Phyre 2 alignment of Q46920 with c3pg6D_

Return to main results | Retrieve Phyre Job Id

Job Description | Q46920
Confidence | 32.56% | Date | Thu Jan 5 12:35:53 GMT 2012
Rank | 13 | Aligned Residues | 12
% Identity | 25% | Template | c3pg6D_
PDB info | PDB header:ligase | Chain: D: PDB Molecule:e3 ubiquitin-protein ligase dtx3l; | PDBTitle: the carboxyl terminal domain of human deltex 3-like
Resolution | 1.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 194 | . | . | . | . | . | 200 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | Q | P | D | W | G | S | L | Q | I | Q | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | Y | E | S | F | G | T | I | V | I | T | Y
Template Known Secondary structure |  | T |  | T | T | S |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 626 | . | . | . | 630 | . | . | . | . | . | . | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions