Phyre 2 alignment of Q47146 with d1djqa1

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Job Description | Q47146
Confidence | 18.34% | Date | Thu Jan 5 12:36:21 GMT 2012
Rank | 97 | Aligned Residues | 29
% Identity | 17% | Template | d1djqa1
SCOP info | TIM beta/alpha-barrel | FMN-linked oxidoreductases | FMN-linked oxidoreductases
Resolution | 2.20

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 453 | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | H | C | T | H | R | G | Q | Q | S | I | I | D | A | M | D | I | T | G | G | K | G | I | M | L | G | Q | S | N | F | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |
Template Sequence |  | V | D | A | A | K | R | S | R | D | A | G | F | D | I | V | Y | V | Y | G | A | H | S | Y | L | P | . | . | L | Q | F | L
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T |  | S |  |  |  |  |  |  |  | T | T |  |  |  | . | . |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |  |  | . | . | . | 180

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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