 |
| Job Description | P77377 | | Confidence | 8.67% | Date | Thu Jan 5 12:28:20 GMT 2012 |
| Rank | 22 | Aligned Residues | 34 |
| % Identity | 15% | Template | d1r6ra_ |
| SCOP info | Flavivirus capsid protein C
| Flavivirus capsid protein C
| Flavivirus capsid protein C
|
| Resolution | UNK |
|
|   |   |
456 | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | V | L | A | F | V | V | M | I | V | L | S | R | H | P | L | V | V | E | V | K | R | Q | F | C | R | S | E | K | M | K | M | L | L |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|   |
|
|
|
|
|
|
|
|   |   |
|
|
|   |   |   |   |
|
|   |
|
|
|
|
|   |   |
|
|
| Template Sequence |   |
L | F | M | A | L | V | A | F | L | R | F | L | T | I | P | P | T | A | G | I | L | K | R | W | G | T | I | K | K | S | K | A | I | N |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|  |  |  |  |  |  |  | T | S | S |
| S |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|