Phyre 2 alignment of P08339 with d1np7a1

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Job Description | P08339
Confidence | 1.73% | Date | Thu Jan 5 11:01:11 GMT 2012
Rank | 67 | Aligned Residues | 21
% Identity | 29% | Template | d1np7a1
SCOP info | Cryptochrome/photolyase FAD-binding domain | Cryptochrome/photolyase FAD-binding domain | Cryptochrome/photolyase FAD-binding domain
Resolution | 1.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | H | R | P | W | C | A | R | H | Q | V | R | P | A | W | R | C | Q | Y | D | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | H | Q | P | W | L | L | S | A | T | E | Q | K | Q | W | G | V | Q | L | G | V
Template Known Secondary structure |  | G | G |  | G | G | G |  |  |  |  |  |  |  |  | T | T |  |  | B | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 443 | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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