21 c3cjpA_ Probab=99.97   E-value=2.5e-29  Score=180.24  Aligned_columns=219  Identities=16%

Q ss_pred             EEEECCCCCCHHHCCCHHHHHHHHHHCCCCEEEEECCCH----------------------------------HHHHHHH
Q ss_conf             899702478625408889999999976998999917998----------------------------------8999999
Q batch____         5 FIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEA----------------------------------ENFARVL   50 (259)
Q Consensus         5 iID~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~~----------------------------------~~~~~~~   50 (259)
                      |||+|+|++.     ..++.++.|++.|+++.+..+...                                  ...+.+.
T Consensus         2 IID~H~Hl~~-----~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (262)
T c3cjpA_           2 IIDGHTHVIL-----PVEKHIKIMDEAGVDKTILFSTSIHPETAVNLRDVKKEMKKLNDVVNGKTNSMIDVRRNSIKELT   76 (262)
T ss_dssp             CEEEEEECCS-----SHHHHHHHHHHHTCCEEEEECCSCCGGGCCSHHHHHHHHHHHHHHHTTSSTTCHHHHHHHHHHHH
T ss_pred             EEEEEEECCC-----CHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHCCCEEEECCCCCCCCHHHHHHHH
T ss_conf             6899850269-----78999999997699569983587885783108999984222035516630653222136789999


Q ss_pred             HHHHHHCCCCEEHCCCCCCCCCCCCCCHHHHHHHHHHCCHHEEECEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEE
Q ss_conf             99985076303100245654668813889899999830100121205687735885762126088999999999729879
Q batch____        51 ALAENYQPLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPV  130 (259)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~a~~~~~pv  130 (259)
                      +....+..........+.....         .....+....+...|++|++.+...   ..+++.++++++.|.+++.++
T Consensus        77 ~~~~~~~~r~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~gi~~~~~~---~~~~~~~~~~~~~~~~~~~~~  144 (262)
T c3cjpA_          77 NVIQAYPSRYVGFGNVPVGLSE---------NDTNSYIEENIVNNKLVGIGELTPA---SGQIKSLKPIFKYSMDSGSLP  144 (262)
T ss_dssp             HHHHHSTTTEEEEECCCTTCCH---------HHHHHHHHHHTTTTTCSEEEEECCC---TTCGGGGHHHHHHHHHTTCCC
T ss_pred             HHHHHHCCCCCCCEEECCCCCC---------HHHHHHHHHHHCCCCEEEEEECCCC---CCCCHHHHHHHHHHHHCCCCE
T ss_conf             9976302750022021257880---------6899999997124875089845887---678853899999999649955


Q ss_pred             EEECCCC------HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHC--CCEEEECCCCCCCCHHHHHHHHHHCCCCCE
Q ss_conf             9945889------89999999962899799998799988999999978--984651244466895799999995598509
Q batch____       131 ILHSRRT------HDKLAMHLKRHDLPRTGVVHGFSGSLQQAERFVQL--GYKIGVGGTITYPRASKTRDVIAKLPLASL  202 (259)
Q Consensus       131 ~iH~~~~------~~~~~~~~~~~~~~~~vi~H~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dri  202 (259)
                      .+|....      +..+..+++++|++++++.|+|+++.....++...  |+|++++....    ..+.++++.+|.+|+
T Consensus       145 ~~~h~~~~~~~~~~~~~~~~~~~~P~~~~i~~H~g~~~~~~~~~~l~~~~n~y~d~s~~~~----~~~~~~~~~~g~dri  220 (262)
T c3cjpA_         145 IWIHAFNPLVLQDIKEIAELCKAFPKVPVILGHMGGSNWMTAVELAKEIQNLYLDTSAYFS----TFVLKIVINELPLKC  220 (262)
T ss_dssp             EEECCSTTCCHHHHHHHHHHHHHSTTSCEEEGGGGGGGHHHHHHHHHHCTTEEEECTTCSC----HHHHHHHHHHSTTTE
T ss_pred             EEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCH----HHHHHHHHHHCCCEE
T ss_conf             9992688777589899999999689985899628877889999999604556170122688----999999985092319


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             99408987775333566688889999999999760999899999998869998467
Q batch____       203 LLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRREPADEIAQALLNNTYTLFNV  258 (259)
Q Consensus       203 l~gSD~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~i~~~Na~rl~gL  258 (259)
                      |||||||+          ..+......++.+    ++|++++++|+++||+|||||
T Consensus       221 l~GSD~P~----------~~~~~~~~~~~~~----~l~~~~~~~i~~~Na~rl~~l  262 (262)
T c3cjpA_         221 IFGTDMPF----------GDLQLSIEAIKKM----SNDSYVANAVLGDNISRLLNI  262 (262)
T ss_dssp             ECCCCTTS----------SCHHHHHHHHHHH----CSSHHHHHHHHTHHHHHHHTC
T ss_pred             EEECCCCC----------CCHHHHHHHHHHC----CCCHHHHHHHHHHHHHHHHCC
T ss_conf             99038689----------9989999999947----989899999971339999585