BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (115 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_C0Z3X8 Integrase (Fragment) n=8 Tax=Enterobacteriaceae ... 223 2e-57 UniRef50_C8U7P7 Integrase n=30 Tax=root RepID=C8U7P7_ECO10 149 2e-35 UniRef50_B5QDA8 Phage integrase family protein n=1 Tax=Salmonell... 104 9e-22 UniRef50_Q483M1 Site-specific recombinase, phage integrase famil... 102 3e-21 UniRef50_Q083S5 Phage integrase family protein n=3 Tax=Shewanell... 100 2e-20 UniRef50_C4U2J7 Phage integrase family protein n=1 Tax=Yersinia ... 99 6e-20 UniRef50_Q8ECV9 Site-specific recombinase, phage integrase famil... 89 3e-17 UniRef50_A3M3W1 Phage integrase n=4 Tax=Acinetobacter baumannii ... 89 6e-17 UniRef50_Q1R2C9 Integrase-like protein n=9 Tax=root RepID=Q1R2C9... 88 1e-16 UniRef50_Q6LRH5 Putative uncharacterized protein n=3 Tax=Vibrion... 86 3e-16 UniRef50_P06155 Integrase n=9 Tax=root RepID=VINT_BPPH8 83 2e-15 UniRef50_B8EF22 Integrase family protein n=3 Tax=Shewanella balt... 81 9e-15 UniRef50_Q2NQD5 Putative phage integrase n=1 Tax=Sodalis glossin... 74 2e-12 UniRef50_Q7MDZ9 Phage integrase n=2 Tax=Vibrio RepID=Q7MDZ9_VIBVY 73 3e-12 UniRef50_B5BIF0 Integrase n=7 Tax=Salmonella enterica subsp. ent... 71 1e-11 UniRef50_B4T1L5 Phage integrase family protein n=12 Tax=Enteroba... 71 1e-11 UniRef50_C6UP78 Integrase n=13 Tax=Escherichia coli O157:H7 RepI... 70 2e-11 UniRef50_A3UDD1 Symbiosis island integrase n=1 Tax=Oceanicaulis ... 70 2e-11 UniRef50_B1JMJ4 Integrase family protein n=2 Tax=Enterobacteriac... 69 4e-11 UniRef50_B7NKE6 Integrase of prophage n=42 Tax=Enterobacteriacea... 69 5e-11 UniRef50_C3NUM0 Phage Integrase n=55 Tax=root RepID=C3NUM0_VIBCJ 69 7e-11 UniRef50_Q74H29 Integrative genetic element Gsu32, integrase n=1... 67 2e-10 UniRef50_B4X5T7 Site-specific recombinase, phage integrase famil... 67 2e-10 UniRef50_Q6LJV6 Hypothetical site-specific recombinase, phageint... 67 2e-10 UniRef50_A5F3U5 Site-specific recombinase, phage integrase famil... 66 3e-10 UniRef50_B6C134 Putative uncharacterized protein n=1 Tax=Nitroso... 65 5e-10 UniRef50_A5EUW8 Bacteriophage P4-like integrase n=3 Tax=root Rep... 65 8e-10 UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX 64 1e-09 UniRef50_B1JDS4 Integrase family protein n=3 Tax=Pseudomonadacea... 64 1e-09 UniRef50_A5PEV9 Symbiosis island integrase (Fragment) n=2 Tax=Er... 64 2e-09 UniRef50_C7SIL5 Integrase B n=113 Tax=Gammaproteobacteria RepID=... 64 2e-09 UniRef50_C2LK76 Putative uncharacterized protein n=1 Tax=Proteus... 64 2e-09 UniRef50_Q5P090 Integrase n=1 Tax=Aromatoleum aromaticum EbN1 Re... 64 2e-09 UniRef50_C8T7N5 Phage integrase family site-specific recombinase... 64 2e-09 UniRef50_A1TXN0 Phage integrase family protein n=1 Tax=Marinobac... 62 5e-09 UniRef50_D0KY10 Integrase family protein n=1 Tax=Halothiobacillu... 62 6e-09 UniRef50_Q0P7K9 Bacteriophage integrase n=8 Tax=Enterobacteriace... 62 6e-09 UniRef50_B0RMR5 Prophage integrase n=3 Tax=Xanthomonas campestri... 62 8e-09 UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium ML... 62 8e-09 UniRef50_C0GR55 Integrase family protein n=1 Tax=Desulfonatronos... 61 1e-08 UniRef50_B0C8U1 Phage integrase family protein n=1 Tax=Acaryochl... 61 1e-08 UniRef50_D2LIX3 Integrase family protein n=1 Tax=Rhodomicrobium ... 60 2e-08 UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria ... 60 2e-08 UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomon... 60 2e-08 UniRef50_UPI00016954D2 DNA integration/recombination/inversion p... 60 3e-08 UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP... 60 3e-08 UniRef50_A5EQ25 P4-like integrase n=1 Tax=Bradyrhizobium sp. BTA... 59 3e-08 UniRef50_B0TQV5 Integrase family protein n=1 Tax=Shewanella hali... 59 4e-08 UniRef50_Q2T016 Site-specific recombinase, phage integrase famil... 59 4e-08 UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp... 59 5e-08 UniRef50_A9MQQ9 Putative uncharacterized protein n=9 Tax=Salmone... 59 5e-08 UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella Rep... 58 8e-08 UniRef50_B6WV41 Putative uncharacterized protein n=1 Tax=Desulfo... 58 1e-07 UniRef50_Q8EJS4 Site-specific recombinase, phage integrase famil... 57 1e-07 UniRef50_A6QCY9 Site-specific recombinase, phage integrase famil... 57 1e-07 UniRef50_B0RRY6 Complete genome, strain B100 n=3 Tax=Proteobacte... 57 1e-07 UniRef50_UPI0001AF6377 prophage PSPPH01, site-specific recombina... 57 2e-07 UniRef50_B5WB94 Integrase n=1 Tax=Burkholderia sp. H160 RepID=B5... 57 2e-07 UniRef50_C6E138 Integrase family protein n=1 Tax=Geobacter sp. M... 56 3e-07 UniRef50_A1WLK0 Phage integrase family protein n=4 Tax=Burkholde... 56 4e-07 UniRef50_A6F4S5 Putative integrase n=1 Tax=Marinobacter algicola... 56 4e-07 UniRef50_A1ANR7 Phage integrase family protein n=1 Tax=Pelobacte... 56 4e-07 UniRef50_Q0AH02 Phage integrase family protein n=2 Tax=Nitrosomo... 56 5e-07 UniRef50_B4W813 Site-specific recombinase, phage integrase famil... 55 5e-07 UniRef50_Q0C1T8 Site-specific recombinase, phage integrase famil... 55 5e-07 UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IG... 55 5e-07 UniRef50_Q8VQN9 CP4-like integrase n=87 Tax=Enterobacteriaceae R... 55 5e-07 UniRef50_C0N6F7 Site-specific recombinase, phage integrase famil... 55 5e-07 UniRef50_Q0BEM8 Phage integrase family protein n=4 Tax=Burkholde... 55 6e-07 UniRef50_C1M393 Bacteriophage integrase n=1 Tax=Citrobacter sp. ... 55 7e-07 UniRef50_A6Q4N1 Site-specific recombinase, phage integrase famil... 55 8e-07 UniRef50_A4F5J8 Putative uncharacterized protein n=1 Tax=uncultu... 55 8e-07 UniRef50_B5F8X4 Integrase n=1 Tax=Salmonella enterica subsp. ent... 55 9e-07 UniRef50_B6B4D0 Integrase n=1 Tax=Rhodobacterales bacterium HTCC... 55 9e-07 UniRef50_UPI0000E0FEDC DNA integration/recombination/inversion p... 55 1e-06 UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepI... 54 1e-06 UniRef50_Q3JN19 Prophage CP4-like integrase n=62 Tax=Proteobacte... 54 1e-06 UniRef50_C3K287 Putative phage integrase n=1 Tax=Pseudomonas flu... 54 1e-06 UniRef50_A1SXI0 Phage integrase n=1 Tax=Psychromonas ingrahamii ... 54 1e-06 UniRef50_Q31FR8 Tyrosine recombinase n=1 Tax=Thiomicrospira crun... 54 1e-06 UniRef50_Q167M4 CP4-like integrase, putative n=40 Tax=Alphaprote... 54 1e-06 UniRef50_Q1QA94 Phage integrase n=1 Tax=Psychrobacter cryohalole... 54 1e-06 UniRef50_C6N3S0 Putative phage integrase family protein n=1 Tax=... 54 2e-06 UniRef50_Q5P707 Phage-related integrase n=2 Tax=Proteobacteria R... 54 2e-06 UniRef50_A7MWW9 Putative uncharacterized protein n=1 Tax=Vibrio ... 54 2e-06 UniRef50_A5PCI3 Phage integrase n=1 Tax=Erythrobacter sp. SD-21 ... 53 2e-06 UniRef50_Q48NQ4 Prophage PSPPH01, site-specific recombinase, pha... 53 3e-06 UniRef50_Q6AR70 Probable prophage integrase n=1 Tax=Desulfotalea... 53 3e-06 UniRef50_A5V414 Phage integrase family protein n=1 Tax=Sphingomo... 53 3e-06 UniRef50_C8QZM9 Integrase family protein n=1 Tax=Desulfurivibrio... 53 3e-06 UniRef50_A5EXV7 Integrase A2 n=6 Tax=Cardiobacteriaceae RepID=A5... 53 3e-06 UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EV... 53 3e-06 UniRef50_UPI00016B0CE6 putative integrase n=1 Tax=Burkholderia p... 53 3e-06 UniRef50_C7I2C4 Putative integrase n=1 Tax=Thiomonas intermedia ... 53 4e-06 UniRef50_A0YFV5 Integrase, phage related protein n=1 Tax=marine ... 52 4e-06 UniRef50_D0SUB2 Predicted protein n=2 Tax=Acinetobacter RepID=D0... 52 4e-06 UniRef50_C6RPH9 Site-specific recombinase, phage integrase famil... 52 4e-06 UniRef50_A3M8S0 Putative integrase n=1 Tax=Acinetobacter baumann... 52 5e-06 UniRef50_D0SJJ0 Phage integrase n=6 Tax=Acinetobacter RepID=D0SJ... 52 5e-06 UniRef50_C0VMW7 Phage integrase n=2 Tax=Acinetobacter RepID=C0VM... 52 6e-06 UniRef50_B0VTB2 Putative prophage integrase n=1 Tax=Acinetobacte... 52 6e-06 UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804... 52 6e-06 UniRef50_A6SWC6 Prophage integrase n=1 Tax=Janthinobacterium sp.... 52 6e-06 UniRef50_A6VC70 Integrase n=11 Tax=Proteobacteria RepID=A6VC70_P... 52 8e-06 UniRef50_D0W4G5 Site-specific recombinase, phage integrase famil... 51 9e-06 UniRef50_B5EWV2 Integrase n=2 Tax=Gammaproteobacteria RepID=B5EW... 51 1e-05 UniRef50_Q72AY5 Integrase, truncation n=1 Tax=Desulfovibrio vulg... 51 1e-05 UniRef50_A8EWJ5 Phage integrase n=1 Tax=Arcobacter butzleri RM40... 51 1e-05 UniRef50_A7H0X5 DNA integration/recombination/inversion protein ... 50 2e-05 UniRef50_D2U0P4 Phage integrase n=1 Tax=Arsenophonus nasoniae Re... 50 2e-05 UniRef50_D1UTM5 Integrase family protein n=1 Tax=Burkholderia sp... 50 2e-05 UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID... 50 2e-05 UniRef50_A3ZAX6 Prophage CP4-like integrase n=2 Tax=Synechococcu... 50 2e-05 UniRef50_A1AUY6 Phage integrase family protein n=2 Tax=Desulfuro... 50 3e-05 UniRef50_P32053 Prophage CP4-57 integrase n=104 Tax=Gammaproteob... 50 3e-05 UniRef50_B9NUX0 Site-specific recombinase, phage integrase famil... 50 3e-05 UniRef50_A7MTL4 Putative uncharacterized protein n=1 Tax=Vibrio ... 50 3e-05 UniRef50_Q1N9F3 Putative integrase prophage protein n=1 Tax=Sphi... 49 4e-05 UniRef50_A4SIA1 Phage integrase family protein n=2 Tax=Gammaprot... 49 4e-05 UniRef50_D2L516 Integrase family protein n=1 Tax=Desulfovibrio s... 49 4e-05 UniRef50_B9Z434 Integrase family protein n=2 Tax=Neisseriaceae R... 49 4e-05 UniRef50_A5G635 Phage integrase family protein n=1 Tax=Geobacter... 49 5e-05 UniRef50_B7N6K6 Prophage CP4-57 integrase n=8 Tax=Enterobacteria... 49 5e-05 UniRef50_D2YQV3 Phage integrase family protein n=2 Tax=Vibrio Re... 49 5e-05 UniRef50_D0J426 Phage integrase n=1 Tax=Comamonas testosteroni C... 49 5e-05 UniRef50_A4VPC8 Site-specific recombinase, phage integrase famil... 49 5e-05 UniRef50_C8Q072 Phage integrase family protein n=1 Tax=Enhydroba... 49 6e-05 UniRef50_Q1Q875 Phage integrase n=3 Tax=Gammaproteobacteria RepI... 49 7e-05 UniRef50_C5V4I9 Integrase family protein n=1 Tax=Gallionella fer... 48 8e-05 UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE4... 48 8e-05 UniRef50_B0U0U5 Phage integrase n=1 Tax=Francisella philomiragia... 48 8e-05 UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium ... 48 8e-05 UniRef50_B6WTC3 Putative uncharacterized protein n=1 Tax=Desulfo... 48 8e-05 UniRef50_Q5E028 Phage family integrase n=2 Tax=Vibrionaceae RepI... 48 9e-05 UniRef50_B8L9U1 Phage integrase family protein n=1 Tax=Stenotrop... 48 9e-05 UniRef50_Q2YCS6 Putative uncharacterized protein n=1 Tax=Nitroso... 48 1e-04 UniRef50_C8UI65 Putative integrase n=1 Tax=Escherichia coli O111... 48 1e-04 UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria ... 48 1e-04 UniRef50_C8PUK8 Phage integrase family protein n=1 Tax=Enhydroba... 48 1e-04 UniRef50_D0SZI9 Integrase n=14 Tax=cellular organisms RepID=D0SZ... 48 1e-04 UniRef50_A5WEP7 Phage integrase family protein n=1 Tax=Psychroba... 47 1e-04 UniRef50_A1SRI6 Phage integrase family protein n=2 Tax=Alteromon... 47 1e-04 UniRef50_B4RZR6 Prophage CP4-like integrase n=2 Tax=Proteobacter... 47 1e-04 UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio R... 47 1e-04 UniRef50_A4VJM8 Integrase n=2 Tax=Gammaproteobacteria RepID=A4VJ... 47 2e-04 UniRef50_C6DZF1 Integrase family protein n=1 Tax=Geobacter sp. M... 47 2e-04 UniRef50_C3MAV8 DNA integration/recombination/invertion protein ... 47 2e-04 UniRef50_Q8W6M6 Putative uncharacterized protein orf1 n=1 Tax=Si... 47 2e-04 UniRef50_Q0F3U9 Prophage CP4-like integrase n=1 Tax=Mariprofundu... 47 2e-04 UniRef50_C8R2J0 Integrase family protein n=1 Tax=Desulfurivibrio... 47 2e-04 UniRef50_B1Y4T5 Integrase family protein n=3 Tax=Betaproteobacte... 47 3e-04 UniRef50_C6RLT7 Phage integrase n=2 Tax=Acinetobacter radioresis... 47 3e-04 UniRef50_B5AXB8 Putative integrase n=1 Tax=Escherichia coli RepI... 46 3e-04 UniRef50_B8J346 Putative phage integrase n=1 Tax=Desulfovibrio d... 46 3e-04 UniRef50_Q4K6S7 Site-specific recombinase, phage integrase famil... 46 3e-04 UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacteriu... 46 3e-04 UniRef50_A4JAY4 Phage integrase family protein n=22 Tax=Bacteria... 46 3e-04 UniRef50_B5F474 Integrase n=26 Tax=Proteobacteria RepID=B5F474_S... 46 3e-04 UniRef50_Q0EWR9 Integrative genetic element Gsu32, integrase n=1... 46 3e-04 UniRef50_C8PFJ4 DNA integration/recombination/inversion protein ... 46 3e-04 UniRef50_B3A9A3 Prophage integrase n=2 Tax=Escherichia coli O157... 46 3e-04 UniRef50_Q3SHC8 Probable cp4-like integrase protein n=1 Tax=Thio... 46 4e-04 UniRef50_B9MGW9 Integrase family protein n=1 Tax=Diaphorobacter ... 46 4e-04 UniRef50_A1WW57 Phage integrase family protein n=4 Tax=Proteobac... 46 5e-04 UniRef50_UPI00016B13C2 phage integrase family protein n=1 Tax=Bu... 46 5e-04 UniRef50_D0BVL9 Phage integrase n=2 Tax=Acinetobacter RepID=D0BV... 46 5e-04 UniRef50_A1BGX1 Phage integrase family protein n=25 Tax=root Rep... 45 5e-04 UniRef50_B1Y3M2 Integrase family protein n=4 Tax=Proteobacteria ... 45 5e-04 UniRef50_Q8DAY4 Integrase n=1 Tax=Vibrio vulnificus RepID=Q8DAY4... 45 5e-04 UniRef50_P08320 Integrase n=31 Tax=root RepID=VINT_BPP4 45 5e-04 UniRef50_Q1GR78 Putative uncharacterized protein n=1 Tax=Sphingo... 45 5e-04 UniRef50_A7FP63 Site-specific recombinase, phage integrase famil... 45 6e-04 UniRef50_P37317 Integrase n=42 Tax=root RepID=VINT_BPSFV 45 6e-04 UniRef50_A1TYD6 Phage integrase family protein n=1 Tax=Marinobac... 45 6e-04 UniRef50_A0Q4W3 Phage integrase n=4 Tax=Francisella RepID=A0Q4W3... 45 7e-04 UniRef50_Q1NGR6 Putative phage integrase n=1 Tax=Sphingomonas sp... 45 7e-04 UniRef50_B8ERI0 Integrase family protein n=1 Tax=Methylocella si... 45 8e-04 UniRef50_C4GIW0 Putative uncharacterized protein n=1 Tax=Kingell... 45 8e-04 UniRef50_A3M8T8 Phage integrase n=1 Tax=Acinetobacter baumannii ... 45 9e-04 UniRef50_A7ZQ61 Phage integrase family protein n=32 Tax=Gammapro... 45 9e-04 UniRef50_UPI00016937EF ISXoo5 transposase n=2 Tax=Xanthomonas or... 45 0.001 UniRef50_A4Y9I4 Phage integrase family protein n=3 Tax=Shewanell... 45 0.001 UniRef50_P39347 Putative prophage P4 integrase n=97 Tax=Enteroba... 44 0.001 UniRef50_Q3J1E6 Possible phage-related integrase n=2 Tax=Rhodoba... 44 0.001 UniRef50_C8KXV2 Prophage CP4-57-like integrase n=1 Tax=Actinobac... 44 0.001 UniRef50_A0KW55 Phage integrase family protein n=30 Tax=Gammapro... 44 0.002 UniRef50_A9FYM8 Site-specific recombinase, phage integrase famil... 44 0.002 UniRef50_C3XC22 Integrase n=3 Tax=Oxalobacter formigenes RepID=C... 44 0.002 UniRef50_Q8XZB0 Putative integrase-like protein n=1 Tax=Ralstoni... 44 0.002 UniRef50_Q0TL05 Phage integrase n=6 Tax=Escherichia coli RepID=Q... 44 0.002 UniRef50_A1WTV4 Phage integrase family protein n=1 Tax=Halorhodo... 44 0.002 UniRef50_A0Q3W3 Phage integrase n=8 Tax=Francisella RepID=A0Q3W3... 44 0.002 UniRef50_C7JF17 Phage DNA recombinase n=8 Tax=Acetobacter pasteu... 44 0.002 UniRef50_A1ATP4 Phage integrase family protein n=2 Tax=Desulfuro... 44 0.002 UniRef50_A1AQX4 Phage integrase family protein n=1 Tax=Pelobacte... 44 0.002 UniRef50_C5RZC7 Phage integrase family protein n=1 Tax=Actinobac... 43 0.003 UniRef50_C1TL52 Integrase n=1 Tax=Dethiosulfovibrio peptidovoran... 43 0.003 UniRef50_Q2T3P2 Integrase n=31 Tax=pseudomallei group RepID=Q2T3... 43 0.004 UniRef50_Q144A9 Putative bacteriophage integrase n=1 Tax=Burkhol... 43 0.004 UniRef50_B9R4Q2 Site-specific recombinase, phage integrase famil... 43 0.004 UniRef50_Q1GLB2 Phage integrase n=12 Tax=Rhodobacterales RepID=Q... 43 0.004 UniRef50_C4LB72 Integrase family protein n=9 Tax=Gammaproteobact... 43 0.004 UniRef50_A4SSF4 Phage integrase n=3 Tax=Proteobacteria RepID=A4S... 43 0.004 UniRef50_UPI00019048C6 phage integrase n=1 Tax=Rhizobium etli Br... 43 0.004 UniRef50_A1U0R6 Phage integrase family protein n=2 Tax=Gammaprot... 43 0.004 UniRef50_A9I0E1 Phage-related integrase n=5 Tax=Burkholderiales ... 42 0.004 UniRef50_A7JZW2 Site-specific recombinase, phage integrase famil... 42 0.004 UniRef50_B8GNQ7 Phage integrase family protein n=6 Tax=Proteobac... 42 0.004 UniRef50_B7I7W7 Integrase n=4 Tax=Pseudomonadales RepID=B7I7W7_A... 42 0.005 UniRef50_Q4QNN7 Prophage CP4-57-like integrase n=4 Tax=Haemophil... 42 0.005 UniRef50_D0CDZ4 DNA integration/recombination/inversion protein ... 42 0.005 UniRef50_Q7MKK6 Integrase n=6 Tax=Proteobacteria RepID=Q7MKK6_VIBVY 42 0.005 UniRef50_A1WQF8 Phage integrase family protein n=1 Tax=Vermineph... 42 0.005 UniRef50_B5JBP0 Site-specific recombinase, phage integrase famil... 42 0.006 UniRef50_Q1LLV0 Site specific recombinase n=1 Tax=Cupriavidus me... 42 0.006 UniRef50_A7JSX8 Bacteriophage integrase n=3 Tax=Pasteurellaceae ... 42 0.006 UniRef50_Q0A9S4 Phage integrase family protein n=1 Tax=Alkalilim... 42 0.007 UniRef50_B5K270 Integrase n=1 Tax=Octadecabacter antarcticus 238... 42 0.008 UniRef50_Q5P749 Similar to phage-related integrase n=3 Tax=Bacte... 42 0.008 UniRef50_C8NCE3 Phage integrase family site-specific recombinase... 42 0.008 UniRef50_Q21D10 Phage integrase n=3 Tax=Alphaproteobacteria RepI... 42 0.008 UniRef50_B1FYC4 Phage integrase n=2 Tax=Burkholderia RepID=B1FYC... 42 0.008 UniRef50_C6BFQ2 Integrase family protein n=4 Tax=Betaproteobacte... 42 0.009 UniRef50_A9N695 Putative uncharacterized protein n=1 Tax=Salmone... 42 0.009 UniRef50_A4A7S2 Phage-related integrase n=1 Tax=Congregibacter l... 42 0.009 UniRef50_A3UV17 Phage integrase n=1 Tax=Vibrio splendidus 12B01 ... 41 0.009 UniRef50_Q4QL03 Prophage CP4-57-like integrase n=11 Tax=Haemophi... 41 0.010 UniRef50_Q5P855 Phage integrase n=5 Tax=Proteobacteria RepID=Q5P... 41 0.010 UniRef50_Q1QLT5 Phage integrase n=2 Tax=Alphaproteobacteria RepI... 41 0.010 UniRef50_A1W8P6 Phage integrase family protein n=4 Tax=Comamonad... 41 0.010 UniRef50_Q6LTT6 Hypothetical integrase n=1 Tax=Photobacterium pr... 41 0.010 UniRef50_A0YCY6 Integrative genetic element Gsu32, integrase, pu... 41 0.011 UniRef50_B8F555 CP4-57 prophage, integrase n=1 Tax=Haemophilus p... 41 0.011 UniRef50_Q1NEP8 Putative integrase n=1 Tax=Sphingomonas sp. SKA5... 41 0.012 UniRef50_D2MI75 Phage integrase family protein n=1 Tax=Candidatu... 41 0.012 UniRef50_Q93UI5 Integrase-like gene 1 n=1 Tax=Escherichia coli R... 41 0.013 UniRef50_Q39TC0 Phage integrase n=1 Tax=Geobacter metallireducen... 41 0.013 UniRef50_B6QXT6 Phage integrase n=2 Tax=Pseudovibrio sp. JE062 R... 41 0.014 UniRef50_C6RGV6 Phage integrase n=3 Tax=Campylobacter RepID=C6RG... 41 0.015 UniRef50_Q3SUE5 Phage integrase n=6 Tax=Alphaproteobacteria RepI... 41 0.015 UniRef50_A6F6W3 Putative uncharacterized protein n=1 Tax=Moritel... 41 0.015 UniRef50_UPI00003841F3 COG0582: Integrase n=1 Tax=Magnetospirill... 40 0.016 UniRef50_C6XJP3 Integrase family protein n=1 Tax=Hirschia baltic... 40 0.016 UniRef50_C3NXV5 Phage Integrase n=17 Tax=Vibrio RepID=C3NXV5_VIBCJ 40 0.017 UniRef50_B3R9I1 Prophage INTEGRASE PROTEIN n=1 Tax=Cupriavidus t... 40 0.018 UniRef50_D2LKM4 Integrase family protein n=1 Tax=Rhodomicrobium ... 40 0.019 UniRef50_A6FV67 Hypothetical integrase n=1 Tax=Roseobacter sp. A... 40 0.019 UniRef50_Q13W63 Putative phage integrase n=2 Tax=Burkholderia Re... 40 0.019 UniRef50_Q8DF52 Phage integrase n=1 Tax=Vibrio vulnificus RepID=... 40 0.021 UniRef50_A5ELC2 Putative prophage integrase n=2 Tax=Bradyrhizobi... 40 0.023 >UniRef50_C0Z3X8 Integrase (Fragment) n=8 Tax=Enterobacteriaceae RepID=C0Z3X8_ECOLX Length = 106 Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 106/106 (100%), Positives = 106/106 (100%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS Sbjct: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD 106 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD Sbjct: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD 106 >UniRef50_C8U7P7 Integrase n=30 Tax=root RepID=C8U7P7_ECO10 Length = 414 Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 67/110 (60%), Positives = 83/110 (75%), Gaps = 1/110 (0%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 +A+SDTKLR +YGKPYSGP E+ D DGLSVRI+P G I FQYRYRW+GKP RL +GRYPS Sbjct: 26 LALSDTKLRGLYGKPYSGPAEITDGDGLSVRITPAGTITFQYRYRWNGKPVRLTVGRYPS 85 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVS 110 SLKDAR I ++R LY G +P+ YF + +T+ +CLD W+D YVS Sbjct: 86 TSLKDARVIVGEMRALYMKGVNPKNYFAPS-DGELTLKECLDQWWDKYVS 134 >UniRef50_B5QDA8 Phage integrase family protein n=1 Tax=Salmonella enterica subsp. enterica serovar Virchow str. SL491 RepID=B5QDA8_SALVI Length = 403 Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 54/110 (49%), Positives = 70/110 (63%), Gaps = 3/110 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DTKLR I GKPY GP E+ D GLSVRISPKG+I FQYRYR++GKP RL LG Y S Sbjct: 1 MPLNDTKLRRIDGKPYDGPVEIPDGGGLSVRISPKGLITFQYRYRFNGKPVRLKLGVYGS 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWFDN 107 +S+K+AR +K G +P Y ++K S +A ++ W D Sbjct: 61 MSIKEARDAVEVCKKWLSEGKNPAVYRKLDKKKKTESPDIATLVNEWLDT 110 >UniRef50_Q483M1 Site-specific recombinase, phage integrase family n=3 Tax=Gammaproteobacteria RepID=Q483M1_COLP3 Length = 390 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 55/114 (48%), Positives = 69/114 (60%), Gaps = 2/114 (1%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SDTKLR I PY+G E+AD DGLSVR+SPK +I F YR+RW GK R+ LGRYP Sbjct: 1 MALSDTKLRKIKA-PYNGEAELADRDGLSVRVSPKALITFNYRFRWEGKQQRIKLGRYPG 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 L L DAR+ + R G DPR E +++ C + + YV T LR Sbjct: 60 LKLIDARKKVNEYRHNLDEGLDPRVVQNESRSHNLFGDMC-EAFMTKYVMTELR 112 >UniRef50_Q083S5 Phage integrase family protein n=3 Tax=Shewanella RepID=Q083S5_SHEFN Length = 403 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 46/90 (51%), Positives = 64/90 (71%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M++SDT+LR+I GKPY+G E+AD DGLSVRIS G I +QYR+R+ RL LGRYP Sbjct: 1 MSLSDTQLRSINGKPYTGKPEIADRDGLSVRISNAGTITWQYRFRFRSSVGRLTLGRYPD 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEK 90 + L +AR+ +LR + TDPR Y++++ Sbjct: 61 VKLSEARKFVPELRNALANDTDPRVYWKQR 90 >UniRef50_C4U2J7 Phage integrase family protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U2J7_YERKR Length = 369 Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 46/109 (42%), Positives = 72/109 (66%), Gaps = 3/109 (2%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +SD KLR + GKP E+ D+ GLS+R++P G++ FQYRYR+ KP R+ LG Y L Sbjct: 11 VLSDAKLRKLSGKPIPKLIEMPDSGGLSIRVTPLGLVVFQYRYRFGVKPRRMTLGVYDDL 70 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWFDN 107 SLK+AR++ + +++ SG DP E ++EN S+TV+ C+ +W ++ Sbjct: 71 SLKEAREMVQESKRILLSGRDPIIVKEMELENKVASVTVSLCIKHWLES 119 >UniRef50_Q8ECV9 Site-specific recombinase, phage integrase family n=1 Tax=Shewanella oneidensis RepID=Q8ECV9_SHEON Length = 419 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 50/114 (43%), Positives = 61/114 (53%), Gaps = 4/114 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD+ L+ K P E AD DGLSVR+S KG I FQ RYRW R+ +G YP Sbjct: 1 MALSDSWLKANLNKVADKPYEKADRDGLSVRVSAKGAITFQMRYRWASNAARVDIGPYPL 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEK----VENSMTVAQCLDYWFDNYVS 110 LSLK+AR+ RKL DPR Y +K V N +V Q W + S Sbjct: 61 LSLKEAREQCEAYRKLLLDNQDPREYKRDKAAKAVSNEGSVEQVFRAWHKSQFS 114 >UniRef50_A3M3W1 Phage integrase n=4 Tax=Acinetobacter baumannii RepID=A3M3W1_ACIBT Length = 401 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 45/111 (40%), Positives = 67/111 (60%), Gaps = 3/111 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+++ L+ GK +E+AD D +SVRISPKG I FQ RYR+ GK RL LG YP Sbjct: 1 MALTEVWLKANNGKARDKVEEIADRDSMSVRISPKGKIVFQLRYRFAGKAERLDLGTYPH 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWFDNY 108 +SLKDAR ++R L G +P+ ++K ++ T + + W+++Y Sbjct: 61 MSLKDARIKAGEMRSLLDKGMNPKVEVRVQQQKYIDASTFEEVFNDWYESY 111 >UniRef50_Q1R2C9 Integrase-like protein n=9 Tax=root RepID=Q1R2C9_ECOUT Length = 404 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 3/111 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD LR++ GK +D DGLSVR+SPKG + FQYRY+W GK RL +G YP+ Sbjct: 1 MALSDAWLRSVVGKERDKVLVKSDRDGLSVRVSPKGRVVFQYRYQWAGKGERLDIGTYPA 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWFDNY 108 LK+AR+ LR S +PR + K +MTV + W++ Y Sbjct: 61 TGLKEAREEVIRLRGELESNRNPRLVKQAEKRKATEAMTVESVIRAWYEAY 111 >UniRef50_Q6LRH5 Putative uncharacterized protein n=3 Tax=Vibrionaceae RepID=Q6LRH5_PHOPR Length = 391 Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 71/110 (64%), Gaps = 2/110 (1%) Query: 1 MAISDTKLRTIYG-KPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 M++ D +LR I K Y GP ++ D DGL RI+P+ +I FQYR R++GK R+ +G+YP Sbjct: 1 MSLLDRRLRIISKLKTYDGPAQLNDGDGLIARITPRAIITFQYRCRFNGKQLRIHIGKYP 60 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYV 109 + SLK+AR+ + +L SG +P+ + ++ +T+ C++YW +YV Sbjct: 61 ATSLKEARRKHKIMMELRESGRNPKIANTGE-QDFVTLDDCVNYWLKHYV 109 >UniRef50_P06155 Integrase n=9 Tax=root RepID=VINT_BPPH8 Length = 402 Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 3/110 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 I+DTKLR GK + ++D+ GL+ RIS G I F YRYRW GK +L +G YP++S Sbjct: 7 ITDTKLRKALGKKRDDIEIISDSHGLNARISQAGKISFFYRYRWAGKAVKLNVGDYPAMS 66 Query: 63 LKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWFDNYV 109 + AR+ R G DPR ++ + +M+VA+ +YW + + Sbjct: 67 ITQARERRQQFRNWLTEGLDPREQVKLDKQTRQEAMSVAEAFNYWIERHC 116 >UniRef50_B8EF22 Integrase family protein n=3 Tax=Shewanella baltica RepID=B8EF22_SHEB2 Length = 410 Score = 81.3 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 3/107 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD+ L+ GK E AD DGLSVR+SPKG + FQ RYR+ GK +RL LG YP+ Sbjct: 1 MALSDSWLKANSGKEIDKAYEKADRDGLSVRVSPKGKLTFQLRYRYIGKASRLDLGSYPA 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYW 104 SLK AR L+ G DP+ ++EN+ T++ W Sbjct: 61 TSLKSARTECLRLKGELEKGYDPKLVKINDRIEIENAPTISDLFYRW 107 >UniRef50_Q2NQD5 Putative phage integrase n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NQD5_SODGM Length = 332 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 3/110 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD KLR + G P + AD GLSVR+S G I + + YR G R+ LGRYP +S Sbjct: 20 LSDKKLRNLLGVPRDKYEFFADGAGLSVRVSTVGGISWTFTYRNSGTIQRVTLGRYPDMS 79 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWFDNYV 109 LK AR+ + R G DPR + + S+ TV + ++YW +Y Sbjct: 80 LKRAREKRDECRTWLSEGKDPRRQLKLIKQESLKPVTVREAIEYWIKHYA 129 >UniRef50_Q7MDZ9 Phage integrase n=2 Tax=Vibrio RepID=Q7MDZ9_VIBVY Length = 422 Score = 73.2 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 2/109 (1%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D LR GKPYSG E+ +GL VRISPKG I + YR + GKP ++ +G YP Sbjct: 1 MKLTDAWLRAHAGKPYSGKAEITYKNGLGVRISPKGKITWIYRALFKGKPIKMKIGEYPL 60 Query: 61 LSLKDARQITADLRKLYFSGTDPR--TYFEEKVENSMTVAQCLDYWFDN 107 + +K+A + +L G DPR + +TV+Q ++++ +N Sbjct: 61 MKIKEATEERDRFFELIQQGVDPRNKSILILNSNAPVTVSQVVEHYIEN 109 >UniRef50_B5BIF0 Integrase n=7 Tax=Salmonella enterica subsp. enterica RepID=B5BIF0_SALPK Length = 133 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 49/82 (59%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DTKLR GK + ++DA GL+VR+S G I F YRYRW+G +L +G YP++S Sbjct: 16 LADTKLRKAPGKKRDQIKVISDAHGLNVRLSTSGSITFFYRYRWNGNAAQLTIGDYPTIS 75 Query: 63 LKDARQITADLRKLYFSGTDPR 84 L AR+ R G DPR Sbjct: 76 LSHARERRQYFRSWLTEGLDPR 97 >UniRef50_B4T1L5 Phage integrase family protein n=12 Tax=Enterobacteriaceae RepID=B4T1L5_SALNS Length = 409 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/84 (41%), Positives = 50/84 (59%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MAISD+ L++ G+ +E AD DGL VRIS KG + F YR+R+ GK +++ +G YP Sbjct: 1 MAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGNYPE 60 Query: 61 LSLKDARQITADLRKLYFSGTDPR 84 LK AR+ + G +PR Sbjct: 61 FGLKAAREEVTKWAAILARGENPR 84 >UniRef50_C6UP78 Integrase n=13 Tax=Escherichia coli O157:H7 RepID=C6UP78_ECO5T Length = 301 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 6/109 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DTK+R+ KP + D DG+S+ + P G +++R+R+ GK + + G YP Sbjct: 27 MALTDTKVRS--AKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPD 84 Query: 61 LSLKDARQITADLRKLYFSGTDPRTY----FEEKVENSMTVAQCLDYWF 105 +SL DAR+ + RKL +G DPR + EE+ + +T + W Sbjct: 85 VSLADARKKREEARKLVAAGIDPREHKRAVKEEQAKEIITFEKVAREWL 133 >UniRef50_A3UDD1 Symbiosis island integrase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UDD1_9RHOB Length = 406 Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 5/115 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D K+R + KP V+D++GLS+ ++PKG +++RYR++GK +GLGRYPS Sbjct: 1 MPLTDAKIRAL--KPADTLYRVSDSNGLSIEVTPKGDRYWRFRYRFNGKAQMMGLGRYPS 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 +SLK AR R+L G +P E+ +AQ F + + LR+ Sbjct: 59 VSLKKARSKRDHYRELLDEGLNPSL---ERQTRQQELAQLEQSSFGSIATEFLRK 110 >UniRef50_B1JMJ4 Integrase family protein n=2 Tax=Enterobacteriaceae RepID=B1JMJ4_YERPY Length = 407 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 6/116 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG---KPNRLGLGRYP 59 +SD KL++++ + AD GLS ++S +G I + + YR G K RL GRYP Sbjct: 7 LSDKKLKSLHCINSDSVKMFADGAGLSAKVSAQGSISWVFTYRLGGRESKLERLVFGRYP 66 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWFDNYVSTT 112 ++LK AR R G DPR E V ++ TV L YW DNY T Sbjct: 67 DMTLKAARDRRDQCRTWLAGGCDPRRQLLEDVTQTLKPVTVKDALLYWVDNYAQTN 122 >UniRef50_B7NKE6 Integrase of prophage n=42 Tax=Enterobacteriaceae RepID=B7NKE6_ECO7I Length = 416 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 7/113 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH----GKPNRLGLGRY 58 +SDT+LR I G P + D LSVR S G++ + + YR P R+ LG Y Sbjct: 15 LSDTQLRKINGTPAQKTAFLNDGGNLSVRHSTSGLLTWYFTYRAGTGRGAPPERIKLGNY 74 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWFDNY 108 P LSLK AR+ A R G +PR V+ ++ TV L YW ++Y Sbjct: 75 PDLSLKSAREKAAQCRAWLAEGKNPRHELNYTVQEALKPVTVGDALTYWLESY 127 >UniRef50_C3NUM0 Phage Integrase n=55 Tax=root RepID=C3NUM0_VIBCJ Length = 413 Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 3/118 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+S + L K AD DGLS R+SPKG I FQ+RYR+ GK R+ +G YP Sbjct: 1 MALSVSWLDARLNKEAKETVVKADRDGLSARVSPKGKIVFQFRYRFDGKQQRVDIGTYPL 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEE---KVENSMTVAQCLDYWFDNYVSTTLRE 115 + L +AR LR + G +P+ Y ++ K + + W D+ L+E Sbjct: 61 MKLAEARNELDRLRAVLDQGRNPKLYLQQERAKYSANQSFESIFRDWIDSAGKQGLKE 118 >UniRef50_Q74H29 Integrative genetic element Gsu32, integrase n=1 Tax=Geobacter sulfurreducens RepID=Q74H29_GEOSL Length = 439 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 5/111 (4%) Query: 4 SDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSL 63 SD LR + KP P ++ + DG VR+ P G F Y Y + GK L LG+YP LSL Sbjct: 9 SDKFLRAL--KPQEKPYDIREGDGFGVRVFPSGARSFFYMYHFDGKRRFLNLGKYPQLSL 66 Query: 64 KDARQITADLRKLYFSGTDPRTYFEEKV---ENSMTVAQCLDYWFDNYVST 111 DARQ D + G DP +E+ ++TVA +D + N+ Sbjct: 67 ADARQKHRDAVSQHAKGIDPLAATQEQKRERREAITVADLIDEYVKNWAKV 117 >UniRef50_B4X5T7 Site-specific recombinase, phage integrase family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X5T7_9GAMM Length = 398 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 7/114 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD K+R KP ++D +G+ + ISPKG ++++YR++GK RL LG YPS S Sbjct: 6 LSDVKIRA--AKPQDKLYSISDGEGMFLEISPKGGKWWRFKYRFNGKQKRLSLGTYPSTS 63 Query: 63 LKDARQITADLRKLYFSGTDP---RTYFEEKVENSM--TVAQCLDYWFDNYVST 111 LK AR R+L SG DP R + E ++ T A + W N V + Sbjct: 64 LKAARDKRQQARELLASGVDPAQQRKTEKLATETALRNTFAGVAEEWAQNKVRS 117 >UniRef50_Q6LJV6 Hypothetical site-specific recombinase, phageintegrase family n=3 Tax=Photobacterium profundum RepID=Q6LJV6_PHOPR Length = 424 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 3/115 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DT L+ + K + D DGL +R+S +G I F RYR GK + + LG YP LS Sbjct: 13 LNDTTLKKMLKKSREKLARLPDRDGLYIRVSTRGKIVFYIRYRIGGKQDSMDLGEYPLLS 72 Query: 63 LKDARQITADLRKLYFSGTDPRT---YFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 LK+AR + R L G +P+ ++K+ +++T+ W++ T++ Sbjct: 73 LKEARNRNEEYRALLQDGHNPKVEKRLRQKKISDAVTLKDLFYLWYEKECKVTIK 127 >UniRef50_A5F3U5 Site-specific recombinase, phage integrase family n=5 Tax=Vibrio RepID=A5F3U5_VIBC3 Length = 411 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 3/111 (2%) Query: 5 DTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLK 64 D L+ + K + + D DGL R+S +G +++Q+RY+ +G R+ LG YP LSL Sbjct: 6 DKHLKAVLNKSHLKVFTLTDGDGLGARVSLQGNVRWQFRYKINGASKRVDLGDYPDLSLL 65 Query: 65 DARQITADLRKLYFSGTDP---RTYFEEKVENSMTVAQCLDYWFDNYVSTT 112 AR+ R+ G DP R+ ++ ++V L+YW Y + Sbjct: 66 KAREEAQKCREWLAEGHDPKLQRSVIRQETLKPVSVQDALEYWLVEYAESN 116 >UniRef50_B6C134 Putative uncharacterized protein n=1 Tax=Nitrosococcus oceani AFC27 RepID=B6C134_9GAMM Length = 189 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 11/116 (9%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT +R KP +++ D+ GL + ++P G ++ +YR+ GK RL LG YP Sbjct: 1 MPLTDTTIRN--AKPGDKAKKLFDSGGLYLEVAPSGGKWWRLKYRFGGKEKRLSLGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDP-------RTYFEEKVENSMTVAQCLDYWFDNYV 109 +SLKDAR+ + RKL + DP + EE+V NS V WF +V Sbjct: 59 VSLKDARERRDEARKLLANEIDPSENRRAKKAAREERVANSFEVVA--REWFAKHV 112 >UniRef50_A5EUW8 Bacteriophage P4-like integrase n=3 Tax=root RepID=A5EUW8_DICNV Length = 399 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 4/102 (3%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD KLR + KP ++AD+ GL + P G I ++ RY GK L LG+YP++S Sbjct: 2 LSDAKLRKL--KPTEKKYKIADSHGLFAVVMPNGSILWRMRYVLAGKRRELALGKYPAVS 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEE--KVENSMTVAQCLD 102 L +ARQI R+ G DP E K ++ +TVA+ ++ Sbjct: 60 LSEARQIVLLYREQIERGVDPHAQHVERHKKQDGVTVAEAVE 101 >UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX Length = 394 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 3/103 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K++T KP P ++AD G+ + I+ G ++ +YR+ GK L +G YP Sbjct: 1 MALTDIKVKT--AKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDP-RTYFEEKVENSMTVAQCLD 102 ++L DAR+ ++ RKL +G DP EEK+ M++ + Sbjct: 59 VTLADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFE 101 >UniRef50_B1JDS4 Integrase family protein n=3 Tax=Pseudomonadaceae RepID=B1JDS4_PSEPW Length = 402 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 2/86 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT +RT +P +ADA GL + ++ G ++ RYR+ GK LGLG YPS Sbjct: 1 MALTDTAIRT--ARPRDKLYRIADAQGLCLEVTTAGGKLWRLRYRFEGKAKMLGLGTYPS 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTY 86 ++L AR+ RKL G DP Y Sbjct: 59 VTLAHARERRDAARKLLSQGIDPSAY 84 >UniRef50_A5PEV9 Symbiosis island integrase (Fragment) n=2 Tax=Erythrobacter sp. SD-21 RepID=A5PEV9_9SPHN Length = 163 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 7/116 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT+LR + KP P +V D GL V ++P G +++RYR G +L +G YP Sbjct: 1 MPLTDTRLRAL--KPKDKPYKVTDERGLYVEVTPTGSKLWRFRYRIGGAQKKLCIGSYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEE---KVENSMTVAQCLDYWFDNYVSTTL 113 +SLK AR + R+ SG DP FE+ K+ AQ + Y+ + Sbjct: 59 ISLKQARDAAYEARRAVASGGDP--AFEKRKRKIRAEFLSAQTFEAVAREYIEQMM 112 >UniRef50_C7SIL5 Integrase B n=113 Tax=Gammaproteobacteria RepID=C7SIL5_ECOLX Length = 420 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++D K+RT+ KP P +V+D+ GL + + P G + +YR +GK +R+ LG YP+ Sbjct: 1 MSLTDAKIRTL--KPSDKPFKVSDSHGLYLLVKPGGSRHWYLKYRINGKESRIALGAYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL DARQ +RK+ +P Sbjct: 59 VSLSDARQQREGVRKMLALNINP 81 >UniRef50_C2LK76 Putative uncharacterized protein n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LK76_PROMI Length = 142 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SDTK+R+ K ++ D +GL + + P G +++RYR+ GK L G YP Sbjct: 27 MALSDTKVRS--AKSEDKAYKLTDGNGLFLLVHPNGSKYWRFRYRFGGKEKMLAFGVYPD 84 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL +AR+ + RKL SG DP Sbjct: 85 ISLANAREKRDEARKLVASGVDP 107 >UniRef50_Q5P090 Integrase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P090_AZOSE Length = 402 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 7/116 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D +R + G + P ++AD GL + ++P G ++YR+R GK N +G YP Sbjct: 1 MQLTDKAIRGVKGG--AKPVKMADGGGLYLEVTPAGGKLWRYRFRLAGKENVFAIGAYPR 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVST 111 +SL DAR+ + R L G +P Y ++ EN T A D W+ + V + Sbjct: 59 VSLADARKARDEARDLVKQGFNPSHYRQQAKQAVIDENLNTFAPVADEWYQSKVDS 114 >UniRef50_C8T7N5 Phage integrase family site-specific recombinase (Fragment) n=11 Tax=Enterobacteriaceae RepID=C8T7N5_KLEPR Length = 188 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++D K+RT+ KP P +V+D+ GL + + P G + +YR +GK +R+ LG YP+ Sbjct: 1 MSLTDAKIRTL--KPSDKPFKVSDSHGLYLLVKPGGSRHWYLKYRINGKESRIALGAYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL DARQ +RK+ +P Sbjct: 59 VSLSDARQQREGVRKMLALNINP 81 >UniRef50_A1TXN0 Phage integrase family protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXN0_MARAV Length = 396 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 3/88 (3%) Query: 27 GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTY 86 GL++RIS +G + YR+R+ GK + + LGRYP+ SL +AR + D L G +P+ Sbjct: 8 GLAIRISIRGTKTWFYRFRFRGKQDAVSLGRYPTTSLLEARDVHGDACALLAKGINPKKA 67 Query: 87 FEEK---VENSMTVAQCLDYWFDNYVST 111 F+E E + T + D W Y ST Sbjct: 68 FKESKKVAEQTWTGQELFDDWIRVYSST 95 >UniRef50_D0KY10 Integrase family protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KY10_HALNC Length = 427 Score = 62.0 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT ++ + KP S P +V D GL + ++P G ++ YR+ GK L LG YP Sbjct: 1 MALTDTAIKAL--KPESKPYKVTDEKGLYLFVTPAGGKLWRLDYRFEGKRKTLALGGYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 ++LK AR + R+L +GTDP Sbjct: 59 VNLKQARVYRDEARQLIANGTDP 81 >UniRef50_Q0P7K9 Bacteriophage integrase n=8 Tax=Enterobacteriaceae RepID=Q0P7K9_ECOLX Length = 423 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++D K+R++ KP P +V+D+ GL + + P G + +YR +GK +R+ LG YP+ Sbjct: 1 MSLNDAKIRSL--KPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL DARQ +RK+ +P Sbjct: 59 VSLSDARQQREGIRKMLALNINP 81 >UniRef50_B0RMR5 Prophage integrase n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RMR5_XANCB Length = 148 Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD +R P P + D GL V ISPKG ++++YR+ GK RL LG YP Sbjct: 1 MPLSDAAVRN--ATPADKPVRLFDGGGLYVEISPKGAKLWRWKYRFGGKEKRLALGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL + R + RK+ SG DP Sbjct: 59 VSLAEVRAQHLEARKVLRSGIDP 81 >UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NM52_9DELT Length = 406 Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 6/108 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD +LR I +P E+ D GL + + P G + RY++ GKP R+ LG YP Sbjct: 1 MGLSDAQLRKI--RPRESRFELTDGKGLVLLVLPSGRRSWLLRYQFEGKPRRITLGEYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDP---RTYFEEKVENSMTVAQCL-DYW 104 +SL AR + R + G DP RT + + S TV+ L +YW Sbjct: 59 MSLLQARNASEATRSIIKQGLDPALKRTEEKTAHKTSPTVSDLLTEYW 106 >UniRef50_C0GR55 Integrase family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR55_9DELT Length = 401 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 5/113 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++D +++ + KP S V D DG+ + ++P G ++++YR++GK L LG+YP Sbjct: 1 MSLTDVQVKGL--KPGSTKYRVKDKDGMYLEVTPAGGKLWRFKYRFNGKNKLLALGKYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE--EKVENSMTVAQCLDYWFDNYVST 111 +SL AR+ + R+ G DP Y + EK E T D W+ ST Sbjct: 59 VSLAKAREKLSIARQQIAEGKDP-AYIKKIEKAEKENTFKAITDEWWRAKKST 110 >UniRef50_B0C8U1 Phage integrase family protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8U1_ACAM1 Length = 399 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 7/106 (6%) Query: 6 TKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKD 65 T L+ KP +G ++D GL ++I+P G ++YRYR GK + +G YP L L + Sbjct: 7 TDLQVRNAKPKTGSYRLSDGGGLFLQITPAGGKHWKYRYRIQGKESTFSIGSYPELGLGE 66 Query: 66 ARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQ------CLDYWF 105 AR + R+L G +P T ++++ S+ +AQ D WF Sbjct: 67 ARAKHLEARRLVAQGLNPTTE-AKRLQLSLQLAQGNTFEFVADEWF 111 >UniRef50_D2LIX3 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LIX3_RHOVA Length = 392 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD K+RT KP +++DADGL + + P G ++ YR GK L +G+YP Sbjct: 1 MALSDLKIRTT--KPTERDFKLSDADGLYLLVRPNGSKLWRLNYRHLGKNKTLAIGKYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 ++L AR A+ R+L G DP Sbjct: 59 IALSTARDKRAEARRLLAEGVDP 81 >UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria RepID=B2I529_XYLF2 Length = 410 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 5/108 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT L+ + KP VAD GLSV + P G I +++RYR G+ +L LG+YP+ Sbjct: 1 MPLTDTALKAL--KPRDRIYSVADERGLSVEVYPTGGIVWRFRYRLAGRYEKLTLGKYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDP---RTYFEEKVENSMTVAQCLDYWF 105 LSL++AR + L GT P + + ++MTV + +F Sbjct: 59 LSLRNARLKRDEAASLVAMGTSPARQKQLAKVTAADAMTVRDFAERFF 106 >UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomonas RepID=A5W5R9_PSEP1 Length = 393 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 3/93 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT R KP +AD+ GL++ ++ GV + +R+ W GK R+ LG YP Sbjct: 1 MALTDTAARQ--AKPREKGYTLADSLGLTLYVAETGVKSWHFRFTWLGKQARISLGTYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPR-TYFEEKVE 92 + LK+AR + R+ G DPR + E+KVE Sbjct: 59 IGLKEARARRDEAREDVAQGKDPRESRREKKVE 91 >UniRef50_UPI00016954D2 DNA integration/recombination/inversion protein n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=UPI00016954D2 Length = 252 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D +R +P S P + D GL + I+P G ++++YR+ GK RL LG YP Sbjct: 1 MPLNDLLIRK--AQPASKPVRLFDGGGLYLEIAPSGGKLWRWKYRFAGKEKRLALGPYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL +AR+ A+ R++ SG DP Sbjct: 59 ISLAEARKRHAESRQVLKSGIDP 81 >UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP99_HAHCH Length = 416 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 11/111 (9%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPK-GVIQ----FQYRYRWHGKPNRLGLGR 57 +SDTK+R + + ++D +GLS+RI PK G I F+YR KP +L LG Sbjct: 4 LSDTKIRNAKTETDTC---LSDGNGLSLRIYPKRGKIARTWVFRYRRPATKKPAKLSLGD 60 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPR-TYFEEKVE--NSMTVAQCLDYWF 105 YP +SL+ ARQ +R+ F G DP+ E++ E N++T Q + W Sbjct: 61 YPVISLRAARQQAEIMRQQLFEGLDPQYVQKEQRAENANAITTQQLFESWL 111 >UniRef50_A5EQ25 P4-like integrase n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EQ25_BRASB Length = 407 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 7/113 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DTK R G+ S ++++D GL + I+P G ++ YRWHGK L LG YP+ Sbjct: 1 MPLTDTKCRNAKGQIKS--RKLSDGGGLHLLITPDGAKYWRLAYRWHGKQRTLALGVYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWFDNY 108 + L +AR D ++ + DP E K+ T W +N+ Sbjct: 59 VGLIEARASRDDAKRSIAADIDPSIVKRERKRAAKIATGNTFEAVAREWHENW 111 >UniRef50_B0TQV5 Integrase family protein n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TQV5_SHEHH Length = 358 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 6/81 (7%) Query: 40 FQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQ 99 FQYRYR+ GK R LG YP+LSL DAR +L+ + SG D ++ + TV + Sbjct: 2 FQYRYRFEGKGRRYDLGSYPNLSLSDARACVPELKGITESGMDVKSVKASQKVGKKTVLK 61 Query: 100 -----CLDYWFDNYVSTTLRE 115 C+D + D YV T+LRE Sbjct: 62 PKLEDCMDLFLDKYV-TSLRE 81 >UniRef50_Q2T016 Site-specific recombinase, phage integrase family n=30 Tax=Bacteria RepID=Q2T016_BURTA Length = 438 Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 5/107 (4%) Query: 6 TKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKD 65 T L+ KP P +AD GL +++ P G ++ +YR+ GK G YP +SL Sbjct: 49 TDLKVRRAKPAEQPYRLADGKGLYLQVMPNGSRYWRMKYRFDGKEKLASFGVYPEVSLAQ 108 Query: 66 ARQITADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWFDN 107 ARQ RKL +GTDP E +E S + WF++ Sbjct: 109 ARQACLAARKLLAAGTDPTEQKREIKRARAIEASSSFEAVAREWFES 155 >UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MJ08_9PROT Length = 418 Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT ++ KP + P +AD G+ + + P G ++ YR+ K L LG YP Sbjct: 1 MKLTDTAIKK--AKPQAKPYRIADGGGMYIEVKPNGAKYWRMAYRFADKQKTLALGVYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 ++L DAR + RKL +G DP Sbjct: 59 VTLADARDRRNEARKLLANGADP 81 >UniRef50_A9MQQ9 Putative uncharacterized protein n=9 Tax=Salmonella enterica RepID=A9MQQ9_SALAR Length = 247 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 13/124 (10%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D+K+R+ K ++ D+ GL + +S G + +RYR+ GK NRL G YP Sbjct: 1 MALNDSKIRS--AKTLDKSYKLTDSQGLYLTVSTSGAKLWYFRYRFDGKENRLAFGAYPL 58 Query: 61 LSLKDARQITADLRKLYFSGTDP---RTYFEEKVENSMTV--------AQCLDYWFDNYV 109 ++L +AR+ RKL SG P R + V+ S T CL W + + Sbjct: 59 VTLAEAREKRDAARKLLASGICPSQLRKTNDASVDESRTFKFIATAWHTSCLKLWSEGHA 118 Query: 110 STTL 113 L Sbjct: 119 DKIL 122 >UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella RepID=A5I9N5_LEGPC Length = 407 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 3/112 (2%) Query: 4 SDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSL 63 +DT +R + K E + G +RI+P V + YRY+ +G + LG YP++SL Sbjct: 5 TDTYIRNLKAK--EKRYEEFEGGGFGIRITPNNVKTWIYRYKINGVTTKFTLGHYPAMSL 62 Query: 64 KDARQITADLRKLYFSGTDPRTYFEEKVE-NSMTVAQCLDYWFDNYVSTTLR 114 +A++ +L ++ G DP+T + + E ++ TV + W+ NY+ ++ Sbjct: 63 SNAKRRFLELSQMRREGVDPKTVIQAQEEQDNNTVDKLALNWYTNYIEKHVK 114 >UniRef50_B6WV41 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV41_9DELT Length = 401 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DT +RT KP P ++AD+ GL V ++P G ++ +YR+ GK +G YP++S Sbjct: 5 LTDTAIRT--AKPKEKPYKMADSGGLYVLVNPGGGKLWRLKYRFEGKERLFAIGTYPAVS 62 Query: 63 LKDARQITADLRKLYFSGTDP 83 LK+AR +++ G DP Sbjct: 63 LKEARARAVTAKEMIARGVDP 83 >UniRef50_Q8EJS4 Site-specific recombinase, phage integrase family n=2 Tax=Gammaproteobacteria RepID=Q8EJS4_SHEON Length = 429 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 11/119 (9%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISP----KGV-IQFQYRYRWHGK--PNR-LG 54 +++T L ++ KP P ++D+ GL+ R +P KG + + +RYR G+ P R + Sbjct: 7 MTNTALVSLTNKPLDKPTTLSDSGGLAARATPAKDGKGNNVLWIFRYRMGGRETPQRTIV 66 Query: 55 LGRYPSLSLKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWFDNYVS 110 G+YP L L AR+ + G DP+T E K +TVA+ LD W Y + Sbjct: 67 FGKYPDLKLAGAREKRERCKVWIADGKDPKTQLELELSKAVKPLTVAEVLDNWISEYAN 125 >UniRef50_A6QCY9 Site-specific recombinase, phage integrase family n=2 Tax=Proteobacteria RepID=A6QCY9_SULNB Length = 409 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 44/80 (55%) Query: 13 GKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITAD 72 KP ++ D GL + I+PKG ++ +YR+ GK R+ LG YP+ SL+DARQ D Sbjct: 16 AKPKEKEYKLFDGGGLYLSITPKGQKWWRLKYRFDGKEKRISLGVYPNTSLQDARQQRED 75 Query: 73 LRKLYFSGTDPRTYFEEKVE 92 + G DP +EK E Sbjct: 76 FKTQIAKGIDPSRERKEKKE 95 >UniRef50_B0RRY6 Complete genome, strain B100 n=3 Tax=Proteobacteria RepID=B0RRY6_XANCB Length = 409 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 4/85 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRY 58 M ++DT +R KP + PQ++ D +GL + + P G ++Y YR GK N L G Y Sbjct: 1 MPLTDTAIR--RAKPAATPQKLRDGNGLYLLLRPDGARWWRYDYRRPVTGKRNTLSFGTY 58 Query: 59 PSLSLKDARQITADLRKLYFSGTDP 83 P +SL DAR+ A+ R+L + DP Sbjct: 59 PEVSLADARERLAEARRLVAAKIDP 83 >UniRef50_UPI0001AF6377 prophage PSPPH01, site-specific recombinase phage integrase family protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF6377 Length = 393 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++ K+R + KP P ++ D+ GL + ++P G ++YR+R GK N +G YP Sbjct: 1 MPLTAVKIR--HAKPGPAPIKLTDSGGLFLEVTPGGNKLWRYRFRLAGKENTYAIGSYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV------ENSMTVAQCLDYWFDNYVST 111 LSL DAR R+L G +P + + V ENS T + W + ++ Sbjct: 59 LSLSDARAERDAARELVKLGRNP-AHVRQTVKAQQLSENSNTFKVVAEEWIEKRLAN 114 >UniRef50_B5WB94 Integrase n=1 Tax=Burkholderia sp. H160 RepID=B5WB94_9BURK Length = 295 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 10/103 (9%) Query: 13 GKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITAD 72 KP S P ++ D D + +R+S G +++ YR GK LGR+P++S+ DARQ+ Sbjct: 11 AKPRSKPYKLRDRDSMYLRVSVSGSKVWKFDYRLDGKDCSYTLGRFPNVSIADARQLRNA 70 Query: 73 LRKLYFSGTDPRTYFEEKVENSMTVAQ--------CLDYWFDN 107 KL SG P+ Y EK TVA C ++ DN Sbjct: 71 AAKLVASGIHPKAY--EKQLQQQTVAHQKNTLWPVCEEWLEDN 111 >UniRef50_C6E138 Integrase family protein n=1 Tax=Geobacter sp. M21 RepID=C6E138_GEOSM Length = 433 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 + +DT +R + KP + ++ +G ++R+ P G + Y Y +GK +GLG YP Sbjct: 6 IVFTDTMIRKL--KPDTNEYRKSEGNGFTIRVMPSGFKSWLYLYAINGKRRCMGLGHYPD 63 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWFDNYVSTTLRE 115 ++L+ AR +K+ +G DP EE+ E ++TV Q D + + RE Sbjct: 64 VTLETARDRFEAAKKMVKNGMDPLDAKEEEQEQHRKALTVKQLFDDYLVRHAKLNKRE 121 >UniRef50_A1WLK0 Phage integrase family protein n=4 Tax=Burkholderiales RepID=A1WLK0_VEREI Length = 421 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 39/62 (62%) Query: 22 VADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGT 81 ++DA GL + +SP G ++ ++YR+ G+ RL LG YP + LKDAR D RK + G Sbjct: 21 LSDAAGLYLEVSPSGSKRWFWKYRFDGREKRLALGVYPDVPLKDARTARDDARKQHQRGV 80 Query: 82 DP 83 DP Sbjct: 81 DP 82 >UniRef50_A6F4S5 Putative integrase n=1 Tax=Marinobacter algicola DG893 RepID=A6F4S5_9ALTE Length = 437 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 7/108 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 I+DTK R K + +AD+ GL++ I P G ++YRYR HGK +G YP+++ Sbjct: 2 ITDTKARKAKAKDTT--YRLADSGGLALEIRPSGSKFWRYRYRLHGKAGMYTVGEYPTIT 59 Query: 63 LKDARQITADLRKLYFSGTDP-----RTYFEEKVENSMTVAQCLDYWF 105 + +AR I +K +G P R E + E + T+ + W Sbjct: 60 ISEARAIRDWAKKCVANGEAPAEVKKRELAERRAEQANTLEEVGKEWI 107 >UniRef50_A1ANR7 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ANR7_PELPD Length = 453 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 3/87 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +DT +R + KP +V + DG VR+ P G+ F + Y GK ++ LG YP+ Sbjct: 1 MKFTDTGIRNL--KPKEKMYQVREGDGFGVRVLPSGLRIFVFIYTIAGKRRQMNLGDYPA 58 Query: 61 LSLKDARQITADLRK-LYFSGTDPRTY 86 +SL +AR+ AD RK L TDP+ + Sbjct: 59 VSLSEARERAADARKVLSRERTDPQEH 85 >UniRef50_Q0AH02 Phage integrase family protein n=2 Tax=Nitrosomonas eutropha C91 RepID=Q0AH02_NITEC Length = 393 Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 17/128 (13%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D+ +R KP ++ D +GL++ I P G ++YRY ++ K + L LG+YP Sbjct: 1 MKLTDSAIRA--AKPKEKQYKLTDGNGLTLLIYPDGSKHWRYRYLFNEKESMLSLGKYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEK-------VENSMTVAQCLDYWF-------D 106 +L AR I + + G +P T+ +E+ VENS A +W + Sbjct: 59 TTLAQARSIHDGYKAILKQGINPSTHRKEEKRKAIVSVENSFE-AVARTWWMHWKHAKTE 117 Query: 107 NYVSTTLR 114 +V+ TLR Sbjct: 118 RHVAYTLR 125 >UniRef50_B4W813 Site-specific recombinase, phage integrase family protein n=2 Tax=Brevundimonas RepID=B4W813_9CAUL Length = 525 Score = 55.5 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 20 QEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLG-LGRYPSLSLKDARQITADLRKLYF 78 + V+ A GLSVR+ P G+ QF+ RY G P R LG YP++SL DAR+ LR Sbjct: 24 RRVSGARGLSVRVWPSGLTQFEVRYAVGGGPRRRTILGDYPAVSLADAREKATALRLDVL 83 Query: 79 SGTDP 83 G DP Sbjct: 84 KGVDP 88 >UniRef50_Q0C1T8 Site-specific recombinase, phage integrase family n=2 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C1T8_HYPNA Length = 409 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D K+R++ KP P+ D L + + P G +++ Y++ GK + LG YP Sbjct: 15 MPLTDLKIRSL--KPDGKPRRYTDGGNLFIEVRPNGSKLWRFAYKFDGKQKLMALGTYPE 72 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL AR+ A+ R L G DP Sbjct: 73 ISLARAREKRAEARALLIEGIDP 95 >UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IGA6_BORPD Length = 657 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 11/114 (9%) Query: 1 MAISDTKLRT--IYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRY 58 MA+SD +R GK Y+ + D D LS+ +S G + +RY W GK R+ LG Y Sbjct: 15 MALSDLIVRQAKTTGKRYT----LYDNDCLSLMVSAAGGKSWMFRYSWLGKQKRMALGGY 70 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWFDN 107 P+LSL++AR + L G DP+ ++ K+ T D W ++ Sbjct: 71 PALSLREARAERDKAQALIARGIDPQIERDQRRHAAKLAGEYTFKNVFDAWVEH 124 >UniRef50_Q8VQN9 CP4-like integrase n=87 Tax=Enterobacteriaceae RepID=Q8VQN9_ECOLX Length = 421 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K+R KP ++ D G+ + + P G ++ RYR GK L LG YP Sbjct: 1 MALTDAKIRA--AKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL +AR + RKL G DP Sbjct: 59 VSLSEARTKRDEARKLISEGIDP 81 >UniRef50_C0N6F7 Site-specific recombinase, phage integrase family protein n=2 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6F7_9GAMM Length = 401 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 42/65 (64%) Query: 19 PQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYF 78 P +V+D+ GL + + KG +++Y++ + G +L LG YP +SLK+ARQ D+RK Sbjct: 25 PYKVSDSHGLYIEVPLKGSKRWRYKFYFEGTERKLSLGTYPKISLKEARQKRDDIRKKID 84 Query: 79 SGTDP 83 +G DP Sbjct: 85 AGIDP 89 >UniRef50_Q0BEM8 Phage integrase family protein n=4 Tax=Burkholderia ambifaria RepID=Q0BEM8_BURCM Length = 414 Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 7/116 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D K+R K + P ++ D +GL + + P G ++Y+YR GK N +G YP+ Sbjct: 1 MPLTDIKIRQ--AKAGNKPTKLTDGNGLYLLVKPSGSKLWRYKYRIAGKENVFAIGEYPT 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVST 111 SL+ AR D R+L G P +E + E T D W + T Sbjct: 59 TSLQAARVARDDARELVKKGLHPSHARQEVLSARINEGKATFRAVSDEWLEKKRKT 114 >UniRef50_C1M393 Bacteriophage integrase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M393_9ENTR Length = 420 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 11/106 (10%) Query: 19 PQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYF 78 P +AD+ GL + IS G + +R+R++GK NR+ G YP +++ DAR+ RKL Sbjct: 17 PYRLADSLGLYLVISNSGSRLWYFRFRFNGKQNRIAFGPYPQITIADARRKRDAARKLLT 76 Query: 79 SGTDPRTYFE-EKVENSMT----------VAQCLDYWFDNYVSTTL 113 SG P + + EK +S T + CL+ W + + + L Sbjct: 77 SGISPSEHRKSEKAASSKTRTFQHIALAWHSSCLNRWSEGHANKIL 122 >UniRef50_A6Q4N1 Site-specific recombinase, phage integrase family n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q4N1_NITSB Length = 412 Score = 54.7 bits (130), Expect = 8e-07, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 2/88 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D +LR KP ++ D +GL + I P G F+ Y + GK N +G YP +S Sbjct: 8 LNDLQLRN--AKPKEKNYKLRDGEGLYILIKPNGRKIFRLDYVYAGKRNTYTIGDYPQIS 65 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEK 90 L AR+I ++++L +G DP Y +E+ Sbjct: 66 LAQARKIKYEVKELIKNGIDPNRYKQEQ 93 >UniRef50_A4F5J8 Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=A4F5J8_9BACT Length = 390 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 4/108 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D ++ + KP +VAD DGL + ++P G + F++ YR++ + + LG+Y Sbjct: 1 MALTDKAIKAL--KPGEKTYKVADRDGLYLSVAPSGTMSFRFNYRYNNRQQTVTLGKYGE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNY 108 ++L AR+ + +G P +E ++N++ W D Y Sbjct: 59 ITLAQAREKLLKAKADLAAGISPAKKKQE-IKNTL-AENSFSVWLDKY 104 >UniRef50_B5F8X4 Integrase n=1 Tax=Salmonella enterica subsp. enterica serovar Agona str. SL483 RepID=B5F8X4_SALA4 Length = 120 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K+R + K P +V D+ GL + + P G + RYR+ GK R+ G YP+ Sbjct: 1 MALTDPKIRAL--KSLDKPYKVIDSGGLYILVKPGGAKHWYLRYRFGGKETRIAFGVYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 ++L AR+ ++R++ P Sbjct: 59 VTLAAAREKREEVRRMLAENVHP 81 >UniRef50_B6B4D0 Integrase n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B4D0_9RHOB Length = 113 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D++LR + KP Q++ D GL+ + P G + + YRW+GK + G YP S Sbjct: 4 LNDSQLRKL--KPTEKTQKIGDGLGLTFVLKPNGSRYWHFNYRWYGKQRTISFGTYPETS 61 Query: 63 LKDARQITADLRKLYFSGTDP 83 LK AR + R+ DP Sbjct: 62 LKSARDQRTEAREFLAQKIDP 82 >UniRef50_UPI0000E0FEDC DNA integration/recombination/inversion protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FEDC Length = 418 Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT ++ KP + +++D+ GL + I P G ++Y +R + +G+YP Sbjct: 1 MALTDTAIKN--AKPKTKAYKMSDSGGLFLLIKPSGYKSWKYDFRINSTRGSYTIGKYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVS 110 +SLK ARQ R+L G +P+ ++ N + Y+ + +++ Sbjct: 59 ISLKQARQEHLQARELVAQGINPKQIKTQRKVNDELQTKRFSYYMNQWLN 108 >UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepID=C9NQJ4_9VIBR Length = 415 Score = 54.3 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 9/111 (8%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNR--LGLGRYPS 60 ++ TK+++ KP + D DGL +RI P G + Y R L LG+YP Sbjct: 8 LTPTKIKS--SKPKDKEYNLFDGDGLRLRIKPNGSKHWILNYYRPSNRKRANLSLGKYPD 65 Query: 61 LSLKDARQITADLRKLYFSGTDP-----RTYFEEKVENSMTVAQCLDYWFD 106 LSL +AR++T + ++L G DP R E+K + T WF+ Sbjct: 66 LSLANARKMTLEAKELLAQGIDPQEERKRHQLEQKANHEHTFINVTTKWFE 116 >UniRef50_Q3JN19 Prophage CP4-like integrase n=62 Tax=Proteobacteria RepID=Q3JN19_BURP1 Length = 462 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD +R KP P ++ D DG+ + + P G ++ YR+ GK L LG YP Sbjct: 58 MNLSDLAVRN--AKPQDKPYKLTDGDGMFLLVQPNGGKYWRLAYRYLGKQKTLALGVYPE 115 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL ARQ A+ R+ G DP Sbjct: 116 VSLALARQRRAEAREQLAKGADP 138 >UniRef50_C3K287 Putative phage integrase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K287_PSEFS Length = 401 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M + DT R KP P + D GL + + P G ++ +YR+ GK RL LG YP Sbjct: 1 MPLKDTNCRN--AKPQDKPYRLYDEQGLYLEVQPNGGRYWRLKYRFLGKEKRLALGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 + L++AR+ D R SG DP Sbjct: 59 VGLQEARRKRDDARVQLASGQDP 81 >UniRef50_A1SXI0 Phage integrase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SXI0_PSYIN Length = 216 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%) Query: 15 PYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYPSLSLKDARQITAD 72 P + D +GL + + PKG ++Y Y + K LGLG YP+++L+ AR + + Sbjct: 28 PKEKEYNLGDGNGLYLYVRPKGTKSWKYNYTHPYTKKRANLGLGVYPNVTLEQARMVRDE 87 Query: 73 LRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 L + DP+ + + K++ V Q Y FDN V+ L+ Sbjct: 88 FNSLLANNIDPKKHRDAKIKEETEVNQ---YLFDNVVNDWLK 126 >UniRef50_Q31FR8 Tyrosine recombinase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FR8_THICR Length = 396 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 6/84 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYPS 60 +SD ++R + + ++D GLS+ I PK +F++RY+ + K N L LG YPS Sbjct: 5 LSDVQIRKAV---HPSTKSLSDGKGLSIEIMPKAK-RFKFRYQRPVNKKINNLVLGYYPS 60 Query: 61 LSLKDARQITADLRKLYFSGTDPR 84 +SLK AR+I R+L G DP+ Sbjct: 61 MSLKAAREIAQQYRELLKKGIDPK 84 >UniRef50_Q167M4 CP4-like integrase, putative n=40 Tax=Alphaproteobacteria RepID=Q167M4_ROSDO Length = 409 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 5/93 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD K+R + K +VAD D L V + P G +Q +YR G+ L +G YP+ Sbjct: 15 MPLSDAKIRNL--KARDKQYKVADFDSLYVLVKPNGSKLWQMKYRLDGREKTLSIGAYPA 72 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN 93 +SL+ AR+ R + +G DP EEK E Sbjct: 73 VSLQQARKSRDAARSMIANGEDPS---EEKQEQ 102 >UniRef50_Q1QA94 Phage integrase n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QA94_PSYCK Length = 413 Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 43/72 (59%) Query: 19 PQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYF 78 P + +D +GL + + GV + YRW GK L +G YP +SL++ARQ ++++L Sbjct: 23 PDKHSDGNGLQLWVRYTGVKSWISAYRWQGKQQTLTIGTYPVMSLQNARQRNIEIKRLIA 82 Query: 79 SGTDPRTYFEEK 90 G +P+ + +E+ Sbjct: 83 DGVNPKDHKKEQ 94 >UniRef50_C6N3S0 Putative phage integrase family protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N3S0_9GAMM Length = 397 Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 6/112 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISP-KGVIQ--FQYRYRWHGKPNRLGLGRYP 59 +SD+ +R++ + D DGL + + P K ++ F +R++W KP + +G Y Sbjct: 2 LSDSLIRSL---KLGDKKRHTDRDGLVLELRPSKKQLKKIFIFRFQWDKKPQTITIGDYR 58 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVST 111 S+ L AR I R + SG DPR+ E + +T D WF Y T Sbjct: 59 SVGLGAARDIALAYRNMVNSGIDPRSKNVEADQEKITFEVVADQWFQKYKGT 110 >UniRef50_Q5P707 Phage-related integrase n=2 Tax=Proteobacteria RepID=Q5P707_AZOSE Length = 415 Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D K R + K VAD+ GL + + P G ++YR+R K N LG YP++ Sbjct: 2 LTDAKCRAV--KATDKTYRVADSHGLCLEVRPSGAKFWRYRFRLADKQNMHALGEYPAMG 59 Query: 63 LKDARQITADLRKLYFSGTDP 83 L+DAR+ + R+L G +P Sbjct: 60 LQDARRARDEARELVRKGINP 80 >UniRef50_A7MWW9 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7MWW9_VIBHB Length = 410 Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 7/92 (7%) Query: 22 VADADGLSVRISPKGVIQ--FQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFS 79 + D DGL +RI P G F Y + K +GLG+YP +SL AR+ +R+L Sbjct: 25 IGDGDGLLLRIMPNGTKSWLFNYIHPSTKKRKNIGLGKYPDVSLATAREQRQTMRELVAK 84 Query: 80 GTDPRTYFE-----EKVENSMTVAQCLDYWFD 106 G DP+T+ + EK+ T+ WF+ Sbjct: 85 GIDPKTHRDNQQTAEKLAAQDTLLHVAKEWFE 116 >UniRef50_A5PCI3 Phage integrase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCI3_9SPHN Length = 325 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+S ++ K P ++AD DGL + +SP G ++ YR+ GK L GR+P+ Sbjct: 1 MALSAVAIKA--AKSRDKPYKLADRDGLYLEVSPTGARSWRMNYRYLGKQKTLTFGRWPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 + L DAR+ R++ G DP Sbjct: 59 VGLADARKKCDAAREVLARGDDP 81 >UniRef50_Q48NQ4 Prophage PSPPH01, site-specific recombinase, phage integrase family n=2 Tax=Pseudomonas RepID=Q48NQ4_PSE14 Length = 391 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K+R KP ++ D+ GL + ++ G ++YR+R GK N +G YP Sbjct: 1 MALTDLKIRQ--AKPGKTSSKLTDSGGLYLEVTTGGSKLWRYRFRLAGKENTYAIGAYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL DAR R L SG +P Sbjct: 59 VSLSDARTERDAARDLVKSGRNP 81 >UniRef50_Q6AR70 Probable prophage integrase n=1 Tax=Desulfotalea psychrophila RepID=Q6AR70_DESPS Length = 399 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 41/76 (53%) Query: 8 LRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDAR 67 L+ + + P ++D GLS ++ GV ++ YRYR K LGRYP LSL+ AR Sbjct: 4 LKALQVRNAKDPCRLSDGLGLSFEVTKSGVKRWLYRYRLDDKQQMCVLGRYPELSLEQAR 63 Query: 68 QITADLRKLYFSGTDP 83 +I + R L G +P Sbjct: 64 KIHREARALVREGCNP 79 >UniRef50_A5V414 Phage integrase family protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V414_SPHWW Length = 417 Score = 53.1 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 43/78 (55%) Query: 6 TKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKD 65 T ++ K +G +++D GL++ + P G ++ +YR+ GK L LG +P + + + Sbjct: 4 THIQIAAAKASNGALKLSDGRGLTLVVQPSGSKVWRLKYRYEGKQKTLHLGHWPKVGISE 63 Query: 66 ARQITADLRKLYFSGTDP 83 AR D RKL GTDP Sbjct: 64 ARIRREDARKLIEEGTDP 81 >UniRef50_C8QZM9 Integrase family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZM9_9DELT Length = 409 Score = 53.1 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 2/92 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M S+ K+R + +P S + +A+G SVRI P G + + Y + GK + LG YP+ Sbjct: 1 MKFSEAKIRNL--RPQSKKYYLREANGFSVRIMPSGAKTWLFIYTFDGKRKEMNLGHYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE 92 ++L+ AR+ L+ G DP EK E Sbjct: 59 VTLEAARRKYRAAFDLFEQGNDPVAMHLEKKE 90 >UniRef50_A5EXV7 Integrase A2 n=6 Tax=Cardiobacteriaceae RepID=A5EXV7_DICNV Length = 401 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D ++T KP G + D DGLS++I+ +G + +RY +G+ + LGRYP+ Sbjct: 10 MRLTDKIIQTA-KKPSRGYLRLTDGDGLSLKITDRGSYFWNFRYYINGRERNMSLGRYPA 68 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +S++ AR +LR G DP Sbjct: 69 MSIEAARGEALELRYHLRQGLDP 91 >UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EVM1_ECOLX Length = 396 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 7/111 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRY--PS 60 ++DT+LR + KP +V D DGL V ++P G I F+Y Y +G+ + GRY Sbjct: 2 LTDTRLRHL--KPKEKLYKVNDRDGLYVAVTPAGTISFRYNYSINGRQETVTFGRYGVGG 59 Query: 61 LSLKDARQITADLRKLYFSGTDP---RTYFEEKVENSMTVAQCLDYWFDNY 108 ++L +AR+ + +K+ SG P + + +++++ T + W Y Sbjct: 60 ITLAEARERLNEAKKMVASGRSPAREKARDKARIKDAETFGAWAEKWLRGY 110 >UniRef50_UPI00016B0CE6 putative integrase n=1 Tax=Burkholderia pseudomallei NCTC 13177 RepID=UPI00016B0CE6 Length = 162 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 2/90 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT ++ + KP P+++ D GL + ++P ++ +YR+ GK L G YP Sbjct: 1 MALTDTAIK--HAKPAEKPRKLFDGSGLYLLLTPDQGKYWRLKYRFGGKEKSLSFGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEK 90 ++L AR + + R L G DP +E+ Sbjct: 59 VTLAAARNLRDEARALLAEGVDPSEVRKEE 88 >UniRef50_C7I2C4 Putative integrase n=1 Tax=Thiomonas intermedia K12 RepID=C7I2C4_THIIN Length = 229 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT +R KP + ++ D GL + I+P G ++ +Y + GK RL G YP Sbjct: 1 MPLTDTTIRN--AKPGAKSIKLFDERGLYLEITPPGGKLWRLKYSFGGKEKRLSFGAYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SLK AR+ D R++ G DP Sbjct: 59 VSLKAAREKRDDARRMLADGIDP 81 >UniRef50_A0YFV5 Integrase, phage related protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFV5_9GAMM Length = 325 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 5/108 (4%) Query: 4 SDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSL 63 +DT +R++ KP + E+++ GL +R+S G + Y YR + + RL +GRYP++SL Sbjct: 7 TDTYIRSL--KPKAERYEISEPGGLRLRVSSSGKKSWVYVYRQNKRLRRLTIGRYPNISL 64 Query: 64 KDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWFDNY 108 AR A R G DP + K + + TV Q + + + + Sbjct: 65 SAARVEIAKARLTREKGIDPAIEAQLKTQKRLHAPTVEQLISLYIEQH 112 >UniRef50_D0SUB2 Predicted protein n=2 Tax=Acinetobacter RepID=D0SUB2_ACILW Length = 396 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 15/114 (13%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT+ R +P ++D GLS+ I+ KG + R HG+ LG YP Sbjct: 17 MPLTDTECRK--AQPKDKQYRLSDLHGLSLIITTKGQKYWNVRVTVHGERKSESLGPYPD 74 Query: 61 LSLKDARQITADLRKLYFSGT---DPRTYFEEKVENSMTVAQCLDYWFDNYVST 111 LSLK AR++ +L+ Y D + YFEE E+ WF+N T Sbjct: 75 LSLKKARELAYELKHRYSRSVLHEDLKPYFEEVAED----------WFNNQKET 118 >UniRef50_C6RPH9 Site-specific recombinase, phage integrase family n=2 Tax=Acinetobacter radioresistens RepID=C6RPH9_ACIRA Length = 159 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 17/100 (17%) Query: 19 PQE----VADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLR 74 PQE ++D +GLS+R+ P G + RY +G+ LG YP LSLK AR+I DLR Sbjct: 18 PQEKQYRLSDINGLSLRVDPNGKKYWSIRYTENGQRKSKALGIYPELSLKRAREIAFDLR 77 Query: 75 KLYFSGTD---PRTYFEEKVENSMTVAQCLDYWFDNYVST 111 + T+ + YF+E E+ WF+N T Sbjct: 78 YKLKNTTEVEQEQPYFKEVAED----------WFNNQKET 107 >UniRef50_A3M8S0 Putative integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M8S0_ACIBT Length = 433 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPS 60 ++DTK ++ KP AD GL +R+ P G + +RY R + K ++ LG YP+ Sbjct: 8 LTDTKCASL--KPKDKEYVEADGGGLYLRVRPTGAKSWIFRYTNRGNDKREKITLGPYPA 65 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWFDNYV 109 LSL AR+ + ++ G DP+ K N T+ + W D Y Sbjct: 66 LSLAKAREKKHEFLRMIAEGVDPKEQLSILLAKKNNVNTLENVVRVWLDAYA 117 >UniRef50_D0SJJ0 Phage integrase n=6 Tax=Acinetobacter RepID=D0SJJ0_ACIJU Length = 406 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SDTK++ + KP + DA+ L + + P G ++ +Y H K + LG YPS+S Sbjct: 2 LSDTKIKNL--KPQEKMYRILDAERLYIEVRPTGKKVWRLKYTLHSKEGTISLGEYPSVS 59 Query: 63 LKDARQITADLRKLYFSGTDP 83 L +AR+ +++ L G +P Sbjct: 60 LAEARKKKEEIKVLLKDGINP 80 >UniRef50_C0VMW7 Phage integrase n=2 Tax=Acinetobacter RepID=C0VMW7_9GAMM Length = 419 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD ++R I KP + AD GL + ++P G ++ +YR++G+ + L +G YP +S Sbjct: 22 LSDAQVRKI--KPLEKKKRYADEKGLYLEVTPSGGRFWRLKYRFNGRESTLTIGSYPEIS 79 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENS 94 L AR+ + R +S DP ++++ + Sbjct: 80 LAQARRARDEARIQLYSNIDPNAVKNQRLQQT 111 >UniRef50_B0VTB2 Putative prophage integrase n=1 Tax=Acinetobacter baumannii SDF RepID=B0VTB2_ACIBS Length = 388 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 12/103 (11%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD +++++ KP VAD +GL++ + P G ++ YR +GK N+ LG YP + Sbjct: 2 LSDAQVKSL--KPKESRYSVADGEGLNISVFPNGKKKWVLSYRQNGKQNQKMLGEYPVMG 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWF 105 K+AR + A KL + G KV NS V + ++ W Sbjct: 60 CKEAR-LQARQLKLEYQG---------KVANSPPVHKVIEEWL 92 >UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IRV8_BORPD Length = 402 Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 A+SD ++ +P P ++AD GL + + P G ++Y++R GK +GRYP + Sbjct: 9 ALSDRAVKN--ARPKDAPYKLADGGGLHLLVQPNGSRLWRYKFRLGGKEQVFAIGRYPDV 66 Query: 62 SLKDARQITADLRKLYFSGTDP 83 L +AR+ R+L G P Sbjct: 67 GLAEARERHLAARRLVADGVSP 88 >UniRef50_A6SWC6 Prophage integrase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWC6_JANMA Length = 414 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKG--VIQFQYRYRWHGKPNRLGLGRY 58 +A T LR KP P ++AD +G+ + I P G V + YR RL G Y Sbjct: 4 LATPLTDLRIKAAKPKEKPYQLADGEGMYLEILPSGSKVWRMAYRQENRTTSTRLTFGHY 63 Query: 59 PSLSLKDARQITADLRKLYFSGTDP 83 P++ L +AR+ AD +K G DP Sbjct: 64 PAVGLAEARRKRADTKKQIVEGVDP 88 >UniRef50_A6VC70 Integrase n=11 Tax=Proteobacteria RepID=A6VC70_PSEA7 Length = 395 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D R KP + D GL + + P GV ++YR++ GK + LG YPS+S Sbjct: 2 LTDAHCRA--AKPKEQLYRLNDFRGLYLEVKPNGVKAWRYRFKLAGKGSWFALGDYPSVS 59 Query: 63 LKDARQITADLRKLYFSGTDP 83 L DAR + RKL G +P Sbjct: 60 LADARDKCEEARKLVKQGINP 80 >UniRef50_D0W4G5 Site-specific recombinase, phage integrase family n=4 Tax=Neisseria RepID=D0W4G5_NEICI Length = 428 Score = 51.2 bits (121), Expect = 9e-06, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 15/127 (11%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D ++R KP P ++ D GL + I+ G +++ + +GK L +G+YP+ Sbjct: 24 MKLNDRQIRN--AKPAEKPYKLNDGKGLYLYINTSGGKLWRFDFACNGKRKTLSIGKYPT 81 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVA-------------QCLDYWFDN 107 +SL +AR+ R++ +G DP +++ E A L W +N Sbjct: 82 VSLAEARETAETARRMLAAGQDPSEAKQQEKEERKAAALNTFESIARRWHTDNLTRWKEN 141 Query: 108 YVSTTLR 114 + + LR Sbjct: 142 HAARVLR 148 >UniRef50_B5EWV2 Integrase n=2 Tax=Gammaproteobacteria RepID=B5EWV2_SALA4 Length = 102 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT +R I KP ++ D+ GL + I P G + +YR GK +L G YP Sbjct: 1 MALTDTAIRKI--KPTEKSFKITDSAGLYLLIKPNGSKLWYMKYRVDGKEKKLAFGPYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL ARQ+ R G DP Sbjct: 59 VSLFKARQLRDAARARVREGADP 81 >UniRef50_Q72AY5 Integrase, truncation n=1 Tax=Desulfovibrio vulgaris str. Hildenborough RepID=Q72AY5_DESVH Length = 106 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D ++ + +P++ +ADA GL + SP G +++RYR K N L G YP Sbjct: 1 MALTDIQVTAL--QPWTKAYRIADASGLCLEASPNGHKLWRFRYRLQAKANMLVRGVYPQ 58 Query: 61 LSLKDAR 67 +SLK AR Sbjct: 59 VSLKQAR 65 >UniRef50_A8EWJ5 Phage integrase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EWJ5_ARCB4 Length = 410 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 5/99 (5%) Query: 13 GKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITAD 72 KP + D GL + ++P +++RY ++GK + YP +SLK AR+ + Sbjct: 15 AKPTKETYYLFDGLGLYLEVTPNNAKIWKFRYTYNGKRKKTSFQSYPKVSLKQARKKRDN 74 Query: 73 LRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWFD 106 +L F G DP Y++E ++E++ + W + Sbjct: 75 YNELLFDGIDPIEYYKEQKELKQIEDTSSFKNIFTQWLE 113 >UniRef50_A7H0X5 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter curvus 525.92 RepID=A7H0X5_CAMC5 Length = 396 Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 7/105 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPS 60 ++D+K++ + KP +++D D L +++ P G F Y + R G+ R+ LG+YP+ Sbjct: 4 LNDSKIKAL--KPKEKRYKISDGDNLYIQVMPSGTKTFIYEFKSRSSGRYKRISLGQYPA 61 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWF 105 +SL AR+ + +K +G +P + E + + D WF Sbjct: 62 ISLLMAREKRLEFQKALANGDEPMS---EAKQAMTSFEAVFDEWF 103 >UniRef50_D2U0P4 Phage integrase n=1 Tax=Arsenophonus nasoniae RepID=D2U0P4_9ENTR Length = 361 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 6/79 (7%) Query: 37 VIQFQYRYRW---HGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN 93 ++ F + YR + P L LG+YP +SLK AR++ R+ DPR Y + + E Sbjct: 1 MVSFVFFYRLGDRNSSPIWLTLGKYPDMSLKQARKVRNQCREWLVENKDPRIYIKIQKET 60 Query: 94 SM---TVAQCLDYWFDNYV 109 ++ TV L+YW ++YV Sbjct: 61 TLKPVTVKDALEYWIEHYV 79 >UniRef50_D1UTM5 Integrase family protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UTM5_9BURK Length = 425 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 2/87 (2%) Query: 19 PQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYF 78 P D GL+ +S G + R+R GKP L LGRYP L+L AR++ A+ R Sbjct: 23 PLARTDGGGLTFTLSATGTASWILRFRIGGKPEELTLGRYPDLTLSAARKLAAEKRVEVQ 82 Query: 79 SGTDPRT-YFEEKVENSMTVAQCL-DY 103 G +P T ++K + TV Q + DY Sbjct: 83 KGNNPATEKRKDKSRKNWTVRQLVSDY 109 >UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID=B2UB26_RALPJ Length = 415 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 10/116 (8%) Query: 6 TKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKD 65 T R KP P ++ D GL V + P G ++Y+Y GK + +G YP + + D Sbjct: 9 TPTRINNAKPKEQPYKLTDGGGLFVLVHPGGSKAWRYQYMLSGKRRSVLIGSYPEIGVSD 68 Query: 66 ARQITADLRKLYFSGTDPRTY-----FEEKVENSMTVAQCL-----DYWFDNYVST 111 AR A+ R + GTDP + E K + S+ + L W D ++T Sbjct: 69 ARDRHAEYRAMVEQGTDPAEHRRQDKAERKAKESLQEDEGLFKAFSLKWIDERLAT 124 >UniRef50_A3ZAX6 Prophage CP4-like integrase n=2 Tax=Synechococcus RepID=A3ZAX6_9SYNE Length = 426 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 5/114 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD ++ + P + D DGL + ++ G ++ YRW G +G YP++ Sbjct: 2 LSDKAIQALRPDPDRPGTKHHDRDGLYLWVARSGSKTWRKDYRWQGARRTFTIGPYPAVR 61 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVST 111 L DAR+ +L +G DPRT + N S Q WF+++ ++ Sbjct: 62 LADARKQALELNTWIKAGIDPRTQVPTQQRNQAESSSRPFVQIAQAWFEHHSAS 115 >UniRef50_A1AUY6 Phage integrase family protein n=2 Tax=Desulfuromonadales RepID=A1AUY6_PELPD Length = 402 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 4/73 (5%) Query: 15 PYSGPQEVADAD----GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQIT 70 P S +E+ AD GL +R+S G FQ+RYR+ G+ L LG +P++S++DAR Sbjct: 27 PASPSREMEYADIECIGLHLRVSKNGRRFFQHRYRYLGRKMCLSLGEFPAVSVQDARSRV 86 Query: 71 ADLRKLYFSGTDP 83 A+ + L DP Sbjct: 87 AEHKALLARDKDP 99 >UniRef50_P32053 Prophage CP4-57 integrase n=104 Tax=Gammaproteobacteria RepID=INTA_ECOLI Length = 413 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 4/94 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPS 60 ++DT+++ KP ++ D DGL++ I G +Q+RY + + G YP+ Sbjct: 8 LTDTEIKA--AKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYPA 65 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS 94 +SL DAR++ A+ + L DP+ + +E+V NS Sbjct: 66 VSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNS 99 >UniRef50_B9NUX0 Site-specific recombinase, phage integrase family n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NUX0_9RHOB Length = 404 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D L+ + +P + +DA GL + + P G + YR+ GK + G YP Sbjct: 1 MPLTDIALKNM--QPSGRAYKRSDAHGLYILVKPNGSKHWHLHYRFLGKQKVMSYGPYPL 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEK 90 +SLK+AR+ RK G DP +E+ Sbjct: 59 ISLKEAREKRDRDRKFLIEGIDPMVVKKER 88 >UniRef50_A7MTL4 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7MTL4_VIBHB Length = 128 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 20 QEVADADGLSVRISPKGVIQFQYRY-RWHGKPNRLGLGRYPSLSLKDARQITADLRKLYF 78 Q D GL + + G ++ R+ + G+ + LGLG+YP +SL +AR++ A+ RKL Sbjct: 22 QRFHDGQGLYLSVRKSGTKAWELRFTKPDGRGSNLGLGKYPEVSLLEARKLAAEFRKLRA 81 Query: 79 SGTD-----PRTYFEEKVENSMTVAQCLDYWFDNYVS 110 G D + E K + TV + + W + S Sbjct: 82 QGKDLAVEHKKKKLEVKRQACNTVRKIGELWLETAAS 118 >UniRef50_Q1N9F3 Putative integrase prophage protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9F3_9SPHN Length = 443 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 42/81 (51%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +S T + KP + +AD+ GL + ++ G ++YRYR K L LGRYP + Sbjct: 1 MSLTIVEIKNAKPQASDYRLADSQGLFLHVTSAGGKFWRYRYRIGPKEKTLTLGRYPEMG 60 Query: 63 LKDARQITADLRKLYFSGTDP 83 L AR+ + RKL G DP Sbjct: 61 LVAAREAHHEARKLVSEGKDP 81 >UniRef50_A4SIA1 Phage integrase family protein n=2 Tax=Gammaproteobacteria RepID=A4SIA1_AERS4 Length = 408 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 33/56 (58%) Query: 35 KGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEK 90 +G +F RY WHG+ + +GR+P + L AR+I + ++L G DP+ E+K Sbjct: 48 EGNKKFLMRYLWHGRKRAIAIGRFPDVDLNTAREIATEYKRLLSQGIDPKQLKEDK 103 >UniRef50_D2L516 Integrase family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L516_9DELT Length = 417 Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 10/112 (8%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 + ++D +R K P ++ D GL ++++P G ++++Y + GK L LG++P Sbjct: 6 IPLTDVAIRN--AKAADKPVKMFDGAGLFLQVTPTGGKLWRFKYLFDGKEKLLALGKWPD 63 Query: 61 LSLKDARQITADLRKLYFSGTDP-------RTYFE-EKVENSMTVAQCLDYW 104 + LK ARQ + R L G DP R E + VEN+ T A W Sbjct: 64 VGLKMARQRRDEARALVAQGVDPSEKRKQDRADAEGQAVENANTFAVVARDW 115 >UniRef50_B9Z434 Integrase family protein n=2 Tax=Neisseriaceae RepID=B9Z434_9NEIS Length = 395 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 12/112 (10%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLG---LGR 57 M +SD K+RT KP P ++ D GL + I P G ++YRY W P + G +G Sbjct: 1 MPLSDVKIRT--SKPLDKPYKLQDGKGLYLEIRPTGAKFWRYRY-W-TSPTKDGIYTIGE 56 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRT-----YFEEKVENSMTVAQCLDYW 104 YP +SL +AR +R L G +P + E + T+A + W Sbjct: 57 YPDVSLAEARAERERVRALVKEGKNPTAEKKLDKLRSQKETATTLAVVAEEW 108 >UniRef50_A5G635 Phage integrase family protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G635_GEOUR Length = 437 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 40/70 (57%) Query: 14 KPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADL 73 KP S +V + G ++R+ P GV + Y Y ++GK +L LG YP SL+DA ++ + Sbjct: 27 KPESEMYQVREGRGFAIRVLPTGVKTWYYIYTFNGKRRQLNLGNYPDKSLEDAHKVYLES 86 Query: 74 RKLYFSGTDP 83 L +G DP Sbjct: 87 AALVKNGVDP 96 >UniRef50_B7N6K6 Prophage CP4-57 integrase n=8 Tax=Enterobacteriaceae RepID=B7N6K6_ECOLU Length = 415 Score = 48.9 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 7/107 (6%) Query: 13 GKPYSGPQEVADADGLS--VRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQIT 70 KP S E+ D +GL V+ S + F+Y + K + LG YP ++L AR+ Sbjct: 16 AKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPVVTLAMARETR 75 Query: 71 ADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNYVSTT 112 R+L + G DPR + E++++N T+ + + W T+ Sbjct: 76 TKYRRLLWQGIDPRQHLAGIAEEKRLQNECTLEKVAEQWLKEKKRTS 122 >UniRef50_D2YQV3 Phage integrase family protein n=2 Tax=Vibrio RepID=D2YQV3_VIBMI Length = 402 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%) Query: 27 GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTY 86 GL + ++ +G +F +RY HG + LG YP+L + ARQI D ++ G DP+ Sbjct: 43 GLKMIVNRQGRKRFLFRYTLHGTKKSIQLGEYPALDINTARQIANDHKREIALGNDPKAI 102 Query: 87 FEEK 90 +EK Sbjct: 103 RDEK 106 >UniRef50_D0J426 Phage integrase n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J426_COMTE Length = 416 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 5/112 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D + R P + + +DA GL + +SP G ++ ++YR GK RL LGRYP +S Sbjct: 2 LTDAQCRNAVCSPGAKRERFSDAGGLYLEVSPAGSRRWFWKYRKDGKEGRLALGRYPEVS 61 Query: 63 LKDARQITADLRKLYFSGTDP-RTYFEEKVENSMTVAQCLDY----WFDNYV 109 L AR+ R G DP + EK+ N VA W++ V Sbjct: 62 LTAARKARDAARLQKSEGIDPAKARKLEKLVNPTGVADTFKAVALEWYEKQV 113 >UniRef50_A4VPC8 Site-specific recombinase, phage integrase family n=6 Tax=Proteobacteria RepID=A4VPC8_PSEU5 Length = 455 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D K++++ KP +++D GL + + P G ++++YR GK N +G +P +S Sbjct: 58 LTDAKIKSV--KPTDRDWKLSDGGGLFLLVKPTGCKLWRWKYRLQGKENLFAIGSFPQVS 115 Query: 63 LKDARQITADLRKLYFSGTDP 83 L +AR R L G P Sbjct: 116 LAEARTAREKARALVKQGIHP 136 >UniRef50_C8Q072 Phage integrase family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q072_9GAMM Length = 402 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%) Query: 13 GKPYSGPQEVADADGLSVRISPKGVIQ--FQYRYRWHGKPNRLGLGRYPSLSLKDARQIT 70 KP P + D +GL + ++ G QY + K + + LGRYP+++L DAR+ Sbjct: 16 AKPQDKPYRLYDGEGLLLNVASSGTKTWYLQYSKPFTKKKDMVNLGRYPTVNLADARKQK 75 Query: 71 ADLRKLYFSGTDPRTYFEEKV 91 ++L DP+T+FEE+ Sbjct: 76 NYCQELLSKDIDPKTHFEEEA 96 >UniRef50_Q1Q875 Phage integrase n=3 Tax=Gammaproteobacteria RepID=Q1Q875_PSYCK Length = 452 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 7/88 (7%) Query: 3 ISDTKLRTIYGKPY-----SGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGR 57 +SD K+R + KP S P + +D GL + + G + YR+ GK + LG Sbjct: 2 LSDAKIRKL--KPTDKCTPSRPDKYSDQQGLQLLVRSSGTRTWVSAYRFDGKQQKTTLGT 59 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRT 85 YP + L +AR AD++ L +G +P+ Sbjct: 60 YPQMGLAEARVANADIKALVANGINPKN 87 >UniRef50_C5V4I9 Integrase family protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4I9_9PROT Length = 410 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 42/84 (50%) Query: 6 TKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKD 65 T+L KP P +++D GL + + G ++ YR+ K L LG YP +SL D Sbjct: 4 TELAVKNAKPKDKPYKLSDGGGLFLLVQINGGKYWRLAYRFADKQKTLALGIYPDISLAD 63 Query: 66 ARQITADLRKLYFSGTDPRTYFEE 89 AR+ RKL + TDP +E Sbjct: 64 ARERREQARKLLANDTDPSAIKKE 87 >UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE42_ECOK1 Length = 418 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 4/83 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRY--PS 60 ++DTKL+ + KP +V+D DGL V + G + F+Y YR +G+ L +G+Y Sbjct: 2 LTDTKLKNL--KPQDKLYKVSDRDGLYVAVLTSGTVSFRYDYRINGRRETLVIGQYGRDG 59 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL +AR+ +KL +G P Sbjct: 60 ISLAEAREELIAAKKLLKAGQSP 82 >UniRef50_B0U0U5 Phage integrase n=1 Tax=Francisella philomiragia subsp. philomiragia ATCC 25017 RepID=B0U0U5_FRAP2 Length = 398 Score = 48.1 bits (113), Expect = 8e-05, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +++TK++ I K Q V D GL +R+ G +Q R+ + K GLG YPS + Sbjct: 2 LTETKIKKI--KATGKEQRVIDTLGLYLRVDKNGNKTWQLRHTINEKRKWFGLGSYPSTN 59 Query: 63 LKDARQITADLRKLYFSGTD 82 L +AR+++A+LR+ +G D Sbjct: 60 LNEARKLSAELRERIDNGED 79 >UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QCE7_9RHIZ Length = 418 Score = 48.1 bits (113), Expect = 8e-05, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 37/83 (44%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M + +L I P D GL +R+ P G + +RY KP LGLG S Sbjct: 1 MPKTTHRLNAISASNIKKPGLYPDGAGLYLRVKPSGARSWVFRYMHDRKPRYLGLGSAAS 60 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL AR + D R+ G DP Sbjct: 61 VSLATARSLAGDARRQLDLGQDP 83 >UniRef50_B6WTC3 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTC3_9DELT Length = 269 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 5/108 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +++ K++ I KP D+ GL +++SP G ++++YR K + LG +P +S Sbjct: 4 LTELKIKAI--KPSEKMARYYDSGGLYLQVSPTGGKYWRFKYRVEKKEKLVALGTWPQVS 61 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWFDN 107 LK+AR+ R+ +G DP + + E + T + + W +N Sbjct: 62 LKEAREKRDQCRQEIAAGNDPMLLKKARAEAACPGRTFQEVAEAWRNN 109 >UniRef50_Q5E028 Phage family integrase n=2 Tax=Vibrionaceae RepID=Q5E028_VIBF1 Length = 399 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 9/111 (8%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYPS 60 ++D K+++ P ++D +GL +R+ P G +Q+++ K ++ LG YP Sbjct: 8 LTDRKIKS--AAPTGKEFTLSDGEGLQLRVRPTGAKSWQFKFSDPVTRKIQKIALGPYPE 65 Query: 61 LSLKDARQITADLRKLYFSGTDPRTY-----FEEKVENSMTVAQCLDYWFD 106 LSL +AR T + R L +P+++ E K + T + WF+ Sbjct: 66 LSLANARSKTTEYRTLLAQKINPKSFEQSKELEAKRVQTSTFIVVAEQWFE 116 >UniRef50_B8L9U1 Phage integrase family protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9U1_9GAMM Length = 399 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 7/110 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K+R KP P ++D GL + I P G ++Y YR K L +G Sbjct: 1 MALTDFKIRG--AKPAEKPYRLSDGGGLFLEIRPNGSKLWRYAYRLDSKQRLLAIGSLQD 58 Query: 61 LSLKDARQITADLRKLYFSGTDP---RTYFEEKVENSM--TVAQCLDYWF 105 +SL DAR + G DP R + + E S TVA+ + W+ Sbjct: 59 VSLADARAAMRQAKSQVKLGQDPVLQRKIAKARSEESALNTVAENAEDWY 108 >UniRef50_Q2YCS6 Putative uncharacterized protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCS6_NITMU Length = 133 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D +R KP S ++AD G+ + + P G + +YR+ GK RL G YP Sbjct: 1 MKLNDVAVRK--AKPESKSYKMADGGGMYLEVMPNGSKYWWLKYRFGGKEKRLACGVYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 + L R D KL G DP Sbjct: 59 VPLSLVRSWRDDACKLLAQGIDP 81 >UniRef50_C8UI65 Putative integrase n=1 Tax=Escherichia coli O111:H- str. 11128 RepID=C8UI65_ECO1A Length = 352 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Query: 13 GKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITAD 72 KP ++AD GL + + P G ++ +YR GK L LG YP ++L DAR D Sbjct: 11 AKPKEKAYKLADGGGLYLLVKPNGGKYWRLKYRVAGKEKLLALGVYPEVTLADARAKRED 70 Query: 73 LRKLYFSGTDP-RTYFEEKV 91 ++ G DP EEK+ Sbjct: 71 AKRGIAGGIDPMEAKREEKI 90 >UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria RepID=Q3SF40_THIDA Length = 440 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 3/84 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRW-HGKPNRLGLGRYP 59 MA+SD+KLRT+ KP +D GL + I P G ++ +YR GK + LG YP Sbjct: 1 MALSDSKLRTL--KPADRVFSESDGGGLYIEIMPTGKRRWGLKYRIPTGKQETIRLGDYP 58 Query: 60 SLSLKDARQITADLRKLYFSGTDP 83 + SL DAR D + L G P Sbjct: 59 AYSLADARTWRDDCKALAGRGLSP 82 >UniRef50_C8PUK8 Phage integrase family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PUK8_9GAMM Length = 446 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 5/96 (5%) Query: 22 VADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYPSLSLKDARQITADLRKLYFS 79 +A GL +RI P G +F++RY + GK + LG YP+ SL A+Q D L Sbjct: 28 IAGFKGLELRIRPNGKAEFRHRYTHPYTGKRPYMTLGSYPAFSLAQAKQAYNDNMALLAQ 87 Query: 80 GTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 DP T+ E+ EN+ A LD F+ L E Sbjct: 88 TIDPLTHKEQ--ENAKQ-AYALDNTFEAVAKDWLNE 120 >UniRef50_D0SZI9 Integrase n=14 Tax=cellular organisms RepID=D0SZI9_ACILW Length = 401 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 4/71 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG--KPNRLGLGRY 58 M++++ K+R K +AD DGLS+++ P G + YRY G K R+ LG Y Sbjct: 1 MSLTEIKVRQ--AKSKEKIYFLADDDGLSLKVEPNGRKSWSYRYSLAGTNKRPRMKLGEY 58 Query: 59 PSLSLKDARQI 69 P +SLK+AR + Sbjct: 59 PVMSLKEARSV 69 >UniRef50_A5WEP7 Phage integrase family protein n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WEP7_PSYWF Length = 421 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 9/99 (9%) Query: 22 VADADGLSVRISPKGVIQFQYRYRWHGKPN---RLGLGRYPSLSLKDARQITADLRKLYF 78 VA GLSVRI P G ++ RY +PN R+ LG +SL +A+ + + Sbjct: 23 VAGVPGLSVRIYPNGKKEYYLRYPHPHQPNKRPRMTLGSVEDISLHEAKTKAESILDMVR 82 Query: 79 SGTDPRTYFEEKVEN------SMTVAQCLDYWFDNYVST 111 +GTDP+ ++K N + T A+ W DN +++ Sbjct: 83 NGTDPKAIRQQKQVNKYAHLTNATFAEIAAAWRDNKINS 121 >UniRef50_A1SRI6 Phage integrase family protein n=2 Tax=Alteromonadales RepID=A1SRI6_PSYIN Length = 416 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYPS 60 +SDT++R K ++D GL +RI P G +Q R+ KP +G G YP+ Sbjct: 7 LSDTQIRLT--KASDKVITLSDGGGLQLRIKPNGSKLWQLRFNKPIEKKPALMGFGAYPA 64 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE 92 +SL +AR++ +L G +P+ + +++ Sbjct: 65 ISLANARKLREAANELLAQGINPKAQRDSEIK 96 >UniRef50_B4RZR6 Prophage CP4-like integrase n=2 Tax=Proteobacteria RepID=B4RZR6_ALTMD Length = 412 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 22 VADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGT 81 + D GL + + G ++ +YR+ GK L +G YP +SLKDAR+ ++ R+ Sbjct: 20 LTDEKGLRLLVKKNGSKYWRLKYRFQGKQKTLAIGVYPEVSLKDAREAVSEARRQLRDDI 79 Query: 82 DPRTYFEEK 90 DP +EK Sbjct: 80 DPSAIKQEK 88 >UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio RepID=B8J055_DESDA Length = 402 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +++ K+R I KP + D +GL + S G ++ +YR +GK RL G +P +S Sbjct: 7 LTEIKIRNI--KPNGKIERFVDGEGLYLETSVAGGKHWRMKYRVNGKEKRLSFGPWPDIS 64 Query: 63 LKDARQITADLRKLYFSGTDP 83 LK+AR++ + ++ DP Sbjct: 65 LKEAREMRDEAKRQLRESLDP 85 >UniRef50_A4VJM8 Integrase n=2 Tax=Gammaproteobacteria RepID=A4VJM8_PSEU5 Length = 467 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 6/84 (7%) Query: 27 GLSVRISPKGVIQFQ-YRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRT 85 GL +R+SP GV F YR G+P R+ LGR+P+++++ AR+ + + +G +P Sbjct: 35 GLQLRVSPSGVKTFSLYRRMKGGQPERVTLGRFPAMTVEQARKHASAVNAEIEAGGNP-- 92 Query: 86 YFEEKVENSMTVAQCLDYWFDNYV 109 ++ V Q FD+++ Sbjct: 93 ---AAARRAIRVEQSFGEVFDDFL 113 >UniRef50_C6DZF1 Integrase family protein n=1 Tax=Geobacter sp. M21 RepID=C6DZF1_GEOSM Length = 443 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 3/106 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 + +DT +R + KP ++ +G +VR+ P GV + Y Y + GK + LG YP Sbjct: 7 IMFTDTMIRKL--KPGEVKYIRSEGNGFTVRVMPSGVKTWLYLYSFEGKRREMNLGGYPH 64 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD 106 +SL+ AR+ RK + DP KV + V + D FD Sbjct: 65 VSLETARERFEAARKKVKNNIDPMAE-NPKVAEVVEVERRHDLTFD 109 >UniRef50_C3MAV8 DNA integration/recombination/invertion protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MAV8_RHISN Length = 429 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%) Query: 14 KPYSGPQEVADA--DGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITA 71 K S +E+ D GL + + GV + RYR GKP ++ LG +P++SL DAR+ Sbjct: 16 KAGSSRREIPDGALQGLYLIVQTTGVKSWAVRYRHAGKPRKMTLGGFPAISLSDAREEAR 75 Query: 72 DLRKLYFSGTDPRTYFEEKVE 92 ++ G DP T EK E Sbjct: 76 KALRMVSEGRDPAT---EKAE 93 >UniRef50_Q8W6M6 Putative uncharacterized protein orf1 n=1 Tax=Sinorhizobium phage PBC5 RepID=Q8W6M6_9CAUD Length = 433 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 4/101 (3%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 A++D +++ K ++AD GL++ + G ++ RYR+ GK L +G YP + Sbjct: 3 ALTDKQIKN--AKKADKDYKLADGGGLNLFVLSTGTKSWRLRYRFDGKEKTLVIGNYPDV 60 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLD 102 SL DAR ++ SG DP +K+E ++ Q D Sbjct: 61 SLADARGEREAAKETLKSGRDPNVV--KKIEKAIGKQQAAD 99 >UniRef50_Q0F3U9 Prophage CP4-like integrase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3U9_9PROT Length = 228 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD ++ +++D GL + + P G ++ YR+ GK L LG YP+ Sbjct: 1 MALSDEQVNEASIPEGKKQLKISDGGGLYLLVKPSGRY-WKLAYRFDGKQKSLALGVYPA 59 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL DARQ + L G DP Sbjct: 60 VSLDDARQKREQAKSLLADGVDP 82 >UniRef50_C8R2J0 Integrase family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2J0_9DELT Length = 420 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 6/87 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGK----PNRLGLG 56 M ++D ++R + K + + D GL + ++P G ++++YR+ G+ RL LG Sbjct: 1 MTLTDAQVRNV--KAEDKTRRLFDGGGLYLEVAPSGGKWWRFKYRFPGQGKIQEKRLSLG 58 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDP 83 YP + LK+AR ++R+ G DP Sbjct: 59 TYPGVGLKEARAKRDEMRRQIAQGIDP 85 >UniRef50_B1Y4T5 Integrase family protein n=3 Tax=Betaproteobacteria RepID=B1Y4T5_LEPCP Length = 427 Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQ------FQYRYRWHGKPNRLGLG 56 ++DT+ R +ADA GL + + P G ++++YR GK L +G Sbjct: 2 LTDTECRNAKCPEGRAFVRLADAGGLYLEVKPPGAKTPSGSKLWRWKYRHGGKEKLLAIG 61 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDP 83 YP++S+ AR+ A R L +GTDP Sbjct: 62 AYPAVSVAGARREQAKARALLDAGTDP 88 >UniRef50_C6RLT7 Phage integrase n=2 Tax=Acinetobacter radioresistens RepID=C6RLT7_ACIRA Length = 405 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D K++ + K VAD GL + + G ++YRYR+ P L +G YP +S Sbjct: 2 LNDLKIKQLKAK--DKMYRVADHAGLCLEVRTTGSKFWRYRYRYLNIPKMLTIGPYPEIS 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQ 99 L AR T + R + DP T ++ ++++M Q Sbjct: 60 LSYARDKTREYRGMLAKNLDPVTEQKKALDSAMDAIQ 96 >UniRef50_B5AXB8 Putative integrase n=1 Tax=Escherichia coli RepID=B5AXB8_ECOLX Length = 396 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 4/85 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYPS 60 ++D +L++ KP +++D GL + +S G ++ +YR K +RL G YP+ Sbjct: 9 LTDRQLQST--KPRDKTYKLSDGGGLYLEVSQTGSKYWRMKYRRPSDKKEDRLAFGVYPT 66 Query: 61 LSLKDARQITADLRKLYFSGTDPRT 85 +SL+DAR+ + +KL G DP+ Sbjct: 67 ISLQDAREKRDNAKKLLVKGIDPKA 91 >UniRef50_B8J346 Putative phage integrase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J346_DESDA Length = 208 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 1/95 (1%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 I K +T P +++D +GL + ++ + I ++ RY + GK L LG+YP +S Sbjct: 8 IEAAKPKTNKKTGKQAPVKLSDENGLMLFVTSQNKI-WRARYFYMGKEQNLTLGKYPLMS 66 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSMTV 97 LK+AR+ LR+ G +P + K E + V Sbjct: 67 LKEAREANFALRQQLDRGENPAKAKKAKQEEQLAV 101 >UniRef50_Q4K6S7 Site-specific recombinase, phage integrase family n=4 Tax=Proteobacteria RepID=Q4K6S7_PSEF5 Length = 413 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 3/82 (3%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY-RWHGKPNRLGLGRYPSL 61 ++DT L + +P + D +GL R+ P G +Q RY R G +GLG YP + Sbjct: 11 LADTTLTGL--EPEAKEYRELDGNGLYFRVKPDGGKSWQLRYKRPAGNWAWMGLGGYPEV 68 Query: 62 SLKDARQITADLRKLYFSGTDP 83 S AR+ A+LRK SG DP Sbjct: 69 SGALAREKAAELRKTISSGIDP 90 >UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KUI7_METC4 Length = 414 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 3/74 (4%) Query: 13 GKPYSGPQ-EVADA--DGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQI 69 KP G + EV DA GL + + P G + RYR GKP +L LG YP L L DAR+ Sbjct: 12 AKPDPGKRREVPDAALPGLYLVVQPAGGKSWAVRYRAAGKPRKLTLGPYPRLGLADAREA 71 Query: 70 TADLRKLYFSGTDP 83 G DP Sbjct: 72 ARTALHAVAEGRDP 85 >UniRef50_A4JAY4 Phage integrase family protein n=22 Tax=Bacteria RepID=A4JAY4_BURVG Length = 405 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%) Query: 17 SGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKL 76 +G ++ D GL + + G +++ +YR++GK N L G YP+ SL DAR + ++L Sbjct: 19 AGGNKLFDGGGLYLDLRSSGSKKWRLKYRFNGKENLLTFGDYPATSLADARSRRDEAKRL 78 Query: 77 YFSGTDPRTYFEEKVEN 93 G +P FE VE Sbjct: 79 LAEGKNP--AFERDVEK 93 >UniRef50_B5F474 Integrase n=26 Tax=Proteobacteria RepID=B5F474_SALA4 Length = 449 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Query: 13 GKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG--KPNRLGLGRYPSLSLKDARQIT 70 KP ++AD GL + +SPKG ++ +YR K +RL G YP+++L +AR Sbjct: 40 AKPKEKAYKMADGGGLYLEVSPKGSKYWRMKYRRPSDKKEDRLAFGVYPTITLAEARAKR 99 Query: 71 ADLRKLYFSGTDPRT 85 +KL G DP+ Sbjct: 100 DAAKKLLSQGIDPKV 114 >UniRef50_Q0EWR9 Integrative genetic element Gsu32, integrase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWR9_9PROT Length = 391 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 7/114 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADA--DGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRY 58 M +D +++I +P EV + G +VR+S G F + Y+ +G+ RL G Y Sbjct: 1 MKFTDRSIKSI--RPTGKRFEVRETGRTGFAVRVSTTGTKTFVFIYKINGQKKRLSFGTY 58 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVE---NSMTVAQCLDYWFDNYV 109 P++SL +A + + + G DP +K + N +T+ + + + + Y Sbjct: 59 PAMSLNEAHLLYEEAKLELEKGNDPALIKAKKSQLEKNEVTIPELIKLYINQYA 112 >UniRef50_C8PFJ4 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFJ4_9PROT Length = 383 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++ T+L+ + KP P V D L ++I P G F Y Y+ K R+ +GR +S Sbjct: 8 LTATQLKNL--KPKDKPYFVGDGSNLLIKIMPSGAKFFIYEYKQGAKYKRVTIGRAGEMS 65 Query: 63 LKDARQITADLRKLYFSGTDPRTY---FEEKVENSMTVAQCLDYWFDNYVSTTL 113 L +ARQ ++L K +D T+ FEE ++ ++ +W + + L Sbjct: 66 LAEARQRKSEL-KTRVKTSDKITFREVFEEWIKTKSKISPKQLFWINRRFESLL 118 >UniRef50_B3A9A3 Prophage integrase n=2 Tax=Escherichia coli O157:H7 RepID=B3A9A3_ECO57 Length = 412 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 7/109 (6%) Query: 14 KPYSGPQEVADADGLSVRISPKG--VIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITA 71 KP V D GL + +S G V +F+Y + K +GR+P SL +AR++ Sbjct: 15 KPREKDYAVYDGFGLLLNVSKAGGKVWRFRYSHPITKKRQTYTIGRFPEFSLAEAREVRD 74 Query: 72 DLRKLYFSGTDPRT-----YFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 +LR++ G DP T E ++N T + WF + LR+ Sbjct: 75 ELRRMIARGVDPVTEKKNRKIEMSLKNLQTFEAVANAWFAFKKGSELRK 123 >UniRef50_Q3SHC8 Probable cp4-like integrase protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHC8_THIDA Length = 425 Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 +A++DT ++ KP P ++AD GL + ++ G ++ YR+ GK L LG Y Sbjct: 17 VALTDTAVKK--AKPGDKPYKMADEKGLYLLVNQAGKY-WRMDYRFLGKRKTLALGVYSD 73 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL ARQ D R + GTDP Sbjct: 74 VSLARARQKRDDARAMLADGTDP 96 >UniRef50_B9MGW9 Integrase family protein n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MGW9_DIAST Length = 428 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQ-FQYRYRWHGKPNRLGLGRYP 59 MA+SDT +R++ KP +++ D +GL + + G +++ Y+ GK + LG YP Sbjct: 4 MALSDTTIRSV--KPGDPRRQLTDGNGLYLLLYVNGGKHGWRFDYKVQGKRKTISLGTYP 61 Query: 60 SLSLKDARQITADLRKLYFSGTDP 83 + SL AR R+L +G DP Sbjct: 62 ATSLSLARAKANAARELVAAGIDP 85 >UniRef50_A1WW57 Phage integrase family protein n=4 Tax=Proteobacteria RepID=A1WW57_HALHL Length = 412 Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEV--ADADGLSVRISPKGVIQFQYRYRW-HGKPNRLGLGRYP 59 ++D + RT KP G Q++ D GL + + G Q+Q+RYR G+ +GLG YP Sbjct: 8 LTDRQCRT--AKPPEGKQQLKLTDGGGLVLLVKSNGGKQWQFRYRRPSGREATMGLGVYP 65 Query: 60 SLSLKDARQITADLRKLYFSGTDP 83 + L AR+ + R L G DP Sbjct: 66 DVPLSKARERRDEARALLADGIDP 89 >UniRef50_UPI00016B13C2 phage integrase family protein n=1 Tax=Burkholderia pseudomallei BCC215 RepID=UPI00016B13C2 Length = 324 Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 39/71 (54%) Query: 13 GKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITAD 72 K + P ++ D +G+ + + P G ++ YR+ GK L LG YP+++L AR+ + Sbjct: 4 AKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVTLATARKKRDE 63 Query: 73 LRKLYFSGTDP 83 R+ +G DP Sbjct: 64 AREQIAAGIDP 74 >UniRef50_D0BVL9 Phage integrase n=2 Tax=Acinetobacter RepID=D0BVL9_9GAMM Length = 441 Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 6/115 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY-RWHGKPNRLGLGRYP 59 + +SD+K KP + D GL + I G ++++Y R +GK + LG +P Sbjct: 6 IPLSDSKCTG--AKPQEKDYSLYDGHGLILFIRKSGSKVWRFKYKRANGKDGLMTLGNFP 63 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWFDNYVST 111 +LSLK AR +L L +G DP Y E K++N W Y +T Sbjct: 64 ALSLKTARDKRRELETLLANGIDPIEYSEIQKAKLDNKYNFESIAREWHTAYKNT 118 >UniRef50_A1BGX1 Phage integrase family protein n=25 Tax=root RepID=A1BGX1_CHLPD Length = 419 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 + +SD ++ KP +++D GL + ++ G ++++YR+ GK L LG+YP Sbjct: 6 LPLSDAQVSK--AKPAEKDYKLSDGGGLHLLVTTSGGKLWRFQYRFDGKQKLLALGQYPE 63 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 +SL +AR+ + R L + DP Sbjct: 64 ISLANARKRREEARTLLANEQDP 86 >UniRef50_B1Y3M2 Integrase family protein n=4 Tax=Proteobacteria RepID=B1Y3M2_LEPCP Length = 433 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 35/64 (54%) Query: 20 QEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFS 79 + + D DGL + + P G +++RYR+ GK L LG YP SL AR + R+ + Sbjct: 26 ERLTDGDGLRLDVQPTGSAWWRWRYRFGGKEGMLSLGTYPDTSLSAARGRRDEARERLAA 85 Query: 80 GTDP 83 G +P Sbjct: 86 GINP 89 >UniRef50_Q8DAY4 Integrase n=1 Tax=Vibrio vulnificus RepID=Q8DAY4_VIBVU Length = 440 Score = 45.4 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 38/69 (55%) Query: 28 LSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYF 87 L+V+++P G F+++Y K + LG++P+L+L AR + + ++ G DP+ Sbjct: 31 LTVQVTPAGSKIFKFKYHKEKKEVFIALGKFPALTLSKARDLANEYSEMLSKGLDPKNEL 90 Query: 88 EEKVENSMT 96 E + E T Sbjct: 91 ERQSEEKKT 99 >UniRef50_P08320 Integrase n=31 Tax=root RepID=VINT_BPP4 Length = 439 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%) Query: 13 GKPYSGPQEVADADGLSVRISPKGVIQFQYRYRW--HGKPNRLGLGRYPSLSLKDARQIT 70 KP ++AD GL + +S KG ++ +YR K +RL G +P+++L AR Sbjct: 15 AKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKR 74 Query: 71 ADLRKLYFSGTDPRTYFEE-KVENS 94 + +KL G DP+ +E + ENS Sbjct: 75 DEAKKLLVQGIDPKVVQKEARAENS 99 >UniRef50_Q1GR78 Putative uncharacterized protein n=1 Tax=Sphingopyxis alaskensis RepID=Q1GR78_SPHAL Length = 108 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M + +T+L + +P P +VAD G V + P G +++RYR +L +G YP+ Sbjct: 1 MPLIETRLCAL--EPKDKPYKVADDRGFYVEVFPAGGKLWRFRYRIGPVEQKLSIGAYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTD-PRTY 86 +SLK ARQ L ++ G PR + Sbjct: 59 ISLKQARQSAWTLAQVSIDGRPMPRAF 85 >UniRef50_A7FP63 Site-specific recombinase, phage integrase family, truncation n=3 Tax=Enterobacteriaceae RepID=A7FP63_YERP3 Length = 90 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD ++R KP ++D GLS+ I P G +++RYR+ GK + LG Y Sbjct: 1 MPLSDRQIR--RAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDL 58 Query: 61 LSLKDAR 67 +SL +AR Sbjct: 59 VSLAEAR 65 >UniRef50_P37317 Integrase n=42 Tax=root RepID=VINT_BPSFV Length = 385 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Query: 13 GKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITAD 72 KP P + D +GL + + G +Q RY+ GK L +G+YP ++L++AR Sbjct: 10 AKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWT 69 Query: 73 LRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDN 107 RK G DP ++ N+ + + W+D+ Sbjct: 70 ARKDISVGIDP-VKAKKASSNNNSFSAIYKEWYDH 103 >UniRef50_A1TYD6 Phage integrase family protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TYD6_MARAV Length = 412 Score = 45.1 bits (105), Expect = 6e-04, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 5/98 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +++T ++ Y ++AD GL + I G ++ +YR+ GK L LG YP +S Sbjct: 8 LTETAVKHATFSKYGKRTKLADGAGLYLDIQKAGRY-WRLKYRYGGKEKLLALGVYPDVS 66 Query: 63 LKDARQITADLRKLYFSGTDPRTYFE----EKVENSMT 96 LK+AR + ++L DP T+ + E+VE + T Sbjct: 67 LKEARAKRDEAKRLLADNIDPVTHRQREKAERVEATAT 104 >UniRef50_A0Q4W3 Phage integrase n=4 Tax=Francisella RepID=A0Q4W3_FRATN Length = 398 Score = 45.1 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 30/59 (50%) Query: 28 LSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTY 86 L + I P F YRY + GK +GLG YP+++ K AR+ L G DP+ Y Sbjct: 24 LYLVIKPTNTKSFMYRYYFKGKAQSMGLGGYPTITYKKAREEARTLNIAKEQGIDPKVY 82 >UniRef50_Q1NGR6 Putative phage integrase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGR6_9SPHN Length = 428 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DT +++I P + P + AD GL++ + P G ++ + YR+H K + G YP +S Sbjct: 2 LTDTLIQSII--PAARPIKKADGGGLNICVLPNGRREWCFSYRFHHKQKSITGGDYPLMS 59 Query: 63 LKDARQITADLRKLYFSGTDP 83 + AR +++ +G DP Sbjct: 60 IDRARVWREEMKAALSAGKDP 80 >UniRef50_B8ERI0 Integrase family protein n=1 Tax=Methylocella silvestris BL2 RepID=B8ERI0_METSB Length = 400 Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 14 KPYSGPQEVADAD--GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITA 71 KP + EV D GL + P G + YR+ + GKP +L +G YP++ L AR I Sbjct: 14 KPQAKRCEVPDGHTRGLYFVVQPSGAKSWAYRFSFEGKPKKLTIGSYPAIDLSRARSIAL 73 Query: 72 DLRKLYFSGTDPRTYFEEKVE 92 +G +P E+KVE Sbjct: 74 ASATKVANGRNPAA--EKKVE 92 >UniRef50_C4GIW0 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIW0_9NEIS Length = 394 Score = 45.1 bits (105), Expect = 8e-04, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 44/76 (57%) Query: 15 PYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLR 74 P G ++++D GL ++I KG ++ +Y ++ K + LG YP++ LK AR ++ Sbjct: 14 PDKGVKQLSDGGGLYLQIDAKGRRYWRIKYTYNQKQHTQHLGIYPAMPLKAARMERDKIK 73 Query: 75 KLYFSGTDPRTYFEEK 90 L G +P+T+ E++ Sbjct: 74 LLLSQGINPKTHQEQQ 89 >UniRef50_A3M8T8 Phage integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M8T8_ACIBT Length = 425 Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 2/97 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 + DT+++ + KP P DAD L + + P G + +++ + K + G YPS+S Sbjct: 2 LKDTQVKNL--KPQDKPYRKLDADRLYIEVRPSGKKVWIHKFSLNKKEGSITYGEYPSIS 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQ 99 L +AR A R L G +P + E ++ Q Sbjct: 60 LAEARYYHARDRALLAKGINPVAHRNETARLALETEQ 96 >UniRef50_A7ZQ61 Phage integrase family protein n=32 Tax=Gammaproteobacteria RepID=A7ZQ61_ECO24 Length = 436 Score = 44.7 bits (104), Expect = 9e-04, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 12/120 (10%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISP-----KGVIQFQYRYRWHGKPNRLGLGR 57 ++DT++++ KP + D DGL +RI+P K F+Y K ++ LG Sbjct: 35 LTDTEIKST--KPAEKEVNLFDGDGLLLRIAPLAKGGKKNWYFRYAVPVTKKRTKVSLGT 92 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNYVSTT 112 YP L+L AR + + L +G DP+ + +K T W D V T+ Sbjct: 93 YPHLTLAKARALRDEYLSLLTNGIDPQVHNNQKANALKDATEHTFQAVAKKWLDEKVKTS 152 >UniRef50_UPI00016937EF ISXoo5 transposase n=2 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=UPI00016937EF Length = 376 Score = 44.7 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 32/54 (59%) Query: 6 TKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 T L KP + Q + D+DGL + +SPKG F+ +YR+ GK RL +G +P Sbjct: 15 TDLAIRRAKPAAKTQRLYDSDGLYLELSPKGGRWFRLKYRFGGKEKRLAIGVHP 68 >UniRef50_A4Y9I4 Phage integrase family protein n=3 Tax=Shewanella RepID=A4Y9I4_SHEPC Length = 432 Score = 44.7 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%) Query: 23 ADADGLSVRISPKGVIQFQYRYRWHGK-----PNRLGLGRYPSLSLKDARQITADLRKLY 77 A DGL +R+ +GV ++ RY +GK PN G YP++SL +A+ A ++ L Sbjct: 29 AVGDGLYIRVQTEGVAYWEVRYSVNGKRRSMVPNG---GVYPAMSLVEAKAEAAKVKLLA 85 Query: 78 FSGTDPRTYFEEKVENSM-TVAQCLDYWF 105 G DP E + E ++ TV D W+ Sbjct: 86 KQGIDPLAERERQQEITIKTVNDLFDDWY 114 >UniRef50_P39347 Putative prophage P4 integrase n=97 Tax=Enterobacteriaceae RepID=INTB_ECOLI Length = 396 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 32/56 (57%) Query: 28 LSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDP 83 + + + P G ++ +YR+ GK L LG YP ++L DAR + RKL +G DP Sbjct: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP 56 >UniRef50_Q3J1E6 Possible phage-related integrase n=2 Tax=Rhodobacter sphaeroides RepID=Q3J1E6_RHOS4 Length = 413 Score = 44.3 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 14 KPYSGPQEVADA--DGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITA 71 KP QE+ D+ GL + + P G +Q RYR G R+ LG +P LSL AR+ Sbjct: 12 KPTDKRQEIPDSLCVGLYLIVQPTGKKGWQVRYRHGGVHRRMSLGAFPVLSLAGARERAR 71 Query: 72 DLRKLYFSGTDP 83 +GTDP Sbjct: 72 QTLAAASAGTDP 83 >UniRef50_C8KXV2 Prophage CP4-57-like integrase n=1 Tax=Actinobacillus minor 202 RepID=C8KXV2_9PAST Length = 406 Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query: 5 DTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYPSLS 62 DT+++ KP P + D GL + +SP G +++ Y K ++ LG YP+++ Sbjct: 10 DTEIKK--AKPEDKPYTMTDGQGLFLIVSPTGSKSWRFNYYRPISKKRAKIALGMYPAIT 67 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEE 89 L AR + + + L +G DP+ + ++ Sbjct: 68 LSKARALRDEYKHLLANGIDPQEHCKQ 94 >UniRef50_A0KW55 Phage integrase family protein n=30 Tax=Gammaproteobacteria RepID=A0KW55_SHESA Length = 411 Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 6/101 (5%) Query: 13 GKPYSGPQEVADADGLSVRISPKG-VIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITA 71 K + P ++D L + + G +F+Y KP GLG YP +SL +AR Sbjct: 16 AKAEAKPYRLSDGGNLYLYVRTAGKTWEFRYIRPSTSKPTYFGLGSYPDVSLAEARDKAL 75 Query: 72 DLRKLYFSGTDPR-----TYFEEKVENSMTVAQCLDYWFDN 107 + RK G DP+ + EN+ T+ W D+ Sbjct: 76 EARKNLAEGIDPQLLKVENKLKAATENAQTLKHIAQMWMDS 116 >UniRef50_A9FYM8 Site-specific recombinase, phage integrase family protein n=1 Tax=Phaeobacter gallaeciensis BS107 RepID=A9FYM8_9RHOB Length = 457 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 3/69 (4%) Query: 14 KPYSGPQEVAD--ADGLSVRISPKGVIQFQYRYR-WHGKPNRLGLGRYPSLSLKDARQIT 70 KP Q ++D + GLS+R+ G + Y R HGK +GRYP +SLK ARQ Sbjct: 31 KPSCKRQTISDDVSQGLSLRVGVSGTKTWSYMGRDCHGKSRTETIGRYPDVSLKAARQKA 90 Query: 71 ADLRKLYFS 79 LR+++ S Sbjct: 91 DQLRQVFAS 99 >UniRef50_C3XC22 Integrase n=3 Tax=Oxalobacter formigenes RepID=C3XC22_OXAFO Length = 427 Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Query: 14 KPYSGPQEVADADGLSVRISPKGVIQFQYRY-RWHGKPNRLGLGRYPSLSLKDARQITAD 72 KP ++ D GL + + P G ++ ++ + GK +RL LG YP +SL+ R+ + Sbjct: 17 KPKEKAYKLFDGGGLYLEVLPSGSKLWRLKFQKPSGKESRLSLGAYPDVSLEQVRKKREE 76 Query: 73 LRKLYFSGTDPRTYFEEKVE 92 R+L G DP +E+ E Sbjct: 77 ARRLLAQGIDPSEDRKEQKE 96 >UniRef50_Q8XZB0 Putative integrase-like protein n=1 Tax=Ralstonia solanacearum RepID=Q8XZB0_RALSO Length = 233 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 43 RYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTV 97 +YR+ GK RL LG YP + LK+AR D ++L G DP E +V+ TV Sbjct: 2 KYRFAGKEKRLSLGVYPEVGLKEARDRREDAKRLLADGVDPSV--ERRVQKVATV 54 >UniRef50_Q0TL05 Phage integrase n=6 Tax=Escherichia coli RepID=Q0TL05_ECOL5 Length = 439 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 34/65 (52%) Query: 42 YRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCL 101 YRYR KP +L LG YP++ L AR+ AD +L G DPR + + + + + Sbjct: 50 YRYRIAQKPAKLTLGSYPAMGLAQARKAHADAIELVRKGIDPRHIRKNEKQKNEQMIIYS 109 Query: 102 DYWFD 106 + W D Sbjct: 110 ELWKD 114 >UniRef50_A1WTV4 Phage integrase family protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTV4_HALHL Length = 379 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 4/67 (5%) Query: 25 ADGLSVRISPKGVIQFQYRYRWHGKPNR-LGLGRYPSLSLKDARQITADLRKLYFSGTDP 83 A GL V + P G + YRYR H R L R+ +SLKDAR + + + SG DP Sbjct: 26 APGLIVEVRPTGSATYFYRYRNHAGLTRSCKLARFREISLKDARSLAREKASIVASGHDP 85 Query: 84 RTYFEEK 90 + EEK Sbjct: 86 Q---EEK 89 >UniRef50_A0Q3W3 Phage integrase n=8 Tax=Francisella RepID=A0Q3W3_FRATN Length = 413 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%) Query: 22 VADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGT 81 + D +GL +++S G +Q+RY+ GK LG+G YP++SLK AR ++ G Sbjct: 22 LNDGNGLYIKVSKAGSKSWQFRYK--GK--WLGIGSYPAISLKQARDEAFKYNQMLAGGK 77 Query: 82 DPR 84 DP+ Sbjct: 78 DPK 80 >UniRef50_C7JF17 Phage DNA recombinase n=8 Tax=Acetobacter pasteurianus RepID=C7JF17_ACEP3 Length = 443 Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 33/60 (55%) Query: 24 DADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDP 83 + G +VR++ KG F + Y +G+ R+ LG Y L++ AR++ LR +G DP Sbjct: 26 EVKGFAVRVTSKGSKVFLFNYSKNGRSKRVKLGAYGDLTVAQARKLAETLRGRVIAGEDP 85 >UniRef50_A1ATP4 Phage integrase family protein n=2 Tax=Desulfuromonadales RepID=A1ATP4_PELPD Length = 449 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Query: 4 SDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSL 63 +DT +R + KP ++ +G ++R+ P G + Y Y + GK ++ LG YP ++L Sbjct: 15 TDTMIRKL--KPTESDYTRSEGNGFTIRVMPSGSKTWLYLYAFDGKRRKMNLGSYPDVTL 72 Query: 64 KDARQITADLRKLYFSGTDP 83 + AR D ++ + DP Sbjct: 73 ETARGRFEDAKRKVKNNIDP 92 >UniRef50_A1AQX4 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQX4_PELPD Length = 389 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 3/109 (2%) Query: 6 TKLRTIYGKPYSGPQ-EVADADG--LSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 T+ R +P +G Q +V DA+ +VR+SP+G F R GK R +G +P ++ Sbjct: 8 TQKRVADLQPVAGKQFDVWDAEQPRFAVRVSPRGRKTFFVMRRVKGKLVRATVGTFPEMN 67 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVST 111 + AR++ A++ +G +P + + ++ L FD+Y+++ Sbjct: 68 VDTARKMAAEMLVSMTAGVNPNIERKRERAQQKDKSRLLSAVFDSYLAS 116 >UniRef50_C5RZC7 Phage integrase family protein n=1 Tax=Actinobacillus minor NM305 RepID=C5RZC7_9PAST Length = 420 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 21 EVADAD--GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYF 78 EV+D + GL + G +F +RY + K + LG++P +S+ + R I R+L Sbjct: 37 EVSDTESKGLKCLVGRSGSKRFLFRYTFKNKKCSIALGKFPDISVSEVRNIVRQYRELLC 96 Query: 79 SGTDPR 84 G +P+ Sbjct: 97 CGVNPK 102 >UniRef50_C1TL52 Integrase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL52_9BACT Length = 378 Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+++ +++ P + D++GL + I+P G ++ R++ G+ + LGRYP Sbjct: 1 MALTNVEIKR--ATPREKRYTMRDSEGLWLEITPAGKKTWKVRFKAQGREIKHTLGRYPD 58 Query: 61 LSLKDARQITADLR 74 +SLK+AR ++R Sbjct: 59 ISLKEARLKRDEIR 72 >UniRef50_Q2T3P2 Integrase n=31 Tax=pseudomallei group RepID=Q2T3P2_BURTA Length = 409 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%) Query: 13 GKPYSGPQEVADADGLSVRISPKGVIQFQYRY-RWHGKPNRLGLGRYPSLSLKDARQITA 71 KP ++D GL++ + P G+ +Q+RY + G+ + +G YP ++L+ AR Sbjct: 14 AKPRERVYRLSDGGGLALLVKPNGLKYWQFRYMKPDGREGLIQIGPYPRITLEAARAARN 73 Query: 72 DLRKLYFSGTDPRTYF-EEKVENSMTVAQCLDY 103 + R G DP T +EK + A+ L++ Sbjct: 74 EHRVAVQGGDDPATLRKQEKARRKIDAARALNF 106 >UniRef50_Q144A9 Putative bacteriophage integrase n=1 Tax=Burkholderia xenovorans LB400 RepID=Q144A9_BURXL Length = 444 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 8/103 (7%) Query: 20 QEVADAD-GLSVRISPKGVIQFQYRYRW-HGKPNRLGLGRYPSLSLKDARQITADLRKLY 77 +E+AD G RI+P G I F YRY +G+ R +G YP++++ +AR+ +L + Sbjct: 24 RELADIQKGFGARITPNGAISFYYRYTGSNGRHRRQTIGAYPAMTVSEARRRALELTQEV 83 Query: 78 FSGTDPRTYFEEK------VENSMTVAQCLDYWFDNYVSTTLR 114 D + K E++ V +D + D + LR Sbjct: 84 EHSNDTASEIVRKRERAHRTEHAAKVVPTIDGFIDGHYGKRLR 126 >UniRef50_B9R4Q2 Site-specific recombinase, phage integrase family protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R4Q2_9RHOB Length = 434 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 3/73 (4%) Query: 14 KPYSGPQEVADAD--GLSVRISPKGVIQFQYRYR-WHGKPNRLGLGRYPSLSLKDARQIT 70 KP + QE+ D GL +R +P + + RY GK R+ +GRYP++SL DAR Sbjct: 15 KPTATRQELRDTKVPGLILRCTPSNIKSWSLRYADVTGKHVRMTIGRYPAVSLSDARTAA 74 Query: 71 ADLRKLYFSGTDP 83 + +G DP Sbjct: 75 LQVLAEVSTGKDP 87 >UniRef50_Q1GLB2 Phage integrase n=12 Tax=Rhodobacterales RepID=Q1GLB2_SILST Length = 411 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 27 GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTY 86 G VR+ P G +Q +YR G+ R+ +GR+ +++ +AR++ ++ G +P Sbjct: 47 GFGVRVMPSGAKTYQAQYRKGGRTRRVSVGRHGKITVDEARKLAKEIMGQVAKGENPAEE 106 Query: 87 FEEKVENSMTVAQCLDYWFDNYV 109 + + TVA + +F+ + Sbjct: 107 ISQH-RKAPTVAALCERFFEAHA 128 >UniRef50_C4LB72 Integrase family protein n=9 Tax=Gammaproteobacteria RepID=C4LB72_TOLAT Length = 433 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 28 LSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYF 87 L VR++ G F YRY GK + LG +P++SL +A Q T + L +G DP+ Sbjct: 36 LGVRVNTSGEKVFIYRYFVDGKTRFIQLGLFPAMSLDEAGQKTREFAGLLKAGLDPKNEL 95 Query: 88 E 88 E Sbjct: 96 E 96 >UniRef50_A4SSF4 Phage integrase n=3 Tax=Proteobacteria RepID=A4SSF4_AERS4 Length = 404 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 1 MAISDTKLRTIY--GKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRY 58 M ++D R GKP ++AD GL + ++ G ++ +YR GK +L LG Y Sbjct: 1 MPLTDITARQAKWSGKPNG--DKLADEKGLFLLVNKSGKY-WKLKYRHGGKEKKLALGVY 57 Query: 59 PSLSLKDARQITADLRKLYFSGTDP 83 P +SL++AR + R++ G DP Sbjct: 58 PEVSLREARAKRDEARRVIAEGIDP 82 >UniRef50_UPI00019048C6 phage integrase n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019048C6 Length = 174 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D ++R K P ++ D GL + +S G ++ Y + GK L LG YP+ Sbjct: 1 MALTDVQIRN--AKKSEKPYKLPDGKGLYLYVSTAGGKSWRLDYAYFGKRKTLTLGAYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDP 83 + L +AR + +K G DP Sbjct: 59 IGLAEARSRRDEAKKKLSEGLDP 81 >UniRef50_A1U0R6 Phage integrase family protein n=2 Tax=Gammaproteobacteria RepID=A1U0R6_MARAV Length = 432 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Query: 22 VADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGT 81 V GL +RI+P G Q+ R + + +GLG YP +SL AR ++++ SG Sbjct: 34 VGGVSGLLLRITPSGSRQWILRAKVGNRRPDMGLGPYPEISLAQARDKAREMKEKIRSGI 93 Query: 82 DPRTYFEEK 90 DP EEK Sbjct: 94 DP---LEEK 99 >UniRef50_A9I0E1 Phage-related integrase n=5 Tax=Burkholderiales RepID=A9I0E1_BORPD Length = 536 Score = 42.4 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +S+T+++ KP + D D L +R+ G + YRY KP +LG+G YP ++ Sbjct: 103 LSETQIKA--AKPGQKEYMLNDGDNLYLRVRITGK-AWIYRYMKDSKPIKLGMGPYPEVT 159 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENS 94 L AR + +G DP+ E+ E + Sbjct: 160 LAQARTKAYEANSQRANGLDPKEVREQLAEQT 191 >UniRef50_A7JZW2 Site-specific recombinase, phage integrase family protein n=2 Tax=Vibrio sp. Ex25 RepID=A7JZW2_VIBSE Length = 471 Score = 42.4 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Query: 22 VADADGLSVRISPKGVIQFQYRYRWHG--KPNRLGLGRYPSLSLKDARQITADLRKLYFS 79 ++D L +RI G + + Y K ++GLG YP+++L + R++ +LRK Sbjct: 46 LSDGGNLYLRIRKNGSKNWLFIYTDFSTKKRKKMGLGSYPNMTLDEVRKVAKELRKQMTK 105 Query: 80 GTDPRTYFEEKVENSMTVAQ 99 G DP+ + E++ + + +Q Sbjct: 106 GIDPKLFREKQKLDRLVESQ 125 >UniRef50_B8GNQ7 Phage integrase family protein n=6 Tax=Proteobacteria RepID=B8GNQ7_THISH Length = 422 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 2/81 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +S K+ TI + P + D L + ++P G ++YRYR GKP +G+YP +S Sbjct: 6 LSARKVETIPSQ--KEPYWLKDGGSLFLYVTPSGSKLWRYRYRLGGKPAIYAIGKYPQVS 63 Query: 63 LKDARQITADLRKLYFSGTDP 83 L+ AR R+L G P Sbjct: 64 LEAARTERDRARELVKKGVHP 84 >UniRef50_B7I7W7 Integrase n=4 Tax=Pseudomonadales RepID=B7I7W7_ACIB5 Length = 427 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 8/119 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR-WHGKPNRLGLGRYPSL 61 +SDT L + +P S D +GL R+ P G + +RY+ GK + LG+G YP L Sbjct: 29 LSDTVLANL--EPESKEYRELDGEGLYFRVKPDGKKAWLFRYKKADGKWSWLGIGTYPEL 86 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTTLRE 115 S AR+ ++ K G +P +E+ +N+ T W D +T +++ Sbjct: 87 SGAGARKKAREIIKDISQGDNPIITKQERKRQELEQNNATFEVLAREWLDTKANTWVKD 145 >UniRef50_Q4QNN7 Prophage CP4-57-like integrase n=4 Tax=Haemophilus influenzae RepID=Q4QNN7_HAEI8 Length = 403 Score = 42.4 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query: 5 DTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYPSLS 62 DT+++ K + P + D GL + ISP G +++ Y K ++ LG YP+++ Sbjct: 10 DTEIKK--AKASNKPYTLTDGYGLFLIISPTGSKSWRFNYYRPITKKRAKISLGLYPAIT 67 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEE 89 L AR++ R+L + DP+ Y ++ Sbjct: 68 LSKARELREQYRQLLANKIDPQEYIKQ 94 >UniRef50_D0CDZ4 DNA integration/recombination/inversion protein n=4 Tax=Acinetobacter RepID=D0CDZ4_ACIBA Length = 402 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 21 EVADADGLSVRISPKGVIQ--FQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYF 78 +++D L +RI G F Y + GK N L LG YP +SL+DAR I +KL Sbjct: 26 KLSDGGNLYLRIDQSGSKYWIFNYTRPFLGKRNDLSLGTYPEVSLEDARTIRDKYKKLIK 85 Query: 79 SGTDP 83 G DP Sbjct: 86 QGIDP 90 >UniRef50_Q7MKK6 Integrase n=6 Tax=Proteobacteria RepID=Q7MKK6_VIBVY Length = 402 Score = 42.0 bits (97), Expect = 0.005, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 27 GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTY 86 G RISPKGVI++ YR HGK LG +L+ AR + + +G D + Sbjct: 29 GFHARISPKGVIKYYLYYRIHGKQRNFLLGSANALTPAQARDLAKEKAGQVAAGEDVQDT 88 Query: 87 FEE----KVENSMTVAQCLDYWFDNYV 109 E + NS+T+++ L+ + Y+ Sbjct: 89 RHEAKKREQRNSLTLSKFLEEHYSAYL 115 >UniRef50_A1WQF8 Phage integrase family protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQF8_VEREI Length = 419 Score = 42.0 bits (97), Expect = 0.005, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 10/119 (8%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQ----YRYRWHGKPNRLGLGRY 58 ++D LR +GP + GL+ + G ++ Q RYR+ G LGRY Sbjct: 7 VTDKTLRAWLN---TGPVDRGIGGGLTFVATAAGALKGQASWILRYRFGGGAREKVLGRY 63 Query: 59 PSLSLKDARQITADLRKLYFSGTD---PRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 P LSLKDAR+ T R G D + K + VA W+D +++ T + Sbjct: 64 PDLSLKDAREATRQNRARIQQGVDVAAEKRAERLKAHEQVAVAALAQAWYDRHIAKTYK 122 >UniRef50_B5JBP0 Site-specific recombinase, phage integrase family protein n=2 Tax=Octadecabacter antarcticus RepID=B5JBP0_9RHOB Length = 433 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%) Query: 27 GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTY 86 G +RI+ G F Y GK R +G +P+ +L+ AR + +R+ +G+DP Sbjct: 35 GFGLRITSAGGKAFVLAYAVEGKQRRATIGSWPTWTLEAARAEASQMRRNIDAGSDP--- 91 Query: 87 FEEKVENSM--TVAQCLDYWFDNYVS 110 EEK + TVA W D + + Sbjct: 92 LEEKRTRKIEPTVADLASDWLDVHAT 117 >UniRef50_Q1LLV0 Site specific recombinase n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LLV0_RALME Length = 279 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%) Query: 20 QEVADA--DGLSVRISPKGVIQFQYRYRW-HGKPNRLGLGRYPSLSLKDARQITADLRKL 76 QE AD+ G VR++P G IQ+ RYR GK R +G YP+++ AR+ D +L Sbjct: 25 QEYADSTLSGFGVRVTPAGAIQYTLRYRKPDGKFGRTKIGTYPAMTATQARKAAKDQLEL 84 Query: 77 YFSGTDPRTYFEEK 90 D + E+ Sbjct: 85 TDRKGDALSVLAER 98 >UniRef50_A7JSX8 Bacteriophage integrase n=3 Tax=Pasteurellaceae RepID=A7JSX8_PASHA Length = 413 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 7/73 (9%) Query: 22 VADADGLSVRISP--KGVIQFQYRYRWHGKPNR--LGLGRYPSLSLKDARQITADLRKLY 77 ++D DGL++R+ P KG + + Y NR L +GRYP ++L +AR I R L Sbjct: 25 LSDGDGLNLRVKPLPKGSKIWIFNYTNPQTKNRTNLTIGRYPLITLAEARTICDGYRSLI 84 Query: 78 FSGTDPRTYFEEK 90 G DP+ EEK Sbjct: 85 EKGIDPQ---EEK 94 >UniRef50_Q0A9S4 Phage integrase family protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A9S4_ALHEH Length = 464 Score = 41.6 bits (96), Expect = 0.007, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 14/105 (13%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADG--LSVRISPKGVIQF-QYRYRWHGKPNR------ 52 I+ KL + GK D DG V++S G + F Q+ Y G ++ Sbjct: 5 GITAKKLEALQGKRRKSATREWDGDGSGFGVKVSAAGRLTFFQFYYSPEGTTDKDGNDIT 64 Query: 53 -----LGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVE 92 +GLG YP +L +AR+ + R+L G DP+ + E+ E Sbjct: 65 GKRRFMGLGNYPETTLAEAREKAQEARELLERGIDPQEHAREQQE 109 >UniRef50_B5K270 Integrase n=1 Tax=Octadecabacter antarcticus 238 RepID=B5K270_9RHOB Length = 389 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Query: 27 GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTY 86 GL + ++P G F R G+P RL LG++P L++++AR++ A + G +P+ Sbjct: 34 GLVLAVTPAGGKSFYLYKRIDGRPERLLLGKFPDLTVENARKLAASAKGEIAMGENPQKA 93 Query: 87 FEEKVENSMTVAQCLDYWFDNYVSTTLR 114 + + + MT + + + R Sbjct: 94 -KRSIRDEMTFGALFTEYLEKHSKVHKR 120 >UniRef50_Q5P749 Similar to phage-related integrase n=3 Tax=Bacteria RepID=Q5P749_AZOSE Length = 411 Score = 41.6 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 27 GLSVRISPKGVIQFQ-YRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDP 83 GL +R+S GV F YR G+P R+ LG++P+++++ AR+ A + SG +P Sbjct: 36 GLQLRVSATGVKSFSVYRRLKAGQPERVTLGKFPAMTVEQARKAAALVNAEIESGANP 93 >UniRef50_C8NCE3 Phage integrase family site-specific recombinase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCE3_9GAMM Length = 401 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG--KPNRLGLGRY 58 MA+++T+ RT P ++ D GL ++++ G ++ YR G K + G Y Sbjct: 1 MALTETQCRTA-AAPDKNVRKYFDGGGLCLQVTSDGKKYWRLYYRMPGSKKQQTVSFGVY 59 Query: 59 PSLSLKDARQITADLRKLYFSGTDPR 84 P +SLK ARQ +++ L G DP+ Sbjct: 60 PKVSLKQARQRRDEVKLLIARGIDPK 85 >UniRef50_Q21D10 Phage integrase n=3 Tax=Alphaproteobacteria RepID=Q21D10_RHOPB Length = 429 Score = 41.6 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 35/61 (57%) Query: 23 ADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTD 82 AD GL ++I+ G + +RY+ HG+ + GLG + L++AR+ RK+ +G D Sbjct: 23 ADGGGLYLQIAEGGSKSWLFRYKLHGRTHWHGLGSLRDVGLEEAREKATGARKVRRNGGD 82 Query: 83 P 83 P Sbjct: 83 P 83 >UniRef50_B1FYC4 Phage integrase n=2 Tax=Burkholderia RepID=B1FYC4_9BURK Length = 231 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRY-PSL 61 ++D +LR + KP ++AD L ++P G + F+Y YR +G+ L +GRY PSL Sbjct: 2 LTDMQLRAL--KPAQKIFKIADQRWLYAAVTPSGTVSFRYDYRVNGRRETLVIGRYDPSL 59 Query: 62 SLKDARQ 68 S + R+ Sbjct: 60 SARRPRR 66 >UniRef50_C6BFQ2 Integrase family protein n=4 Tax=Betaproteobacteria RepID=C6BFQ2_RALP1 Length = 412 Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Query: 27 GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTY 86 GL++ I GV F + + KP R+ +GRYP L+++ AR L +GT+P Sbjct: 40 GLAIGIGASGVRTFVLYRKVNRKPERIKIGRYPDLTVEKARTQAMALNGEIATGTNP-AE 98 Query: 87 FEEKVENSMTVAQCLDYWFDNY 108 + MT D ++ N+ Sbjct: 99 LKRIRRAEMTFGDLFDQYYKNH 120 >UniRef50_A9N695 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 RepID=A9N695_SALPB Length = 126 Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 30/52 (57%) Query: 32 ISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDP 83 ++P G + ++R+ K NR+ LG YP +SL R+ AD R+L G +P Sbjct: 1 MNPSGSKLWYLKFRFGNKENRMALGPYPLISLALVREKQADRRRLILEGINP 52 >UniRef50_A4A7S2 Phage-related integrase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A7S2_9GAMM Length = 412 Score = 41.6 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 32/60 (53%) Query: 24 DADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDP 83 DA+GL + ++ G + YRY+ G+ LGLG YP++SL AR R G DP Sbjct: 24 DAEGLYLLVARGGSKNWIYRYQHEGRRRELGLGGYPAVSLAKARMRRDAARDQRQQGHDP 83 >UniRef50_A3UV17 Phage integrase n=1 Tax=Vibrio splendidus 12B01 RepID=A3UV17_VIBSP Length = 444 Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 14/101 (13%) Query: 27 GLSVRISPKGVIQFQYRYRW---HGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDP 83 GL + G F YRYR GK ++ LG +P +SL+ AR +++ + G P Sbjct: 33 GLRIACGKTGRKTFTYRYRSPESGGKLVQIKLGIFPDMSLEQARIKLREMKAIRERGICP 92 Query: 84 RTYFEEKVE-----------NSMTVAQCLDYWFDNYVSTTL 113 + E + + NS+T+ +D++ +NY+ L Sbjct: 93 KADLERQEQERRKLLKTERVNSITLKDVIDHYLENYIQDRL 133 >UniRef50_Q4QL03 Prophage CP4-57-like integrase n=11 Tax=Haemophilus RepID=Q4QL03_HAEI8 Length = 419 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Query: 13 GKPYSGPQEVADADGLSVRISPKG--VIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQIT 70 KP ++D GL + + G + +FQY K + LG YP +SLKDAR+I Sbjct: 20 AKPKEKDYSLSDGQGLFLLVKMNGSKIWRFQYYKPISKKRTLISLGVYPEISLKDAREIR 79 Query: 71 ADLRKLYFSGTDPRTY 86 R L DP+ Y Sbjct: 80 DLYRSLLAKNIDPQDY 95 >UniRef50_Q5P855 Phage integrase n=5 Tax=Proteobacteria RepID=Q5P855_AZOSE Length = 432 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 3/90 (3%) Query: 24 DADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDP 83 + G +R+SP G + + + R HG+ R+ +G + ++ AR++ + + G DP Sbjct: 27 EVKGFGLRVSPTGKVSYLMQGRVHGRSARITIGPHGVFTVDQAREVAREHLRSMRMGIDP 86 Query: 84 RTYFEEK---VENSMTVAQCLDYWFDNYVS 110 R ++K E L D YVS Sbjct: 87 REVAKQKKATAEAEAVAGVTLQEVCDAYVS 116 >UniRef50_Q1QLT5 Phage integrase n=2 Tax=Alphaproteobacteria RepID=Q1QLT5_NITHX Length = 416 Score = 41.2 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 2/81 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DT +R KP P ++AD+ GL + +S G +++RYR+ K L +G YP +S Sbjct: 7 LTDTAIRK--AKPGDKPFKMADSGGLHLYVSTAGGKLWRFRYRYADKEKLLTIGPYPDIS 64 Query: 63 LKDARQITADLRKLYFSGTDP 83 L DAR + G DP Sbjct: 65 LVDARAARDAAKASLRDGRDP 85 >UniRef50_A1W8P6 Phage integrase family protein n=4 Tax=Comamonadaceae RepID=A1W8P6_ACISJ Length = 413 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D + + P D+ GL + +SP G ++ ++ + GK R+ LG YP+ S Sbjct: 2 LTDKQCKNAICPPDKKRARFTDSLGLYLEVSPSGSKRWFWKTYFDGKEGRMALGSYPTQS 61 Query: 63 LKDARQITADLRKLYFS-GTDP 83 L DAR+ D+ KL + G DP Sbjct: 62 LADARK-ARDIAKLKKADGVDP 82 >UniRef50_Q6LTT6 Hypothetical integrase n=1 Tax=Photobacterium profundum RepID=Q6LTT6_PHOPR Length = 446 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 20/105 (19%) Query: 28 LSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYF 87 L V++ P G F +RY KP + +G++P++SL DAR+ ++ G DP+ Sbjct: 31 LGVKVQPSGSKSFYFRYYKDLKPVFILIGKFPAVSLSDAREKAKIYGAMWSDGKDPKIEL 90 Query: 88 E---EKVENSM--------------TVAQCLDYWFDNYVSTTLRE 115 + E++E +V Q LD + + V LRE Sbjct: 91 QAERERIEQETVKLKAQQEAEKRQGSVGQLLDSYINELV---LRE 132 >UniRef50_A0YCY6 Integrative genetic element Gsu32, integrase, putative n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCY6_9GAMM Length = 416 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 3/92 (3%) Query: 27 GLSVRISPKGVIQFQYRYRW-HGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRT 85 GL + G + YRY+ G ++ LG +P++SL DAR L++L SGTDPR Sbjct: 30 GLRLVARDTGKKTWIYRYKSDSGTTKQIRLGHFPAMSLADARSELGVLKELRNSGTDPRE 89 Query: 86 YFEEKVENSM--TVAQCLDYWFDNYVSTTLRE 115 +K E + + FD V L E Sbjct: 90 SAAKKKEQRRLDAIVDTGPFTFDKMVDVYLSE 121 >UniRef50_B8F555 CP4-57 prophage, integrase n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F555_HAEPS Length = 405 Score = 41.2 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 4/97 (4%) Query: 5 DTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRW--HGKPNRLGLGRYPSLS 62 DT+++ K P + D GL + +S G +++ Y K ++ LG YP+++ Sbjct: 10 DTEIKK--AKAKDKPYTLTDGGGLFLLVSITGSKSWRFNYYQPITKKRTKMALGMYPTVN 67 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQ 99 L AR + + +KL DP+ Y + K + + Q Sbjct: 68 LSKARALRDEYKKLLADDIDPQQYIKNKQQEKLQETQ 104 >UniRef50_Q1NEP8 Putative integrase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEP8_9SPHN Length = 156 Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 38/84 (45%) Query: 21 EVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSG 80 ++ D GL + + P G ++ Y + GK L G +P + L DAR+ + RKL +G Sbjct: 36 KLTDGAGLYLLVKPNGRKLWRLNYAYLGKQRTLSFGAWPDVGLADARERRDEARKLIAAG 95 Query: 81 TDPRTYFEEKVENSMTVAQCLDYW 104 DP + +M + W Sbjct: 96 LDPSHEAKLAEARAMLSEETASSW 119 >UniRef50_D2MI75 Phage integrase family protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MI75_9BACT Length = 398 Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Query: 19 PQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYF 78 P D L +++SP G + R+ GK + +GLG +P +SL++AR+ D R+ Sbjct: 15 PGLYGDGGTLFLKVSPGGSKSWVQRFTIKGKRHDVGLGGWPVVSLQEARERAFDNRRAVA 74 Query: 79 SGTDPRTYFEEKVENSMTVA 98 G DP EK + S A Sbjct: 75 HGRDP---LAEKQKASKAAA 91 >UniRef50_Q93UI5 Integrase-like gene 1 n=1 Tax=Escherichia coli RepID=Q93UI5_ECOLX Length = 401 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 10/112 (8%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D K+R++ + P AD G+ ++I+ G ++ +YR GK L G YP Sbjct: 1 MPLTDLKVRSL-----TTPGRYADGGGMYLQITASGGRYWRMKYRHGGKEKLLAFGVYPL 55 Query: 61 LSLKDARQITADLRKLYFSGTDP-----RTYFEEKVENSMTVAQCLDYWFDN 107 + +K+AR ++ G DP F+ + + + T + W D+ Sbjct: 56 VGIKEARDKLFYAKQALSRGEDPGATKKLAKFQAEQDAANTFKAVAEDWLDH 107 >UniRef50_Q39TC0 Phage integrase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TC0_GEOMG Length = 414 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 28/53 (52%) Query: 33 SPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRT 85 +PKG F Y Y +GK L LG YP ++LKDAR + +G DP T Sbjct: 39 NPKGTKTFLYIYTINGKRKELKLGNYPEVTLKDARIKHGEAYARLVNGEDPVT 91 >UniRef50_B6QXT6 Phage integrase n=2 Tax=Pseudovibrio sp. JE062 RepID=B6QXT6_9RHOB Length = 416 Score = 40.8 bits (94), Expect = 0.014, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Query: 27 GLSVRISPKGVIQFQYRYRWH-GKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRT 85 G +++ P G F +YR H G+ R+ LGRY L+ AR + ++ +G DP Sbjct: 28 GFGLQVMPSGAKTFIVQYRTHEGRSRRMSLGRYGELTPDQARDLATNVLATVRNGDDPLL 87 Query: 86 YFEEKVENSMTVAQCLDYWFDNYV 109 E K + TV LD + +V Sbjct: 88 KRENK-RAAPTVNVLLDIYMSKHV 110 >UniRef50_C6RGV6 Phage integrase n=3 Tax=Campylobacter RepID=C6RGV6_9PROT Length = 407 Score = 40.8 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 9/111 (8%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPS 60 + DT++R K + D GL++ I+ KGV + + Y GK G G YP Sbjct: 20 LKDTQIRKAIKK--EKDYSLTDGGGLAILITSKGVKGWVFYYIDPVSGKKCSAGFGLYPD 77 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFD 106 ++L AR++ A+ + L G P+ + ++ E + T ++ + W + Sbjct: 78 ITLARARELRAEYKSLISQGISPKEHKKQAREQRQSDHKQTFSKVFNEWLE 128 >UniRef50_Q3SUE5 Phage integrase n=6 Tax=Alphaproteobacteria RepID=Q3SUE5_NITWN Length = 400 Score = 40.8 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 1/84 (1%) Query: 27 GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTY 86 G VRI+ G F YR + RL +G +P S+ AR+ L++ G DP Sbjct: 29 GFGVRITSGGTRAFILTYRIEARERRLTIGAWPDWSVTAAREEAKRLKREIDQGRDPMAE 88 Query: 87 FEEKVENSMTVAQCLDYWFDNYVS 110 +E E S V Q +D + + + S Sbjct: 89 RDEARE-SPNVRQLIDRYLEEHAS 111 >UniRef50_A6F6W3 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F6W3_9GAMM Length = 401 Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust. Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Query: 21 EVADAD--GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYF 78 EV+D + GL G +F RY+++G+ + +GR+P + + AR++ + + Sbjct: 36 EVSDTEIIGLKCLSGKTGNKRFLLRYKFNGRKCSITIGRFPDIDINQARKVARKYKGMIA 95 Query: 79 SGTDPRTYFEEKVE 92 G DP+ + +V+ Sbjct: 96 DGVDPKAERDNQVD 109 >UniRef50_UPI00003841F3 COG0582: Integrase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003841F3 Length = 394 Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 31/61 (50%) Query: 23 ADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTD 82 AD G +R++ +G F YR G+ R+ +G YP S+ AR +L++ G D Sbjct: 26 ADVKGFGLRVTNRGAKSFILDYRIGGRQRRITIGSYPDWSVAAARTEAGNLKREVDLGND 85 Query: 83 P 83 P Sbjct: 86 P 86 >UniRef50_C6XJP3 Integrase family protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJP3_HIRBI Length = 395 Score = 40.4 bits (93), Expect = 0.016, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 29/52 (55%) Query: 23 ADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLR 74 +D GL + + G + + YRW K +GLG YPS+SL +AR+ A R Sbjct: 23 SDGGGLYLNVKQTGARNWLFIYRWGDKRPSIGLGGYPSVSLSEARKQAAMCR 74 >UniRef50_C3NXV5 Phage Integrase n=17 Tax=Vibrio RepID=C3NXV5_VIBCJ Length = 334 Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 52 RLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-MTVAQCLDYWFDNYVS 110 R+ LG YP++ L+DA Q +L G DPR ++S +T+ +DYW +N+ Sbjct: 3 RIKLGEYPAMKLRDAIQARESRAELVELGFDPRKSTRSANDDSIITLNDLIDYWAENHAR 62 Query: 111 TTLRE 115 +++ Sbjct: 63 DNIKQ 67 >UniRef50_B3R9I1 Prophage INTEGRASE PROTEIN n=1 Tax=Cupriavidus taiwanensis RepID=B3R9I1_CUPTR Length = 412 Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%) Query: 22 VADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLY-FSG 80 +AD +GL +R+ P G F RY G LG +P + + AR+ +++R+L Sbjct: 21 IADGEGLYLRLEPSGTKTFCLRYTVAGSRKLKVLGTFPDMDIAAARKQASEMRELLEVHD 80 Query: 81 TDPRTYFE-EKVENSMTVAQCLDYWFDNY 108 + P E + + + +TVAQ W Y Sbjct: 81 SLPSASKEVDALTSPITVAQLATEWEMRY 109 >UniRef50_D2LKM4 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKM4_RHOVA Length = 423 Score = 40.4 bits (93), Expect = 0.019, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 3/99 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADAD-GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 MAI + L KP EV+D + GL V + P G F RYR + ++ LG Sbjct: 1 MAIKLSSLSVTALKPKEKRYEVSDMETGLGVVVQPSGAKSFVVRYRLGKRLGKVTLGSAS 60 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVA 98 ++L AR+ L G DP + K E + +A Sbjct: 61 DITLAAAREQARQTMALVRQGIDPAEH--RKTEKAARIA 97 >UniRef50_A6FV67 Hypothetical integrase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FV67_9RHOB Length = 426 Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 8/99 (8%) Query: 3 ISDTKLRTIYGKPYSGPQEVADAD----GLSVRISPKGVIQF--QYRYRWHGKPNRLGLG 56 ++D +R KP + + DA+ G V ++P G F + GK ++ LG Sbjct: 2 LTDKAIRD--AKPKASAYRLRDANVVTRGFGVTVAPSGAKSFFLSFTSPEDGKRKQVALG 59 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM 95 R+P +SL++AR A++R G DP + + N + Sbjct: 60 RFPKMSLREARLRAAEVRAEVDDGKDPAIEKRQAITNRI 98 >UniRef50_Q13W63 Putative phage integrase n=2 Tax=Burkholderia RepID=Q13W63_BURXL Length = 454 Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 14/106 (13%) Query: 14 KPYSGPQEVADADGL--SVRISPKGV-IQFQYRYRWHGKPNRLGLGRYPSLSLKDARQIT 70 KP + D G+ VR + GV + F YRY+W K +G +P+ SL R+ Sbjct: 14 KPADIGTTIRDEGGIWGRVRKAGDGVSVTFWYRYKWQAKTRDTAIGTWPAASLPKIRKNR 73 Query: 71 ADLRKLYFSGTDPRTYFE------EKVE-----NSMTVAQCLDYWF 105 R L G DP E E E ++TV+ D WF Sbjct: 74 DAARALVKDGRDPNEQREIDRRDREAAEALRKAEALTVSDLYDAWF 119 >UniRef50_Q8DF52 Phage integrase n=1 Tax=Vibrio vulnificus RepID=Q8DF52_VIBVU Length = 452 Score = 40.0 bits (92), Expect = 0.021, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 6/73 (8%) Query: 20 QEVADADGLSVRI------SPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADL 73 Q ++D D L +R+ K QF Y + K +L +G YP+L+LKDAR+ + Sbjct: 23 QLISDGDNLYLRLRLGKNKKTKKSWQFNYHHPLTKKRIKLTIGNYPALTLKDARKKAENY 82 Query: 74 RKLYFSGTDPRTY 86 +L DP+ Y Sbjct: 83 LELLEKNIDPQEY 95 >UniRef50_A5ELC2 Putative prophage integrase n=2 Tax=Bradyrhizobium RepID=A5ELC2_BRASB Length = 408 Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 5/96 (5%) Query: 18 GPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLG--RYPSLSLKDARQITADLRK 75 GP E + L + ++P G ++ +RY+ +G ++G G + L L +AR D + Sbjct: 19 GPGEYPCGNNLYLIVTPSGGRRWAFRYQRNGIVKKMGFGSAKETGLKLSEARDKAIDALR 78 Query: 76 LYFSGTDPRTYFEE---KVENSMTVAQCLDYWFDNY 108 L GTDPR + ++ + + S + + W Y Sbjct: 79 LLAKGTDPREHRDDEKRRTQGSRRFGEFAEEWRQTY 114 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C0Z3X8 Integrase (Fragment) n=8 Tax=Enterobacteriaceae ... 157 1e-37 UniRef50_C6UP78 Integrase n=13 Tax=Escherichia coli O157:H7 RepI... 154 1e-36 UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX 149 2e-35 UniRef50_C2LK76 Putative uncharacterized protein n=1 Tax=Proteus... 149 3e-35 UniRef50_B6C134 Putative uncharacterized protein n=1 Tax=Nitroso... 148 4e-35 UniRef50_Q8VQN9 CP4-like integrase n=87 Tax=Enterobacteriaceae R... 145 4e-34 UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp... 145 4e-34 UniRef50_C3K287 Putative phage integrase n=1 Tax=Pseudomonas flu... 144 9e-34 UniRef50_Q2T016 Site-specific recombinase, phage integrase famil... 144 1e-33 UniRef50_Q5P090 Integrase n=1 Tax=Aromatoleum aromaticum EbN1 Re... 143 2e-33 UniRef50_D2L516 Integrase family protein n=1 Tax=Desulfovibrio s... 142 4e-33 UniRef50_C8U7P7 Integrase n=30 Tax=root RepID=C8U7P7_ECO10 140 1e-32 UniRef50_B4X5T7 Site-specific recombinase, phage integrase famil... 140 2e-32 UniRef50_C8UI65 Putative integrase n=1 Tax=Escherichia coli O111... 139 4e-32 UniRef50_C0GR55 Integrase family protein n=1 Tax=Desulfonatronos... 138 5e-32 UniRef50_A9MQQ9 Putative uncharacterized protein n=9 Tax=Salmone... 138 6e-32 UniRef50_D0W4G5 Site-specific recombinase, phage integrase famil... 137 8e-32 UniRef50_A6QCY9 Site-specific recombinase, phage integrase famil... 137 9e-32 UniRef50_Q3JN19 Prophage CP4-like integrase n=62 Tax=Proteobacte... 137 1e-31 UniRef50_C5V4I9 Integrase family protein n=1 Tax=Gallionella fer... 136 2e-31 UniRef50_B1JDS4 Integrase family protein n=3 Tax=Pseudomonadacea... 136 3e-31 UniRef50_A3UDD1 Symbiosis island integrase n=1 Tax=Oceanicaulis ... 136 3e-31 UniRef50_Q8W6M6 Putative uncharacterized protein orf1 n=1 Tax=Si... 136 3e-31 UniRef50_Q0BEM8 Phage integrase family protein n=4 Tax=Burkholde... 136 3e-31 UniRef50_UPI0001AF6377 prophage PSPPH01, site-specific recombina... 135 4e-31 UniRef50_UPI0000E0FEDC DNA integration/recombination/inversion p... 135 5e-31 UniRef50_B5QDA8 Phage integrase family protein n=1 Tax=Salmonell... 135 6e-31 UniRef50_Q0AH02 Phage integrase family protein n=2 Tax=Nitrosomo... 134 6e-31 UniRef50_B0C8U1 Phage integrase family protein n=1 Tax=Acaryochl... 134 6e-31 UniRef50_A5PEV9 Symbiosis island integrase (Fragment) n=2 Tax=Er... 134 9e-31 UniRef50_B5AXB8 Putative integrase n=1 Tax=Escherichia coli RepI... 134 1e-30 UniRef50_A5EQ25 P4-like integrase n=1 Tax=Bradyrhizobium sp. BTA... 133 1e-30 UniRef50_B6WV41 Putative uncharacterized protein n=1 Tax=Desulfo... 133 2e-30 UniRef50_D0KY10 Integrase family protein n=1 Tax=Halothiobacillu... 133 2e-30 UniRef50_A3M3W1 Phage integrase n=4 Tax=Acinetobacter baumannii ... 133 2e-30 UniRef50_Q2NQD5 Putative phage integrase n=1 Tax=Sodalis glossin... 132 2e-30 UniRef50_A3M8S0 Putative integrase n=1 Tax=Acinetobacter baumann... 132 3e-30 UniRef50_Q0C1T8 Site-specific recombinase, phage integrase famil... 132 3e-30 UniRef50_B5F474 Integrase n=26 Tax=Proteobacteria RepID=B5F474_S... 132 4e-30 UniRef50_C7I2C4 Putative integrase n=1 Tax=Thiomonas intermedia ... 131 6e-30 UniRef50_UPI00016B13C2 phage integrase family protein n=1 Tax=Bu... 131 6e-30 UniRef50_Q48NQ4 Prophage PSPPH01, site-specific recombinase, pha... 131 6e-30 UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomon... 131 7e-30 UniRef50_Q0P7K9 Bacteriophage integrase n=8 Tax=Enterobacteriace... 130 9e-30 UniRef50_C8R2J0 Integrase family protein n=1 Tax=Desulfurivibrio... 130 1e-29 UniRef50_C7SIL5 Integrase B n=113 Tax=Gammaproteobacteria RepID=... 130 2e-29 UniRef50_A1BGX1 Phage integrase family protein n=25 Tax=root Rep... 130 2e-29 UniRef50_UPI00016B0CE6 putative integrase n=1 Tax=Burkholderia p... 129 2e-29 UniRef50_C0VMW7 Phage integrase n=2 Tax=Acinetobacter RepID=C0VM... 129 2e-29 UniRef50_B6WTC3 Putative uncharacterized protein n=1 Tax=Desulfo... 129 2e-29 UniRef50_Q5P707 Phage-related integrase n=2 Tax=Proteobacteria R... 129 3e-29 UniRef50_C1M393 Bacteriophage integrase n=1 Tax=Citrobacter sp. ... 129 3e-29 UniRef50_C8KXV2 Prophage CP4-57-like integrase n=1 Tax=Actinobac... 128 4e-29 UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IG... 128 5e-29 UniRef50_Q3SHC8 Probable cp4-like integrase protein n=1 Tax=Thio... 128 6e-29 UniRef50_C8T7N5 Phage integrase family site-specific recombinase... 128 6e-29 UniRef50_C4U2J7 Phage integrase family protein n=1 Tax=Yersinia ... 128 7e-29 UniRef50_D2LIX3 Integrase family protein n=1 Tax=Rhodomicrobium ... 128 7e-29 UniRef50_UPI00016954D2 DNA integration/recombination/inversion p... 127 8e-29 UniRef50_B0RRY6 Complete genome, strain B100 n=3 Tax=Proteobacte... 127 8e-29 UniRef50_A8EWJ5 Phage integrase n=1 Tax=Arcobacter butzleri RM40... 127 9e-29 UniRef50_Q167M4 CP4-like integrase, putative n=40 Tax=Alphaprote... 127 1e-28 UniRef50_C0N6F7 Site-specific recombinase, phage integrase famil... 127 1e-28 UniRef50_B8L9U1 Phage integrase family protein n=1 Tax=Stenotrop... 127 1e-28 UniRef50_B8EF22 Integrase family protein n=3 Tax=Shewanella balt... 127 1e-28 UniRef50_B5F8X4 Integrase n=1 Tax=Salmonella enterica subsp. ent... 126 2e-28 UniRef50_B9Z434 Integrase family protein n=2 Tax=Neisseriaceae R... 126 2e-28 UniRef50_B0RMR5 Prophage integrase n=3 Tax=Xanthomonas campestri... 126 2e-28 UniRef50_A6SWC6 Prophage integrase n=1 Tax=Janthinobacterium sp.... 126 2e-28 UniRef50_Q6LJV6 Hypothetical site-specific recombinase, phageint... 126 2e-28 UniRef50_P32053 Prophage CP4-57 integrase n=104 Tax=Gammaproteob... 126 2e-28 UniRef50_A6VC70 Integrase n=11 Tax=Proteobacteria RepID=A6VC70_P... 126 2e-28 UniRef50_Q2YCS6 Putative uncharacterized protein n=1 Tax=Nitroso... 126 2e-28 UniRef50_P08320 Integrase n=31 Tax=root RepID=VINT_BPP4 126 2e-28 UniRef50_D0BVL9 Phage integrase n=2 Tax=Acinetobacter RepID=D0BV... 125 3e-28 UniRef50_Q8ECV9 Site-specific recombinase, phage integrase famil... 125 4e-28 UniRef50_A1SRI6 Phage integrase family protein n=2 Tax=Alteromon... 125 4e-28 UniRef50_Q1R2C9 Integrase-like protein n=9 Tax=root RepID=Q1R2C9... 125 6e-28 UniRef50_C3XC22 Integrase n=3 Tax=Oxalobacter formigenes RepID=C... 124 6e-28 UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio R... 124 7e-28 UniRef50_A4JAY4 Phage integrase family protein n=22 Tax=Bacteria... 124 7e-28 UniRef50_B9MGW9 Integrase family protein n=1 Tax=Diaphorobacter ... 124 7e-28 UniRef50_P37317 Integrase n=42 Tax=root RepID=VINT_BPSFV 124 7e-28 UniRef50_Q1N9F3 Putative integrase prophage protein n=1 Tax=Sphi... 124 8e-28 UniRef50_A5PCI3 Phage integrase n=1 Tax=Erythrobacter sp. SD-21 ... 124 8e-28 UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepI... 124 9e-28 UniRef50_A5EUW8 Bacteriophage P4-like integrase n=3 Tax=root Rep... 124 1e-27 UniRef50_P06155 Integrase n=9 Tax=root RepID=VINT_BPPH8 124 1e-27 UniRef50_A7MWW9 Putative uncharacterized protein n=1 Tax=Vibrio ... 124 1e-27 UniRef50_B3A9A3 Prophage integrase n=2 Tax=Escherichia coli O157... 124 1e-27 UniRef50_C6RLT7 Phage integrase n=2 Tax=Acinetobacter radioresis... 123 1e-27 UniRef50_A1TYD6 Phage integrase family protein n=1 Tax=Marinobac... 122 2e-27 UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella Rep... 122 3e-27 UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804... 122 4e-27 UniRef50_A6Q4N1 Site-specific recombinase, phage integrase famil... 122 4e-27 UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria ... 122 4e-27 UniRef50_A4F5J8 Putative uncharacterized protein n=1 Tax=uncultu... 122 4e-27 UniRef50_C6E138 Integrase family protein n=1 Tax=Geobacter sp. M... 121 6e-27 UniRef50_D0SJJ0 Phage integrase n=6 Tax=Acinetobacter RepID=D0SJ... 120 9e-27 UniRef50_A1WLK0 Phage integrase family protein n=4 Tax=Burkholde... 120 1e-26 UniRef50_Q5E028 Phage family integrase n=2 Tax=Vibrionaceae RepI... 120 1e-26 UniRef50_A6F4S5 Putative integrase n=1 Tax=Marinobacter algicola... 120 1e-26 UniRef50_B4RZR6 Prophage CP4-like integrase n=2 Tax=Proteobacter... 120 2e-26 UniRef50_C3NUM0 Phage Integrase n=55 Tax=root RepID=C3NUM0_VIBCJ 119 2e-26 UniRef50_A3ZAX6 Prophage CP4-like integrase n=2 Tax=Synechococcu... 119 2e-26 UniRef50_B1Y4T5 Integrase family protein n=3 Tax=Betaproteobacte... 119 3e-26 UniRef50_B7NKE6 Integrase of prophage n=42 Tax=Enterobacteriacea... 119 3e-26 UniRef50_A4VPC8 Site-specific recombinase, phage integrase famil... 119 3e-26 UniRef50_B9NUX0 Site-specific recombinase, phage integrase famil... 119 4e-26 UniRef50_Q483M1 Site-specific recombinase, phage integrase famil... 119 4e-26 UniRef50_A1WW57 Phage integrase family protein n=4 Tax=Proteobac... 119 4e-26 UniRef50_C4GIW0 Putative uncharacterized protein n=1 Tax=Kingell... 119 4e-26 UniRef50_Q0F3U9 Prophage CP4-like integrase n=1 Tax=Mariprofundu... 119 4e-26 UniRef50_A5V414 Phage integrase family protein n=1 Tax=Sphingomo... 118 4e-26 UniRef50_B7N6K6 Prophage CP4-57 integrase n=8 Tax=Enterobacteria... 118 5e-26 UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID... 118 5e-26 UniRef50_A3M8T8 Phage integrase n=1 Tax=Acinetobacter baumannii ... 118 7e-26 UniRef50_A1SXI0 Phage integrase n=1 Tax=Psychromonas ingrahamii ... 118 7e-26 UniRef50_A7ZQ61 Phage integrase family protein n=32 Tax=Gammapro... 117 8e-26 UniRef50_Q083S5 Phage integrase family protein n=3 Tax=Shewanell... 117 1e-25 UniRef50_Q74H29 Integrative genetic element Gsu32, integrase n=1... 116 2e-25 UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium ML... 116 3e-25 UniRef50_A0KW55 Phage integrase family protein n=30 Tax=Gammapro... 115 3e-25 UniRef50_Q1Q875 Phage integrase n=3 Tax=Gammaproteobacteria RepI... 115 5e-25 UniRef50_C8QZM9 Integrase family protein n=1 Tax=Desulfurivibrio... 115 5e-25 UniRef50_A7H0X5 DNA integration/recombination/inversion protein ... 114 6e-25 UniRef50_B1JMJ4 Integrase family protein n=2 Tax=Enterobacteriac... 114 8e-25 UniRef50_B5WB94 Integrase n=1 Tax=Burkholderia sp. H160 RepID=B5... 114 1e-24 UniRef50_Q6AR70 Probable prophage integrase n=1 Tax=Desulfotalea... 114 1e-24 UniRef50_A5F3U5 Site-specific recombinase, phage integrase famil... 113 2e-24 UniRef50_Q7MDZ9 Phage integrase n=2 Tax=Vibrio RepID=Q7MDZ9_VIBVY 113 2e-24 UniRef50_B4T1L5 Phage integrase family protein n=12 Tax=Enteroba... 112 3e-24 UniRef50_B5EWV2 Integrase n=2 Tax=Gammaproteobacteria RepID=B5EW... 112 3e-24 UniRef50_C8Q072 Phage integrase family protein n=1 Tax=Enhydroba... 112 3e-24 UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EV... 112 4e-24 UniRef50_Q6LRH5 Putative uncharacterized protein n=3 Tax=Vibrion... 112 5e-24 UniRef50_B5BIF0 Integrase n=7 Tax=Salmonella enterica subsp. ent... 112 5e-24 UniRef50_A5EXV7 Integrase A2 n=6 Tax=Cardiobacteriaceae RepID=A5... 111 6e-24 UniRef50_D0J426 Phage integrase n=1 Tax=Comamonas testosteroni C... 110 1e-23 UniRef50_A1ANR7 Phage integrase family protein n=1 Tax=Pelobacte... 110 1e-23 UniRef50_Q1QA94 Phage integrase n=1 Tax=Psychrobacter cryohalole... 110 1e-23 UniRef50_A0YFV5 Integrase, phage related protein n=1 Tax=marine ... 110 1e-23 UniRef50_C6DZF1 Integrase family protein n=1 Tax=Geobacter sp. M... 109 2e-23 UniRef50_Q1NGR6 Putative phage integrase n=1 Tax=Sphingomonas sp... 109 3e-23 UniRef50_C6N3S0 Putative phage integrase family protein n=1 Tax=... 109 3e-23 UniRef50_C6RPH9 Site-specific recombinase, phage integrase famil... 109 4e-23 UniRef50_Q4K6S7 Site-specific recombinase, phage integrase famil... 108 5e-23 UniRef50_D0SUB2 Predicted protein n=2 Tax=Acinetobacter RepID=D0... 108 6e-23 UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE4... 107 9e-23 UniRef50_Q8EJS4 Site-specific recombinase, phage integrase famil... 107 1e-22 UniRef50_B1Y3M2 Integrase family protein n=4 Tax=Proteobacteria ... 107 1e-22 UniRef50_A7FP63 Site-specific recombinase, phage integrase famil... 107 2e-22 UniRef50_B6B4D0 Integrase n=1 Tax=Rhodobacterales bacterium HTCC... 106 2e-22 UniRef50_D0SZI9 Integrase n=14 Tax=cellular organisms RepID=D0SZ... 106 2e-22 UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria ... 106 2e-22 UniRef50_P39347 Putative prophage P4 integrase n=97 Tax=Enteroba... 104 7e-22 UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium ... 104 7e-22 UniRef50_Q72AY5 Integrase, truncation n=1 Tax=Desulfovibrio vulg... 104 1e-21 UniRef50_A1TXN0 Phage integrase family protein n=1 Tax=Marinobac... 104 1e-21 UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP... 102 4e-21 UniRef50_C8PFJ4 DNA integration/recombination/inversion protein ... 100 1e-20 UniRef50_C8PUK8 Phage integrase family protein n=1 Tax=Enhydroba... 100 3e-20 UniRef50_Q0EWR9 Integrative genetic element Gsu32, integrase n=1... 99 3e-20 UniRef50_A4Y9I4 Phage integrase family protein n=3 Tax=Shewanell... 99 4e-20 UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacteriu... 99 4e-20 UniRef50_C3MAV8 DNA integration/recombination/invertion protein ... 98 9e-20 UniRef50_B8ERI0 Integrase family protein n=1 Tax=Methylocella si... 97 1e-19 UniRef50_Q31FR8 Tyrosine recombinase n=1 Tax=Thiomicrospira crun... 96 3e-19 UniRef50_Q0TL05 Phage integrase n=6 Tax=Escherichia coli RepID=Q... 96 3e-19 UniRef50_B0VTB2 Putative prophage integrase n=1 Tax=Acinetobacte... 96 3e-19 UniRef50_Q3J1E6 Possible phage-related integrase n=2 Tax=Rhodoba... 95 5e-19 UniRef50_A5G635 Phage integrase family protein n=1 Tax=Geobacter... 95 6e-19 UniRef50_Q1GR78 Putative uncharacterized protein n=1 Tax=Sphingo... 95 7e-19 UniRef50_B0U0U5 Phage integrase n=1 Tax=Francisella philomiragia... 94 1e-18 UniRef50_B4W813 Site-specific recombinase, phage integrase famil... 94 1e-18 UniRef50_A5WEP7 Phage integrase family protein n=1 Tax=Psychroba... 92 4e-18 UniRef50_B8J346 Putative phage integrase n=1 Tax=Desulfovibrio d... 92 4e-18 UniRef50_D1UTM5 Integrase family protein n=1 Tax=Burkholderia sp... 91 8e-18 Sequences not found previously or not previously below threshold: UniRef50_C1D8D2 CP4 integrase protein n=12 Tax=Proteobacteria Re... 125 4e-28 UniRef50_A1VQL7 Phage integrase family protein n=2 Tax=Burkholde... 123 2e-27 UniRef50_B8F555 CP4-57 prophage, integrase n=1 Tax=Haemophilus p... 122 3e-27 UniRef50_C8NCE3 Phage integrase family site-specific recombinase... 122 3e-27 UniRef50_Q0I4F8 Integrase n=1 Tax=Haemophilus somnus 129PT RepID... 121 9e-27 UniRef50_UPI00019048C6 phage integrase n=1 Tax=Rhizobium etli Br... 120 2e-26 UniRef50_D1B120 Integrase family protein n=1 Tax=Sulfurospirillu... 119 4e-26 UniRef50_Q4QNN7 Prophage CP4-57-like integrase n=4 Tax=Haemophil... 118 6e-26 UniRef50_Q93UI5 Integrase-like gene 1 n=1 Tax=Escherichia coli R... 117 1e-25 UniRef50_Q4QL03 Prophage CP4-57-like integrase n=11 Tax=Haemophi... 117 1e-25 UniRef50_B7MX56 Integrase from prophage n=96 Tax=Gammaproteobact... 117 1e-25 UniRef50_B6BKY5 DNA integration/recombination/inversion protein ... 117 2e-25 UniRef50_B7I6Z3 Site-specific recombinase, phage integrase famil... 116 2e-25 UniRef50_A9I0E1 Phage-related integrase n=5 Tax=Burkholderiales ... 116 2e-25 UniRef50_B0QT04 Prophage CP4-57-like integrase n=1 Tax=Haemophil... 116 2e-25 UniRef50_A4SSF4 Phage integrase n=3 Tax=Proteobacteria RepID=A4S... 116 3e-25 UniRef50_Q1NEP8 Putative integrase n=1 Tax=Sphingomonas sp. SKA5... 115 4e-25 UniRef50_D0CDZ4 DNA integration/recombination/inversion protein ... 115 4e-25 UniRef50_B3GXJ8 Prophage CP4-57 integrase n=4 Tax=Pasteurellacea... 115 6e-25 UniRef50_UPI0001BCF971 integrase n=1 Tax=Mannheimia haemolytica ... 114 7e-25 UniRef50_A5G0X3 Putative uncharacterized protein n=2 Tax=Acidiph... 114 1e-24 UniRef50_B7I7W7 Integrase n=4 Tax=Pseudomonadales RepID=B7I7W7_A... 114 1e-24 UniRef50_C6RGV6 Phage integrase n=3 Tax=Campylobacter RepID=C6RG... 113 1e-24 UniRef50_A1W8P6 Phage integrase family protein n=4 Tax=Comamonad... 113 2e-24 UniRef50_A1ATP4 Phage integrase family protein n=2 Tax=Desulfuro... 113 2e-24 UniRef50_B8GNQ7 Phage integrase family protein n=6 Tax=Proteobac... 112 3e-24 UniRef50_P76542 Putative prophage CPZ-55 integrase n=6 Tax=Enter... 111 5e-24 UniRef50_D1D4Y4 Site-specific recombinase n=19 Tax=Neisseria Rep... 111 6e-24 UniRef50_Q1QLT5 Phage integrase n=2 Tax=Alphaproteobacteria RepI... 111 9e-24 UniRef50_A6VNS1 Phage integrase family protein n=7 Tax=Pasteurel... 110 1e-23 UniRef50_C6XEE3 Integrase family protein n=2 Tax=Proteobacteria ... 110 1e-23 UniRef50_B4WZP4 Site-specific recombinase, phage integrase famil... 109 2e-23 UniRef50_A7JSX8 Bacteriophage integrase n=3 Tax=Pasteurellaceae ... 109 3e-23 UniRef50_C6ALW6 Prophage integrase n=2 Tax=Pasteurellaceae RepID... 109 3e-23 UniRef50_B8F737 Phage integrase family site specific recombinase... 107 8e-23 UniRef50_C1TL52 Integrase n=1 Tax=Dethiosulfovibrio peptidovoran... 107 1e-22 UniRef50_Q0I4P6 Integrase n=14 Tax=Pasteurellaceae RepID=Q0I4P6_... 106 2e-22 UniRef50_C6RSU9 Phage integrase family protein n=3 Tax=Acinetoba... 105 4e-22 UniRef50_A7JZW2 Site-specific recombinase, phage integrase famil... 105 5e-22 UniRef50_A0Q3W3 Phage integrase n=8 Tax=Francisella RepID=A0Q3W3... 105 5e-22 UniRef50_A3J962 Putative integrase prophage protein n=1 Tax=Mari... 105 6e-22 UniRef50_Q2T3P2 Integrase n=31 Tax=pseudomallei group RepID=Q2T3... 105 6e-22 UniRef50_D1AZM1 Integrase family protein n=1 Tax=Sulfurospirillu... 104 7e-22 UniRef50_A8EUF6 Putative phage integrase n=1 Tax=Arcobacter butz... 104 1e-21 UniRef50_C7HXY0 Integrase family protein n=1 Tax=Thiomonas inter... 104 1e-21 UniRef50_C0VMY9 Integrase n=1 Tax=Acinetobacter sp. ATCC 27244 R... 102 4e-21 UniRef50_Q0I233 Phage integrase n=5 Tax=Pasteurellaceae RepID=Q0... 101 8e-21 UniRef50_A4BQA0 Prophage CP4-like integrase n=1 Tax=Nitrococcus ... 101 9e-21 UniRef50_D1Y3S1 Site-specific recombinase, phage integrase famil... 100 1e-20 UniRef50_B9D1P3 DNA integration/recombination/inversion protein ... 100 1e-20 UniRef50_A4N808 DNA polymerase III subunit delta n=4 Tax=Haemoph... 100 1e-20 UniRef50_Q3JXH9 Integrase or site-specific recombinase n=24 Tax=... 100 2e-20 UniRef50_D1ZVQ9 Whole genome shotgun sequence assembly, contig_3... 100 2e-20 UniRef50_C6V8W5 Integrase n=4 Tax=Enterobacteriaceae RepID=C6V8W... 100 3e-20 UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphil... 99 3e-20 UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas put... 98 7e-20 UniRef50_A1AQ50 Phage integrase family protein n=1 Tax=Pelobacte... 98 7e-20 UniRef50_Q2N8A1 Symbiosis island integrase n=12 Tax=Bacteria Rep... 97 1e-19 UniRef50_C9M6R5 Site-specific recombinase, phage integrase famil... 97 1e-19 UniRef50_A2SG96 Integrase or site-specific recombinase n=19 Tax=... 97 2e-19 UniRef50_A9VZC1 Integrase family protein n=3 Tax=Alphaproteobact... 95 6e-19 UniRef50_D2LKM4 Integrase family protein n=1 Tax=Rhodomicrobium ... 95 6e-19 UniRef50_D1UFB2 Integrase family protein n=1 Tax=Burkholderia sp... 95 7e-19 UniRef50_D1DCL4 Predicted protein n=8 Tax=Neisseria gonorrhoeae ... 95 7e-19 UniRef50_B1Y106 Integrase family protein n=1 Tax=Leptothrix chol... 95 8e-19 UniRef50_C1TKN0 Putative uncharacterized protein n=1 Tax=Dethios... 94 1e-18 UniRef50_A4A7S2 Phage-related integrase n=1 Tax=Congregibacter l... 94 2e-18 UniRef50_Q1CB22 Integrase n=3 Tax=Proteobacteria RepID=Q1CB22_YERPA 93 3e-18 UniRef50_D0W3A7 Site-specific recombinase, phage integrase famil... 92 4e-18 UniRef50_Q7MPT5 Site-specific recombinase, phage integrase famil... 91 1e-17 UniRef50_D2M358 Integrase family protein n=1 Tax=Rhodopseudomona... 91 2e-17 UniRef50_Q5R097 Integrase n=2 Tax=Idiomarina RepID=Q5R097_IDILO 90 2e-17 >UniRef50_C0Z3X8 Integrase (Fragment) n=8 Tax=Enterobacteriaceae RepID=C0Z3X8_ECOLX Length = 106 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 106/106 (100%), Positives = 106/106 (100%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS Sbjct: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD 106 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD Sbjct: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD 106 >UniRef50_C6UP78 Integrase n=13 Tax=Escherichia coli O157:H7 RepID=C6UP78_ECO5T Length = 301 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 6/109 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DTK+R+ KP + D DG+S+ + P G +++R+R+ GK + + G YP Sbjct: 27 MALTDTKVRS--AKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPD 84 Query: 61 LSLKDARQITADLRKLYFSGTDPRTY----FEEKVENSMTVAQCLDYWF 105 +SL DAR+ + RKL +G DPR + EE+ + +T + W Sbjct: 85 VSLADARKKREEARKLVAAGIDPREHKRAVKEEQAKEIITFEKVAREWL 133 >UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX Length = 394 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K++T KP P ++AD G+ + I+ G ++ +YR+ GK L +G YP Sbjct: 1 MALTDIKVKT--AKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVSTT 112 ++L DAR+ ++ RKL +G DP +E+ T W + Sbjct: 59 VTLADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQSKADRW 115 >UniRef50_C2LK76 Putative uncharacterized protein n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LK76_PROMI Length = 142 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 6/109 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SDTK+R+ K ++ D +GL + + P G +++RYR+ GK L G YP Sbjct: 27 MALSDTKVRS--AKSEDKAYKLTDGNGLFLLVHPNGSKYWRFRYRFGGKEKMLAFGVYPD 84 Query: 61 LSLKDARQITADLRKLYFSGTDP----RTYFEEKVENSMTVAQCLDYWF 105 +SL +AR+ + RKL SG DP + EE+ + T + W Sbjct: 85 ISLANAREKRDEARKLVASGVDPSEKRKEVKEEQQKEFNTFEKVARDWH 133 >UniRef50_B6C134 Putative uncharacterized protein n=1 Tax=Nitrosococcus oceani AFC27 RepID=B6C134_9GAMM Length = 189 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT +R KP +++ D+ GL + ++P G ++ +YR+ GK RL LG YP Sbjct: 1 MPLTDTTIRN--AKPGDKAKKLFDSGGLYLEVAPSGGKWWRLKYRFGGKEKRLSLGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVSTT 112 +SLKDAR+ + RKL + DP K + + WF +V Sbjct: 59 VSLKDARERRDEARKLLANEIDPSENRRAKKAAREERVANSFEVVAREWFAKHVPNW 115 >UniRef50_Q8VQN9 CP4-like integrase n=87 Tax=Enterobacteriaceae RepID=Q8VQN9_ECOLX Length = 421 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 5/108 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K+R KP ++ D G+ + + P G ++ RYR GK L LG YP Sbjct: 1 MALTDAKIRA--AKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV---ENSMTVAQCLDYWF 105 +SL +AR + RKL G DP K + ++ W Sbjct: 59 VSLSEARTKRDEARKLISEGIDPCEQKRAKKVVPDLQLSFEHIARRWH 106 >UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MJ08_9PROT Length = 418 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 15/127 (11%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT ++ KP + P +AD G+ + + P G ++ YR+ K L LG YP Sbjct: 1 MKLTDTAIKK--AKPQAKPYRIADGGGMYIEVKPNGAKYWRMAYRFADKQKTLALGVYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDP-----RTYFEEKVENSMTVAQCLDY--------WFDN 107 ++L DAR + RKL +G DP + K+ S + W N Sbjct: 59 VTLADARDRRNEARKLLANGADPGAVKQSQKKQAKIAASNSFELIAREFHSLKTPMWSTN 118 Query: 108 YVSTTLR 114 + + ++ Sbjct: 119 HAADWIK 125 >UniRef50_C3K287 Putative phage integrase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K287_PSEFS Length = 401 Score = 144 bits (364), Expect = 9e-34, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M + DT R KP P + D GL + + P G ++ +YR+ GK RL LG YP Sbjct: 1 MPLKDTNCRN--AKPQDKPYRLYDEQGLYLEVQPNGGRYWRLKYRFLGKEKRLALGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWFDNYVSTT 112 + L++AR+ D R SG DP ++++ T W + S+ Sbjct: 59 VGLQEARRKRDDARVQLASGQDPSLQRRMAKVVSQLDHQHTFESVATQWLNIRESSW 115 >UniRef50_Q2T016 Site-specific recombinase, phage integrase family n=30 Tax=Bacteria RepID=Q2T016_BURTA Length = 438 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 7/116 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++D K+R KP P +AD GL +++ P G ++ +YR+ GK G YP + Sbjct: 47 PLTDLKVR--RAKPAEQPYRLADGKGLYLQVMPNGSRYWRMKYRFDGKEKLASFGVYPEV 104 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWFDNYVSTT 112 SL ARQ RKL +GTDP E +E S + WF++ Sbjct: 105 SLAQARQACLAARKLLAAGTDPTEQKREIKRARAIEASSSFEAVAREWFESQKDGW 160 >UniRef50_Q5P090 Integrase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P090_AZOSE Length = 402 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 7/119 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D +R + K + P ++AD GL + ++P G ++YR+R GK N +G YP Sbjct: 1 MQLTDKAIRGV--KGGAKPVKMADGGGLYLEVTPAGGKLWRYRFRLAGKENVFAIGAYPR 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTTLR 114 +SL DAR+ + R L G +P Y ++ EN T A D W+ + V + + Sbjct: 59 VSLADARKARDEARDLVKQGFNPSHYRQQAKQAVIDENLNTFAPVADEWYQSKVDSWSK 117 >UniRef50_D2L516 Integrase family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L516_9DELT Length = 417 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 10/120 (8%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 + ++D +R K P ++ D GL ++++P G ++++Y + GK L LG++P Sbjct: 6 IPLTDVAIRN--AKAADKPVKMFDGAGLFLQVTPTGGKLWRFKYLFDGKEKLLALGKWPD 63 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE--------EKVENSMTVAQCLDYWFDNYVSTT 112 + LK ARQ + R L G DP + + VEN+ T A W V Sbjct: 64 VGLKMARQRRDEARALVAQGVDPSEKRKQDRADAEGQAVENANTFAVVARDWHAKQVKVW 123 >UniRef50_C8U7P7 Integrase n=30 Tax=root RepID=C8U7P7_ECO10 Length = 414 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 67/110 (60%), Positives = 83/110 (75%), Gaps = 1/110 (0%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 +A+SDTKLR +YGKPYSGP E+ D DGLSVRI+P G I FQYRYRW+GKP RL +GRYPS Sbjct: 26 LALSDTKLRGLYGKPYSGPAEITDGDGLSVRITPAGTITFQYRYRWNGKPVRLTVGRYPS 85 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVS 110 SLKDAR I ++R LY G +P+ YF + +T+ +CLD W+D YVS Sbjct: 86 TSLKDARVIVGEMRALYMKGVNPKNYFAP-SDGELTLKECLDQWWDKYVS 134 >UniRef50_B4X5T7 Site-specific recombinase, phage integrase family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X5T7_9GAMM Length = 398 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +SD K+R KP ++D +G+ + ISPKG ++++YR++GK RL LG YPS Sbjct: 5 KLSDVKIRA--AKPQDKLYSISDGEGMFLEISPKGGKWWRFKYRFNGKQKRLSLGTYPST 62 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVSTT 112 SLK AR R+L SG DP + + + T A + W N V + Sbjct: 63 SLKAARDKRQQARELLASGVDPAQQRKTEKLATETALRNTFAGVAEEWAQNKVRSE 118 >UniRef50_C8UI65 Putative integrase n=1 Tax=Escherichia coli O111:H- str. 11128 RepID=C8UI65_ECO1A Length = 352 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++ ++ KP ++AD GL + + P G ++ +YR GK L LG YP Sbjct: 1 MKLNARQI--DTAKPKEKAYKLADGGGLYLLVKPNGGKYWRLKYRVAGKEKLLALGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTT 112 ++L DAR D ++ G DP E+ + + T W + + Sbjct: 59 VTLADARAKREDAKRGIAGGIDPMEAKREEKIARETQLNNTFKDIALEWHSSKLKKW 115 >UniRef50_C0GR55 Integrase family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR55_9DELT Length = 401 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 3/113 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++D +++ + KP S V D DG+ + ++P G ++++YR++GK L LG+YP Sbjct: 1 MSLTDVQVKGL--KPGSTKYRVKDKDGMYLEVTPAGGKLWRFKYRFNGKNKLLALGKYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE-EKVENSMTVAQCLDYWFDNYVSTT 112 +SL AR+ + R+ G DP + EK E T D W+ ST Sbjct: 59 VSLAKAREKLSIARQQIAEGKDPAYIKKIEKAEKENTFKAITDEWWRAKKSTW 111 >UniRef50_A9MQQ9 Putative uncharacterized protein n=9 Tax=Salmonella enterica RepID=A9MQQ9_SALAR Length = 247 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 5/115 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D+K+R+ K ++ D+ GL + +S G + +RYR+ GK NRL G YP Sbjct: 1 MALNDSKIRS--AKTLDKSYKLTDSQGLYLTVSTSGAKLWYFRYRFDGKENRLAFGAYPL 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWFDNYVSTT 112 ++L +AR+ RKL SG P + V+ S T W + + Sbjct: 59 VTLAEAREKRDAARKLLASGICPSQLRKTNDASVDESRTFKFIATAWHTSCLKLW 113 >UniRef50_D0W4G5 Site-specific recombinase, phage integrase family n=4 Tax=Neisseria RepID=D0W4G5_NEICI Length = 428 Score = 137 bits (347), Expect = 8e-32, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 15/127 (11%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D ++R KP P ++ D GL + I+ G +++ + +GK L +G+YP+ Sbjct: 24 MKLNDRQIRN--AKPAEKPYKLNDGKGLYLYINTSGGKLWRFDFACNGKRKTLSIGKYPT 81 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWF--------DN 107 +SL +AR+ R++ +G DP +++ E T W +N Sbjct: 82 VSLAEARETAETARRMLAAGQDPSEAKQQEKEERKAAALNTFESIARRWHTDNLTRWKEN 141 Query: 108 YVSTTLR 114 + + LR Sbjct: 142 HAARVLR 148 >UniRef50_A6QCY9 Site-specific recombinase, phage integrase family n=2 Tax=Proteobacteria RepID=A6QCY9_SULNB Length = 409 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 10/113 (8%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++D +++ KP ++ D GL + I+PKG ++ +YR+ GK R+ LG YP+ Sbjct: 7 PLTDKEIKA--AKPKEKEYKLFDGGGLYLSITPKGQKWWRLKYRFDGKEKRISLGVYPNT 64 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVEN--------SMTVAQCLDYWFD 106 SL+DARQ D + G DP +EK E T W + Sbjct: 65 SLQDARQQREDFKTQIAKGIDPSRERKEKKEAVKAEVFKSRNTFKSICLEWIE 117 >UniRef50_Q3JN19 Prophage CP4-like integrase n=62 Tax=Proteobacteria RepID=Q3JN19_BURP1 Length = 462 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 7/113 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD +R KP P ++ D DG+ + + P G ++ YR+ GK L LG YP Sbjct: 58 MNLSDLAVRN--AKPQDKPYKLTDGDGMFLLVQPNGGKYWRLAYRYLGKQKTLALGVYPE 115 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYWFDNY 108 +SL ARQ A+ R+ G DP + ++ + W + Sbjct: 116 VSLALARQRRAEAREQLAKGADPGETKKADRRAARLAADNSFEVVALAWLEER 168 >UniRef50_C5V4I9 Integrase family protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4I9_9PROT Length = 410 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 15/126 (11%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+++ ++ KP P +++D GL + + G ++ YR+ K L LG YP Sbjct: 1 MALTELAVKN--AKPKDKPYKLSDGGGLFLLVQINGGKYWRLAYRFADKQKTLALGIYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDY--------WFDN 107 +SL DAR+ RKL + TDP +E + + + W + Sbjct: 59 ISLADARERREQARKLLANDTDPSAIKKETKRILQTATVNSFSALAKELHKVKAPMWTEG 118 Query: 108 YVSTTL 113 + + Sbjct: 119 HAKQWM 124 >UniRef50_B1JDS4 Integrase family protein n=3 Tax=Pseudomonadaceae RepID=B1JDS4_PSEPW Length = 402 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 6/110 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT +RT +P +ADA GL + ++ G ++ RYR+ GK LGLG YPS Sbjct: 1 MALTDTAIRT--ARPRDKLYRIADAQGLCLEVTTAGGKLWRLRYRFEGKAKMLGLGTYPS 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTY----FEEKVENSMTVAQCLDYWFD 106 ++L AR+ RKL G DP Y ++T+ W+D Sbjct: 59 VTLAHARERRDAARKLLSQGIDPSAYKQQEKAAAEAQALTLETLAREWYD 108 >UniRef50_A3UDD1 Symbiosis island integrase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UDD1_9RHOB Length = 406 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 5/115 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D K+R + KP V+D++GLS+ ++PKG +++RYR++GK +GLGRYPS Sbjct: 1 MPLTDAKIRAL--KPADTLYRVSDSNGLSIEVTPKGDRYWRFRYRFNGKAQMMGLGRYPS 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 +SLK AR R+L G +P + + + + Q F + + LR+ Sbjct: 59 VSLKKARSKRDHYRELLDEGLNPSLERQTRQQELAQLEQSS---FGSIATEFLRK 110 >UniRef50_Q8W6M6 Putative uncharacterized protein orf1 n=1 Tax=Sinorhizobium phage PBC5 RepID=Q8W6M6_9CAUD Length = 433 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 7/119 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 A++D +++ K ++AD GL++ + G ++ RYR+ GK L +G YP + Sbjct: 3 ALTDKQIKN--AKKADKDYKLADGGGLNLFVLSTGTKSWRLRYRFDGKEKTLVIGNYPDV 60 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWFDNYVSTTLRE 115 SL DAR ++ SG DP + K + + T W T + + Sbjct: 61 SLADARGEREAAKETLKSGRDPNVVKKIEKAIGKQQAADTFEVLAREWHKLQKPTWVEK 119 >UniRef50_Q0BEM8 Phage integrase family protein n=4 Tax=Burkholderia ambifaria RepID=Q0BEM8_BURCM Length = 414 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D K+R K + P ++ D +GL + + P G ++Y+YR GK N +G YP+ Sbjct: 1 MPLTDIKIRQ--AKAGNKPTKLTDGNGLYLLVKPSGSKLWRYKYRIAGKENVFAIGEYPT 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTT 112 SL+ AR D R+L G P +E + E T D W + T Sbjct: 59 TSLQAARVARDDARELVKKGLHPSHARQEVLSARINEGKATFRAVSDEWLEKKRKTW 115 >UniRef50_UPI0001AF6377 prophage PSPPH01, site-specific recombinase phage integrase family protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF6377 Length = 393 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++ K+R + KP P ++ D+ GL + ++P G ++YR+R GK N +G YP Sbjct: 1 MPLTAVKIR--HAKPGPAPIKLTDSGGLFLEVTPGGNKLWRYRFRLAGKENTYAIGSYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNY-VSTTLR 114 LSL DAR R+L G +P ++ ENS T + W + + TL+ Sbjct: 59 LSLSDARAERDAARELVKLGRNPAHVRQTVKAQQLSENSNTFKVVAEEWIEKRLANRTLK 118 >UniRef50_UPI0000E0FEDC DNA integration/recombination/inversion protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FEDC Length = 418 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 2/111 (1%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT ++ KP + +++D+ GL + I P G ++Y +R + +G+YP Sbjct: 1 MALTDTAIKN--AKPKTKAYKMSDSGGLFLLIKPSGYKSWKYDFRINSTRGSYTIGKYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVST 111 +SLK ARQ R+L G +P+ ++ N + Y+ + +++ Sbjct: 59 ISLKQARQEHLQARELVAQGINPKQIKTQRKVNDELQTKRFSYYMNQWLNK 109 >UniRef50_B5QDA8 Phage integrase family protein n=1 Tax=Salmonella enterica subsp. enterica serovar Virchow str. SL491 RepID=B5QDA8_SALVI Length = 403 Score = 135 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 54/109 (49%), Positives = 70/109 (64%), Gaps = 3/109 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DTKLR I GKPY GP E+ D GLSVRISPKG+I FQYRYR++GKP RL LG Y S Sbjct: 1 MPLNDTKLRRIDGKPYDGPVEIPDGGGLSVRISPKGLITFQYRYRFNGKPVRLKLGVYGS 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWFD 106 +S+K+AR +K G +P Y ++K S +A ++ W D Sbjct: 61 MSIKEARDAVEVCKKWLSEGKNPAVYRKLDKKKKTESPDIATLVNEWLD 109 >UniRef50_Q0AH02 Phage integrase family protein n=2 Tax=Nitrosomonas eutropha C91 RepID=Q0AH02_NITEC Length = 393 Score = 134 bits (339), Expect = 6e-31, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 15/128 (11%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D+ +R KP ++ D +GL++ I P G ++YRY ++ K + L LG+YP Sbjct: 1 MKLTDSAIRA--AKPKEKQYKLTDGNGLTLLIYPDGSKHWRYRYLFNEKESMLSLGKYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWF--------DN 107 +L AR I + + G +P T+ +E+ + + W+ + Sbjct: 59 TTLAQARSIHDGYKAILKQGINPSTHRKEEKRKAIVSVENSFEAVARTWWMHWKHAKTER 118 Query: 108 YVSTTLRE 115 +V+ TLR Sbjct: 119 HVAYTLRR 126 >UniRef50_B0C8U1 Phage integrase family protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8U1_ACAM1 Length = 399 Score = 134 bits (339), Expect = 6e-31, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 7/115 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D ++R KP +G ++D GL ++I+P G ++YRYR GK + +G YP L Sbjct: 6 LTDLQVRN--AKPKTGSYRLSDGGGLFLQITPAGGKHWKYRYRIQGKESTFSIGSYPELG 63 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWFDNYVSTT 112 L +AR + R+L G +P T + ++ T D WF + Sbjct: 64 LGEARAKHLEARRLVAQGLNPTTEAKRLQLSLQLAQGNTFEFVADEWFSQKNAGW 118 >UniRef50_A5PEV9 Symbiosis island integrase (Fragment) n=2 Tax=Erythrobacter sp. SD-21 RepID=A5PEV9_9SPHN Length = 163 Score = 134 bits (338), Expect = 9e-31, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 7/112 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT+LR + KP P +V D GL V ++P G +++RYR G +L +G YP Sbjct: 1 MPLTDTRLRAL--KPKDKPYKVTDERGLYVEVTPTGSKLWRFRYRIGGAQKKLCIGSYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPR-TYFEEKVEN----SMTVAQCLDYWFDN 107 +SLK AR + R+ SG DP + K+ + T + + Sbjct: 59 ISLKQARDAAYEARRAVASGGDPAFEKRKRKIRAEFLSAQTFEAVAREYIEQ 110 >UniRef50_B5AXB8 Putative integrase n=1 Tax=Escherichia coli RepID=B5AXB8_ECOLX Length = 396 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 7/112 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYP 59 ++D +L++ KP +++D GL + +S G ++ +YR K +RL G YP Sbjct: 8 KLTDRQLQST--KPRDKTYKLSDGGGLYLEVSQTGSKYWRMKYRRPSDKKEDRLAFGVYP 65 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWFDNY 108 ++SL+DAR+ + +KL G DP+ + T W +++ Sbjct: 66 TISLQDAREKRDNAKKLLVKGIDPKAEQRAAKAEEKGAFTFETIGRQWVESH 117 >UniRef50_A5EQ25 P4-like integrase n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EQ25_BRASB Length = 407 Score = 133 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 7/115 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DTK R K ++++D GL + I+P G ++ YRWHGK L LG YP+ Sbjct: 1 MPLTDTKCRN--AKGQIKSRKLSDGGGLHLLITPDGAKYWRLAYRWHGKQRTLALGVYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVS 110 + L +AR D ++ + DP E+ + T W +N+ Sbjct: 59 VGLIEARASRDDAKRSIAADIDPSIVKRERKRAAKIATGNTFEAVAREWHENWKD 113 >UniRef50_B6WV41 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV41_9DELT Length = 401 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 6/115 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++DT +RT KP P ++AD+ GL V ++P G ++ +YR+ GK +G YP++ Sbjct: 4 KLTDTAIRT--AKPKEKPYKMADSGGLYVLVNPGGGKLWRLKYRFEGKERLFAIGTYPAV 61 Query: 62 SLKDARQITADLRKLYFSGTDP----RTYFEEKVENSMTVAQCLDYWFDNYVSTT 112 SLK+AR +++ G DP + E + S T W ++ Sbjct: 62 SLKEARARAVTAKEMIARGVDPCAARKAAKAEAIARSRTFEVVAREWHKKKLAGW 116 >UniRef50_D0KY10 Integrase family protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KY10_HALNC Length = 427 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 2/91 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT ++ + KP S P +V D GL + ++P G ++ YR+ GK L LG YP Sbjct: 1 MALTDTAIKAL--KPESKPYKVTDEKGLYLFVTPAGGKLWRLDYRFEGKRKTLALGGYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV 91 ++LK AR + R+L +GTDP + + Sbjct: 59 VNLKQARVYRDEARQLIANGTDPAELRKAEK 89 >UniRef50_A3M3W1 Phage integrase n=4 Tax=Acinetobacter baumannii RepID=A3M3W1_ACIBT Length = 401 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 45/112 (40%), Positives = 67/112 (59%), Gaps = 3/112 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+++ L+ GK +E+AD D +SVRISPKG I FQ RYR+ GK RL LG YP Sbjct: 1 MALTEVWLKANNGKARDKVEEIADRDSMSVRISPKGKIVFQLRYRFAGKAERLDLGTYPH 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTY---FEEKVENSMTVAQCLDYWFDNYV 109 +SLKDAR ++R L G +P+ ++K ++ T + + W+++Y Sbjct: 61 MSLKDARIKAGEMRSLLDKGMNPKVEVRVQQQKYIDASTFEEVFNDWYESYC 112 >UniRef50_Q2NQD5 Putative phage integrase n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NQD5_SODGM Length = 332 Score = 132 bits (334), Expect = 2e-30, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 3/114 (2%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +SD KLR + G P + AD GLSVR+S G I + + YR G R+ LGRYP + Sbjct: 19 KLSDKKLRNLLGVPRDKYEFFADGAGLSVRVSTVGGISWTFTYRNSGTIQRVTLGRYPDM 78 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWFDNYVSTT 112 SLK AR+ + R G DPR + + S+ TV + ++YW +Y Sbjct: 79 SLKRAREKRDECRTWLSEGKDPRRQLKLIKQESLKPVTVREAIEYWIKHYAMDN 132 >UniRef50_A3M8S0 Putative integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M8S0_ACIBT Length = 433 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 7/113 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG--KPNRLGLGRYP 59 ++DTK ++ KP AD GL +R+ P G + +RY G K ++ LG YP Sbjct: 7 PLTDTKCASL--KPKDKEYVEADGGGLYLRVRPTGAKSWIFRYTNRGNDKREKITLGPYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWFDNYV 109 +LSL AR+ + ++ G DP+ K N T+ + W D Y Sbjct: 65 ALSLAKAREKKHEFLRMIAEGVDPKEQLSILLAKKNNVNTLENVVRVWLDAYA 117 >UniRef50_Q0C1T8 Site-specific recombinase, phage integrase family n=2 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C1T8_HYPNA Length = 409 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 7/118 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D K+R++ KP P+ D L + + P G +++ Y++ GK + LG YP Sbjct: 15 MPLTDLKIRSL--KPDGKPRRYTDGGNLFIEVRPNGSKLWRFAYKFDGKQKLMALGTYPE 72 Query: 61 LSLKDARQITADLRKLYFSGTDPRTY-----FEEKVENSMTVAQCLDYWFDNYVSTTL 113 +SL AR+ A+ R L G DP E + T + D L Sbjct: 73 ISLARAREKRAEARALLIEGIDPMQQAKVNKLERQALTEHTFSAIAAELLDKNRREGL 130 >UniRef50_B5F474 Integrase n=26 Tax=Proteobacteria RepID=B5F474_SALA4 Length = 449 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 7/110 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRY 58 M ++ ++ T KP ++AD GL + +SPKG ++ +YR K +RL G Y Sbjct: 30 MKLNARQIET--AKPKEKAYKMADGGGLYLEVSPKGSKYWRMKYRRPSDKKEDRLAFGVY 87 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWF 105 P+++L +AR +KL G DP+ + ++E + W Sbjct: 88 PTITLAEARAKRDAAKKLLSQGIDPKVEQKGAQAEIEGAYLFETIARQWH 137 >UniRef50_C7I2C4 Putative integrase n=1 Tax=Thiomonas intermedia K12 RepID=C7I2C4_THIIN Length = 229 Score = 131 bits (331), Expect = 6e-30, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 7/115 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT +R KP + ++ D GL + I+P G ++ +Y + GK RL G YP Sbjct: 1 MPLTDTTIRN--AKPGAKSIKLFDERGLYLEITPPGGKLWRLKYSFGGKEKRLSFGAYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWFDNYVS 110 +SLK AR+ D R++ G DP + ++ + W +++ Sbjct: 59 VSLKAAREKRDDARRMLADGIDPSEARKAAKARALQMAEDSFEAIAMEWAKRHLA 113 >UniRef50_UPI00016B13C2 phage integrase family protein n=1 Tax=Burkholderia pseudomallei BCC215 RepID=UPI00016B13C2 Length = 324 Score = 131 bits (331), Expect = 6e-30, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 5/102 (4%) Query: 12 YGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITA 71 K + P ++ D +G+ + + P G ++ YR+ GK L LG YP+++L AR+ Sbjct: 3 NAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVTLATARKKRD 62 Query: 72 DLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYWFDNY 108 + R+ +G DP + ++ + + WFD+ Sbjct: 63 EAREQIAAGIDPGEAKKEARRAAEIAAANSFEAVAREWFDSQ 104 >UniRef50_Q48NQ4 Prophage PSPPH01, site-specific recombinase, phage integrase family n=2 Tax=Pseudomonas RepID=Q48NQ4_PSE14 Length = 391 Score = 131 bits (330), Expect = 6e-30, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K+R KP ++ D+ GL + ++ G ++YR+R GK N +G YP Sbjct: 1 MALTDLKIRQ--AKPGKTSSKLTDSGGLYLEVTTGGSKLWRYRFRLAGKENTYAIGAYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVST 111 +SL DAR R L SG +P + + EN T W + ++ Sbjct: 59 VSLSDARTERDAARDLVKSGRNPAHVRQTEKAQQLTENRNTFKIVSQEWIEKRLAQ 114 >UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomonas RepID=A5W5R9_PSEP1 Length = 393 Score = 131 bits (330), Expect = 7e-30, Method: Composition-based stats. Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 7/111 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT R KP +AD+ GL++ ++ GV + +R+ W GK R+ LG YP Sbjct: 1 MALTDTAARQ--AKPREKGYTLADSLGLTLYVAETGVKSWHFRFTWLGKQARISLGTYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFD 106 + LK+AR + R+ G DPR EK T + + W + Sbjct: 59 IGLKEARARRDEAREDVAQGKDPRESRREKKVERLGAKERTFRRVYEEWLE 109 >UniRef50_Q0P7K9 Bacteriophage integrase n=8 Tax=Enterobacteriaceae RepID=Q0P7K9_ECOLX Length = 423 Score = 130 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 5/113 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++D K+R++ KP P +V+D+ GL + + P G + +YR +GK +R+ LG YP+ Sbjct: 1 MSLNDAKIRSL--KPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEK---VENSMTVAQCLDYWFDNYVS 110 +SL DARQ +RK+ +P + W + Sbjct: 59 VSLSDARQQREGIRKMLALNINPAQQRAAERGSRMQEKMFKSVALEWHSSKKK 111 >UniRef50_C8R2J0 Integrase family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2J0_9DELT Length = 420 Score = 130 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 9/119 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG----KPNRLGLG 56 M ++D ++R + K + + D GL + ++P G ++++YR+ G + RL LG Sbjct: 1 MTLTDAQVRNV--KAEDKTRRLFDGGGLYLEVAPSGGKWWRFKYRFPGQGKIQEKRLSLG 58 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKV---ENSMTVAQCLDYWFDNYVSTT 112 YP + LK+AR ++R+ G DP + + W N + Sbjct: 59 TYPGVGLKEARAKRDEMRRQIAQGIDPANLRRSTRGSGALAGSFEAVARLWHRNNSTDW 117 >UniRef50_C7SIL5 Integrase B n=113 Tax=Gammaproteobacteria RepID=C7SIL5_ECOLX Length = 420 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++D K+RT+ KP P +V+D+ GL + + P G + +YR +GK +R+ LG YP+ Sbjct: 1 MSLTDAKIRTL--KPSDKPFKVSDSHGLYLLVKPGGSRHWYLKYRINGKESRIALGAYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMT---VAQCLDYWFDN 107 +SL DARQ +RK+ +P + + W + Sbjct: 59 VSLSDARQQREGVRKMLALNINPVQQRAAERGSRTPDKVFKNVALAWHKS 108 >UniRef50_A1BGX1 Phage integrase family protein n=25 Tax=root RepID=A1BGX1_CHLPD Length = 419 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 7/110 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 + +SD ++ KP +++D GL + ++ G ++++YR+ GK L LG+YP Sbjct: 6 LPLSDAQVSK--AKPAEKDYKLSDGGGLHLLVTTSGGKLWRFQYRFDGKQKLLALGQYPE 63 Query: 61 LSLKDARQITADLRKLYFSGTDPR-----TYFEEKVENSMTVAQCLDYWF 105 +SL +AR+ + R L + DP E ++++ + WF Sbjct: 64 ISLANARKRREEARTLLANEQDPSEAKKAAKKAEALKDASSFELVAREWF 113 >UniRef50_UPI00016B0CE6 putative integrase n=1 Tax=Burkholderia pseudomallei NCTC 13177 RepID=UPI00016B0CE6 Length = 162 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 2/92 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT ++ + KP P+++ D GL + ++P ++ +YR+ GK L G YP Sbjct: 1 MALTDTAIK--HAKPAEKPRKLFDGSGLYLLLTPDQGKYWRLKYRFGGKEKSLSFGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE 92 ++L AR + + R L G DP +E+ Sbjct: 59 VTLAAARNLRDEARALLAEGVDPSEVRKEERA 90 >UniRef50_C0VMW7 Phage integrase n=2 Tax=Acinetobacter RepID=C0VMW7_9GAMM Length = 419 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 5/111 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD ++R I KP + AD GL + ++P G ++ +YR++G+ + L +G YP +S Sbjct: 22 LSDAQVRKI--KPLEKKKRYADEKGLYLEVTPSGGRFWRLKYRFNGRESTLTIGSYPEIS 79 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVE---NSMTVAQCLDYWFDNYVS 110 L AR+ + R +S DP ++++ S+ W ++ + Sbjct: 80 LAQARRARDEARIQLYSNIDPNAVKNQRLQQTDESILFKSLAMEWMEDRKA 130 >UniRef50_B6WTC3 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTC3_9DELT Length = 269 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 6/116 (5%) Query: 1 MA-ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 MA +++ K++ I KP D+ GL +++SP G ++++YR K + LG +P Sbjct: 1 MAQLTELKIKAI--KPSEKMARYYDSGGLYLQVSPTGGKYWRFKYRVEKKEKLVALGTWP 58 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWFDNYVSTT 112 +SLK+AR+ R+ +G DP + + E + T + + W +N + Sbjct: 59 QVSLKEAREKRDQCRQEIAAGNDPMLLKKARAEAACPGRTFQEVAEAWRNNMENVW 114 >UniRef50_Q5P707 Phage-related integrase n=2 Tax=Proteobacteria RepID=Q5P707_AZOSE Length = 415 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D K R + K VAD+ GL + + P G ++YR+R K N LG YP++ Sbjct: 2 LTDAKCRAV--KATDKTYRVADSHGLCLEVRPSGAKFWRYRFRLADKQNMHALGEYPAMG 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWFDN 107 L+DAR+ + R+L G +P + + + T W + Sbjct: 60 LQDARRARDEARELVRKGINPSHHRGLEKAERILALGSTFETVTAEWIER 109 >UniRef50_C1M393 Bacteriophage integrase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M393_9ENTR Length = 420 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 5/115 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D ++ P +AD+ GL + IS G + +R+R++GK NR+ G YP Sbjct: 1 MPLNDHIIQNAIS--QEKPYRLADSLGLYLVISNSGSRLWYFRFRFNGKQNRIAFGPYPQ 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWFDNYVSTT 112 +++ DAR+ RKL SG P + + + S T W + ++ Sbjct: 59 ITIADARRKRDAARKLLTSGISPSEHRKSEKAASSKTRTFQHIALAWHSSCLNRW 113 >UniRef50_C8KXV2 Prophage CP4-57-like integrase n=1 Tax=Actinobacillus minor 202 RepID=C8KXV2_9PAST Length = 406 Score = 128 bits (323), Expect = 4e-29, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 10/121 (8%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 + DT+++ KP P + D GL + +SP G +++ Y K ++ LG YP Sbjct: 7 PLVDTEIKK--AKPEDKPYTMTDGQGLFLIVSPTGSKSWRFNYYRPISKKRAKIALGMYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQ-----CLDYWFDNYVSTTLR 114 +++L AR + + + L +G DP+ + ++ + Q + W T ++ Sbjct: 65 AITLSKARALRDEYKHLLANGIDPQEHCKQLELQKLQFKQNTLFAIAEKW-KQKKETEVK 123 Query: 115 E 115 E Sbjct: 124 E 124 >UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IGA6_BORPD Length = 657 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 8/120 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD +R K + D D LS+ +S G + +RY W GK R+ LG YP+ Sbjct: 15 MALSDLIVRQ--AKTTGKRYTLYDNDCLSLMVSAAGGKSWMFRYSWLGKQKRMALGGYPA 72 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWFDNYVSTTLRE 115 LSL++AR + L G DP+ ++ K+ T D W ++ L+E Sbjct: 73 LSLREARAERDKAQALIARGIDPQIERDQRRHAAKLAGEYTFKNVFDAWVEHR-RKELKE 131 >UniRef50_Q3SHC8 Probable cp4-like integrase protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHC8_THIDA Length = 425 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 8/109 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 A++DT ++ KP P ++AD GL + ++ G ++ YR+ GK L LG Y + Sbjct: 18 ALTDTAVKK--AKPGDKPYKMADEKGLYLLVNQAG-KYWRMDYRFLGKRKTLALGVYSDV 74 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWF 105 SL ARQ D R + GTDP +E + + + W Sbjct: 75 SLARARQKRDDARAMLADGTDPGEQRKETKRANQAAQANSFEAVAREWH 123 >UniRef50_C8T7N5 Phage integrase family site-specific recombinase (Fragment) n=11 Tax=Enterobacteriaceae RepID=C8T7N5_KLEPR Length = 188 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++D K+RT+ KP P +V+D+ GL + + P G + +YR +GK +R+ LG YP+ Sbjct: 1 MSLTDAKIRTL--KPSDKPFKVSDSHGLYLLVKPGGSRHWYLKYRINGKESRIALGAYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMT---VAQCLDYWFDN 107 +SL DARQ +RK+ +P + + W + Sbjct: 59 VSLSDARQQREGVRKMLALNINPVQQRAAERGSRTPDKVFKNVALAWHKS 108 >UniRef50_C4U2J7 Phage integrase family protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U2J7_YERKR Length = 369 Score = 128 bits (322), Expect = 7e-29, Method: Composition-based stats. Identities = 47/114 (41%), Positives = 74/114 (64%), Gaps = 3/114 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD KLR + GKP E+ D+ GLS+R++P G++ FQYRYR+ KP R+ LG Y LS Sbjct: 12 LSDAKLRKLSGKPIPKLIEMPDSGGLSIRVTPLGLVVFQYRYRFGVKPRRMTLGVYDDLS 71 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWFDNYVSTTL 113 LK+AR++ + +++ SG DP E ++EN S+TV+ C+ +W ++ + L Sbjct: 72 LKEAREMVQESKRILLSGRDPIIVKEMELENKVASVTVSLCIKHWLESAQAKLL 125 >UniRef50_D2LIX3 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LIX3_RHOVA Length = 392 Score = 128 bits (322), Expect = 7e-29, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 7/110 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD K+RT KP +++DADGL + + P G ++ YR GK L +G+YP Sbjct: 1 MALSDLKIRTT--KPTERDFKLSDADGLYLLVRPNGSKLWRLNYRHLGKNKTLAIGKYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEK-----VENSMTVAQCLDYWF 105 ++L AR A+ R+L G DP + + V + T + + Sbjct: 59 IALSTARDKRAEARRLLAEGVDPSYRKQVEVAKAKVAAANTFEAVAEEYL 108 >UniRef50_UPI00016954D2 DNA integration/recombination/inversion protein n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=UPI00016954D2 Length = 252 Score = 127 bits (321), Expect = 8e-29, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 2/91 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D +R +P S P + D GL + I+P G ++++YR+ GK RL LG YP Sbjct: 1 MPLNDLLIRK--AQPASKPVRLFDGGGLYLEIAPSGGKLWRWKYRFAGKEKRLALGPYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV 91 +SL +AR+ A+ R++ SG DP + + Sbjct: 59 ISLAEARKRHAESRQVLKSGIDPGEQRKVQK 89 >UniRef50_B0RRY6 Complete genome, strain B100 n=3 Tax=Proteobacteria RepID=B0RRY6_XANCB Length = 409 Score = 127 bits (321), Expect = 8e-29, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 9/119 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRY 58 M ++DT +R KP + PQ++ D +GL + + P G ++Y YR GK N L G Y Sbjct: 1 MPLTDTAIR--RAKPAATPQKLRDGNGLYLLLRPDGARWWRYDYRRPVTGKRNTLSFGTY 58 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYWFDNYVSTT 112 P +SL DAR+ A+ R+L + DP + + + + WF Sbjct: 59 PEVSLADARERLAEARRLVAAKIDPGEQRKAVKAAGEAAAANSFEVVAREWFAKQQKEW 117 >UniRef50_A8EWJ5 Phage integrase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EWJ5_ARCB4 Length = 410 Score = 127 bits (320), Expect = 9e-29, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 7/115 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 + D +++ KP + D GL + ++P +++RY ++GK + YP +S Sbjct: 7 LQDIQVKQ--AKPTKETYYLFDGLGLYLEVTPNNAKIWKFRYTYNGKRKKTSFQSYPKVS 64 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTT 112 LK AR+ + +L F G DP Y++E+ E++ + W + S + Sbjct: 65 LKQARKKRDNYNELLFDGIDPIEYYKEQKELKQIEDTSSFKNIFTQWLEMEKSKS 119 >UniRef50_Q167M4 CP4-like integrase, putative n=40 Tax=Alphaproteobacteria RepID=Q167M4_ROSDO Length = 409 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 7/115 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD K+R + K +VAD D L V + P G +Q +YR G+ L +G YP+ Sbjct: 15 MPLSDAKIRNL--KARDKQYKVADFDSLYVLVKPNGSKLWQMKYRLDGREKTLSIGAYPA 72 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNYVS 110 +SL+ AR+ R + +G DP +E+ + T + + D Sbjct: 73 VSLQQARKSRDAARSMIANGEDPSEEKQEQKRLKREASGQTFEKIGGMFLDKQRK 127 >UniRef50_C0N6F7 Site-specific recombinase, phage integrase family protein n=2 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6F7_9GAMM Length = 401 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 14/127 (11%) Query: 1 MAISDTKLRTIYGKP--------YSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNR 52 M ++D +++ + KP + P +V+D+ GL + + KG +++Y++ + G + Sbjct: 1 MPLTDKQIKNL--KPGIRPDKSETNKPYKVSDSHGLYIEVPLKGSKRWRYKFYFEGTERK 58 Query: 53 LGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENS----MTVAQCLDYWFDNY 108 L LG YP +SLK+ARQ D+RK +G DP +K N+ T + W Sbjct: 59 LSLGTYPKISLKEARQKRDDIRKKIDAGIDPSYERRKKRLNASVSGNTYEEVAREWHARN 118 Query: 109 VSTTLRE 115 + ++ Sbjct: 119 KANWTKK 125 >UniRef50_B8L9U1 Phage integrase family protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9U1_9GAMM Length = 399 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K+R KP P ++D GL + I P G ++Y YR K L +G Sbjct: 1 MALTDFKIRG--AKPAEKPYRLSDGGGLFLEIRPNGSKLWRYAYRLDSKQRLLAIGSLQD 58 Query: 61 LSLKDARQITADLRKLYFSGTDP---RTYFEEKVENS--MTVAQCLDYWFDNYVSTT 112 +SL DAR + G DP R + + E S TVA+ + W+ + Sbjct: 59 VSLADARAAMRQAKSQVKLGQDPVLQRKIAKARSEESALNTVAENAEDWYSGAEKSW 115 >UniRef50_B8EF22 Integrase family protein n=3 Tax=Shewanella baltica RepID=B8EF22_SHEB2 Length = 410 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 3/112 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD+ L+ GK E AD DGLSVR+SPKG + FQ RYR+ GK +RL LG YP+ Sbjct: 1 MALSDSWLKANSGKEIDKAYEKADRDGLSVRVSPKGKLTFQLRYRYIGKASRLDLGSYPA 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWFDNYV 109 SLK AR L+ G DP+ ++EN+ T++ W Sbjct: 61 TSLKSARTECLRLKGELEKGYDPKLVKINDRIEIENAPTISDLFYRWHSAKK 112 >UniRef50_B5F8X4 Integrase n=1 Tax=Salmonella enterica subsp. enterica serovar Agona str. SL483 RepID=B5F8X4_SALA4 Length = 120 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 5/110 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K+R + K P +V D+ GL + + P G + RYR+ GK R+ G YP+ Sbjct: 1 MALTDPKIRAL--KSLDKPYKVIDSGGLYILVKPGGAKHWYLRYRFGGKETRIAFGVYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS---MTVAQCLDYWFDN 107 ++L AR+ ++R++ P + + T+ N Sbjct: 59 VTLAAAREKREEVRRMLAENVHPALQRVAEKVAADPSRTLQHIASELHQN 108 >UniRef50_B9Z434 Integrase family protein n=2 Tax=Neisseriaceae RepID=B9Z434_9NEIS Length = 395 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 8/110 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY-RWHGKPNRLGLGRYP 59 M +SD K+RT KP P ++ D GL + I P G ++YRY K +G YP Sbjct: 1 MPLSDVKIRT--SKPLDKPYKLQDGKGLYLEIRPTGAKFWRYRYWTSPTKDGIYTIGEYP 58 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYW 104 +SL +AR +R L G +P + + E + T+A + W Sbjct: 59 DVSLAEARAERERVRALVKEGKNPTAEKKLDKLRSQKETATTLAVVAEEW 108 >UniRef50_B0RMR5 Prophage integrase n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RMR5_XANCB Length = 148 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD +R P P + D GL V ISPKG ++++YR+ GK RL LG YP Sbjct: 1 MPLSDAAVRN--ATPADKPVRLFDGGGLYVEISPKGAKLWRWKYRFGGKEKRLALGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE 88 +SL + R + RK+ SG DP Sbjct: 59 VSLAEVRAQHLEARKVLRSGIDPGEKRR 86 >UniRef50_A6SWC6 Prophage integrase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWC6_JANMA Length = 414 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 9/118 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGK--PNRLGLGRYP 59 ++D +++ KP P ++AD +G+ + I P G ++ YR + RL G YP Sbjct: 7 PLTDLRIKA--AKPKEKPYQLADGEGMYLEILPSGSKVWRMAYRQENRTTSTRLTFGHYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTT 112 ++ L +AR+ AD +K G DP + + T W N + Sbjct: 65 AVGLAEARRKRADTKKQIVEGVDPAQARRVEKAISATAAANTFEAVARMWHQNKLEQW 122 >UniRef50_Q6LJV6 Hypothetical site-specific recombinase, phageintegrase family n=3 Tax=Photobacterium profundum RepID=Q6LJV6_PHOPR Length = 424 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 3/115 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DT L+ + K + D DGL +R+S +G I F RYR GK + + LG YP LS Sbjct: 13 LNDTTLKKMLKKSREKLARLPDRDGLYIRVSTRGKIVFYIRYRIGGKQDSMDLGEYPLLS 72 Query: 63 LKDARQITADLRKLYFSGTDPRTY---FEEKVENSMTVAQCLDYWFDNYVSTTLR 114 LK+AR + R L G +P+ ++K+ +++T+ W++ T++ Sbjct: 73 LKEARNRNEEYRALLQDGHNPKVEKRLRQKKISDAVTLKDLFYLWYEKECKVTIK 127 >UniRef50_P32053 Prophage CP4-57 integrase n=104 Tax=Gammaproteobacteria RepID=INTA_ECOLI Length = 413 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 9/117 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 ++DT+++ KP ++ D DGL++ I G +Q+RY + + G YP Sbjct: 7 PLTDTEIKA--AKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVST 111 ++SL DAR++ A+ + L DP+ + +E+V NS T + W++ ++ Sbjct: 65 AVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTS 121 >UniRef50_A6VC70 Integrase n=11 Tax=Proteobacteria RepID=A6VC70_PSEA7 Length = 395 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 7/108 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D R KP + D GL + + P GV ++YR++ GK + LG YPS+S Sbjct: 2 LTDAHCRA--AKPKEQLYRLNDFRGLYLEVKPNGVKAWRYRFKLAGKGSWFALGDYPSVS 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWF 105 L DAR + RKL G +P + + +++ T W Sbjct: 60 LADARDKCEEARKLVKQGINPVQNRQVERIKREQDSANTFEAVAKEWL 107 >UniRef50_Q2YCS6 Putative uncharacterized protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCS6_NITMU Length = 133 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 7/107 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D +R KP S ++AD G+ + + P G + +YR+ GK RL G YP Sbjct: 1 MKLNDVAVRK--AKPESKSYKMADGGGMYLEVMPNGSKYWWLKYRFGGKEKRLACGVYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLD 102 + L R D KL G DP + + + + + Sbjct: 59 VPLSLVRSWRDDACKLLAQGIDPGANCKSQKTVKQGQEANSFEVIAR 105 >UniRef50_P08320 Integrase n=31 Tax=root RepID=VINT_BPP4 Length = 439 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRY 58 M ++ ++ T KP ++AD GL + +S KG ++ +YR K +RL G + Sbjct: 5 MKLNARQVET--AKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVW 62 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWF 105 P+++L AR + +KL G DP+ +E + T W Sbjct: 63 PTVTLAQARAKRDEAKKLLVQGIDPKVVQKEARAENSGAYTFEAIAREWH 112 >UniRef50_D0BVL9 Phage integrase n=2 Tax=Acinetobacter RepID=D0BVL9_9GAMM Length = 441 Score = 125 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 6/115 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY-RWHGKPNRLGLGRYP 59 + +SD+K KP + D GL + I G ++++Y R +GK + LG +P Sbjct: 6 IPLSDSKC--TGAKPQEKDYSLYDGHGLILFIRKSGSKVWRFKYKRANGKDGLMTLGNFP 63 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTY---FEEKVENSMTVAQCLDYWFDNYVST 111 +LSLK AR +L L +G DP Y + K++N W Y +T Sbjct: 64 ALSLKTARDKRRELETLLANGIDPIEYSEIQKAKLDNKYNFESIAREWHTAYKNT 118 >UniRef50_Q8ECV9 Site-specific recombinase, phage integrase family n=1 Tax=Shewanella oneidensis RepID=Q8ECV9_SHEON Length = 419 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 48/115 (41%), Positives = 61/115 (53%), Gaps = 4/115 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD+ L+ K P E AD DGLSVR+S KG I FQ RYRW R+ +G YP Sbjct: 1 MALSDSWLKANLNKVADKPYEKADRDGLSVRVSAKGAITFQMRYRWASNAARVDIGPYPL 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM----TVAQCLDYWFDNYVST 111 LSLK+AR+ RKL DPR Y +K ++ +V Q W + S Sbjct: 61 LSLKEAREQCEAYRKLLLDNQDPREYKRDKAAKAVSNEGSVEQVFRAWHKSQFSD 115 >UniRef50_C1D8D2 CP4 integrase protein n=12 Tax=Proteobacteria RepID=C1D8D2_LARHH Length = 452 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 23/133 (17%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS- 60 ++ ++ + KP P + +D GL + I+P G ++ YR +GK L +G Y Sbjct: 6 PLTQLAIKNL--KPQDKPYKKSDGGGLYLLINPNGSKYWRMNYRINGKQKTLAIGVYCQF 63 Query: 61 ---------------LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQC 100 +SL DAR R + G DP +E + + + A Sbjct: 64 ALVDDKGKARAEQVIMSLADARLHCDAARAMLAKGIDPFETKQEAKKAANGLSPGSFAYV 123 Query: 101 LDYWFDNYVSTTL 113 W + + Sbjct: 124 AREWHAKMANKWV 136 >UniRef50_A1SRI6 Phage integrase family protein n=2 Tax=Alteromonadales RepID=A1SRI6_PSYIN Length = 416 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 9/116 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 +SDT++R K ++D GL +RI P G +Q R+ KP +G G YP Sbjct: 6 PLSDTQIR--LTKASDKVITLSDGGGLQLRIKPNGSKLWQLRFNKPIEKKPALMGFGAYP 63 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVS 110 ++SL +AR++ +L G +P+ + +++ + T W S Sbjct: 64 AISLANARKLREAANELLAQGINPKAQRDSEIKEKELILNNTFEMVTAAWIKLKAS 119 >UniRef50_Q1R2C9 Integrase-like protein n=9 Tax=root RepID=Q1R2C9_ECOUT Length = 404 Score = 125 bits (314), Expect = 6e-28, Method: Composition-based stats. Identities = 47/117 (40%), Positives = 65/117 (55%), Gaps = 3/117 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD LR++ GK +D DGLSVR+SPKG + FQYRY+W GK RL +G YP+ Sbjct: 1 MALSDAWLRSVVGKERDKVLVKSDRDGLSVRVSPKGRVVFQYRYQWAGKGERLDIGTYPA 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWFDNYVSTTLR 114 LK+AR+ LR S +PR + K +MTV + W++ Y + Sbjct: 61 TGLKEAREEVIRLRGELESNRNPRLVKQAEKRKATEAMTVESVIRAWYEAYCVKNKK 117 >UniRef50_C3XC22 Integrase n=3 Tax=Oxalobacter formigenes RepID=C3XC22_OXAFO Length = 427 Score = 124 bits (313), Expect = 6e-28, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 4/108 (3%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY-RWHGKPNRLGLGRYPS 60 +S +++ KP ++ D GL + + P G ++ ++ + GK +RL LG YP Sbjct: 7 PLSPIQIKNT--KPKEKAYKLFDGGGLYLEVLPSGSKLWRLKFQKPSGKESRLSLGAYPD 64 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNY 108 +SL+ R+ + R+L G DP +E+ E + + D+ Sbjct: 65 VSLEQVRKKREEARRLLAQGIDPSEDRKEQKEAKQE-QDVIRAFKDDR 111 >UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio RepID=B8J055_DESDA Length = 402 Score = 124 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 4/113 (3%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +++ K+R I KP + D +GL + S G ++ +YR +GK RL G +P + Sbjct: 6 KLTEIKIRNI--KPNGKIERFVDGEGLYLETSVAGGKHWRMKYRVNGKEKRLSFGPWPDI 63 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVEN--SMTVAQCLDYWFDNYVSTT 112 SLK+AR++ + ++ DP ++ + + T + ++ S Sbjct: 64 SLKEAREMRDEAKRQLRESLDPSAEKKKAKQEQAAPTFRDIALEYVEHQRSVW 116 >UniRef50_A4JAY4 Phage integrase family protein n=22 Tax=Bacteria RepID=A4JAY4_BURVG Length = 405 Score = 124 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 6/116 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++D K R G ++ D GL + + G +++ +YR++GK N L G YP+ Sbjct: 5 PLTDAKCRNARFDEAGGN-KLFDGGGLYLDLRSSGSKKWRLKYRFNGKENLLTFGDYPAT 63 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVSTT 112 SL DAR + ++L G +P + + + T W++ +T Sbjct: 64 SLADARSRRDEAKRLLAEGKNPAFERDVEKQTRAIAAQNTFEAVALEWYEAQQATW 119 >UniRef50_B9MGW9 Integrase family protein n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MGW9_DIAST Length = 428 Score = 124 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 28/141 (19%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQ-FQYRYRWHGKPNRLGLGRYP 59 MA+SDT +R++ KP +++ D +GL + + G +++ Y+ GK + LG YP Sbjct: 4 MALSDTTIRSV--KPGDPRRQLTDGNGLYLLLYVNGGKHGWRFDYKVQGKRKTISLGTYP 61 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----------------TVAQCLD 102 + SL AR R+L +G DP + K T Sbjct: 62 ATSLSLARAKANAARELVAAGIDPSADRKSKKAAEKKVHEDAKLVAAGKPLNGTFEAVAR 121 Query: 103 YWFD--------NYVSTTLRE 115 WF+ Y LR Sbjct: 122 EWFEVRSPEWAAKYAEKVLRR 142 >UniRef50_P37317 Integrase n=42 Tax=root RepID=VINT_BPSFV Length = 385 Score = 124 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 3/110 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++ ++ KP P + D +GL + + G +Q RY+ GK L +G+YP ++ Sbjct: 2 LTVKQIEA--AKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMT 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTT 112 L++AR RK G DP ++ N+ + + W+D+ Sbjct: 60 LQEARDKAWTARKDISVGIDP-VKAKKASSNNNSFSAIYKEWYDHKKQVW 108 >UniRef50_Q1N9F3 Putative integrase prophage protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9F3_9SPHN Length = 443 Score = 124 bits (312), Expect = 8e-28, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 7/110 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++ +++ KP + +AD+ GL + ++ G ++YRYR K L LGRYP Sbjct: 1 MSLTIVEIKN--AKPQASDYRLADSQGLFLHVTSAGGKFWRYRYRIGPKEKTLTLGRYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWF 105 + L AR+ + RKL G DP ++ +T + + W Sbjct: 59 MGLVAAREAHHEARKLVSEGKDPALEKQKAKIARIEAAKITFRKLAEEWL 108 >UniRef50_A5PCI3 Phage integrase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCI3_9SPHN Length = 325 Score = 124 bits (312), Expect = 8e-28, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 3/116 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+S ++ K P ++AD DGL + +SP G ++ YR+ GK L GR+P+ Sbjct: 1 MALSAVAIKA--AKSRDKPYKLADRDGLYLEVSPTGARSWRMNYRYLGKQKTLTFGRWPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE-EKVENSMTVAQCLDYWFDNYVSTTLRE 115 + L DAR+ R++ G DP + E++ S+ A + + Y++ +E Sbjct: 59 VGLADARKKCDAAREVLARGDDPGEQAKLERIAASVASASSFEAVAEEYLAKIEKE 114 >UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepID=C9NQJ4_9VIBR Length = 415 Score = 124 bits (312), Expect = 9e-28, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 9/117 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 ++ TK+++ KP + D DGL +RI P G + Y + K L LG+YP Sbjct: 7 KLTPTKIKS--SKPKDKEYNLFDGDGLRLRIKPNGSKHWILNYYRPSNRKRANLSLGKYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNYVST 111 LSL +AR++T + ++L G DP+ E+K + T WF+ Sbjct: 65 DLSLANARKMTLEAKELLAQGIDPQEERKRHQLEQKANHEHTFINVTTKWFEIKKDD 121 >UniRef50_A5EUW8 Bacteriophage P4-like integrase n=3 Tax=root RepID=A5EUW8_DICNV Length = 399 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 4/110 (3%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD KLR + KP ++AD+ GL + P G I ++ RY GK L LG+YP++S Sbjct: 2 LSDAKLRKL--KPTEKKYKIADSHGLFAVVMPNGSILWRMRYVLAGKRRELALGKYPAVS 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEE--KVENSMTVAQCLDYWFDNYVS 110 L +ARQI R+ G DP E K ++ +TVA+ ++ Sbjct: 60 LSEARQIVLLYREQIERGVDPHAQHVERHKKQDGVTVAEAVELLLSEKAK 109 >UniRef50_P06155 Integrase n=9 Tax=root RepID=VINT_BPPH8 Length = 402 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 3/110 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 I+DTKLR GK + ++D+ GL+ RIS G I F YRYRW GK +L +G YP++S Sbjct: 7 ITDTKLRKALGKKRDDIEIISDSHGLNARISQAGKISFFYRYRWAGKAVKLNVGDYPAMS 66 Query: 63 LKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWFDNYV 109 + AR+ R G DPR ++ + +M+VA+ +YW + + Sbjct: 67 ITQARERRQQFRNWLTEGLDPREQVKLDKQTRQEAMSVAEAFNYWIERHC 116 >UniRef50_A7MWW9 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7MWW9_VIBHB Length = 410 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 9/112 (8%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 +S T+++ + K + + D DGL +RI P G + + Y K +GLG+YP Sbjct: 7 PLSATQVKNL--KSQAKEFSIGDGDGLLLRIMPNGTKSWLFNYIHPSTKKRKNIGLGKYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYWFD 106 +SL AR+ +R+L G DP+T+ + EK+ T+ WF+ Sbjct: 65 DVSLATAREQRQTMRELVAKGIDPKTHRDNQQTAEKLAAQDTLLHVAKEWFE 116 >UniRef50_B3A9A3 Prophage integrase n=2 Tax=Escherichia coli O157:H7 RepID=B3A9A3_ECO57 Length = 412 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 9/121 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 ++ T+++ + KP V D GL + +S G +++RY K +GR+P Sbjct: 5 PLTVTEVKGM--KPREKDYAVYDGFGLLLNVSKAGGKVWRFRYSHPITKKRQTYTIGRFP 62 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTTLR 114 SL +AR++ +LR++ G DP T + + +N T + WF + LR Sbjct: 63 EFSLAEAREVRDELRRMIARGVDPVTEKKNRKIEMSLKNLQTFEAVANAWFAFKKGSELR 122 Query: 115 E 115 + Sbjct: 123 K 123 >UniRef50_C6RLT7 Phage integrase n=2 Tax=Acinetobacter radioresistens RepID=C6RLT7_ACIRA Length = 405 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 7/118 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D K++ + K VAD GL + + G ++YRYR+ P L +G YP +S Sbjct: 2 LNDLKIKQLKAK--DKMYRVADHAGLCLEVRTTGSKFWRYRYRYLNIPKMLTIGPYPEIS 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWFDNYVSTTLRE 115 L AR T + R + DP T ++ ++++M T + + + Y T +E Sbjct: 60 LSYARDKTREYRGMLAKNLDPVTEQKKALDSAMDAIQHTFKSISNEYLEKYKDTHSQE 117 >UniRef50_A1VQL7 Phage integrase family protein n=2 Tax=Burkholderiales RepID=A1VQL7_POLNA Length = 413 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 14/127 (11%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D + + D G+ + ++ G ++ YR+ GK L LG YP+ Sbjct: 1 MPLTDIFTKNTKHSGAPAGDKHTDGGGMYLLVTKAG-KYWRMNYRFAGKRKTLALGVYPA 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDY--------WFDN 107 +SL +ARQ RKL DP +E + + T W + Sbjct: 60 VSLAEARQGRDKARKLLAQDIDPSAAKQEDRQATATAAANTFEAVAREFHALKAGGWSEG 119 Query: 108 YVSTTLR 114 + + LR Sbjct: 120 HATKWLR 126 >UniRef50_A1TYD6 Phage integrase family protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TYD6_MARAV Length = 412 Score = 122 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 6/117 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +++T ++ Y ++AD GL + I G ++ +YR+ GK L LG YP + Sbjct: 7 KLTETAVKHATFSKYGKRTKLADGAGLYLDIQKAG-RYWRLKYRYGGKEKLLALGVYPDV 65 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVSTTL 113 SLK+AR + ++L DP T+ + + + T W ++ + Sbjct: 66 SLKEARAKRDEAKRLLADNIDPVTHRQREKAERVEATATTFKGIALEWLEHVHKKNV 122 >UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella RepID=A5I9N5_LEGPC Length = 407 Score = 122 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 3/114 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +DT +R + K E + G +RI+P V + YRY+ +G + LG YP++S Sbjct: 4 FTDTYIRNLKAK--EKRYEEFEGGGFGIRITPNNVKTWIYRYKINGVTTKFTLGHYPAMS 61 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVE-NSMTVAQCLDYWFDNYVSTTLRE 115 L +A++ +L ++ G DP+T + + E ++ TV + W+ NY+ ++ Sbjct: 62 LSNAKRRFLELSQMRREGVDPKTVIQAQEEQDNNTVDKLALNWYTNYIEKHVKR 115 >UniRef50_B8F555 CP4-57 prophage, integrase n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F555_HAEPS Length = 405 Score = 122 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 9/115 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPS 60 + DT+++ K P + D GL + +S G +++ Y K ++ LG YP+ Sbjct: 8 LVDTEIKK--AKAKDKPYTLTDGGGLFLLVSITGSKSWRFNYYQPITKKRTKMALGMYPT 65 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVS 110 ++L AR + + +KL DP+ Y + K + T + W + Sbjct: 66 VNLSKARALRDEYKKLLADDIDPQQYIKNKQQEKLQETQNTFLAIAEQWKQKKSA 120 >UniRef50_C8NCE3 Phage integrase family site-specific recombinase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCE3_9GAMM Length = 401 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 8/117 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG--KPNRLGLGRY 58 MA+++T+ RT P ++ D GL ++++ G ++ YR G K + G Y Sbjct: 1 MALTETQCRTAAA-PDKNVRKYFDGGGLCLQVTSDGKKYWRLYYRMPGSKKQQTVSFGVY 59 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVS 110 P +SLK ARQ +++ L G DP+ ++ ++ T A W ++ Sbjct: 60 PKVSLKQARQRRDEVKLLIARGIDPKLAAKQLRQDRTVALENTFADVAKRWLEHRAE 116 >UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IRV8_BORPD Length = 402 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 11/112 (9%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 A+SD ++ +P P ++AD GL + + P G ++Y++R GK +GRYP + Sbjct: 9 ALSDRAVKN--ARPKDAPYKLADGGGLHLLVQPNGSRLWRYKFRLGGKEQVFAIGRYPDV 66 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFE---------EKVENSMTVAQCLDYW 104 L +AR+ R+L G P + T LD W Sbjct: 67 GLAEARERHLAARRLVADGVSPTAQRRDDRARMAEDAARAKAGTFKAVLDSW 118 >UniRef50_A6Q4N1 Site-specific recombinase, phage integrase family n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q4N1_NITSB Length = 412 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 8/119 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++D +LR KP ++ D +GL + I P G F+ Y + GK N +G YP + Sbjct: 7 PLNDLQLRN--AKPKEKNYKLRDGEGLYILIKPNGRKIFRLDYVYAGKRNTYTIGDYPQI 64 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVE------NSMTVAQCLDYWFDNYVSTTLR 114 SL AR+I ++++L +G DP Y +E+ N + ++ + + + Sbjct: 65 SLAQARKIKYEVKELIKNGIDPNRYKQEQKRIKELEANKKFTSFVIERFIQHKAKEVSK 123 >UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria RepID=B2I529_XYLF2 Length = 410 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 5/110 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT L+ + KP VAD GLSV + P G I +++RYR G+ +L LG+YP+ Sbjct: 1 MPLTDTALKAL--KPRDRIYSVADERGLSVEVYPTGGIVWRFRYRLAGRYEKLTLGKYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV---ENSMTVAQCLDYWFDN 107 LSL++AR + L GT P + ++MTV + +F Sbjct: 59 LSLRNARLKRDEAASLVAMGTSPARQKQLAKVTAADAMTVRDFAERFFRE 108 >UniRef50_A4F5J8 Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=A4F5J8_9BACT Length = 390 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 57/110 (51%), Gaps = 4/110 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D ++ + KP +VAD DGL + ++P G + F++ YR++ + + LG+Y Sbjct: 1 MALTDKAIKAL--KPGEKTYKVADRDGLYLSVAPSGTMSFRFNYRYNNRQQTVTLGKYGE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVS 110 ++L AR+ + +G P +++++N++ W D Y Sbjct: 59 ITLAQAREKLLKAKADLAAGISP-AKKKQEIKNTL-AENSFSVWLDKYTE 106 >UniRef50_C6E138 Integrase family protein n=1 Tax=Geobacter sp. M21 RepID=C6E138_GEOSM Length = 433 Score = 121 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 5/116 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +DT +R + KP + ++ +G ++R+ P G + Y Y +GK +GLG YP ++ Sbjct: 8 FTDTMIRKL--KPDTNEYRKSEGNGFTIRVMPSGFKSWLYLYAINGKRRCMGLGHYPDVT 65 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWFDNYVSTTLRE 115 L+ AR +K+ +G DP EE+ E ++TV Q D + + RE Sbjct: 66 LETARDRFEAAKKMVKNGMDPLDAKEEEQEQHRKALTVKQLFDDYLVRHAKLNKRE 121 >UniRef50_Q0I4F8 Integrase n=1 Tax=Haemophilus somnus 129PT RepID=Q0I4F8_HAES1 Length = 413 Score = 121 bits (304), Expect = 9e-27, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 8/115 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR-WHGKPNRLGLGRYPSL 61 +++TK+ + KP ++D GL + + G +++ Y K + LG YP Sbjct: 8 LTNTKI--LNAKPKDKDYTLSDGQGLYLLVKSNGSKLWRFNYYDLLKKRKLISLGSYPET 65 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVST 111 SL DAR + R L +P+ Y ++ E + T+ W + S Sbjct: 66 SLLDARTKRDEYRALLAKDIEPQDYIFKQKEQAIFNQCNTLIGVAKDWREMKSSK 120 >UniRef50_D0SJJ0 Phage integrase n=6 Tax=Acinetobacter RepID=D0SJJ0_ACIJU Length = 406 Score = 120 bits (303), Expect = 9e-27, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 7/108 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SDTK++ + KP + DA+ L + + P G ++ +Y H K + LG YPS+S Sbjct: 2 LSDTKIKNL--KPQEKMYRILDAERLYIEVRPTGKKVWRLKYTLHSKEGTISLGEYPSVS 59 Query: 63 LKDARQITADLRKLYFSGTDP-----RTYFEEKVENSMTVAQCLDYWF 105 L +AR+ +++ L G +P + + E + NS T + + Sbjct: 60 LAEARKKKEEIKVLLKDGINPVQEKRKLHQENLIANSNTFKAIAEEYI 107 >UniRef50_A1WLK0 Phage integrase family protein n=4 Tax=Burkholderiales RepID=A1WLK0_VEREI Length = 421 Score = 120 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 5/115 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D + ++DA GL + +SP G ++ ++YR+ G+ RL LG YP + Sbjct: 2 LTDKHCKNALCPADKQRVRLSDAAGLYLEVSPSGSKRWFWKYRFDGREKRLALGVYPDVP 61 Query: 63 LKDARQITADLRKLYFSGTDPRTYFE-EKVEN----SMTVAQCLDYWFDNYVSTT 112 LKDAR D RK + G DP + E++ N T + + Sbjct: 62 LKDARTARDDARKQHQRGVDPVLERQLERLSNRSDPEATFEVVAREFHTTKKRSW 116 >UniRef50_Q5E028 Phage family integrase n=2 Tax=Vibrionaceae RepID=Q5E028_VIBF1 Length = 399 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 9/118 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRY 58 + ++D K+++ P ++D +GL +R+ P G +Q+++ K ++ LG Y Sbjct: 6 IRLTDRKIKSAA--PTGKEFTLSDGEGLQLRVRPTGAKSWQFKFSDPVTRKIQKIALGPY 63 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRT-----YFEEKVENSMTVAQCLDYWFDNYVST 111 P LSL +AR T + R L +P++ E K + T + WF+ T Sbjct: 64 PELSLANARSKTTEYRTLLAQKINPKSFEQSKELEAKRVQTSTFIVVAEQWFERKKET 121 >UniRef50_A6F4S5 Putative integrase n=1 Tax=Marinobacter algicola DG893 RepID=A6F4S5_9ALTE Length = 437 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 7/115 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 I+DTK R K +AD+ GL++ I P G ++YRYR HGK +G YP+++ Sbjct: 2 ITDTKARK--AKAKDTTYRLADSGGLALEIRPSGSKFWRYRYRLHGKAGMYTVGEYPTIT 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNYVSTT 112 + +AR I +K +G P E + E + T+ + W + Sbjct: 60 ISEARAIRDWAKKCVANGEAPAEVKKRELAERRAEQANTLEEVGKEWIARNKAGW 114 >UniRef50_B4RZR6 Prophage CP4-like integrase n=2 Tax=Proteobacteria RepID=B4RZR6_ALTMD Length = 412 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D +++ + + D GL + + G ++ +YR+ GK L +G YP Sbjct: 1 MPLTDIQIKQAQA--STKDIWLTDEKGLRLLVKKNGSKYWRLKYRFQGKQKTLAIGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTT 112 +SLKDAR+ ++ R+ DP +EK W++ Sbjct: 59 VSLKDAREAVSEARRQLRDDIDPSAIKQEKKHLSSVSEIELFNTQARLWWNKQKGQW 115 >UniRef50_UPI00019048C6 phage integrase n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019048C6 Length = 174 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D ++R K P ++ D GL + +S G ++ Y + GK L LG YP+ Sbjct: 1 MALTDVQIRN--AKKSEKPYKLPDGKGLYLYVSTAGGKSWRLDYAYFGKRKTLTLGAYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDP-----RTYFEEKVENSMTVAQCLDYWFDN 107 + L +AR + +K G DP R K T D + Sbjct: 59 IGLAEARSRRDEAKKKLSEGLDPSLAKKREQLAAKAAAGNTFGLIADEFIAK 110 >UniRef50_C3NUM0 Phage Integrase n=55 Tax=root RepID=C3NUM0_VIBCJ Length = 413 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 3/118 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+S + L K AD DGLS R+SPKG I FQ+RYR+ GK R+ +G YP Sbjct: 1 MALSVSWLDARLNKEAKETVVKADRDGLSARVSPKGKIVFQFRYRFDGKQQRVDIGTYPL 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEE---KVENSMTVAQCLDYWFDNYVSTTLRE 115 + L +AR LR + G +P+ Y ++ K + + W D+ L+E Sbjct: 61 MKLAEARNELDRLRAVLDQGRNPKLYLQQERAKYSANQSFESIFRDWIDSAGKQGLKE 118 >UniRef50_A3ZAX6 Prophage CP4-like integrase n=2 Tax=Synechococcus RepID=A3ZAX6_9SYNE Length = 426 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 5/115 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD ++ + P + D DGL + ++ G ++ YRW G +G YP++ Sbjct: 2 LSDKAIQALRPDPDRPGTKHHDRDGLYLWVARSGSKTWRKDYRWQGARRTFTIGPYPAVR 61 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVSTT 112 L DAR+ +L +G DPRT + N S Q WF+++ ++ Sbjct: 62 LADARKQALELNTWIKAGIDPRTQVPTQQRNQAESSSRPFVQIAQAWFEHHSASW 116 >UniRef50_B1Y4T5 Integrase family protein n=3 Tax=Betaproteobacteria RepID=B1Y4T5_LEPCP Length = 427 Score = 119 bits (300), Expect = 3e-26, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 19/132 (14%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRI------SPKGVIQFQYRYRWHGKPNRLGLG 56 ++DT+ R +ADA GL + + +P G ++++YR GK L +G Sbjct: 2 LTDTECRNAKCPEGRAFVRLADAGGLYLEVKPPGAKTPSGSKLWRWKYRHGGKEKLLAIG 61 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWF------ 105 YP++S+ AR+ A R L +GTDP +E E+ + W+ Sbjct: 62 AYPAVSVAGARREQAKARALLDAGTDPGEARKEAKYAKLNEHETSFEAVARQWWAGWKAN 121 Query: 106 --DNYVSTTLRE 115 + Y LR Sbjct: 122 KTERYAEYVLRR 133 >UniRef50_B7NKE6 Integrase of prophage n=42 Tax=Enterobacteriaceae RepID=B7NKE6_ECO7I Length = 416 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 56/118 (47%), Gaps = 7/118 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGK----PNRLGLGR 57 +SDT+LR I G P + D LSVR S G++ + + YR P R+ LG Sbjct: 14 KLSDTQLRKINGTPAQKTAFLNDGGNLSVRHSTSGLLTWYFTYRAGTGRGAPPERIKLGN 73 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWFDNYVSTT 112 YP LSLK AR+ A R G +PR V+ ++ TV L YW ++Y Sbjct: 74 YPDLSLKSAREKAAQCRAWLAEGKNPRHELNYTVQEALKPVTVGDALTYWLESYAKEN 131 >UniRef50_A4VPC8 Site-specific recombinase, phage integrase family n=6 Tax=Proteobacteria RepID=A4VPC8_PSEU5 Length = 455 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 5/98 (5%) Query: 1 MA---ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGR 57 M ++D K++++ KP +++D GL + + P G ++++YR GK N +G Sbjct: 53 MPENLLTDAKIKSV--KPTDRDWKLSDGGGLFLLVKPTGCKLWRWKYRLQGKENLFAIGS 110 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM 95 +P +SL +AR R L G P ++ + ++ Sbjct: 111 FPQVSLAEARTAREKARALVKQGIHPAHERQQVKQRNL 148 >UniRef50_B9NUX0 Site-specific recombinase, phage integrase family n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NUX0_9RHOB Length = 404 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 2/91 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D L+ + +P + +DA GL + + P G + YR+ GK + G YP Sbjct: 1 MPLTDIALKNM--QPSGRAYKRSDAHGLYILVKPNGSKHWHLHYRFLGKQKVMSYGPYPL 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV 91 +SLK+AR+ RK G DP +E+ Sbjct: 59 ISLKEAREKRDRDRKFLIEGIDPMVVKKERK 89 >UniRef50_Q483M1 Site-specific recombinase, phage integrase family n=3 Tax=Gammaproteobacteria RepID=Q483M1_COLP3 Length = 390 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 2/114 (1%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SDTKLR I PY+G E+AD DGLSVR+SPK +I F YR+RW GK R+ LGRYP Sbjct: 1 MALSDTKLRKIKA-PYNGEAELADRDGLSVRVSPKALITFNYRFRWEGKQQRIKLGRYPG 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 L L DAR+ + R G DPR E +++ + + YV T LR Sbjct: 60 LKLIDARKKVNEYRHNLDEGLDPRVVQNESRSHNL-FGDMCEAFMTKYVMTELR 112 >UniRef50_A1WW57 Phage integrase family protein n=4 Tax=Proteobacteria RepID=A1WW57_HALHL Length = 412 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 19/131 (14%) Query: 2 AISDTKLRTIYGKPYSGPQ--EVADADGLSVRISPKGVIQFQYRYRW-HGKPNRLGLGRY 58 ++D + RT KP G Q ++ D GL + + G Q+Q+RYR G+ +GLG Y Sbjct: 7 KLTDRQCRT--AKPPEGKQQLKLTDGGGLVLLVKSNGGKQWQFRYRRPSGREATMGLGVY 64 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEK-----VENSMTVAQCLDYWFD------- 106 P + L AR+ + R L G DP + + ++ + W+D Sbjct: 65 PDVPLSKARERRDEARALLADGIDPIDQRKAQRSAAASADTHSFEAVAREWWDAVHRHKV 124 Query: 107 --NYVSTTLRE 115 ++ + LR Sbjct: 125 VASHANRNLRR 135 >UniRef50_D1B120 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B120_SULD5 Length = 419 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 18/123 (14%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY-RWHGKPNRLGLGRYP 59 + ++DT+L+ K + D GL + + P G ++ Y R +G N + LG YP Sbjct: 6 LPLTDTELKK--SKIQEKTYRLTDGAGLYLLVEPNGSKGWRLDYTRPNGGRNTISLGTYP 63 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFE---------------EKVENSMTVAQCLDYW 104 +++L +AR+ +L+K G DP + E+ T + + Sbjct: 64 TITLCEAREKRDELKKQIKKGVDPSLERKGVKELQREEKEADHAEEERKQNTFEKVARDF 123 Query: 105 FDN 107 F++ Sbjct: 124 FES 126 >UniRef50_C4GIW0 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIW0_9NEIS Length = 394 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 6/116 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D + + P G ++++D GL ++I KG ++ +Y ++ K + LG YP+ Sbjct: 1 MKLTDNQCKHTPP-PDKGVKQLSDGGGLYLQIDAKGRRYWRIKYTYNQKQHTQHLGIYPA 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVST 111 + LK AR ++ L G +P+T+ E++ + T W Sbjct: 60 MPLKAARMERDKIKLLLSQGINPKTHQEQQQRAEQKRITNTFEHVARKWHTTKAEK 115 >UniRef50_Q0F3U9 Prophage CP4-like integrase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3U9_9PROT Length = 228 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD ++ +++D GL + + P G ++ YR+ GK L LG YP+ Sbjct: 1 MALSDEQVNEASIPEGKKQLKISDGGGLYLLVKPSG-RYWKLAYRFDGKQKSLALGVYPA 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDY 103 +SL DARQ + L G DP +++ ++ Sbjct: 60 VSLDDARQKREQAKSLLADGVDPGVVKQQQKRRAVATETVTTQ 102 >UniRef50_A5V414 Phage integrase family protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V414_SPHWW Length = 417 Score = 118 bits (297), Expect = 4e-26, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 9/114 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++ ++ K +G +++D GL++ + P G ++ +YR+ GK L LG +P Sbjct: 1 MPLT--HIQIAAAKASNGALKLSDGRGLTLVVQPSGSKVWRLKYRYEGKQKTLHLGHWPK 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYF-------EEKVENSMTVAQCLDYWFDN 107 + + +AR D RKL GTDP + K+ + + W + Sbjct: 59 VGISEARIRREDARKLIEEGTDPALVKRFGPVAAKVKIVAGNSFRAVAEEWLEK 112 >UniRef50_B7N6K6 Prophage CP4-57 integrase n=8 Tax=Enterobacteriaceae RepID=B7N6K6_ECOLU Length = 415 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 9/118 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 +++ ++ KP S E+ D +GL + + G + + Y K + LG YP Sbjct: 7 PLTNVEI--AGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNYVSTT 112 ++L AR+ R+L + G DPR + E++++N T+ + + W T+ Sbjct: 65 VVTLAMARETRTKYRRLLWQGIDPRQHLAGIAEEKRLQNECTLEKVAEQWLKEKKRTS 122 >UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID=B2UB26_RALPJ Length = 415 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 12/120 (10%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++ T++ KP P ++ D GL V + P G ++Y+Y GK + +G YP + Sbjct: 7 KLTPTRINN--AKPKEQPYKLTDGGGLFVLVHPGGSKAWRYQYMLSGKRRSVLIGSYPEI 64 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKV----------ENSMTVAQCLDYWFDNYVST 111 + DAR A+ R + GTDP + + E+ W D ++T Sbjct: 65 GVSDARDRHAEYRAMVEQGTDPAEHRRQDKAERKAKESLQEDEGLFKAFSLKWIDERLAT 124 >UniRef50_Q4QNN7 Prophage CP4-57-like integrase n=4 Tax=Haemophilus influenzae RepID=Q4QNN7_HAEI8 Length = 403 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 9/116 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 + DT+++ K + P + D GL + ISP G +++ Y K ++ LG YP Sbjct: 7 PLVDTEIKK--AKASNKPYTLTDGYGLFLIISPTGSKSWRFNYYRPITKKRAKISLGLYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEK-----VENSMTVAQCLDYWFDNYVS 110 +++L AR++ R+L + DP+ Y ++ + T W VS Sbjct: 65 AITLSKARELREQYRQLLANKIDPQEYIKQHELLQLQRQNNTFFAISTQWKQKKVS 120 >UniRef50_A3M8T8 Phage integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M8T8_ACIBT Length = 425 Score = 118 bits (296), Expect = 7e-26, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 7/112 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 + DT+++ + KP P DAD L + + P G + +++ + K + G YPS+S Sbjct: 2 LKDTQVKNL--KPQDKPYRKLDADRLYIEVRPSGKKVWIHKFSLNKKEGSITYGEYPSIS 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNYV 109 L +AR A R L G +P + E T + D W + + Sbjct: 60 LAEARYYHARDRALLAKGINPVAHRNETARLALETEQETFKKYGDEWKEKHK 111 >UniRef50_A1SXI0 Phage integrase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SXI0_PSYIN Length = 216 Score = 118 bits (296), Expect = 7e-26, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 7/115 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 +++ ++ P + D +GL + + PKG ++Y Y + K LGLG YP Sbjct: 17 PLTEQEIEG--ATPKEKEYNLGDGNGLYLYVRPKGTKSWKYNYTHPYTKKRANLGLGVYP 74 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 +++L+ AR + + L + DP+ + + K++ V Q Y FDN V+ L+ Sbjct: 75 NVTLEQARMVRDEFNSLLANNIDPKKHRDAKIKEETEVNQ---YLFDNVVNDWLK 126 >UniRef50_A7ZQ61 Phage integrase family protein n=32 Tax=Gammaproteobacteria RepID=A7ZQ61_ECO24 Length = 436 Score = 117 bits (295), Expect = 8e-26, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 12/121 (9%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISP---KGVIQFQYRY--RWHGKPNRLGLG 56 ++DT++++ KP + D DGL +RI+P G + +RY K ++ LG Sbjct: 34 KLTDTEIKST--KPAEKEVNLFDGDGLLLRIAPLAKGGKKNWYFRYAVPVTKKRTKVSLG 91 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNYVST 111 YP L+L AR + + L +G DP+ + +K T W D V T Sbjct: 92 TYPHLTLAKARALRDEYLSLLTNGIDPQVHNNQKANALKDATEHTFQAVAKKWLDEKVKT 151 Query: 112 T 112 + Sbjct: 152 S 152 >UniRef50_Q083S5 Phage integrase family protein n=3 Tax=Shewanella RepID=Q083S5_SHEFN Length = 403 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 46/90 (51%), Positives = 64/90 (71%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M++SDT+LR+I GKPY+G E+AD DGLSVRIS G I +QYR+R+ RL LGRYP Sbjct: 1 MSLSDTQLRSINGKPYTGKPEIADRDGLSVRISNAGTITWQYRFRFRSSVGRLTLGRYPD 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEK 90 + L +AR+ +LR + TDPR Y++++ Sbjct: 61 VKLSEARKFVPELRNALANDTDPRVYWKQR 90 >UniRef50_Q93UI5 Integrase-like gene 1 n=1 Tax=Escherichia coli RepID=Q93UI5_ECOLX Length = 401 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 10/117 (8%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D K+R++ P AD G+ ++I+ G ++ +YR GK L G YP Sbjct: 1 MPLTDLKVRSLTT-----PGRYADGGGMYLQITASGGRYWRMKYRHGGKEKLLAFGVYPL 55 Query: 61 LSLKDARQITADLRKLYFSGTDP-----RTYFEEKVENSMTVAQCLDYWFDNYVSTT 112 + +K+AR ++ G DP F+ + + + T + W D+ Sbjct: 56 VGIKEARDKLFYAKQALSRGEDPGATKKLAKFQAEQDAANTFKAVAEDWLDHQAGRW 112 >UniRef50_Q4QL03 Prophage CP4-57-like integrase n=11 Tax=Haemophilus RepID=Q4QL03_HAEI8 Length = 419 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 9/111 (8%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 +S T++ KP ++D GL + + G ++++Y K + LG YP Sbjct: 11 PLSITEINN--AKPKEKDYSLSDGQGLFLLVKMNGSKIWRFQYYKPISKKRTLISLGVYP 68 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWF 105 +SLKDAR+I R L DP+ Y ++ + ++ T+++ W Sbjct: 69 EISLKDAREIRDLYRSLLAKNIDPQDYRLQQEQKAIQERQFTLSEMGKEWL 119 >UniRef50_B7MX56 Integrase from prophage n=96 Tax=Gammaproteobacteria RepID=B7MX56_ECO81 Length = 419 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 9/119 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 ++ +++ +P + D GL + + P G +++ Y K L G Sbjct: 13 PLTTVQIKA--ARPAQKEYTLQDGGGLFLLVKPSGSKLWRFSYYRPSDKKRILLSFGSLE 70 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVSTTL 113 +SL DAR+ ++ R L +GTDP+ + +K E T W+ +S L Sbjct: 71 DVSLADARKRRSEYRTLISAGTDPQDHERQKRETEARRQGNTFENVAAAWYQVKISQNL 129 >UniRef50_B6BKY5 DNA integration/recombination/inversion protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKY5_9PROT Length = 400 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 58/117 (49%), Gaps = 9/117 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +++T+++ K ++D GL + ++ G +++RY+++ K ++ LG YP Sbjct: 7 PLTETQIKN--AKAKEKTYILSDGAGLYLEVNINGGKWWRFRYKYNDKIKKVSLGVYPDT 64 Query: 62 SLKDARQITADLRKLYFS-GTDP----RTYFEEKVENSMTVAQCLDYWFDNYVSTTL 113 +L +AR+ + R + + DP + +E+V T + + W+ +ST L Sbjct: 65 TLANARRKRDEARNILANDNRDPFIKIVVHKKEEVVQK-TFQEWAE-WYITEISTEL 119 >UniRef50_B7I6Z3 Site-specific recombinase, phage integrase family n=3 Tax=Moraxellaceae RepID=B7I6Z3_ACIB5 Length = 414 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 10/122 (8%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 ++DTK++ + +++D GL + I +++ Y + K N +G G YP Sbjct: 7 PLTDTKIKKAKSENG-KSLKLSDGSGLYLLIDKNQNKFWRFDYSRPYTKKRNTIGFGSYP 65 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNY--VSTT 112 +SL DAR + R L DP+ + + T A W +T Sbjct: 66 EVSLADARSKRDEARTLLAQNIDPQVERKRVEQEHINSEKNTFAAVAAEWESKQDFAEST 125 Query: 113 LR 114 +R Sbjct: 126 IR 127 >UniRef50_A9I0E1 Phage-related integrase n=5 Tax=Burkholderiales RepID=A9I0E1_BORPD Length = 536 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 8/114 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +S+T+++ KP + D D L +R+ G + YRY KP +LG+G YP ++ Sbjct: 103 LSETQIKA--AKPGQKEYMLNDGDNLYLRVRITG-KAWIYRYMKDSKPIKLGMGPYPEVT 159 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVST 111 L AR + +G DP+ E+ E + T W + Sbjct: 160 LAQARTKAYEANSQRANGLDPKEVREQLAEQTRIARLHTFELLARAWHASAKKD 213 >UniRef50_Q74H29 Integrative genetic element Gsu32, integrase n=1 Tax=Geobacter sulfurreducens RepID=Q74H29_GEOSL Length = 439 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 55/112 (49%), Gaps = 5/112 (4%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 SD LR + KP P ++ + DG VR+ P G F Y Y + GK L LG+YP L Sbjct: 7 KFSDKFLRAL--KPQEKPYDIREGDGFGVRVFPSGARSFFYMYHFDGKRRFLNLGKYPQL 64 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKV---ENSMTVAQCLDYWFDNYVS 110 SL DARQ D + G DP +E+ ++TVA +D + N+ Sbjct: 65 SLADARQKHRDAVSQHAKGIDPLAATQEQKRERREAITVADLIDEYVKNWAK 116 >UniRef50_B0QT04 Prophage CP4-57-like integrase n=1 Tax=Haemophilus parasuis 29755 RepID=B0QT04_HAEPR Length = 304 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 11/116 (9%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH----GKPNRLGLGR 57 +++T++ KP + D GL +R+ G + + Y K LG+G Sbjct: 7 PLTNTEVEK--AKPKDKDYSLMDGQGLFLRVKANGKKFWLFNYYKPFSTPPKRTNLGIGA 64 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNY 108 YP +SL AR I + R L DP+ + EE + T W + Sbjct: 65 YPEISLAQARLIRDEWRALLAKNIDPKVHRQNIVDEEISKRENTFEAVAKKWREKK 120 >UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NM52_9DELT Length = 406 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 5/109 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD +LR I +P E+ D GL + + P G + RY++ GKP R+ LG YP Sbjct: 1 MGLSDAQLRKI--RPRESRFELTDGKGLVLLVLPSGRRSWLLRYQFEGKPRRITLGEYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV---ENSMTVAQCLDYWFD 106 +SL AR + R + G DP E+ + S TV+ L ++D Sbjct: 59 MSLLQARNASEATRSIIKQGLDPALKRTEEKTAHKTSPTVSDLLTEYWD 107 >UniRef50_A4SSF4 Phage integrase n=3 Tax=Proteobacteria RepID=A4SSF4_AERS4 Length = 404 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 6/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D R ++AD GL + ++ G ++ +YR GK +L LG YP Sbjct: 1 MPLTDITARQAKWSGKPNGDKLADEKGLFLLVNKSG-KYWKLKYRHGGKEKKLALGVYPE 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVSTT 112 +SL++AR + R++ G DP ++ S ++ W + + Sbjct: 60 VSLREARAKRDEARRVIAEGIDPGLVRKQSKVASRLVSENSLEVLAREWHQSQFALW 116 >UniRef50_A0KW55 Phage integrase family protein n=30 Tax=Gammaproteobacteria RepID=A0KW55_SHESA Length = 411 Score = 115 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 10/118 (8%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 ++ + + K + P ++D L + + G +++RY KP GLG YP Sbjct: 7 KLTAKAV--LNAKAEAKPYRLSDGGNLYLYVRTAG-KTWEFRYIRPSTSKPTYFGLGSYP 63 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNYVSTT 112 +SL +AR + RK G DP+ + EN+ T+ W D+ + Sbjct: 64 DVSLAEARDKALEARKNLAEGIDPQLLKVENKLKAATENAQTLKHIAQMWMDSKQGSI 121 >UniRef50_Q1NEP8 Putative integrase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEP8_9SPHN Length = 156 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 40/93 (43%) Query: 12 YGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITA 71 +P ++ D GL + + P G ++ Y + GK L G +P + L DAR+ Sbjct: 27 SARPREREYKLTDGAGLYLLVKPNGRKLWRLNYAYLGKQRTLSFGAWPDVGLADARERRD 86 Query: 72 DLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYW 104 + RKL +G DP + +M + W Sbjct: 87 EARKLIAAGLDPSHEAKLAEARAMLSEETASSW 119 >UniRef50_D0CDZ4 DNA integration/recombination/inversion protein n=4 Tax=Acinetobacter RepID=D0CDZ4_ACIBA Length = 402 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 +S +++ P + +++D L +RI G + + Y + GK N L LG YP Sbjct: 8 KLSALQVKKAKPDP-NKMYKLSDGGNLYLRIDQSGSKYWIFNYTRPFLGKRNDLSLGTYP 66 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNY 108 +SL+DAR I +KL G DP +++ E T + W Sbjct: 67 EVSLEDARTIRDKYKKLIKQGIDPAMERIETKSQKQKEAENTFRVIAELWLHKR 120 >UniRef50_Q1Q875 Phage integrase n=3 Tax=Gammaproteobacteria RepID=Q1Q875_PSYCK Length = 452 Score = 115 bits (289), Expect = 5e-25, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 10/114 (8%) Query: 3 ISDTKLRTIYGKPYSG-----PQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGR 57 +SD K+R + KP P + +D GL + + G + YR+ GK + LG Sbjct: 2 LSDAKIRKL--KPTDKCTPSRPDKYSDQQGLQLLVRSSGTRTWVSAYRFDGKQQKTTLGT 59 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYFEEKV---ENSMTVAQCLDYWFDNY 108 YP + L +AR AD++ L +G +P+ + E + T W + Sbjct: 60 YPQMGLAEARVANADIKALVANGINPKNKKRQDKLANEQAKTFNDYAVEWLEER 113 >UniRef50_C8QZM9 Integrase family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZM9_9DELT Length = 409 Score = 115 bits (289), Expect = 5e-25, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M S+ K+R + +P S + +A+G SVRI P G + + Y + GK + LG YP+ Sbjct: 1 MKFSEAKIRNL--RPQSKKYYLREANGFSVRIMPSGAKTWLFIYTFDGKRKEMNLGHYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWFDNYVSTTLR 114 ++L+ AR+ L+ G DP EK E + ++ +D + + + R Sbjct: 59 VTLEAARRKYRAAFDLFEQGNDPVAMHLEKKEERRRTPFLSDLVDEYINKHAMRFKR 115 >UniRef50_B3GXJ8 Prophage CP4-57 integrase n=4 Tax=Pasteurellaceae RepID=B3GXJ8_ACTP7 Length = 406 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 9/116 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 +++T++ KP ++D GL +R+ P V + + Y + L +G YP Sbjct: 7 PLNNTEVEKAKIKPAE--YSLSDGYGLYLRVKPSKVKTWIFNYQEPITKRRTNLTIGDYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNYVS 110 ++S+ +AR I + R L G DP+T ++ +N T + W + Sbjct: 65 AISIAEARTIREEYRALLAKGIDPKTNKEEQERQQAEQNDNTFLKLAQLWKEKRSK 120 >UniRef50_A7H0X5 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter curvus 525.92 RepID=A7H0X5_CAMC5 Length = 396 Score = 114 bits (287), Expect = 6e-25, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 7/106 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPS 60 ++D+K++ + KP +++D D L +++ P G F Y + R G+ R+ LG+YP+ Sbjct: 4 LNDSKIKAL--KPKEKRYKISDGDNLYIQVMPSGTKTFIYEFKSRSSGRYKRISLGQYPA 61 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD 106 +SL AR+ + +K +G +P + E + + D WF Sbjct: 62 ISLLMAREKRLEFQKALANGDEPMS---EAKQAMTSFEAVFDEWFK 104 >UniRef50_UPI0001BCF971 integrase n=1 Tax=Mannheimia haemolytica serotype A2 str. OVINE RepID=UPI0001BCF971 Length = 188 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 11/112 (9%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY----RWHGKPNRLGLGR 57 ++ T++ KP +AD GL + + P G +++ Y K + +G Sbjct: 7 PLNSTQIDK--AKPKEKEYTLADGKGLYLLVKPNGTKLWRFNYYKPYTNPKKQALISIGS 64 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYW 104 YP +SL+ ARQ + L DP+ + E+ T A + W Sbjct: 65 YPDVSLQQARQTKDEYNALLAQNIDPQAHRIETTITEQNRLVNTFAYVAEQW 116 >UniRef50_B1JMJ4 Integrase family protein n=2 Tax=Enterobacteriaceae RepID=B1JMJ4_YERPY Length = 407 Score = 114 bits (287), Expect = 8e-25, Method: Composition-based stats. Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 6/117 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG---KPNRLGLGRY 58 +SD KL++++ + AD GLS ++S +G I + + YR G K RL GRY Sbjct: 6 KLSDKKLKSLHCINSDSVKMFADGAGLSAKVSAQGSISWVFTYRLGGRESKLERLVFGRY 65 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWFDNYVSTT 112 P ++LK AR R G DPR E V ++ TV L YW DNY T Sbjct: 66 PDMTLKAARDRRDQCRTWLAGGCDPRRQLLEDVTQTLKPVTVKDALLYWVDNYAQTN 122 >UniRef50_A5G0X3 Putative uncharacterized protein n=2 Tax=Acidiphilium cryptum JF-5 RepID=A5G0X3_ACICJ Length = 268 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 6/114 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D +R + P ++ D+ GL + ++P G +++RY+ GK L +G Y + Sbjct: 2 LTDIAIRK--AQIRDKPYKMFDSYGLYLLVTPAGGKLWRFRYKIGGKDKLLSIGPYSEVM 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFE----EKVENSMTVAQCLDYWFDNYVSTT 112 L AR + R +G DP + + + + W S Sbjct: 60 LSAARDARDEARAGLRAGRDPSLVRKQLRAQAANDDRKFEKVACDWHTLNKSRW 113 >UniRef50_B5WB94 Integrase n=1 Tax=Burkholderia sp. H160 RepID=B5WB94_9BURK Length = 295 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++ L+ KP S P ++ D D + +R+S G +++ YR GK LGR+P+ Sbjct: 1 MRLTYPLLQN--AKPRSKPYKLRDRDSMYLRVSVSGSKVWKFDYRLDGKDCSYTLGRFPN 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVSTT 112 +S+ DARQ+ KL SG P+ Y ++ + + T+ + W ++ Sbjct: 59 VSIADARQLRNAAAKLVASGIHPKAYEKQLQQQTVAHQKNTLWPVCEEWLEDNRGKW 115 >UniRef50_Q6AR70 Probable prophage integrase n=1 Tax=Desulfotalea psychrophila RepID=Q6AR70_DESPS Length = 399 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 12/117 (10%) Query: 8 LRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDAR 67 L+ + + P ++D GLS ++ GV ++ YRYR K LGRYP LSL+ AR Sbjct: 4 LKALQVRNAKDPCRLSDGLGLSFEVTKSGVKRWLYRYRLDDKQQMCVLGRYPELSLEQAR 63 Query: 68 QITADLRKLYFSGTDPRTYFEEKVEN------------SMTVAQCLDYWFDNYVSTT 112 +I + R L G +P K + S + W +N + Sbjct: 64 KIHREARALVREGCNPARERRRKKQEVISKEKAERDDRSKSFEYIALEWIENNKESW 120 >UniRef50_B7I7W7 Integrase n=4 Tax=Pseudomonadales RepID=B7I7W7_ACIB5 Length = 427 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 8/120 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR-WHGKPNRLGLGRYPS 60 +SDT L + P S D +GL R+ P G + +RY+ GK + LG+G YP Sbjct: 28 PLSDTVLANLE--PESKEYRELDGEGLYFRVKPDGKKAWLFRYKKADGKWSWLGIGTYPE 85 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTTLRE 115 LS AR+ ++ K G +P +E+ +N+ T W D +T +++ Sbjct: 86 LSGAGARKKAREIIKDISQGDNPIITKQERKRQELEQNNATFEVLAREWLDTKANTWVKD 145 >UniRef50_C6RGV6 Phage integrase n=3 Tax=Campylobacter RepID=C6RGV6_9PROT Length = 407 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 9/120 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPS 60 + DT++R K + D GL++ I+ KGV + + Y GK G G YP Sbjct: 20 LKDTQIRKAIKK--EKDYSLTDGGGLAILITSKGVKGWVFYYIDPVSGKKCSAGFGLYPD 77 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVSTTLRE 115 ++L AR++ A+ + L G P+ + ++ E T ++ + W + L + Sbjct: 78 ITLARARELRAEYKSLISQGISPKEHKKQAREQRQSDHKQTFSKVFNEWLELEKMRVLPK 137 >UniRef50_A1W8P6 Phage integrase family protein n=4 Tax=Comamonadaceae RepID=A1W8P6_ACISJ Length = 413 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 5/115 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D + + P D+ GL + +SP G ++ ++ + GK R+ LG YP+ S Sbjct: 2 LTDKQCKNAICPPDKKRARFTDSLGLYLEVSPSGSKRWFWKTYFDGKEGRMALGSYPTQS 61 Query: 63 LKDARQITADLRKLYFSGTDPRTYFE-EKVENSM----TVAQCLDYWFDNYVSTT 112 L DAR+ + G DP + EK++ S T W V Sbjct: 62 LADARKARDIAKLKKADGVDPVQERKLEKLKGSRSGGDTFQAIALEWHGRQVDQW 116 >UniRef50_A5F3U5 Site-specific recombinase, phage integrase family n=5 Tax=Vibrio RepID=A5F3U5_VIBC3 Length = 411 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 3/114 (2%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 + D L+ + K + + D DGL R+S +G +++Q+RY+ +G R+ LG YP L Sbjct: 3 KLYDKHLKAVLNKSHLKVFTLTDGDGLGARVSLQGNVRWQFRYKINGASKRVDLGDYPDL 62 Query: 62 SLKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWFDNYVSTT 112 SL AR+ R+ G DP+ ++ ++V L+YW Y + Sbjct: 63 SLLKAREEAQKCREWLAEGHDPKLQRSVIRQETLKPVSVQDALEYWLVEYAESN 116 >UniRef50_A1ATP4 Phage integrase family protein n=2 Tax=Desulfuromonadales RepID=A1ATP4_PELPD Length = 449 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 5/115 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +DT +R + KP ++ +G ++R+ P G + Y Y + GK ++ LG YP ++ Sbjct: 14 FTDTMIRKL--KPTESDYTRSEGNGFTIRVMPSGSKTWLYLYAFDGKRRKMNLGSYPDVT 71 Query: 63 LKDARQITADLRKLYFSGTDPR---TYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 L+ AR D ++ + DP E+ + TVA + + + + R Sbjct: 72 LETARGRFEDAKRKVKNNIDPMAEAEEQAEERRKAPTVADLVHDYIERHAKRFKR 126 >UniRef50_Q7MDZ9 Phage integrase n=2 Tax=Vibrio RepID=Q7MDZ9_VIBVY Length = 422 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 2/111 (1%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D LR GKPYSG E+ +GL VRISPKG I + YR + GKP ++ +G YP Sbjct: 1 MKLTDAWLRAHAGKPYSGKAEITYKNGLGVRISPKGKITWIYRALFKGKPIKMKIGEYPL 60 Query: 61 LSLKDARQITADLRKLYFSGTDP--RTYFEEKVENSMTVAQCLDYWFDNYV 109 + +K+A + +L G DP ++ +TV+Q ++++ +N + Sbjct: 61 MKIKEATEERDRFFELIQQGVDPRNKSILILNSNAPVTVSQVVEHYIENQL 111 >UniRef50_B8GNQ7 Phage integrase family protein n=6 Tax=Proteobacteria RepID=B8GNQ7_THISH Length = 422 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 6/111 (5%) Query: 1 MAISDTKLRTIYGKPYSG-PQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 MA++ R + P P + D L + ++P G ++YRYR GKP +G+YP Sbjct: 1 MAMNLLSARKVETIPSQKEPYWLKDGGSLFLYVTPSGSKLWRYRYRLGGKPAIYAIGKYP 60 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWF 105 +SL+ AR R+L G P + +N T W Sbjct: 61 QVSLEAARTERDRARELVKKGVHPVVEKRVNISTQLEKNENTFEPVARRWM 111 >UniRef50_B4T1L5 Phage integrase family protein n=12 Tax=Enterobacteriaceae RepID=B4T1L5_SALNS Length = 409 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 3/108 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MAISD+ L++ G+ +E AD DGL VRIS KG + F YR+R+ GK +++ +G YP Sbjct: 1 MAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGNYPE 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWF 105 LK AR+ + G +PR + K+ + T + W Sbjct: 61 FGLKAAREEVTKWAAILARGENPRIRQSLDKAKINSQYTFEELFREWH 108 >UniRef50_B5EWV2 Integrase n=2 Tax=Gammaproteobacteria RepID=B5EWV2_SALA4 Length = 102 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 2/94 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT +R I KP ++ D+ GL + I P G + +YR GK +L G YP Sbjct: 1 MALTDTAIRKI--KPTEKSFKITDSAGLYLLIKPNGSKLWYMKYRVDGKEKKLAFGPYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS 94 +SL ARQ+ R G DP + + Sbjct: 59 VSLFKARQLRDAARARVREGADPAADKKIAQQKK 92 >UniRef50_C8Q072 Phage integrase family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q072_9GAMM Length = 402 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 11/123 (8%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 ++ T++ KP P + D +GL + ++ G + +Y + K + + LGRYP Sbjct: 7 PLTTTEIEK--AKPQDKPYRLYDGEGLLLNVASSGTKTWYLQYSKPFTKKKDMVNLGRYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWF--DNYVSTT 112 +++L DAR+ ++L DP+T+FEE+ E+ + W Y T Sbjct: 65 TVNLADARKQKNYCQELLSKDIDPKTHFEEEARRKEYEHRTDFKSVFEEWLPTKKYAPKT 124 Query: 113 LRE 115 + + Sbjct: 125 VEK 127 >UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EVM1_ECOLX Length = 396 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 7/111 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS-- 60 ++DT+LR + KP +V D DGL V ++P G I F+Y Y +G+ + GRY Sbjct: 2 LTDTRLRHL--KPKEKLYKVNDRDGLYVAVTPAGTISFRYNYSINGRQETVTFGRYGVGG 59 Query: 61 LSLKDARQITADLRKLYFSGTDP---RTYFEEKVENSMTVAQCLDYWFDNY 108 ++L +AR+ + +K+ SG P + + +++++ T + W Y Sbjct: 60 ITLAEARERLNEAKKMVASGRSPAREKARDKARIKDAETFGAWAEKWLRGY 110 >UniRef50_Q6LRH5 Putative uncharacterized protein n=3 Tax=Vibrionaceae RepID=Q6LRH5_PHOPR Length = 391 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 43/115 (37%), Positives = 72/115 (62%), Gaps = 2/115 (1%) Query: 1 MAISDTKLRTIYG-KPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 M++ D +LR I K Y GP ++ D DGL RI+P+ +I FQYR R++GK R+ +G+YP Sbjct: 1 MSLLDRRLRIISKLKTYDGPAQLNDGDGLIARITPRAIITFQYRCRFNGKQLRIHIGKYP 60 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 + SLK+AR+ + +L SG +P+ + ++ +T+ C++YW +YV + Sbjct: 61 ATSLKEARRKHKIMMELRESGRNPKIANTGE-QDFVTLDDCVNYWLKHYVPNLKK 114 >UniRef50_B5BIF0 Integrase n=7 Tax=Salmonella enterica subsp. enterica RepID=B5BIF0_SALPK Length = 133 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 3/100 (3%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DTKLR GK + ++DA GL+VR+S G I F YRYRW+G +L +G YP++S Sbjct: 16 LADTKLRKAPGKKRDQIKVISDAHGLNVRLSTSGSITFFYRYRWNGNAAQLTIGDYPTIS 75 Query: 63 LKDARQITADLRKLYFSGTDPRTY---FEEKVENSMTVAQ 99 L AR+ R G DPR ++K ++TV + Sbjct: 76 LSHARERRQYFRSWLTEGLDPRRQMVLEKKKKTEALTVKE 115 >UniRef50_P76542 Putative prophage CPZ-55 integrase n=6 Tax=Enterobacteriaceae RepID=INTZ_ECOLI Length = 402 Score = 111 bits (279), Expect = 5e-24, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 9/118 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADA--DGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 ++ + +P P ++ D+ GL + + P G +++RY + + +G YP Sbjct: 5 PLTAKAIDA--AQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAIGVYP 62 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTY-FEEKVENSMT----VAQCLDYWFDNYVSTT 112 ++LK+AR+ + R L +G +P +EK +++ + + WF V Sbjct: 63 LITLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGW 120 >UniRef50_A5EXV7 Integrase A2 n=6 Tax=Cardiobacteriaceae RepID=A5EXV7_DICNV Length = 401 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D ++T KP G + D DGLS++I+ +G + +RY +G+ + LGRYP+ Sbjct: 10 MRLTDKIIQTAK-KPSRGYLRLTDGDGLSLKITDRGSYFWNFRYYINGRERNMSLGRYPA 68 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE--------NSMTVAQCLDYWFDNYVSTT 112 +S++ AR +LR G DP ++K T W+ Sbjct: 69 MSIEAARGEALELRYHLRQGLDPLAERKKKQAAYLAEEKTQKETFEFVAREWYQLKRPEW 128 Query: 113 LRE 115 E Sbjct: 129 KNE 131 >UniRef50_D1D4Y4 Site-specific recombinase n=19 Tax=Neisseria RepID=D1D4Y4_NEIGO Length = 406 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 5/109 (4%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +S +++ KP +++D GL++ + P G ++ + G+ + LGRYP Sbjct: 15 PLSANQVKN--AKPRDKLYKLSDGGGLALWVYPTGRRSWKLSFMQDGRQQTISLGRYPDF 72 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVS 110 SL +AR+ ++R+ G + +KV + WF + Sbjct: 73 SLAEAREWREEVRRKRAHGEN---VVNKKVRADFAFEKVARDWFVRWSK 118 >UniRef50_Q1QLT5 Phage integrase n=2 Tax=Alphaproteobacteria RepID=Q1QLT5_NITHX Length = 416 Score = 111 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 7/116 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DT +R KP P ++AD+ GL + +S G +++RYR+ K L +G YP +S Sbjct: 7 LTDTAIRK--AKPGDKPFKMADSGGLHLYVSTAGGKLWRFRYRYADKEKLLTIGPYPDIS 64 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTTL 113 L DAR + G DP + + + T W+D + Sbjct: 65 LVDARAARDAAKASLRDGRDPGVIKKLRKLANVTSTANTFEAIAREWYDLNKGQWV 120 >UniRef50_A6VNS1 Phage integrase family protein n=7 Tax=Pasteurellaceae RepID=A6VNS1_ACTSZ Length = 427 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 9/110 (8%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPS 60 +S ++ KP ++D GL + I P G + + Y + K +G+YPS Sbjct: 8 LSAAQINA--AKPKDKIYYLSDGLGLRLAIKPNGTKTWLFNYTKPYIKKRTDKTIGQYPS 65 Query: 61 LSLKDARQITADLRKLYFSGTDP--RTYFEEKVEN---SMTVAQCLDYWF 105 +SL DAR + R+L DP +EK E S T + + W Sbjct: 66 VSLADARAKAHEFRELLAKNIDPHQNEIEKEKQERLPMSNTFSHVANEWL 115 >UniRef50_D0J426 Phage integrase n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J426_COMTE Length = 416 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 5/115 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D + R P + + +DA GL + +SP G ++ ++YR GK RL LGRYP +S Sbjct: 2 LTDAQCRNAVCSPGAKRERFSDAGGLYLEVSPAGSRRWFWKYRKDGKEGRLALGRYPEVS 61 Query: 63 LKDARQITADLRKLYFSGTDPRTYFE-EKVEN----SMTVAQCLDYWFDNYVSTT 112 L AR+ R G DP + EK+ N + T W++ V Sbjct: 62 LTAARKARDAARLQKSEGIDPAKARKLEKLVNPTGVADTFKAVALEWYEKQVPRW 116 >UniRef50_A1ANR7 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ANR7_PELPD Length = 453 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 20/132 (15%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +DT +R + KP +V + DG VR+ P G+ F + Y GK ++ LG YP+ Sbjct: 1 MKFTDTGIRNL--KPKEKMYQVREGDGFGVRVLPSGLRIFVFIYTIAGKRRQMNLGDYPA 58 Query: 61 LSLKDARQITADLRKLYF-SGTDPRTY-----------------FEEKVENSMTVAQCLD 102 +SL +AR+ AD RK+ TDP+ + E++ + TV Q + Sbjct: 59 VSLSEARERAADARKVLSRERTDPQEHGFSWHYSPERERREMAAKEKEELENPTVKQLIT 118 Query: 103 YWFDNYVSTTLR 114 + + Y + Sbjct: 119 RYIERYAMKNKK 130 >UniRef50_C6XEE3 Integrase family protein n=2 Tax=Proteobacteria RepID=C6XEE3_METSD Length = 406 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 13/124 (10%) Query: 1 MA--ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH-----GKPNRL 53 MA ++D R + + +++D GL + + G +++RY H K L Sbjct: 1 MAKNLTDLACRKATCEGKT-LSKLSDGGGLYLWVYANGAKYWRFRYFIHVEGGKKKEMSL 59 Query: 54 GLGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWFDNY 108 LG YP +SL DAR + L +G DP T + K E T A+ W+ Sbjct: 60 SLGVYPEVSLNDARVEARKYQGLVDNGIDPATAKKAKLLQTKAEAGDTFAEIAREWYRKM 119 Query: 109 VSTT 112 + T Sbjct: 120 MPTW 123 >UniRef50_Q1QA94 Phage integrase n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QA94_PSYCK Length = 413 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 7/116 (6%) Query: 1 MAISDTKLRTIYGKPYS----GPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLG 56 M ++ T + + S P + +D +GL + + GV + YRW GK L +G Sbjct: 1 MPLTHTVINKLQPSSTSIDTKRPDKHSDGNGLQLWVRYTGVKSWISAYRWQGKQQTLTIG 60 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENS---MTVAQCLDYWFDNYV 109 YP +SL++ARQ ++++L G +P+ + +E+ + W+ Sbjct: 61 TYPVMSLQNARQRNIEIKRLIADGVNPKDHKKEQQASQDGLNIFDNIAQSWYAERK 116 >UniRef50_A0YFV5 Integrase, phage related protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFV5_9GAMM Length = 325 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 5/112 (4%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +DT +R++ KP + E+++ GL +R+S G + Y YR + + RL +GRYP++ Sbjct: 5 PFTDTYIRSL--KPKAERYEISEPGGLRLRVSSSGKKSWVYVYRQNKRLRRLTIGRYPNI 62 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWFDNYVS 110 SL AR A R G DP + K + + TV Q + + + + Sbjct: 63 SLSAARVEIAKARLTREKGIDPAIEAQLKTQKRLHAPTVEQLISLYIEQHAK 114 >UniRef50_C6DZF1 Integrase family protein n=1 Tax=Geobacter sp. M21 RepID=C6DZF1_GEOSM Length = 443 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 9/120 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 + +DT +R + KP ++ +G +VR+ P GV + Y Y + GK + LG YP Sbjct: 7 IMFTDTMIRKL--KPGEVKYIRSEGNGFTVRVMPSGVKTWLYLYSFEGKRREMNLGGYPH 64 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE-------NSMTVAQCLDYWFDNYVSTTL 113 +SL+ AR+ RK + DP + E + +T + + + V L Sbjct: 65 VSLETARERFEAARKKVKNNIDPMAENPKVAEVVEVERRHDLTFDELAQEYIADNVEDQL 124 >UniRef50_B4WZP4 Site-specific recombinase, phage integrase family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WZP4_9GAMM Length = 400 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 5/118 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++ +R +P ++ D GL + + G ++ YR+ G+ + LG P Sbjct: 1 MALTSADVRN--AEPLQKDYKLHDDKGLYLLVETDGNRTWKLSYRFDGRSKVITLGPCPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWFDNYVSTTLRE 115 ++L ARQ+ + R+L G DP + ++ S T W + + E Sbjct: 59 VTLSFARQLRDEARELIADGIDPISRCVKREVFSPSVETFEAVARDWLERVYRLEVSE 116 >UniRef50_A7JSX8 Bacteriophage integrase n=3 Tax=Pasteurellaceae RepID=A7JSX8_PASHA Length = 413 Score = 109 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 7/119 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISP--KGVIQFQYRYRW--HGKPNRLGLGR 57 A++ T++ K ++D DGL++R+ P KG + + Y L +GR Sbjct: 7 ALNKTQIEN--AKSKDKEYILSDGDGLNLRVKPLPKGSKIWIFNYTNPQTKNRTNLTIGR 64 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYFEE-KVENSMTVAQCLDYWFDNYVSTTLRE 115 YP ++L +AR I R L G DP+ + + E V ++Y + +E Sbjct: 65 YPLITLAEARTICDGYRSLIEKGIDPQEEKKRLQQEAENRVNDTFRNVAESYFNGIYKE 123 >UniRef50_Q1NGR6 Putative phage integrase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGR6_9SPHN Length = 428 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 6/107 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DT +++I P + P + AD GL++ + P G ++ + YR+H K + G YP +S Sbjct: 2 LTDTLIQSII--PAARPIKKADGGGLNICVLPNGRREWCFSYRFHHKQKSITGGDYPLMS 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFE----EKVENSMTVAQCLDYWF 105 + AR +++ +G DP E T Q W Sbjct: 60 IDRARVWREEMKAALSAGKDPANIKRQLKYEDQAERTTFRQLAYEWM 106 >UniRef50_C6ALW6 Prophage integrase n=2 Tax=Pasteurellaceae RepID=C6ALW6_AGGAN Length = 413 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 55/124 (44%), Gaps = 12/124 (9%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPS 60 +++T++ + P + D GL + I P G ++++RY + +G +PS Sbjct: 8 LTNTQVERVKYTPNGKNV-LNDGKGLFLEIYPTGAKKWRFRYERPITKARTKFNIGDHPS 66 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNY----VST 111 ++L AR + L G DP+ + ++K + T + + W +N + Sbjct: 67 ITLAQARVKRDEYNALLAQGIDPQEHAKQKHQALQFQLENTFLKWAERWKENKEKKVKAD 126 Query: 112 TLRE 115 TLR+ Sbjct: 127 TLRK 130 >UniRef50_C6N3S0 Putative phage integrase family protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N3S0_9GAMM Length = 397 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 6/113 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGV---IQFQYRYRWHGKPNRLGLGRYP 59 +SD+ +R++ K D DGL + + P F +R++W KP + +G Y Sbjct: 2 LSDSLIRSL--KLGDKK-RHTDRDGLVLELRPSKKQLKKIFIFRFQWDKKPQTITIGDYR 58 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTT 112 S+ L AR I R + SG DPR+ E + +T D WF Y T Sbjct: 59 SVGLGAARDIALAYRNMVNSGIDPRSKNVEADQEKITFEVVADQWFQKYKGTW 111 >UniRef50_C6RPH9 Site-specific recombinase, phage integrase family n=2 Tax=Acinetobacter radioresistens RepID=C6RPH9_ACIRA Length = 159 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 9/112 (8%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++D + P ++D +GLS+R+ P G + RY +G+ LG YP Sbjct: 6 MSLTDVLCKKAL--PQEKQYRLSDINGLSLRVDPNGKKYWSIRYTENGQRKSKALGIYPE 63 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTT 112 LSLK AR+I DLR + T E + + + WF+N T Sbjct: 64 LSLKRAREIAFDLRYKLKNTT-------EVEQEQPYFKEVAEDWFNNQKETW 108 >UniRef50_Q4K6S7 Site-specific recombinase, phage integrase family n=4 Tax=Proteobacteria RepID=Q4K6S7_PSEF5 Length = 413 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 8/118 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY-RWHGKPNRLGLGRYPS 60 ++DT L + P + D +GL R+ P G +Q RY R G +GLG YP Sbjct: 10 PLADTTLTGLE--PEAKEYRELDGNGLYFRVKPDGGKSWQLRYKRPAGNWAWMGLGGYPE 67 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTTL 113 +S AR+ A+LRK SG DP + T D W L Sbjct: 68 VSGALAREKAAELRKTISSGIDPLEQKRSAKAAIDAAKTRTFRAAADAWLKAKEEKGL 125 >UniRef50_D0SUB2 Predicted protein n=2 Tax=Acinetobacter RepID=D0SUB2_ACILW Length = 396 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 15/115 (13%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT+ R +P ++D GLS+ I+ KG + R HG+ LG YP Sbjct: 17 MPLTDTECRK--AQPKDKQYRLSDLHGLSLIITTKGQKYWNVRVTVHGERKSESLGPYPD 74 Query: 61 LSLKDARQITADLRKLYFSGT---DPRTYFEEKVENSMTVAQCLDYWFDNYVSTT 112 LSLK AR++ +L+ Y D + YFEE + WF+N T Sbjct: 75 LSLKKARELAYELKHRYSRSVLHEDLKPYFEE----------VAEDWFNNQKETW 119 >UniRef50_B8F737 Phage integrase family site specific recombinase n=4 Tax=Pasteurellaceae RepID=B8F737_HAEPS Length = 416 Score = 107 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 9/111 (8%) Query: 6 TKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPSLSL 63 T++R KP ++D GL + + G F + Y + +G YP +SL Sbjct: 8 TQIRQ--AKPKDKDYPLSDGGGLRLIVRKSGAKVFVFNYYKPYTKTRTNFTIGEYPEISL 65 Query: 64 KDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYV 109 AR+ A R L DP E + +T + WF++ Sbjct: 66 IQARKEHAKARALLAQNIDPVRQRELDKQEQANRLELTFEKMAVKWFEDRK 116 >UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE42_ECOK1 Length = 418 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 7/110 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP--S 60 ++DTKL+ + KP +V+D DGL V + G + F+Y YR +G+ L +G+Y Sbjct: 2 LTDTKLKNL--KPQDKLYKVSDRDGLYVAVLTSGTVSFRYDYRINGRRETLVIGQYGRDG 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWFDN 107 +SL +AR+ +KL +G P +K+ + T A D + + Sbjct: 60 ISLAEAREELIAAKKLLKAGQSPAAAKRDGIKKIRGAETFAVHTDSYMKH 109 >UniRef50_Q8EJS4 Site-specific recombinase, phage integrase family n=2 Tax=Gammaproteobacteria RepID=Q8EJS4_SHEON Length = 429 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 11/119 (9%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPK-----GVIQFQYRYRWHGK---PNRLG 54 +++T L ++ KP P ++D+ GL+ R +P + + +RYR G+ + Sbjct: 7 MTNTALVSLTNKPLDKPTTLSDSGGLAARATPAKDGKGNNVLWIFRYRMGGRETPQRTIV 66 Query: 55 LGRYPSLSLKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWFDNYVS 110 G+YP L L AR+ + G DP+T E K +TVA+ LD W Y + Sbjct: 67 FGKYPDLKLAGAREKRERCKVWIADGKDPKTQLELELSKAVKPLTVAEVLDNWISEYAN 125 >UniRef50_B1Y3M2 Integrase family protein n=4 Tax=Proteobacteria RepID=B1Y3M2_LEPCP Length = 433 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 19/129 (14%) Query: 3 ISDTKLRTIYGKP--YSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 + D +R + + + D DGL + + P G +++RYR+ GK L LG YP Sbjct: 7 LDDKSIRAAIKRAMKAQAGERLTDGDGLRLDVQPTGSAWWRWRYRFGGKEGMLSLGTYPD 66 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----------------TVAQCLDY 103 SL AR + R+ +G +P ++ T Sbjct: 67 TSLSAARGRRDEARERLAAGINPSEARKDDKAAQALKAEAARLAAAGLPGPGTFEHAARE 126 Query: 104 WFDNYVSTT 112 W + Sbjct: 127 WHARMAPSW 135 >UniRef50_C1TL52 Integrase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL52_9BACT Length = 378 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 11/109 (10%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+++ +++ P + D++GL + I+P G ++ R++ G+ + LGRYP Sbjct: 1 MALTNVEIK--RATPREKRYTMRDSEGLWLEITPAGKKTWKVRFKAQGREIKHTLGRYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYV 109 +SLK+AR ++R + K T + WF+ V Sbjct: 59 ISLKEARLKRDEIRLELVN---------HKSVPEGTFKALAEEWFERQV 98 >UniRef50_A7FP63 Site-specific recombinase, phage integrase family, truncation n=3 Tax=Enterobacteriaceae RepID=A7FP63_YERP3 Length = 90 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD ++R KP ++D GLS+ I P G +++RYR+ GK + LG Y Sbjct: 1 MPLSDRQIR--RAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDL 58 Query: 61 LSLKDARQITA 71 +SL +AR Sbjct: 59 VSLAEARCKRN 69 >UniRef50_B6B4D0 Integrase n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B4D0_9RHOB Length = 113 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++D++LR + KP Q++ D GL+ + P G + + YRW+GK + G YP Sbjct: 3 KLNDSQLRKL--KPTEKTQKIGDGLGLTFVLKPNGSRYWHFNYRWYGKQRTISFGTYPET 60 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFE 88 SLK AR + R+ DP + Sbjct: 61 SLKSARDQRTEAREFLAQKIDPSAERK 87 >UniRef50_Q0I4P6 Integrase n=14 Tax=Pasteurellaceae RepID=Q0I4P6_HAES1 Length = 418 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 11/115 (9%) Query: 3 ISDTKLRTIYGKPYSG----PQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLG 56 +++ K+ K ++ D +GL + + G +++ Y K + LG Sbjct: 8 LNNRKIDAAKPKADEQGNLTDNKLQDGNGLYLLVKATGSKLWRFNYYKPLTKKRTEMSLG 67 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFD 106 YP +SL AR++ R L DP + + + + T WF+ Sbjct: 68 AYPDVSLAQARELRNQYRSLLAQDIDPNEHRQNVKQAKLDEINNTYEAVAWAWFE 122 >UniRef50_D0SZI9 Integrase n=14 Tax=cellular organisms RepID=D0SZI9_ACILW Length = 401 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 10/114 (8%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG--KPNRLGLGRY 58 M++++ K+R K +AD DGLS+++ P G + YRY G K R+ LG Y Sbjct: 1 MSLTEIKVRQ--AKSKEKIYFLADDDGLSLKVEPNGRKSWSYRYSLAGTNKRPRMKLGEY 58 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTT 112 P +SLK+AR + + + + P K T + W + + + Sbjct: 59 PVMSLKEARSVRDEYKFNNYENK-PLHKKYIK-----TFQDICEEWLEFKIKNS 106 >UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria RepID=Q3SF40_THIDA Length = 440 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 6/113 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRW-HGKPNRLGLGRYP 59 MA+SD+KLRT+ KP +D GL + I P G ++ +YR GK + LG YP Sbjct: 1 MALSDSKLRTL--KPADRVFSESDGGGLYIEIMPTGKRRWGLKYRIPTGKQETIRLGDYP 58 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEK---VENSMTVAQCLDYWFDNYV 109 + SL DAR D + L G P + + + ++ N+ Sbjct: 59 AYSLADARTWRDDCKALAGRGLSPMALKRGDPIPEDAAPAAKELAQFFIRNWC 111 >UniRef50_C6RSU9 Phage integrase family protein n=3 Tax=Acinetobacter RepID=C6RSU9_ACIRA Length = 426 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 52/122 (42%), Gaps = 14/122 (11%) Query: 1 MAISDTKLRTIYGKPYS-------GPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPN 51 ++++D+K++ S ++D GL++ I G + +++ Y K N Sbjct: 6 ISLTDSKIKAFLRDIKSNNPNGLQKDIRLSDGAGLNLLIRKNGTVMWRFDYTRPVSKKRN 65 Query: 52 RLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFD 106 + +G YP++SL AR+ R L G DP+ +E+++ T + + Sbjct: 66 TMTVGNYPAMSLAKAREYRDQFRALLAEGKDPQVEKQGVEEKERLKQQATFKSVAELYKS 125 Query: 107 NY 108 Sbjct: 126 KQ 127 >UniRef50_A7JZW2 Site-specific recombinase, phage integrase family protein n=2 Tax=Vibrio sp. Ex25 RepID=A7JZW2_VIBSE Length = 471 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 9/109 (8%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYP 59 +++T+++ ++D L +RI G + + Y K ++GLG YP Sbjct: 28 KLTNTQIKNAAK--SDKEYSLSDGGNLYLRIRKNGSKNWLFIYTDFSTKKRKKMGLGSYP 85 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDY 103 +++L + R++ +LRK G DP+ + E++ E+ +T + Sbjct: 86 NMTLDEVRKVAKELRKQMTKGIDPKLFREKQKLDRLVESQLTFKAIAEK 134 >UniRef50_A0Q3W3 Phage integrase n=8 Tax=Francisella RepID=A0Q3W3_FRATN Length = 413 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 5/109 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA + T + K + D +GL +++S G +Q+RY K LG+G YP+ Sbjct: 1 MAKTLTASKLQSLKATGKDYRLNDGNGLYIKVSKAGSKSWQFRY----KGKWLGIGSYPA 56 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEE-KVENSMTVAQCLDYWFDNY 108 +SLK AR ++ G DP+ E+ K +++ + F+ Sbjct: 57 ISLKQARDEAFKYNQMLAGGKDPKLEKEKGKYQDNNLFSIVSAKAFETK 105 >UniRef50_A3J962 Putative integrase prophage protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J962_9ALTE Length = 240 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 8/112 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +S +++ K +++AD GL++ I +G + RYR+ G L +G YP + Sbjct: 7 KLSANEVKN--AKGSGEIRKLADGGGLTLVIK-RGSKYWWLRYRFAGNEKTLSIGGYPQV 63 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNY 108 SL ARQ ++L DP + ++ T + W+ Sbjct: 64 SLAAARQARDSAKELLKQYIDPSAHRRQESTQRTSDGENTFRTLCEDWYQQK 115 >UniRef50_Q2T3P2 Integrase n=31 Tax=pseudomallei group RepID=Q2T3P2_BURTA Length = 409 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 13/125 (10%) Query: 1 MA---ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR-WHGKPNRLGLG 56 M + D + R+ KP ++D GL++ + P G+ +Q+RY G+ + +G Sbjct: 1 MPESLLRDLQCRS--AKPRERVYRLSDGGGLALLVKPNGLKYWQFRYMKPDGREGLIQIG 58 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKV-------ENSMTVAQCLDYWFDNYV 109 YP ++L+ AR + R G DP T +++ ++ QC + + Sbjct: 59 PYPRITLEAARAARNEHRVAVQGGDDPATLRKQEKARRKIDAARALNFKQCATAFIEARS 118 Query: 110 STTLR 114 + + Sbjct: 119 AEWVN 123 >UniRef50_D1AZM1 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZM1_SULD5 Length = 416 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 9/113 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG--KPNRLGLGRYPS 60 ++D +++ KP P +D +GL + I P G +++ Y K + G YP Sbjct: 9 LTDKEIKNF--KPEDKPYIKSDINGLRILIHPDGRKIWEFVYTSPTLYKKRKSTFGTYPK 66 Query: 61 LSLKDARQITADLRKLYFSGTDPR-TYFEEKVE----NSMTVAQCLDYWFDNY 108 +LK+AR L G DP EEK E + ++ WF + Sbjct: 67 TTLKEARDKRETYLNLIKQGIDPIDAQREEKAEVKLQKESDFSNVVNLWFQSQ 119 >UniRef50_P39347 Putative prophage P4 integrase n=97 Tax=Enterobacteriaceae RepID=INTB_ECOLI Length = 396 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Query: 28 LSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDP---R 84 + + + P G ++ +YR+ GK L LG YP ++L DAR + RKL +G DP + Sbjct: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 Query: 85 TYFEEKVENSMTVAQCLDYWF 105 + + + T + W Sbjct: 61 KNDKVEQSKARTFKEVAIEWH 81 >UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QCE7_9RHIZ Length = 418 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 7/121 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M + +L I P D GL +R+ P G + +RY KP LGLG S Sbjct: 1 MPKTTHRLNAISASNIKKPGLYPDGAGLYLRVKPSGARSWVFRYMHDRKPRYLGLGSAAS 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-------SMTVAQCLDYWFDNYVSTTL 113 +SL AR + D R+ G DP +MT +C + + + + Sbjct: 61 VSLATARSLAGDARRQLDLGQDPIEAKRAAERETAADKARAMTFKECAEAYMAAHEPSWK 120 Query: 114 R 114 Sbjct: 121 N 121 >UniRef50_A8EUF6 Putative phage integrase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EUF6_ARCB4 Length = 405 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 8/120 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++DT+++ +++D + L + + G F++ + + K + G YP + Sbjct: 7 PLTDTEIKKAKA--KEKDYKLSDGENLYLVVKSNGTKFFRFDFSYTKKRKSMSFGIYPDI 64 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD------NYVSTTLRE 115 SLK+AR++ ++ +P N T + W +V+ L E Sbjct: 65 SLKEARELREKAKEQLKQNINPIEAKSSNFGNISTFKYITEKWLKLMTSEWKHVTYELNE 124 >UniRef50_Q72AY5 Integrase, truncation n=1 Tax=Desulfovibrio vulgaris str. Hildenborough RepID=Q72AY5_DESVH Length = 106 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D ++ + +P++ +ADA GL + SP G +++RYR K N L G YP Sbjct: 1 MALTDIQVTAL--QPWTKAYRIADASGLCLEASPNGHKLWRFRYRLQAKANMLVRGVYPQ 58 Query: 61 LSLKDARQITADLRKLYFSGTD 82 +SLK AR + G + Sbjct: 59 VSLKQARLARDEAHLKLAQGVN 80 >UniRef50_A1TXN0 Phage integrase family protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXN0_MARAV Length = 396 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 3/90 (3%) Query: 25 ADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPR 84 GL++RIS +G + YR+R+ GK + + LGRYP+ SL +AR + D L G +P+ Sbjct: 6 GGGLAIRISIRGTKTWFYRFRFRGKQDAVSLGRYPTTSLLEARDVHGDACALLAKGINPK 65 Query: 85 TYFEEKV---ENSMTVAQCLDYWFDNYVST 111 F+E E + T + D W Y ST Sbjct: 66 KAFKESKKVAEQTWTGQELFDDWIRVYSST 95 >UniRef50_C7HXY0 Integrase family protein n=1 Tax=Thiomonas intermedia K12 RepID=C7HXY0_THIIN Length = 392 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 6/106 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++ + KP P ++ D GL + ++P G+ ++ Y +GK GRYP+ Sbjct: 1 MSLTVKAVDA--AKPQERPYKLTDGGGLYLFVAPTGLKSWRANYELNGKQRTRTYGRYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD 106 ++L AR+ + + + T + W Sbjct: 59 MTLAQAREAHTQAKSTPAE----AATVTPIAKVAPTFKAITEQWLK 100 >UniRef50_C0VMY9 Integrase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VMY9_9GAMM Length = 429 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 2 AISDTKLRTIYGK-PYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRY 58 ++ +++ + + Q D GL + I ++ YR K N L +G Y Sbjct: 7 KLTAKEVKNLSFDVSGAKKQRHPDGGGLYLLIDETEAKYWRMDYRRPVTQKYNTLAIGTY 66 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFD 106 P++SL+ AR + +K+ +G DP K T ++ W D Sbjct: 67 PTISLEQARSKRDEFKKMLANGIDPAEQRNNKKREQLQTLENTFSKFAAEWLD 119 >UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP99_HAHCH Length = 416 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 11/117 (9%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVI---QFQYRYR--WHGKPNRLGLG 56 +SDTK+R ++D +GLS+RI PK + +RYR KP +L LG Sbjct: 3 KLSDTKIRNAK---TETDTCLSDGNGLSLRIYPKRGKIARTWVFRYRRPATKKPAKLSLG 59 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKV---ENSMTVAQCLDYWFDNYVS 110 YP +SL+ ARQ +R+ F G DP+ +E+ N++T Q + W S Sbjct: 60 DYPVISLRAARQQAEIMRQQLFEGLDPQYVQKEQRAENANAITTQQLFESWLTLQKS 116 >UniRef50_Q0I233 Phage integrase n=5 Tax=Pasteurellaceae RepID=Q0I233_HAES1 Length = 434 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 6/92 (6%) Query: 20 QEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPSLSLKDARQITADLRKLY 77 + D +GL + + G +++ Y + K + +G+YP +SL AR+I + L Sbjct: 42 YPLRDGNGLFLSVEISGSKIWRFNYYKPYTKKRTEISIGKYPEISLLQARKIRDEYLALL 101 Query: 78 FSGTDPRTYFEEKVE----NSMTVAQCLDYWF 105 DP+T+ ++K T W+ Sbjct: 102 AQNIDPKTHRDQKQNTQALERNTFKYVCAKWY 133 >UniRef50_A4BQA0 Prophage CP4-like integrase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQA0_9GAMM Length = 291 Score = 101 bits (252), Expect = 9e-21, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 10/117 (8%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++ +++ K P ++ D DGL + ++P G ++ +YR +G+ L LG P + Sbjct: 2 LTVQEIKN--AKASDKPWKLYDRDGLYLFVTPTGGKLWRGKYRVNGREKTLSLGPCPKVG 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENS----MTVAQCLDYWFDNYVSTTLRE 115 L +AR+ D R+L DP + + + S T W R+ Sbjct: 60 LAEAREKWQDARRL----DDPSAVKQVEKQASDSTTPTFLAVAKEWRTRQTPGWTRK 112 >UniRef50_D1Y3S1 Site-specific recombinase, phage integrase family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3S1_9BACT Length = 433 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 9/114 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG-KPNRLGLGRYP 59 MA++ T + GK P + D GL +++ P G + YRYR G + ++ LG YP Sbjct: 1 MALNITAIERSTGK--DAPYLLNDGGGLYLKVCPNGRKVWLYRYRDEGERERKVTLGEYP 58 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTL 113 +L + AR+ R G P + +T Q W++ L Sbjct: 59 ALDMAAARERKEATRARILRGEAP------QDTALLTFEQVARRWYEKQKKRGL 106 >UniRef50_B9D1P3 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter rectus RM3267 RepID=B9D1P3_WOLRE Length = 395 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 6/113 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRY 58 + ++D ++R + KP + D GL + + P G F Y K RL LG + Sbjct: 6 IPLTDREIRGL--KPKDKIYKKCDGRGLYIFVDPSGRKYFALEYKSPADNKIKRLNLGDF 63 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVST 111 P SL AR+ L + G D E ++ + W + ++ Sbjct: 64 PEFSLAMAREERFKLEQKVRDGID--VKHESEINEQANFKKLAQRWLEIKAAS 114 >UniRef50_A4N808 DNA polymerase III subunit delta n=4 Tax=Haemophilus influenzae RepID=A4N808_HAEIN Length = 223 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 9/121 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRW--HGKPNRLGLGRYP 59 +D+ + I KP Q +D D L + + P G +++ Y K + G YP Sbjct: 8 KFTDSYIHGI--KPTDKEQLFSDRDNLYLLVKPTGAKIWRFIYTHPTTKKRIKKSFGNYP 65 Query: 60 SLSLKDARQITADLRKLYFSGTDPRT----YFEEKVENSMTVAQCLDYWFDNYVST-TLR 114 S+ L AR+ +L DP EEK + S+T + W D + L+ Sbjct: 66 SILLAFAREKARIWCRLLAQNIDPAEEECMQQEEKEKKSVTFKELAMLWRDKRLKKGELK 125 Query: 115 E 115 E Sbjct: 126 E 126 >UniRef50_C8PFJ4 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFJ4_9PROT Length = 383 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 14/114 (12%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++ T+L+ + KP P V D L ++I P G F Y Y+ K R+ +GR + Sbjct: 7 PLTATQLKNL--KPKDKPYFVGDGSNLLIKIMPSGAKFFIYEYKQGAKYKRVTIGRAGEM 64 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 SL +ARQ ++L+ K + +T + + W + ++ Sbjct: 65 SLAEARQRKSELKTRV------------KTSDKITFREVFEEWIKTKSKISPKQ 106 >UniRef50_Q3JXH9 Integrase or site-specific recombinase n=24 Tax=cellular organisms RepID=Q3JXH9_BURP1 Length = 414 Score = 99.8 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 6/111 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPN-RLGLGRYPS 60 ++DT+++ + KP + V+D GL + + G ++YRY HGK + +G YP+ Sbjct: 12 PLNDTRIKAL--KPKAARYTVSDGGGLVLEVMTSGSKFWRYRYSLHGKQQPVVTIGEYPA 69 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEE---KVENSMTVAQCLDYWFDNY 108 +SL AR+ ++ G P + V++ T+ + +YW + Sbjct: 70 VSLTAARERARRYAEIVAGGVSPVADARKDRGAVKSLDTIHEFAEYWIEQQ 120 >UniRef50_D1ZVQ9 Whole genome shotgun sequence assembly, contig_309 (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZVQ9_SORMA Length = 214 Score = 99.8 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 14/118 (11%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH----GKP--NRLGLG 56 ++D K++ KP ++ D+ L + ++P G ++ Y + GKP L G Sbjct: 35 LTDAKIKA--AKPRETAYKMVDSAQLFLHVTPAGGKHWRMNYTFGKNAAGKPAQKTLTFG 92 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 YP ++L +ARQ + L G DP E + W + LR Sbjct: 93 PYPGVTLVEARQKRDAAKALLRDGRDPAIVARRWFELRKAI------WSPVHADDVLR 144 >UniRef50_C8PUK8 Phage integrase family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PUK8_9GAMM Length = 446 Score = 99.8 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 9/113 (7%) Query: 5 DTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPSLS 62 D ++ K +A GL +RI P G +F++RY + GK + LG YP+ S Sbjct: 13 DKFIKAGVSK--DTSYPIAGFKGLELRIRPNGKAEFRHRYTHPYTGKRPYMTLGSYPAFS 70 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVS 110 L A+Q D L DP T+ E++ T W + + Sbjct: 71 LAQAKQAYNDNMALLAQTIDPLTHKEQENAKQAYALDNTFEAVAKDWLNEQTN 123 >UniRef50_C6V8W5 Integrase n=4 Tax=Enterobacteriaceae RepID=C6V8W5_ECOBD Length = 294 Score = 99.8 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Query: 28 LSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYF 87 + + + P ++ RYR GK L LG YP +SL +AR + RKL +G DP Sbjct: 1 MLMLVHPNSSRYWRLRYRILGKEKTLALGVYPEVSLSEARAKRDEARKLISAGIDPCEQK 60 Query: 88 EEKV---ENSMTVAQCLDYWF 105 K + ++ W Sbjct: 61 RAKKVVPDLQLSFEHIARRWH 81 >UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0X2_ACICJ Length = 410 Score = 99.4 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 6/118 (5%) Query: 1 MAISDTK-LRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 M + +K L + + + D GL +R+ G + +RY G+ + + LG Sbjct: 1 MPKTVSKRLNALAITNANREGNLHDGGGLYLRVRADGSKSWAFRYTMAGRKHWMSLGPLR 60 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTT 112 +SL +AR+ LR L G DP E+ + + T + + + + Sbjct: 61 DVSLSEAREQARQLRNLVRDGFDPLAQRRERQHLAAEQTARTFDAVAAAYVEAHRAEW 118 >UniRef50_Q0EWR9 Integrative genetic element Gsu32, integrase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWR9_9PROT Length = 391 Score = 99.4 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 7/115 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADAD--GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRY 58 M +D +++I +P EV + G +VR+S G F + Y+ +G+ RL G Y Sbjct: 1 MKFTDRSIKSI--RPTGKRFEVRETGRTGFAVRVSTTGTKTFVFIYKINGQKKRLSFGTY 58 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVE---NSMTVAQCLDYWFDNYVS 110 P++SL +A + + + G DP +K + N +T+ + + + + Y Sbjct: 59 PAMSLNEAHLLYEEAKLELEKGNDPALIKAKKSQLEKNEVTIPELIKLYINQYAK 113 >UniRef50_A4Y9I4 Phage integrase family protein n=3 Tax=Shewanella RepID=A4Y9I4_SHEPC Length = 432 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 7/108 (6%) Query: 3 ISDTKLRT-IYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRL--GLGRYP 59 ++D ++++ + K A DGL +R+ +GV ++ RY +GK + G YP Sbjct: 11 MNDKQIKSFLKSKELG---RKAVGDGLYIRVQTEGVAYWEVRYSVNGKRRSMVPNGGVYP 67 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-TVAQCLDYWFD 106 ++SL +A+ A ++ L G DP E + E ++ TV D W+ Sbjct: 68 AMSLVEAKAEAAKVKLLAKQGIDPLAERERQQEITIKTVNDLFDDWYQ 115 >UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KUI7_METC4 Length = 414 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 41/106 (38%), Gaps = 8/106 (7%) Query: 13 GKPY-SGPQEVADA--DGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQI 69 KP +EV DA GL + + P G + RYR GKP +L LG YP L L DAR+ Sbjct: 12 AKPDPGKRREVPDAALPGLYLVVQPAGGKSWAVRYRAAGKPRKLTLGPYPRLGLADAREA 71 Query: 70 TADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWFDNYVS 110 G DP + +M + + Y Sbjct: 72 ARTALHAVAEGRDPAGEKQAARVEVAAVQTMRFGAVAADYIERYAK 117 >UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas putida RepID=B0KFC6_PSEPG Length = 436 Score = 98.3 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 14/125 (11%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPK---G---VIQFQYRYRWHGKPNRLGL 55 +SD +R++ SG D GL +++ G ++ +YR GK N + Sbjct: 26 KLSDAFIRSLT---TSGKYADGDVPGLYLQVRASLKPGKSPSRHWRLKYRLRGKENVYVI 82 Query: 56 GRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNYVS 110 GRYP + LK+AR++ R + DP + K+E + T A + W + Sbjct: 83 GRYPDVGLKEARELARAARNSVANHIDPLKAKKAKIEAQWLNEARTFAYVAEEWMKFKSA 142 Query: 111 TTLRE 115 + + Sbjct: 143 DLVSK 147 >UniRef50_A1AQ50 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQ50_PELPD Length = 427 Score = 98.3 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 7/117 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGL--GRYPS 60 +D + ++ KP + G S+R+ P G + + Y + G+ + L G YP Sbjct: 7 FTDKFIMSL--KPADKEYWKREGQGFSIRVYPSGEKAWYFIYTFDGRKKYMRLKDGGYPD 64 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEK---VENSMTVAQCLDYWFDNYVSTTLR 114 +SL DAR+ + +G DP E+ +++ V + +D + Y R Sbjct: 65 VSLADAREAFDIAKVKLKNGIDPLAELEQARLDRKHTPFVKEFVDEFIRIYCKENNR 121 >UniRef50_C3MAV8 DNA integration/recombination/invertion protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MAV8_RHISN Length = 429 Score = 97.9 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 4/114 (3%) Query: 2 AISDTKLRTIYGKPYSGPQEVADA--DGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 ++ + I K S +E+ D GL + + GV + RYR GKP ++ LG +P Sbjct: 6 PLTVKSIEAI--KAGSSRREIPDGALQGLYLIVQTTGVKSWAVRYRHAGKPRKMTLGGFP 63 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTL 113 ++SL DAR+ ++ G DP T E+ + D +V+ + Sbjct: 64 AISLSDAREEARKALRMVSEGRDPATEKAEQEPKRPAHMDLMPALLDEFVTRHV 117 >UniRef50_Q2N8A1 Symbiosis island integrase n=12 Tax=Bacteria RepID=Q2N8A1_ERYLH Length = 409 Score = 97.5 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 7/119 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D +R K +++D+ GL + + G ++ +YR G+ +L +GRYP Sbjct: 1 MVLTDVGIRK--AKAGPKAYKLSDSSGLFLLVERTGGKLWRMKYRIDGREKKLAIGRYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVSTTLR 114 + L +AR+ R+ G DP + + + A + + R Sbjct: 59 IGLAEARRRRDAAREQLAQGKDPSREKQRQKARAKLGAENNFASLAAEFCEKRKHDGSR 117 >UniRef50_B8ERI0 Integrase family protein n=1 Tax=Methylocella silvestris BL2 RepID=B8ERI0_METSB Length = 400 Score = 97.1 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 4/97 (4%) Query: 1 MAISDTKLRTIYG-KPYSGPQEVADAD--GLSVRISPKGVIQFQYRYRWHGKPNRLGLGR 57 MA + T ++ I KP + EV D GL + P G + YR+ + GKP +L +G Sbjct: 1 MAKNLT-IKGIAALKPQAKRCEVPDGHTRGLYFVVQPSGAKSWAYRFSFEGKPKKLTIGS 59 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENS 94 YP++ L AR I +G +P + + E + Sbjct: 60 YPAIDLSRARSIALASATKVANGRNPAAEKKVEREKA 96 >UniRef50_C9M6R5 Site-specific recombinase, phage integrase family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6R5_9BACT Length = 393 Score = 97.1 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DT ++ + K + D +GL + + P G + RY K ++L +G YP + Sbjct: 2 LTDTAIKRL--KLGETRYLILDGNGLYLLVCPNGRKVWTVRYWIDKKLHQLTIGDYPMMG 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 L +AR +++ D R + +T + W++ L + Sbjct: 60 LAEARAERDEIKN------DARYEKKVAAPMGLTFGEFAREWYEKRKRPKLSK 106 >UniRef50_A2SG96 Integrase or site-specific recombinase n=19 Tax=Proteobacteria RepID=A2SG96_METPP Length = 466 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 23/126 (18%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS- 60 +++D +L+ + KP +V+D DGL ++P G + +Y YR + L LGRY + Sbjct: 20 SLTDLQLKAL--KPRDKAYKVSDRDGLYAYVAPSGTVSLRYDYRIGRRRETLTLGRYDAT 77 Query: 61 -----------------LSLKDARQITADLRKLYFSGTDPRTYFEEKVE---NSMTVAQC 100 LSL +AR + ++ G P E+ +++T + Sbjct: 78 APARVPRSLDVLEYGMGLSLAEARLLLTKAKRALEQGVSPSRAKAEQKAAESDALTFGKW 137 Query: 101 LDYWFD 106 + +F+ Sbjct: 138 AERYFE 143 >UniRef50_Q31FR8 Tyrosine recombinase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FR8_THICR Length = 396 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 11/118 (9%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 +SD ++R P + ++D GLS+ I PK +F++RY + K N L LG YP Sbjct: 4 KLSDVQIRKAVH-PSTK--SLSDGKGLSIEIMPK-AKRFKFRYQRPVNKKINNLVLGYYP 59 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLD-----YWFDNYVSTT 112 S+SLK AR+I R+L G DP+ + + + Q W + + +TT Sbjct: 60 SMSLKAAREIAQQYRELLKKGIDPKYQTSSEKVDFDHIIQLYLKKGKADWSEKHFNTT 117 >UniRef50_Q0TL05 Phage integrase n=6 Tax=Escherichia coli RepID=Q0TL05_ECOL5 Length = 439 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 8/114 (7%) Query: 1 MAIS---DTKLRTIYGKPYSGPQEVAD----ADGLSVRIS-PKGVIQFQYRYRWHGKPNR 52 M + D +L ++ A GL +R+ + YRYR KP + Sbjct: 1 MTFTITQDRQLASLTVTKEEKEILFAVKSKAGGGLFIRVRYGSDNKSWIYRYRIAQKPAK 60 Query: 53 LGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD 106 L LG YP++ L AR+ AD +L G DPR + + + + + + W D Sbjct: 61 LTLGSYPAMGLAQARKAHADAIELVRKGIDPRHIRKNEKQKNEQMIIYSELWKD 114 >UniRef50_B0VTB2 Putative prophage integrase n=1 Tax=Acinetobacter baumannii SDF RepID=B0VTB2_ACIBS Length = 388 Score = 95.9 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 12/110 (10%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD +++++ KP VAD +GL++ + P G ++ YR +GK N+ LG YP + Sbjct: 2 LSDAQVKSL--KPKESRYSVADGEGLNISVFPNGKKKWVLSYRQNGKQNQKMLGEYPVMG 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTT 112 K+AR L + ++ KV NS V + ++ W S Sbjct: 60 CKEARLQARQL----------KLEYQGKVANSPPVHKVIEEWLSIMKSQW 99 >UniRef50_Q3J1E6 Possible phage-related integrase n=2 Tax=Rhodobacter sphaeroides RepID=Q3J1E6_RHOS4 Length = 413 Score = 95.2 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 4/94 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADAD--GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRY 58 M +S + I KP QE+ D+ GL + + P G +Q RYR G R+ LG + Sbjct: 1 MKLSAAGVEKI--KPTDKRQEIPDSLCVGLYLIVQPTGKKGWQVRYRHGGVHRRMSLGAF 58 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVE 92 P LSL AR+ +GTDP + Sbjct: 59 PVLSLAGARERARQTLAAASAGTDPAAEVKAAKA 92 >UniRef50_A9VZC1 Integrase family protein n=3 Tax=Alphaproteobacteria RepID=A9VZC1_METEP Length = 412 Score = 95.2 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 5/113 (4%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 A++ ++R + P AD +GL + + P G ++ R G+ +GLG + Sbjct: 21 ALTTVQVRALKV-----PGRYADGNGLYLVVEPSGSKRWLLRTIVQGRRRDIGLGGAGLV 75 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 +L +AR+ RKL G DP + T A+ + + + ++ Sbjct: 76 TLAEAREKALAYRKLARDGGDPLAERRKARATVPTFAEAAEQVHEEHKASWKN 128 >UniRef50_A5G635 Phage integrase family protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G635_GEOUR Length = 437 Score = 95.2 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 2/83 (2%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +D ++++ KP S +V + G ++R+ P GV + Y Y ++GK +L LG YP Sbjct: 17 PFTDRFIKSL--KPESEMYQVREGRGFAIRVLPTGVKTWYYIYTFNGKRRQLNLGNYPDK 74 Query: 62 SLKDARQITADLRKLYFSGTDPR 84 SL+DA ++ + L +G DP Sbjct: 75 SLEDAHKVYLESAALVKNGVDPM 97 >UniRef50_D2LKM4 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKM4_RHOVA Length = 423 Score = 95.2 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 10/121 (8%) Query: 1 MAISDTKLRTIYGKPYSGPQEVAD-ADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 MAI + L KP EV+D GL V + P G F RYR + ++ LG Sbjct: 1 MAIKLSSLSVTALKPKEKRYEVSDMETGLGVVVQPSGAKSFVVRYRLGKRLGKVTLGSAS 60 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFE---------EKVENSMTVAQCLDYWFDNYVS 110 ++L AR+ L G DP + + E+ + + +VS Sbjct: 61 DITLAAAREQARQTMALVRQGIDPAEHRKTEKAARIAAEEERKDSLFEIVAEDYIRRHVS 120 Query: 111 T 111 T Sbjct: 121 T 121 >UniRef50_D1UFB2 Integrase family protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UFB2_9BURK Length = 431 Score = 94.8 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 4/113 (3%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRL-GLGRYPS 60 ++++++R + P + VAD +GL + + G +++RY +GK L +G Y Sbjct: 35 PLTESQVRALE--PRAARYSVADGNGLVIEVMTTGTKVWRFRYSLNGKRQPLATIGDYRM 92 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTL 113 +SL+ AR +L G P + + A L + Y++T + Sbjct: 93 ISLRVARAKAQKYAELVAQGISPVATAR-RDRGAEAKADVLREAAELYMATEM 144 >UniRef50_D1DCL4 Predicted protein n=8 Tax=Neisseria gonorrhoeae RepID=D1DCL4_NEIGO Length = 356 Score = 94.8 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 3/105 (2%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++ ++ K ++AD GL + + P G ++ RYR G L LG YP++ Sbjct: 6 KLTQKQIEA--AKADGKQSKLADGGGLYLLLHPNGSKYWRMRYRHGGCEKTLALGVYPAV 63 Query: 62 SLKDARQITADLRKLYFSGTDP-RTYFEEKVENSMTVAQCLDYWF 105 SLK AR++ R +G DP + + + ++ + W+ Sbjct: 64 SLKQARELARAARAQTAAGIDPVAEHHRTRPGSGRSLPEIARAWY 108 >UniRef50_Q1GR78 Putative uncharacterized protein n=1 Tax=Sphingopyxis alaskensis RepID=Q1GR78_SPHAL Length = 108 Score = 94.8 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M + +T+L + P P +VAD G V + P G +++RYR +L +G YP+ Sbjct: 1 MPLIETRLCALE--PKDKPYKVADDRGFYVEVFPAGGKLWRFRYRIGPVEQKLSIGAYPA 58 Query: 61 LSLKDARQITADLRKLYFSGT 81 +SLK ARQ L ++ G Sbjct: 59 ISLKQARQSAWTLAQVSIDGR 79 >UniRef50_B1Y106 Integrase family protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y106_LEPCP Length = 429 Score = 94.8 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 46/137 (33%), Gaps = 31/137 (22%) Query: 4 SDTKLRTIYG------KPYSGPQEVADADGLSVRISPKGVIQ-FQYRYRWHGKPNRLGLG 56 SDT LR KP + + D GL + KG ++ Y ++GK L LG Sbjct: 8 SDTGLRAELKAIVDGKKPA---RRIGDGGGLYLLPLVKGGAHGWRLDYTFNGKRKTLSLG 64 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVE---------------------NSM 95 YP L AR+ A+ R L GTDP + + E Sbjct: 65 TYPDTGLSLARKKAAEARTLVAEGTDPSEHRKGVKEERERQHLAGQEAAQRAAAGLAEPG 124 Query: 96 TVAQCLDYWFDNYVSTT 112 ++ W + Sbjct: 125 SLEAVAADWLQHRAGAW 141 >UniRef50_B0U0U5 Phage integrase n=1 Tax=Francisella philomiragia subsp. philomiragia ATCC 25017 RepID=B0U0U5_FRAP2 Length = 398 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 4/113 (3%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +++TK++ I K Q V D GL +R+ G +Q R+ + K GLG YPS + Sbjct: 2 LTETKIKKI--KATGKEQRVIDTLGLYLRVDKNGNKTWQLRHTINEKRKWFGLGSYPSTN 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 L +AR+++A+LR+ +G D + + + V + + + + E Sbjct: 60 LNEARKLSAELRERIDNGED--ILAKPDAKKVIYVKDLVAQYIEFQKKNSSSE 110 >UniRef50_C1TKN0 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKN0_9BACT Length = 298 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 12/106 (11%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG--KPNRLGLGRYPS 60 +SDT++R + KP + D+DGL + I P G ++ R R G R +G YP Sbjct: 2 LSDTQIRKL--KPQETRYSMLDSDGLYIEILPTGKKYWRIRKRKPGGNGEIRRSIGAYPK 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD 106 + LK+ARQ +L P + +N T A+ W + Sbjct: 60 IGLKEARQKRDELVSTL-----PELGGK---KNVNTFAELAHEWLE 97 >UniRef50_B4W813 Site-specific recombinase, phage integrase family protein n=2 Tax=Brevundimonas RepID=B4W813_9CAUL Length = 525 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 9/108 (8%) Query: 4 SDTKLRTIYGKPYSGPQ--EVADADGLSVRISPKGVIQFQYRYRWHGKPNRLG-LGRYPS 60 +D +L + KP V+ A GLSVR+ P G+ QF+ RY G P R LG YP+ Sbjct: 8 TDRQLAGL--KPLDKRYERRVSGARGLSVRVWPSGLTQFEVRYAVGGGPRRRTILGDYPA 65 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLD-YW 104 +SL DAR+ LR G DP + T+ Q + YW Sbjct: 66 VSLADAREKATALRLDVLKGVDPVAERIAAQRPAPPQETLDQVAETYW 113 >UniRef50_A4A7S2 Phage-related integrase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A7S2_9GAMM Length = 412 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 15/107 (14%) Query: 21 EVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSG 80 DA+GL + ++ G + YRY+ G+ LGLG YP++SL AR R G Sbjct: 21 RHLDAEGLYLLVARGGSKNWIYRYQHEGRRRELGLGGYPAVSLAKARMRRDAARDQRQQG 80 Query: 81 TDPRTYFE---------------EKVENSMTVAQCLDYWFDNYVSTT 112 DP + E+ +MT + D + DN + Sbjct: 81 HDPLEVRDRQRAQLRAQMAAETAERERAAMTFLRVADEFIDNNAAGW 127 >UniRef50_Q1CB22 Integrase n=3 Tax=Proteobacteria RepID=Q1CB22_YERPA Length = 68 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++ ++ T KP ++AD GL + ++ G ++ +YR+ GK L LG YP Sbjct: 1 MKLNARQVET--AKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPD 58 Query: 61 LSLKDA 66 +SL A Sbjct: 59 VSLAVA 64 >UniRef50_D0W3A7 Site-specific recombinase, phage integrase family n=5 Tax=Neisseriaceae RepID=D0W3A7_NEICI Length = 81 Score = 92.5 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 2/65 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D +++ KP P ++ D GL + ++ G +Q + +GK L +G+YP+ Sbjct: 11 MPLNDRQIKN--AKPAEKPFKLNDGKGLYLYVNTNGEKLWQLDFSHNGKRKTLLIGKYPT 68 Query: 61 LSLKD 65 +SL Sbjct: 69 VSLAA 73 >UniRef50_A5WEP7 Phage integrase family protein n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WEP7_PSYWF Length = 421 Score = 92.5 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%) Query: 16 YSGPQEVADAD--GLSVRISPKGVIQFQYRYRWHG---KPNRLGLGRYPSLSLKDARQIT 70 VA A GLSVRI P G ++ RY K R+ LG +SL +A+ Sbjct: 15 RDKDYLVAVAGVPGLSVRIYPNGKKEYYLRYPHPHQPNKRPRMTLGSVEDISLHEAKTKA 74 Query: 71 ADLRKLYFSGTDPRTYFEEKVEN------SMTVAQCLDYWFDNYVST 111 + + +GTDP+ ++K N + T A+ W DN +++ Sbjct: 75 ESILDMVRNGTDPKAIRQQKQVNKYAHLTNATFAEIAAAWRDNKINS 121 >UniRef50_B8J346 Putative phage integrase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J346_DESDA Length = 208 Score = 92.1 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 23/137 (16%) Query: 1 MAISDTKLRTIYGKPYSG-----PQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGL 55 MA++ ++ K P +++D +GL + ++ + ++ RY + GK L L Sbjct: 1 MALTIKEIEAAKPKTNKKTGKQAPVKLSDENGLMLFVTSQN-KIWRARYFYMGKEQNLTL 59 Query: 56 GRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----------------TVA 98 G+YP +SLK+AR+ LR+ G +P + K E + + Sbjct: 60 GKYPLMSLKEAREANFALRQQLDRGENPAKAKKAKQEEQLAVFAEERRIARGESHPDSFG 119 Query: 99 QCLDYWFDNYVSTTLRE 115 + W + R Sbjct: 120 AIAEDWLSDVKKGWKRR 136 >UniRef50_D1UTM5 Integrase family protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UTM5_9BURK Length = 425 Score = 91.3 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD +LR P D GL+ +S G + R+R GKP L LGRYP L+ Sbjct: 9 LSDLELRRWIR--ERRPLARTDGGGLTFTLSATGTASWILRFRIGGKPEELTLGRYPDLT 66 Query: 63 LKDARQITADLRKLYFSGTDPRTY-FEEKVENSMTVAQCLDYWFDN 107 L AR++ A+ R G +P T ++K + TV Q + + + Sbjct: 67 LSAARKLAAEKRVEVQKGNNPATEKRKDKSRKNWTVRQLVSDYREK 112 >UniRef50_Q7MPT5 Site-specific recombinase, phage integrase family n=14 Tax=Gammaproteobacteria RepID=Q7MPT5_VIBVY Length = 434 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Query: 9 RTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQ 68 + + + P++ +D +GL + +G + RY LG++P +SL DAR Sbjct: 25 KQVIAYSKADPKKYSDGEGLYFCVRKQGSPYWMIRYTTAKGRREATLGQFPLMSLADARI 84 Query: 69 ITADLRKLYFSGTDPRTYFEE-KVENSMTVAQCLDYWFDNYVSTTLR 114 A RK G DP ++ ++ + TV Q W+ +S L+ Sbjct: 85 AAAYFRKEVRDGIDPLLEKQKIELPDIETVDQLFHDWYRTDLSRRLK 131 >UniRef50_D2M358 Integrase family protein n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M358_RHOPA Length = 456 Score = 90.6 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 49/132 (37%), Gaps = 20/132 (15%) Query: 4 SDTKLRTIYGKPYSG---PQEVADADG--LSVRISP-------KGVIQFQYRYRWHGKPN 51 +D R K +G P +++D G L + ++P ++ YR+HG+ Sbjct: 17 TDVDCRAARPKFDNGAWSPAKISDVTGGWLYLFVTPDVSRPGNAASKLWRMDYRFHGRQK 76 Query: 52 RLGLGRYP-----SLSLKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDY 103 +G Y + SL DAR+ + L G DP + K + AQ D Sbjct: 77 TYSIGPYGNGRDGTFSLADARRERDKAKDLLKEGKDPSIEKQLDKHKQAAARPFAQWADE 136 Query: 104 WFDNYVSTTLRE 115 W ++ Sbjct: 137 WLAKKKVEKVKR 148 >UniRef50_Q5R097 Integrase n=2 Tax=Idiomarina RepID=Q5R097_IDILO Length = 436 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 3/103 (2%) Query: 14 KPYSGP--QEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITA 71 KP VA GL + + +G ++ +YR++ K L LG +P+++LK A+ T Sbjct: 18 KPSDRDEWYRVAGGTGLRLLVRKQGGKYWRLKYRFNKKQKTLALGVFPNVTLKQAKDATI 77 Query: 72 DLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 + + G DP + N ++ W + T R Sbjct: 78 KAKAMLADGVDP-GDTKSTNTNDNSLRFYAAKWLEYQSQATAR 119 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX 142 4e-33 UniRef50_C6UP78 Integrase n=13 Tax=Escherichia coli O157:H7 RepI... 139 2e-32 UniRef50_C8UI65 Putative integrase n=1 Tax=Escherichia coli O111... 138 7e-32 UniRef50_B6C134 Putative uncharacterized protein n=1 Tax=Nitroso... 136 3e-31 UniRef50_Q8VQN9 CP4-like integrase n=87 Tax=Enterobacteriaceae R... 133 2e-30 UniRef50_D0W4G5 Site-specific recombinase, phage integrase famil... 131 6e-30 UniRef50_C2LK76 Putative uncharacterized protein n=1 Tax=Proteus... 131 7e-30 UniRef50_Q2T016 Site-specific recombinase, phage integrase famil... 130 1e-29 UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp... 129 2e-29 UniRef50_Q8W6M6 Putative uncharacterized protein orf1 n=1 Tax=Si... 129 3e-29 UniRef50_Q5P090 Integrase n=1 Tax=Aromatoleum aromaticum EbN1 Re... 129 3e-29 UniRef50_A6QCY9 Site-specific recombinase, phage integrase famil... 128 6e-29 UniRef50_D2L516 Integrase family protein n=1 Tax=Desulfovibrio s... 128 7e-29 UniRef50_C0N6F7 Site-specific recombinase, phage integrase famil... 128 7e-29 UniRef50_A5PEV9 Symbiosis island integrase (Fragment) n=2 Tax=Er... 127 1e-28 UniRef50_C3K287 Putative phage integrase n=1 Tax=Pseudomonas flu... 126 2e-28 UniRef50_Q0AH02 Phage integrase family protein n=2 Tax=Nitrosomo... 125 4e-28 UniRef50_C0GR55 Integrase family protein n=1 Tax=Desulfonatronos... 124 6e-28 UniRef50_Q1N9F3 Putative integrase prophage protein n=1 Tax=Sphi... 124 8e-28 UniRef50_B6WV41 Putative uncharacterized protein n=1 Tax=Desulfo... 123 2e-27 UniRef50_A9MQQ9 Putative uncharacterized protein n=9 Tax=Salmone... 123 2e-27 UniRef50_UPI0001AF6377 prophage PSPPH01, site-specific recombina... 123 2e-27 UniRef50_Q0P7K9 Bacteriophage integrase n=8 Tax=Enterobacteriace... 122 2e-27 UniRef50_B5AXB8 Putative integrase n=1 Tax=Escherichia coli RepI... 122 2e-27 UniRef50_Q0BEM8 Phage integrase family protein n=4 Tax=Burkholde... 122 2e-27 UniRef50_B0C8U1 Phage integrase family protein n=1 Tax=Acaryochl... 122 4e-27 UniRef50_C5V4I9 Integrase family protein n=1 Tax=Gallionella fer... 121 5e-27 UniRef50_B5F474 Integrase n=26 Tax=Proteobacteria RepID=B5F474_S... 121 6e-27 UniRef50_A3UDD1 Symbiosis island integrase n=1 Tax=Oceanicaulis ... 121 7e-27 UniRef50_C1D8D2 CP4 integrase protein n=12 Tax=Proteobacteria Re... 121 8e-27 UniRef50_B4X5T7 Site-specific recombinase, phage integrase famil... 121 8e-27 UniRef50_C7SIL5 Integrase B n=113 Tax=Gammaproteobacteria RepID=... 120 1e-26 UniRef50_B6WTC3 Putative uncharacterized protein n=1 Tax=Desulfo... 120 1e-26 UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IG... 120 1e-26 UniRef50_P08320 Integrase n=31 Tax=root RepID=VINT_BPP4 120 1e-26 UniRef50_Q48NQ4 Prophage PSPPH01, site-specific recombinase, pha... 120 1e-26 UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio R... 119 2e-26 UniRef50_Q3JN19 Prophage CP4-like integrase n=62 Tax=Proteobacte... 119 2e-26 UniRef50_P37317 Integrase n=42 Tax=root RepID=VINT_BPSFV 119 2e-26 UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomon... 119 2e-26 UniRef50_B1JDS4 Integrase family protein n=3 Tax=Pseudomonadacea... 119 3e-26 UniRef50_C1M393 Bacteriophage integrase n=1 Tax=Citrobacter sp. ... 119 3e-26 UniRef50_UPI00016B13C2 phage integrase family protein n=1 Tax=Bu... 119 3e-26 UniRef50_Q3SHC8 Probable cp4-like integrase protein n=1 Tax=Thio... 119 3e-26 UniRef50_C8T7N5 Phage integrase family site-specific recombinase... 119 3e-26 UniRef50_D0KY10 Integrase family protein n=1 Tax=Halothiobacillu... 119 4e-26 UniRef50_A5EQ25 P4-like integrase n=1 Tax=Bradyrhizobium sp. BTA... 119 4e-26 UniRef50_UPI0000E0FEDC DNA integration/recombination/inversion p... 118 5e-26 UniRef50_A3M8S0 Putative integrase n=1 Tax=Acinetobacter baumann... 118 5e-26 UniRef50_Q0C1T8 Site-specific recombinase, phage integrase famil... 117 8e-26 UniRef50_A6SWC6 Prophage integrase n=1 Tax=Janthinobacterium sp.... 117 1e-25 UniRef50_B3A9A3 Prophage integrase n=2 Tax=Escherichia coli O157... 116 2e-25 UniRef50_B0RRY6 Complete genome, strain B100 n=3 Tax=Proteobacte... 116 2e-25 UniRef50_B5F8X4 Integrase n=1 Tax=Salmonella enterica subsp. ent... 116 2e-25 UniRef50_Q2NQD5 Putative phage integrase n=1 Tax=Sodalis glossin... 116 3e-25 UniRef50_A1VQL7 Phage integrase family protein n=2 Tax=Burkholde... 116 3e-25 UniRef50_A4JAY4 Phage integrase family protein n=22 Tax=Bacteria... 115 3e-25 UniRef50_C0VMW7 Phage integrase n=2 Tax=Acinetobacter RepID=C0VM... 115 3e-25 UniRef50_A1WLK0 Phage integrase family protein n=4 Tax=Burkholde... 115 4e-25 UniRef50_Q5P707 Phage-related integrase n=2 Tax=Proteobacteria R... 115 4e-25 UniRef50_Q6LJV6 Hypothetical site-specific recombinase, phageint... 115 4e-25 UniRef50_D0CDZ4 DNA integration/recombination/inversion protein ... 115 4e-25 UniRef50_C0Z3X8 Integrase (Fragment) n=8 Tax=Enterobacteriaceae ... 115 4e-25 UniRef50_A1W8P6 Phage integrase family protein n=4 Tax=Comamonad... 115 5e-25 UniRef50_Q167M4 CP4-like integrase, putative n=40 Tax=Alphaprote... 115 5e-25 UniRef50_A6VC70 Integrase n=11 Tax=Proteobacteria RepID=A6VC70_P... 115 5e-25 UniRef50_C8R2J0 Integrase family protein n=1 Tax=Desulfurivibrio... 115 6e-25 UniRef50_C7I2C4 Putative integrase n=1 Tax=Thiomonas intermedia ... 114 7e-25 UniRef50_A5EXV7 Integrase A2 n=6 Tax=Cardiobacteriaceae RepID=A5... 114 7e-25 UniRef50_A1BGX1 Phage integrase family protein n=25 Tax=root Rep... 114 8e-25 UniRef50_A3ZAX6 Prophage CP4-like integrase n=2 Tax=Synechococcu... 114 8e-25 UniRef50_D2LIX3 Integrase family protein n=1 Tax=Rhodomicrobium ... 114 8e-25 UniRef50_C8KXV2 Prophage CP4-57-like integrase n=1 Tax=Actinobac... 114 9e-25 UniRef50_C4GIW0 Putative uncharacterized protein n=1 Tax=Kingell... 114 1e-24 UniRef50_B9Z434 Integrase family protein n=2 Tax=Neisseriaceae R... 114 1e-24 UniRef50_UPI00016B0CE6 putative integrase n=1 Tax=Burkholderia p... 114 1e-24 UniRef50_B9MGW9 Integrase family protein n=1 Tax=Diaphorobacter ... 114 1e-24 UniRef50_D1B120 Integrase family protein n=1 Tax=Sulfurospirillu... 114 1e-24 UniRef50_A1WW57 Phage integrase family protein n=4 Tax=Proteobac... 113 1e-24 UniRef50_B0QT04 Prophage CP4-57-like integrase n=1 Tax=Haemophil... 113 1e-24 UniRef50_C8NCE3 Phage integrase family site-specific recombinase... 113 2e-24 UniRef50_C6RLT7 Phage integrase n=2 Tax=Acinetobacter radioresis... 113 2e-24 UniRef50_A6Q4N1 Site-specific recombinase, phage integrase famil... 113 2e-24 UniRef50_Q93UI5 Integrase-like gene 1 n=1 Tax=Escherichia coli R... 113 2e-24 UniRef50_A9VZC1 Integrase family protein n=3 Tax=Alphaproteobact... 112 2e-24 UniRef50_UPI00019048C6 phage integrase n=1 Tax=Rhizobium etli Br... 112 2e-24 UniRef50_UPI00016954D2 DNA integration/recombination/inversion p... 112 3e-24 UniRef50_P76542 Putative prophage CPZ-55 integrase n=6 Tax=Enter... 112 3e-24 UniRef50_C6E138 Integrase family protein n=1 Tax=Geobacter sp. M... 112 3e-24 UniRef50_B4RZR6 Prophage CP4-like integrase n=2 Tax=Proteobacter... 112 3e-24 UniRef50_B7I7W7 Integrase n=4 Tax=Pseudomonadales RepID=B7I7W7_A... 112 4e-24 UniRef50_A1TYD6 Phage integrase family protein n=1 Tax=Marinobac... 112 4e-24 UniRef50_B8L9U1 Phage integrase family protein n=1 Tax=Stenotrop... 112 4e-24 UniRef50_A5PCI3 Phage integrase n=1 Tax=Erythrobacter sp. SD-21 ... 112 4e-24 UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepI... 112 5e-24 UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria ... 112 5e-24 UniRef50_A4VPC8 Site-specific recombinase, phage integrase famil... 111 5e-24 UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID... 111 5e-24 UniRef50_A4F5J8 Putative uncharacterized protein n=1 Tax=uncultu... 111 6e-24 UniRef50_A3M3W1 Phage integrase n=4 Tax=Acinetobacter baumannii ... 111 6e-24 UniRef50_C3XC22 Integrase n=3 Tax=Oxalobacter formigenes RepID=C... 111 7e-24 UniRef50_D0BVL9 Phage integrase n=2 Tax=Acinetobacter RepID=D0BV... 111 7e-24 UniRef50_Q4QL03 Prophage CP4-57-like integrase n=11 Tax=Haemophi... 111 8e-24 UniRef50_C8U7P7 Integrase n=30 Tax=root RepID=C8U7P7_ECO10 111 8e-24 UniRef50_Q2YCS6 Putative uncharacterized protein n=1 Tax=Nitroso... 111 9e-24 UniRef50_B5QDA8 Phage integrase family protein n=1 Tax=Salmonell... 111 1e-23 UniRef50_A9I0E1 Phage-related integrase n=5 Tax=Burkholderiales ... 111 1e-23 UniRef50_A5G0X3 Putative uncharacterized protein n=2 Tax=Acidiph... 110 1e-23 UniRef50_B8F555 CP4-57 prophage, integrase n=1 Tax=Haemophilus p... 110 1e-23 UniRef50_Q74H29 Integrative genetic element Gsu32, integrase n=1... 110 1e-23 UniRef50_B3GXJ8 Prophage CP4-57 integrase n=4 Tax=Pasteurellacea... 110 1e-23 UniRef50_A6F4S5 Putative integrase n=1 Tax=Marinobacter algicola... 110 2e-23 UniRef50_A7MWW9 Putative uncharacterized protein n=1 Tax=Vibrio ... 110 2e-23 UniRef50_C6XEE3 Integrase family protein n=2 Tax=Proteobacteria ... 109 2e-23 UniRef50_A8EWJ5 Phage integrase n=1 Tax=Arcobacter butzleri RM40... 109 2e-23 UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium ... 109 2e-23 UniRef50_D0SJJ0 Phage integrase n=6 Tax=Acinetobacter RepID=D0SJ... 109 2e-23 UniRef50_A1SRI6 Phage integrase family protein n=2 Tax=Alteromon... 109 2e-23 UniRef50_A4SSF4 Phage integrase n=3 Tax=Proteobacteria RepID=A4S... 109 2e-23 UniRef50_B8EF22 Integrase family protein n=3 Tax=Shewanella balt... 109 3e-23 UniRef50_Q8ECV9 Site-specific recombinase, phage integrase famil... 109 3e-23 UniRef50_B1Y4T5 Integrase family protein n=3 Tax=Betaproteobacte... 109 3e-23 UniRef50_B0RMR5 Prophage integrase n=3 Tax=Xanthomonas campestri... 109 3e-23 UniRef50_A5V414 Phage integrase family protein n=1 Tax=Sphingomo... 109 3e-23 UniRef50_P32053 Prophage CP4-57 integrase n=104 Tax=Gammaproteob... 109 4e-23 UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804... 109 4e-23 UniRef50_A5EUW8 Bacteriophage P4-like integrase n=3 Tax=root Rep... 109 4e-23 UniRef50_B7MX56 Integrase from prophage n=96 Tax=Gammaproteobact... 109 4e-23 UniRef50_Q0I4F8 Integrase n=1 Tax=Haemophilus somnus 129PT RepID... 108 5e-23 UniRef50_Q1R2C9 Integrase-like protein n=9 Tax=root RepID=Q1R2C9... 108 5e-23 UniRef50_A7JSX8 Bacteriophage integrase n=3 Tax=Pasteurellaceae ... 108 6e-23 UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella Rep... 107 8e-23 UniRef50_A0KW55 Phage integrase family protein n=30 Tax=Gammapro... 107 1e-22 UniRef50_B7I6Z3 Site-specific recombinase, phage integrase famil... 107 1e-22 UniRef50_Q1Q875 Phage integrase n=3 Tax=Gammaproteobacteria RepI... 107 1e-22 UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphil... 107 1e-22 UniRef50_D2MI75 Phage integrase family protein n=1 Tax=Candidatu... 107 1e-22 UniRef50_A6VNS1 Phage integrase family protein n=7 Tax=Pasteurel... 107 1e-22 UniRef50_B8GNQ7 Phage integrase family protein n=6 Tax=Proteobac... 107 1e-22 UniRef50_Q0F3U9 Prophage CP4-like integrase n=1 Tax=Mariprofundu... 107 1e-22 UniRef50_Q4QNN7 Prophage CP4-57-like integrase n=4 Tax=Haemophil... 107 2e-22 UniRef50_UPI0001BCF971 integrase n=1 Tax=Mannheimia haemolytica ... 106 2e-22 UniRef50_A1ATP4 Phage integrase family protein n=2 Tax=Desulfuro... 106 2e-22 UniRef50_Q5E028 Phage family integrase n=2 Tax=Vibrionaceae RepI... 106 2e-22 UniRef50_A3M8T8 Phage integrase n=1 Tax=Acinetobacter baumannii ... 106 2e-22 UniRef50_B7N6K6 Prophage CP4-57 integrase n=8 Tax=Enterobacteria... 106 2e-22 UniRef50_C6RGV6 Phage integrase n=3 Tax=Campylobacter RepID=C6RG... 106 3e-22 UniRef50_A1SXI0 Phage integrase n=1 Tax=Psychromonas ingrahamii ... 106 3e-22 UniRef50_Q1QA94 Phage integrase n=1 Tax=Psychrobacter cryohalole... 106 3e-22 UniRef50_B4WZP4 Site-specific recombinase, phage integrase famil... 106 3e-22 UniRef50_C0VMY9 Integrase n=1 Tax=Acinetobacter sp. ATCC 27244 R... 106 3e-22 UniRef50_Q6AR70 Probable prophage integrase n=1 Tax=Desulfotalea... 106 3e-22 UniRef50_C9M6R5 Site-specific recombinase, phage integrase famil... 106 3e-22 UniRef50_C8QZM9 Integrase family protein n=1 Tax=Desulfurivibrio... 106 3e-22 UniRef50_P06155 Integrase n=9 Tax=root RepID=VINT_BPPH8 105 5e-22 UniRef50_B6BKY5 DNA integration/recombination/inversion protein ... 105 5e-22 UniRef50_B9NUX0 Site-specific recombinase, phage integrase famil... 105 5e-22 UniRef50_D0J426 Phage integrase n=1 Tax=Comamonas testosteroni C... 104 6e-22 UniRef50_A0YFV5 Integrase, phage related protein n=1 Tax=marine ... 104 8e-22 UniRef50_A1ANR7 Phage integrase family protein n=1 Tax=Pelobacte... 104 8e-22 UniRef50_A7ZQ61 Phage integrase family protein n=32 Tax=Gammapro... 104 8e-22 UniRef50_A7JZW2 Site-specific recombinase, phage integrase famil... 104 8e-22 UniRef50_Q1QLT5 Phage integrase n=2 Tax=Alphaproteobacteria RepI... 104 8e-22 UniRef50_C7HXY0 Integrase family protein n=1 Tax=Thiomonas inter... 104 9e-22 UniRef50_C6ALW6 Prophage integrase n=2 Tax=Pasteurellaceae RepID... 104 1e-21 UniRef50_Q4K6S7 Site-specific recombinase, phage integrase famil... 104 1e-21 UniRef50_C4U2J7 Phage integrase family protein n=1 Tax=Yersinia ... 104 1e-21 UniRef50_B8F737 Phage integrase family site specific recombinase... 104 1e-21 UniRef50_C6DZF1 Integrase family protein n=1 Tax=Geobacter sp. M... 104 1e-21 UniRef50_C3NUM0 Phage Integrase n=55 Tax=root RepID=C3NUM0_VIBCJ 104 1e-21 UniRef50_B1Y3M2 Integrase family protein n=4 Tax=Proteobacteria ... 104 1e-21 UniRef50_B5WB94 Integrase n=1 Tax=Burkholderia sp. H160 RepID=B5... 104 1e-21 UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium ML... 104 1e-21 UniRef50_A7H0X5 DNA integration/recombination/inversion protein ... 103 2e-21 UniRef50_A4BQA0 Prophage CP4-like integrase n=1 Tax=Nitrococcus ... 103 2e-21 UniRef50_B7NKE6 Integrase of prophage n=42 Tax=Enterobacteriacea... 103 2e-21 UniRef50_C6RPH9 Site-specific recombinase, phage integrase famil... 102 2e-21 UniRef50_C1TL52 Integrase n=1 Tax=Dethiosulfovibrio peptidovoran... 102 3e-21 UniRef50_A3J962 Putative integrase prophage protein n=1 Tax=Mari... 102 3e-21 UniRef50_Q0I4P6 Integrase n=14 Tax=Pasteurellaceae RepID=Q0I4P6_... 102 3e-21 UniRef50_D0SUB2 Predicted protein n=2 Tax=Acinetobacter RepID=D0... 102 4e-21 UniRef50_Q1NEP8 Putative integrase n=1 Tax=Sphingomonas sp. SKA5... 102 4e-21 UniRef50_B7XGJ8 Integrase n=9 Tax=root RepID=B7XGJ8_PSEPU 102 5e-21 UniRef50_A5F3U5 Site-specific recombinase, phage integrase famil... 101 5e-21 UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EV... 101 6e-21 UniRef50_B4T1L5 Phage integrase family protein n=12 Tax=Enteroba... 101 7e-21 UniRef50_D0SZI9 Integrase n=14 Tax=cellular organisms RepID=D0SZ... 101 8e-21 UniRef50_D1D4Y4 Site-specific recombinase n=19 Tax=Neisseria Rep... 101 1e-20 UniRef50_Q1NGR6 Putative phage integrase n=1 Tax=Sphingomonas sp... 100 1e-20 UniRef50_A1W6C2 Phage integrase family protein n=8 Tax=Burkholde... 100 1e-20 UniRef50_Q483M1 Site-specific recombinase, phage integrase famil... 100 1e-20 UniRef50_C6RSU9 Phage integrase family protein n=3 Tax=Acinetoba... 100 2e-20 UniRef50_Q7MPT5 Site-specific recombinase, phage integrase famil... 100 2e-20 UniRef50_C8Q072 Phage integrase family protein n=1 Tax=Enhydroba... 100 2e-20 UniRef50_A0Q3W3 Phage integrase n=8 Tax=Francisella RepID=A0Q3W3... 100 2e-20 UniRef50_D1AZM1 Integrase family protein n=1 Tax=Sulfurospirillu... 100 2e-20 UniRef50_Q2T3P2 Integrase n=31 Tax=pseudomallei group RepID=Q2T3... 99 3e-20 UniRef50_A4N808 DNA polymerase III subunit delta n=4 Tax=Haemoph... 99 3e-20 UniRef50_D1Y3S1 Site-specific recombinase, phage integrase famil... 99 4e-20 UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacteriu... 99 5e-20 UniRef50_B8J346 Putative phage integrase n=1 Tax=Desulfovibrio d... 98 7e-20 UniRef50_A8EUF6 Putative phage integrase n=1 Tax=Arcobacter butz... 98 7e-20 UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas put... 98 8e-20 UniRef50_A1AQ50 Phage integrase family protein n=1 Tax=Pelobacte... 98 8e-20 UniRef50_B1JMJ4 Integrase family protein n=2 Tax=Enterobacteriac... 98 1e-19 UniRef50_B5EWV2 Integrase n=2 Tax=Gammaproteobacteria RepID=B5EW... 98 1e-19 UniRef50_C6N3S0 Putative phage integrase family protein n=1 Tax=... 97 1e-19 UniRef50_D2LKM4 Integrase family protein n=1 Tax=Rhodomicrobium ... 97 1e-19 UniRef50_P39347 Putative prophage P4 integrase n=97 Tax=Enteroba... 97 1e-19 UniRef50_B9D1P3 DNA integration/recombination/inversion protein ... 97 1e-19 UniRef50_B5JZM6 Site-specfic recombinase, phage integrase family... 97 1e-19 UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE4... 97 2e-19 UniRef50_Q2NDX8 Site-specfic recombinase, phage integrase family... 97 2e-19 UniRef50_C3MAV8 DNA integration/recombination/invertion protein ... 96 2e-19 UniRef50_Q0I233 Phage integrase n=5 Tax=Pasteurellaceae RepID=Q0... 96 3e-19 UniRef50_Q083S5 Phage integrase family protein n=3 Tax=Shewanell... 96 3e-19 UniRef50_C8PFJ4 DNA integration/recombination/inversion protein ... 96 3e-19 UniRef50_Q1GLB2 Phage integrase n=12 Tax=Rhodobacterales RepID=Q... 96 4e-19 UniRef50_C8PUK8 Phage integrase family protein n=1 Tax=Enhydroba... 95 5e-19 UniRef50_A7IMK8 Integrase family protein n=39 Tax=Bacteria RepID... 95 6e-19 UniRef50_B5BIF0 Integrase n=7 Tax=Salmonella enterica subsp. ent... 95 8e-19 UniRef50_B0U0U5 Phage integrase n=1 Tax=Francisella philomiragia... 95 8e-19 UniRef50_A4A7S2 Phage-related integrase n=1 Tax=Congregibacter l... 94 9e-19 UniRef50_B0SXU9 Integrase family protein n=6 Tax=Proteobacteria ... 94 1e-18 UniRef50_D0T0P6 Prophage Sf6-like integrase (Fragment) n=1 Tax=A... 94 1e-18 UniRef50_Q7MDZ9 Phage integrase n=2 Tax=Vibrio RepID=Q7MDZ9_VIBVY 94 1e-18 UniRef50_A6FPT0 Site-specfic recombinase, phage integrase family... 94 2e-18 UniRef50_Q2N8A1 Symbiosis island integrase n=12 Tax=Bacteria Rep... 94 2e-18 UniRef50_A4Y9I4 Phage integrase family protein n=3 Tax=Shewanell... 93 2e-18 UniRef50_A1U0R6 Phage integrase family protein n=2 Tax=Gammaprot... 93 2e-18 UniRef50_Q1GUV7 Phage integrase n=1 Tax=Sphingopyxis alaskensis ... 93 2e-18 UniRef50_A4SIA1 Phage integrase family protein n=2 Tax=Gammaprot... 93 3e-18 UniRef50_D1DCL4 Predicted protein n=8 Tax=Neisseria gonorrhoeae ... 93 3e-18 UniRef50_C6V8W5 Integrase n=4 Tax=Enterobacteriaceae RepID=C6V8W... 93 4e-18 UniRef50_A7FP63 Site-specific recombinase, phage integrase famil... 93 4e-18 UniRef50_B0VTB2 Putative prophage integrase n=1 Tax=Acinetobacte... 92 4e-18 UniRef50_B4W813 Site-specific recombinase, phage integrase famil... 92 5e-18 UniRef50_B9R123 Site-specific recombinase, phage integrase famil... 92 5e-18 UniRef50_B6B4D0 Integrase n=1 Tax=Rhodobacterales bacterium HTCC... 92 6e-18 UniRef50_D1ZVQ9 Whole genome shotgun sequence assembly, contig_3... 91 8e-18 UniRef50_Q5LS43 Site-specfic recombinase, phage integrase family... 91 9e-18 UniRef50_D1UTM5 Integrase family protein n=1 Tax=Burkholderia sp... 91 9e-18 UniRef50_Q0EWR9 Integrative genetic element Gsu32, integrase n=1... 91 1e-17 UniRef50_Q5ZWK0 Phage related integrase n=15 Tax=Proteobacteria ... 91 1e-17 UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria ... 91 1e-17 UniRef50_Q39TC0 Phage integrase n=1 Tax=Geobacter metallireducen... 91 1e-17 UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP... 91 1e-17 UniRef50_Q6LRH5 Putative uncharacterized protein n=3 Tax=Vibrion... 90 2e-17 UniRef50_Q0TL05 Phage integrase n=6 Tax=Escherichia coli RepID=Q... 90 2e-17 UniRef50_Q72AY5 Integrase, truncation n=1 Tax=Desulfovibrio vulg... 90 2e-17 Sequences not found previously or not previously below threshold: >UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX Length = 394 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K++ KP P ++AD G+ + I+ G ++ +YR+ GK L +G YP Sbjct: 1 MALTDIKVK--TAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVSTT 112 ++L DAR+ ++ RKL +G DP +E+ T W + Sbjct: 59 VTLADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQSKADRW 115 >UniRef50_C6UP78 Integrase n=13 Tax=Escherichia coli O157:H7 RepID=C6UP78_ECO5T Length = 301 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 13/125 (10%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DTK+R+ KP + D DG+S+ + P G +++R+R+ GK + + G YP Sbjct: 27 MALTDTKVRS--AKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPD 84 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS----MTVAQCLDYWF-------DNYV 109 +SL DAR+ + RKL +G DPR + E +T + W +++ Sbjct: 85 VSLADARKKREEARKLVAAGIDPREHKRAVKEEQAKEIITFEKVAREWLVTNQKWSEDHA 144 Query: 110 STTLR 114 + + Sbjct: 145 NRVKK 149 >UniRef50_C8UI65 Putative integrase n=1 Tax=Escherichia coli O111:H- str. 11128 RepID=C8UI65_ECO1A Length = 352 Score = 138 bits (347), Expect = 7e-32, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++ ++ KP ++AD GL + + P G ++ +YR GK L LG YP Sbjct: 1 MKLNARQID--TAKPKEKAYKLADGGGLYLLVKPNGGKYWRLKYRVAGKEKLLALGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTT 112 ++L DAR D ++ G DP E+ + + T W + + Sbjct: 59 VTLADARAKREDAKRGIAGGIDPMEAKREEKIARETQLNNTFKDIALEWHSSKLKKW 115 >UniRef50_B6C134 Putative uncharacterized protein n=1 Tax=Nitrosococcus oceani AFC27 RepID=B6C134_9GAMM Length = 189 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT +R KP +++ D+ GL + ++P G ++ +YR+ GK RL LG YP Sbjct: 1 MPLTDTTIRN--AKPGDKAKKLFDSGGLYLEVAPSGGKWWRLKYRFGGKEKRLSLGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVSTT 112 +SLKDAR+ + RKL + DP K + + WF +V Sbjct: 59 VSLKDARERRDEARKLLANEIDPSENRRAKKAAREERVANSFEVVAREWFAKHVPNW 115 >UniRef50_Q8VQN9 CP4-like integrase n=87 Tax=Enterobacteriaceae RepID=Q8VQN9_ECOLX Length = 421 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 5/112 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K+R KP ++ D G+ + + P G ++ RYR GK L LG YP Sbjct: 1 MALTDAKIRA--AKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV---ENSMTVAQCLDYWFDNYV 109 +SL +AR + RKL G DP K + ++ W + Sbjct: 59 VSLSEARTKRDEARKLISEGIDPCEQKRAKKVVPDLQLSFEHIARRWHASNK 110 >UniRef50_D0W4G5 Site-specific recombinase, phage integrase family n=4 Tax=Neisseria RepID=D0W4G5_NEICI Length = 428 Score = 131 bits (331), Expect = 6e-30, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 7/118 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D ++R KP P ++ D GL + I+ G +++ + +GK L +G+YP+ Sbjct: 24 MKLNDRQIRN--AKPAEKPYKLNDGKGLYLYINTSGGKLWRFDFACNGKRKTLSIGKYPT 81 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVSTTL 113 +SL +AR+ R++ +G DP +++ E T W + ++ Sbjct: 82 VSLAEARETAETARRMLAAGQDPSEAKQQEKEERKAAALNTFESIARRWHTDNLTRWK 139 >UniRef50_C2LK76 Putative uncharacterized protein n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LK76_PROMI Length = 142 Score = 131 bits (330), Expect = 7e-30, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 6/115 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SDTK+R+ K ++ D +GL + + P G +++RYR+ GK L G YP Sbjct: 27 MALSDTKVRS--AKSEDKAYKLTDGNGLFLLVHPNGSKYWRFRYRFGGKEKMLAFGVYPD 84 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS----MTVAQCLDYWFDNYVST 111 +SL +AR+ + RKL SG DP +E E T + W + Sbjct: 85 ISLANAREKRDEARKLVASGVDPSEKRKEVKEEQQKEFNTFEKVARDWHATNKAR 139 >UniRef50_Q2T016 Site-specific recombinase, phage integrase family n=30 Tax=Bacteria RepID=Q2T016_BURTA Length = 438 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 7/116 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++D K+R KP P +AD GL +++ P G ++ +YR+ GK G YP + Sbjct: 47 PLTDLKVR--RAKPAEQPYRLADGKGLYLQVMPNGSRYWRMKYRFDGKEKLASFGVYPEV 104 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNYVSTT 112 SL ARQ RKL +GTDP E S + WF++ Sbjct: 105 SLAQARQACLAARKLLAAGTDPTEQKREIKRARAIEASSSFEAVAREWFESQKDGW 160 >UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MJ08_9PROT Length = 418 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 15/127 (11%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT ++ KP + P +AD G+ + + P G ++ YR+ K L LG YP Sbjct: 1 MKLTDTAIKK--AKPQAKPYRIADGGGMYIEVKPNGAKYWRMAYRFADKQKTLALGVYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDY--------WFDN 107 ++L DAR + RKL +G DP + + + + + W N Sbjct: 59 VTLADARDRRNEARKLLANGADPGAVKQSQKKQAKIAASNSFELIAREFHSLKTPMWSTN 118 Query: 108 YVSTTLR 114 + + ++ Sbjct: 119 HAADWIK 125 >UniRef50_Q8W6M6 Putative uncharacterized protein orf1 n=1 Tax=Sinorhizobium phage PBC5 RepID=Q8W6M6_9CAUD Length = 433 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 7/119 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 A++D +++ K ++AD GL++ + G ++ RYR+ GK L +G YP + Sbjct: 3 ALTDKQIKN--AKKADKDYKLADGGGLNLFVLSTGTKSWRLRYRFDGKEKTLVIGNYPDV 60 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTTLRE 115 SL DAR ++ SG DP + + + + T W T + + Sbjct: 61 SLADARGEREAAKETLKSGRDPNVVKKIEKAIGKQQAADTFEVLAREWHKLQKPTWVEK 119 >UniRef50_Q5P090 Integrase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P090_AZOSE Length = 402 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 7/119 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D +R + K + P ++AD GL + ++P G ++YR+R GK N +G YP Sbjct: 1 MQLTDKAIRGV--KGGAKPVKMADGGGLYLEVTPAGGKLWRYRFRLAGKENVFAIGAYPR 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVSTTLR 114 +SL DAR+ + R L G +P Y ++ + T A D W+ + V + + Sbjct: 59 VSLADARKARDEARDLVKQGFNPSHYRQQAKQAVIDENLNTFAPVADEWYQSKVDSWSK 117 >UniRef50_A6QCY9 Site-specific recombinase, phage integrase family n=2 Tax=Proteobacteria RepID=A6QCY9_SULNB Length = 409 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 10/119 (8%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++D +++ KP ++ D GL + I+PKG ++ +YR+ GK R+ LG YP+ Sbjct: 7 PLTDKEIKA--AKPKEKEYKLFDGGGLYLSITPKGQKWWRLKYRFDGKEKRISLGVYPNT 64 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVEN--------SMTVAQCLDYWFDNYVSTT 112 SL+DARQ D + G DP +EK E T W + Sbjct: 65 SLQDARQQREDFKTQIAKGIDPSRERKEKKEAVKAEVFKSRNTFKSICLEWIELQRPQM 123 >UniRef50_D2L516 Integrase family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L516_9DELT Length = 417 Score = 128 bits (321), Expect = 7e-29, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 10/120 (8%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 + ++D +R K P ++ D GL ++++P G ++++Y + GK L LG++P Sbjct: 6 IPLTDVAIRN--AKAADKPVKMFDGAGLFLQVTPTGGKLWRFKYLFDGKEKLLALGKWPD 63 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV--------ENSMTVAQCLDYWFDNYVSTT 112 + LK ARQ + R L G DP ++ EN+ T A W V Sbjct: 64 VGLKMARQRRDEARALVAQGVDPSEKRKQDRADAEGQAVENANTFAVVARDWHAKQVKVW 123 >UniRef50_C0N6F7 Site-specific recombinase, phage integrase family protein n=2 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6F7_9GAMM Length = 401 Score = 128 bits (321), Expect = 7e-29, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 10/125 (8%) Query: 1 MAISDTKLRTIYG------KPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLG 54 M ++D +++ + + P +V+D+ GL + + KG +++Y++ + G +L Sbjct: 1 MPLTDKQIKNLKPGIRPDKSETNKPYKVSDSHGLYIEVPLKGSKRWRYKFYFEGTERKLS 60 Query: 55 LGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENS----MTVAQCLDYWFDNYVS 110 LG YP +SLK+ARQ D+RK +G DP +K N+ T + W + Sbjct: 61 LGTYPKISLKEARQKRDDIRKKIDAGIDPSYERRKKRLNASVSGNTYEEVAREWHARNKA 120 Query: 111 TTLRE 115 ++ Sbjct: 121 NWTKK 125 >UniRef50_A5PEV9 Symbiosis island integrase (Fragment) n=2 Tax=Erythrobacter sp. SD-21 RepID=A5PEV9_9SPHN Length = 163 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 7/119 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT+LR + KP P +V D GL V ++P G +++RYR G +L +G YP Sbjct: 1 MPLTDTRLRAL--KPKDKPYKVTDERGLYVEVTPTGSKLWRFRYRIGGAQKKLCIGSYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNYVSTTLR 114 +SLK AR + R+ SG DP ++ ++ T + + + R Sbjct: 59 ISLKQARDAAYEARRAVASGGDPAFEKRKRKIRAEFLSAQTFEAVAREYIEQMMVQNGR 117 >UniRef50_C3K287 Putative phage integrase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K287_PSEFS Length = 401 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M + DT R KP P + D GL + + P G ++ +YR+ GK RL LG YP Sbjct: 1 MPLKDTNCRN--AKPQDKPYRLYDEQGLYLEVQPNGGRYWRLKYRFLGKEKRLALGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTT 112 + L++AR+ D R SG DP ++ T W + S+ Sbjct: 59 VGLQEARRKRDDARVQLASGQDPSLQRRMAKVVSQLDHQHTFESVATQWLNIRESSW 115 >UniRef50_Q0AH02 Phage integrase family protein n=2 Tax=Nitrosomonas eutropha C91 RepID=Q0AH02_NITEC Length = 393 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 15/128 (11%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D+ +R KP ++ D +GL++ I P G ++YRY ++ K + L LG+YP Sbjct: 1 MKLTDSAIRA--AKPKEKQYKLTDGNGLTLLIYPDGSKHWRYRYLFNEKESMLSLGKYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWF--------DN 107 +L AR I + + G +P T+ +E+ + + W+ + Sbjct: 59 TTLAQARSIHDGYKAILKQGINPSTHRKEEKRKAIVSVENSFEAVARTWWMHWKHAKTER 118 Query: 108 YVSTTLRE 115 +V+ TLR Sbjct: 119 HVAYTLRR 126 >UniRef50_C0GR55 Integrase family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR55_9DELT Length = 401 Score = 124 bits (313), Expect = 6e-28, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 3/113 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++D +++ + KP S V D DG+ + ++P G ++++YR++GK L LG+YP Sbjct: 1 MSLTDVQVKGL--KPGSTKYRVKDKDGMYLEVTPAGGKLWRFKYRFNGKNKLLALGKYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE-EKVENSMTVAQCLDYWFDNYVSTT 112 +SL AR+ + R+ G DP + EK E T D W+ ST Sbjct: 59 VSLAKAREKLSIARQQIAEGKDPAYIKKIEKAEKENTFKAITDEWWRAKKSTW 111 >UniRef50_Q1N9F3 Putative integrase prophage protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9F3_9SPHN Length = 443 Score = 124 bits (312), Expect = 8e-28, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++ +++ KP + +AD+ GL + ++ G ++YRYR K L LGRYP Sbjct: 1 MSLTIVEIKN--AKPQASDYRLADSQGLFLHVTSAGGKFWRYRYRIGPKEKTLTLGRYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTT 112 + L AR+ + RKL G DP ++ +T + + W + Sbjct: 59 MGLVAAREAHHEARKLVSEGKDPALEKQKAKIARIEAAKITFRKLAEEWLADQEPIW 115 >UniRef50_B6WV41 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV41_9DELT Length = 401 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 6/115 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++DT +R KP P ++AD+ GL V ++P G ++ +YR+ GK +G YP++ Sbjct: 4 KLTDTAIR--TAKPKEKPYKMADSGGLYVLVNPGGGKLWRLKYRFEGKERLFAIGTYPAV 61 Query: 62 SLKDARQITADLRKLYFSGTDP----RTYFEEKVENSMTVAQCLDYWFDNYVSTT 112 SLK+AR +++ G DP + E + S T W ++ Sbjct: 62 SLKEARARAVTAKEMIARGVDPCAARKAAKAEAIARSRTFEVVAREWHKKKLAGW 116 >UniRef50_A9MQQ9 Putative uncharacterized protein n=9 Tax=Salmonella enterica RepID=A9MQQ9_SALAR Length = 247 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 5/115 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D+K+R+ K ++ D+ GL + +S G + +RYR+ GK NRL G YP Sbjct: 1 MALNDSKIRS--AKTLDKSYKLTDSQGLYLTVSTSGAKLWYFRYRFDGKENRLAFGAYPL 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWFDNYVSTT 112 ++L +AR+ RKL SG P + V+ S T W + + Sbjct: 59 VTLAEAREKRDAARKLLASGICPSQLRKTNDASVDESRTFKFIATAWHTSCLKLW 113 >UniRef50_UPI0001AF6377 prophage PSPPH01, site-specific recombinase phage integrase family protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF6377 Length = 393 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 7/116 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++ K+R + KP P ++ D+ GL + ++P G ++YR+R GK N +G YP Sbjct: 1 MPLTAVKIR--HAKPGPAPIKLTDSGGLFLEVTPGGNKLWRYRFRLAGKENTYAIGSYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVST 111 LSL DAR R+L G +P + ENS T + W + ++ Sbjct: 59 LSLSDARAERDAARELVKLGRNPAHVRQTVKAQQLSENSNTFKVVAEEWIEKRLAN 114 >UniRef50_Q0P7K9 Bacteriophage integrase n=8 Tax=Enterobacteriaceae RepID=Q0P7K9_ECOLX Length = 423 Score = 122 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 5/113 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++D K+R++ KP P +V+D+ GL + + P G + +YR +GK +R+ LG YP+ Sbjct: 1 MSLNDAKIRSL--KPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEK---VENSMTVAQCLDYWFDNYVS 110 +SL DARQ +RK+ +P + W + Sbjct: 59 VSLSDARQQREGIRKMLALNINPAQQRAAERGSRMQEKMFKSVALEWHSSKKK 111 >UniRef50_B5AXB8 Putative integrase n=1 Tax=Escherichia coli RepID=B5AXB8_ECOLX Length = 396 Score = 122 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 7/112 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRW--HGKPNRLGLGRYP 59 ++D +L++ KP +++D GL + +S G ++ +YR K +RL G YP Sbjct: 8 KLTDRQLQS--TKPRDKTYKLSDGGGLYLEVSQTGSKYWRMKYRRPSDKKEDRLAFGVYP 65 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWFDNY 108 ++SL+DAR+ + +KL G DP+ + T W +++ Sbjct: 66 TISLQDAREKRDNAKKLLVKGIDPKAEQRAAKAEEKGAFTFETIGRQWVESH 117 >UniRef50_Q0BEM8 Phage integrase family protein n=4 Tax=Burkholderia ambifaria RepID=Q0BEM8_BURCM Length = 414 Score = 122 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D K+R K + P ++ D +GL + + P G ++Y+YR GK N +G YP+ Sbjct: 1 MPLTDIKIR--QAKAGNKPTKLTDGNGLYLLVKPSGSKLWRYKYRIAGKENVFAIGEYPT 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWFDNYVSTT 112 SL+ AR D R+L G P +E + + T D W + T Sbjct: 59 TSLQAARVARDDARELVKKGLHPSHARQEVLSARINEGKATFRAVSDEWLEKKRKTW 115 >UniRef50_B0C8U1 Phage integrase family protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8U1_ACAM1 Length = 399 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 7/115 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D ++R KP +G ++D GL ++I+P G ++YRYR GK + +G YP L Sbjct: 6 LTDLQVRN--AKPKTGSYRLSDGGGLFLQITPAGGKHWKYRYRIQGKESTFSIGSYPELG 63 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWFDNYVSTT 112 L +AR + R+L G +P T + ++ T D WF + Sbjct: 64 LGEARAKHLEARRLVAQGLNPTTEAKRLQLSLQLAQGNTFEFVADEWFSQKNAGW 118 >UniRef50_C5V4I9 Integrase family protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4I9_9PROT Length = 410 Score = 121 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 15/126 (11%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+++ ++ KP P +++D GL + + G ++ YR+ K L LG YP Sbjct: 1 MALTELAVKN--AKPKDKPYKLSDGGGLFLLVQINGGKYWRLAYRFADKQKTLALGIYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDY--------WFDN 107 +SL DAR+ RKL + TDP +E + + W + Sbjct: 59 ISLADARERREQARKLLANDTDPSAIKKETKRILQTATVNSFSALAKELHKVKAPMWTEG 118 Query: 108 YVSTTL 113 + + Sbjct: 119 HAKQWM 124 >UniRef50_B5F474 Integrase n=26 Tax=Proteobacteria RepID=B5F474_SALA4 Length = 449 Score = 121 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRW--HGKPNRLGLGRY 58 M ++ ++ KP ++AD GL + +SPKG ++ +YR K +RL G Y Sbjct: 30 MKLNARQIE--TAKPKEKAYKMADGGGLYLEVSPKGSKYWRMKYRRPSDKKEDRLAFGVY 87 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWFDN 107 P+++L +AR +KL G DP+ + ++E + W + Sbjct: 88 PTITLAEARAKRDAAKKLLSQGIDPKVEQKGAQAEIEGAYLFETIARQWHAS 139 >UniRef50_A3UDD1 Symbiosis island integrase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UDD1_9RHOB Length = 406 Score = 121 bits (304), Expect = 7e-27, Method: Composition-based stats. Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 7/113 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D K+R + KP V+D++GLS+ ++PKG +++RYR++GK +GLGRYPS Sbjct: 1 MPLTDAKIRAL--KPADTLYRVSDSNGLSIEVTPKGDRYWRFRYRFNGKAQMMGLGRYPS 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNY 108 +SLK AR R+L G +P + + + + + Sbjct: 59 VSLKKARSKRDHYRELLDEGLNPSLERQTRQQELAQLEQSSFGSIATEFLRKR 111 >UniRef50_C1D8D2 CP4 integrase protein n=12 Tax=Proteobacteria RepID=C1D8D2_LARHH Length = 452 Score = 121 bits (304), Expect = 8e-27, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 23/133 (17%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS- 60 ++ ++ + KP P + +D GL + I+P G ++ YR +GK L +G Y Sbjct: 6 PLTQLAIKNL--KPQDKPYKKSDGGGLYLLINPNGSKYWRMNYRINGKQKTLAIGVYCQF 63 Query: 61 ---------------LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQC 100 +SL DAR R + G DP +E + + + A Sbjct: 64 ALVDDKGKARAEQVIMSLADARLHCDAARAMLAKGIDPFETKQEAKKAANGLSPGSFAYV 123 Query: 101 LDYWFDNYVSTTL 113 W + + Sbjct: 124 AREWHAKMANKWV 136 >UniRef50_B4X5T7 Site-specific recombinase, phage integrase family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X5T7_9GAMM Length = 398 Score = 121 bits (304), Expect = 8e-27, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 7/117 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +SD K+R KP ++D +G+ + ISPKG ++++YR++GK RL LG YPS Sbjct: 5 KLSDVKIRA--AKPQDKLYSISDGEGMFLEISPKGGKWWRFKYRFNGKQKRLSLGTYPST 62 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVSTTL 113 SLK AR R+L SG DP + + + T A + W N V + Sbjct: 63 SLKAARDKRQQARELLASGVDPAQQRKTEKLATETALRNTFAGVAEEWAQNKVRSEK 119 >UniRef50_C7SIL5 Integrase B n=113 Tax=Gammaproteobacteria RepID=C7SIL5_ECOLX Length = 420 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 7/114 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++D K+RT+ KP P +V+D+ GL + + P G + +YR +GK +R+ LG YP+ Sbjct: 1 MSLTDAKIRTL--KPSDKPFKVSDSHGLYLLVKPGGSRHWYLKYRINGKESRIALGAYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMT----VAQCLDYWFDNYVS 110 +SL DARQ +RK+ +P + S T W + Sbjct: 59 VSLSDARQQREGVRKMLALNINPVQQRAAE-RGSRTPDKVFKNVALAWHKSNRK 111 >UniRef50_B6WTC3 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTC3_9DELT Length = 269 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 6/116 (5%) Query: 1 MA-ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 MA +++ K++ I KP D+ GL +++SP G ++++YR K + LG +P Sbjct: 1 MAQLTELKIKAI--KPSEKMARYYDSGGLYLQVSPTGGKYWRFKYRVEKKEKLVALGTWP 58 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENS---MTVAQCLDYWFDNYVSTT 112 +SLK+AR+ R+ +G DP + + E + T + + W +N + Sbjct: 59 QVSLKEAREKRDQCRQEIAAGNDPMLLKKARAEAACPGRTFQEVAEAWRNNMENVW 114 >UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IGA6_BORPD Length = 657 Score = 120 bits (301), Expect = 1e-26, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 8/120 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD +R K + D D LS+ +S G + +RY W GK R+ LG YP+ Sbjct: 15 MALSDLIVR--QAKTTGKRYTLYDNDCLSLMVSAAGGKSWMFRYSWLGKQKRMALGGYPA 72 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWFDNYVSTTLRE 115 LSL++AR + L G DP+ +++ + T D W + + L+E Sbjct: 73 LSLREARAERDKAQALIARGIDPQIERDQRRHAAKLAGEYTFKNVFDAWVE-HRRKELKE 131 >UniRef50_P08320 Integrase n=31 Tax=root RepID=VINT_BPP4 Length = 439 Score = 120 bits (301), Expect = 1e-26, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 7/115 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRW--HGKPNRLGLGRY 58 M ++ ++ KP ++AD GL + +S KG ++ +YR K +RL G + Sbjct: 5 MKLNARQVE--TAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVW 62 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWFDNYVS 110 P+++L AR + +KL G DP+ +E + T W + Sbjct: 63 PTVTLAQARAKRDEAKKLLVQGIDPKVVQKEARAENSGAYTFEAIAREWHASNKR 117 >UniRef50_Q48NQ4 Prophage PSPPH01, site-specific recombinase, phage integrase family n=2 Tax=Pseudomonas RepID=Q48NQ4_PSE14 Length = 391 Score = 120 bits (301), Expect = 1e-26, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 7/120 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K+R KP ++ D+ GL + ++ G ++YR+R GK N +G YP Sbjct: 1 MALTDLKIR--QAKPGKTSSKLTDSGGLYLEVTTGGSKLWRYRFRLAGKENTYAIGAYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVSTTLRE 115 +SL DAR R L SG +P + + T W + ++ ++ Sbjct: 59 VSLSDARTERDAARDLVKSGRNPAHVRQTEKAQQLTENRNTFKIVSQEWIEKRLAQRTQK 118 >UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio RepID=B8J055_DESDA Length = 402 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 4/113 (3%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +++ K+R I KP + D +GL + S G ++ +YR +GK RL G +P + Sbjct: 6 KLTEIKIRNI--KPNGKIERFVDGEGLYLETSVAGGKHWRMKYRVNGKEKRLSFGPWPDI 63 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKV--ENSMTVAQCLDYWFDNYVSTT 112 SLK+AR++ + ++ DP ++ + + T + ++ S Sbjct: 64 SLKEAREMRDEAKRQLRESLDPSAEKKKAKQEQAAPTFRDIALEYVEHQRSVW 116 >UniRef50_Q3JN19 Prophage CP4-like integrase n=62 Tax=Proteobacteria RepID=Q3JN19_BURP1 Length = 462 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 7/115 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD +R KP P ++ D DG+ + + P G ++ YR+ GK L LG YP Sbjct: 58 MNLSDLAVRN--AKPQDKPYKLTDGDGMFLLVQPNGGKYWRLAYRYLGKQKTLALGVYPE 115 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYWFDNYVS 110 +SL ARQ A+ R+ G DP + ++ + W + Sbjct: 116 VSLALARQRRAEAREQLAKGADPGETKKADRRAARLAADNSFEVVALAWLEERRP 170 >UniRef50_P37317 Integrase n=42 Tax=root RepID=VINT_BPSFV Length = 385 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 3/110 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++ ++ KP P + D +GL + + G +Q RY+ GK L +G+YP ++ Sbjct: 2 LTVKQIEA--AKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMT 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTT 112 L++AR RK G DP + N+ + + W+D+ Sbjct: 60 LQEARDKAWTARKDISVGIDPVKAKKA-SSNNNSFSAIYKEWYDHKKQVW 108 >UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomonas RepID=A5W5R9_PSEP1 Length = 393 Score = 119 bits (299), Expect = 2e-26, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 7/114 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT R KP +AD+ GL++ ++ GV + +R+ W GK R+ LG YP Sbjct: 1 MALTDTAAR--QAKPREKGYTLADSLGLTLYVAETGVKSWHFRFTWLGKQARISLGTYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYV 109 + LK+AR + R+ G DPR EK T + + W + Sbjct: 59 IGLKEARARRDEAREDVAQGKDPRESRREKKVERLGAKERTFRRVYEEWLEFRK 112 >UniRef50_B1JDS4 Integrase family protein n=3 Tax=Pseudomonadaceae RepID=B1JDS4_PSEPW Length = 402 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 6/116 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT +R +P +ADA GL + ++ G ++ RYR+ GK LGLG YPS Sbjct: 1 MALTDTAIR--TARPRDKLYRIADAQGLCLEVTTAGGKLWRLRYRFEGKAKMLGLGTYPS 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTY----FEEKVENSMTVAQCLDYWFDNYVSTT 112 ++L AR+ RKL G DP Y ++T+ W+D Sbjct: 59 VTLAHARERRDAARKLLSQGIDPSAYKQQEKAAAEAQALTLETLAREWYDYNQPRW 114 >UniRef50_C1M393 Bacteriophage integrase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M393_9ENTR Length = 420 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 5/115 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D ++ + P +AD+ GL + IS G + +R+R++GK NR+ G YP Sbjct: 1 MPLNDHIIQNAISQ--EKPYRLADSLGLYLVISNSGSRLWYFRFRFNGKQNRIAFGPYPQ 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS---MTVAQCLDYWFDNYVSTT 112 +++ DAR+ RKL SG P + + + S T W + ++ Sbjct: 59 ITIADARRKRDAARKLLTSGISPSEHRKSEKAASSKTRTFQHIALAWHSSCLNRW 113 >UniRef50_UPI00016B13C2 phage integrase family protein n=1 Tax=Burkholderia pseudomallei BCC215 RepID=UPI00016B13C2 Length = 324 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 5/106 (4%) Query: 12 YGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITA 71 K + P ++ D +G+ + + P G ++ YR+ GK L LG YP+++L AR+ Sbjct: 3 NAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVTLATARKKRD 62 Query: 72 DLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYWFDNYVSTT 112 + R+ +G DP + ++ + + WFD+ Sbjct: 63 EAREQIAAGIDPGEAKKEARRAAEIAAANSFEAVAREWFDSQRPGW 108 >UniRef50_Q3SHC8 Probable cp4-like integrase protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHC8_THIDA Length = 425 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 8/115 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 A++DT ++ KP P ++AD GL + ++ G ++ YR+ GK L LG Y + Sbjct: 18 ALTDTAVKK--AKPGDKPYKMADEKGLYLLVNQAG-KYWRMDYRFLGKRKTLALGVYSDV 74 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNYVST 111 SL ARQ D R + GTDP +E + + W + Sbjct: 75 SLARARQKRDDARAMLADGTDPGEQRKETKRANQAAQANSFEAVAREWHAMKLKR 129 >UniRef50_C8T7N5 Phage integrase family site-specific recombinase (Fragment) n=11 Tax=Enterobacteriaceae RepID=C8T7N5_KLEPR Length = 188 Score = 119 bits (298), Expect = 3e-26, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 7/114 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++D K+RT+ KP P +V+D+ GL + + P G + +YR +GK +R+ LG YP+ Sbjct: 1 MSLTDAKIRTL--KPSDKPFKVSDSHGLYLLVKPGGSRHWYLKYRINGKESRIALGAYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMT----VAQCLDYWFDNYVS 110 +SL DARQ +RK+ +P + S T W + Sbjct: 59 VSLSDARQQREGVRKMLALNINPVQQRAAE-RGSRTPDKVFKNVALAWHKSNRK 111 >UniRef50_D0KY10 Integrase family protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KY10_HALNC Length = 427 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 26/139 (18%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT ++ + KP S P +V D GL + ++P G ++ YR+ GK L LG YP Sbjct: 1 MALTDTAIKAL--KPESKPYKVTDEKGLYLFVTPAGGKLWRLDYRFEGKRKTLALGGYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV------------------------ENSMT 96 ++LK AR + R+L +GTDP + + + Sbjct: 59 VNLKQARVYRDEARQLIANGTDPAELRKAEKTTITESRREEAEAVKIEAMIQAGEALPGS 118 Query: 97 VAQCLDYWFDNYVSTTLRE 115 + D W + Y++ + Sbjct: 119 FEEIGDEWVNMYLADKSEK 137 >UniRef50_A5EQ25 P4-like integrase n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EQ25_BRASB Length = 407 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 7/114 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DTK R K ++++D GL + I+P G ++ YRWHGK L LG YP+ Sbjct: 1 MPLTDTKCRN--AKGQIKSRKLSDGGGLHLLITPDGAKYWRLAYRWHGKQRTLALGVYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYV 109 + L +AR D ++ + DP E+ + T W +N+ Sbjct: 59 VGLIEARASRDDAKRSIAADIDPSIVKRERKRAAKIATGNTFEAVAREWHENWK 112 >UniRef50_UPI0000E0FEDC DNA integration/recombination/inversion protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FEDC Length = 418 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 6/115 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT ++ KP + +++D+ GL + I P G ++Y +R + +G+YP Sbjct: 1 MALTDTAIKN--AKPKTKAYKMSDSGGLFLLIKPSGYKSWKYDFRINSTRGSYTIGKYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 +SLK ARQ R+L G +P+ ++ N + F Y++ L + Sbjct: 59 ISLKQARQEHLQARELVAQGINPKQIKTQRKVN----DELQTKRFSYYMNQWLNK 109 >UniRef50_A3M8S0 Putative integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M8S0_ACIBT Length = 433 Score = 118 bits (296), Expect = 5e-26, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 7/113 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG--KPNRLGLGRYP 59 ++DTK ++ KP AD GL +R+ P G + +RY G K ++ LG YP Sbjct: 7 PLTDTKCASL--KPKDKEYVEADGGGLYLRVRPTGAKSWIFRYTNRGNDKREKITLGPYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWFDNYV 109 +LSL AR+ + ++ G DP+ K N T+ + W D Y Sbjct: 65 ALSLAKAREKKHEFLRMIAEGVDPKEQLSILLAKKNNVNTLENVVRVWLDAYA 117 >UniRef50_Q0C1T8 Site-specific recombinase, phage integrase family n=2 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C1T8_HYPNA Length = 409 Score = 117 bits (295), Expect = 8e-26, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 7/118 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D K+R++ KP P+ D L + + P G +++ Y++ GK + LG YP Sbjct: 15 MPLTDLKIRSL--KPDGKPRRYTDGGNLFIEVRPNGSKLWRFAYKFDGKQKLMALGTYPE 72 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYWFDNYVSTTL 113 +SL AR+ A+ R L G DP + + T + D L Sbjct: 73 ISLARAREKRAEARALLIEGIDPMQQAKVNKLERQALTEHTFSAIAAELLDKNRREGL 130 >UniRef50_A6SWC6 Prophage integrase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWC6_JANMA Length = 414 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 9/118 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPN--RLGLGRYP 59 ++D +++ KP P ++AD +G+ + I P G ++ YR + RL G YP Sbjct: 7 PLTDLRIKA--AKPKEKPYQLADGEGMYLEILPSGSKVWRMAYRQENRTTSTRLTFGHYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTT 112 ++ L +AR+ AD +K G DP + + T W N + Sbjct: 65 AVGLAEARRKRADTKKQIVEGVDPAQARRVEKAISATAAANTFEAVARMWHQNKLEQW 122 >UniRef50_B3A9A3 Prophage integrase n=2 Tax=Escherichia coli O157:H7 RepID=B3A9A3_ECO57 Length = 412 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 9/121 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH--GKPNRLGLGRYP 59 ++ T+++ + KP V D GL + +S G +++RY K +GR+P Sbjct: 5 PLTVTEVKGM--KPREKDYAVYDGFGLLLNVSKAGGKVWRFRYSHPITKKRQTYTIGRFP 62 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTTLR 114 SL +AR++ +LR++ G DP T + + +N T + WF + LR Sbjct: 63 EFSLAEAREVRDELRRMIARGVDPVTEKKNRKIEMSLKNLQTFEAVANAWFAFKKGSELR 122 Query: 115 E 115 + Sbjct: 123 K 123 >UniRef50_B0RRY6 Complete genome, strain B100 n=3 Tax=Proteobacteria RepID=B0RRY6_XANCB Length = 409 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 9/119 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRY 58 M ++DT +R KP + PQ++ D +GL + + P G ++Y YR GK N L G Y Sbjct: 1 MPLTDTAIR--RAKPAATPQKLRDGNGLYLLLRPDGARWWRYDYRRPVTGKRNTLSFGTY 58 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYWFDNYVSTT 112 P +SL DAR+ A+ R+L + DP + + + + WF Sbjct: 59 PEVSLADARERLAEARRLVAAKIDPGEQRKAVKAAGEAAAANSFEVVAREWFAKQQKEW 117 >UniRef50_B5F8X4 Integrase n=1 Tax=Salmonella enterica subsp. enterica serovar Agona str. SL483 RepID=B5F8X4_SALA4 Length = 120 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K+R + K P +V D+ GL + + P G + RYR+ GK R+ G YP+ Sbjct: 1 MALTDPKIRAL--KSLDKPYKVIDSGGLYILVKPGGAKHWYLRYRFGGKETRIAFGVYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS---MTVAQCLDYWFDNYVSTTL 113 ++L AR+ ++R++ P + + T+ N + + Sbjct: 59 VTLAAAREKREEVRRMLAENVHPALQRVAEKVAADPSRTLQHIASELHQNILPGHI 114 >UniRef50_Q2NQD5 Putative phage integrase n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NQD5_SODGM Length = 332 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 3/115 (2%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +SD KLR + G P + AD GLSVR+S G I + + YR G R+ LGRYP + Sbjct: 19 KLSDKKLRNLLGVPRDKYEFFADGAGLSVRVSTVGGISWTFTYRNSGTIQRVTLGRYPDM 78 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWFDNYVSTTL 113 SLK AR+ + R G DPR + + S+ TV + ++YW +Y Sbjct: 79 SLKRAREKRDECRTWLSEGKDPRRQLKLIKQESLKPVTVREAIEYWIKHYAMDNR 133 >UniRef50_A1VQL7 Phage integrase family protein n=2 Tax=Burkholderiales RepID=A1VQL7_POLNA Length = 413 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 14/127 (11%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D + + D G+ + ++ G ++ YR+ GK L LG YP+ Sbjct: 1 MPLTDIFTKNTKHSGAPAGDKHTDGGGMYLLVTKAG-KYWRMNYRFAGKRKTLALGVYPA 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDY--------WFDN 107 +SL +ARQ RKL DP +E + + T W + Sbjct: 60 VSLAEARQGRDKARKLLAQDIDPSAAKQEDRQATATAAANTFEAVAREFHALKAGGWSEG 119 Query: 108 YVSTTLR 114 + + LR Sbjct: 120 HATKWLR 126 >UniRef50_A4JAY4 Phage integrase family protein n=22 Tax=Bacteria RepID=A4JAY4_BURVG Length = 405 Score = 115 bits (289), Expect = 3e-25, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 6/116 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++D K R G ++ D GL + + G +++ +YR++GK N L G YP+ Sbjct: 5 PLTDAKCRNARFDEAGGN-KLFDGGGLYLDLRSSGSKKWRLKYRFNGKENLLTFGDYPAT 63 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNYVSTT 112 SL DAR + ++L G +P + + + T W++ +T Sbjct: 64 SLADARSRRDEAKRLLAEGKNPAFERDVEKQTRAIAAQNTFEAVALEWYEAQQATW 119 >UniRef50_C0VMW7 Phage integrase n=2 Tax=Acinetobacter RepID=C0VMW7_9GAMM Length = 419 Score = 115 bits (289), Expect = 3e-25, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 5/114 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD ++R I KP + AD GL + ++P G ++ +YR++G+ + L +G YP +S Sbjct: 22 LSDAQVRKI--KPLEKKKRYADEKGLYLEVTPSGGRFWRLKYRFNGRESTLTIGSYPEIS 79 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWFDNYVSTTL 113 L AR+ + R +S DP ++++ S+ W ++ + Sbjct: 80 LAQARRARDEARIQLYSNIDPNAVKNQRLQQTDESILFKSLAMEWMEDRKAVIK 133 >UniRef50_A1WLK0 Phage integrase family protein n=4 Tax=Burkholderiales RepID=A1WLK0_VEREI Length = 421 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 5/115 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D + ++DA GL + +SP G ++ ++YR+ G+ RL LG YP + Sbjct: 2 LTDKHCKNALCPADKQRVRLSDAAGLYLEVSPSGSKRWFWKYRFDGREKRLALGVYPDVP 61 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWFDNYVSTT 112 LKDAR D RK + G DP + + ++ T + + Sbjct: 62 LKDARTARDDARKQHQRGVDPVLERQLERLSNRSDPEATFEVVAREFHTTKKRSW 116 >UniRef50_Q5P707 Phage-related integrase n=2 Tax=Proteobacteria RepID=Q5P707_AZOSE Length = 415 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D K R + K VAD+ GL + + P G ++YR+R K N LG YP++ Sbjct: 2 LTDAKCRAV--KATDKTYRVADSHGLCLEVRPSGAKFWRYRFRLADKQNMHALGEYPAMG 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWFDNYVSTT 112 L+DAR+ + R+L G +P + + + T W + Sbjct: 60 LQDARRARDEARELVRKGINPSHHRGLEKAERILALGSTFETVTAEWIERNRPDW 114 >UniRef50_Q6LJV6 Hypothetical site-specific recombinase, phageintegrase family n=3 Tax=Photobacterium profundum RepID=Q6LJV6_PHOPR Length = 424 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 3/115 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DT L+ + K + D DGL +R+S +G I F RYR GK + + LG YP LS Sbjct: 13 LNDTTLKKMLKKSREKLARLPDRDGLYIRVSTRGKIVFYIRYRIGGKQDSMDLGEYPLLS 72 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWFDNYVSTTLR 114 LK+AR + R L G +P+ + + ++T+ W++ T++ Sbjct: 73 LKEARNRNEEYRALLQDGHNPKVEKRLRQKKISDAVTLKDLFYLWYEKECKVTIK 127 >UniRef50_D0CDZ4 DNA integration/recombination/inversion protein n=4 Tax=Acinetobacter RepID=D0CDZ4_ACIBA Length = 402 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYP 59 +S +++ P + +++D L +RI G + + Y + GK N L LG YP Sbjct: 8 KLSALQVKKAKPDP-NKMYKLSDGGNLYLRIDQSGSKYWIFNYTRPFLGKRNDLSLGTYP 66 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNY 108 +SL+DAR I +KL G DP +++ E T + W Sbjct: 67 EVSLEDARTIRDKYKKLIKQGIDPAMERIETKSQKQKEAENTFRVIAELWLHKR 120 >UniRef50_C0Z3X8 Integrase (Fragment) n=8 Tax=Enterobacteriaceae RepID=C0Z3X8_ECOLX Length = 106 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 106/106 (100%), Positives = 106/106 (100%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS Sbjct: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD 106 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD Sbjct: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFD 106 >UniRef50_A1W8P6 Phage integrase family protein n=4 Tax=Comamonadaceae RepID=A1W8P6_ACISJ Length = 413 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 5/115 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D + + P D+ GL + +SP G ++ ++ + GK R+ LG YP+ S Sbjct: 2 LTDKQCKNAICPPDKKRARFTDSLGLYLEVSPSGSKRWFWKTYFDGKEGRMALGSYPTQS 61 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWFDNYVSTT 112 L DAR+ + G DP + + T W V Sbjct: 62 LADARKARDIAKLKKADGVDPVQERKLEKLKGSRSGGDTFQAIALEWHGRQVDQW 116 >UniRef50_Q167M4 CP4-like integrase, putative n=40 Tax=Alphaproteobacteria RepID=Q167M4_ROSDO Length = 409 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 7/120 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD K+R + K +VAD D L V + P G +Q +YR G+ L +G YP+ Sbjct: 15 MPLSDAKIRNL--KARDKQYKVADFDSLYVLVKPNGSKLWQMKYRLDGREKTLSIGAYPA 72 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNYVSTTLRE 115 +SL+ AR+ R + +G DP +E+ + T + + D + Sbjct: 73 VSLQQARKSRDAARSMIANGEDPSEEKQEQKRLKREASGQTFEKIGGMFLDKQRKEGKSK 132 >UniRef50_A6VC70 Integrase n=11 Tax=Proteobacteria RepID=A6VC70_PSEA7 Length = 395 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 9/120 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D R KP + D GL + + P GV ++YR++ GK + LG YPS+S Sbjct: 2 LTDAHCRA--AKPKEQLYRLNDFRGLYLEVKPNGVKAWRYRFKLAGKGSWFALGDYPSVS 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYW--FDNYVSTTLRE 115 L DAR + RKL G +P + + +++ T W ++ T R Sbjct: 60 LADARDKCEEARKLVKQGINPVQNRQVERIKREQDSANTFEAVAKEWLALKDWEEVTKRR 119 >UniRef50_C8R2J0 Integrase family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2J0_9DELT Length = 420 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 9/119 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGK----PNRLGLG 56 M ++D ++R + K + + D GL + ++P G ++++YR+ G+ RL LG Sbjct: 1 MTLTDAQVRNV--KAEDKTRRLFDGGGLYLEVAPSGGKWWRFKYRFPGQGKIQEKRLSLG 58 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKV---ENSMTVAQCLDYWFDNYVSTT 112 YP + LK+AR ++R+ G DP + + W N + Sbjct: 59 TYPGVGLKEARAKRDEMRRQIAQGIDPANLRRSTRGSGALAGSFEAVARLWHRNNSTDW 117 >UniRef50_C7I2C4 Putative integrase n=1 Tax=Thiomonas intermedia K12 RepID=C7I2C4_THIIN Length = 229 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 7/115 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT +R KP + ++ D GL + I+P G ++ +Y + GK RL G YP Sbjct: 1 MPLTDTTIRN--AKPGAKSIKLFDERGLYLEITPPGGKLWRLKYSFGGKEKRLSFGAYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNYVS 110 +SLK AR+ D R++ G DP + + W +++ Sbjct: 59 VSLKAAREKRDDARRMLADGIDPSEARKAAKARALQMAEDSFEAIAMEWAKRHLA 113 >UniRef50_A5EXV7 Integrase A2 n=6 Tax=Cardiobacteriaceae RepID=A5EXV7_DICNV Length = 401 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D ++T KP G + D DGLS++I+ +G + +RY +G+ + LGRYP+ Sbjct: 10 MRLTDKIIQTAK-KPSRGYLRLTDGDGLSLKITDRGSYFWNFRYYINGRERNMSLGRYPA 68 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE--------EKVENSMTVAQCLDYWFDNYVSTT 112 +S++ AR +LR G DP + E+ T W+ Sbjct: 69 MSIEAARGEALELRYHLRQGLDPLAERKKKQAAYLAEEKTQKETFEFVAREWYQLKRPEW 128 Query: 113 LRE 115 E Sbjct: 129 KNE 131 >UniRef50_A1BGX1 Phage integrase family protein n=25 Tax=root RepID=A1BGX1_CHLPD Length = 419 Score = 114 bits (286), Expect = 8e-25, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 7/116 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +SD ++ KP +++D GL + ++ G ++++YR+ GK L LG+YP + Sbjct: 7 PLSDAQVSK--AKPAEKDYKLSDGGGLHLLVTTSGGKLWRFQYRFDGKQKLLALGQYPEI 64 Query: 62 SLKDARQITADLRKLYFSGTDPR-----TYFEEKVENSMTVAQCLDYWFDNYVSTT 112 SL +AR+ + R L + DP E ++++ + WF Sbjct: 65 SLANARKRREEARTLLANEQDPSEAKKAAKKAEALKDASSFELVAREWFGKNDPVW 120 >UniRef50_A3ZAX6 Prophage CP4-like integrase n=2 Tax=Synechococcus RepID=A3ZAX6_9SYNE Length = 426 Score = 114 bits (286), Expect = 8e-25, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 5/115 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD ++ + P + D DGL + ++ G ++ YRW G +G YP++ Sbjct: 2 LSDKAIQALRPDPDRPGTKHHDRDGLYLWVARSGSKTWRKDYRWQGARRTFTIGPYPAVR 61 Query: 63 LKDARQITADLRKLYFSGTDPR-----TYFEEKVENSMTVAQCLDYWFDNYVSTT 112 L DAR+ +L +G DPR + +S Q WF+++ ++ Sbjct: 62 LADARKQALELNTWIKAGIDPRTQVPTQQRNQAESSSRPFVQIAQAWFEHHSASW 116 >UniRef50_D2LIX3 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LIX3_RHOVA Length = 392 Score = 114 bits (286), Expect = 8e-25, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD K+R KP +++DADGL + + P G ++ YR GK L +G+YP Sbjct: 1 MALSDLKIR--TTKPTERDFKLSDADGLYLLVRPNGSKLWRLNYRHLGKNKTLAIGKYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEK-----VENSMTVAQCLDYWFDNYVST 111 ++L AR A+ R+L G DP + + V + T + + + Sbjct: 59 IALSTARDKRAEARRLLAEGVDPSYRKQVEVAKAKVAAANTFEAVAEEYLASLARD 114 >UniRef50_C8KXV2 Prophage CP4-57-like integrase n=1 Tax=Actinobacillus minor 202 RepID=C8KXV2_9PAST Length = 406 Score = 114 bits (286), Expect = 9e-25, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 10/121 (8%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYP 59 + DT+++ KP P + D GL + +SP G +++ Y K ++ LG YP Sbjct: 7 PLVDTEIKK--AKPEDKPYTMTDGQGLFLIVSPTGSKSWRFNYYRPISKKRAKIALGMYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQ-----CLDYWFDNYVSTTLR 114 +++L AR + + + L +G DP+ + ++ + Q + W T ++ Sbjct: 65 AITLSKARALRDEYKHLLANGIDPQEHCKQLELQKLQFKQNTLFAIAEKW-KQKKETEVK 123 Query: 115 E 115 E Sbjct: 124 E 124 >UniRef50_C4GIW0 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIW0_9NEIS Length = 394 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 6/116 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D + + P G ++++D GL ++I KG ++ +Y ++ K + LG YP+ Sbjct: 1 MKLTDNQCK-HTPPPDKGVKQLSDGGGLYLQIDAKGRRYWRIKYTYNQKQHTQHLGIYPA 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVST 111 + LK AR ++ L G +P+T+ E++ T W Sbjct: 60 MPLKAARMERDKIKLLLSQGINPKTHQEQQQRAEQKRITNTFEHVARKWHTTKAEK 115 >UniRef50_B9Z434 Integrase family protein n=2 Tax=Neisseriaceae RepID=B9Z434_9NEIS Length = 395 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 8/110 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR-WHGKPNRLGLGRYP 59 M +SD K+R KP P ++ D GL + I P G ++YRY K +G YP Sbjct: 1 MPLSDVKIR--TSKPLDKPYKLQDGKGLYLEIRPTGAKFWRYRYWTSPTKDGIYTIGEYP 58 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYW 104 +SL +AR +R L G +P + + E + T+A + W Sbjct: 59 DVSLAEARAERERVRALVKEGKNPTAEKKLDKLRSQKETATTLAVVAEEW 108 >UniRef50_UPI00016B0CE6 putative integrase n=1 Tax=Burkholderia pseudomallei NCTC 13177 RepID=UPI00016B0CE6 Length = 162 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 2/92 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT ++ + KP P+++ D GL + ++P ++ +YR+ GK L G YP Sbjct: 1 MALTDTAIK--HAKPAEKPRKLFDGSGLYLLLTPDQGKYWRLKYRFGGKEKSLSFGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE 92 ++L AR + + R L G DP +E+ Sbjct: 59 VTLAAARNLRDEARALLAEGVDPSEVRKEERA 90 >UniRef50_B9MGW9 Integrase family protein n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MGW9_DIAST Length = 428 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 20/130 (15%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQ-FQYRYRWHGKPNRLGLGRYP 59 MA+SDT +R++ KP +++ D +GL + + G +++ Y+ GK + LG YP Sbjct: 4 MALSDTTIRSV--KPGDPRRQLTDGNGLYLLLYVNGGKHGWRFDYKVQGKRKTISLGTYP 61 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----------------TVAQCLD 102 + SL AR R+L +G DP + K T Sbjct: 62 ATSLSLARAKANAARELVAAGIDPSADRKSKKAAEKKVHEDAKLVAAGKPLNGTFEAVAR 121 Query: 103 YWFDNYVSTT 112 WF+ Sbjct: 122 EWFEVRSPEW 131 >UniRef50_D1B120 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B120_SULD5 Length = 419 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 18/122 (14%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY-RWHGKPNRLGLGRYPS 60 ++DT+L+ K + D GL + + P G ++ Y R +G N + LG YP+ Sbjct: 7 PLTDTELKK--SKIQEKTYRLTDGAGLYLLVEPNGSKGWRLDYTRPNGGRNTISLGTYPT 64 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE---------------EKVENSMTVAQCLDYWF 105 ++L +AR+ +L+K G DP + E+ T + +F Sbjct: 65 ITLCEAREKRDELKKQIKKGVDPSLERKGVKELQREEKEADHAEEERKQNTFEKVARDFF 124 Query: 106 DN 107 ++ Sbjct: 125 ES 126 >UniRef50_A1WW57 Phage integrase family protein n=4 Tax=Proteobacteria RepID=A1WW57_HALHL Length = 412 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 15/129 (11%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH-GKPNRLGLGRYPS 60 ++D + RT ++ D GL + + G Q+Q+RYR G+ +GLG YP Sbjct: 7 KLTDRQCRTAKPPEGKQQLKLTDGGGLVLLVKSNGGKQWQFRYRRPSGREATMGLGVYPD 66 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFD--------- 106 + L AR+ + R L G DP + + + + W+D Sbjct: 67 VPLSKARERRDEARALLADGIDPIDQRKAQRSAAASADTHSFEAVAREWWDAVHRHKVVA 126 Query: 107 NYVSTTLRE 115 ++ + LR Sbjct: 127 SHANRNLRR 135 >UniRef50_B0QT04 Prophage CP4-57-like integrase n=1 Tax=Haemophilus parasuis 29755 RepID=B0QT04_HAEPR Length = 304 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 11/116 (9%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH----GKPNRLGLGR 57 +++T++ KP + D GL +R+ G + + Y K LG+G Sbjct: 7 PLTNTEVEK--AKPKDKDYSLMDGQGLFLRVKANGKKFWLFNYYKPFSTPPKRTNLGIGA 64 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYWFDNY 108 YP +SL AR I + R L DP+ + + E + T W + Sbjct: 65 YPEISLAQARLIRDEWRALLAKNIDPKVHRQNIVDEEISKRENTFEAVAKKWREKK 120 >UniRef50_C8NCE3 Phage integrase family site-specific recombinase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCE3_9GAMM Length = 401 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 10/124 (8%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG--KPNRLGLGRY 58 MA+++T+ RT P ++ D GL ++++ G ++ YR G K + G Y Sbjct: 1 MALTETQCRTAAA-PDKNVRKYFDGGGLCLQVTSDGKKYWRLYYRMPGSKKQQTVSFGVY 59 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYV--ST 111 P +SLK ARQ +++ L G DP+ ++ ++ T A W ++ Sbjct: 60 PKVSLKQARQRRDEVKLLIARGIDPKLAAKQLRQDRTVALENTFADVAKRWLEHRAEVKK 119 Query: 112 TLRE 115 ++ Sbjct: 120 WGKQ 123 >UniRef50_C6RLT7 Phage integrase n=2 Tax=Acinetobacter radioresistens RepID=C6RLT7_ACIRA Length = 405 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 7/118 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D K++ + K VAD GL + + G ++YRYR+ P L +G YP +S Sbjct: 2 LNDLKIKQLKAK--DKMYRVADHAGLCLEVRTTGSKFWRYRYRYLNIPKMLTIGPYPEIS 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWFDNYVSTTLRE 115 L AR T + R + DP T ++ ++++M T + + + Y T +E Sbjct: 60 LSYARDKTREYRGMLAKNLDPVTEQKKALDSAMDAIQHTFKSISNEYLEKYKDTHSQE 117 >UniRef50_A6Q4N1 Site-specific recombinase, phage integrase family n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q4N1_NITSB Length = 412 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 8/119 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++D +LR KP ++ D +GL + I P G F+ Y + GK N +G YP + Sbjct: 7 PLNDLQLRN--AKPKEKNYKLRDGEGLYILIKPNGRKIFRLDYVYAGKRNTYTIGDYPQI 64 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQ-CLDYWFDNYVSTTLR 114 SL AR+I ++++L +G DP Y +E+ + ++ + + + Sbjct: 65 SLAQARKIKYEVKELIKNGIDPNRYKQEQKRIKELEANKKFTSFVIERFIQHKAKEVSK 123 >UniRef50_Q93UI5 Integrase-like gene 1 n=1 Tax=Escherichia coli RepID=Q93UI5_ECOLX Length = 401 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 10/117 (8%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D K+R++ P AD G+ ++I+ G ++ +YR GK L G YP Sbjct: 1 MPLTDLKVRSLT-----TPGRYADGGGMYLQITASGGRYWRMKYRHGGKEKLLAFGVYPL 55 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYWFDNYVSTT 112 + +K+AR ++ G DP + + + + T + W D+ Sbjct: 56 VGIKEARDKLFYAKQALSRGEDPGATKKLAKFQAEQDAANTFKAVAEDWLDHQAGRW 112 >UniRef50_A9VZC1 Integrase family protein n=3 Tax=Alphaproteobacteria RepID=A9VZC1_METEP Length = 412 Score = 112 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 5/113 (4%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 A++ ++R + P AD +GL + + P G ++ R G+ +GLG + Sbjct: 21 ALTTVQVRALKV-----PGRYADGNGLYLVVEPSGSKRWLLRTIVQGRRRDIGLGGAGLV 75 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 +L +AR+ RKL G DP + T A+ + + + ++ Sbjct: 76 TLAEAREKALAYRKLARDGGDPLAERRKARATVPTFAEAAEQVHEEHKASWKN 128 >UniRef50_UPI00019048C6 phage integrase n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019048C6 Length = 174 Score = 112 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 7/120 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D ++R K P ++ D GL + +S G ++ Y + GK L LG YP+ Sbjct: 1 MALTDVQIRN--AKKSEKPYKLPDGKGLYLYVSTAGGKSWRLDYAYFGKRKTLTLGAYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYWFDNYVSTTLRE 115 + L +AR + +K G DP + K T D + E Sbjct: 59 IGLAEARSRRDEAKKKLSEGLDPSLAKKREQLAAKAAAGNTFGLIADEFIAKLRRDKRAE 118 >UniRef50_UPI00016954D2 DNA integration/recombination/inversion protein n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=UPI00016954D2 Length = 252 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 7/119 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D +R +P S P + D GL + I+P G ++++YR+ GK RL LG YP Sbjct: 1 MPLNDLLIRK--AQPASKPVRLFDGGGLYLEIAPSGGKLWRWKYRFAGKEKRLALGPYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTTLR 114 +SL +AR+ A+ R++ SG DP + + + + Sbjct: 59 ISLAEARKRHAESRQVLKSGIDPGEQRKVQKLTRLAHADSSFGAITLELLTMRAKKNAK 117 >UniRef50_P76542 Putative prophage CPZ-55 integrase n=6 Tax=Enterobacteriaceae RepID=INTZ_ECOLI Length = 402 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 50/118 (42%), Gaps = 9/118 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADA--DGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 ++ + +P P ++ D+ GL + + P G +++RY + + +G YP Sbjct: 5 PLTAKAIDA--AQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAIGVYP 62 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNYVSTT 112 ++LK+AR+ + R L +G +P ++ + + + WF V Sbjct: 63 LITLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGW 120 >UniRef50_C6E138 Integrase family protein n=1 Tax=Geobacter sp. M21 RepID=C6E138_GEOSM Length = 433 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 5/116 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +DT +R + KP + ++ +G ++R+ P G + Y Y +GK +GLG YP ++ Sbjct: 8 FTDTMIRKL--KPDTNEYRKSEGNGFTIRVMPSGFKSWLYLYAINGKRRCMGLGHYPDVT 65 Query: 63 LKDARQITADLRKLYFSGTDP---RTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 L+ AR +K+ +G DP + +E+ ++TV Q D + + RE Sbjct: 66 LETARDRFEAAKKMVKNGMDPLDAKEEEQEQHRKALTVKQLFDDYLVRHAKLNKRE 121 >UniRef50_B4RZR6 Prophage CP4-like integrase n=2 Tax=Proteobacteria RepID=B4RZR6_ALTMD Length = 412 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D +++ + + D GL + + G ++ +YR+ GK L +G YP Sbjct: 1 MPLTDIQIKQAQA--STKDIWLTDEKGLRLLVKKNGSKYWRLKYRFQGKQKTLAIGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTT 112 +SLKDAR+ ++ R+ DP +EK W++ Sbjct: 59 VSLKDAREAVSEARRQLRDDIDPSAIKQEKKHLSSVSEIELFNTQARLWWNKQKGQW 115 >UniRef50_B7I7W7 Integrase n=4 Tax=Pseudomonadales RepID=B7I7W7_ACIB5 Length = 427 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 8/120 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRW-HGKPNRLGLGRYPS 60 +SDT L + P S D +GL R+ P G + +RY+ GK + LG+G YP Sbjct: 28 PLSDTVLANLE--PESKEYRELDGEGLYFRVKPDGKKAWLFRYKKADGKWSWLGIGTYPE 85 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWFDNYVSTTLRE 115 LS AR+ ++ K G +P +E+ + T W D +T +++ Sbjct: 86 LSGAGARKKAREIIKDISQGDNPIITKQERKRQELEQNNATFEVLAREWLDTKANTWVKD 145 >UniRef50_A1TYD6 Phage integrase family protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TYD6_MARAV Length = 412 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 6/117 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +++T ++ Y ++AD GL + I G ++ +YR+ GK L LG YP + Sbjct: 7 KLTETAVKHATFSKYGKRTKLADGAGLYLDIQKAG-RYWRLKYRYGGKEKLLALGVYPDV 65 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVSTTL 113 SLK+AR + ++L DP T+ + + + T W ++ + Sbjct: 66 SLKEARAKRDEAKRLLADNIDPVTHRQREKAERVEATATTFKGIALEWLEHVHKKNV 122 >UniRef50_B8L9U1 Phage integrase family protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9U1_9GAMM Length = 399 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D K+R KP P ++D GL + I P G ++Y YR K L +G Sbjct: 1 MALTDFKIRG--AKPAEKPYRLSDGGGLFLEIRPNGSKLWRYAYRLDSKQRLLAIGSLQD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVSTT 112 +SL DAR + G DP + S TVA+ + W+ + Sbjct: 59 VSLADARAAMRQAKSQVKLGQDPVLQRKIAKARSEESALNTVAENAEDWYSGAEKSW 115 >UniRef50_A5PCI3 Phage integrase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCI3_9SPHN Length = 325 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+S ++ K P ++AD DGL + +SP G ++ YR+ GK L GR+P+ Sbjct: 1 MALSAVAIKA--AKSRDKPYKLADRDGLYLEVSPTGARSWRMNYRYLGKQKTLTFGRWPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDN 107 + L DAR+ R++ G DP + + ++ + + + Sbjct: 59 VGLADARKKCDAAREVLARGDDPGEQAKLERIAASVASASSFEAVAEEYLAK 110 >UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepID=C9NQJ4_9VIBR Length = 415 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 9/117 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRW--HGKPNRLGLGRYP 59 ++ TK+++ KP + D DGL +RI P G + Y + K L LG+YP Sbjct: 7 KLTPTKIKS--SKPKDKEYNLFDGDGLRLRIKPNGSKHWILNYYRPSNRKRANLSLGKYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYWFDNYVST 111 LSL +AR++T + ++L G DP+ + +K + T WF+ Sbjct: 65 DLSLANARKMTLEAKELLAQGIDPQEERKRHQLEQKANHEHTFINVTTKWFEIKKDD 121 >UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria RepID=B2I529_XYLF2 Length = 410 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 5/118 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT L+ + KP VAD GLSV + P G I +++RYR G+ +L LG+YP+ Sbjct: 1 MPLTDTALKAL--KPRDRIYSVADERGLSVEVYPTGGIVWRFRYRLAGRYEKLTLGKYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV---ENSMTVAQCLDYWFDNYVSTTLRE 115 LSL++AR + L GT P + ++MTV + +F S ++ Sbjct: 59 LSLRNARLKRDEAASLVAMGTSPARQKQLAKVTAADAMTVRDFAERFFREIQSRDRKD 116 >UniRef50_A4VPC8 Site-specific recombinase, phage integrase family n=6 Tax=Proteobacteria RepID=A4VPC8_PSEU5 Length = 455 Score = 111 bits (279), Expect = 5e-24, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 17/122 (13%) Query: 1 MA---ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGR 57 M ++D K++++ KP +++D GL + + P G ++++YR GK N +G Sbjct: 53 MPENLLTDAKIKSV--KPTDRDWKLSDGGGLFLLVKPTGCKLWRWKYRLQGKENLFAIGS 110 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYFEE------------KVENSMTVAQCLDYWF 105 +P +SL +AR R L G P ++ K + A+ + Sbjct: 111 FPQVSLAEARTAREKARALVKQGIHPAHERQQVKQRNLEALAERKRARESSFAKVAQAYL 170 Query: 106 DN 107 Sbjct: 171 TE 172 >UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID=B2UB26_RALPJ Length = 415 Score = 111 bits (279), Expect = 5e-24, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 12/120 (10%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++ T++ KP P ++ D GL V + P G ++Y+Y GK + +G YP + Sbjct: 7 KLTPTRINN--AKPKEQPYKLTDGGGLFVLVHPGGSKAWRYQYMLSGKRRSVLIGSYPEI 64 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSMT----------VAQCLDYWFDNYVST 111 + DAR A+ R + GTDP + + W D ++T Sbjct: 65 GVSDARDRHAEYRAMVEQGTDPAEHRRQDKAERKAKESLQEDEGLFKAFSLKWIDERLAT 124 >UniRef50_A4F5J8 Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=A4F5J8_9BACT Length = 390 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 4/109 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D ++ + KP +VAD DGL + ++P G + F++ YR++ + + LG+Y Sbjct: 1 MALTDKAIKAL--KPGEKTYKVADRDGLYLSVAPSGTMSFRFNYRYNNRQQTVTLGKYGE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE--NSMTVAQCLDYWFDN 107 ++L AR+ + +G P +E + + LD + + Sbjct: 59 ITLAQAREKLLKAKADLAAGISPAKKKQEIKNTLAENSFSVWLDKYTEE 107 >UniRef50_A3M3W1 Phage integrase n=4 Tax=Acinetobacter baumannii RepID=A3M3W1_ACIBT Length = 401 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 3/112 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+++ L+ GK +E+AD D +SVRISPKG I FQ RYR+ GK RL LG YP Sbjct: 1 MALTEVWLKANNGKARDKVEEIADRDSMSVRISPKGKIVFQLRYRFAGKAERLDLGTYPH 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWFDNYV 109 +SLKDAR ++R L G +P+ + + + T + + W+++Y Sbjct: 61 MSLKDARIKAGEMRSLLDKGMNPKVEVRVQQQKYIDASTFEEVFNDWYESYC 112 >UniRef50_C3XC22 Integrase n=3 Tax=Oxalobacter formigenes RepID=C3XC22_OXAFO Length = 427 Score = 111 bits (278), Expect = 7e-24, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 4/108 (3%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH-GKPNRLGLGRYPS 60 +S +++ KP ++ D GL + + P G ++ +++ GK +RL LG YP Sbjct: 7 PLSPIQIKN--TKPKEKAYKLFDGGGLYLEVLPSGSKLWRLKFQKPSGKESRLSLGAYPD 64 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNY 108 +SL+ R+ + R+L G DP +E+ E + + D+ Sbjct: 65 VSLEQVRKKREEARRLLAQGIDPSEDRKEQKEAKQE-QDVIRAFKDDR 111 >UniRef50_D0BVL9 Phage integrase n=2 Tax=Acinetobacter RepID=D0BVL9_9GAMM Length = 441 Score = 111 bits (278), Expect = 7e-24, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 6/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY-RWHGKPNRLGLGRYP 59 + +SD+K KP + D GL + I G ++++Y R +GK + LG +P Sbjct: 6 IPLSDSKCTG--AKPQEKDYSLYDGHGLILFIRKSGSKVWRFKYKRANGKDGLMTLGNFP 63 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTY---FEEKVENSMTVAQCLDYWFDNYVSTTL 113 +LSLK AR +L L +G DP Y + K++N W Y +T Sbjct: 64 ALSLKTARDKRRELETLLANGIDPIEYSEIQKAKLDNKYNFESIAREWHTAYKNTGR 120 >UniRef50_Q4QL03 Prophage CP4-57-like integrase n=11 Tax=Haemophilus RepID=Q4QL03_HAEI8 Length = 419 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 9/111 (8%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYP 59 +S T++ KP ++D GL + + G ++++Y K + LG YP Sbjct: 11 PLSITEINN--AKPKEKDYSLSDGQGLFLLVKMNGSKIWRFQYYKPISKKRTLISLGVYP 68 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWF 105 +SLKDAR+I R L DP+ Y ++ + ++ T+++ W Sbjct: 69 EISLKDAREIRDLYRSLLAKNIDPQDYRLQQEQKAIQERQFTLSEMGKEWL 119 >UniRef50_C8U7P7 Integrase n=30 Tax=root RepID=C8U7P7_ECO10 Length = 414 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 67/112 (59%), Positives = 82/112 (73%), Gaps = 1/112 (0%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 A+SDTKLR +YGKPYSGP E+ D DGLSVRI+P G I FQYRYRW+GKP RL +GRYPS Sbjct: 27 ALSDTKLRGLYGKPYSGPAEITDGDGLSVRITPAGTITFQYRYRWNGKPVRLTVGRYPST 86 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTL 113 SLKDAR I ++R LY G +P+ YF + +T+ +CLD W+D YVS Sbjct: 87 SLKDARVIVGEMRALYMKGVNPKNYF-APSDGELTLKECLDQWWDKYVSGLK 137 >UniRef50_Q2YCS6 Putative uncharacterized protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCS6_NITMU Length = 133 Score = 111 bits (277), Expect = 9e-24, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D +R KP S ++AD G+ + + P G + +YR+ GK RL G YP Sbjct: 1 MKLNDVAVRK--AKPESKSYKMADGGGMYLEVMPNGSKYWWLKYRFGGKEKRLACGVYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDY 103 + L R D KL G DP + + + + + Sbjct: 59 VPLSLVRSWRDDACKLLAQGIDPGANCKSQKTVKQGQEANSFEVIARR 106 >UniRef50_B5QDA8 Phage integrase family protein n=1 Tax=Salmonella enterica subsp. enterica serovar Virchow str. SL491 RepID=B5QDA8_SALVI Length = 403 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 54/110 (49%), Positives = 70/110 (63%), Gaps = 3/110 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DTKLR I GKPY GP E+ D GLSVRISPKG+I FQYRYR++GKP RL LG Y S Sbjct: 1 MPLNDTKLRRIDGKPYDGPVEIPDGGGLSVRISPKGLITFQYRYRFNGKPVRLKLGVYGS 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWFDN 107 +S+K+AR +K G +P Y ++K S +A ++ W D Sbjct: 61 MSIKEARDAVEVCKKWLSEGKNPAVYRKLDKKKKTESPDIATLVNEWLDT 110 >UniRef50_A9I0E1 Phage-related integrase n=5 Tax=Burkholderiales RepID=A9I0E1_BORPD Length = 536 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 8/114 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +S+T+++ KP + D D L +R+ G + YRY KP +LG+G YP ++ Sbjct: 103 LSETQIKA--AKPGQKEYMLNDGDNLYLRVRITG-KAWIYRYMKDSKPIKLGMGPYPEVT 159 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWFDNYVST 111 L AR + +G DP+ E+ E + T W + Sbjct: 160 LAQARTKAYEANSQRANGLDPKEVREQLAEQTRIARLHTFELLARAWHASAKKD 213 >UniRef50_A5G0X3 Putative uncharacterized protein n=2 Tax=Acidiphilium cryptum JF-5 RepID=A5G0X3_ACICJ Length = 268 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 6/114 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D +R P ++ D+ GL + ++P G +++RY+ GK L +G Y + Sbjct: 2 LTDIAIRKAQI--RDKPYKMFDSYGLYLLVTPAGGKLWRFRYKIGGKDKLLSIGPYSEVM 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENS----MTVAQCLDYWFDNYVSTT 112 L AR + R +G DP ++ + + W S Sbjct: 60 LSAARDARDEARAGLRAGRDPSLVRKQLRAQAANDDRKFEKVACDWHTLNKSRW 113 >UniRef50_B8F555 CP4-57 prophage, integrase n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F555_HAEPS Length = 405 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 9/118 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYPS 60 + DT+++ K P + D GL + +S G +++ Y K ++ LG YP+ Sbjct: 8 LVDTEIKKAKAK--DKPYTLTDGGGLFLLVSITGSKSWRFNYYQPITKKRTKMALGMYPT 65 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVSTTL 113 ++L AR + + +KL DP+ Y + K + T + W + Sbjct: 66 VNLSKARALRDEYKKLLADDIDPQQYIKNKQQEKLQETQNTFLAIAEQWKQKKSAEIK 123 >UniRef50_Q74H29 Integrative genetic element Gsu32, integrase n=1 Tax=Geobacter sulfurreducens RepID=Q74H29_GEOSL Length = 439 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 5/115 (4%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 SD LR + KP P ++ + DG VR+ P G F Y Y + GK L LG+YP L Sbjct: 7 KFSDKFLRAL--KPQEKPYDIREGDGFGVRVFPSGARSFFYMYHFDGKRRFLNLGKYPQL 64 Query: 62 SLKDARQITADLRKLYFSGTDPRT---YFEEKVENSMTVAQCLDYWFDNYVSTTL 113 SL DARQ D + G DP + + ++TVA +D + N+ Sbjct: 65 SLADARQKHRDAVSQHAKGIDPLAATQEQKRERREAITVADLIDEYVKNWAKVYK 119 >UniRef50_B3GXJ8 Prophage CP4-57 integrase n=4 Tax=Pasteurellaceae RepID=B3GXJ8_ACTP7 Length = 406 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 9/117 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYP 59 +++T++ KP ++D GL +R+ P V + + Y+ + L +G YP Sbjct: 7 PLNNTEVEKAKIKPAE--YSLSDGYGLYLRVKPSKVKTWIFNYQEPITKRRTNLTIGDYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNYVST 111 ++S+ +AR I + R L G DP+T ++ +N T + W + Sbjct: 65 AISIAEARTIREEYRALLAKGIDPKTNKEEQERQQAEQNDNTFLKLAQLWKEKRSKE 121 >UniRef50_A6F4S5 Putative integrase n=1 Tax=Marinobacter algicola DG893 RepID=A6F4S5_9ALTE Length = 437 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 7/115 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 I+DTK R K +AD+ GL++ I P G ++YRYR HGK +G YP+++ Sbjct: 2 ITDTKARKAKAK--DTTYRLADSGGLALEIRPSGSKFWRYRYRLHGKAGMYTVGEYPTIT 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYWFDNYVSTT 112 + +AR I +K +G P + + E + T+ + W + Sbjct: 60 ISEARAIRDWAKKCVANGEAPAEVKKRELAERRAEQANTLEEVGKEWIARNKAGW 114 >UniRef50_A7MWW9 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7MWW9_VIBHB Length = 410 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 9/114 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH--GKPNRLGLGRYP 59 +S T+++ + K + + D DGL +RI P G + + Y K +GLG+YP Sbjct: 7 PLSATQVKNL--KSQAKEFSIGDGDGLLLRIMPNGTKSWLFNYIHPSTKKRKNIGLGKYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNY 108 +SL AR+ +R+L G DP+T+ EK+ T+ WF+ Sbjct: 65 DVSLATAREQRQTMRELVAKGIDPKTHRDNQQTAEKLAAQDTLLHVAKEWFELK 118 >UniRef50_C6XEE3 Integrase family protein n=2 Tax=Proteobacteria RepID=C6XEE3_METSD Length = 406 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 13/124 (10%) Query: 1 MA--ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH-----GKPNRL 53 MA ++D R + +++D GL + + G +++RY H K L Sbjct: 1 MAKNLTDLACRKATCE-GKTLSKLSDGGGLYLWVYANGAKYWRFRYFIHVEGGKKKEMSL 59 Query: 54 GLGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWFDNY 108 LG YP +SL DAR + L +G DP T + K E T A+ W+ Sbjct: 60 SLGVYPEVSLNDARVEARKYQGLVDNGIDPATAKKAKLLQTKAEAGDTFAEIAREWYRKM 119 Query: 109 VSTT 112 + T Sbjct: 120 MPTW 123 >UniRef50_A8EWJ5 Phage integrase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EWJ5_ARCB4 Length = 410 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 7/114 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 + D +++ KP + D GL + ++P +++RY ++GK + YP +S Sbjct: 7 LQDIQVK--QAKPTKETYYLFDGLGLYLEVTPNNAKIWKFRYTYNGKRKKTSFQSYPKVS 64 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVST 111 LK AR+ + +L F G DP Y++E+ E++ + W + S Sbjct: 65 LKQARKKRDNYNELLFDGIDPIEYYKEQKELKQIEDTSSFKNIFTQWLEMEKSK 118 >UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QCE7_9RHIZ Length = 418 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 7/121 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M + +L I P D GL +R+ P G + +RY KP LGLG S Sbjct: 1 MPKTTHRLNAISASNIKKPGLYPDGAGLYLRVKPSGARSWVFRYMHDRKPRYLGLGSAAS 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-------SMTVAQCLDYWFDNYVSTTL 113 +SL AR + D R+ G DP +MT +C + + + + Sbjct: 61 VSLATARSLAGDARRQLDLGQDPIEAKRAAERETAADKARAMTFKECAEAYMAAHEPSWK 120 Query: 114 R 114 Sbjct: 121 N 121 >UniRef50_D0SJJ0 Phage integrase n=6 Tax=Acinetobacter RepID=D0SJJ0_ACIJU Length = 406 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 7/108 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SDTK++ + KP + DA+ L + + P G ++ +Y H K + LG YPS+S Sbjct: 2 LSDTKIKNL--KPQEKMYRILDAERLYIEVRPTGKKVWRLKYTLHSKEGTISLGEYPSVS 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEE-----KVENSMTVAQCLDYWF 105 L +AR+ +++ L G +P + + NS T + + Sbjct: 60 LAEARKKKEEIKVLLKDGINPVQEKRKLHQENLIANSNTFKAIAEEYI 107 >UniRef50_A1SRI6 Phage integrase family protein n=2 Tax=Alteromonadales RepID=A1SRI6_PSYIN Length = 416 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 9/119 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 +SDT++R K ++D GL +RI P G +Q R+ KP +G G YP Sbjct: 6 PLSDTQIR--LTKASDKVITLSDGGGLQLRIKPNGSKLWQLRFNKPIEKKPALMGFGAYP 63 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVSTTL 113 ++SL +AR++ +L G +P+ + +++ + T W S Sbjct: 64 AISLANARKLREAANELLAQGINPKAQRDSEIKEKELILNNTFEMVTAAWIKLKASEVK 122 >UniRef50_A4SSF4 Phage integrase n=3 Tax=Proteobacteria RepID=A4SSF4_AERS4 Length = 404 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 6/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D R ++AD GL + ++ G ++ +YR GK +L LG YP Sbjct: 1 MPLTDITARQAKWSGKPNGDKLADEKGLFLLVNKSG-KYWKLKYRHGGKEKKLALGVYPE 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVSTT 112 +SL++AR + R++ G DP ++ S ++ W + + Sbjct: 60 VSLREARAKRDEARRVIAEGIDPGLVRKQSKVASRLVSENSLEVLAREWHQSQFALW 116 >UniRef50_B8EF22 Integrase family protein n=3 Tax=Shewanella baltica RepID=B8EF22_SHEB2 Length = 410 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 3/117 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD+ L+ GK E AD DGLSVR+SPKG + FQ RYR+ GK +RL LG YP+ Sbjct: 1 MALSDSWLKANSGKEIDKAYEKADRDGLSVRVSPKGKLTFQLRYRYIGKASRLDLGSYPA 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWFDNYVSTTLR 114 SLK AR L+ G DP+ ++EN+ T++ W + Sbjct: 61 TSLKSARTECLRLKGELEKGYDPKLVKINDRIEIENAPTISDLFYRWHSAKKIRNEK 117 >UniRef50_Q8ECV9 Site-specific recombinase, phage integrase family n=1 Tax=Shewanella oneidensis RepID=Q8ECV9_SHEON Length = 419 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 48/117 (41%), Positives = 61/117 (52%), Gaps = 4/117 (3%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD+ L+ K P E AD DGLSVR+S KG I FQ RYRW R+ +G YP Sbjct: 1 MALSDSWLKANLNKVADKPYEKADRDGLSVRVSAKGAITFQMRYRWASNAARVDIGPYPL 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM----TVAQCLDYWFDNYVSTTL 113 LSLK+AR+ RKL DPR Y +K ++ +V Q W + S Sbjct: 61 LSLKEAREQCEAYRKLLLDNQDPREYKRDKAAKAVSNEGSVEQVFRAWHKSQFSDGR 117 >UniRef50_B1Y4T5 Integrase family protein n=3 Tax=Betaproteobacteria RepID=B1Y4T5_LEPCP Length = 427 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 11/120 (9%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRI------SPKGVIQFQYRYRWHGKPNRLGLG 56 ++DT+ R +ADA GL + + +P G ++++YR GK L +G Sbjct: 2 LTDTECRNAKCPEGRAFVRLADAGGLYLEVKPPGAKTPSGSKLWRWKYRHGGKEKLLAIG 61 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVST 111 YP++S+ AR+ A R L +GTDP +E E+ + W+ + + Sbjct: 62 AYPAVSVAGARREQAKARALLDAGTDPGEARKEAKYAKLNEHETSFEAVARQWWAGWKAN 121 >UniRef50_B0RMR5 Prophage integrase n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RMR5_XANCB Length = 148 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD +R P P + D GL V ISPKG ++++YR+ GK RL LG YP Sbjct: 1 MPLSDAAVRN--ATPADKPVRLFDGGGLYVEISPKGAKLWRWKYRFGGKEKRLALGVYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE 88 +SL + R + RK+ SG DP Sbjct: 59 VSLAEVRAQHLEARKVLRSGIDPGEKRR 86 >UniRef50_A5V414 Phage integrase family protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V414_SPHWW Length = 417 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 9/122 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++ ++ K +G +++D GL++ + P G ++ +YR+ GK L LG +P Sbjct: 1 MPLTHIQIAA--AKASNGALKLSDGRGLTLVVQPSGSKVWRLKYRYEGKQKTLHLGHWPK 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYF-------EEKVENSMTVAQCLDYWFDNYVSTTL 113 + + +AR D RKL GTDP + K+ + + W + L Sbjct: 59 VGISEARIRREDARKLIEEGTDPALVKRFGPVAAKVKIVAGNSFRAVAEEWLEKCEREGL 118 Query: 114 RE 115 + Sbjct: 119 SQ 120 >UniRef50_P32053 Prophage CP4-57 integrase n=104 Tax=Gammaproteobacteria RepID=INTA_ECOLI Length = 413 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 9/117 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH--GKPNRLGLGRYP 59 ++DT+++ KP ++ D DGL++ I G +Q+RY + + G YP Sbjct: 7 PLTDTEIKA--AKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVST 111 ++SL DAR++ A+ + L DP+ + +E+V NS T + W++ ++ Sbjct: 65 AVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTS 121 >UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IRV8_BORPD Length = 402 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 11/112 (9%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 A+SD ++ +P P ++AD GL + + P G ++Y++R GK +GRYP + Sbjct: 9 ALSDRAVKN--ARPKDAPYKLADGGGLHLLVQPNGSRLWRYKFRLGGKEQVFAIGRYPDV 66 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFE---------EKVENSMTVAQCLDYW 104 L +AR+ R+L G P + T LD W Sbjct: 67 GLAEARERHLAARRLVADGVSPTAQRRDDRARMAEDAARAKAGTFKAVLDSW 118 >UniRef50_A5EUW8 Bacteriophage P4-like integrase n=3 Tax=root RepID=A5EUW8_DICNV Length = 399 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 4/110 (3%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD KLR + KP ++AD+ GL + P G I ++ RY GK L LG+YP++S Sbjct: 2 LSDAKLRKL--KPTEKKYKIADSHGLFAVVMPNGSILWRMRYVLAGKRRELALGKYPAVS 59 Query: 63 LKDARQITADLRKLYFSGTDP--RTYFEEKVENSMTVAQCLDYWFDNYVS 110 L +ARQI R+ G DP + K ++ +TVA+ ++ Sbjct: 60 LSEARQIVLLYREQIERGVDPHAQHVERHKKQDGVTVAEAVELLLSEKAK 109 >UniRef50_B7MX56 Integrase from prophage n=96 Tax=Gammaproteobacteria RepID=B7MX56_ECO81 Length = 419 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 9/119 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRW--HGKPNRLGLGRYP 59 ++ +++ +P + D GL + + P G +++ Y K L G Sbjct: 13 PLTTVQIKA--ARPAQKEYTLQDGGGLFLLVKPSGSKLWRFSYYRPSDKKRILLSFGSLE 70 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEK-----VENSMTVAQCLDYWFDNYVSTTL 113 +SL DAR+ ++ R L +GTDP+ + +K T W+ +S L Sbjct: 71 DVSLADARKRRSEYRTLISAGTDPQDHERQKRETEARRQGNTFENVAAAWYQVKISQNL 129 >UniRef50_Q0I4F8 Integrase n=1 Tax=Haemophilus somnus 129PT RepID=Q0I4F8_HAES1 Length = 413 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 8/115 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR-WHGKPNRLGLGRYPSL 61 +++TK+ + KP ++D GL + + G +++ Y K + LG YP Sbjct: 8 LTNTKI--LNAKPKDKDYTLSDGQGLYLLVKSNGSKLWRFNYYDLLKKRKLISLGSYPET 65 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVST 111 SL DAR + R L +P+ Y ++ E + T+ W + S Sbjct: 66 SLLDARTKRDEYRALLAKDIEPQDYIFKQKEQAIFNQCNTLIGVAKDWREMKSSK 120 >UniRef50_Q1R2C9 Integrase-like protein n=9 Tax=root RepID=Q1R2C9_ECOUT Length = 404 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 46/117 (39%), Positives = 65/117 (55%), Gaps = 3/117 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD LR++ GK +D DGLSVR+SPKG + FQYRY+W GK RL +G YP+ Sbjct: 1 MALSDAWLRSVVGKERDKVLVKSDRDGLSVRVSPKGRVVFQYRYQWAGKGERLDIGTYPA 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE---NSMTVAQCLDYWFDNYVSTTLR 114 LK+AR+ LR S +PR + + +MTV + W++ Y + Sbjct: 61 TGLKEAREEVIRLRGELESNRNPRLVKQAEKRKATEAMTVESVIRAWYEAYCVKNKK 117 >UniRef50_A7JSX8 Bacteriophage integrase n=3 Tax=Pasteurellaceae RepID=A7JSX8_PASHA Length = 413 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 11/114 (9%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISP--KGVIQFQYRYRWH--GKPNRLGLGR 57 A++ T++ K ++D DGL++R+ P KG + + Y L +GR Sbjct: 7 ALNKTQIEN--AKSKDKEYILSDGDGLNLRVKPLPKGSKIWIFNYTNPQTKNRTNLTIGR 64 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWFD 106 YP ++L +AR I R L G DP+ + + + T + +F+ Sbjct: 65 YPLITLAEARTICDGYRSLIEKGIDPQEEKKRLQQEAENRVNDTFRNVAESYFN 118 >UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella RepID=A5I9N5_LEGPC Length = 407 Score = 107 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 4/117 (3%) Query: 1 MA-ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 M +DT +R + K E + G +RI+P V + YRY+ +G + LG YP Sbjct: 1 MKNFTDTYIRNLKAK--EKRYEEFEGGGFGIRITPNNVKTWIYRYKINGVTTKFTLGHYP 58 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-SMTVAQCLDYWFDNYVSTTLRE 115 ++SL +A++ +L ++ G DP+T + + E + TV + W+ NY+ ++ Sbjct: 59 AMSLSNAKRRFLELSQMRREGVDPKTVIQAQEEQDNNTVDKLALNWYTNYIEKHVKR 115 >UniRef50_A0KW55 Phage integrase family protein n=30 Tax=Gammaproteobacteria RepID=A0KW55_SHESA Length = 411 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 10/121 (8%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG--KPNRLGLGRYP 59 ++ + + K + P ++D L + + G +++RY KP GLG YP Sbjct: 7 KLTAKAV--LNAKAEAKPYRLSDGGNLYLYVRTAG-KTWEFRYIRPSTSKPTYFGLGSYP 63 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNYVSTTLR 114 +SL +AR + RK G DP+ + EN+ T+ W D+ + Sbjct: 64 DVSLAEARDKALEARKNLAEGIDPQLLKVENKLKAATENAQTLKHIAQMWMDSKQGSIKP 123 Query: 115 E 115 + Sbjct: 124 K 124 >UniRef50_B7I6Z3 Site-specific recombinase, phage integrase family n=3 Tax=Moraxellaceae RepID=B7I6Z3_ACIB5 Length = 414 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 8/114 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 ++DTK++ + +++D GL + I +++ Y + K N +G G YP Sbjct: 7 PLTDTKIKKAKSE-NGKSLKLSDGSGLYLLIDKNQNKFWRFDYSRPYTKKRNTIGFGSYP 65 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNY 108 +SL DAR + R L DP+ + + T A W Sbjct: 66 EVSLADARSKRDEARTLLAQNIDPQVERKRVEQEHINSEKNTFAAVAAEWESKQ 119 >UniRef50_Q1Q875 Phage integrase n=3 Tax=Gammaproteobacteria RepID=Q1Q875_PSYCK Length = 452 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 10/119 (8%) Query: 3 ISDTKLRTIYGKPYSG-----PQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGR 57 +SD K+R + KP P + +D GL + + G + YR+ GK + LG Sbjct: 2 LSDAKIRKL--KPTDKCTPSRPDKYSDQQGLQLLVRSSGTRTWVSAYRFDGKQQKTTLGT 59 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYFEEKV---ENSMTVAQCLDYWFDNYVSTTL 113 YP + L +AR AD++ L +G +P+ + E + T W + Sbjct: 60 YPQMGLAEARVANADIKALVANGINPKNKKRQDKLANEQAKTFNDYAVEWLEERERNVK 118 >UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0X2_ACICJ Length = 410 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 6/120 (5%) Query: 1 MAISDTK-LRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 M + +K L + + + D GL +R+ G + +RY G+ + + LG Sbjct: 1 MPKTVSKRLNALAITNANREGNLHDGGGLYLRVRADGSKSWAFRYTMAGRKHWMSLGPLR 60 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTTLR 114 +SL +AR+ LR L G DP E+ + + T + + + + Sbjct: 61 DVSLSEAREQARQLRNLVRDGFDPLAQRRERQHLAAEQTARTFDAVAAAYVEAHRAEWSN 120 >UniRef50_D2MI75 Phage integrase family protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MI75_9BACT Length = 398 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 7/114 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++ KLR + P D L +++SP G + R+ GK + +GLG +P + Sbjct: 3 KLTFGKLRALN-----EPGLYGDGGTLFLKVSPGGSKSWVQRFTIKGKRHDVGLGGWPVV 57 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEE--KVENSMTVAQCLDYWFDNYVSTTL 113 SL++AR+ D R+ G DP ++ K T +++ + Sbjct: 58 SLQEARERAFDNRRAVAHGRDPLAEKQKASKAAAVPTFRAVARKYYEENLPRWK 111 >UniRef50_A6VNS1 Phage integrase family protein n=7 Tax=Pasteurellaceae RepID=A6VNS1_ACTSZ Length = 427 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 10/120 (8%) Query: 1 MAISDTKLRTIY---GKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH--GKPNRLGL 55 MA+ L KP ++D GL + I P G + + Y K + Sbjct: 1 MALLVKHLSAAQINAAKPKDKIYYLSDGLGLRLAIKPNGTKTWLFNYTKPYIKKRTDKTI 60 Query: 56 GRYPSLSLKDARQITADLRKLYFSGTDPRT-----YFEEKVENSMTVAQCLDYWFDNYVS 110 G+YPS+SL DAR + R+L DP +E++ S T + + W Sbjct: 61 GQYPSVSLADARAKAHEFRELLAKNIDPHQNEIEKEKQERLPMSNTFSHVANEWLVYREK 120 >UniRef50_B8GNQ7 Phage integrase family protein n=6 Tax=Proteobacteria RepID=B8GNQ7_THISH Length = 422 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 6/115 (5%) Query: 1 MAISDTKLRTIYGKPYSG-PQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 MA++ R + P P + D L + ++P G ++YRYR GKP +G+YP Sbjct: 1 MAMNLLSARKVETIPSQKEPYWLKDGGSLFLYVTPSGSKLWRYRYRLGGKPAIYAIGKYP 60 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFE-----EKVENSMTVAQCLDYWFDNYV 109 +SL+ AR R+L G P + +N T W + V Sbjct: 61 QVSLEAARTERDRARELVKKGVHPVVEKRVNISTQLEKNENTFEPVARRWMASNV 115 >UniRef50_Q0F3U9 Prophage CP4-like integrase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3U9_9PROT Length = 228 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 1/100 (1%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SD ++ +++D GL + + P G ++ YR+ GK L LG YP+ Sbjct: 1 MALSDEQVNEASIPEGKKQLKISDGGGLYLLVKPSG-RYWKLAYRFDGKQKSLALGVYPA 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQC 100 +SL DARQ + L G DP +++ ++ Sbjct: 60 VSLDDARQKREQAKSLLADGVDPGVVKQQQKRRAVATETV 99 >UniRef50_Q4QNN7 Prophage CP4-57-like integrase n=4 Tax=Haemophilus influenzae RepID=Q4QNN7_HAEI8 Length = 403 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 9/119 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYP 59 + DT+++ K + P + D GL + ISP G +++ Y K ++ LG YP Sbjct: 7 PLVDTEIKK--AKASNKPYTLTDGYGLFLIISPTGSKSWRFNYYRPITKKRAKISLGLYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEK-----VENSMTVAQCLDYWFDNYVSTTL 113 +++L AR++ R+L + DP+ Y ++ + T W VS Sbjct: 65 AITLSKARELREQYRQLLANKIDPQEYIKQHELLQLQRQNNTFFAISTQWKQKKVSEIK 123 >UniRef50_UPI0001BCF971 integrase n=1 Tax=Mannheimia haemolytica serotype A2 str. OVINE RepID=UPI0001BCF971 Length = 188 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 11/121 (9%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY----RWHGKPNRLGLGR 57 ++ T++ KP +AD GL + + P G +++ Y K + +G Sbjct: 7 PLNSTQIDK--AKPKEKEYTLADGKGLYLLVKPNGTKLWRFNYYKPYTNPKKQALISIGS 64 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNYVSTT 112 YP +SL+ ARQ + L DP+ + E+ T A + W + Sbjct: 65 YPDVSLQQARQTKDEYNALLAQNIDPQAHRIETTITEQNRLVNTFAYVAEQWKASKEDVI 124 Query: 113 L 113 Sbjct: 125 K 125 >UniRef50_A1ATP4 Phage integrase family protein n=2 Tax=Desulfuromonadales RepID=A1ATP4_PELPD Length = 449 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 8/120 (6%) Query: 1 MA---ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGR 57 M +DT +R + KP ++ +G ++R+ P G + Y Y + GK ++ LG Sbjct: 9 MKKTTFTDTMIRKL--KPTESDYTRSEGNGFTIRVMPSGSKTWLYLYAFDGKRRKMNLGS 66 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPR---TYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 YP ++L+ AR D ++ + DP E+ + TVA + + + + R Sbjct: 67 YPDVTLETARGRFEDAKRKVKNNIDPMAEAEEQAEERRKAPTVADLVHDYIERHAKRFKR 126 >UniRef50_Q5E028 Phage family integrase n=2 Tax=Vibrionaceae RepID=Q5E028_VIBF1 Length = 399 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 9/116 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPS 60 ++D K+++ P ++D +GL +R+ P G +Q+++ K ++ LG YP Sbjct: 8 LTDRKIKSAA--PTGKEFTLSDGEGLQLRVRPTGAKSWQFKFSDPVTRKIQKIALGPYPE 65 Query: 61 LSLKDARQITADLRKLYFSGTDPR-----TYFEEKVENSMTVAQCLDYWFDNYVST 111 LSL +AR T + R L +P+ E K + T + WF+ T Sbjct: 66 LSLANARSKTTEYRTLLAQKINPKSFEQSKELEAKRVQTSTFIVVAEQWFERKKET 121 >UniRef50_A3M8T8 Phage integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M8T8_ACIBT Length = 425 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 7/112 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 + DT+++ + KP P DAD L + + P G + +++ + K + G YPS+S Sbjct: 2 LKDTQVKNL--KPQDKPYRKLDADRLYIEVRPSGKKVWIHKFSLNKKEGSITYGEYPSIS 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNYV 109 L +AR A R L G +P + E T + D W + + Sbjct: 60 LAEARYYHARDRALLAKGINPVAHRNETARLALETEQETFKKYGDEWKEKHK 111 >UniRef50_B7N6K6 Prophage CP4-57 integrase n=8 Tax=Enterobacteriaceae RepID=B7N6K6_ECOLU Length = 415 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 9/117 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH--GKPNRLGLGRYP 59 +++ ++ KP S E+ D +GL + + G + + Y K + LG YP Sbjct: 7 PLTNVEI--AGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFDNYVST 111 ++L AR+ R+L + G DPR + E++++N T+ + + W T Sbjct: 65 VVTLAMARETRTKYRRLLWQGIDPRQHLAGIAEEKRLQNECTLEKVAEQWLKEKKRT 121 >UniRef50_C6RGV6 Phage integrase n=3 Tax=Campylobacter RepID=C6RGV6_9PROT Length = 407 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 9/120 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPS 60 + DT++R K + D GL++ I+ KGV + + Y GK G G YP Sbjct: 20 LKDTQIRKAIKK--EKDYSLTDGGGLAILITSKGVKGWVFYYIDPVSGKKCSAGFGLYPD 77 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVSTTLRE 115 ++L AR++ A+ + L G P+ + ++ E T ++ + W + L + Sbjct: 78 ITLARARELRAEYKSLISQGISPKEHKKQAREQRQSDHKQTFSKVFNEWLELEKMRVLPK 137 >UniRef50_A1SXI0 Phage integrase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SXI0_PSYIN Length = 216 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 9/119 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH--GKPNRLGLGRYP 59 +++ ++ P + D +GL + + PKG ++Y Y K LGLG YP Sbjct: 17 PLTEQEIEG--ATPKEKEYNLGDGNGLYLYVRPKGTKSWKYNYTHPYTKKRANLGLGVYP 74 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWFDNYVSTTL 113 +++L+ AR + + L + DP+ + + K++ ++ W S Sbjct: 75 NVTLEQARMVRDEFNSLLANNIDPKKHRDAKIKEETEVNQYLFDNVVNDWLKVKASELK 133 >UniRef50_Q1QA94 Phage integrase n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QA94_PSYCK Length = 413 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 7/116 (6%) Query: 1 MAISDTKLRTIYGKPY----SGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLG 56 M ++ T + + P + +D +GL + + GV + YRW GK L +G Sbjct: 1 MPLTHTVINKLQPSSTSIDTKRPDKHSDGNGLQLWVRYTGVKSWISAYRWQGKQQTLTIG 60 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENS---MTVAQCLDYWFDNYV 109 YP +SL++ARQ ++++L G +P+ + +E+ + W+ Sbjct: 61 TYPVMSLQNARQRNIEIKRLIADGVNPKDHKKEQQASQDGLNIFDNIAQSWYAERK 116 >UniRef50_B4WZP4 Site-specific recombinase, phage integrase family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WZP4_9GAMM Length = 400 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 5/110 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++ +R +P ++ D GL + + G ++ YR+ G+ + LG P Sbjct: 1 MALTSADVRN--AEPLQKDYKLHDDKGLYLLVETDGNRTWKLSYRFDGRSKVITLGPCPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWFDN 107 ++L ARQ+ + R+L G DP + ++ S T W + Sbjct: 59 VTLSFARQLRDEARELIADGIDPISRCVKREVFSPSVETFEAVARDWLER 108 >UniRef50_C0VMY9 Integrase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VMY9_9GAMM Length = 429 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 8/120 (6%) Query: 2 AISDTKLRTIYGK-PYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRY 58 ++ +++ + + Q D GL + I ++ YR K N L +G Y Sbjct: 7 KLTAKEVKNLSFDVSGAKKQRHPDGGGLYLLIDETEAKYWRMDYRRPVTQKYNTLAIGTY 66 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVSTTL 113 P++SL+ AR + +K+ +G DP K T ++ W D Sbjct: 67 PTISLEQARSKRDEFKKMLANGIDPAEQRNNKKREQLQTLENTFSKFAAEWLDIRKHEGK 126 >UniRef50_Q6AR70 Probable prophage integrase n=1 Tax=Desulfotalea psychrophila RepID=Q6AR70_DESPS Length = 399 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 12/117 (10%) Query: 8 LRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDAR 67 L+ + + P ++D GLS ++ GV ++ YRYR K LGRYP LSL+ AR Sbjct: 4 LKALQVRNAKDPCRLSDGLGLSFEVTKSGVKRWLYRYRLDDKQQMCVLGRYPELSLEQAR 63 Query: 68 QITADLRKLYFSGTDPRTYFEEKVEN------------SMTVAQCLDYWFDNYVSTT 112 +I + R L G +P K + S + W +N + Sbjct: 64 KIHREARALVREGCNPARERRRKKQEVISKEKAERDDRSKSFEYIALEWIENNKESW 120 >UniRef50_C9M6R5 Site-specific recombinase, phage integrase family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6R5_9BACT Length = 393 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DT ++ + K + D +GL + + P G + RY K ++L +G YP + Sbjct: 2 LTDTAIKRL--KLGETRYLILDGNGLYLLVCPNGRKVWTVRYWIDKKLHQLTIGDYPMMG 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 L +AR +++ D R + +T + W++ L + Sbjct: 60 LAEARAERDEIKN------DARYEKKVAAPMGLTFGEFAREWYEKRKRPKLSK 106 >UniRef50_C8QZM9 Integrase family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZM9_9DELT Length = 409 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M S+ K+R + P S + +A+G SVRI P G + + Y + GK + LG YP+ Sbjct: 1 MKFSEAKIRNLR--PQSKKYYLREANGFSVRIMPSGAKTWLFIYTFDGKRKEMNLGHYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRT---YFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 ++L+ AR+ L+ G DP +E+ + ++ +D + + + R Sbjct: 59 VTLEAARRKYRAAFDLFEQGNDPVAMHLEKKEERRRTPFLSDLVDEYINKHAMRFKR 115 >UniRef50_P06155 Integrase n=9 Tax=root RepID=VINT_BPPH8 Length = 402 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 3/110 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 I+DTKLR GK + ++D+ GL+ RIS G I F YRYRW GK +L +G YP++S Sbjct: 7 ITDTKLRKALGKKRDDIEIISDSHGLNARISQAGKISFFYRYRWAGKAVKLNVGDYPAMS 66 Query: 63 LKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWFDNYV 109 + AR+ R G DPR ++ + +M+VA+ +YW + + Sbjct: 67 ITQARERRQQFRNWLTEGLDPREQVKLDKQTRQEAMSVAEAFNYWIERHC 116 >UniRef50_B6BKY5 DNA integration/recombination/inversion protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKY5_9PROT Length = 400 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 52/110 (47%), Gaps = 6/110 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +++T+++ K ++D GL + ++ G +++RY+++ K ++ LG YP Sbjct: 7 PLTETQIKNAKAK--EKTYILSDGAGLYLEVNINGGKWWRFRYKYNDKIKKVSLGVYPDT 64 Query: 62 SLKDARQITADLRKLYFS-GTDP---RTYFEEKVENSMTVAQCLDYWFDN 107 +L +AR+ + R + + DP +++ T + +++ Sbjct: 65 TLANARRKRDEARNILANDNRDPFIKIVVHKKEEVVQKTFQEWAEWYITE 114 >UniRef50_B9NUX0 Site-specific recombinase, phage integrase family n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NUX0_9RHOB Length = 404 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 12/125 (9%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D L+ + +P + +DA GL + + P G + YR+ GK + G YP Sbjct: 1 MPLTDIALKNM--QPSGRAYKRSDAHGLYILVKPNGSKHWHLHYRFLGKQKVMSYGPYPL 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDN-----YVS 110 +SLK+AR+ RK G DP +E+ + Sbjct: 59 ISLKEAREKRDRDRKFLIEGIDPMVVKKERKLASERAQRGRFDILAAELLEKNRVEGRAE 118 Query: 111 TTLRE 115 TL++ Sbjct: 119 QTLKK 123 >UniRef50_D0J426 Phage integrase n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J426_COMTE Length = 416 Score = 104 bits (261), Expect = 6e-22, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 5/115 (4%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++D + R P + + +DA GL + +SP G ++ ++YR GK RL LGRYP +S Sbjct: 2 LTDAQCRNAVCSPGAKRERFSDAGGLYLEVSPAGSRRWFWKYRKDGKEGRLALGRYPEVS 61 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----TVAQCLDYWFDNYVSTT 112 L AR+ R G DP + + + T W++ V Sbjct: 62 LTAARKARDAARLQKSEGIDPAKARKLEKLVNPTGVADTFKAVALEWYEKQVPRW 116 >UniRef50_A0YFV5 Integrase, phage related protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFV5_9GAMM Length = 325 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 5/116 (4%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +DT +R++ KP + E+++ GL +R+S G + Y YR + + RL +GRYP++ Sbjct: 5 PFTDTYIRSL--KPKAERYEISEPGGLRLRVSSSGKKSWVYVYRQNKRLRRLTIGRYPNI 62 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWFDNYVSTTLR 114 SL AR A R G DP + K + + TV Q + + + + + Sbjct: 63 SLSAARVEIAKARLTREKGIDPAIEAQLKTQKRLHAPTVEQLISLYIEQHAKLKKK 118 >UniRef50_A1ANR7 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ANR7_PELPD Length = 453 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 20/132 (15%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +DT +R + KP +V + DG VR+ P G+ F + Y GK ++ LG YP+ Sbjct: 1 MKFTDTGIRNL--KPKEKMYQVREGDGFGVRVLPSGLRIFVFIYTIAGKRRQMNLGDYPA 58 Query: 61 LSLKDARQITADLRKLY-FSGTDPRTY-----------------FEEKVENSMTVAQCLD 102 +SL +AR+ AD RK+ TDP+ + E++ + TV Q + Sbjct: 59 VSLSEARERAADARKVLSRERTDPQEHGFSWHYSPERERREMAAKEKEELENPTVKQLIT 118 Query: 103 YWFDNYVSTTLR 114 + + Y + Sbjct: 119 RYIERYAMKNKK 130 >UniRef50_A7ZQ61 Phage integrase family protein n=32 Tax=Gammaproteobacteria RepID=A7ZQ61_ECO24 Length = 436 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 12/120 (10%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISP---KGVIQFQYRYRWH--GKPNRLGLG 56 ++DT++++ KP + D DGL +RI+P G + +RY K ++ LG Sbjct: 34 KLTDTEIKS--TKPAEKEVNLFDGDGLLLRIAPLAKGGKKNWYFRYAVPVTKKRTKVSLG 91 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVST 111 YP L+L AR + + L +G DP+ + +K T W D V T Sbjct: 92 TYPHLTLAKARALRDEYLSLLTNGIDPQVHNNQKANALKDATEHTFQAVAKKWLDEKVKT 151 >UniRef50_A7JZW2 Site-specific recombinase, phage integrase family protein n=2 Tax=Vibrio sp. Ex25 RepID=A7JZW2_VIBSE Length = 471 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 9/109 (8%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYP 59 +++T+++ ++D L +RI G + + Y K ++GLG YP Sbjct: 28 KLTNTQIKNAAK--SDKEYSLSDGGNLYLRIRKNGSKNWLFIYTDFSTKKRKKMGLGSYP 85 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDY 103 +++L + R++ +LRK G DP+ + E++ E+ +T + Sbjct: 86 NMTLDEVRKVAKELRKQMTKGIDPKLFREKQKLDRLVESQLTFKAIAEK 134 >UniRef50_Q1QLT5 Phage integrase n=2 Tax=Alphaproteobacteria RepID=Q1QLT5_NITHX Length = 416 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 7/118 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DT +R KP P ++AD+ GL + +S G +++RYR+ K L +G YP +S Sbjct: 7 LTDTAIRK--AKPGDKPFKMADSGGLHLYVSTAGGKLWRFRYRYADKEKLLTIGPYPDIS 64 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVSTTLRE 115 L DAR + G DP + + + T W+D + Sbjct: 65 LVDARAARDAAKASLRDGRDPGVIKKLRKLANVTSTANTFEAIAREWYDLNKGQWVER 122 >UniRef50_C7HXY0 Integrase family protein n=1 Tax=Thiomonas intermedia K12 RepID=C7HXY0_THIIN Length = 392 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 6/114 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++ + KP P ++ D GL + ++P G+ ++ Y +GK GRYP+ Sbjct: 1 MSLTVKAVDA--AKPQERPYKLTDGGGLYLFVAPTGLKSWRANYELNGKQRTRTYGRYPA 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 ++L AR+ + + + T + W + + Sbjct: 59 MTLAQAREAHTQAKSTPAE----AATVTPIAKVAPTFKAITEQWLKIKLPSLSN 108 >UniRef50_C6ALW6 Prophage integrase n=2 Tax=Pasteurellaceae RepID=C6ALW6_AGGAN Length = 413 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 8/118 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPS 60 +++T++ + P + D GL + I P G ++++RY + +G +PS Sbjct: 8 LTNTQVERVKYTPNGKNV-LNDGKGLFLEIYPTGAKKWRFRYERPITKARTKFNIGDHPS 66 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVSTTL 113 ++L AR + L G DP+ + ++K + T + + W +N Sbjct: 67 ITLAQARVKRDEYNALLAQGIDPQEHAKQKHQALQFQLENTFLKWAERWKENKEKKVK 124 >UniRef50_Q4K6S7 Site-specific recombinase, phage integrase family n=4 Tax=Proteobacteria RepID=Q4K6S7_PSEF5 Length = 413 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 8/118 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY-RWHGKPNRLGLGRYPS 60 ++DT L + P + D +GL R+ P G +Q RY R G +GLG YP Sbjct: 10 PLADTTLTGLE--PEAKEYRELDGNGLYFRVKPDGGKSWQLRYKRPAGNWAWMGLGGYPE 67 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVSTTL 113 +S AR+ A+LRK SG DP + T D W L Sbjct: 68 VSGALAREKAAELRKTISSGIDPLEQKRSAKAAIDAAKTRTFRAAADAWLKAKEEKGL 125 >UniRef50_C4U2J7 Phage integrase family protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U2J7_YERKR Length = 369 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 46/114 (40%), Positives = 71/114 (62%), Gaps = 3/114 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD KLR + GKP E+ D+ GLS+R++P G++ FQYRYR+ KP R+ LG Y LS Sbjct: 12 LSDAKLRKLSGKPIPKLIEMPDSGGLSIRVTPLGLVVFQYRYRFGVKPRRMTLGVYDDLS 71 Query: 63 LKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWFDNYVSTTL 113 LK+AR++ + +++ SG DP E E S+TV+ C+ +W ++ + L Sbjct: 72 LKEAREMVQESKRILLSGRDPIIVKEMELENKVASVTVSLCIKHWLESAQAKLL 125 >UniRef50_B8F737 Phage integrase family site specific recombinase n=4 Tax=Pasteurellaceae RepID=B8F737_HAEPS Length = 416 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 43/115 (37%), Gaps = 9/115 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYP 59 + T++R KP ++D GL + + G F + Y + +G YP Sbjct: 4 KLVGTQIR--QAKPKDKDYPLSDGGGLRLIVRKSGAKVFVFNYYKPYTKTRTNFTIGEYP 61 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYV 109 +SL AR+ A R L DP E + +T + WF++ Sbjct: 62 EISLIQARKEHAKARALLAQNIDPVRQRELDKQEQANRLELTFEKMAVKWFEDRK 116 >UniRef50_C6DZF1 Integrase family protein n=1 Tax=Geobacter sp. M21 RepID=C6DZF1_GEOSM Length = 443 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 9/118 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +DT +R + KP ++ +G +VR+ P GV + Y Y + GK + LG YP +S Sbjct: 9 FTDTMIRKL--KPGEVKYIRSEGNGFTVRVMPSGVKTWLYLYSFEGKRREMNLGGYPHVS 66 Query: 63 LKDARQITADLRKLYFSGTDPRTY-------FEEKVENSMTVAQCLDYWFDNYVSTTL 113 L+ AR+ RK + DP E + + +T + + + V L Sbjct: 67 LETARERFEAARKKVKNNIDPMAENPKVAEVVEVERRHDLTFDELAQEYIADNVEDQL 124 >UniRef50_C3NUM0 Phage Integrase n=55 Tax=root RepID=C3NUM0_VIBCJ Length = 413 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 3/118 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+S + L K AD DGLS R+SPKG I FQ+RYR+ GK R+ +G YP Sbjct: 1 MALSVSWLDARLNKEAKETVVKADRDGLSARVSPKGKIVFQFRYRFDGKQQRVDIGTYPL 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE---NSMTVAQCLDYWFDNYVSTTLRE 115 + L +AR LR + G +P+ Y +++ + + W D+ L+E Sbjct: 61 MKLAEARNELDRLRAVLDQGRNPKLYLQQERAKYSANQSFESIFRDWIDSAGKQGLKE 118 >UniRef50_B1Y3M2 Integrase family protein n=4 Tax=Proteobacteria RepID=B1Y3M2_LEPCP Length = 433 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 44/129 (34%), Gaps = 19/129 (14%) Query: 3 ISDTKLRTI--YGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 + D +R + + D DGL + + P G +++RYR+ GK L LG YP Sbjct: 7 LDDKSIRAAIKRAMKAQAGERLTDGDGLRLDVQPTGSAWWRWRYRFGGKEGMLSLGTYPD 66 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----------------TVAQCLDY 103 SL AR + R+ +G +P ++ T Sbjct: 67 TSLSAARGRRDEARERLAAGINPSEARKDDKAAQALKAEAARLAAAGLPGPGTFEHAARE 126 Query: 104 WFDNYVSTT 112 W + Sbjct: 127 WHARMAPSW 135 >UniRef50_B5WB94 Integrase n=1 Tax=Burkholderia sp. H160 RepID=B5WB94_9BURK Length = 295 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++ L+ KP S P ++ D D + +R+S G +++ YR GK LGR+P+ Sbjct: 1 MRLTYPLLQN--AKPRSKPYKLRDRDSMYLRVSVSGSKVWKFDYRLDGKDCSYTLGRFPN 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNYVSTT 112 +S+ DARQ+ KL SG P+ Y ++ + + T+ + W ++ Sbjct: 59 VSIADARQLRNAAAKLVASGIHPKAYEKQLQQQTVAHQKNTLWPVCEEWLEDNRGKW 115 >UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NM52_9DELT Length = 406 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 5/114 (4%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD +LR I P E+ D GL + + P G + RY++ GKP R+ LG YP Sbjct: 1 MGLSDAQLRKIR--PRESRFELTDGKGLVLLVLPSGRRSWLLRYQFEGKPRRITLGEYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN---SMTVAQCLDYWFDNYVST 111 +SL AR + R + G DP E+ S TV+ L ++D + Sbjct: 59 MSLLQARNASEATRSIIKQGLDPALKRTEEKTAHKTSPTVSDLLTEYWDMELKE 112 >UniRef50_A7H0X5 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter curvus 525.92 RepID=A7H0X5_CAMC5 Length = 396 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 7/111 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYPS 60 ++D+K++ + KP +++D D L +++ P G F Y + R G+ R+ LG+YP+ Sbjct: 4 LNDSKIKAL--KPKEKRYKISDGDNLYIQVMPSGTKTFIYEFKSRSSGRYKRISLGQYPA 61 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVST 111 +SL AR+ + +K +G +P + + + D WF Sbjct: 62 ISLLMAREKRLEFQKALANGDEPMSE---AKQAMTSFEAVFDEWFKFKQKE 109 >UniRef50_A4BQA0 Prophage CP4-like integrase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQA0_9GAMM Length = 291 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 10/117 (8%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++ +++ K P ++ D DGL + ++P G ++ +YR +G+ L LG P + Sbjct: 2 LTVQEIKN--AKASDKPWKLYDRDGLYLFVTPTGGKLWRGKYRVNGREKTLSLGPCPKVG 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENS----MTVAQCLDYWFDNYVSTTLRE 115 L +AR+ D R+L DP + + + S T W R+ Sbjct: 60 LAEAREKWQDARRL----DDPSAVKQVEKQASDSTTPTFLAVAKEWRTRQTPGWTRK 112 >UniRef50_B7NKE6 Integrase of prophage n=42 Tax=Enterobacteriaceae RepID=B7NKE6_ECO7I Length = 416 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 7/119 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKP----NRLGLGR 57 +SDT+LR I G P + D LSVR S G++ + + YR R+ LG Sbjct: 14 KLSDTQLRKINGTPAQKTAFLNDGGNLSVRHSTSGLLTWYFTYRAGTGRGAPPERIKLGN 73 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWFDNYVSTTL 113 YP LSLK AR+ A R G +PR ++ +TV L YW ++Y Sbjct: 74 YPDLSLKSAREKAAQCRAWLAEGKNPRHELNYTVQEALKPVTVGDALTYWLESYAKENR 132 >UniRef50_C6RPH9 Site-specific recombinase, phage integrase family n=2 Tax=Acinetobacter radioresistens RepID=C6RPH9_ACIRA Length = 159 Score = 102 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 9/115 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M+++D + P ++D +GLS+R+ P G + RY +G+ LG YP Sbjct: 6 MSLTDVLCKKAL--PQEKQYRLSDINGLSLRVDPNGKKYWSIRYTENGQRKSKALGIYPE 63 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 LSLK AR+I DLR + T E + + + WF+N T + Sbjct: 64 LSLKRAREIAFDLRYKLKNTT-------EVEQEQPYFKEVAEDWFNNQKETWSSK 111 >UniRef50_C1TL52 Integrase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL52_9BACT Length = 378 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 11/109 (10%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+++ +++ P + D++GL + I+P G ++ R++ G+ + LGRYP Sbjct: 1 MALTNVEIK--RATPREKRYTMRDSEGLWLEITPAGKKTWKVRFKAQGREIKHTLGRYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYV 109 +SLK+AR ++R + K T + WF+ V Sbjct: 59 ISLKEARLKRDEIRLELVN---------HKSVPEGTFKALAEEWFERQV 98 >UniRef50_A3J962 Putative integrase prophage protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J962_9ALTE Length = 240 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 8/112 (7%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +S +++ K +++AD GL++ I +G + RYR+ G L +G YP + Sbjct: 7 KLSANEVKN--AKGSGEIRKLADGGGLTLVIK-RGSKYWWLRYRFAGNEKTLSIGGYPQV 63 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNY 108 SL ARQ ++L DP + ++ T + W+ Sbjct: 64 SLAAARQARDSAKELLKQYIDPSAHRRQESTQRTSDGENTFRTLCEDWYQQK 115 >UniRef50_Q0I4P6 Integrase n=14 Tax=Pasteurellaceae RepID=Q0I4P6_HAES1 Length = 418 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 11/120 (9%) Query: 3 ISDTKLRTIYGKPYSG----PQEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLG 56 +++ K+ K ++ D +GL + + G +++ Y K + LG Sbjct: 8 LNNRKIDAAKPKADEQGNLTDNKLQDGNGLYLLVKATGSKLWRFNYYKPLTKKRTEMSLG 67 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVST 111 YP +SL AR++ R L DP + + + + T WF+ + Sbjct: 68 AYPDVSLAQARELRNQYRSLLAQDIDPNEHRQNVKQAKLDEINNTYEAVAWAWFEYRQTK 127 >UniRef50_D0SUB2 Predicted protein n=2 Tax=Acinetobacter RepID=D0SUB2_ACILW Length = 396 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 9/115 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++DT+ R +P ++D GLS+ I+ KG + R HG+ LG YP Sbjct: 17 MPLTDTECRK--AQPKDKQYRLSDLHGLSLIITTKGQKYWNVRVTVHGERKSESLGPYPD 74 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 LSLK AR++ +L+ Y + + + WF+N T + Sbjct: 75 LSLKKARELAYELKHRYSRSV-------LHEDLKPYFEEVAEDWFNNQKETWSSK 122 >UniRef50_Q1NEP8 Putative integrase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEP8_9SPHN Length = 156 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 40/93 (43%) Query: 12 YGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITA 71 +P ++ D GL + + P G ++ Y + GK L G +P + L DAR+ Sbjct: 27 SARPREREYKLTDGAGLYLLVKPNGRKLWRLNYAYLGKQRTLSFGAWPDVGLADARERRD 86 Query: 72 DLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYW 104 + RKL +G DP + +M + W Sbjct: 87 EARKLIAAGLDPSHEAKLAEARAMLSEETASSW 119 >UniRef50_B7XGJ8 Integrase n=9 Tax=root RepID=B7XGJ8_PSEPU Length = 419 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 12/121 (9%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++ ++ + P D GL +R+S + +RY + + L LG +P+L Sbjct: 3 KLTPKFVKDV-----DQPGSYQDGRGLILRVSATLRKSWVFRYMLAKQRHDLALGTFPAL 57 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVEN-------SMTVAQCLDYWFDNYVSTTLR 114 SL+DAR R G DP + S T + + + S+ + Sbjct: 58 SLRDARLEADKYRLDIARGVDPAAERAKVKAAKASRTTTSHTFRASAERYIRTHSSSWSK 117 Query: 115 E 115 + Sbjct: 118 K 118 >UniRef50_A5F3U5 Site-specific recombinase, phage integrase family n=5 Tax=Vibrio RepID=A5F3U5_VIBC3 Length = 411 Score = 101 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 3/115 (2%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 + D L+ + K + + D DGL R+S +G +++Q+RY+ +G R+ LG YP L Sbjct: 3 KLYDKHLKAVLNKSHLKVFTLTDGDGLGARVSLQGNVRWQFRYKINGASKRVDLGDYPDL 62 Query: 62 SLKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWFDNYVSTTL 113 SL AR+ R+ G DP+ ++ ++V L+YW Y + Sbjct: 63 SLLKAREEAQKCREWLAEGHDPKLQRSVIRQETLKPVSVQDALEYWLVEYAESNR 117 >UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EVM1_ECOLX Length = 396 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 7/111 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS-- 60 ++DT+LR + KP +V D DGL V ++P G I F+Y Y +G+ + GRY Sbjct: 2 LTDTRLRHL--KPKEKLYKVNDRDGLYVAVTPAGTISFRYNYSINGRQETVTFGRYGVGG 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWFDNY 108 ++L +AR+ + +K+ SG P + +++++ T + W Y Sbjct: 60 ITLAEARERLNEAKKMVASGRSPAREKARDKARIKDAETFGAWAEKWLRGY 110 >UniRef50_B4T1L5 Phage integrase family protein n=12 Tax=Enterobacteriaceae RepID=B4T1L5_SALNS Length = 409 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 3/108 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MAISD+ L++ G+ +E AD DGL VRIS KG + F YR+R+ GK +++ +G YP Sbjct: 1 MAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGNYPE 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYF---EEKVENSMTVAQCLDYWF 105 LK AR+ + G +PR + K+ + T + W Sbjct: 61 FGLKAAREEVTKWAAILARGENPRIRQSLDKAKINSQYTFEELFREWH 108 >UniRef50_D0SZI9 Integrase n=14 Tax=cellular organisms RepID=D0SZI9_ACILW Length = 401 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 10/113 (8%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG--KPNRLGLGRY 58 M++++ K+R K +AD DGLS+++ P G + YRY G K R+ LG Y Sbjct: 1 MSLTEIKVR--QAKSKEKIYFLADDDGLSLKVEPNGRKSWSYRYSLAGTNKRPRMKLGEY 58 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVST 111 P +SLK+AR + + + + P K T + W + + Sbjct: 59 PVMSLKEARSVRDEYKFNNYENK-PLHKKYIK-----TFQDICEEWLEFKIKN 105 >UniRef50_D1D4Y4 Site-specific recombinase n=19 Tax=Neisseria RepID=D1D4Y4_NEIGO Length = 406 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 49/114 (42%), Gaps = 5/114 (4%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 +S +++ KP +++D GL++ + P G ++ + G+ + LGRYP Sbjct: 15 PLSANQVKN--AKPRDKLYKLSDGGGLALWVYPTGRRSWKLSFMQDGRQQTISLGRYPDF 72 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 SL +AR+ ++R+ G + +KV + WF + + Sbjct: 73 SLAEAREWREEVRRKRAHGEN---VVNKKVRADFAFEKVARDWFVRWSKGRSEK 123 >UniRef50_Q1NGR6 Putative phage integrase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGR6_9SPHN Length = 428 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 6/114 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DT +++I P + P + AD GL++ + P G ++ + YR+H K + G YP +S Sbjct: 2 LTDTLIQSII--PAARPIKKADGGGLNICVLPNGRREWCFSYRFHHKQKSITGGDYPLMS 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFE----EKVENSMTVAQCLDYWFDNYVSTT 112 + AR +++ +G DP E T Q W Sbjct: 60 IDRARVWREEMKAALSAGKDPANIKRQLKYEDQAERTTFRQLAYEWMVAKRPGW 113 >UniRef50_A1W6C2 Phage integrase family protein n=8 Tax=Burkholderiales RepID=A1W6C2_ACISJ Length = 459 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++ K+ + S P +D +GL ++I+ V + +RY + +G+G ++ Sbjct: 6 KLTALKVTRL-----SKPGRYSDGNGLYLQITKALVKSWIFRYARGTGEHFMGIGPVHTV 60 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSMT-------VAQCLDYWFDNYVSTTLR 114 +L +AR+ R L G DP + E + + C+D + ++ + Sbjct: 61 NLAEAREQARKARLLLRDGVDPLMHRAEALAKAKAVQASNKIFRDCMDEYIKSHKESWRN 120 Query: 115 E 115 E Sbjct: 121 E 121 >UniRef50_Q483M1 Site-specific recombinase, phage integrase family n=3 Tax=Gammaproteobacteria RepID=Q483M1_COLP3 Length = 390 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 2/114 (1%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA+SDTKLR I PY+G E+AD DGLSVR+SPK +I F YR+RW GK R+ LGRYP Sbjct: 1 MALSDTKLRKIKA-PYNGEAELADRDGLSVRVSPKALITFNYRFRWEGKQQRIKLGRYPG 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 L L DAR+ + R G DPR E +++ + + YV T LR Sbjct: 60 LKLIDARKKVNEYRHNLDEGLDPRVVQNESRSHNL-FGDMCEAFMTKYVMTELR 112 >UniRef50_C6RSU9 Phage integrase family protein n=3 Tax=Acinetobacter RepID=C6RSU9_ACIRA Length = 426 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 51/123 (41%), Gaps = 14/123 (11%) Query: 1 MAISDTKLRTI-------YGKPYSGPQEVADADGLSVRISPKGVIQFQYRYR--WHGKPN 51 ++++D+K++ ++D GL++ I G + +++ Y K N Sbjct: 6 ISLTDSKIKAFLRDIKSNNPNGLQKDIRLSDGAGLNLLIRKNGTVMWRFDYTRPVSKKRN 65 Query: 52 RLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYF-----EEKVENSMTVAQCLDYWFD 106 + +G YP++SL AR+ R L G DP+ +E+++ T + + Sbjct: 66 TMTVGNYPAMSLAKAREYRDQFRALLAEGKDPQVEKQGVEEKERLKQQATFKSVAELYKS 125 Query: 107 NYV 109 Sbjct: 126 KQR 128 >UniRef50_Q7MPT5 Site-specific recombinase, phage integrase family n=14 Tax=Gammaproteobacteria RepID=Q7MPT5_VIBVY Length = 434 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 4/114 (3%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++ ++ + P++ +D +GL + +G + RY LG++P + Sbjct: 21 KLTAKQV---IAYSKADPKKYSDGEGLYFCVRKQGSPYWMIRYTTAKGRREATLGQFPLM 77 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEE-KVENSMTVAQCLDYWFDNYVSTTLR 114 SL DAR A RK G DP ++ ++ + TV Q W+ +S L+ Sbjct: 78 SLADARIAAAYFRKEVRDGIDPLLEKQKIELPDIETVDQLFHDWYRTDLSRRLK 131 >UniRef50_C8Q072 Phage integrase family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q072_9GAMM Length = 402 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 11/123 (8%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRY--RWHGKPNRLGLGRYP 59 ++ T++ KP P + D +GL + ++ G + +Y + K + + LGRYP Sbjct: 7 PLTTTEIEK--AKPQDKPYRLYDGEGLLLNVASSGTKTWYLQYSKPFTKKKDMVNLGRYP 64 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTY-----FEEKVENSMTVAQCLDYWF--DNYVSTT 112 +++L DAR+ ++L DP+T+ ++ E+ + W Y T Sbjct: 65 TVNLADARKQKNYCQELLSKDIDPKTHFEEEARRKEYEHRTDFKSVFEEWLPTKKYAPKT 124 Query: 113 LRE 115 + + Sbjct: 125 VEK 127 >UniRef50_A0Q3W3 Phage integrase n=8 Tax=Francisella RepID=A0Q3W3_FRATN Length = 413 Score = 99.9 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 13/122 (10%) Query: 1 MA--ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRY 58 MA ++ +KL+++ K + D +GL +++S G +Q+RY K LG+G Y Sbjct: 1 MAKTLTASKLQSL--KATGKDYRLNDGNGLYIKVSKAGSKSWQFRY----KGKWLGIGSY 54 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEE-KVENSMTVAQCLDYWFDNYVST----TL 113 P++SLK AR ++ G DP+ E+ K +++ + F+ + Sbjct: 55 PAISLKQARDEAFKYNQMLAGGKDPKLEKEKGKYQDNNLFSIVSAKAFETKDPSKPYGWK 114 Query: 114 RE 115 E Sbjct: 115 SE 116 >UniRef50_D1AZM1 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZM1_SULD5 Length = 416 Score = 99.9 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 9/115 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG--KPNRLGLGRYPS 60 ++D +++ KP P +D +GL + I P G +++ Y K + G YP Sbjct: 9 LTDKEIKNF--KPEDKPYIKSDINGLRILIHPDGRKIWEFVYTSPTLYKKRKSTFGTYPK 66 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVS 110 +LK+AR L G DP E+ + + ++ WF + S Sbjct: 67 TTLKEARDKRETYLNLIKQGIDPIDAQREEKAEVKLQKESDFSNVVNLWFQSQES 121 >UniRef50_Q2T3P2 Integrase n=31 Tax=pseudomallei group RepID=Q2T3P2_BURTA Length = 409 Score = 99.5 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 13/125 (10%) Query: 1 MA---ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRW-HGKPNRLGLG 56 M + D + R+ KP ++D GL++ + P G+ +Q+RY G+ + +G Sbjct: 1 MPESLLRDLQCRS--AKPRERVYRLSDGGGLALLVKPNGLKYWQFRYMKPDGREGLIQIG 58 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKV-------ENSMTVAQCLDYWFDNYV 109 YP ++L+ AR + R G DP T +++ ++ QC + + Sbjct: 59 PYPRITLEAARAARNEHRVAVQGGDDPATLRKQEKARRKIDAARALNFKQCATAFIEARS 118 Query: 110 STTLR 114 + + Sbjct: 119 AEWVN 123 >UniRef50_A4N808 DNA polymerase III subunit delta n=4 Tax=Haemophilus influenzae RepID=A4N808_HAEIN Length = 223 Score = 99.5 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 8/116 (6%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH--GKPNRLGLGRYP 59 +D+ + I KP Q +D D L + + P G +++ Y K + G YP Sbjct: 8 KFTDSYIHGI--KPTDKEQLFSDRDNLYLLVKPTGAKIWRFIYTHPTTKKRIKKSFGNYP 65 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTY----FEEKVENSMTVAQCLDYWFDNYVST 111 S+ L AR+ +L DP EEK + S+T + W D + Sbjct: 66 SILLAFAREKARIWCRLLAQNIDPAEEECMQQEEKEKKSVTFKELAMLWRDKRLKK 121 >UniRef50_D1Y3S1 Site-specific recombinase, phage integrase family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3S1_9BACT Length = 433 Score = 99.1 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 9/114 (7%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHG-KPNRLGLGRYP 59 MA++ T + GK P + D GL +++ P G + YRYR G + ++ LG YP Sbjct: 1 MALNITAIERSTGK--DAPYLLNDGGGLYLKVCPNGRKVWLYRYRDEGERERKVTLGEYP 58 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTL 113 +L + AR+ R G P + +T Q W++ L Sbjct: 59 ALDMAAARERKEATRARILRGEAP------QDTALLTFEQVARRWYEKQKKRGL 106 >UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KUI7_METC4 Length = 414 Score = 98.7 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 46/122 (37%), Gaps = 9/122 (7%) Query: 1 MA-ISDTKLRTIYGKPYSGPQEVADA--DGLSVRISPKGVIQFQYRYRWHGKPNRLGLGR 57 MA ++ + P +EV DA GL + + P G + RYR GKP +L LG Sbjct: 1 MAVLTARAVELAKPDPG-KRREVPDAALPGLYLVVQPAGGKSWAVRYRAAGKPRKLTLGP 59 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYFEEKV-----ENSMTVAQCLDYWFDNYVSTT 112 YP L L DAR+ G DP + +M + + Y Sbjct: 60 YPRLGLADAREAARTALHAVAEGRDPAGEKQAARVEVAAVQTMRFGAVAADYIERYAKPR 119 Query: 113 LR 114 R Sbjct: 120 NR 121 >UniRef50_B8J346 Putative phage integrase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J346_DESDA Length = 208 Score = 98.3 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 23/137 (16%) Query: 1 MAISDTKLRTIYGKPYSG-----PQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGL 55 MA++ ++ K P +++D +GL + ++ + ++ RY + GK L L Sbjct: 1 MALTIKEIEAAKPKTNKKTGKQAPVKLSDENGLMLFVTSQ-NKIWRARYFYMGKEQNLTL 59 Query: 56 GRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-----------------TVA 98 G+YP +SLK+AR+ LR+ G +P + K E + + Sbjct: 60 GKYPLMSLKEAREANFALRQQLDRGENPAKAKKAKQEEQLAVFAEERRIARGESHPDSFG 119 Query: 99 QCLDYWFDNYVSTTLRE 115 + W + R Sbjct: 120 AIAEDWLSDVKKGWKRR 136 >UniRef50_A8EUF6 Putative phage integrase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EUF6_ARCB4 Length = 405 Score = 98.3 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 44/112 (39%), Gaps = 2/112 (1%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++DT+++ +++D + L + + G F++ + + K + G YP + Sbjct: 7 PLTDTEIKKAKA--KEKDYKLSDGENLYLVVKSNGTKFFRFDFSYTKKRKSMSFGIYPDI 64 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTL 113 SLK+AR++ ++ +P N T + W S Sbjct: 65 SLKEARELREKAKEQLKQNINPIEAKSSNFGNISTFKYITEKWLKLMTSEWK 116 >UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas putida RepID=B0KFC6_PSEPG Length = 436 Score = 98.0 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 14/125 (11%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRIS------PKGVIQFQYRYRWHGKPNRLGL 55 +SD +R++ SG D GL +++ ++ +YR GK N + Sbjct: 26 KLSDAFIRSLT---TSGKYADGDVPGLYLQVRASLKPGKSPSRHWRLKYRLRGKENVYVI 82 Query: 56 GRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-----SMTVAQCLDYWFDNYVS 110 GRYP + LK+AR++ R + DP + K+E + T A + W + Sbjct: 83 GRYPDVGLKEARELARAARNSVANHIDPLKAKKAKIEAQWLNEARTFAYVAEEWMKFKSA 142 Query: 111 TTLRE 115 + + Sbjct: 143 DLVSK 147 >UniRef50_A1AQ50 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQ50_PELPD Length = 427 Score = 98.0 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 7/117 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGL--GRYPS 60 +D + ++ KP + G S+R+ P G + + Y + G+ + L G YP Sbjct: 7 FTDKFIMSL--KPADKEYWKREGQGFSIRVYPSGEKAWYFIYTFDGRKKYMRLKDGGYPD 64 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEK---VENSMTVAQCLDYWFDNYVSTTLR 114 +SL DAR+ + +G DP E+ +++ V + +D + Y R Sbjct: 65 VSLADAREAFDIAKVKLKNGIDPLAELEQARLDRKHTPFVKEFVDEFIRIYCKENNR 121 >UniRef50_B1JMJ4 Integrase family protein n=2 Tax=Enterobacteriaceae RepID=B1JMJ4_YERPY Length = 407 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 6/120 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPN---RLGLGRY 58 +SD KL++++ + AD GLS ++S +G I + + YR G+ + RL GRY Sbjct: 6 KLSDKKLKSLHCINSDSVKMFADGAGLSAKVSAQGSISWVFTYRLGGRESKLERLVFGRY 65 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWFDNYVSTTLRE 115 P ++LK AR R G DPR E V ++ TV L YW DNY T + Sbjct: 66 PDMTLKAARDRRDQCRTWLAGGCDPRRQLLEDVTQTLKPVTVKDALLYWVDNYAQTNRSD 125 >UniRef50_B5EWV2 Integrase n=2 Tax=Gammaproteobacteria RepID=B5EWV2_SALA4 Length = 102 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 2/94 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++DT +R I KP ++ D+ GL + I P G + +YR GK +L G YP Sbjct: 1 MALTDTAIRKI--KPTEKSFKITDSAGLYLLIKPNGSKLWYMKYRVDGKEKKLAFGPYPD 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENS 94 +SL ARQ+ R G DP + + Sbjct: 59 VSLFKARQLRDAARARVREGADPAADKKIAQQKK 92 >UniRef50_C6N3S0 Putative phage integrase family protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N3S0_9GAMM Length = 397 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 6/114 (5%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGV---IQFQYRYRWHGKPNRLGLGRYP 59 +SD+ +R++ K D DGL + + P F +R++W KP + +G Y Sbjct: 2 LSDSLIRSL--KLGDKK-RHTDRDGLVLELRPSKKQLKKIFIFRFQWDKKPQTITIGDYR 58 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTL 113 S+ L AR I R + SG DPR+ E + +T D WF Y T Sbjct: 59 SVGLGAARDIALAYRNMVNSGIDPRSKNVEADQEKITFEVVADQWFQKYKGTWK 112 >UniRef50_D2LKM4 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKM4_RHOVA Length = 423 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 12/123 (9%) Query: 1 MAISDTKLRTIYGKPYSGPQEVAD-ADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 + +S + + KP EV+D GL V + P G F RYR + ++ LG Sbjct: 3 IKLSSLSVTAL--KPKEKRYEVSDMETGLGVVVQPSGAKSFVVRYRLGKRLGKVTLGSAS 60 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMT---------VAQCLDYWFDNYVS 110 ++L AR+ L G DP + + + + + + +VS Sbjct: 61 DITLAAAREQARQTMALVRQGIDPAEHRKTEKAARIAAEEERKDSLFEIVAEDYIRRHVS 120 Query: 111 TTL 113 T Sbjct: 121 TLK 123 >UniRef50_P39347 Putative prophage P4 integrase n=97 Tax=Enterobacteriaceae RepID=INTB_ECOLI Length = 396 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Query: 28 LSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYF 87 + + + P G ++ +YR+ GK L LG YP ++L DAR + RKL +G DP Sbjct: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 Query: 88 ---EEKVENSMTVAQCLDYWFDNYVS 110 + + + T + W Sbjct: 61 KNDKVEQSKARTFKEVAIEWHGTNKK 86 >UniRef50_B9D1P3 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter rectus RM3267 RepID=B9D1P3_WOLRE Length = 395 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 6/113 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRW--HGKPNRLGLGRY 58 + ++D ++R + KP + D GL + + P G F Y+ K RL LG + Sbjct: 6 IPLTDREIRGL--KPKDKIYKKCDGRGLYIFVDPSGRKYFALEYKSPADNKIKRLNLGDF 63 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVST 111 P SL AR+ L + G D + E + + + W + ++ Sbjct: 64 PEFSLAMAREERFKLEQKVRDGIDVKHESEINEQAN--FKKLAQRWLEIKAAS 114 >UniRef50_B5JZM6 Site-specfic recombinase, phage integrase family n=2 Tax=Rhodobacteraceae RepID=B5JZM6_9RHOB Length = 411 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 1/111 (0%) Query: 5 DTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLK 64 + L + + + P + D GL +++ G ++ R GK +GLG +SL Sbjct: 22 NKALSAAFVRTATTPGKYNDGHGLFLKVVTSGAKRWVQRIVVRGKRTEIGLGSASLVSLA 81 Query: 65 DARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 +AR+ + RKL +G DP E +T + + T + Sbjct: 82 EARETALENRKLARAGGDPLQAKRT-SEALLTFEEASRKVHKIHEPTWRNK 131 >UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE42_ECOK1 Length = 418 Score = 97.2 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 7/110 (6%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS-- 60 ++DTKL+ + KP +V+D DGL V + G + F+Y YR +G+ L +G+Y Sbjct: 2 LTDTKLKNL--KPQDKLYKVSDRDGLYVAVLTSGTVSFRYDYRINGRRETLVIGQYGRDG 59 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFE---EKVENSMTVAQCLDYWFDN 107 +SL +AR+ +KL +G P +K+ + T A D + + Sbjct: 60 ISLAEAREELIAAKKLLKAGQSPAAAKRDGIKKIRGAETFAVHTDSYMKH 109 >UniRef50_Q2NDX8 Site-specfic recombinase, phage integrase family protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NDX8_ERYLH Length = 396 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 3/111 (2%) Query: 7 KLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDA 66 KL + K +D +GL + + G + R + GK +GLG + +A Sbjct: 14 KLTAVKAKAIKEAGRYSDGNGLQLVVKASGAKSWILRVQHDGKRRDIGLGPLSEVGPAEA 73 Query: 67 RQITADLRKLYFSGTDPRTYFEEKVE---NSMTVAQCLDYWFDNYVSTTLR 114 R+ + RK+ G DP T + + D++ S+ Sbjct: 74 REKAVEARKVIRGGGDPSGLKSGSGRISGRPPTFRELATSYHDDHKSSWKN 124 >UniRef50_C3MAV8 DNA integration/recombination/invertion protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MAV8_RHISN Length = 429 Score = 96.4 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 4/114 (3%) Query: 2 AISDTKLRTIYGKPYSGPQEVADA--DGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 ++ + I K S +E+ D GL + + GV + RYR GKP ++ LG +P Sbjct: 6 PLTVKSIEAI--KAGSSRREIPDGALQGLYLIVQTTGVKSWAVRYRHAGKPRKMTLGGFP 63 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTL 113 ++SL DAR+ ++ G DP T E+ + D +V+ + Sbjct: 64 AISLSDAREEARKALRMVSEGRDPATEKAEQEPKRPAHMDLMPALLDEFVTRHV 117 >UniRef50_Q0I233 Phage integrase n=5 Tax=Pasteurellaceae RepID=Q0I233_HAES1 Length = 434 Score = 96.4 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 6/94 (6%) Query: 20 QEVADADGLSVRISPKGVIQFQYRYR--WHGKPNRLGLGRYPSLSLKDARQITADLRKLY 77 + D +GL + + G +++ Y + K + +G+YP +SL AR+I + L Sbjct: 42 YPLRDGNGLFLSVEISGSKIWRFNYYKPYTKKRTEISIGKYPEISLLQARKIRDEYLALL 101 Query: 78 FSGTDPRTYFEEKVE----NSMTVAQCLDYWFDN 107 DP+T+ ++K T W+ Sbjct: 102 AQNIDPKTHRDQKQNTQALERNTFKYVCAKWYAE 135 >UniRef50_Q083S5 Phage integrase family protein n=3 Tax=Shewanella RepID=Q083S5_SHEFN Length = 403 Score = 96.4 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 49/115 (42%), Positives = 71/115 (61%), Gaps = 2/115 (1%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M++SDT+LR+I GKPY+G E+AD DGLSVRIS G I +QYR+R+ RL LGRYP Sbjct: 1 MSLSDTQLRSINGKPYTGKPEIADRDGLSVRISNAGTITWQYRFRFRSSVGRLTLGRYPD 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEK--VENSMTVAQCLDYWFDNYVSTTL 113 + L +AR+ +LR + TDPR Y++++ + V C + + S+ Sbjct: 61 VKLSEARKFVPELRNALANDTDPRVYWKQRNTRRGKVNVRYCCEQFLLKQGSSLK 115 >UniRef50_C8PFJ4 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFJ4_9PROT Length = 383 Score = 96.0 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 14/114 (12%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++ T+L+ + KP P V D L ++I P G F Y Y+ K R+ +GR + Sbjct: 7 PLTATQLKNL--KPKDKPYFVGDGSNLLIKIMPSGAKFFIYEYKQGAKYKRVTIGRAGEM 64 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 SL +ARQ ++L+ K + +T + + W + ++ Sbjct: 65 SLAEARQRKSELKTRV------------KTSDKITFREVFEEWIKTKSKISPKQ 106 >UniRef50_Q1GLB2 Phage integrase n=12 Tax=Rhodobacterales RepID=Q1GLB2_SILST Length = 411 Score = 95.6 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 52/115 (45%), Gaps = 5/115 (4%) Query: 2 AISDTKLRTIYGKPYSGPQEVADAD--GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 ++ + + P + + D+ G VR+ P G +Q +YR G+ R+ +GR+ Sbjct: 22 KLTKRTVEALM--PEAKDYFLWDSQIAGFGVRVMPSGAKTYQAQYRKGGRTRRVSVGRHG 79 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 +++ +AR++ ++ G +P + + TVA + +F+ + + Sbjct: 80 KITVDEARKLAKEIMGQVAKGENPAEEI-SQHRKAPTVAALCERFFEAHAKERCK 133 >UniRef50_C8PUK8 Phage integrase family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PUK8_9GAMM Length = 446 Score = 95.3 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 9/111 (8%) Query: 5 DTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH--GKPNRLGLGRYPSLS 62 D ++ K +A GL +RI P G +F++RY GK + LG YP+ S Sbjct: 13 DKFIKAGVSK--DTSYPIAGFKGLELRIRPNGKAEFRHRYTHPYTGKRPYMTLGSYPAFS 70 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENS-----MTVAQCLDYWFDNY 108 L A+Q D L DP T+ E++ T W + Sbjct: 71 LAQAKQAYNDNMALLAQTIDPLTHKEQENAKQAYALDNTFEAVAKDWLNEQ 121 >UniRef50_A7IMK8 Integrase family protein n=39 Tax=Bacteria RepID=A7IMK8_XANP2 Length = 467 Score = 95.3 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 6/117 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADA--DGLSVRISPKGVIQFQYRYR-WHGKPNRLGLGR 57 + ++ T + P E+ D G V+I+P G F Y +G+ + +GR Sbjct: 4 IKLTKTAVDA--ANPQERDYELRDTTIPGFLVKITPTGRKTFMIAYVANNGQRRKPAIGR 61 Query: 58 YPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 Y ++++ AR+I D G DP + TV + D + +Y + + Sbjct: 62 YGEITVEQARRIAQDWLAEVRRGADPSAERTA-SRQAPTVKELFDRFITDYSESRNK 117 >UniRef50_B5BIF0 Integrase n=7 Tax=Salmonella enterica subsp. enterica RepID=B5BIF0_SALPK Length = 133 Score = 94.9 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 3/100 (3%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++DTKLR GK + ++DA GL+VR+S G I F YRYRW+G +L +G YP++S Sbjct: 16 LADTKLRKAPGKKRDQIKVISDAHGLNVRLSTSGSITFFYRYRWNGNAAQLTIGDYPTIS 75 Query: 63 LKDARQITADLRKLYFSGTDPRTY---FEEKVENSMTVAQ 99 L AR+ R G DPR ++K ++TV + Sbjct: 76 LSHARERRQYFRSWLTEGLDPRRQMVLEKKKKTEALTVKE 115 >UniRef50_B0U0U5 Phage integrase n=1 Tax=Francisella philomiragia subsp. philomiragia ATCC 25017 RepID=B0U0U5_FRAP2 Length = 398 Score = 94.9 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 4/113 (3%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +++TK++ I K Q V D GL +R+ G +Q R+ + K GLG YPS + Sbjct: 2 LTETKIKKI--KATGKEQRVIDTLGLYLRVDKNGNKTWQLRHTINEKRKWFGLGSYPSTN 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 L +AR+++A+LR+ +G D + + + V + + + + E Sbjct: 60 LNEARKLSAELRERIDNGEDILA--KPDAKKVIYVKDLVAQYIEFQKKNSSSE 110 >UniRef50_A4A7S2 Phage-related integrase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A7S2_9GAMM Length = 412 Score = 94.5 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 15/113 (13%) Query: 18 GPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLY 77 DA+GL + ++ G + YRY+ G+ LGLG YP++SL AR R Sbjct: 18 RRGRHLDAEGLYLLVARGGSKNWIYRYQHEGRRRELGLGGYPAVSLAKARMRRDAARDQR 77 Query: 78 FSGTDPRTYF---------------EEKVENSMTVAQCLDYWFDNYVSTTLRE 115 G DP E+ +MT + D + DN + Sbjct: 78 QQGHDPLEVRDRQRAQLRAQMAAETAERERAAMTFLRVADEFIDNNAAGWTNR 130 >UniRef50_B0SXU9 Integrase family protein n=6 Tax=Proteobacteria RepID=B0SXU9_CAUSK Length = 399 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 1/115 (0%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M S KL I P +D GL + I G ++ + Y K LGLG Sbjct: 1 MGRSLHKLTAIQAAKLKVPGRHSDGGGLYLSIDDGGRRRWVFIYTRGAKRTELGLGGGRD 60 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 LSL +AR A R + G DP+ + + + T C D + + + E Sbjct: 61 LSLANARVEAAAFRTMLADGLDPKVER-ARDDQAQTFGACADAYVEAMRPSWRNE 114 >UniRef50_D0T0P6 Prophage Sf6-like integrase (Fragment) n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0T0P6_ACILW Length = 137 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 4/114 (3%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 ++ ++ I P + + D++ L + + G ++ Y ++GK N LG YP S Sbjct: 2 LTIKQIEAIQPIP-NKIVKNFDSELLYLFTAQTGRKTWKVIYTFNGKKNTTTLGEYPLFS 60 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEE---KVENSMTVAQCLDYWFDNYVSTTL 113 K+AR +++K G DP +E + +++T A+ ++ + + T Sbjct: 61 AKEARLKRDEIKKQIAEGIDPNQKKKEDRVQKLSTITFAELINKYIHDVAPTMK 114 >UniRef50_Q7MDZ9 Phage integrase n=2 Tax=Vibrio RepID=Q7MDZ9_VIBVY Length = 422 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 2/110 (1%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D LR GKPYSG E+ +GL VRISPKG I + YR + GKP ++ +G YP Sbjct: 1 MKLTDAWLRAHAGKPYSGKAEITYKNGLGVRISPKGKITWIYRALFKGKPIKMKIGEYPL 60 Query: 61 LSLKDARQITADLRKLYFSGTDPR--TYFEEKVENSMTVAQCLDYWFDNY 108 + +K+A + +L G DPR + +TV+Q ++++ +N Sbjct: 61 MKIKEATEERDRFFELIQQGVDPRNKSILILNSNAPVTVSQVVEHYIENQ 110 >UniRef50_A6FPT0 Site-specfic recombinase, phage integrase family protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FPT0_9RHOB Length = 245 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 6/113 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++ +R GP D GL +++ P ++ R G+ GLG + Sbjct: 22 KLNAAFVRKA------GPGRHTDGGGLYLKVDPSSARRWILRTVVRGRRRDFGLGSANLV 75 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 SL +AR+ +LR++ SG +P+ E + T + + Sbjct: 76 SLAEAREKAFELRRVARSGGNPKVRTREDEGKATTFEEIARQVHNRKFKDNKN 128 >UniRef50_Q2N8A1 Symbiosis island integrase n=12 Tax=Bacteria RepID=Q2N8A1_ERYLH Length = 409 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 7/119 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M ++D +R P +++D+ GL + + G ++ +YR G+ +L +GRYP Sbjct: 1 MVLTDVGIRKAKAGP--KAYKLSDSSGLFLLVERTGGKLWRMKYRIDGREKKLAIGRYPE 58 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVE-----NSMTVAQCLDYWFDNYVSTTLR 114 + L +AR+ R+ G DP + + A + + R Sbjct: 59 IGLAEARRRRDAAREQLAQGKDPSREKQRQKARAKLGAENNFASLAAEFCEKRKHDGSR 117 >UniRef50_A4Y9I4 Phage integrase family protein n=3 Tax=Shewanella RepID=A4Y9I4_SHEPC Length = 432 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 5/106 (4%) Query: 4 SDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRL--GLGRYPSL 61 +D ++++ K A DGL +R+ +GV ++ RY +GK + G YP++ Sbjct: 12 NDKQIKSFL-KSKE-LGRKAVGDGLYIRVQTEGVAYWEVRYSVNGKRRSMVPNGGVYPAM 69 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSM-TVAQCLDYWFD 106 SL +A+ A ++ L G DP E + E ++ TV D W+ Sbjct: 70 SLVEAKAEAAKVKLLAKQGIDPLAERERQQEITIKTVNDLFDDWYQ 115 >UniRef50_A1U0R6 Phage integrase family protein n=2 Tax=Gammaproteobacteria RepID=A1U0R6_MARAV Length = 432 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 14/126 (11%) Query: 3 ISDTKLRTIYG-------KPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGL 55 +S +++ + + V GL +RI+P G Q+ R + + +GL Sbjct: 8 LSALEVKRLTCRIDPETGEATEVRYPVGGVSGLLLRITPSGSRQWILRAKVGNRRPDMGL 67 Query: 56 GRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-------SMTVAQCLDYWFDNY 108 G YP +SL AR ++++ SG DP ++T + ++ + Sbjct: 68 GPYPEISLAQARDKAREMKEKIRSGIDPLEEKRTLKRALLAEQISTLTFQKAMEKYIKMK 127 Query: 109 VSTTLR 114 Sbjct: 128 AKEFRN 133 >UniRef50_Q1GUV7 Phage integrase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GUV7_SPHAL Length = 403 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 5/115 (4%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++ ++ P D DGL +++ G + R + GK +GLG + Sbjct: 3 KLTAVAVKAALANPG----TYQDGDGLFLKVGKTGAASWLLRLQRDGKRQDIGLGSAKLV 58 Query: 62 SLKDARQITADLRKLYF-SGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 +L +AR A+LRK D T +++ +T + + + + Sbjct: 59 TLAEARAKAAELRKAVKVEKRDVLTERKDEEAAKVTFREAATQYHSENEAGWKSD 113 >UniRef50_A4SIA1 Phage integrase family protein n=2 Tax=Gammaproteobacteria RepID=A4SIA1_AERS4 Length = 408 Score = 92.6 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 48/123 (39%), Gaps = 11/123 (8%) Query: 3 ISDTKLRTIY-----GKPYSGPQEVADADGLSVRI-SPKGVIQFQYRYRWHGKPNRLGLG 56 + + + K GL + +G +F RY WHG+ + +G Sbjct: 10 FTQKAIEALPPNPANAKSTEAEYSDTQISGLKCLVGKGEGNKKFLMRYLWHGRKRAIAIG 69 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDY----WFDNYVSTT 112 R+P + L AR+I + ++L G DP+ +E +T+ + + ++ + Sbjct: 70 RFPDVDLNTAREIATEYKRLLSQGIDPK-QLKEDKRQELTLYELFQLHYLPYAKHHKRSW 128 Query: 113 LRE 115 + Sbjct: 129 QND 131 >UniRef50_D1DCL4 Predicted protein n=8 Tax=Neisseria gonorrhoeae RepID=D1DCL4_NEIGO Length = 356 Score = 92.6 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 3/105 (2%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++ ++ K ++AD GL + + P G ++ RYR G L LG YP++ Sbjct: 6 KLTQKQIEA--AKADGKQSKLADGGGLYLLLHPNGSKYWRMRYRHGGCEKTLALGVYPAV 63 Query: 62 SLKDARQITADLRKLYFSGTDP-RTYFEEKVENSMTVAQCLDYWF 105 SLK AR++ R +G DP + + + ++ + W+ Sbjct: 64 SLKQARELARAARAQTAAGIDPVAEHHRTRPGSGRSLPEIARAWY 108 >UniRef50_C6V8W5 Integrase n=4 Tax=Enterobacteriaceae RepID=C6V8W5_ECOBD Length = 294 Score = 92.6 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%) Query: 30 VRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEE 89 + + P ++ RYR GK L LG YP +SL +AR + RKL +G DP Sbjct: 3 MLVHPNSSRYWRLRYRILGKEKTLALGVYPEVSLSEARAKRDEARKLISAGIDPCEQKRA 62 Query: 90 KV---ENSMTVAQCLDYWFDNYV 109 K + ++ W + Sbjct: 63 KKVVPDLQLSFEHIARRWHASNK 85 >UniRef50_A7FP63 Site-specific recombinase, phage integrase family, truncation n=3 Tax=Enterobacteriaceae RepID=A7FP63_YERP3 Length = 90 Score = 92.6 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 M +SD ++R KP ++D GLS+ I P G +++RYR+ GK + LG Y Sbjct: 1 MPLSDRQIR--RAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDL 58 Query: 61 LSLKDARQITA 71 +SL +AR Sbjct: 59 VSLAEARCKRN 69 >UniRef50_B0VTB2 Putative prophage integrase n=1 Tax=Acinetobacter baumannii SDF RepID=B0VTB2_ACIBS Length = 388 Score = 92.2 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 12/113 (10%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD +++++ KP VAD +GL++ + P G ++ YR +GK N+ LG YP + Sbjct: 2 LSDAQVKSL--KPKESRYSVADGEGLNISVFPNGKKKWVLSYRQNGKQNQKMLGEYPVMG 59 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 K+AR L+ ++ KV NS V + ++ W S + Sbjct: 60 CKEARLQARQLK----------LEYQGKVANSPPVHKVIEEWLSIMKSQWTSK 102 >UniRef50_B4W813 Site-specific recombinase, phage integrase family protein n=2 Tax=Brevundimonas RepID=B4W813_9CAUL Length = 525 Score = 92.2 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 8/108 (7%) Query: 4 SDTKLRTIYGKPYSGPQ--EVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGL-GRYPS 60 +D +L + KP V+ A GLSVR+ P G+ QF+ RY G P R + G YP+ Sbjct: 8 TDRQLAGL--KPLDKRYERRVSGARGLSVRVWPSGLTQFEVRYAVGGGPRRRTILGDYPA 65 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSM---TVAQCLDYWF 105 +SL DAR+ LR G DP + T+ Q + ++ Sbjct: 66 VSLADAREKATALRLDVLKGVDPVAERIAAQRPAPPQETLDQVAETYW 113 >UniRef50_B9R123 Site-specific recombinase, phage integrase family protein n=3 Tax=Alphaproteobacteria RepID=B9R123_9RHOB Length = 451 Score = 91.8 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 47/122 (38%), Gaps = 9/122 (7%) Query: 3 ISDTKLRTIYGKPYSGPQEVADAD--GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 ++ +++ + G + GL++++ G + R K +GLG YP Sbjct: 29 LTPLEVKRLKNSGRGGNELHFVGGVSGLAIQLLSSGGKTWILRTTVGYKRRDIGLGGYPD 88 Query: 61 LSLKDARQITADLRKLYFSGTDPRTYFEEKVEN-------SMTVAQCLDYWFDNYVSTTL 113 +SL AR+ + ++L G DP + + ++ + +D + + Sbjct: 89 VSLAQARERARETKELIRQGVDPIEHRKSLQSQLVASQMRGLSFSDAVDRYLSVKSAELR 148 Query: 114 RE 115 E Sbjct: 149 NE 150 >UniRef50_B6B4D0 Integrase n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B4D0_9RHOB Length = 113 Score = 91.8 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 ++D++LR + KP Q++ D GL+ + P G + + YRW+GK + G YP Sbjct: 3 KLNDSQLRKL--KPTEKTQKIGDGLGLTFVLKPNGSRYWHFNYRWYGKQRTISFGTYPET 60 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFE 88 SLK AR + R+ DP + Sbjct: 61 SLKSARDQRTEAREFLAQKIDPSAERK 87 >UniRef50_D1ZVQ9 Whole genome shotgun sequence assembly, contig_309 (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZVQ9_SORMA Length = 214 Score = 91.4 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 22/116 (18%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGK------PNRLGLG 56 ++D K++ KP ++ D+ L + ++P G ++ Y + L G Sbjct: 35 LTDAKIKA--AKPRETAYKMVDSAQLFLHVTPAGGKHWRMNYTFGKNAAGKPAQKTLTFG 92 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTT 112 YP ++L +ARQ + L G DP WF+ + Sbjct: 93 PYPGVTLVEARQKRDAAKALLRDGRDPAI--------------VARRWFELRKAIW 134 >UniRef50_Q5LS43 Site-specfic recombinase, phage integrase family n=4 Tax=Rhodobacterales RepID=Q5LS43_SILPO Length = 406 Score = 91.0 bits (225), Expect = 9e-18, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 6/114 (5%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSL 61 A+S +RT+ P + D GL +++ G ++ R GK +G+G + Sbjct: 20 ALSAAFVRTVT-----KPGKYTDGHGLFLKVDDTGAKRWVQRIVIRGKRTEIGMGSASLV 74 Query: 62 SLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLRE 115 SL +A + RKL +G DP + +T + + T + Sbjct: 75 SLAEASETALQNRKLARAGGDPLQAKRTA-QALLTFEEAARKVHKIHEPTWRNK 127 >UniRef50_D1UTM5 Integrase family protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UTM5_9BURK Length = 425 Score = 91.0 bits (225), Expect = 9e-18, Method: Composition-based stats. Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 3/106 (2%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLS 62 +SD +LR P D GL+ +S G + R+R GKP L LGRYP L+ Sbjct: 9 LSDLELRRWIR--ERRPLARTDGGGLTFTLSATGTASWILRFRIGGKPEELTLGRYPDLT 66 Query: 63 LKDARQITADLRKLYFSGTDPRTYFEE-KVENSMTVAQCLDYWFDN 107 L AR++ A+ R G +P T + K + TV Q + + + Sbjct: 67 LSAARKLAAEKRVEVQKGNNPATEKRKDKSRKNWTVRQLVSDYREK 112 >UniRef50_Q0EWR9 Integrative genetic element Gsu32, integrase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWR9_9PROT Length = 391 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 7/118 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADAD--GLSVRISPKGVIQFQYRYRWHGKPNRLGLGRY 58 M +D +++I P EV + G +VR+S G F + Y+ +G+ RL G Y Sbjct: 1 MKFTDRSIKSIR--PTGKRFEVRETGRTGFAVRVSTTGTKTFVFIYKINGQKKRLSFGTY 58 Query: 59 PSLSLKDARQITADLRKLYFSGTDPRTYFEEKVE---NSMTVAQCLDYWFDNYVSTTL 113 P++SL +A + + + G DP +K + N +T+ + + + + Y Sbjct: 59 PAMSLNEAHLLYEEAKLELEKGNDPALIKAKKSQLEKNEVTIPELIKLYINQYAKVRK 116 >UniRef50_Q5ZWK0 Phage related integrase n=15 Tax=Proteobacteria RepID=Q5ZWK0_LEGPH Length = 414 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 7/117 (5%) Query: 1 MAISDTKLRTIY-------GKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRL 53 M I+ T + + GK + G +R++ G F + K R+ Sbjct: 1 MKINKTNVENLPLPQAMEAGKTAQKRYYDDNLKGFGIRVTSGGAKAFFVEKFINKKRCRI 60 Query: 54 GLGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVS 110 LG YP L+ + A+ L G DP + +T+ Q + + Sbjct: 61 TLGHYPELTAEMAKNKALHLLGQIAMGIDPIAEKKATEVRDITLNQVFKDYLRTRKN 117 >UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria RepID=Q3SF40_THIDA Length = 440 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 6/113 (5%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWH-GKPNRLGLGRYP 59 MA+SD+KLRT+ KP +D GL + I P G ++ +YR GK + LG YP Sbjct: 1 MALSDSKLRTL--KPADRVFSESDGGGLYIEIMPTGKRRWGLKYRIPTGKQETIRLGDYP 58 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEK---VENSMTVAQCLDYWFDNYV 109 + SL DAR D + L G P + + + ++ N+ Sbjct: 59 AYSLADARTWRDDCKALAGRGLSPMALKRGDPIPEDAAPAAKELAQFFIRNWC 111 >UniRef50_Q39TC0 Phage integrase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TC0_GEOMG Length = 414 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 15/125 (12%) Query: 3 ISDTKLRTIYGKPYSGPQEVADADGLSVRISPKG------VIQFQYRYRWHGKPNRLGLG 56 SD ++ + KP + + ++ G ++ + P G F Y Y +GK L LG Sbjct: 5 FSDKFIQNL--KPEAKKYYIRESRGFAIVVHPSGIKNPKGTKTFLYIYTINGKRKELKLG 62 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPR---TYFEEKVENSMTVAQCLDYWF----DNYV 109 YP ++LKDAR + +G DP E + ++T + + DN+ Sbjct: 63 NYPEVTLKDARIKHGEAYARLVNGEDPVTPPVIKAEPQDENLTFGHFTELYLQWSKDNHS 122 Query: 110 STTLR 114 Sbjct: 123 PKWHN 127 >UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP99_HAHCH Length = 416 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 11/117 (9%) Query: 2 AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVI---QFQYRYRWH--GKPNRLGLG 56 +SDTK+R ++D +GLS+RI PK + +RYR KP +L LG Sbjct: 3 KLSDTKIRNAK---TETDTCLSDGNGLSLRIYPKRGKIARTWVFRYRRPATKKPAKLSLG 59 Query: 57 RYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKV---ENSMTVAQCLDYWFDNYVS 110 YP +SL+ ARQ +R+ F G DP+ +E+ N++T Q + W S Sbjct: 60 DYPVISLRAARQQAEIMRQQLFEGLDPQYVQKEQRAENANAITTQQLFESWLTLQKS 116 >UniRef50_Q6LRH5 Putative uncharacterized protein n=3 Tax=Vibrionaceae RepID=Q6LRH5_PHOPR Length = 391 Score = 90.3 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 43/115 (37%), Positives = 72/115 (62%), Gaps = 2/115 (1%) Query: 1 MAISDTKLRTI-YGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYP 59 M++ D +LR I K Y GP ++ D DGL RI+P+ +I FQYR R++GK R+ +G+YP Sbjct: 1 MSLLDRRLRIISKLKTYDGPAQLNDGDGLIARITPRAIITFQYRCRFNGKQLRIHIGKYP 60 Query: 60 SLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDNYVSTTLR 114 + SLK+AR+ + +L SG +P+ + ++ +T+ C++YW +YV + Sbjct: 61 ATSLKEARRKHKIMMELRESGRNPKIANTGE-QDFVTLDDCVNYWLKHYVPNLKK 114 >UniRef50_Q0TL05 Phage integrase n=6 Tax=Escherichia coli RepID=Q0TL05_ECOL5 Length = 439 Score = 90.3 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 11/122 (9%) Query: 1 MAIS---DTKLRTIYGKPYSGPQEVAD----ADGLSVRISP-KGVIQFQYRYRWHGKPNR 52 M + D +L ++ A GL +R+ + YRYR KP + Sbjct: 1 MTFTITQDRQLASLTVTKEEKEILFAVKSKAGGGLFIRVRYGSDNKSWIYRYRIAQKPAK 60 Query: 53 LGLGRYPSLSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTV---AQCLDYWFDNYV 109 L LG YP++ L AR+ AD +L G DPR + + + + + ++ W + Sbjct: 61 LTLGSYPAMGLAQARKAHADAIELVRKGIDPRHIRKNEKQKNEQMIIYSELWKDWIEFRK 120 Query: 110 ST 111 ++ Sbjct: 121 TS 122 >UniRef50_Q72AY5 Integrase, truncation n=1 Tax=Desulfovibrio vulgaris str. Hildenborough RepID=Q72AY5_DESVH Length = 106 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Query: 1 MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS 60 MA++D ++ + +P++ +ADA GL + SP G +++RYR K N L G YP Sbjct: 1 MALTDIQVTAL--QPWTKAYRIADASGLCLEASPNGHKLWRFRYRLQAKANMLVRGVYPQ 58 Query: 61 LSLKDARQITADLRKLYFSGTD 82 +SLK AR + G + Sbjct: 59 VSLKQARLARDEAHLKLAQGVN 80 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.160 0.490 Lambda K H 0.267 0.0489 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 902,516,023 Number of Sequences: 3077464 Number of extensions: 43571447 Number of successful extensions: 118940 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1273 Number of HSP's successfully gapped in prelim test: 312 Number of HSP's that attempted gapping in prelim test: 116346 Number of HSP's gapped (non-prelim): 1615 length of query: 115 length of database: 1,040,396,356 effective HSP length: 82 effective length of query: 33 effective length of database: 788,044,308 effective search space: 26005462164 effective search space used: 26005462164 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 88 (38.3 bits)