124 c1a1vA_ Probab=97.26   E-value=0.0017  Score=41.26  Aligned_columns=112  Identities=18%

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH--
Q ss_conf             588189972788763799999999999709963899972682786531213688789788889989999998629788--
Q batch____       134 DHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEK--  211 (346)
Q Consensus       134 ~~~iv~~~GpAGTGKT~la~a~a~~~l~~~~~~rIil~RP~v~ag~~lGfLPGd~~eK~~pyl~pl~d~L~~~~~~~~--  211 (346)
                      .++.+++++|.|+|||   .+....++..+.  +++++-|...+..+                  ++..+...++...  
T Consensus         7 ~~q~~il~apTGsGKT---~~~~~~~~~~g~--~vlvl~P~r~La~~------------------~~~~l~~~~g~~~~~   63 (429)
T c1a1vA_           7 SFQVAHLHAPTGSGKS---TKVPAAYAAQGY--KVLVLNPSVAATLG------------------FGAYMSKAHGVDPNI   63 (429)
T ss_dssp             SCEEEEEECCTTSCTT---THHHHHHHTTTC--CEEEEESCHHHHHH------------------HHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCCCHH---HHHHHHHHHCCC--EEEEECCHHHHHHH------------------HHHHHHHHHCCCHHH
T ss_conf             1976999858988788---999999997797--79998463899899------------------999999751845012


Q ss_pred             ---HHHHHHCCCEEEECCHHCC---CCCCCCCEEEEECCCCCCHHHHHHH-----HHHCCCCCEEEEE
Q ss_conf             ---9999846977995010105---8744776899966024999999999-----9861999769997
Q batch____       212 ---VEKLIERNVIEVAPLAYMR---GRTLNDAFIILDESQNTTIEQMKMF-----LTRIGFNSKAVIT  268 (346)
Q Consensus       212 ---~~~~~~~~~iei~pl~ymR---GRtl~~~~iIiDEAQn~t~~~mk~~-----LTR~g~~skiVi~  268 (346)
                         .......-.|.+.-..++.   ..--+-++||+|||.-.++.....+     +-+...+.++|++
T Consensus        64 ~~~~~~~~~~~~I~v~T~~~ll~~~~~l~~~~~VIiDEaH~~~~~~~~~~~~~~~~~~~~~~~~~i~~  131 (429)
T c1a1vA_          64 RTGVRTITTGSPITYSTYGKFLADGGSGGAYDIIICDECHSTDATSILGIGTVLDQAETAGARLVVLA  131 (429)
T ss_dssp             ECSSCEECCCCSEEEEEHHHHHHTTCCCCCCSEEEEETTTCCSHHHHHHHHHHHHHTTTTTCSEEEEE
T ss_pred             HCCCEEEECCCCEEEECCCHHHCCCCCCCCCCEEEECHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf             21647614798689997118743742026731798304520342221256888876311888379998