12 c2pjrF_ Probab=99.37   E-value=2.3e-11  Score=89.52  Aligned_columns=165  Identities=18%

Q ss_pred             CHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHC--CCCEEEEECCCHHH----------------------
Q ss_conf             999999999850588189972788763799999999999709--96389997268278----------------------
Q batch____       122 TPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQ--EIRRILLTRPAVEA----------------------  177 (346)
Q Consensus       122 t~~Q~~~i~al~~~~iv~~~GpAGTGKT~la~a~a~~~l~~~--~~~rIil~RP~v~a----------------------  177 (346)
                      |..|+.++.+.  +..+.+.||||||||++.+..+..++.++  ...+|+++.++..|                      
T Consensus        10 ~~~Q~~av~~~--~~~~lI~g~aGsGKT~~l~~~~~~ll~~~~~~~~~iL~~t~t~~A~~~l~~rl~~~l~~~~~~~~i~   87 (544)
T c2pjrF_          10 NKEQQEAVRTT--EGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGGAAEDVWIS   87 (544)
T ss_dssp             CHHHHHHHHCC--SSCEEEEECTTSCHHHHHHHTHHHHTTTSCCCGGGEEEEESCHHHHTHHHHHHTTTSCTTSTTSEEE
T ss_pred             CHHHHHHHHCC--CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf             88999999578--9988998389986779999999999982899977777975698999999999999620002166897


Q ss_pred             -------------HHHCCCCCCC---------------------------------------------------------
Q ss_conf             -------------6531213688---------------------------------------------------------
Q batch____       178 -------------GEKLGFLPGD---------------------------------------------------------  187 (346)
Q Consensus       178 -------------g~~lGfLPGd---------------------------------------------------------  187 (346)
                                   +..+|+-|..                                                         
T Consensus        88 T~h~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~k~~~~~~~~~~~~~~~~~~  167 (544)
T c2pjrF_          88 TFHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPEQFAKRASTYYE  167 (544)
T ss_dssp             EHHHHHHHHHHHHGGGGTCCTTCEECCHHHHHHHHHHHHTTSCCSSSSSCHHHHHHHHHHHHTTTCCHHHHHHSCCSSHH
T ss_pred             EHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             52799999999848874989788065888999999999986298802179899999999998426896675552002233


Q ss_pred             --------------HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCHHCCCCCCCCCEEEEECCCCCCHHHHH
Q ss_conf             --------------789788889989999998629788999984697799501010587447768999660249999999
Q batch____       188 --------------LSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMK  253 (346)
Q Consensus       188 --------------~~eK~~pyl~pl~d~L~~~~~~~~~~~~~~~~~iei~pl~ymRGRtl~~~~iIiDEAQn~t~~~mk  253 (346)
                                    ..++..-|-.-+..+...+.....+...+...                ..+|+|||+|.+++.|..
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~~----------------~~~v~iDe~qd~~~~q~~  231 (544)
T c2pjrF_         168 KVVSDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVPDVLHYYQYK----------------FQYIHIDEYQDTNRAQYT  231 (544)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECHHHHHHHHHHHHHHSHHHHHHHHHH----------------CSEEEESCGGGCBHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCC----------------CCEEEECCHHHCCHHHHH
T ss_conf             6899999999999887689896899999999960498999974203----------------988995355439989999


Q ss_pred             HHHHHCCCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf             9998619997699977803513888877708999999648997169980523
Q batch____       254 MFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSE  305 (346)
Q Consensus       254 ~~LTR~g~~skiVi~GD~~QiDlp~~~~sGL~~a~~~l~~~~~i~~i~~~~~  305 (346)
                      .+..-.+.+.+++++||+.|. .+....+-.......-+..++...+.++.+
T Consensus       232 il~~L~~~~~~l~~vGD~~Q~-i~~~~g~~~~~~~~~~~~~~~~~~~~L~~~  282 (544)
T c2pjrF_         232 LVKKLAERFQNICAVGDADQS-IYRWRGADIQNILSFERDYPNAKVILLEQN  282 (544)
T ss_dssp             HHHHHTTTTCCEEEEECGGGC-CCTTTTBCTHHHHTHHHHCTTCEEEEECEE
T ss_pred             HHHHHHCCCCEEEEEECCCCC-CCCCCCCCHHHHHHHHHHCCCCEEEEECCC
T ss_conf             999972589849998144546-422258998999999974589679982887