| 1 | c2z9oB_ |
|
 |
100.0 |
99 |
PDB header:replication/dna Chain: B: PDB Molecule:replication initiation protein;
PDBTitle: crystal structure of the dimeric form of repe in complex with the repe2 operator dna
|
| 2 | c2nraC_ |
|
 |
100.0 |
19 |
PDB header:replication/dna Chain: C: PDB Molecule:pi protein;
PDBTitle: crystal structure of pi initiator protein in complex with iteron dna
|
| 3 | d1repc2 |
|
 |
100.0 |
100 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Replication initiation protein |
| 4 | d2nrac2 |
|
 |
100.0 |
21 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Replication initiation protein |
| 5 | d1hkqa_ |
|
 |
99.9 |
22 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Replication initiation protein |
| 6 | d2nrac1 |
|
 |
99.9 |
18 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Replication initiation protein |
| 7 | d1repc1 |
|
 |
99.9 |
99 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Replication initiation protein |
| 8 | d1jhfa1 |
|
 |
86.4 |
27 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:LexA repressor, N-terminal DNA-binding domain |
| 9 | c3r0aB_ |
|
 |
73.7 |
14 |
PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator;
PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196)
|
| 10 | c2v79B_ |
|
 |
68.5 |
13 |
PDB header:dna-binding protein Chain: B: PDB Molecule:dna replication protein dnad;
PDBTitle: crystal structure of the n-terminal domain of dnad from2 bacillus subtilis
|
| 11 | d1stza1 |
|
 |
67.8 |
20 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Heat-inducible transcription repressor HrcA, N-terminal domain |
| 12 | d2cg4a1 |
|
 |
60.1 |
13 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain |
| 13 | d2d1ha1 |
|
 |
58.1 |
15 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:TrmB-like |
| 14 | c2vn2B_ |
|
 |
52.8 |
18 |
PDB header:replication Chain: B: PDB Molecule:chromosome replication initiation protein;
PDBTitle: crystal structure of the n-terminal domain of dnad protein2 from geobacillus kaustophilus hta426
|
| 15 | c1x3uA_ |
|
 |
51.1 |
15 |
PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein fixj;
PDBTitle: solution structure of the c-terminal transcriptional2 activator domain of fixj from sinorhizobium melilot
|
| 16 | d1a04a1 |
|
 |
50.2 |
18 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:GerE-like (LuxR/UhpA family of transcriptional regulators) |
| 17 | d1ku3a_ |
|
 |
46.8 |
21 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain |
| 18 | d1ku7a_ |
|
 |
46.5 |
22 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain |
| 19 | c1zljE_ |
|
 |
45.5 |
16 |
PDB header:transcription Chain: E: PDB Molecule:dormancy survival regulator;
PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic2 response regulator dosr c-terminal domain
|
| 20 | d1s7oa_ |
|
 |
41.8 |
25 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:YlxM/p13-like |
| 21 | d2p7vb1 |
|
not modelled |
41.4 |
13 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain |
| 22 | d1ttya_ |
|
not modelled |
41.0 |
13 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain |
| 23 | d1sfxa_ |
|
not modelled |
40.7 |
22 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:TrmB-like |
| 24 | d1yioa1 |
|
not modelled |
40.6 |
16 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:GerE-like (LuxR/UhpA family of transcriptional regulators) |
| 25 | c3nqoB_ |
|
not modelled |
38.9 |
13 |
PDB header:transcription Chain: B: PDB Molecule:marr-family transcriptional regulator;
PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution
|
| 26 | d1fsea_ |
|
not modelled |
37.6 |
15 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:GerE-like (LuxR/UhpA family of transcriptional regulators) |
| 27 | d2etha1 |
|
not modelled |
36.8 |
14 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
| 28 | c2rnjA_ |
|
not modelled |
36.1 |
14 |
PDB header:transcription Chain: A: PDB Molecule:response regulator protein vrar;
PDBTitle: nmr structure of the s. aureus vrar dna binding domain
|
| 29 | d2cyya1 |
|
not modelled |
35.5 |
23 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain |
| 30 | d1i1ga1 |
|
not modelled |
33.9 |
11 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain |
| 31 | d2cfxa1 |
|
not modelled |
32.8 |
11 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain |
| 32 | c2l4aA_ |
|
not modelled |
32.8 |
20 |
PDB header:dna binding protein Chain: A: PDB Molecule:leucine responsive regulatory protein;
PDBTitle: nmr structure of the dna-binding domain of e.coli lrp
|
| 33 | d1l3la1 |
|
not modelled |
32.6 |
22 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:GerE-like (LuxR/UhpA family of transcriptional regulators) |
| 34 | d1fnna1 |
|
not modelled |
32.2 |
16 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Helicase DNA-binding domain |
| 35 | d1or7a1 |
|
not modelled |
31.3 |
7 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain |
| 36 | c2krfB_ |
|
not modelled |
30.8 |
9 |
PDB header:transcription Chain: B: PDB Molecule:transcriptional regulatory protein coma;
PDBTitle: nmr solution structure of the dna binding domain of competence protein2 a
|
| 37 | c2fxaB_ |
|
not modelled |
29.0 |
8 |
PDB header:transcription Chain: B: PDB Molecule:protease production regulatory protein hpr;
PDBTitle: structure of the protease production regulatory protein hpr from2 bacillus subtilis.
|
| 38 | c3iwfA_ |
|
not modelled |
28.3 |
9 |
PDB header:transcription regulator Chain: A: PDB Molecule:transcription regulator rpir family;
PDBTitle: the crystal structure of the n-terminal domain of a rpir2 transcriptional regulator from staphylococcus epidermidis to 1.4a
|
| 39 | d1xsva_ |
|
not modelled |
27.5 |
13 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:YlxM/p13-like |
| 40 | d1p4wa_ |
|
not modelled |
27.4 |
20 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:GerE-like (LuxR/UhpA family of transcriptional regulators) |
| 41 | c3hugA_ |
|
not modelled |
26.1 |
9 |
PDB header:transcription/membrane protein Chain: A: PDB Molecule:rna polymerase sigma factor;
PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl
|
| 42 | c2wteB_ |
|
not modelled |
25.7 |
13 |
PDB header:antiviral protein Chain: B: PDB Molecule:csa3;
PDBTitle: the structure of the crispr-associated protein, csa3, from2 sulfolobus solfataricus at 1.8 angstrom resolution.
|
| 43 | c2qwwB_ |
|
not modelled |
25.0 |
15 |
PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution
|
| 44 | c3k2zA_ |
|
not modelled |
24.6 |
26 |
PDB header:hydrolase Chain: A: PDB Molecule:lexa repressor;
PDBTitle: crystal structure of a lexa protein from thermotoga maritima
|
| 45 | d1rp3a2 |
|
not modelled |
24.6 |
12 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain |
| 46 | c2o8xA_ |
|
not modelled |
24.0 |
7 |
PDB header:transcription Chain: A: PDB Molecule:probable rna polymerase sigma-c factor;
PDBTitle: crystal structure of the "-35 element" promoter recognition domain of2 mycobacterium tuberculosis sigc
|
| 47 | d1hsja1 |
|
not modelled |
23.8 |
11 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
| 48 | d2fbia1 |
|
not modelled |
23.2 |
16 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
| 49 | c2cg4B_ |
|
not modelled |
22.8 |
13 |
PDB header:transcription Chain: B: PDB Molecule:regulatory protein asnc;
PDBTitle: structure of e.coli asnc
|
| 50 | d2oz6a1 |
|
not modelled |
21.6 |
11 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:CAP C-terminal domain-like |
| 51 | c2q0oA_ |
|
not modelled |
21.2 |
16 |
PDB header:transcription Chain: A: PDB Molecule:probable transcriptional activator protein trar;
PDBTitle: crystal structure of an anti-activation complex in bacterial quorum2 sensing
|
| 52 | c3qp5C_ |
|
not modelled |
20.0 |
11 |
PDB header:transcription Chain: C: PDB Molecule:cvir transcriptional regulator;
PDBTitle: crystal structure of cvir bound to antagonist chlorolactone (cl)
|
| 53 | d1dpua_ |
|
not modelled |
19.0 |
21 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal domain of RPA32 |
| 54 | c1dpuA_ |
|
not modelled |
19.0 |
21 |
PDB header:dna binding protein Chain: A: PDB Molecule:replication protein a (rpa32) c-terminal domain;
PDBTitle: solution structure of the c-terminal domain of human rpa322 complexed with ung2(73-88)
|
| 55 | d1ku9a_ |
|
not modelled |
18.6 |
9 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:DNA-binding protein Mj223 |
| 56 | d1i5za1 |
|
not modelled |
18.6 |
9 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:CAP C-terminal domain-like |
| 57 | d2gaua1 |
|
not modelled |
18.1 |
7 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:CAP C-terminal domain-like |
| 58 | d2frha1 |
|
not modelled |
17.5 |
13 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
| 59 | d1smyf2 |
|
not modelled |
17.2 |
27 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain |
| 60 | c3sztB_ |
|
not modelled |
17.2 |
16 |
PDB header:transcription Chain: B: PDB Molecule:quorum-sensing control repressor;
PDBTitle: quorum sensing control repressor, qscr, bound to n-3-oxo-dodecanoyl-l-2 homoserine lactone
|
| 61 | c2k9lA_ |
|
not modelled |
16.1 |
10 |
PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpon;
PDBTitle: structure of the core binding domain of sigma54
|
| 62 | c2l3iA_ |
|
not modelled |
16.0 |
18 |
PDB header:antimicrobial protein Chain: A: PDB Molecule:aoxki4a, antimicrobial peptide in spider venom;
PDBTitle: oxki4a, spider derived antimicrobial peptide
|
| 63 | d2dt5a1 |
|
not modelled |
15.9 |
11 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Transcriptional repressor Rex, N-terminal domain |
| 64 | c1h0mD_ |
|
not modelled |
14.1 |
20 |
PDB header:transcription/dna Chain: D: PDB Molecule:transcriptional activator protein trar;
PDBTitle: three-dimensional structure of the quorum sensing protein2 trar bound to its autoinducer and to its target dna
|
| 65 | c1hsjA_ |
|
not modelled |
12.8 |
10 |
PDB header:transcription/sugar binding protein Chain: A: PDB Molecule:fusion protein consisting of staphylococcus
PDBTitle: sarr mbp fusion structure
|
| 66 | c3cloC_ |
|
not modelled |
12.4 |
16 |
PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of putative transcriptional regulator containing a2 luxr dna binding domain (np_811094.1) from bacteroides3 thetaiotaomicron vpi-5482 at 2.04 a resolution
|
| 67 | c2e1cA_ |
|
not modelled |
12.1 |
22 |
PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519;
PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex
|
| 68 | d1p4xa2 |
|
not modelled |
12.0 |
12 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
| 69 | c3mzyA_ |
|
not modelled |
11.9 |
13 |
PDB header:rna binding protein Chain: A: PDB Molecule:rna polymerase sigma-h factor;
PDBTitle: the crystal structure of the rna polymerase sigma-h factor from2 fusobacterium nucleatum to 2.5a
|
| 70 | d2coha1 |
|
not modelled |
11.9 |
11 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:CAP C-terminal domain-like |
| 71 | d2o8ra1 |
|
not modelled |
11.0 |
19 |
Fold:Spectrin repeat-like Superfamily:PPK N-terminal domain-like Family:PPK N-terminal domain-like |
| 72 | d1lnwa_ |
|
not modelled |
10.6 |
13 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
| 73 | c1p4xA_ |
|
not modelled |
10.5 |
9 |
PDB header:transcription Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue;
PDBTitle: crystal structure of sars protein from staphylococcus aureus
|
| 74 | d2o3fa1 |
|
not modelled |
10.5 |
10 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:RpiR-like |
| 75 | c2o3fC_ |
|
not modelled |
10.4 |
10 |
PDB header:transcription Chain: C: PDB Molecule:putative hth-type transcriptional regulator ybbh;
PDBTitle: structural genomics, the crystal structure of the n-2 terminal domain of the putative transcriptional regulator3 ybbh from bacillus subtilis subsp. subtilis str. 168.
|
| 76 | d1j5ya1 |
|
not modelled |
10.4 |
21 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Biotin repressor-like |
| 77 | d3broa1 |
|
not modelled |
10.4 |
15 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
| 78 | d1p4xa1 |
|
not modelled |
9.8 |
12 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
| 79 | d1xdpa1 |
|
not modelled |
9.6 |
25 |
Fold:Spectrin repeat-like Superfamily:PPK N-terminal domain-like Family:PPK N-terminal domain-like |
| 80 | d1d5ya1 |
|
not modelled |
9.3 |
9 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator |
| 81 | c1wsuA_ |
|
not modelled |
9.3 |
19 |
PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor;
PDBTitle: c-terminal domain of elongation factor selb complexed with2 secis rna
|
| 82 | c2vbzA_ |
|
not modelled |
8.5 |
16 |
PDB header:dna-binding protein Chain: A: PDB Molecule:transcriptional regulatory protein;
PDBTitle: feast or famine regulatory protein (rv3291c)from m.2 tuberculosis complexed with l-tryptophan
|
| 83 | c2e7xA_ |
|
not modelled |
8.5 |
14 |
PDB header:transcription regulator Chain: A: PDB Molecule:150aa long hypothetical transcriptional regulator;
PDBTitle: structure of the lrp/asnc like transcriptional regulator from2 sulfolobus tokodaii 7 complexed with its cognate ligand
|
| 84 | d1fs2b1 |
|
not modelled |
8.2 |
7 |
Fold:Skp1 dimerisation domain-like Superfamily:Skp1 dimerisation domain-like Family:Skp1 dimerisation domain-like |
| 85 | c2gqqB_ |
|
not modelled |
8.0 |
20 |
PDB header:transcription Chain: B: PDB Molecule:leucine-responsive regulatory protein;
PDBTitle: crystal structure of e. coli leucine-responsive regulatory protein2 (lrp)
|
| 86 | c2ia0A_ |
|
not modelled |
7.9 |
11 |
PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative hth-type transcriptional regulator pf0864;
PDBTitle: transcriptional regulatory protein pf0864 from pyrococcus furiosus a2 member of the asnc family (pf0864)
|
| 87 | d2aq0a1 |
|
not modelled |
7.8 |
10 |
Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like |
| 88 | d1jt6a1 |
|
not modelled |
7.5 |
5 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain |
| 89 | c2rdpA_ |
|
not modelled |
7.4 |
16 |
PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator marr;
PDBTitle: the structure of a marr family protein from bacillus2 stearothermophilus
|
| 90 | d2a61a1 |
|
not modelled |
7.3 |
14 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
| 91 | c2k9mA_ |
|
not modelled |
7.3 |
10 |
PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpon;
PDBTitle: structure of the core binding domain of sigma54
|
| 92 | c2p6tH_ |
|
not modelled |
7.3 |
16 |
PDB header:transcription Chain: H: PDB Molecule:transcriptional regulator, lrp/asnc family;
PDBTitle: crystal structure of transcriptional regulator nmb0573 and l-leucine2 complex from neisseria meningitidis
|
| 93 | d2g3ba1 |
|
not modelled |
6.9 |
16 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain |
| 94 | d2ovra1 |
|
not modelled |
6.8 |
12 |
Fold:Skp1 dimerisation domain-like Superfamily:Skp1 dimerisation domain-like Family:Skp1 dimerisation domain-like |
| 95 | d1biaa1 |
|
not modelled |
6.8 |
19 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Biotin repressor-like |
| 96 | c3boqB_ |
|
not modelled |
6.7 |
13 |
PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of marr family transcriptional regulator from2 silicibacter pomeroyi
|
| 97 | d2fxaa1 |
|
not modelled |
6.6 |
11 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
| 98 | c2plyB_ |
|
not modelled |
6.5 |
19 |
PDB header:translation/rna Chain: B: PDB Molecule:selenocysteine-specific elongation factor;
PDBTitle: structure of the mrna binding fragment of elongation factor2 selb in complex with secis rna.
|
| 99 | c3bpxB_ |
|
not modelled |
6.5 |
12 |
PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of marr
|