Phyre 2 alignment of P0AEN8 with d1w1we_

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Job Description | P0AEN8
Confidence | 7.74% | Date | Thu Jan 5 11:23:48 GMT 2012
Rank | 30 | Aligned Residues | 25
% Identity | 20% | Template | d1w1we_
SCOP info | DNA/RNA-binding 3-helical bundle | "Winged helix" DNA-binding domain | Rad21/Rec8-like
Resolution | 2.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 110 | . | . |  |  |  |  | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | Y | E | . | . | . | . | R | A | Q | K | A | F | A | I | V | I | T | G | E | R | A | K | Y | G | N | I | L | L | K | K | G
Query Conservation |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | F | D | I | L | S | L | A | T | E | G | C | I | G | L | S | Q | T | . | . | . | E | A | F | G | N | I | K | I | D | A | K
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  | . | . | . | S | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 528 | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . |  |  |  | . | . | . | . | 550 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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