11/01/2012 01:50:22 : INFO  : Run start: Wed Jan 11 01:50:21 GMT 2012
11/01/2012 01:50:24 : INFO  : Initialised job
11/01/2012 01:50:25 : INFO  : Renaming log file 'phyre2_20120111_015021.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/dacf1d00198aeb7d/phyre_20120111_015021.log'
11/01/2012 01:50:26 : INFO  : Initialised job:
Sequence
>batch____
MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWSAWVLVPLAIILVPFNF
APMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGKPDWKKLHNYPQPRL
TAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLEFSA
YAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKDHYLPRLARGQEIPCFAL
TSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEK
LLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTRGKDVFVPIDYIIGGPKMAG
QGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISIGKMEGIEEPLARI
AGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQS
NFLARAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLF
KHIGHVGSNKVRSFWLGLTRGLTSSTPTGDATKRYYQHLNRLSANLALLSDVSMAVLGGS
LKRRERISARLGDILSQLYLASAVLKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLL
QNFPNRVVAGLLNVVIFPTGRHYLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHN
PVGLLEEALVDVIAADPIHQRICKELGKNLPFTRLDELAHNALVKGLIDKDEAAILVKAE
ESRLRSINVDDFDPEELATKPVKLPEKVRKVEAA

11/01/2012 01:50:26 : INFO  : Checked sequence
11/01/2012 01:50:28 : INFO  : Finding homologues with PSI-BLAST
11/01/2012 01:50:28 : INFO  : PSI-BLAST 3 iterations
11/01/2012 01:53:58 : INFO  : PSI-BLAST 5 iterations
11/01/2012 01:58:52 : INFO  : Finished PSI-BLAST
11/01/2012 01:58:54 : INFO  : Running Buildali to generate a3m file
11/01/2012 02:17:07 : INFO  : Converting to HMM
11/01/2012 02:17:17 : INFO  : Calibrating HMM
11/01/2012 02:17:48 : INFO  : Searching HMM database
11/01/2012 02:35:55 : INFO  : Finished buildali
11/01/2012 02:35:56 : INFO  : Predicting secondary structure
11/01/2012 02:35:59 : INFO  : Predicted secondary structure (PSI-Pred)
11/01/2012 02:36:00 : INFO  : Predicting Disordered regions
11/01/2012 02:36:02 : INFO  : Predicted Disorder (Disopred)
11/01/2012 02:36:02 : INFO  : Running memsat_svm check
11/01/2012 02:39:45 : INFO  : Running memsat_svm full
11/01/2012 02:45:25 : INFO  : Predicted Transmembrane (memsat_svm) ID 'dacf1d00198aeb7d'
11/01/2012 02:45:25 : INFO  : Initialising fold library search
11/01/2012 02:45:27 : INFO  : Initialised search input
11/01/2012 02:45:28 : INFO  : Building Ensemble models
11/01/2012 02:45:29 : INFO  : Building hh.c2uxwA_.model.1.pdb
11/01/2012 02:45:35 : INFO  : Building hh.c3owaC_.model.2.pdb
11/01/2012 02:45:40 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/dacf1d00198aeb7d/hh.c3owaC_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/dacf1d00198aeb7d/c3owaC_.2.pdb
11/01/2012 02:45:42 : INFO  : Building hh.c2z1qA_.model.3.pdb
11/01/2012 02:45:48 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/dacf1d00198aeb7d/hh.c2z1qA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/dacf1d00198aeb7d/c2z1qA_.3.pdb
11/01/2012 02:45:50 : INFO  : Building hh.c2jobA_.model.4.pdb
11/01/2012 02:45:55 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/dacf1d00198aeb7d/hh.c2jobA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/dacf1d00198aeb7d/c2jobA_.71.pdb
11/01/2012 02:45:56 : INFO  : Building c2uxwA_.1.pdb
11/01/2012 02:46:06 : INFO  : Building c3owaC_.2.pdb
11/01/2012 02:46:16 : INFO  : Building c2z1qA_.3.pdb
11/01/2012 02:46:24 : INFO  : Building c2ix5A_.4.pdb
11/01/2012 02:46:31 : INFO  : Building c1rx0B_.5.pdb
11/01/2012 02:46:40 : INFO  : Building c3sf6A_.6.pdb
11/01/2012 02:46:50 : INFO  : Building c2a1tC_.7.pdb
11/01/2012 02:46:55 : INFO  : Building c2vigC_.8.pdb
11/01/2012 02:47:00 : INFO  : Building c1siqA_.9.pdb
11/01/2012 02:47:05 : INFO  : Building c3oibB_.10.pdb
11/01/2012 02:47:10 : INFO  : Building c2pg0B_.11.pdb
11/01/2012 02:47:16 : INFO  : Building c1ivhD_.12.pdb
11/01/2012 02:47:21 : INFO  : Building c2jifA_.13.pdb
11/01/2012 02:47:26 : INFO  : Building c3r7kB_.14.pdb
11/01/2012 02:47:32 : INFO  : Building c1egcB_.15.pdb
11/01/2012 02:47:36 : INFO  : Building c2ddhA_.16.pdb
11/01/2012 02:47:41 : INFO  : Building c3swoA_.17.pdb
11/01/2012 02:47:45 : INFO  : Building c1w07A_.18.pdb
11/01/2012 02:47:50 : INFO  : Building c2cx9C_.19.pdb
11/01/2012 02:47:54 : INFO  : Building c3eomD_.20.pdb
11/01/2012 02:48:31 : INFO  : Finished HH model building
11/01/2012 02:48:31 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
11/01/2012 02:49:13 : INFO  : html domain output complete ID 'dacf1d00198aeb7d'
11/01/2012 07:51:16 : INFO  : Run end  : Wed Jan 11 07:51:16 GMT 2012
