Phyre 2 alignment of Q47146 with d1pbya2

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Job Description | Q47146
Confidence | 34.69% | Date | Thu Jan 5 12:36:21 GMT 2012
Rank | 74 | Aligned Residues | 45
% Identity | 24% | Template | d1pbya2
SCOP info | Cytochrome c | Cytochrome c | Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2
Resolution | 1.70

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 493 | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | I | T | V | E | G | A | N | I | L | T | R | S | M | M | I | F | G | Q | G | A | I | R | C | H | P | Y | V | L | E | E | M | E | A | A | K | N | N | D | V | N | A | F | D | K | L | L | F | K | H | I | G | H | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | A | W | D | E | G | P | D | T | S | M | T | . | . | . | . | . | . | Q | T | C | G | R | C | H | S | Y | A | R | . | . | . | V | A | L | Q | R | R | T | P | E | D | W | K | H | L | V | N | F | H | L | G | Q | F
Template Known Secondary structure |  |  |  |  |  |  |  | S | S |  |  |  |  | . | . | . | . | . | . |  |  |  | S | S | S | S |  | T |  |  | . | . | . |  |  | T |  |  | B |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 86 | . | . | . | 90 | . | . | . | . | . | . | . |  |  |  |  |  |  | . | . | 100 | . | . | . | . | . | . | . | . |  |  |  | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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