BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (89 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P37614 Uncharacterized protein yhhL n=131 Tax=Enterobac... 177 9e-44 UniRef50_A4TR74 Membrane protein n=27 Tax=Enterobacteriaceae Rep... 109 2e-23 UniRef50_Q7MZZ8 Similar to unknown protein YhhL of Escherichia c... 106 2e-22 UniRef50_C2LP10 Putative uncharacterized protein n=1 Tax=Proteus... 81 1e-14 UniRef50_A1SSK9 Putative uncharacterized protein n=1 Tax=Psychro... 56 4e-07 UniRef50_Q7MQ98 Predicted membrane protein n=59 Tax=Vibrionales ... 44 0.001 UniRef50_A8FPQ7 Putative uncharacterized protein n=8 Tax=Shewane... 42 0.008 UniRef50_Q1IDY1 Putative uncharacterized protein n=8 Tax=Pseudom... 40 0.020 UniRef50_A1SBB6 Putative uncharacterized protein n=10 Tax=Shewan... 39 0.047 UniRef50_B7UXE9 Putative uncharacterized protein n=6 Tax=Pseudom... 39 0.057 >UniRef50_P37614 Uncharacterized protein yhhL n=131 Tax=Enterobacteriaceae RepID=YHHL_ECOLI Length = 89 Score = 177 bits (449), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 89/89 (100%), Positives = 89/89 (100%) Query: 1 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP 60 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP Sbjct: 1 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP 60 Query: 61 QMTTAEKVRIFLFGVFELLAWQKKFKVKK 89 QMTTAEKVRIFLFGVFELLAWQKKFKVKK Sbjct: 61 QMTTAEKVRIFLFGVFELLAWQKKFKVKK 89 >UniRef50_A4TR74 Membrane protein n=27 Tax=Enterobacteriaceae RepID=A4TR74_YERPP Length = 90 Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 54/84 (64%), Positives = 69/84 (82%), Gaps = 1/84 (1%) Query: 1 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP 60 M IN+GRLLML VW F++LNL P+P+PL F++VA+IF VLMHG+QL LLKST PKD P Sbjct: 1 MWINLGRLLMLGVWFFILLNLFQPYPKPLRYFIHVAMIFMVLMHGLQLVLLKSTQPKDQP 60 Query: 61 QMTTAEKVRIFLFGVFELLAWQKK 84 ++ ++ +IF+FGVFELLAWQKK Sbjct: 61 -ISGLQQFKIFVFGVFELLAWQKK 83 >UniRef50_Q7MZZ8 Similar to unknown protein YhhL of Escherichia coli n=3 Tax=Enterobacteriaceae RepID=Q7MZZ8_PHOLL Length = 93 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 49/89 (55%), Positives = 71/89 (79%), Gaps = 1/89 (1%) Query: 1 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP 60 MLI +G+LLM+CVWGFLI NL+HPFP+PL F+++A+IF V+MH Q+ LLK++ PKD Sbjct: 1 MLIQLGKLLMICVWGFLIFNLIHPFPKPLKYFMDIAMIFMVVMHAFQMLLLKASQPKDQ- 59 Query: 61 QMTTAEKVRIFLFGVFELLAWQKKFKVKK 89 ++++ + +IF FGVFELL+ QKK + +K Sbjct: 60 KLSSLIQTKIFFFGVFELLSMQKKQRKEK 88 >UniRef50_C2LP10 Putative uncharacterized protein n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LP10_PROMI Length = 98 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 38/77 (49%), Positives = 57/77 (74%), Gaps = 1/77 (1%) Query: 10 MLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQMTTAEKVR 69 M+ VWGFL LNL+ PFP+PL F+++ALIF V+MHG+Q+A+ K+ P+D + + + + Sbjct: 1 MIGVWGFLCLNLISPFPKPLKYFMDIALIFMVIMHGLQIAMYKAGQPED-KKPSGLLQFK 59 Query: 70 IFLFGVFELLAWQKKFK 86 IF FG+FELL QK+ + Sbjct: 60 IFFFGIFELLRIQKELR 76 >UniRef50_A1SSK9 Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SSK9_PSYIN Length = 88 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 3/82 (3%) Query: 3 INIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQM 62 I G+LLML +WGFLI NL PFP + + L +MH MQL L+ + ++ Sbjct: 5 ITSGKLLMLAIWGFLIGNLFFPFPGQAALLFYIFLGLISVMHIMQLLLIYGAFAEK-LKL 63 Query: 63 TTAEKVRIFLFGVFELLAWQKK 84 T A+ +++F FGVF++ W+ K Sbjct: 64 TKADALQVFFFGVFKI--WELK 83 >UniRef50_Q7MQ98 Predicted membrane protein n=59 Tax=Vibrionales RepID=Q7MQ98_VIBVY Length = 88 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query: 13 VWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQMTTAEKVRIFL 72 VW L+ N+ PFP I + + F +MHG+Q+ + D MT EK I + Sbjct: 15 VWLILLFNIFSPFPGNAAIVLYIMTAFLFIMHGLQMLIFVGAF-GDKITMTRWEKNSILI 73 Query: 73 FGVFELLAWQKKF 85 FG+F LL ++K+ Sbjct: 74 FGIFALLDIRRKY 86 >UniRef50_A8FPQ7 Putative uncharacterized protein n=8 Tax=Shewanella RepID=A8FPQ7_SHESH Length = 96 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Query: 2 LINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQ 61 +I G+ + L W + NL+ PF + I + + L T MH Q+ + T+ K Sbjct: 4 VITTGKAVTLFAWLLMTYNLIMPFEGNIAIILYILLAITTFMHCFQVVIFH-TIFKSLLS 62 Query: 62 MTTAEKVRIFLFGVFELLAWQKK 84 + + +F+FG F LL ++ K Sbjct: 63 LKKGDYFSVFIFGAFSLLQYRSK 85 >UniRef50_Q1IDY1 Putative uncharacterized protein n=8 Tax=Pseudomonas RepID=Q1IDY1_PSEE4 Length = 91 Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 45/79 (56%), Gaps = 2/79 (2%) Query: 2 LINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQ 61 ++ +G+ L + W +++NL P P PLN+ +N A IF + +H +++ +L G Sbjct: 4 ILGLGKALTVVFWWVVLVNLFMPQPLPLNLLINAAGIFLLTLHVLEILFFNGSL--RGRS 61 Query: 62 MTTAEKVRIFLFGVFELLA 80 ++++I L G+F +++ Sbjct: 62 HRWFDRLQILLTGIFHVMS 80 >UniRef50_A1SBB6 Putative uncharacterized protein n=10 Tax=Shewanella RepID=A1SBB6_SHEAM Length = 97 Score = 38.9 bits (89), Expect = 0.047, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Query: 2 LINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQ 61 LI G+L L W + NL+ PF + + + L TV+MH QL + K Sbjct: 4 LIMFGKLATLGAWVMMGYNLLTPFDGNIGTLLKILLGVTVVMHSFQLGVFHLLFKKL-LP 62 Query: 62 MTTAEKVRIFLFGVFELLAWQ 82 + ++ +++F FGVF LL ++ Sbjct: 63 LKASDYLQVFAFGVFALLEYR 83 >UniRef50_B7UXE9 Putative uncharacterized protein n=6 Tax=Pseudomonas aeruginosa RepID=B7UXE9_PSEA8 Length = 99 Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 51/79 (64%), Gaps = 4/79 (5%) Query: 3 INIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTL-PKDGPQ 61 + +G+L+ L WG +++NL+HPF PLN +++A +L+H +++ +L L + P Sbjct: 5 LGLGKLVTLVFWGAVLVNLLHPFAYPLNWLLSIAGGLILLIHLIEILVLGGRLKARAHPW 64 Query: 62 MTTAEKVRIFLFGVFELLA 80 + +++++ LFGVF +LA Sbjct: 65 L---DRLQVLLFGVFHMLA 80 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P37614 Uncharacterized protein yhhL n=131 Tax=Enterobac... 97 2e-19 UniRef50_Q7MZZ8 Similar to unknown protein YhhL of Escherichia c... 89 5e-17 UniRef50_C2LP10 Putative uncharacterized protein n=1 Tax=Proteus... 86 3e-16 UniRef50_A4TR74 Membrane protein n=27 Tax=Enterobacteriaceae Rep... 85 6e-16 UniRef50_A1SSK9 Putative uncharacterized protein n=1 Tax=Psychro... 65 8e-10 UniRef50_Q7MQ98 Predicted membrane protein n=59 Tax=Vibrionales ... 61 9e-09 Sequences not found previously or not previously below threshold: UniRef50_A8FPQ7 Putative uncharacterized protein n=8 Tax=Shewane... 45 0.001 UniRef50_A1SBB6 Putative uncharacterized protein n=10 Tax=Shewan... 41 0.011 UniRef50_Q1IDY1 Putative uncharacterized protein n=8 Tax=Pseudom... 38 0.075 >UniRef50_P37614 Uncharacterized protein yhhL n=131 Tax=Enterobacteriaceae RepID=YHHL_ECOLI Length = 89 Score = 96.9 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 89/89 (100%), Positives = 89/89 (100%) Query: 1 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP 60 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP Sbjct: 1 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP 60 Query: 61 QMTTAEKVRIFLFGVFELLAWQKKFKVKK 89 QMTTAEKVRIFLFGVFELLAWQKKFKVKK Sbjct: 61 QMTTAEKVRIFLFGVFELLAWQKKFKVKK 89 >UniRef50_Q7MZZ8 Similar to unknown protein YhhL of Escherichia coli n=3 Tax=Enterobacteriaceae RepID=Q7MZZ8_PHOLL Length = 93 Score = 88.8 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 49/89 (55%), Positives = 71/89 (79%), Gaps = 1/89 (1%) Query: 1 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP 60 MLI +G+LLM+CVWGFLI NL+HPFP+PL F+++A+IF V+MH Q+ LLK++ PKD Sbjct: 1 MLIQLGKLLMICVWGFLIFNLIHPFPKPLKYFMDIAMIFMVVMHAFQMLLLKASQPKDQ- 59 Query: 61 QMTTAEKVRIFLFGVFELLAWQKKFKVKK 89 ++++ + +IF FGVFELL+ QKK + +K Sbjct: 60 KLSSLIQTKIFFFGVFELLSMQKKQRKEK 88 >UniRef50_C2LP10 Putative uncharacterized protein n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LP10_PROMI Length = 98 Score = 86.1 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 38/79 (48%), Positives = 58/79 (73%), Gaps = 1/79 (1%) Query: 10 MLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQMTTAEKVR 69 M+ VWGFL LNL+ PFP+PL F+++ALIF V+MHG+Q+A+ K+ P+D + + + + Sbjct: 1 MIGVWGFLCLNLISPFPKPLKYFMDIALIFMVIMHGLQIAMYKAGQPEDK-KPSGLLQFK 59 Query: 70 IFLFGVFELLAWQKKFKVK 88 IF FG+FELL QK+ + + Sbjct: 60 IFFFGIFELLRIQKELRKE 78 >UniRef50_A4TR74 Membrane protein n=27 Tax=Enterobacteriaceae RepID=A4TR74_YERPP Length = 90 Score = 85.4 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 54/85 (63%), Positives = 69/85 (81%), Gaps = 1/85 (1%) Query: 1 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP 60 M IN+GRLLML VW F++LNL P+P+PL F++VA+IF VLMHG+QL LLKST PKD P Sbjct: 1 MWINLGRLLMLGVWFFILLNLFQPYPKPLRYFIHVAMIFMVLMHGLQLVLLKSTQPKDQP 60 Query: 61 QMTTAEKVRIFLFGVFELLAWQKKF 85 ++ ++ +IF+FGVFELLAWQKK Sbjct: 61 -ISGLQQFKIFVFGVFELLAWQKKQ 84 >UniRef50_A1SSK9 Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SSK9_PSYIN Length = 88 Score = 65.0 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%) Query: 2 LINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQ 61 I G+LLML +WGFLI NL PFP + + L +MH MQL L+ + + Sbjct: 4 FITSGKLLMLAIWGFLIGNLFFPFPGQAALLFYIFLGLISVMHIMQLLLIYGAFAE-KLK 62 Query: 62 MTTAEKVRIFLFGVFELLAWQKKF 85 +T A+ +++F FGVF++ + + Sbjct: 63 LTKADALQVFFFGVFKIWELKGRL 86 >UniRef50_Q7MQ98 Predicted membrane protein n=59 Tax=Vibrionales RepID=Q7MQ98_VIBVY Length = 88 Score = 61.5 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%) Query: 2 LINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQ 61 L+ + + + VW L+ N+ PFP I + + F +MHG+Q+ + D Sbjct: 4 LLFLAKAAISFVWLILLFNIFSPFPGNAAIVLYIMTAFLFIMHGLQMLIFVGAF-GDKIT 62 Query: 62 MTTAEKVRIFLFGVFELLAWQKKF 85 MT EK I +FG+F LL ++K+ Sbjct: 63 MTRWEKNSILIFGIFALLDIRRKY 86 >UniRef50_A8FPQ7 Putative uncharacterized protein n=8 Tax=Shewanella RepID=A8FPQ7_SHESH Length = 96 Score = 44.5 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Query: 3 INIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQM 62 I G+ + L W + NL+ PF + I + + L T MH Q+ + + K + Sbjct: 5 ITTGKAVTLFAWLLMTYNLIMPFEGNIAIILYILLAITTFMHCFQVVIFHTIF-KSLLSL 63 Query: 63 TTAEKVRIFLFGVFELLAWQKK 84 + +F+FG F LL ++ K Sbjct: 64 KKGDYFSVFIFGAFSLLQYRSK 85 >UniRef50_A1SBB6 Putative uncharacterized protein n=10 Tax=Shewanella RepID=A1SBB6_SHEAM Length = 97 Score = 41.1 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Query: 2 LINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQ 61 LI G+L L W + NL+ PF + + + L TV+MH QL + K P Sbjct: 4 LIMFGKLATLGAWVMMGYNLLTPFDGNIGTLLKILLGVTVVMHSFQLGVFHLLFKKLLPL 63 Query: 62 MTTAEKVRIFLFGVFELLAWQ 82 + + +++F FGVF LL ++ Sbjct: 64 KAS-DYLQVFAFGVFALLEYR 83 >UniRef50_Q1IDY1 Putative uncharacterized protein n=8 Tax=Pseudomonas RepID=Q1IDY1_PSEE4 Length = 91 Score = 38.4 bits (88), Expect = 0.075, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 47/85 (55%), Gaps = 2/85 (2%) Query: 2 LINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQ 61 ++ +G+ L + W +++NL P P PLN+ +N A IF + +H +++ +L + Sbjct: 4 ILGLGKALTVVFWWVVLVNLFMPQPLPLNLLINAAGIFLLTLHVLEILFFNGSLRGRSHR 63 Query: 62 MTTAEKVRIFLFGVFELLAWQKKFK 86 ++++I L G+F +++ + + Sbjct: 64 W--FDRLQILLTGIFHVMSIPRPQE 86 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P37614 Uncharacterized protein yhhL n=131 Tax=Enterobac... 92 4e-18 UniRef50_Q7MZZ8 Similar to unknown protein YhhL of Escherichia c... 85 5e-16 UniRef50_C2LP10 Putative uncharacterized protein n=1 Tax=Proteus... 83 2e-15 UniRef50_A4TR74 Membrane protein n=27 Tax=Enterobacteriaceae Rep... 82 7e-15 UniRef50_A8FPQ7 Putative uncharacterized protein n=8 Tax=Shewane... 70 2e-11 UniRef50_A1SSK9 Putative uncharacterized protein n=1 Tax=Psychro... 67 2e-10 UniRef50_Q7MQ98 Predicted membrane protein n=59 Tax=Vibrionales ... 65 7e-10 Sequences not found previously or not previously below threshold: UniRef50_A1SBB6 Putative uncharacterized protein n=10 Tax=Shewan... 51 1e-05 UniRef50_Q1IDY1 Putative uncharacterized protein n=8 Tax=Pseudom... 38 0.074 >UniRef50_P37614 Uncharacterized protein yhhL n=131 Tax=Enterobacteriaceae RepID=YHHL_ECOLI Length = 89 Score = 92.3 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 89/89 (100%), Positives = 89/89 (100%) Query: 1 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP 60 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP Sbjct: 1 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP 60 Query: 61 QMTTAEKVRIFLFGVFELLAWQKKFKVKK 89 QMTTAEKVRIFLFGVFELLAWQKKFKVKK Sbjct: 61 QMTTAEKVRIFLFGVFELLAWQKKFKVKK 89 >UniRef50_Q7MZZ8 Similar to unknown protein YhhL of Escherichia coli n=3 Tax=Enterobacteriaceae RepID=Q7MZZ8_PHOLL Length = 93 Score = 85.4 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 49/89 (55%), Positives = 71/89 (79%), Gaps = 1/89 (1%) Query: 1 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP 60 MLI +G+LLM+CVWGFLI NL+HPFP+PL F+++A+IF V+MH Q+ LLK++ PKD Sbjct: 1 MLIQLGKLLMICVWGFLIFNLIHPFPKPLKYFMDIAMIFMVVMHAFQMLLLKASQPKDQ- 59 Query: 61 QMTTAEKVRIFLFGVFELLAWQKKFKVKK 89 ++++ + +IF FGVFELL+ QKK + +K Sbjct: 60 KLSSLIQTKIFFFGVFELLSMQKKQRKEK 88 >UniRef50_C2LP10 Putative uncharacterized protein n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LP10_PROMI Length = 98 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 38/79 (48%), Positives = 58/79 (73%), Gaps = 1/79 (1%) Query: 10 MLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQMTTAEKVR 69 M+ VWGFL LNL+ PFP+PL F+++ALIF V+MHG+Q+A+ K+ P+D + + + + Sbjct: 1 MIGVWGFLCLNLISPFPKPLKYFMDIALIFMVIMHGLQIAMYKAGQPEDK-KPSGLLQFK 59 Query: 70 IFLFGVFELLAWQKKFKVK 88 IF FG+FELL QK+ + + Sbjct: 60 IFFFGIFELLRIQKELRKE 78 >UniRef50_A4TR74 Membrane protein n=27 Tax=Enterobacteriaceae RepID=A4TR74_YERPP Length = 90 Score = 81.5 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 54/85 (63%), Positives = 69/85 (81%), Gaps = 1/85 (1%) Query: 1 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP 60 M IN+GRLLML VW F++LNL P+P+PL F++VA+IF VLMHG+QL LLKST PKD P Sbjct: 1 MWINLGRLLMLGVWFFILLNLFQPYPKPLRYFIHVAMIFMVLMHGLQLVLLKSTQPKDQP 60 Query: 61 QMTTAEKVRIFLFGVFELLAWQKKF 85 ++ ++ +IF+FGVFELLAWQKK Sbjct: 61 -ISGLQQFKIFVFGVFELLAWQKKQ 84 >UniRef50_A8FPQ7 Putative uncharacterized protein n=8 Tax=Shewanella RepID=A8FPQ7_SHESH Length = 96 Score = 70.0 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Query: 3 INIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQM 62 I G+ + L W + NL+ PF + I + + L T MH Q+ + + K + Sbjct: 5 ITTGKAVTLFAWLLMTYNLIMPFEGNIAIILYILLAITTFMHCFQVVIFHTIF-KSLLSL 63 Query: 63 TTAEKVRIFLFGVFELLAWQKK 84 + +F+FG F LL ++ K Sbjct: 64 KKGDYFSVFIFGAFSLLQYRSK 85 >UniRef50_A1SSK9 Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SSK9_PSYIN Length = 88 Score = 66.5 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%) Query: 2 LINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQ 61 I G+LLML +WGFLI NL PFP + + L +MH MQL L+ + + Sbjct: 4 FITSGKLLMLAIWGFLIGNLFFPFPGQAALLFYIFLGLISVMHIMQLLLIYGAFAE-KLK 62 Query: 62 MTTAEKVRIFLFGVFELLAWQKKF 85 +T A+ +++F FGVF++ + + Sbjct: 63 LTKADALQVFFFGVFKIWELKGRL 86 >UniRef50_Q7MQ98 Predicted membrane protein n=59 Tax=Vibrionales RepID=Q7MQ98_VIBVY Length = 88 Score = 65.0 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%) Query: 2 LINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQ 61 L+ + + + VW L+ N+ PFP I + + F +MHG+Q+ + D Sbjct: 4 LLFLAKAAISFVWLILLFNIFSPFPGNAAIVLYIMTAFLFIMHGLQMLIFVGAF-GDKIT 62 Query: 62 MTTAEKVRIFLFGVFELLAWQKKF 85 MT EK I +FG+F LL ++K+ Sbjct: 63 MTRWEKNSILIFGIFALLDIRRKY 86 >UniRef50_A1SBB6 Putative uncharacterized protein n=10 Tax=Shewanella RepID=A1SBB6_SHEAM Length = 97 Score = 51.1 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Query: 2 LINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQ 61 LI G+L L W + NL+ PF + + + L TV+MH QL + K P Sbjct: 4 LIMFGKLATLGAWVMMGYNLLTPFDGNIGTLLKILLGVTVVMHSFQLGVFHLLFKKLLPL 63 Query: 62 MTTAEKVRIFLFGVFELLAWQ 82 + + +++F FGVF LL ++ Sbjct: 64 KAS-DYLQVFAFGVFALLEYR 83 >UniRef50_Q1IDY1 Putative uncharacterized protein n=8 Tax=Pseudomonas RepID=Q1IDY1_PSEE4 Length = 91 Score = 38.4 bits (88), Expect = 0.074, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 47/85 (55%), Gaps = 2/85 (2%) Query: 2 LINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQ 61 ++ +G+ L + W +++NL P P PLN+ +N A IF + +H +++ +L + Sbjct: 4 ILGLGKALTVVFWWVVLVNLFMPQPLPLNLLINAAGIFLLTLHVLEILFFNGSLRGRSHR 63 Query: 62 MTTAEKVRIFLFGVFELLAWQKKFK 86 ++++I L G+F +++ + + Sbjct: 64 W--FDRLQILLTGIFHVMSIPRPQE 86 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.326 0.146 0.405 Lambda K H 0.267 0.0451 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 515,803,663 Number of Sequences: 3077464 Number of extensions: 16202698 Number of successful extensions: 96781 Number of sequences better than 1.0e-01: 19 Number of HSP's better than 0.1 without gapping: 30 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 96720 Number of HSP's gapped (non-prelim): 48 length of query: 89 length of database: 1,040,396,356 effective HSP length: 59 effective length of query: 30 effective length of database: 858,825,980 effective search space: 25764779400 effective search space used: 25764779400 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.1 bits) S2: 87 (38.0 bits)