BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (99 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P32162 UPF0381 protein yiiS n=61 Tax=Enterobacteriaceae... 197 8e-50 UniRef50_D0Z807 Putative uncharacterized protein n=2 Tax=Edwards... 106 2e-22 UniRef50_C4X908 Putative uncharacterized protein n=5 Tax=Klebsie... 97 1e-19 UniRef50_P0AD34 UPF0381 protein yfcZ n=137 Tax=Enterobacteriacea... 72 5e-12 UniRef50_P44686 UPF0381 protein HI0400 n=31 Tax=Gammaproteobacte... 64 2e-09 UniRef50_C6AKB2 DNA mismatch repair protein n=10 Tax=Gammaproteo... 63 3e-09 UniRef50_Q7VKK6 Putative uncharacterized protein n=5 Tax=Pasteur... 60 2e-08 UniRef50_A8ADP0 Putative uncharacterized protein n=2 Tax=Enterob... 60 2e-08 UniRef50_B8F341 Possible DNA mismatch repair protein n=2 Tax=Hae... 59 6e-08 UniRef50_B8F3Q3 tRNA-dihydrouridine synthase A n=2 Tax=Haemophil... 43 0.003 UniRef50_Q7MFA3 Uncharacterized protein conserved in bacteria n=... 42 0.006 >UniRef50_P32162 UPF0381 protein yiiS n=61 Tax=Enterobacteriaceae RepID=YIIS_ECOLI Length = 99 Score = 197 bits (501), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 99/99 (100%), Positives = 99/99 (100%) Query: 1 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG 60 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG Sbjct: 1 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG 60 Query: 61 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA 99 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA Sbjct: 61 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA 99 >UniRef50_D0Z807 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=D0Z807_EDWTE Length = 98 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 50/97 (51%), Positives = 68/97 (70%) Query: 1 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG 60 MKDVVDKCS KGCAIDIG+V+DNDNCT+ ++ +A+R+EAE + +L A + + Sbjct: 1 MKDVVDKCSNKGCAIDIGSVLDNDNCTTVITQAYASRDEAEKQLAQLTAKAQRVAQQEYP 60 Query: 61 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRS 97 + + I + EG+ L+A F FSCQAE +IFELSLR Sbjct: 61 CIITHDISEKEGEFVLNAHFNFSCQAETVIFELSLRH 97 >UniRef50_C4X908 Putative uncharacterized protein n=5 Tax=Klebsiella RepID=C4X908_KLEPN Length = 99 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/98 (57%), Positives = 70/98 (71%) Query: 1 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG 60 MKDVVDKCSTKGCAID+GT+IDN++C + + F +REEAES + ++E AAA + A E Sbjct: 1 MKDVVDKCSTKGCAIDVGTIIDNEDCVYRAEKVFPSREEAESTVAAVRERAAAAAPASEP 60 Query: 61 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSL 98 V Y I V+LD + FSCQAE IIFELSLR+L Sbjct: 61 PQVDYTIVAAGDAVKLDLSIAFSCQAEKIIFELSLRNL 98 >UniRef50_P0AD34 UPF0381 protein yfcZ n=137 Tax=Enterobacteriaceae RepID=YFCZ_ECOL6 Length = 94 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 2/84 (2%) Query: 13 CAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEG 72 C +D+GT++DN +CT+ +SR FA R EAE + L E A + S E + + Sbjct: 13 CCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVES--EPCKITPTFTEESD 70 Query: 73 QVELDAAFTFSCQAEMIIFELSLR 96 V LD FTF+C+AEM+IF+L LR Sbjct: 71 GVRLDIDFTFACEAEMLIFQLGLR 94 >UniRef50_P44686 UPF0381 protein HI0400 n=31 Tax=Gammaproteobacteria RepID=Y400_HAEIN Length = 95 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 54/82 (65%), Gaps = 2/82 (2%) Query: 15 IDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEGQV 74 +D+GT+ID +C+ + +F++T +A + + +L + A T S + + +I +E V Sbjct: 16 VDVGTIIDGSDCSVEVHQFYSTEADANAVLERLTKKARNTES--DPCEIKSEIVAVENGV 73 Query: 75 ELDAAFTFSCQAEMIIFELSLR 96 +L+A+FTFSCQAE +IFEL+ R Sbjct: 74 QLNASFTFSCQAEAMIFELANR 95 >UniRef50_C6AKB2 DNA mismatch repair protein n=10 Tax=Gammaproteobacteria RepID=C6AKB2_AGGAN Length = 96 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%) Query: 13 CAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEG 72 C +D+GTVID +CT F + +AT E A+ + L E A A S + + I +E Sbjct: 15 CCVDVGTVIDGSDCTIDFEQVYATEELAKEALNYLTEKAKAAES--DPCHITSDISAVEN 72 Query: 73 QVELDAAFTFSCQAEMIIFELSLR 96 +L A F FSCQAE +IF+LS R Sbjct: 73 GYKLKAQFEFSCQAESMIFQLSTR 96 >UniRef50_Q7VKK6 Putative uncharacterized protein n=5 Tax=Pasteurellaceae RepID=Q7VKK6_HAEDU Length = 138 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 3/88 (3%) Query: 12 GC-AIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDL 70 GC D+G++IDN +KF + +AT+E+AE+ + KL + A T + + ++ I + Sbjct: 53 GCNTFDVGSIIDNSERDAKFEKVYATQEQAEAVLAKLVQKARDTET--DSCEISSNILPV 110 Query: 71 EGQVELDAAFTFSCQAEMIIFELSLRSL 98 E L A F FSCQAE++IF+L R+ Sbjct: 111 EAGFLLTANFDFSCQAEVVIFQLGTRAF 138 >UniRef50_A8ADP0 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A8ADP0_CITK8 Length = 80 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 2/82 (2%) Query: 15 IDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEGQV 74 +D+GT++DN +CT+ +SR F R +AE + L E A S E + + V Sbjct: 1 MDVGTIMDNSDCTASYSRVFENRAQAEETLAALTEKARGVES--EPCQITSTFTEEAEGV 58 Query: 75 ELDAAFTFSCQAEMIIFELSLR 96 LD F F+C+AE +IF+L LR Sbjct: 59 RLDIDFVFACEAETLIFQLGLR 80 >UniRef50_B8F341 Possible DNA mismatch repair protein n=2 Tax=Haemophilus parasuis RepID=B8F341_HAEPS Length = 91 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 2/82 (2%) Query: 15 IDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEGQV 74 ID+GT+IDN +C F++ + T+ EAE + L A AT S E ++ +I E Sbjct: 12 IDVGTIIDNSDCAVNFTQLYTTKAEAEDALAFLTSKARATES--EPCEISSEIISTENGF 69 Query: 75 ELDAAFTFSCQAEMIIFELSLR 96 +L A F FS Q E +IFEL +R Sbjct: 70 QLTACFKFSYQVESMIFELGIR 91 >UniRef50_B8F3Q3 tRNA-dihydrouridine synthase A n=2 Tax=Haemophilus parasuis RepID=B8F3Q3_HAEPS Length = 97 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 8 CSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKI 67 C C ++ DN + T + + + T+ +AE + L A A E +++ +I Sbjct: 11 CCGGICKPSSTSMFDNADSTIELALVYPTQADAEQGLATLT--AKAREVESEPCNISSQI 68 Query: 68 KDLEGQVELDAAFTFSCQAEMIIFELSLR 96 +E L A F FSCQAE +IF++ LR Sbjct: 69 SQIEDGFLLQAKFLFSCQAEAVIFQMKLR 97 >UniRef50_Q7MFA3 Uncharacterized protein conserved in bacteria n=57 Tax=Vibrionales RepID=Q7MFA3_VIBVY Length = 99 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 6/93 (6%) Query: 8 CSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKI 67 C GCA +IG +I + + + + ++E ++ K ELA A + +V Y Sbjct: 11 CEACGCAGEIGFIIKEGDDVADVTIYAGSKELLQAEFAKYLELAKAVNE-----NVEYNT 65 Query: 68 KDL-EGQVELDAAFTFSCQAEMIIFELSLRSLA 99 DL + EL A F F AE +IFEL RSL+ Sbjct: 66 TDLTDDSTELTARFKFEVSAEKLIFELKSRSLS 98 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D0Z807 Putative uncharacterized protein n=2 Tax=Edwards... 133 1e-30 UniRef50_P32162 UPF0381 protein yiiS n=61 Tax=Enterobacteriaceae... 127 1e-28 UniRef50_C4X908 Putative uncharacterized protein n=5 Tax=Klebsie... 111 6e-24 UniRef50_Q7VKK6 Putative uncharacterized protein n=5 Tax=Pasteur... 109 3e-23 UniRef50_P0AD34 UPF0381 protein yfcZ n=137 Tax=Enterobacteriacea... 107 1e-22 UniRef50_A8ADP0 Putative uncharacterized protein n=2 Tax=Enterob... 103 2e-21 UniRef50_C6AKB2 DNA mismatch repair protein n=10 Tax=Gammaproteo... 103 3e-21 UniRef50_B8F341 Possible DNA mismatch repair protein n=2 Tax=Hae... 102 3e-21 UniRef50_P44686 UPF0381 protein HI0400 n=31 Tax=Gammaproteobacte... 99 4e-20 Sequences not found previously or not previously below threshold: UniRef50_P44027 UPF0381 protein HI0636 n=26 Tax=Pasteurellaceae ... 77 2e-13 UniRef50_B8F3Q3 tRNA-dihydrouridine synthase A n=2 Tax=Haemophil... 77 2e-13 UniRef50_B0UTX1 Putative uncharacterized protein n=9 Tax=Pasteur... 63 4e-09 UniRef50_C4L7R4 Putative uncharacterized protein n=1 Tax=Tolumon... 47 3e-04 UniRef50_Q7MFA3 Uncharacterized protein conserved in bacteria n=... 43 0.003 UniRef50_A0KF70 Putative uncharacterized protein n=2 Tax=Aeromon... 42 0.006 UniRef50_A1STA8 Putative uncharacterized protein n=2 Tax=Psychro... 39 0.035 >UniRef50_D0Z807 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=D0Z807_EDWTE Length = 98 Score = 133 bits (335), Expect = 1e-30, Method: Composition-based stats. Identities = 50/97 (51%), Positives = 68/97 (70%) Query: 1 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG 60 MKDVVDKCS KGCAIDIG+V+DNDNCT+ ++ +A+R+EAE + +L A + + Sbjct: 1 MKDVVDKCSNKGCAIDIGSVLDNDNCTTVITQAYASRDEAEKQLAQLTAKAQRVAQQEYP 60 Query: 61 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRS 97 + + I + EG+ L+A F FSCQAE +IFELSLR Sbjct: 61 CIITHDISEKEGEFVLNAHFNFSCQAETVIFELSLRH 97 >UniRef50_P32162 UPF0381 protein yiiS n=61 Tax=Enterobacteriaceae RepID=YIIS_ECOLI Length = 99 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 99/99 (100%), Positives = 99/99 (100%) Query: 1 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG 60 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG Sbjct: 1 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG 60 Query: 61 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA 99 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA Sbjct: 61 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA 99 >UniRef50_C4X908 Putative uncharacterized protein n=5 Tax=Klebsiella RepID=C4X908_KLEPN Length = 99 Score = 111 bits (278), Expect = 6e-24, Method: Composition-based stats. Identities = 56/98 (57%), Positives = 70/98 (71%) Query: 1 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG 60 MKDVVDKCSTKGCAID+GT+IDN++C + + F +REEAES + ++E AAA + A E Sbjct: 1 MKDVVDKCSTKGCAIDVGTIIDNEDCVYRAEKVFPSREEAESTVAAVRERAAAAAPASEP 60 Query: 61 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSL 98 V Y I V+LD + FSCQAE IIFELSLR+L Sbjct: 61 PQVDYTIVAAGDAVKLDLSIAFSCQAEKIIFELSLRNL 98 >UniRef50_Q7VKK6 Putative uncharacterized protein n=5 Tax=Pasteurellaceae RepID=Q7VKK6_HAEDU Length = 138 Score = 109 bits (272), Expect = 3e-23, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 3/88 (3%) Query: 12 GC-AIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDL 70 GC D+G++IDN +KF + +AT+E+AE+ + KL + A T + + ++ I + Sbjct: 53 GCNTFDVGSIIDNSERDAKFEKVYATQEQAEAVLAKLVQKARDTET--DSCEISSNILPV 110 Query: 71 EGQVELDAAFTFSCQAEMIIFELSLRSL 98 E L A F FSCQAE++IF+L R+ Sbjct: 111 EAGFLLTANFDFSCQAEVVIFQLGTRAF 138 >UniRef50_P0AD34 UPF0381 protein yfcZ n=137 Tax=Enterobacteriaceae RepID=YFCZ_ECOL6 Length = 94 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 2/84 (2%) Query: 13 CAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEG 72 C +D+GT++DN +CT+ +SR FA R EAE + L E A + S E + + Sbjct: 13 CCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVES--EPCKITPTFTEESD 70 Query: 73 QVELDAAFTFSCQAEMIIFELSLR 96 V LD FTF+C+AEM+IF+L LR Sbjct: 71 GVRLDIDFTFACEAEMLIFQLGLR 94 >UniRef50_A8ADP0 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A8ADP0_CITK8 Length = 80 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 2/82 (2%) Query: 15 IDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEGQV 74 +D+GT++DN +CT+ +SR F R +AE + L E A S E + + V Sbjct: 1 MDVGTIMDNSDCTASYSRVFENRAQAEETLAALTEKARGVES--EPCQITSTFTEEAEGV 58 Query: 75 ELDAAFTFSCQAEMIIFELSLR 96 LD F F+C+AE +IF+L LR Sbjct: 59 RLDIDFVFACEAETLIFQLGLR 80 >UniRef50_C6AKB2 DNA mismatch repair protein n=10 Tax=Gammaproteobacteria RepID=C6AKB2_AGGAN Length = 96 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%) Query: 13 CAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEG 72 C +D+GTVID +CT F + +AT E A+ + L E A A S + + I +E Sbjct: 15 CCVDVGTVIDGSDCTIDFEQVYATEELAKEALNYLTEKAKAAES--DPCHITSDISAVEN 72 Query: 73 QVELDAAFTFSCQAEMIIFELSLR 96 +L A F FSCQAE +IF+LS R Sbjct: 73 GYKLKAQFEFSCQAESMIFQLSTR 96 >UniRef50_B8F341 Possible DNA mismatch repair protein n=2 Tax=Haemophilus parasuis RepID=B8F341_HAEPS Length = 91 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 2/82 (2%) Query: 15 IDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEGQV 74 ID+GT+IDN +C F++ + T+ EAE + L A AT S E ++ +I E Sbjct: 12 IDVGTIIDNSDCAVNFTQLYTTKAEAEDALAFLTSKARATES--EPCEISSEIISTENGF 69 Query: 75 ELDAAFTFSCQAEMIIFELSLR 96 +L A F FS Q E +IFEL +R Sbjct: 70 QLTACFKFSYQVESMIFELGIR 91 >UniRef50_P44686 UPF0381 protein HI0400 n=31 Tax=Gammaproteobacteria RepID=Y400_HAEIN Length = 95 Score = 99.0 bits (245), Expect = 4e-20, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 2/83 (2%) Query: 14 AIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEGQ 73 +D+GT+ID +C+ + +F++T +A + + +L + A T S + + +I +E Sbjct: 15 CVDVGTIIDGSDCSVEVHQFYSTEADANAVLERLTKKARNTES--DPCEIKSEIVAVENG 72 Query: 74 VELDAAFTFSCQAEMIIFELSLR 96 V+L+A+FTFSCQAE +IFEL+ R Sbjct: 73 VQLNASFTFSCQAEAMIFELANR 95 >UniRef50_P44027 UPF0381 protein HI0636 n=26 Tax=Pasteurellaceae RepID=Y636_HAEIN Length = 96 Score = 77.0 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 3/83 (3%) Query: 12 GC-AIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDL 70 GC D+ ++ DN +C+ + + +A+ + + A S E + +I + Sbjct: 13 GCNTFDMKSLFDNRDCSQVIEYIYDSEGQAQEALAFFTQKARDVES--EPCEIQSEITKV 70 Query: 71 EGQVELDAAFTFSCQAEMIIFEL 93 + L A FTF CQAE++IF++ Sbjct: 71 DDGYLLKADFTFCCQAELVIFQM 93 >UniRef50_B8F3Q3 tRNA-dihydrouridine synthase A n=2 Tax=Haemophilus parasuis RepID=B8F3Q3_HAEPS Length = 97 Score = 77.0 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 8 CSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKI 67 C C ++ DN + T + + + T+ +AE + L A S E +++ +I Sbjct: 11 CCGGICKPSSTSMFDNADSTIELALVYPTQADAEQGLATLTAKAREVES--EPCNISSQI 68 Query: 68 KDLEGQVELDAAFTFSCQAEMIIFELSLR 96 +E L A F FSCQAE +IF++ LR Sbjct: 69 SQIEDGFLLQAKFLFSCQAEAVIFQMKLR 97 >UniRef50_B0UTX1 Putative uncharacterized protein n=9 Tax=Pasteurellaceae RepID=B0UTX1_HAES2 Length = 98 Score = 62.8 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Query: 13 CAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEG 72 C I +++DN F + T ++A + + A ++ A++ +I D+ Sbjct: 17 CRIKGDSMLDNSAREVVFEAEYDTEKQALNARDYFIQKARDIE--NDPANIESQITDISN 74 Query: 73 QVELDAAFTFSCQAEMIIFELSLR 96 L F CQAE+++F++++R Sbjct: 75 GFRLKMRIVFGCQAEVVLFQMAIR 98 >UniRef50_C4L7R4 Putative uncharacterized protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7R4_TOLAT Length = 99 Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Query: 1 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG 60 M++V + C GC ++GT+I + + E+A + + +A Sbjct: 7 MEEVCEAC---GCVAEVGTIIRDGDDLVMIPVEGDNEEDARARQERYIAVAKEACPDV-- 61 Query: 61 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLR 96 V+ +++ +E V L+ F+C AE +IFE+ R Sbjct: 62 -LVSSELQTVEDGVVLNTTLQFTCTAEKMIFEMRAR 96 >UniRef50_Q7MFA3 Uncharacterized protein conserved in bacteria n=57 Tax=Vibrionales RepID=Q7MFA3_VIBVY Length = 99 Score = 42.7 bits (99), Expect = 0.003, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 4/92 (4%) Query: 8 CSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKI 67 C GCA +IG +I + + + + ++E ++ K ELA A + E Sbjct: 11 CEACGCAGEIGFIIKEGDDVADVTIYAGSKELLQAEFAKYLELAKAVNENVE----YNTT 66 Query: 68 KDLEGQVELDAAFTFSCQAEMIIFELSLRSLA 99 + EL A F F AE +IFEL RSL+ Sbjct: 67 DLTDDSTELTARFKFEVSAEKLIFELKSRSLS 98 >UniRef50_A0KF70 Putative uncharacterized protein n=2 Tax=Aeromonas RepID=A0KF70_AERHH Length = 100 Score = 42.0 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%) Query: 6 DKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAY 65 + C + GC +IGT+I + + A +A + + + LA ++ + Sbjct: 11 ETCDSCGCFAEIGTIIGEGDDVMELVIEAAAEADARAKLAAYEALAKQVTAEATS---SS 67 Query: 66 KIKDLEGQVELDAAFTFSCQAEMIIFELSLRSL 98 ++ V L A F+C AE +IFE+ RS+ Sbjct: 68 ELSQGANGVILKARLQFTCTAEKLIFEMRARSI 100 >UniRef50_A1STA8 Putative uncharacterized protein n=2 Tax=Psychromonas RepID=A1STA8_PSYIN Length = 98 Score = 39.3 bits (90), Expect = 0.035, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 3/97 (3%) Query: 2 KDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGA 61 K+ D C G +++G+VI +D+ T +E+ + + A + + Sbjct: 5 KNADDICEACGSFVELGSVISDDDTVLVLP---FTGKESVAVTALAIKYIDAAKTRFDSV 61 Query: 62 SVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSL 98 V + + V L+ F F C AE +IFE+ L ++ Sbjct: 62 VVTEQEITADDLVTLEVTFNFDCTAEKLIFEMGLSAI 98 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D0Z807 Putative uncharacterized protein n=2 Tax=Edwards... 122 2e-27 UniRef50_P32162 UPF0381 protein yiiS n=61 Tax=Enterobacteriaceae... 114 7e-25 UniRef50_Q7VKK6 Putative uncharacterized protein n=5 Tax=Pasteur... 105 4e-22 UniRef50_C4X908 Putative uncharacterized protein n=5 Tax=Klebsie... 101 1e-20 UniRef50_B8F3Q3 tRNA-dihydrouridine synthase A n=2 Tax=Haemophil... 100 2e-20 UniRef50_P0AD34 UPF0381 protein yfcZ n=137 Tax=Enterobacteriacea... 98 7e-20 UniRef50_C6AKB2 DNA mismatch repair protein n=10 Tax=Gammaproteo... 98 9e-20 UniRef50_B8F341 Possible DNA mismatch repair protein n=2 Tax=Hae... 97 1e-19 UniRef50_P44686 UPF0381 protein HI0400 n=31 Tax=Gammaproteobacte... 95 8e-19 UniRef50_A8ADP0 Putative uncharacterized protein n=2 Tax=Enterob... 94 1e-18 UniRef50_P44027 UPF0381 protein HI0636 n=26 Tax=Pasteurellaceae ... 93 3e-18 UniRef50_B0UTX1 Putative uncharacterized protein n=9 Tax=Pasteur... 92 4e-18 UniRef50_C4L7R4 Putative uncharacterized protein n=1 Tax=Tolumon... 87 1e-16 Sequences not found previously or not previously below threshold: UniRef50_A0KF70 Putative uncharacterized protein n=2 Tax=Aeromon... 55 5e-07 UniRef50_Q7MFA3 Uncharacterized protein conserved in bacteria n=... 48 1e-04 UniRef50_A1STA8 Putative uncharacterized protein n=2 Tax=Psychro... 45 9e-04 UniRef50_Q2C8E1 Putative uncharacterized protein n=2 Tax=Vibrion... 44 0.001 UniRef50_A6FGT2 Putative uncharacterized protein n=1 Tax=Moritel... 42 0.006 >UniRef50_D0Z807 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=D0Z807_EDWTE Length = 98 Score = 122 bits (307), Expect = 2e-27, Method: Composition-based stats. Identities = 50/97 (51%), Positives = 68/97 (70%) Query: 1 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG 60 MKDVVDKCS KGCAIDIG+V+DNDNCT+ ++ +A+R+EAE + +L A + + Sbjct: 1 MKDVVDKCSNKGCAIDIGSVLDNDNCTTVITQAYASRDEAEKQLAQLTAKAQRVAQQEYP 60 Query: 61 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRS 97 + + I + EG+ L+A F FSCQAE +IFELSLR Sbjct: 61 CIITHDISEKEGEFVLNAHFNFSCQAETVIFELSLRH 97 >UniRef50_P32162 UPF0381 protein yiiS n=61 Tax=Enterobacteriaceae RepID=YIIS_ECOLI Length = 99 Score = 114 bits (286), Expect = 7e-25, Method: Composition-based stats. Identities = 99/99 (100%), Positives = 99/99 (100%) Query: 1 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG 60 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG Sbjct: 1 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG 60 Query: 61 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA 99 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA Sbjct: 61 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA 99 >UniRef50_Q7VKK6 Putative uncharacterized protein n=5 Tax=Pasteurellaceae RepID=Q7VKK6_HAEDU Length = 138 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 3/88 (3%) Query: 12 GC-AIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDL 70 GC D+G++IDN +KF + +AT+E+AE+ + KL + A T + + ++ I + Sbjct: 53 GCNTFDVGSIIDNSERDAKFEKVYATQEQAEAVLAKLVQKARDTET--DSCEISSNILPV 110 Query: 71 EGQVELDAAFTFSCQAEMIIFELSLRSL 98 E L A F FSCQAE++IF+L R+ Sbjct: 111 EAGFLLTANFDFSCQAEVVIFQLGTRAF 138 >UniRef50_C4X908 Putative uncharacterized protein n=5 Tax=Klebsiella RepID=C4X908_KLEPN Length = 99 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 56/98 (57%), Positives = 70/98 (71%) Query: 1 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG 60 MKDVVDKCSTKGCAID+GT+IDN++C + + F +REEAES + ++E AAA + A E Sbjct: 1 MKDVVDKCSTKGCAIDVGTIIDNEDCVYRAEKVFPSREEAESTVAAVRERAAAAAPASEP 60 Query: 61 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSL 98 V Y I V+LD + FSCQAE IIFELSLR+L Sbjct: 61 PQVDYTIVAAGDAVKLDLSIAFSCQAEKIIFELSLRNL 98 >UniRef50_B8F3Q3 tRNA-dihydrouridine synthase A n=2 Tax=Haemophilus parasuis RepID=B8F3Q3_HAEPS Length = 97 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 8 CSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKI 67 C C ++ DN + T + + + T+ +AE + L A S E +++ +I Sbjct: 11 CCGGICKPSSTSMFDNADSTIELALVYPTQADAEQGLATLTAKAREVES--EPCNISSQI 68 Query: 68 KDLEGQVELDAAFTFSCQAEMIIFELSLR 96 +E L A F FSCQAE +IF++ LR Sbjct: 69 SQIEDGFLLQAKFLFSCQAEAVIFQMKLR 97 >UniRef50_P0AD34 UPF0381 protein yfcZ n=137 Tax=Enterobacteriaceae RepID=YFCZ_ECOL6 Length = 94 Score = 98.2 bits (243), Expect = 7e-20, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 2/84 (2%) Query: 13 CAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEG 72 C +D+GT++DN +CT+ +SR FA R EAE + L E A + S E + + Sbjct: 13 CCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVES--EPCKITPTFTEESD 70 Query: 73 QVELDAAFTFSCQAEMIIFELSLR 96 V LD FTF+C+AEM+IF+L LR Sbjct: 71 GVRLDIDFTFACEAEMLIFQLGLR 94 >UniRef50_C6AKB2 DNA mismatch repair protein n=10 Tax=Gammaproteobacteria RepID=C6AKB2_AGGAN Length = 96 Score = 97.8 bits (242), Expect = 9e-20, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%) Query: 13 CAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEG 72 C +D+GTVID +CT F + +AT E A+ + L E A A S + + I +E Sbjct: 15 CCVDVGTVIDGSDCTIDFEQVYATEELAKEALNYLTEKAKAAES--DPCHITSDISAVEN 72 Query: 73 QVELDAAFTFSCQAEMIIFELSLR 96 +L A F FSCQAE +IF+LS R Sbjct: 73 GYKLKAQFEFSCQAESMIFQLSTR 96 >UniRef50_B8F341 Possible DNA mismatch repair protein n=2 Tax=Haemophilus parasuis RepID=B8F341_HAEPS Length = 91 Score = 97.4 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 2/82 (2%) Query: 15 IDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEGQV 74 ID+GT+IDN +C F++ + T+ EAE + L A AT S E ++ +I E Sbjct: 12 IDVGTIIDNSDCAVNFTQLYTTKAEAEDALAFLTSKARATES--EPCEISSEIISTENGF 69 Query: 75 ELDAAFTFSCQAEMIIFELSLR 96 +L A F FS Q E +IFEL +R Sbjct: 70 QLTACFKFSYQVESMIFELGIR 91 >UniRef50_P44686 UPF0381 protein HI0400 n=31 Tax=Gammaproteobacteria RepID=Y400_HAEIN Length = 95 Score = 94.7 bits (234), Expect = 8e-19, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 2/83 (2%) Query: 14 AIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEGQ 73 +D+GT+ID +C+ + +F++T +A + + +L + A T S + + +I +E Sbjct: 15 CVDVGTIIDGSDCSVEVHQFYSTEADANAVLERLTKKARNTES--DPCEIKSEIVAVENG 72 Query: 74 VELDAAFTFSCQAEMIIFELSLR 96 V+L+A+FTFSCQAE +IFEL+ R Sbjct: 73 VQLNASFTFSCQAEAMIFELANR 95 >UniRef50_A8ADP0 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A8ADP0_CITK8 Length = 80 Score = 94.3 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 2/82 (2%) Query: 15 IDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEGQV 74 +D+GT++DN +CT+ +SR F R +AE + L E A S E + + V Sbjct: 1 MDVGTIMDNSDCTASYSRVFENRAQAEETLAALTEKARGVES--EPCQITSTFTEEAEGV 58 Query: 75 ELDAAFTFSCQAEMIIFELSLR 96 LD F F+C+AE +IF+L LR Sbjct: 59 RLDIDFVFACEAETLIFQLGLR 80 >UniRef50_P44027 UPF0381 protein HI0636 n=26 Tax=Pasteurellaceae RepID=Y636_HAEIN Length = 96 Score = 92.8 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Query: 12 GC-AIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDL 70 GC D+ ++ DN +C+ + + +A+ + + A S E + +I + Sbjct: 13 GCNTFDMKSLFDNRDCSQVIEYIYDSEGQAQEALAFFTQKARDVES--EPCEIQSEITKV 70 Query: 71 EGQVELDAAFTFSCQAEMIIFELSL 95 + L A FTF CQAE++IF++ + Sbjct: 71 DDGYLLKADFTFCCQAELVIFQMRI 95 >UniRef50_B0UTX1 Putative uncharacterized protein n=9 Tax=Pasteurellaceae RepID=B0UTX1_HAES2 Length = 98 Score = 92.0 bits (227), Expect = 4e-18, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Query: 13 CAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEG 72 C I +++DN F + T ++A + + A ++ A++ +I D+ Sbjct: 17 CRIKGDSMLDNSAREVVFEAEYDTEKQALNARDYFIQKARDIE--NDPANIESQITDISN 74 Query: 73 QVELDAAFTFSCQAEMIIFELSLR 96 L F CQAE+++F++++R Sbjct: 75 GFRLKMRIVFGCQAEVVLFQMAIR 98 >UniRef50_C4L7R4 Putative uncharacterized protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7R4_TOLAT Length = 99 Score = 87.4 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Query: 1 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG 60 M++V + C GC ++GT+I + + E+A + + +A Sbjct: 7 MEEVCEAC---GCVAEVGTIIRDGDDLVMIPVEGDNEEDARARQERYIAVAKEACPDV-- 61 Query: 61 ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLR 96 V+ +++ +E V L+ F+C AE +IFE+ R Sbjct: 62 -LVSSELQTVEDGVVLNTTLQFTCTAEKMIFEMRAR 96 >UniRef50_A0KF70 Putative uncharacterized protein n=2 Tax=Aeromonas RepID=A0KF70_AERHH Length = 100 Score = 55.4 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 3/96 (3%) Query: 3 DVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGAS 62 ++ + C + GC +IGT+I + + A +A + + + LA ++ Sbjct: 8 ELNETCDSCGCFAEIGTIIGEGDDVMELVIEAAAEADARAKLAAYEALAKQVTAEATS-- 65 Query: 63 VAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSL 98 + ++ V L A F+C AE +IFE+ RS+ Sbjct: 66 -SSELSQGANGVILKARLQFTCTAEKLIFEMRARSI 100 >UniRef50_Q7MFA3 Uncharacterized protein conserved in bacteria n=57 Tax=Vibrionales RepID=Q7MFA3_VIBVY Length = 99 Score = 47.7 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%) Query: 3 DVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGAS 62 V + C GCA +IG +I + + + + ++E ++ K ELA A + + Sbjct: 9 QVCEAC---GCAGEIGFIIKEGDDVADVTIYAGSKELLQAEFAKYLELAKAVNE-----N 60 Query: 63 VAYKIKDL-EGQVELDAAFTFSCQAEMIIFELSLRSLA 99 V Y DL + EL A F F AE +IFEL RSL+ Sbjct: 61 VEYNTTDLTDDSTELTARFKFEVSAEKLIFELKSRSLS 98 >UniRef50_A1STA8 Putative uncharacterized protein n=2 Tax=Psychromonas RepID=A1STA8_PSYIN Length = 98 Score = 44.7 bits (104), Expect = 9e-04, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Query: 2 KDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGA 61 D+ + C G +++G+VI +D+ T +E+ + + A + + Sbjct: 8 DDICEAC---GSFVELGSVISDDDTVLVLPF---TGKESVAVTALAIKYIDAAKTRFDSV 61 Query: 62 SVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSL 98 V + + V L+ F F C AE +IFE+ L ++ Sbjct: 62 VVTEQEITADDLVTLEVTFNFDCTAEKLIFEMGLSAI 98 >UniRef50_Q2C8E1 Putative uncharacterized protein n=2 Tax=Vibrionaceae RepID=Q2C8E1_9GAMM Length = 99 Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 9/98 (9%) Query: 3 DVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGAS 62 V D C G + ++G +I ++ T+ F ++ E ++ LA + A+ Sbjct: 9 QVCDAC---GVSAEMGFIIKENDDTADVKVFANGKDALEIELSNYLALAKEVN-----AN 60 Query: 63 VAYKIKDL-EGQVELDAAFTFSCQAEMIIFELSLRSLA 99 + + EL A F C AE +IFEL RSLA Sbjct: 61 YKVETTPVNADSTELTARIQFECSAEKLIFELRSRSLA 98 >UniRef50_A6FGT2 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FGT2_9GAMM Length = 97 Score = 42.0 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 14/99 (14%) Query: 3 DVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATR---EEAESFMTKLKELAAATSSADE 59 D+ D C G +IG++I D+ F F ++ +E S + E DE Sbjct: 8 DIKDCC---GAFAEIGSIIHPDDTELSFPISFDSQLAVDEKRSELEAYVE-----EQFDE 59 Query: 60 GASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSL 98 ++ + +D + +F+C AE +IFE++LR L Sbjct: 60 AVTINFTAQDEHTYLV---TLSFTCTAEKMIFEMNLRHL 95 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.135 0.374 Lambda K H 0.267 0.0413 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 466,483,796 Number of Sequences: 3077464 Number of extensions: 12632754 Number of successful extensions: 46877 Number of sequences better than 1.0e-01: 21 Number of HSP's better than 0.1 without gapping: 39 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 46798 Number of HSP's gapped (non-prelim): 57 length of query: 99 length of database: 1,040,396,356 effective HSP length: 68 effective length of query: 31 effective length of database: 831,128,804 effective search space: 25764992924 effective search space used: 25764992924 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 87 (38.1 bits)