Phyre 2 alignment of Q46920 with c3dclC_

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Job Description | Q46920
Confidence | 6.84% | Date | Thu Jan 5 12:35:53 GMT 2012
Rank | 62 | Aligned Residues | 42
% Identity | 10% | Template | c3dclC_
PDB info | PDB header:structural genomics, unknown function | Chain: C: PDB Molecule:tm1086; | PDBTitle: crystal structure of tm1086
Resolution | 2.25 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . |  | . | 20 | . | . |  |  |  |  | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | A | N | H | Q | A | L | A | G | L | T | L | G | K | S | . | T | D | Y | R | . | . | . | . | D | T | Y | D | A | S | L | L | Q | G | V | P | R | S | L | N | R | D | P | L | G | L | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | G | D | K | I | L | I | K | A | W | G | Q | G | L | K | L | L | D | H | P | D | V | K | V | X | N | I | D | P | D | L | F | E | K | L | G | I | Q | E | K | N | G | K | I | H | V | P
Template Known Secondary structure |  | T | T |  |  |  |  |  |  |  |  |  | T | T |  |  | B | T | T |  | T | T | S |  |  |  | S | B |  |  |  |  |  | T | T | S |  |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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