35 c3ly5A_ Probab=98.28   E-value=0.00022  Score=46.77  Aligned_columns=134  Identities=22%

Q ss_pred             CCEECCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCC-----EEEEECCCHHHHHHCCCCCCCHHHH
Q ss_conf             10015999999999850588189972788763799999999999709963-----8999726827865312136887897
Q batch____       117 VIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIR-----RILLTRPAVEAGEKLGFLPGDLSQK  191 (346)
Q Consensus       117 ~i~p~t~~Q~~~i~al~~~~iv~~~GpAGTGKT~la~a~a~~~l~~~~~~-----rIil~RP~v~ag~~lGfLPGd~~eK  191 (346)
                      ++.--++-|..++..+++..=+++.+|+|+|||+..+..+++.+......     +.++..|+.+.+             
T Consensus        23 g~~~~~~~Q~~ai~~ll~g~~viv~a~tgsGKT~~~~l~~l~~l~~~~~~~~~~~~~iii~P~~~L~-------------   89 (211)
T c3ly5A_          23 GFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELA-------------   89 (211)
T ss_dssp             TCCBCCHHHHHHHHHHHHTCCCEECCCTTSCHHHHHHHHHHHHHHHTTCCGGGCCCEEEECSSHHHH-------------
T ss_pred             CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH-------------
T ss_conf             8998898999999999679979999779972258999999999973000013587427971530328-------------


Q ss_pred             HHHHHHHHHHHHHHHCC---------------HHHHHHHHHCCCEEEECCHHC--------CCCCCCCCEEEEECC----
Q ss_conf             88889989999998629---------------788999984697799501010--------587447768999660----
Q batch____       192 VDPYLRPLYDALFEMLG---------------FEKVEKLIERNVIEVAPLAYM--------RGRTLNDAFIILDES----  244 (346)
Q Consensus       192 ~~pyl~pl~d~L~~~~~---------------~~~~~~~~~~~~iei~pl~ym--------RGRtl~~~~iIiDEA----  244 (346)
                           .-+++.+..+..               .+..........+-+.....+        .-..-+-.++|+||+    
T Consensus        90 -----~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~tp~~l~~~l~~~~~~~~~~l~~iViDE~~~l~  164 (211)
T c3ly5A_          90 -----MQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRIL  164 (211)
T ss_dssp             -----HHHHHHHHHHTTTCCSCEEEECSSSCHHHHHHHHHHCCSEEEECHHHHHHHHHHCTTCCCTTCCEEEECSHHHHH
T ss_pred             -----HHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHC
T ss_conf             -----999999999864539606888733771588884027882798466899999961253200542189973058832


Q ss_pred             CCCCHHHHHHHHHHCCCCCEEEEE
Q ss_conf             249999999999861999769997
Q batch____       245 QNTTIEQMKMFLTRIGFNSKAVIT  268 (346)
Q Consensus       245 Qn~t~~~mk~~LTR~g~~skiVi~  268 (346)
                      ++---++++.++.++..+.++|++
T Consensus       165 ~~~~~~~~~~i~~~l~~~~q~v~~  188 (211)
T c3ly5A_         165 DVGFEEELKQIIKLLPTRRQTMLF  188 (211)
T ss_dssp             HTTCHHHHHHHHHHSCSSSEEEEE
T ss_pred             CCCHHHHHHHHHHHCCCCCCEEEE
T ss_conf             458699999999975999979999