Phyre 2 alignment of P00893 with c2k53A_

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Job Description | P00893
Confidence | 27.97% | Date | Thu Jan 5 10:57:03 GMT 2012
Rank | 220 | Aligned Residues | 55
% Identity | 22% | Template | c2k53A_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:a3dk08 protein; | PDBTitle: nmr solution structure of a3dk08 protein from clostridium2 thermocellum: northeast structural genomics consortium3 target cmr9
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | E | M | L | S | G | A | E | M | V | . | . | . | . | . | . | V | R | S | L | I | D | Q | G | V | K | Q | V | F | G | Y | P | G | G | A | V | L | D | I | Y | D | A | L | H | T | V | G | G | I | D | H | V | L | V | R | H | E | Q | A | A | V | H | M | A
Query Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | D | M | I | I | A | D | V | L | Q | M | D | R | G | T | A | P | I | F | I | N | N | G | M | . | H | C | L | G | C | P | S | S | M | G | E | S | I | E | D | A | C | A | V | H | . | G | I | D | A | D | K | L | V | K | E | L | N | E | Y | F | E | K
Template Known Secondary structure |  | T | T | S | B |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  | T | T |  | . |  |  |  | S | S |  |  |  |  |  | S | B |  |  |  |  |  |  |  |  | . | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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