10 d1pjra1 Probab=99.42   E-value=1.8e-12  Score=96.23  Aligned_columns=185  Identities=17%

Q ss_pred             CEECCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHC--CCCEEEEECCCHHHHHHCCCC-----------
Q ss_conf             0015999999999850588189972788763799999999999709--963899972682786531213-----------
Q batch____       118 IKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQ--EIRRILLTRPAVEAGEKLGFL-----------  184 (346)
Q Consensus       118 i~p~t~~Q~~~i~al~~~~iv~~~GpAGTGKT~la~a~a~~~l~~~--~~~rIil~RP~v~ag~~lGfL-----------  184 (346)
                      +...|++|+.+++.  .+..+++.||||||||++++..+..++.++  ...+|+++.|+..+...+-..           
T Consensus         9 ~~~L~~~Q~~~I~~--~~~~~lI~G~pGTGKT~~l~~~i~~ll~~~~~~~~~iL~lt~s~~a~~~~~~r~~~~~~~~~~~   86 (315)
T d1pjra1           9 LAHLNKEQQEAVRT--TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGGAAED   86 (315)
T ss_dssp             HTTSCHHHHHHHHC--CSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHHHHGGGGTT
T ss_pred             HHHCCHHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEECCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf             84128999999966--8997899838998787999999999998089997677787169899998988788751133466


Q ss_pred             ----------------------------------------------------------------------------CCCH
Q ss_conf             ----------------------------------------------------------------------------6887
Q batch____       185 ----------------------------------------------------------------------------PGDL  188 (346)
Q Consensus       185 ----------------------------------------------------------------------------PGd~  188 (346)
                                                                                                  ....
T Consensus        87 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (315)
T d1pjra1          87 VWISTFHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPEQFAKRYY  166 (315)
T ss_dssp             SEEEEHHHHHHHHHHHHGGGGTCCTTCEECCHHHHHHHHHHHHHTTSCTTTTCCHHHHHHHHHHHHHTTCCHHHHTTCCH
T ss_pred             CEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf             30212999999997764786187666432695899999999987427772226789999999999861279667555454


Q ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEE
Q ss_conf             89788889989999998629788999984697799501010587447768999660249999999999861999769997
Q batch____       189 SQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVIT  268 (346)
Q Consensus       189 ~eK~~pyl~pl~d~L~~~~~~~~~~~~~~~~~iei~pl~ymRGRtl~~~~iIiDEAQn~t~~~mk~~LTR~g~~skiVi~  268 (346)
                      ......+..-......................+-.......+.......+|++||+|.+++.++..+..-...+.+++++
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vDe~Qd~~~~q~~ll~~l~~~~~~l~l~  246 (315)
T d1pjra1         167 EKVVSDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVPDVLHYYQYKFQYIHIDEYQDTNRAQYTLVKKLAERFQNICAV  246 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECTTHHHHHHHHHHHHCHHHHHHHHHHCSEEEESSGGGCCHHHHHHHHHHHTTTCCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCCHHHHHHHHHHHCCCCEEEEE
T ss_conf             43333211235677653045663689999999963289999851024835620135409989999999972469869998


Q ss_pred             CCCHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf             7803513888877708999999648997169980523
Q batch____       269 GDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSE  305 (346)
Q Consensus       269 GD~~QiDlp~~~~sGL~~a~~~l~~~~~i~~i~~~~~  305 (346)
                      ||+.|. .+....+......+..+..++...+.++.+
T Consensus       247 GD~~Q~-i~~~~~~~~~~~~~l~~~~~~~~~~~L~~n  282 (315)
T d1pjra1         247 GDADQS-IYRWRGADIQNILSFERDYPNAKVILLEQN  282 (315)
T ss_dssp             ECGGGC-CCGGGTCCTHHHHTHHHHSTTCEEEEECBC
T ss_pred             ECCCCC-CHHHCCCCHHHHHHHHHHCCCCEEEEECCC
T ss_conf             033318-200049998999999984489669996865