Phyre 2 alignment of Q46920 with c4a1dM_

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Job Description | Q46920
Confidence | 10.33% | Date | Thu Jan 5 12:35:53 GMT 2012
Rank | 38 | Aligned Residues | 23
% Identity | 26% | Template | c4a1dM_
PDB info | PDB header:ribosome | Chain: M: PDB Molecule:ribosomal protein l22; | PDBTitle: t.thermophila 60s ribosomal subunit in complex with initiation2 factor 6. this file contains 26s rrna and proteins of3 molecule 4.
Resolution | 3.52 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 77 | . | . | 80 | . | . | . | . | . |  |  |  | . | . | . | . | 90 | . | . | . | . | . | . | . | . | .
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Query Sequence |  | H | V | E | L | D | Y | T | S | V | . | . | . | N | L | I | E | S | K | S | F | K | L | Y | L | N | S
Query Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | F | K | I | D | C | S | Q | P | V | E | D | K | V | I | L | I | G | E | F | A | E | F | L | K | S
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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