333 c1nijA_ Probab=95.97   E-value=0.042  Score=30.92  Aligned_columns=155  Identities=21%

Q ss_pred             CCEEEEEEECCCCCCHHHHHHHHHHHC-CCCCCCCCCCCCCEEECCCHHHHHCCCCEEEEEEEEEECCCCC---------
Q ss_conf             010179998278899888899999981-9643245024771550486789860852875389998067776---------
Q batch____         8 ARYRNIGISAHIDAGKTTTTERILFYT-GVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAK---------   77 (704)
Q Consensus         8 ~~IRNI~Iighvd~GKTTL~d~Ll~~~-g~i~~~g~~~~~~~~~D~~~~E~eRgITikss~is~~~~~~~~---------   77 (704)
                      ++|--.-|-|-.++|||||+.+||... |.--..-..+-|..-.|....+..-.-.+....-.+.-.....         
T Consensus         1 ~~ipv~iitGfLGaGKTTll~~ll~~~~~~~~avi~Nefg~~~iD~~ll~~~~~~v~~l~~GCiCC~~~~~~~~~l~~l~   80 (317)
T c1nijA_           1 NPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLL   80 (317)
T ss_dssp             CCEEEEEEEESSSSSCHHHHHHHHHSCCCCCEEEECSSCCSCCEEEEEECTTSCEEEEETTSCEEECTTSCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCEECCCHHHHHHHHHHHH
T ss_conf             97618998089888988999999842699738999716644420588984079729997799542132477899999999


Q ss_pred             -----CCCCEEEEEEECCCCHHHHH--------HHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             -----55643899981797234689--------99999886166899997577887789999999997299889998265
Q batch____        78 -----QYEPHRINIIDTPGHVDFTI--------EVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKM  144 (704)
Q Consensus        78 -----~~~~~~inlIDtPGH~DF~~--------ev~~al~~~DgailvVDa~eGv~~qT~~~l~~~~~~~ip~ilviNKi  144 (704)
                           ....+-.=+|.|.|-.|...        +..+.....|+.+.|||+..+.. +....=....+...-=++++||.
T Consensus        81 ~~~~~~~~~~d~i~IE~sG~a~p~~i~~~l~~~~~l~~~~~l~~vi~vvD~~~~~~-~~~~~~~~~~Qi~~Ad~ivlnk~  159 (317)
T c1nijA_          81 DNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADE-QMNQFTIAQSQVGYADRILLTKT  159 (317)
T ss_dssp             HHHHHTSCCCSEEEEEEETTCCHHHHHHHHHHSHHHHHHEEEEEEEEEEETTTHHH-HHHHCHHHHHHHHTCSEEEEECT
T ss_pred             HHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEECHHHHH-HHHHHHHHHHHHHHCCEEEEECC
T ss_conf             84125546866899808875798999988630820113089801789974026777-66322556445310778996055


Q ss_pred             CCCCCCHHHHHHHHHHHHCCC
Q ss_conf             667999888399999860577
Q batch____       145 DRMGANFLKVVNQIKTRLGAN  165 (704)
Q Consensus       145 Dr~~~~l~~~~~ei~~~l~~~  165 (704)
                      |+....  ..+.+.-..++..
T Consensus       160 D~~~~~--~~i~~~i~~lnP~  178 (317)
T c1nijA_         160 DVAGEA--EKLHERLARINAR  178 (317)
T ss_dssp             TTCSCT--HHHHHHHHHHCSS
T ss_pred             CCCCHH--HHHHHHHHHHCCC
T ss_conf             668989--9999999740899