EKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLA 170 Y + + + G V + I + +F Sbjct: 191 NMQYFSAYYKDFDIGKAGAIVLTTDSGTLLVRRPFDEAVIGGDISNGPVYQF-------- 242 Query: 171 MDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCT 230 + +G + + I++ ++ + L + + Sbjct: 243 YKRQG------SSGTAILTANIDRTERIYSYRH-LDRYPLLIAVAQSTDEVLESWRNSTM 295 Query: 231 LIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYS 290 FF+A+V ++ LV ++ R + E +G L A Sbjct: 296 RFAFFSAMVLLLLWLLGARLVHQITVRERAQSELRTARDDLERSNGELAALALL------ 349 Query: 291 MYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGD 344 D LT R+ FD L + L + DVD FK ND +GH GD Sbjct: 350 -------DSLTGLANRRRFDAALDDEFARAMRNQTSLALIMLDVDHFKKYNDRYGHPQGD 402 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV---------HF 395 E L ++ KILK+ V R+GG+EF ++ G ++ + + H Sbjct: 403 ECLKEISKILKTATARTGDLVARYGGEEFVILLPGTDRAGAAAVAERVRLAIQALNMEHA 462 Query: 396 QVGSINLSTSIGVAHSNE---CPTVERLKMLADERLYKSKKNGRAQ 438 + ++ S+G+A + ++L AD+ LYK+K++GR Q Sbjct: 463 ETPDGIVTASLGIAALIPQRQQNSPQQLVHAADQALYKAKEDGRNQ 508 >UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales RepID=D0J6R3_COMTE Length = 521 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 110/352 (31%), Gaps = 60/352 (17%) Query: 107 VKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLS 166 + + + Y + + + I DG + + I Sbjct: 189 LIDVQLEYFRKLFSGLSLGENGSLALIRKDGAMMMRQPFDAKVIGRNI------------ 236 Query: 167 KSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYL 226 F F + + + + + + +F LP+ ++ Sbjct: 237 ------RNASTFKRFIAEPEGSFSDTSYLDG----THRLYYFKNLPSLPFI--------- 277 Query: 227 RVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVK 286 + V S ++ R I ++ F + + + Sbjct: 278 ------------IMVAKAHSDIFTAWRKRALIIACLMGVLTAAFIGLSFAFVTQLQRRIH 325 Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGH 340 + A D LT R+ DE L + L D+D+FK NDT+GH Sbjct: 326 AESELALLARTDGLTGLNNRRRLDEMLDQEWHRARRNHSIFSLLFVDIDRFKVYNDTYGH 385 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV------- 393 GD+V+ + + + I R+GG+EF V+ +LE + + I Sbjct: 386 QAGDDVIATIAQCIGDNIRRPGDIAARYGGEEFIVVLPDTSLEGASCLAESIRAAVSQLS 445 Query: 394 --HFQVGSINLSTSIGVAHSNECPTVE--RLKMLADERLYKSKKNGRAQISW 441 H ++ SIG A + + ADE LYK+K GR ++ Sbjct: 446 VEHSGSEFGYITVSIGCAAWEPEHDADVASVIRSADEALYKAKTTGRNKVVV 497 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 19/222 (8%) Query: 235 FAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNS 294 + + +++ L L+ + ++ R + + + A+++ + N Sbjct: 783 VSLCLPMMAQGETLGLLY--LYSDSPDQLCESKRQLARTVAEQMALAIANLQLREELQNR 840 Query: 295 AFLDDLTKAMGRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLM 348 + D LT R+ +E L+ + + + D+D FK NDTFGH GD VL Sbjct: 841 SIRDPLTGLFNRRYLEESLEREINRACRNDHNVGVIMIDIDHFKRFNDTFGHDGGDAVLK 900 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV---------HFQVGS 399 +V K+LKS + R+GG+E +I ++E +++ H + Sbjct: 901 EVGKLLKSSLRA-SDIACRYGGEEMTLILPEASIENTYKRAEQVRKLIKQINIEHKRQSL 959 Query: 400 INLSTSIGVAH-SNECPTVERLKMLADERLYKSKKNGRAQIS 440 ++ S+GVA T + + AD LY++KK GR ++ Sbjct: 960 GTITASLGVACFPEHGMTGDAVVQRADTALYQAKKEGRDRVV 1001 >UniRef50_A4VQF4 GGDEF domain protein n=3 Tax=Proteobacteria RepID=A4VQF4_PSEU5 Length = 466 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 12/183 (6%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYL 323 F +L LF+ + + + D LT R + D + + Sbjct: 277 FSAMLLTSLFWIRRLRRLNDQLRIKSQTDSLTGLANRAALDRRFATALEQARRYRRPLSI 336 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 + D+D FK IND FGH +GD VL +L + V R+GG+EF V+ + Sbjct: 337 VMLDIDHFKRINDDFGHQMGDRVLRDFAALLDDCLR-GSDAVGRWGGEEFLVLCPETSGP 395 Query: 384 ELLSILKEIVHFQ-----VGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 + + + + ++ + S GVA + T + L AD LY++K GR + Sbjct: 396 QAVQFAERLCEQARAFPFATGVSQTLSAGVAELSPSDTPDSLLRRADAALYRAKHEGRDR 455 Query: 439 ISW 441 + W Sbjct: 456 VCW 458 >UniRef50_B5VVN4 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Arthrospira RepID=B5VVN4_SPIMA Length = 652 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 19/198 (9%) Query: 260 VEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK 319 +E I + G + + A LD LT R+ FD LK ++ Sbjct: 449 IEALRSIATPIAVAIQQGELHA-KLQTVNQELERLASLDGLTGVANRRQFDLHLKREWQR 507 Query: 320 ------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEF 373 + + DVD FK NDT+GH +GDE L ++ KIL++ R+GG+EF Sbjct: 508 LLRETAPISVIMCDVDFFKAYNDTYGHQMGDECLKQIAKILENCAQRSTDLASRYGGEEF 567 Query: 374 AVIYTGGTLEELLSILKEI--------VHFQVGSIN--LSTSIGVAH--SNECPTVERLK 421 ++ ++ L + +I + Q ++ ++ S+GVA N + E L Sbjct: 568 VIVLPNTGIKGALQVADKIQHQIRALEIEHQKSEVSGYVTLSLGVACQVPNHDRSPESLI 627 Query: 422 MLADERLYKSKKNGRAQI 439 LAD LY++K GR I Sbjct: 628 KLADAALYEAKSKGRNCI 645 >UniRef50_B1HWA5 Putative diguanylate cyclase (GGDEF domain) n=2 Tax=Bacillaceae RepID=B1HWA5_LYSSC Length = 325 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 71/295 (24%), Positives = 114/295 (38%), Gaps = 14/295 (4%) Query: 158 GLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYV 217 L ++ + + + N Y A N V E H + Sbjct: 27 TLLKWIGFEQVDLLQQHLEILLSTPNKLIFHSYFYPAINLEQQVEELFIHLKHKEGMAIP 86 Query: 218 FAYKKDVYLRVCTLII--FFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLD 275 F +Y I + I L ++++ EKE + N E++ Sbjct: 87 FLMNARLYTEDTVERIDCILVKMQKRIDYEQELRSAKKLLEAAYQEKEQALAN-LEQIYV 145 Query: 276 GGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVD 329 A + S+ + D LT R+ F E L+ K LC+ D+D Sbjct: 146 EIEQQQAKLLTVNASLVELSETDKLTGLKNRRFFQEKLEQQLNSYYESAKPFSLCILDID 205 Query: 330 KFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSIL 389 FK +NDTFGH +GD+VL ++ ++L + + V R+GG+EF +I + I Sbjct: 206 HFKKVNDTFGHQVGDDVLAQLAQLLTQRARKE-DTVVRYGGEEFVMILPETEIAAAKEIG 264 Query: 390 KEIVHF----QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 ++I ++ SIG+A T L AD+ LY SKKNGR Q++ Sbjct: 265 EQIRKTVALDHWPVGQVTISIGLATVTSKDTGTTLLKNADDALYASKKNGRNQVT 319 >UniRef50_A8UV88 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UV88_9AQUI Length = 475 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 104/266 (39%), Gaps = 16/266 (6%) Query: 190 DEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLY 249 K+ +FT + + L L + L ++ A S + Sbjct: 201 FSQILKDTLFTSVIFLVYTLILVVVLSSILFVLFNRLVRDITMLKNMAYKFKELDFSDIP 260 Query: 250 LVRRVINRGIVEKEAI-INNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKS 308 + + + E + + + + KK A+ D LT R+ Sbjct: 261 KLSEQVRKDRTRDELFTLKSSVLNMAQELEAYIKELEKKKEKFEELAYTDPLTGLNNRRF 320 Query: 309 FDE------DLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDK 362 F E DL + L + D+D FK+IND +GH +GD VL K+ ++++ + Sbjct: 321 FMENARTIIDLSKRYREPLSLLMMDIDNFKSINDNYGHDVGDLVLKKLAEVIRKNVRT-S 379 Query: 363 GKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNEC 414 RFGG+EF V+ + L + + I I S SIG++ +E Sbjct: 380 DIPARFGGEEFVVLLPRTDEKGALMVAERIRNEFRNSSVKVDGKDIWTSVSIGLSVLSEE 439 Query: 415 PTVERLKMLADERLYKSKKNGRAQIS 440 ++ L ADE LY++K++G+ ++ Sbjct: 440 DDIDSLIKKADEALYQAKRSGKDRVV 465 >UniRef50_A1S9W6 Putative diguanylate cyclase (GGDEF domain protein) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9W6_SHEAM Length = 557 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 120/318 (37%), Gaps = 27/318 (8%) Query: 143 YLYP----VTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAI 198 + +P + L+F L L L+ L + + I Sbjct: 243 WSHPMLMTLYCVSGLMFALRFLGIDKLRPHLSYIVLGLAVLMMTVQGVAMTTDDRELGLI 302 Query: 199 FTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRR--VIN 256 F F Y+ T L + T +F A ++ + G+ L + Sbjct: 303 FAF-----DFVYIFTLLMPLLGILAWLHGLPTARLFLLASLSTMVGSCTTGLAVEGYISF 357 Query: 257 RGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSM--YNSAFLDDLTKAMGRKSFDEDLK 314 + A I + +L + + + A D LT R++F E L+ Sbjct: 358 NQWTYRAAEIGMFIDAMLLALALAAQFRQSEQERVLAQQLAATDPLTGIANRRAFSEQLQ 417 Query: 315 ALP-----EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFG 369 L + L + D+D+FK+INDT GH +GD+VL + ++++ I ++ + R+G Sbjct: 418 RLWHLDSQRRCRALIMIDIDRFKSINDTLGHEVGDKVLTDIARVIRYSIR-NRDQCGRWG 476 Query: 370 GDEFAVIYTGGTLEELLSILKEIVH--------FQVGSINLSTSIGVAHSNECPTVERLK 421 G+EF V+ + EE I + I H + ++ S+GV E + Sbjct: 477 GEEFVVLLASASEEEAGIIAERIRHNIESLSFPAPANKLKVTASVGVCLDEGHSRHEDIL 536 Query: 422 MLADERLYKSKKNGRAQI 439 ADE +Y +K G ++ Sbjct: 537 RRADEAMYHAKDAGGNRV 554 >UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7F5_MAGSM Length = 320 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 18/193 (9%) Query: 266 INNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------ 319 + N + + ++ + A +D LT R+ FDE ++ + Sbjct: 127 LLNILSKRMRNNNRVIIEGSERQRKLETFAKVDPLTGIYNRRWFDESMQRQMRRVEHSQN 186 Query: 320 GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTG 379 L + DVD FK NDT GH GDE L+ + + + R+GG+EFAV+ Sbjct: 187 PLSLIMLDVDHFKRYNDTHGHQGGDEALIALAHTISLHLR-PGDIAARYGGEEFAVVLPD 245 Query: 380 GTLEELLSILKEIVHF---------QVGSIN-LSTSIGVAHSNEC-PTVERLKMLADERL 428 I + + + S++ ++ S+GVA ++ +V L AD L Sbjct: 246 TDAVSGRMIAERLRTAVEALEIKDDEGNSLSGITISLGVAQTSGTVDSVSELIATADAAL 305 Query: 429 YKSKKNGRAQISW 441 Y++K GR ++ Sbjct: 306 YQAKNQGRNRVVV 318 >UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSY0_9GAMM Length = 261 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 14/183 (7%) Query: 273 VLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLF 326 ++ + + ++ + A D LT R+ F + ++ L + Sbjct: 63 LVHNLIKSNIKLLRVQKQLEELANKDALTGLYNRQYFFDHANEWDKRCRENSGHFSLLML 122 Query: 327 DVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELL 386 DVD FK+IND FGH +GD VL +V ++K + + R+GG+EF + Sbjct: 123 DVDHFKSINDRFGHPVGDRVLQRVSNVIKGFMRQE-DMCARYGGEEFICLLPDTNAAGAK 181 Query: 387 SILKEIV-------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ + I + ++LS SIG + +E L AD+ LY++K GR + Sbjct: 182 AVAERIRLGMEHQAFLKARGLSLSVSIGATTMSANDNLETLIERADQALYEAKDGGRNRA 241 Query: 440 SWQ 442 ++ Sbjct: 242 VFK 244 >UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VMP7_9CYAN Length = 505 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 92/238 (38%), Gaps = 22/238 (9%) Query: 219 AYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGL 278 D+ V I+F ++A++ + R + + + L + Sbjct: 255 GLNLDLNTGVGVPILFRDRVLAIL----VFFKQARSESEPRLIDFIQLIAAQLGTLMQRI 310 Query: 279 FFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFK 332 A + + +D LT R+ FD+ + ++ L L D+D FK Sbjct: 311 KVETALFEANQKLKYLVTIDGLTGIANRRKFDQYIHREWQRLFREQLPLSLILGDIDFFK 370 Query: 333 NINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI 392 NDT+GH GD+ L V ++ + V R+GG+EFAVI + + + + I Sbjct: 371 RYNDTYGHQAGDDCLRNVATKIRLLVKRPADLVARYGGEEFAVILPNTNAKGAIHVAETI 430 Query: 393 VH----------FQVGSINLSTSIGVAHSNECP--TVERLKMLADERLYKSKKNGRAQ 438 S ++ S+GV+ VE L AD+ LY++K GR Q Sbjct: 431 RQGVETLKIPHGGSESSKYVTLSLGVSSLIPNSLVNVEGLINQADQALYRAKAGGRNQ 488 >UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCX8_9BURK Length = 600 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 65/330 (19%), Positives = 119/330 (36%), Gaps = 29/330 (8%) Query: 129 NTGFISFDGKTFVYY-LYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPV 187 + ++ + PV +L+FLL + + + A F ++G Sbjct: 275 ALAAVHLLAPLVYWFAITPVARYATLLFLLTVLAVTAVGAWCA-------FLRMRSGYYF 327 Query: 188 TGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASC 247 G A+ ++ F +LPT + + + L++ FA Sbjct: 328 LGA--FGMLAVGSLVTTARSFGWLPTNAFTV-NGFQLGSNLEMLLLAFALADRFNQMRRE 384 Query: 248 LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRK 307 ++ +R + + + + + + + + +D LT R+ Sbjct: 385 KHMAQRELVSTQQQLVETLRASEQELAQRVEERTRQLQVANERLEALSMVDGLTGIANRR 444 Query: 308 SFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVD 361 FD+ L + L + DVD FK ND FGH GDE L V + + Sbjct: 445 HFDQVLHKEWTRLERAGQPLALVMLDVDWFKRYNDHFGHQAGDECLRAVAQAISGVSRA- 503 Query: 362 KGKVYRFGGDEFAVIYTGGTLEELLSILKE----IV-----HFQVGSINLSTSIGVA--H 410 V R+GG+EF +I G + L + + + H ++ S GVA Sbjct: 504 SDLVARYGGEEFVIIAPGTDGPQALQMAQRACDAVRALGMPHPLAYEAVVTVSCGVAVTV 563 Query: 411 SNECPTVERLKMLADERLYKSKKNGRAQIS 440 ++E L AD+ LY++K GR ++ Sbjct: 564 PGPDDSLENLLGQADDALYEAKAQGRNRVV 593 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 17/185 (9%) Query: 272 RVLDGGLFFSAADVKKLY-SMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLC 324 R + K ++ A D LT R+ F E + + + Sbjct: 866 RWYAVATIRDITERKATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTML 925 Query: 325 LFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEE 384 + D+D FK +NDT GH +GDEVL ++ +I ++ + + + R GG+EF V+ Sbjct: 926 MMDIDHFKRVNDTHGHGVGDEVLRELARISRTALR-ELDILGRLGGEEFGVLLPETDAGP 984 Query: 385 LLSILKEIVHF--------QVGSINLSTSIGVAHS-NECPTVERLKMLADERLYKSKKNG 435 + + + + G++ ++ SIG A S N+ TVE L AD LY++K++G Sbjct: 985 AMEVAQRLRRAIEKASMATDAGTLRITVSIGAATSNNDAETVETLLKRADVALYEAKQSG 1044 Query: 436 RAQIS 440 R ++ Sbjct: 1045 RNKVV 1049 >UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A0L4D8_MAGSM Length = 464 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 19/219 (8%) Query: 239 VAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLD 298 + + + R + A + + LD L + D Sbjct: 232 LGDLESLRGALVTEAEALRSQTQSLATSLSESQAQLDLTRKQLQQVQDDLKKAKEESLTD 291 Query: 299 DLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 LT+ R++ + L + L + D+D FK INDT+GH +GD VL +V Sbjct: 292 PLTQVANRRALFQSLTRETARTRRYGEPLSLIIIDLDHFKKINDTYGHPVGDRVLKEVAG 351 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLST 404 ++ + D + R+GG+EF + TL + + ++I + S+++S Sbjct: 352 HARALLR-DSDTLARYGGEEFVALLPETTLPQAMEKAEQIRLSVAAMRFKLKGESLSISA 410 Query: 405 SIGVAHSNECPTV----ERLKMLADERLYKSKKNGRAQI 439 S+GVA ++ + E AD+ LY++K GR + Sbjct: 411 SLGVAQLDDGASQDANNEAFVHRADQALYRAKSGGRNCV 449 >UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8F5_ACIDE Length = 1152 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 17/175 (9%) Query: 281 SAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY------LCLFDVDKFKNI 334 + ++ A D LT R++F L+ + L + D+D FK + Sbjct: 967 VTERRRHEQTLERLATTDALTGLANRRAFMARLEEERMRPSMGGRGGMLIMLDLDHFKRV 1026 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH 394 NDT+GH GDEVL+ + ++L+ + R GG+EFAV+ T EE L + + + Sbjct: 1027 NDTWGHAAGDEVLVHLARLLRGDLLRATDLAGRLGGEEFAVLLPDTTAEEALGVAERLRR 1086 Query: 395 F---------QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 ++ ++ S+GVA + + AD LY++K GR ++ Sbjct: 1087 ALEQSKIHVGDGATLQVTMSLGVA-PITGDAL-AVLAHADIALYEAKNTGRNKVV 1139 >UniRef50_A6W0K6 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0K6_MARMS Length = 556 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 66/309 (21%), Positives = 124/309 (40%), Gaps = 31/309 (10%) Query: 145 YPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEA 204 P + + + ++ +S + L F +F + A + Sbjct: 263 SPESTDLAWQIVVRQPLSIAMSAVNEVHKLLLFFGVFATLLCMLLAYQFAGTLSRPLERL 322 Query: 205 MEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEA 264 + G ++ D +I AS ++ +++ + +++ Sbjct: 323 ALTAKSIQQGDRKVTFQSDS---------------KLIEVASLSRSLQEMMSSLLTREQS 367 Query: 265 IINNHFERVLDGGLFFSAADVKK-LYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK---- 319 ++ + +L+ + A+++ S+ A D LT R + DE L + Sbjct: 368 LMQMNV--MLETKVKNRTAELEASNRSLEAIARKDPLTHIYNRLALDEALHKEYRQAQES 425 Query: 320 --GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIY 377 + + D D FK +ND+FGH +GD VL K+ K+L Q+ DKG V RFGG+EF V+ Sbjct: 426 KCPFAVIMIDADHFKRVNDSFGHTVGDLVLQKIAKLLTVQV-GDKGIVARFGGEEFTVLL 484 Query: 378 TGGTLEELLSILKEIVHFQVGS-----INLSTSIGVAHSNECPT-VERLKMLADERLYKS 431 +E +I + I + ++ S GVA + E++ AD LYK+ Sbjct: 485 PNMNADEAKNIAEMIREALEKEEMSDGLYVTASFGVAMYEIDDSHYEQVLNRADAALYKA 544 Query: 432 KKNGRAQIS 440 K+ GR ++ Sbjct: 545 KEQGRNRVV 553 >UniRef50_B8E8E4 Diguanylate cyclase n=3 Tax=Shewanella baltica RepID=B8E8E4_SHEB2 Length = 385 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 72/342 (21%), Positives = 130/342 (38%), Gaps = 28/342 (8%) Query: 106 QVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLL 165 + F + Y ++ V+ Y T F SF F L L+ + Sbjct: 55 NLLLFSRPYLPPVVAVIFYNFCVTTAF-SFSYLAFAR-LVGKQAPLWLVLFPIFVMILTM 112 Query: 166 SKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVY 225 S + + ++F+ G + + ++ SE ++ + TGL+ + Sbjct: 113 SIYIDDIAMRVIFASIITGTQLILMAFILTRGNWSGSEKLKGWLMYSTGLFGVGF----- 167 Query: 226 LRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADV 285 +V + L ++ + + +I + + Sbjct: 168 ------------IVRALFCYVKPELFIHLVAKSSFQSGLVIAGMIYIIFSTVVILLVRLD 215 Query: 286 KKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK---GGYLCLFDVDKFKNINDTFGHLL 342 + + A D LT R++F + ++ + + D+D FK IND GH + Sbjct: 216 RLNKELSTLASQDSLTGLFNRRAFMHNATSIIASENFPVSVLMLDLDNFKKINDVHGHNV 275 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQV----- 397 GD VL L+ + G + RFGG+EFA I E+ L + +++ Sbjct: 276 GDTVLKLCADALQDGL-KQYGIIGRFGGEEFAAILPRADSEQALVVSEKLRLAIETINVN 334 Query: 398 GSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 I LS SIGVA S+ ++E L + AD+ LY++K GR Q+ Sbjct: 335 PDIRLSISIGVATSSSVSSIEPLLIRADKALYEAKSKGRNQV 376 >UniRef50_B7KF34 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KF34_CYAP7 Length = 620 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 67/250 (26%), Positives = 113/250 (45%), Gaps = 22/250 (8%) Query: 214 GLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYL-VRRVINRGIVEKEAIINNHFER 272 + ++ + +L+I+ + L ++ A Y + + ++E+ A + R Sbjct: 371 YRWQIIAIAVSFIGLISLVIYLSGLNRKLNHARLAYSELNASLETKVIERTAELKEVNSR 430 Query: 273 VLDGGLFFSAADVKKLY---SMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYL 323 + + S A+ +K + + +D+LT R+SFD LK + L Sbjct: 431 LEAEIIERSQAEAEKERLIAKLNRLSHIDNLTSLANRRSFDLYLKQEWNRHYRTQLPLSL 490 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 L D+D FK +NDT+GH GDE L +V K+LK R+GG+EFA+I LE Sbjct: 491 ILCDIDYFKKLNDTYGHQAGDECLKRVAKVLKKHTKRSSDLAARYGGEEFAIILPETDLE 550 Query: 384 ELLSILKEIV-HFQVGSINLSTS---------IGVAH--SNECPTVERLKMLADERLYKS 431 + + + I + + I S S GVA + +++ L LAD+ LY+ Sbjct: 551 GAIFLAESIKDNIKSLRIPNSASLVKPFVSMTFGVATMVPTQHQSLDILISLADQALYRG 610 Query: 432 KKNGRAQISW 441 K NGR Q+S Sbjct: 611 KNNGRDQVSV 620 >UniRef50_Q60BH3 GGDEF domain protein n=1 Tax=Methylococcus capsulatus RepID=Q60BH3_METCA Length = 385 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 123/339 (36%), Gaps = 25/339 (7%) Query: 127 VKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENL------MFSL 180 N ++ V + +L L F + + +F+ Sbjct: 47 GMNFALFVLTARSLVPEPVALGGAVTLGIGGTLLVFVAVQELRERVYSKFALLGVFVFAA 106 Query: 181 FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA 240 N + + ++ +V A F L RV + ++V Sbjct: 107 VANAYTLHAGHDGLRISVNSVLAAAVFFMIAHALLRPDPPSGRSIYRVTGFLALAISMVL 166 Query: 241 VISGASCLYL---VRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFL 297 I S L L + ++ V++ VL F + ++ A Sbjct: 167 AIRAVSPLILDSPIVHPMDENWVQQLTYSAILVGNVLGSLCFGLIVAEELNAELHQLASF 226 Query: 298 DDLTKAMGRKSF-----DEDLKALPEK-GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LT+ R+ F DE L+A ++ L + D+D FK +ND GH GD L++V Sbjct: 227 DSLTRIYNRRVFENLATDELLRARTKRVPVSLLMIDIDHFKQVNDRHGHAAGDAALVRVA 286 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLS 403 + ++ + + + R+GG+EF V+ + L I + + + +I L+ Sbjct: 287 ETMEESLR-HRDLLCRYGGEEFGVLLPATARAQALRIAERLRLATMHAGFLYGGEAIPLT 345 Query: 404 TSIGVAHSNECPTVERLKML-ADERLYKSKKNGRAQISW 441 SIGVA P L AD LY +K+ GR +++ Sbjct: 346 VSIGVACIEGPPYDLSLLKHDADRALYVAKQAGRNRVAV 384 >UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQK2_CHRVO Length = 585 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 13/197 (6%) Query: 256 NRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA 315 R + + A + + + V+K + A D LT R + +E L+ Sbjct: 384 ERQLADVNANLEQMVADRTEQLRESNRLLVQKAAQLAQLARNDALTGLHNRMAANEQLQE 443 Query: 316 LPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFG 369 + + L DVD FK +NDT GH GD VL + IL+ V RFG Sbjct: 444 EHLRHGRSGAPYAVLLLDVDHFKRVNDTHGHDAGDRVLRHIADILRRAARA-TDFVARFG 502 Query: 370 GDEFAVIYTGGTLEELLSILKEIVHFQVGS-----INLSTSIGVAHSNECPT-VERLKML 423 G+EF ++ + + ++I S ++ SIG+A + E Sbjct: 503 GEEFLLLLPETDADGAAVLAEKIRASVEQSQAPDVGRVTLSIGLATVVPADSQPEMAVKR 562 Query: 424 ADERLYKSKKNGRAQIS 440 AD+ LY++K GR ++ Sbjct: 563 ADQALYRAKAAGRNRVE 579 >UniRef50_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5G2_ACIC5 Length = 369 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 17/209 (8%) Query: 247 CLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVK-KLYS----MYNSAFLDDLT 301 L ++ R + + ++ R + + +L + D LT Sbjct: 145 ALRVLARQVAAQFQMRRQLLELREARAKQAKTEQRLRESQTRLKEANACLQEMVTTDALT 204 Query: 302 KAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILK 355 R++FDE L+ + L + DVD FK +NDT GH GD+VL V + L+ Sbjct: 205 GVKNRRAFDEGLQQAWKMSARTKSPLSLLMVDVDHFKRVNDTLGHEAGDDVLRLVAQTLQ 264 Query: 356 SQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV----HFQVGSINLSTSIGV-AH 410 V R+GG+EF V+ G E ++ +++ + L+ SIGV + Sbjct: 265 FMTRS-TDMVARYGGEEFVVVLPGTEAEPAVAFAEQLRLNIANLSWRGHPLTVSIGVDSG 323 Query: 411 SNECPTVERLKMLADERLYKSKKNGRAQI 439 S T L AD LY++K +GR ++ Sbjct: 324 SGSGKTECELVAHADAALYRAKNSGRNRV 352 >UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV3_9DELT Length = 519 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 20/188 (10%) Query: 265 IINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL------PE 318 II HF ++L+ + L A D LT R+ F E L Sbjct: 328 IIARHFNKLLEVV-------ERLLREKDQLAGTDQLTGLNNRRRFKELLDQELIRYRRIP 380 Query: 319 KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT 378 K L +FD+D FK +NDT+GH GD VL ++ ++L++ + R+GG+EF V+ Sbjct: 381 KPLSLLIFDIDHFKRVNDTYGHETGDLVLKEMAQLLQATVRR-TDTPARWGGEEFLVLLP 439 Query: 379 GGTLEELLSILKEIVHFQVGS-----INLSTSIGVAHSNECPTVER-LKMLADERLYKSK 432 T E +++ +++ ++ S GVA ++ E L D+ LY++K Sbjct: 440 ATTAEAAMALAEKLRQAIEEHDFPRVGRVTASFGVAAFHDGEQEESALLRRVDKALYQAK 499 Query: 433 KNGRAQIS 440 + GR ++ Sbjct: 500 RQGRNRVV 507 >UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HRM0_AZOC5 Length = 514 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 92/247 (37%), Gaps = 16/247 (6%) Query: 209 AYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINN 268 + P L K+ Y + A I + R ++ V + Sbjct: 247 VHAPVTLSYGDGKRTFYAAPVPQLPLVVATGQSIRDIFLPWRYRVLVGTAAVLTVGFASI 306 Query: 269 HFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGY 322 VL L + + + DDLT R+ F + ++ Sbjct: 307 AIALVLRHDL---MRRSRLQAELLQLSLTDDLTGIANRRRFFDVAIREWQRAQRLGSPVA 363 Query: 323 LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL 382 + + D+D+FK +ND GH GD VL + ++++ + R+GG+EF I + Sbjct: 364 VLMIDIDRFKLLNDRLGHAAGDAVLQAIAQLIRHSLRRPADLAARYGGEEFTAILPDTDM 423 Query: 383 EELLSILKEIVHFQVGSI-----NLSTSIGVAH--SNECPTVERLKMLADERLYKSKKNG 435 + I + ++ SIG+A ++ T E + AD LY++K++G Sbjct: 424 AGAFQTAERIRTQVERDVIRGDHPVTVSIGIAAAIASPNETFENVVAAADRALYRAKESG 483 Query: 436 RAQISWQ 442 R ++ + Sbjct: 484 RNRVMVE 490 >UniRef50_Q2SK89 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SK89_HAHCH Length = 528 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 67/277 (24%), Positives = 114/277 (41%), Gaps = 22/277 (7%) Query: 184 GKPVTGDEYNAKNAIFTVSEAMEHFAY-LPTGLYVFAYKKDVYLRVCTLIIFFAALVAVI 242 G + D + + + ++ + F T +Y + V + F ++ + Sbjct: 229 GYTLIPDIESDLSILVRINADRDFFNLTAATFDRAMSYASYLLTAVLGIFAFLVLMLVLR 288 Query: 243 SGASCLYLVRRVINRGIVEKE---AIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDD 299 A VRRV ++ +EK + + ++ ++ + +F D+ Sbjct: 289 PLARLEAYVRRVQSQPQLEKLDLPKLPRDEIGKLGRAFYQLLCQLQEQSEKLREMSFRDE 348 Query: 300 LTKAMGRK----SFDED--LKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKI 353 LT R+ DE L + + + DVD FK+ ND +GH +GDEVL +V Sbjct: 349 LTGLANRRAVIGYLDERWRLALEQKSDIAIIICDVDYFKDFNDHYGHDMGDEVLKEVASA 408 Query: 354 LKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV----------HFQVGSINLS 403 L+ V R+GG+EF ++ G L + + +V HF + +S Sbjct: 409 LRRGANKRLDLVARYGGEEFLIVLPGADLHIGEQVAERLVKRVYEMKLPHHFSQIAQYVS 468 Query: 404 TSIGVA--HSNECPTVERLKMLADERLYKSKKNGRAQ 438 S GVA E T E LADE LYK+K++GR + Sbjct: 469 VSCGVAAGSPGEDETKEEWIRLADEALYKAKESGRNR 505 >UniRef50_Q4KF29 GGDEF domain protein n=2 Tax=Pseudomonas fluorescens RepID=Q4KF29_PSEF5 Length = 523 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 101/342 (29%), Gaps = 52/342 (15%) Query: 114 YCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDS 173 Y DG + L R + SK L + Sbjct: 199 YFDQFFTSFNIDEQGAMFLALSDGTLIARRPFEERQ-----IGASLARGEIFSKYLPEAT 253 Query: 174 ENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLII 233 Y A V A + G Y AY+ + + L + Sbjct: 254 TGNAMITSIVDGVTRLYGYRQLQAYPLVVAAANSKDSVLKGWYASAYQSTAIVALVLLGV 313 Query: 234 FFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYN 293 V F + + A + ++ Sbjct: 314 GLFGWV------------------------------FVQQVRNNERIEADLREAQEALEV 343 Query: 294 SAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVL 347 A D LT R+ F+ L + L + D+D FK NDT+GH+ GD L Sbjct: 344 IATHDSLTGLANRRLFERALTVEFGRGARQRSPLSLVMVDIDYFKRYNDTYGHVAGDHCL 403 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS-------- 399 +V + LK R+GG+EFAV+ + L++ ++I + Sbjct: 404 TEVAQALKGCCQRKADLAVRYGGEEFAVLLPDTDIHGALAMAEQIRRSVMQRNIAHSGSP 463 Query: 400 -INLSTSIGVAHSNEC--PTVERLKMLADERLYKSKKNGRAQ 438 ++ S+G ++E AD LY++K GR + Sbjct: 464 VGCVTVSLGCYAFVPTGRDSIEMFIERADAALYQAKATGRNR 505 >UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9C4_9DELT Length = 498 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 57/218 (26%), Positives = 86/218 (39%), Gaps = 19/218 (8%) Query: 239 VAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLD 298 + + + + + + V GL A + K + A D Sbjct: 271 MPLTAAHETFGCLVLLCEPDYRLGRDQVETFRSAVNHLGLALRNALIFKEVKLR--ADRD 328 Query: 299 DLTKAMGRKSFDEDL------KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 LT+ R SFDE L + L + D+D FK +NDT+GH GD VL KV + Sbjct: 329 GLTRIYNRHSFDERLIYEIKRRRRYNHDLSLLMVDLDHFKQVNDTYGHKAGDMVLRKVGE 388 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLST 404 IL R+GG+EF V+ + E + + I F +++ Sbjct: 389 ILTETFRT-TDLAARYGGEEFVVLLPHTSEEAAWKLAERIRESIQGCVFRFDGHEFSVTA 447 Query: 405 SIGVAHSNEC--PTVERLKMLADERLYKSKKNGRAQIS 440 SIGVA + L + AD+ LYK+K NGR + Sbjct: 448 SIGVASVEAGALTRDDDLLIKADKALYKAKNNGRNMVV 485 >UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM57_9PROT Length = 461 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 16/182 (8%) Query: 274 LDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFD 327 + G + + + A D LT R++F + E+ + + D Sbjct: 276 VTGVMVDVTESHRLRQELERLATTDPLTGLSNRRAFLMRAREEVERAVRHDRPMSVVMID 335 Query: 328 VDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLS 387 VD FK++ND +GH +GD VL V ++ + RFGG+EF ++ T+ Sbjct: 336 VDHFKSVNDRYGHDIGDLVLQDVAATVQGALRNSGDVAARFGGEEFVLLLPETTVSGAQQ 395 Query: 388 ILKEIV--------HFQVGSINLSTSIGVAHSNECPT--VERLKMLADERLYKSKKNGRA 437 + + I + G++ + S GV ++ + AD+ LY++K+ GR Sbjct: 396 LAERIRVAFERTAVETEQGAVRFTASFGVDVFRSDMDTGIDTVLKRADDALYRAKEAGRN 455 Query: 438 QI 439 ++ Sbjct: 456 RV 457 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 15/166 (9%) Query: 289 YSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLL 342 + + A +D LT R+ D L+ E+ + + D+D FK INDT GH+ Sbjct: 133 HKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIMMLDIDHFKEINDTHGHIC 192 Query: 343 GDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI-- 400 GD L K+ ++L + + R+GG+EF I + E+ L + + S Sbjct: 193 GDYTLRKISELLLELVRT-SDILGRYGGEEFCCILPETSFEQALVLAERCRTQVAASQFS 251 Query: 401 ------NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 ++ SIGV + T++ + AD+ LY++K+ GR ++ Sbjct: 252 CTDHQSRVTVSIGVTDLHRDDTLDSIIKRADDALYQAKRTGRNRVC 297 >UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21R75_RHOFD Length = 498 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 65/318 (20%), Positives = 115/318 (36%), Gaps = 34/318 (10%) Query: 156 LLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEH------FA 209 + R + + S+ + +NL+ F G + E+ + + + + + Sbjct: 31 HVQYWRAARAADSVKTELDNLLIDSFLLGLFMAALEFPLWLSFAAIMATLTNNAANKGWP 90 Query: 210 YLPTGLYVFAYKKDVYLRV----------CTLIIFFAALVAVISGASCLYLVRRVINRGI 259 +P + +++ V L IF + +R + Sbjct: 91 SVPKNVLAMLAGALIWVTVRGFKFSPDTGWPLTIFCMVGICGYVLVIGNVGFQRNLQLRR 150 Query: 260 VEKEAIINNHFERVLDGGLFFSAADVKKLYS-MYNSAFLDDLTKAMGRKSFDEDLKALPE 318 V +E + L + +++ L + A D LT R+ D L Sbjct: 151 VREELRTREQELLKANQSLVVNLQEIEALQQQLREQASRDSLTALYNRRYLDTTLDRELA 210 Query: 319 ------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDE 372 K L + DVD FK ND GH GD+ L+ V K L++ R+GG+E Sbjct: 211 SCKREGKPLSLIMIDVDDFKKYNDLHGHQAGDQCLIAVAKTLQASAKRASDLAARYGGEE 270 Query: 373 FAVIYTGGTLEELLSILKEIV---------HFQVGSINLSTSIGVA--HSNECPTVERLK 421 F ++ G + +E+ H Q +++ SIG+A ++ V L Sbjct: 271 FLLVLPGMDATAAQGLAEELRRSVEALKIPHEQSRGGSVTISIGLAVMTNDSHKDVAGLL 330 Query: 422 MLADERLYKSKKNGRAQI 439 ADE LY +K GR Q+ Sbjct: 331 RAADEALYHAKHGGRNQV 348 >UniRef50_Q4ZZT3 GGDEF n=5 Tax=Pseudomonas syringae group RepID=Q4ZZT3_PSEU2 Length = 690 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 15/185 (8%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYL 323 + + L A +D LT R ++ E L+ + + Sbjct: 505 LAARVASMEQEALGFRTHLEEQRQKALIDPLTGLPNRAAWGERLEREMARWHEEKNSLLV 564 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 C+ D+D FK IND +GHL GD+VL V +L ++ D + RFGG+EF ++ Sbjct: 565 CILDLDHFKRINDGYGHLAGDKVLKIVANVLSKRLRAD-DFMARFGGEEFVMLLPATPPA 623 Query: 384 ELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNG 435 L +L E+ HF+ + ++ SIG+ + AD+ LYK+K+NG Sbjct: 624 TGLKLLDELRAAVESCPFHFKGERVTITVSIGMTAFRPSERSDTAIKRADQALYKAKENG 683 Query: 436 RAQIS 440 R +I Sbjct: 684 RNRIE 688 >UniRef50_A3WLL9 Signaling protein with a acyltransferase and GGDEF domains n=2 Tax=Idiomarina RepID=A3WLL9_9GAMM Length = 594 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 130/335 (38%), Gaps = 28/335 (8%) Query: 126 HVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGK 185 +KN G + L V+ + +LL+ ++ L+ ++ K Sbjct: 262 RLKNYRQTLARGLFIMAGLALVSLAVGAFSSYKVGIHALLALAVPGCLYLLIIGVYLWKK 321 Query: 186 PVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGA 245 + +FT++ + + L ++++ I + + ++ + Sbjct: 322 GLIYAR------MFTIAWGALLLSVMVNSLGYLGIIDSMFIQ--RHAIMLGSGLEILLLS 373 Query: 246 SCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYS----MYNSAFLDDLT 301 L + R + + N E ++ F +++L + D LT Sbjct: 374 WVLAVRYNEQRRERLIAQQRYNEELETRVEERTFELEITLRELQEANNELEQRNLEDPLT 433 Query: 302 KAMGRKSFDEDLKALP------EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILK 355 R+ F + ++ ++ L + D+DKFK +NDT+GH +GD++L V L+ Sbjct: 434 GLHNRRYFTQQIEREYRRSRRNQRPMCLLMIDIDKFKAVNDTYGHGVGDDILQAVSTELR 493 Query: 356 SQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQ--------VGSINLSTSIG 407 Q V R+GG+EFA I L+ L + +V G +++ S G Sbjct: 494 KQARRPTDAVCRYGGEEFAFILAETDLQNGLVFAERLVKHIRQCVFSTRDGEHSITISAG 553 Query: 408 VAHSNE--CPTVERLKMLADERLYKSKKNGRAQIS 440 VA + +V L AD LYK+K+ GR Q+ Sbjct: 554 VAAIDNTRDHSVHDLFTAADSALYKAKREGRDQVV 588 >UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7X2_9GAMM Length = 365 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 12/194 (6%) Query: 258 GIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALP 317 ++E+ ++ + + + + + A D LT+ + R+ DE L+ Sbjct: 168 ALIEQTELVKKYMAELEAKVEERTLELKRANEKLEYLASTDPLTELVNRRRLDEVLEQEF 227 Query: 318 EKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGD 371 E+ L L D+D FK +NDT GH +GDEV+ V + Q+ R+GG+ Sbjct: 228 ERTSRYQGELSLILLDIDHFKAVNDTRGHQVGDEVIAGVGN-IAKQMSRKSDTAGRWGGE 286 Query: 372 EFAVIYTGGTLEELLSILKEIVHFQVGS-----INLSTSIGVAHSNECPTVERLKMLADE 426 EF ++ + + ++ +++ + + +S S GVA T++ + ADE Sbjct: 287 EFLIVAPQTSCDNAVAFAEKLRLSIENTEFSSGVRVSASFGVASLETGETIQLVLKRADE 346 Query: 427 RLYKSKKNGRAQIS 440 LY++K NGR ++ Sbjct: 347 ALYRAKHNGRNRVE 360 >UniRef50_D1U8T8 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U8T8_9DELT Length = 326 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 18/220 (8%) Query: 237 ALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAF 296 A++ A + + ++ + R + L + + + Sbjct: 93 AILDQAFAAGASDYIVKPVSAIELRARVRSALQLRREMVKRLLRERELERLARKLERMSN 152 Query: 297 LDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKV 350 LD LT R+ FD+ L + L + D+D FK+ ND GH+ GD L +V Sbjct: 153 LDSLTGLANRRCFDDTLVKEWVRNGRADAHLGLIMIDIDHFKHYNDALGHVDGDTCLRRV 212 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQVGSIN- 401 + +K + V R+GG+EFAVI G +++ I + +++ Sbjct: 213 AEAIKGVVHRPGDMVARYGGEEFAVILPGTDYTGAMAVADNIHASVAQTSIEHPDSAVSC 272 Query: 402 -LSTSIGVAHSNE--CPTVERLKMLADERLYKSKKNGRAQ 438 ++ SIGV+ T E+L AD LY++K+ GR + Sbjct: 273 VVTVSIGVSSGIPTCGSTPEQLIQAADRALYEAKEAGRNR 312 >UniRef50_A0LIF2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIF2_SYNFM Length = 352 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 55/179 (30%), Positives = 78/179 (43%), Gaps = 18/179 (10%) Query: 282 AADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNIN 335 A + + A LD LT+ R+S D L + L L D+D FK N Sbjct: 170 AKLRELNRKLERLATLDGLTRVANRRSLDRFLDLEWRRTRRERAPMALILSDIDHFKLYN 229 Query: 336 DTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI-VH 394 DT+GHL GD+ L V +K V R+GG+EFAV+ + + I + I Sbjct: 230 DTYGHLAGDDCLRAVATAIKECAKRPMDLVARYGGEEFAVVLPNTNADGAVHIAETICRE 289 Query: 395 FQVGSIN---------LSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQISWQ 442 + + L+ S GVA E T E L ADE LY++KK GR ++ + Sbjct: 290 VENLRVRHPESSTGEFLTLSCGVAAMVPREESTPEALVAAADEALYEAKKQGRNRVVLK 348 >UniRef50_D2R258 Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R258_9PLAN Length = 779 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 14/184 (7%) Query: 269 HFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDE----DLKALPEK--GGY 322 H VL +++ +++ A D LT+ R FDE +++ ++ Sbjct: 394 HGAAVLLHDASSRITLEQRVQTLHEKATRDPLTQVANRAEFDEIHATYVQSHRDRRLPFS 453 Query: 323 LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL 382 L + D+D FK IND FGH GDEVL +L+ V R+GG+EF ++ Sbjct: 454 LIICDIDYFKRINDNFGHQAGDEVLQSFAALLRRHTR-PGDLVARYGGEEFVLLCIDCDN 512 Query: 383 EELLSILKEIVH-------FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNG 435 +E+ +G+ +++ S GV T E + AD LY++K++G Sbjct: 513 TAATRRAEELRRELAEFPMAALGNKSITASFGVTELQNGDTPETMLRRADRALYQAKESG 572 Query: 436 RAQI 439 R + Sbjct: 573 RNTV 576 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 19/222 (8%) Query: 236 AALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSA 295 + + +I+ L L+ +R V + + + + A++K + N + Sbjct: 744 SLCIPLIAQGETLGLLNLCSDRAGVISSD--QQQLAKAVAEQVSLAIANIKLRERLENQS 801 Query: 296 FLDDLTKAMGRKSFDEDL------KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMK 349 D LT R+ ++ + + D+D FK ND GH GD VL Sbjct: 802 IRDPLTGLFNRRYLEQFFLQEIGRAKRYNHSIGVIMGDIDHFKQFNDQLGHDAGDHVLKT 861 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSI- 400 + +IL+S I R+GG+E ++ +LE+ L + + ++ + Sbjct: 862 IGRILQSNIR-GSDIACRYGGEEMTIVLPQTSLEDTLVKAESLRQAIASMEVEYKGKELG 920 Query: 401 NLSTSIGVA-HSNECPTVERLKMLADERLYKSKKNGRAQISW 441 L+ S+GVA + N T+ + AD LY++K GR ++ Sbjct: 921 TLTVSLGVACYPNHGETMVNIIQAADRALYQAKAAGRNRVVM 962 >UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQN9_VIBSL Length = 405 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 66/369 (17%), Positives = 137/369 (37%), Gaps = 28/369 (7%) Query: 98 LISSDECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYP----VTHNRSL 153 +S CI + +++ I+ + + + F +F ++ P +T N ++ Sbjct: 16 FLSGTYCIGLVIKQQSQAR-ILGMRSFFCAIFLLMVGFSLLSFGSHISPWLSKITSNMAI 74 Query: 154 IFLLGLERFSLLSKSLAMDSENL---------MFSLFKNGKPVTGDEYNAKNAIFTVSEA 204 FSL + ++ + +L F ++ Sbjct: 75 AGGFASMVFSLTQLRQSPSLYSVCVFLGLPVVIVTLIYFTLYDASTNARVITMSFYITLC 134 Query: 205 MEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEA 264 + V K + L + ++ I + + + + A Sbjct: 135 TVASVLVIKTGTVADVKAALVLLMSVFSAHSIFMLVRIWITLKEPNIDDFLQASSIHQLA 194 Query: 265 IINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK----- 319 I G + + + + S+Y+S+ D LT+ R++ +E L+ + Sbjct: 195 FIITAILLSTIGFTYNWLLNARLMQSLYSSSMKDSLTQLYNRRAMNEMLRREWMRSVRHN 254 Query: 320 -GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT 378 + + D+D FK +ND GH GD+VL K+ IL+ + +R+GG+EF ++ Sbjct: 255 HPLSVIILDIDHFKQVNDQHGHQTGDQVLKKIGIILQHNLRA-ADIPFRYGGEEFLIVLP 313 Query: 379 GGTLEELLSILKEIV-------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKS 431 + E + +++ ++ S NL+ S G++ V + ADE LY + Sbjct: 314 DTRIGEACKVAEKLRIIIEETKFWRQQSANLTASFGLSELWAEDKVPSMIKRADEALYYA 373 Query: 432 KKNGRAQIS 440 K+NGR + Sbjct: 374 KENGRNTVC 382 >UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q525_NITSB Length = 350 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 16/195 (8%) Query: 260 VEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE- 318 +E+ + N+ L ++L N A D LT+ R+ F+E L + Sbjct: 154 LEELRMENSQLNEQLKKYYEEINHLRRELRDTKNKAEFDYLTELFNRRKFEEYFHKLLKE 213 Query: 319 ------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDE 372 K L + D+D FK INDT+GHLLGDEVL + ++K+ + R GG+E Sbjct: 214 FNEGEGKPFSLIILDIDDFKQINDTYGHLLGDEVLKNLSSLIKTFLHSAH-IPARIGGEE 272 Query: 373 FAVIYTGGTLEELLSILKEIVH--------FQVGSINLSTSIGVAHSNECPTVERLKMLA 424 FA++ L+E +I + + G +N + SIGVA + T++ L A Sbjct: 273 FAILLPETPLDEAKTIAERLRKTVENRTIPIAEGDLNFTVSIGVAQVQKGDTMDSLLKRA 332 Query: 425 DERLYKSKKNGRAQI 439 DE LY++K+NG+ + Sbjct: 333 DEALYEAKRNGKNMV 347 >UniRef50_B0C2A7 Diguanylate cyclase (GGDEF domain), putative n=4 Tax=Cyanobacteria RepID=B0C2A7_ACAM1 Length = 368 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 112/324 (34%), Gaps = 26/324 (8%) Query: 143 YLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVS 202 +P S + +R +L + ++ + N + + + + Sbjct: 29 SPFPEVSRTSSLGSSDQDRPVILIAEDDRMTRAMISHILTNDGYRVVEAEDGETCLAAYQ 88 Query: 203 EAMEHFAYLPTGL-----YVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINR 257 ++ + L + + + + I + + + V Sbjct: 89 KSPPNLVLLDAMMPGMNGFECCGELMKFPESAYTPILMITGLEDQTSVDWAFDVGASDYI 148 Query: 258 GIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALP 317 ++ L+ + + A +D+LT+ R++F E L Sbjct: 149 TKPIHWPVLRQRVRIQLERTQLH-KQLEEANKRLTYLASVDELTQLPNRRAFTEALNREW 207 Query: 318 EK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGD 371 + L + D+D FK NDT+GH +GD L +V +++ + + R+GG+ Sbjct: 208 RRMAREKSSLALIMIDIDYFKVYNDTYGHPVGDSCLFQVARVIHTCVRRPADLPSRYGGE 267 Query: 372 EFAVIYTGGTLEELLSILKEIV----------HFQVGSINLSTSIGVAHSNEC----PTV 417 EFAVI TL + + + + +S S+GVA + Sbjct: 268 EFAVILPNTTLSGAIHVAENMRLSVQRLMIPHKNSANGPYVSLSLGVASVIPDIQEMESE 327 Query: 418 ERLKMLADERLYKSKKNGRAQISW 441 L + AD+ LYK+K GR ++ Sbjct: 328 TPLLLAADQALYKAKAEGRNRVCV 351 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 16/197 (8%) Query: 260 VEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK 319 V + + + + ++ A D LT R+ DE L+ + Sbjct: 440 VSERKAVESALRETNRQLHARIEEIGRLQVALQELAVRDSLTGLYNRRYLDETLEREVSR 499 Query: 320 ------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEF 373 L + D+D FK +NDT+GH +GDEVL + L + I + R+GG+EF Sbjct: 500 ARREGIPLSLVMLDIDHFKQVNDTYGHQVGDEVLRILASTLSADIRAE-DVACRYGGEEF 558 Query: 374 AVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGV-AHSNECPTVERLKMLA 424 ++ LE + + I + S+GV A+ T + L A Sbjct: 559 LILLPNMPLETTMLRAQGWRSAVEALSVKHGNFQITFTISLGVAAYPEHGKTPDDLTRCA 618 Query: 425 DERLYKSKKNGRAQISW 441 D+ LY++K GR Q+S Sbjct: 619 DQALYRAKNEGRNQVSV 635 >UniRef50_Q1MZ89 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q1MZ89_9GAMM Length = 577 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 15/184 (8%) Query: 269 HFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGY 322 L ++L A D LT R ++D + E+ Sbjct: 372 ELNNRLTTMEKELEEAKEQLNQSQLKAMTDSLTGLPNRGAYDVYAQQEYERYKRYGGELS 431 Query: 323 LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL 382 L + DVDKFK+INDT+GH GD+VL + + +K + + R+GG+EF V+ Sbjct: 432 LIVCDVDKFKSINDTYGHQAGDKVLQLISRQVKKGTR-ETDLLARYGGEEFVVLLPETKQ 490 Query: 383 EELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKN 434 E+ +S+ ++I+ HF+ + ++ S GVA + E++ AD LY++K+N Sbjct: 491 EDAVSVAEKIIEAVATSPFHFRGKRVQITISCGVASFKKGYRPEQVFDAADAALYRAKEN 550 Query: 435 GRAQ 438 GR Q Sbjct: 551 GRNQ 554 >UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5N6_ALHEH Length = 419 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 123/365 (33%), Gaps = 40/365 (10%) Query: 101 SDECIQVKEFEKNYCADIM--QVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLG 158 +D + ++ + YR + + + PV + I Sbjct: 66 TDPAVLRTLRQRLAAGQGFEGSAINYRKDGRPYHVE-------WLISPVRDDSGRITAWL 118 Query: 159 LERFS------------LLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAME 206 + LLS ++ + +++ + + + E Sbjct: 119 SIQRDVTHERELEQEARLLSTAVESSAASILITDTEGCIVYVNRGFEQITGYRRDEVLGE 178 Query: 207 HFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAII 266 A L +G + +D++ + F + + YL + + + + + Sbjct: 179 TPAVLNSGEQSARFYRDLWTTLERGETFRGTFLNRNRSGALFYLEQSITPVRADQGQVV- 237 Query: 267 NNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------G 320 V+ + +A D LT R SF++ L+ E+ Sbjct: 238 ------RYVATGKDITERVRMEEELKRAATTDALTGLANRLSFEQLLERDYERCRRYGGA 291 Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 L +FD+D FK +ND GH GD VL + ++ + + V R+GG+EF V+ Sbjct: 292 LSLLMFDLDHFKAVNDAHGHEAGDAVLQALAGLVLANVRT-ADTVARWGGEEFMVLLPET 350 Query: 381 TLEELLSILKEIVHFQVGS-----INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNG 435 L + +++ ++ S GV + T L ADE LY++K G Sbjct: 351 PLAAAGELAEKLRERVAAHRFPHGAPVTASFGVCALRDDDTCRTLVRRADEALYRAKHLG 410 Query: 436 RAQIS 440 R ++ Sbjct: 411 RDRVE 415 >UniRef50_Q47C21 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C21_DECAR Length = 410 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 13/198 (6%) Query: 254 VINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL 313 ++ G ++ IN+H + + +A L +++ + +D LT R+ F+E + Sbjct: 208 LVVEGFSVLQSGINSHIANLDEQVAQRTAELESALAAIHRLSTIDPLTGCFNRRLFNERI 267 Query: 314 KAL------PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 + ++ + D+D FK INDT GHLLGD+VL + + + ++ V R Sbjct: 268 QEELDRAIRYQRALAVIFCDIDHFKRINDTCGHLLGDQVLQEAAECFRRELRGHIDWVAR 327 Query: 368 FGGDEFAVIYTGGTLEELLSILKEIVHFQVGS-------INLSTSIGVAHSNECPTVERL 420 +GG+EF ++ +L ++ + + S + ++ S GV TV+ L Sbjct: 328 YGGEEFVIVLPETSLPAAIATAERLRLALTESMVALLPGLTVTASFGVTQHVPGETVQEL 387 Query: 421 KMLADERLYKSKKNGRAQ 438 AD +LY +K GR Q Sbjct: 388 LQRADNQLYAAKAAGRNQ 405 >UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA43_HYDS0 Length = 610 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 108/257 (42%), Gaps = 17/257 (6%) Query: 201 VSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLII--FFAALVAVISGASCLYLVRRVINRG 258 V A ++F L + ++ + + + A + S + V + N+ Sbjct: 354 VYYANDYFFELLGYDFDELKALTIFDILSPIHVKDLIDAFANKMPILSQEFHVFKKDNKI 413 Query: 259 IVEK--EAIINNHFERVLDGGLFFSAADVKKLYSMY-NSAFLDDLTKAMGRKSFDEDLKA 315 + K I N + F K+L + + D LT R+ + L+ Sbjct: 414 LFVKGTLDFIRNPENKDNAVFTFVDITKEKELSELLLKQSIEDTLTGIYNRRYLKDKLER 473 Query: 316 ------LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFG 369 E+ + +FD+D FK+INDTFGH +GD+VL+ + K++ I + R+G Sbjct: 474 HVNLAKRYERPLSVIMFDIDFFKHINDTFGHDVGDKVLIAISKVVSENIR-NTDIFARYG 532 Query: 370 GDEFAVIYTGGTLEELLSILKEIVHFQ-----VGSINLSTSIGVAHSNECPTVERLKMLA 424 G+EF ++ T E+ + +++ IN++ S GV + T E L Sbjct: 533 GEEFIIVAPETTKEDAKILAEKLRSLIRNLHFEEGINVTCSFGVVSLEKPDTKETLLKRV 592 Query: 425 DERLYKSKKNGRAQISW 441 D LY++K+ GR ++ Sbjct: 593 DNALYEAKRTGRNRVVV 609 >UniRef50_A0Y806 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y806_9GAMM Length = 562 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 122/356 (34%), Gaps = 44/356 (12%) Query: 105 IQVKEFEKNYCAD-IMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFL----LGL 159 I +++ ++ +D + F T + Y + + +I L Sbjct: 217 INPRDYNIDFYSDILFTREDVARKSPERVERFRQATLKGWKYALAYPEEIIQLIKKEYNS 276 Query: 160 ERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFA 219 E+ + A+ LM F + +F + +++ L ++ Sbjct: 277 EKSIDHLRFEALSVRGLMMPHFSEIGYINPIRIELMAKVFLDLDIVDNLDNLDGLIFESD 336 Query: 220 YKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLF 279 +R + I ++ +++ + L + R + I E++ + Sbjct: 337 TGLSSEVRSAIVFI-LTFVIVLLAVSGLLAIFNRRLQSEIRERKLV-------------- 381 Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKG------GYLCLFDVDKFKN 333 + A+ D LT + R+ F + + L D+D FK Sbjct: 382 --------EEKLETLAYTDPLTNLLNRRGFSTRYADELMRAQRYGDVFSVILIDLDLFKK 433 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 +ND +GH GD VL+ V +L + RFGG+EF ++ +L E + + Sbjct: 434 VNDQYGHESGDRVLVSVADLLLKDTR-ETDFCGRFGGEEFILLLPNTSLVEATVYARRLC 492 Query: 394 HFQVGS---------INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + + ++ S GV E AD+ LY +K NGR Q+ Sbjct: 493 QHIGDNNVRLQNGRLVTITASAGVTEWLSEDKGEATIRRADQALYHAKNNGRNQVV 548 >UniRef50_B7K319 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Cyanothece RepID=B7K319_CYAP8 Length = 660 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 98/251 (39%), Gaps = 28/251 (11%) Query: 218 FAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGG 277 ++ + I +YL + +R E+E + L Sbjct: 409 LEKSREFFRSRGVKSIMMVKTYYQSKANGLVYLEQCNYHRQWTEEEMSLLESVAAQLGIA 468 Query: 278 LF---FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDV 328 + + + A LD LT+ R+ FDE L ++ L + DV Sbjct: 469 IAHSHLLEQLKEANEKLAALANLDGLTQVANRRHFDEILAQRWKQCAREKQPLSLIMCDV 528 Query: 329 DKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSI 388 D FK ND +GH +GDE L+KV + + + V R+GG+EFAVI + + I Sbjct: 529 DYFKRYNDFYGHQMGDECLIKVAQTIAKTVQRPGDLVARWGGEEFAVILPNTDVNGVKYI 588 Query: 389 LKEIVH--------FQVGSIN--LSTSIGVAHS---------NECPTVERLKMLADERLY 429 + I + I +S S+G+A N ++ L AD+ LY Sbjct: 589 AQSIREQVQSLAIIHEDSPIKNQVSISLGIATIIPPAKTLENNHESLIKALIAQADQALY 648 Query: 430 KSKKNGRAQIS 440 ++K+ GR +I+ Sbjct: 649 QAKEQGRDRIA 659 >UniRef50_C8QXT9 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXT9_9DELT Length = 337 Score = 227 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 104/283 (36%), Gaps = 20/283 (7%) Query: 178 FSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAA 237 F+L + G + ++ + H + K + + Sbjct: 49 FALLLLDVQMPGMDGFETASLLRGRKQTRHLPIIFVTAISKEDKHVFKAYEAGAVDYLFK 108 Query: 238 LVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFL 297 + S + + ++ + + + + +R + L + + + + Sbjct: 109 PINAHILRSKVEIFLQLDRQQRLLAQK--SAELDRKVRELLGVKSQLEEANARLNELSLT 166 Query: 298 DDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 D LT R+ F E + + L L D+D FK ND FGHL+GDE L+++ Sbjct: 167 DALTGLANRRCFQETIHTEWRRAMRNRHPLTLVLGDIDSFKQFNDNFGHLVGDECLVRIA 226 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVG----------SIN 401 +++S + RFGG+EF ++ LE + + + + Sbjct: 227 AVIRSPLMRPSDLAARFGGEEFVILLPETDLEGGRHLAETVRQEVEKMSVEHPESGTRLQ 286 Query: 402 LSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQISWQ 442 L+ S GV+ + + L AD+ LY +K+ GR ++ Q Sbjct: 287 LTMSFGVSSVVPQPEFSEQDLICAADKALYVAKEGGRNRVQVQ 329 >UniRef50_A0YVI7 Regulatory components of sensory transduction system n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVI7_9CYAN Length = 477 Score = 227 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 18/190 (9%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYL 323 + + A + + + A +D LT+ R+SFDE L+ ++ L Sbjct: 269 IQSDITERHRMQIALEEANRKLQHLANIDGLTQIANRRSFDETLEQEWKRCFREQQPIAL 328 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 L DVD FK ND +GHL GDE L++V + + I V R+GG+EF VI Sbjct: 329 ILCDVDYFKAYNDYYGHLQGDECLIQVAQAISQVIKRPADLVARYGGEEFVVILPNTDGS 388 Query: 384 ELLSILK----EIVHFQVGSIN------LSTSIGVAHSNEC--PTVERLKMLADERLYKS 431 + + +I Q + ++ S+G++ + E+L AD LY++ Sbjct: 389 GARQVAQLIQDQIRQLQSPHVKSDVSSYITLSLGISSIIPSGMTSPEQLVNAADSALYQA 448 Query: 432 KKNGRAQISW 441 K+ GR QI Sbjct: 449 KQQGRDQIVV 458 >UniRef50_UPI0001AF5018 diguanylate cyclase, putative n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF5018 Length = 692 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 15/195 (7%) Query: 260 VEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK----- 314 ++ A + + L A +D LT R ++ E L+ Sbjct: 497 EQEVASRLQSLSARVASMEQEALGFRSNLEEQRQKALIDPLTGLANRAAWGERLELEMTQ 556 Query: 315 -ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEF 373 + +C+ D+D FK IND +GHL GD+VL V +LK ++ + RFGG+EF Sbjct: 557 WQQAKNSLLVCILDLDHFKRINDGYGHLAGDKVLKIVANVLKKRLR-PNDFMARFGGEEF 615 Query: 374 AVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVERLKMLAD 425 ++ + L++L E+ HF+ + ++ S+GV + + AD Sbjct: 616 VMLLPATPIGTGLTLLDELRTAVEECPFHFKGERVTITVSLGVTALRQGERSDTAIKRAD 675 Query: 426 ERLYKSKKNGRAQIS 440 + LYK+K+NGR ++ Sbjct: 676 QALYKAKENGRNRVE 690 >UniRef50_Q47X90 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47X90_COLP3 Length = 364 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 60/322 (18%), Positives = 132/322 (40%), Gaps = 21/322 (6%) Query: 139 TFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAI 198 V++++ + + + + L K+ +N ++ + N ++ +I Sbjct: 43 LVVWFVFQMFLAMYRFYNAIMFKKHLAQKAHEKIEKNELYFMLSNVFQAAMWTISSVLSI 102 Query: 199 FTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRG 258 + E + + + A + ++FF +++ + + I Sbjct: 103 VYAPQPYELVSLIMIIGIITAAALSMSSLYKAYLLFFFSMIIPQIIIMISFGEHQHIGLV 162 Query: 259 IVE-----KEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL 313 ++ +++ + + + K + ++ + +D+LT R+ F E Sbjct: 163 VLIFIYIPATILLSRAIYNSRLSSVEANDSLEKSVNELHRLSIMDNLTNIYNRRYFFEMS 222 Query: 314 KA------LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 K +K L + D+D FK +ND +GH GD +L+ +VK L+ + R Sbjct: 223 KKLIATAFREQKPVSLIMLDIDLFKRVNDNYGHQAGDCILIDLVKELEKVMR-KSDVFAR 281 Query: 368 FGGDEFAVIYTGGTLEELLSILKEIVHFQVG--------SINLSTSIGVAHSN-ECPTVE 418 GG+EF ++ +LE I +++ SI+++ SIGV+ N E ++E Sbjct: 282 IGGEEFTILLNNTSLEGAKVIAEKMRLTIENKVFIYNTTSIDITISIGVSELNTENTSIE 341 Query: 419 RLKMLADERLYKSKKNGRAQIS 440 L AD++LY++K GR ++ Sbjct: 342 DLYKQADKQLYRAKHKGRNRVC 363 >UniRef50_B1XII1 PleD protein n=3 Tax=Bacteria RepID=B1XII1_SYNP2 Length = 516 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 64/340 (18%), Positives = 118/340 (34%), Gaps = 38/340 (11%) Query: 140 FVYYLYPVTHNRS----LIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAK 195 F ++L + ++ + + M +F + Sbjct: 167 FTWWLASTLAHLIFTPVILLGKDFFSRKIPYHVIEMLLILAVFISVSWSIFIQSYPVAYL 226 Query: 196 NAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAAL----VAVISGASCLYLV 251 + + A++ + L +Y L +F + + ++ + Sbjct: 227 LLLILNWTVFRYGAFVSSLLVSIVSILAIYTTAHGLGVFVLESQNQSLLFLQSFMGVFAL 286 Query: 252 RRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKL-----------YSMYNSAFLDDL 300 ++ +VE+ + ++ LD K+L + LD L Sbjct: 287 SSLLLSAVVEERSRAQTSLKKALDNSTKLILERTKELRRSEALLRQTNQELQKLVHLDGL 346 Query: 301 TKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKIL 354 T+ R+ F++ L A + L LFDVD FK ND++GH GDE L+++ + + Sbjct: 347 TQIANRRCFNQRLTAEWHRLYREQKPLALILFDVDYFKRYNDSYGHQQGDECLIQIAQAV 406 Query: 355 KSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSIN---LS 403 K + V R+GG+EF V+ T E + K I IN ++ Sbjct: 407 KHLLKRPADLVARYGGEEFVVVLPNTTQEGATIVAKRIRRTVLELQIAHNATEINEAIVT 466 Query: 404 TSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQISW 441 S+GV AD+ LY +K+ GR +I Sbjct: 467 VSLGVVSGIPQSQEKPLTFVKKADQALYLAKQQGRNRIVV 506 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 18/180 (10%) Query: 278 LFFSAADVKKLYS-MYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDK 330 + D K+L + LD LT+ R+ F + ++ LC+ D+D Sbjct: 243 IIRDITDSKRLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQRFLRYHHPMALCMIDIDH 302 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL----- 385 FK++ND +GHL+GD VL V + L + + R+GG+EF ++ L+ Sbjct: 303 FKSVNDRYGHLVGDTVLCIVAQTLHDNLR-QVDILARYGGEEFVILLPETDLQTACASTE 361 Query: 386 ---LSILKEIVHFQVGSINLSTSIGVAHSNECP--TVERLKMLADERLYKSKKNGRAQIS 440 +++ + + G ++++ S+GV + P T+ERL AD+ LY++K+ GR ++ Sbjct: 362 RLRVAVAERRIETPSGPVSVTLSLGVVAIADGPAMTLERLLDAADQMLYRAKQAGRNRVE 421 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 15/175 (8%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKN 333 F + + A +D LT + R++ E ++ E+ L D+D+FK Sbjct: 276 FLKELREAQEKLVEMATIDSLTGLLNRRAGLERVEEELSRHQRSERAFACLLLDIDRFKK 335 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 INDT+GH GD VL + L+ + V R+GG+EF ++ + + ++I Sbjct: 336 INDTYGHQAGDAVLSEFGATLRRHVR-KHDIVCRYGGEEFLLLLPDTSPSAARTTAEKIR 394 Query: 394 H--------FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 F I ++TSIG++ T + + AD LY++K +GR ++ Sbjct: 395 AVTAATPIMFAGRQIAVTTSIGISMMQGDETAKAMIARADAALYEAKNSGRNRVV 449 >UniRef50_Q04S93 GGDEF domain receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04S93_LEPBJ Length = 330 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 89/243 (36%), Gaps = 27/243 (11%) Query: 225 YLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAAD 284 + + + ++ + + V + + + + Sbjct: 84 IPVIMITALKESNVLQKAFDSGAIDYVIKPFDATELLARVRSALRLFEEMTRRKEREKEL 143 Query: 285 VKKLYSMYN-------SAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKF 331 K + + D LT R+ F E L ++ G L + D+D F Sbjct: 144 EKLTDQLQEVNSYLVAISRTDSLTGLYNRRYFYEILTTEWKRCWRTGAGIALIMLDIDHF 203 Query: 332 KNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKE 391 K NDT+GH GD+ L +V + ++ R+GG+EFAVI + + + Sbjct: 204 KLYNDTYGHQGGDQCLKQVARAIRDCARRAGDVAARYGGEEFAVILPETNESNAVVVSRN 263 Query: 392 IVH-----------FQVGSINLSTSIGVA--HSNECPTVERLKMLADERLYKSKKNGRAQ 438 I+ + SI ++ SIG+A + ++ L AD+ LY +K+ GR Sbjct: 264 ILENVEKMAIPHSASKTNSI-VTVSIGMATLSPSPENSITELIERADKALYLAKEEGRNC 322 Query: 439 ISW 441 + + Sbjct: 323 LRF 325 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 20/204 (9%) Query: 257 RGIVEKEAIINNHFERVLDGGLFFSAADVKKLY---SMYNSAFLDDLTKAMGRKSFDEDL 313 R ++ E + + + + + + +D LT+ R FD L Sbjct: 1091 RKWLDHEITLLSQITITAAIAIHQGELHQQLQNANLELKKLSAIDGLTQVANRHRFDVYL 1150 Query: 314 KALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 + + L L DVD FK NDT+GHL GD L ++ +++K+ + V R Sbjct: 1151 EQEWRRLMRSRHSLSLILSDVDHFKWYNDTYGHLAGDHCLQQIARVIKTSVGRPADLVAR 1210 Query: 368 FGGDEFAVIYTGGTLEELLSILKEIV---------HFQVGSINLSTSIGVAH--SNECPT 416 +GG+EFA++ +L+ L + ++I H + ++ S+GVA + + Sbjct: 1211 YGGEEFAIVLPETSLKGALFVAEQIRQKVKNLTIPHTKSAYQCVTLSLGVASLIPSGALS 1270 Query: 417 VERLKMLADERLYKSKKNGRAQIS 440 + L ADE LY++K NGR ++ Sbjct: 1271 PKALINAADEALYQAKANGRDRVV 1294 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 82/189 (43%), Gaps = 18/189 (9%) Query: 267 NNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKG 320 +L L+ + + +++ A D +T+ F+ L Sbjct: 400 QLKLAEILGLHLYMILTQQRLTHLIHHQASYDPITQLPNWIIFNHRLALALVDATHGSNM 459 Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDK---GKVYRFGGDEFAVIY 377 + + D+++FK IND+ GH +GD +L K L++ + + R+ G F V+ Sbjct: 460 LGVLIIDLNQFKRINDSLGHGVGDYLLQKASDRLQNCLESYSFLEPLLARWHGAGFIVLL 519 Query: 378 TG-GTLEELLSILKEIVH-------FQVGSINLSTSIGVA-HSNECPTVERLKMLADERL 428 + ++E ++ +++++ Q +I L SIG+A + + E L A+ + Sbjct: 520 SQLAYVDEAINFSQKLLNDFQEPFYVQSQAIYLGVSIGIALAPYDGDSSEVLLKNAESAM 579 Query: 429 YKSKKNGRA 437 Y++K+ G+ Sbjct: 580 YQAKQQGKN 588 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 17/178 (9%) Query: 278 LFFSAADVKKLY-SMYNSAFLDDLTKAMGRKSFDE----DLKA--LPEKGGYLCLFDVDK 330 +F + K+L + + A D LT A R+SF E +L+ + L L D+D Sbjct: 223 VFRDISARKRLESDLKHLATTDGLTGAYNRRSFVEVCGQELQRADRRARPTSLLLMDIDH 282 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK 390 FK +ND FGH GDEVL ++V+ + + + V R GGDEFAV+ TLE+ + + Sbjct: 283 FKRLNDRFGHAAGDEVLRQIVETGRRVLRSE-DVVGRIGGDEFAVLLPATTLEQAGRVAE 341 Query: 391 EIVH--------FQVGSINLSTSIGVAHSNEC-PTVERLKMLADERLYKSKKNGRAQI 439 ++ + G+ + S GVA TVE L AD LY +K GR + Sbjct: 342 QLRTTYERLAVPARGGTATFTVSFGVAEWKPHLRTVEELLQRADRALYAAKNAGRNCV 399 >UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C2A6_ACAM1 Length = 420 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 21/209 (10%) Query: 253 RVINRGIVEKEAIINNHFERVLDGGLFFSAADVKK---LYSMYNSAFLDDLTKAMGRKSF 309 + + K + + L A + K + A D LT R+ F Sbjct: 206 QQQTLALAAKNKQLEEEIQAKLYAQQALEATNKKLDEANKQLSLIANHDALTGLANRRRF 265 Query: 310 DEDLKALP------EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKG 363 DE L+ + ++ L + D+D FK NDT+GHL GD L V + + I Sbjct: 266 DEYLQQIWKQTQREQQPLSLLICDIDFFKQYNDTYGHLEGDICLRTVAQKIHQTIVRPLD 325 Query: 364 KVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSIN--LSTSIGVAH--S 411 V RFGG+EFA++ LE + + + + S++ ++ SIG A S Sbjct: 326 LVARFGGEEFAIVLPNTDLEGGQVVAERLRMIIQKSQLPHRGSSVSEFVTVSIGAATVRS 385 Query: 412 NECPTVERLKMLADERLYKSKKNGRAQIS 440 + +V L AD+ LY++K++GR Q+ Sbjct: 386 HPHTSVSSLISRADQALYQAKQSGRDQVV 414 >UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUF5_9AQUI Length = 283 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 11/186 (5%) Query: 263 EAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK--- 319 ++ + L ++ + + A D LT R+ +E L E+ Sbjct: 95 HILVAEKLDDSLFMEIYLDTYISDLIRELRFLADTDSLTGFYNRRKIEEILAKEIERSRR 154 Query: 320 ---GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVI 376 + DVD FK +NDT+GH GDEVL K+ +I+KS++ V RFGG+EF VI Sbjct: 155 YGNPLSVLFIDVDNFKELNDTYGHKSGDEVLRKIAEIIKSELRR-TDYVGRFGGEEFMVI 213 Query: 377 YTGGTLEELLSILKEIV----HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSK 432 + L + + I + ++ S+GV E + L D +Y +K Sbjct: 214 LPETDSQSALRVAERIRKRVEREDFKTGKVTVSVGVTELKEGDDLNTLFNRVDRAMYLAK 273 Query: 433 KNGRAQ 438 + G+ + Sbjct: 274 ERGKNR 279 >UniRef50_Q3A1L9 FOG: GGDEF domain containing protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1L9_PELCD Length = 367 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%) Query: 249 YLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKS 308 + + + ++ I HF + + A + ++ + A +D LT+ R++ Sbjct: 147 FYMVSTASLVTLDGSPGIVGHFRDITIRKRAEA-ALEQANTALSHLARVDALTQIPNRRA 205 Query: 309 FDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDK 362 FDE L+A + L L D+D FK ND +GH GD+VL +V + L Sbjct: 206 FDEALQAEWGRLAREEGPLSLVLCDIDCFKKYNDHYGHQAGDKVLRRVAEALADCARRPA 265 Query: 363 GKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSIN--LSTSIGVAHSN 412 R+GG+EFA++ LE LS+ ++ S+ L+ S+GVA Sbjct: 266 DLASRYGGEEFALLLPQTPLEGALSVAEKARQAVEDLALQHPTSSVKPILTLSLGVASVI 325 Query: 413 E--CPTVERLKMLADERLYKSKKNGRAQIS 440 L AD+ LY++K R ++ Sbjct: 326 PSLHIAPTTLIESADKALYQAKNADRNRVV 355 >UniRef50_A8UWP4 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWP4_9AQUI Length = 425 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 70/327 (21%), Positives = 118/327 (36%), Gaps = 33/327 (10%) Query: 147 VTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAME 206 + +I L + F +L L +N F + V I+ +S Sbjct: 88 LKTQLWMIRFLFVIPFGVLFLFLTFKIQNERLIEFLHSLLVLIGGLGIVAMIYLISGDKY 147 Query: 207 HFAYLPTGLYVF----AYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEK 262 + Y L +F Y +++ V + N + Sbjct: 148 YLYYPGLMLVIFYAFTLSALRFYYATASVLALLLTYPVVDLYLLKTPEELHITNMFFLTS 207 Query: 263 EAIINNHFERVLDGGLFFSAADVKKLY-----------SMYNSAFLDDLTKAMGRKSFDE 311 A++ +L+ L + + +F+D LT R FD+ Sbjct: 208 SALLGMPVSYLLERHARKDFLLTMLLAFEKRKTDELNVRLRDISFIDGLTGVANRLRFDD 267 Query: 312 DLKALP------EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKV 365 + ++ + + D+D FKN ND GHL GDE L V K ++S I D V Sbjct: 268 FFRKEWRRARRTKRPISILMLDIDFFKNYNDLLGHLEGDECLKNVAKTIQSHIRADVDLV 327 Query: 366 YRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSIN--LSTSIGVAHSNECP 415 R+GG+EF V+ L+ L + + I ++ ++ SIGVA Sbjct: 328 ARYGGEEFVVVLPETDLKGALKVAERIRRDIEGLKIAHPGSQVSKFVTVSIGVASIVPID 387 Query: 416 TV--ERLKMLADERLYKSKKNGRAQIS 440 + E L +AD+ LY +KK GR ++ Sbjct: 388 NLKKEVLLNMADKALYVAKKRGRNRVE 414 >UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Phytochrome (GAF) sensor n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YS99_9CYAN Length = 628 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 103/277 (37%), Gaps = 22/277 (7%) Query: 185 KPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCT-LIIFFAALVAVIS 243 A L ++ + + T + + Sbjct: 347 PYFLSVLEEGIIISIDDLNQSFLSANLRDWWLELGIHSELIIPIVTKSSSTSSLSSSENK 406 Query: 244 GASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKK---LYSMYNSAFLDDL 300 L + +R + E + + + + + + A D L Sbjct: 407 LWGMLIACQLTQSRRWEKWEVHLLEQLTTPIAVAIQQAELYEQLKIANQELEKMAMTDGL 466 Query: 301 TKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKIL 354 T R+ FD+ L + L + D+D FK NDT+GHL GD L KV ++L Sbjct: 467 TLVANRRFFDKILSQEWNRLRREIGTLSLIICDIDYFKRYNDTYGHLAGDSCLKKVAQVL 526 Query: 355 KSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK----EIVHFQVGSIN------LST 404 + ++ V R+GG+EFA++ LE + + + ++ Q+ ++ Sbjct: 527 QEEVKRSGDLVARYGGEEFAILLPKTDLEGAILVSEVICSKVRALQITHEKSLVAPYVTI 586 Query: 405 SIGVAHSNECPT--VERLKMLADERLYKSKKNGRAQI 439 S+GVA + P + L + AD+ LY++KKNGR ++ Sbjct: 587 SVGVASTIPEPPLIPKTLILRADQALYEAKKNGRNRV 623 >UniRef50_Q2W9B2 GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W9B2_MAGSA Length = 352 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 84/197 (42%), Gaps = 18/197 (9%) Query: 263 EAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL------KAL 316 A +N E+ L+ A L + A D LT+ RK FD L Sbjct: 145 MADLNRQLEQRLENSSNEVARLRNHLDDLKREASTDALTQLANRKLFDHSLNLAVLDARA 204 Query: 317 PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVI 376 + L + D+D FK NDT+GH LGD+VL V + L R+GG+EFAVI Sbjct: 205 ADAPLSLLMIDIDHFKQFNDTYGHQLGDQVLKLVARSLSEVAQAK-DTAARYGGEEFAVI 263 Query: 377 YTGGTLEELLSILKEIVHFQVGS-----------INLSTSIGVAHSNECPTVERLKMLAD 425 LE+ + + + I + ++ SIG A E + L AD Sbjct: 264 LPATPLEKSMEVAETIRNQVSTKRLTNRRTGQVLGQVTLSIGAALLREAEAPDSLVHRAD 323 Query: 426 ERLYKSKKNGRAQISWQ 442 E +Y +K++GR ++ + Sbjct: 324 EAMYLAKRDGRNRVKSE 340 >UniRef50_Q2L341 Putative signaling protein n=3 Tax=Bordetella RepID=Q2L341_BORA1 Length = 521 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 126/346 (36%), Gaps = 19/346 (5%) Query: 107 VKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLS 166 + E+N A+++ +++ + G +P T + ++++ Sbjct: 176 LHLHERNALAELLGEQTHQNGSYQYVVDRRGVLL---FHPDTPRVGRLVDQNPVVLAIMN 232 Query: 167 KSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDV-Y 225 + +F+ + ++ L + + + + Sbjct: 233 ---GEEGTRRLFNNDGVDMLSGYALVHETGWGVVAQRPVDSVLAGTRKLLLLTIQTSLPW 289 Query: 226 LRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADV 285 L + L +++ A + + I E+ A + + + Sbjct: 290 LCLSLLCVWWLANRIARPLSQLAAAAADLDKPRIAERLASVGTWYREAEQLKTALATVSR 349 Query: 286 K---KLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE--KGGYLCLFDVDKFKNINDTFGH 340 K K + + D LT + R+ DE L++ P + + D+D FK IND GH Sbjct: 350 KIGTKFNQLRQDSLTDALTGLLNRRGLDEILQSEPRYGRAMSVLAVDIDHFKAINDELGH 409 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI 400 GD V+ + +L+S+ + R GG+EF V+ + L + I Sbjct: 410 AAGDAVIRGIAALLRSRARA-SDILGRLGGEEFVVLLPNTDRAQALQAAERIRAAVETFQ 468 Query: 401 NL-----STSIGVA-HSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + + SIGVA + +E ++ + ADE LY++K+ GR ++ Sbjct: 469 AVPGGACTVSIGVAVYPHEGASLTAVLERADEALYEAKRGGRNRVC 514 >UniRef50_C6NZP2 Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZP2_9PROT Length = 570 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 128/321 (39%), Gaps = 37/321 (11%) Query: 156 LLGLERFSLLSKSLAMDSENLMFSL-FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTG 214 G ++F +L + + LMF+ F K + I T++ + A + Sbjct: 246 HPGFQKFVILVSMVVYNVLGLMFAARFLALKKHSPRTLRGIRWIGTLAVVIMALALMVDS 305 Query: 215 LYVFAYKKDVYLRVCTLIIFFAALVAVIS-------------------GASCLYLVRRVI 255 +V A V T+ +F +++V+ G + L + ++ Sbjct: 306 QFVAAMVAFVCTTAFTIGMFLLGILSVLRNQTSGRYFLFATFFGMLGVGVTALAVWGKIP 365 Query: 256 NRGIVEKEAIINNHFERVLD--GGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL 313 R A E L G + + LY A LD LT R++F E Sbjct: 366 FRPYTFHAAEFGLVIEATLLALGLSNWMRENRDALYEAEQVARLDALTHLNNRRAFMELA 425 Query: 314 ------KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 E+ L + D+D FK+IND +GH GD VL V +LK V R Sbjct: 426 LPYASTAGRHERPMSLVMMDIDHFKSINDQYGHQTGDLVLTAVADLLK-NFSRTSDIVAR 484 Query: 368 FGGDEFAVIYTGGTLEELLSILKEIVHFQVG--------SINLSTSIGVAHSNECPTVER 419 +GG+EF ++ L++ ++ + + SI+L+ S G+A + ++ Sbjct: 485 WGGEEFILLLPETGLKQAINHAERLRQAIAEFRIPVGETSISLTASFGIAAHVANLSFDK 544 Query: 420 LKMLADERLYKSKKNGRAQIS 440 + AD +LY++K++GR ++ Sbjct: 545 MIEQADVQLYEAKRSGRNKVC 565 >UniRef50_A8ZVJ7 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVJ7_DESOH Length = 410 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 65/334 (19%), Positives = 111/334 (33%), Gaps = 24/334 (7%) Query: 131 GFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMF-----SLFKNGK 185 ++ D ++ +I + L + + L F L Sbjct: 73 YVLTPDIYPVAWFFRFALATPVMIAAMALASRQRFRRYIIHLLTLLFFMGGASLLLLAVL 132 Query: 186 PVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGA 245 + ++ + V +P V L + F ++ A Sbjct: 133 SSAPNAGHSYTGVALVILFAAIVIRIPFWHAVALCGGLFLLHLLIFPWFQMPTDLIVHSA 192 Query: 246 SCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMG 305 ++ V + G E + R L + + + A D LT Sbjct: 193 LVVFSVAVISLLGNYRIEREFRRAYLRALKMKI-DARQLEGLNRQLEEMAVSDPLTGLFN 251 Query: 306 RKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIP 359 R+ FD L A L D+D FK ND GH GD L ++ L + Sbjct: 252 RRHFDAHLDAEWRSAVREQLSISLIFIDIDHFKLYNDNHGHQAGDLCLKQIADTLTENVH 311 Query: 360 VDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV-HFQVGSIN---------LSTSIGVA 409 R+GG+EF V+ +++ L + ++I H Q +I ++ S+GVA Sbjct: 312 RPGDACVRYGGEEFVVLLANTNMDQALYVAQKIQSHLQALAIPHGYSPVAGEVTVSMGVA 371 Query: 410 H--SNECPTVERLKMLADERLYKSKKNGRAQISW 441 + T E L AD+ LY++K GR +I Sbjct: 372 SMVPDRDDTPEDLLEKADKSLYRAKDAGRNRICV 405 >UniRef50_B9Z7N2 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z7N2_9NEIS Length = 515 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 128/347 (36%), Gaps = 22/347 (6%) Query: 107 VKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYP---VTHNRSLIFLLGLERFS 163 ++ EKN ++ YR + G+ +++ P + + + R Sbjct: 174 IRLREKNILHGLLGEHYYRDGSYLYVVDGKGRL-IFHHDPARIMQDASGNPVVAAVMRGQ 232 Query: 164 LLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKD 223 ++ + M + + + + + A L + A Sbjct: 233 SGARPVTNTQGVAMLAGYAYVPSAHW-------GVVSQRPRAQALAELDQLMLTMAKYAA 285 Query: 224 VYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHF---ERVLDGGLFF 280 L + +++++ +L + + G + + + + +++ L Sbjct: 286 PLLLIIIVVVWWLSLQIARPLRQLAREAAAMDSHGATPRIEAVRSWYFEAQQLKQALLVG 345 Query: 281 SAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK--ALPEKGGYLCLFDVDKFKNINDTF 338 A ++L + D LT R+ D L + + + D+D FK++ND++ Sbjct: 346 MRAMQQQLNRFRQESNTDALTGLGNRRELDSVLDDWKYSRQPFAVLMIDIDFFKSVNDSY 405 Query: 339 GHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQV- 397 GH GD+ L + ++++ + V R GG+EF ++ G + + + Sbjct: 406 GHDTGDQALTALAQLMRDSAR-EGDVVCRMGGEEFVMLLPGADAIGAERVAERLCSRVEA 464 Query: 398 ----GSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 G L+ SIGVA T E L AD+ LY++K+ GR ++ Sbjct: 465 YRVPGLPALTVSIGVAAGIADETPEALLREADDALYQAKQQGRNRVV 511 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 13/209 (6%) Query: 246 SCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSM-YNSAFLDDLTKAM 304 S L + R + + E + ++ + + A D LT Sbjct: 222 SGLLMPISFACRAVFKNETRDGAVIAFRDITVQKKNLQSLEGINELLEKQASTDALTGIF 281 Query: 305 GRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQI 358 R F++ L + ++ L LFD+D FK +ND++GHL GD VL + +++ S + Sbjct: 282 NRMKFNQTLTSEIKRAKRYRVALSLILFDIDHFKQVNDSYGHLSGDTVLKHLARLVASNL 341 Query: 359 PVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI-----NLSTSIGVAHSNE 413 + R+GG+EF + +LE + + +++ + ++ S GVA Sbjct: 342 R-EIDIFARWGGEEFVIQAPETSLESAIKLAEKLRSKIENYVFPAPKKITVSFGVATFRS 400 Query: 414 CPTVERLKMLADERLYKSKKNGRAQISWQ 442 L ADE LY++K+ GR Q+ Sbjct: 401 SDNDITLVNRADEALYRAKEGGRNQVVSH 429 >UniRef50_C6D4J1 Diguanylate cyclase with GAF sensor n=2 Tax=Paenibacillus RepID=C6D4J1_PAESJ Length = 653 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 109/275 (39%), Gaps = 13/275 (4%) Query: 172 DSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTL 231 +N + N ++ + ++ + + + + + + Sbjct: 379 KEKNQFVVMASNIPAMSSEHFSPEYGFCGIVHRTKEPLIISDYWHTRVVNSKLMDNTGAR 438 Query: 232 IIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSM 291 + ++ + + + N + ++ V+ + + + + Sbjct: 439 SLIATPILVDSEVVGVIMVAHKSANFFSYDNYKLLQ-----VMSTHIGLAITNASLHAEV 493 Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEKG--GYLCLFDVDKFKNINDTFGHLLGDEVLMK 349 D+LT R +E +++ K G L L D+D FK INDTFGH +GD++L++ Sbjct: 494 RRMVITDNLTGLHARHYLNEQIQSRQRKDPLGALILVDIDHFKQINDTFGHQVGDQILVQ 553 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSIN--LSTSIG 407 V I++S I R+GG+E AV G E+ I + I ++ S G Sbjct: 554 VSSIIRSSIR-QGDIAARWGGEELAVYLPGIRSEQAYRIAERIRTHVEAETQPVVTVSCG 612 Query: 408 VAHS---NECPTVERLKMLADERLYKSKKNGRAQI 439 V+ NE +VE L AD LY++K NGR +I Sbjct: 613 VSEWTFENEKISVESLFYRADMALYEAKNNGRNRI 647 >UniRef50_UPI0001AEBFD1 Signaling protein with a acyltransferase and GGDEF domains n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBFD1 Length = 632 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 62/332 (18%), Positives = 115/332 (34%), Gaps = 33/332 (9%) Query: 141 VYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKN-AIF 199 + ++ ++ LI + L + L ++ K V Y Sbjct: 292 ISWVCGLSIILGLILPYSFMIKAFLLLLSLIVIFTLGLGIWLTLKGVVVARYFTIAWGFL 351 Query: 200 TVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLV-------- 251 +S + + + + + A ++A+ S L+ Sbjct: 352 LISGLSASLDNVNIIQLPISSNNLLIIGGAVETLILALILAINYSHSRDDLIEAQQFALE 411 Query: 252 ----RRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKL----YSMYNSAFLDDLTKA 303 ++E + + E + +++L + +D LT A Sbjct: 412 QEKQANTAKENLLEVQKRYQDDLEYKVQERTLELEITLRELSEVNQELERLNAIDPLTGA 471 Query: 304 MGRKSFDEDLKALP------EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQ 357 R+ FD+ L++ + L + DVD FK IND GH GD L+ V + + Sbjct: 472 HNRRHFDKRLRSEGRRSRREQTPLSLIIVDVDHFKQINDQHGHDGGDACLIHVTNVFQKH 531 Query: 358 IPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVA 409 I + R GG+EFA+I LE + + + ++ I L+ S GV+ Sbjct: 532 IHRPTDDLCRIGGEEFAIILPNTDLEGAFHVAENMRDSLESTPLDYEGEIIKLTASAGVS 591 Query: 410 H--SNECPTVERLKMLADERLYKSKKNGRAQI 439 + + L ADE LY++K GR + Sbjct: 592 TTIIIDEEHAQNLFKFADECLYEAKAAGRNTV 623 >UniRef50_Q2BQN9 Diguanylate cyclase, putative n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQN9_9GAMM Length = 529 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 18/217 (8%) Query: 240 AVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNS---AF 296 AV S L + ++E + +E ++ K M A Sbjct: 311 AVSQQLSGLVKAMDSFKKKEEQREQRLQGRYEDLIGKVEQMEEETRKVKAHMEEERLRAR 370 Query: 297 LDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKV 350 D LT R ++DE + E+ + + D+D FK INDT+GHL GD+VL V Sbjct: 371 TDPLTGLPNRAAYDEQIAQEYERWSRYRTSFSVVVADLDFFKKINDTYGHLAGDKVLRLV 430 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSINL 402 K++ I V V R+GG+EF ++ EE + ++ F + + Sbjct: 431 AKVITKNIRV-TDFVARYGGEEFVILLPSTVAEEAAQAMDKLRESLASSPFNFHGKPVGI 489 Query: 403 STSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + S GV E +++ + ADE LY++K++GR + Sbjct: 490 TMSFGVTEIKEGDSLDDVFTRADEALYQAKEDGRNLV 526 >UniRef50_Q47FN5 Response regulator receiver modulated diguanylate cyclase n=3 Tax=Betaproteobacteria RepID=Q47FN5_DECAR Length = 313 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 19/209 (9%) Query: 249 YLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKS 308 + + I+ ++ + + L + + + D LT R+ Sbjct: 100 DYLHKPISEIVLGAKIRAMQRIVLMRASLLAVTRKLDAANQELIRISSTDSLTGVANRRY 159 Query: 309 FDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDK 362 FDE + + L + D+D FK NDT+GH GDE L K+ + Sbjct: 160 FDEAMSIEWRRARRHSNSIALLMCDIDYFKLYNDTYGHQAGDECLRKIAAAISRHTERPS 219 Query: 363 GKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLS----------TSIGVAHSN 412 V R+GG++FAVI ++ L + ++I +N++ SIG+A + Sbjct: 220 DTVARYGGEKFAVILPETSIGGALMVAEKIRQA-TKELNITHASSPTGQVGLSIGIASAA 278 Query: 413 EC--PTVERLKMLADERLYKSKKNGRAQI 439 + L + AD+ LY++KK GR ++ Sbjct: 279 PGFDNPPDDLILAADKALYRAKKEGRDRV 307 >UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IJX5_PSEHT Length = 621 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 69/323 (21%), Positives = 128/323 (39%), Gaps = 35/323 (10%) Query: 151 RSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAY 210 L L + F L++ + + + +L + + + A+ + A+ +F Sbjct: 287 IWLFPTLVVTLFCLITTPIVLGYYVVT-TLLCIRQNPSEPQKALLLALCSFLAAIVYFII 345 Query: 211 LPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCL--------------YLVRRVIN 256 +GLY+F + ++ +C+L F+ AV+ + + Sbjct: 346 TVSGLYIFTNSRVAFVFICSLSCAFSLGYAVMKLFILQRDEQVTTQQTLIAKSAAQDALL 405 Query: 257 RGIVEKEAIINNHFERVLDGGLFFSA----ADVKKLYSMYNSAFLDDLTKAMGRKSFDED 312 + + + E +D F +K + D LT R+ FD+ Sbjct: 406 HERLSLQESVRQELETQVDERTFELQVTLRELEEKNRELEQLNMEDPLTGIKNRRFFDKK 465 Query: 313 L------KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY 366 L + + + D+DKFK INDT+GHL GD+V+ +K Q+ +V Sbjct: 466 LVMELRRSRREQTPLSVIMLDIDKFKVINDTYGHLTGDQVIRTAADTIKKQLQRPLDEVA 525 Query: 367 RFGGDEFAVIYTGGTLEELLSILKEIVHFQ--------VGSINLSTSIGVAHSNECP--T 416 R+GG+EF V+ + ++I ++I H +I+ + S GV S Sbjct: 526 RYGGEEFVVLLPNTQNDGAIAIAEKIRHAIATNNVHVAGTTISFTISAGVYTSVAEDINN 585 Query: 417 VERLKMLADERLYKSKKNGRAQI 439 E AD+ LY +K++GR Q+ Sbjct: 586 PEIFTERADKALYFAKQHGRNQV 608 >UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXG9_HALOH Length = 499 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 14/192 (7%) Query: 262 KEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL----KALP 317 I+ + F + + A D LT F L K Sbjct: 307 HLPILQHSFLESFANQFSVALQNALLYKKQEEMANRDGLTGLYNHAYFQNRLHLLLKQEN 366 Query: 318 EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIY 377 + L + D+D FK +ND FGHL+GD+VL ++ +LK + + + R+GG+EFA+I Sbjct: 367 KHPLTLIIMDIDNFKQVNDRFGHLVGDKVLKELAHLLKHNLR-EGDLIARYGGEEFAIIL 425 Query: 378 TGGTLEELLSILKEIVHFQVGS---------INLSTSIGVAHSNECPTVERLKMLADERL 428 L++ I K + + + ++ SIGVA N+ + E AD+ L Sbjct: 426 PETELKQGEFIAKRLRKLISDNEIVLDNNRSLYITVSIGVAQYNKKWSQEEFIDKADQAL 485 Query: 429 YKSKKNGRAQIS 440 YK+K+ G+ +++ Sbjct: 486 YKAKEAGKNRVT 497 >UniRef50_A8HV12 Putative uncharacterized protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HV12_AZOC5 Length = 372 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 20/299 (6%) Query: 152 SLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYL 211 SL +L L R+ +++ +A L F+ + + ++T++ ++ L Sbjct: 69 SLFLMLALPRWHRMAEWIAY----LSFTTYCLVGVAAFGHLAEQTRLYTIANTLQWMPML 124 Query: 212 PTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFE 271 ++ ++D + + + + + V AS YL RV+ ++ + H Sbjct: 125 YVASFILLQRRDAVIAAALVFLSMSIPIVVEFSASDSYLKDRVLGSLVINAYLV---HLV 181 Query: 272 RVLDGGLFFSAAD-----VKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKG---GYL 323 ++ LF + K ++ A D LT M R+ ++ L+ + L Sbjct: 182 ILVSLSLFVMTSLAFEQARAKAKALETMASTDSLTGTMNRRGLEQILRHVAGGSSGEIGL 241 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 L D+D FK INDT+GHL GD VL V K L + D V R+GGDEF +I L Sbjct: 242 ILIDIDNFKPINDTYGHLAGDAVLQAVAKRLAGVVR-DSDVVGRWGGDEFLIITRDAQLT 300 Query: 384 ELLSILKEIVHFQVGSI----NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 +++++ + ++ S GV + D LY +K GR + Sbjct: 301 DVIAMADRARQHVGTHVLAGMRVTLSAGVGVWDGQGPWADALQRIDRALYSAKAEGRNR 359 >UniRef50_C1XPT0 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XPT0_9DEIN Length = 351 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 68/316 (21%), Positives = 126/316 (39%), Gaps = 25/316 (7%) Query: 140 FVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIF 199 FV + YP SL +L L L +A + + + + Sbjct: 35 FVRWTYPFFSALSLFWLWALLTRKL---PVARIERQAILGIGLLFLSKYAYYFAFVGDLR 91 Query: 200 TVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGI 259 V + A++ L + Y + + AV+ A + + + R Sbjct: 92 GVWAEIGATAWVFAFLMILFYLTSDSRAGLRYSVLLVLIAAVLGAARLIPDLYQ--GRHQ 149 Query: 260 VEKEAIINNHFERVLDGGLFFSAADVK--------KLYSMYNSAFLDDLTKAMGR----K 307 E A + + L + ++ K + ++ A D LT + R + Sbjct: 150 AEFLAWLRDIVRLAAMAALLYVFSNAKDRLALAHQRARELHLLAHTDGLTGLLNRLGATR 209 Query: 308 SFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 + ++ L A ++ + L D+D FK+IND FGH +GD+VL++V L+ + + V R Sbjct: 210 ALEDRLAA--QRPIAVVLADIDHFKSINDRFGHAVGDDVLIEVGVRLRDALR-EGDAVGR 266 Query: 368 FGGDEFAVIYTGGTLEELLSILKEIVHFQV-----GSINLSTSIGVAHSNECPTVERLKM 422 +GG+EF +I + L +++ + + G ++ S+GVA + L Sbjct: 267 WGGEEFLMILESAEAGQALVLVERLQNRMHSRPFPGVGRVTVSLGVAVHQPGESQADLLR 326 Query: 423 LADERLYKSKKNGRAQ 438 ADE LY +K+ GR + Sbjct: 327 RADEALYAAKRQGRNR 342 >UniRef50_Q1H488 Diguanylate cyclase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H488_METFK Length = 469 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 66/329 (20%), Positives = 114/329 (34%), Gaps = 29/329 (8%) Query: 141 VYYLYPV--THNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAI 198 Y+ + ++ F E F L++ + + G V NA N Sbjct: 117 AYWQFGFCGFIIIAMAFRKATESFPQLNRIILGKNTVPFMLTPLLGIIVYMLALNAGNLF 176 Query: 199 FTVS-------EAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLV 251 + + +++ + I A ++ + S L + Sbjct: 177 SAIMSSSPIVTAPLGWGSWIMAAATFVLVRAFCSDDKLVTIFLSIAALSHLCHVSHLLID 236 Query: 252 RRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYS----MYNSAFLDDLTKAMGRK 307 + + F +L + + + L + A D LT R Sbjct: 237 NTPFSANWYMAHLLSLFSFTTLLAVLILQLSQFTRDLADSHAYLMEKAHKDSLTGIYNRG 296 Query: 308 SFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVD 361 FDE + + L + D+D FK ND FGH+ GD+ L K+ + L + + Sbjct: 297 YFDETAELEWRRAQRNGTPISLLMLDIDHFKGYNDQFGHVKGDKCLKKIAQALHANMQRP 356 Query: 362 KGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQ-------VGSINLSTSIGVAHSN-- 412 V RFGG+EF V+ T E ++ +++ +S SIG A N Sbjct: 357 GDFVARFGGEEFVVLLPATTAEGCHAMAQKLHLAVQKLKISAGDHRRVSVSIGHATWNGP 416 Query: 413 -ECPTVERLKMLADERLYKSKKNGRAQIS 440 E ++ L AD LY +K+ GR +I Sbjct: 417 YENGSINELLSQADLALYTAKRLGRNRIV 445 >UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N773_9GAMM Length = 462 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 91/197 (46%), Gaps = 14/197 (7%) Query: 258 GIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL- 316 ++ A++ F + + + + D LT R D+ + Sbjct: 267 RMLIVIAVVVALFFYRYLLVNQHNRELQRVNKKLEQLSQRDHLTGIHNRYYLDQAFQQEL 326 Query: 317 -----PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGD 371 + G + + D+D FK IND++GH++GD+V+ ++ +L+ + D+ V R+GG+ Sbjct: 327 TRYKRYQHGFTIVMLDIDLFKQINDSYGHVVGDDVIKQIAMLLREHVR-DQDVVARWGGE 385 Query: 372 EFAVIYTGGTLEELLSILKEIVH------FQVGSINLSTSIGVAHSNECPTVERLKMLAD 425 EF ++ +L+ ++ + + F V I+++ S GV +E + AD Sbjct: 386 EFLILNPETSLDGARTLAEHLRRLIRRTPFTVDKIDVTVSFGVTDYRAGEDIETMIQRAD 445 Query: 426 ERLYKSKKNGRAQ-ISW 441 LY++K++GR + + + Sbjct: 446 SALYQAKQSGRDKTVVF 462 >UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC96_DESAH Length = 1268 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 12/194 (6%) Query: 258 GIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALP 317 + A++ + F+ + + + D LT R D+ L Sbjct: 1073 RYLFITALLFSGILFWNRKLSAFNRQMAEANAKLEQLSVTDRLTGLYNRMKIDDTLLEEI 1132 Query: 318 EK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGD 371 + L L D+D FK +NDT GH GD VL+++ K + I R+GG+ Sbjct: 1133 GRVLRYNYPLSLILMDIDLFKQVNDTHGHQAGDAVLIQMAKTMDKNIRS-TDICGRWGGE 1191 Query: 372 EFAVIYTGGTLEELLSILKEIVHFQVGSI--NL---STSIGVAHSNECPTVERLKMLADE 426 EF VI L+ LS+ + + I ++ + S GVA + L AD Sbjct: 1192 EFMVICPHTDLKGALSLAEHLRESIARQIFPHVITQTGSFGVAQYGNGDSEADLIARADR 1251 Query: 427 RLYKSKKNGRAQIS 440 +Y +K+ GR ++ Sbjct: 1252 AMYLAKEGGRNRVE 1265 >UniRef50_UPI0001C3940A response regulator receiver modulated diguanylate cyclase n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C3940A Length = 392 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 77/175 (44%), Gaps = 18/175 (10%) Query: 282 AADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNIN 335 A K + A DDLT+ R+ F+E L + L L DVD FK N Sbjct: 186 IALKKTNQELQRLALYDDLTQVANRRRFNEYLAYNWHRCSREQEPIALILCDVDYFKPYN 245 Query: 336 DTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF 395 DTFGH GD+ L K+ + + I V R+GG+EFA+I + + + + I Sbjct: 246 DTFGHQAGDDCLHKIARAISGAIQRSVDLVARYGGEEFAIILPNTPINGAVKVAERIRKQ 305 Query: 396 QVG----------SINLSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQ 438 S ++ S+GVA + +V+ L ADE LY++K GR Sbjct: 306 VENLRVPHPGSQSSDYVTVSLGVACKIPHSELSVDSLIAQADEALYQAKNQGRNC 360 >UniRef50_B7KCD2 Diguanylate cyclase with PAS/PAC and GAF sensors n=2 Tax=Cyanothece RepID=B7KCD2_CYAP7 Length = 960 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 91/241 (37%), Gaps = 21/241 (8%) Query: 223 DVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSA 282 ++ R+ ++ L R EA + L + S Sbjct: 718 ELLERLQVRAKLVVPILQQDRTWGLLIAHHCTSPRQWQPFEAELLTQLATQLAIAIQQSE 777 Query: 283 ADVKKL---YSMYNSAFLDDLTKAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKN 333 + + N A +D LT+ R+ FD DL+ + + L L D+D FK Sbjct: 778 LHQQLQSTNQQLENLALIDQLTQIPNRRCFDHDLERHWQNLARQKRPLSLLLCDIDYFKQ 837 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI- 392 NDT+GH GD L +V + LK+ V R+GG+EF +I +++ + I Sbjct: 838 YNDTYGHSGGDVCLTQVAQALKASARRASDLVARYGGEEFVIILPDTDNFGAIAVAQNIQ 897 Query: 393 ---------VHFQVGSINLSTSIGVAHSNECPTVE--RLKMLADERLYKSKKNGRAQISW 441 S ++ SIG+A + L AD+ LY++K GR + S Sbjct: 898 KTLKELRLPHRASGVSSYVTVSIGIATLIPRSDLPSIELINAADQALYQAKAQGRDRYSS 957 Query: 442 Q 442 Sbjct: 958 H 958 >UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BRN6_9GAMM Length = 504 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 23/219 (10%) Query: 245 ASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLY---SMYNSAFLDDLT 301 ++ +N E ++ + ++L + + A D LT Sbjct: 285 FEMSFMSCEQVNGITDEARELLVMRYLQLLQHASEADRKASELERTAVQLQEMARRDPLT 344 Query: 302 KAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILK 355 A R+ FDE L E + L D+D FK +ND +GH GD VL V K + Sbjct: 345 GAYNRRYFDEMLSQRFEAATRHQQPLSLGFLDLDHFKMVNDRYGHQAGDVVLAGVAKAIS 404 Query: 356 SQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS---------INLSTSI 406 S++ D + R+GG+EF ++ LE IL+ I I ++ S Sbjct: 405 SRLRGD-DFLARYGGEEFVLLLPNTNLELAQRILERIRAHIETEEHTVAPEHMIRITLSA 463 Query: 407 GVAHSNECPTV----ERLKMLADERLYKSKKNGRAQISW 441 G A + + + L AD LY +K+ GR ++ Sbjct: 464 GAAAHMDGSRISNKLDDLIRAADRALYLAKRQGRNRVEV 502 >UniRef50_A8GJ51 Diguanylate cyclase n=1 Tax=Serratia proteamaculans 568 RepID=A8GJ51_SERP5 Length = 370 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 96/254 (37%), Gaps = 16/254 (6%) Query: 200 TVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGI 259 +++ L + Y + ++ + A+ I S LV + + Sbjct: 112 SINLLYPLTLGLLFSSLIAFYLSPRLFFLFSIPVLLVAIAENIFINSAFSLVNLISYALM 171 Query: 260 VEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK 319 + + E+ + + + + + A D LT R+ FD A+ + Sbjct: 172 LFLIYSARSRLEQWFQLAIERELENKQLIERLSKLANRDPLTGIANRRYFDNYFDAVLLR 231 Query: 320 ------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEF 373 L L DVD FK ND +GH GDE L ++ L+S + V R+GG+EF Sbjct: 232 ESTLQAPFSLILLDVDFFKKYNDHYGHQQGDECLTRLATCLESATRRSQDLVARYGGEEF 291 Query: 374 AVIYTGGTLEELLSILKEIV---------HFQVGSIN-LSTSIGVAHSNECPTVERLKML 423 ++ E + + K I H ++ S GVA E+L Sbjct: 292 IILLPKSDAGEAVQVAKRIEGLLAGLAMPHAASEVAQWVTVSQGVAQWQPGQNREQLLAA 351 Query: 424 ADERLYKSKKNGRA 437 AD+ LY++K+ GR Sbjct: 352 ADQALYRAKELGRN 365 >UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWB7_DESAC Length = 513 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 103/290 (35%), Gaps = 32/290 (11%) Query: 182 KNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAV 241 +++ + + + FA +V ++ ++ + Sbjct: 222 SLTYSFISEDFAELTLMVRNVDHQQAFALKTKVFREMNNHLRQVFKVTVTVMVMLGVIGI 281 Query: 242 ISGASCLYLVRRVINRGIVEKEAIIN----------NHFERVLDGGLFFSAADVKKLY-- 289 + L + + I +H R L + + ++ Sbjct: 282 LLVELLLNHLVLSPISAQINHFNRIGESGDLSERFEDHSSRELHQLSQTANHMLDRIESL 341 Query: 290 --SMYNSAFLDDLTKAMGRKSFDEDLKALP---EKG---GYLCLFDVDKFKNINDTFGHL 341 + ++ D LT+ R+ FDE L+ + L + D+D FK NDT+GH Sbjct: 342 NKELQLASMTDSLTRVGNRRQFDEHLQHEWLIARRNGTVVSLLMIDIDHFKLYNDTYGHQ 401 Query: 342 LGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQV---- 397 GD+ L V +++ +Q+ + V R+GG+EFAVI L + + I Sbjct: 402 DGDQCLQSVAEVISNQVKREADLVARYGGEEFAVILPDVPLIGAQKVAERIRQAINDLGI 461 Query: 398 ------GSINLSTSIGV--AHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + ++ SIG E L AD+ LY++KK GR I Sbjct: 462 PNVDALKTPWITVSIGYESMSPQSGQDCEELIRFADQALYRAKKAGRNCI 511 >UniRef50_Q48MB2 GGDEF domain protein n=14 Tax=Pseudomonas RepID=Q48MB2_PSE14 Length = 509 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 63/342 (18%), Positives = 110/342 (32%), Gaps = 56/342 (16%) Query: 114 YCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDS 173 Y + + I+ G V Y LE L+ K + Sbjct: 196 YFKHLFMSQNLGVGSSINLINTAGILIVRYP-------------DLEGEDLIGKDYSHSP 242 Query: 174 ENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLII 233 +G ++T S + + + V+ R L+ Sbjct: 243 NFQRILQEGDGSFAAMSTQLNARRLYTFS-RVGNLPLVVVIGQSEDEVYAVWRRNAWLVG 301 Query: 234 FFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYN 293 +++ + L R + R E ++ + Sbjct: 302 SATSVLCLGILWLTWLLCRELRRRHRAE---------------------------DALAS 334 Query: 294 SAFLDDLTKAMGRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVL 347 A D LT R+ DE ++ + L + DVD FK N+ GH GDE L Sbjct: 335 LAATDGLTGLDNRRQLDEAMETEWARAQRSGKQLSLLMIDVDHFKAFNERHGHQGGDEAL 394 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH-------FQVGSI 400 + + + I +V R+GG+EF V+ L + I ++I F Sbjct: 395 RLIAQTISFNIRRPGDRVARYGGEEFVVVLPETELPGAMMIAEKIRKAAESLPLFPDAQQ 454 Query: 401 NLSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQIS 440 ++ SIGV + +E +AD+ LY++K GR ++ Sbjct: 455 PITVSIGVVSEMVRQGDKLEAFFGIADKALYQAKHKGRNRVE 496 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 17/190 (8%) Query: 267 NNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------G 320 R + L + A+VK + D LT R+ +E L+ + Sbjct: 1058 KRQLARTVVEHLAIALANVKLQEKFKAQSMRDALTGLFNRRYLEESLEQEIHRARRNHYS 1117 Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 + + D+D FK ND FGH GDEVL V ++L+ I R+GG+E +I Sbjct: 1118 VGIVMIDIDHFKRFNDQFGHDAGDEVLKTVARLLQGSIRS-SDIACRYGGEELTLILPEA 1176 Query: 381 TLEELLSILKEIV--------HFQVGSI-NLSTSIGVAH-SNECPTVERLKMLADERLYK 430 +L + + ++I H++ S+ +++ S GVA T+E + +AD LY+ Sbjct: 1177 SLSDTQARSEQIRYMIEHLQLHYENQSLGSITASFGVACFPEHGETLEAVLRIADTALYQ 1236 Query: 431 SKKNGRAQIS 440 +K GR ++ Sbjct: 1237 AKALGRNRVV 1246 >UniRef50_A1TUA2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TUA2_ACIAC Length = 591 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 14/202 (6%) Query: 253 RVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDED 312 + + ++E+E ++ + + + A + + N A D LT R+ FDE Sbjct: 383 QSMTASLLEREQELSRLNTSLENQVRERTLALHQANQELENLAVRDPLTGLYNRRRFDEA 442 Query: 313 LK------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY 366 L+ L + D D FK +NDT GH GD VL + ++ + + Sbjct: 443 LQAYTARCRELGHRFALMIVDADHFKRVNDTHGHQTGDAVLRHLAGVITGCVRS-TDFIA 501 Query: 367 RFGGDEFAVIYTG-GTLEELLSILKEIVHFQV-----GSINLSTSIGVAHSN-ECPTVER 419 RFGG+EF V+ EE + ++I G +L+ SIG+A + + Sbjct: 502 RFGGEEFVVLMPEPRDREEGRFVAEKIRLAVGHTPFPGVGHLTVSIGLAFCHGGGEPLAT 561 Query: 420 LKMLADERLYKSKKNGRAQISW 441 + AD+ LY++K+ GR ++ Sbjct: 562 ILERADKALYQAKEEGRDRVCV 583 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 12/171 (7%) Query: 281 SAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNI 334 + + ++ D LT R+ + L L L D+D FK I Sbjct: 319 ITERTRMQEELREASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLLDIDHFKRI 378 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH 394 NDTFGH GD VL +V +++ + + + R+GG+EF + ++ + ++I Sbjct: 379 NDTFGHDSGDLVLTQVAELISAILRS-TDILARYGGEEFVIACPETDMDGAAVLAEKIRS 437 Query: 395 FQV-----GSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 ++ S+G++ + L AD LY +K+ GR ++ Sbjct: 438 SIAMFSFPTVGAVTISVGISLLESKDDINALIKRADTALYAAKEMGRNRVV 488 >UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8FZ07_SHESH Length = 298 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 22/191 (11%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYL 323 F V+ + D+ + Y++ D L R+ D LK E+ + Sbjct: 86 FVFVVCSLSLRTTRDIMQNYALKQENITDSLMGIFNRRYLDRRLKDETERALNYSQPLSI 145 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 L D+D FK +ND +GH +GD VL + +++K + + + RFGG+EF VI Sbjct: 146 FLIDIDHFKQVNDNYGHQVGDLVLKNIAQLIKHSLR-ESDVLARFGGEEFVVILPRTKDS 204 Query: 384 ELLSILKEIVHFQVG--------------SINLSTSIGVAHSN-ECPTVERLKMLADERL 428 ++ + + H SI+++ SIGVA N +C + L AD L Sbjct: 205 TSYTLAERLRHVVEDFQLTLPEESDKDSLSISVTVSIGVAGLNAQCKDCQCLIENADRAL 264 Query: 429 YKSKKNGRAQI 439 Y++K+NGR Q+ Sbjct: 265 YQAKRNGRNQV 275 >UniRef50_C1XHK3 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XHK3_MEIRU Length = 351 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 70/319 (21%), Positives = 128/319 (40%), Gaps = 23/319 (7%) Query: 138 KTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNA 197 + F+ +LYP + I + + L E + + Y Sbjct: 38 EGFIRWLYP-----AFILMCAGWAWRLYRGVNLGAIERETIATVTLFFTIKLAYYLFWGN 92 Query: 198 IFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINR 257 + +E ++ + V Y + T + A + ++ V + R Sbjct: 93 LEQNWVEIESTYWVMAFVMVLLYIVFDARKGLTYSLALAVVTLILGLLRLGGEVAQGQYR 152 Query: 258 GIVEKEAIINNHFERVLDGGLFFSAADVK--------KLYSMYNSAFLDDLTKAMGRKSF 309 E A + + GL ++ A VK ++ M+ A D LT R + Sbjct: 153 --TEFLAFVRSEMRLFAMAGLLYALAIVKDQLALANRQVEEMHALARTDPLTGLPNRLAL 210 Query: 310 DEDLKALPEK--GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 E L+ + G YL L D+D+FK IND FGH GDEVL +V + L+ + + + R Sbjct: 211 SELLEEASQHMHGLYLVLLDIDRFKQINDRFGHAAGDEVLREVARRLRVSMRKE-DVLGR 269 Query: 368 FGGDEFAVIYTGGTLEELLSILKEIVHFQVG-----SINLSTSIGVAHSNECPTVERLKM 422 +GG+EF ++ G + +++ + ++ + +S S GVA + ++ L Sbjct: 270 WGGEEFMILMRGESQQDVPAAVERLREDIAFWPFKLVGPVSASFGVAEGHIGDSIHALVE 329 Query: 423 LADERLYKSKKNGRAQISW 441 AD LY++K+ GR ++ Sbjct: 330 RADRALYEAKRLGRNRVEM 348 >UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXY8_CHRSD Length = 608 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 17/185 (9%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYL 323 F + + + S ++V+ + ++ D LT R+ DE L + + Sbjct: 419 FAKGVAEDMVLSLSNVRLREQLEEASIRDALTGLYNRRFLDETLARELARAERQAVPLCV 478 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 + D+D FK IND +GH LGD L+ V ++L + + D V R+GG+EF +I G L+ Sbjct: 479 LMLDIDHFKPINDDYGHALGDRALVAVAELLNAHVRRD-DIVCRYGGEEFVIIMPGAGLD 537 Query: 384 ELLSILKEIVHFQV---------GSINLSTSIGVA-HSNECPTVERLKMLADERLYKSKK 433 + I L+ S+G+A + E L AD LY++K+ Sbjct: 538 AAQRRGDHLRRCVSALDVEANVPAPIRLTVSLGLACYPQHGDNAEHLLHSADMALYEAKQ 597 Query: 434 NGRAQ 438 GR + Sbjct: 598 GGRNR 602 >UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KAX1_PSEFS Length = 388 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 67/301 (22%), Positives = 120/301 (39%), Gaps = 31/301 (10%) Query: 158 GLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEY-NAKNAIFTVSEAMEHFAYLPTGLY 216 ER+ L + ++ T D A +FTV ++ + Y Sbjct: 100 TPERWER-RYWLTLMLSAGIWGAGALAVMPTDDRLSQALVMLFTVGMSVSAVSCYSAYRY 158 Query: 217 VFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDG 276 + + L CTL + F + A + + + R L Sbjct: 159 MTLASLALVLLPCTLWLLFQPSSMQVGVAIAVLVFSTFVVSA------------TRKLSD 206 Query: 277 GLFFSAADVKKLYSMY----NSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLF 326 L + +++ + +A D+LT M R++F E + + + Sbjct: 207 ALEKAFRLTRQMERAHTISTRAAQTDELTGLMNRRAFFEHAQVLYEQCRHNRQPLCALMM 266 Query: 327 DVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELL 386 D+D FK INDT+GH GD+VL ++ ++ + R GG+EFAV+ +L+ Sbjct: 267 DMDHFKQINDTYGHQAGDQVLRQIGGVISASFR-QADVYGRLGGEEFAVLLPNTSLDTAR 325 Query: 387 SILKEIVHFQVGSIN-----LSTSIGVAHSNECP-TVERLKMLADERLYKSKKNGRAQIS 440 +I +++V G + LS S+GVA ++ + L AD+ LY++K GR Q++ Sbjct: 326 TIAEQLVKAISGLASEPVHGLSASLGVASTHTQDQDLHGLMNTADKALYRAKAQGRNQVA 385 Query: 441 W 441 Sbjct: 386 V 386 >UniRef50_A8UY33 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY33_9AQUI Length = 345 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 18/206 (8%) Query: 250 LVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSF 309 ++ R+++ V +N F + L+ ++L + A +D LT R+SF Sbjct: 142 VLNRIMHE--VRGLKSVNRKFIQRLEEQRGEIERLREELRRVKEEANIDPLTGLRNRRSF 199 Query: 310 DEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKG 363 + L + + D+D FK INDT+GHL GD+VL ++ IL++ + Sbjct: 200 ERALSEFFRDFKKFGYPFSVIMIDLDNFKQINDTYGHLAGDKVLKEIGNILRNYLRAK-D 258 Query: 364 KVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNEC- 414 R GG+EF +I G T EE L + + + + IN + S GVA NE Sbjct: 259 VPARTGGEEFTIILPGITREEALMVAERLRKVIANYTVEHEDKKINPTASFGVAEVNEQV 318 Query: 415 PTVERLKMLADERLYKSKKNGRAQIS 440 T E L LADE LYK+K+ G+ + Sbjct: 319 ETPEDLLRLADENLYKAKRRGKNTVV 344 >UniRef50_A1HS81 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS81_9FIRM Length = 553 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 12/172 (6%) Query: 281 SAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKG------GYLCLFDVDKFKNI 334 K + + D LT R+ F + L+ E+ L + D+D+FK+I Sbjct: 378 VTRYKKMEEELRQLSVTDSLTNVYNRRYFVQKLEEEIERAKRAGSKFSLVMLDIDRFKSI 437 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH 394 ND FGH GD VL + +++K++I + R+GG+EF ++ T+ + + +++E+ Sbjct: 438 NDRFGHNAGDLVLKSMAEMIKNRIRKI-DTLARWGGEEFVMLLPETTVNKAVVLVEELRE 496 Query: 395 F-----QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 G ++ S GV T++ L D +Y++K GR + + Sbjct: 497 SLSQMDIPGVGRVTASFGVVGYCPGDTIDTLMQRVDALMYEAKAAGRNCVRY 548 Score = 42.6 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 45/154 (29%), Gaps = 32/154 (20%) Query: 17 IMISAVACGIYTQMVKERVYSLKQSVIDT-AFAVANIAEYRRSVAIDLINTLNPTEEQLL 75 +M+ + + + R+ + ++ V + R E L Sbjct: 266 LMLEGIPSPAWLVSKEHRILAQNKAAASLFGTKVGDYCWERVLGG-----------EYLS 314 Query: 76 VGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQVVKYRHVKNTGFISF 135 R A + SP L Y DE + + ++ + F Sbjct: 315 DEYREALEKNGSP--LLGTKCYFCRGDEAL---DKNAPINSE---------------VEF 354 Query: 136 DGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSL 169 G + + P+ + L + + R+ + + L Sbjct: 355 AGGIWDTWWIPLGEDIYLHYATDVTRYKKMEEEL 388 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 14/197 (7%) Query: 259 IVEKEAIINNHFERVLDGGLFFSAADVKKLY-SMYNSAFLDDLTKAMGRKSFDEDLKALP 317 + K I+N + L + + + + D+LT R F+ L+ Sbjct: 420 FLVKATEISNAYGDQYVSVLMTDITEEEHYKSQLEHLIIHDELTGVYNRHYFNRTLEQEI 479 Query: 318 EK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGD 371 ++ + D+D FK INDT+GH +GD VL+ + K + S + R GG+ Sbjct: 480 KRHQRYQSPFSMAFMDIDHFKMINDTYGHDVGDAVLVSLAKNISSLLRS-TDVFCRVGGE 538 Query: 372 EFAVIYTGGTLEELLSILKEIVHFQVG------SINLSTSIGVAHSNECPTVERLKMLAD 425 EF ++ +LE L I + I G ++ S+G+ N V+ AD Sbjct: 539 EFVIMMPETSLENALIISERIRSTVEGISSKDVPEKITISMGLVELNSWDNVQSFYKRAD 598 Query: 426 ERLYKSKKNGRAQISWQ 442 E LYK+K+NGR +I Q Sbjct: 599 EALYKAKENGRNRIETQ 615 >UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDS7_9PROT Length = 750 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 11/167 (6%) Query: 285 VKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTF 338 K + AF D LT R F LK + L D+D FK IND F Sbjct: 584 KKLSKQLETMAFYDKLTNIYNRAKFKNILKEFIEYSKRYKTPLSLIFLDIDYFKKINDNF 643 Query: 339 GHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV----H 394 GH GD VL ++VK+ K + + R+GG+EF ++ + + ++I Sbjct: 644 GHEKGDLVLKEMVKVAKLSLR-ESDVFGRWGGEEFLILLPNTDINGAKIVAEKIRDAIES 702 Query: 395 FQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 I ++ S+GV E T+E AD LY++KK GR ++ Sbjct: 703 HDFDGIKVTVSLGVTQLKEDDTIESFVNRADIALYQAKKEGRNRVVV 749 >UniRef50_B7K7K5 Diguanylate cyclase n=2 Tax=Cyanobacteria RepID=B7K7K5_CYAP7 Length = 648 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 24/218 (11%) Query: 248 LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRK 307 + LV+ + I + E+++ + + D+LT R+ Sbjct: 417 MGLVKSEGDHIIPSCQLYNLYFQEQLIKTERSEIEKLQHENEILKQLCSTDELTHLANRR 476 Query: 308 SFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVD 361 F+E L + L L DVD FK NDT+GHL GD L ++ K + Sbjct: 477 YFNEVLDKEWRRLARTFGPLSLILCDVDFFKAYNDTYGHLAGDFCLQEIAKTIYHCTYRP 536 Query: 362 KGKVYRFGGDEFAVIYTGGTLEELLSILKEIV---------------HFQVGSINL-STS 405 V R+GG+EFA+I + + ++I + N+ + S Sbjct: 537 CDLVARYGGEEFAIILPETDSAGAMIVAEKIRLSVKELAISQGKISPKIDLNEQNILTVS 596 Query: 406 IGVAHSNECPTVER--LKMLADERLYKSKKNGRAQISW 441 +GVA + ++ L AD LY+SK+NGR +++ Sbjct: 597 LGVACTIPNRRIDINLLIKAADNALYESKQNGRDRVTV 634 >UniRef50_B0TH60 Ggdef domain protein, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH60_HELMI Length = 414 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 68/281 (24%), Positives = 112/281 (39%), Gaps = 15/281 (5%) Query: 171 MDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCT 230 D + F G+P + E ++ + V + F + G Y Sbjct: 126 EDVRIVSHCGFAEGEPESLSEAFRESIAWQVLTTGQPFIHGDPGEYRRYRPSLANYVASI 185 Query: 231 LIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYS 290 + F ++ I+ S R ++ E I+ L + ++ Sbjct: 186 PLTFIKEVIGCINIHSMGP--RYLLTPSKAEILQILAGQAALALKNASMY-HQLKQQNEY 242 Query: 291 MYNSAFLDDLTKAMGRKSFDEDLKALP-EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMK 349 A D LT + F + L+ L E+ L LFD+D FK NDT+GH GDE+L + Sbjct: 243 FARQAVTDGLTGLYNHRYFQQCLQELMKERPVTLLLFDIDHFKGFNDTYGHPCGDEILRQ 302 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS---------- 399 + IL+SQ+ + R+GG+EFAVI L + ++I Sbjct: 303 IAHILRSQL-GPQEVAARYGGEEFAVILPDADLRRGIERAEQIRQAVANFCFRNPDRTLC 361 Query: 400 INLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 +N++ SIGV+ RL AD LY++K+ GR ++ Sbjct: 362 LNITVSIGVSEKLAGWDKSRLIEAADRALYRAKEQGRNRVC 402 >UniRef50_Q0F307 Sensory transduction system regulatory protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F307_9PROT Length = 432 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 19/193 (9%) Query: 268 NHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE-------KG 320 H ++ L + + + ++ D LT+ R+ FD L + Sbjct: 239 RHNRAIVSERLKLISELQEMNDKLERYSYQDGLTRVANRRMFDTLLDREWAAARRGGGRQ 298 Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 L + D+D FK NDT+GHL GD+ L ++ L + R+GG+EF ++ Sbjct: 299 LALVMIDIDYFKLYNDTYGHLAGDDCLKRIAAALSRVSKRTTDLIARYGGEEFVLLLPNT 358 Query: 381 TLEELLSILKE-IVHFQVGSIN---------LSTSIGVAHSNECPTVER--LKMLADERL 428 E+ S+ ++ + I ++ S+GV T++ L +AD L Sbjct: 359 GREQAHSLAEQCLRDIAALQIPHSQSEAAEVVTISVGVTTMAPDATMQAAMLIEMADRAL 418 Query: 429 YKSKKNGRAQISW 441 Y++K++GR ++ Sbjct: 419 YRAKESGRNRVEV 431 >UniRef50_A1WTZ7 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Proteobacteria RepID=A1WTZ7_HALHL Length = 308 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 76/195 (38%), Gaps = 21/195 (10%) Query: 265 IINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK----- 319 I R+ + +K ++ + D LT R+ D L + Sbjct: 111 ITKPFSPRITRTRVRNHVDLKRKTDALERLSQRDGLTDLPNRRVLDRQLPEEWSRCQRGD 170 Query: 320 -GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYT 378 + + D+D FK ND +GH GDE L +V ++L + V R+GG+EF + Sbjct: 171 TPLSVIMMDIDHFKPYNDHYGHGAGDECLRRVARVLANVPSRTTDLVARYGGEEFIALLP 230 Query: 379 GGTLEELLSILKEIV-----------HFQVGSINLSTSIGVAHS---NECPTVERLKMLA 424 + + + H I ++ S+GVA + E+L A Sbjct: 231 YTDAPDAWQMAERFRAAVAALQLPHGHSSTDGI-ITMSVGVASHTADRPYDSPEQLLEAA 289 Query: 425 DERLYKSKKNGRAQI 439 D+ LY +KK GR ++ Sbjct: 290 DQALYAAKKAGRNRV 304 >UniRef50_B7KGV0 Response regulator receiver modulated diguanylate cyclase n=3 Tax=Chroococcales RepID=B7KGV0_CYAP7 Length = 465 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 115/299 (38%), Gaps = 29/299 (9%) Query: 169 LAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRV 228 + S L+ S+ + +N++ + + P + K + + Sbjct: 150 ILYQSRALIKSVLNSSLDGIAALQAIRNSLGEIVD-FRCLLVNPVMAKIIGQKTENLIGK 208 Query: 229 CTLIIFFAALVA-VISGASCLYLVRRVINRGIVEKEAIINNHFERVLD------GGLFFS 281 L F + L +++ + + + ++ + + + Sbjct: 209 IMLKKFLSNLDPKLMNAFIEVVNTGNTLEKEFYYQKDNVERWYHFIALKLGDGFSITVRD 268 Query: 282 AADVKKLY-SMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNI 334 + K + ++ A LD LT R+ F+E L ++ L L D+D FK Sbjct: 269 ITERKLMELKLHQLARLDGLTGVANRRYFEETLAKEWKRGIRDKQPLSLILCDIDYFKIY 328 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH 394 NDT+GHL GDE L++V K + + V R+GG+EF +I T + ++I + I Sbjct: 329 NDTYGHLKGDECLIRVAKAINRAVKRSTDLVARYGGEEFGIILTNTERQGAIAIAQSIQK 388 Query: 395 F------------QVGSINLSTSIGVAHSNECP--TVERLKMLADERLYKSKKNGRAQI 439 + ++ S+GVA + + L AD+ LY++KK GR I Sbjct: 389 AVNQLKIPHPNPREKNHHYIAMSLGVASLIPQKKLSPKILVASADKALYEAKKQGRNCI 447 >UniRef50_B5W3I1 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Arthrospira maxima CS-328 RepID=B5W3I1_SPIMA Length = 1041 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 97/243 (39%), Gaps = 25/243 (10%) Query: 215 LYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVL 274 F + + L+ + I+ E + + L Sbjct: 793 WQKFQGPTHLIFPIWLEAEQLWGLLIAYFSSEDNNYKPAEIDMLKQLTEQLAIAIQQGEL 852 Query: 275 DGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALP------EKGGYLCLFDV 328 L + +++K+Y++ D LT R+ FD L+ ++ + + D+ Sbjct: 853 YHQLQIAHEELEKVYNL------DSLTGIANRRHFDHILQQEWLQLQREKQPLSIIMCDI 906 Query: 329 DKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSI 388 D FK NDT+GH+ GD+ L +V +K+ + + V R+GG+EF ++ +E L I Sbjct: 907 DYFKCYNDTYGHIAGDKCLQRVANAIKNSLKRPRDLVARYGGEEFVILLPNTPIEGGLEI 966 Query: 389 LKEIVHF-----------QVGSINLSTSIGVAH--SNECPTVERLKMLADERLYKSKKNG 435 ++I ++ S+G+A + + +L AD LY++K NG Sbjct: 967 SQQIQEAVFKLNMQPGAIPANFQRVTVSMGIASKIPSHKQSPTQLLFDADRALYQAKNNG 1026 Query: 436 RAQ 438 R Q Sbjct: 1027 RNQ 1029 >UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepID=Q2W5X6_MAGSA Length = 317 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 12/203 (5%) Query: 250 LVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSF 309 L+ R + A+ + + A K + ++ D LT R+ Sbjct: 116 LIDWFDGRRVKHSVAVDIGALKNAQNELSEAYAMLALKSVELEKASITDALTGLFNRRRL 175 Query: 310 DEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKG 363 DE ++ L + DVD FK++ND GH +GDEVL + +L+ + Sbjct: 176 DESFAHELDRAQRYAEPVSLIISDVDHFKSVNDIHGHHVGDEVLQAMAGLLRHGVRA-LD 234 Query: 364 KVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQV-----GSINLSTSIGVAHSNECPTVE 418 V R+GG+EF +I L+ ++ +++ G S S GVA + + + Sbjct: 235 VVGRWGGEEFLIICPNTDLDGATALAEKLRAAIASAQFPGIGTSSASFGVAQYQDGESFK 294 Query: 419 RLKMLADERLYKSKKNGRAQISW 441 AD LY++K NGR +I + Sbjct: 295 DTVARADTALYRAKVNGRNRIEY 317 >UniRef50_A3WKY3 Putative uncharacterized protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WKY3_9GAMM Length = 363 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 78/332 (23%), Positives = 130/332 (39%), Gaps = 31/332 (9%) Query: 118 IMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLM 177 ++ V+ + D V SL++L+ +R L L + + L+ Sbjct: 37 LLAVINLAVFGDPVLALLDALGAV-------IAASLLYLVKRKRLLELVSWLFVLTLGLL 89 Query: 178 FSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAA 237 + F + + A+F P ++ + +L V IF Sbjct: 90 ITAFLS-LAAGSNNGYLWTAVFP-----------PFAFFLLGKTRGFWLTVVFFTIFLIQ 137 Query: 238 LVAVISGASCLYL-VRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAF 296 L I YL + +N V +++ F + + + A Sbjct: 138 LYISIFVKQVPYLSLGGFLNTLEVFVISLLLYRFYEKTRTEANELLQE--QSIRLEKMAK 195 Query: 297 LDDLTKAMGRKSFDEDL----KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 D LT+ R+ D L K + L DVD FK IND GHL GDEVL+K+ + Sbjct: 196 TDKLTQLYNRQYLDVTLFSLYKERRTLPISVLLLDVDLFKRINDEHGHLFGDEVLVKMAQ 255 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI--NLS--TSIGV 408 L + D V R+GG+EF +I + + L + + + SI +++ SIGV Sbjct: 256 RLTEVVR-DDDVVGRWGGEEFLIIAPNTSKSDALGLAERVRRSLNMSITESVTTSVSIGV 314 Query: 409 AHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + ++ + E L AD LY++K NGR Q+ Sbjct: 315 SSADRVKSPEELISQADRALYQAKSNGRNQVC 346 >UniRef50_Q2SPL3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL3_HAHCH Length = 373 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 129/358 (36%), Gaps = 28/358 (7%) Query: 108 KEFEKNYCADIMQVVKYRHVKNTGFIS----FDGKTFVYYLYPVTHN----RSLIFLLGL 159 + Y ++ + T ++ G + Y +L L Sbjct: 8 RIKSHQYIRKRRTLMTFGSYFLTFAVAMAGWSSGLLELRYAVHFLIMSVAINGGFYLCFL 67 Query: 160 ERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKN---AIFTVSEAMEHFAYLPTGLY 216 ++L K + E ++ SLF + + N A+ + + + T Y Sbjct: 68 SNWNLRRKDPNLTEEQMLISLFPPLYVMYFMDDNQARSALAMVAIIPLLYGILGIDTKRY 127 Query: 217 VFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDG 276 + + L + +++ S L+ + ++ + A+I ++ Sbjct: 128 IRVAAAYFGGYLGLLGLLLWQKPRLVTPNSEFVLLTALF--MVMAQMALIGGFISKLRAS 185 Query: 277 GLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDK 330 + + L + A D+LT R+ + L + LCL D+D Sbjct: 186 LRVKNHQLNEALEKISVMASTDELTGLCTRRELMKQLSNEFSRCRRSSGALSLCLLDIDH 245 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK 390 FK IND++GH GD VL KV + ++S + + R+GG+EF +I L+ + Sbjct: 246 FKRINDSYGHQAGDAVLKKVAQTMQSLVRSI-DCLGRYGGEEFLLILPQTPLDGAFITAE 304 Query: 391 EIVHFQVG--------SINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + + ++ S+G A E +E L D+ LY +K GR ++ Sbjct: 305 RLRRAVMDIPFPEVAPEFRVTISLGAAELEEGEAMETLISRVDKALYAAKGAGRNRVV 362 >UniRef50_A4W9V5 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638 RepID=A4W9V5_ENT38 Length = 473 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 75/359 (20%), Positives = 131/359 (36%), Gaps = 31/359 (8%) Query: 105 IQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSL 164 +Q NY + M R+V + G F++ P+T + GL F+L Sbjct: 102 MQPGMPHVNY-SGAMIFFMMRNVMMAVLFTLAGVLFIFRHSPLTRLMRHLIFAGLLVFTL 160 Query: 165 LSKSLAMDSENLM----FSLFKNGKPVTGDEYNAK--NAIFTVSEAMEHFAYLPTGLYVF 218 ++A L N + A+ + + T L Sbjct: 161 TMVTVAWFYSGHSELFPLDLINNTTRQFTALWKQIINGALIILWLIALTTLLIITRLRNL 220 Query: 219 AYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGL 278 + +L C +II L A G S Y + + E A + + D Sbjct: 221 FWASGTFLCTCYVIILITLLPADFIGGSVWY------SARLFETTASLLIILTLLHDVFS 274 Query: 279 FFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALP-----EKGGYLCLFDVDKFKN 333 + + +K Y ++ D LT+ R F E L + + D+D FK Sbjct: 275 LYRNSHIK-YQQSYQNSIRDALTRLYNRSYFYESLNQALGKITDSHPVSVIVCDLDYFKR 333 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 IND +GHL GD+VL V +L + + R GG+EF ++ + E + + I Sbjct: 334 INDNYGHLQGDKVLQFVANLLMDSVR-PQDITARIGGEEFVLLLSNTHSEAARLVAERIR 392 Query: 394 -------HFQVGSI---NLSTSIGVAHSNECP-TVERLKMLADERLYKSKKNGRAQISW 441 + +++ S+G+ + P T E AD+ +Y++K+ GR ++ Sbjct: 393 LSLSSFDRITTEGMLPESVTISMGIYTATTLPVTAEECVERADKAMYEAKETGRNRVVV 451 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 61/324 (18%), Positives = 119/324 (36%), Gaps = 22/324 (6%) Query: 128 KNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPV 187 +F F+ Y + + +L+ ++ + F + Sbjct: 28 GTIALYTFSFIHFIGKEY--SIALFEFIVATGAVLNLILLKVSDGKLIRVAENFILIGMI 85 Query: 188 TGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASC 247 + + + Y ++ + ++ + +I ++AV++ + Sbjct: 86 ILLTGIIIHGGIANTAIYWIYTYPLLSFFLKGNRVGLFWNIT--LIVVIVILAVLNKLNI 143 Query: 248 LYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRK 307 + + ++ V + L S + A D LT A R Sbjct: 144 VPIPYSPDEIRQALSAYVVIMVLAYVFESALLSS------YEKIKKLATTDPLTGAFNRY 197 Query: 308 SFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVD 361 + L+ E+ L +FD+D FK+INDT+GH +GD+VL + +K+ I Sbjct: 198 QLFKKLEEEIERSKRYGNHLSLIMFDIDNFKSINDTYGHNIGDQVLKITIDTIKNHIR-K 256 Query: 362 KGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF-----QVGSINLSTSIGVAHSNECPT 416 + RFGG+EF +I G E +I ++I G ++ S+GVA + Sbjct: 257 TDTLGRFGGEEFMIICPGINDEGARNIAEKIRKLVKDIKVEGIPEITISVGVAEYFPDES 316 Query: 417 VERLKMLADERLYKSKKNGRAQIS 440 + AD LY +KK G+ ++ Sbjct: 317 ITDFIKKADIALYSAKKKGKNRVE 340 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 53/224 (23%), Positives = 92/224 (41%), Gaps = 24/224 (10%) Query: 234 FFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYN 293 F ++A LY I+ + + + L S A++K ++ Sbjct: 1121 FCVPMMAQGKALGILY-----ISSPQLGQLTEAKQRLALTVAEHLALSLANLKLRETLSQ 1175 Query: 294 SAFLDDLTKAMGRKSFDEDLKALP------EKGGYLCLFDVDKFKNINDTFGHLLGDEVL 347 + D LT R+ +E L+ ++ + + D+D FK+ NDTFGH GD VL Sbjct: 1176 QSIRDALTGLFNRRYMEESLEREIHRAQRHQRPMGIIMLDIDHFKHFNDTFGHEAGDAVL 1235 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSIN------ 401 ++ L+ I R+GG+E +I +L + ++I H V + Sbjct: 1236 RELGIFLQRSIRA-SDIACRYGGEELMLILPDASLADTKQRAEQIRH-DVKGLQIEYHHK 1293 Query: 402 ----LSTSIGVAHS-NECPTVERLKMLADERLYKSKKNGRAQIS 440 ++ S+GVA T + L AD LY++K GR ++ Sbjct: 1294 LLDAIAISVGVAAFAEHGSTAQELIAAADRALYQAKAQGRDRVV 1337 >UniRef50_A3IMR3 GGDEF family protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IMR3_9CHRO Length = 509 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 68/302 (22%), Positives = 115/302 (38%), Gaps = 30/302 (9%) Query: 157 LGLERFSLLSKSLAMDSENLMFSLFK--NGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTG 214 +G+E+ LL ++ ++ EN + + +G G + K AIFT + + Sbjct: 194 IGIEQDILLKEAGILNKENDLEYSIRGYDGLGEKGQFFWGKEAIFTNNPVSLNVTLPNGS 253 Query: 215 LYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVL 274 + A + +++ +I+ + L + + + Sbjct: 254 WQLAAIPVHGWPFYSLSMLWITIGGIIIAFLTGLLIF----------SLTKTLLQLNQEI 303 Query: 275 DGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDV 328 K + A LD LT+ R FD LK + L L DV Sbjct: 304 KERKEVELQLTKTNKELSKLASLDGLTQIANRYYFDTYLKKEWNRLSRQREPLSLILCDV 363 Query: 329 DKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSI 388 D FK ND +GH GDE L +V K ++ RFGG+EFA+I L+ + + Sbjct: 364 DYFKKYNDRYGHPQGDECLKQVAKAIEKAAQRPADLAARFGGEEFAMILPKTNLDGAIKV 423 Query: 389 LKEIVHFQVG----------SINLSTSIGVA--HSNECPTVERLKMLADERLYKSKKNGR 436 K + + + ++ SIG+A H + + ++L AD LY+SK GR Sbjct: 424 AKNLQKYISNLKLEHKQSQINQYITLSIGIAHTHCHPFYSSQKLIDAADHALYRSKNKGR 483 Query: 437 AQ 438 Sbjct: 484 NC 485 >UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNC9_9BACT Length = 494 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 12/201 (5%) Query: 251 VRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFD 310 V I+ G ++ + I + ++ + A D LT R+ D Sbjct: 293 VMSEISSGASDEISYICEALKDMILVLKDKMENIQSYSDRLEYLANRDSLTGLWNRRKMD 352 Query: 311 EDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGK 364 + L + E+ + + D+D FKN+ND FGH +GD VL + ++K+ Sbjct: 353 QILLSETERSSRYGSSLSVVMVDIDHFKNVNDNFGHEVGDTVLSSIAALMKNCTRA-GDS 411 Query: 365 VYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS-----INLSTSIGVAHSNECPTVER 419 V R+GG+EF V+ ++ L + + + I +++S GV V Sbjct: 412 VGRWGGEEFLVVLPETDVKGALEYAERMRSAVEDNVFHDDIRITSSFGVTQYRSGEPVNE 471 Query: 420 LKMLADERLYKSKKNGRAQIS 440 ADE LY +K+ GR ++ Sbjct: 472 FVARADEALYDAKEKGRNRVE 492 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 19/204 (9%) Query: 252 RRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDE 311 + ++NRG+V + + G + + A +D LT R+ F E Sbjct: 386 KWLLNRGMVISRSSDGKPLR--MIGTSTDITERKQLEEELKRQARIDFLTGVSNRRYFME 443 Query: 312 DLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKV 365 + ++ + D+D FK +NDT+GH GD VL ++ + + + + + Sbjct: 444 QAEQEIQRTSRYDTPLSFFMLDIDLFKQVNDTYGHKSGDIVLKRMASVCRETLR-EIDII 502 Query: 366 YRFGGDEFAVIYTGGTLEELLSILKEIVHF---------QVGSINLSTSIGVAH-SNECP 415 R GG+EFA++ + + + + I + SIGVA + Sbjct: 503 GRVGGEEFAILLPETDKAQAAEVAERLRSVLADEKVPTEAGAPIQFTVSIGVASRVSSQD 562 Query: 416 TVERLKMLADERLYKSKKNGRAQI 439 ++ L LADE LY++KK GR ++ Sbjct: 563 NIDMLLNLADEALYQAKKYGRNRV 586 >UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21PN7_SACD2 Length = 565 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 15/192 (7%) Query: 261 EKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK- 319 + + + S +L A D LT R++++E + Sbjct: 370 QSLSAQLKALMDRVKTVEEESEKSRAQLEEQRYKATHDPLTSLPNREAYNERAFHELHRF 429 Query: 320 -----GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFA 374 L + D+D FK INDTFGH GD+VL V +++ +++ + V R+GG+EF Sbjct: 430 KRYGHPLTLAVCDLDHFKKINDTFGHQAGDKVLKLVAQVVSTRLR-NVDFVARYGGEEFV 488 Query: 375 VIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVERLKMLADE 426 ++ E+ ++L ++ F+ + ++ S G+ +VE AD+ Sbjct: 489 LVMPETDAEQAKTVLDKMRAAIAKTPFRFKDSPVTITMSFGIVQFRGEDSVESAFARADK 548 Query: 427 RLYKSKKNGRAQ 438 LY++K NGR Q Sbjct: 549 ALYEAKANGRNQ 560 >UniRef50_B9MBS6 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Comamonadaceae RepID=B9MBS6_DIAST Length = 890 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 19/182 (10%) Query: 277 GLFFSAADVKKLYSM-YNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVD 329 F + + + + AF+D LT R+ D LKA + + + D+D Sbjct: 704 ATFVDVTEQRAQHELLRKLAFMDGLTGLANRRQLDRTLKAEWRRCRRSGQPLSVVMVDID 763 Query: 330 KFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSIL 389 FK ND +GH GD+ L V L+ + V R+GG+EF + L+ + Sbjct: 764 HFKQFNDLYGHQQGDDCLRAVAAALRGGLGRSHDLVARYGGEEFVCLLPECDLDGARAKA 823 Query: 390 KEIVH--------FQVGSIN--LSTSIGVAHSNEC--PTVERLKMLADERLYKSKKNGRA 437 + + + I ++ S GVA T E+L AD LY++K GR Sbjct: 824 QALCRAVHARQMEHRGSPIAPVVTVSAGVACVVPGAEDTPEQLLARADANLYRAKAAGRN 883 Query: 438 QI 439 ++ Sbjct: 884 RV 885 >UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID=Q30QX5_SULDN Length = 564 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 119/312 (38%), Gaps = 21/312 (6%) Query: 151 RSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAY 210 +L + + + + SL + + +++ A+ F + Sbjct: 251 LALFIQTIFKTKEQYINEHKLLNSIIFVSLANFIYGLIDFNSALEIMSSSLTYALIVFMW 310 Query: 211 LPTGLYVFAYKKDVYLRVC---TLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIIN 267 + + K + LI AL+ + A Y+ + G++ + +++ Sbjct: 311 ISIRICKKGDKLIKIFLIAHTLYLIFSVYALLYYLGIADANYISSHGTSIGLIIEAMLLS 370 Query: 268 NHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDE------DLKALPEKGG 321 + K + A D +TK R+ F E L + Sbjct: 371 YLVSYKFIIMEQEKEEEKLKQIELKLLASTDSMTKLYNRRYFTEISAKVLHLSKREKNNL 430 Query: 322 YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT 381 + + D+D+FK +NDT+GH GDEVL+ + ++L V R+GG+EF ++ + Sbjct: 431 SILMIDIDRFKVVNDTYGHQFGDEVLIALSRLLVEH-QRKSDIVCRYGGEEFVILLPNTS 489 Query: 382 LEELLSILKEIVHFQV---------GSINLSTSIGVAHSN--ECPTVERLKMLADERLYK 430 L++ +I ++I + SIGVA + ++ AD+ LY+ Sbjct: 490 LKDATNIAQKIRILVESLTMEAPTNKEFKFTISIGVAQIDVEHEDDIKFALKRADDALYR 549 Query: 431 SKKNGRAQISWQ 442 +K +GR ++ + Sbjct: 550 AKNSGRNRVCAE 561 >UniRef50_B6BGM9 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGM9_9PROT Length = 334 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 13/209 (6%) Query: 245 ASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFF-SAADVKKLYSMYNSAFLDDLTKA 303 ++ +++N +EKE I N ++ + L ++ K + A D LT Sbjct: 127 HEFFLVLSKMLNDISIEKENIENIKNIKLSNIKLEEKIQQELSKNIELNALAITDKLTGL 186 Query: 304 MGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQ 357 R D+ L K + D+D+FK INDT+GH +GD+VL ++LK+ Sbjct: 187 YNRVKLDKVLDLEINKMVKLQAEISIIFIDIDRFKPINDTYGHQIGDKVLQSFSQVLKNN 246 Query: 358 IPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS-----INLSTSIGVAHSN 412 I V R+GG+EF +I +E L + + + + L+ S GVA Sbjct: 247 IR-KTDIVGRWGGEEFLIICHEANIEGSLHLAENLRKIIENTSFEYIKELTASFGVASFE 305 Query: 413 ECPTVERLKMLADERLYKSKKNGRAQISW 441 + +++ L AD+ LYK+K NGR ++ + Sbjct: 306 DGDSIDSLVERADKALYKAKHNGRNKVCF 334 >UniRef50_A9FZW1 FHA domain protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FZW1_SORC5 Length = 299 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 16/178 (8%) Query: 278 LFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALP------EKGGYLCLFDVDKF 331 L + + + +Y +D LT+ ++ E L+ E+ + LFD+D F Sbjct: 122 LSGADVEAQYHEEIYRMTIIDGLTQIHNKRYLYEALEREIIRGRRHERDLAILLFDIDHF 181 Query: 332 KNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL------ 385 K IND GHL GD VL +V +I++S+I D+ R+GG+EFA+I ++E Sbjct: 182 KRINDVHGHLAGDFVLKEVARIVQSRIRRDE-VFARYGGEEFAIILPETSIEGAAALGET 240 Query: 386 --LSILKEIVHFQVGSINLSTSIGVAHSNECP-TVERLKMLADERLYKSKKNGRAQIS 440 + + + FQ SI ++ S+GVA E T L ADERLY +K +GR ++ Sbjct: 241 LRQKVAEHLFVFQADSIRVTISVGVALLQEGDRTANDLIKRADERLYHAKNSGRNRVC 298 >UniRef50_Q1K485 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K485_DESAC Length = 370 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 78/202 (38%), Gaps = 18/202 (8%) Query: 255 INRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL- 313 + E ER+ + K+ + A D LT + R F+E Sbjct: 162 LLLSTYEGALQQKRELERMNEQLNEALDTIKKRNAEIAELAVRDSLTGSFNRGYFNETFP 221 Query: 314 -----KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRF 368 ++ L + D+D FK IND +GH GD V+ V + L + + R+ Sbjct: 222 GAIRRAQRYQQSLSLIMCDIDHFKLINDHYGHQTGDRVIKSVAQGLAQSLRQGVDWLARY 281 Query: 369 GGDEFAVIYTGGTLEELLSILKEIVHF--------QVGSINLSTSIGVAHSNECP----T 416 GG+EF ++ LE L + + + SI L+ S GVA + T Sbjct: 282 GGEEFVIVLPETNLEGALVVAERMRRSIADQEIACDPQSIRLTASFGVAGCDPEHASMLT 341 Query: 417 VERLKMLADERLYKSKKNGRAQ 438 + AD LY++KK GR Sbjct: 342 GNGMIAAADRCLYQAKKEGRNC 363 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 16/167 (9%) Query: 287 KLYSMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTFGH 340 + ++ +D LT R+ + E EK + D+D FK INDT+GH Sbjct: 154 LNEELKTASRVDGLTGLYNRRYWQERFDEMHKLCVRREKPSTALMLDIDHFKRINDTYGH 213 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV------- 393 GD+V+ + ++K + + R+GG+EFA+I ++E+ + + I Sbjct: 214 QAGDKVIKMLAALIKRCVR-ETDLAGRYGGEEFAIILNDSSVEDAKIVAERIRQLAQRLV 272 Query: 394 -HFQVGSINLSTSIGVAHSNEC-PTVERLKMLADERLYKSKKNGRAQ 438 + SI+ + S+G+A + AD+ LY++K+NGR Q Sbjct: 273 VEHEGESISFTVSLGLAQFSPDFKGAMAWLECADQALYEAKENGRNQ 319 >UniRef50_C6RRW8 Diguanylate cyclase n=6 Tax=Acinetobacter radioresistens RepID=C6RRW8_ACIRA Length = 524 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 137/344 (39%), Gaps = 17/344 (4%) Query: 107 VKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLS 166 + EKN +D++ +Y + KN ++ + +++ + L + ++ Sbjct: 184 INLNEKNIISDLLAS-EYGYKKNYMYVIDQSRQIIFHPDSARIGSIMTNNTALSYMNQIN 242 Query: 167 KSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYL 226 + + ++ + + + E + +Y + ++ Sbjct: 243 RGRVELINSRGIENLAGFARISTTNW----IVVSQQPTRELLKQANSVIYKVSVVILLFY 298 Query: 227 RVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHF---ERVLDGGLFFSAA 283 + L+I+ +L + R+ I +K I+ + ++ L + Sbjct: 299 LLIFLVIWKLSLFISSPLNHLAKMASRLNQPEIEQKIQAISPWYYEVQKFKLSLLLSAQN 358 Query: 284 DVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK--GGYLCLFDVDKFKNINDTFGHL 341 KK+ M + D LT R+ D +K + + + L DVD FK INDT+GH+ Sbjct: 359 FSKKISEMNHHVNSDPLTGLYNRRGIDIFIKEMVDNHTPFSILLIDVDYFKKINDTYGHI 418 Query: 342 LGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI- 400 GD VL ++ L++ D R GG+EFAV+ + + + + + +I Sbjct: 419 QGDIVLKQIAGHLRTNFRKD-DICCRCGGEEFAVLMPTIDKKAVYNSAERLRKKIESNIT 477 Query: 401 ----NLSTSIGVAHS-NECPTVERLKMLADERLYKSKKNGRAQI 439 ++ SIG+A+ + E + +AD LY++K+ GR + Sbjct: 478 NLSGPVTISIGIAYWPESSKSTEEVFKIADHYLYQAKREGRNCV 521 >UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D439_DEIDV Length = 633 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 92/217 (42%), Gaps = 19/217 (8%) Query: 239 VAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLD 298 V +++ + L+ + G + + + +++ S+ + D Sbjct: 412 VPMLAQGETVGLLH--LEAGSAAPLTRRQERLAQTVAETAALAIVNLRLRESLRQQSIRD 469 Query: 299 DLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 LT R+ +E + + + + D+D FK+ ND+ GH GDE+L + + Sbjct: 470 PLTGLYNRRYLEESFERELHRAQRSDDPIAVIMLDIDHFKHFNDSHGHEAGDELLRALGQ 529 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI---------NLS 403 +L I + R+GG+EFA+++ G TL++ ++ H + +S Sbjct: 530 LLSGCIRAE-DVACRYGGEEFAMVFPGMTLDQATRWADQLRHTVESTQFASRGEALEQVS 588 Query: 404 TSIGV-AHSNECPTVERLKMLADERLYKSKKNGRAQI 439 S+GV A + L AD LY++K+ GR ++ Sbjct: 589 VSLGVAAFPQHGRHLADLIRAADAALYRAKREGRNRV 625 >UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=Cyanothece RepID=B7JZG8_CYAP8 Length = 668 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 20/219 (9%) Query: 239 VAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLD 298 + +I+ L L+ +N VE H + + + A++K ++ + D Sbjct: 446 IPMIAHGETLGLLY--LNLSNVELFNPSQQHLAEAVSKQIAIAFANLKLRETLEEQSLRD 503 Query: 299 DLTKAMGRKSFDEDLKALPEK-------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 LT R+ + + L + D+D FK ND FGH GD VL V Sbjct: 504 PLTGLFNRRYLEISINRELNTIIQDQDYSLGLIMLDIDHFKQFNDNFGHEAGDLVLQTVA 563 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSI-NL 402 L++ I RFGG+EF +I +L + L ++I ++ + ++ Sbjct: 564 NCLQNHIR-QSDIACRFGGEEFMIILPRASLNKTLERAEKIRESIKQLKIEYKSQPLDSI 622 Query: 403 STSIGV-AHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + S GV A T+ L + AD+ LY++KK GR ++ Sbjct: 623 TASFGVAAFPQNGTTLHELFIDADKALYQAKKQGRDRVV 661 >UniRef50_Q21GM6 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21GM6_SACD2 Length = 443 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 64/336 (19%), Positives = 113/336 (33%), Gaps = 27/336 (8%) Query: 126 HVKNTGFISFDG-----KTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLM--F 178 + T I + G + ++ P + + L + L + + F Sbjct: 105 YTNMTVHIKYTGPPKGLRIYLRNRSPNYYVLGNLNSTKYNTVELTNAELNKITRFKLADF 164 Query: 179 SLFKNGKPVTGDEYNAKNAIF--TVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFA 236 + F V ++ L G Y + + Sbjct: 165 GVADWWLASHSVPVEFSQPEFNDVVLFEIQTGTSLKDGTYNIELTEVSWSGPIVSQEVLY 224 Query: 237 ALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAF 296 + ++ A L+ R ++ + E + L A Sbjct: 225 RAIVILWAAVVFSLLIYRQVRLNIQLKQKAQQQEELININKLLNLQT-----QKFEELAK 279 Query: 297 LDDLTKAMGR---K-SFDEDLK--ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKV 350 D LT R + E L + L L D+D FK NDT GH +GD+VL Sbjct: 280 TDMLTGVANRLGVREYLFEGLNNWRNNQSPFSLILIDIDHFKLFNDTHGHDVGDKVLKGA 339 Query: 351 VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH-----FQVGSINLSTS 405 +I ++ + + V R+GG+EF VI + ++ + + + ++ S Sbjct: 340 AEIFRNSVR-NTDLVARWGGEEFIVICPNTDTHQATTVAENLRTRLASAEIFNGLKVTAS 398 Query: 406 IGVAHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 GVA N P++E L ADE LY +K+ GR ++ Sbjct: 399 FGVASMN-TPSLEHLFKQADEALYSAKEAGRNKVVV 433 >UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8J1_ALHEH Length = 689 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 12/173 (6%) Query: 279 FFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFK 332 +A + + A D LT R E ++ L LFD+D FK Sbjct: 515 LLNAQLTEANRRLKRQATTDSLTGVWNRYRMQEQIELERGAHERYGTPCSLLLFDIDHFK 574 Query: 333 NINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI 392 +ND +GH GD+VL+ + + + ++ + R+GG+EF V+ T EE ++ + + Sbjct: 575 AVNDQYGHEAGDQVLVALARAVVGELRA-TDFLGRWGGEEFIVLATNSAPEEAWTLAERL 633 Query: 393 VHFQV-----GSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 G ++ S+GVA + TV+RL AD +Y++K+ GR ++ Sbjct: 634 RQCIAGLRFPGVGPVTISVGVASLSRGDTVDRLIDRADRAMYRAKQRGRNRVE 686 >UniRef50_B8J4U6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J4U6_DESDA Length = 324 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 10/170 (5%) Query: 279 FFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL---KALPEKGGYLCLFDVDKFKNIN 335 + + ++ S+ D LT RK D L L +K + DVD FK IN Sbjct: 138 SQLDSMITRVRQADESSLTDALTGLYTRKYLDMVLGRYTRLEKKPFCCIMLDVDHFKQIN 197 Query: 336 DTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF 395 D+FGHL+GD VL V ++++ + + V R+GG+EF V+ G LE+ + I Sbjct: 198 DSFGHLVGDSVLKDVAQVIRRCVR-EMDTVCRYGGEEFVVLMPGSLLEQAEQAAERIRRA 256 Query: 396 QVGSIN------LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 G I+ ++ S+G + ++ AD+ LY +K++GR ++ Sbjct: 257 VSGMISGPDSRPVTVSLGCSEYEMDEDALQVLHRADKALYGAKRSGRNRV 306 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 15/159 (9%) Query: 295 AFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLM 348 A D LT R+ E ++ + + D+D FK +NDT+GH +GD+VLM Sbjct: 312 ATTDPLTGIANRRYALEQAALEIKRNQRTGTPLSVVMMDIDHFKKVNDTYGHHVGDQVLM 371 Query: 349 KVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQ--------VGSI 400 +V + +S + V RFGG+EF ++ L + ++I G++ Sbjct: 372 EVAQTCRSHCR-ESDLVSRFGGEEFLILLPSTNLNGAQTHAEKIRQAIEDLSFPTAEGNV 430 Query: 401 NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 +++ S GV+ ++R+ AD LY++K +GR + Sbjct: 431 SVTASFGVSQWQGETKIDRVVSRADAALYQAKHDGRNCV 469 >UniRef50_C6CT46 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT46_PAESJ Length = 324 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 70/307 (22%), Positives = 122/307 (39%), Gaps = 24/307 (7%) Query: 148 THNRSLIFLLGLERFSLLSKSLAM---DSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEA 204 + N++L+ +LG +R LL + + + + F + + + F + Sbjct: 23 SVNQTLLTMLGYDREELLERHIESTMSVANKMFFHTYFYPYIRLYGQVDEMYFSFRTKDG 82 Query: 205 MEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEA 264 + L K +I AL +++ ++ ++ Sbjct: 83 KDLPVLLNGIRRNRDGKA---------VIDCVALEMRKRIEHEKDIMKTKQQLEVLYQQT 133 Query: 265 IINNHFERVLDGGLFFSAADV-KKLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALP 317 NH +L ++ + A D LT R+ F E L+ Sbjct: 134 NEANHRLELLHAQYEKKQQELLDLNEKLEALASTDPLTGLKNRRYFQEQLQKYTELSEQT 193 Query: 318 EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIY 377 E LC+ D+D+FK+INDT+GH +GD VL ++ ++L+ Q D V RFGG+EF ++ Sbjct: 194 EAALSLCIVDIDRFKSINDTYGHPVGDLVLTRLAQLLQEQ-SPDGAVVARFGGEEFVILL 252 Query: 378 TGGTLEELLSILKEIVHFQV----GSINLSTSIGVAHSNECPTVERLKMLADERLYKSKK 433 E+ L + G + ++ SIG A T L AD+ LY SK Sbjct: 253 PELDQEQALVAAERYRAATETTPLGDLRITISIGTATFAAAETELSLLQQADQALYHSKN 312 Query: 434 NGRAQIS 440 NGR +++ Sbjct: 313 NGRNRVT 319 >UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7QLL5_CYAP0 Length = 494 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 14/191 (7%) Query: 262 KEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK-- 319 K + + + + A++K ++ D LT R+ +E LK E+ Sbjct: 292 KLTEVKQLLATNVTRHISLALANIKLCETLKQQNIRDALTGLYNRRYLEESLKKELERAK 351 Query: 320 ----GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAV 375 + + DVD FKN+NDTFGH GD+VL K+ L+ I R+GG+E + Sbjct: 352 RKERSLGIIMIDVDHFKNVNDTFGHDKGDQVLKKLGGFLQRHIR-GSDIACRYGGEELTL 410 Query: 376 IYTGGTLEELLSILKEIVHFQVG------SINLSTSIGVAH-SNECPTVERLKMLADERL 428 I +LE +++ L+ S+G+A + + L AD+ L Sbjct: 411 ILPEASLENTRQRAEQLRQAVKNLDLDLCDHTLTISVGIACFPEHGYSGKALLKTADQAL 470 Query: 429 YKSKKNGRAQI 439 Y++K+ GR ++ Sbjct: 471 YQAKQQGRDRV 481 >UniRef50_B1J820 Diguanylate cyclase n=1 Tax=Pseudomonas putida W619 RepID=B1J820_PSEPW Length = 532 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 65/336 (19%), Positives = 116/336 (34%), Gaps = 20/336 (5%) Query: 119 MQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMF 178 + + Y+ F+ DG + + +P + +S +L ++ L Sbjct: 190 LIGLHYQQDGTFAFV-ADGNGRLLH-HPDHARIG----TQVSSSPTISAALRGEAGTLEV 243 Query: 179 SLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAAL 238 + + G + V + A P G + ++ + Sbjct: 244 PNYIGVPMLAGFAPVPEAHWAVVVQTPRDLALAPLGEMTRKVLLYILPVSIIGLLLMLWM 303 Query: 239 V--AVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYS---MYN 293 + + + E+ I+ + V + + Sbjct: 304 TYRLTLPLRQLAHSASHLSATQTGEQLRRIDAWYVEVAAIRRALLTGEQLLQEKFGKLRQ 363 Query: 294 SAFLDDLTKAMGRKSFDEDLKALPE--KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVV 351 A D LT R++ L AL + + + D+D FK +NDTFGH GDEVL + Sbjct: 364 QAQSDALTGLANRRAMQLALDALMQSSRAFAVLALDIDHFKRVNDTFGHDAGDEVLKHLA 423 Query: 352 KILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS-----INLSTSI 406 ++L+ D R GG+EF ++ L + I + I + L+ SI Sbjct: 424 ELLRHNSRQD-DLPCRVGGEEFTMLLPDTGLADARRIAERIRSAVEQADSPHVGKLTVSI 482 Query: 407 GVAHSNEC-PTVERLKMLADERLYKSKKNGRAQISW 441 GVA + ADE+LYK+K NGR ++ Sbjct: 483 GVACRRPDTQQAGSVLKQADEQLYKAKHNGRNRVEV 518 >UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM24_DESAH Length = 488 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 78/386 (20%), Positives = 138/386 (35%), Gaps = 35/386 (9%) Query: 76 VGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQVVKYRHVKNTGFISF 135 + Y L V ++K+ + +Y +I + Sbjct: 110 DNTKQYYYSK---GILKTVERQEFRDQWYFRIKDLDTDY--EINLDPDMANQDTMTIFIN 164 Query: 136 DGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYN-A 194 VY + + L +++ + + F+ + + G ++ Sbjct: 165 HK---VYDYDGNYIGATGVGLAIHAVKKMVNTYQERYNRTIFFTDKEGNITLHGQNFSKP 221 Query: 195 KNAIFTVSEAMEHFAYLPTGL-YVFAYKKD---VYLRVCTLIIFFAALVAVISGASCLYL 250 IF V E EH + G F YKKD +Y+ + F L G + Sbjct: 222 VKNIFEVKEIAEHRQEIHAGSPLSFQYKKDNKNIYVNNRYIPEFGWYLFVEQCGDKAIAK 281 Query: 251 VRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFD 310 VR + +V II + + + A D LT R++FD Sbjct: 282 VRNTLVLNLVFSFGIIGLIL-------IVTNLTIASFQKRLTKMASTDKLTGVYNRRAFD 334 Query: 311 ----EDLK--ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGK 364 + LK + + LFD+D FK +NDT+GHL GD ++ V I + Sbjct: 335 IIIDQTLKEIQRKQTPLSIILFDLDHFKRVNDTYGHLAGDYIIQTTVGTAARTIR-NSDI 393 Query: 365 VYRFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPT 416 + R+GG+EF ++ G L + + ++I + I ++ S+GV T Sbjct: 394 LCRWGGEEFLILLKGCDLGDAMKTAEKIRTAVASQPARYGDDQICVTISVGVTEHTGQDT 453 Query: 417 VERLKMLADERLYKSKKNGRAQISWQ 442 E L AD+ LY +K +G+ + + Sbjct: 454 KETLLKRADKALYLAKASGKNRCETE 479 >UniRef50_Q1N3P2 Probable two-component response regulator n=1 Tax=Bermanella marisrubri RepID=Q1N3P2_9GAMM Length = 364 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 102/326 (31%), Gaps = 25/326 (7%) Query: 135 FDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNA 194 F ++ + L + + + + T Sbjct: 34 FSYTFSTLFIVTSILRLAHGILTQPFYAANPNAW------RMTMYVLAFIHSCTLALLFI 87 Query: 195 KNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRV 254 I + L + + + + +L + S L R Sbjct: 88 LVLIIPEYRDLAMAVALIVVGLLSGASASLSPKPIFTQFYIGSLAFPATLVSFLVEEFRF 147 Query: 255 INRGIV---EKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDE 311 ++ + F + + D LT R+ FD Sbjct: 148 LSPLFAATWIYFIFLGRRFYNEYQRAFHIEMRLKENQVKLERLNETDTLTGIYNRQYFDN 207 Query: 312 DLK------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKV 365 L + E + D+D FK IND FGHL GD+VL + + Sbjct: 208 ALDMQWDLASRSENSLSILFLDLDHFKKINDNFGHLAGDQVLCHAAHLFSEIARRKTDMI 267 Query: 366 YRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS--------INLSTSIGV--AHSNECP 415 R+GG+EFA+I ++ L + ++I H + I+L+ SIGV + Sbjct: 268 ARYGGEEFAIILPATEKQDALDLAEQIRHAIENTPCRSDQGLIHLTVSIGVNSVVPSPQG 327 Query: 416 TVERLKMLADERLYKSKKNGRAQISW 441 + AD+ LY++K NGR QI + Sbjct: 328 SPVTFLDQADQALYQAKNNGRNQIMF 353 >UniRef50_B8GTD8 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTD8_THISH Length = 451 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 15/200 (7%) Query: 253 RVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDED 312 R + E + + + + A +D LT R++FDE Sbjct: 249 READERRCEDYRTRAERMRARIVQLEHEAQGLRRTMDDERKQALIDQLTGVPNRQAFDER 308 Query: 313 LKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY 366 L + L ++DVD+FK IND++GH GD+V+ V + LK +I + V Sbjct: 309 LAQEYSRWKRFNTPLALIMWDVDRFKLINDSYGHKAGDKVIRAVAQKLKERIR-ETDMVA 367 Query: 367 RFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVE 418 R+GG+EF ++ TG + ++ L+I ++I HF+ + ++ S G+A E T E Sbjct: 368 RYGGEEFVMLLTGASGQDALAIAEKIRAEIAGLGFHFRGERVPITISAGIALFAEGDTPE 427 Query: 419 RLKMLADERLYKSKKNGRAQ 438 AD LY++K GR + Sbjct: 428 TAFDNADRALYEAKNTGRNR 447 >UniRef50_B5W1M1 Diguanylate cyclase with PAS/PAC and GAF sensors n=4 Tax=Arthrospira RepID=B5W1M1_SPIMA Length = 1068 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 80/191 (41%), Gaps = 18/191 (9%) Query: 270 FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYL 323 F + L L + + + A LD LT+ R+ FD L + L Sbjct: 875 FIKQLAVQLGIAIQQAELYQQLERLATLDGLTQVPNRRQFDTYLITEWRRCIREFTPISL 934 Query: 324 CLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLE 383 L DVD FK+ NDT+GH GD L +V + L I V R+GG+EFA+I E Sbjct: 935 ILCDVDFFKHYNDTYGHQEGDRCLQEVAQALTRSIRRPGDLVARYGGEEFAIILPNTDAE 994 Query: 384 ELLSILKEIVH--------FQVGSIN--LSTSIGVAH--SNECPTVERLKMLADERLYKS 431 + ++ I + I+ +S S+G N +E L +AD LY++ Sbjct: 995 GMCNVAGTIREQILQLQRIHETSPISEYISVSMGGVSVLPNSNMQLEHLISMADTALYQA 1054 Query: 432 KKNGRAQISWQ 442 K GR + Sbjct: 1055 KAQGRDRFVMH 1065 >UniRef50_Q48HP3 GGDEF domain protein n=6 Tax=Pseudomonas syringae group RepID=Q48HP3_PSE14 Length = 604 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 68/406 (16%), Positives = 129/406 (31%), Gaps = 64/406 (15%) Query: 67 LNPTEEQLLVGLRTAYADSVSPSYLY---DVGPYLISSDECIQVKEFE----------KN 113 +N + + + G ++IS I + + Sbjct: 198 VNSAQREFFQHHLQTPGKAPFIGPTIRSRASGEWVISVSRRINHPDSSFAGLMVVTIGVD 257 Query: 114 YCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDS 173 + ++ S G+ V Y + L + S Sbjct: 258 HLLKFYSDIQVGKTGIISLTSAAGQLRVRYPH------------------LEVEIGRDLS 299 Query: 174 ENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDV--YLRVCTL 231 +F+ +N T + + + Y + K+ + +L Sbjct: 300 STPIFTSERNRPSGTTQFVSRIDGVARFYAFKRSAVYPIVTVVALGQKEAMLDWLGQTKQ 359 Query: 232 IIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSM 291 I ++ + + L+ + +R E + + + AA ++ + Sbjct: 360 SILVMLVLLGLVVGLGIRLIGHIHSRIRAEDQLLDSQ-------------AALIQLNQHL 406 Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDE 345 A D LT R+ FD+ L+ ++ L L D D FK ND +GHL GDE Sbjct: 407 EFIASEDKLTGLANRRRFDQFLEVEFKRARRERSLLSLILIDADHFKRYNDHYGHLAGDE 466 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI--------VHFQV 397 L+ + ++++ I R+GG+E AV+ G + + I + Sbjct: 467 CLVALARVVEQCIRRPGDVAARYGGEEIAVVLPGTDESSARQVAENILQAIRDEQIEHPA 526 Query: 398 GSIN-LSTSIGVAHSNECP---TVERLKMLADERLYKSKKNGRAQI 439 ++ S+GVA L LAD LY +K GR ++ Sbjct: 527 SPFGIVTVSLGVATFVGTDRQLDQRSLIELADRALYAAKSQGRNRV 572 >UniRef50_Q2IXE2 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Alphaproteobacteria RepID=Q2IXE2_RHOP2 Length = 457 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 18/178 (10%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKN 333 ++ + A D LT R+ + L L E+ L + D+D FK Sbjct: 277 YTDHLRDNVQHSIEMAITDGLTGLHNRRYMESHLATLAEQAGSRGKPLALMILDIDFFKA 336 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 INDT+GH GD+VL + +K I R+GG+EF ++ L+ + + + Sbjct: 337 INDTYGHDAGDDVLREFAVRIKKSIRGI-DLACRYGGEEFVIVMPETDLQVAQMVAERLR 395 Query: 394 HFQVGS----------INLSTSIGVAHSN-ECPTVERLKMLADERLYKSKKNGRAQIS 440 G I ++ SIG++ + V L AD LY++K +GR ++ Sbjct: 396 RAIAGEPFAIEKGTKRIAVTISIGLSTLERKGEAVRDLLKRADTALYRAKHDGRNRVV 453 >UniRef50_Q1NKN5 GGDEF:Response regulator receiver n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NKN5_9DELT Length = 333 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 22/225 (9%) Query: 233 IFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMY 292 +F ++ ++L R + K A +++ +L + + Sbjct: 106 LFKPITPHILRSKVDIFLELDRQRRQLAHKSAELDSRVRDLLA----LKEQLEEANRKLN 161 Query: 293 NSAFLDDLTKAMGRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEV 346 + D LT R+SF E L+ + L L D+D FK NDT+GH+ GD+ Sbjct: 162 ELSLTDGLTGLANRRSFQEALQTEWRRAMRNRHFLTLILADIDSFKQFNDTYGHVAGDDC 221 Query: 347 LMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVG-------- 398 L+++ K++KS + V R+GG+EFA++ L+ + +EI Sbjct: 222 LVQIAKVIKSPLMRSSDLVARYGGEEFAILLPDTDLKGGEHLAEEIRREVEQLEIDHENS 281 Query: 399 --SINLSTSIGVAHSNECPTVER--LKMLADERLYKSKKNGRAQI 439 +++ S GVA + L AD+ LY +K++GR Q+ Sbjct: 282 ATGAHVTMSFGVASVVPRLDLVELDLVCAADKALYAAKEDGRNQV 326 >UniRef50_Q3A5K1 Two component signal transduction response regulator n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5K1_PELCD Length = 323 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 79/197 (40%), Gaps = 17/197 (8%) Query: 254 VINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL 313 + + E I H + A + + A D LT R FD + Sbjct: 107 PMGLPMEEHRIKIRWHLKNR-----ERIHALHQAQSQLARIALTDSLTGLYNRAYFDATI 161 Query: 314 KALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 + L + D+D FK INDT+GHL GD+ L V +LK Q V R Sbjct: 162 TQEVARCSRRGLPLSLLMVDLDHFKKINDTYGHLAGDQALAAVALVLKEQSR-ISDTVCR 220 Query: 368 FGGDEFAVIYTGGTLEELLSILKEIVHFQVG---SINLSTSIGV--AHSNECPTVERLKM 422 FGG+EFAVI T ++ + I + ++ SIGV A + L Sbjct: 221 FGGEEFAVILPETTNANAATVAERIRKKISQLDLAFPVTASIGVGSAKVTNQLLPDHLIA 280 Query: 423 LADERLYKSKKNGRAQI 439 AD LY++K GR ++ Sbjct: 281 EADGALYEAKSQGRNRV 297 >UniRef50_Q0AG42 Diguanylate cyclase n=2 Tax=Nitrosomonas RepID=Q0AG42_NITEC Length = 551 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 67/362 (18%), Positives = 129/362 (35%), Gaps = 51/362 (14%) Query: 115 CADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSE 174 + +K + GK + V H +L ++ L+ S Sbjct: 199 FESRLAEIKKFSSGEIVLLDQHGKVLLGSAPGVDHQA----VLSPHQWELIQMFDEPISY 254 Query: 175 NLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIF 234 + + + G + ++N T+ +H + ++ +L +++I Sbjct: 255 DGL-----SYPKAIGLAHTSENIPVTILVEQDH----SAIQAAWIKLRNRFLEFVSILII 305 Query: 235 FAALVAVISGASCLYLVRRVINRGIVEKEAIINNHF-ERVLDGGLFFSAADVKKLYSMY- 292 VA+ G S + ++++IN E ++ + + D + + ++ Sbjct: 306 IVTAVALYMGHSIVTPLKQLINAVKGIVEGNLDIYLPAKRRDEVGQLTDIFNQMTRALRN 365 Query: 293 --------------------NSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLF 326 + D LT R D L ++ L + Sbjct: 366 KHIEIMTANQAMQQQNQLLQKLSITDGLTGLYNRTKLDTILSEQLARFKRHDRPFCLLMI 425 Query: 327 DVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELL 386 D+D FK IND GH++GD +L+ V +L I R+GGDEF VI T + Sbjct: 426 DIDYFKTINDKLGHIVGDRILVTVASVLLKSIRTI-DYAARYGGDEFVVILTETNSSAAI 484 Query: 387 SILKEIV--------HFQVGSINLSTSIGVA-HSNECPTVERLKMLADERLYKSKKNGRA 437 + I F+ +++ SIG+ + T L AD LY++K++GR Sbjct: 485 KTAERIRAEVNSACLAFKEHPAHITLSIGITQSYYDDITPNDLIARADAALYEAKESGRD 544 Query: 438 QI 439 ++ Sbjct: 545 RV 546 >UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clostridium thermocellum RepID=A3DEY5_CLOTH Length = 550 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 16/201 (7%) Query: 254 VINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL 313 +I N ++ + + +V+ M+ A +D LT R F E L Sbjct: 347 LIEHKYFNAFDDNNLRLLNIIGQQVGIAMENVELYQRMHEMATIDSLTGIYNRLYFQERL 406 Query: 314 KALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYR 367 + L + D+D FK NDTFGHL GD+VL + ++K + + R Sbjct: 407 REEFANAKKENYDLSLAIMDIDHFKRFNDTFGHLFGDKVLKHIAHLMKKSLRS-GDIIAR 465 Query: 368 FGGDEFAVIYTGGTLEELLSILKEIVHFQVG--------SINLSTSIGVAHSNECPTVE- 418 +GG+EF ++ +++E ++ + + +++ S GV+ E E Sbjct: 466 YGGEEFVILLPRTSVKEAYDKVERLRNIVAKTTIKDELVEASVTVSFGVSSYPEFANTES 525 Query: 419 RLKMLADERLYKSKKNGRAQI 439 L AD LY +K++GR + Sbjct: 526 ELLKTADNALYDAKESGRNCV 546 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 224 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 98/226 (43%), Gaps = 19/226 (8%) Query: 232 IIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSM 291 + + + +I+ L L+ +G E I + + L + A++K + Sbjct: 539 LPLASLCIPLIAQGETLGLLFLCTFKG--EILPDIRQQLAKTVAEQLALAIANLKLREQL 596 Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDE 345 + D LTK R+ ++ L + + + DVD FK ND+ GH GD Sbjct: 597 EEQSLRDPLTKLFNRRYLEQRLSQELARAKRHHYSVGVLMIDVDHFKRFNDSLGHDAGDR 656 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL--------LSILKEIVHFQV 397 +L + +LK+ I R+GG+E +I TLEE +I + + + Sbjct: 657 ILASIGTLLKNNIRT-SDVACRYGGEEITIILPDATLEEASQKAEFLRQAIAEMKIEYSG 715 Query: 398 GSIN-LSTSIGVA-HSNECPTVERLKMLADERLYKSKKNGRAQISW 441 +N ++ S GVA + + T + + +AD+ LY +K+ GR ++ Sbjct: 716 KIVNSVTASFGVACYPDHGETGQEIIQIADKALYDAKQAGRNRVIV 761 >UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KB78_CYAP7 Length = 547 Score = 224 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 19/182 (10%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKN 333 ++ + +LD+LT R+ FD L+ + L L D+D FKN Sbjct: 347 RLIKLTQENKRLRKLVYLDELTGIYNRRYFDHYLEREWRRMTREKAPLSLMLLDIDYFKN 406 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 NDT+GH LGD L KV + ++ + V R+GG+EFA+I + + L + + I Sbjct: 407 YNDTYGHQLGDACLKKVAQAIQKSLKRSTDIVARYGGEEFAIIISQCDNKGALFLAEIIR 466 Query: 394 H--------FQVGSIN---LSTSIGVAHSNEC--PTVERLKMLADERLYKSKKNGRAQIS 440 + +N ++ SIGVA + L +ADE LY+SK GR +++ Sbjct: 467 EQIKSLAINHKNSQVNLKIVTASIGVATIIPALETQPKMLIQMADEALYQSKHEGRNRVT 526 Query: 441 WQ 442 ++ Sbjct: 527 FR 528 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 224 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 19/225 (8%) Query: 233 IFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMY 292 I + +I+ L L N +A + R + + + A++ ++ Sbjct: 1390 IATTLCIPMIAQGETLGLFYLSTNNSTALPDAKLQ--IARTVAEQVALAIANLNLRETLQ 1447 Query: 293 NSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEV 346 + D LT R+ +E L + + + DVD FK NDT+GH +GD V Sbjct: 1448 YQSIRDPLTGLYNRRYLEEVLTQEIARGQRRQHPISVVMIDVDYFKRFNDTYGHDVGDYV 1507 Query: 347 LMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVG-------- 398 L + +LK + R+GG+E +I +LEE +EI Sbjct: 1508 LQTIGAMLKETVR-GSDIACRYGGEEMTLILPESSLEETTIKAEEIREAIAQLTLAYNGQ 1566 Query: 399 -SINLSTSIGVA-HSNECPTVERLKMLADERLYKSKKNGRAQISW 441 L+ S+G+A T L AD LY++K GR Q+ Sbjct: 1567 HLGKLTISLGIAGFPKHGTTGIALIQAADAALYRAKAAGRNQVVV 1611 >UniRef50_B1HU26 Response regulator receiver domain protein (CheY-like) n=2 Tax=Bacillaceae RepID=B1HU26_LYSSC Length = 589 Score = 224 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 120/320 (37%), Gaps = 22/320 (6%) Query: 133 ISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEY 192 GK ++ SL+ L +L++ + + L+ +G V Sbjct: 264 FHKIGKLLLW-----ITISSLMASFILPDVALINNFTTTFAVVVFIFLWLSGIFVFRKGQ 318 Query: 193 NAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVR 252 + + + + F + R+ + A+ I + L Sbjct: 319 KMAR--YYIIGWTVLLSSIIVQALAFLSIIPFHPRIFEEVPAIGAIFESIFLSLALGDKI 376 Query: 253 RVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDED 312 +I + + +N E + + + A D LT+ R D+ Sbjct: 377 NIIKKEHQIMQETLNETLEYKVQERTKELESAKL---ELEALANTDRLTQIPNRVRLDDV 433 Query: 313 LKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY 366 L+ E+ + L D+D FK +ND FGH +GD VL +LK+ + V+ V Sbjct: 434 LEKEFEQATGSGTPLSIILLDIDHFKAVNDEFGHQVGDLVLRHAADLLKNYVRVE-DTVG 492 Query: 367 RFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS-----INLSTSIGVAHSNECPTVERLK 421 R+GG+EF V+ L++ + + + + + ++S GV T+ L Sbjct: 493 RWGGEEFLVVCPRTPLKDAVHLSENLRQQLEQHSFPVVHHKTSSFGVTSFVMGDTIHSLL 552 Query: 422 MLADERLYKSKKNGRAQISW 441 D+ LYK+K++GR ++ + Sbjct: 553 SRCDKALYKAKEHGRNRVEY 572 >UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X290_DESRD Length = 769 Score = 224 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 16/176 (9%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL------PEKGGYLCLFDVDKFKN 333 A + + A D LT R+ F E + L L+D+D FK Sbjct: 588 EVTAQKQAESKLRELATRDSLTGVWNRRYFFELAARELESAQRYKHPLSLILYDIDHFKR 647 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI- 392 INDT+GH++GDEVL ++ +++ + + + + R GG+EFAV+ LE+ ++ + I Sbjct: 648 INDTYGHMIGDEVLRQLTQLVGANLR-NVDLLARVGGEEFAVLLPHTYLEQAHTVARRIL 706 Query: 393 -------VHFQVGSINLSTSIGVAHSNECPT-VERLKMLADERLYKSKKNGRAQIS 440 + + G + L+ SIG++ S +E L AD+ LY +K GR I Sbjct: 707 RGVNEAVIRTEAGPLQLTISIGMSSSAHADNCLESLIHDADQALYAAKNKGRNSIC 762 >UniRef50_Q47I66 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47I66_DECAR Length = 322 Score = 224 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 22/226 (9%) Query: 239 VAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKL-----YSMYN 293 + ++S + ++ + I G + + + A ++ + Sbjct: 96 IVLLSSVNDEDILAKGILAGADDFLYKPVSEVVLLAKVRAMLRIATRQQEICAVHRQLKE 155 Query: 294 SAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVL 347 A LD LT R+ FD+ L A ++ + + DVD FK ND +GH GD L Sbjct: 156 IAILDSLTGIPNRRHFDDTLAAEWKRCIRTETPLSIVISDVDFFKQFNDIYGHQAGDVCL 215 Query: 348 MKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV---------HFQVG 398 V L + + V R+GG+EF I G ++ + + H + Sbjct: 216 KAVASSLSESLFRVEDTVARYGGEEFVAILPGTDANGAYAVAERMRQSARDLCIPHERGI 275 Query: 399 SINLSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQISWQ 442 +S S GVA + ++L AD LY +K+ GR +++++ Sbjct: 276 DGRISCSFGVASTCPSADKAPQQLLRTADAGLYAAKRAGRNRVAFK 321 >UniRef50_A1SY47 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY47_PSYIN Length = 794 Score = 224 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 17/245 (6%) Query: 211 LPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYL--VRRVINRGIVEKEAIINN 268 + YK++ ++ ++F L+ L + + +N+ I +K A + Sbjct: 548 IINNSSAIKYKEEFNYKLLWRVLFVVLLLIAFFSYRQWLLTKLNKTLNKKINQKTAALQE 607 Query: 269 HFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDE------DLKALPEKGGY 322 E + + + + AF D+LT R E + + Sbjct: 608 LNESLERRIKERTQKIEHSKMLLQDVAFKDNLTSIFNRHYLFEISPMLLTVSEETQTPLS 667 Query: 323 LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL 382 L L DVD FK INDT+GHL GD +L +VK +++ + D RFGG+EF ++ L Sbjct: 668 LLLIDVDHFKKINDTYGHLTGDNILKFIVKNIQAILRAD-DIFVRFGGEEFIILLPKANL 726 Query: 383 EELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKN 434 EE + + +++ H I+++ SIG + T+E+L AD LY +K+ Sbjct: 727 EESVMVAEKLRLSVEQNNYHKNGMDISITVSIGASQYQHTETLEKLISRADLALYSAKEK 786 Query: 435 GRAQI 439 GR Q+ Sbjct: 787 GRNQV 791 >UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q4KDW8_PSEF5 Length = 315 Score = 224 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 13/179 (7%) Query: 274 LDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGY---LCLFDVDK 330 L S A K + + + D LT+ R +++ L+ + G L + D+D Sbjct: 134 LTDVAINSLALQKANQQLQHLSRTDHLTQLYNRGHWEQRLQFEYSRHGSSIALLMLDIDH 193 Query: 331 FKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILK 390 FK+IND GH GD V+ +V +++ + D R+GG+EFA++ L ++ + Sbjct: 194 FKSINDRHGHQAGDAVIKRVSELIHQHVR-DSDVAGRYGGEEFAILLPHTDLAGARTLAE 252 Query: 391 EIVH--------FQVGSINLSTSIGVAHSN-ECPTVERLKMLADERLYKSKKNGRAQIS 440 + +I + S+G+A + L AD+ LY SK+ GR ++S Sbjct: 253 RLRQSVEEQEVIHNGQAIAFTISLGIACLDRPARDHRCLIEWADQALYASKRAGRNRVS 311 >UniRef50_A6LYL1 Diguanylate cyclase n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYL1_CLOB8 Length = 568 Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 105/290 (36%), Gaps = 19/290 (6%) Query: 162 FSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYK 221 +L+ + L+ SL+ + G Y + ++ + + + Y Sbjct: 276 MPILNNFFKLSILFLVLSLYISKIIPDGFTY---DILYLQMILVGLYILISIYSYFKFGM 332 Query: 222 KDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFS 281 +Y V I+F ++ ++ L + G + Sbjct: 333 GSIYYLVGIFILFTGFIIYILGSYGLLEWNIFAFSTCYPAASIETLLF----TIGIIKQI 388 Query: 282 AADVKKLYSMYNSAFLDDLTKAMGRKSFDED-----LKALPEKGG-YLCLFDVDKFKNIN 335 + + + D LT R+ F+E L+ EK + + D+D FK +N Sbjct: 389 KHEKEVNTKLQLEVITDKLTNIYNRRYFEETVVNKILQLEKEKSLVSMLVLDIDHFKKVN 448 Query: 336 DTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF 395 DT+GH GD VL + I+K + + + R+GG+EF + +E I + I Sbjct: 449 DTYGHSTGDLVLSETAMIIKQCLRKE-DILVRWGGEEFVAVLPFTDSKESTIIAETIRLS 507 Query: 396 QVGSI-----NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 ++ SIG+A + AD LY +K+NGR + Sbjct: 508 IENHKFKFVNKITVSIGIAEKDVVEDFHSWFRRADNALYNAKENGRNTVC 557 >UniRef50_B8G8L1 Diguanylate cyclase n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G8L1_CHLAD Length = 369 Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 58/316 (18%), Positives = 116/316 (36%), Gaps = 22/316 (6%) Query: 147 VTHNRSLIFLLGLERFSLL--SKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEA 204 VT++ LI + + ++ +SL + G Sbjct: 53 VTNDVLLIIISLSVCWMMITRRESLVTIERFMFIVFAAEALLFNGIVPPLLGQTLPQLWE 112 Query: 205 MEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEA 264 + L + ++ ++I+ + ++ LV + + Sbjct: 113 QTVNDDIWFLLMICTLAFHLFRHRISVILVSSLYGLALAIVGGQVLVAGLQGNDVTMGLR 172 Query: 265 IINNH--------FERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK-- 314 + + F ++ S + M AF+D LT R+ ++ L+ Sbjct: 173 ALQVYGMGGIFLCFIYIISRYRSISQRLQIEYQLMQEWAFIDMLTGLFNRRRCEQLLQTN 232 Query: 315 ----ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGG 370 + +CL+D+D FK +NDT+GH +GD+VL ++ ++ +S V R+GG Sbjct: 233 IEYSRRYHQPLTICLWDIDHFKQVNDTYGHEVGDQVLRQIARLAQSSTRS-TDLVGRWGG 291 Query: 371 DEFAVIYTGGTLEELLSILKEIVHFQVGSIN-----LSTSIGVAHSNECPTVERLKMLAD 425 +EF +I L E ++ + H + ++ S G+ + + L AD Sbjct: 292 EEFCLILPHTCLSEAEELVDRLRHLIKTQVRVGQQPVTASFGLVEYDTTDNLASLIRRAD 351 Query: 426 ERLYKSKKNGRAQISW 441 E LY +K GR ++ Sbjct: 352 EALYAAKAAGRNRVVV 367 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 20/225 (8%) Query: 235 FAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKL----YS 290 +++ +S + + R + + A +L F + V L Sbjct: 197 IGSVMGALSVTIPVVTLIRETDTDKLMIVAATIGTIGLLLGITYFLTWRLVLNLDMAQKH 256 Query: 291 MYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGD 344 + A D+LT R+ + L ++ L + D+D FK INDT+GH GD Sbjct: 257 LKRLASTDELTGLKNRRQIMKRLDEEYQRAIRLGEPLCLIMLDLDHFKKINDTYGHPFGD 316 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQ 396 VL V +K + + R GG+EF ++ G T EE + + + + ++ Sbjct: 317 LVLKCVAGHMKKALRR-YDVLGRIGGEEFLIVSPGTTREEAVVLAQRLRSTVEMEKIAYE 375 Query: 397 VGSINLSTSIGVAH-SNECPTVERLKMLADERLYKSKKNGRAQIS 440 + ++ S GVA VE L AD LY +K+ GR ++ Sbjct: 376 DKKVTITVSCGVAFLYKGDDNVEILLKRADSALYIAKQEGRNRVV 420 >UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Idiomarina baltica OS145 RepID=A3WMD3_9GAMM Length = 689 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 70/173 (40%), Gaps = 12/173 (6%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKN 333 + + + + D LT+ R ++ L+ ++ + L D+D FK Sbjct: 514 LNQELTEANQRLEHLVHTDALTQVWNRYHMEQTLEEEVKRCKRHGRDLAVILLDIDHFKR 573 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 +ND +GH +GD+VL + + + + R+GG+EF +I LE + + + Sbjct: 574 VNDDYGHDVGDKVLKLISEAIHQWLRS-SDVFGRWGGEEFLIIAPETDLESANQLAERLR 632 Query: 394 HFQ-----VGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 ++ S GVA L AD LY+ K++GR + Sbjct: 633 RRLSNLQFDKVGQVTASFGVAELLPSEDRNSLVKRADNALYQVKESGRNSVEV 685 >UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammaproteobacteria RepID=B8KJJ5_9GAMM Length = 540 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 113/272 (41%), Gaps = 26/272 (9%) Query: 191 EYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAA--------LVAVI 242 + TV + +P L+ + + + AA Sbjct: 259 NFYVWEFSVTV---LILLLSVPVFLWTLSSVTSPLKNLAAIFRRLAAGSEESVVDAAVTK 315 Query: 243 SGASCLYLVRRVINRGIVEKEAIINNH--FERVLDGGLFFSAADVK-KLYSMYNSAFLDD 299 L+ R + + ++ ++ R L+ + +++ K + + A +D Sbjct: 316 DEIGDLFNAAEAFRRENIRERELLADYRELSRTLEAKVTQRTRELEAKNEELDHLASVDK 375 Query: 300 LTKAMGRKSFDEDL------KALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKI 353 LT R++ D+ L ++ + L D+D FK +ND +GHL GD+VL+ + + Sbjct: 376 LTDTFNRRALDKALLAELERADRYQRPLSILLMDIDLFKQVNDEYGHLTGDKVLVTLSQT 435 Query: 354 LKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS-----INLSTSIGV 408 ++ + + R+GG+EF VI LE+ ++ +++ G+ ++ SIG+ Sbjct: 436 IRENLRA-SDILGRWGGEEFLVICPETDLEQARNVAEKVRQAIEGTDFELGKTITISIGL 494 Query: 409 AHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + E + E L AD+ LY++K GR ++ Sbjct: 495 SVLIEGTSAESLVAEADKALYQAKSQGRNRVC 526 >UniRef50_D1B3P8 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B3P8_SULD5 Length = 405 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 83/337 (24%), Positives = 140/337 (41%), Gaps = 42/337 (12%) Query: 129 NTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKP-- 186 NT F GK F +++ P++ + L L+ L S +F L ++G Sbjct: 80 NTFFTHLSGKAF-WHIAPLSCAIGYLLLYALQERGLFS----------LFGLLRSGIALG 128 Query: 187 VTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGAS 246 + G Y N + + LPT L+ D + + + F LV+++ A Sbjct: 129 ILGISYYGLNHFSSNLHTALNTPLLPTFLHKITQASDFIFILSIIALLFIFLVSLLFEAQ 188 Query: 247 CLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGR 306 ++ + ++ +L L A ++ Y A++D LT R Sbjct: 189 TQKAPFWMLTSLMF-SFLVMQEAQSFILFSLLSALIAMSALVHDAYKMAYIDTLTGIPSR 247 Query: 307 KSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY 366 ++ +E L + + + D+D FK NDTFGH +GD+VL V K L + GK + Sbjct: 248 RALEERFLRLGSR-YVIAMVDIDFFKKFNDTFGHDIGDDVLKLVAKELNHV--KNGGKAF 304 Query: 367 RFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI-------------------------N 401 R+GG+EF ++++G EE + L+E+ Sbjct: 305 RYGGEEFTILFSGKKKEECIMALEEVREAIFRRGFVIRDKNRPAKSSKATKTNPSPKKER 364 Query: 402 LSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 LS SIGVA S + T + + AD+ LYK+K++GR Sbjct: 365 LSVSIGVALSQKGKTPQEIIKKADDALYKAKESGRNC 401 >UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB67_9DELT Length = 752 Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 110/275 (40%), Gaps = 17/275 (6%) Query: 181 FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA 240 + + + + + VS A+++ ++P ++ + + LV Sbjct: 474 LWAEHAASLADKSFTDGVCLVSMAVKNRHHMPATGEYPDSSVAIFDKQTRFDQARSVLVL 533 Query: 241 VISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL 300 + + +I+ V+ RV+ + S + + SM A D L Sbjct: 534 PLVRGEQVLGAITLISSR-VKAYPPAAREMLRVISHQVGVSMQNARMYQSMEERATTDGL 592 Query: 301 TKAMGRKSFDEDLKALPE------KGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKIL 354 T ++F E L+ L + + L D+D FK++NDT+GH +GD VL +V I Sbjct: 593 TGLTNHRAFQERLEQLHALSERTGQKFSIILTDIDHFKSVNDTYGHPVGDAVLKRVAAIF 652 Query: 355 KSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSINLSTSI 406 + V R+GG+EF ++ E + GS +++ S+ Sbjct: 653 TRRAR-KVDIVARYGGEEFVLVLPDTDAEGAAVFANRLREEIAAQTITSDNGSFSVTLSL 711 Query: 407 GVAHSNECPTV-ERLKMLADERLYKSKKNGRAQIS 440 GVA T L LAD+ LY K++GR +++ Sbjct: 712 GVAEFPRDSTKRHELIELADQALYYCKEHGRNRVT 746 >UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGI8_CYAP7 Length = 1079 Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 17/203 (8%) Query: 255 INRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLK 314 ++ +K + + R + + + +++ S+ + D LT R+ +E LK Sbjct: 871 LSASEPDKLSEVKQQLARAVSEHISLALVNLQLRESLKAQSIKDSLTDLYNRRYMEESLK 930 Query: 315 ALP------EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRF 368 + L + DVD FK NDTFGH GD VL +V L + R+ Sbjct: 931 REISLAQRKQHSVGLIMIDVDHFKEFNDTFGHKAGDLVLQEVSNFLMINVRS-GDIACRY 989 Query: 369 GGDEFAVIYTGGTLEELLSILKEIV---------HFQVGSINLSTSIGVAH-SNECPTVE 418 GG+EF +I +L + ++I + +++ S+GVA + + Sbjct: 990 GGEEFLLILPEASLTDSQQRAEQIRQGIKQLDFKRYDQSFRSVTVSVGVASFPDHGTNND 1049 Query: 419 RLKMLADERLYKSKKNGRAQISW 441 +L AD LY++KK GR ++ Sbjct: 1050 QLIQAADTALYQAKKQGRDRVVV 1072 >UniRef50_C6BU46 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BU46_DESAD Length = 490 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 99/259 (38%), Gaps = 23/259 (8%) Query: 199 FTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRG 258 ME +Y + + +Y I+ + + L R I Sbjct: 229 VVALSGMEVSSYNMSETVPVGSNQMIYSPGAGRILALPLVARGEKFGCLVMLCERNIRLA 288 Query: 259 IVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPE 318 + ++ L + ++ + A D LT+ R+SFDE L + Sbjct: 289 KDQVSSL------NAAVNHLSLALSNAIMFNKIKTRANRDGLTRVYNRRSFDERLVEEFK 342 Query: 319 KG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDE 372 + L + D+D FK +NDT+GH+ GD VL KV ++ + + R+GG+E Sbjct: 343 RHQRLNTELSLLMVDLDYFKAVNDTYGHMAGDMVLEKVARMFEKTFRS-TDFIARYGGEE 401 Query: 373 FAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNEC--PTVERLKM 422 F ++ ++ + + I +Q S N++ SIGV+ + Sbjct: 402 FVILLPHTREDQAEMLAERIRAKIESCAMTYQDKSFNITASIGVSSVRPGSLEKDTEIVR 461 Query: 423 LADERLYKSKKNGRAQISW 441 ADE LY +K GR ++ Sbjct: 462 KADEALYDAKMQGRNRVVV 480 >UniRef50_Q1MYJ5 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Bermanella marisrubri RepID=Q1MYJ5_9GAMM Length = 642 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 72/401 (17%), Positives = 140/401 (34%), Gaps = 52/401 (12%) Query: 89 SYLYDVGPYLISSDECIQVKE-----FEKNYCADIMQVVKYRHVKNTGFI------SFDG 137 LY Y ++ + + D + KY + + Sbjct: 243 GMLYVWKEYTWLNEYITTISLILLLASISFFIRDFFDIKKYSPNLSRLVLCSFYWYLLLS 302 Query: 138 KTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNA 197 F++ Y ++ F ++ + + + L + A Sbjct: 303 IVFIFIPYSISIRIGAFFA-----WTQILLIIYITLYMLNRGHPSSRYFAVAWAVFLIGA 357 Query: 198 IFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIF----------FAALVAVISGASC 247 + Y + + +L + +A + A Sbjct: 358 LLLALNKFAFLPITLASEYGLQIGAGLEIMFLSLALADRMANTQREKISAQARSLDLAHQ 417 Query: 248 LYLVRRVINRGIVEKEAIINNH---FERVLDGGLFFSAADVKKL----YSMYNSAFLDDL 300 + R + R +E I H E+ +D + +++L + N + D L Sbjct: 418 VTQEREKLYRAEMENLKIAREHNEVLEKTVDDRTKELSEALEELSNAHEKLKNISVTDAL 477 Query: 301 TKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKIL 354 TK R FD+ ++ ++ L + D+D FK +ND FGH GD L KV + + Sbjct: 478 TKIHNRYFFDQHWRSEFKRAHRHKMSIALIILDIDHFKKVNDNFGHPAGDLCLQKVAQSI 537 Query: 355 KSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSINLSTSI 406 + Q + V R GG+EFAVI G + ++I H ++ +I ++ SI Sbjct: 538 RIQANRESDLVCRLGGEEFAVILPGTDEMGAYEVAEKIRHTIEKRHISWEGKTIKITVSI 597 Query: 407 GVAHSNECPTVER----LKMLADERLYKSKKNGRAQ-ISWQ 442 G++ + E+ + AD+ LY++K NGR + + ++ Sbjct: 598 GISAMTPRKSDEKMRNIMFNQADQALYQAKGNGRNRTVIFE 638 >UniRef50_A6VEW2 Ggdef domain protein n=8 Tax=Pseudomonas RepID=A6VEW2_PSEA7 Length = 668 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%) Query: 256 NRGIVEKEAIINNHFERVLD---GGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDED 312 R E E ++ + +++ + A L A D LT R + E Sbjct: 466 QREQAEHEQEVSGRLQALMERVNSMEQDAKAFHTHLEDQRQKALTDPLTGLPNRAALSER 525 Query: 313 LKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY 366 L+ + L + D+D FK IND FGHL GD+VL + L+ ++ + Sbjct: 526 LEQEVARRRRDGGELLLAVLDIDHFKRINDDFGHLAGDKVLKIIAGELRKRLR-QADFIA 584 Query: 367 RFGGDEFAVIYTGGTLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVE 418 RFGG+EF V+ L+ +L+ + HF+ ++++ S G+ E Sbjct: 585 RFGGEEFVVLLPATPLDAGRQLLERLRAAIAACPFHFKGEPLSITCSAGITAFVGNEAGE 644 Query: 419 RLKMLADERLYKSKKNGRAQISW 441 AD+ LY++K+ GR ++ Sbjct: 645 AAFERADQALYRAKRAGRDRLEV 667 >UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4Y784_SHEPC Length = 368 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 21/226 (9%) Query: 234 FFAALVAVISGASCLYLVRRVINRGIVEKEAII--NNHFERVLDGGLFFSAADVKKLYSM 291 A + S + + ++++ + E ++++ N + E+ L+ ++ ++ Sbjct: 142 TLAEFGIKLQSNSDINTLNQLVDGVMDEMQSLLINNQNMEQSLNAMGQEVQHLKSEMENL 201 Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDE 345 +A D LT R++++ ++ + L + D+D+FK NDT+GH +GD+ Sbjct: 202 SLAAMTDQLTSLYNRRAYEIAIQDHIHRAQEQHSRCSLLIVDIDRFKQFNDTYGHQIGDK 261 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI----- 400 VL V LK + D V R+GG+EF V+ + L + + + Sbjct: 262 VLAYVALALKQCVRGD-DFVARYGGEEFVVLLPNTHFHDALQVAETLRERISERHLTIGK 320 Query: 401 -------NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 ++ SIG+A E E L AD+ LY++K +GR + Sbjct: 321 DKKLSLGAITVSIGLASLQEGDDAETLFSRADKALYEAKSDGRNCV 366 >UniRef50_Q21VE2 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21VE2_RHOFD Length = 398 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 64/320 (20%), Positives = 124/320 (38%), Gaps = 21/320 (6%) Query: 136 DGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAK 195 G+ + V I + + ++ + + A+ ++ + + A Sbjct: 76 SGRVVLARFGMVIFGLVFITAVTADIGTIRTPTAAILLFWVLMTGLIFDRRGIVIGTIAA 135 Query: 196 NAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVI 255 + E+ +L Y + ++ L F + L I+ + L + Sbjct: 136 SMAVLGLIVAENAGWLRPPFYDVGVTQ--WVTFTALFGFTSGLTYYINQGTKSALA---L 190 Query: 256 NRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA 315 R +E+ + + + ++ A D LT R+ + L Sbjct: 191 ARKEIEQRKQAEQSLKAANEELHLRVFEVQRLQVELHEQAIHDPLTGLYNRRYLSDALAR 250 Query: 316 LP------EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFG 369 + D+D FK +ND++GHL GDEVL++V +LK R+G Sbjct: 251 EIIQAKRANSSLTFVMADIDHFKFVNDSYGHLAGDEVLVQVASLLKKHAR-GSDIACRYG 309 Query: 370 GDEFAVIYTGGTLEELLSILKEI--------VHFQVGSINLSTSIGV-AHSNECPTVERL 420 G+EF +++ G +LE +EI + + +I + S GV A+ + E++ Sbjct: 310 GEEFLLVFPGTSLELAHKRAEEIQQNCAALSIQHEGKNIAVMLSFGVAAYPDHGQQWEQI 369 Query: 421 KMLADERLYKSKKNGRAQIS 440 + AD+ LY+SK NGR Q++ Sbjct: 370 IVKADKALYQSKCNGRNQVT 389 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 19/186 (10%) Query: 274 LDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGG------YLCLFD 327 + + + + A D LT+ + R++ E + A E+ L + D Sbjct: 307 VIQRAQMVESTMADNARLEQLAQTDPLTQLLNRRALTERITAEMERALRYDSTLALLMID 366 Query: 328 VDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLS 387 +D FK +NDT+GHL+GD+VL V ++L I R+GG+EF V+ ++ Sbjct: 367 LDHFKKVNDTYGHLVGDDVLRDVGQLLGHTIR-GSDITARYGGEEFLVLLPETDDAGAVA 425 Query: 388 ILKEI----------VHFQVGSINLSTSIGVAHSNEC--PTVERLKMLADERLYKSKKNG 435 + I + L+ SIGVA VE L AD LY++K G Sbjct: 426 FAERIRVAMEEHPFARDSMAEPLKLTASIGVAVFPAARIENVEDLFARADAALYRAKAEG 485 Query: 436 RAQISW 441 R ++ Sbjct: 486 RNRVRM 491 >UniRef50_UPI0001C385F5 signal transduction histidine kinase n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C385F5 Length = 1042 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 84/228 (36%), Gaps = 22/228 (9%) Query: 233 IFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKL---Y 289 + F + L + E + L + + Sbjct: 804 LIFPIWLEDDELWGLLIAYFSSEDSNYKPAEIEMLKQLTEQLAIAIQQGELYHQLQIAHQ 863 Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKALP------EKGGYLCLFDVDKFKNINDTFGHLLG 343 + LD LT R+ FD L+ ++ + + D+D FK NDT+GH+ G Sbjct: 864 ELEKVYNLDALTGIPNRRHFDHVLQHEWLQLQREQQPLSIIMCDIDYFKCYNDTYGHIAG 923 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHF-------- 395 D+ L KV LK + + V R+GG+EF ++ E + I ++I Sbjct: 924 DKCLEKVADALKKCLKRPRDLVARYGGEEFVILLPNTPTEGAIEISQQIQEAVFELNMEP 983 Query: 396 ---QVGSINLSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQ 438 ++ S+G+A + +L AD LY++K NGR Q Sbjct: 984 GAIPANFQRVTMSMGIASQIPTPQQSPTQLIFTADCALYQAKNNGRNQ 1031 >UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1B3_ACIDE Length = 445 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 104/276 (37%), Gaps = 18/276 (6%) Query: 181 FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLY--VFAYKKDVYLRVCTLIIFFAAL 238 F P G + + V + G + Y V + + + L Sbjct: 158 FTVVHPHMGIRFALAGLVAGVYFLLTAHTLARGGFHNVPVRYLFAVVSGLHGVFLLVRPL 217 Query: 239 VAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLD 298 + + + + ++ + ++ VL + + + A +D Sbjct: 218 LFRLVAPGTVEDADAGMVA-LLSQFVVLEATLSLVLMAFGALMLTNEHITRELRHLAEVD 276 Query: 299 DLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 LT R++F L+ + G + + D+D FK INDT+GH GDEVL V Sbjct: 277 PLTNVFNRRAFLTLLEKAISNAQRTQSGLPVLVIDLDHFKKINDTWGHQSGDEVLRHFVA 336 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQV--------GSINLST 404 + + + + R GG+EFA+ + E ++ + + G I L+ Sbjct: 337 LANGCLRKE-DVMGRLGGEEFAIFLPNASSEGSQAVAERLRALVAHHPAMTGRGPIALTV 395 Query: 405 SIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 SIGV T + + ADE +Y++K+ GR ++ Sbjct: 396 SIGVTQYGGGETSDFVLQRADEAMYRAKERGRNRVE 431 >UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Arthrospira RepID=B5W0E3_SPIMA Length = 1380 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 19/225 (8%) Query: 232 IIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSM 291 + V +++ L L + E + + + A++ ++ Sbjct: 1156 TLSCTLCVPMMAQGETLGLFYLSTDSATALSEG--KQQLAHTVAEQIGMAIANLNLRATL 1213 Query: 292 YNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDE 345 + + D LT R+ +E L + + + D+D FK+ NDTFGH GD Sbjct: 1214 EHQSIRDPLTGLFNRRYLEEYLSQEIARAQRQKHPIGVIMMDIDNFKHFNDTFGHDAGDY 1273 Query: 346 VLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI----- 400 VL KV ++LK ++ + R+GG+E +I G +LE ++I + Sbjct: 1274 VLQKVGELLKQKVR-EYDVACRYGGEEMTLILPGSSLENTSMRAEQIREAIASLVVASGG 1332 Query: 401 ----NLSTSIGVAHSNECPTVE-RLKMLADERLYKSKKNGRAQIS 440 +++ S GVA + ++ L AD LY++K +GR ++ Sbjct: 1333 QHLGSITASFGVAAFPKHGSIGIDLIQAADAALYRAKADGRNRVV 1377 >UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRA7_DESBD Length = 495 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 16/174 (9%) Query: 282 AADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNIN 335 ++ + +A D LT A+ R++F E + + D+D FKN+N Sbjct: 315 IRLNRQSRELALAASTDMLTGALNRRAFMESASREFARVCRYGGHLSCIMIDLDHFKNVN 374 Query: 336 DTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV-- 393 DT+GH GD VL + S++ R+GG+EF ++ G ++ +E+ Sbjct: 375 DTYGHAAGDLVLSSSAHYIASRLREP-DMFCRYGGEEFVILLPGTDRNGAATVAEELRAG 433 Query: 394 ------HFQVGSINLSTSIGVAHSN-ECPTVERLKMLADERLYKSKKNGRAQIS 440 + L+ S GVA + +C T++ L LAD+ LY++K+NGR ++ Sbjct: 434 LAGLDLQRGDEKLPLTASFGVAEIHAQCATLDTLLSLADQALYEAKENGRNRVC 487 >UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Y1_DECAR Length = 413 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 54/226 (23%), Positives = 86/226 (38%), Gaps = 19/226 (8%) Query: 230 TLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLY 289 + + + + + + V E+I VL A+ + Sbjct: 160 GAFLLIRPWLFSLGKSGLFDAAQAIAVSQFVMVESIAAI----VLMAFGIVMLANEQVTL 215 Query: 290 SMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTFGHLLG 343 + A D LT R+SF L + L D+D FK INDT+GH G Sbjct: 216 ELRAIAERDPLTGVFNRRSFLTLLDKSISHSDRMASPLSIMLIDLDHFKKINDTWGHKSG 275 Query: 344 DEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV--------HF 395 DE L V + I + + R GG+EFA++ + + ++ + + Sbjct: 276 DEALRHFVAVAVPCIR-NGDIIGRVGGEEFAILLPDTDISKAATVAERLRCEVAARPVKN 334 Query: 396 QVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISW 441 + GSI L+ SIGV H + E AD +Y +K GR Q+ Sbjct: 335 EHGSITLTVSIGVTHYRKDEAPEVTLHRADNAMYTAKDKGRNQVEV 380 >UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WIR5_CHLAA Length = 589 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 17/185 (9%) Query: 272 RVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCL 325 +L + + + + + + A D+LT R+ F + L E+ + + Sbjct: 395 ELLAATVAVALHNAFRFAQIQSQAITDNLTGLANRRHFLQVLHQEMERNRRYHTPVSIAM 454 Query: 326 FDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEEL 385 DVD FK INDTFGH+ GD VL ++ + + Q+ D + R+GG+EF +I T E+ Sbjct: 455 IDVDHFKQINDTFGHIAGDYVLREIARRCRQQLR-DVDVLARYGGEEFGLILPETTYEQA 513 Query: 386 LSILKEIVH--------FQVGSINLSTSIGVAHSNEC--PTVERLKMLADERLYKSKKNG 435 L + + IN + SIGVA + P L AD LY +K+ G Sbjct: 514 LKATERLRTVLATTPIMIDGRQINPTISIGVASFHPTVYPDPSSLIADADRALYLAKQQG 573 Query: 436 RAQIS 440 R ++ Sbjct: 574 RNRVC 578 >UniRef50_Q21GT7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21GT7_SACD2 Length = 346 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 121/315 (38%), Gaps = 16/315 (5%) Query: 143 YLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVS 202 + + ++ F L ++L K +M + ++ SL V + A F V Sbjct: 30 FFVSLVVINAVFFYLIYRGYNLRCKDHSMTAAQMIVSLVPTLYSVYFLDLGQARASFLVV 89 Query: 203 EAM-EHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVE 261 + + L F +++ + L+I S + +++ +V Sbjct: 90 AIVPLLYGMLALTTRTFLQIGILFIALYILMILLINKNRPDSINPTMEVLQAFALIVVVI 149 Query: 262 KEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK-- 319 + II + + + L + + A D+LT R+ E L ++ Sbjct: 150 QITIIGGYISGLRSKLRNRNKELNIALVKISDMANRDELTGIANRRKIFEVLDTEVKRKR 209 Query: 320 ----GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAV 375 +C+ DVD FK INDT+GH GDEVL ++ + + + R+GG+EF + Sbjct: 210 EPNTAIGICILDVDHFKRINDTYGHQAGDEVLKRIAEEVPKSLRT-MDCFGRYGGEEFLL 268 Query: 376 IYTGGTLEELLSILKEIVH----FQVGSI----NLSTSIGVAHSNECPTVERLKMLADER 427 I +LE + + ++ ++ SIG+A ++ AD+ Sbjct: 269 ILPSTSLEGTEIKANRVREEVAKLEFKNLPPGEKVTISIGIAEYFPEEEIDATIQRADKA 328 Query: 428 LYKSKKNGRAQISWQ 442 LY++K +GR Sbjct: 329 LYEAKAHGRNCCVVH 343 >UniRef50_Q0ACB8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACB8_ALHEH Length = 437 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 118/323 (36%), Gaps = 28/323 (8%) Query: 145 YPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEA 204 P+ L L ER +L + + + + + + Sbjct: 110 SPIWVEVLLTGLDRDERSKILVVWRDISRRKALEAEARAAQASLEAIIEHSPVGLLFLDG 169 Query: 205 MEHFAYL-PTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKE 263 + P L + Y+ + L T ++ + +G + ++R+ I + Sbjct: 170 ERRILHCNPAFLRMTGYRAEEVLGRTTAFLYTSHTDYEATGEAVYPVLRQGRTSEIEREF 229 Query: 264 AIINNHFERVLDGG--------------LFFSAADVKKLYS-MYNSAFLDDLTKAMGRKS 308 + V G + ++ K L + A D LT A+ R+ Sbjct: 230 VRADGEVITVSLLGRPLDPCDLSQGFVWVLQDISERKALQDALEREATFDQLTGALNRRR 289 Query: 309 FDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDK 362 ++ L E+ + L DVD FK +ND +GH +GD VL +++ K + Sbjct: 290 IEQALAREMERSNRHGDALSVALLDVDHFKRVNDQYGHNVGDRVLQTLIRRCKENLRA-V 348 Query: 363 GKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQV-----GSINLSTSIGVAHSNECPTV 417 + R+GG+EF ++ L + + + + ++ S+G+A + Sbjct: 349 DLIGRWGGEEFLIVLPDTDRHSALQLAERLRARIAERARADTHGVTVSLGLASFRPGEGL 408 Query: 418 ERLKMLADERLYKSKKNGRAQIS 440 ++L AD+ LY++K GR ++ Sbjct: 409 DQLVKRADDALYRAKDRGRNRVE 431 >UniRef50_A2SEJ2 Diguanylate cyclase n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SEJ2_METPP Length = 351 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 17/205 (8%) Query: 250 LVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSF 309 +++ V++ EA+ + LD A ++ + + A D LT R+SF Sbjct: 133 VLQGVVDSTREMSEAM--RQLQSRLDVNQREIAQLRAEVAAARSEAQTDSLTGLHNRRSF 190 Query: 310 DEDLKAL---PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVY 366 ++ + E L L D+D FK +NDT GHL GD+VLM V ++LK + D Sbjct: 191 EQHIAKFLADREAAMSLVLVDIDHFKLVNDTHGHLFGDQVLMAVARVLKESVRND-DLAA 249 Query: 367 RFGGDEFAVIYTGGTLEELLSILKEI-----------VHFQVGSINLSTSIGVAHSNECP 415 R GG+EFA++ L+ + + + I + + ++ S+GVA Sbjct: 250 RIGGEEFALLLPSTPLKGAVELAERIRTSIANSRIRRRNSEQQVGQITVSLGVADLWPSD 309 Query: 416 TVERLKMLADERLYKSKKNGRAQIS 440 E ADE LY SK+ GR +++ Sbjct: 310 NGESWFSRADEALYASKREGRNRVT 334 >UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6Y0_KANKD Length = 469 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 61/315 (19%), Positives = 106/315 (33%), Gaps = 45/315 (14%) Query: 143 YLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVS 202 + +T S+ LG + L+ ++ +I TV Sbjct: 177 WWRLLTEYLSISLFLGAVLWMLVQNIRGYMPLQYGIAMIWFALSCLSF------SIGTVW 230 Query: 203 EAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEK 262 + A++ IF + + + G +L + Sbjct: 231 DHQWWLAHI---------------------IFASGFLLLSFGVVQAFLTTGSFKTIYSQT 269 Query: 263 EAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKG-- 320 E E+ + A D LT+ R+ F + + + Sbjct: 270 ELFQQIIREKKKSERAL--IELKAVNQKLEELAATDSLTRVANRREFMKRSEEEMSRSSR 327 Query: 321 ----GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVI 376 L + D D FK IND +GH GD+VL VK+ K + + R GG+EFA++ Sbjct: 328 NSTDLCLMVIDFDHFKEINDQYGHQAGDKVLKDFVKLAKEVMR-PSDLLGRIGGEEFALL 386 Query: 377 YTGGTLEELLSILKEIVHFQVGS--------INLSTSIGVAHSNEC-PTVERLKMLADER 427 + + + + + I L+ SIGVA TV++ ADE Sbjct: 387 LPETNIRSAVKVAERLRQHIEEESIVIGSKRIKLTISIGVAEYQPKVDTVKKWLHRADEF 446 Query: 428 LYKSKKNGRAQISWQ 442 LY++K GR ++ + Sbjct: 447 LYQAKDKGRNRVVVE 461 >UniRef50_A8TQW5 GGDEF domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQW5_9PROT Length = 360 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 80/196 (40%), Gaps = 18/196 (9%) Query: 263 EAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKG-- 320 N L+ A K L + A D LT R F+ +L++ K Sbjct: 146 MEARNARLHGRLERSAEEIARLRKSLVATRREASTDGLTGLANRMQFERELRSAAAKAME 205 Query: 321 ----GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVI 376 L + D+D FK NDT+GH++GD+VL V ++L I RFGG+EF V+ Sbjct: 206 DGTTLCLLMADIDHFKTFNDTYGHMVGDQVLRLVGRVLIEAIR-PGDLAARFGGEEFVVV 264 Query: 377 YTGGTLEELLSILKEIVHFQVGSI-----------NLSTSIGVAHSNECPTVERLKMLAD 425 L+E I + I ++ S+GV V +L AD Sbjct: 265 LPECRLDEAARIAERIRERIGEKHVVRRSSGDDLGTVTLSLGVTAYQPGEVVGQLIERAD 324 Query: 426 ERLYKSKKNGRAQISW 441 LY +K+ GR +++ Sbjct: 325 TGLYDAKQAGRNRVAV 340 >UniRef50_C5BK03 Ggdef domain protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BK03_TERTT Length = 580 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 15/185 (8%) Query: 268 NHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GG 321 ++ S+ + L A D LT R++++E + + Sbjct: 387 QALLAKVESIESESSKTKELLEEERYRATHDSLTGLPNREAYNERVYQEYRRFTRYSRPL 446 Query: 322 YLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGT 381 + + D+D FK IND FGH GD VL + +++ +++ V R+GG+EF ++ + Sbjct: 447 GIAVCDIDHFKKINDNFGHQTGDRVLKLIARLISTRLR-KVDFVARYGGEEFVILLPETS 505 Query: 382 LEELLSILKEIV--------HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKK 433 + S+L +I F + ++ S G++ T+E AD+ LY++K Sbjct: 506 ASQSRSVLDKIRAAVAKAAFRFGDDPVKITLSFGISAFRSDDTIETAFQRADKALYQAKA 565 Query: 434 NGRAQ 438 +GR + Sbjct: 566 DGRNR 570 >UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii SH145 RepID=D0SXM5_ACILW Length = 440 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 79/369 (21%), Positives = 137/369 (37%), Gaps = 31/369 (8%) Query: 101 SDECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLE 160 +D ++ + Y D + + +++ ++ +Y+ + + F+ GL Sbjct: 43 TDPHARIPAPFQQYFHDYVYTHSHHNLRQINYL-AQIAFLLYFFADILIIPDMFFISGLM 101 Query: 161 RFSLLS-------------KSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEH 207 R L+ K++ + L G + + Sbjct: 102 RVVLVLGTMFCCYYLFKKHKNIQILDRILPIGTTVAAAAWIGLLALSISPHVATYIYASA 161 Query: 208 FAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIIN 267 L L V K + +F V+ AS ++ V + I Sbjct: 162 IFILIANLCVQTQFKVAVYCSILIALFIMLGVSQFMSASQAFIFSVVFSPLWFFSIYINW 221 Query: 268 NHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK-----GGY 322 N+ V L S D ++ N A DDLT+ R+ F + + + Sbjct: 222 NNILNVRRSFL-RSLLDEWNYQTLKNLAHTDDLTQLYNRRHFVDMAERSIHQWPKHASSC 280 Query: 323 LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL 382 L +FDVD FKNIND++GH +GD VL + ++ + ++ + RFGG+EF + L Sbjct: 281 LLMFDVDHFKNINDSYGHDVGDRVLQLIAEVTRKEMR-HSDVLARFGGEEFIALLEDTQL 339 Query: 383 EELLSILKEIVHFQVG---------SINLSTSIGVAHSNECPTV-ERLKMLADERLYKSK 432 ++ L I + I +I + SIGVA E L AD LY++K Sbjct: 340 QDSLVIAERIRCAIQKQYIYVEPNHTIRFTISIGVAELESHTQPLEDLIKQADIALYQAK 399 Query: 433 KNGRAQISW 441 K+GR +I Sbjct: 400 KSGRNRIEV 408 >UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZW4_HYPNA Length = 455 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 18/178 (10%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKN 333 + +++ + +D LT R+ + L+ ++ L + D+D FK Sbjct: 275 YIDILRQRVDRGLELSVIDQLTGLHNRRYMNGQLEQFMQRAARGNQPLSLMMTDIDHFKA 334 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 +NDT GH GD+VL ++ K L++ + V R GG+EF V+ + + + I Sbjct: 335 VNDTHGHQAGDDVLREIGKRLRANVR-PTDVVCRTGGEEFVVLMPNTPGDLACAAAERIR 393 Query: 394 HFQ----------VGSINLSTSIGVAHSNE-CPTVERLKMLADERLYKSKKNGRAQIS 440 ++ ++ S GV+ T + L AD LY++K GR ++ Sbjct: 394 KAVAAEEFPVLGGSQNLRITVSAGVSTLQGAGDTTDDLMHRADTALYQAKTGGRNRVE 451 >UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C0K6_ACAM1 Length = 449 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%) Query: 263 EAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDL------KAL 316 + F + + + + +Y A LD LT+ R+ F+ L Sbjct: 234 TLETQDEFNHLAETFNLMANQLEQSQQDLYRLATLDGLTEVYNRREFNRWLLVEIERSQR 293 Query: 317 PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVI 376 E L + D+D FK +NDT+GH GD L +V ++L+ ++ V R+GG+EF VI Sbjct: 294 GEHPVSLIMVDIDHFKRLNDTYGHQAGDLALCEVAQLLQREVR-PGDIVCRYGGEEFGVI 352 Query: 377 YTGGTLEELLSILKEIVHFQ---------VGSINLSTSIGVAHS-NECPTVERLKMLADE 426 T + I + I I+++ S+GVA + ERL AD+ Sbjct: 353 LPKATSADSWVIAERIRLAIAEKSVVLPSQQHIDMTASLGVATYPDHADCKERLVKQADQ 412 Query: 427 RLYKSKKNGRAQI 439 LY +K GR ++ Sbjct: 413 ALYTAKYQGRNRV 425 >UniRef50_B6BJC3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJC3_9PROT Length = 598 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 12/173 (6%) Query: 281 SAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNI 334 D+ + + D LT+ R DE + + D+D FK + Sbjct: 425 IRHDITDKKRIEELSITDRLTQLYNRLKLDEIFAMKLATAGRYNTNFSVIIIDIDYFKLV 484 Query: 335 NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH 394 NDT+GH GD+VL + +I+K+ + V R+GG+EF ++ + L+ + + +++ Sbjct: 485 NDTWGHQAGDDVLREFAEIIKNNAR-ETDIVGRWGGEEFLILSSDTDLDGAIKLSEKLRE 543 Query: 395 FQ-----VGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISWQ 442 + + S GV+ + + + ADE LY++K+NGR ++ + Sbjct: 544 MVSLFNFSFAGYKTASFGVSSYHPGDDEKTMVKRADEALYRAKENGRNRVEAE 596 >UniRef50_B0TJ24 Periplasmic/7TM domain sensor diguanylate cyclase n=4 Tax=Shewanella RepID=B0TJ24_SHEHH Length = 623 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 69/357 (19%), Positives = 127/357 (35%), Gaps = 36/357 (10%) Query: 115 CADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSE 174 ++ + +KY + V L+ + L L ++++ + + Sbjct: 263 FSEKVMRLKYHNQAMLRLCRVSAAMSVLLLF-IGLPLDYSTALNLNIYAVMLSCIMLMYM 321 Query: 175 NLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIF 234 +L + N A + + + L + K L + +IF Sbjct: 322 SLAQAFKGNKLAKLFAIGWAGMMLGALLSGAIYLGLLH---WDLQAKTPFILGLSIEVIF 378 Query: 235 FAALVAVISGASCLYLVR------------RVINRGIVEKEAIINNHFERVLDGGLFFSA 282 AAL+A+ L ++ + EA + +++ Sbjct: 379 MAALLAIRYNDERLAKLQIQQDALLQAKKAEETKEEALHIEARSSEKLAKMVQERTLELE 438 Query: 283 ADVKKL----YSMYNSAFLDDLTKAMGRKSFDEDL------KALPEKGGYLCLFDVDKFK 332 +++L + +D LT R SFD + + + + D+D+FK Sbjct: 439 IALRELNEANQKLTEQTRIDSLTGVKNRASFDRRILAEGRISRRQQAPLSILMLDIDRFK 498 Query: 333 NINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI 392 IND++GHL GD+ L + LK + V RFGG+EFA+I + + I Sbjct: 499 LINDSYGHLAGDQALRVIADQLKQILKRPTDLVSRFGGEEFAIILPNTDKIGAQQVAETI 558 Query: 393 VH--------FQVGSINLSTSIGVAH--SNECPTVERLKMLADERLYKSKKNGRAQI 439 + I L+ SIGV+ L AD+ LY++K +GR Q+ Sbjct: 559 RKVISKLPICWGGNRIRLTVSIGVSSEIITSEEHTTLLLEQADKALYQAKNDGRNQV 615 >UniRef50_A0LSI3 Diguanylate cyclase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSI3_ACIC1 Length = 517 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 11/215 (5%) Query: 236 AALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSA 295 LV + +G + ++ N + + A+ L + A Sbjct: 288 LLLVPMSAGNNVDGVLVAEHNARFGSRVDRRVVAMLERYASQTALALANSWLLEQITLLA 347 Query: 296 FLDDLTKAMGRKSFDEDLKA------LPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMK 349 D LT R++ +E+L + + + D+D FK+INDTFGH +GD+ L + Sbjct: 348 ATDMLTGVANRRTLEENLDRMFAQASRAAQPISVVMVDIDHFKHINDTFGHQVGDQTLQR 407 Query: 350 VVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVG---SINLSTSI 406 V + L+ V R+GG+EF V+ L + + + G ++ S+ Sbjct: 408 VARALQQGCRS-SDLVARYGGEEFVVVLPDTDLAGAATAAENLRRRIFGLDAEPRVTVSL 466 Query: 407 GVAHSN-ECPTVERLKMLADERLYKSKKNGRAQIS 440 GVA + + + AD LY+SK GR +++ Sbjct: 467 GVATFPLHGGSPDHILSAADAALYQSKSAGRNRVT 501 >UniRef50_B3QH74 Diguanylate cyclase n=14 Tax=Bradyrhizobiaceae RepID=B3QH74_RHOPT Length = 355 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 20/207 (9%) Query: 250 LVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSF 309 +V R++ ++A N+ E L A L ++ + D LT RK F Sbjct: 135 IVERLVVTTREMQQA--NSALEERLSTSKQEIANLQVSLDAIRAESLTDPLTGLGNRKHF 192 Query: 310 DEDLKALP------EKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKG 363 D ++ ++ L + D+D FK+ NDT+GHL GD+VL V LK I + Sbjct: 193 DRTVQEAIRNAGASQQPLSLLMMDIDHFKSFNDTYGHLTGDQVLRLVGMTLKQSI-KGQD 251 Query: 364 KVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGS-----------INLSTSIGVAHSN 412 R+GG+EFAV+ + + + + I + ++ S GV+ Sbjct: 252 FTARYGGEEFAVVLPNTPMRQAIIVADNIRRLVMSKELKKKSTGEILGRVTLSAGVSTLK 311 Query: 413 ECPTVERLKMLADERLYKSKKNGRAQI 439 E L AD LY +K+NGR ++ Sbjct: 312 PNDDAEALIERADACLYAAKRNGRNRV 338 >UniRef50_A1SVT3 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SVT3_PSYIN Length = 298 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 106/271 (39%), Gaps = 16/271 (5%) Query: 180 LFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALV 239 L+ N + + K+ I + F + +++ +Y + + + Sbjct: 26 LYCNNYICDLSDQSDKSLI---DNPLSKFVTKASNIFIDSYVYPLLMHQSCAQEIQITWI 82 Query: 240 AVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDD 299 + + ++ + I + + +++ L + K+ ++ A D Sbjct: 83 GKNGETIPVVVNIKLGSEDISYWSLYVCENRDKLHSELLKANEKLEKQSQELFRLATTDP 142 Query: 300 LTKAMGRKSFDEDLKALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKI 353 LT + R+ + + + L D+D FK +NDT+GH GD+VL+ + I Sbjct: 143 LTGLLNRRELQVQAQKVTHQAARNLSTFALLFIDIDFFKRVNDTYGHPAGDKVLICLANI 202 Query: 354 LKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVG----SINLSTSIG-- 407 L + V R GG+EFA++ E + + + I ++ SIG Sbjct: 203 LTQE-RRVTDIVARMGGEEFALLLPNIDEENAYKLAERLRKKIEKQTIDHIKITVSIGLV 261 Query: 408 VAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 V N + L LAD+ LY+SK+ GR + Sbjct: 262 VTRKNTQTNFDILLELADQALYESKEWGRNR 292 >UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgaris RepID=B8DLV9_DESVM Length = 381 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 107/287 (37%), Gaps = 18/287 (6%) Query: 168 SLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLR 227 + +++ S T Y + S + F + P + F + + Sbjct: 77 WVGRTGRHVLPSTALVLALFTLSLYMVSHGGVEGSGFVWLFIFPPVVMLTFG--LSIGIL 134 Query: 228 VCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKK 287 + ++ + + G LY R + F + + + + Sbjct: 135 LMGALLLGVGAILFLPGDPFLYADYSQAFRIRYMLALLCCGIFAGLAEYTRRHTQRLLIL 194 Query: 288 L-YSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLFDVDKFKNINDTFGH 340 L + SA D+LT R++ E L+ + + + D+D FK++ND +GH Sbjct: 195 LTQQLAESARTDELTGLANRRALCERLEYEQVRARRTGRPLSIAICDIDHFKSVNDCYGH 254 Query: 341 LLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV------- 393 GD VL V +L + + + R+GG+EF ++ + +++ Sbjct: 255 QCGDLVLQSVAGLLHDNLR-HQDTICRWGGEEFLLLLPETDEAGAARLAEKLRSLVEAME 313 Query: 394 -HFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQI 439 + ++++ S GV ++ AD++LY +K+ GR ++ Sbjct: 314 YSYHGIPVSVTLSFGVHTCGPEGDIDYHIRKADQKLYLAKEQGRNRV 360 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 17/177 (9%) Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKN 333 + + + D LT R+ E + ++ L + D+D FK Sbjct: 127 LQDELKRSNEMLRTLSITDPLTHLHNRRHLMEMVDKEFQRSSRKGAPLSLVILDIDYFKK 186 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 INDT+GH GD VL + I++ ++ R+GG+EF ++ ++E LSI + + Sbjct: 187 INDTYGHQEGDRVLTILADIVRRRLRS-YDLAARYGGEEFVLLLPETPVQEALSIAERLR 245 Query: 394 --------HFQVGSINLSTSIGVAHSNEC--PTVERLKMLADERLYKSKKNGRAQIS 440 +G + ++ S+GVA +++ L ADE LY++K+ GR ++ Sbjct: 246 LEVQEHVFEGSLGGLVITISLGVATYPSSRVESIDSLFRQADEALYRAKQGGRNRVE 302 >UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvestris BL2 RepID=B8EJQ5_METSB Length = 738 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 13/232 (5%) Query: 220 YKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLF 279 + + + + +A + L +V ++ + + + Sbjct: 491 FVRRRFANDSEWSLVLTIPMAELFANRVLGIVITLLATLMAL-IYLFGKERSVYDSVQMD 549 Query: 280 FSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL------PEKGGYLCLFDVDKFKN 333 + S+ A D LT R FD+ L A + L LFD+D FKN Sbjct: 550 KRLKLQELARSLEFQASTDPLTGLFNRMKFDQALAAEILRANRYNRPLSLVLFDIDHFKN 609 Query: 334 INDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV 393 IND GH +GD VL+++ +I + I + R+GG+EF ++ + + + Sbjct: 610 INDLHGHQVGDNVLVQLSRIAAAHIR-GTDVLARWGGEEFVILVPESNGQMAYQTAENLR 668 Query: 394 HFQVGSI-----NLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 + ++ ++ S GVA + E L AD +Y++K GR Q Sbjct: 669 NAIGQAVFEKAGAVTCSFGVAEYVDGDAAESLISRADAAMYRAKIKGRNQAE 720 >UniRef50_A1AK83 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AK83_PELPD Length = 304 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 17/216 (7%) Query: 239 VAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLD 298 + +++ + ++R IN G+ + N F+ L L A + ++ +A D Sbjct: 88 ILLLTAFEDVDYLKRSINIGVDKYVTKPVNGFQ--LHETLLECAHSLLAEEALQCAARTD 145 Query: 299 DLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVK 352 LT R F + + + D+D FK++NDTFGH GD VL V Sbjct: 146 HLTGIANRWEFINRFNTEKGRAERHGTPLSIIIADIDHFKSVNDTFGHNAGDRVLRSVAN 205 Query: 353 ILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH--------FQVGSINLST 404 + S I V+ R+GG+EF ++ L+ + +++ ++ SI ++ Sbjct: 206 AISSSIRVE-DACGRWGGEEFMLLLPDTNLDAAARVAEKLRQAVSELSIPWEGESIAVTL 264 Query: 405 SIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 S+GV T++ D LY++K GR ++ Sbjct: 265 SMGVGQFRPGMTLDECIQPVDHALYRAKTGGRNRVE 300 >UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TWE2_ACIAC Length = 377 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%) Query: 119 MQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMF 178 + + +R+ + F + ++ ++ + L+ A + Sbjct: 24 LVRMNHRNRTFFYALLFLALGAHFRHTGAGPAVWVVLVVQFLVYPQLAYWTARSAPRQAK 83 Query: 179 SLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAAL 238 + +N + D + + L G + Y + L+ Sbjct: 84 AELRN---MVVDNLFGGLWAGLLGMPVWITFTLFIGNCINVVAFHGYPGLLRLVAAMGCG 140 Query: 239 VA--------------VISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAAD 284 + + + S L ++ + + + ++ + L + Sbjct: 141 LLGGLVLYGDRPLHPDIDTATSLLCILALTLFLTVFAHTSYRRAMEQQKSNDRLREQFEE 200 Query: 285 VKKLY-SMYNSAFLDDLTKAMGRKSFDEDLKALPEK------GGYLCLFDVDKFKNINDT 337 ++ L + A D LT R+ D L + + L + D+D FK INDT Sbjct: 201 IRALQDQLQEQAVRDPLTGLYNRRHLDATLASEIARCGAQGLPLSLMMIDIDHFKRINDT 260 Query: 338 FGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIV---- 393 GH GD +L + ++L+ + V + R GG+EF ++ L + + Sbjct: 261 HGHAAGDAMLQALAQLLQRHVRV-RDLACRLGGEEFVLLLPETPLAVARERAEALREAFE 319 Query: 394 ----HFQVGSINLSTSIGV-AHSNECPTVERLKMLADERLYKSKKNGRAQISWQ 442 ++ + S GV A L ADE LY +K GR ++ Q Sbjct: 320 ALQVRHDPEVLSATLSCGVAAFPQHARQPLALTASADEALYAAKMQGRNRVVVQ 373 >UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobacterineae RepID=Q1D632_MYXXD Length = 710 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 16/185 (8%) Query: 269 HFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSF----DEDLKA--LPEKGGY 322 V+ + + M A D LT ++F DE L ++ Sbjct: 507 RMIEVIAIQAAQAVLRAQLYEQMERMATTDGLTGLYNHRTFQAKADEVLAQSRRYQRKFS 566 Query: 323 LCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTL 382 L L DVD FK++NDT+GH GD+VL V +I+K+ D V R+GG+EF +I Sbjct: 567 LILTDVDHFKSVNDTYGHPTGDQVLKGVARIIKTMAR-DTDIVARYGGEEFVIIMPETDA 625 Query: 383 EELLSILKEIVHF--------QVGSINLSTSIGVAH-SNECPTVERLKMLADERLYKSKK 433 + +I + I ++G + ++ S+G+A + ++L LAD+ LY SK+ Sbjct: 626 KGAFTISERIREAVKAEVFQTEMGPLRITMSLGIATFPDSAMEKQQLIDLADQCLYHSKR 685 Query: 434 NGRAQ 438 NGR Q Sbjct: 686 NGRNQ 690 >UniRef50_B5R8P2 Predicted phage protein n=28 Tax=Enterobacteriaceae RepID=B5R8P2_SALG2 Length = 381 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 64/333 (19%), Positives = 119/333 (35%), Gaps = 27/333 (8%) Query: 133 ISFDGKTFVYYL--YPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMF--------SLFK 182 ISF ++ + S + ++ + L+F + Sbjct: 46 ISFALIILFRHILISDFDKSISAQTGILPLIDDIMGSIIVFSFLILLFIYRLPARFTPLC 105 Query: 183 NGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFA-----A 237 + + + F + FA+ + + + +Y + L+ F A Sbjct: 106 LVMLLILSLMWSYCSYFFIVWWQLPFAWPLSVILMLTALAALYYHLPALLFFIVPLWLTA 165 Query: 238 LVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFL 297 L+A + + + ++ + +R D + + + A Sbjct: 166 LLASVQLNQYVNIRFLLVWLTLTTILIYGRFILQRWFDEAWLRYQENRMLIARLDVMAHQ 225 Query: 298 DDLTKAMGRKSFDEDLKALPEK--GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILK 355 D LT R+S + L + L + DVD FKN ND +GH GD L KV ++K Sbjct: 226 DALTGTANRRSMESFLGDALRQTEPFALIMLDVDYFKNYNDHYGHQAGDACLAKVAGVMK 285 Query: 356 SQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI----VHFQVGSI------NLSTS 405 + V R+GG+EF V+ +L E + + I + ++ S Sbjct: 286 RSVRTPADLVARYGGEEFVVVLPSSSLNEAALVAERIQTNLRETAMPHAASAVSETVTVS 345 Query: 406 IGVAHSNECPTVERLKMLADERLYKSKKNGRAQ 438 +G+ S TV + ADE LY++K+ GR + Sbjct: 346 MGITLSTAGDTVTGIIARADEALYRAKQQGRNR 378 >UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica RepID=A9L0C9_SHEB9 Length = 466 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 105/302 (34%), Gaps = 21/302 (6%) Query: 157 LGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLY 216 L + + + +F+ + + N+ + + L Sbjct: 149 LKYWLWGFVLIPVLCSLALALFATWGSHWLPILIAKNSYKQLLHS--PYALLVWGLNALA 206 Query: 217 VFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDG 276 + + AL+A + + + G + +L Sbjct: 207 LVCMIRRARSNNVLYTWLSVALLASLIDVTLTLFAGARFSLGWYAARISSSVSSMVLLCA 266 Query: 277 GLFFSAAD----VKKLYSMYNSAFLDDLTKAMGRKSFDEDLK------ALPEKGGYLCLF 326 L+ + S+Y + D LT R+ + L ++ L + Sbjct: 267 LLWEVNRLYVATQRANESLYQQSVKDTLTGLFNRRYLESQLAIHIDHAKRHKEPLCLLVL 326 Query: 327 DVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELL 386 DVD FK ND GHL GD+ L+ V K L+ + + R+GG+EF V+ ++ + Sbjct: 327 DVDHFKAFNDQHGHLAGDDCLVTVAKQLEQSLYRPADFIARYGGEEFIVVLPHTDAKDGM 386 Query: 387 SILKEIV--------HFQVGSINLSTSIGVAHSNE-CPTVERLKMLADERLYKSKKNGRA 437 I + + +Q ++++ SIG A T + L + AD LY++K GR Sbjct: 387 QIAERLRLNVSAEKIEYQGQLLSVTISIGCAVLRHSEETAQSLLIAADSALYQAKAAGRN 446 Query: 438 QI 439 + Sbjct: 447 CV 448 >UniRef50_Q21ED1 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21ED1_SACD2 Length = 476 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 75/345 (21%), Positives = 116/345 (33%), Gaps = 33/345 (9%) Query: 128 KNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPV 187 K + ++++ T S + L GL S+ + V Sbjct: 115 KQVQDVIAFSVIALFWVVSPTIGVSALALAGLVESGAFSRVWLTWWLGDSIGILLLTPLV 174 Query: 188 TGDEYNAKNAIFTVSEAMEHFAYL--PTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGA 245 + + T L + T I F AA + G Sbjct: 175 LIVNITHWRNLLNNDGYKLVVGIVGAATASLAVYASGLPLLYLLTGICFMAAYRLSLFGV 234 Query: 246 SCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSM-------------- 291 + LV I + HF + GL + S+ Sbjct: 235 IVVNLVIATITSSAYMWQVGPGAHFAAPIQLGLIQLFLAFNMVISLVFWCTQSRNRELSV 294 Query: 292 -----YNSAFLDDLTKAMGRKSFDEDLKA--LPEKGGYLCLFDVDKFKNINDTFGHLLGD 344 A LD LTK R+ F+E ++ L + D+D FK +ND +GH +GD Sbjct: 295 KWSRAETQARLDPLTKIYNRRGFEERAIQLMRQKRTLSLLILDIDHFKYVNDHYGHDIGD 354 Query: 345 EVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQ-------- 396 EVL + K + I D R GG+EFAVI LE + + I Sbjct: 355 EVLRQFSKKIAGMIR-DSDVFARIGGEEFAVILADQNLELAGLMAERIRATIESTELPVS 413 Query: 397 -VGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQIS 440 +I + SIGV+ +E + R D+ LY++K GR Q++ Sbjct: 414 SDNTIKYTVSIGVSSVSEGVDIHRWLKTTDKLLYQAKAQGRNQVA 458 >UniRef50_Q2BMX5 GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMX5_9GAMM Length = 344 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 17/200 (8%) Query: 257 RGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKAL 316 + F+ ++ + ++L A +D LT R++FD +L + Sbjct: 141 STHTRSISDTARMFQERMEQAQAEIESLKEELNKTRQDARVDPLTNLFNRRAFDAELAQV 200 Query: 317 -----PEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGD 371 E L L D+D FK NDT+GHL+GD+VL V K+LK RFGG+ Sbjct: 201 VGLNGSEFTSSLVLVDIDHFKKFNDTYGHLMGDKVLQYVGKLLKDICLEPM-LPVRFGGE 259 Query: 372 EFAVIYTGGTLEELLSILKEIV---------HFQVGSI--NLSTSIGVAHSNECPTVERL 420 EFAV+ G + E+ I +++ + G I +++ S GV+ + TVE+L Sbjct: 260 EFAVLMPGTSKEQAFEIAEKVRLKIQAIRIKQKKSGDIISSITASFGVSQLTDAETVEQL 319 Query: 421 KMLADERLYKSKKNGRAQIS 440 D+ LY++K NGR Q+ Sbjct: 320 IERTDQALYQAKNNGRNQVV 339 >UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desulfovibrio RepID=Q310L5_DESDG Length = 525 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 17/190 (8%) Query: 267 NNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEK------G 320 L + + M A D LT+ R+ FD L+ ++ Sbjct: 323 QVQVLHSAMRHLALAVKNALLFREMRLQADHDGLTQLHNRRHFDTRLREELDRHGRYSMP 382 Query: 321 GYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGG 380 L + D+D FK IND FGH GD VL ++ +L+ I R+GG+EF I Sbjct: 383 LTLMMLDIDYFKQINDRFGHQAGDAVLRELASVLRETIRT-TDYCARYGGEEFVAILPHT 441 Query: 381 TLEELLSILKEIV--------HFQVGSINLSTSIGVAHSNEC--PTVERLKMLADERLYK 430 ++ + + + +I + SIG+ + L AD LY Sbjct: 442 DEQQARVLAERLRKNIESRVFRHHGKTIQATVSIGLTGFKPGALTPRDELVREADAALYL 501 Query: 431 SKKNGRAQIS 440 +K NGR + Sbjct: 502 AKANGRNVVC 511 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.146 0.459 Lambda K H 0.267 0.0447 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,472,778,914 Number of Sequences: 3077464 Number of extensions: 129068274 Number of successful extensions: 421941 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 17950 Number of HSP's successfully gapped in prelim test: 7135 Number of HSP's that attempted gapping in prelim test: 339312 Number of HSP's gapped (non-prelim): 27609 length of query: 442 length of database: 1,040,396,356 effective HSP length: 132 effective length of query: 310 effective length of database: 634,171,108 effective search space: 196593043480 effective search space used: 196593043480 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 95 (41.1 bits)