41 c3dkpA_ Probab=98.22   E-value=0.00011  Score=48.47  Aligned_columns=127  Identities=20%

Q ss_pred             CCEECCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCC--EEEEECCCHHHHHHCCCCCCCHHHHHHH
Q ss_conf             10015999999999850588189972788763799999999999709963--8999726827865312136887897888
Q batch____       117 VIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIR--RILLTRPAVEAGEKLGFLPGDLSQKVDP  194 (346)
Q Consensus       117 ~i~p~t~~Q~~~i~al~~~~iv~~~GpAGTGKT~la~a~a~~~l~~~~~~--rIil~RP~v~ag~~lGfLPGd~~eK~~p  194 (346)
                      ++.--++-|+.++..+++..=+++..|.|||||+..+..+++.+......  ++++..|+.+.+..              
T Consensus        48 g~~~p~~iQ~~ai~~il~g~dvii~apTGsGKTl~~~lp~l~~~~~~~~~~~~~lii~Pt~~l~~q--------------  113 (240)
T c3dkpA_          48 GFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQ--------------  113 (240)
T ss_dssp             TCCSCCHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHCSCCSSSCCEEEECSSHHHHHH--------------
T ss_pred             CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHH--------------
T ss_conf             898789899999899738997999952899713788999998720444358426886464124478--------------


Q ss_pred             HHHHHHHHHHHHCC---------------------------------HHHHHHHHHCCCEEEECCHHCCCCCCCCCEEEE
Q ss_conf             89989999998629---------------------------------788999984697799501010587447768999
Q batch____       195 YLRPLYDALFEMLG---------------------------------FEKVEKLIERNVIEVAPLAYMRGRTLNDAFIIL  241 (346)
Q Consensus       195 yl~pl~d~L~~~~~---------------------------------~~~~~~~~~~~~iei~pl~ymRGRtl~~~~iIi  241 (346)
                          .++.+..+..                                 ++.+..++.++        ..+...-+-.++|+
T Consensus       114 ----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ili~Tp~~l~~~l~~~--------~~~~~~~~i~~iVi  181 (240)
T c3dkpA_         114 ----IHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQD--------PPGIDLASVEWLVV  181 (240)
T ss_dssp             ----HHHHHHHHTTTSCCCEECCCHHHHHHTTTSTTSCCCCCEEEECHHHHHHHHHSS--------SCSCCCTTCCEEEE
T ss_pred             ----HHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEECHHHHHHHHHCC--------CCCHHCCCCCEEEE
T ss_conf             ----999999731426861699996587379998652058863122748999998658--------40010266747984


Q ss_pred             ECCCCCCH-----HHHHHHHHHC-CCCCEEEEEC
Q ss_conf             66024999-----9999999861-9997699977
Q batch____       242 DESQNTTI-----EQMKMFLTRI-GFNSKAVITG  269 (346)
Q Consensus       242 DEAQn~t~-----~~mk~~LTR~-g~~skiVi~G  269 (346)
                      |||..+..     .+++.++.++ ..+.++|+++
T Consensus       182 DEad~l~~~~~~~~~l~~il~~~~~~~~q~i~~S  215 (240)
T c3dkpA_         182 DESDKLFEDGGFRDQLASIFLACTSHKVRRAMFS  215 (240)
T ss_dssp             SSHHHHHHHCCHHHHHHHHHHHCCCTTCEEEEEE
T ss_pred             ECHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             2367752025869999999984388898299998