Phyre 2 Results for P0AEN8

Email | l.a.kelley@imperial.ac.uk
Description | P0AEN8
Date | Thu Jan 5 11:23:48 GMT 2012
Unique Job ID | d9e31f5a62f9b50a

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2wcvI_ |
|  | 100.0 | 100 | PDB header:isomerase Chain: I: PDB Molecule:l-fucose mutarotase; PDBTitle: crystal structure of bacterial fucu
2 | d2ob5a1 |
|  | 100.0 | 33 | Fold:RbsD-like Superfamily:RbsD-like Family:RbsD-like
3 | c2wcuB_ |
|  | 100.0 | 47 | PDB header:isomerase Chain: B: PDB Molecule:protein fucu homolog; PDBTitle: crystal structure of mammalian fucu
4 | c3mvkA_ |
|  | 100.0 | 41 | PDB header:isomerase Chain: A: PDB Molecule:protein fucu; PDBTitle: the crystal structure of fucu from bifidobacterium longum to 1.65a
5 | c3e7nB_ |
|  | 100.0 | 18 | PDB header:transport protein Chain: B: PDB Molecule:d-ribose high-affinity transport system; PDBTitle: crystal structure of d-ribose high-affinity transport system from2 salmonella typhimurium lt2
6 | d1ogda_ |
|  | 100.0 | 21 | Fold:RbsD-like Superfamily:RbsD-like Family:RbsD-like
7 | c3p13B_ |
|  | 100.0 | 16 | PDB header:isomerase Chain: B: PDB Molecule:d-ribose pyranase; PDBTitle: complex structure of d-ribose pyranase sa240 with d-ribose
8 | d1qkia1 |
|  | 26.7 | 15 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
9 | c1e1cA_ |
|  | 22.2 | 20 | PDB header:isomerase Chain: A: PDB Molecule:methylmalonyl-coa mutase alpha chain; PDBTitle: methylmalonyl-coa mutase h244a mutant
10 | d1e3da_ |
|  | 18.9 | 36 | Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit
11 | c2dgbA_ |
|  | 17.6 | 33 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein purs; PDBTitle: structure of thermus thermophilus purs in the p21 form
12 | d1t4aa_ |
|  | 16.3 | 18 | Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase
13 | d1frfs_ |
|  | 15.4 | 28 | Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit
14 | d1cc1s_ |
|  | 15.1 | 32 | Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit
15 | c2yx5A_ |
|  | 14.4 | 27 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0062 protein mj1593; PDBTitle: crystal structure of methanocaldococcus jannaschii purs, one of the2 subunits of formylglycinamide ribonucleotide amidotransferase in the3 purine biosynthetic pathway
16 | c3myrE_ |
|  | 14.0 | 24 | PDB header:oxidoreductase Chain: E: PDB Molecule:hydrogenase (nife) small subunit hyda; PDBTitle: crystal structure of [nife] hydrogenase from allochromatium vinosum in2 its ni-a state
17 | d1wuis1 |
|  | 13.8 | 24 | Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit
18 | c1h2aS_ |
|  | 13.7 | 24 | PDB header:oxidoreductase Chain: S: PDB Molecule:hydrogenase; PDBTitle: single crystals of hydrogenase from desulfovibrio vulgaris
19 | c3iymA_ |
|  | 13.0 | 24 | PDB header:virus Chain: A: PDB Molecule:capsid protein; PDBTitle: backbone trace of the capsid protein dimer of a fungal partitivirus2 from electron cryomicroscopy and homology modeling
20 | d1guza1 |
|  | 11.4 | 25 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like
21 | d1gtda_ |
| not modelled | 10.8 | 35 | Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase
22 | d176la_ |
| not modelled | 10.7 | 27 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme
23 | c3rgwS_ |
| not modelled | 10.3 | 28 | PDB header:oxidoreductase/oxidoreductase Chain: S: PDB Molecule:membrane-bound hydrogenase (nife) small subunit hoxk; PDBTitle: crystal structure at 1.5 a resolution of an h2-reduced, o2-tolerant2 hydrogenase from ralstonia eutropha unmasks a novel iron-sulfur3 cluster
24 | c2wpnA_ |
| not modelled | 10.1 | 36 | PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [nifese] hydrogenase, small subunit; PDBTitle: structure of the oxidised, as-isolated nifese hydrogenase2 from d. vulgaris hildenborough
25 | d5ldha1 |
| not modelled | 9.6 | 14 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like
26 | d1yq9a1 |
| not modelled | 8.8 | 35 | Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit
27 | d1vs6z1 |
| not modelled | 8.0 | 36 | Fold:L28p-like Superfamily:L28p-like Family:Ribosomal protein L31p
28 | d1llda1 |
| not modelled | 8.0 | 30 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like
29 | c1w1wF_ |
| not modelled | 7.7 | 20 | PDB header:cell adhesion Chain: F: PDB Molecule:sister chromatid cohesion protein 1; PDBTitle: sc smc1hd:scc1-c complex, atpgs
30 | d1w1we_ |
| not modelled | 7.7 | 20 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Rad21/Rec8-like
31 | d1vpka2 |
| not modelled | 7.7 | 9 | Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase III, beta subunit
32 | d189la_ |
| not modelled | 7.6 | 27 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme
33 | d1ldna1 |
| not modelled | 6.9 | 35 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like
34 | d1p37a_ |
| not modelled | 6.9 | 27 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme
35 | d2ldxa1 |
| not modelled | 6.7 | 25 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like
36 | d1swya_ |
| not modelled | 6.4 | 27 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme
37 | d1yjma1 |
| not modelled | 6.2 | 23 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain
38 | d1gpma3 |
| not modelled | 5.9 | 30 | Fold:Alpha-lytic protease prodomain-like Superfamily:GMP synthetase C-terminal dimerisation domain Family:GMP synthetase C-terminal dimerisation domain
39 | d1hyha1 |
| not modelled | 5.9 | 30 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like
40 | d1vq3a_ |
| not modelled | 5.8 | 27 | Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase
41 | d1cp2a_ |
| not modelled | 5.8 | 26 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like
42 | c2b664_ |
| not modelled | 5.6 | 36 | PDB header:ribosome Chain: 4: PDB Molecule:50s ribosomal protein l31; PDBTitle: 50s ribosomal subunit from a crystal structure of release factor rf1,2 trnas and mrna bound to the ribosome. this file contains the 50s3 subunit from a crystal structure of release factor rf1, trnas and4 mrna bound to the ribosome and is described in remark 400
43 | c2xd4A_ |
| not modelled | 5.6 | 9 | PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: nucleotide-bound structures of bacillus subtilis glycinamide2 ribonucleotide synthetase
44 | d1jkea_ |
| not modelled | 5.5 | 25 | Fold:DTD-like Superfamily:DTD-like Family:DTD-like
45 | c1yj5C_ |
| not modelled | 5.5 | 23 | PDB header:transferase Chain: C: PDB Molecule:5' polynucleotide kinase-3' phosphatase fha domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
46 | d1llca1 |
| not modelled | 5.5 | 20 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like
47 | c2zw2B_ |
| not modelled | 5.4 | 18 | PDB header:ligase Chain: B: PDB Molecule:putative uncharacterized protein sts178; PDBTitle: crystal structure of formylglycinamide ribonucleotide amidotransferase2 iii from sulfolobus tokodaii (stpurs)
48 | c3hl4B_ |
| not modelled | 5.2 | 10 | PDB header:transferase Chain: B: PDB Molecule:choline-phosphate cytidylyltransferase a; PDBTitle: crystal structure of a mammalian ctp:phosphocholine2 cytidylyltransferase with cdp-choline
49 | c2j034_ |
| not modelled | 5.1 | 36 | PDB header:ribosome Chain: 4: PDB Molecule:50s ribosomal protein l31; PDBTitle: structure of the thermus thermophilus 70s ribosome2 complexed with mrna, trna and paromomycin (part 4 of 4).3 this file contains the 50s subunit from molecule ii.