Phyre 2 alignment of P0AEN8 with d1gpma3

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Job Description | P0AEN8
Confidence | 5.92% | Date | Thu Jan 5 11:23:48 GMT 2012
Rank | 38 | Aligned Residues | 23
% Identity | 30% | Template | d1gpma3
SCOP info | Alpha-lytic protease prodomain-like | GMP synthetase C-terminal dimerisation domain | GMP synthetase C-terminal dimerisation domain
Resolution | 2.20

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 111 | . | . | . | . | . | . | . | . | 120 |  |  |  | . | . | . |  |  |  |  | . | . | . | . | . | . | 130 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | E | R | A | Q | K | A | F | A | I | . | . | . | V | I | T | . | . | . | . | G | E | R | A | K | Y | G | N | I | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | D | K | V | S | Q | A | F | T | V | F | L | P | V | R | S | V | G | V | M | G | D | G | R | K | Y | D | W | V | V
Template Known Secondary structure |  | G | G | G | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 441 | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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