Phyre 2 alignment of Q46920 with c2f7tA_

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Job Description | Q46920
Confidence | 3.84% | Date | Thu Jan 5 12:35:53 GMT 2012
Rank | 95 | Aligned Residues | 34
% Identity | 21% | Template | c2f7tA_
PDB info | PDB header:dna binding protein | Chain: A: PDB Molecule:mos1 transposase; | PDBTitle: crystal structure of the catalytic domain of mos1 mariner2 transposase
Resolution | 2.25 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 81 | . | . | . | . |  |  | . | . | . | . |  |  |  | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  | . | . |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  | . | . |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | Y | T | S | V | . | . | N | L | I | E | . | . | . | S | K | S | F | K | L | Y | L | N | S | F | N | Q | T | R | F | N | N | W | D | E | V | R | Q | T | L | E | R
Query Conservation |  |  |  |  |  |  | . | . |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  | . | . |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | A | Y | S | P | D | L | A | P | S | D | Y | H | L | F | A | S | M | G | H | A | L | . | . | . | A | E | Q | R | F | D | S | Y | E | S | V | K | K | W | L | D | E
Template Known Secondary structure |  |  | T | T |  | G | G | G |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  | . | . | . |  | T |  |  | B |  | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 274 | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |  |  |  | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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