Phyre 2 alignment of P39408 with d1j6oa_

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Job Description | P39408
Confidence | 100.00% | Date | Thu Jan 5 12:00:44 GMT 2012
Rank | 6 | Aligned Residues | 254
% Identity | 28% | Template | d1j6oa_
SCOP info | TIM beta/alpha-barrel | Metallo-dependent hydrolases | TatD Mg-dependent DNase-like
Resolution | 1.80

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | C | R | F | I | D | T | H | C | H | F | D | F | P | P | F | S | G | D | E | E | A | S | L | Q | R | A | A | Q | A | G | V | G | K | I | I | V | P | A | T | E | A | E | N | F | A | R | V | L | A | L | A | E | N | Y | Q | P | L | Y | A | A | L | G | L | H | P | G | M | L | E | K | H | S | D | V | S | L | E | Q | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | H | H | H | X | V | D | T | H | A | H | L | H | F | H | Q | F | D | D | D | R | N | A | V | I | S | S | F | E | E | N | N | I | E | F | V | V | N | V | G | V | N | L | E | D | S | K | K | S | L | D | L | S | K | T | S | D | R | I | F | C | S | V | G | V | H | P | H | D | A | K | E | V | P | E | D | F | I | E | H | L
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T | T | S | G | G | G | T | T | T |  |  |  |  |  |  | T | T | T | T | T | T |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |  | T | T |  |  |  |  |  |  |  |  | G | G | G | G | G | G |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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