26 d1gkub1 Probab=98.41   E-value=4.7e-06  Score=56.96  Aligned_columns=119  Identities=19%

Q ss_pred             CHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             99999999985058818997278876379999999999970996389997268278653121368878978888998999
Q batch____       122 TPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYD  201 (346)
Q Consensus       122 t~~Q~~~i~al~~~~iv~~~GpAGTGKT~la~a~a~~~l~~~~~~rIil~RP~v~ag~~lGfLPGd~~eK~~pyl~pl~d  201 (346)
                      ++.|+..++.+++..-+++++|.|+|||..++..++....++  .|+++.-|+....                  ..+++
T Consensus        45 ~~~Q~~~~~~~l~g~~~~i~apTG~GKT~~~~~~~~~~~~~~--~~~lii~Pt~aL~------------------~q~~~  104 (237)
T d1gkub1          45 RAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLALKG--KRCYVIFPTSLLV------------------IQAAE  104 (237)
T ss_dssp             CHHHHHHHHHHHTTCCEECCCCTTSCSHHHHHHHHHHHHTTS--CCEEEEESCHHHH------------------HHHHH
T ss_pred             CHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC--CCEEEEECHHHHH------------------HHHHH
T ss_conf             889999999996799789992599886799999999999626--9869993218999------------------99999


Q ss_pred             HHHHHCC----------------------HHHHHHHHHCCCEEEECCHHCCCCCC--CCCEEEEECCCCC--CHHHHHHH
Q ss_conf             9998629----------------------78899998469779950101058744--7768999660249--99999999
Q batch____       202 ALFEMLG----------------------FEKVEKLIERNVIEVAPLAYMRGRTL--NDAFIILDESQNT--TIEQMKMF  255 (346)
Q Consensus       202 ~L~~~~~----------------------~~~~~~~~~~~~iei~pl~ymRGRtl--~~~~iIiDEAQn~--t~~~mk~~  255 (346)
                      .+..+..                      ............+...+....+....  +-.+||+||+..+  +......+
T Consensus       105 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~t~~~~~~~~~~~~~~~~viiDE~h~l~~~~~~~~~~  184 (237)
T d1gkub1         105 TIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFKIVITTTQFLSKHYRELGHFDFIFVDDVDAILKASKNVDKL  184 (237)
T ss_dssp             HHHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGGGCSEEEEEHHHHHHCSTTSCCCSEEEESCHHHHHTSTHHHHHH
T ss_pred             HHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCHHHH
T ss_conf             99999876698402322222047851356765301465420022188866544320476779944655750111214789


Q ss_pred             HHHCC
Q ss_conf             98619
Q batch____       256 LTRIG  260 (346)
Q Consensus       256 LTR~g  260 (346)
                      +..+|
T Consensus       185 l~~lg  189 (237)
T d1gkub1         185 LHLLG  189 (237)
T ss_dssp             HHHTT
T ss_pred             HHHHC
T ss_conf             98716