Phyre 2 alignment of P07862 with d1c0pa1

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Job Description | P07862
Confidence | 84.16% | Date | Thu Jan 5 11:00:37 GMT 2012
Rank | 324 | Aligned Residues | 34
% Identity | 21% | Template | d1c0pa1
SCOP info | Nucleotide-binding domain | Nucleotide-binding domain | D-aminoacid oxidase, N-terminal domain
Resolution | 1.20

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | T | . | . | . | D | K | I | A | V | L | L | G | G | T | S | A | E | R | E | V | S | L | N | S | G | A | A | V | L | A | G | L | R | E | G | G | I | D | A | Y | P | V | D | P | K
Query Conservation |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | M | M | H | S | Q | K | R | V | V | V | L | G | S | G | . | . | . | . | . | . | . | . | . | V | I | G | L | S | S | A | L | I | L | A | R | K | G | Y | S | V | H | I | L | A | R | D
Template Known Secondary structure |  |  |  |  |  | S |  |  |  |  |  |  |  |  | S | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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