Phyre 2 alignment of P0AEN8 with c1yj5C_

Return to main results | Retrieve Phyre Job Id

Job Description | P0AEN8
Confidence | 5.48% | Date | Thu Jan 5 11:23:48 GMT 2012
Rank | 45 | Aligned Residues | 13
% Identity | 23% | Template | c1yj5C_
PDB info | PDB header:transferase | Chain: C: PDB Molecule:5' polynucleotide kinase-3' phosphatase fha domain; | PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 22 | . | . | . | . | . | . | . | 30 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | G | D | E | I | I | F | S | D | A | H | F | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | G | D | V | L | Y | L | V | N | G | L | Y | P
Template Known Secondary structure |  | T | T |  |  |  |  | S | S | S | S |  | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 89 | 90 | . | . | . | . | . | . | . | . | . | 100 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions