12 d1yuba_ Probab=100.00  E-value=0  Score=398.87  Aligned_columns=241  Identities=23%

Q ss_pred             CCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHCC
Q ss_conf             98520037300330295305478999999997389988889997798738999999624929998299999999998533
Q batch____         1 MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPF   80 (273)
Q Consensus         1 ~~~~~~~g~~~kk~~GQnFL~d~~i~~~iv~~~~~~~~~~VlEiG~G~G~lT~~ll~~~~~v~~iE~d~~~~~~l~~~~~   80 (273)
                      ||.        +++||||||+|++++++|++.+++.++++|||||||+|.+|..|++.+++|+++|+|+++++.+++++.
T Consensus         1 ~~~--------~~k~gQnFl~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lT~~L~~~~~~v~aiEid~~l~~~l~~~~~   72 (245)
T d1yuba_           1 MNK--------NIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK   72 (245)
T ss_dssp             CCC--------CCCSCCCBCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT
T ss_pred             CCC--------CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHCC
T ss_conf             997--------765354437798999999996588878889997798738999998613954999359999999997425


Q ss_pred             CCCCCEEEECCCCCCCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCHH
Q ss_conf             27983899752001894584101488249995098887158999998255673106886307888876248999863489
Q batch____        81 LGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL  160 (273)
Q Consensus        81 ~~~~~~ii~~D~l~~~~~~~~~~~~~~~~vv~NlPy~i~s~il~~~l~~~~~~~~~~~~~qkE~A~Rl~A~pg~k~y~~l  160 (273)
                      .+++++++++|++++++++     ..++.|+||+||+|+|+|+++++.. ..+..+++|+|+|||+|++|     .||++
T Consensus        73 ~~~~~~ii~~D~l~~~~~~-----~~~~~vv~NlPY~iss~il~~~l~~-~~~~~~v~m~Qke~a~Rl~a-----~~g~l  141 (245)
T d1yuba_          73 LNTRVTLIHQDILQFQFPN-----KQRYKIVGNIPYHLSTQIIKKVVFE-SRASDIYLIVEEGFYKRTLD-----IHRTL  141 (245)
T ss_dssp             TCSEEEECCSCCTTTTCCC-----SSEEEEEEECCSSSCHHHHHHHHHH-CCCEEEEEEEESSHHHHHHC-----GGGSH
T ss_pred             CCCCEEEEECCHHCCCCCC-----CCCCEEEEECCHHHHHHHHHHHHHC-CCCCEEEEEEEHHHHHHHHC-----CCCHH
T ss_conf             6896699974321088887-----7833798408500013899999731-79322999854888775544-----88657


Q ss_pred             HHHHHHHCCEEEEEEECHHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
Q ss_conf             99898660224769755123337898648999999658787887698999999999974868579988542198889996
Q batch____       161 SVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTG  240 (273)
Q Consensus       161 sv~~q~~~~~~~l~~vp~~~F~P~P~Vds~vv~l~~~~~~~~~~~d~~~~~~~v~~~F~~rrK~l~~~L~~~~~~~~l~~  240 (273)
                      ||++|++++++.+++||+++|+|+|+|||++|+|+||+. +.+..+.+.|..+++.+|++|||++.+...-   .+.++.
T Consensus       142 sv~~q~~~~~~~~~~v~~~~F~P~PkVdS~vi~l~~k~~-~~~~~~~~~~~~~~~~~f~~rrk~l~~~~~~---~~~l~~  217 (245)
T d1yuba_         142 GLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTT-DVPDKYWKLYTYFVSKWVNREYRQLFTKNQF---HQAMKH  217 (245)
T ss_dssp             HHHTTTTBCCCEEEEECCTTSBSSCCSCEEEEEECBCSC-SSCHHHHHHHHHHHHHHHHTCHHHHCSSSHH---HHHHHH
T ss_pred             HHHHHHHCCEEEEEEECHHHCCCCCCCEEEEEEEEECCC-CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH---HHHHHH
T ss_conf             674421403126796441006489861289999995588-8882118999999999841100002698999---999998


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             787714383016899999999999632
Q batch____       241 MGIDPAMRAENISVAQYCQMANYLAEN  267 (273)
Q Consensus       241 ~~i~~~~R~~~Ls~~~~~~L~~~~~~~  267 (273)
                      ++++   |+++||++||++|++.+.+.
T Consensus       218 ~~~~---r~~~ls~~~~~~L~~~~~~~  241 (245)
T d1yuba_         218 AKVN---NLSTITYEQVLSIFNSYLLF  241 (245)
T ss_dssp             TTCS---CTTSCCSHHHHHHHHHHHHH
T ss_pred             CCCC---CHHHCCHHHHHHHHHHHHHH
T ss_conf             5889---74468999999999999850