315 c3cphA_ Probab=96.53   E-value=0.051  Score=30.45  Aligned_columns=156  Identities=13%

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHCCCCEEEEEEEEEECCCCCCCCCEEEEEEEC
Q ss_conf             01799982788998888999999819643245024771550486789860852875389998067776556438999817
Q batch____        10 YRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDT   89 (704)
Q Consensus        10 IRNI~Iighvd~GKTTL~d~Ll~~~g~i~~~g~~~~~~~~~D~~~~E~eRgITikss~is~~~~~~~~~~~~~~inlIDt   89 (704)
                      +-+|+|+|..++|||||+.+|+...-........                +.+........        .........+.
T Consensus         1 ~~KI~ivG~~~vGKTsli~r~~~~~f~~~~~~t~----------------~~~~~~~~~~~--------~~~~~~~~~~~   56 (175)
T c3cphA_           1 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTI----------------GIDFKIKTVDI--------NGKKVKLQLWD   56 (175)
T ss_dssp             CEEEEEECSTTSSHHHHHHHHHHCCCCCSSSCCC----------------SCCEEEEEEEE--------TTEEEEEEEEC
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCE----------------EEEEEEEECCC--------CCEEEEEECCC
T ss_conf             9799998798999999999998184688655403----------------66677520233--------10146530223


Q ss_pred             CCCHHHHHHHHHHHHHHCEEEEEEECCCC-----CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCC
Q ss_conf             97234689999998861668999975778-----8778999999999729988999826566799988839999986057
Q batch____        90 PGHVDFTIEVERSMRVLDGAVMVYCAVGG-----VQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKTRLGA  164 (704)
Q Consensus        90 PGH~DF~~ev~~al~~~DgailvVDa~eG-----v~~qT~~~l~~~~~~~ip~ilviNKiDr~~~~l~~~~~ei~~~l~~  164 (704)
                      .+..+..............++..+....-     ....-............+.++..||.|...........+...+   
T Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---  133 (175)
T c3cphA_          57 TAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALAK---  133 (175)
T ss_dssp             CTTGGGGTCCCHHHHTTCSEEEEEEETTCHHHHHTHHHHHHHHHHHTTTCSEEEEEEECTTCSSCCSCHHHHHHHHH---
T ss_pred             CCCCCHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHCCHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHH---
T ss_conf             32120011124543100000110222244102444321000000012332201102453220002344279999999---


Q ss_pred             CEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
Q ss_conf             70342465306774011686124423540475577124201258788998888999999998723488999883788879
Q batch____       165 NPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGGEELT  244 (704)
Q Consensus       165 ~~~~~~~~i~~~~~~~g~~~~~~~~~~~f~~~~~g~~~~~~~~~~~~~~~~~~~~~~lve~~~~~~~~l~~~~l~~~~~~  244 (704)
                                                                                                      
T Consensus       134 --------------------------------------------------------------------------------  133 (175)
T c3cphA_         134 --------------------------------------------------------------------------------  133 (175)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf             899998887632158725898730015887167888898707
Q batch____       245 EAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYL  286 (704)
Q Consensus       245 ~~~l~~~l~~~~~~~~~~~~~~~sa~~~~gv~~ll~~i~~~l  286 (704)
                                    ....+.+..||.++.|+..+++.+...+
T Consensus       134 --------------~~~~~~~e~SAktg~gI~e~f~~i~~~i  161 (175)
T c3cphA_         134 --------------ELGIPFIESSAKNDDNVNEIFFTLAKLI  161 (175)
T ss_dssp             --------------HHTCCEEECBTTTTBSSHHHHHHHHHHH
T ss_pred             --------------HCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             --------------7598299963689989899999999999