28 c2pm9A_ Probab=99.88   E-value=1.2e-19  Score=139.25  Aligned_columns=345  Identities=13%

Q ss_pred             CCCEEECCCCCEEEEEEECCCCCC----CCCEEEEEECCCC-CEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEE
Q ss_conf             122178899987999982578776----7745999988998-47999965888716678998999889999248882579
Q batch____        25 TNTNTWTPDSQWLVFDVRPSGASF----TGETIERVNIHTG-EVEVIYRASQGAHVGVVTVHPKSEKYVFIHGPENPDET   99 (415)
Q Consensus        25 ~~~~~fSPDG~~iaf~s~~~g~~~----~~~~i~~~~~~~g-~~~~l~~~~~~~~~~~~~wSpDG~~ia~~~~~~~~~~~   99 (415)
                      +...+|||||+.++.+....|...    ..+.|++|++.++ ..+.+........+..++|||||+.|| .++.++.+.+
T Consensus         6 ~~~~awsP~~~~llA~g~~~g~~~as~s~D~~v~lWd~~~~~~~~~l~~~~~~~~V~~va~spdg~~la-sg~~Dg~v~i   84 (384)
T c2pm9A_           6 TATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIA-GALDNGSLEL   84 (384)
T ss_dssp             SCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEE-EEESSSCEEE
T ss_pred             EEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCEEE-EEECCCCEEE
T ss_conf             899998888771999981798389885289719999666888402788661488589999889989899-9857983999


Q ss_pred             EEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECC-CCCEEEEECCCCEEEEEECCCCCEEEEEECCCC
Q ss_conf             9854897348981589638997136753100134356404688889-985899952897099985468835777614687
Q batch____       100 WHYDFHHRRGVIVEGGKMSNLDAMDITAPYTPGVLRGGSHVHVFSP-NGERVSFTYNDHVMHELDPALDLRNVGVAAPFG  178 (415)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (415)
                      |.......                ..........+........|.+ ++..++....++.+..|+...............
T Consensus        85 w~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~  148 (384)
T c2pm9A_          85 YSTNEANN----------------AINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLT  148 (384)
T ss_dssp             ECCSSTTS----------------CCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBC
T ss_pred             EEEECCCC----------------CCCCCCEEECCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCEEEEECCCCE
T ss_conf             76513455----------------54200000001111000123305872122202552012457678750023125420


Q ss_pred             CEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCCEE
Q ss_conf             35898641567777456999936778729998701676202576056650567688789988998743245422677213
Q batch____       179 PVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKA  258 (415)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~~~~~~~  258 (415)
                      ....                  ............................+.............................
T Consensus       149 ~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (384)
T c2pm9A_         149 PGQS------------------MSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSV  210 (384)
T ss_dssp             CCCS------------------CCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEE
T ss_pred             EEEC------------------CCCCEEEEEEEEECCCCCEEEEECCCCEEEEECCCCCCEEEEECCCCCCCCCEEEECC
T ss_conf             0000------------------2420013564200254523664046512565125567211100135533110010000


Q ss_pred             EEEECCCCEEEEEEECCCCCCEEEEEE-----CCCCEEECCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCC
Q ss_conf             333226641568981788870899942-----587217512478524589889998279999537974899996478871
Q batch____       259 AGDAPLSGTETTLPAPPRGVVQRRLTF-----THHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGE  333 (415)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~g~~~~~l~~-----~~~~~~~~~~~~~~~~~~~sPdG~~~a~~s~~~~~~~~l~~~~~~~~~  333 (415)
                      ........................++.     ..................++|....+......+.   .+.+++...++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~---~i~iwd~~~~~  287 (384)
T c2pm9A_         211 VEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN---TVLLWNPESAE  287 (384)
T ss_dssp             EEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS---EEEEECSSSCC
T ss_pred             EEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC---EEEEEECCCCE
T ss_conf             000478750134412786444202330221222111111111111111111111101220135566---36640078870


Q ss_pred             EEEEECCCCCCEEEEEECCCC-CEEEEEE-CCEEEEEECCCCC-----------EEEEEECCCCCCCEEEEEECCCCCEE
Q ss_conf             478533788721225999999-8899980-9969999899986-----------89986247887730024899999889
Q batch____       334 PRQLTHNKTDIQSAFNWHPSG-EWLGFVL-DNRIACAHAQSGE-----------VEYLTEHHANSPSADAVVFSPDGQWL  400 (415)
Q Consensus       334 ~~~~~~~~~~~~~~~a~SPDG-~~la~~s-d~~i~~~d~~~g~-----------~~~~~~~~~~~~~~~~~~fSPDG~~L  400 (415)
                      +...+.+|...+.+++|||++ ++||+++ |++|+||++.++.           ...+..+..|...+.+++||||||.+
T Consensus       288 ~~~~l~~h~~~v~~v~fsP~~~~~lAs~s~Dg~i~iw~l~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~g~l~  367 (384)
T c2pm9A_         288 QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLV  367 (384)
T ss_dssp             EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCCCCSCCCSSCCCCCSTTCCCSCCCEEETTTEEE
T ss_pred             EEEEECCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEE
T ss_conf             54564366786148997689878899974698199986677775654455566543221555456865799982898399


Q ss_pred             EEEECCE
Q ss_conf             9996998
Q batch____       401 AWMEGGQ  407 (415)
Q Consensus       401 a~~~~g~  407 (415)
                      |+..+++
T Consensus       368 a~~~~~~  374 (384)
T c2pm9A_         368 QITPDGK  374 (384)
T ss_dssp             CBCTTSS
T ss_pred             EEECCCC
T ss_conf             9966998