 |
| Job Description | P0AFR2 | | Confidence | 15.83% | Date | Thu Jan 5 11:27:02 GMT 2012 |
| Rank | 92 | Aligned Residues | 50 |
| % Identity | 4% | Template | c3u5cH_ |
| PDB info |
PDB header:ribosome | Chain: H: PDB Molecule:40s ribosomal protein s7-a; |
PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution
|
| Resolution | 3.00 Å |
|
|   |   |
509 | 510 | . | . | . | . | . | |
. | . | |
|
. | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  | . |  |
| . | . |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
| . |
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | R | F | V | K | R | L | . |
P | E | . |
. |
G | C | E | L | R | V | C | N | V | E | F | Q | P | L | R | T | M | A | R | A | G | I | Q | P | I | P | G | R | L | A | F | F | P | N | R | R | A | A | M | A | D |
| Query Conservation |   |
  |   |
|   |   |   |   | . |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
| . |
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|
|   |
|
|
|
|
|   |   |
|   |   |
|   |
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Sequence |   |
T | K | L | T | R | E | L | E | K | K | F | Q | D | R | H | V | I | F | L | A | E | R | R | I | L | P | K | P | S | R | T | S | R | Q | V | Q | K | R | P | R | S | R | T | L | T | A | V | H | D | K | I | L | E |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| S | S | S |
|
|
| S |
|
|
| G | G | G | S |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|