86 c3nlcA_ Probab=99.84   E-value=4.4e-20  Score=142.65  Aligned_columns=267  Identities=24%

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC--CCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             97768999897899999999999898199998888--8724411562421135554113336877762202455554211
Q batch____         1 MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQ--SALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSL   78 (419)
Q Consensus         1 M~yDViVIGaG~AGl~AA~~la~~G~~V~vlEk~~--GG~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (419)
                      ++-+|||||||+|||+||++|+++|++|+||||+.  ||++...+.......................+...........
T Consensus        92 ~~~~~vVVGaG~AGL~AA~~La~~G~~V~vlE~~~~~GGr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (534)
T c3nlcA_          92 LTERPIVIGFGPCGLFAGLVLAQXGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD  171 (534)
T ss_dssp             CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCC
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHCHHCCCCCEEEEHHH
T ss_conf             68867998896899999999997698199997888756430002455564201433444310110000025750110001


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCEEEECC
Q ss_conf             26678999999999987730710202455530121035520133211222331241265179832776544420021124
Q batch____        79 LEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAAS  158 (419)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (419)
                      ..     ....+..+++...+............                                               
T Consensus       172 ~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~-----------------------------------------------  199 (534)
T c3nlcA_         172 PN-----FYGRKVITEFVEAGAPEEILYVSKPH-----------------------------------------------  199 (534)
T ss_dssp             TT-----CHHHHHHHHHHHTTCCGGGGTBSSCC-----------------------------------------------
T ss_pred             HC-----CCHHHHHHHHHHCCCCCCCCCCCCCC-----------------------------------------------
T ss_conf             01-----56789999999769983002478523-----------------------------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCHHCCCCHHHHHHHHHC
Q ss_conf             44455555665433455433344555433311000104631245554200445676049964404104206899874200
Q batch____       159 LRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEK  238 (419)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  238 (419)
                                                                                                      
T Consensus       200 --------------------------------------------------------------------------------  199 (534)
T c3nlcA_         200 --------------------------------------------------------------------------------  199 (534)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             CCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCEEEEEEECCCEEEEEECCEEEEECC------
Q ss_conf             34048995475655684899999999999749804158733779820997999997299478998688999347------
Q batch____       239 LPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASG------  312 (419)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~a~g------  312 (419)
                                 ............+.+.+...++++++++.+.....++.........++.  .+.++.||+|+|      
T Consensus       200 -----------~~~~~~~~~~~~~~~~~~~~g~~i~~~~~v~~~~~~~~~~~~~~~~~~~--~i~A~aVIlAtGg~a~~~  266 (534)
T c3nlcA_         200 -----------IGTFKLVTXIEKXRATIIELGGEIRFSTRVDDLHXEDGQITGVTLSNGE--EIKSRHVVLAVGHSARDT  266 (534)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSC--EEECSCEEECCCTTCHHH
T ss_pred             -----------CCCCCCHHHHHHHHHHHHHCCCEEEECCEEEECCCCCCEEEEEEECCCE--EEECCEEEECCCCCHHHH
T ss_conf             -----------1322203689999999986897999587861010366402546732760--897787998288532467


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q batch____       313 --------------------------------------------------------------------------------  312 (419)
Q Consensus       313 --------------------------------------------------------------------------------  312 (419)
                                                                                                      
T Consensus       267 ~~~l~~~g~~~~~~~~a~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~  346 (534)
T c3nlcA_         267 FEXLHERGVYXEAKPFSVGFRIEHKQSXIDEARFGPNAGHPILGAADYKLVHHCKNGRTVYSFCXCPGGTVVAATSEEGR  346 (534)
T ss_dssp             HHHHHHTTCCCEECCEEEEEEEEEEHHHHHHHHTSTTTTCTTTCSCCCCCEEECTTSCEEEEEEEEEEEEEEECCCSTTC
T ss_pred             HHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCEEEECCCCCC
T ss_conf             87888749865565431001203431000110123334543344432101102467870046521676512320145653


Q ss_pred             -------------------------------------------------------------------------------C
Q ss_conf             -------------------------------------------------------------------------------4
Q batch____       313 -------------------------------------------------------------------------------S  313 (419)
Q Consensus       313 -------------------------------------------------------------------------------~  313 (419)
                                                                                                     .
T Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  426 (534)
T c3nlcA_         347 VVTNGXSQYSRAERNANSAIVVGISPEVDYPGDPLAGIRFQRELESNAYKLGGENYDAPAQKIGDFLKGRDPSQLGDVEP  426 (534)
T ss_dssp             CCEEEECCTTCCSSEEEEEEEEEECBTTTBCCSTTHHHHHHHHHHHHHHHHTTSSSCEEEEEHHHHHHTCTTCCCCSSCC
T ss_pred             CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHCC
T ss_conf             10033211111222334413663036743353100163101466667764167775418989988735552002221103


Q ss_pred             CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECEEEECCCCCC------CCCCCCCCCEEECCCCCCC
Q ss_conf             4541010133376530127754455556672222234640687260778676463------5677702887882220167
Q batch____       314 FFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRP------SQAGQTIENLFAIGSVLGG  387 (419)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~GGi~vd~~~~~------~~~~~~IpGLyaaGe~~GG  387 (419)
                      .+...+.........+..-...+..........++.+...+.++||+.+|...++      ..+.++|||||+|||.+| 
T Consensus       427 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~~~gGv~~~~~~~~~~~~~~~~~~t~I~GLY~aGe~ag-  505 (534)
T c3nlcA_         427 SFTPGIKLTDLSKALPPFAVEAIREAIPAFDRKIKGFASEDGLLTGVETRTSSPVCIKRGKDFQSVNLKGFYPAGEGAG-  505 (534)
T ss_dssp             CCSSCEEECCGGGTSCHHHHHHHHHHHHHHHTTSTTTTCTTCEEEEEECCSSCSEECCCTTTTSCTTCBTEEECHHHHT-
T ss_pred             CCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCCCCCCCCCEEEECCCCC-
T ss_conf             5585722344445568999999987344212212444567467535786135761341077631522897599131378-


Q ss_pred             CCHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             3133102415589999999999999971486
Q batch____       388 FDPIAQGCGGGVCAVSALHAAQQIAQRAGGQ  418 (419)
Q Consensus       388 ~~~~~~~~g~g~A~~~G~~Aa~~ia~~~~g~  418 (419)
                           +.+|.-.|+.+|++||+.|+++..|.
T Consensus       506 -----~~gGi~~Aa~sG~~aA~~i~~~l~~~  531 (534)
T c3nlcA_         506 -----YAGGILSAGIDGIKVAEAVARDIVAA  531 (534)
T ss_dssp             -----SCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             -----72037999999999999999987323