17/01/2012 17:33:35 : INFO  : Run start: Tue Jan 17 17:33:32 GMT 2012
17/01/2012 17:33:45 : INFO  : Initialised job
17/01/2012 17:33:50 : INFO  : Renaming log file 'phyre2_20120117_173331.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/db8b4bbb467a679f/phyre_20120117_173331.log'
17/01/2012 17:33:53 : INFO  : Initialised job:
Sequence
>batch____
MICRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLY
AALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQL
KLAKRYDLPVILHSRRTHDKLAMHLKRHDLPRTGVVHGFSGSLQQAERFVQLGYKIGVGG
TITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRREP
ADEIAQALLNNTYTLFNVP

17/01/2012 17:33:55 : INFO  : Checked sequence
17/01/2012 17:34:01 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 17:34:04 : INFO  : PSI-BLAST 3 iterations
17/01/2012 17:36:00 : INFO  : PSI-BLAST 5 iterations
17/01/2012 17:37:47 : INFO  : Finished PSI-BLAST
17/01/2012 17:37:51 : INFO  : Running Buildali to generate a3m file
17/01/2012 17:48:25 : INFO  : Converting to HMM
17/01/2012 17:48:30 : INFO  : Calibrating HMM
17/01/2012 17:48:52 : INFO  : Searching HMM database
17/01/2012 17:53:51 : INFO  : Finished buildali
17/01/2012 17:53:54 : INFO  : Predicting secondary structure
17/01/2012 17:54:13 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 17:54:16 : INFO  : Predicting Disordered regions
17/01/2012 17:54:24 : INFO  : Predicted Disorder (Disopred)
17/01/2012 17:54:27 : INFO  : Running memsat_svm check
17/01/2012 17:58:18 : INFO  : Globular protein
17/01/2012 17:58:21 : INFO  : Predicted Transmembrane (memsat_svm) ID 'db8b4bbb467a679f'
17/01/2012 17:58:25 : INFO  : Initialising fold library search
17/01/2012 17:58:32 : INFO  : Initialised search input
17/01/2012 17:58:37 : INFO  : Building Ensemble models
17/01/2012 17:58:44 : INFO  : Building hh.d1zzma1.model.1.pdb
17/01/2012 17:59:19 : INFO  : Building d1zzma1.1.pdb
17/01/2012 17:59:51 : INFO  : Building c2gzxB_.2.pdb
17/01/2012 18:00:24 : INFO  : Building c3ipwA_.3.pdb
17/01/2012 18:00:58 : INFO  : Building d1xwya1.4.pdb
17/01/2012 18:01:29 : INFO  : Building c3rcmA_.5.pdb
17/01/2012 18:01:59 : INFO  : Building d1j6oa_.6.pdb
17/01/2012 18:02:31 : INFO  : Building c2xioA_.7.pdb
17/01/2012 18:03:02 : INFO  : Building c2y1hA_.8.pdb
17/01/2012 18:03:33 : INFO  : Building c3e2vA_.9.pdb
17/01/2012 18:04:04 : INFO  : Building d1yixa1.10.pdb
17/01/2012 18:04:35 : INFO  : Building c3gg7A_.11.pdb
17/01/2012 18:05:05 : INFO  : Building c3irsB_.12.pdb
17/01/2012 18:05:38 : INFO  : Building d2f6ka1.13.pdb
17/01/2012 18:06:10 : INFO  : Building c2wm1A_.14.pdb
17/01/2012 18:06:43 : INFO  : Building d2dvta1.15.pdb
17/01/2012 18:07:13 : INFO  : Building d2ffia1.16.pdb
17/01/2012 18:07:44 : INFO  : Building c3nurA_.17.pdb
17/01/2012 18:08:16 : INFO  : Building d2gwga1.18.pdb
17/01/2012 18:08:47 : INFO  : Building c3guwB_.19.pdb
17/01/2012 18:09:20 : INFO  : Building c3ij6A_.20.pdb
17/01/2012 18:10:31 : INFO  : Finished HH model building
17/01/2012 18:10:34 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 18:11:45 : INFO  : html domain output complete ID 'db8b4bbb467a679f'
17/01/2012 19:22:05 : INFO  : Run end  : Tue Jan 17 19:22:02 GMT 2012
