33 c2ja1A_ Probab=98.33   E-value=1.9e-06  Score=59.32  Aligned_columns=109  Identities=11%

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf             05881899727887637999999999997099638999726827865312136887897888899899999986297889
Q batch____       133 LDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKV  212 (346)
Q Consensus       133 ~~~~iv~~~GpAGTGKT~la~a~a~~~l~~~~~~rIil~RP~v~ag~~lGfLPGd~~eK~~pyl~pl~d~L~~~~~~~~~  212 (346)
                      .+..|++++||.|+|||.+.....-.+...+  +++++..|+.+.-...+...-...                       
T Consensus         8 ~~G~i~li~Gp~gSGKTt~L~~~l~~~~~~~--~~v~~i~~~~~~r~~~~~i~~~~g-----------------------   62 (193)
T c2ja1A_           8 QNGWIEVICGSMFSGKSEELIRRVRRTQFAK--QHAIVFKPCIDNRYSEEDVVSHNG-----------------------   62 (193)
T ss_dssp             CCCEEEEEEESTTSSHHHHHHHHHHHHHHTT--CCEEEEEETTCCSSCSSEEECTTS-----------------------
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CEEEEECCCCCCHHHCCCEEHHCC-----------------------
T ss_conf             7973999976978978999999999733279--769997286300110145302208-----------------------


Q ss_pred             HHHHHCCCEEEECCHHCCCCCCCC-CEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             999846977995010105874477-689996602499999999998619997699977
Q batch____       213 EKLIERNVIEVAPLAYMRGRTLND-AFIILDESQNTTIEQMKMFLTRIGFNSKAVITG  269 (346)
Q Consensus       213 ~~~~~~~~iei~pl~ymRGRtl~~-~~iIiDEAQn~t~~~mk~~LTR~g~~skiVi~G  269 (346)
                         .....+.+.-...++-.-..+ .+|||||+|+++.+.+..+..-.-.|-.+++.|
T Consensus        63 ---~~~~~~~~~~~~~l~~~l~~~~dvIiIDE~qfl~~~~~e~~~~l~~~g~~Vi~~g  117 (193)
T c2ja1A_          63 ---LKVKAVPVSASKDIFEHITEELDVIAIDEVQFFDGDIVEVVQVLANRGYRVIVAG  117 (193)
T ss_dssp             ---CEEECEEESSGGGGGGGCCSSCCEEEESSGGGSCTTHHHHHHHHHHTTCEEEEEE
T ss_pred             ---CCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             ---4347764480799999974499899986854389889999999997798799994