15 c1pjrA_ Probab=99.04   E-value=1.4e-09  Score=78.50  Aligned_columns=150  Identities=20%

Q ss_pred             CHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCC--CEEEEECCCHHHHHHC------------------
Q ss_conf             99999999985058818997278876379999999999970996--3899972682786531------------------
Q batch____       122 TPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEI--RRILLTRPAVEAGEKL------------------  181 (346)
Q Consensus       122 t~~Q~~~i~al~~~~iv~~~GpAGTGKT~la~a~a~~~l~~~~~--~rIil~RP~v~ag~~l------------------  181 (346)
                      |..|+.++.+  .+..+++.||||||||++.+.....++.++..  .+|+++.|+..|...+                  
T Consensus        13 ~~~Q~~ai~~--~~~~~lV~GppGTGKT~~l~~~i~~ll~~~~~~~~~ILv~s~tn~A~d~~~~ri~~~~~~~~~~~~i~   90 (623)
T c1pjrA_          13 NKEQQEAVRT--TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGGAAEDVWIS   90 (623)
T ss_dssp             CHHHHHHHHC--CSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHHHHGGGGTTSEEE
T ss_pred             CHHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf             8898999958--89978999488986779999999999980899977878974698999999999999610110276897


Q ss_pred             ---------------------------------------------------------------------CCCCCCHHHHH
Q ss_conf             ---------------------------------------------------------------------21368878978
Q batch____       182 ---------------------------------------------------------------------GFLPGDLSQKV  192 (346)
Q Consensus       182 ---------------------------------------------------------------------GfLPGd~~eK~  192 (346)
                                                                                           -+..-...+.+
T Consensus        91 T~~sf~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  170 (623)
T c1pjrA_          91 TFHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPEQFAKRYYEKVV  170 (623)
T ss_dssp             EHHHHHHHHHHHHGGGGTCCTTCEECCHHHHHHHHHHHHHTTSCTTTTCCHHHHHHHHHHHHHTTCCHHHHTTCCHHHHH
T ss_pred             EHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             52799999998728874989897277989999999999986398900078899999999997518997896310268999


Q ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCH
Q ss_conf             88899899999986297889999846977995010105874477689996602499999999998619997699977803
Q batch____       193 DPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVT  272 (346)
Q Consensus       193 ~pyl~pl~d~L~~~~~~~~~~~~~~~~~iei~pl~ymRGRtl~~~~iIiDEAQn~t~~~mk~~LTR~g~~skiVi~GD~~  272 (346)
                      ..+.......+...-.............+-...-...........++.+||+|.+++.+...+..-......+.++||+.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~  250 (623)
T c1pjrA_         171 SDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVPDVLHYYQYKFQYIHIDEYQDTNRAQYTLVKKLAERFQNICAVGDAD  250 (623)
T ss_dssp             HHHHHHHHHHHHHTTEECTTHHHHHHHHHHHHCHHHHHHHHHHCSEEEESSGGGCCHHHHHHHHHHHTTTCCEEEEECGG
T ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             99999999998856987601489999999415989998500248715421122299899999998715698599982244


Q ss_pred             H
Q ss_conf             5
Q batch____       273 Q  273 (346)
Q Consensus       273 Q  273 (346)
                      |
T Consensus       251 q  251 (623)
T c1pjrA_         251 Q  251 (623)
T ss_dssp             G
T ss_pred             C
T ss_conf             2


