Phyre 2 alignment of Q46920 with c2f42A_

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Job Description | Q46920
Confidence | 49.51% | Date | Thu Jan 5 12:35:53 GMT 2012
Rank | 10 | Aligned Residues | 43
% Identity | 19% | Template | c2f42A_
PDB info | PDB header:chaperone | Chain: A: PDB Molecule:stip1 homology and u-box containing protein 1; | PDBTitle: dimerization and u-box domains of zebrafish c-terminal of hsp702 interacting protein
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 179 | 180 | . | . | . | . | . | . | . | . |  |  | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |  |  | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | T | L | V | S | H | L | L | K | S | . | . | N | C | L | I | T | H | Q | P | D | W | G | S | L | Q | I | Q | Y | R | G | . | . | R | Q | I | D | R | E | K | L | L | R | Y | L | V | S | F | R | H | H | N | E | F | H | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | D | I | E | E | H | L | Q | R | V | G | H | F | D | P | V | T | R | S | P | . | . | . | . | . | . | . | . | . | L | T | Q | D | Q | L | I | P | N | L | A | M | K | E | V | I | D | A | F | I | Q | E | N | G | W | V | E
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | T |  | S | B |  | T | T | T |  |  | B | . | . | . | . | . | . | . | . | . |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 236 | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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