Phyre 2 Results for Q47146

Phyre Home | Retrieve Phyre Job Id

Email | l.a.kelley@imperial.ac.uk
Description | Q47146
Date | Thu Jan 5 12:36:21 GMT 2012
Unique Job ID | dacf1d00198aeb7d

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template c2uxwA_
Top template information
PDB header:oxidoreductase Chain: A: PDB Molecule:very-long-chain specific acyl-coa dehydrogenase; PDBTitle: crystal structure of human very long chain acyl-coa2 dehydrogenase (acadvl)
Confidence and coverage
Confidence: | 100.0% | Coverage: | 66%
539 residues ( 66% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | M | I | L | S | I | L | A | T | V | V | L | L | G | A | L | F | Y | H | R | V | S | L | F | I | S | S | L | I | L | L | A | W | T | A | A | L | G | V | A | G | L | W | S | A | W | V | L | V | P | L | A | I | I | L | V | P | F | N | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | A | P | M | R | K | S | M | I | S | A | P | V | F | R | G | F | R | K | V | M | P | P | M | S | R | T | E | K | E | A | I | D | A | G | T | T | W | W | E | G | D | L | F | Q | G | K | P | D | W | K | K | L | H | N | Y | P | Q | P | R | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  | ? | ? | ? |  |  |  | ? |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? |  | ? | ? |  |  | ? | ? |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | T | A | E | E | Q | A | F | L | D | G | P | V | E | E | A | C | R | M | A | N | D | F | Q | I | T | H | E | L | A | D | L | P | P | E | L | W | A | Y | L | K | E | H | R | F | F | A | M | I | I | K | K | E | Y | G | G | L | E | F | S | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | Y | A | Q | S | R | V | L | Q | K | L | S | G | V | S | G | I | L | A | I | T | V | G | V | P | N | S | L | G | P | G | E | L | L | Q | H | Y | G | T | D | E | Q | K | D | H | Y | L | P | R | L | A | R | G | Q | E | I | P | C | F | A | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | T | S | P | E | A | G | S | D | A | G | A | I | P | D | T | G | I | V | C | M | G | E | W | Q | G | Q | Q | V | L | G | M | R | L | T | W | N | K | R | Y | I | T | L | A | P | I | A | T | V | L | G | L | A | F | K | L | S | D | P | E | K
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | L | L | G | G | A | E | D | L | G | I | T | C | A | L | I | P | T | T | T | P | G | V | E | I | G | R | R | H | F | P | L | N | V | P | F | Q | N | G | P | T | R | G | K | D | V | F | V | P | I | D | Y | I | I | G | G | P | K | M | A | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | Q | G | W | R | M | L | V | E | C | L | S | V | G | R | G | I | T | L | P | S | N | S | T | G | G | V | K | S | V | A | L | A | T | G | A | Y | A | H | I | R | R | Q | F | K | I | S | I | G | K | M | E | G | I | E | E | P | L | A | R | I
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480
Sequence |  | A | G | N | A | Y | V | M | D | A | A | A | S | L | I | T | Y | G | I | M | L | G | E | K | P | A | V | L | S | A | I | V | K | Y | H | C | T | H | R | G | Q | Q | S | I | I | D | A | M | D | I | T | G | G | K | G | I | M | L | G | Q | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540
Sequence |  | N | F | L | A | R | A | Y | Q | G | A | P | I | A | I | T | V | E | G | A | N | I | L | T | R | S | M | M | I | F | G | Q | G | A | I | R | C | H | P | Y | V | L | E | E | M | E | A | A | K | N | N | D | V | N | A | F | D | K | L | L | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? |  |  |  | ? |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600
Sequence |  | K | H | I | G | H | V | G | S | N | K | V | R | S | F | W | L | G | L | T | R | G | L | T | S | S | T | P | T | G | D | A | T | K | R | Y | Y | Q | H | L | N | R | L | S | A | N | L | A | L | L | S | D | V | S | M | A | V | L | G | G | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660
Sequence |  | L | K | R | R | E | R | I | S | A | R | L | G | D | I | L | S | Q | L | Y | L | A | S | A | V | L | K | R | Y | D | D | E | G | R | N | E | A | D | L | P | L | V | H | W | G | V | Q | D | A | L | Y | Q | A | E | Q | A | M | D | D | L | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720
Sequence |  | Q | N | F | P | N | R | V | V | A | G | L | L | N | V | V | I | F | P | T | G | R | H | Y | L | A | P | S | D | K | L | D | H | K | V | A | K | I | L | Q | V | P | N | A | T | R | S | R | I | G | R | G | Q | Y | L | T | P | S | E | H | N
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780
Sequence |  | P | V | G | L | L | E | E | A | L | V | D | V | I | A | A | D | P | I | H | Q | R | I | C | K | E | L | G | K | N | L | P | F | T | R | L | D | E | L | A | H | N | A | L | V | K | G | L | I | D | K | D | E | A | A | I | L | V | K | A | E
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | .
Sequence |  | E | S | R | L | R | S | I | N | V | D | D | F | D | P | E | E | L | A | T | K | P | V | K | L | P | E | K | V | R | K | V | E | A | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c2uxwA_ |

### PDB 2uxw chain A

Region: 95 - 676
Aligned: 539
Modelled: 555
Confidence: 100.0%
Identity: 22%
PDB header:oxidoreductase
Chain: A: PDB Molecule:very-long-chain specific acyl-coa dehydrogenase;
PDBTitle: crystal structure of human very long chain acyl-coa2 dehydrogenase (acadvl)

Phyre2
2 |
| c3owaC_ |

### PDB 3owa chain C

Region: 115 - 702
Aligned: 533
Modelled: 551
Confidence: 100.0%
Identity: 20%
PDB header:oxidoreductase
Chain: C: PDB Molecule:acyl-coa dehydrogenase;
PDBTitle: crystal structure of acyl-coa dehydrogenase complexed with fad from2 bacillus anthracis

Phyre2
3 |
| c2z1qA_ |

### PDB 2z1q chain A

Region: 115 - 702
Aligned: 504
Modelled: 519
Confidence: 100.0%
Identity: 26%
PDB header:oxidoreductase
Chain: A: PDB Molecule:acyl-coa dehydrogenase;
PDBTitle: crystal structure of acyl coa dehydrogenase

Phyre2
4 |
| c2ix5A_ |

### PDB 2ix5 chain A

Region: 58 - 513
Aligned: 401
Modelled: 429
Confidence: 100.0%
Identity: 23%
PDB header:oxidoreductase
Chain: A: PDB Molecule:acyl-coenzyme a oxidase 4, peroxisomal;
PDBTitle: short chain specific acyl-coa oxidase from arabidopsis2 thaliana, acx4 in complex with acetoacetyl-coa

Phyre2
5 |
| c1rx0B_ |

### PDB 1rx0 chain B

Region: 116 - 515
Aligned: 374
Modelled: 400
Confidence: 100.0%
Identity: 20%
PDB header:oxidoreductase
Chain: B: PDB Molecule:acyl-coa dehydrogenase family member 8,
PDBTitle: crystal structure of isobutyryl-coa dehydrogenase complexed2 with substrate/ligand.

Phyre2
6 |
| c3sf6A_ |

### PDB 3sf6 chain A

Region: 105 - 515
Aligned: 378
Modelled: 399
Confidence: 100.0%
Identity: 26%
PDB header:oxidoreductase
Chain: A: PDB Molecule:glutaryl-coa dehydrogenase;
PDBTitle: crystal structure of glutaryl-coa dehydrogenase from mycobacterium2 smegmatis

Phyre2
7 |
| c2a1tC_ |

### PDB 2a1t chain C

Region: 119 - 517
Aligned: 377
Modelled: 397
Confidence: 100.0%
Identity: 19%
PDB header:oxidoreductase/electron transport
Chain: C: PDB Molecule:acyl-coa dehydrogenase, medium-chain specific,
PDBTitle: structure of the human mcad:etf e165betaa complex

Phyre2
8 |
| c2vigC_ |

### PDB 2vig chain C

Region: 120 - 522
Aligned: 373
Modelled: 391
Confidence: 100.0%
Identity: 24%
PDB header:oxidoreductase
Chain: C: PDB Molecule:short-chain specific acyl-coa dehydrogenase,;
PDBTitle: crystal structure of human short-chain acyl coa2 dehydrogenase

Phyre2
9 |
| c1siqA_ |

### PDB 1siq chain A

Region: 107 - 514
Aligned: 379
Modelled: 398
Confidence: 100.0%
Identity: 22%
PDB header:oxidoreductase
Chain: A: PDB Molecule:glutaryl-coa dehydrogenase;
PDBTitle: the crystal structure and mechanism of human glutaryl-coa2 dehydrogenase

Phyre2
10 |
| c3oibB_ |

### PDB 3oib chain B

Region: 120 - 507
Aligned: 366
Modelled: 388
Confidence: 100.0%
Identity: 19%
PDB header:oxidoreductase
Chain: B: PDB Molecule:acyl-coa dehydrogenase;
PDBTitle: crystal structure of a putative acyl-coa dehydrogenase from2 mycobacterium smegmatis, iodide soak

Phyre2
11 |
| c2pg0B_ |

### PDB 2pg0 chain B

Region: 120 - 507
Aligned: 368
Modelled: 386
Confidence: 100.0%
Identity: 23%
PDB header:oxidoreductase
Chain: B: PDB Molecule:acyl-coa dehydrogenase;
PDBTitle: crystal structure of acyl-coa dehydrogenase from geobacillus2 kaustophilus

Phyre2
12 |
| c1ivhD_ |

### PDB 1ivh chain D

Region: 116 - 515
Aligned: 379
Modelled: 400
Confidence: 100.0%
Identity: 21%
PDB header:oxidoreductase
Chain: D: PDB Molecule:isovaleryl-coa dehydrogenase;
PDBTitle: structure of human isovaleryl-coa dehydrogenase at 2.62 angstroms resolution: structural basis for substrate3 specificity

Phyre2
13 |
| c2jifA_ |

### PDB 2jif chain A

Region: 116 - 515
Aligned: 375
Modelled: 394
Confidence: 100.0%
Identity: 23%
PDB header:oxidoreductase
Chain: A: PDB Molecule:short/branched chain specific acyl-coa dehydrogenase;
PDBTitle: structure of human short-branched chain acyl-coa2 dehydrogenase (acadsb)

Phyre2
14 |
| c3r7kB_ |

### PDB 3r7k chain B

Region: 116 - 507
Aligned: 370
Modelled: 392
Confidence: 100.0%
Identity: 18%
PDB header:oxidoreductase
Chain: B: PDB Molecule:probable acyl coa dehydrogenase;
PDBTitle: crystal structure of a probable acyl coa dehydrogenase from2 mycobacterium abscessus atcc 19977 / dsm 44196

Phyre2
15 |
| c1egcB_ |

### PDB 1egc chain B

Region: 119 - 517
Aligned: 377
Modelled: 399
Confidence: 100.0%
Identity: 19%
PDB header:electron transfer
Chain: B: PDB Molecule:medium chain acyl-coa dehydrogenase;
PDBTitle: structure of t255e, e376g mutant of human medium chain acyl-2 coa dehydrogenase complexed with octanoyl-coa

Phyre2
16 |
| c2ddhA_ |

### PDB 2ddh chain A

Region: 98 - 662
Aligned: 507
Modelled: 534
Confidence: 100.0%
Identity: 16%
PDB header:oxidoreductase
Chain: A: PDB Molecule:acyl-coa oxidase;
PDBTitle: crystal structure of acyl-coa oxidase complexed with 3-oh-dodecanoate

Phyre2
17 |
| c3swoA_ |

### PDB 3swo chain A

Region: 119 - 515
Aligned: 368
Modelled: 386
Confidence: 100.0%
Identity: 23%
PDB header:oxidoreductase
Chain: A: PDB Molecule:glutaryl-coa dehydrogenase;
PDBTitle: crystal structure of a glutaryl-coa dehydrogenase from mycobacterium2 smegmatis in complex with fadh2

Phyre2
18 |
| c1w07A_ |

### PDB 1w07 chain A

Region: 94 - 662
Aligned: 520
Modelled: 546
Confidence: 100.0%
Identity: 15%
PDB header:oxidoreductase
Chain: A: PDB Molecule:acyl-coa oxidase;
PDBTitle: arabidopsis thaliana acyl-coa oxidase 1

Phyre2
19 |
| c2cx9C_ |

### PDB 2cx9 chain C

Region: 119 - 516
Aligned: 378
Modelled: 383
Confidence: 100.0%
Identity: 25%
PDB header:oxidoreductase
Chain: C: PDB Molecule:acyl-coa dehydrogenase;
PDBTitle: crystal structure of acyl-coa dehydrogenase

Phyre2
20 |
| c3eomD_ |

### PDB 3eom chain D

Region: 107 - 507
Aligned: 365
Modelled: 393
Confidence: 100.0%
Identity: 22%
PDB header:oxidoreductase
Chain: D: PDB Molecule:glutaryl-coa dehydrogenase;
PDBTitle: 2.4 a crystal structure of native glutaryl-coa dehydrogenase from2 burkholderia pseudomallei

Phyre2
21 |
22 |
23 |
24 |
25 |
26 |
27 |
28 |
29 |
30 |
31 |
32 |
33 |
34 |
35 |
36 |
37 |
38 |
39 |
40 |
41 |
42 |
43 |
44 |
45 |
46 |
47 |
48 |
49 |
50 |
51 |
52 |
53 |
54 |
55 |
56 |
57 |
58 |
59 |
60 |
61 |
62 |
63 |
64 |
65 |
66 |
67 |
68 |
69 |
70 |
71 |
| c2jobA_ |

### PDB 2job chain A

Region: 747 - 778
Aligned: 32
Modelled: 32
Confidence: 53.7%
Identity: 22%
PDB header:lipid binding protein
Chain: A: PDB Molecule:antilipopolysaccharide factor;
PDBTitle: solution structure of an antilipopolysaccharide factor from2 shrimp and its possible lipid a binding site

Phyre2
72 |
73 |
74 |
75 |
76 |
77 |
78 |
79 |
80 |
81 |
82 |
83 |
84 |
85 |
86 |
87 |
88 |
89 |
90 |
91 |
92 |
93 |
94 |
95 |
96 |
97 |
98 |
99 |

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2uxwA_ |
|  | 100.0 | 22 | PDB header:oxidoreductase Chain: A: PDB Molecule:very-long-chain specific acyl-coa dehydrogenase; PDBTitle: crystal structure of human very long chain acyl-coa2 dehydrogenase (acadvl)
2 | c3owaC_ |
|  | 100.0 | 20 | PDB header:oxidoreductase Chain: C: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase complexed with fad from2 bacillus anthracis
3 | c2z1qA_ |
|  | 100.0 | 26 | PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl coa dehydrogenase
4 | c2ix5A_ |
|  | 100.0 | 23 | PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coenzyme a oxidase 4, peroxisomal; PDBTitle: short chain specific acyl-coa oxidase from arabidopsis2 thaliana, acx4 in complex with acetoacetyl-coa
5 | c1rx0B_ |
|  | 100.0 | 20 | PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase family member 8, PDBTitle: crystal structure of isobutyryl-coa dehydrogenase complexed2 with substrate/ligand.
6 | c3sf6A_ |
|  | 100.0 | 26 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: crystal structure of glutaryl-coa dehydrogenase from mycobacterium2 smegmatis
7 | c2a1tC_ |
|  | 100.0 | 19 | PDB header:oxidoreductase/electron transport Chain: C: PDB Molecule:acyl-coa dehydrogenase, medium-chain specific, PDBTitle: structure of the human mcad:etf e165betaa complex
8 | c2vigC_ |
|  | 100.0 | 24 | PDB header:oxidoreductase Chain: C: PDB Molecule:short-chain specific acyl-coa dehydrogenase,; PDBTitle: crystal structure of human short-chain acyl coa2 dehydrogenase
9 | c1siqA_ |
|  | 100.0 | 22 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: the crystal structure and mechanism of human glutaryl-coa2 dehydrogenase
10 | c3oibB_ |
|  | 100.0 | 19 | PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of a putative acyl-coa dehydrogenase from2 mycobacterium smegmatis, iodide soak
11 | c2pg0B_ |
|  | 100.0 | 23 | PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase from geobacillus2 kaustophilus
12 | c1ivhD_ |
|  | 100.0 | 21 | PDB header:oxidoreductase Chain: D: PDB Molecule:isovaleryl-coa dehydrogenase; PDBTitle: structure of human isovaleryl-coa dehydrogenase at 2.62 angstroms resolution: structural basis for substrate3 specificity
13 | c2jifA_ |
|  | 100.0 | 23 | PDB header:oxidoreductase Chain: A: PDB Molecule:short/branched chain specific acyl-coa dehydrogenase; PDBTitle: structure of human short-branched chain acyl-coa2 dehydrogenase (acadsb)
14 | c3r7kB_ |
|  | 100.0 | 18 | PDB header:oxidoreductase Chain: B: PDB Molecule:probable acyl coa dehydrogenase; PDBTitle: crystal structure of a probable acyl coa dehydrogenase from2 mycobacterium abscessus atcc 19977 / dsm 44196
15 | c1egcB_ |
|  | 100.0 | 19 | PDB header:electron transfer Chain: B: PDB Molecule:medium chain acyl-coa dehydrogenase; PDBTitle: structure of t255e, e376g mutant of human medium chain acyl-2 coa dehydrogenase complexed with octanoyl-coa
16 | c2ddhA_ |
|  | 100.0 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa oxidase; PDBTitle: crystal structure of acyl-coa oxidase complexed with 3-oh-dodecanoate
17 | c3swoA_ |
|  | 100.0 | 23 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: crystal structure of a glutaryl-coa dehydrogenase from mycobacterium2 smegmatis in complex with fadh2
18 | c1w07A_ |
|  | 100.0 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa oxidase; PDBTitle: arabidopsis thaliana acyl-coa oxidase 1
19 | c2cx9C_ |
|  | 100.0 | 25 | PDB header:oxidoreductase Chain: C: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase
20 | c3eomD_ |
|  | 100.0 | 22 | PDB header:oxidoreductase Chain: D: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: 2.4 a crystal structure of native glutaryl-coa dehydrogenase from2 burkholderia pseudomallei
21 | c1ukwA_ |
| not modelled | 100.0 | 21 | PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of medium-chain acyl-coa dehydrogenase2 from thermus thermophilus hb8
22 | c2dvlB_ |
| not modelled | 100.0 | 26 | PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of project tt0160 from thermus thermophilus hb8
23 | c2fonA_ |
| not modelled | 100.0 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal acyl-coa oxidase 1a; PDBTitle: x-ray crystal structure of leacx1, an acyl-coa oxidase from2 lycopersicon esculentum (tomato)
24 | c3nf4B_ |
| not modelled | 100.0 | 22 | PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase from mycobacterium2 thermoresistibile bound to flavin adenine dinucleotide
25 | c1bucB_ |
| not modelled | 100.0 | 23 | PDB header:oxidoreductase Chain: B: PDB Molecule:butyryl-coa dehydrogenase; PDBTitle: three-dimensional structure of butyryl-coa dehydrogenase from2 megasphaera elsdenii
26 | c3mkhC_ |
| not modelled | 100.0 | 14 | PDB header:oxidoreductase Chain: C: PDB Molecule:nitroalkane oxidase; PDBTitle: podospora anserina nitroalkane oxidase
27 | c1r2jA_ |
| not modelled | 100.0 | 20 | PDB header:oxidoreductase Chain: A: PDB Molecule:protein fkbi; PDBTitle: fkbi for biosynthesis of methoxymalonyl extender unit of2 fk520 polyketide immunosuppresant
28 | c3djlA_ |
| not modelled | 100.0 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:protein aidb; PDBTitle: crystal structure of alkylation response protein e. coli aidb
29 | c2ebaI_ |
| not modelled | 100.0 | 25 | PDB header:oxidoreductase Chain: I: PDB Molecule:putative glutaryl-coa dehydrogenase; PDBTitle: crystal structure of the putative glutaryl-coa dehydrogenase from2 thermus thermophilus
30 | c3mpjG_ |
| not modelled | 100.0 | 24 | PDB header:oxidoreductase Chain: G: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: structure of the glutaryl-coenzyme a dehydrogenase
31 | c3pfdB_ |
| not modelled | 100.0 | 24 | PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of an acyl-coa dehydrogenase from mycobacterium2 thermoresistibile bound to reduced flavin adenine dinucleotide solved3 by combined iodide ion sad mr
32 | c2wbiB_ |
| not modelled | 100.0 | 20 | PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase family member 11; PDBTitle: crystal structure of human acyl-coa dehydrogenase 11
33 | c2rehD_ |
| not modelled | 100.0 | 15 | PDB header:oxidoreductase Chain: D: PDB Molecule:nitroalkane oxidase; PDBTitle: mechanistic and structural analyses of the roles of arg4092 and asp402 in the reaction of the flavoprotein nitroalkane3 oxidase
34 | c3m9vA_ |
| not modelled | 100.0 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:fad-dependent oxidoreductase; PDBTitle: x-ray structure of a kijd3 in complex with dtdp
35 | c2jbtA_ |
| not modelled | 100.0 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:p-hydroxyphenylacetate hydroxylase c2\:oxygenase PDBTitle: structure of the monooxygenase component of p-2 hydroxyphenylacetate hydroxylase from acinetobacter3 baumannii
36 | c2or0B_ |
| not modelled | 100.0 | 11 | PDB header:oxidoreductase Chain: B: PDB Molecule:hydroxylase; PDBTitle: structural genomics, the crystal structure of a putative hydroxylase2 from rhodococcus sp. rha1
37 | c2rfqA_ |
| not modelled | 100.0 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:3-hsa hydroxylase, oxygenase; PDBTitle: crystal structure of 3-hsa hydroxylase from rhodococcus sp. rha1
38 | c3mxlB_ |
| not modelled | 100.0 | 17 | PDB header:oxidoreductase Chain: B: PDB Molecule:nitrososynthase; PDBTitle: crystal structure of nitrososynthase from micromonospora carbonacea2 var. africana
39 | d2ddha3 |
| not modelled | 100.0 | 14 | Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:acyl-CoA oxidase N-terminal domains
40 | c3hwcD_ |
| not modelled | 100.0 | 13 | PDB header:oxidoreductase Chain: D: PDB Molecule:chlorophenol-4-monooxygenase component 2; PDBTitle: crystal structure of chlorophenol 4-monooxygenase (tftd) of2 burkholderia cepacia ac1100
41 | d1w07a3 |
| not modelled | 100.0 | 17 | Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:acyl-CoA oxidase N-terminal domains
42 | d1jqia2 |
| not modelled | 100.0 | 23 | Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
43 | d1rx0a2 |
| not modelled | 100.0 | 21 | Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
44 | d3mdea2 |
| not modelled | 100.0 | 20 | Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
45 | d2c12a2 |
| not modelled | 100.0 | 14 | Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
46 | d1r2ja2 |
| not modelled | 100.0 | 22 | Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
47 | d2d29a2 |
| not modelled | 100.0 | 28 | Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
48 | d1ukwa2 |
| not modelled | 100.0 | 22 | Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
49 | d1egda2 |
| not modelled | 100.0 | 20 | Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
50 | d1buca2 |
| not modelled | 100.0 | 24 | Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
51 | d1ivha2 |
| not modelled | 100.0 | 23 | Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
52 | d1siqa2 |
| not modelled | 100.0 | 22 | Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
53 | c2yyjA_ |
| not modelled | 100.0 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxyphenylacetate-3-hydroxylase; PDBTitle: crystal structure of the oxygenase component (hpab) of 4-2 hydroxyphenylacetate 3-monooxygenase complexed with fad and 4-3 hydroxyphenylacetate
54 | c1u8vA_ |
| not modelled | 100.0 | 17 | PDB header:lyase, isomerase Chain: A: PDB Molecule:gamma-aminobutyrate metabolism PDBTitle: crystal structure of 4-hydroxybutyryl-coa dehydratase from2 clostridium aminobutyricum: radical catalysis involving a3 [4fe-4s] cluster and flavin
55 | d1siqa1 |
| not modelled | 99.9 | 17 | Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain
56 | d1rx0a1 |
| not modelled | 99.9 | 20 | Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain
57 | d1egda1 |
| not modelled | 99.9 | 18 | Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain
58 | d3mdea1 |
| not modelled | 99.9 | 20 | Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain
59 | d1ivha1 |
| not modelled | 99.9 | 20 | Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain
60 | d1jqia1 |
| not modelled | 99.9 | 22 | Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain
61 | d1buca1 |
| not modelled | 99.9 | 23 | Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain
62 | d1ukwa1 |
| not modelled | 99.9 | 20 | Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain
63 | d2ddha1 |
| not modelled | 99.9 | 20 | Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:acyl-CoA oxidase C-terminal domains
64 | d1w07a1 |
| not modelled | 99.9 | 16 | Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:acyl-CoA oxidase C-terminal domains
65 | d2d29a1 |
| not modelled | 99.9 | 20 | Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain
66 | d2c12a1 |
| not modelled | 99.9 | 15 | Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain
67 | d1r2ja1 |
| not modelled | 99.9 | 19 | Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain
68 | d1u8va2 |
| not modelled | 99.8 | 15 | Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
69 | d1k8ke_ |
| not modelled | 87.9 | 20 | Fold:Arp2/3 complex 21 kDa subunit ARPC3 Superfamily:Arp2/3 complex 21 kDa subunit ARPC3 Family:Arp2/3 complex 21 kDa subunit ARPC3
70 | d1u8va1 |
| not modelled | 76.0 | 17 | Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain
71 | c2jobA_ |
|  | 53.7 | 22 | PDB header:lipid binding protein Chain: A: PDB Molecule:antilipopolysaccharide factor; PDBTitle: solution structure of an antilipopolysaccharide factor from2 shrimp and its possible lipid a binding site
72 | c2r7bA_ |
| not modelled | 43.3 | 12 | PDB header:signaling protein, transferase Chain: A: PDB Molecule:phosphoinositide-dependent protein kinase 1; PDBTitle: crystal structure of the phosphoinositide-dependent kinase-2 1 (pdk-1)catalytic domain bound to a dibenzonaphthyridine3 inhibitor
73 | c2vywA_ |
| not modelled | 41.8 | 10 | PDB header:oxygen binding Chain: A: PDB Molecule:hemoglobin; PDBTitle: hemoglobin (hb2) from trematode fasciola hepatica
74 | d1pbya2 |
| not modelled | 34.7 | 24 | Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2
75 | d2lhba_ |
| not modelled | 32.4 | 21 | Fold:Globin-like Superfamily:Globin-like Family:Globins
76 | d1dgna_ |
| not modelled | 31.2 | 12 | Fold:DEATH domain Superfamily:DEATH domain Family:Caspase recruitment domain, CARD
77 | c3exmA_ |
| not modelled | 30.9 | 22 | PDB header:hydrolase Chain: A: PDB Molecule:phosphatase sc4828; PDBTitle: crystal structure of the phosphatase sc4828 with the non-hydrolyzable2 nucleotide gpcp
78 | d1khba1 |
| not modelled | 30.1 | 18 | Fold:PEP carboxykinase-like Superfamily:PEP carboxykinase-like Family:PEP carboxykinase C-terminal domain
79 | d2p12a1 |
| not modelled | 29.2 | 16 | Fold:FomD barrel-like Superfamily:FomD-like Family:FomD-like
80 | d2cb5a_ |
| not modelled | 29.1 | 19 | Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Papain-like
81 | d1h16a_ |
| not modelled | 29.0 | 15 | Fold:PFL-like glycyl radical enzymes Superfamily:PFL-like glycyl radical enzymes Family:PFL-like
82 | d2hgsa4 |
| not modelled | 28.7 | 31 | Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:Eukaryotic glutathione synthetase ATP-binding domain
83 | d2duca1 |
| not modelled | 26.8 | 14 | Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral cysteine protease of trypsin fold
84 | c2hgsA_ |
| not modelled | 26.1 | 31 | PDB header:amine/carboxylate ligase Chain: A: PDB Molecule:protein (glutathione synthetase); PDBTitle: human glutathione synthetase
85 | c3ebnD_ |
| not modelled | 25.2 | 14 | PDB header:hydrolase Chain: D: PDB Molecule:replicase polyprotein 1ab; PDBTitle: a special dimerization of sars-cov main protease c-terminal2 domain due to domain-swapping
86 | c3h0dB_ |
| not modelled | 24.5 | 10 | PDB header:transcription/dna Chain: B: PDB Molecule:ctsr; PDBTitle: crystal structure of ctsr in complex with a 26bp dna duplex
87 | c3hf3A_ |
| not modelled | 22.2 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:chromate reductase; PDBTitle: old yellow enzyme from thermus scotoductus sa-01
88 | d1cqxa1 |
| not modelled | 21.3 | 22 | Fold:Globin-like Superfamily:Globin-like Family:Globins
89 | d2io8a3 |
| not modelled | 21.0 | 21 | Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:Glutathionylspermidine synthase ATP-binding domain-like
90 | c1pbyA_ |
| not modelled | 20.9 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:quinohemoprotein amine dehydrogenase 60 kda PDBTitle: structure of the phenylhydrazine adduct of the2 quinohemoprotein amine dehydrogenase from paracoccus3 denitrificans at 1.7 a resolution
91 | d1hbga_ |
| not modelled | 20.8 | 12 | Fold:Globin-like Superfamily:Globin-like Family:Globins
92 | c1ylmA_ |
| not modelled | 20.6 | 11 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein bsu32300; PDBTitle: structure of cytosolic protein of unknown function yute2 from bacillus subtilis
93 | d1oyaa_ |
| not modelled | 20.2 | 18 | Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases
94 | d1uu3a_ |
| not modelled | 19.7 | 12 | Fold:Protein kinase-like (PK-like) Superfamily:Protein kinase-like (PK-like) Family:Protein kinases, catalytic subunit
95 | c2q6fB_ |
| not modelled | 19.7 | 17 | PDB header:hydrolase Chain: B: PDB Molecule:infectious bronchitis virus (ibv) main protease; PDBTitle: crystal structure of infectious bronchitis virus (ibv) main2 protease in complex with a michael acceptor inhibitor n3
96 | c2zs0A_ |
| not modelled | 19.0 | 14 | PDB header:oxygen storage, oxygen transport Chain: A: PDB Molecule:extracellular giant hemoglobin major globin subunit a1; PDBTitle: structural basis for the heterotropic and homotropic interactions of2 invertebrate giant hemoglobin
97 | d1djqa1 |
| not modelled | 18.3 | 17 | Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases
98 | c2hbpA_ |
| not modelled | 18.1 | 14 | PDB header:endocytosis, protein binding Chain: A: PDB Molecule:cytoskeleton assembly control protein sla1; PDBTitle: solution structure of sla1 homology domain 1
99 | c3dxrA_ |
| not modelled | 18.1 | 21 | PDB header:protein transport Chain: A: PDB Molecule:mitochondrial import inner membrane translocase PDBTitle: crystal structure of the yeast inter-membrane space2 chaperone assembly tim9.10

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0