16/01/2012 13:59:39 : INFO  : Run start: Mon Jan 16 13:59:37 GMT 2012
16/01/2012 13:59:49 : INFO  : Initialised job
16/01/2012 13:59:53 : INFO  : Renaming log file 'phyre2_20120116_135935.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/d8d1658deff2e7d6/phyre_20120116_135935.log'
16/01/2012 13:59:55 : INFO  : Initialised job:
Sequence
>batch____
MHMVTYPCLTSRRFQLALIHRRVVDKRTSMHSRTASESTGARIHRPWCARHQVRPAWRCQ
YDKLHRVPFRSPELRLDSGPGYTTGSYRY

16/01/2012 13:59:58 : INFO  : Checked sequence
16/01/2012 14:00:04 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 14:00:06 : INFO  : PSI-BLAST 3 iterations
16/01/2012 14:00:46 : INFO  : PSI-BLAST 5 iterations
16/01/2012 14:01:27 : INFO  : Finished PSI-BLAST
16/01/2012 14:01:32 : INFO  : Running Buildali to generate a3m file
16/01/2012 14:03:44 : INFO  : Converting to HMM
16/01/2012 14:03:47 : INFO  : Calibrating HMM
16/01/2012 14:04:01 : INFO  : Searching HMM database
16/01/2012 14:06:49 : INFO  : Finished buildali
16/01/2012 14:06:52 : INFO  : Predicting secondary structure
16/01/2012 14:07:07 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 14:07:10 : INFO  : Predicting Disordered regions
16/01/2012 14:07:19 : INFO  : Predicted Disorder (Disopred)
16/01/2012 14:07:22 : INFO  : Running memsat_svm check
16/01/2012 14:10:18 : INFO  : Globular protein
16/01/2012 14:10:20 : INFO  : Predicted Transmembrane (memsat_svm) ID 'd8d1658deff2e7d6'
16/01/2012 14:10:24 : INFO  : Initialising fold library search
16/01/2012 14:10:30 : INFO  : Initialised search input
16/01/2012 14:10:35 : INFO  : Building Ensemble models
16/01/2012 14:10:42 : INFO  : Building hh.c1nvpC_.model.1.pdb
16/01/2012 14:11:12 : INFO  : Building c1nvpC_.1.pdb
16/01/2012 14:11:41 : INFO  : Building d1nvpc_.2.pdb
16/01/2012 14:12:07 : INFO  : Building d1nh2c_.3.pdb
16/01/2012 14:12:33 : INFO  : Building c1nh2C_.4.pdb
16/01/2012 14:12:58 : INFO  : Building d1ytfc_.5.pdb
16/01/2012 14:13:23 : INFO  : Building c3eatX_.6.pdb
16/01/2012 14:13:49 : INFO  : Building c1rm1C_.7.pdb
16/01/2012 14:14:15 : INFO  : Building d2vy4a1.8.pdb
16/01/2012 14:14:38 : INFO  : Building c3pvjB_.9.pdb
16/01/2012 14:15:03 : INFO  : Building d3c96a2.10.pdb
16/01/2012 14:15:25 : INFO  : Building d1x3ha2.11.pdb
16/01/2012 14:15:47 : INFO  : Building d1m06f_.12.pdb
16/01/2012 14:16:10 : INFO  : Building d1cov1_.13.pdb
16/01/2012 14:16:35 : INFO  : Building d1qgia_.14.pdb
16/01/2012 14:16:59 : INFO  : Building c2gl1A_.15.pdb
16/01/2012 14:17:23 : INFO  : Building d1iwga4.16.pdb
16/01/2012 14:17:53 : INFO  : Building d1h8pa2.17.pdb
16/01/2012 14:18:18 : INFO  : Building d1d4m1_.18.pdb
16/01/2012 14:18:43 : INFO  : Building c1y4hA_.19.pdb
16/01/2012 14:19:09 : INFO  : Building d1bev1_.20.pdb
16/01/2012 14:20:06 : INFO  : Finished HH model building
16/01/2012 14:20:11 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 14:22:54 : INFO  : html domain output complete ID 'd8d1658deff2e7d6'
16/01/2012 14:29:15 : INFO  : Run end  : Mon Jan 16 14:29:13 GMT 2012
