10 c1jscA_ Probab=100.00  E-value=0  Score=757.73  Aligned_columns=522  Identities=43%

Q ss_pred             CCCEEHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCCHHHH
Q ss_conf             97501899999999986997999818984078999998469938998188588999999999862874999982731688
Q batch____         1 MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGIDHVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGAT   80 (574)
Q Consensus         1 m~~~tga~~i~~~L~~~Gv~~vfg~pG~~~~~l~~~l~~~~~i~~i~~~~E~~A~~~A~Gya~~~g~~~v~~~t~GpG~~   80 (574)
                      |-.|||+++|++.|+++||++|||+||+++.+++++|+++++++++.++||++|+|||+||||++||++||++|+|||++
T Consensus         7 ~~~~tg~~~l~~~L~~~Gv~~vfg~pG~~~~~l~~al~~~~~i~~i~~~~E~~A~~~A~Gyar~tg~~~v~~~t~G~g~~   86 (541)
T c1jscA_           7 FVGLTGGQIFNEMMSRQNVDTVFGYPGGAILPVYDAIHNSDKFNFVLPKHEQGAGHMAEGYARASGKPGVVLVTSGPGAT   86 (541)
T ss_dssp             TTTCBHHHHHHHHHHHTTCCEEEECCCGGGHHHHHHHHHCTTSEEECCSSHHHHHHHHHHHHHHHSSCEEEEECSTHHHH
T ss_pred             CEEEEHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHH
T ss_conf             00101999999999986998999839985088999998469818998198589999999999862875999982740688


Q ss_pred             HHHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             87999998876089889998789857769997644488888573211476469989999999999999861899649998
Q batch____        81 NAITGIATAYMDSIPLVVLSGQVATSLIGYDAFQECDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVD  160 (574)
Q Consensus        81 n~~~~i~~A~~~~~Pli~i~g~~p~~~~g~~~~Q~~d~~~~~~~~~k~~~~v~~~~~~~~~l~~A~~~a~~~~~gPv~l~  160 (574)
                      |+++++++|+.+++|||+|+||+|....+++++|+.||.++|++++||++++++|+++++.+++|++.|+++++|||||+
T Consensus        87 n~~~~i~~A~~~~~Pli~I~g~~~~~~~~~~~~q~~d~~~~~~~~~k~~~~v~~~~~~~~~i~~A~~~a~~~~~gPV~l~  166 (541)
T c1jscA_          87 NVVTPMADAFADGIPMVVFTGQVPTSAIGTDAFQEADVVGISRSCTKWNVMVKSVEELPLRINEAFEIATSGRPGPVLVD  166 (541)
T ss_dssp             TTHHHHHHHHHHTCCEEEEEEECCGGGTTSCCTTCCCHHHHTSTTSSEEEECCSGGGHHHHHHHHHHHHHSSSCCEEEEE
T ss_pred             HHHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             77999998766199789998789968848997632268888550015787439989999999999999861899639998


Q ss_pred             ECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CCHHHHHHHHHHHHHHCCCEEE
Q ss_conf             022530253675433555455555687778998999999998750798399989886-8788999999999981898250
Q batch____       161 LPKDILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVAAKKPVVYVGGGA-ITAGCHQQLKETVEALNLPVVC  239 (574)
Q Consensus       161 iP~dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~L~~a~rpvii~G~g~-~~~~~~~~l~~lae~l~~pv~~  239 (574)
                      +|.|++.++.+.+    .+...........++...+++++++|.++|||+|++|.++ ++.++.++|.+|||++++||++
T Consensus       167 ip~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~ak~pvi~~G~~~~~~~~~~~~l~~lae~~~~pv~~  242 (541)
T c1jscA_         167 LPKDVTAAILRNP----IPTKTTLPSAQDEFVMQSINKAADLINLAKKPVLYVGAGILNHADGPRLLKELSDRAQIPVTT  242 (541)
T ss_dssp             EEHHHHHSBCCSC----EEGGGGSCCCTHHHHHHHHHHHHHHHHHCSSEEEEECGGGGSSTTHHHHHHHHHHHTTCCEEE
T ss_pred             ECCCHHHCCCCCC----CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEE
T ss_conf             2350220425754----354563366876689889999999986079739997787668978999999999980897883


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC---------CCCCEEEEECCCHHHH
Q ss_conf             4000525678886320332455798999998639889996781484301210113---------7984599974994681
Q batch____       240 SLMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVIFAVGVRFDDRTTNNLAKY---------CPNATVLHIDIDPTSI  310 (574)
Q Consensus       240 ~~~~~~~~~~~~p~~~G~~g~~~~~~~~~~l~~aD~il~lG~~l~~~~~~~~~~~---------~~~~~~i~i~~d~~~~  310 (574)
                      +.++|++|+++||+|+|.+|..+...++++++++|+||.+|++++++.+.+|..+         .++.++||+|+|+.++
T Consensus       243 t~~~~~~~~~~~p~~~g~~g~~~~~~~~~~l~~aD~il~iG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~  322 (541)
T c1jscA_         243 TLQGLGSFDQEDPKSLDMLGMHGCATANLAVQNADLIIAVGARFDDRVTGNISKFAPEARRAAAEGRGGIIHFEVSPKNI  322 (541)
T ss_dssp             CTTTTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCHHHHSSGGGSSHHHHHHHHTTSCEEEEEESCGGGT
T ss_pred             CHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHC
T ss_conf             20007566888874202102457989999986398899978876822025654336521012336786189984893780


Q ss_pred             CCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC---C
Q ss_conf             8623562267319999999999862202344434889999999987765310346777668898999999999678---9
Q batch____       311 SKTVTADIPIVGDARQVLEQMLELLSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTK---G  387 (574)
Q Consensus       311 ~~~~~~~~~i~~d~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~  387 (574)
                      ++++..++.+++|++.+|++|.+.+  ........+...+......+.  ..........++++..+++.|++.++   +
T Consensus       323 ~~~~~~~~~i~~d~~~~l~~l~~~l--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  398 (541)
T c1jscA_         323 NKVVQTQIAVEGDATTNLGKMMSKI--FPVKERSEWFAQINKWKKEYP--YAYMEETPGSKIKPQTVIKKLSKVANDTGR  398 (541)
T ss_dssp             TSSSCCSEEEESCHHHHHHHHGGGS--CCCCCCHHHHHHHHHHHTTSC--CCCCCCCSSSCCCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCCCEEEEECCHHHHHHHHHHHC--CCCCCCHHHHHHHHHHHHHHH--HHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             9744650477307999999999840--256666268999999886312--310134888888989999999998201489


Q ss_pred             CEEEEECCCCHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCHHHHHHHHHCCCC
Q ss_conf             81999758504677875281678887997460112100578999988518877599997261310086999999970898
Q batch____       388 DAYVTSDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGSIQMNIQELSTALQYELP  467 (574)
Q Consensus       388 ~~iiv~d~g~~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~aiG~ala~~~~~vv~i~GDgsf~~~~~eL~ta~~~~lp  467 (574)
                      +.+++.|+|++..|...+++++.|++++.++++++||+++++|+|+++++|+|+||+++|||+|+|++++|+|++++++|
T Consensus       399 ~~i~~~d~g~~~~~~~~~l~~~~~~~~~~~~~~~~mG~~~~~aiG~ala~~~~~vv~~~GDg~f~~~~~~L~ta~~~~~~  478 (541)
T c1jscA_         399 HVIVTTGVGQHQMWAAQHWTWRNPHTFITSGGLGTMGYGLPAAIGAQVAKPESLVIDIDGDASFNMTLTELSSAVQAGTP  478 (541)
T ss_dssp             CEEEEECSSHHHHHHHHHSCCCSTTCEECCCSSCCTTCHHHHHHHHHHHCTTSEEEEEEEHHHHHHHGGGHHHHHHHTCC
T ss_pred             CEEEEECCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCHHHHHHHHHCCCC
T ss_conf             68999678613787885463678987996462003565899999998528887299997333641195899999972898


Q ss_pred             EEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf             59999847872465311110268876666666898988999965981899689999999999999720479858999874
Q batch____       468 VLVVNLNNRYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLAEAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTV  547 (574)
Q Consensus       468 i~ivV~NN~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~iA~a~G~~~~~v~~~~el~~al~~a~~~~~~~~p~lIev~v  547 (574)
                      +++||+||++|++++                 +.|||.++|++||+++++|++.+||+.+|+++++   ++||+||||++
T Consensus       479 i~iiV~nN~~~~~~~-----------------~~~d~~~la~a~G~~~~~v~~~~el~~al~~a~~---~~~p~lIev~v  538 (541)
T c1jscA_         479 VKILILNNEESHTHQ-----------------LNPDFIKLAEAMGLKGLRVKKQEELDAKLKEFVS---TKGPVLLEVEV  538 (541)
T ss_dssp             CEEEEEECCCCCCCC-----------------CCCCHHHHHHHHTSEEEEECSHHHHHHHHHHHHH---CSSCEEEEEEC
T ss_pred             EEEEEEECCCCCCCC-----------------CCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHH---CCCCEEEEEEC
T ss_conf             499998478775225-----------------7999889998659817995899999999999996---79988999975


Q ss_pred             CCC
Q ss_conf             812
Q batch____       548 DGS  550 (574)
Q Consensus       548 ~~~  550 (574)
                      |++
T Consensus       539 d~e  541 (541)
T c1jscA_         539 DKK  541 (541)
T ss_dssp             CCC
T ss_pred             CCC
T ss_conf             899