Phyre 2 alignment of P08339 with d1gxma_

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Job Description | P08339
Confidence | 1.21% | Date | Thu Jan 5 11:01:11 GMT 2012
Rank | 100 | Aligned Residues | 27
% Identity | 30% | Template | d1gxma_
SCOP info | alpha/alpha toroid | Family 10 polysaccharide lyase | Family 10 polysaccharide lyase
Resolution | 1.32

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | R | P | A | W | R | C | Q | Y | D | K | . | . | L | H | R | V | P | F | R | S | P | E | L | R | L | D | S | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | L | T | V | W | C | A | Q | H | G | A | L | D | Y | Q | P | K | K | A | R | A | Y | E | L | E | S | L | S | G
Template Known Secondary structure |  |  |  |  |  |  |  | S |  |  |  | T | T | T |  |  | B |  |  |  | S | T | T |  |  | S | S |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 505 | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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