BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (140 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B8F6Y2 L-fucose mutarotase n=150 Tax=Bacteria RepID=FUC... 180 1e-44 UniRef50_C8T2D3 Fucose operon FucU protein n=2 Tax=Enterobacteri... 174 1e-42 UniRef50_B7GNN9 RbsD or FucU transport n=7 Tax=Bacteria RepID=B7... 130 1e-29 UniRef50_Q8GBR6 Putative FucU homolog (Fragment) n=1 Tax=Trepone... 128 6e-29 UniRef50_A7VPL4 Putative uncharacterized protein n=1 Tax=Clostri... 126 2e-28 UniRef50_C7T7P0 Fucose operon protein n=2 Tax=Lactobacillus rham... 123 2e-27 UniRef50_A9KR29 RbsD or FucU transport n=13 Tax=cellular organis... 122 4e-27 UniRef50_C2KRR0 Ribose ABC superfamily ATP binding cassette tran... 121 7e-27 UniRef50_A2VDF0 Protein fucU homolog n=34 Tax=Metazoa RepID=CJ12... 120 1e-26 UniRef50_B5ZNU4 RbsD or FucU transport n=10 Tax=Alphaproteobacte... 118 6e-26 UniRef50_B1I9X5 Fucose operon FucU protein n=25 Tax=Bacteria Rep... 115 4e-25 UniRef50_C1BNJ8 FucU homolog n=2 Tax=Caligus rogercresseyi RepID... 114 6e-25 UniRef50_B7GNK7 RbsD or FucU transport n=26 Tax=Bacteria RepID=B... 112 3e-24 UniRef50_Q8R2K1-3 Isoform 3 of Protein fucU homolog n=1 Tax=Mus ... 102 5e-21 UniRef50_Q12BF4 RbsD or FucU transport n=6 Tax=Proteobacteria Re... 100 2e-20 UniRef50_B1Y3G2 RbsD or FucU transport n=8 Tax=Proteobacteria Re... 97 1e-19 UniRef50_A0NM05 Fucose dissimilation pathway protein n=1 Tax=Lab... 97 2e-19 UniRef50_A0B319 RbsD or FucU transport n=85 Tax=Proteobacteria R... 94 1e-18 UniRef50_C5C446 RbsD or FucU transport n=1 Tax=Beutenbergia cave... 87 1e-16 UniRef50_A8RJ38 Putative uncharacterized protein n=1 Tax=Clostri... 87 2e-16 UniRef50_B0NEL3 Putative uncharacterized protein n=1 Tax=Clostri... 87 2e-16 UniRef50_UPI0000F2AEE0 PREDICTED: similar to RIKEN cDNA 1810014F... 87 2e-16 UniRef50_Q89HT9 Bll5900 protein n=1 Tax=Bradyrhizobium japonicum... 78 9e-14 UniRef50_C5EN53 Putative uncharacterized protein n=1 Tax=Clostri... 76 3e-13 UniRef50_C4LFS0 RbsD or FucU transport n=1 Tax=Tolumonas auensis... 74 2e-12 UniRef50_B3T6P2 Putative RbsD / FucU transport protein family pr... 73 3e-12 UniRef50_B9K570 Putative uncharacterized protein n=1 Tax=Agrobac... 71 9e-12 UniRef50_C9Y9X7 Putative uncharacterized protein n=1 Tax=Curviba... 70 3e-11 UniRef50_Q2K1E4 Fucose dissimilation pathway protein n=5 Tax=Rhi... 67 1e-10 UniRef50_C6AR62 RbsD or FucU transport n=2 Tax=Rhizobium legumin... 65 9e-10 UniRef50_C6AZA9 RbsD or FucU transport n=18 Tax=Alphaproteobacte... 64 1e-09 UniRef50_UPI00019065E7 fucose dissimilation pathway protein n=1 ... 60 2e-08 UniRef50_A7BC25 Putative uncharacterized protein n=1 Tax=Actinom... 57 2e-07 UniRef50_A5UTT7 RbsD or FucU transport n=5 Tax=Bacteria RepID=A5... 55 6e-07 UniRef50_D2R7C7 RbsD or FucU transport n=4 Tax=Bacteria RepID=D2... 54 2e-06 UniRef50_C9YX65 Fuscose operon fucU protein n=2 Tax=Streptomyces... 52 4e-06 UniRef50_C7ILP1 RbsD or FucU transport n=3 Tax=Clostridiales Rep... 44 0.001 UniRef50_A8S316 Putative uncharacterized protein n=2 Tax=Clostri... 44 0.002 UniRef50_C3JZP4 D-ribose pyranase n=3 Tax=Proteobacteria RepID=R... 43 0.003 UniRef50_A5F1C1 D-ribose pyranase n=292 Tax=Bacteria RepID=RBSD_... 43 0.003 UniRef50_A8F3M5 D-ribose pyranase n=1 Tax=Thermotoga lettingae T... 42 0.005 UniRef50_C0CRI2 Putative uncharacterized protein n=1 Tax=Blautia... 42 0.007 UniRef50_A6WDZ4 RbsD or FucU transport n=1 Tax=Kineococcus radio... 41 0.010 UniRef50_A4IT64 D-ribose pyranase n=9 Tax=Firmicutes RepID=RBSD_... 41 0.011 UniRef50_Q54473 Regulation protein n=2 Tax=Enterobacteriaceae Re... 41 0.014 UniRef50_B1VU78 D-ribose pyranase 2 n=10 Tax=Actinobacteria (cla... 40 0.019 UniRef50_A7GLA2 D-ribose pyranase n=3 Tax=Bacteria RepID=RBSD_BACCN 39 0.053 >UniRef50_B8F6Y2 L-fucose mutarotase n=150 Tax=Bacteria RepID=FUCM_HAEPS Length = 146 Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 90/142 (63%), Positives = 109/142 (76%), Gaps = 2/142 (1%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK I P +SPELLKVLAEMGHGDEI+ SDAHFPAH + +VIRADG+ ++ LL+AI PL Sbjct: 1 MLKGIHPALSPELLKVLAEMGHGDEIVLSDAHFPAHQLHHKVIRADGIQIATLLEAITPL 60 Query: 61 FELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALS-LQAPCPDIIRINRFAFYERAQKAF 118 FE D Y PL MM AV GD+LD VE RY A++ + P + R+ RFAFY+RA+ A+ Sbjct: 61 FEYDQYVERPLAMMQAVHGDSLDLAVEERYLAAIAKINGKAPLVERVERFAFYDRAKIAY 120 Query: 119 AIVITGERAKYGNILLKKGVTP 140 A+VITGE AKYGNI+LKKGVTP Sbjct: 121 AVVITGELAKYGNIILKKGVTP 142 >UniRef50_C8T2D3 Fucose operon FucU protein n=2 Tax=Enterobacteriaceae RepID=C8T2D3_KLEPR Length = 129 Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 85/91 (93%), Positives = 87/91 (95%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGL VSDLLQAIIPL Sbjct: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLRVSDLLQAIIPL 60 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRN 91 FELDSYAPP+VMMAAVEGD LDP VE+RYR Sbjct: 61 FELDSYAPPVVMMAAVEGDALDPTVEQRYRR 91 >UniRef50_B7GNN9 RbsD or FucU transport n=7 Tax=Bacteria RepID=B7GNN9_BIFLI Length = 145 Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/143 (47%), Positives = 94/143 (65%), Gaps = 5/143 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMG--PQVIRADGLLVSDLLQAII 58 MLK I P+I P+LLK+L+EMGHGD I+ +DAHFPA S+G VIR DG + LL A++ Sbjct: 1 MLKGIPPIIQPDLLKILSEMGHGDAIVLADAHFPAESVGVRSHVIRYDGQPIEPLLDAVL 60 Query: 59 PLFELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALSLQAPCPD--IIRINRFAFYERAQ 115 L LD Y P+++M V GDT+D + RYR + P I + RFAFYE A Sbjct: 61 QLIPLDQYTEHPVLLMDKVPGDTVDTPIWDRYRQVIDRHEPGKQAGIGMLERFAFYEEAG 120 Query: 116 KAFAIVITGERAKYGNILLKKGV 138 +++ IV TGE+++Y NI+++KGV Sbjct: 121 RSYCIVATGEQSQYANIIIRKGV 143 >UniRef50_Q8GBR6 Putative FucU homolog (Fragment) n=1 Tax=Treponema maltophilum RepID=Q8GBR6_TREMA Length = 128 Score = 128 bits (321), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 65/121 (53%), Positives = 83/121 (68%), Gaps = 2/121 (1%) Query: 22 HGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSYA-PPLVMMAAVEGDT 80 HGDE++ SDA +P S +V+RADG+ + LL I+ L +D Y PLVMM A +GDT Sbjct: 1 HGDELVLSDAFYPGDSCNARVLRADGIKIPALLDGILRLINIDPYVNDPLVMMNAAKGDT 60 Query: 81 LDPEVERRYRNALSLQAP-CPDIIRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVT 139 LDP VE Y A+ P P I RI+RFAFYER++ AFAIV++GE KYGNI++KKGV Sbjct: 61 LDPAVEASYFKAIKNIYPDAPAIARIDRFAFYERSKSAFAIVVSGETVKYGNIIIKKGVV 120 Query: 140 P 140 P Sbjct: 121 P 121 >UniRef50_A7VPL4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPL4_9CLOT Length = 143 Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/141 (50%), Positives = 89/141 (63%), Gaps = 3/141 (2%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAH-SMGPQVIRADGLLVSDLLQAIIP 59 MLK ISPLISPELLK+LAEMGHGD I F DA+FPA S V+RADG+ + LL A++ Sbjct: 1 MLKKISPLISPELLKILAEMGHGDVIAFGDANFPAESSKASYVVRADGIPIPALLDAVLE 60 Query: 60 LFELDSY-APPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIR-INRFAFYERAQKA 117 LF +D++ P+ +M V GD PEV Y+ L+ D I + RF FY A Sbjct: 61 LFPIDTFVTQPVKLMQVVPGDDYVPEVVEEYKKILAKHDVDEDKIEYLERFDFYGHTDTA 120 Query: 118 FAIVITGERAKYGNILLKKGV 138 + +V TGE A+Y NI LKKGV Sbjct: 121 YCVVATGETARYANITLKKGV 141 >UniRef50_C7T7P0 Fucose operon protein n=2 Tax=Lactobacillus rhamnosus RepID=C7T7P0_LACRG Length = 145 Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/143 (47%), Positives = 91/143 (63%), Gaps = 5/143 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK I +SPEL+K L EMGHGDEI+ +DA++PA++ VIRADGL V DLLQ I+ L Sbjct: 1 MLKNIPKRLSPELVKTLMEMGHGDEILLADANYPANTNHDHVIRADGLTVLDLLQDILVL 60 Query: 61 FELDSYAP-PLVMMAAVEGDTL----DPEVERRYRNALSLQAPCPDIIRINRFAFYERAQ 115 LDSYA ++ V GD +P V +YR ++ + RF FYE ++ Sbjct: 61 MPLDSYADYQAIVQEVVPGDKHVPNGEPPVWHQYRTEIAKSFSDYQFKSLERFEFYEHSK 120 Query: 116 KAFAIVITGERAKYGNILLKKGV 138 + FAIV TG++A YGN++LKKGV Sbjct: 121 QCFAIVQTGDQALYGNLILKKGV 143 >UniRef50_A9KR29 RbsD or FucU transport n=13 Tax=cellular organisms RepID=A9KR29_CLOPH Length = 148 Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 5/144 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ--VIRADGLLVSDLLQAII 58 ML I ++SPELLKVL EMGH D I+ +D +FPA S+G VIR DG V LL AI+ Sbjct: 1 MLNKIPKILSPELLKVLCEMGHSDRIVIADGNFPAQSVGKDAIVIRCDGHDVPSLLSAIL 60 Query: 59 PLFELDSYA-PPLVMMAAVEGDTLDPEVERRYRNALSL--QAPCPDIIRINRFAFYERAQ 115 +F LD+Y P ++M V GDT++ + Y+ + + I I RFAFYE A+ Sbjct: 61 TVFPLDTYVDKPALLMEKVPGDTVETPIWEEYKKIVGQFDERGEKAIGSIERFAFYEEAK 120 Query: 116 KAFAIVITGERAKYGNILLKKGVT 139 KA+AI+ TGE+A Y NI+L+KGV Sbjct: 121 KAYAIIATGEKALYANIILQKGVV 144 >UniRef50_C2KRR0 Ribose ABC superfamily ATP binding cassette transporter, membrane protein n=2 Tax=Mobiluncus mulieris RepID=C2KRR0_9ACTO Length = 141 Score = 121 bits (303), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 65/139 (46%), Positives = 88/139 (63%), Gaps = 2/139 (1%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 ML I ++SPEL+KV+ EMGHGDEI F DA++P + +VIRADGLL+ D+L ++ L Sbjct: 1 MLYKIPHILSPELVKVMMEMGHGDEITFGDANYPQNGSTQKVIRADGLLIPDILAGVLEL 60 Query: 61 FELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFA 119 LD Y +M VEGD+ P+V Y + AP + RF FYE+A+K+ Sbjct: 61 LPLDFYNDWQYALMNTVEGDS-RPDVWDTYDKIVKNAAPQATLKLFERFDFYEQARKSQV 119 Query: 120 IVITGERAKYGNILLKKGV 138 V+TGE A YGNI+L+KGV Sbjct: 120 TVLTGETALYGNIILRKGV 138 >UniRef50_A2VDF0 Protein fucU homolog n=34 Tax=Metazoa RepID=CJ125_HUMAN Length = 154 Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/144 (47%), Positives = 89/144 (61%), Gaps = 7/144 (4%) Query: 2 LKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSM---GPQVIRADGLLVSDLLQAII 58 LK + L+SPELL LA MGHGDEI+ +D +FPA S+ GP IRADGL + LL+A++ Sbjct: 4 LKGVPALLSPELLYALARMGHGDEIVLADLNFPASSICQCGPMEIRADGLGIPQLLEAVL 63 Query: 59 PLFELDSYA-PPLVMMAAVEGDT---LDPEVERRYRNALSLQAPCPDIIRINRFAFYERA 114 L LD+Y P +M V D L V Y + L + +I RF FYERA Sbjct: 64 KLLPLDTYVESPAAVMELVPSDKERGLQTPVWTEYESILRRAGCVRALAKIERFEFYERA 123 Query: 115 QKAFAIVITGERAKYGNILLKKGV 138 +KAFA+V TGE A YGN++L+KGV Sbjct: 124 KKAFAVVATGETALYGNLILRKGV 147 >UniRef50_B5ZNU4 RbsD or FucU transport n=10 Tax=Alphaproteobacteria RepID=B5ZNU4_RHILW Length = 149 Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 65/140 (46%), Positives = 88/140 (62%), Gaps = 1/140 (0%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK I PL+ P+LL L MGHGD+I+ +DA+FP+ SMGP VIRADG+ +D+ +AI+ Sbjct: 1 MLKGIHPLLGPDLLHALKTMGHGDDIVIADANFPSGSMGPPVIRADGVSATDMAEAILAH 60 Query: 61 FELDSYAPPLVMMAAVEGD-TLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFA 119 LD++ P V GD PEV ++ +S +A I+ + RFAFY A+KA Sbjct: 61 MPLDTFVPETAWRMEVVGDPQAVPEVCAEFQKIVSRRAGDFAIVPVERFAFYAMARKAAY 120 Query: 120 IVITGERAKYGNILLKKGVT 139 IV T E YGN++LKKGV Sbjct: 121 IVATTEFRLYGNLILKKGVV 140 >UniRef50_B1I9X5 Fucose operon FucU protein n=25 Tax=Bacteria RepID=B1I9X5_STRPI Length = 146 Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 64/140 (45%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK I ISP+LLK L EMGHGDEI+ +DA++P+ S ++IR DG+ + +LL +I+ L Sbjct: 1 MLKHIPKNISPDLLKTLMEMGHGDEIVLADANYPSASCANKLIRCDGVNIPELLDSILYL 60 Query: 61 FELDSYAPPLV-MMAAVEGDTLDPEVERRYRNALSLQAP-CPDIIRINRFAFYERAQKAF 118 LDSY + M V GD + P++ YR + I + R FYER++KA+ Sbjct: 61 MPLDSYVDSSIQFMNVVSGDDI-PKIWGTYRQMIEGHGTDLKTITYLRREDFYERSKKAY 119 Query: 119 AIVITGERAKYGNILLKKGV 138 AIV TGE + Y NI+LKKGV Sbjct: 120 AIVATGETSLYANIILKKGV 139 >UniRef50_C1BNJ8 FucU homolog n=2 Tax=Caligus rogercresseyi RepID=C1BNJ8_9MAXI Length = 152 Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 65/146 (44%), Positives = 95/146 (65%), Gaps = 10/146 (6%) Query: 2 LKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSM---GPQVIRADGLLVSDLLQAII 58 L+ I +ISP+LL LA+MGHGDEI+ +D++FP+ S+ G +++ A G + DLLQAI+ Sbjct: 4 LRGIPSIISPDLLYTLAQMGHGDEIVLADSNFPSFSVSKCGAKLVDASGHSIPDLLQAIL 63 Query: 59 PLFELDSYA-PPLVMMAAVEGD---TLDPEVERRYRNALSLQAPCPDI--IRINRFAFYE 112 PLF LD Y P ++M V D L ++ Y L+ + DI + + RF FYE Sbjct: 64 PLFPLDHYVFNPAIVMELVNADKKKNLKIDIWSTYEKILA-DSEGRDIPMLEVERFEFYE 122 Query: 113 RAQKAFAIVITGERAKYGNILLKKGV 138 RA++++A+V TGE + YGNI+LKKGV Sbjct: 123 RAKRSYAVVSTGETSIYGNIILKKGV 148 >UniRef50_B7GNK7 RbsD or FucU transport n=26 Tax=Bacteria RepID=B7GNK7_BIFLI Length = 148 Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 90/144 (62%), Gaps = 5/144 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ--VIRADGLLVSDLLQAII 58 MLK I +I PELLKVL EMGHGD+++ +D +FPA S+G V+R DG ++L+AI+ Sbjct: 1 MLKGIPKIIPPELLKVLCEMGHGDQLVIADGNFPAESIGKNAIVVRMDGHGGGEILKAIL 60 Query: 59 PLFELDSYA-PPLVMMAAVEGDTLDPEVERRYRNALSL--QAPCPDIIRINRFAFYERAQ 115 +F LD+Y P +M V GDT+ + Y + + I + RFAFYE+A+ Sbjct: 61 TVFPLDTYVDKPATLMEKVPGDTVATPIWDVYAGLIKEHDERGADAIGSLERFAFYEQAK 120 Query: 116 KAFAIVITGERAKYGNILLKKGVT 139 A+ ++ +GE A+Y N++L+KGV Sbjct: 121 NAYCVIASGESAQYANLILQKGVV 144 >UniRef50_Q8R2K1-3 Isoform 3 of Protein fucU homolog n=1 Tax=Mus musculus RepID=Q8R2K1-3 Length = 169 Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 59/125 (47%), Positives = 80/125 (64%), Gaps = 9/125 (7%) Query: 22 HGDEIIFSDAHFPAHSM---GPQVIRADGLLVSDLLQAIIPLFELDSYA-PPLVMMAAVE 77 GDEI+ +DA+FP S+ GP IRADGL + LL+A++ L LD+Y P +M V Sbjct: 40 EGDEIVLADANFPTSSICQCGPVEIRADGLDIPQLLEAVLRLLPLDTYVESPAAVMDLVP 99 Query: 78 GDT---LDPEVERRYRNALSLQAPCPD-IIRINRFAFYERAQKAFAIVITGERAKYGNIL 133 D L + +RY + L L+A C ++++ RF FYERA+KAFA+V TGE A YGNI+ Sbjct: 100 SDKEKGLQTPIWKRYESLL-LEADCKKTLMKLERFEFYERAKKAFAVVATGEMALYGNII 158 Query: 134 LKKGV 138 LKKG Sbjct: 159 LKKGT 163 >UniRef50_Q12BF4 RbsD or FucU transport n=6 Tax=Proteobacteria RepID=Q12BF4_POLSJ Length = 148 Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 82/143 (57%), Gaps = 6/143 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPA----HSMGPQVIRADGLLVSDLLQA 56 MLK I PL++P+ L LA MGHGD++ DA+FPA G ++++ G +L A Sbjct: 1 MLKNIPPLLTPDALHALASMGHGDDVAIVDANFPAARVAQQSGARLVQLAGTSAPQVLNA 60 Query: 57 IIPLFELDSYAPPLVMMAAVEGD-TLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQ 115 ++ L LD + P V G+ T P + +AL+ P + + RF FYERAQ Sbjct: 61 VLQLLPLDDFVPDAAWTMQVVGNATAIPAPVAEFASALAQAGERP-AVSLERFDFYERAQ 119 Query: 116 KAFAIVITGERAKYGNILLKKGV 138 A+ I+ TGE+ KYGNI+L+KGV Sbjct: 120 SAYLILQTGEQRKYGNIVLRKGV 142 >UniRef50_B1Y3G2 RbsD or FucU transport n=8 Tax=Proteobacteria RepID=B1Y3G2_LEPCP Length = 156 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/150 (42%), Positives = 86/150 (57%), Gaps = 13/150 (8%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMG-------PQVIRADGLLVSDL 53 MLK I PL++P+LLKVLAEMGHGDEI+ +DA+F A S+ V+ G + Sbjct: 1 MLKGIDPLLTPDLLKVLAEMGHGDEIVIADANFTAASLAIGANGVRKPVLHVSGAGIGRT 60 Query: 54 LQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPC----PDIIR-INRF 108 ++A+I L LD+ V V DT R R+ +++ A P+ + I RF Sbjct: 61 VEAVIKLLPLDAAVEQPVAYMQVS-DTPAGYRSRLQRDVIAMLADGGHARPEQCQAIERF 119 Query: 109 AFYERAQKAFAIVITGERAKYGNILLKKGV 138 AFY+R AFAIV+TG+ YGN +LKKGV Sbjct: 120 AFYDRVSGAFAIVLTGDLQPYGNFILKKGV 149 >UniRef50_A0NM05 Fucose dissimilation pathway protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NM05_9RHOB Length = 124 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/121 (43%), Positives = 70/121 (57%), Gaps = 2/121 (1%) Query: 20 MGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSYAP-PLVMMAAVEG 78 MGHGDEI DA+FPA S GP +R DG+ +D L+AI+ + LD++ P P M V Sbjct: 1 MGHGDEIAIVDANFPAESSGPDCVRLDGISATDTLKAILSVMPLDTFVPAPARTMQVVGD 60 Query: 79 DTLDPEVERRYRNALSLQAPCP-DIIRINRFAFYERAQKAFAIVITGERAKYGNILLKKG 137 PE+ ++ + A P I + R AFYE A AFA+V TGE YGNI+L KG Sbjct: 61 PDAVPEIVAEFQTIIDGTADKPAQIETLERHAFYEAASSAFAVVQTGETRLYGNIILTKG 120 Query: 138 V 138 + Sbjct: 121 I 121 >UniRef50_A0B319 RbsD or FucU transport n=85 Tax=Proteobacteria RepID=A0B319_BURCH Length = 173 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 7/145 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPA-----HSMGPQVIRADGLLVSDLLQ 55 MLK + PL+ ++L L MGHGDEI DA+FPA H++ + +R DG + +++ Sbjct: 23 MLKNLDPLLHADILHTLRAMGHGDEIAICDANFPAESVAEHTVVGRALRVDGADSARVVR 82 Query: 56 AIIPLFELDSYAPPLVMMAAVEGDTLD-PEVERRYRNALS-LQAPCPDIIRINRFAFYER 113 A++ + LD++ V GD P V+R + + + + + RFAFYER Sbjct: 83 AVLSVLPLDTFVDTPAWRMEVVGDAAAVPPVQREVQAEIDRAEGRAVPLTGVERFAFYER 142 Query: 114 AQKAFAIVITGERAKYGNILLKKGV 138 AQ+A+A+++TGE YG + KKGV Sbjct: 143 AQQAYAVIVTGETRGYGCFIFKKGV 167 >UniRef50_C5C446 RbsD or FucU transport n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C446_BEUC1 Length = 136 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 8/138 (5%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 ML I PL++ LL L MGH D ++ +DAHFPA + +++ G +++A+ + Sbjct: 1 MLSGIHPLLTGSLLAALDAMGHSDAVVVADAHFPAARLAARLVELPGTTAPQVVEALCTV 60 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 LD V+M A E + ++ L A P+ I+RFAFY+ A +AF + Sbjct: 61 LPLDDGPDAAVLMDAPE--------RQPVQDELVTAAGAPESSGIDRFAFYDAAAQAFLV 112 Query: 121 VITGERAKYGNILLKKGV 138 V TGE YGN+LL+KG+ Sbjct: 113 VRTGETRAYGNLLLRKGL 130 >UniRef50_A8RJ38 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJ38_9CLOT Length = 147 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 8/146 (5%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQV----IRADGLLVSDLLQA 56 ML + ISPELLKVL EMGHGD ++ DA+FPA S+ + IR DG +D+L A Sbjct: 1 MLSGVPASISPELLKVLHEMGHGDTLVIGDANFPAASIAAEKNHINIRCDGHRATDMLDA 60 Query: 57 IIPLFELDSYA-PPLVMMAAVE-GDTLDPEVERRYRNALSL--QAPCPDIIRINRFAFYE 112 I+ L LD + P+ +M +E L V + + ++ + + ++RFAFY+ Sbjct: 61 ILQLMPLDGFVEKPVTIMDKMEMHRDLKCPVWDEFTDIVAKHDERGADAVGFLDRFAFYD 120 Query: 113 RAQKAFAIVITGERAKYGNILLKKGV 138 A+ A+A+V T E A Y I+++KG Sbjct: 121 AAKDAYAVVSTSETAFYACIMIQKGC 146 >UniRef50_B0NEL3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEL3_EUBSP Length = 153 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/145 (33%), Positives = 83/145 (57%), Gaps = 9/145 (6%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 ML+ I ++ P+L+K + EMGH D ++ +DA FP + ++IR D + +LL+AI+P Sbjct: 11 MLRNIPKILPPDLVKYMMEMGHADYLVIADAGFPGTAHSKRMIRMDSAEIPELLEAILPF 70 Query: 61 FELDSYAP-PLVMMAAVEGDTLDPEV--ERRYRNALS---LQAPCPDIIRINRFAFYERA 114 F LD + P+ +M ++ +PEV + Y L ++R FY+ A Sbjct: 71 FPLDYFVDYPVRLMQKLD---YEPEVMIWKTYEELLKKYDKDHAFKQFKYLDRLDFYKEA 127 Query: 115 QKAFAIVITGERAKYGNILLKKGVT 139 + A+ ++ TG+ ++YGNI+L+KGV Sbjct: 128 EDAYVVIQTGDTSRYGNIILQKGVC 152 >UniRef50_UPI0000F2AEE0 PREDICTED: similar to RIKEN cDNA 1810014F10 gene n=1 Tax=Monodelphis domestica RepID=UPI0000F2AEE0 Length = 172 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/102 (50%), Positives = 66/102 (64%), Gaps = 8/102 (7%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSM---GPQVIRADGLLVSDLLQAI 57 +LK I L+SPELL LA+MGHGDEI+ +DA+FP S+ GP IRADGL V LL++I Sbjct: 3 VLKGIPSLLSPELLFALAKMGHGDEIVLADANFPTSSICRCGPVEIRADGLSVPQLLESI 62 Query: 58 IPLFELDSYAPPLVM-MAAVEGDTLD----PEVERRYRNALS 94 + L LD+Y P VM M VE D PEV + +R+ LS Sbjct: 63 LKLLPLDTYEPNSVMVMDVVESDKAKGLQTPEVWQTFRSLLS 104 >UniRef50_Q89HT9 Bll5900 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HT9_BRAJA Length = 147 Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 15/149 (10%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGP-----QVIRADGLLVSDLLQ 55 MLK+I P+++P+LL +LA MGHGD+++F DA+ PA + ++I+ G+ + + Sbjct: 1 MLKSIDPILTPDLLWLLASMGHGDDLVFVDANHPATRIAKTTSSQRLIQLPGMRMETAAR 60 Query: 56 AIIPLFELDSYAP-PLVMMAAVEGDTLDPEVERRY-----RNALSLQAPCPDIIRINRFA 109 AI+ ++ LD + P P+ +M V+ P+V+R R A AP ++ R Sbjct: 61 AIMSVYPLDDFDPDPVRVMMPVDDPDRVPDVQRAVLAEIERAAGRTVAPG----KLARPD 116 Query: 110 FYERAQKAFAIVITGERAKYGNILLKKGV 138 FY A F +V G+ YG L++KGV Sbjct: 117 FYRAAAAGFGVVQVGDSRGYGCFLIRKGV 145 >UniRef50_C5EN53 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN53_9FIRM Length = 147 Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/146 (36%), Positives = 78/146 (53%), Gaps = 8/146 (5%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFP--AHSMGPQVIRADGLLVSDLLQAII 58 MLK I IS +LLK LA+MGHGD +I +D +P + G I+A G +D+++ I+ Sbjct: 1 MLKGIPTRISSDLLKALADMGHGDLLIIADDFYPPITKTPGGVSIQAKGNSAADMIEDIL 60 Query: 59 PLFELD----SYAPPLVMMAAVEGDTLD-PEVERRYRNALSLQAPCPDII-RINRFAFYE 112 L LD Y ++ G ++D P+V +A+ P I+ I R FYE Sbjct: 61 KLMPLDVDYCEYPVEYMIPDKDSGISMDRPKVWDDAIDAVVKNGYAPKIVGEIERSKFYE 120 Query: 113 RAQKAFAIVITGERAKYGNILLKKGV 138 +A +A+ V T ER YG +L+KGV Sbjct: 121 KAGRAYVTVCTSERQPYGCFILQKGV 146 >UniRef50_C4LFS0 RbsD or FucU transport n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFS0_TOLAT Length = 148 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 9/146 (6%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ-----VIRADGLLVSDLLQ 55 MLK I P + ELL +LA MGHGDE+ D +FPA S+ + ++ G+ + Sbjct: 1 MLKNIPPFMDAELLWILAAMGHGDELAVVDRNFPARSIANETTSGKLVSLGGMDAPTCIS 60 Query: 56 AIIPLFELDSYAP-PLVMMAAVE--GDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYE 112 I+ L LD++ P P+ M V+ G L + + A + I RF +Y Sbjct: 61 GILELMPLDNFVPTPVGWMDPVDQPGTILSVHHDVLAACKKAENAEVGHYV-IERFDYYA 119 Query: 113 RAQKAFAIVITGERAKYGNILLKKGV 138 A+K FA+V T E YG +LKKGV Sbjct: 120 AAKKCFAVVQTSENRPYGCFILKKGV 145 >UniRef50_B3T6P2 Putative RbsD / FucU transport protein family protein n=1 Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6P2_9ZZZZ Length = 135 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 30/138 (21%) Query: 20 MGHGDEIIFSDAHFPAHSMGPQV-----IRADGLLVSDLLQAIIPLFELDSYAPPLVMMA 74 MGHGDE++ +D +FP+ S+ + I+ DGL + +L +AI+ +F LDS+ V Sbjct: 1 MGHGDELVLTDCNFPSDSVAAETVTGKFIQMDGLDIPELAKAILSVFPLDSFVSEPVFRM 60 Query: 75 AVEG-------------DTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIV 121 V G + LD +RR+ +I I R AFYERA+ A+A+V Sbjct: 61 EVVGKPGELVGCHKDMRNILDETSDRRW-----------EIGSIERHAFYERAKNAYAVV 109 Query: 122 I-TGERAKYGNILLKKGV 138 GER YG + KGV Sbjct: 110 CAAGERRPYGCFIFIKGV 127 >UniRef50_B9K570 Putative uncharacterized protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K570_AGRVS Length = 146 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 13/148 (8%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPA-----HSMGPQVIRADGLLVSDLLQ 55 MLK I P+++ ELL L MGHGD+++ D + PA H+ ++I G + Sbjct: 1 MLKGIDPVLNAELLHALMLMGHGDQLVLCDINHPAETIAKHTTYGKLINLSGCGLEVATA 60 Query: 56 AIIPLFELDSYAPPLVMMAAVEGD-----TLDPEVERRYRNALSLQAPCPDIIRINRFAF 110 AI+ LF LD++ V V GD + ++R NA + I + RFAF Sbjct: 61 AILTLFPLDTFVEAPVKRMQVVGDPGGQVPIFSAIQRVVDNA---EGRPVKIDALERFAF 117 Query: 111 YERAQKAFAIVITGERAKYGNILLKKGV 138 Y A+ +FAIV T + YG + KGV Sbjct: 118 YAEAKASFAIVRTSDPGPYGCFIFSKGV 145 >UniRef50_C9Y9X7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9X7_9BURK Length = 145 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 13/147 (8%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSM--GPQVIRADGLLVSDLLQAII 58 MLK + PL++PELL L+ MGHG+ + DA+F A + G ++R G + + +A++ Sbjct: 1 MLKGLDPLLTPELLMHLSAMGHGEWVAVVDANFTADFLGKGKALVRLPGHSLERVSKAVL 60 Query: 59 PLFEL-DSYAPPLVMMAAV---EGDTLDPE---VERRYRNALSLQAPCPDIIRINRFAFY 111 +F L + A P M EG + V+ R+ L P + + RFAFY Sbjct: 61 SVFPLAEDVACPAAYMQVCNSPEGHRTAAQSSVVDLLGRDGL----PANRVEAVERFAFY 116 Query: 112 ERAQKAFAIVITGERAKYGNILLKKGV 138 E+ + A IV +GE YGN + KGV Sbjct: 117 EKIKGASVIVQSGEATAYGNAMFCKGV 143 >UniRef50_Q2K1E4 Fucose dissimilation pathway protein n=5 Tax=Rhizobium RepID=Q2K1E4_RHIEC Length = 153 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 13/150 (8%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDL-----LQ 55 MLK I ++ ++L+ L MGHGD ++ SD +FP+ S+ Q L + ++ + Sbjct: 1 MLKGIRAELNGDILQALCNMGHGDYLVISDMNFPSDSIARQTRLGRLLTMENIPAPQAID 60 Query: 56 AIIPLFELDSYAPPLVMMAAVEG--DTLDP---EVERRYRNALSLQAPCPDIIRINRFAF 110 A++ + LD+ P V V G D + P EV+ A +P + + R AF Sbjct: 61 AVLSVLPLDTPIQPSVGRMEVIGKPDEIPPIQQEVQAIVDRAEGKPSP---MYPVERMAF 117 Query: 111 YERAQKAFAIVITGERAKYGNILLKKGVTP 140 Y+ A+KA+ ++ TGE YG LL KGV P Sbjct: 118 YDIAKKAYCVIATGELRFYGCFLLTKGVIP 147 >UniRef50_C6AR62 RbsD or FucU transport n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=C6AR62_RHILS Length = 147 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/156 (34%), Positives = 74/156 (47%), Gaps = 31/156 (19%) Query: 2 LKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVS-------DLL 54 LK I ++ P+LL +L+ MGHGDE+ D +F A + + + G LVS D + Sbjct: 3 LKNIPGILCPDLLWILSAMGHGDELAIVDKNFSACRVSKKTVT--GKLVSMNAASATDAI 60 Query: 55 QAIIPLFELDSYAPPLVM----------MAAVEGDT--LDPEVERRYRNALSLQAPCPDI 102 AI+ + LD + +M M V D L VE R + S Sbjct: 61 AAILAVMPLDHFVEQPLMHMEDPDQAGTMLPVHADVELLCSTVEMRSIKSRS-------- 112 Query: 103 IRINRFAFYERAQKAFAIVITGERAKYGNILLKKGV 138 I RFA+Y A+ FA+V TGE YGN +LKKGV Sbjct: 113 --IERFAYYPLAESCFAVVHTGETRPYGNFILKKGV 146 >UniRef50_C6AZA9 RbsD or FucU transport n=18 Tax=Alphaproteobacteria RepID=C6AZA9_RHILS Length = 158 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 3/121 (2%) Query: 20 MGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSYAPPLVMMAAV--E 77 MGHGDEI D ++P ++IR DG + +L A++ + +D + + + V E Sbjct: 20 MGHGDEIAIVDGNYPGVEHARRLIRLDGHHLIPVLNAVLSVLPIDDFVAEAIFRSTVKAE 79 Query: 78 GDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGERAKYGNILLKKG 137 D LDP V + + P ++ + FY R + A A++ TGE Y NI+L+KG Sbjct: 80 RDKLDP-VHEEMIDCCARHEPHRQVVPLIGQDFYGRVKTAHALIQTGEPRLYANIILRKG 138 Query: 138 V 138 V Sbjct: 139 V 139 >UniRef50_UPI00019065E7 fucose dissimilation pathway protein n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019065E7 Length = 157 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 13/148 (8%) Query: 3 KTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ-----VIRADGLLVSDLLQAI 57 + P + K A GHGD ++ SD +FP+ S+ Q ++ + + + AI Sbjct: 7 REFGPNSTATFFKHFAIWGHGDYLVISDMNFPSDSIARQTRLGTLLTMENISAPQAIDAI 66 Query: 58 IPLFELDSYAPPLVMMAAVEG--DTLDP---EVERRYRNALSLQAPCPDIIRINRFAFYE 112 + + LD+ P V V G D + P EV+ A +P + + R AFYE Sbjct: 67 LSVLPLDTPIQPSVGRMEVIGKPDEIPPIQQEVQAIVDRAEGKPSP---MYPVERMAFYE 123 Query: 113 RAQKAFAIVITGERAKYGNILLKKGVTP 140 A+KA+ ++ TGE YG LL KGV P Sbjct: 124 IAKKAYCVIATGELRFYGCFLLTKGVIP 151 >UniRef50_A7BC25 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC25_9ACTO Length = 138 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 24/144 (16%) Query: 8 LISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ-------VIRADGLL----VSDLLQA 56 + P+ L+ LA GHG +I+ +DA++P H+ G + A GLL V D+L+ Sbjct: 1 MTHPQFLRALAAAGHGSKILLADANYP-HTTGVNPRCELISLNLAPGLLDVSQVLDVLKR 59 Query: 57 IIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYE--RA 114 IP+ + +M A + D ++ + +R AL P + I+R+ FY+ R Sbjct: 60 TIPIERAE------IMTPAPDADPVEIPIHDEFRAAL----PGVEFGEISRWDFYDAARD 109 Query: 115 QKAFAIVITGERAKYGNILLKKGV 138 + IV TGE+ YGN+LL GV Sbjct: 110 ENVGIIVATGEQRLYGNLLLTVGV 133 >UniRef50_A5UTT7 RbsD or FucU transport n=5 Tax=Bacteria RepID=A5UTT7_ROSS1 Length = 139 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 19/142 (13%) Query: 8 LISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIR------ADGLL-VSDLLQAIIPL 60 LI P++L L GHG +++ +D ++P + P + A GLL V+D+L A++ Sbjct: 6 LIHPQILAALGGAGHGSQVLIADGNYPFATGAPASAQRVYLNLAPGLLTVTDVLAALVDA 65 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYE--RAQKAF 118 +++ V +P + +R L P + + RFAFY+ R+ Sbjct: 66 IPVEA------AHVMVPDAGPEPSIFTEFRALL----PYLSLQPLGRFAFYDAARSPDTT 115 Query: 119 AIVITGERAKYGNILLKKGVTP 140 ++ TGER Y NILL GV P Sbjct: 116 LVIATGERRVYANILLTIGVVP 137 >UniRef50_D2R7C7 RbsD or FucU transport n=4 Tax=Bacteria RepID=D2R7C7_9PLAN Length = 148 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 15/145 (10%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHS-MGPQVIRAD-----GLLVSD-LLQAI- 57 S LI PE+ +VLA GH +I+ +D H+PA S GP GL+ D LQA+ Sbjct: 4 STLIHPEISRVLAAAGHHAKILIADGHYPASSKKGPNATVVSMNLMPGLITCDQALQAVL 63 Query: 58 --IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQ 115 +P+ E+++ P ++ DP V YR L+ ++ I+++ FY+ Sbjct: 64 SAVPIDEINTMNYPKDDPYTLDS---DPPVWNEYRQTLAKLGMNLELKPIDKWDFYDAVA 120 Query: 116 KAFAIVI--TGERAKYGNILLKKGV 138 A ++ T + ++ N+LL GV Sbjct: 121 TADHVLTIQTADTQRFANLLLSIGV 145 >UniRef50_C9YX65 Fuscose operon fucU protein n=2 Tax=Streptomyces RepID=C9YX65_STRSW Length = 145 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 26/147 (17%) Query: 5 ISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIR------ADGLL----VSDLL 54 ++ L+ P +L+ LA GHG ++ +D H+PA + + R A GLL V D+L Sbjct: 3 LTDLLHPGILEALAGAGHGSRVLLADGHYPASTATGERARIVHLNLAPGLLDVTTVLDVL 62 Query: 55 QAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERA 114 IP+ PP +G+ P + YR+ L AP P + + RF FY+ A Sbjct: 63 LRAIPIESAHVMVPP-------KGEPEPPAIA-EYRDRL---APVP-VETLGRFEFYDAA 110 Query: 115 QK---AFAIVITGERAKYGNILLKKGV 138 + A AIV T + Y N+LL GV Sbjct: 111 RYSDVALAIV-TADTRTYANLLLTIGV 136 >UniRef50_C7ILP1 RbsD or FucU transport n=3 Tax=Clostridiales RepID=C7ILP1_9CLOT Length = 137 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 14/144 (9%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLKT I+P+L+ +LA GHGD+++ +D ++P S L ++ + + Sbjct: 1 MLKT--ACINPDLIGLLAACGHGDKVLIADGNYPLESKTANNTAKMYLGLTHGIPLATQV 58 Query: 61 FELDSYAPPLVMMAAVEG-DTLDPEVERRYRNALSLQAPCPDIIRIN---RFAFYERAQK 116 E+ L A+EG + + PE Q PD I+++ R+ FY+ +K Sbjct: 59 LEV------LGKTIAIEGAEVMVPESGDEPEIFAEFQELLPDGIKLSKLERYDFYDVCKK 112 Query: 117 -AFAIVI-TGERAKYGNILLKKGV 138 I I TGE+ + NIL+ GV Sbjct: 113 DNIKIAISTGEQRVFANILITVGV 136 >UniRef50_A8S316 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8S316_9CLOT Length = 132 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 14/140 (10%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQV---IRADGLLVSDLLQAI 57 MLKT ++ P+L +VLAE+ H D II DA P +V R D+L+ I Sbjct: 1 MLKT--GILHPQLARVLAELRHKDTIIIGDAGLPIPKGVERVDLGWRPGDPAYLDVLEEI 58 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA 117 + ++ + A E T+ P+ ++ + L P + I ER++ A Sbjct: 59 LKYIVVEG------AVFADEALTVTPDFHKKALDLLPQGLP---VEYIPHTELKERSKDA 109 Query: 118 FAIVITGERAKYGNILLKKG 137 AIV+TGE Y N++L G Sbjct: 110 KAIVLTGEFTGYTNVILSAG 129 >UniRef50_C3JZP4 D-ribose pyranase n=3 Tax=Proteobacteria RepID=RBSD_PSEFS Length = 134 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 34/149 (22%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFP----------AHSMG-PQVIRADGLLVSDL- 53 +PL++ L +V+A +GHGD ++ DA P A + G P I A +++S++ Sbjct: 4 TPLLNIALSRVIASLGHGDILVIGDAGLPVPPGVELIDLALTQGIPDFISALRIVLSEMQ 63 Query: 54 LQAIIPLFELDSYAPPLVMMAAVEGDTLDPEV---ERRYRNALSLQAPCPDIIRINRFAF 110 +++ + E+ PP A E +TL E ERR ++ AF Sbjct: 64 VESHVLAEEILLKQPP----ALNELNTLSDEAALGERRL---------------VSHEAF 104 Query: 111 YERAQKAFAIVITGERAKYGNILLKKGVT 139 + ++KA A+V TGE Y NI L GVT Sbjct: 105 KQLSRKARAVVRTGECQPYCNIALVSGVT 133 >UniRef50_A5F1C1 D-ribose pyranase n=292 Tax=Bacteria RepID=RBSD_VIBC3 Length = 139 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 19/143 (13%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVS------DLLQAIIP 59 S L++ EL ++A +GH DEI DA P + +V R D L + ++ I+ Sbjct: 4 STLLNSELSYLVATLGHTDEITICDAGLP---IPDEVTRIDLALTHGVPSFLETVRVILS 60 Query: 60 LFELDSYAPPLVMMAAVEGDTLDPEV-ERRYRNALSLQAPCPD---IIRINRFAFYERAQ 115 +++S ++ A E + P + E YR + + C I I+ AF +R Sbjct: 61 ESQIES------VIVAQEFAQVSPVLHEALYRELKAEEQLCGKPIAIQYISHEAFKQRTL 114 Query: 116 KAFAIVITGERAKYGNILLKKGV 138 ++ A+V TGE Y N++ + GV Sbjct: 115 QSRAVVRTGECTPYANVIFQAGV 137 >UniRef50_A8F3M5 D-ribose pyranase n=1 Tax=Thermotoga lettingae TMO RepID=RBSD_THELT Length = 140 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 12/135 (8%) Query: 8 LISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVS---DLLQAIIPLFELD 64 +++ EL ++A MGHGD + D+ FP + V D L++ +++ IIPL E Sbjct: 6 ILNRELSYLIASMGHGDILSIVDSGFP---ISEDVFCVDLSLIAGKPKIVEIIIPLLEEL 62 Query: 65 SYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITG 124 L+ A E + P + ++ LS+ I I F +R +++ +V TG Sbjct: 63 EIEKVLI---AEEIKMISP---KYHQKLLSIFPKNVQIEYIPHEKFKDRVRESKGVVRTG 116 Query: 125 ERAKYGNILLKKGVT 139 E+ Y +++L GVT Sbjct: 117 EQTSYSSVILVGGVT 131 >UniRef50_C0CRI2 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRI2_9FIRM Length = 136 Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 14/144 (9%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFP--AHSMGPQVIRADGLLVSDLLQAII 58 MLK LI PEL+ LA GHG +I+ +D ++P S G ++ G V +++ + Sbjct: 1 MLK--GKLIHPELIHQLALCGHGSKILIADGNYPLEEKSSGVKIFLGLGPGVPSVIEVLA 58 Query: 59 PLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAF 118 + + VM V D +PE+ +R L + R+ FY + Sbjct: 59 AIHSVCEIEKAQVM---VPEDDREPEIFGEFRRELPDLELEELV----RYDFYAACMEEG 111 Query: 119 AI---VITGERAKYGNILLKKGVT 139 + V TGE+ + NILL G Sbjct: 112 VLKLAVSTGEQRTFANILLTVGCV 135 >UniRef50_A6WDZ4 RbsD or FucU transport n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WDZ4_KINRD Length = 144 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 18/140 (12%) Query: 8 LISPELLKVLAEMGHGDEIIFSDAHFPAHS-MGPQV------IRADGLLVSDLLQAIIPL 60 L+ P+LL LA GHGD ++ +D +FP + P V +R + V D+L+ ++ Sbjct: 6 LLHPQLLAGLAAAGHGDRVVLADGNFPLRAGTNPSVPVVHLNLRPGLVTVLDVLEPLLGA 65 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFY--ERAQKAF 118 +++ +MA+ +G + Y L +A + ++R+AFY RA Sbjct: 66 VPVEAA----TVMASPDGAPV--PAHDDYARLLGERAA---LSAVDRWAFYAQSRADDVA 116 Query: 119 AIVITGERAKYGNILLKKGV 138 +V T ++ N++L GV Sbjct: 117 LVVATADQRLCANLILTVGV 136 >UniRef50_A4IT64 D-ribose pyranase n=9 Tax=Firmicutes RepID=RBSD_GEOTN Length = 132 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 19/138 (13%) Query: 8 LISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFE-LDSY 66 +++ EL +LA +GH D I+ +D P + ++ A L++ P LD+ Sbjct: 6 ILNKELNTLLASLGHTDTIVIADCGLPIPNEEARIDLA-------LVKGFPPFLSVLDAV 58 Query: 67 APPLV---MMAAVEGDTLDPEVERRYRNALSLQAPCPDI-IRINRFA-FYERAQKAFAIV 121 LV ++ A E T +P+V S++A D+ I+ R F E ++A A++ Sbjct: 59 INELVVEEIVLAEEIKTQNPDVYE------SIKARMSDVPIQFVRHEEFKEMTKQAKAVI 112 Query: 122 ITGERAKYGNILLKKGVT 139 TGE Y NI+L+ GV Sbjct: 113 RTGEATPYANIILRSGVN 130 >UniRef50_Q54473 Regulation protein n=2 Tax=Enterobacteriaceae RepID=Q54473_SERMA Length = 138 Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 18/138 (13%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ------VIRADGLLVSD-LLQAII 58 S + P LL LA+ GH +++ +D ++ + P+ + A G L + +L+ ++ Sbjct: 4 SAITHPPLLAALAQCGHKTQVLIADGNYACVTHAPKDATVVYLNLAPGTLAAPPILEKLL 63 Query: 59 PLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYE--RAQK 116 ++S A + A D + +E YR L P I + R AFY ++ + Sbjct: 64 ACINVESAA-----LMACPPDFTN-TIEAEYRQLLPEHCP---IEYLPREAFYAAVKSDR 114 Query: 117 AFAIVITGERAKYGNILL 134 ++ +GER ++ N+LL Sbjct: 115 TLLVIASGERRRFANLLL 132 >UniRef50_B1VU78 D-ribose pyranase 2 n=10 Tax=Actinobacteria (class) RepID=RBSD2_STRGG Length = 129 Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 61/137 (44%), Gaps = 17/137 (12%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDL-LQAIIPLFE-- 62 S +++ L +AE+GHGD ++ DA P GP+VI DL +A P F Sbjct: 4 SGILNRHLAGAIAELGHGDTVLVCDAGMPIPP-GPRVI--------DLAFRAGTPSFAEV 54 Query: 63 LDSYAPPLVMMAAVEGDTLDPEVERRYRNALS-LQAPCPDIIRINRFAFYERAQKAFAIV 121 LD LV VEG T E+ +A + L P + + R A +V Sbjct: 55 LDGLLDELV----VEGATAAEEIRDANPDAAALLDVHFPWLEAVPHDELKARTAAARLVV 110 Query: 122 ITGERAKYGNILLKKGV 138 TGE Y N+LL+ GV Sbjct: 111 RTGEARPYANVLLRCGV 127 >UniRef50_A7GLA2 D-ribose pyranase n=3 Tax=Bacteria RepID=RBSD_BACCN Length = 131 Score = 38.9 bits (89), Expect = 0.053, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 21/138 (15%) Query: 8 LISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVS-------DLLQAIIPL 60 +++ E+ +LA +GH D I+ +D P P ++ L V D+LQ +I Sbjct: 6 VLNSEIAAILAALGHTDTIVIADCGLPI----PDSVKRIDLAVELGKPSFLDVLQVVIED 61 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 ++ + + E+E R + A + + F E+ ++A AI Sbjct: 62 MAIEKVT--VAEEITTNNREIYKEIETRLKEA--------NFEYVLHEEFKEKTKQAKAI 111 Query: 121 VITGERAKYGNILLKKGV 138 + TGE Y NI+L GV Sbjct: 112 IRTGEATPYANIILHAGV 129 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A9KR29 RbsD or FucU transport n=13 Tax=cellular organis... 196 2e-49 UniRef50_B1I9X5 Fucose operon FucU protein n=25 Tax=Bacteria Rep... 195 4e-49 UniRef50_C7T7P0 Fucose operon protein n=2 Tax=Lactobacillus rham... 194 7e-49 UniRef50_B7GNK7 RbsD or FucU transport n=26 Tax=Bacteria RepID=B... 191 5e-48 UniRef50_B8F6Y2 L-fucose mutarotase n=150 Tax=Bacteria RepID=FUC... 190 1e-47 UniRef50_B7GNN9 RbsD or FucU transport n=7 Tax=Bacteria RepID=B7... 189 2e-47 UniRef50_A2VDF0 Protein fucU homolog n=34 Tax=Metazoa RepID=CJ12... 189 2e-47 UniRef50_C2KRR0 Ribose ABC superfamily ATP binding cassette tran... 185 4e-46 UniRef50_B5ZNU4 RbsD or FucU transport n=10 Tax=Alphaproteobacte... 185 5e-46 UniRef50_C1BNJ8 FucU homolog n=2 Tax=Caligus rogercresseyi RepID... 181 6e-45 UniRef50_A7VPL4 Putative uncharacterized protein n=1 Tax=Clostri... 181 8e-45 UniRef50_A0B319 RbsD or FucU transport n=85 Tax=Proteobacteria R... 180 2e-44 UniRef50_Q12BF4 RbsD or FucU transport n=6 Tax=Proteobacteria Re... 176 1e-43 UniRef50_A8RJ38 Putative uncharacterized protein n=1 Tax=Clostri... 173 2e-42 UniRef50_C4LFS0 RbsD or FucU transport n=1 Tax=Tolumonas auensis... 166 3e-40 UniRef50_B0NEL3 Putative uncharacterized protein n=1 Tax=Clostri... 165 3e-40 UniRef50_Q2K1E4 Fucose dissimilation pathway protein n=5 Tax=Rhi... 165 5e-40 UniRef50_B1Y3G2 RbsD or FucU transport n=8 Tax=Proteobacteria Re... 159 2e-38 UniRef50_A0NM05 Fucose dissimilation pathway protein n=1 Tax=Lab... 157 8e-38 UniRef50_B9K570 Putative uncharacterized protein n=1 Tax=Agrobac... 156 2e-37 UniRef50_Q8R2K1-3 Isoform 3 of Protein fucU homolog n=1 Tax=Mus ... 155 6e-37 UniRef50_UPI00019065E7 fucose dissimilation pathway protein n=1 ... 152 3e-36 UniRef50_C5EN53 Putative uncharacterized protein n=1 Tax=Clostri... 151 5e-36 UniRef50_Q89HT9 Bll5900 protein n=1 Tax=Bradyrhizobium japonicum... 150 1e-35 UniRef50_C5C446 RbsD or FucU transport n=1 Tax=Beutenbergia cave... 149 3e-35 UniRef50_C9Y9X7 Putative uncharacterized protein n=1 Tax=Curviba... 148 6e-35 UniRef50_Q8GBR6 Putative FucU homolog (Fragment) n=1 Tax=Trepone... 148 6e-35 UniRef50_C6AR62 RbsD or FucU transport n=2 Tax=Rhizobium legumin... 144 1e-33 UniRef50_C6AZA9 RbsD or FucU transport n=18 Tax=Alphaproteobacte... 143 1e-33 UniRef50_C8T2D3 Fucose operon FucU protein n=2 Tax=Enterobacteri... 139 2e-32 UniRef50_B3T6P2 Putative RbsD / FucU transport protein family pr... 139 2e-32 UniRef50_UPI0000F2AEE0 PREDICTED: similar to RIKEN cDNA 1810014F... 132 4e-30 UniRef50_D2R7C7 RbsD or FucU transport n=4 Tax=Bacteria RepID=D2... 123 1e-27 UniRef50_A5UTT7 RbsD or FucU transport n=5 Tax=Bacteria RepID=A5... 113 1e-24 UniRef50_A7BC25 Putative uncharacterized protein n=1 Tax=Actinom... 113 2e-24 UniRef50_C7ILP1 RbsD or FucU transport n=3 Tax=Clostridiales Rep... 112 4e-24 UniRef50_A8S316 Putative uncharacterized protein n=2 Tax=Clostri... 106 3e-22 UniRef50_C9YX65 Fuscose operon fucU protein n=2 Tax=Streptomyces... 102 3e-21 Sequences not found previously or not previously below threshold: UniRef50_C0CRI2 Putative uncharacterized protein n=1 Tax=Blautia... 98 1e-19 UniRef50_Q15PP4 RbsD or FucU transport n=1 Tax=Pseudoalteromonas... 96 4e-19 UniRef50_A6WDZ4 RbsD or FucU transport n=1 Tax=Kineococcus radio... 91 7e-18 UniRef50_A4IT64 D-ribose pyranase n=9 Tax=Firmicutes RepID=RBSD_... 81 1e-14 UniRef50_Q54473 Regulation protein n=2 Tax=Enterobacteriaceae Re... 81 1e-14 UniRef50_A7GLA2 D-ribose pyranase n=3 Tax=Bacteria RepID=RBSD_BACCN 80 2e-14 UniRef50_A5F1C1 D-ribose pyranase n=292 Tax=Bacteria RepID=RBSD_... 76 4e-13 UniRef50_A0Q217 D-ribose pyranase n=80 Tax=Firmicutes RepID=RBSD... 76 5e-13 UniRef50_Q65E56 D-ribose pyranase n=11 Tax=Bacillales RepID=RBSD... 74 1e-12 UniRef50_A5INL8 D-ribose pyranase n=8 Tax=Thermotogaceae RepID=R... 72 6e-12 UniRef50_C5EWH0 High affinity ribose transport protein RbsD n=1 ... 70 2e-11 UniRef50_A8F3M5 D-ribose pyranase n=1 Tax=Thermotoga lettingae T... 70 3e-11 UniRef50_UPI0001903CC7 fucose dissimilation pathway protein n=2 ... 69 5e-11 UniRef50_B1VU78 D-ribose pyranase 2 n=10 Tax=Actinobacteria (cla... 68 7e-11 UniRef50_C3JZP4 D-ribose pyranase n=3 Tax=Proteobacteria RepID=R... 66 3e-10 UniRef50_B5YY06 D-ribose pyranase n=72 Tax=Bacteria RepID=RBSD_E... 64 1e-09 UniRef50_Q1R0M9 RbsD or FucU transport n=1 Tax=Chromohalobacter ... 64 1e-09 UniRef50_D2BEN5 RbsD n=5 Tax=Actinomycetales RepID=D2BEN5_STRRD 61 8e-09 UniRef50_A4J7I2 D-ribose pyranase n=5 Tax=Bacteria RepID=RBSD_DESRM 61 9e-09 UniRef50_Q4KEW9 D-ribose pyranase n=18 Tax=Bacteria RepID=RBSD_P... 61 1e-08 UniRef50_B4U1H5 High affinity ribose transport protein RbsD n=3 ... 61 2e-08 UniRef50_C8WRM8 RbsD or FucU transport n=2 Tax=Alicyclobacillus ... 60 2e-08 UniRef50_C5VEK7 High affinity ribose transport protein RbsD n=2 ... 60 2e-08 UniRef50_Q6ABP6 D-ribose pyranase n=7 Tax=Actinobacteridae RepID... 59 4e-08 UniRef50_B1JKB6 RbsD or FucU transport n=22 Tax=Yersinia RepID=B... 59 5e-08 UniRef50_B4UZK2 FAD-dependent pyridine nucleotide-disulphide oxi... 58 7e-08 UniRef50_C9KQ30 Ribose ABC transporter protein RbsD n=1 Tax=Mits... 58 1e-07 UniRef50_Q02XM8 D-ribose pyranase n=23 Tax=Firmicutes RepID=RBSD... 58 1e-07 UniRef50_Q1AUT6 D-ribose pyranase 2 n=5 Tax=Actinobacteria (clas... 56 3e-07 UniRef50_B1ZN30 RbsD or FucU transport n=2 Tax=Chlamydiae/Verruc... 55 8e-07 UniRef50_D1BIP0 ABC-type ribose transport system, auxiliary comp... 48 7e-05 UniRef50_A3DCF4 RbsD or FucU transport n=4 Tax=Clostridiales Rep... 44 0.001 UniRef50_C3RHV1 Predicted protein n=2 Tax=Bacteria RepID=C3RHV1_... 41 0.015 UniRef50_C9Z5Q7 Putative carbohydrate transport protein n=1 Tax=... 40 0.021 >UniRef50_A9KR29 RbsD or FucU transport n=13 Tax=cellular organisms RepID=A9KR29_CLOPH Length = 148 Score = 196 bits (498), Expect = 2e-49, Method: Composition-based stats. Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 5/144 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ--VIRADGLLVSDLLQAII 58 ML I ++SPELLKVL EMGH D I+ +D +FPA S+G VIR DG V LL AI+ Sbjct: 1 MLNKIPKILSPELLKVLCEMGHSDRIVIADGNFPAQSVGKDAIVIRCDGHDVPSLLSAIL 60 Query: 59 PLFELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALSL--QAPCPDIIRINRFAFYERAQ 115 +F LD+Y P ++M V GDT++ + Y+ + + I I RFAFYE A+ Sbjct: 61 TVFPLDTYVDKPALLMEKVPGDTVETPIWEEYKKIVGQFDERGEKAIGSIERFAFYEEAK 120 Query: 116 KAFAIVITGERAKYGNILLKKGVT 139 KA+AI+ TGE+A Y NI+L+KGV Sbjct: 121 KAYAIIATGEKALYANIILQKGVV 144 >UniRef50_B1I9X5 Fucose operon FucU protein n=25 Tax=Bacteria RepID=B1I9X5_STRPI Length = 146 Score = 195 bits (496), Expect = 4e-49, Method: Composition-based stats. Identities = 64/141 (45%), Positives = 88/141 (62%), Gaps = 3/141 (2%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK I ISP+LLK L EMGHGDEI+ +DA++P+ S ++IR DG+ + +LL +I+ L Sbjct: 1 MLKHIPKNISPDLLKTLMEMGHGDEIVLADANYPSASCANKLIRCDGVNIPELLDSILYL 60 Query: 61 FELDSYAPPLV-MMAAVEGDTLDPEVERRYRNALSLQA-PCPDIIRINRFAFYERAQKAF 118 LDSY + M V GD + P++ YR + I + R FYER++KA+ Sbjct: 61 MPLDSYVDSSIQFMNVVSGDDI-PKIWGTYRQMIEGHGTDLKTITYLRREDFYERSKKAY 119 Query: 119 AIVITGERAKYGNILLKKGVT 139 AIV TGE + Y NI+LKKGV Sbjct: 120 AIVATGETSLYANIILKKGVV 140 >UniRef50_C7T7P0 Fucose operon protein n=2 Tax=Lactobacillus rhamnosus RepID=C7T7P0_LACRG Length = 145 Score = 194 bits (494), Expect = 7e-49, Method: Composition-based stats. Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 5/144 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK I +SPEL+K L EMGHGDEI+ +DA++PA++ VIRADGL V DLLQ I+ L Sbjct: 1 MLKNIPKRLSPELVKTLMEMGHGDEILLADANYPANTNHDHVIRADGLTVLDLLQDILVL 60 Query: 61 FELDSYAP-PLVMMAAVEGDTL----DPEVERRYRNALSLQAPCPDIIRINRFAFYERAQ 115 LDSYA ++ V GD +P V +YR ++ + RF FYE ++ Sbjct: 61 MPLDSYADYQAIVQEVVPGDKHVPNGEPPVWHQYRTEIAKSFSDYQFKSLERFEFYEHSK 120 Query: 116 KAFAIVITGERAKYGNILLKKGVT 139 + FAIV TG++A YGN++LKKGV Sbjct: 121 QCFAIVQTGDQALYGNLILKKGVI 144 >UniRef50_B7GNK7 RbsD or FucU transport n=26 Tax=Bacteria RepID=B7GNK7_BIFLI Length = 148 Score = 191 bits (487), Expect = 5e-48, Method: Composition-based stats. Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ--VIRADGLLVSDLLQAII 58 MLK I +I PELLKVL EMGHGD+++ +D +FPA S+G V+R DG ++L+AI+ Sbjct: 1 MLKGIPKIIPPELLKVLCEMGHGDQLVIADGNFPAESIGKNAIVVRMDGHGGGEILKAIL 60 Query: 59 PLFELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALSLQ--APCPDIIRINRFAFYERAQ 115 +F LD+Y P +M V GDT+ + Y + I + RFAFYE+A+ Sbjct: 61 TVFPLDTYVDKPATLMEKVPGDTVATPIWDVYAGLIKEHDERGADAIGSLERFAFYEQAK 120 Query: 116 KAFAIVITGERAKYGNILLKKGVT 139 A+ ++ +GE A+Y N++L+KGV Sbjct: 121 NAYCVIASGESAQYANLILQKGVV 144 >UniRef50_B8F6Y2 L-fucose mutarotase n=150 Tax=Bacteria RepID=FUCM_HAEPS Length = 146 Score = 190 bits (483), Expect = 1e-47, Method: Composition-based stats. Identities = 90/142 (63%), Positives = 108/142 (76%), Gaps = 2/142 (1%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK I P +SPELLKVLAEMGHGDEI+ SDAHFPAH + +VIRADG+ ++ LL+AI PL Sbjct: 1 MLKGIHPALSPELLKVLAEMGHGDEIVLSDAHFPAHQLHHKVIRADGIQIATLLEAITPL 60 Query: 61 FELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALSL-QAPCPDIIRINRFAFYERAQKAF 118 FE D Y PL MM AV GD+LD VE RY A++ P + R+ RFAFY+RA+ A+ Sbjct: 61 FEYDQYVERPLAMMQAVHGDSLDLAVEERYLAAIAKINGKAPLVERVERFAFYDRAKIAY 120 Query: 119 AIVITGERAKYGNILLKKGVTP 140 A+VITGE AKYGNI+LKKGVTP Sbjct: 121 AVVITGELAKYGNIILKKGVTP 142 >UniRef50_B7GNN9 RbsD or FucU transport n=7 Tax=Bacteria RepID=B7GNN9_BIFLI Length = 145 Score = 189 bits (481), Expect = 2e-47, Method: Composition-based stats. Identities = 68/144 (47%), Positives = 95/144 (65%), Gaps = 5/144 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ--VIRADGLLVSDLLQAII 58 MLK I P+I P+LLK+L+EMGHGD I+ +DAHFPA S+G + VIR DG + LL A++ Sbjct: 1 MLKGIPPIIQPDLLKILSEMGHGDAIVLADAHFPAESVGVRSHVIRYDGQPIEPLLDAVL 60 Query: 59 PLFELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALSLQAPCPD--IIRINRFAFYERAQ 115 L LD Y P+++M V GDT+D + RYR + P I + RFAFYE A Sbjct: 61 QLIPLDQYTEHPVLLMDKVPGDTVDTPIWDRYRQVIDRHEPGKQAGIGMLERFAFYEEAG 120 Query: 116 KAFAIVITGERAKYGNILLKKGVT 139 +++ IV TGE+++Y NI+++KGV Sbjct: 121 RSYCIVATGEQSQYANIIIRKGVI 144 >UniRef50_A2VDF0 Protein fucU homolog n=34 Tax=Metazoa RepID=CJ125_HUMAN Length = 154 Score = 189 bits (481), Expect = 2e-47, Method: Composition-based stats. Identities = 69/145 (47%), Positives = 89/145 (61%), Gaps = 7/145 (4%) Query: 2 LKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSM---GPQVIRADGLLVSDLLQAII 58 LK + L+SPELL LA MGHGDEI+ +D +FPA S+ GP IRADGL + LL+A++ Sbjct: 4 LKGVPALLSPELLYALARMGHGDEIVLADLNFPASSICQCGPMEIRADGLGIPQLLEAVL 63 Query: 59 PLFELDSYAP-PLVMMAAVEGDT---LDPEVERRYRNALSLQAPCPDIIRINRFAFYERA 114 L LD+Y P +M V D L V Y + L + +I RF FYERA Sbjct: 64 KLLPLDTYVESPAAVMELVPSDKERGLQTPVWTEYESILRRAGCVRALAKIERFEFYERA 123 Query: 115 QKAFAIVITGERAKYGNILLKKGVT 139 +KAFA+V TGE A YGN++L+KGV Sbjct: 124 KKAFAVVATGETALYGNLILRKGVL 148 >UniRef50_C2KRR0 Ribose ABC superfamily ATP binding cassette transporter, membrane protein n=2 Tax=Mobiluncus mulieris RepID=C2KRR0_9ACTO Length = 141 Score = 185 bits (470), Expect = 4e-46, Method: Composition-based stats. Identities = 65/140 (46%), Positives = 88/140 (62%), Gaps = 2/140 (1%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 ML I ++SPEL+KV+ EMGHGDEI F DA++P + +VIRADGLL+ D+L ++ L Sbjct: 1 MLYKIPHILSPELVKVMMEMGHGDEITFGDANYPQNGSTQKVIRADGLLIPDILAGVLEL 60 Query: 61 FELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFA 119 LD Y +M VEGD+ P+V Y + AP + RF FYE+A+K+ Sbjct: 61 LPLDFYNDWQYALMNTVEGDS-RPDVWDTYDKIVKNAAPQATLKLFERFDFYEQARKSQV 119 Query: 120 IVITGERAKYGNILLKKGVT 139 V+TGE A YGNI+L+KGV Sbjct: 120 TVLTGETALYGNIILRKGVV 139 >UniRef50_B5ZNU4 RbsD or FucU transport n=10 Tax=Alphaproteobacteria RepID=B5ZNU4_RHILW Length = 149 Score = 185 bits (469), Expect = 5e-46, Method: Composition-based stats. Identities = 65/140 (46%), Positives = 88/140 (62%), Gaps = 1/140 (0%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK I PL+ P+LL L MGHGD+I+ +DA+FP+ SMGP VIRADG+ +D+ +AI+ Sbjct: 1 MLKGIHPLLGPDLLHALKTMGHGDDIVIADANFPSGSMGPPVIRADGVSATDMAEAILAH 60 Query: 61 FELDSYAPPLVMMAAVEGDT-LDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFA 119 LD++ P V GD PEV ++ +S +A I+ + RFAFY A+KA Sbjct: 61 MPLDTFVPETAWRMEVVGDPQAVPEVCAEFQKIVSRRAGDFAIVPVERFAFYAMARKAAY 120 Query: 120 IVITGERAKYGNILLKKGVT 139 IV T E YGN++LKKGV Sbjct: 121 IVATTEFRLYGNLILKKGVV 140 >UniRef50_C1BNJ8 FucU homolog n=2 Tax=Caligus rogercresseyi RepID=C1BNJ8_9MAXI Length = 152 Score = 181 bits (460), Expect = 6e-45, Method: Composition-based stats. Identities = 63/146 (43%), Positives = 93/146 (63%), Gaps = 8/146 (5%) Query: 2 LKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHS---MGPQVIRADGLLVSDLLQAII 58 L+ I +ISP+LL LA+MGHGDEI+ +D++FP+ S G +++ A G + DLLQAI+ Sbjct: 4 LRGIPSIISPDLLYTLAQMGHGDEIVLADSNFPSFSVSKCGAKLVDASGHSIPDLLQAIL 63 Query: 59 PLFELDSYA-PPLVMMAAVEGDT---LDPEVERRYRNALS-LQAPCPDIIRINRFAFYER 113 PLF LD Y P ++M V D L ++ Y L+ + ++ + RF FYER Sbjct: 64 PLFPLDHYVFNPAIVMELVNADKKKNLKIDIWSTYEKILADSEGRDIPMLEVERFEFYER 123 Query: 114 AQKAFAIVITGERAKYGNILLKKGVT 139 A++++A+V TGE + YGNI+LKKGV Sbjct: 124 AKRSYAVVSTGETSIYGNIILKKGVI 149 >UniRef50_A7VPL4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPL4_9CLOT Length = 143 Score = 181 bits (459), Expect = 8e-45, Method: Composition-based stats. Identities = 70/142 (49%), Positives = 88/142 (61%), Gaps = 3/142 (2%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAH-SMGPQVIRADGLLVSDLLQAIIP 59 MLK ISPLISPELLK+LAEMGHGD I F DA+FPA S V+RADG+ + LL A++ Sbjct: 1 MLKKISPLISPELLKILAEMGHGDVIAFGDANFPAESSKASYVVRADGIPIPALLDAVLE 60 Query: 60 LFELDSYA-PPLVMMAAVEGDTLDPEVERRYRNALSLQA-PCPDIIRINRFAFYERAQKA 117 LF +D++ P+ +M V GD PEV Y+ L+ I + RF FY A Sbjct: 61 LFPIDTFVTQPVKLMQVVPGDDYVPEVVEEYKKILAKHDVDEDKIEYLERFDFYGHTDTA 120 Query: 118 FAIVITGERAKYGNILLKKGVT 139 + +V TGE A+Y NI LKKGV Sbjct: 121 YCVVATGETARYANITLKKGVI 142 >UniRef50_A0B319 RbsD or FucU transport n=85 Tax=Proteobacteria RepID=A0B319_BURCH Length = 173 Score = 180 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 7/146 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMG-----PQVIRADGLLVSDLLQ 55 MLK + PL+ ++L L MGHGDEI DA+FPA S+ + +R DG + +++ Sbjct: 23 MLKNLDPLLHADILHTLRAMGHGDEIAICDANFPAESVAEHTVVGRALRVDGADSARVVR 82 Query: 56 AIIPLFELDSYAPPLVMMAAVEGD-TLDPEVERRYRNALSL-QAPCPDIIRINRFAFYER 113 A++ + LD++ V GD P V+R + + + + + RFAFYER Sbjct: 83 AVLSVLPLDTFVDTPAWRMEVVGDAAAVPPVQREVQAEIDRAEGRAVPLTGVERFAFYER 142 Query: 114 AQKAFAIVITGERAKYGNILLKKGVT 139 AQ+A+A+++TGE YG + KKGV Sbjct: 143 AQQAYAVIVTGETRGYGCFIFKKGVL 168 >UniRef50_Q12BF4 RbsD or FucU transport n=6 Tax=Proteobacteria RepID=Q12BF4_POLSJ Length = 148 Score = 176 bits (448), Expect = 1e-43, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 83/144 (57%), Gaps = 6/144 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSM----GPQVIRADGLLVSDLLQA 56 MLK I PL++P+ L LA MGHGD++ DA+FPA + G ++++ G +L A Sbjct: 1 MLKNIPPLLTPDALHALASMGHGDDVAIVDANFPAARVAQQSGARLVQLAGTSAPQVLNA 60 Query: 57 IIPLFELDSYAPPLVMMAAVEGD-TLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQ 115 ++ L LD + P V G+ T P + +AL+ P + + RF FYERAQ Sbjct: 61 VLQLLPLDDFVPDAAWTMQVVGNATAIPAPVAEFASALAQAGERPAV-SLERFDFYERAQ 119 Query: 116 KAFAIVITGERAKYGNILLKKGVT 139 A+ I+ TGE+ KYGNI+L+KGV Sbjct: 120 SAYLILQTGEQRKYGNIVLRKGVI 143 >UniRef50_A8RJ38 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJ38_9CLOT Length = 147 Score = 173 bits (438), Expect = 2e-42, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 8/147 (5%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ----VIRADGLLVSDLLQA 56 ML + ISPELLKVL EMGHGD ++ DA+FPA S+ + IR DG +D+L A Sbjct: 1 MLSGVPASISPELLKVLHEMGHGDTLVIGDANFPAASIAAEKNHINIRCDGHRATDMLDA 60 Query: 57 IIPLFELDSYAP-PLVMMAAVE-GDTLDPEVERRYRNALSLQ--APCPDIIRINRFAFYE 112 I+ L LD + P+ +M +E L V + + ++ + ++RFAFY+ Sbjct: 61 ILQLMPLDGFVEKPVTIMDKMEMHRDLKCPVWDEFTDIVAKHDERGADAVGFLDRFAFYD 120 Query: 113 RAQKAFAIVITGERAKYGNILLKKGVT 139 A+ A+A+V T E A Y I+++KG Sbjct: 121 AAKDAYAVVSTSETAFYACIMIQKGCL 147 >UniRef50_C4LFS0 RbsD or FucU transport n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFS0_TOLAT Length = 148 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 50/146 (34%), Positives = 69/146 (47%), Gaps = 7/146 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMG-----PQVIRADGLLVSDLLQ 55 MLK I P + ELL +LA MGHGDE+ D +FPA S+ +++ G+ + Sbjct: 1 MLKNIPPFMDAELLWILAAMGHGDELAVVDRNFPARSIANETTSGKLVSLGGMDAPTCIS 60 Query: 56 AIIPLFELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIR-INRFAFYER 113 I+ L LD++ P P+ M V+ V A I RF +Y Sbjct: 61 GILELMPLDNFVPTPVGWMDPVDQPGTILSVHHDVLAACKKAENAEVGHYVIERFDYYAA 120 Query: 114 AQKAFAIVITGERAKYGNILLKKGVT 139 A+K FA+V T E YG +LKKGV Sbjct: 121 AKKCFAVVQTSENRPYGCFILKKGVV 146 >UniRef50_B0NEL3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEL3_EUBSP Length = 153 Score = 165 bits (419), Expect = 3e-40, Method: Composition-based stats. Identities = 45/143 (31%), Positives = 82/143 (57%), Gaps = 5/143 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 ML+ I ++ P+L+K + EMGH D ++ +DA FP + ++IR D + +LL+AI+P Sbjct: 11 MLRNIPKILPPDLVKYMMEMGHADYLVIADAGFPGTAHSKRMIRMDSAEIPELLEAILPF 70 Query: 61 FELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALS---LQAPCPDIIRINRFAFYERAQK 116 F LD + P+ +M ++ + + + + Y L ++R FY+ A+ Sbjct: 71 FPLDYFVDYPVRLMQKLDYEP-EVMIWKTYEELLKKYDKDHAFKQFKYLDRLDFYKEAED 129 Query: 117 AFAIVITGERAKYGNILLKKGVT 139 A+ ++ TG+ ++YGNI+L+KGV Sbjct: 130 AYVVIQTGDTSRYGNIILQKGVC 152 >UniRef50_Q2K1E4 Fucose dissimilation pathway protein n=5 Tax=Rhizobium RepID=Q2K1E4_RHIEC Length = 153 Score = 165 bits (417), Expect = 5e-40, Method: Composition-based stats. Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 7/147 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMG-----PQVIRADGLLVSDLLQ 55 MLK I ++ ++L+ L MGHGD ++ SD +FP+ S+ +++ + + + Sbjct: 1 MLKGIRAELNGDILQALCNMGHGDYLVISDMNFPSDSIARQTRLGRLLTMENIPAPQAID 60 Query: 56 AIIPLFELDSYAPPLVMMAAVEG-DTLDPEVERRYRNALSLQAPCPD-IIRINRFAFYER 113 A++ + LD+ P V V G P +++ + + P + + R AFY+ Sbjct: 61 AVLSVLPLDTPIQPSVGRMEVIGKPDEIPPIQQEVQAIVDRAEGKPSPMYPVERMAFYDI 120 Query: 114 AQKAFAIVITGERAKYGNILLKKGVTP 140 A+KA+ ++ TGE YG LL KGV P Sbjct: 121 AKKAYCVIATGELRFYGCFLLTKGVIP 147 >UniRef50_B1Y3G2 RbsD or FucU transport n=8 Tax=Proteobacteria RepID=B1Y3G2_LEPCP Length = 156 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 62/151 (41%), Positives = 83/151 (54%), Gaps = 13/151 (8%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMG-------PQVIRADGLLVSDL 53 MLK I PL++P+LLKVLAEMGHGDEI+ +DA+F A S+ V+ G + Sbjct: 1 MLKGIDPLLTPDLLKVLAEMGHGDEIVIADANFTAASLAIGANGVRKPVLHVSGAGIGRT 60 Query: 54 LQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIR-----INRF 108 ++A+I L LD+ V V DT R R+ +++ A I RF Sbjct: 61 VEAVIKLLPLDAAVEQPVAYMQV-SDTPAGYRSRLQRDVIAMLADGGHARPEQCQAIERF 119 Query: 109 AFYERAQKAFAIVITGERAKYGNILLKKGVT 139 AFY+R AFAIV+TG+ YGN +LKKGV Sbjct: 120 AFYDRVSGAFAIVLTGDLQPYGNFILKKGVI 150 >UniRef50_A0NM05 Fucose dissimilation pathway protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NM05_9RHOB Length = 124 Score = 157 bits (398), Expect = 8e-38, Method: Composition-based stats. Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 2/122 (1%) Query: 20 MGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGD 79 MGHGDEI DA+FPA S GP +R DG+ +D L+AI+ + LD++ P V GD Sbjct: 1 MGHGDEIAIVDANFPAESSGPDCVRLDGISATDTLKAILSVMPLDTFVPAPARTMQVVGD 60 Query: 80 T-LDPEVERRYRNALSLQAPCP-DIIRINRFAFYERAQKAFAIVITGERAKYGNILLKKG 137 PE+ ++ + A P I + R AFYE A AFA+V TGE YGNI+L KG Sbjct: 61 PDAVPEIVAEFQTIIDGTADKPAQIETLERHAFYEAASSAFAVVQTGETRLYGNIILTKG 120 Query: 138 VT 139 + Sbjct: 121 II 122 >UniRef50_B9K570 Putative uncharacterized protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K570_AGRVS Length = 146 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 7/146 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGP-----QVIRADGLLVSDLLQ 55 MLK I P+++ ELL L MGHGD+++ D + PA ++ ++I G + Sbjct: 1 MLKGIDPVLNAELLHALMLMGHGDQLVLCDINHPAETIAKHTTYGKLINLSGCGLEVATA 60 Query: 56 AIIPLFELDSYAPPLVMMAAVEGDT--LDPEVERRYRNALSLQAPCPDIIRINRFAFYER 113 AI+ LF LD++ V V GD P R + + I + RFAFY Sbjct: 61 AILTLFPLDTFVEAPVKRMQVVGDPGGQVPIFSAIQRVVDNAEGRPVKIDALERFAFYAE 120 Query: 114 AQKAFAIVITGERAKYGNILLKKGVT 139 A+ +FAIV T + YG + KGV Sbjct: 121 AKASFAIVRTSDPGPYGCFIFSKGVV 146 >UniRef50_Q8R2K1-3 Isoform 3 of Protein fucU homolog n=1 Tax=Mus musculus RepID=Q8R2K1-3 Length = 169 Score = 155 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 7/122 (5%) Query: 23 GDEIIFSDAHFPAHSM---GPQVIRADGLLVSDLLQAIIPLFELDSYAP-PLVMMAAVEG 78 GDEI+ +DA+FP S+ GP IRADGL + LL+A++ L LD+Y P +M V Sbjct: 41 GDEIVLADANFPTSSICQCGPVEIRADGLDIPQLLEAVLRLLPLDTYVESPAAVMDLVPS 100 Query: 79 DT---LDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGERAKYGNILLK 135 D L + +RY + L ++++ RF FYERA+KAFA+V TGE A YGNI+LK Sbjct: 101 DKEKGLQTPIWKRYESLLLEADCKKTLMKLERFEFYERAKKAFAVVATGEMALYGNIILK 160 Query: 136 KG 137 KG Sbjct: 161 KG 162 >UniRef50_UPI00019065E7 fucose dissimilation pathway protein n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019065E7 Length = 157 Score = 152 bits (384), Expect = 3e-36, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 7/145 (4%) Query: 3 KTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ-----VIRADGLLVSDLLQAI 57 + P + K A GHGD ++ SD +FP+ S+ Q ++ + + + AI Sbjct: 7 REFGPNSTATFFKHFAIWGHGDYLVISDMNFPSDSIARQTRLGTLLTMENISAPQAIDAI 66 Query: 58 IPLFELDSYAPPLVMMAAVEG-DTLDPEVERRYRNALSLQAPCPD-IIRINRFAFYERAQ 115 + + LD+ P V V G P +++ + + P + + R AFYE A+ Sbjct: 67 LSVLPLDTPIQPSVGRMEVIGKPDEIPPIQQEVQAIVDRAEGKPSPMYPVERMAFYEIAK 126 Query: 116 KAFAIVITGERAKYGNILLKKGVTP 140 KA+ ++ TGE YG LL KGV P Sbjct: 127 KAYCVIATGELRFYGCFLLTKGVIP 151 >UniRef50_C5EN53 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN53_9FIRM Length = 147 Score = 151 bits (383), Expect = 5e-36, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 77/147 (52%), Gaps = 8/147 (5%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFP--AHSMGPQVIRADGLLVSDLLQAII 58 MLK I IS +LLK LA+MGHGD +I +D +P + G I+A G +D+++ I+ Sbjct: 1 MLKGIPTRISSDLLKALADMGHGDLLIIADDFYPPITKTPGGVSIQAKGNSAADMIEDIL 60 Query: 59 PLFELD----SYAPPLVMMAAVEGDTLD-PEVERRYRNALSLQAPCPDI-IRINRFAFYE 112 L LD Y ++ G ++D P+V +A+ P I I R FYE Sbjct: 61 KLMPLDVDYCEYPVEYMIPDKDSGISMDRPKVWDDAIDAVVKNGYAPKIVGEIERSKFYE 120 Query: 113 RAQKAFAIVITGERAKYGNILLKKGVT 139 +A +A+ V T ER YG +L+KGV Sbjct: 121 KAGRAYVTVCTSERQPYGCFILQKGVM 147 >UniRef50_Q89HT9 Bll5900 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HT9_BRAJA Length = 147 Score = 150 bits (379), Expect = 1e-35, Method: Composition-based stats. Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 7/146 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGP-----QVIRADGLLVSDLLQ 55 MLK+I P+++P+LL +LA MGHGD+++F DA+ PA + ++I+ G+ + + Sbjct: 1 MLKSIDPILTPDLLWLLASMGHGDDLVFVDANHPATRIAKTTSSQRLIQLPGMRMETAAR 60 Query: 56 AIIPLFELDSY-APPLVMMAAVEGDTLDPEVERRYRNALSLQAPC-PDIIRINRFAFYER 113 AI+ ++ LD + P+ +M V+ P+V+R + A ++ R FY Sbjct: 61 AIMSVYPLDDFDPDPVRVMMPVDDPDRVPDVQRAVLAEIERAAGRTVAPGKLARPDFYRA 120 Query: 114 AQKAFAIVITGERAKYGNILLKKGVT 139 A F +V G+ YG L++KGV Sbjct: 121 AAAGFGVVQVGDSRGYGCFLIRKGVI 146 >UniRef50_C5C446 RbsD or FucU transport n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C446_BEUC1 Length = 136 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 49/137 (35%), Positives = 74/137 (54%), Gaps = 8/137 (5%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 ML I PL++ LL L MGH D ++ +DAHFPA + +++ G +++A+ + Sbjct: 1 MLSGIHPLLTGSLLAALDAMGHSDAVVVADAHFPAARLAARLVELPGTTAPQVVEALCTV 60 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 LD V+M A E + ++ L A P+ I+RFAFY+ A +AF + Sbjct: 61 LPLDDGPDAAVLMDAPE--------RQPVQDELVTAAGAPESSGIDRFAFYDAAAQAFLV 112 Query: 121 VITGERAKYGNILLKKG 137 V TGE YGN+LL+KG Sbjct: 113 VRTGETRAYGNLLLRKG 129 >UniRef50_C9Y9X7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9X7_9BURK Length = 145 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 5/144 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSM--GPQVIRADGLLVSDLLQAII 58 MLK + PL++PELL L+ MGHG+ + DA+F A + G ++R G + + +A++ Sbjct: 1 MLKGLDPLLTPELLMHLSAMGHGEWVAVVDANFTADFLGKGKALVRLPGHSLERVSKAVL 60 Query: 59 PLFEL-DSYAPPLVMMAAVEG-DTLDPEVERRYRNALSLQA-PCPDIIRINRFAFYERAQ 115 +F L + A P M + + + L P + + RFAFYE+ + Sbjct: 61 SVFPLAEDVACPAAYMQVCNSPEGHRTAAQSSVVDLLGRDGLPANRVEAVERFAFYEKIK 120 Query: 116 KAFAIVITGERAKYGNILLKKGVT 139 A IV +GE YGN + KGV Sbjct: 121 GASVIVQSGEATAYGNAMFCKGVI 144 >UniRef50_Q8GBR6 Putative FucU homolog (Fragment) n=1 Tax=Treponema maltophilum RepID=Q8GBR6_TREMA Length = 128 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 83/121 (68%), Gaps = 2/121 (1%) Query: 22 HGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSYA-PPLVMMAAVEGDT 80 HGDE++ SDA +P S +V+RADG+ + LL I+ L +D Y PLVMM A +GDT Sbjct: 1 HGDELVLSDAFYPGDSCNARVLRADGIKIPALLDGILRLINIDPYVNDPLVMMNAAKGDT 60 Query: 81 LDPEVERRYRNALSLQAP-CPDIIRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVT 139 LDP VE Y A+ P P I RI+RFAFYER++ AFAIV++GE KYGNI++KKGV Sbjct: 61 LDPAVEASYFKAIKNIYPDAPAIARIDRFAFYERSKSAFAIVVSGETVKYGNIIIKKGVV 120 Query: 140 P 140 P Sbjct: 121 P 121 >UniRef50_C6AR62 RbsD or FucU transport n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=C6AR62_RHILS Length = 147 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 7/145 (4%) Query: 2 LKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAH-----SMGPQVIRADGLLVSDLLQA 56 LK I ++ P+LL +L+ MGHGDE+ D +F A ++ +++ + +D + A Sbjct: 3 LKNIPGILCPDLLWILSAMGHGDELAIVDKNFSACRVSKKTVTGKLVSMNAASATDAIAA 62 Query: 57 IIPLFELDSYAPPLVMMAAVEGDT-LDPEVERRYRNALSLQAP-CPDIIRINRFAFYERA 114 I+ + LD + +M V S I RFA+Y A Sbjct: 63 ILAVMPLDHFVEQPLMHMEDPDQAGTMLPVHADVELLCSTVEMRSIKSRSIERFAYYPLA 122 Query: 115 QKAFAIVITGERAKYGNILLKKGVT 139 + FA+V TGE YGN +LKKGV Sbjct: 123 ESCFAVVHTGETRPYGNFILKKGVV 147 >UniRef50_C6AZA9 RbsD or FucU transport n=18 Tax=Alphaproteobacteria RepID=C6AZA9_RHILS Length = 158 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 3/141 (2%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK + PL+SPELL L MGHGDEI D ++P ++IR DG + +L A++ + Sbjct: 1 MLKGLDPLLSPELLLTLRAMGHGDEIAIVDGNYPGVEHARRLIRLDGHHLIPVLNAVLSV 60 Query: 61 FELDSYAPPLVMMAAV--EGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAF 118 +D + + + V E D LDP V + + P ++ + FY R + A Sbjct: 61 LPIDDFVAEAIFRSTVKAERDKLDP-VHEEMIDCCARHEPHRQVVPLIGQDFYGRVKTAH 119 Query: 119 AIVITGERAKYGNILLKKGVT 139 A++ TGE Y NI+L+KGV Sbjct: 120 ALIQTGEPRLYANIILRKGVI 140 >UniRef50_C8T2D3 Fucose operon FucU protein n=2 Tax=Enterobacteriaceae RepID=C8T2D3_KLEPR Length = 129 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 85/91 (93%), Positives = 87/91 (95%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGL VSDLLQAIIPL Sbjct: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLRVSDLLQAIIPL 60 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRN 91 FELDSYAPP+VMMAAVEGD LDP VE+RYR Sbjct: 61 FELDSYAPPVVMMAAVEGDALDPTVEQRYRR 91 >UniRef50_B3T6P2 Putative RbsD / FucU transport protein family protein n=1 Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6P2_9ZZZZ Length = 135 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 8/128 (6%) Query: 20 MGHGDEIIFSDAHFPAHSMGPQV-----IRADGLLVSDLLQAIIPLFELDSYAPPLVMMA 74 MGHGDE++ +D +FP+ S+ + I+ DGL + +L +AI+ +F LDS+ V Sbjct: 1 MGHGDELVLTDCNFPSDSVAAETVTGKFIQMDGLDIPELAKAILSVFPLDSFVSEPVFRM 60 Query: 75 AVEGDTLD-PEVERRYRNALSLQAPCP-DIIRINRFAFYERAQKAFAIV-ITGERAKYGN 131 V G + + RN L + +I I R AFYERA+ A+A+V GER YG Sbjct: 61 EVVGKPGELVGCHKDMRNILDETSDRRWEIGSIERHAFYERAKNAYAVVCAAGERRPYGC 120 Query: 132 ILLKKGVT 139 + KGV Sbjct: 121 FIFIKGVI 128 >UniRef50_UPI0000F2AEE0 PREDICTED: similar to RIKEN cDNA 1810014F10 gene n=1 Tax=Monodelphis domestica RepID=UPI0000F2AEE0 Length = 172 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%) Query: 2 LKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSM---GPQVIRADGLLVSDLLQAII 58 LK I L+SPELL LA+MGHGDEI+ +DA+FP S+ GP IRADGL V LL++I+ Sbjct: 4 LKGIPSLLSPELLFALAKMGHGDEIVLADANFPTSSICRCGPVEIRADGLSVPQLLESIL 63 Query: 59 PLFELDSYAPPLVM-MAAVEGDTLD----PEVERRYRNALSLQAPCPDIIRINR 107 L LD+Y P VM M VE D PEV + +R+ LS + I R Sbjct: 64 KLLPLDTYEPNSVMVMDVVESDKAKGLQTPEVWQTFRSLLSQTGFRMALKEITR 117 >UniRef50_D2R7C7 RbsD or FucU transport n=4 Tax=Bacteria RepID=D2R7C7_9PLAN Length = 148 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 17/150 (11%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIR------ADGLLVSD-L 53 ML+ S LI PE+ +VLA GH +I+ +D H+PA S GL+ D Sbjct: 1 MLR--STLIHPEISRVLAAAGHHAKILIADGHYPASSKKGPNATVVSMNLMPGLITCDQA 58 Query: 54 LQAIIPLFELD---SYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAF 110 LQA++ +D + P ++ D P V YR L+ ++ I+++ F Sbjct: 59 LQAVLSAVPIDEINTMNYPKDDPYTLDSD---PPVWNEYRQTLAKLGMNLELKPIDKWDF 115 Query: 111 YERAQKAFAI--VITGERAKYGNILLKKGV 138 Y+ A + + T + ++ N+LL GV Sbjct: 116 YDAVATADHVLTIQTADTQRFANLLLSIGV 145 >UniRef50_A5UTT7 RbsD or FucU transport n=5 Tax=Bacteria RepID=A5UTT7_ROSS1 Length = 139 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 21/149 (14%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIR------ADG-LLVSDL 53 ML+ LI P++L L GHG +++ +D ++P + P + A G L V+D+ Sbjct: 1 MLR--YKLIHPQILAALGGAGHGSQVLIADGNYPFATGAPASAQRVYLNLAPGLLTVTDV 58 Query: 54 LQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYER 113 L A++ ++ V +P + +R L P + + RFAFY+ Sbjct: 59 LAALVDAIPVE------AAHVMVPDAGPEPSIFTEFRALL----PYLSLQPLGRFAFYDA 108 Query: 114 AQ--KAFAIVITGERAKYGNILLKKGVTP 140 A+ ++ TGER Y NILL GV P Sbjct: 109 ARSPDTTLVIATGERRVYANILLTIGVVP 137 >UniRef50_A7BC25 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC25_9ACTO Length = 138 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 22/143 (15%) Query: 8 LISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ------VIRADGLL----VSDLLQAI 57 + P+ L+ LA GHG +I+ +DA++P + + A GLL V D+L+ Sbjct: 1 MTHPQFLRALAAAGHGSKILLADANYPHTTGVNPRCELISLNLAPGLLDVSQVLDVLKRT 60 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQK- 116 IP+ + +M A + D ++ + +R AL P + I+R+ FY+ A+ Sbjct: 61 IPIERAE------IMTPAPDADPVEIPIHDEFRAAL----PGVEFGEISRWDFYDAARDE 110 Query: 117 -AFAIVITGERAKYGNILLKKGV 138 IV TGE+ YGN+LL GV Sbjct: 111 NVGIIVATGEQRLYGNLLLTVGV 133 >UniRef50_C7ILP1 RbsD or FucU transport n=3 Tax=Clostridiales RepID=C7ILP1_9CLOT Length = 137 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 12/144 (8%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLKT I+P+L+ +LA GHGD+++ +D ++P S L ++ + + Sbjct: 1 MLKT--ACINPDLIGLLAACGHGDKVLIADGNYPLESKTANNTAKMYLGLTHGIPLATQV 58 Query: 61 FELDS---YAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQK- 116 E+ +M GD +PE+ ++ L + ++ R+ FY+ +K Sbjct: 59 LEVLGKTIAIEGAEVMVPESGD--EPEIFAEFQELLP---DGIKLSKLERYDFYDVCKKD 113 Query: 117 -AFAIVITGERAKYGNILLKKGVT 139 + TGE+ + NIL+ GV Sbjct: 114 NIKIAISTGEQRVFANILITVGVV 137 >UniRef50_A8S316 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8S316_9CLOT Length = 132 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 14/141 (9%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQV---IRADGLLVSDLLQAI 57 MLKT ++ P+L +VLAE+ H D II DA P +V R D+L+ I Sbjct: 1 MLKT--GILHPQLARVLAELRHKDTIIIGDAGLPIPKGVERVDLGWRPGDPAYLDVLEEI 58 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA 117 + ++ A E T+ P+ ++ + L P + I ER++ A Sbjct: 59 LKYIVVEGAV------FADEALTVTPDFHKKALDLLPQGLP---VEYIPHTELKERSKDA 109 Query: 118 FAIVITGERAKYGNILLKKGV 138 AIV+TGE Y N++L G Sbjct: 110 KAIVLTGEFTGYTNVILSAGC 130 >UniRef50_C9YX65 Fuscose operon fucU protein n=2 Tax=Streptomyces RepID=C9YX65_STRSW Length = 145 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 22/148 (14%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIR------ADG-LLVSDL 53 ML ++ L+ P +L+ LA GHG ++ +D H+PA + + R A G L V+ + Sbjct: 1 ML--LTDLLHPGILEALAGAGHGSRVLLADGHYPASTATGERARIVHLNLAPGLLDVTTV 58 Query: 54 LQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYER 113 L ++ ++S +M +G+ P + YR+ L+ + + RF FY+ Sbjct: 59 LDVLLRAIPIES----AHVMVPPKGEPEPPAI-AEYRDRLA----PVPVETLGRFEFYDA 109 Query: 114 AQK---AFAIVITGERAKYGNILLKKGV 138 A+ A AIV T + Y N+LL GV Sbjct: 110 ARYSDVALAIV-TADTRTYANLLLTIGV 136 >UniRef50_C0CRI2 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRI2_9FIRM Length = 136 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 20/147 (13%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAH--SMGPQVIRADGLLVS---DLLQ 55 MLK LI PEL+ LA GHG +I+ +D ++P S G ++ G V ++L Sbjct: 1 MLKG--KLIHPELIHQLALCGHGSKILIADGNYPLEEKSSGVKIFLGLGPGVPSVIEVLA 58 Query: 56 AIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQ 115 AI + E++ V D +PE+ +R L + R+ FY Sbjct: 59 AIHSVCEIE------KAQVMVPEDDREPEIFGEFRRELPDLELEELV----RYDFYAACM 108 Query: 116 KAFAI---VITGERAKYGNILLKKGVT 139 + + V TGE+ + NILL G Sbjct: 109 EEGVLKLAVSTGEQRTFANILLTVGCV 135 >UniRef50_Q15PP4 RbsD or FucU transport n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PP4_PSEA6 Length = 144 Score = 95.7 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 21/148 (14%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFP-AHSMGPQVI------RADGLLVSDL 53 MLKT +I P +L+ L GH +++ +D + P A GP R L + Sbjct: 1 MLKT--AVIHPTILEALGRSGHFAQVVIADGNLPVAAMTGPNSTLVHLNFRPGMLDALSV 58 Query: 54 LQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYE- 112 L+ I+ + + ++M + E+ Y+ L + R+AFY+ Sbjct: 59 LEGILEVCPIQG----AIVMEKPP--EANAEIHTAYQALL----GDVTWEAMERWAFYDK 108 Query: 113 -RAQKAFAIVITGERAKYGNILLKKGVT 139 RA I+ TGE+ ++ N++L GV Sbjct: 109 IRAPATTLIIQTGEQRRFANLILTVGVV 136 >UniRef50_A6WDZ4 RbsD or FucU transport n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WDZ4_KINRD Length = 144 Score = 91.5 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 6/135 (4%) Query: 7 PLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLF-ELDS 65 L+ P+LL LA GHGD ++ +D +FP + + L + L ++ + L Sbjct: 5 DLLHPQLLAGLAAAGHGDRVVLADGNFPLRAGTNPSVPVVHLNLRPGLVTVLDVLEPLLG 64 Query: 66 YAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYE--RAQKAFAIVIT 123 P D Y L +A + ++R+AFY RA +V T Sbjct: 65 AVPVEAATVMASPDGAPVPAHDDYARLLGERA---ALSAVDRWAFYAQSRADDVALVVAT 121 Query: 124 GERAKYGNILLKKGV 138 ++ N++L GV Sbjct: 122 ADQRLCANLILTVGV 136 >UniRef50_A4IT64 D-ribose pyranase n=9 Tax=Firmicutes RepID=RBSD_GEOTN Length = 132 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 9/138 (6%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M K +++ EL +LA +GH D I+ +D P + ++ A L Sbjct: 1 MKKN--GILNKELNTLLASLGHTDTIVIADCGLPIPNEEARIDLALVKGFPPFLS----- 53 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 LD+ LV+ V + + + Y + + + P I + F E ++A A+ Sbjct: 54 -VLDAVINELVVEEIVLAEEIKTQNPDVYESIKARMSDVP-IQFVRHEEFKEMTKQAKAV 111 Query: 121 VITGERAKYGNILLKKGV 138 + TGE Y NI+L+ GV Sbjct: 112 IRTGEATPYANIILRSGV 129 >UniRef50_Q54473 Regulation protein n=2 Tax=Enterobacteriaceae RepID=Q54473_SERMA Length = 138 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 22/149 (14%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ------VIRADG-LLVSDL 53 M+K S + P LL LA+ GH +++ +D ++ + P+ + A G L + Sbjct: 1 MIK--SAITHPPLLAALAQCGHKTQVLIADGNYACVTHAPKDATVVYLNLAPGTLAAPPI 58 Query: 54 LQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYER 113 L+ ++ ++S + A D + +E YR L P I + R AFY Sbjct: 59 LEKLLACINVES-----AALMACPPDFTNT-IEAEYRQLLPEHCP---IEYLPREAFYAA 109 Query: 114 AQ--KAFAIVITGERAKYGNILLKKGVTP 140 + + ++ +GER ++ N+LL V P Sbjct: 110 VKSDRTLLVIASGERRRFANLLLT--VAP 136 >UniRef50_A7GLA2 D-ribose pyranase n=3 Tax=Bacteria RepID=RBSD_BACCN Length = 131 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 7/134 (5%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDS 65 +++ E+ +LA +GH D I+ +D P ++ A L L ++ + D Sbjct: 4 HGVLNSEIAAILAALGHTDTIVIADCGLPIPDSVKRIDLAVELGKPSFLD-VLQVVIEDM 62 Query: 66 YAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGE 125 + + + + R + + + + F E+ ++A AI+ TGE Sbjct: 63 AIEKVTVAEEITTNN------REIYKEIETRLKEANFEYVLHEEFKEKTKQAKAIIRTGE 116 Query: 126 RAKYGNILLKKGVT 139 Y NI+L GV Sbjct: 117 ATPYANIILHAGVI 130 >UniRef50_A5F1C1 D-ribose pyranase n=292 Tax=Bacteria RepID=RBSD_VIBC3 Length = 139 Score = 75.7 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 3/136 (2%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDS 65 S L++ EL ++A +GH DEI DA P ++ A V L+ + + +S Sbjct: 4 STLLNSELSYLVATLGHTDEITICDAGLPIPDEVTRIDLALTHGVPSFLETVRVILS-ES 62 Query: 66 YAPPLVMMA--AVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVIT 123 +++ A L + R + L I I+ AF +R ++ A+V T Sbjct: 63 QIESVIVAQEFAQVSPVLHEALYRELKAEEQLCGKPIAIQYISHEAFKQRTLQSRAVVRT 122 Query: 124 GERAKYGNILLKKGVT 139 GE Y N++ + GV Sbjct: 123 GECTPYANVIFQAGVV 138 >UniRef50_A0Q217 D-ribose pyranase n=80 Tax=Firmicutes RepID=RBSD_CLONN Length = 131 Score = 75.7 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 15/142 (10%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVS---DLLQAI 57 M KT PL++ + +V+++MGH D I D+ P ++ A V L+A+ Sbjct: 1 MKKT--PLLNSSICEVVSKMGHTDMIAIGDSGLPIPDDTKRIDLALIKGVPTFMQTLKAV 58 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA 117 + L+ +++ + EV + + I I+ + Sbjct: 59 L----LEQQVEEVIIAHETK------EVSPETFENIKKEIGDVKITFISHEELKKELSNC 108 Query: 118 FAIVITGERAKYGNILLKKGVT 139 A++ TGE+ Y NI+LK GV Sbjct: 109 KAVIRTGEQTPYANIILKSGVV 130 >UniRef50_Q65E56 D-ribose pyranase n=11 Tax=Bacillales RepID=RBSD_BACLD Length = 131 Score = 74.1 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 7/134 (5%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDS 65 +++ + K+LA++GH D I+ +DA P P++ A L + + L + Sbjct: 4 HGILNSHIAKLLADLGHTDTIVIADAGLPVPPGVPKIDLALTLGTP-GFREVTKLIADEM 62 Query: 66 YAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGE 125 + +E V L + I I AF + +A A++ TGE Sbjct: 63 VVEKVTAAQEIES------VNPGQAAFLKAEFSNQKIDYIPHEAFKKATSQAKAVIRTGE 116 Query: 126 RAKYGNILLKKGVT 139 Y N +L GV Sbjct: 117 ATPYANCILHAGVI 130 >UniRef50_A5INL8 D-ribose pyranase n=8 Tax=Thermotogaceae RepID=RBSD_THEP1 Length = 135 Score = 71.8 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 9/136 (6%) Query: 7 PLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQV---IRADGLLVSDLLQAIIPLFEL 63 +++ + +++A MGH D + D FP +V + + ++++ I+ E+ Sbjct: 5 GILNSTISEMVANMGHTDMLAIVDMGFPIPDGAKKVDLVVDKGKPGLLEVVEVILKELEV 64 Query: 64 DSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVIT 123 + A E + +PE N + I + F + ++ + V T Sbjct: 65 EKII------LAEEMNEKNPETRDLLINLVGKNNSNVKIEFVPHEEFKKISRTSKGFVRT 118 Query: 124 GERAKYGNILLKKGVT 139 G Y N++L GV Sbjct: 119 GADRPYSNVILVSGVI 134 >UniRef50_C5EWH0 High affinity ribose transport protein RbsD n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWH0_9FIRM Length = 136 Score = 69.9 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 16/143 (11%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK +I+ ++ ++A +GH D I +DA + S P++ A + +LL Sbjct: 1 MLK--HGIINADIKYLMASLGHRDRIAITDAGYNVPSGIPKIDIAFLPGMPELLPI---- 54 Query: 61 FELDSYAPPLVMMAAVEGD---TLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA 117 LD + + V + ++ P++ YR + P I I F E + Sbjct: 55 --LDGVLDEIAVEQVVLAEEIKSMSPKLHEEYR----KRFPEKKICYIPHSEFDEVIKDV 108 Query: 118 FAIVITGERAKYG-NILLKKGVT 139 ++ TG+ + NI+L+ G T Sbjct: 109 KGVIRTGQYGLHAPNIILQAGCT 131 >UniRef50_A8F3M5 D-ribose pyranase n=1 Tax=Thermotoga lettingae TMO RepID=RBSD_THELT Length = 140 Score = 69.5 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 14/142 (9%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLV---SDLLQAI 57 M K +++ EL ++A MGHGD + D+ FP + V D L+ +++ I Sbjct: 1 MKKN--GILNRELSYLIASMGHGDILSIVDSGFP---ISEDVFCVDLSLIAGKPKIVEII 55 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA 117 IPL E + +++ ++ + P+ ++ + I I F +R +++ Sbjct: 56 IPLLE-ELEIEKVLIAEEIK--MISPKYHQKLLSIFPKN---VQIEYIPHEKFKDRVRES 109 Query: 118 FAIVITGERAKYGNILLKKGVT 139 +V TGE+ Y +++L GVT Sbjct: 110 KGVVRTGEQTSYSSVILVGGVT 131 >UniRef50_UPI0001903CC7 fucose dissimilation pathway protein n=2 Tax=cellular organisms RepID=UPI0001903CC7 Length = 79 Score = 68.7 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 75 AVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGERAKYGNILL 134 E D LDP V + + P ++ + FY R + A A++ T E Y NI++ Sbjct: 1 KAERDKLDP-VHEEMIDCCARHEPHRQVVPLVGQDFYGRVRAAHALIQTSEPRLYANIIM 59 Query: 135 KKGVT 139 +KGV Sbjct: 60 RKGVI 64 >UniRef50_B1VU78 D-ribose pyranase 2 n=10 Tax=Actinobacteria (class) RepID=RBSD2_STRGG Length = 129 Score = 68.3 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 17/137 (12%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVI----RADGLLVSDLLQAIIPLF 61 S +++ L +AE+GHGD ++ DA P GP+VI RA +++L ++ Sbjct: 4 SGILNRHLAGAIAELGHGDTVLVCDAGMPIP-PGPRVIDLAFRAGTPSFAEVLDGLLDEL 62 Query: 62 ELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIV 121 ++ + A +V P + + R A +V Sbjct: 63 VVEGATAAEEIRDANPDAAALLDVH------------FPWLEAVPHDELKARTAAARLVV 110 Query: 122 ITGERAKYGNILLKKGV 138 TGE Y N+LL+ GV Sbjct: 111 RTGEARPYANVLLRCGV 127 >UniRef50_C3JZP4 D-ribose pyranase n=3 Tax=Proteobacteria RepID=RBSD_PSEFS Length = 134 Score = 66.4 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 12/142 (8%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQA---I 57 M KT PL++ L +V+A +GHGD ++ DA P + A + D + A + Sbjct: 1 MKKT--PLLNIALSRVIASLGHGDILVIGDAGLPVPPGVELIDLALTQGIPDFISALRIV 58 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA 117 + +++S+ ++ P N LS +A + ++ AF + ++KA Sbjct: 59 LSEMQVESHVLAEEILLK------QPPALNE-LNTLSDEAALGERRLVSHEAFKQLSRKA 111 Query: 118 FAIVITGERAKYGNILLKKGVT 139 A+V TGE Y NI L GVT Sbjct: 112 RAVVRTGECQPYCNIALVSGVT 133 >UniRef50_B5YY06 D-ribose pyranase n=72 Tax=Bacteria RepID=RBSD_ECO5E Length = 139 Score = 64.5 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 60/143 (41%), Gaps = 9/143 (6%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M K +++ ++ V++ +GH D ++ DA P ++ A V +Q ++ + Sbjct: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGV 57 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSL----QAPCPDIIRINRFAFYERAQK 116 + ++ ++ P++ L Q +I F ++ + Sbjct: 58 VTNEMQVEAAIIAEEIKHHN--PQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAE 115 Query: 117 AFAIVITGERAKYGNILLKKGVT 139 + A++ +GE + Y NI+L GVT Sbjct: 116 SQAVIRSGECSPYANIILCAGVT 138 >UniRef50_Q1R0M9 RbsD or FucU transport n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1R0M9_CHRSD Length = 144 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 9/122 (7%) Query: 25 EIIFSDAHFPAHSMGPQVIRADGLLVSDLL---QAIIPLFELDSYAPPLV-MMAAVEGDT 80 +I+ +DA +P + P L + + + QA++ S A + MA EG Sbjct: 23 KILVADALYPHSTGAPATASRVYLNLCEGMVPAQAVMDAVS-QSVAVEAITFMATAEGKA 81 Query: 81 LDPEVERRYRNALSLQAPCPDII--RINRFAFYE--RAQKAFAIVITGERAKYGNILLKK 136 + V+ + R A I + R+AFY+ RA ++ TGER Y N LL Sbjct: 82 SETVVDCQQRLAGHRHGNGQTIAWSGLERWAFYDACRAPDVCLLIATGERRPYSNFLLTI 141 Query: 137 GV 138 GV Sbjct: 142 GV 143 >UniRef50_D2BEN5 RbsD n=5 Tax=Actinomycetales RepID=D2BEN5_STRRD Length = 129 Score = 61.4 bits (148), Expect = 8e-09, Method: Composition-based stats. Identities = 35/136 (25%), Positives = 51/136 (37%), Gaps = 17/136 (12%) Query: 7 PLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVS---DLLQAIIPLFEL 63 +++ L LA +GH DE++ D+ P V A + D+L I+ Sbjct: 5 GILNAALSGGLARLGHTDELLVCDSGMPLPPGVEVVDLAFLPGIPAFADVLDGILAEL-- 62 Query: 64 DSYAPPLVMMAAVEGDTLDPEVE-RRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVI 122 VEG T EV L A P + I ++ + IV Sbjct: 63 -----------VVEGATAAREVRTANAECDALLAARLPGLTYIPHSELKRLSRSSRLIVR 111 Query: 123 TGERAKYGNILLKKGV 138 TGE Y N+LL+ GV Sbjct: 112 TGEARPYANVLLRCGV 127 >UniRef50_A4J7I2 D-ribose pyranase n=5 Tax=Bacteria RepID=RBSD_DESRM Length = 130 Score = 61.4 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 63/132 (47%), Gaps = 8/132 (6%) Query: 7 PLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSY 66 ++ +L ++A +GH D I+ +D+ P P + L V+ + ++P+ ++ Y Sbjct: 5 GVLHRDLAALIASLGHRDAIVVADSGLP----VPPGVNCIDLAVTKGIPPLLPVLQVILY 60 Query: 67 APPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGER 126 +V+ V D L +V + +++ + + ++ +Q+A A++ TGE Sbjct: 61 --EMVVERVVIADEL--QVNQSLVKSIADEVTPVSLEVVSHEQLKSLSQRARAVIRTGEW 116 Query: 127 AKYGNILLKKGV 138 Y N++L GV Sbjct: 117 TPYANVILYSGV 128 >UniRef50_Q4KEW9 D-ribose pyranase n=18 Tax=Bacteria RepID=RBSD_PSEF5 Length = 134 Score = 61.0 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 6/139 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M KT PL++ L +++A +GHGD ++ DA P + A V D L + + Sbjct: 1 MKKT--PLLNIALSRLIASLGHGDIVVIGDAGLPVPPGVELIDLALTHGVPDFLT-TLKV 57 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 + V+ + P ++ +N F +++A A+ Sbjct: 58 LLSEMQVERHVLAEEILLKQPTP---LAALEGMTAGGELGQRQLMNHEDFKVLSRQARAV 114 Query: 121 VITGERAKYGNILLKKGVT 139 + TGE Y NI L GVT Sbjct: 115 IRTGECQPYCNIALIAGVT 133 >UniRef50_B4U1H5 High affinity ribose transport protein RbsD n=3 Tax=Lactobacillales RepID=B4U1H5_STREM Length = 135 Score = 60.6 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 54/134 (40%), Gaps = 6/134 (4%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDS 65 +++ ++ K+ A++GH D + D P P++ L + L + + L Sbjct: 7 HGILNSDVAKLAADLGHTDRVCIGDLGLPVPVGVPKI----DLALKRGLPSFQDV--LGM 60 Query: 66 YAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGE 125 Y +V+ + + + + L+ + ++ + A++ TGE Sbjct: 61 YLEHVVIEKVILAEEIKTANPDQLAAILTQLDDTVAVEYVSHEELKALNKSVKAVIRTGE 120 Query: 126 RAKYGNILLKKGVT 139 Y NI+L+ GVT Sbjct: 121 DTPYSNIILQSGVT 134 >UniRef50_C8WRM8 RbsD or FucU transport n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRM8_ALIAD Length = 131 Score = 60.3 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 18/138 (13%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFE--- 62 S ++ L +++AE+GHG+ I +D P G+ + DL AI P Sbjct: 4 SGILHGRLSQIIAELGHGELIAVADCGLPIP---------PGIELVDL--AIKPGMPSFL 52 Query: 63 --LDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 D+ LV+ + + L + I F + + ++ Sbjct: 53 DVCDTILTELVVEDFIVANELAIRGSGVVDHLRERAGVLGKF--IPHSDFKQTLRNVRSV 110 Query: 121 VITGERAKYGNILLKKGV 138 V TGE Y N++ GV Sbjct: 111 VRTGEWTPYANVIFVAGV 128 >UniRef50_C5VEK7 High affinity ribose transport protein RbsD n=2 Tax=Corynebacterium matruchotii RepID=C5VEK7_9CORY Length = 125 Score = 60.3 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 19/136 (13%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGP--QVIRADG-LLVSDLLQAIIPLFE 62 L++P+L + +A +GH D D P + G + +AI+ Sbjct: 4 DGLLNPQLNQAIARLGHTDTFAICDCGLPLPPQARIIDLTLIHGVPSFEQVAEAILK--- 60 Query: 63 LDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVI 122 V++ V T P+V N L AP I +I+ F ++ +V Sbjct: 61 -------EVVIEKVTIATQTPDV---IINTLPADAP---ITKIDHEDFKKQINDCTFVVR 107 Query: 123 TGERAKYGNILLKKGV 138 TG Y N + GV Sbjct: 108 TGSTTPYANAIYYCGV 123 >UniRef50_Q6ABP6 D-ribose pyranase n=7 Tax=Actinobacteridae RepID=RBSD_PROAC Length = 127 Score = 59.1 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 17/136 (12%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVS---DLLQAIIPLFE 62 S L++P+L +A +GH + +DA P P + A L ++ AI+ Sbjct: 4 SGLLNPQLCAAVARLGHTQTFVVADAGLPIPHEVPVIDLAVVLGTPRFQEVFDAILDEVV 63 Query: 63 LDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVI 122 +D A E +PE R R ++ ++ + +V Sbjct: 64 VDG------ATIAHEALGHEPESWVRERIE--------EVHTVSHEDLKKALPNVSFVVR 109 Query: 123 TGERAKYGNILLKKGV 138 TGE Y N++++ GV Sbjct: 110 TGETTPYSNVIVRCGV 125 >UniRef50_B1JKB6 RbsD or FucU transport n=22 Tax=Yersinia RepID=B1JKB6_YERPY Length = 167 Score = 58.7 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 4/129 (3%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDS 65 ++ PEL LA +GH D I+ +DA FP ++ D+L I+ + + Sbjct: 4 DRILHPELAAALATLGHTDIILVTDAGFPIPPQAKRIDLGFWPGTVDVLD-ILRVLRKEI 62 Query: 66 YAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGE 125 + + + V P++ R + + ++ A +A ++ +G Sbjct: 63 FVEEVRFASEV--RDCHPQLYRDVQTLYTGSGAEFQAASHETLC-HDLAYQAKVVIRSGS 119 Query: 126 RAKYGNILL 134 + N L Sbjct: 120 FNPWANFAL 128 >UniRef50_B4UZK2 FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=2 Tax=Streptomyces RepID=B4UZK2_9ACTO Length = 131 Score = 58.3 bits (140), Expect = 7e-08, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 7 PLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQV---IRADGLLVSDLLQAIIPLFEL 63 +I EL ++A + H D + SDA P P V R D++Q ++ Sbjct: 5 GIIHRELAGLIAGLRHTDTFVISDAGLPLAPDTPVVDLGYRYGQSPFLDVIQTVLN---- 60 Query: 64 DSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVIT 123 + + + ++P V R+ D I+ F R + V T Sbjct: 61 EIVVEHSWVTDKI--REVNPTVHTGLRSF------GLDPEPIDHDQFKARVRDVKFAVRT 112 Query: 124 GERAKYGNILLKKGV 138 GE Y N+LL+ GV Sbjct: 113 GEDTFYANVLLRAGV 127 >UniRef50_C9KQ30 Ribose ABC transporter protein RbsD n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ30_9FIRM Length = 131 Score = 57.6 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 13/137 (9%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVS---DLLQAIIPLFE 62 ++ EL + +A +GH D + DA P + A V +L A++ E Sbjct: 4 HGVLHAELSRCIAALGHKDLFMIGDAGMPIPPGVEIIDLAVTAGVPTFRQVLDAVLEEAE 63 Query: 63 LDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVI 122 ++ Y A E T + + L + + KA + Sbjct: 64 VEGY------YLADEIRTHNEPQHAYLQQKLK----GVPAEYMPHDELKTFSAKAKFAIR 113 Query: 123 TGERAKYGNILLKKGVT 139 TGE + Y N++L+ GV Sbjct: 114 TGEFSPYPNVILRAGVV 130 >UniRef50_Q02XM8 D-ribose pyranase n=23 Tax=Firmicutes RepID=RBSD_LACLS Length = 132 Score = 57.6 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 8/138 (5%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M K + +++ EL K+ ++GH D++ D P S ++ A + Sbjct: 1 MKKEV--ILNSELAKIADDLGHTDQVCIGDLGLPVPSGVKKIDLALTRGKPTFQE----- 53 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 LD Y +++ D + + + L+ + +++ ++ A+ Sbjct: 54 -VLDIYLENILVEKIYLADEIKENNPEQLKILLTKLSADVEVVFVSHETLKLMNHDVKAV 112 Query: 121 VITGERAKYGNILLKKGV 138 V TGE Y NI+L+ GV Sbjct: 113 VRTGENTPYSNIILQSGV 130 >UniRef50_Q1AUT6 D-ribose pyranase 2 n=5 Tax=Actinobacteria (class) RepID=RBSD2_RUBXD Length = 154 Score = 56.4 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 50/134 (37%), Gaps = 8/134 (5%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDS 65 S +++ L +LA GH D ++ DA FP +V A + D L+ ++ L + Sbjct: 4 SGILNQPLSNILASFGHTDLLVVCDAGFPIPRDAQRVDLAIAPDLPD-LRTVLSLINEEF 62 Query: 66 YAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFA-FYERAQKAFAIVITG 124 +V+ + L + R + A A AIV TG Sbjct: 63 ITEKVVIAEEMAEFNPPLHGW------LQKHFSGVEFERRPHEEMLTQVATSAKAIVRTG 116 Query: 125 ERAKYGNILLKKGV 138 +GNI L GV Sbjct: 117 AFDPWGNIGLVSGV 130 >UniRef50_B1ZN30 RbsD or FucU transport n=2 Tax=Chlamydiae/Verrucomicrobia group RepID=B1ZN30_OPITP Length = 129 Score = 54.9 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 55/138 (39%), Gaps = 16/138 (11%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFP----AHSMGPQVIRADGLLVSDLLQA 56 M++T +++P +L +LA + H + ++ +D FP ++ ++ D V +L A Sbjct: 1 MIRT--GILNPAVLSLLARVRHTNTVVVADRGFPLWPQIETVDLSLVD-DVPTVRQVLDA 57 Query: 57 IIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQK 116 I+P Y + P V R+ ++ F R Sbjct: 58 ILP-----QYVIGRIFAEEEFRQVNSPSVVEALRD----HTGAIPLVFEPHVEFKRRVPH 108 Query: 117 AFAIVITGERAKYGNILL 134 A ++ TG+ Y N++L Sbjct: 109 AIGLIRTGDSTPYANLIL 126 >UniRef50_D1BIP0 ABC-type ribose transport system, auxiliary component n=3 Tax=Actinomycetales RepID=D1BIP0_SANKS Length = 127 Score = 48.3 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 46/136 (33%), Gaps = 17/136 (12%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVS---DLLQAIIPLFE 62 S +++P L + LA +GHG ++ D P V + V +L A++ Sbjct: 4 SGVLNPALAEGLARLGHGHLVLVVDCGTPIPPGARVVDVSVVAGVPGFTQVLDAVLDEIV 63 Query: 63 LDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVI 122 ++ E R P D+ + A ++ Sbjct: 64 VEGSVAAS------ESAGTVVAGWLEERGLSPELVPHEDLKAL--------LPGAALVIR 109 Query: 123 TGERAKYGNILLKKGV 138 TGE + N+ L+ GV Sbjct: 110 TGEATAWANVGLRCGV 125 >UniRef50_A3DCF4 RbsD or FucU transport n=4 Tax=Clostridiales RepID=A3DCF4_CLOTH Length = 151 Score = 44.5 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 49/130 (37%), Gaps = 7/130 (5%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDS 65 + +++ ++ LA++GH D ++ +DA + + + + + ++ + Sbjct: 14 TGILNRDIAAELAKLGHTDRVLIADAGLAIPNTTKVIDVSLDVNFPTTVD-VLKVLLKHF 72 Query: 66 YAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYE-RAQKAFAIVITG 124 L++ A + P + Y + PC + + ++ + TG Sbjct: 73 SVEKLILSQATV--DVSPSRYKEYLSLFDESVPC---EIVEHSTLRDTLTKEVKFAIRTG 127 Query: 125 ERAKYGNILL 134 + NI+L Sbjct: 128 DFTANSNIIL 137 >UniRef50_C3RHV1 Predicted protein n=2 Tax=Bacteria RepID=C3RHV1_9MOLU Length = 156 Score = 40.6 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 18/140 (12%) Query: 8 LISPELLKVLAEMGHGDEIIFSDAH--------FPAHSMGPQVIRADGLLVSDLLQAIIP 59 ++ L V+A + HG+ + +DA +P S + + Sbjct: 7 ILHERLAAVVASLRHGEMLFIADAGSGTSSKALYPLDSSVEYIDVEVVTGSPSFEDIVTT 66 Query: 60 LFELDSYAPPLV--MMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA 117 L + +V M V+ V+ + + P +YE + Sbjct: 67 LVACGDFEGAIVTEDMIEVDQKDYQLLVDLLGKKNIHSMHYIP--------EYYEMRDRC 118 Query: 118 FAIVITGERAKYGNILLKKG 137 A+V TG+ + +L G Sbjct: 119 KAVVQTGDYGVHAQAILIAG 138 >UniRef50_C9Z5Q7 Putative carbohydrate transport protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z5Q7_STRSW Length = 77 Score = 40.2 bits (93), Expect = 0.021, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 21/43 (48%) Query: 96 QAPCPDIIRINRFAFYERAQKAFAIVITGERAKYGNILLKKGV 138 + PD+ + E A A IV TGE Y N+LL+ GV Sbjct: 33 EDRFPDLEPVTHETLKEPAAGARLIVWTGEARPYANVLLRCGV 75 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B1I9X5 Fucose operon FucU protein n=25 Tax=Bacteria Rep... 175 3e-43 UniRef50_C7T7P0 Fucose operon protein n=2 Tax=Lactobacillus rham... 171 9e-42 UniRef50_A9KR29 RbsD or FucU transport n=13 Tax=cellular organis... 170 1e-41 UniRef50_A2VDF0 Protein fucU homolog n=34 Tax=Metazoa RepID=CJ12... 169 3e-41 UniRef50_B7GNK7 RbsD or FucU transport n=26 Tax=Bacteria RepID=B... 166 2e-40 UniRef50_B7GNN9 RbsD or FucU transport n=7 Tax=Bacteria RepID=B7... 164 1e-39 UniRef50_B5ZNU4 RbsD or FucU transport n=10 Tax=Alphaproteobacte... 164 1e-39 UniRef50_A7VPL4 Putative uncharacterized protein n=1 Tax=Clostri... 162 4e-39 UniRef50_C1BNJ8 FucU homolog n=2 Tax=Caligus rogercresseyi RepID... 160 1e-38 UniRef50_C2KRR0 Ribose ABC superfamily ATP binding cassette tran... 159 2e-38 UniRef50_B8F6Y2 L-fucose mutarotase n=150 Tax=Bacteria RepID=FUC... 159 2e-38 UniRef50_A0B319 RbsD or FucU transport n=85 Tax=Proteobacteria R... 157 1e-37 UniRef50_B0NEL3 Putative uncharacterized protein n=1 Tax=Clostri... 155 4e-37 UniRef50_Q12BF4 RbsD or FucU transport n=6 Tax=Proteobacteria Re... 153 2e-36 UniRef50_A8RJ38 Putative uncharacterized protein n=1 Tax=Clostri... 151 8e-36 UniRef50_C4LFS0 RbsD or FucU transport n=1 Tax=Tolumonas auensis... 149 3e-35 UniRef50_Q2K1E4 Fucose dissimilation pathway protein n=5 Tax=Rhi... 146 2e-34 UniRef50_B9K570 Putative uncharacterized protein n=1 Tax=Agrobac... 142 3e-33 UniRef50_A5F1C1 D-ribose pyranase n=292 Tax=Bacteria RepID=RBSD_... 142 3e-33 UniRef50_B1Y3G2 RbsD or FucU transport n=8 Tax=Proteobacteria Re... 141 6e-33 UniRef50_A7GLA2 D-ribose pyranase n=3 Tax=Bacteria RepID=RBSD_BACCN 140 1e-32 UniRef50_A4IT64 D-ribose pyranase n=9 Tax=Firmicutes RepID=RBSD_... 138 6e-32 UniRef50_Q65E56 D-ribose pyranase n=11 Tax=Bacillales RepID=RBSD... 137 8e-32 UniRef50_A0NM05 Fucose dissimilation pathway protein n=1 Tax=Lab... 137 8e-32 UniRef50_B5YY06 D-ribose pyranase n=72 Tax=Bacteria RepID=RBSD_E... 136 3e-31 UniRef50_A0Q217 D-ribose pyranase n=80 Tax=Firmicutes RepID=RBSD... 134 1e-30 UniRef50_Q8R2K1-3 Isoform 3 of Protein fucU homolog n=1 Tax=Mus ... 134 1e-30 UniRef50_C6AR62 RbsD or FucU transport n=2 Tax=Rhizobium legumin... 134 1e-30 UniRef50_C5C446 RbsD or FucU transport n=1 Tax=Beutenbergia cave... 132 3e-30 UniRef50_UPI00019065E7 fucose dissimilation pathway protein n=1 ... 131 8e-30 UniRef50_Q89HT9 Bll5900 protein n=1 Tax=Bradyrhizobium japonicum... 130 1e-29 UniRef50_C6AZA9 RbsD or FucU transport n=18 Tax=Alphaproteobacte... 130 1e-29 UniRef50_C5EN53 Putative uncharacterized protein n=1 Tax=Clostri... 129 2e-29 UniRef50_B3T6P2 Putative RbsD / FucU transport protein family pr... 129 3e-29 UniRef50_B4U1H5 High affinity ribose transport protein RbsD n=3 ... 128 4e-29 UniRef50_C9Y9X7 Putative uncharacterized protein n=1 Tax=Curviba... 127 8e-29 UniRef50_C3JZP4 D-ribose pyranase n=3 Tax=Proteobacteria RepID=R... 126 2e-28 UniRef50_A5INL8 D-ribose pyranase n=8 Tax=Thermotogaceae RepID=R... 126 2e-28 UniRef50_Q4KEW9 D-ribose pyranase n=18 Tax=Bacteria RepID=RBSD_P... 126 2e-28 UniRef50_Q8GBR6 Putative FucU homolog (Fragment) n=1 Tax=Trepone... 124 7e-28 UniRef50_A8F3M5 D-ribose pyranase n=1 Tax=Thermotoga lettingae T... 124 1e-27 UniRef50_Q02XM8 D-ribose pyranase n=23 Tax=Firmicutes RepID=RBSD... 124 1e-27 UniRef50_Q1AUT6 D-ribose pyranase 2 n=5 Tax=Actinobacteria (clas... 121 8e-27 UniRef50_A8S316 Putative uncharacterized protein n=2 Tax=Clostri... 121 1e-26 UniRef50_A4J7I2 D-ribose pyranase n=5 Tax=Bacteria RepID=RBSD_DESRM 120 1e-26 UniRef50_C9KQ30 Ribose ABC transporter protein RbsD n=1 Tax=Mits... 119 3e-26 UniRef50_B1VU78 D-ribose pyranase 2 n=10 Tax=Actinobacteria (cla... 119 4e-26 UniRef50_C8WRM8 RbsD or FucU transport n=2 Tax=Alicyclobacillus ... 117 8e-26 UniRef50_C5EWH0 High affinity ribose transport protein RbsD n=1 ... 117 8e-26 UniRef50_UPI0000F2AEE0 PREDICTED: similar to RIKEN cDNA 1810014F... 116 2e-25 UniRef50_C8T2D3 Fucose operon FucU protein n=2 Tax=Enterobacteri... 116 3e-25 UniRef50_Q6ABP6 D-ribose pyranase n=7 Tax=Actinobacteridae RepID... 114 6e-25 UniRef50_C5VEK7 High affinity ribose transport protein RbsD n=2 ... 113 2e-24 UniRef50_D2BEN5 RbsD n=5 Tax=Actinomycetales RepID=D2BEN5_STRRD 112 3e-24 UniRef50_B1JKB6 RbsD or FucU transport n=22 Tax=Yersinia RepID=B... 112 4e-24 UniRef50_B4UZK2 FAD-dependent pyridine nucleotide-disulphide oxi... 108 5e-23 UniRef50_C7ILP1 RbsD or FucU transport n=3 Tax=Clostridiales Rep... 108 6e-23 UniRef50_D2R7C7 RbsD or FucU transport n=4 Tax=Bacteria RepID=D2... 107 1e-22 UniRef50_A5UTT7 RbsD or FucU transport n=5 Tax=Bacteria RepID=A5... 106 2e-22 UniRef50_A7BC25 Putative uncharacterized protein n=1 Tax=Actinom... 104 7e-22 UniRef50_Q15PP4 RbsD or FucU transport n=1 Tax=Pseudoalteromonas... 102 3e-21 UniRef50_A6WDZ4 RbsD or FucU transport n=1 Tax=Kineococcus radio... 101 7e-21 UniRef50_D1BIP0 ABC-type ribose transport system, auxiliary comp... 100 1e-20 UniRef50_C0CRI2 Putative uncharacterized protein n=1 Tax=Blautia... 99 3e-20 UniRef50_A3DCF4 RbsD or FucU transport n=4 Tax=Clostridiales Rep... 98 8e-20 UniRef50_B1ZN30 RbsD or FucU transport n=2 Tax=Chlamydiae/Verruc... 96 4e-19 UniRef50_C9YX65 Fuscose operon fucU protein n=2 Tax=Streptomyces... 89 3e-17 UniRef50_Q54473 Regulation protein n=2 Tax=Enterobacteriaceae Re... 89 4e-17 UniRef50_Q1R0M9 RbsD or FucU transport n=1 Tax=Chromohalobacter ... 87 1e-16 UniRef50_UPI0001903CC7 fucose dissimilation pathway protein n=2 ... 68 1e-10 Sequences not found previously or not previously below threshold: UniRef50_A7WXT5 D-ribose pyranase n=77 Tax=Bacilli RepID=RBSD_STAA1 85 6e-16 UniRef50_B9E9Z6 Putative uncharacterized protein n=1 Tax=Macroco... 69 6e-11 UniRef50_C3RHV1 Predicted protein n=2 Tax=Bacteria RepID=C3RHV1_... 67 1e-10 UniRef50_C9Z5Q7 Putative carbohydrate transport protein n=1 Tax=... 56 3e-07 UniRef50_Q98PW9 HIGH AFFINITY RIBOSE TRANSPORT PROTEIN RBSD n=1 ... 49 6e-05 UniRef50_B2UPT8 Putative uncharacterized protein n=1 Tax=Akkerma... 38 0.087 >UniRef50_B1I9X5 Fucose operon FucU protein n=25 Tax=Bacteria RepID=B1I9X5_STRPI Length = 146 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 61/140 (43%), Positives = 84/140 (60%), Gaps = 1/140 (0%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK I ISP+LLK L EMGHGDEI+ +DA++P+ S ++IR DG+ + +LL +I+ L Sbjct: 1 MLKHIPKNISPDLLKTLMEMGHGDEIVLADANYPSASCANKLIRCDGVNIPELLDSILYL 60 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQA-PCPDIIRINRFAFYERAQKAFA 119 LDSY + V P++ YR + I + R FYER++KA+A Sbjct: 61 MPLDSYVDSSIQFMNVVSGDDIPKIWGTYRQMIEGHGTDLKTITYLRREDFYERSKKAYA 120 Query: 120 IVITGERAKYGNILLKKGVT 139 IV TGE + Y NI+LKKGV Sbjct: 121 IVATGETSLYANIILKKGVV 140 >UniRef50_C7T7P0 Fucose operon protein n=2 Tax=Lactobacillus rhamnosus RepID=C7T7P0_LACRG Length = 145 Score = 171 bits (433), Expect = 9e-42, Method: Composition-based stats. Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 5/144 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK I +SPEL+K L EMGHGDEI+ +DA++PA++ VIRADGL V DLLQ I+ L Sbjct: 1 MLKNIPKRLSPELVKTLMEMGHGDEILLADANYPANTNHDHVIRADGLTVLDLLQDILVL 60 Query: 61 FELDSYAP-PLVMMAAVEGDTL----DPEVERRYRNALSLQAPCPDIIRINRFAFYERAQ 115 LDSYA ++ V GD +P V +YR ++ + RF FYE ++ Sbjct: 61 MPLDSYADYQAIVQEVVPGDKHVPNGEPPVWHQYRTEIAKSFSDYQFKSLERFEFYEHSK 120 Query: 116 KAFAIVITGERAKYGNILLKKGVT 139 + FAIV TG++A YGN++LKKGV Sbjct: 121 QCFAIVQTGDQALYGNLILKKGVI 144 >UniRef50_A9KR29 RbsD or FucU transport n=13 Tax=cellular organisms RepID=A9KR29_CLOPH Length = 148 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 5/144 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ--VIRADGLLVSDLLQAII 58 ML I ++SPELLKVL EMGH D I+ +D +FPA S+G VIR DG V LL AI+ Sbjct: 1 MLNKIPKILSPELLKVLCEMGHSDRIVIADGNFPAQSVGKDAIVIRCDGHDVPSLLSAIL 60 Query: 59 PLFELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALSL--QAPCPDIIRINRFAFYERAQ 115 +F LD+Y P ++M V GDT++ + Y+ + + I I RFAFYE A+ Sbjct: 61 TVFPLDTYVDKPALLMEKVPGDTVETPIWEEYKKIVGQFDERGEKAIGSIERFAFYEEAK 120 Query: 116 KAFAIVITGERAKYGNILLKKGVT 139 KA+AI+ TGE+A Y NI+L+KGV Sbjct: 121 KAYAIIATGEKALYANIILQKGVV 144 >UniRef50_A2VDF0 Protein fucU homolog n=34 Tax=Metazoa RepID=CJ125_HUMAN Length = 154 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 69/145 (47%), Positives = 89/145 (61%), Gaps = 7/145 (4%) Query: 2 LKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSM---GPQVIRADGLLVSDLLQAII 58 LK + L+SPELL LA MGHGDEI+ +D +FPA S+ GP IRADGL + LL+A++ Sbjct: 4 LKGVPALLSPELLYALARMGHGDEIVLADLNFPASSICQCGPMEIRADGLGIPQLLEAVL 63 Query: 59 PLFELDSYAP-PLVMMAAVEGD---TLDPEVERRYRNALSLQAPCPDIIRINRFAFYERA 114 L LD+Y P +M V D L V Y + L + +I RF FYERA Sbjct: 64 KLLPLDTYVESPAAVMELVPSDKERGLQTPVWTEYESILRRAGCVRALAKIERFEFYERA 123 Query: 115 QKAFAIVITGERAKYGNILLKKGVT 139 +KAFA+V TGE A YGN++L+KGV Sbjct: 124 KKAFAVVATGETALYGNLILRKGVL 148 >UniRef50_B7GNK7 RbsD or FucU transport n=26 Tax=Bacteria RepID=B7GNK7_BIFLI Length = 148 Score = 166 bits (420), Expect = 2e-40, Method: Composition-based stats. Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ--VIRADGLLVSDLLQAII 58 MLK I +I PELLKVL EMGHGD+++ +D +FPA S+G V+R DG ++L+AI+ Sbjct: 1 MLKGIPKIIPPELLKVLCEMGHGDQLVIADGNFPAESIGKNAIVVRMDGHGGGEILKAIL 60 Query: 59 PLFELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALSLQA--PCPDIIRINRFAFYERAQ 115 +F LD+Y P +M V GDT+ + Y + I + RFAFYE+A+ Sbjct: 61 TVFPLDTYVDKPATLMEKVPGDTVATPIWDVYAGLIKEHDERGADAIGSLERFAFYEQAK 120 Query: 116 KAFAIVITGERAKYGNILLKKGVT 139 A+ ++ +GE A+Y N++L+KGV Sbjct: 121 NAYCVIASGESAQYANLILQKGVV 144 >UniRef50_B7GNN9 RbsD or FucU transport n=7 Tax=Bacteria RepID=B7GNN9_BIFLI Length = 145 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 68/144 (47%), Positives = 95/144 (65%), Gaps = 5/144 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ--VIRADGLLVSDLLQAII 58 MLK I P+I P+LLK+L+EMGHGD I+ +DAHFPA S+G + VIR DG + LL A++ Sbjct: 1 MLKGIPPIIQPDLLKILSEMGHGDAIVLADAHFPAESVGVRSHVIRYDGQPIEPLLDAVL 60 Query: 59 PLFELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALSLQAPCPD--IIRINRFAFYERAQ 115 L LD Y P+++M V GDT+D + RYR + P I + RFAFYE A Sbjct: 61 QLIPLDQYTEHPVLLMDKVPGDTVDTPIWDRYRQVIDRHEPGKQAGIGMLERFAFYEEAG 120 Query: 116 KAFAIVITGERAKYGNILLKKGVT 139 +++ IV TGE+++Y NI+++KGV Sbjct: 121 RSYCIVATGEQSQYANIIIRKGVI 144 >UniRef50_B5ZNU4 RbsD or FucU transport n=10 Tax=Alphaproteobacteria RepID=B5ZNU4_RHILW Length = 149 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 65/140 (46%), Positives = 88/140 (62%), Gaps = 1/140 (0%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK I PL+ P+LL L MGHGD+I+ +DA+FP+ SMGP VIRADG+ +D+ +AI+ Sbjct: 1 MLKGIHPLLGPDLLHALKTMGHGDDIVIADANFPSGSMGPPVIRADGVSATDMAEAILAH 60 Query: 61 FELDSYAPPLVMMAAVEGDT-LDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFA 119 LD++ P V GD PEV ++ +S +A I+ + RFAFY A+KA Sbjct: 61 MPLDTFVPETAWRMEVVGDPQAVPEVCAEFQKIVSRRAGDFAIVPVERFAFYAMARKAAY 120 Query: 120 IVITGERAKYGNILLKKGVT 139 IV T E YGN++LKKGV Sbjct: 121 IVATTEFRLYGNLILKKGVV 140 >UniRef50_A7VPL4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPL4_9CLOT Length = 143 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 70/142 (49%), Positives = 88/142 (61%), Gaps = 3/142 (2%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSM-GPQVIRADGLLVSDLLQAIIP 59 MLK ISPLISPELLK+LAEMGHGD I F DA+FPA S V+RADG+ + LL A++ Sbjct: 1 MLKKISPLISPELLKILAEMGHGDVIAFGDANFPAESSKASYVVRADGIPIPALLDAVLE 60 Query: 60 LFELDSYA-PPLVMMAAVEGDTLDPEVERRYRNALSLQ-APCPDIIRINRFAFYERAQKA 117 LF +D++ P+ +M V GD PEV Y+ L+ I + RF FY A Sbjct: 61 LFPIDTFVTQPVKLMQVVPGDDYVPEVVEEYKKILAKHDVDEDKIEYLERFDFYGHTDTA 120 Query: 118 FAIVITGERAKYGNILLKKGVT 139 + +V TGE A+Y NI LKKGV Sbjct: 121 YCVVATGETARYANITLKKGVI 142 >UniRef50_C1BNJ8 FucU homolog n=2 Tax=Caligus rogercresseyi RepID=C1BNJ8_9MAXI Length = 152 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 62/146 (42%), Positives = 91/146 (62%), Gaps = 8/146 (5%) Query: 2 LKTISPLISPELLKVLAEMGHGDEIIFSDAHFP---AHSMGPQVIRADGLLVSDLLQAII 58 L+ I +ISP+LL LA+MGHGDEI+ +D++FP G +++ A G + DLLQAI+ Sbjct: 4 LRGIPSIISPDLLYTLAQMGHGDEIVLADSNFPSFSVSKCGAKLVDASGHSIPDLLQAIL 63 Query: 59 PLFELDSYA-PPLVMMAAVEGD---TLDPEVERRYRNALSL-QAPCPDIIRINRFAFYER 113 PLF LD Y P ++M V D L ++ Y L+ + ++ + RF FYER Sbjct: 64 PLFPLDHYVFNPAIVMELVNADKKKNLKIDIWSTYEKILADSEGRDIPMLEVERFEFYER 123 Query: 114 AQKAFAIVITGERAKYGNILLKKGVT 139 A++++A+V TGE + YGNI+LKKGV Sbjct: 124 AKRSYAVVSTGETSIYGNIILKKGVI 149 >UniRef50_C2KRR0 Ribose ABC superfamily ATP binding cassette transporter, membrane protein n=2 Tax=Mobiluncus mulieris RepID=C2KRR0_9ACTO Length = 141 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 65/140 (46%), Positives = 88/140 (62%), Gaps = 2/140 (1%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 ML I ++SPEL+KV+ EMGHGDEI F DA++P + +VIRADGLL+ D+L ++ L Sbjct: 1 MLYKIPHILSPELVKVMMEMGHGDEITFGDANYPQNGSTQKVIRADGLLIPDILAGVLEL 60 Query: 61 FELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFA 119 LD Y +M VEGD+ P+V Y + AP + RF FYE+A+K+ Sbjct: 61 LPLDFYNDWQYALMNTVEGDS-RPDVWDTYDKIVKNAAPQATLKLFERFDFYEQARKSQV 119 Query: 120 IVITGERAKYGNILLKKGVT 139 V+TGE A YGNI+L+KGV Sbjct: 120 TVLTGETALYGNIILRKGVV 139 >UniRef50_B8F6Y2 L-fucose mutarotase n=150 Tax=Bacteria RepID=FUCM_HAEPS Length = 146 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 90/142 (63%), Positives = 108/142 (76%), Gaps = 2/142 (1%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK I P +SPELLKVLAEMGHGDEI+ SDAHFPAH + +VIRADG+ ++ LL+AI PL Sbjct: 1 MLKGIHPALSPELLKVLAEMGHGDEIVLSDAHFPAHQLHHKVIRADGIQIATLLEAITPL 60 Query: 61 FELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALSL-QAPCPDIIRINRFAFYERAQKAF 118 FE D Y PL MM AV GD+LD VE RY A++ P + R+ RFAFY+RA+ A+ Sbjct: 61 FEYDQYVERPLAMMQAVHGDSLDLAVEERYLAAIAKINGKAPLVERVERFAFYDRAKIAY 120 Query: 119 AIVITGERAKYGNILLKKGVTP 140 A+VITGE AKYGNI+LKKGVTP Sbjct: 121 AVVITGELAKYGNIILKKGVTP 142 >UniRef50_A0B319 RbsD or FucU transport n=85 Tax=Proteobacteria RepID=A0B319_BURCH Length = 173 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 7/146 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGP-----QVIRADGLLVSDLLQ 55 MLK + PL+ ++L L MGHGDEI DA+FPA S+ + +R DG + +++ Sbjct: 23 MLKNLDPLLHADILHTLRAMGHGDEIAICDANFPAESVAEHTVVGRALRVDGADSARVVR 82 Query: 56 AIIPLFELDSYAPPLVMMAAVEGDTLD-PEVERRYRNALSL-QAPCPDIIRINRFAFYER 113 A++ + LD++ V GD P V+R + + + + + RFAFYER Sbjct: 83 AVLSVLPLDTFVDTPAWRMEVVGDAAAVPPVQREVQAEIDRAEGRAVPLTGVERFAFYER 142 Query: 114 AQKAFAIVITGERAKYGNILLKKGVT 139 AQ+A+A+++TGE YG + KKGV Sbjct: 143 AQQAYAVIVTGETRGYGCFIFKKGVL 168 >UniRef50_B0NEL3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEL3_EUBSP Length = 153 Score = 155 bits (392), Expect = 4e-37, Method: Composition-based stats. Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 3/142 (2%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 ML+ I ++ P+L+K + EMGH D ++ +DA FP + ++IR D + +LL+AI+P Sbjct: 11 MLRNIPKILPPDLVKYMMEMGHADYLVIADAGFPGTAHSKRMIRMDSAEIPELLEAILPF 70 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALS---LQAPCPDIIRINRFAFYERAQKA 117 F LD + V + + + + Y L ++R FY+ A+ A Sbjct: 71 FPLDYFVDYPVRLMQKLDYEPEVMIWKTYEELLKKYDKDHAFKQFKYLDRLDFYKEAEDA 130 Query: 118 FAIVITGERAKYGNILLKKGVT 139 + ++ TG+ ++YGNI+L+KGV Sbjct: 131 YVVIQTGDTSRYGNIILQKGVC 152 >UniRef50_Q12BF4 RbsD or FucU transport n=6 Tax=Proteobacteria RepID=Q12BF4_POLSJ Length = 148 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 56/144 (38%), Positives = 82/144 (56%), Gaps = 6/144 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMG----PQVIRADGLLVSDLLQA 56 MLK I PL++P+ L LA MGHGD++ DA+FPA + ++++ G +L A Sbjct: 1 MLKNIPPLLTPDALHALASMGHGDDVAIVDANFPAARVAQQSGARLVQLAGTSAPQVLNA 60 Query: 57 IIPLFELDSYAPPLVMMAAVEGD-TLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQ 115 ++ L LD + P V G+ T P + +AL+ P + + RF FYERAQ Sbjct: 61 VLQLLPLDDFVPDAAWTMQVVGNATAIPAPVAEFASALAQAGERPAV-SLERFDFYERAQ 119 Query: 116 KAFAIVITGERAKYGNILLKKGVT 139 A+ I+ TGE+ KYGNI+L+KGV Sbjct: 120 SAYLILQTGEQRKYGNIVLRKGVI 143 >UniRef50_A8RJ38 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJ38_9CLOT Length = 147 Score = 151 bits (381), Expect = 8e-36, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 8/147 (5%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ----VIRADGLLVSDLLQA 56 ML + ISPELLKVL EMGHGD ++ DA+FPA S+ + IR DG +D+L A Sbjct: 1 MLSGVPASISPELLKVLHEMGHGDTLVIGDANFPAASIAAEKNHINIRCDGHRATDMLDA 60 Query: 57 IIPLFELDSYAP-PLVMMAAVE-GDTLDPEVERRYRNALSLQA--PCPDIIRINRFAFYE 112 I+ L LD + P+ +M +E L V + + ++ + ++RFAFY+ Sbjct: 61 ILQLMPLDGFVEKPVTIMDKMEMHRDLKCPVWDEFTDIVAKHDERGADAVGFLDRFAFYD 120 Query: 113 RAQKAFAIVITGERAKYGNILLKKGVT 139 A+ A+A+V T E A Y I+++KG Sbjct: 121 AAKDAYAVVSTSETAFYACIMIQKGCL 147 >UniRef50_C4LFS0 RbsD or FucU transport n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFS0_TOLAT Length = 148 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 50/146 (34%), Positives = 69/146 (47%), Gaps = 7/146 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMG-----PQVIRADGLLVSDLLQ 55 MLK I P + ELL +LA MGHGDE+ D +FPA S+ +++ G+ + Sbjct: 1 MLKNIPPFMDAELLWILAAMGHGDELAVVDRNFPARSIANETTSGKLVSLGGMDAPTCIS 60 Query: 56 AIIPLFELDSYAP-PLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIR-INRFAFYER 113 I+ L LD++ P P+ M V+ V A I RF +Y Sbjct: 61 GILELMPLDNFVPTPVGWMDPVDQPGTILSVHHDVLAACKKAENAEVGHYVIERFDYYAA 120 Query: 114 AQKAFAIVITGERAKYGNILLKKGVT 139 A+K FA+V T E YG +LKKGV Sbjct: 121 AKKCFAVVQTSENRPYGCFILKKGVV 146 >UniRef50_Q2K1E4 Fucose dissimilation pathway protein n=5 Tax=Rhizobium RepID=Q2K1E4_RHIEC Length = 153 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 7/147 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMG-----PQVIRADGLLVSDLLQ 55 MLK I ++ ++L+ L MGHGD ++ SD +FP+ S+ +++ + + + Sbjct: 1 MLKGIRAELNGDILQALCNMGHGDYLVISDMNFPSDSIARQTRLGRLLTMENIPAPQAID 60 Query: 56 AIIPLFELDSYAPPLVMMAAVEGDTLD-PEVERRYRNALSLQAPCP-DIIRINRFAFYER 113 A++ + LD+ P V V G + P +++ + + P + + R AFY+ Sbjct: 61 AVLSVLPLDTPIQPSVGRMEVIGKPDEIPPIQQEVQAIVDRAEGKPSPMYPVERMAFYDI 120 Query: 114 AQKAFAIVITGERAKYGNILLKKGVTP 140 A+KA+ ++ TGE YG LL KGV P Sbjct: 121 AKKAYCVIATGELRFYGCFLLTKGVIP 147 >UniRef50_B9K570 Putative uncharacterized protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K570_AGRVS Length = 146 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 7/146 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGP-----QVIRADGLLVSDLLQ 55 MLK I P+++ ELL L MGHGD+++ D + PA ++ ++I G + Sbjct: 1 MLKGIDPVLNAELLHALMLMGHGDQLVLCDINHPAETIAKHTTYGKLINLSGCGLEVATA 60 Query: 56 AIIPLFELDSYAPPLVMMAAVEGDT--LDPEVERRYRNALSLQAPCPDIIRINRFAFYER 113 AI+ LF LD++ V V GD P R + + I + RFAFY Sbjct: 61 AILTLFPLDTFVEAPVKRMQVVGDPGGQVPIFSAIQRVVDNAEGRPVKIDALERFAFYAE 120 Query: 114 AQKAFAIVITGERAKYGNILLKKGVT 139 A+ +FAIV T + YG + KGV Sbjct: 121 AKASFAIVRTSDPGPYGCFIFSKGVV 146 >UniRef50_A5F1C1 D-ribose pyranase n=292 Tax=Bacteria RepID=RBSD_VIBC3 Length = 139 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 5/141 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M K S L++ EL ++A +GH DEI DA P ++ A V L+ + + Sbjct: 1 MKK--STLLNSELSYLVATLGHTDEITICDAGLPIPDEVTRIDLALTHGVPSFLETV-RV 57 Query: 61 FELDSYAPPLVMMAA--VEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAF 118 +S +++ L + R + L I I+ AF +R ++ Sbjct: 58 ILSESQIESVIVAQEFAQVSPVLHEALYRELKAEEQLCGKPIAIQYISHEAFKQRTLQSR 117 Query: 119 AIVITGERAKYGNILLKKGVT 139 A+V TGE Y N++ + GV Sbjct: 118 AVVRTGECTPYANVIFQAGVV 138 >UniRef50_B1Y3G2 RbsD or FucU transport n=8 Tax=Proteobacteria RepID=B1Y3G2_LEPCP Length = 156 Score = 141 bits (356), Expect = 6e-33, Method: Composition-based stats. Identities = 62/151 (41%), Positives = 83/151 (54%), Gaps = 13/151 (8%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMG-------PQVIRADGLLVSDL 53 MLK I PL++P+LLKVLAEMGHGDEI+ +DA+F A S+ V+ G + Sbjct: 1 MLKGIDPLLTPDLLKVLAEMGHGDEIVIADANFTAASLAIGANGVRKPVLHVSGAGIGRT 60 Query: 54 LQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSL-----QAPCPDIIRINRF 108 ++A+I L LD+ V V DT R R+ +++ A I RF Sbjct: 61 VEAVIKLLPLDAAVEQPVAYMQV-SDTPAGYRSRLQRDVIAMLADGGHARPEQCQAIERF 119 Query: 109 AFYERAQKAFAIVITGERAKYGNILLKKGVT 139 AFY+R AFAIV+TG+ YGN +LKKGV Sbjct: 120 AFYDRVSGAFAIVLTGDLQPYGNFILKKGVI 150 >UniRef50_A7GLA2 D-ribose pyranase n=3 Tax=Bacteria RepID=RBSD_BACCN Length = 131 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 9/139 (6%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M K +++ E+ +LA +GH D I+ +D P ++ A L L ++ + Sbjct: 1 MKK--HGVLNSEIAAILAALGHTDTIVIADCGLPIPDSVKRIDLAVELGKPSFLD-VLQV 57 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 D + + + + R + + + + F E+ ++A AI Sbjct: 58 VIEDMAIEKVTVAEEITTNN------REIYKEIETRLKEANFEYVLHEEFKEKTKQAKAI 111 Query: 121 VITGERAKYGNILLKKGVT 139 + TGE Y NI+L GV Sbjct: 112 IRTGEATPYANIILHAGVI 130 >UniRef50_A4IT64 D-ribose pyranase n=9 Tax=Firmicutes RepID=RBSD_GEOTN Length = 132 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 9/138 (6%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M K +++ EL +LA +GH D I+ +D P + ++ A L Sbjct: 1 MKKN--GILNKELNTLLASLGHTDTIVIADCGLPIPNEEARIDLALVKGFPPFLS----- 53 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 LD+ LV+ V + + + Y + + + I + F E ++A A+ Sbjct: 54 -VLDAVINELVVEEIVLAEEIKTQNPDVYESIKARMSD-VPIQFVRHEEFKEMTKQAKAV 111 Query: 121 VITGERAKYGNILLKKGV 138 + TGE Y NI+L+ GV Sbjct: 112 IRTGEATPYANIILRSGV 129 >UniRef50_Q65E56 D-ribose pyranase n=11 Tax=Bacillales RepID=RBSD_BACLD Length = 131 Score = 137 bits (347), Expect = 8e-32, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 9/139 (6%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M K +++ + K+LA++GH D I+ +DA P P++ A L + + L Sbjct: 1 MKK--HGILNSHIAKLLADLGHTDTIVIADAGLPVPPGVPKIDLALTLGTP-GFREVTKL 57 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 + + +E V L + I I AF + +A A+ Sbjct: 58 IADEMVVEKVTAAQEIES------VNPGQAAFLKAEFSNQKIDYIPHEAFKKATSQAKAV 111 Query: 121 VITGERAKYGNILLKKGVT 139 + TGE Y N +L GV Sbjct: 112 IRTGEATPYANCILHAGVI 130 >UniRef50_A0NM05 Fucose dissimilation pathway protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NM05_9RHOB Length = 124 Score = 137 bits (347), Expect = 8e-32, Method: Composition-based stats. Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 2/122 (1%) Query: 20 MGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGD 79 MGHGDEI DA+FPA S GP +R DG+ +D L+AI+ + LD++ P V GD Sbjct: 1 MGHGDEIAIVDANFPAESSGPDCVRLDGISATDTLKAILSVMPLDTFVPAPARTMQVVGD 60 Query: 80 T-LDPEVERRYRNALSLQAPCP-DIIRINRFAFYERAQKAFAIVITGERAKYGNILLKKG 137 PE+ ++ + A P I + R AFYE A AFA+V TGE YGNI+L KG Sbjct: 61 PDAVPEIVAEFQTIIDGTADKPAQIETLERHAFYEAASSAFAVVQTGETRLYGNIILTKG 120 Query: 138 VT 139 + Sbjct: 121 II 122 >UniRef50_B5YY06 D-ribose pyranase n=72 Tax=Bacteria RepID=RBSD_ECO5E Length = 139 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 61/143 (42%), Gaps = 9/143 (6%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M K +++ ++ V++ +GH D ++ DA P ++ A V +Q ++ + Sbjct: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGV 57 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSL----QAPCPDIIRINRFAFYERAQK 116 + ++ ++ +P++ L Q +I F ++ + Sbjct: 58 VTNEMQVEAAIIAEEIKH--HNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAE 115 Query: 117 AFAIVITGERAKYGNILLKKGVT 139 + A++ +GE + Y NI+L GVT Sbjct: 116 SQAVIRSGECSPYANIILCAGVT 138 >UniRef50_A0Q217 D-ribose pyranase n=80 Tax=Firmicutes RepID=RBSD_CLONN Length = 131 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 9/139 (6%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M KT PL++ + +V+++MGH D I D+ P ++ A V +Q + Sbjct: 1 MKKT--PLLNSSICEVVSKMGHTDMIAIGDSGLPIPDDTKRIDLALIKGVPTFMQT-LKA 57 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 L+ +++ + EV + + I I+ + A+ Sbjct: 58 VLLEQQVEEVIIAHETK------EVSPETFENIKKEIGDVKITFISHEELKKELSNCKAV 111 Query: 121 VITGERAKYGNILLKKGVT 139 + TGE+ Y NI+LK GV Sbjct: 112 IRTGEQTPYANIILKSGVV 130 >UniRef50_Q8R2K1-3 Isoform 3 of Protein fucU homolog n=1 Tax=Mus musculus RepID=Q8R2K1-3 Length = 169 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 57/128 (44%), Positives = 78/128 (60%), Gaps = 8/128 (6%) Query: 18 AEMGH-GDEIIFSDAHFPAHSM---GPQVIRADGLLVSDLLQAIIPLFELDSYAP-PLVM 72 + H GDEI+ +DA+FP S+ GP IRADGL + LL+A++ L LD+Y P + Sbjct: 35 CRIRHEGDEIVLADANFPTSSICQCGPVEIRADGLDIPQLLEAVLRLLPLDTYVESPAAV 94 Query: 73 MAAVEGD---TLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGERAKY 129 M V D L + +RY + L ++++ RF FYERA+KAFA+V TGE A Y Sbjct: 95 MDLVPSDKEKGLQTPIWKRYESLLLEADCKKTLMKLERFEFYERAKKAFAVVATGEMALY 154 Query: 130 GNILLKKG 137 GNI+LKKG Sbjct: 155 GNIILKKG 162 >UniRef50_C6AR62 RbsD or FucU transport n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=C6AR62_RHILS Length = 147 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 7/145 (4%) Query: 2 LKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAH-----SMGPQVIRADGLLVSDLLQA 56 LK I ++ P+LL +L+ MGHGDE+ D +F A ++ +++ + +D + A Sbjct: 3 LKNIPGILCPDLLWILSAMGHGDELAIVDKNFSACRVSKKTVTGKLVSMNAASATDAIAA 62 Query: 57 IIPLFELDSYAPPLVMMAAVEGD-TLDPEVERRYRNALSLQAPC-PDIIRINRFAFYERA 114 I+ + LD + +M V S I RFA+Y A Sbjct: 63 ILAVMPLDHFVEQPLMHMEDPDQAGTMLPVHADVELLCSTVEMRSIKSRSIERFAYYPLA 122 Query: 115 QKAFAIVITGERAKYGNILLKKGVT 139 + FA+V TGE YGN +LKKGV Sbjct: 123 ESCFAVVHTGETRPYGNFILKKGVV 147 >UniRef50_C5C446 RbsD or FucU transport n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C446_BEUC1 Length = 136 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 8/137 (5%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 ML I PL++ LL L MGH D ++ +DAHFPA + +++ G +++A+ + Sbjct: 1 MLSGIHPLLTGSLLAALDAMGHSDAVVVADAHFPAARLAARLVELPGTTAPQVVEALCTV 60 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 LD V+M A E ++ L A P+ I+RFAFY+ A +AF + Sbjct: 61 LPLDDGPDAAVLMDAPERQP--------VQDELVTAAGAPESSGIDRFAFYDAAAQAFLV 112 Query: 121 VITGERAKYGNILLKKG 137 V TGE YGN+LL+KG Sbjct: 113 VRTGETRAYGNLLLRKG 129 >UniRef50_UPI00019065E7 fucose dissimilation pathway protein n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019065E7 Length = 157 Score = 131 bits (330), Expect = 8e-30, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 7/145 (4%) Query: 3 KTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ-----VIRADGLLVSDLLQAI 57 + P + K A GHGD ++ SD +FP+ S+ Q ++ + + + AI Sbjct: 7 REFGPNSTATFFKHFAIWGHGDYLVISDMNFPSDSIARQTRLGTLLTMENISAPQAIDAI 66 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLD-PEVERRYRNALSLQAPCP-DIIRINRFAFYERAQ 115 + + LD+ P V V G + P +++ + + P + + R AFYE A+ Sbjct: 67 LSVLPLDTPIQPSVGRMEVIGKPDEIPPIQQEVQAIVDRAEGKPSPMYPVERMAFYEIAK 126 Query: 116 KAFAIVITGERAKYGNILLKKGVTP 140 KA+ ++ TGE YG LL KGV P Sbjct: 127 KAYCVIATGELRFYGCFLLTKGVIP 151 >UniRef50_Q89HT9 Bll5900 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HT9_BRAJA Length = 147 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 7/146 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGP-----QVIRADGLLVSDLLQ 55 MLK+I P+++P+LL +LA MGHGD+++F DA+ PA + ++I+ G+ + + Sbjct: 1 MLKSIDPILTPDLLWLLASMGHGDDLVFVDANHPATRIAKTTSSQRLIQLPGMRMETAAR 60 Query: 56 AIIPLFELDSY-APPLVMMAAVEGDTLDPEVERRYRNALSL-QAPCPDIIRINRFAFYER 113 AI+ ++ LD + P+ +M V+ P+V+R + ++ R FY Sbjct: 61 AIMSVYPLDDFDPDPVRVMMPVDDPDRVPDVQRAVLAEIERAAGRTVAPGKLARPDFYRA 120 Query: 114 AQKAFAIVITGERAKYGNILLKKGVT 139 A F +V G+ YG L++KGV Sbjct: 121 AAAGFGVVQVGDSRGYGCFLIRKGVI 146 >UniRef50_C6AZA9 RbsD or FucU transport n=18 Tax=Alphaproteobacteria RepID=C6AZA9_RHILS Length = 158 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 1/140 (0%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK + PL+SPELL L MGHGDEI D ++P ++IR DG + +L A++ + Sbjct: 1 MLKGLDPLLSPELLLTLRAMGHGDEIAIVDGNYPGVEHARRLIRLDGHHLIPVLNAVLSV 60 Query: 61 FELDSYAPPLVMMAAVEGDTLDP-EVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFA 119 +D + + + V+ + V + + P ++ + FY R + A A Sbjct: 61 LPIDDFVAEAIFRSTVKAERDKLDPVHEEMIDCCARHEPHRQVVPLIGQDFYGRVKTAHA 120 Query: 120 IVITGERAKYGNILLKKGVT 139 ++ TGE Y NI+L+KGV Sbjct: 121 LIQTGEPRLYANIILRKGVI 140 >UniRef50_C5EN53 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN53_9FIRM Length = 147 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 77/147 (52%), Gaps = 8/147 (5%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFP--AHSMGPQVIRADGLLVSDLLQAII 58 MLK I IS +LLK LA+MGHGD +I +D +P + G I+A G +D+++ I+ Sbjct: 1 MLKGIPTRISSDLLKALADMGHGDLLIIADDFYPPITKTPGGVSIQAKGNSAADMIEDIL 60 Query: 59 PLFELD----SYAPPLVMMAAVEGDTLD-PEVERRYRNALSLQAPCPDI-IRINRFAFYE 112 L LD Y ++ G ++D P+V +A+ P I I R FYE Sbjct: 61 KLMPLDVDYCEYPVEYMIPDKDSGISMDRPKVWDDAIDAVVKNGYAPKIVGEIERSKFYE 120 Query: 113 RAQKAFAIVITGERAKYGNILLKKGVT 139 +A +A+ V T ER YG +L+KGV Sbjct: 121 KAGRAYVTVCTSERQPYGCFILQKGVM 147 >UniRef50_B3T6P2 Putative RbsD / FucU transport protein family protein n=1 Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6P2_9ZZZZ Length = 135 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 8/128 (6%) Query: 20 MGHGDEIIFSDAHFP-----AHSMGPQVIRADGLLVSDLLQAIIPLFELDSYAPPLVMMA 74 MGHGDE++ +D +FP A ++ + I+ DGL + +L +AI+ +F LDS+ V Sbjct: 1 MGHGDELVLTDCNFPSDSVAAETVTGKFIQMDGLDIPELAKAILSVFPLDSFVSEPVFRM 60 Query: 75 AVEGDTLD-PEVERRYRNALSLQAPCP-DIIRINRFAFYERAQKAFAIV-ITGERAKYGN 131 V G + + RN L + +I I R AFYERA+ A+A+V GER YG Sbjct: 61 EVVGKPGELVGCHKDMRNILDETSDRRWEIGSIERHAFYERAKNAYAVVCAAGERRPYGC 120 Query: 132 ILLKKGVT 139 + KGV Sbjct: 121 FIFIKGVI 128 >UniRef50_B4U1H5 High affinity ribose transport protein RbsD n=3 Tax=Lactobacillales RepID=B4U1H5_STREM Length = 135 Score = 128 bits (323), Expect = 4e-29, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 53/139 (38%), Gaps = 8/139 (5%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M K +++ ++ K+ A++GH D + D P P++ A + Sbjct: 4 MKK--HGILNSDVAKLAADLGHTDRVCIGDLGLPVPVGVPKIDLALKRGLPSFQD----- 56 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 L Y +V+ + + + + L+ + ++ + A+ Sbjct: 57 -VLGMYLEHVVIEKVILAEEIKTANPDQLAAILTQLDDTVAVEYVSHEELKALNKSVKAV 115 Query: 121 VITGERAKYGNILLKKGVT 139 + TGE Y NI+L+ GVT Sbjct: 116 IRTGEDTPYSNIILQSGVT 134 >UniRef50_C9Y9X7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9X7_9BURK Length = 145 Score = 127 bits (321), Expect = 8e-29, Method: Composition-based stats. Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 5/144 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAH--SMGPQVIRADGLLVSDLLQAII 58 MLK + PL++PELL L+ MGHG+ + DA+F A G ++R G + + +A++ Sbjct: 1 MLKGLDPLLTPELLMHLSAMGHGEWVAVVDANFTADFLGKGKALVRLPGHSLERVSKAVL 60 Query: 59 PLFEL-DSYAPPLVMMAAVEGDT-LDPEVERRYRNALSLQA-PCPDIIRINRFAFYERAQ 115 +F L + A P M + + L P + + RFAFYE+ + Sbjct: 61 SVFPLAEDVACPAAYMQVCNSPEGHRTAAQSSVVDLLGRDGLPANRVEAVERFAFYEKIK 120 Query: 116 KAFAIVITGERAKYGNILLKKGVT 139 A IV +GE YGN + KGV Sbjct: 121 GASVIVQSGEATAYGNAMFCKGVI 144 >UniRef50_C3JZP4 D-ribose pyranase n=3 Tax=Proteobacteria RepID=RBSD_PSEFS Length = 134 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 6/139 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M KT PL++ L +V+A +GHGD ++ DA P + A + D + A + + Sbjct: 1 MKKT--PLLNIALSRVIASLGHGDILVIGDAGLPVPPGVELIDLALTQGIPDFISA-LRI 57 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 + V+ + P N LS +A + ++ AF + ++KA A+ Sbjct: 58 VLSEMQVESHVLAEEILLK--QPPALNEL-NTLSDEAALGERRLVSHEAFKQLSRKARAV 114 Query: 121 VITGERAKYGNILLKKGVT 139 V TGE Y NI L GVT Sbjct: 115 VRTGECQPYCNIALVSGVT 133 >UniRef50_A5INL8 D-ribose pyranase n=8 Tax=Thermotogaceae RepID=RBSD_THEP1 Length = 135 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 3/133 (2%) Query: 7 PLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSY 66 +++ + +++A MGH D + D FP +V LL+ + + + Sbjct: 5 GILNSTISEMVANMGHTDMLAIVDMGFPIPDGAKKVDLVVDKGKPGLLEVV-EVILKELE 63 Query: 67 APPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGER 126 +++ + + +PE N + I + F + ++ + V TG Sbjct: 64 VEKIILAEEM--NEKNPETRDLLINLVGKNNSNVKIEFVPHEEFKKISRTSKGFVRTGAD 121 Query: 127 AKYGNILLKKGVT 139 Y N++L GV Sbjct: 122 RPYSNVILVSGVI 134 >UniRef50_Q4KEW9 D-ribose pyranase n=18 Tax=Bacteria RepID=RBSD_PSEF5 Length = 134 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 6/139 (4%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M KT PL++ L +++A +GHGD ++ DA P + A V D L + + Sbjct: 1 MKKT--PLLNIALSRLIASLGHGDIVVIGDAGLPVPPGVELIDLALTHGVPDFL-TTLKV 57 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 + V+ + P ++ +N F +++A A+ Sbjct: 58 LLSEMQVERHVLAEEILLKQPTP---LAALEGMTAGGELGQRQLMNHEDFKVLSRQARAV 114 Query: 121 VITGERAKYGNILLKKGVT 139 + TGE Y NI L GVT Sbjct: 115 IRTGECQPYCNIALIAGVT 133 >UniRef50_Q8GBR6 Putative FucU homolog (Fragment) n=1 Tax=Treponema maltophilum RepID=Q8GBR6_TREMA Length = 128 Score = 124 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 83/121 (68%), Gaps = 2/121 (1%) Query: 22 HGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSYA-PPLVMMAAVEGDT 80 HGDE++ SDA +P S +V+RADG+ + LL I+ L +D Y PLVMM A +GDT Sbjct: 1 HGDELVLSDAFYPGDSCNARVLRADGIKIPALLDGILRLINIDPYVNDPLVMMNAAKGDT 60 Query: 81 LDPEVERRYRNALSLQAPC-PDIIRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVT 139 LDP VE Y A+ P P I RI+RFAFYER++ AFAIV++GE KYGNI++KKGV Sbjct: 61 LDPAVEASYFKAIKNIYPDAPAIARIDRFAFYERSKSAFAIVVSGETVKYGNIIIKKGVV 120 Query: 140 P 140 P Sbjct: 121 P 121 >UniRef50_A8F3M5 D-ribose pyranase n=1 Tax=Thermotoga lettingae TMO RepID=RBSD_THELT Length = 140 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 8/139 (5%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M K +++ EL ++A MGHGD + D+ FP V + +++ IIPL Sbjct: 1 MKKN--GILNRELSYLIASMGHGDILSIVDSGFPISEDVFCVDLSLIAGKPKIVEIIIPL 58 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 E + +++ ++ + P+ ++ + I I F +R +++ + Sbjct: 59 LE-ELEIEKVLIAEEIKM--ISPKYHQKLLSIFPKN---VQIEYIPHEKFKDRVRESKGV 112 Query: 121 VITGERAKYGNILLKKGVT 139 V TGE+ Y +++L GVT Sbjct: 113 VRTGEQTSYSSVILVGGVT 131 >UniRef50_Q02XM8 D-ribose pyranase n=23 Tax=Firmicutes RepID=RBSD_LACLS Length = 132 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 8/138 (5%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M K + +++ EL K+ ++GH D++ D P S ++ A + Sbjct: 1 MKKEV--ILNSELAKIADDLGHTDQVCIGDLGLPVPSGVKKIDLALTRGKPTFQE----- 53 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 LD Y +++ D + + + L+ + +++ ++ A+ Sbjct: 54 -VLDIYLENILVEKIYLADEIKENNPEQLKILLTKLSADVEVVFVSHETLKLMNHDVKAV 112 Query: 121 VITGERAKYGNILLKKGV 138 V TGE Y NI+L+ GV Sbjct: 113 VRTGENTPYSNIILQSGV 130 >UniRef50_Q1AUT6 D-ribose pyranase 2 n=5 Tax=Actinobacteria (class) RepID=RBSD2_RUBXD Length = 154 Score = 121 bits (304), Expect = 8e-27, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 10/139 (7%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M + S +++ L +LA GH D ++ DA FP +V A + D L+ ++ L Sbjct: 1 MKR--SGILNQPLSNILASFGHTDLLVVCDAGFPIPRDAQRVDLAIAPDLPD-LRTVLSL 57 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFA-FYERAQKAFA 119 + +V+ + L + R + A A A Sbjct: 58 INEEFITEKVVIAEEMAEFNPPLHGW------LQKHFSGVEFERRPHEEMLTQVATSAKA 111 Query: 120 IVITGERAKYGNILLKKGV 138 IV TG +GNI L GV Sbjct: 112 IVRTGAFDPWGNIGLVSGV 130 >UniRef50_A8S316 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8S316_9CLOT Length = 132 Score = 121 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 14/141 (9%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVI---RADGLLVSDLLQAI 57 MLKT ++ P+L +VLAE+ H D II DA P +V R D+L+ I Sbjct: 1 MLKT--GILHPQLARVLAELRHKDTIIIGDAGLPIPKGVERVDLGWRPGDPAYLDVLEEI 58 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA 117 + ++ A E T+ P+ ++ + L P + I ER++ A Sbjct: 59 LKYIVVEGAV------FADEALTVTPDFHKKALDLLPQGLP---VEYIPHTELKERSKDA 109 Query: 118 FAIVITGERAKYGNILLKKGV 138 AIV+TGE Y N++L G Sbjct: 110 KAIVLTGEFTGYTNVILSAGC 130 >UniRef50_A4J7I2 D-ribose pyranase n=5 Tax=Bacteria RepID=RBSD_DESRM Length = 130 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 58/138 (42%), Gaps = 10/138 (7%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M K ++ +L ++A +GH D I+ +D+ P + A + LL ++ + Sbjct: 1 MKK--QGVLHRDLAALIASLGHRDAIVVADSGLPVPPGVNCIDLAVTKGIPPLLP-VLQV 57 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 + +V+ +V + +++ + + ++ +Q+A A+ Sbjct: 58 ILYEMVVERVVIADE-------LQVNQSLVKSIADEVTPVSLEVVSHEQLKSLSQRARAV 110 Query: 121 VITGERAKYGNILLKKGV 138 + TGE Y N++L GV Sbjct: 111 IRTGEWTPYANVILYSGV 128 >UniRef50_C9KQ30 Ribose ABC transporter protein RbsD n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ30_9FIRM Length = 131 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 15/142 (10%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVS---DLLQAI 57 M K ++ EL + +A +GH D + DA P + A V +L A+ Sbjct: 1 MKK--HGVLHAELSRCIAALGHKDLFMIGDAGMPIPPGVEIIDLAVTAGVPTFRQVLDAV 58 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA 117 + E++ Y A E T + + L + + KA Sbjct: 59 LEEAEVEGY------YLADEIRTHNEPQHAYLQQKLK----GVPAEYMPHDELKTFSAKA 108 Query: 118 FAIVITGERAKYGNILLKKGVT 139 + TGE + Y N++L+ GV Sbjct: 109 KFAIRTGEFSPYPNVILRAGVV 130 >UniRef50_B1VU78 D-ribose pyranase 2 n=10 Tax=Actinobacteria (class) RepID=RBSD2_STRGG Length = 129 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 53/141 (37%), Gaps = 17/141 (12%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVI---RADGLLVSDLLQAI 57 M K S +++ L +AE+GHGD ++ DA P + RA +++L + Sbjct: 1 MKK--SGILNRHLAGAIAELGHGDTVLVCDAGMPIPPGPRVIDLAFRAGTPSFAEVLDGL 58 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA 117 + ++ + A +V P + + R A Sbjct: 59 LDELVVEGATAAEEIRDANPDAAALLDVH------------FPWLEAVPHDELKARTAAA 106 Query: 118 FAIVITGERAKYGNILLKKGV 138 +V TGE Y N+LL+ GV Sbjct: 107 RLVVRTGEARPYANVLLRCGV 127 >UniRef50_C8WRM8 RbsD or FucU transport n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRM8_ALIAD Length = 131 Score = 117 bits (295), Expect = 8e-26, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 10/138 (7%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M + S ++ L +++AE+GHG+ I +D P V A + L Sbjct: 1 MKR--SGILHGRLSQIIAELGHGELIAVADCGLPIPPGIELVDLAIKPGMPSFLD----- 53 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 D+ LV+ + + L + I F + + ++ Sbjct: 54 -VCDTILTELVVEDFIVANELAIRGSGVVDHLRERAGVLGK--FIPHSDFKQTLRNVRSV 110 Query: 121 VITGERAKYGNILLKKGV 138 V TGE Y N++ GV Sbjct: 111 VRTGEWTPYANVIFVAGV 128 >UniRef50_C5EWH0 High affinity ribose transport protein RbsD n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWH0_9FIRM Length = 136 Score = 117 bits (295), Expect = 8e-26, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 10/140 (7%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLK +I+ ++ ++A +GH D I +DA + S P++ A + +LL I+ Sbjct: 1 MLK--HGIINADIKYLMASLGHRDRIAITDAGYNVPSGIPKIDIAFLPGMPELLP-ILDG 57 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 + +V+ ++ + P++ YR + P I I F E + + Sbjct: 58 VLDEIAVEQVVLAEEIKS--MSPKLHEEYR----KRFPEKKICYIPHSEFDEVIKDVKGV 111 Query: 121 VITGERAKYG-NILLKKGVT 139 + TG+ + NI+L+ G T Sbjct: 112 IRTGQYGLHAPNIILQAGCT 131 >UniRef50_UPI0000F2AEE0 PREDICTED: similar to RIKEN cDNA 1810014F10 gene n=1 Tax=Monodelphis domestica RepID=UPI0000F2AEE0 Length = 172 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%) Query: 2 LKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSM---GPQVIRADGLLVSDLLQAII 58 LK I L+SPELL LA+MGHGDEI+ +DA+FP S+ GP IRADGL V LL++I+ Sbjct: 4 LKGIPSLLSPELLFALAKMGHGDEIVLADANFPTSSICRCGPVEIRADGLSVPQLLESIL 63 Query: 59 PLFELDSYAPPLV-MMAAVEGDTLD----PEVERRYRNALSLQAPCPDIIRINR 107 L LD+Y P V +M VE D PEV + +R+ LS + I R Sbjct: 64 KLLPLDTYEPNSVMVMDVVESDKAKGLQTPEVWQTFRSLLSQTGFRMALKEITR 117 >UniRef50_C8T2D3 Fucose operon FucU protein n=2 Tax=Enterobacteriaceae RepID=C8T2D3_KLEPR Length = 129 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 85/90 (94%), Positives = 87/90 (96%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGL VSDLLQAIIPL Sbjct: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLRVSDLLQAIIPL 60 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYR 90 FELDSYAPP+VMMAAVEGD LDP VE+RYR Sbjct: 61 FELDSYAPPVVMMAAVEGDALDPTVEQRYR 90 >UniRef50_Q6ABP6 D-ribose pyranase n=7 Tax=Actinobacteridae RepID=RBSD_PROAC Length = 127 Score = 114 bits (287), Expect = 6e-25, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 19/141 (13%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVS---DLLQAI 57 M K S L++P+L +A +GH + +DA P P + A L ++ AI Sbjct: 1 MKK--SGLLNPQLCAAVARLGHTQTFVVADAGLPIPHEVPVIDLAVVLGTPRFQEVFDAI 58 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA 117 + +D A E +PE R R ++ ++ + Sbjct: 59 LDEVVVDG------ATIAHEALGHEPESWVRERIE--------EVHTVSHEDLKKALPNV 104 Query: 118 FAIVITGERAKYGNILLKKGV 138 +V TGE Y N++++ GV Sbjct: 105 SFVVRTGETTPYSNVIVRCGV 125 >UniRef50_C5VEK7 High affinity ribose transport protein RbsD n=2 Tax=Corynebacterium matruchotii RepID=C5VEK7_9CORY Length = 125 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 21/141 (14%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVS---DLLQAI 57 M + L++P+L + +A +GH D D P + V + +AI Sbjct: 1 MKR--DGLLNPQLNQAIARLGHTDTFAICDCGLPLPPQARIIDLTLIHGVPSFEQVAEAI 58 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA 117 + ++ V T P+V ++ I +I+ F ++ Sbjct: 59 LKEVVIE----------KVTIATQTPDV------IINTLPADAPITKIDHEDFKKQINDC 102 Query: 118 FAIVITGERAKYGNILLKKGV 138 +V TG Y N + GV Sbjct: 103 TFVVRTGSTTPYANAIYYCGV 123 >UniRef50_D2BEN5 RbsD n=5 Tax=Actinomycetales RepID=D2BEN5_STRRD Length = 129 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 48/138 (34%), Gaps = 11/138 (7%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M + +++ L LA +GH DE++ D+ P V A + ++ Sbjct: 1 MKRA--GILNAALSGGLARLGHTDELLVCDSGMPLPPGVEVVDLAFLPGIPAFAD-VLDG 57 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI 120 + V + + L A P + I ++ + I Sbjct: 58 ILAELVVEGATAAREVRTANAECDA--------LLAARLPGLTYIPHSELKRLSRSSRLI 109 Query: 121 VITGERAKYGNILLKKGV 138 V TGE Y N+LL+ GV Sbjct: 110 VRTGEARPYANVLLRCGV 127 >UniRef50_B1JKB6 RbsD or FucU transport n=22 Tax=Yersinia RepID=B1JKB6_YERPY Length = 167 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 51/132 (38%), Gaps = 6/132 (4%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDS 65 ++ PEL LA +GH D I+ +DA FP ++ D+L I+ + + Sbjct: 4 DRILHPELAAALATLGHTDIILVTDAGFPIPPQAKRIDLGFWPGTVDVLD-ILRVLRKEI 62 Query: 66 YAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAF-YERAQKAFAIVITG 124 + + + V P++ R + + + + ++ A +A ++ +G Sbjct: 63 FVEEVRFASEV--RDCHPQLYRDVQTLYT--GSGAEFQAASHETLCHDLAYQAKVVIRSG 118 Query: 125 ERAKYGNILLKK 136 + N L Sbjct: 119 SFNPWANFALVA 130 >UniRef50_B4UZK2 FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=2 Tax=Streptomyces RepID=B4UZK2_9ACTO Length = 131 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 48/132 (36%), Gaps = 9/132 (6%) Query: 7 PLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSY 66 +I EL ++A + H D + SDA P P V S L I + + Sbjct: 5 GIIHRELAGLIAGLRHTDTFVISDAGLPLAPDTPVVDLGYRYGQSPFLDVIQTVLN-EIV 63 Query: 67 APPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGER 126 + + ++P V R+ D I+ F R + V TGE Sbjct: 64 VEHSWVTDKI--REVNPTVHTGLRSF------GLDPEPIDHDQFKARVRDVKFAVRTGED 115 Query: 127 AKYGNILLKKGV 138 Y N+LL+ GV Sbjct: 116 TFYANVLLRAGV 127 >UniRef50_C7ILP1 RbsD or FucU transport n=3 Tax=Clostridiales RepID=C7ILP1_9CLOT Length = 137 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 12/144 (8%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQA---I 57 MLKT I+P+L+ +LA GHGD+++ +D ++P S L ++ + + Sbjct: 1 MLKT--ACINPDLIGLLAACGHGDKVLIADGNYPLESKTANNTAKMYLGLTHGIPLATQV 58 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQK- 116 + + +M GD +PE+ ++ L + ++ R+ FY+ +K Sbjct: 59 LEVLGKTIAIEGAEVMVPESGD--EPEIFAEFQELLP---DGIKLSKLERYDFYDVCKKD 113 Query: 117 -AFAIVITGERAKYGNILLKKGVT 139 + TGE+ + NIL+ GV Sbjct: 114 NIKIAISTGEQRVFANILITVGVV 137 >UniRef50_D2R7C7 RbsD or FucU transport n=4 Tax=Bacteria RepID=D2R7C7_9PLAN Length = 148 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 11/147 (7%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ------VIRADGLLVSD-L 53 ML+ S LI PE+ +VLA GH +I+ +D H+PA S + GL+ D Sbjct: 1 MLR--STLIHPEISRVLAAAGHHAKILIADGHYPASSKKGPNATVVSMNLMPGLITCDQA 58 Query: 54 LQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYER 113 LQA++ +D DP V YR L+ ++ I+++ FY+ Sbjct: 59 LQAVLSAVPIDEINTMNYPKDDPYTLDSDPPVWNEYRQTLAKLGMNLELKPIDKWDFYDA 118 Query: 114 AQKAFAI--VITGERAKYGNILLKKGV 138 A + + T + ++ N+LL GV Sbjct: 119 VATADHVLTIQTADTQRFANLLLSIGV 145 >UniRef50_A5UTT7 RbsD or FucU transport n=5 Tax=Bacteria RepID=A5UTT7_ROSS1 Length = 139 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 9/143 (6%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 ML+ LI P++L L GHG +++ +D ++P + P + L ++ L + + Sbjct: 1 MLR--YKLIHPQILAALGGAGHGSQVLIADGNYPFATGAPASAQRVYLNLAPGLLTVTDV 58 Query: 61 F-ELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQ--KA 117 L P V +P + +R L P + + RFAFY+ A+ Sbjct: 59 LAALVDAIPVEAAHVMVPDAGPEPSIFTEFRALL----PYLSLQPLGRFAFYDAARSPDT 114 Query: 118 FAIVITGERAKYGNILLKKGVTP 140 ++ TGER Y NILL GV P Sbjct: 115 TLVIATGERRVYANILLTIGVVP 137 >UniRef50_A7BC25 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC25_9ACTO Length = 138 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 16/138 (11%) Query: 10 SPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ------VIRADG-LLVSDLLQAIIPLFE 62 P+ L+ LA GHG +I+ +DA++P + + A G L VS +L + Sbjct: 3 HPQFLRALAAAGHGSKILLADANYPHTTGVNPRCELISLNLAPGLLDVSQVLDVLKRTIP 62 Query: 63 LDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQK--AFAI 120 ++ +M A + D ++ + +R AL P + I+R+ FY+ A+ I Sbjct: 63 IE---RAEIMTPAPDADPVEIPIHDEFRAAL----PGVEFGEISRWDFYDAARDENVGII 115 Query: 121 VITGERAKYGNILLKKGV 138 V TGE+ YGN+LL GV Sbjct: 116 VATGEQRLYGNLLLTVGV 133 >UniRef50_Q15PP4 RbsD or FucU transport n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PP4_PSEA6 Length = 144 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 21/148 (14%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ-------VIRADGLLVSDL 53 MLKT +I P +L+ L GH +++ +D + P +M R L + Sbjct: 1 MLKT--AVIHPTILEALGRSGHFAQVVIADGNLPVAAMTGPNSTLVHLNFRPGMLDALSV 58 Query: 54 LQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYE- 112 L+ I+ + + ++M E+ Y+ L + R+AFY+ Sbjct: 59 LEGILEVCPIQG----AIVMEKPPEANA--EIHTAYQALL----GDVTWEAMERWAFYDK 108 Query: 113 -RAQKAFAIVITGERAKYGNILLKKGVT 139 RA I+ TGE+ ++ N++L GV Sbjct: 109 IRAPATTLIIQTGEQRRFANLILTVGVV 136 >UniRef50_A6WDZ4 RbsD or FucU transport n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WDZ4_KINRD Length = 144 Score = 101 bits (253), Expect = 7e-21, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 6/134 (4%) Query: 8 LISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLF-ELDSY 66 L+ P+LL LA GHGD ++ +D +FP + + L + L ++ + L Sbjct: 6 LLHPQLLAGLAAAGHGDRVVLADGNFPLRAGTNPSVPVVHLNLRPGLVTVLDVLEPLLGA 65 Query: 67 APPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYE--RAQKAFAIVITG 124 P D Y L +A + ++R+AFY RA +V T Sbjct: 66 VPVEAATVMASPDGAPVPAHDDYARLLGERA---ALSAVDRWAFYAQSRADDVALVVATA 122 Query: 125 ERAKYGNILLKKGV 138 ++ N++L GV Sbjct: 123 DQRLCANLILTVGV 136 >UniRef50_D1BIP0 ABC-type ribose transport system, auxiliary component n=3 Tax=Actinomycetales RepID=D1BIP0_SANKS Length = 127 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 19/141 (13%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGP---QVIRADGLLVSDLLQAI 57 M + S +++P L + LA +GHG ++ D P + A + +L A+ Sbjct: 1 MKR--SGVLNPALAEGLARLGHGHLVLVVDCGTPIPPGARVVDVSVVAGVPGFTQVLDAV 58 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA 117 + ++ E R + A Sbjct: 59 LDEIVVEGSVAAS------ESAGTVVAGWLEERGLSP--------ELVPHEDLKALLPGA 104 Query: 118 FAIVITGERAKYGNILLKKGV 138 ++ TGE + N+ L+ GV Sbjct: 105 ALVIRTGEATAWANVGLRCGV 125 >UniRef50_C0CRI2 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRI2_9FIRM Length = 136 Score = 99.5 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 20/147 (13%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAH--SMGPQVIRADGLLVS---DLLQ 55 MLK LI PEL+ LA GHG +I+ +D ++P S G ++ G V ++L Sbjct: 1 MLKG--KLIHPELIHQLALCGHGSKILIADGNYPLEEKSSGVKIFLGLGPGVPSVIEVLA 58 Query: 56 AIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQ 115 AI + E++ V D +PE+ +R L + R+ FY Sbjct: 59 AIHSVCEIE------KAQVMVPEDDREPEIFGEFRRELPDLELEELV----RYDFYAACM 108 Query: 116 KA---FAIVITGERAKYGNILLKKGVT 139 + V TGE+ + NILL G Sbjct: 109 EEGVLKLAVSTGEQRTFANILLTVGCV 135 >UniRef50_A3DCF4 RbsD or FucU transport n=4 Tax=Clostridiales RepID=A3DCF4_CLOTH Length = 151 Score = 97.9 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 49/132 (37%), Gaps = 7/132 (5%) Query: 6 SPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDS 65 + +++ ++ LA++GH D ++ +DA + + + + + ++ + Sbjct: 14 TGILNRDIAAELAKLGHTDRVLIADAGLAIPNTTKVIDVSLDVNFPTTVD-VLKVLLKHF 72 Query: 66 YAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYE-RAQKAFAIVITG 124 L++ A + P + Y + PC + + ++ + TG Sbjct: 73 SVEKLILSQATV--DVSPSRYKEYLSLFDESVPC---EIVEHSTLRDTLTKEVKFAIRTG 127 Query: 125 ERAKYGNILLKK 136 + NI+L Sbjct: 128 DFTANSNIILVS 139 >UniRef50_B1ZN30 RbsD or FucU transport n=2 Tax=Chlamydiae/Verrucomicrobia group RepID=B1ZN30_OPITP Length = 129 Score = 95.6 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 53/137 (38%), Gaps = 14/137 (10%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRA---DGLLVSDLLQAI 57 M++T +++P +L +LA + H + ++ +D FP V + D V +L AI Sbjct: 1 MIRT--GILNPAVLSLLARVRHTNTVVVADRGFPLWPQIETVDLSLVDDVPTVRQVLDAI 58 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA 117 +P Y + P V R+ ++ F R A Sbjct: 59 LP-----QYVIGRIFAEEEFRQVNSPSVVEALRD----HTGAIPLVFEPHVEFKRRVPHA 109 Query: 118 FAIVITGERAKYGNILL 134 ++ TG+ Y N++L Sbjct: 110 IGLIRTGDSTPYANLIL 126 >UniRef50_C9YX65 Fuscose operon fucU protein n=2 Tax=Streptomyces RepID=C9YX65_STRSW Length = 145 Score = 89.5 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 12/143 (8%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLL---QAI 57 ML ++ L+ P +L+ LA GHG ++ +D H+PA + + R L ++ L + Sbjct: 1 ML--LTDLLHPGILEALAGAGHGSRVLLADGHYPASTATGERARIVHLNLAPGLLDVTTV 58 Query: 58 IPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQ-- 115 + + +M +G+ P + YR+ L+ + + RF FY+ A+ Sbjct: 59 LDVLLRAIPIESAHVMVPPKGEPEPPAI-AEYRDRLA----PVPVETLGRFEFYDAARYS 113 Query: 116 KAFAIVITGERAKYGNILLKKGV 138 ++T + Y N+LL GV Sbjct: 114 DVALAIVTADTRTYANLLLTIGV 136 >UniRef50_Q54473 Regulation protein n=2 Tax=Enterobacteriaceae RepID=Q54473_SERMA Length = 138 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 20/145 (13%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQ------VIRADG-LLVSDL 53 M+K S + P LL LA+ GH +++ +D ++ + P+ + A G L + Sbjct: 1 MIK--SAITHPPLLAALAQCGHKTQVLIADGNYACVTHAPKDATVVYLNLAPGTLAAPPI 58 Query: 54 LQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYER 113 L+ ++ ++S + A D + +E YR L P I + R AFY Sbjct: 59 LEKLLACINVES-----AALMACPPDFTNT-IEAEYRQLLPEHCP---IEYLPREAFYAA 109 Query: 114 AQKAF--AIVITGERAKYGNILLKK 136 + ++ +GER ++ N+LL Sbjct: 110 VKSDRTLLVIASGERRRFANLLLTV 134 >UniRef50_Q1R0M9 RbsD or FucU transport n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1R0M9_CHRSD Length = 144 Score = 87.1 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 7/121 (5%) Query: 25 EIIFSDAHFPAHSMGPQVIRADGLLVSDLL---QAIIPLFELDSYAPPLVMMAAVEGDTL 81 +I+ +DA +P + P L + + + QA++ + MA EG Sbjct: 23 KILVADALYPHSTGAPATASRVYLNLCEGMVPAQAVMDAVSQSVAVEAITFMATAEGKAS 82 Query: 82 DPEVERRYRNALSLQAPCPDII--RINRFAFYE--RAQKAFAIVITGERAKYGNILLKKG 137 + V+ + R A I + R+AFY+ RA ++ TGER Y N LL G Sbjct: 83 ETVVDCQQRLAGHRHGNGQTIAWSGLERWAFYDACRAPDVCLLIATGERRPYSNFLLTIG 142 Query: 138 V 138 V Sbjct: 143 V 143 >UniRef50_A7WXT5 D-ribose pyranase n=77 Tax=Bacilli RepID=RBSD_STAA1 Length = 134 Score = 85.2 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 10/141 (7%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL 60 M K S +++ + K +A +GH D + +DA P + ++ A + + Sbjct: 1 MKK--SAVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVTKNLPRFID----- 53 Query: 61 FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKA--F 118 L + + + + + + + L + +II I Sbjct: 54 -VLATVLEEMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPHEEMKSNLAHPLNK 112 Query: 119 AIVITGERAKYGNILLKKGVT 139 + TGE Y NI L+ VT Sbjct: 113 GNIRTGETTPYSNIALESNVT 133 >UniRef50_B9E9Z6 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9Z6_MACCJ Length = 208 Score = 68.7 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQ 55 M KT ++ E+ KVL+++GH D I+ D P ++ A + + Sbjct: 1 MYKT--GTLNSEISKVLSDLGHTDTIVIGDCGLPVPKGVQKIDLAVRQGLPSFID 53 >UniRef50_UPI0001903CC7 fucose dissimilation pathway protein n=2 Tax=cellular organisms RepID=UPI0001903CC7 Length = 79 Score = 67.9 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 75 AVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGERAKYGNILL 134 E D LDP V + + P ++ + FY R + A A++ T E Y NI++ Sbjct: 1 KAERDKLDP-VHEEMIDCCARHEPHRQVVPLVGQDFYGRVRAAHALIQTSEPRLYANIIM 59 Query: 135 KKGVT 139 +KGV Sbjct: 60 RKGVI 64 >UniRef50_C3RHV1 Predicted protein n=2 Tax=Bacteria RepID=C3RHV1_9MOLU Length = 156 Score = 67.5 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 18/140 (12%) Query: 8 LISPELLKVLAEMGHGDEIIFSDAH--------FPAHSMGPQVIRADGLLVSDLLQAIIP 59 ++ L V+A + HG+ + +DA +P S + + Sbjct: 7 ILHERLAAVVASLRHGEMLFIADAGSGTSSKALYPLDSSVEYIDVEVVTGSPSFEDIVTT 66 Query: 60 LFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCP--DIIRINRFAFYERAQKA 117 L + +V +E D ++ Y+ + L + I +YE + Sbjct: 67 LVACGDFEGAIVTEDMIEVD------QKDYQLLVDLLGKKNIHSMHYIP--EYYEMRDRC 118 Query: 118 FAIVITGERAKYGNILLKKG 137 A+V TG+ + +L G Sbjct: 119 KAVVQTGDYGVHAQAILIAG 138 >UniRef50_C9Z5Q7 Putative carbohydrate transport protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z5Q7_STRSW Length = 77 Score = 56.3 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 28/111 (25%), Gaps = 38/111 (34%) Query: 28 FSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVER 87 DA P V A V + + F Sbjct: 3 VCDAGMPVPDGPRLVGLAFRAGVPSFAEVLEDRFP------------------------- 37 Query: 88 RYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGERAKYGNILLKKGV 138 D+ + E A A IV TGE Y N+LL+ GV Sbjct: 38 -------------DLEPVTHETLKEPAAGARLIVWTGEARPYANVLLRCGV 75 >UniRef50_Q98PW9 HIGH AFFINITY RIBOSE TRANSPORT PROTEIN RBSD n=1 Tax=Mycoplasma pulmonis RepID=Q98PW9_MYCPU Length = 133 Score = 48.6 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 10/132 (7%) Query: 8 LISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSYA 67 +I+ L + L+ + +I+ D +FP + + V L L Sbjct: 8 IINTTLNETLSRIQTNQKIVVCDPYFPIPVGANILDLSLIANVPSF----KQLMFL--II 61 Query: 68 PPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI--VITGE 125 L + A V + + +S + P F + + + V GE Sbjct: 62 ENLHIKALVLSNEIKEHNYDYLAYLISSKLPISLSNNFE--EFKYLSSQNDVVLYVRVGE 119 Query: 126 RAKYGNILLKKG 137 + N ++ G Sbjct: 120 LTPFSNTIVVAG 131 >UniRef50_B2UPT8 Putative uncharacterized protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UPT8_AKKM8 Length = 266 Score = 38.2 bits (88), Expect = 0.087, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 19/134 (14%) Query: 12 ELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSYAPPLV 71 +L K LA +G + I+ +++ FPA++ ++L ++ + E +++ P + Sbjct: 30 QLYKNLAIVGARNWIVIAESSFPAYTGTGIRTMVSDKTSDEVLLDVLNMLEEEAHVVPRI 89 Query: 72 M---MAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAF---------- 118 M + P + +RYRN ++ P F R + Sbjct: 90 MISSELRSVTEDYAPGI-KRYRNNINKMLPGRQ-----HFELMSRTINSLIEDAARQFNV 143 Query: 119 AIVITGERAKYGNI 132 ++ T Y NI Sbjct: 144 LVIKTKTSLPYSNI 157 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.163 0.501 Lambda K H 0.267 0.0500 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 943,657,547 Number of Sequences: 3077464 Number of extensions: 38196372 Number of successful extensions: 103499 Number of sequences better than 1.0e-01: 76 Number of HSP's better than 0.1 without gapping: 164 Number of HSP's successfully gapped in prelim test: 35 Number of HSP's that attempted gapping in prelim test: 103047 Number of HSP's gapped (non-prelim): 200 length of query: 140 length of database: 1,040,396,356 effective HSP length: 104 effective length of query: 36 effective length of database: 720,340,100 effective search space: 25932243600 effective search space used: 25932243600 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 88 (38.2 bits)