18/01/2012 10:05:32 : INFO  : Run start: Wed Jan 18 10:05:30 GMT 2012
18/01/2012 10:05:44 : INFO  : Initialised job
18/01/2012 10:05:48 : INFO  : Renaming log file 'phyre2_20120118_100528.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/da6b85928219f7a4/phyre_20120118_100528.log'
18/01/2012 10:05:51 : INFO  : Initialised job:
Sequence
>batch____
MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGLKADNLPFHGTDIWTLY
ELSWLNAKGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQTRFNNWDEVRQTLERDLS
TCAQGKISVALYRLDELEGQPIGHFNGTCIDDQDITIDNYEFTTDYLENATCGEKVVEET
LVSHLLKSNCLITHQPDWGSLQIQYRGRQIDREKLLRYLVSFRHHNEFHEQCVERIFNDL
LRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPSTTRLVRQ

18/01/2012 10:05:54 : INFO  : Checked sequence
18/01/2012 10:06:02 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 10:06:04 : INFO  : PSI-BLAST 3 iterations
18/01/2012 10:07:37 : INFO  : PSI-BLAST 5 iterations
18/01/2012 10:08:44 : INFO  : Finished PSI-BLAST
18/01/2012 10:08:50 : INFO  : Running Buildali to generate a3m file
18/01/2012 10:17:45 : INFO  : Converting to HMM
18/01/2012 10:17:50 : INFO  : Calibrating HMM
18/01/2012 10:18:11 : INFO  : Searching HMM database
18/01/2012 10:23:35 : INFO  : Finished buildali
18/01/2012 10:23:39 : INFO  : Predicting secondary structure
18/01/2012 10:23:58 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 10:24:02 : INFO  : Predicting Disordered regions
18/01/2012 10:24:12 : INFO  : Predicted Disorder (Disopred)
18/01/2012 10:24:15 : INFO  : Running memsat_svm check
18/01/2012 10:29:29 : INFO  : Globular protein
18/01/2012 10:29:31 : INFO  : Predicted Transmembrane (memsat_svm) ID 'da6b85928219f7a4'
18/01/2012 10:29:35 : INFO  : Initialising fold library search
18/01/2012 10:29:46 : INFO  : Initialised search input
18/01/2012 10:29:52 : INFO  : Building Ensemble models
18/01/2012 10:29:59 : INFO  : Building hh.c3bp1A_.model.1.pdb
18/01/2012 10:30:36 : INFO  : Building c3bp1A_.1.pdb
18/01/2012 10:31:10 : INFO  : Building c1wm9D_.2.pdb
18/01/2012 10:31:43 : INFO  : Building d1wura1.3.pdb
18/01/2012 10:32:16 : INFO  : Building c1is7F_.4.pdb
18/01/2012 10:32:48 : INFO  : Building d1wpla_.5.pdb
18/01/2012 10:33:21 : INFO  : Building d1a8ra_.6.pdb
18/01/2012 10:33:54 : INFO  : Building c1rg9D_.7.pdb
18/01/2012 10:34:28 : INFO  : Building c3imlB_.8.pdb
18/01/2012 10:35:02 : INFO  : Building c2obvA_.9.pdb
18/01/2012 10:35:34 : INFO  : Building c2f42A_.10.pdb
18/01/2012 10:36:06 : INFO  : Building c3hjhA_.11.pdb
18/01/2012 10:36:39 : INFO  : Building d3bz6a2.12.pdb
18/01/2012 10:37:11 : INFO  : Building c3pg6D_.13.pdb
18/01/2012 10:37:43 : INFO  : Building d2b2na1.14.pdb
18/01/2012 10:38:16 : INFO  : Building d1j6ra_.15.pdb
18/01/2012 10:38:48 : INFO  : Building d2eyqa4.16.pdb
18/01/2012 10:39:20 : INFO  : Building d2o4ta1.17.pdb
18/01/2012 10:39:53 : INFO  : Building c3gzfD_.18.pdb
18/01/2012 10:40:27 : INFO  : Building c3rv2B_.19.pdb
18/01/2012 10:40:59 : INFO  : Building c3fpnB_.20.pdb
18/01/2012 10:42:09 : INFO  : Finished HH model building
18/01/2012 10:42:13 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 10:43:37 : INFO  : html domain output complete ID 'da6b85928219f7a4'
18/01/2012 11:11:30 : INFO  : Run end  : Wed Jan 18 11:11:28 GMT 2012
