BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (296 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P31129 Uncharacterized protein ydeH n=55 Tax=Enterobact... 616 e-175 UniRef50_B1ELX2 Diguanylate cyclase (GGDEF) domain protein n=3 T... 561 e-158 UniRef50_A4W9G8 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638... 233 6e-60 UniRef50_C9XU93 Putative uncharacterized protein n=1 Tax=Cronoba... 189 7e-47 UniRef50_C8Q5F4 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 166 8e-40 UniRef50_A7MIT6 Putative uncharacterized protein n=1 Tax=Cronoba... 155 1e-36 UniRef50_Q0EXC9 Signaling protein with a GGDEF domain n=1 Tax=Ma... 122 2e-26 UniRef50_Q2BP87 Methyl-accepting chemotaxis protein-like n=1 Tax... 118 3e-25 UniRef50_C0QQG6 Signal transduction response regulator n=1 Tax=P... 117 3e-25 UniRef50_A4U5Q6 GGDEF domain protein n=2 Tax=Magnetospirillum Re... 117 5e-25 UniRef50_B7RWB9 GGDEF domain protein n=2 Tax=unclassified Gammap... 115 2e-24 UniRef50_Q1GXA8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Methy... 115 2e-24 UniRef50_B9QZJ3 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 114 6e-24 UniRef50_A8UZ69 Putative uncharacterized protein n=1 Tax=Hydroge... 114 6e-24 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 113 7e-24 UniRef50_C5UZW0 Diguanylate cyclase n=2 Tax=Gallionellaceae RepI... 112 1e-23 UniRef50_C4XNA6 Response regulator receiver protein n=2 Tax=Desu... 112 2e-23 UniRef50_A4A4X4 GGDEF family protein n=1 Tax=Congregibacter lito... 112 2e-23 UniRef50_C2L1F7 Possible diguanylate cyclase n=1 Tax=Oribacteriu... 111 3e-23 UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 110 4e-23 UniRef50_A8TN49 Putative uncharacterized protein n=1 Tax=alpha p... 110 5e-23 UniRef50_B8GTD8 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 110 5e-23 UniRef50_Q73RG3 GGDEF domain protein n=1 Tax=Treponema denticola... 110 6e-23 UniRef50_C7R6M6 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 110 6e-23 UniRef50_C1DTK4 Signal transduction response regulator n=1 Tax=S... 110 7e-23 UniRef50_A5G157 Diguanylate cyclase n=1 Tax=Acidiphilium cryptum... 110 8e-23 UniRef50_A6VSB0 Diguanylate cyclase n=2 Tax=Gammaproteobacteria ... 110 9e-23 UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=N... 110 9e-23 UniRef50_Q2BRK2 Signaling protein with a GGDEF domain n=1 Tax=Ne... 109 1e-22 UniRef50_C6BU46 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 109 1e-22 UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliob... 109 1e-22 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 109 1e-22 UniRef50_B2JTM3 Diguanylate cyclase n=3 Tax=Burkholderia RepID=B... 108 1e-22 UniRef50_A8ESJ8 GGDEF domain protein n=1 Tax=Arcobacter butzleri... 108 2e-22 UniRef50_B1KP16 Diguanylate cyclase n=6 Tax=Proteobacteria RepID... 108 2e-22 UniRef50_Q15PX0 Diguanylate cyclase n=1 Tax=Pseudoalteromonas at... 108 2e-22 UniRef50_B7KC88 Diguanylate cyclase with Chase2 sensor n=2 Tax=C... 108 2e-22 UniRef50_B6JJ79 Putative diguanylate cyclase n=3 Tax=Bradyrhizob... 108 2e-22 UniRef50_Q2Y8W7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Nitro... 108 2e-22 UniRef50_D0I2V0 GGDEF family protein n=1 Tax=Grimontia hollisae ... 108 3e-22 UniRef50_C9RM68 Diguanylate cyclase n=1 Tax=Fibrobacter succinog... 108 3e-22 UniRef50_A3YI97 Sensory transduction/ GGDEF family protein n=1 T... 108 3e-22 UniRef50_B1KK06 7TM domain sensor diguanylate cyclase n=1 Tax=Sh... 108 3e-22 UniRef50_Q3A2B9 Response regulator/FOG:GGDEF domain protein n=1 ... 107 4e-22 UniRef50_Q3A1I1 GGDEF domain containing protein n=1 Tax=Pelobact... 107 4e-22 UniRef50_Q30R33 Diguanylate cyclase (GGDEF domain) n=2 Tax=Campy... 107 4e-22 UniRef50_Q6MN29 GGDEF domain protein n=1 Tax=Bdellovibrio bacter... 107 5e-22 UniRef50_Q3SJD4 Putative diguanylate cyclase (GGDEF domain) n=1 ... 107 5e-22 UniRef50_A4XPL1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 107 5e-22 UniRef50_B2I0B8 GGDEF domain protein n=11 Tax=Acinetobacter RepI... 107 6e-22 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 107 6e-22 UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 107 6e-22 UniRef50_B2S4L8 Possible sensory transduction histidine kinase n... 107 7e-22 UniRef50_A4BD76 GGDEF domain protein n=1 Tax=Reinekea blandensis... 107 7e-22 UniRef50_C7HZA2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 107 7e-22 UniRef50_Q31IH0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 106 8e-22 UniRef50_C0N2C8 GGDEF domain protein n=1 Tax=Methylophaga thioox... 106 9e-22 UniRef50_A0YDH5 Response regulator protein with GGDEF domain n=1... 106 1e-21 UniRef50_A8UWW7 Putative uncharacterized protein n=1 Tax=Hydroge... 106 1e-21 UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfo... 106 1e-21 UniRef50_B6BNQ1 Diguanylate cyclase n=2 Tax=cellular organisms R... 106 1e-21 UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 106 1e-21 UniRef50_C6MBI8 Diguanylate cyclase with GAF sensor n=1 Tax=Nitr... 106 1e-21 UniRef50_B8GME9 Putative diguanylate cyclase n=1 Tax=Thioalkaliv... 105 1e-21 UniRef50_Q7MF60 GGDEF family protein n=69 Tax=Gammaproteobacteri... 105 2e-21 UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 105 2e-21 UniRef50_B2J875 Diguanylate cyclase n=4 Tax=Cyanobacteria RepID=... 105 2e-21 UniRef50_A8FU11 Diguanylate cyclase n=9 Tax=Shewanella RepID=A8F... 105 2e-21 UniRef50_Q1PXD5 Putative uncharacterized protein n=1 Tax=Candida... 105 2e-21 UniRef50_UPI0001B9EDE1 diguanylate cyclase with PAS/PAC sensor n... 105 2e-21 UniRef50_B8FL29 Response regulator receiver modulated diguanylat... 105 2e-21 UniRef50_Q1K364 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 105 2e-21 UniRef50_Q30UV1 Diguanylate cyclase n=1 Tax=Desulfovibrio desulf... 105 2e-21 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 105 2e-21 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 105 2e-21 UniRef50_Q1ZGY5 GGDEF domain protein n=1 Tax=Psychromonas sp. CN... 105 2e-21 UniRef50_Q5QV80 Intracellular signaling protein (PAS,GAF,GGDEF d... 105 2e-21 UniRef50_C0QSI7 Diguanylate cyclase with GAF sensor n=1 Tax=Pers... 105 2e-21 UniRef50_Q21GT7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 105 2e-21 UniRef50_A4A6D3 Membrane protein containing GGDEF domain n=1 Tax... 105 2e-21 UniRef50_C4KD29 Response regulator receiver modulated diguanylat... 105 3e-21 UniRef50_B3E5L5 Response regulator receiver modulated diguanylat... 104 3e-21 UniRef50_A6FEG5 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 104 3e-21 UniRef50_A6DD54 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 104 3e-21 UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7... 104 3e-21 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 104 3e-21 UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Breviba... 104 3e-21 UniRef50_A0LIF2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 104 3e-21 UniRef50_Q5ZXI7 GGDEF domain protein n=4 Tax=Legionella pneumoph... 104 4e-21 UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum... 104 4e-21 UniRef50_B3QH74 Diguanylate cyclase n=14 Tax=Bradyrhizobiaceae R... 104 4e-21 UniRef50_B1Z7A7 Diguanylate cyclase n=1 Tax=Methylobacterium pop... 104 4e-21 UniRef50_Q65IC8 GGDEF-domain containing protein n=1 Tax=Bacillus... 104 4e-21 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 104 4e-21 UniRef50_B8KHV5 Ggdef domain protein n=1 Tax=gamma proteobacteri... 104 4e-21 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 104 5e-21 UniRef50_B5EIX9 Diguanylate cyclase n=2 Tax=Geobacter RepID=B5EI... 104 5e-21 UniRef50_A6Q580 Putative uncharacterized protein n=1 Tax=Nitrati... 104 5e-21 UniRef50_A4VQF4 GGDEF domain protein n=3 Tax=Proteobacteria RepI... 103 5e-21 UniRef50_B9TK28 Putative uncharacterized protein n=1 Tax=Ricinus... 103 5e-21 UniRef50_Q2RLY1 Diguanylate cyclase (GGDEF domain) n=1 Tax=Moore... 103 5e-21 UniRef50_Q47HY8 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 103 5e-21 UniRef50_A2PB03 Chemotaxis protein n=2 Tax=Vibrio cholerae RepID... 103 6e-21 UniRef50_Q1H013 Diguanylate cyclase (GGDEF domain) n=2 Tax=Methy... 103 6e-21 UniRef50_A1TX96 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 103 6e-21 UniRef50_Q1N6U5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 103 6e-21 UniRef50_A8FZW4 Sensory transduction system, regulatory protein ... 103 6e-21 UniRef50_A1K902 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 R... 103 6e-21 UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 103 6e-21 UniRef50_B4SPL2 Diguanylate cyclase n=3 Tax=Stenotrophomonas Rep... 103 7e-21 UniRef50_Q12JJ7 GGDEF domain n=1 Tax=Shewanella denitrificans OS... 103 7e-21 UniRef50_B1ZIK5 Diguanylate cyclase n=5 Tax=Methylobacterium Rep... 103 8e-21 UniRef50_B9Z7N2 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 103 8e-21 UniRef50_C0N2Q7 GGDEF domain protein n=1 Tax=Methylophaga thioox... 103 8e-21 UniRef50_A8FVJ0 Sensory box/GGDEF domain protein n=2 Tax=Shewane... 103 8e-21 UniRef50_UPI00018273A4 hypothetical protein EcanA3_10568 n=1 Tax... 103 8e-21 UniRef50_C1SHV7 Diguanylate cyclase (GGDEF) domain-containing pr... 103 9e-21 UniRef50_B1Y8B1 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii... 103 9e-21 UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein... 103 9e-21 UniRef50_A9HIT0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 103 9e-21 UniRef50_Q6MPU8 GGDEF domain protein n=1 Tax=Bdellovibrio bacter... 103 1e-20 UniRef50_C4KBG4 Diguanylate cyclase n=1 Tax=Thauera sp. MZ1T Rep... 103 1e-20 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 102 1e-20 UniRef50_Q30NZ2 Diguanylate cyclase (GGDEF domain) n=2 Tax=Campy... 102 1e-20 UniRef50_B6BKB0 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 102 1e-20 UniRef50_B9QXQ9 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 102 1e-20 UniRef50_C0QDC5 Signal transduction family protein (GGDEF domain... 102 1e-20 UniRef50_A6LUB1 Diguanylate cyclase n=1 Tax=Clostridium beijerin... 102 1e-20 UniRef50_C0Z4E1 Putative uncharacterized protein n=1 Tax=Breviba... 102 1e-20 UniRef50_D0KW78 Diguanylate cyclase n=1 Tax=Halothiobacillus nea... 102 1e-20 UniRef50_A6VYW5 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL... 102 1e-20 UniRef50_A1S6F8 Diguanylate cyclase n=2 Tax=Shewanella RepID=A1S... 102 1e-20 UniRef50_A8GJ51 Diguanylate cyclase n=1 Tax=Serratia proteamacul... 102 1e-20 UniRef50_B2TQF1 Ggdef domain protein n=3 Tax=Clostridium botulin... 102 1e-20 UniRef50_Q3ICC3 Putative uncharacterized protein n=2 Tax=Alterom... 102 2e-20 UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzer... 102 2e-20 UniRef50_A4G283 Putative uncharacterized protein n=1 Tax=Hermini... 102 2e-20 UniRef50_B2UHC7 Diguanylate cyclase n=2 Tax=Ralstonia pickettii ... 102 2e-20 UniRef50_D0KF92 Diguanylate cyclase n=1 Tax=Pectobacterium wasab... 102 2e-20 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 102 2e-20 UniRef50_A6TMF8 Diguanylate cyclase n=1 Tax=Alkaliphilus metalli... 102 2e-20 UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alterom... 102 2e-20 UniRef50_B6BGM9 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 102 2e-20 UniRef50_C6XBE1 Diguanylate cyclase n=1 Tax=Methylovorus sp. SIP... 102 2e-20 UniRef50_A1SZ67 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 102 2e-20 UniRef50_Q089V9 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 102 2e-20 UniRef50_Q1RHW0 Regulatory components of sensory transduction sy... 102 2e-20 UniRef50_A8FRI3 Putative diguanylate cyclase (GGDEF domain) n=1 ... 102 2e-20 UniRef50_D2R0A0 Diguanylate cyclase n=1 Tax=Pirellula staleyi DS... 102 2e-20 UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 102 2e-20 UniRef50_C0QMB4 ABC-type nitrate/sulfonate/bicarbonate transport... 102 2e-20 UniRef50_C7LTV4 Response regulator receiver modulated diguanylat... 101 2e-20 UniRef50_A6DCT5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 101 2e-20 UniRef50_D1B7Z4 Sensor protein n=1 Tax=Thermanaerovibrio acidami... 101 2e-20 UniRef50_Q1GXZ8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Methy... 101 3e-20 UniRef50_O66623 Putative uncharacterized protein n=1 Tax=Aquifex... 101 3e-20 UniRef50_B9L7B2 Diguanylate cyclase (GGDEF) domain protein n=1 T... 101 3e-20 UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3... 101 3e-20 UniRef50_C1DVZ5 Ggdef domain protein n=1 Tax=Sulfurihydrogenibiu... 101 3e-20 UniRef50_B6BKQ4 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 101 3e-20 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 101 3e-20 UniRef50_A8IIA3 Putative uncharacterized protein n=2 Tax=Alphapr... 101 3e-20 UniRef50_D1AZZ8 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 101 3e-20 UniRef50_A8UWB7 Putative uncharacterized protein n=1 Tax=Hydroge... 101 3e-20 UniRef50_A1TZT5 Diguanylate cyclase n=3 Tax=Marinobacter RepID=A... 101 3e-20 UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 101 3e-20 UniRef50_D1RF31 Response regulator diguanylate cyclase (GGDEF) d... 101 3e-20 UniRef50_A8TQW5 GGDEF domain n=1 Tax=alpha proteobacterium BAL19... 101 3e-20 UniRef50_A3UJW0 Stalked-cell differentiation controlling protein... 101 3e-20 UniRef50_B8KV43 Sensory box histidine kinase n=1 Tax=gamma prote... 101 3e-20 UniRef50_A3JB69 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax... 101 3e-20 UniRef50_C7LSD5 Response regulator receiver modulated diguanylat... 101 3e-20 UniRef50_B3EB82 Response regulator receiver modulated diguanylat... 101 3e-20 UniRef50_B2UI26 Diguanylate cyclase with GAF sensor n=2 Tax=Rals... 101 4e-20 UniRef50_A4BAC3 Response regulator receiver domain protein (CheY... 101 4e-20 UniRef50_A0LD73 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC... 101 4e-20 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 101 4e-20 UniRef50_Q1LM75 Diguanylate cyclase (GGDEF domain) n=2 Tax=Cupri... 101 4e-20 UniRef50_C6BSU0 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 101 4e-20 UniRef50_B9L5U9 Inner membrane protein YcdT n=1 Tax=Nautilia pro... 101 4e-20 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 100 4e-20 UniRef50_Q47WC7 GGDEF domain protein n=1 Tax=Colwellia psychrery... 100 4e-20 UniRef50_C4KZ82 Diguanylate cyclase n=1 Tax=Exiguobacterium sp. ... 100 4e-20 UniRef50_C1TNZ5 Diguanylate cyclase (GGDEF) domain-containing pr... 100 4e-20 UniRef50_A6LZP4 Diguanylate cyclase n=1 Tax=Clostridium beijerin... 100 4e-20 UniRef50_Q7NQA3 Probable GGDEF family protein n=1 Tax=Chromobact... 100 4e-20 UniRef50_Q2BQN9 Diguanylate cyclase, putative n=1 Tax=Neptuniiba... 100 4e-20 UniRef50_C0QPX4 Signal transduction response regulator n=1 Tax=P... 100 4e-20 UniRef50_D2C2R9 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 100 4e-20 UniRef50_B3QHH6 Diguanylate cyclase n=3 Tax=Rhodopseudomonas pal... 100 5e-20 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 100 5e-20 UniRef50_B0KCF6 Diguanylate cyclase with GAF sensor n=12 Tax=The... 100 5e-20 UniRef50_C0N947 GGDEF domain protein n=1 Tax=Methylophaga thioox... 100 5e-20 UniRef50_Q2SD41 Response regulator containing a CheY-like receiv... 100 5e-20 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 100 5e-20 UniRef50_Q085X7 Diguanylate cyclase n=2 Tax=Alteromonadales RepI... 100 5e-20 UniRef50_B4WXS7 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG8... 100 5e-20 UniRef50_A8I9A7 Putative uncharacterized protein n=1 Tax=Azorhiz... 100 5e-20 UniRef50_Q0F2V6 GGDEF domain protein n=2 Tax=Proteobacteria RepI... 100 5e-20 UniRef50_A8ETV0 GGDEF domain protein n=1 Tax=Arcobacter butzleri... 100 5e-20 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 100 6e-20 UniRef50_Q2BI67 GGDEF protein n=1 Tax=Neptuniibacter caesariensi... 100 6e-20 UniRef50_C9YCE2 Putative uncharacterized protein n=1 Tax=Curviba... 100 6e-20 UniRef50_Q0TPG8 GGDEF domain protein n=10 Tax=Clostridium perfri... 100 6e-20 UniRef50_Q6WLF6 Putative uncharacterized protein n=1 Tax=uncultu... 100 6e-20 UniRef50_C9NRL0 Putative virulence-mediating protein VirC n=2 Ta... 100 6e-20 UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingo... 100 6e-20 UniRef50_C8QWN5 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 100 6e-20 UniRef50_Q31M78 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 100 6e-20 UniRef50_Q07ZF0 Diguanylate cyclase n=21 Tax=Shewanella RepID=Q0... 100 7e-20 UniRef50_C8VW84 Response regulator receiver modulated diguanylat... 100 7e-20 UniRef50_C1F117 Sensory box-containing diguanylate cyclase n=1 T... 100 7e-20 UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 T... 100 7e-20 UniRef50_A8EV18 GGDEF/PAS domain protein n=1 Tax=Arcobacter butz... 100 7e-20 UniRef50_Q31GR6 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 100 7e-20 UniRef50_Q4KKJ4 Diguanylate cyclase, putative n=5 Tax=Pseudomona... 100 7e-20 UniRef50_B1HWA5 Putative diguanylate cyclase (GGDEF domain) n=2 ... 100 7e-20 UniRef50_A6F6C4 GGDEF family protein n=1 Tax=Moritella sp. PE36 ... 100 7e-20 UniRef50_B1HZ30 Putative signaling membrane protein n=2 Tax=Baci... 100 8e-20 UniRef50_A6FDJ0 Putative uncharacterized protein n=1 Tax=Moritel... 100 8e-20 UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 100 8e-20 UniRef50_Q1JXL6 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 100 8e-20 UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 100 8e-20 UniRef50_B8FB82 Response regulator receiver modulated diguanylat... 100 9e-20 UniRef50_Q0G1R3 Periplasmic sensor diguanylate cyclase (GGDEF) n... 100 9e-20 UniRef50_Q223C6 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 100 9e-20 UniRef50_C5BK03 Ggdef domain protein n=1 Tax=Teredinibacter turn... 100 9e-20 UniRef50_UPI000185121C diguanylate cyclase n=1 Tax=Bacillus coah... 100 9e-20 UniRef50_Q0AG42 Diguanylate cyclase n=2 Tax=Nitrosomonas RepID=Q... 100 9e-20 UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Ma... 100 9e-20 UniRef50_Q7UXF6 Putative uncharacterized protein n=1 Tax=Rhodopi... 100 9e-20 UniRef50_B5ETB5 Sensory transduction protein kinase n=3 Tax=Alii... 100 9e-20 UniRef50_A4C484 Putative uncharacterized protein n=1 Tax=Pseudoa... 100 9e-20 UniRef50_A6Q9W1 Putative uncharacterized protein n=1 Tax=Sulfuro... 100 1e-19 UniRef50_Q2JJF5 Response regulator n=2 Tax=Synechococcus RepID=Q... 100 1e-19 UniRef50_Q24NT2 Putative uncharacterized protein n=2 Tax=Desulfi... 100 1e-19 UniRef50_B6JIE5 Cellulose synthesis regulatory protein n=1 Tax=O... 100 1e-19 UniRef50_B9QXS5 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 100 1e-19 UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curviba... 100 1e-19 UniRef50_B1I5R0 Response regulator receiver modulated diguanylat... 100 1e-19 UniRef50_A2SJS1 GGDEF domain containing protein n=1 Tax=Methylib... 100 1e-19 UniRef50_C4LEB0 Diguanylate cyclase with PAS/PAC and GAF sensors... 100 1e-19 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 100 1e-19 UniRef50_A6C9X3 GGDEF domain-like protein n=1 Tax=Planctomyces m... 100 1e-19 UniRef50_A8VS95 Response regulator receiver protein n=1 Tax=Baci... 100 1e-19 UniRef50_C4FJS9 Signal transduction response regulator n=1 Tax=S... 99 1e-19 UniRef50_Q31JG8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 99 1e-19 UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 99 1e-19 UniRef50_Q0VMI3 GGDEF domain protein n=1 Tax=Alcanivorax borkume... 99 1e-19 UniRef50_C6P797 Diguanylate cyclase/phosphodiesterase with PAS/P... 99 1e-19 >UniRef50_P31129 Uncharacterized protein ydeH n=55 Tax=Enterobacteriaceae RepID=YDEH_ECOLI Length = 296 Score = 616 bits (1589), Expect = e-175, Method: Compositional matrix adjust. Identities = 296/296 (100%), Positives = 296/296 (100%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH Sbjct: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY Sbjct: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI Sbjct: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH Sbjct: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV 296 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV Sbjct: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV 296 >UniRef50_B1ELX2 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Enterobacteriaceae RepID=B1ELX2_9ESCH Length = 296 Score = 561 bits (1445), Expect = e-158, Method: Compositional matrix adjust. Identities = 265/296 (89%), Positives = 284/296 (95%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 MIKKTTEIDAILL+LNKAIDAHYQWLV+MFHSVVARDASKPEITDNHS+GLCQFG+WI+H Sbjct: 1 MIKKTTEIDAILLDLNKAIDAHYQWLVNMFHSVVARDASKPEITDNHSHGLCQFGQWIEH 60 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 LGPLDNDELPYVRLM+SAHQHMH+CGRELMLAI+EN WQ+AHF FQEGLLSFTA LTDY Sbjct: 61 LGPLDNDELPYVRLMNSAHQHMHDCGRELMLAIIENRWQEAHFAKFQEGLLSFTATLTDY 120 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 KIYLLTIRSNMD+LTGLPGRRVLDESFD+QL NAEPL+LYLMLLDIDRFKLVNDTYGHL Sbjct: 121 KIYLLTIRSNMDILTGLPGRRVLDESFDYQLSNAEPLSLYLMLLDIDRFKLVNDTYGHLT 180 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GDVVLRTLAT LA+WTRDYETVYRYGGEEFIII+KA ND+EAC AGVRICQLVDNHAI H Sbjct: 181 GDVVLRTLATSLANWTRDYETVYRYGGEEFIIIIKAQNDDEACHAGVRICQLVDNHAIAH 240 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV 296 GHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI++Q+VI+RV Sbjct: 241 PGGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFINKQDVISRV 296 >UniRef50_A4W9G8 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638 RepID=A4W9G8_ENT38 Length = 298 Score = 233 bits (594), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 124/291 (42%), Positives = 187/291 (64%), Gaps = 2/291 (0%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 M K +IDA + +LN + DAH++WL+++ V +RD P++T + ++ C FG W++ Sbjct: 1 MNSKFKKIDATVRDLNHSTDAHFKWLINILRFVASRDVLLPDLTCDDAHNFCDFGHWLNT 60 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 D Y+ + H H+H REL+ AI + +A FD F+ LL+FTA+++ Y Sbjct: 61 QLQDDIAGRNYLLDIKDKHIHVHKMCRELIKAIEHDECNNAPFDDFETALLAFTASVSRY 120 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 K +LL +R++ D LTGLP RR+LDES+D + LYL+LLD+D FK +ND YGHLI Sbjct: 121 KAHLLQLRTSYDALTGLPLRRILDESYDSMNKALGDEGLYLLLLDVDHFKKINDNYGHLI 180 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VLR+LA L + R E+VYRYGGEEFII+++A +D EA A R+ ++++ + T Sbjct: 181 GDAVLRSLALNLENNIRRAESVYRYGGEEFIILLQAHSDREATEAAERLRRVIET-SETV 239 Query: 241 SEGH-INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 S GH + IT ++G++R E L V+ RAD A+Y+GKQ+GRN + I++ Sbjct: 240 SGGHRVKITFSSGLTRVHRGETLREVLERADVALYKGKQSGRNCTILINKS 290 >UniRef50_C9XU93 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XU93_CROTZ Length = 301 Score = 189 bits (481), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 106/280 (37%), Positives = 153/280 (54%) Query: 7 EIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDN 66 +ID L LN A+ HY+W V+ + S+ C+F +W+ + Sbjct: 11 QIDLSLKELNYAVKLHYEWTGKFLELVLLGNEPDNTFMHPQSHLYCRFCQWMTAHQNIAF 70 Query: 67 DELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLT 126 L + + + H+ MH+ R L+ AI N A A+ E F A++ DY+ L++ Sbjct: 71 RYLHFAKAISETHKAMHDKARYLINAIASNQVDSAALYAYHEAQQQFVASIDDYRQQLIS 130 Query: 127 IRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 +R+ D LTGLP R++L E F+ +A L+L+++DIDRFK VNDTYGH GD VLR Sbjct: 131 LRNRHDTLTGLPLRQLLYEDFEFLHAHAREQTLWLLIIDIDRFKKVNDTYGHNAGDDVLR 190 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 +A + R E VYR+GGEEFI ++++ EEA AGVR+C+ +T +N Sbjct: 191 EVAQRFKNEARCCEQVYRFGGEEFIALLESHTQEEAREAGVRLCRCPGQLPLTLDGETLN 250 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 +TVT G++ E L IGRAD AMY GK GRNRC+ Sbjct: 251 VTVTGGLTCVRRNETLHEAIGRADDAMYFGKNNGRNRCIL 290 >UniRef50_C8Q5F4 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8Q5F4_9ENTR Length = 299 Score = 166 bits (420), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 109/292 (37%), Positives = 154/292 (52%), Gaps = 10/292 (3%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 M + +I+ + +LN AI HY+W + + + D HS+G C FG+WID Sbjct: 1 MQRTIYDIEVDIASLNHAIKNHYEWSNRLLEISLFGGNFDKSLADPHSHGYCDFGKWIDA 60 Query: 61 L----GPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAA 116 + DND L R+ DS H MH+ RE++ AI N + + + + SF A Sbjct: 61 MLIKYNFNDNDLL---RISDS-HIKMHDAVREIITAINANSFTHPQLEEYFQKQKSFLDA 116 Query: 117 LTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDH-QLRNA-EPLNLYLMLLDIDRFKLVND 174 L YK LL RS+ D LT LP R L F+ Q R A LY+++LD+D FK VND Sbjct: 117 LDGYKTRLLASRSSYDALTELPMRSKLISDFERLQQRCALTEHTLYVIILDVDHFKTVND 176 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 YGH GD VL+ LA L R E YRYGGEEF+I+V+A + + R+ + + Sbjct: 177 QYGHNGGDTVLKGLAQLLLETMRKCEKCYRYGGEEFVILVEAPCLADIKKLVERLMKRMR 236 Query: 235 NHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 N ++ IN+T T GV+ + L+ I AD+AMY GKQ GR+ C++ Sbjct: 237 NETFSYEHHIINVTATFGVAPVRDDGSLERSIELADKAMYHGKQHGRDICIY 288 >UniRef50_A7MIT6 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MIT6_ENTS8 Length = 216 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 119/205 (58%) Query: 82 MHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRR 141 MH+ R L+ +I A+ + F A++ DY+ L+++R+ D LTGLP R+ Sbjct: 1 MHDYARTLIQSIASKRVDSDELYAYHDAQQQFVASVDDYRQQLISLRNRHDTLTGLPLRQ 60 Query: 142 VLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYET 201 ++ E F +A L+L+++DIDRFK VNDTYGH GD VLR +A L + R E Sbjct: 61 LMYEDFAFLHAHAREQTLWLLIIDIDRFKKVNDTYGHNAGDDVLREVAQRLKTEARGGER 120 Query: 202 VYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEP 261 VYR+GGEEFI+++ A + A AG+R C + + + +TVT G++ P+E Sbjct: 121 VYRFGGEEFIVLLDAHTSQAAREAGLRFCGSPGRRPLRLNGETLTVTVTGGLTCVRPDET 180 Query: 262 LDVVIGRADRAMYEGKQTGRNRCMF 286 L IGRAD AMY GK GRNRC+ Sbjct: 181 LHEAIGRADDAMYFGKNNGRNRCIL 205 >UniRef50_Q0EXC9 Signaling protein with a GGDEF domain n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC9_9PROT Length = 308 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/283 (29%), Positives = 139/283 (49%), Gaps = 6/283 (2%) Query: 7 EIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDN 66 E+D IL+ +++AID H QW + +++ + + +Y C+FG+W Sbjct: 17 ELDGILIQIDQAIDNHDQWYAQLERTLICKLPPDQRDLEKDAYKQCRFGQWYYQYSSPAL 76 Query: 67 DELPYVRLMDSAHQHMHN-CGRELMLAIVENHWQDAH-FDAFQEGLLSFTAALTDYKIYL 124 P ++ HQ +H L +++ E D H FD F L L K + Sbjct: 77 RSHPTFASIEHEHQLLHERVSGLLQVSMAEAKPIDVHVFDEFANTLQRMRLLLFSLKHEI 136 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRN--AEPLN-LYLMLLDIDRFKLVNDTYGHLIG 181 +N+D LTG R + +F H+ + A +N + +LD+D FK VND YGH +G Sbjct: 137 EGDLNNLDPLTGAYNRFGM-MAFLHEQQELVARGVNSCSIAMLDLDFFKQVNDQYGHKMG 195 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D VL ++A+ L R Y+ ++RYGGEEF+ + E A R+ + V++ I Sbjct: 196 DHVLTSIASTLLKGLRPYDKLFRYGGEEFVAVFPNTAVESALLVAERVRKYVEDTIIEID 255 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + + ITV+ G++ +++ + +AD AMY KQ GRN+ Sbjct: 256 KLPVRITVSVGIAAIDANTSVEISVEQADIAMYTAKQNGRNQV 298 >UniRef50_Q2BP87 Methyl-accepting chemotaxis protein-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP87_9GAMM Length = 385 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/169 (44%), Positives = 103/169 (60%), Gaps = 10/169 (5%) Query: 126 TIRSNM---DVLTGLPGRRVLDESFDHQLR--NAEPLN-LYLMLLDIDRFKLVNDTYGHL 179 TIR NM D LT L RR L+ES D +R N N LY++ LDID FK VNDTYGH+ Sbjct: 218 TIR-NMAIRDPLTQLYTRRYLNESEDSFVREDNRNQFNHLYIVFLDIDFFKQVNDTYGHM 276 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 +GD VL + L + TR + RYGGEEF+++ A +DE + R+ + H +T Sbjct: 277 VGDQVLSKVGEVLRTHTRAQDLCVRYGGEEFVVMTLANSDEPVLKLTERLRK--HTHELT 334 Query: 240 HSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 +EG IT++AG++R +E V+ RAD+ +YE KQTGR+R +F D Sbjct: 335 FAEGQ-QITLSAGIARREVDESFAHVLQRADQNLYEAKQTGRDRIIFND 382 >UniRef50_C0QQG6 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QQG6_PERMH Length = 430 Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 79/275 (28%), Positives = 145/275 (52%), Gaps = 14/275 (5%) Query: 19 IDAHYQWLVSMFHSVVA-RDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDS 77 + H WL + + R S E+ N C+F R ++ L+ + + L D Sbjct: 161 VKEHLVWLNKIIEDIKKLRKESSVELDVNK----CKFSRLLEDETVLNISKKKFNILKD- 215 Query: 78 AHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLS--FTAALTDYKIYLLTIR-SNMDVL 134 H+ +H ++ +I E ++ + FD LS F + LT KI + ++ +N+D L Sbjct: 216 IHEKIHKTAIDIYYSIEERNFINLLFDYINLQKLSAQFLSLLT-VKIAVRSVEDANVDPL 274 Query: 135 TGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYL 192 TG+ RR ++ ++Q + ++ N + + LLDID FK +ND+YGHL+GD V++ +++ L Sbjct: 275 TGVLNRRPMEFILNNQYQISKISNRPVSIALLDIDDFKKINDSYGHLVGDCVIKQVSSIL 334 Query: 193 ASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAG 252 R + ++R+GGEEF+I + +A + ++ + ++ I + I +TV+ G Sbjct: 335 QKSLRKSDLIFRFGGEEFLIFMPFTEKRDAFKVMEKLRKKIEEKDIICGKNTIKVTVSVG 394 Query: 253 VSRA--FPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 V A P E ++ +I RAD+ M K+TG+N+ + Sbjct: 395 VEGATLHPNETVNDIIERADKKMLRAKRTGKNKVV 429 >UniRef50_A4U5Q6 GGDEF domain protein n=2 Tax=Magnetospirillum RepID=A4U5Q6_9PROT Length = 288 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 22/294 (7%) Query: 4 KTTEIDAILLNLNKAIDAHYQWLVSMFHSVVAR-DASKPEITDNHSYGLCQFGRWIDHLG 62 K E+ A L + + H+ WL + +V+ R D K + + C F +W + G Sbjct: 2 KPEEVFASLTAFQQGLAGHFDWLHRWYQAVLNRQDGVK---FPDPAACACPFDQWHKNAG 58 Query: 63 PLDNDELPYVRLMDSAHQHMHNCGRELM-LAIVENHWQDAHFDAFQEGLLSFTAALTDYK 121 + P + + H +H+ +L A + ++ +LSF A + Sbjct: 59 GTPFADFPDFAQLAAEHDEVHDKAAQLSGRAQAGLTVTTSDYETLMMSVLSFGATAQSLE 118 Query: 122 IYLLTIRSNMDVLTGLPGRRVLDESF----DHQLRNAEPLNLYLMLLDIDRFKLVNDTYG 177 + + +D LTGL R+ + D +R PL+L L DID FK +ND +G Sbjct: 119 REVWKALATVDPLTGLSNRQSMRTHLMGERDRAIRQKLPLSL--ALADIDHFKKINDGFG 176 Query: 178 HLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDE------EACRAGVRICQ 231 H GD VLR +A L + R Y+ VYRYGGEEF++ + N E E RA + + Sbjct: 177 HSQGDKVLRAVAAVLKATVRPYDVVYRYGGEEFLLCLPGTNAENGALVLERIRAAIAALE 236 Query: 232 LVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 L D+ I +T T G++ + +D I ADRA+Y+GK GRN+ + Sbjct: 237 LTDDRGTP-----IPVTATFGIAEINADLSVDDAIELADRALYDGKLGGRNKVV 285 >UniRef50_B7RWB9 GGDEF domain protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RWB9_9GAMM Length = 400 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/166 (42%), Positives = 100/166 (60%), Gaps = 7/166 (4%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGD 182 LT +N+D LTGL RR+++ + ++ A NL ++LLD+D FK NDTYGH GD Sbjct: 230 LTDLANIDELTGLGNRRLVNTALKEEINRARRSGTNLSVVLLDVDYFKNYNDTYGHPAGD 289 Query: 183 VVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 VL+ LA + T R E V RYGGEEFI+++ A+ + A R R+ +LV+ AI H Sbjct: 290 TVLQKLANIMTKATSRAGEVVARYGGEEFILLLPGASHDSAMRTANRLKELVELEAIPHE 349 Query: 242 EGHIN--ITVTAGVSRAFPEEPL--DVVIGRADRAMYEGKQTGRNR 283 + +TV+ GV P+ + VI RAD+A+YE K+TGR+R Sbjct: 350 NSSVADVLTVSQGVVTVQPDGDMLPSEVISRADKALYEAKKTGRDR 395 >UniRef50_Q1GXA8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GXA8_METFK Length = 521 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/178 (36%), Positives = 100/178 (56%), Gaps = 13/178 (7%) Query: 119 DYKIYLLTIR-------SNMDVLTGLPGRRVLDESFDHQLRNAE----PLNLYLMLLDID 167 + +IY LT++ ++ D LTG RR +DE+ +L A+ PL++ +M DID Sbjct: 335 EKQIYELTLQLDRINEIAHEDYLTGTLNRRGMDEALVRELNRADRFGMPLSIAMM--DID 392 Query: 168 RFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGV 227 FK +ND GH GD L LA+ + R + + RYGGEEFII++ +++A + Sbjct: 393 HFKQINDNLGHATGDQALAHLASVIKESLRTTDVIARYGGEEFIILLPGTAEQDAISVIM 452 Query: 228 RICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 R + + H++ HI IT +AGV+ EP D +IGR D+A+Y K +GRNR + Sbjct: 453 RAQRELTRKIFLHNDSHILITFSAGVAERKAGEPADAIIGRTDQALYRAKNSGRNRVV 510 >UniRef50_B9QZJ3 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QZJ3_9RHOB Length = 301 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 62/155 (40%), Positives = 91/155 (58%), Gaps = 4/155 (2%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATY 191 D LTG+ RR L+ F + P +L LLDID FK VNDTYGH+IGD VL+ +AT Sbjct: 143 DSLTGIYNRRYLEAEFAARHSRPSP-KYFLALLDIDHFKNVNDTYGHIIGDQVLKLVATA 201 Query: 192 LASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHA-ITHSEGHI--NIT 248 + S R + + RYGGEEF I+ +A++ E R+ V H + +GH ++T Sbjct: 202 IKSLIRSQDVLCRYGGEEFAILFDSADETECADVVERVRLGVTKHKLVNRKQGHTIGSVT 261 Query: 249 VTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 ++AG++ P++ D + R DR +Y+ KQ GR+R Sbjct: 262 LSAGLALVEPDDDFDTALERVDRLLYKAKQAGRDR 296 >UniRef50_A8UZ69 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZ69_9AQUI Length = 419 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 82/280 (29%), Positives = 143/280 (51%), Gaps = 16/280 (5%) Query: 15 LNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDND-ELPYVR 73 L+ + H+ WL + + + SKP I N + +C+FG+ I++ G LD+ L Y Sbjct: 146 LSGYVKDHFIWLNKLLEDI-KKLRSKPSIELNPN--ICEFGKKINN-GDLDSILTLKYKD 201 Query: 74 LMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRS---- 129 ++ H +H E+ I + +++ + L T+ L + ++ S Sbjct: 202 IVKRIHDSIHQSANEIYFFIEKRAFKNLLIEYIN--LFKNTSRLVSTIALVHSVSSEAEA 259 Query: 130 NMDVLTGLPGRRVLDESFDHQ--LRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 N+D LT L RR ++ +Q L + + L D+D FK +NDTYGHL+GD VL+ Sbjct: 260 NIDPLTHLFNRRAMEIILTNQYTLSKITGNDFVIGLADMDDFKKINDTYGHLVGDCVLKE 319 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 +A + S R + V+RYGGEEF+I++ EA + ++ Q + I I+I Sbjct: 320 VAVRIKSVLRKSDFVFRYGGEEFLILLPYTTKREALKVLEKVRQSIIAEPIKCKNNMIDI 379 Query: 248 TVTAGVSRAFPEEP--LDVVIGRADRAMYEGKQTGRNRCM 285 T++ G + + E P L+ +I AD+ +Y+ K+TG+N+ + Sbjct: 380 TISIGAA-SLTENPEYLEKLIELADKRLYKAKRTGKNKVV 418 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 97/164 (59%), Gaps = 7/164 (4%) Query: 129 SNMDVLTGLPGRRV----LDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 ++ D LTGL RR LDE + +R EPL L ++LD+D FK +NDTYGH GD+V Sbjct: 261 ASTDELTGLKNRRQIMKRLDEEYQRAIRLGEPLCL--IMLDLDHFKKINDTYGHPFGDLV 318 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 L+ +A ++ R Y+ + R GGEEF+I+ EEA R+ V+ I + + Sbjct: 319 LKCVAGHMKKALRRYDVLGRIGGEEFLIVSPGTTREEAVVLAQRLRSTVEMEKIAYEDKK 378 Query: 245 INITVTAGVSRAFP-EEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 + ITV+ GV+ + ++ +++++ RAD A+Y KQ GRNR + I Sbjct: 379 VTITVSCGVAFLYKGDDNVEILLKRADSALYIAKQEGRNRVVAI 422 >UniRef50_C5UZW0 Diguanylate cyclase n=2 Tax=Gallionellaceae RepID=C5UZW0_9PROT Length = 599 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 63/156 (40%), Positives = 89/156 (57%), Gaps = 2/156 (1%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTG RR LD +FD + R + +L + LLDID FK +NDT GH +GD L L Sbjct: 441 DQLTGALNRRGLDAAFDRESRRVDRSHESLCIALLDIDNFKRLNDTMGHQVGDKALIHLC 500 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + R ++V RYGGEEF++I+ EA R+ + + H I +T Sbjct: 501 HVIKEALRPSDSVARYGGEEFVLILPDVTLAEAALTVERLQRELTKQFFMHENDRILVTF 560 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 +AGV++ P E + +IGRAD+AMY+ KQTG+NR + Sbjct: 561 SAGVAQLAPNESQEELIGRADKAMYQAKQTGKNRVV 596 >UniRef50_C4XNA6 Response regulator receiver protein n=2 Tax=Desulfovibrio RepID=C4XNA6_DESMR Length = 430 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 5/164 (3%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGHLIG 181 +L IR+ D LTG+ R L E+ + + ++ P +L +++ DID FK VND YGH G Sbjct: 268 ILRIRAATDALTGIANRAGLAEALEREFHRSQRHPASLSVIIFDIDHFKNVNDAYGHPAG 327 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D VL L + + RD++T RYGGEEF+II + EA + R+ V H Sbjct: 328 DAVLAELTRLVTTHVRDHDTFGRYGGEEFLIIAPGTDVAEAAKLAERLRSDVARHGFPAV 387 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 ++T + GV+ A P++ D ++ RAD A+Y+ KQ+GR+R + Sbjct: 388 G---SLTCSFGVAVAGPDDTPDSLVARADTALYDAKQSGRDRVV 428 >UniRef50_A4A4X4 GGDEF family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A4X4_9GAMM Length = 503 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/175 (38%), Positives = 97/175 (55%), Gaps = 11/175 (6%) Query: 119 DYKIYLLTIRSNMDVLTGLPGR----RVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVND 174 + ++ +L + D LTG R LD FD ++ +PL+L M +D D FK VND Sbjct: 316 EQRVSMLERQGQRDSLTGAINRGHFHSELDRLFDEATQSGQPLSL--MFIDADHFKQVND 373 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 +YGHL GD VL+ LA D V RYGGEEF++I+ A+ + EA G IC V Sbjct: 374 SYGHLAGDEVLKWLAEAFTKLVGDKGIVGRYGGEEFVVILPASTEAEANALGQTICDHVR 433 Query: 235 NHAITHSEGHINITVTAGVSRAFPEEPL----DVVIGRADRAMYEGKQTGRNRCM 285 N I+ + +I +TV+AG++ L D++ AD+AMY KQ+GR+ C+ Sbjct: 434 NGHISAGDANIQVTVSAGIATIDKTSTLRGTRDLIFA-ADQAMYFAKQSGRDLCI 487 >UniRef50_C2L1F7 Possible diguanylate cyclase n=1 Tax=Oribacterium sinus F0268 RepID=C2L1F7_9FIRM Length = 420 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 102/181 (56%), Gaps = 9/181 (4%) Query: 121 KIYLLTIRSNMDVLTGLP----GRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTY 176 +I L+ + MD LTG G+R+L+ S++ +N ++++D+D FK ND Y Sbjct: 241 RIQELSEENAMDELTGAKSRKAGKRILEHSYNRY--KTIGVNAKILMMDVDYFKSYNDRY 298 Query: 177 GHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNH 236 GH GD L+ L + R + V R+GG+EF+ ++ ND A + +IC+ V +H Sbjct: 299 GHSFGDQCLQHLVKVIQETVRSSDDVIRWGGDEFLCVLYDLNDLYAEKVCNKICEAVASH 358 Query: 237 AITHSEGHINITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVIN 294 I H E +N+TV+ G S F E E + V+ RADRA+Y+ K GRN+ M DE+N I Sbjct: 359 PIKHGEEELNMTVSIGYS-GFHESDEDAEEVVKRADRALYDAKYHGRNQAMMYDEENDIY 417 Query: 295 R 295 R Sbjct: 418 R 418 >UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0Y0_9NEIS Length = 528 Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 91/159 (57%), Gaps = 7/159 (4%) Query: 129 SNMDVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 + D LTGLP RR L+E+ + QL RN E +L +LLDID FK+VND YGH GD V Sbjct: 354 ARTDTLTGLPNRRALEEALEQQLQRSRRNGEQASL--VLLDIDHFKVVNDRYGHDAGDAV 411 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 +R L ++ R+ + R+GGEEF++++ ++E A R+ V++ + H E H Sbjct: 412 IRALGKAMSETIRNVDVAGRWGGEEFLVVLANVDEEGAAAFAERLRTRVESSTVAHGELH 471 Query: 245 INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 + T++ GV+ + + RAD A+Y K GRNR Sbjct: 472 VRYTISLGVA-PLSTPHREAWLKRADEALYRAKLDGRNR 509 >UniRef50_A8TN49 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN49_9PROT Length = 305 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 66/195 (33%), Positives = 104/195 (53%), Gaps = 8/195 (4%) Query: 98 WQDA-----HFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLR 152 W+DA +DA E + +F S++D LTG R+V+ +++ Sbjct: 99 WKDAKVPVEEYDALLEKVQAFDELAGRLVRAFQAAISDLDPLTGAQTRQVMLRDLKREVQ 158 Query: 153 NAEPLNLY--LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEF 210 A L + DIDRFK +ND +GH +GD VL ++ L R Y++VYRYGGEEF Sbjct: 159 RARRSGTPGCLAIADIDRFKSINDGHGHAVGDSVLAAVSGLLIESLRPYDSVYRYGGEEF 218 Query: 211 IIIVKAANDEEACRAGVRICQLVDNHAITHSEG-HINITVTAGVSRAFPEEPLDVVIGRA 269 ++ + EEA R R+ + + H + G ++ +T++ G++ P PL+ +I RA Sbjct: 219 LLCLPETGPEEARRVLDRVRERIAGHPVMIDGGKNLVVTISFGLTLMTPRRPLEELIDRA 278 Query: 270 DRAMYEGKQTGRNRC 284 DRA+Y K++GRNR Sbjct: 279 DRALYLAKESGRNRV 293 >UniRef50_B8GTD8 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTD8_THISH Length = 451 Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 2/158 (1%) Query: 131 MDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 +D LTG+P R+ DE + + N L L++ D+DRFKL+ND+YGH GD V+R + Sbjct: 293 IDQLTGVPNRQAFDERLAQEYSRWKRFNTPLALIMWDVDRFKLINDSYGHKAGDKVIRAV 352 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 A L R+ + V RYGGEEF++++ A+ ++A +I + + IT Sbjct: 353 AQKLKERIRETDMVARYGGEEFVMLLTGASGQDALAIAEKIRAEIAGLGFHFRGERVPIT 412 Query: 249 VTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 ++AG++ + + ADRA+YE K TGRNRC+ Sbjct: 413 ISAGIALFAEGDTPETAFDNADRALYEAKNTGRNRCVL 450 >UniRef50_Q73RG3 GGDEF domain protein n=1 Tax=Treponema denticola RepID=Q73RG3_TREDE Length = 371 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 1/127 (0%) Query: 159 LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAN 218 L ++++DID FK +NDTYGH GD+VL +A + S TR+ +T RYGGEEFI+++ + Sbjct: 235 LSILMIDIDFFKNINDTYGHAAGDIVLEEVAKIIKSCTRNADTAARYGGEEFIVMLNNTS 294 Query: 219 DEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSR-AFPEEPLDVVIGRADRAMYEGK 277 A RI + V+ +I + IN+T++ GVS F E ++ RAD+A+YE K Sbjct: 295 ASAAMAVAERIRKSVEEKSIMYDGKKINVTISIGVSSYNFDLESAKSIVERADKALYESK 354 Query: 278 QTGRNRC 284 Q GRNR Sbjct: 355 QNGRNRV 361 >UniRef50_C7R6M6 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6M6_KANKD Length = 688 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 57/160 (35%), Positives = 94/160 (58%), Gaps = 6/160 (3%) Query: 132 DVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LTGL RR ++ + ++ ++ +PL++ ++ DID FK+VND +GH +GDVVL Sbjct: 530 DSLTGLANRRQIERALKREMESSNQSGKPLSI--LMYDIDHFKVVNDIHGHSVGDVVLTN 587 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 L+ + RD + + R GGEEF+ ++ AN ++A + R+ Q VD T E +N Sbjct: 588 LSNFSKELLRDNDVLGRTGGEEFLAVLPNANLDQAIQVAKRLQQEVDLKQYTEIESELNA 647 Query: 248 TVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 T++ GV+ E +D + R D A+Y+ K+ GRNR ++ Sbjct: 648 TISVGVTEYKQGEHMDEFLRRVDEALYQAKENGRNRVEYV 687 >UniRef50_C1DTK4 Signal transduction response regulator n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DTK4_SULAA Length = 271 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 35/237 (14%) Query: 53 QFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLS 112 +F + + L + N + +++ H+ + N EL +A QDA Sbjct: 68 KFSKILQELEFIKNQNESLTKKLENYHKEIQNLNMELKIA-----KQDA----------- 111 Query: 113 FTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFK 170 +D LTG+ RR D + + L+ + L+LLDID FK Sbjct: 112 -----------------TIDFLTGVVNRRSFDRTLGNLLKEVREKDYIFTLILLDIDNFK 154 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 VNDTYGHL GD+VL+ ++T L + R + R GGEEF II+ + E + RI Sbjct: 155 SVNDTYGHLAGDLVLKEISTVLRIFLRANTIIGRIGGEEFGIILPGVSLENGIKVAERIR 214 Query: 231 QLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 +++N + + I T + GV+ + E+ + + R D A+Y K+ G+NR F+ Sbjct: 215 SIIENREVKFEDRIIKFTASFGVTESKKEDTKESIYKRVDEALYIAKRNGKNRVAFL 271 >UniRef50_A5G157 Diguanylate cyclase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G157_ACICJ Length = 359 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 64/167 (38%), Positives = 90/167 (53%), Gaps = 7/167 (4%) Query: 129 SNMDVLTGLPGRRVLDES---FDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVL 185 + D LT + RR D F Q R A PL L+L DID FK ND +GH GD++L Sbjct: 190 ATTDSLTAITNRRAFDTKARRFITQTRGAAPLVACLVLFDIDNFKWFNDVHGHQTGDLIL 249 Query: 186 RTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQ-LVDNHAITHSEGH 244 R +A L+ + +TV RYGGEEF +++ A+ A +ICQ + D + S G Sbjct: 250 RLVARLLSDSVKGRDTVARYGGEEFAVLLAGADLRSAISVARQICQSMADRKLVKRSSGQ 309 Query: 245 --INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR-CMFID 288 +T++AGV++ E L + RAD A+Y K+ GRNR C +D Sbjct: 310 QLTQVTLSAGVAQFIGGENLASWVSRADAALYRAKELGRNRVCSELD 356 >UniRef50_A6VSB0 Diguanylate cyclase n=2 Tax=Gammaproteobacteria RepID=A6VSB0_MARMS Length = 296 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 82/289 (28%), Positives = 130/289 (44%), Gaps = 15/289 (5%) Query: 7 EIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDN 66 ++ I+ L++AI H QW + ++ R + ++ C FG+W + Sbjct: 8 QLQLIIAQLDQAIFNHDQWYKHILRILILRIPPEKADIAPEAHRHCHFGQWYESSQAFFI 67 Query: 67 DELPYVRLMDSAHQHMHNCGRELM------LAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 E P + AH+ MH + L+ L I+ W D+F + + A Sbjct: 68 RENPAFISLGDAHKKMHISAQNLLQKISDGLLILSIDW-----DSFDKDIDKMRLAFQSL 122 Query: 121 KIYLLTIRSNMDVLTGLPGRR-VLDESFDHQ-LRNAEPLNLYLMLLDIDRFKLVNDTYGH 178 + I N D LT R +L E D L N L++ D+D FK VNDTYGH Sbjct: 123 RHEFTVIAKNRDPLTEAQTRDGMLAEISDQNALVQRGQQNCALVMFDLDHFKQVNDTYGH 182 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 + GD+VL + + + R Y+ +YRYGGEEFII + +A R+ + + I Sbjct: 183 IAGDLVLVSTVQRIKTLLRPYDRIYRYGGEEFIICMPRTTLAQAHMVAERMREAIAEQNI 242 Query: 239 T--HSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 +S + +T + GV+ ++ I D+AMYE K+ GRNR + Sbjct: 243 QFDNSRESLRVTASFGVTILTQLRSVEESIDYVDKAMYEAKRAGRNRVV 291 >UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q525_NITSB Length = 350 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 3/158 (1%) Query: 128 RSNMDVLTGLPGRRVLDESFDHQLRN---AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 ++ D LT L RR +E F L+ E L++LDID FK +NDTYGHL+GD V Sbjct: 188 KAEFDYLTELFNRRKFEEYFHKLLKEFNEGEGKPFSLIILDIDDFKQINDTYGHLLGDEV 247 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 L+ L++ + ++ R GGEEF I++ +EA R+ + V+N I +EG Sbjct: 248 LKNLSSLIKTFLHSAHIPARIGGEEFAILLPETPLDEAKTIAERLRKTVENRTIPIAEGD 307 Query: 245 INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 +N TV+ GV++ + +D ++ RAD A+YE K+ G+N Sbjct: 308 LNFTVSIGVAQVQKGDTMDSLLKRADEALYEAKRNGKN 345 >UniRef50_Q2BRK2 Signaling protein with a GGDEF domain n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRK2_9GAMM Length = 330 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 9/288 (3%) Query: 14 NLNKAIDAHYQWLVSMFHSVVARDASKPE---ITDNHSYGLCQFGRWIDHLGPLDNDELP 70 ++ ++ H+ WL + ++ R K D H + C FG W+ ++ + + P Sbjct: 20 DIKSSLAEHHIWLQRINLAIATRTPIKEHSFIAEDGHRH--CHFGLWLANIMAEEEFDSP 77 Query: 71 YVRLMDSAHQHMHNCGRELMLAIVENHWQDAH-FDAFQEGLLSFTAALTDYKIYLLTIRS 129 ++ H +H G EL+ ++ H D + +F + F A+ + + + Sbjct: 78 IFDQINQLHVKLHLKGSELIYSLDLGHPLDESLYASFLDTQRQFFNAVLELLEFSVISTH 137 Query: 130 NMDVLTGLPGRRVLDESFDHQLRNAEPLN---LYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 D T L RR + H+ + E + + DIDRFK ND YGH +GD VL Sbjct: 138 QFDPTTKLMNRRSIHSILAHEKQRMEKTKDTVCAIAMADIDRFKAFNDRYGHDLGDKVLE 197 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 +A+ S R Y++V R+GGEEF+ ++ ++A R+ + + I G + Sbjct: 198 HVASVFNSAIRRYDSVARFGGEEFLFVLPDMTIKDATNTIERVRKKLSTSPIESEFGPLA 257 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVIN 294 +T + G+++ P + + RAD A+YE K GRN C+ +D ++ Sbjct: 258 VTASFGITQLCPHCNTEGSLKRADVALYEAKARGRNLCVSVDASKLLQ 305 >UniRef50_C6BU46 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BU46_DESAD Length = 490 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 88/286 (30%), Positives = 140/286 (48%), Gaps = 17/286 (5%) Query: 8 IDA-ILLNLNKAIDAHYQWLVSMFHSVVA---RDASKPEITDNHSYGLCQFGRWIDHLGP 63 IDA I +N +A + +W+ M +VVA + S +++ G Q I G Sbjct: 203 IDAEIFINPGQAENVQSEWVELMIENVVALSGMEVSSYNMSETVPVGSNQM---IYSPGA 259 Query: 64 LDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIY 123 LP V + + C R + LA + +A + L+ + A+ KI Sbjct: 260 GRILALPLVARGEKFGCLVMLCERNIRLAKDQVSSLNAAVNHLS---LALSNAIMFNKI- 315 Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIG 181 R+N D LT + RR DE + + + LN L L+++D+D FK VNDTYGH+ G Sbjct: 316 --KTRANRDGLTRVYNRRSFDERLVEEFKRHQRLNTELSLLMVDLDYFKAVNDTYGHMAG 373 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D+VL +A R + + RYGGEEF+I++ +++A RI +++ A+T+ Sbjct: 374 DMVLEKVARMFEKTFRSTDFIARYGGEEFVILLPHTREDQAEMLAERIRAKIESCAMTYQ 433 Query: 242 EGHINITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCM 285 + NIT + GVS P E ++ +AD A+Y+ K GRNR + Sbjct: 434 DKSFNITASIGVSSVRPGSLEKDTEIVRKADEALYDAKMQGRNRVV 479 >UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TG17_HELMI Length = 324 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/188 (38%), Positives = 105/188 (55%), Gaps = 13/188 (6%) Query: 107 QEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDE----SFDHQLRNAEPLNLYLM 162 +E LL TA L + + L S++D LTGL RR DE + +RN P++L + Sbjct: 132 EEELLRVTAELEE-AVRKLQNLSSLDGLTGLANRRRFDEYLASEWKRAIRNGTPISL--I 188 Query: 163 LLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEE 221 L DID FK NDTYGH+ GD L+ +A+ + R + V RYGGEEF +I+ + E Sbjct: 189 LFDIDWFKPYNDTYGHIQGDDCLKAIASLMPKVVRRSSDLVCRYGGEEFAVILPDTSQEG 248 Query: 222 ACRAGVRICQLVDNHAITHSEGHIN-ITVTAGVSRAFP---EEPLDVVIGRADRAMYEGK 277 A I + + I H + ++ +TV+ GV+ A+P EP+ +IG AD A+YE K Sbjct: 249 ALAVAESIREALSEAGIEHRQSPLDRVTVSVGVATAYPSPSSEPV-TLIGYADEALYEAK 307 Query: 278 QTGRNRCM 285 + GRNR + Sbjct: 308 RQGRNRTV 315 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 91/159 (57%), Gaps = 6/159 (3%) Query: 129 SNMDVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 + D LTGL RR E+ +H++ R PL L + +D+DRFK VNDT+GH +GD V Sbjct: 550 ATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLAL--ISIDVDRFKRVNDTWGHAVGDEV 607 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 LR LA + RD +TV R GGEEF +++ EEA R+ V+ + + G Sbjct: 608 LRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAERLRAGVEAAPLLTTAGP 667 Query: 245 INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 + +T++ GVS + P + D ++ ADRA+Y K GRNR Sbjct: 668 LTVTLSLGVSASPPCDGADTLLREADRALYRAKAGGRNR 706 >UniRef50_B2JTM3 Diguanylate cyclase n=3 Tax=Burkholderia RepID=B2JTM3_BURP8 Length = 202 Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 98/177 (55%), Gaps = 1/177 (0%) Query: 109 GLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDR 168 GL+ AA++D I LT+ ++D LT RR + ++ + L L+ DID Sbjct: 11 GLVLPAAAMSDV-IDRLTLERDLDSLTETLNRRAFERMAGRRVADRRSYPLALIAFDIDN 69 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK +ND YGH GD VLR A L + R+ + V R GGEEF++++ A+D+ A + R Sbjct: 70 FKSINDRYGHAAGDAVLRQFAAILRAAVREKDVVARIGGEEFVLLLPGADDKFAYQIAER 129 Query: 229 ICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + ++++ E + +T +AG++R P E + ++ RAD +Y K+ GRNR + Sbjct: 130 LRIVLESSRFNEIEATLRVTTSAGIARHRPGETVGALLARADHLLYAAKRAGRNRVV 186 >UniRef50_A8ESJ8 GGDEF domain protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ESJ8_ARCB4 Length = 433 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 22/277 (7%) Query: 22 HYQWLVSMFHSVVARDASK-PEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQ 80 H +WL + ++V D + PEI N LC FG+W+D G + + H+ Sbjct: 160 HLEWLEDLAKAIVLADINIFPEINHN----LCTFGKWLDKEGLEIIKNSSKYKNISKLHE 215 Query: 81 HMHNCGRELMLAIVE----NHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTG 136 ++H +++ ++E NH + + + LS L L+ ++ D LTG Sbjct: 216 NLHFFAKQIKNCLIETQGNNHIILIYLEKCEMISLSLGTELALIDNTLINSEASKDPLTG 275 Query: 137 LPGRRVLDESFDHQLRNA----EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYL 192 R+ L + + +QL + EP + + D D FK +NDT+GHL GD +L++ Sbjct: 276 ALNRQRLSQLYQNQLEISFATFEPF--VIAMCDFDHFKNINDTFGHLAGDKMLKSFVHIA 333 Query: 193 ASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAG 252 R + + RYGGEEF+II+ A N ++A +I + + N + I+ T++ G Sbjct: 334 KKHLRTSDIIIRYGGEEFMIILPAINTKKAKDILNKIREDIANFVLNLDGNKISATISIG 393 Query: 253 VSRAFPE-------EPLDVVIGRADRAMYEGKQTGRN 282 + +PE + + I D+ +YE K +GRN Sbjct: 394 MIEIYPENGNNSYFKDFENTISLVDKKLYEAKNSGRN 430 >UniRef50_B1KP16 Diguanylate cyclase n=6 Tax=Proteobacteria RepID=B1KP16_SHEWM Length = 485 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 99/166 (59%), Gaps = 6/166 (3%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAE----PLNLYLMLLDIDRFKLVNDTYGHLI 180 L + ++ D LTG R++ +E F H L+NAE P+++ +LLDID FK VND +GH I Sbjct: 320 LEVMASTDKLTGATNRQMFEEYFSHSLQNAEISATPVSV--ILLDIDYFKSVNDNFGHSI 377 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD+V++T+A + R + V R+GGEEF++++ + A RI + + I+ Sbjct: 378 GDLVIKTVANIIRRQLRSEDIVCRWGGEEFLLLLPNIDLSHAADMAERIRESIAERKISV 437 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 +E I ITV++GV++ EP +I R D A+Y+ K GR++ + Sbjct: 438 NEHEIGITVSSGVAQYKLGEPRADLINRVDVALYQAKDRGRDQVVL 483 >UniRef50_Q15PX0 Diguanylate cyclase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PX0_PSEA6 Length = 561 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 93/164 (56%), Gaps = 7/164 (4%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLR--NAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 S +D LTG+P RR LDE + +LR N E +L L+++D+D FKL ND YGH GD L Sbjct: 390 SLLDGLTGIPNRRALDERLERELRLANREKWSLSLLMIDVDYFKLYNDNYGHAAGDTALV 449 Query: 187 TLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH--SEG 243 +A L + R + RYGGEEF+ I+ + + A R + + V + + H S Sbjct: 450 AIAQLLERFAQRSGDFAARYGGEEFVFILPNTDKDGAIRVATALLEAVRDANLEHKYSPK 509 Query: 244 HINITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNRCM 285 ++T++ GVS P++P D V AD A+Y KQ+GR+R + Sbjct: 510 EEHLTISIGVSTCQPQDPKDADYVQRLADHALYSAKQSGRDRMV 553 >UniRef50_B7KC88 Diguanylate cyclase with Chase2 sensor n=2 Tax=Cyanothece RepID=B7KC88_CYAP7 Length = 583 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 11/193 (5%) Query: 98 WQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFD---HQLRNA 154 W F F LS A+ +YK Y L + D LT + RR D+ + H+++ Sbjct: 389 WWLPVFTPFIALTLS-ALAIPNYKNYELYQIACKDSLTQISNRRYFDQYYPQIWHRIKET 447 Query: 155 E-PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIII 213 + PL++ +L D+D FKL NDTYGH GD L+ +A + R + V RYGGEEFII+ Sbjct: 448 QHPLSV--ILCDVDFFKLYNDTYGHQAGDRCLQQVAQAITKAVRSTDLVARYGGEEFIIV 505 Query: 214 VKAANDEEACRAGVRICQLVDNHAITHSEGHIN--ITVTAGVSRAFPE--EPLDVVIGRA 269 + + + E A + G RIC V N I H + I+ +T++ GV+ + P V+I A Sbjct: 506 LPSTDRETAYQIGQRICFQVQNLNIPHQQSQISSIVTLSCGVATSCPPHYATSGVLIAAA 565 Query: 270 DRAMYEGKQTGRN 282 D A+YE K GRN Sbjct: 566 DSALYEAKAKGRN 578 >UniRef50_B6JJ79 Putative diguanylate cyclase n=3 Tax=Bradyrhizobiaceae RepID=B6JJ79_OLICO Length = 352 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/168 (41%), Positives = 98/168 (58%), Gaps = 8/168 (4%) Query: 128 RSNMDVLTGLPGRRVLDESFDH-QLRNAEPLN-LYLMLLDIDRFKLVNDTYGHLIGDVVL 185 R+ D LT LP RR L+E F Q+R E + L L++LDID FK NDTYGH +GD V+ Sbjct: 178 RAKTDTLTSLPNRRALEEFFRAAQMRAMEVEDPLSLLMLDIDHFKKFNDTYGHNVGDQVI 237 Query: 186 RTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRA-GVRICQLVDNHAITH---S 241 R +A+ L R+ + RYGGEE I ++ A D CRA RI + V +T Sbjct: 238 RLIASVLRERVRENDLPARYGGEELIAVLPGA-DLATCRAVAERIRETVAGCHLTRRSTG 296 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 E +I+V+ GV++ P E + +I R DRA+Y+ K +GRN C+ ++ Sbjct: 297 ESLPDISVSVGVAQFRPGESMASLIERCDRALYKAKASGRN-CVITED 343 >UniRef50_Q2Y8W7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y8W7_NITMU Length = 360 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/160 (39%), Positives = 98/160 (61%), Gaps = 5/160 (3%) Query: 128 RSNMDVLTGLPGRRVLDESFDHQLRNAEPL-----NLYLMLLDIDRFKLVNDTYGHLIGD 182 R+ D LTG+ R L ES +H ++ AE +L L++ D+D FK +NDTYGH++GD Sbjct: 193 RTWTDELTGVMNYRKLMESLEHHVQRAERRGQERSSLCLIMSDLDFFKKINDTYGHMVGD 252 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 +VL+ LA + S TRD++ + R+GGEEF++I+ + E A RI V + + Sbjct: 253 LVLQHLARRIKSATRDFDMIGRFGGEEFVVIMADTDLELAKVIAERIRLGVMSTPFHIKK 312 Query: 243 GHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 +I++T++ GV+ P E + ++ RAD AMYE K+ GRN Sbjct: 313 FNIHVTISLGVAMLKPGESRESLLERADAAMYEAKRRGRN 352 >UniRef50_D0I2V0 GGDEF family protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I2V0_VIBHO Length = 341 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATY 191 D LTG+ RR LD + + P L+L D+D FK NDTYGHL+GD VL+ A Sbjct: 182 DALTGIYNRRALDAELEALVATPPPKGFSLLLCDLDHFKRFNDTYGHLMGDQVLKLTAKR 241 Query: 192 LASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI---NIT 248 L+ + RD YRYGGEEF ++V ACR I +D A+ NI+ Sbjct: 242 LSDYCRDGIKAYRYGGEEFALLVPNRPLSGACRVAETIRATIDKLALKDKRTGKKLDNIS 301 Query: 249 VTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 ++ GV+ E + +I RAD +Y+ K+ GRNR M + Sbjct: 302 ISIGVAAFEHGESIRDLISRADTQLYDAKKLGRNRVMPV 340 >UniRef50_C9RM68 Diguanylate cyclase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM68_FIBSS Length = 566 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 96/171 (56%), Gaps = 3/171 (1%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGD 182 L + S D LT LP RR + + + ++ A ++ +DID FK VNDTYGH GD Sbjct: 388 LDLISRTDELTQLPNRRDMHRTIEKEVDRANRFKKAFSIIFIDIDHFKDVNDTYGHAAGD 447 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 VL+++A+ + S R Y+ + RYGGEEF+ ++ ++A R + ++N I Sbjct: 448 AVLKSVASTIRSLLRKYDVLARYGGEEFLTLLPETELKDAAHVAERFRKQIENQTIFFGG 507 Query: 243 GHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC-MFIDEQNV 292 I +T+T GV++ + I AD+A+YEGK+ GRNR ++ D+Q V Sbjct: 508 QEIKVTITLGVAQFDSGLGAERCIQLADKALYEGKEHGRNRVILWTDDQAV 558 >UniRef50_A3YI97 Sensory transduction/ GGDEF family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YI97_9GAMM Length = 416 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 109/205 (53%), Gaps = 9/205 (4%) Query: 86 GRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDE 145 G L + ++E + DA Q L+ T + K LT+ + D LTGL RR L E Sbjct: 212 GSTLWVELIERRIVWNNQDAIQTTLIDVTGQVEMEK--KLTLLAMTDSLTGLFNRRFLME 269 Query: 146 S----FDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYET 201 FD L+ + L L +L+D+D+FK VND +GH IGD +L+ + ++ Sbjct: 270 KSAQIFD--LQQSLKLPLACILIDLDKFKRVNDKFGHNIGDEILKAFSNRCQRMIQEPHI 327 Query: 202 VYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEP 261 + RYGGEEF++++ N E+A + Q+ D AI G + +T++AG+S ++ Sbjct: 328 IGRYGGEEFLVVMPNTNPEDAVTLANTLRQMCDEEAIETGAGDLKVTMSAGISTLNTDDT 387 Query: 262 -LDVVIGRADRAMYEGKQTGRNRCM 285 D ++ RAD+ +YE K GRNR + Sbjct: 388 HFDQLVDRADKRLYEAKALGRNRVV 412 >UniRef50_B1KK06 7TM domain sensor diguanylate cyclase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KK06_SHEWM Length = 623 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 92/157 (58%), Gaps = 3/157 (1%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLR--NAEP-LNLYLMLLDIDRFKLVNDTYGHLIGDVVL 185 + +D+LTGL RR ES L N +P +LYL+++DID FK +NDTYGH GD L Sbjct: 452 ARVDILTGLTNRRAFIESAHGFLARANRQPETHLYLLMIDIDHFKKINDTYGHSAGDAAL 511 Query: 186 RTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI 245 +A L+ R + V R GGEEF +++ + + A R+ + ++ I H I Sbjct: 512 VAVANSLSETIRTIDVVSRLGGEEFAALMENKDPQGAINLSERLRKAIEELVIEHEGQQI 571 Query: 246 NITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 +T + G+++ P + LD ++ +ADRA+Y+ K++GRN Sbjct: 572 KLTTSIGIAKWGPMDNLDTLMNQADRALYQAKESGRN 608 >UniRef50_Q3A2B9 Response regulator/FOG:GGDEF domain protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2B9_PELCD Length = 400 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 92/161 (57%), Gaps = 8/161 (4%) Query: 129 SNMDVLTGLPGRR----VLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 S D LTGLP RR VL E+ + R+ + L+L ML+DID FK VND GH+ GD V Sbjct: 229 SLQDPLTGLPNRRHFFSVLREALEPGHRDGQELSL--MLIDIDYFKEVNDQLGHMAGDEV 286 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 L +A + R +T RYGGEEF +++ A+ + G R+ + +++ + Sbjct: 287 LAIVAHIIGDSVRQCDTACRYGGEEFAVLLPGASSQTVETIGRRLMEKIESADLLAGRSE 346 Query: 245 INITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNR 283 +++TV+ G P + + VIGRADRA+YE K +GRN+ Sbjct: 347 VSLTVSVGFVSLSPGSKISIEEVIGRADRALYEAKNSGRNQ 387 >UniRef50_Q3A1I1 GGDEF domain containing protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1I1_PELCD Length = 648 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 64/155 (41%), Positives = 86/155 (55%), Gaps = 3/155 (1%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTGL R D ++ AEPLN LM++DID FKL ND YGHL GD VLR L Sbjct: 472 DALTGLFNMRYFRTQLDLAIQCAEPLNQSFTLMMMDIDNFKLFNDRYGHLQGDQVLRQLG 531 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN-IT 248 + S R+ + RYGGEEF +I+ + + A R+ + E I+ +T Sbjct: 532 QMIGSVIREKDVACRYGGEEFAVILPGGDFQTAVDIYTRLQGTLLQWQEHEKESLISLVT 591 Query: 249 VTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 ++ GV+ FP E D +I RAD AMYE K+ GR++ Sbjct: 592 LSVGVAEYFPGEHADDLIARADSAMYEAKEGGRDQ 626 >UniRef50_Q30R33 Diguanylate cyclase (GGDEF domain) n=2 Tax=Campylobacterales RepID=Q30R33_SULDN Length = 318 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 24/206 (11%) Query: 79 HQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLP 138 H HM + R+ L I E H K+ +L SN+D LT + Sbjct: 128 HTHMSDEVRKANLVITELHQ----------------------KVKILEETSNLDPLTKVF 165 Query: 139 GRRVLDESFDHQLRNAE-PLN-LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT 196 RR L N P + L++M+LDID FK +ND YGH+ GD +L ++ L Sbjct: 166 NRRSLSSYLQEVCSNKSLPYDDLHVMMLDIDNFKSINDKYGHIAGDKILIFISNILRKTL 225 Query: 197 RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA 256 RD + ++RYGGEEF I++ +D++ + R+ L+ ++ + + I++T + GV++ Sbjct: 226 RDGDKIFRYGGEEFTIVINRNSDDQCEQIANRLLHLISSNNLIYMGERISVTASIGVTKL 285 Query: 257 FPEEPLDVVIGRADRAMYEGKQTGRN 282 + D ++ RAD+A+Y K++G+N Sbjct: 286 KEHDTPDSLLSRADKALYVSKKSGKN 311 >UniRef50_Q6MN29 GGDEF domain protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MN29_BDEBA Length = 408 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 5/190 (2%) Query: 99 QDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNM--DVLTGLPGRRVLDESFDH--QLRNA 154 Q H + + + + LT K L+ + M D LTG RR DE QL Sbjct: 206 QSTHNERRSKRMEAIKKNLTTVKKQLMEANTTMRKDHLTGAHNRRSYDEQIRRYLQLHEI 265 Query: 155 EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLA-SWTRDYETVYRYGGEEFIII 213 + + L+++DID FK +ND+YGH IGD VL+ + S++R+ + + R GGEEF +I Sbjct: 266 DKDPMTLIIMDIDFFKKINDSYGHDIGDFVLQECVRLIQESFSREEDFIARLGGEEFAVI 325 Query: 214 VKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAM 273 + + + A R + H + I TV+ G++ P E D + RAD A+ Sbjct: 326 LPGCDAQAAVRMAEEAMNRIRKEVFVHEKFEIRFTVSLGIAEVMPGEKADALYKRADEAL 385 Query: 274 YEGKQTGRNR 283 YE KQTGRN+ Sbjct: 386 YESKQTGRNK 395 >UniRef50_Q3SJD4 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJD4_THIDA Length = 241 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 4/213 (1%) Query: 25 WLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGP-LDNDELPYVRLMDSAHQHMH 83 W + V ++ D ++ LC+FG W+ H L++ + +D AH+ MH Sbjct: 3 WTRRILRCAVLHTTPDDDVIDPQAHALCRFGGWLAHHHKHLESLDAAAADRVDVAHRAMH 62 Query: 84 NCGRELMLAIVENHWQDAH-FDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRV 142 + R + L IV A DAF++ + L +K +L+ D LT LP R Sbjct: 63 DAMRAICLCIVRGEAAPAEELDAFEQSQEALIQLLATFKTLILSKAGRRDPLTQLPMRHN 122 Query: 143 LDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYE 200 ++ + + A LY+ ++D+D FK +NDTYGH GD VLR +A L R E Sbjct: 123 IESDYLLYQKEARRKRSALYVAMIDVDHFKPINDTYGHPAGDRVLRHVAETLKRTLRSDE 182 Query: 201 TVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 +YRYGGEEF+ ++K + +EA R+ R+ + V Sbjct: 183 PLYRYGGEEFLWLLKCNSPDEAGRSAQRVLETV 215 >UniRef50_A4XPL1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPL1_PSEMY Length = 557 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 63/156 (40%), Positives = 93/156 (59%), Gaps = 5/156 (3%) Query: 132 DVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTGL RR LDE F +L A E L L L L+D+D FK +ND GHL+GD VL+ +A Sbjct: 388 DPLTGLYNRRYLDEFFSRELARAQRENLPLALALIDLDHFKRLNDECGHLVGDDVLKAVA 447 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 +L R + V+R GGEEF++I+ + EAC IC + +I G +T+ Sbjct: 448 KHLLDNLRSTDAVFRIGGEEFLLILPGVDPVEACERLQNICSQLAGQSIATRGGDQQVTL 507 Query: 250 TAGVSRAFPEEP--LDVVIGRADRAMYEGKQTGRNR 283 +AG++ +P++ L+ ++ AD A+Y+ K+ GRNR Sbjct: 508 SAGLAH-WPQQGVVLEELLHAADAALYQAKRGGRNR 542 >UniRef50_B2I0B8 GGDEF domain protein n=11 Tax=Acinetobacter RepID=B2I0B8_ACIBC Length = 409 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 103/180 (57%), Gaps = 12/180 (6%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQ----LRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 L++ S D LTGL RR LDE+ D++ LR+ PL + M++DID FK ND+ GHL Sbjct: 230 LSLLSQQDALTGLANRRYLDETLDNEWRRALRHETPLTI--MMVDIDFFKPYNDSLGHLK 287 Query: 181 GDVVLRTLATYLASW-TRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 GD L+ +AT ++S R + V RYGGEEF+++ N ++A R+ + AI Sbjct: 288 GDQCLKDIATAISSIAARSGDLVARYGGEEFLLLFPMTNAQQAKIQAERLMNAIKKIAIV 347 Query: 240 HSEGHIN--ITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCMF-IDEQNVIN 294 H ++ +T++ GV+ P + + + RAD A+Y+ K GRN+ ++E+ +++ Sbjct: 348 HPCSSVSPYVTISVGVATTIPRLNDSISAFVSRADHALYQAKTNGRNQYQIALNEEQIVD 407 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 65/173 (37%), Positives = 97/173 (56%), Gaps = 8/173 (4%) Query: 117 LTDYKIY--LLTIRSNMDVLTGLPGRRVLD----ESFDHQLRNAEPLNLYLMLLDIDRFK 170 +TD+ IY L + +D LTG+ RR LD E + R+ PL++ M+LDID FK Sbjct: 125 VTDFVIYEHKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSI--MMLDIDHFK 182 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 +NDT+GH+ GD LR ++ L R + + RYGGEEF I+ + E+A R Sbjct: 183 EINDTHGHICGDYTLRKISELLLELVRTSDILGRYGGEEFCCILPETSFEQALVLAERCR 242 Query: 231 QLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 V + ++ +TV+ GV+ ++ LD +I RAD A+Y+ K+TGRNR Sbjct: 243 TQVAASQFSCTDHQSRVTVSIGVTDLHRDDTLDSIIKRADDALYQAKRTGRNR 295 >UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales RepID=A3WKT4_9GAMM Length = 364 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 92/161 (57%), Gaps = 3/161 (1%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGD 182 L + D LT L RR + E L+N AE N+ ++LLD+D FK VNDT+GH +GD Sbjct: 182 LRFYATTDPLTKLRNRRHMSELLKRALQNKHAEQRNVSVLLLDLDHFKSVNDTHGHEVGD 241 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI-THS 241 VLR A L RD++ V R+GGEEF++ + N A + RI + + + T Sbjct: 242 KVLRITADILRDTVRDHDKVSRWGGEEFLVFLPRTNLNHAAQVAERIRKAIAKYPWHTVI 301 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 +I +T + GVS P++ ++ ++ RAD A+Y GK+ GRN Sbjct: 302 NENIQLTTSIGVSELKPDDSVNTLVKRADDALYRGKEAGRN 342 >UniRef50_B2S4L8 Possible sensory transduction histidine kinase n=2 Tax=Treponema pallidum RepID=B2S4L8_TREPS Length = 387 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 85/135 (62%), Gaps = 2/135 (1%) Query: 161 LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDE 220 +++LDID FK +NDT+GHL GD+VL+ +A + S TR + RYGGEEF++++ + Sbjct: 251 VLMLDIDFFKQINDTHGHLCGDLVLQHVAEIIRSCTRPCDIASRYGGEEFMLMLSNNSSR 310 Query: 221 EACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFP-EEPLDVVIGRADRAMYEGKQT 279 EA RI + I + E I +TV+AGV+ P +E + +I RAD A+Y+ KQ Sbjct: 311 EAAHVAERIRVATEQLTIPYHEVSIRVTVSAGVAEYLPNQESAETLIKRADSALYQAKQN 370 Query: 280 GRNRCMFIDEQNVIN 294 GRN+ + I E+N+ + Sbjct: 371 GRNK-VVISEKNMCS 384 >UniRef50_A4BD76 GGDEF domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BD76_9GAMM Length = 476 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 92/158 (58%), Gaps = 2/158 (1%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 S +D LTGLP R+ D +L AE + L + ++DID FK +ND +GHL+GD VL+ Sbjct: 314 SMLDPLTGLPNRQGFDRRLSAELARAERYDQALSIAIIDIDFFKRINDEFGHLVGDKVLK 373 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 +A + R+ + + R+GGEEF++++ EE A ++ + V+ + +N Sbjct: 374 MMAKEMKRVCRESDFLSRFGGEEFVLLLPQTTLEEGLTAVDKLRRHVETRPFHYQNTPVN 433 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 +TV+AGV++ E L+ + RAD A+Y K+ GRNR Sbjct: 434 LTVSAGVAQRQVNETLESWLDRADAALYVSKREGRNRV 471 >UniRef50_C7HZA2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7HZA2_THIIN Length = 530 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 79/226 (34%), Positives = 114/226 (50%), Gaps = 20/226 (8%) Query: 62 GPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYK 121 GP+D VR++ S+ H+H +MLA FD + +L+ +TD K Sbjct: 314 GPVD------VRMLTSSGNHIH-----VMLAA-----SSLRFDN-KAAVLTSLVEITDRK 356 Query: 122 I--YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHL 179 LT + D LTG RR E + L++A L+L+D D FK VNDT+GH Sbjct: 357 QREQALTRMTQTDALTGFYNRRGFFERANALLQSARDQAPSLLLIDADHFKRVNDTHGHA 416 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 +GD VL LA + + R+ + + R GGEEF + + + E A RI V HA+ Sbjct: 417 VGDTVLVQLANRMNAALREGDVIGRIGGEEFAVFLPTTSLENAYELADRIRLSVSRHALR 476 Query: 240 HSEGHINITVTAGVSRAFP-EEPLDVVIGRADRAMYEGKQTGRNRC 284 + +T++ GV+ P E L+ +GRAD AMY+ KQ GRNR Sbjct: 477 IQGLRVPMTLSIGVTVLQPGESTLEAALGRADTAMYQAKQNGRNRV 522 >UniRef50_Q31IH0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IH0_THICR Length = 349 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 119/223 (53%), Gaps = 9/223 (4%) Query: 68 ELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL--L 125 E+ V + +A + + ++ AI +Q + +A QE + +A + K L Sbjct: 124 EVEKVSQLSTAQEMIDRLKSNVLPAIAS--YQ-SETNALQEQIQDSSAEIMRLKKELDKA 180 Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQLR--NAEPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 T + D LT +P RR +E ++ ++ N + + L++LDID FK VNDTYGHL+GD Sbjct: 181 TAIAKTDELTNIPNRRGFNEIIENMMKEANEKQSSFALLVLDIDFFKKVNDTYGHLVGDS 240 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHA--ITHS 241 +LR LA L + T+ +++ R GGEEF+ I+ + + + A + I + + + + ++ Sbjct: 241 ILRYLAKSLHNETKGKDSIARIGGEEFVAILPSTSYDSALKLANTIREKIASRPLHVKNN 300 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 I +T++ GV+ E LD + RAD+ +Y K GRNR Sbjct: 301 ANPITLTISIGVAMFQLNETLDSLFTRADKCLYMAKSNGRNRV 343 >UniRef50_C0N2C8 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2C8_9GAMM Length = 317 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 4/159 (2%) Query: 132 DVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTG+ RR + SF ++ A + N+ + ++DID FK +ND +GH GD VLR + Sbjct: 142 DELTGVLNRRAGNASFQVEMDRAIRKEQNVSIAMVDIDHFKKINDAFGHQTGDEVLRVFS 201 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 L R Y+ V RYGGEEF++I + N +EA R+ + V I H+ INIT Sbjct: 202 RVLRQTMRPYDIVCRYGGEEFMLIAEINNKDEASDLFERVRETVSTTQIRHANQTINITA 261 Query: 250 TAGVSRAFPEEP--LDVVIGRADRAMYEGKQTGRNRCMF 286 + GV P L ++ +AD A+YE K GRN+ + Sbjct: 262 SFGVHVVIPRTDMILKSLVQKADEALYEAKSAGRNKVII 300 >UniRef50_A0YDH5 Response regulator protein with GGDEF domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YDH5_9GAMM Length = 201 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/169 (41%), Positives = 92/169 (54%), Gaps = 10/169 (5%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 L I + +D LT + RR E L RN PL+L +L D+D FK +ND YGH Sbjct: 33 LEILTRIDPLTNISNRRAFYEVAGKLLSGFKRNKLPLSL--LLFDVDNFKKINDVYGHRY 90 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GDVVL+TLA + R + R+GGEEFIII N +E +I ++ N + Sbjct: 91 GDVVLKTLANEVRHSIRTTDCFARFGGEEFIIIFPQINADELLLISEKIRHVLQNSEVKT 150 Query: 241 SEGH-INITVTAGVSRAFPEEP--LDVVIGRADRAMYEGKQTGRNRCMF 286 +G IN TV+ G + F E LD+VI RAD AMYE K+ GRNR + Sbjct: 151 DKGDLINYTVSIGAT-TFRETDGNLDMVIQRADEAMYEAKKGGRNRVIL 198 >UniRef50_A8UWW7 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWW7_9AQUI Length = 540 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 110/195 (56%), Gaps = 17/195 (8%) Query: 102 HFDAFQEGLLSFTAALTDY------KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRN-- 153 F + +LS + Y +I + T ++ MD LTG+ RR DE F +L Sbjct: 347 EFGEIESAILSMAHEIEKYINVLSKEIEVYTSKAYMDSLTGVFNRRAFDE-FGRELIERF 405 Query: 154 ---AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEF 210 ++P+++ +++D+D FK VND++GH +GD VL L + R+ + V+RYGGEEF Sbjct: 406 LTLSKPISV--LMIDVDDFKRVNDSHGHQVGDQVLAELGRLIRETLRETDIVFRYGGEEF 463 Query: 211 IIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFP-EEPLDVVIGRA 269 + ++ + E A RAG ++ + V+ H+ G ITV+ GV++ +E + V+ RA Sbjct: 464 LALLPGTSLEGALRAGDKVRRRVEAHSF--PPGDQRITVSVGVAQGTEGDERAEDVVSRA 521 Query: 270 DRAMYEGKQTGRNRC 284 DRA+Y K+TG+NR Sbjct: 522 DRALYIAKKTGKNRV 536 >UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM24_DESAH Length = 488 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/164 (34%), Positives = 94/164 (57%), Gaps = 6/164 (3%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 LT ++ D LTG+ RR D D L R PL++ +L D+D FK VNDTYGHL Sbjct: 315 LTKMASTDKLTGVYNRRAFDIIIDQTLKEIQRKQTPLSI--ILFDLDHFKRVNDTYGHLA 372 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD +++T A R+ + + R+GGEEF+I++K + +A + +I V + + Sbjct: 373 GDYIIQTTVGTAARTIRNSDILCRWGGEEFLILLKGCDLGDAMKTAEKIRTAVASQPARY 432 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + I +T++ GV+ ++ + ++ RAD+A+Y K +G+NRC Sbjct: 433 GDDQICVTISVGVTEHTGQDTKETLLKRADKALYLAKASGKNRC 476 >UniRef50_B6BNQ1 Diguanylate cyclase n=2 Tax=cellular organisms RepID=B6BNQ1_9PROT Length = 565 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 95/169 (56%), Gaps = 11/169 (6%) Query: 125 LTIRSNMDVLTGLPGRRVLDE----SFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 LTI + D+L+GL RR E SF R E NL ++LLD+D+FK +NDTYGH Sbjct: 397 LTIEAKTDLLSGLHNRRYFSEMSQKSFLQAKRYEE--NLSIILLDLDKFKKINDTYGHQT 454 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD+V++ A L R+ + V RYGGEEFII++ N EA I + +++ I H Sbjct: 455 GDIVIKVTADILKYLNREDDIVARYGGEEFIILLPHTNLYEALVIAENIRKKIESTEI-H 513 Query: 241 SEGH--INITVTAGVSR--AFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 SE ++T + GV++ +E + I R D AMY+ KQ GRN+ Sbjct: 514 SESDDIFHVTASIGVAQLDTINDENISKTIQRCDNAMYKAKQRGRNKVF 562 >UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9R7Y4_AMMDK Length = 615 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 110/197 (55%), Gaps = 13/197 (6%) Query: 95 ENHWQDAHFDAFQEGLLSFTAAL-TDYKIYLLTIR-SNMDVLTGLPGRRVLDESFDHQLR 152 + ++ DA EG +S TAA+ + ++ L R S +D LT L RR L+E HQ+ Sbjct: 395 QPYFFDAETKRSIEGYVSITAAMIANLRLSELNRRLSLIDPLTQLYNRRFLEEYLTHQVV 454 Query: 153 NAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEF 210 A+ LN ++ +D+D+FK VND YGH +GD+ L LA + R+ + V RYGGEEF Sbjct: 455 EAQRLNRPFSILFIDVDQFKNVNDFYGHEVGDIALTLLAQTIKQNLREADAVVRYGGEEF 514 Query: 211 IIIVKAANDEEACRAGVRICQLVDNHAITHSEG-HINITVTAGVSR----AFPEEPLDVV 265 I ++ + E A +A ++ + V I G +I +TV+ GV++ PEE V Sbjct: 515 IAVLPGTDLEGAAQAAEKVRRAVAETPICLESGENIFLTVSIGVAQYRIGLNPEE----V 570 Query: 266 IGRADRAMYEGKQTGRN 282 I RAD AMY+ K G+N Sbjct: 571 IQRADEAMYQAKIKGKN 587 >UniRef50_C6MBI8 Diguanylate cyclase with GAF sensor n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBI8_9PROT Length = 411 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 61/168 (36%), Positives = 92/168 (54%), Gaps = 4/168 (2%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGHLIGD 182 L R D LTGL R + + Q++ A+ + ++++DID FK +NDTYGHL GD Sbjct: 236 LEQRVTHDALTGLFNRPGIFDILHKQIQRAKRGGYGIAIIMIDIDHFKAINDTYGHLTGD 295 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 VL +A L R +E + RYGGEEF+ I+ N + A +A R V I +E Sbjct: 296 AVLCEIANRLTQSARSHEYIGRYGGEEFLAIISPYNQDGALKAAERFRNAVACKEIKANE 355 Query: 243 GHINITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNRCMFID 288 +++T++ GV+ + E LD ++ +AD A+Y+ K GRNR D Sbjct: 356 TFVSVTISLGVAISAEAETLDEKWLLKKADEALYQAKHKGRNRVELAD 403 >UniRef50_B8GME9 Putative diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GME9_THISH Length = 306 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 95/165 (57%), Gaps = 5/165 (3%) Query: 129 SNMDVLTGLPGRRVLDESFDHQL---RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVL 185 + D LTGL R LD +L R + +L L+++DID FK +NDT GH GD VL Sbjct: 143 AQTDTLTGLYNRAALDHLLPRELAALRRGQQ-HLALLVVDIDHFKRINDTLGHSAGDQVL 201 Query: 186 RTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN-HAITHSEGH 244 + A L TR+ + ++RYGGEEF++++ + E+A AG RI +++ N A+ + Sbjct: 202 KAAADCLQEATRESDMLFRYGGEEFVMLMSTESPEDALLAGERIRRVLRNCEALQSAAPG 261 Query: 245 INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 +T + GV+ A P + + RAD+AMY KQ GR+R + +E Sbjct: 262 FTLTASIGVAMARPTDSAFSLFDRADQAMYTAKQAGRDRVVRSEE 306 >UniRef50_Q7MF60 GGDEF family protein n=69 Tax=Gammaproteobacteria RepID=Q7MF60_VIBVY Length = 348 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/160 (40%), Positives = 87/160 (54%), Gaps = 11/160 (6%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATY 191 D L+ L RR D L NA+ NL L+LLDID FK ND YGHL GD V+R +A Sbjct: 192 DGLSTLYNRRAFDSDL-KALVNAQQ-NLSLILLDIDHFKTFNDNYGHLFGDSVIRAIAKR 249 Query: 192 LASWTRDYETVYRYGGEEFIIIVK------AANDEEACRAGVRICQLVDNHAITHSEGHI 245 L + R+ YR+GGEEF +IV A E+ R + ++ D + E Sbjct: 250 LQTSCREGIAAYRFGGEEFALIVPNKSLRIARQYAESLRRTIEKLKVKDKRSGQQVE--- 306 Query: 246 NITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 NI+ + GV+ P+E + +I RAD+ +YE KQ GRNR M Sbjct: 307 NISASFGVAELKPDETAESLIERADKLLYEAKQLGRNRVM 346 >UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BW86_DESAD Length = 555 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 11/169 (6%) Query: 132 DVLTGLPGRRVLDES----FDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LTGLP RR L + D +R +P +L M++DID FK++NDTYGH +GD+VL+ Sbjct: 379 DQLTGLPNRRYLMKEGTRLVDIAIRAGQPCSL--MIMDIDHFKVINDTYGHTVGDIVLQQ 436 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 ++ R + + RYGGEEF+++ ++ + R+ Q V+ + E + Sbjct: 437 ISKAFQEVVRSSDIIARYGGEEFVVVAPGSDIDSGRTLAERLRQSVEARIFNNDEQPLTC 496 Query: 248 TVTAGVSR-----AFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 T++ GVS F + + ++ RAD A+Y+ K TGRNR + N Sbjct: 497 TISIGVSHYATDIKFGVDAYEDMLARADNALYKAKDTGRNRICIAEPHN 545 >UniRef50_B2J875 Diguanylate cyclase n=4 Tax=Cyanobacteria RepID=B2J875_NOSP7 Length = 340 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/189 (35%), Positives = 102/189 (53%), Gaps = 13/189 (6%) Query: 110 LLSFTAALTDYKIYLLTIRSN--------MDVLTGLPGRRVLDESFDHQLRNA--EPLNL 159 L T L + Y IR+N D LT L RR L+ Q++ A + +L Sbjct: 136 LAQLTVGLRKAQKYRDLIRTNDMLSAIALADSLTELNNRRALEWDLPRQIQRARTQKTSL 195 Query: 160 YLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAND 219 L++LD+D FK VNDT+GHL+GD +L+ L L R +T +RYGGEEF+I++ D Sbjct: 196 SLIILDVDHFKKVNDTHGHLVGDRILQILCQRLRHNLRCQDTAFRYGGEEFVILLANTTD 255 Query: 220 EEACRAGVRICQLVDNHAITHSEG-HINITVTAGVS--RAFPEEPLDVVIGRADRAMYEG 276 EEA R+ ++V + S INIT++ G + +A +E + ++ RAD+ + + Sbjct: 256 EEALLVARRLNRVVSDEPFALSNKLTINITISLGTASLQADDDEQGESLLNRADQCLLQA 315 Query: 277 KQTGRNRCM 285 K GRNR + Sbjct: 316 KNAGRNRVI 324 >UniRef50_A8FU11 Diguanylate cyclase n=9 Tax=Shewanella RepID=A8FU11_SHESH Length = 420 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%) Query: 128 RSNMDVLTGLPGRRVLDESFDHQ--LRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVL 185 ++N+D LTG+ RR ++ L+ + L L LLDID FK VNDTYGH +GD VL Sbjct: 252 QANLDYLTGVYNRRYFFSQYEELIILKKQKRGALTLALLDIDLFKGVNDTYGHDVGDEVL 311 Query: 186 RTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI 245 A L + TV R+GGEEFI+ + N+ ++ + +++ I+ S G + Sbjct: 312 VEFAARLKRSFGQHFTVSRFGGEEFIVAFRGLNEVKSFALMDKFRSQLESKPISTSRGEL 371 Query: 246 NITVTAGV---SRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 ++TV+AG+ S EE LD +I RAD+A+Y+ K+ GRN Sbjct: 372 SVTVSAGIASLSDDESEESLDTLIQRADKALYDAKEAGRN 411 >UniRef50_Q1PXD5 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXD5_9BACT Length = 483 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/161 (40%), Positives = 94/161 (58%), Gaps = 7/161 (4%) Query: 131 MDVLTGLPGRRVLDESFDHQLRNAEPLNLY--LMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 +D LT L RR ES + R AE + ++++DID FK NDTYGHL+GD VLR L Sbjct: 201 VDELTSLYTRRYFLESSQREYRQAERRGEFFSIIMVDIDHFKYFNDTYGHLLGDEVLRKL 260 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNH-AITHSEGHI-N 246 A+ L R + + RYGGEEFII++ N A + ++ ++ AI GH Sbjct: 261 ASVLKLNARQSDVIARYGGEEFIILLPGTNKPGAVASAEKLRSAIEKKLAIEVGGGHKEK 320 Query: 247 ITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNRCM 285 +T+TAGV+ +PE+ +V V ADR +Y GK++GRN+ + Sbjct: 321 VTITAGVA-CYPEDGNNVEEVTASADRFLYLGKKSGRNKIV 360 >UniRef50_UPI0001B9EDE1 diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EDE1 Length = 331 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 92/163 (56%), Gaps = 6/163 (3%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLR--NAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 SN D LTGL RR E + QL N + L L ++DID FK VNDT+GH GD VL Sbjct: 165 SNTDKLTGLKNRRFFQERLEEQLMQYNHNRIPLSLFIIDIDHFKRVNDTWGHGYGDEVLF 224 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 +AT L + + ETV RYGGEEF++I+ + E+A R+ + V + + + Sbjct: 225 DVATILKTHALEGETVARYGGEEFVMILPETDAEKAKAGAERLRRAVQDFSWKTG----S 280 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 +T++ G+ A P++ ++ +AD A+Y KQ GRN+ D+ Sbjct: 281 MTISIGIITANPDDNEATLLQKADEALYASKQNGRNQVTHYDD 323 >UniRef50_B8FL29 Response regulator receiver modulated diguanylate cyclase n=5 Tax=Bacteria RepID=B8FL29_DESAA Length = 593 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/186 (36%), Positives = 97/186 (52%), Gaps = 11/186 (5%) Query: 105 AFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLR----NAEPLNLY 160 A ++ L L KI ++I D LTGL RR +E D +++ N PL L Sbjct: 410 ALEKARLRKETRLAQEKIVDMSI---TDELTGLSNRRYFNEVVDIEVQKARNNGSPLTLC 466 Query: 161 LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDE 220 +M D+D FK VNDTYGHL GD VL L R ++ ++RYGGEEF +I+ + E Sbjct: 467 MM--DLDHFKNVNDTYGHLTGDKVLAETGALLKQGFRSHDMIFRYGGEEFAVILPDTDLE 524 Query: 221 EACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQ 278 A RA R + V H + + IT++ G++ E+ ++ +I AD A+Y K+ Sbjct: 525 HAKRACERFRESVQEHVMDAKVKQVKITISIGIANMPGEQIMEAGELIDAADHALYRAKE 584 Query: 279 TGRNRC 284 GRNR Sbjct: 585 LGRNRV 590 >UniRef50_Q1K364 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K364_DESAC Length = 284 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 90/161 (55%), Gaps = 8/161 (4%) Query: 131 MDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 +D L G+ RR +D + L+L ++L+D+D FK VNDTYGHL+GD VL L Sbjct: 109 LDPLLGIYNRRHMDRCLRSEADKTRRYALDLSVLLIDVDFFKKVNDTYGHLVGDRVLLAL 168 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI---THSEGHI 245 A + RD++ V+RYGGEE ++++ N A G R+CQ V ++ H + Sbjct: 169 AQMIKGSVRDFDMVFRYGGEEIMVLLPYTNSSGAQTLGSRLCQWVSERSLLEEVHQGQPV 228 Query: 246 N--ITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNR 283 N +T++ GVS P E ++ RAD A+Y K+ GRNR Sbjct: 229 NVQVTISIGVSTFDPAVEDEGEMVARADMALYRAKKNGRNR 269 >UniRef50_Q30UV1 Diguanylate cyclase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30UV1_DESDG Length = 436 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 100/179 (55%), Gaps = 7/179 (3%) Query: 110 LLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLD 165 ++ ++ + + + +L + D LTGL RR L + H + R EPL ++++D Sbjct: 241 MMGVSSMINERLVQMLEKEARTDPLTGLGNRRALYTAAAHHVARLHRLCEPL--VILVMD 298 Query: 166 IDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRA 225 +DRFK VND +GH GD +LR A L R + ++R+GGEEF+ +++ +++ A Sbjct: 299 LDRFKSVNDKFGHPAGDALLRHFAAILQKQFRGTDQLFRFGGEEFVALLQPSDERGAVCL 358 Query: 226 GVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRNR 283 R+ + V + I +TV+ G++ PEEP + +GRAD+A+Y+ K GRNR Sbjct: 359 AERLRREVAACPLQLGGASIAVTVSIGIANMLPEEPDITRALGRADQALYKAKAGGRNR 417 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/170 (38%), Positives = 103/170 (60%), Gaps = 12/170 (7%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 L +S D LTGL RR L+E+F +L R +PL+L +++D+D FK NDTYGH + Sbjct: 379 LRQQSIRDPLTGLYNRRYLEETFTRELARVQRRRQPLSL--LMIDVDHFKQHNDTYGHAL 436 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD +LR LAT+L + R + V RYGGEEF++++ + +A + + V+N A+T Sbjct: 437 GDTLLRRLATHLQRFFRTEDIVCRYGGEEFVVLLPECDAPQAQARAEALRRSVENLAVTS 496 Query: 241 SEGH-INITVTAGVSRAFPEE---PLDVVIGRADRAMYEGKQTGRNRCMF 286 ++ + +T++ G + ++P+ P D ++ RAD A+Y K GRNR F Sbjct: 497 NDAEFVALTISIGGA-SWPDHATTPED-LLARADAALYRAKHRGRNRVEF 544 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 96/166 (57%), Gaps = 9/166 (5%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAE----PLNLYLMLLDIDRFKLVNDTYGHL 179 +L +S D LTG+ RR L+ + ++ A+ PL+L ++ DID FK +ND++GH Sbjct: 610 MLLKQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSL--IMFDIDFFKHINDSFGHD 667 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 +GD VL+ +A ++ R+ + RYGGEEF+II E+A ++ L+ N Sbjct: 668 VGDKVLKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKILAEKLRSLIRN---L 724 Query: 240 HSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 H E IN+T + GV+ + + ++ RAD A+YE K+TGRN+ + Sbjct: 725 HFEEGINVTCSFGVASLEKHDTKETLLKRADEALYEAKKTGRNKVV 770 >UniRef50_Q1ZGY5 GGDEF domain protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGY5_9GAMM Length = 493 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 23/265 (8%) Query: 32 SVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELML 91 SV + K + ++S L Q + L N+ Y++ MD +ML Sbjct: 232 SVFNKKNQKLKDLQDNSSALYQKTENATDINTLKNEIFTYIKSMD------------VML 279 Query: 92 AIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIR-----SNMDVLTGLPGRRVLDE- 145 E+ +D + FQ+ + ++ + Y T++ +++D LT +P R E Sbjct: 280 KEQESKHEDDMQEKFQDMIRQIKELKSETQNYQKTLKQQSELAHLDFLTKIPNREAWSER 339 Query: 146 ---SFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETV 202 F R PL + ++D+D FK +ND +GHL GD V+ +A L R+ + + Sbjct: 340 LTFEFSRYQRYQNPLKI--AIIDMDHFKRINDQFGHLAGDKVINVVAQTLKKSLRNTDFI 397 Query: 203 YRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPL 262 RYGGEEF I++ +E+A ++C + + + +I+IT++ G + + + Sbjct: 398 ARYGGEEFAILLPEITNEQAVDVLQKLCAKIASIPFKFKKDNISITISIGCASFDKGDNI 457 Query: 263 DVVIGRADRAMYEGKQTGRNRCMFI 287 D RAD A+Y+ K GRN+ +F Sbjct: 458 DSAFERADNALYKAKNGGRNQVVFF 482 >UniRef50_Q5QV80 Intracellular signaling protein (PAS,GAF,GGDEF domains) n=1 Tax=Idiomarina loihiensis RepID=Q5QV80_IDILO Length = 462 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 121/258 (46%), Gaps = 36/258 (13%) Query: 41 PEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQD 100 P I ++ +G+ F R P E+ VR+M +A L I E Q Sbjct: 235 PLIINDQVWGVLGFARKSKRAEPFTELEIEMVRMMGTA----------LETVIAE---QK 281 Query: 101 AHFDAFQE----GLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQL-RNAE 155 D ++ L+++T D LTGL R E + L R Sbjct: 282 IRSDLIRQRDDMALIAYT-----------------DALTGLKNRSAGMEILEQSLVRQNG 324 Query: 156 PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVK 215 + ++D D FK +NDTYGH IGD VL + +++ R ++V R GGEEF++++ Sbjct: 325 GRGFVVSVIDFDHFKTINDTYGHDIGDKVLIAGSEAMSAAVRSSDSVVRVGGEEFMVVLA 384 Query: 216 AANDEEACRAGVRICQLVDNHAITHSEGH-INITVTAGVSRAFPEEPLDVVIGRADRAMY 274 A+ E A + R+ V+ +T G IN TV+ G S + P++ + + RAD+A+Y Sbjct: 385 YADHESASQVLERVRAAVEETVVTLDSGEVINPTVSVGASESHPDDDVSSIYRRADQALY 444 Query: 275 EGKQTGRNRCMFIDEQNV 292 + K+ GRNR ++ E +V Sbjct: 445 KAKREGRNRVVWASESDV 462 >UniRef50_C0QSI7 Diguanylate cyclase with GAF sensor n=1 Tax=Persephonella marina EX-H1 RepID=C0QSI7_PERMH Length = 423 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 138/281 (49%), Gaps = 26/281 (9%) Query: 17 KAIDAHYQWLVSMFHSVV-ARDASKPEITDNHSYGLCQFGRWID--HLGPL--DNDELPY 71 K I H W + + R+ EI +N C+ +D ++ L D+ ++ Sbjct: 150 KFIKEHLIWFFDLTSDIQNLREKPSIEIDENR----CKIKELLDPENVKVLLEDSKDIEQ 205 Query: 72 VRLMDSAHQHMHNCGRELMLAIVENHWQD--AHFDAFQEGLLS----FTAALTDYKIYLL 125 +R + H +H +E+ +I + + + + + +LS FT A+ I Sbjct: 206 LRFV---HTTIHENAKEIYASIKKKEYLKLLEAYISLVKNVLSMISIFTVAIARENIE-- 260 Query: 126 TIRSNMDVLTGLPGRRVLDESFDH--QLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 +S D LT L R V+D ++ + +LD+D FK +NDTYGH++GD Sbjct: 261 --KSRRDPLTDLLNRTVMDMIIARTIEISKISETPFSIAMLDVDNFKRINDTYGHIVGDC 318 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VL+ +A + R + V+RYGGEEF++++ + + + A R R + ++ +I Sbjct: 319 VLKEIAKIIKKSLRKSDFVFRYGGEEFLVLLPSTDSKHAYRIMERTRKNIEKASIKCDSH 378 Query: 244 HINITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRN 282 IN+T++ G+ +P+E L++ +I +AD+ +Y K+ G+N Sbjct: 379 KINVTISIGLITVYPDETLNIKQIIQKADQNLYTAKKKGKN 419 >UniRef50_Q21GT7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21GT7_SACD2 Length = 346 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 2/159 (1%) Query: 129 SNMDVLTGLPGRRVLDESFDHQL-RNAEP-LNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 +N D LTG+ RR + E D ++ R EP + + +LD+D FK +NDTYGH GD VL+ Sbjct: 183 ANRDELTGIANRRKIFEVLDTEVKRKREPNTAIGICILDVDHFKRINDTYGHQAGDEVLK 242 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 +A + R + RYGGEEF++I+ + + E R+ + V + Sbjct: 243 RIAEEVPKSLRTMDCFGRYGGEEFLLILPSTSLEGTEIKANRVREEVAKLEFKNLPPGEK 302 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 +T++ G++ FPEE +D I RAD+A+YE K GRN C+ Sbjct: 303 VTISIGIAEYFPEEEIDATIQRADKALYEAKAHGRNCCV 341 >UniRef50_A4A6D3 Membrane protein containing GGDEF domain n=1 Tax=Congregibacter litoralis KT71 RepID=A4A6D3_9GAMM Length = 399 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 121/224 (54%), Gaps = 20/224 (8%) Query: 77 SAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL------LTIRSN 130 +A +H+ R ML++ +WQ +A L T +L D + L LT +N Sbjct: 183 AASNGIHDTFRR-MLSL---NWQQ---EAMARELGQITNSLRDRNLQLQEARRQLTDLAN 235 Query: 131 MDVLTGLPGRRVLDESFDHQLRNAEPLNLYL--MLLDIDRFKLVNDTYGHLIGDVVLRTL 188 +D LTGL RR+++++ ++ A + +L +L+D+D FK NDTYGH GD VLR + Sbjct: 236 IDELTGLGNRRLVNQTLREEVNRARRSHGWLSVVLIDVDFFKKYNDTYGHPAGDEVLRRI 295 Query: 189 ATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN- 246 + T R E RYGGEEFI+++ A +A R R+ +LV I HS ++ Sbjct: 296 GDIMQRATARAGEVAARYGGEEFILVLPGAKAADALRTAERLKRLVYEENIPHSASEVSD 355 Query: 247 -ITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNRCMFI 287 I+++ GV P+E +D V++ RAD A+Y K+ GR++ + Sbjct: 356 RISISQGVLSIMPDEDVDPGVLVDRADAALYTAKREGRDQIAVV 399 >UniRef50_C4KD29 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Betaproteobacteria RepID=C4KD29_THASP Length = 634 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 95/165 (57%), Gaps = 8/165 (4%) Query: 132 DVLTGLPGRR----VLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D+LT LP RR L +++ R +PL++ M+LDID FK +ND++GH +GD VLR Sbjct: 467 DLLTNLPNRRSGMNALAKAWAASSRFEQPLSV--MMLDIDHFKRINDSHGHAVGDTVLRD 524 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 +A + R +++ R GGEEF++I + + A +A R+ ++V+ I E I Sbjct: 525 VAQAIQQSARKDDSMCRMGGEEFLVICPNTDLKAAVQAAERLRRMVERLRIQAGETEIQT 584 Query: 248 TVTAGV-SRAFPEEPLDVVIGRADRAMYEGKQTGRNR-CMFIDEQ 290 +V+ GV +R D ++ ADRA+Y KQ GRNR C+ + Q Sbjct: 585 SVSIGVATREVGMTETDALVNAADRALYRAKQAGRNRSCVVVQGQ 629 >UniRef50_B3E5L5 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E5L5_GEOLS Length = 300 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 57/164 (34%), Positives = 97/164 (59%), Gaps = 6/164 (3%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGD 182 L + S+ D LTG RR L + +L A + + +++LDID FK +ND +GH GD Sbjct: 136 LELLSHKDALTGAFNRRYLCHILNVELGRAARTDGMVSVLMLDIDHFKEINDRFGHQAGD 195 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 + L+ + + RDY+ +RYGGEEF++++ + EA + R+CQ V A +H Sbjct: 196 LALKKVTAEATACLRDYDLFFRYGGEEFVVMLPDTSKREALKVAHRLCQKVRAIAFSHIS 255 Query: 243 GHINITVTAGVSRAFPEE---PLDVVIGRADRAMYEGKQTGRNR 283 + ITV+ GV+ A+P+ ++ ++ AD+A+Y+ KQ+GR++ Sbjct: 256 PDLKITVSIGVA-AYPDNDVCSVEELLAHADQALYQAKQSGRDQ 298 >UniRef50_A6FEG5 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=A6FEG5_9GAMM Length = 620 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/170 (36%), Positives = 96/170 (56%), Gaps = 8/170 (4%) Query: 129 SNMDVLTGLPGRRVLDESFDH--QLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 S++D LT + RR D H + E + L+ D+D FKL ND YGH +GD VL Sbjct: 436 SSIDELTKIANRRTFDSKLQHYWSTHHREVKEMSLLFCDVDSFKLYNDNYGHPMGDTVLA 495 Query: 187 TLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI--THSEG 243 +A + R + V RYGGEEF +I+ ++E A R ++I V+N AI THS+ Sbjct: 496 NIAQVMDEQVHRGADLVARYGGEEFAVILPNTDEEGAIRLAIKIIAAVENLAIEHTHSKA 555 Query: 244 HINITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNR-CMFIDEQ 290 ++T++ GV+ PE+ ++ AD+A+Y K+ GRN+ C++ DE+ Sbjct: 556 AKHVTLSIGVATMCPEDESSEAQLLENADKALYLAKENGRNQYCVYRDEE 605 >UniRef50_A6DD54 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DD54_9PROT Length = 508 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 2/167 (1%) Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGH 178 K+ L+ D LT + ++ + E Q + + N ++ DID FK +NDTYGH Sbjct: 340 KVKKLSKEVKTDFLTNIANKKAIMEELKRQESSFKRYGTNYSVVFFDIDHFKNINDTYGH 399 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 GDV+L++L + RD + + R+GGEEF+ I+ N + AC+ ++ ++V+ Sbjct: 400 DAGDVILKSLGLLFKRYARDVDMIGRFGGEEFVAILPNTNIDGACKFAEKLRKIVEKTKF 459 Query: 239 THSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + IN+TV+ GV+ +D + AD +Y+ K++GRNR + Sbjct: 460 MYKNTRINVTVSGGVASRNETNSMDETLKLADERLYKAKRSGRNRIV 506 >UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KB78_CYAP7 Length = 547 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 115/237 (48%), Gaps = 22/237 (9%) Query: 67 DELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYK--IYL 124 D + V+ +D Q + N R L +N Q+ D F+ L+ T + +YL Sbjct: 310 DSMGLVKFVDQQWQPLCNLYRFYFLQ--QNLEQE---DIFEPRLIKLTQENKRLRKLVYL 364 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGD 182 D LTG+ RR D + + R E L LMLLDID FK NDTYGH +GD Sbjct: 365 -------DELTGIYNRRYFDHYLEREWRRMTREKAPLSLMLLDIDYFKNYNDTYGHQLGD 417 Query: 183 VVLRTLATYL-ASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 L+ +A + S R + V RYGGEEF II+ +++ A I + + + AI H Sbjct: 418 ACLKKVAQAIQKSLKRSTDIVARYGGEEFAIIISQCDNKGALFLAEIIREQIKSLAINHK 477 Query: 242 EGHIN---ITVTAGVSRAFP--EEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVI 293 +N +T + GV+ P E ++I AD A+Y+ K GRNR F + Q +I Sbjct: 478 NSQVNLKIVTASIGVATIIPALETQPKMLIQMADEALYQSKHEGRNRVTFRNNQPLI 534 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 6/158 (3%) Query: 129 SNMDVLTGLPGRRVLDES----FDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 + D LTG+ RR E R PL++ +M DID FK VNDTYGH +GD V Sbjct: 312 ATTDPLTGIANRRYALEQAALEIKRNQRTGTPLSVVMM--DIDHFKKVNDTYGHHVGDQV 369 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 L +A S R+ + V R+GGEEF+I++ + N A +I Q +++ + +EG+ Sbjct: 370 LMEVAQTCRSHCRESDLVSRFGGEEFLILLPSTNLNGAQTHAEKIRQAIEDLSFPTAEGN 429 Query: 245 INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 +++T + GVS+ E +D V+ RAD A+Y+ K GRN Sbjct: 430 VSVTASFGVSQWQGETKIDRVVSRADAALYQAKHDGRN 467 >UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6I5_BREBN Length = 530 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 81/231 (35%), Positives = 119/231 (51%), Gaps = 29/231 (12%) Query: 70 PYVRLMDSAHQHMHNCGR-ELMLAIVENHWQDAHFDAFQEGLLS--FTAALTDYK--IYL 124 P+V L + + GR E+ L+ HW + LLS ALT+ K Sbjct: 319 PFVSLANLVSK----AGRQEVELSEGSQHWNR------EAELLSRAIRFALTNIKKKTEQ 368 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 LT + D LTGL RR L+E+ + AE + +M++D+DRFK +NDTYGH GD V Sbjct: 369 LTHDARTDPLTGLTNRRTLEETMQKWM--AEQIPFSIMMMDLDRFKAINDTYGHQAGDEV 426 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 LR A ++S R + R+GGEEF+++V EEA + RI + ++ T+ G Sbjct: 427 LRHFAKIISSSLRPEDVSCRFGGEEFVVLVSHTGLEEAYQVAERIRRALETR--TNPIGQ 484 Query: 245 INITVTAGVSR-----AFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 +TV+ G++ PE L V AD AMY+ K+ GRN+ M +E+ Sbjct: 485 -RLTVSQGIAHYPSHAVSPEGLLHV----ADEAMYKAKRAGRNQTMIAEEE 530 >UniRef50_A0LIF2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIF2_SYNFM Length = 352 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/167 (38%), Positives = 90/167 (53%), Gaps = 7/167 (4%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 + +D LT + RR LD D + R E + L+L DID FKL NDTYGHL GD LR Sbjct: 183 ATLDGLTRVANRRSLDRFLDLEWRRTRRERAPMALILSDIDHFKLYNDTYGHLAGDDCLR 242 Query: 187 TLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI 245 +AT + R + V RYGGEEF +++ N + A IC+ V+N + H E Sbjct: 243 AVATAIKECAKRPMDLVARYGGEEFAVVLPNTNADGAVHIAETICREVENLRVRHPESST 302 Query: 246 N--ITVTAGVSRAFPEEPL--DVVIGRADRAMYEGKQTGRNRCMFID 288 +T++ GV+ P E + ++ AD A+YE K+ GRNR + D Sbjct: 303 GEFLTLSCGVAAMVPREESTPEALVAAADEALYEAKKQGRNRVVLKD 349 >UniRef50_Q5ZXI7 GGDEF domain protein n=4 Tax=Legionella pneumophila RepID=Q5ZXI7_LEGPH Length = 516 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 91/161 (56%), Gaps = 6/161 (3%) Query: 128 RSNMDVLTGLPGRRVLDE----SFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 R N D LTGLP R DE SF R++ L+L + DID FK +ND +GHL GD Sbjct: 355 RINHDSLTGLPNRESYDEHILDSFQRWKRSSSALSL--AVCDIDHFKRINDNFGHLAGDK 412 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VL+ +A S R + + R GGEEF+ I + + +EA ++ +LV++ + + Sbjct: 413 VLKKVAMIFKSSIRTVDFIARIGGEEFVFIFEQTSSKEAFGILEKLRKLVEDCLFYYRDK 472 Query: 244 HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 +++TV+ G++ E+ ++ + RAD AMY+ K G+NR Sbjct: 473 KVDVTVSFGLTTVTEEDDIESLFMRADNAMYKAKNAGKNRV 513 >UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIT1_HALO1 Length = 732 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 90/161 (55%), Gaps = 5/161 (3%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 + D LTGL R + L AE ++L D+D FK VNDTYGH IGD VLR Sbjct: 558 ATTDGLTGLTNHRTFQDRLVQLLDRAERTRQPAAILLCDVDHFKNVNDTYGHPIGDEVLR 617 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 +A L R + RYGGEEF ++++A + E A RI + V + +G Sbjct: 618 QVAGVLLRSVRKIDIPARYGGEEFAVVLEATDLEGAMNLAERIRKDVAALVVDSDKGPFQ 677 Query: 247 ITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNRCM 285 +T++ G++ +FP++ D V+I RAD A+Y K++GRNRCM Sbjct: 678 VTMSIGIA-SFPDDATDRAVLIERADSALYLAKESGRNRCM 717 >UniRef50_B3QH74 Diguanylate cyclase n=14 Tax=Bradyrhizobiaceae RepID=B3QH74_RHOPT Length = 355 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 12/204 (5%) Query: 91 LAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSN--MDVLTGLPGRRVLDESFD 148 L + Q A+ A +E L + + + ++ L IR+ D LTGL R+ D + Sbjct: 139 LVVTTREMQQAN-SALEERLSTSKQEIANLQVSLDAIRAESLTDPLTGLGNRKHFDRTVQ 197 Query: 149 HQLRNA----EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYR 204 +RNA +PL+L +M DID FK NDTYGHL GD VLR + L + + R Sbjct: 198 EAIRNAGASQQPLSLLMM--DIDHFKSFNDTYGHLTGDQVLRLVGMTLKQSIKGQDFTAR 255 Query: 205 YGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI-THSEGHI--NITVTAGVSRAFPEEP 261 YGGEEF +++ +A I +LV + + S G I +T++AGVS P + Sbjct: 256 YGGEEFAVVLPNTPMRQAIIVADNIRRLVMSKELKKKSTGEILGRVTLSAGVSTLKPNDD 315 Query: 262 LDVVIGRADRAMYEGKQTGRNRCM 285 + +I RAD +Y K+ GRNR + Sbjct: 316 AEALIERADACLYAAKRNGRNRVI 339 >UniRef50_B1Z7A7 Diguanylate cyclase n=1 Tax=Methylobacterium populi BJ001 RepID=B1Z7A7_METPB Length = 406 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 89/177 (50%), Gaps = 13/177 (7%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 S D LTGLP RR LD D L N ++ ++++DID FK ND+ GH GD+ LR + Sbjct: 229 SQTDALTGLPNRRALDLCLDAWLSNGG--SVAMLMIDIDHFKRFNDSLGHPEGDICLRRV 286 Query: 189 ATYLASWT--RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS----- 241 A LA+ T R+ RYGGEEF +++K A EA R + + V + H Sbjct: 287 AETLAASTFAREDCLCARYGGEEFAVVLKEAGRAEAARLADDLVRAVAALGLRHPGRRDM 346 Query: 242 ----EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVIN 294 I + T F E+P ++ ADRA+Y KQ GRNR + D V++ Sbjct: 347 YRIVTASIGVASTEPAGAGFREDPKAALVTMADRALYMAKQGGRNRAVVYDPPPVVS 403 >UniRef50_Q65IC8 GGDEF-domain containing protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65IC8_BACLD Length = 362 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 8/161 (4%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 S++D LTGL R D ++ + NA+ N L L+L+DID FK +NDTYGH GD +L+ Sbjct: 199 SSIDYLTGLNNVRQFDAIWNAHISNAKEKNEKLSLLLIDIDYFKTINDTYGHSNGDAILK 258 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHA--ITHSEGH 244 L T L R + V R GGEEF +I+ + +A R+ + V+ H I+HS+ Sbjct: 259 ELGTILKKSARSEDIVSRNGGEEFSVILPNCSHSQAAEIAERVRKEVETHTFFISHSK-K 317 Query: 245 INITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNR 283 I+ITV+ GV+ AFPE +I +AD+ +Y K GRNR Sbjct: 318 IHITVSIGVA-AFPEVIHSTGELIEKADQCLYRAKHLGRNR 357 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 + D LTG R L + + ++ ++ L L++ DID FK +NDTYGH IGD VL+ Sbjct: 185 ATTDPLTGAFNRYQLFKKLEEEIERSKRYGNHLSLIMFDIDNFKSINDTYGHNIGDQVLK 244 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 + + R +T+ R+GGEEF+II NDE A +I +LV + + EG Sbjct: 245 ITIDTIKNHIRKTDTLGRFGGEEFMIICPGINDEGARNIAEKIRKLVKDIKV---EGIPE 301 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNV 292 IT++ GV+ FP+E + I +AD A+Y K+ G+NR +NV Sbjct: 302 ITISVGVAEYFPDESITDFIKKADIALYSAKKKGKNRVEIYSSENV 347 >UniRef50_B8KHV5 Ggdef domain protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHV5_9GAMM Length = 449 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 72/241 (29%), Positives = 118/241 (48%), Gaps = 19/241 (7%) Query: 54 FGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSF 113 FG W+ H PL + P + + ++ C VE D+ + + GL + Sbjct: 213 FGAWLSHKAPLHFGDFPELDRIRGLVAELNGC--------VERQLSDSFKASDRSGLFAD 264 Query: 114 TAALTDYKIYL---LTIRS-----NMDVLTGLPGRRVLDESF--DHQLRNAEPLNLYLML 163 LTD +L L +S + D LT L GRR LD ++Q+ ++ L++ Sbjct: 265 VRRLTDQVCFLIDELAQKSQREMDSRDPLTSLYGRRFLDGILKRENQIAHSAGDAYSLLM 324 Query: 164 LDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEAC 223 +D+D FK VNDTYGH IGD VL+ +A L R + +RYGG+E ++++ +++ + A Sbjct: 325 IDVDDFKQVNDTYGHAIGDRVLKQVAKVLTHVVRQTDFAFRYGGDELLVVLTSSDIDAAR 384 Query: 224 RAGVRICQLVDNHAITHSEGH-INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 R I Q + + +G I I V+ GV+ + ++ RAD A+Y K G+N Sbjct: 385 RKADAILQSIRAAPVNLDDGRVIPIKVSIGVAEYRGHPDYETMLKRADEAVYAAKTAGKN 444 Query: 283 R 283 + Sbjct: 445 Q 445 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/160 (36%), Positives = 90/160 (56%), Gaps = 9/160 (5%) Query: 129 SNMDVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 + +D LTGL R E + ++ R+ PL++ +L DID FK +NDTYGH IGDVV Sbjct: 328 ATVDKLTGLFNRHKFQEIAEIEIKRSHRHKRPLSV--ILFDIDHFKKINDTYGHDIGDVV 385 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 LR LA + R Y+ R+GGEEF+I+ ++++A ++ + V++H Sbjct: 386 LRELAKIIKQNIRKYDYAIRWGGEEFLILTPETDEKQAFAMAEKLRKAVESHTFPEVG-- 443 Query: 245 INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 +T++ GV+ P E +D I +AD A+Y K GRN+ Sbjct: 444 -KVTISLGVASVDPNESIDQAIKKADNALYGSKLGGRNKT 482 >UniRef50_B5EIX9 Diguanylate cyclase n=2 Tax=Geobacter RepID=B5EIX9_GEOBB Length = 432 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 5/162 (3%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGHLIG 181 LL ++ D +TG+ RR E + + ++ L L L+ D+DRFK +NDTYGH G Sbjct: 262 LLQSQATTDPVTGILNRRKCCELLESAIMESKRYGLPLALIFFDVDRFKSINDTYGHDAG 321 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D VLR LA ++ R + R+GGEEF+++V + A +I V H+ H Sbjct: 322 DSVLRELAGLVSGMIRKTDIFSRFGGEEFVLVVHNNDGRTARMLAEKIRSRVSQHSFIHV 381 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 +T + GV+R +P++ + ++ RAD+AMY K GRNR Sbjct: 382 G---QVTASFGVARLYPDDSAESLVKRADQAMYSAKHAGRNR 420 >UniRef50_A6Q580 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q580_NITSB Length = 332 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/155 (37%), Positives = 91/155 (58%), Gaps = 5/155 (3%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATY 191 D LT L R L + +L L ++++DID FK +NDT+GH+ GD VLR L Sbjct: 177 DPLTNLYNRNALKKEI--KLLEEASLPYSVIIIDIDDFKKINDTFGHIAGDKVLRELGEI 234 Query: 192 LASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTA 251 ++ R VYRYGGEEF+II+ + + A + R+ +++ +H I +G NI VTA Sbjct: 235 FHTYVRKDSKVYRYGGEEFLIILLHTDIDGAKKLAQRLKEVISHHTIVLDDG-TNIIVTA 293 Query: 252 --GVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 G+++ +E + V+ RAD+A+Y+ K+ G+NR Sbjct: 294 SFGIAQKKGDESFERVLKRADQALYKAKRDGKNRV 328 >UniRef50_A4VQF4 GGDEF domain protein n=3 Tax=Proteobacteria RepID=A4VQF4_PSEU5 Length = 466 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 90/165 (54%), Gaps = 5/165 (3%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGD 182 L I+S D LTGL R LD F L A L +++LDID FK +ND +GH +GD Sbjct: 298 LRIKSQTDSLTGLANRAALDRRFATALEQARRYRRPLSIVMLDIDHFKRINDDFGHQMGD 357 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 VLR A L R + V R+GGEEF+++ + +A + R+C+ A + Sbjct: 358 RVLRDFAALLDDCLRGSDAVGRWGGEEFLVLCPETSGPQAVQFAERLCE--QARAFPFAT 415 Query: 243 GHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 G ++ T++AGV+ P + D ++ RAD A+Y K GR+R ++ Sbjct: 416 G-VSQTLSAGVAELSPSDTPDSLLRRADAALYRAKHEGRDRVCWL 459 >UniRef50_B9TK28 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TK28_RICCO Length = 248 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 6/159 (3%) Query: 131 MDVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 +D LTG+ RR +DE+F ++ R+ E L++ L LDID FK++ND +GH GD L+ Sbjct: 83 IDQLTGVLNRRGMDEAFSTEIARYRRSGELLSVAL--LDIDNFKMLNDQHGHAAGDSALK 140 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 LA+ + R + V R GGEEF++I+ N EEA R+ + + + + Sbjct: 141 HLASVVKRAVRPTDIVTRMGGEEFVVILPNTNLEEAVVTMSRLQRALTKEYFLGNNQKLL 200 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 IT +AGV+ E+ ++ ++ RAD+AMY K+ G+NR M Sbjct: 201 ITFSAGVALFKTEDDVNSILSRADQAMYLAKKRGKNRVM 239 >UniRef50_Q2RLY1 Diguanylate cyclase (GGDEF domain) n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLY1_MOOTA Length = 357 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 62/154 (40%), Positives = 91/154 (59%), Gaps = 4/154 (2%) Query: 132 DVLTGLPGRRVLDESFDHQLRN-AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLAT 190 D LTG+ R ++F + L + +P L +++LDID FK +ND YGHL G+ VL LAT Sbjct: 189 DDLTGIYNYRYFVQAFSNLLNSRQQPRYLAVLMLDIDYFKEINDAYGHLTGNRVLAELAT 248 Query: 191 YLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVT 250 L TR+ + V R+GGEEF +I+ + A + RI + + H I++TV+ Sbjct: 249 ILKECTREQDVVTRFGGEEFALILPDTDYHGALQVAERIRKAIAEHTFQAEGTAIHVTVS 308 Query: 251 AGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRN 282 AGV+ +P + D +I RADRA+Y+ K TGRN Sbjct: 309 AGVA-VWPVDGTDKKDIIARADRALYQAKTTGRN 341 >UniRef50_Q47HY8 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HY8_DECAR Length = 585 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 62/155 (40%), Positives = 85/155 (54%), Gaps = 2/155 (1%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTG RR L+E F + A L + L+DID FK +ND+ GH GD L LA Sbjct: 428 DQLTGTLNRRGLEEIFTKEAARATRHDTALCVALIDIDNFKKLNDSMGHDTGDQALIHLA 487 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 T R +TV RYGGEEFII++ + ++A A R+ + + H + IT Sbjct: 488 TICRETLRPQDTVARYGGEEFIILLPETSLDDAAIALTRLQRELTKKFFLHGNEKVLITF 547 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 +AGV++ P + VI RAD AMY+ K+TG+NR Sbjct: 548 SAGVTQMLPNDTQATVIKRADEAMYQAKKTGKNRV 582 >UniRef50_A2PB03 Chemotaxis protein n=2 Tax=Vibrio cholerae RepID=A2PB03_VIBCH Length = 605 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 62/160 (38%), Positives = 94/160 (58%), Gaps = 12/160 (7%) Query: 132 DVLTGLPGRRVLDESFDHQ------LRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 D LTGLP R F H L N+ E N + +LDID+FK +ND+YGH+ GD Sbjct: 445 DFLTGLPNRNSF---FQHAELIFNLLNNSVNEKDNTCIAILDIDKFKDINDSYGHVYGDS 501 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 +L+ +A L+ RD + + R GGEEFII++KA N A + R ++++ H+ S+ Sbjct: 502 ILKQMADLLSKQFRDIDILARMGGEEFIILLKATNLPLAFKIIERCREIIEKHSFNLSDE 561 Query: 244 HINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRN 282 +N+T++AG+++ E + LD I AD +YE K+ GRN Sbjct: 562 TVNLTISAGLAQFSKEYKTLDEWIHAADCKLYESKRCGRN 601 >UniRef50_Q1H013 Diguanylate cyclase (GGDEF domain) n=2 Tax=Methylophilaceae RepID=Q1H013_METFK Length = 487 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 67/178 (37%), Positives = 92/178 (51%), Gaps = 5/178 (2%) Query: 116 ALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVN 173 AL Y+ L T+ + D LTGLP RR D D L E L +LLD+D FK +N Sbjct: 310 ALRRYQDKLETM-ATTDTLTGLPNRRAFDVVIDVFLNENERARSTLAFILLDVDHFKSIN 368 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 D GHL GD VL +A + TR + + R+GGEEF+I +K ++ A +I + Sbjct: 369 DRLGHLGGDYVLTVVARIIKGNTRAADFICRWGGEEFLIAIKDCDEHNALLLAEKIRSAI 428 Query: 234 DNHAITHSEGHINITVT--AGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 +N I + + IT + GV A E L+ V+ RAD+AMY K GRN+ D Sbjct: 429 ENELIAYQGSQVAITASLGVGVGVARAGEKLEPVLERADKAMYAAKAAGRNQVQLGDS 486 >UniRef50_A1TX96 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TX96_MARAV Length = 339 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 92/163 (56%), Gaps = 5/163 (3%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 + +D LTG+ RR +DE D NAE L L+LLDID FK +ND YGH +GD VL Sbjct: 166 ATIDPLTGVKNRRSMDEELDVAAANAERSGLPYALVLLDIDHFKKINDEYGHGVGDDVLT 225 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 L L S TR + ++RYGGEEF++++ D RA + Q V + H G Sbjct: 226 ELVALLESNTRRSDQLFRYGGEEFVLLLPGV-DGVNLRAVMNNLQQVLRKYLKHPGGP-- 282 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 +T + GV+ E +D + RAD A+Y K+TGR+R ++ +E Sbjct: 283 VTASFGVALLGHGESVDSWLARADNALYTAKETGRDRIVYAEE 325 >UniRef50_Q1N6U5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N6U5_9GAMM Length = 564 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 63/179 (35%), Positives = 103/179 (57%), Gaps = 5/179 (2%) Query: 108 EGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLD 165 EG ++ A + K L + S+ D LTG+ R L+E H++ A+ L+ +++LD Sbjct: 386 EGKVAKRTAELEQKNEELRLLSSTDRLTGVYNRMKLEEQIQHEISRAQRYKLDYSIVMLD 445 Query: 166 IDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRA 225 +D FK VND++GH +GD VL+ A L + R+ + V R+GGEEFII N + A Sbjct: 446 VDYFKNVNDSFGHQVGDRVLKMFAVELQNNVRESDVVGRWGGEEFIISCSCTNADNAFSL 505 Query: 226 GVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 ++ +++++ + G I T + GVS+ E+ L+ +I RAD A+YE K+ GRN+ Sbjct: 506 AEKLREIIEH--LDFGSG-IACTASFGVSQYQLEDSLESLISRADNALYESKRMGRNKV 561 >UniRef50_A8FZW4 Sensory transduction system, regulatory protein n=4 Tax=Shewanella RepID=A8FZW4_SHESH Length = 546 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 95/172 (55%), Gaps = 11/172 (6%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 S D LT +P RR DE+ + A E + LM++DID FKL NDTYGHL GD LR Sbjct: 359 SQTDGLTKIPNRRCFDETLQALWQKAIREESKIGLMMIDIDHFKLYNDTYGHLAGDQCLR 418 Query: 187 TLATYLA-SWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQL-VDNHAITHSEGH 244 +A L+ + + + V RYGGEEF++++ D C + + CQ ++ + H+ Sbjct: 419 EVAQALSQTLNLNTDLVARYGGEEFVVLLPDTRD---CLSPAKRCQYNIERLGLPHNSSL 475 Query: 245 IN--ITVTAGVSRAFPEEPLDVV--IGRADRAMYEGKQTGRNRCMFIDEQNV 292 + ITV+ GV+ P + D+V +AD A+YE K +GRNR F + V Sbjct: 476 TSEFITVSIGVASISPTQDSDLVDLTTQADLALYEAKNSGRNRVCFFKPKPV 527 >UniRef50_A1K902 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K902_AZOSB Length = 610 Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 89/159 (55%), Gaps = 6/159 (3%) Query: 132 DVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LTG R+ LDE+ ++ R+ PL L LLD+D FK +NDTYGH GD LR Sbjct: 452 DPLTGALNRKGLDEALAREIARARRHGSPL--CLALLDVDNFKQLNDTYGHRAGDDALRH 509 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 L + + R + V RYGGEEF+I++ + E+A VR+ + + + + I Sbjct: 510 LFSVIREAVRPQDAVGRYGGEEFLIVLPDTDTEQAAAVVVRLQRELTRRFFLANSQKLLI 569 Query: 248 TVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 T +AG++R +E + I RAD+AMY K+ G+NR + Sbjct: 570 TFSAGIARLHADEDPQLAIDRADKAMYAAKRAGKNRVLI 608 >UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVW7_DESBD Length = 572 Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 72/242 (29%), Positives = 122/242 (50%), Gaps = 14/242 (5%) Query: 54 FGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAH----FDAFQEG 109 F ++ H+ P +DE + ++A H EL + V+ + FD ++G Sbjct: 322 FNLFMHHIHP--DDEPAFRENFEAAQATGHEFTTELRIRTVQGEERHVSLVCGFDLLEDG 379 Query: 110 ----LLSFTAALTDYKIYLLTIR--SNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYL 161 L A +T+ ++ L + +N D LTGLP RR E ++ + +L + Sbjct: 380 SMFRLHGAMADVTERRLAELRLERLANTDELTGLPNRRHFLECVRAEMTRSRRFGKSLCV 439 Query: 162 MLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEE 221 ++DID FK VNDT+GH +GD+ LR +A + R + V R GGEEF ++ A Sbjct: 440 AMVDIDDFKKVNDTHGHGVGDLALRHVAQTINGLRRAVDVVGRLGGEEFCVLFPEAGLAA 499 Query: 222 ACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGR 281 A R+ + + + H + + +TV+ G++ +E LD ++ R+D A+YE K+TG+ Sbjct: 500 GITAAERVRKALAEAVLEHGDLRLRLTVSIGLAEYSGDESLDGLLRRSDEALYEAKRTGK 559 Query: 282 NR 283 NR Sbjct: 560 NR 561 >UniRef50_B4SPL2 Diguanylate cyclase n=3 Tax=Stenotrophomonas RepID=B4SPL2_STRM5 Length = 471 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 37/263 (14%) Query: 42 EITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDA 101 + +DN S +FG W H G +P G+ ++A ++ H Q A Sbjct: 210 QASDNASLATSEFGLWFTHKG------IPSF----GESSETQQVGQ--LMARIDGHLQRA 257 Query: 102 HFDAFQEGLLSFTAALTDYKIYLLTIRSNM--------------DVLTGLPGRR----VL 143 DA + L A D L IR+ M D LT L RR VL Sbjct: 258 SGDAPAQRLAVLPAIRED----LAAIRTLMTLLFERIGELDAGSDALTNLLNRRFLPTVL 313 Query: 144 DESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVY 203 + RN P +L +LLD+D FK +ND +GH GD L+ +A L TR + ++ Sbjct: 314 RREIELATRNRTPFSL--LLLDLDHFKAINDGHGHDAGDRALQHVAGVLGQLTRGSDYLF 371 Query: 204 RYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI-NITVTAGVSRAFPEEPL 262 RYGGEEF++++ AA++ +A + + + + + G + ++T + GV+ Sbjct: 372 RYGGEEFVVVLVAASESQAAVIAESLRRQIAKSPVPLANGQVLSLTASIGVAGHDGHPDY 431 Query: 263 DVVIGRADRAMYEGKQTGRNRCM 285 + ++ RAD AMYE K++GRNR + Sbjct: 432 ERLMARADAAMYEAKRSGRNRVV 454 >UniRef50_Q12JJ7 GGDEF domain n=1 Tax=Shewanella denitrificans OS217 RepID=Q12JJ7_SHEDO Length = 580 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 64/155 (41%), Positives = 86/155 (55%), Gaps = 5/155 (3%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLNLYL--MLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTGL RR L + NL L +LDID FK VNDTYGH GD VL + A Sbjct: 422 DPLTGLSNRRAGTVETGAYLSRFKQDNLALSVAILDIDFFKRVNDTYGHSRGDEVLISFA 481 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 L + R + +YR+GGEEF+++ A+ A + R+C + A H EG IT Sbjct: 482 RLLKATVRPSDRLYRWGGEEFLVLFPGADIAAATQVCERLCHTI---ASKHFEGVGRITS 538 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + GV+ A ++ LD ++ RAD A+Y+ KQ GRNR Sbjct: 539 SLGVTEASLDDSLDSLVSRADVALYQAKQQGRNRV 573 >UniRef50_B1ZIK5 Diguanylate cyclase n=5 Tax=Methylobacterium RepID=B1ZIK5_METPB Length = 360 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 68/166 (40%), Positives = 90/166 (54%), Gaps = 22/166 (13%) Query: 132 DVLTGLPGRRVLDESFDHQLRNA-------EPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 D LTGL R+ +FD LR+A L++LDID FK +ND +GH GD V Sbjct: 193 DTLTGLANRK----AFDQFLRDAITRTRADSGSTFCLIMLDIDHFKGLNDRHGHRFGDQV 248 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV-----DNHAIT 239 LR LA L+ T D + RYGGEEF I++ E AGV + QLV + Sbjct: 249 LRLLARLLSEKTTDRDLAARYGGEEFAIVL----GEAGIGAGVALAQLVCDRLRGQRLVK 304 Query: 240 HSEGHI--NITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 G + +T++AGV++ P E VI RADRA+YE K+TGR+R Sbjct: 305 RGSGEVVAQVTISAGVAQYRPGEAARDVIERADRALYEAKRTGRDR 350 >UniRef50_B9Z7N2 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z7N2_9NEIS Length = 515 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 88/158 (55%), Gaps = 5/158 (3%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 SN D LTGL RR LD D + +P + +++DID FK VND+YGH GD L L Sbjct: 360 SNTDALTGLGNRRELDSVLDDWKYSRQPFAV--LMIDIDFFKSVNDSYGHDTGDQALTAL 417 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 A + R+ + V R GGEEF++++ A+ A R R+C V+ + + G +T Sbjct: 418 AQLMRDSAREGDVVCRMGGEEFVMLLPGADAIGAERVAERLCSRVEAYRVP---GLPALT 474 Query: 249 VTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 V+ GV+ +E + ++ AD A+Y+ KQ GRNR + Sbjct: 475 VSIGVAAGIADETPEALLREADDALYQAKQQGRNRVVL 512 >UniRef50_C0N2Q7 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2Q7_9GAMM Length = 344 Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 23/185 (12%) Query: 120 YKIYLLTI-RSNMDVLTGLPGRRVLDESFDHQL-RNAE-----------------PLNLY 160 Y YL I ++ D LTGL R LD L R ++ + + Sbjct: 137 YSNYLSLIEKTQKDKLTGLYNRETLDNEITKVLVRQSDHFAQEISSSNDSRRRSFAIKYW 196 Query: 161 LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASW-TRDYETVYRYGGEEFIIIVKAAND 219 L +LDID FK++ND+YGHL GD V+ +A ++S RD + VYRYGGEEF++++KA N+ Sbjct: 197 LGVLDIDHFKVINDSYGHLYGDEVIILVARLMSSGCIRDDDLVYRYGGEEFVVLLKAPNE 256 Query: 220 EEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQT 279 E+A RI +++ H + +T + G ++ VIG+AD A+Y KQ Sbjct: 257 EDAAHTFNRIREMISEHEFPQLK---QVTTSIGFVEVLGQQSPSDVIGQADEALYYAKQN 313 Query: 280 GRNRC 284 GRN+ Sbjct: 314 GRNQV 318 >UniRef50_A8FVJ0 Sensory box/GGDEF domain protein n=2 Tax=Shewanella RepID=A8FVJ0_SHESH Length = 422 Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 63/185 (34%), Positives = 95/185 (51%), Gaps = 10/185 (5%) Query: 108 EGLLSFTAALTDYK-----IYLLTIRSNMDVLTGLPGRRVLDE---SFDHQLRNAEPLNL 159 EG FTA + D + L + N D LTGL R LD S ++ + Sbjct: 236 EGETEFTAIIRDVSQRTQLLDELKFKLNTDYLTGLRNRNYLDHKLISMSNRFKRY-GFRF 294 Query: 160 YLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAND 219 L+++D+D FK +NDTYGH++GD +L+ A + R+ + + R+GGEEF +I+ Sbjct: 295 SLLMIDLDHFKQINDTYGHMVGDQILKCFADAATALLREGDKIARFGGEEFAVILPGTEL 354 Query: 220 EEACRAGVRICQLVDNHA-ITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQ 278 A R+C+ + A I E I TV+ GV PE+ + ++ RAD A+Y+ K Sbjct: 355 YAAKLTATRLCKHISEQAFIGPDEKVIPFTVSIGVVEFEPEDDVKSIMNRADEALYKAKV 414 Query: 279 TGRNR 283 GRNR Sbjct: 415 GGRNR 419 >UniRef50_UPI00018273A4 hypothetical protein EcanA3_10568 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI00018273A4 Length = 513 Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 18/189 (9%) Query: 108 EGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDID 167 E +LS T + ++ D LTG RR D + N +P L L+DID Sbjct: 335 ESMLSHTIQSNKERELAYVRQATHDALTGCKNRRAFDNDMAELMNNHQPFAL--ALVDID 392 Query: 168 RFKLVNDTYGHLIGDVVLRTLATYLASWTRDYE-TVYRYGGEEFIIIVKAANDE------ 220 FK +NDT+GHL GD+VLR +A + + +VYRYGGEEF +I +A E Sbjct: 393 NFKSINDTWGHLSGDIVLRNVAREGLQVMQPHSVSVYRYGGEEFAVIFQAERSEASRQLL 452 Query: 221 EACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTG 280 EA R+ V + E ++++T +AG+ + EPL+ +GR D A+Y+ KQ G Sbjct: 453 EAWRSAVEQREW--------REDNLHVTFSAGLGE-WQFEPLEQFVGRVDAALYQAKQQG 503 Query: 281 RNRCMFIDE 289 +NR + E Sbjct: 504 KNRILLTSE 512 >UniRef50_C1SHV7 Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHV7_9BACT Length = 396 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 11/198 (5%) Query: 99 QDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNM---------DVLTGLPGRRVLDESFDH 149 + D + + + L DYK + +++++ D LT L R+ +D Sbjct: 197 KKGRLDTINKEYTTVNSELEDYKKQVSKLQNDLNKYKTESITDHLTSLYNRKYMDIKMTE 256 Query: 150 QLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGG 207 ++ +N +ML+DID FK VND YGHLIGD VL+ LA L R + +RYGG Sbjct: 257 EIDRYRRMNTSFCIMLVDIDYFKNVNDNYGHLIGDQVLKHLAKLLKDSIRKTDFAFRYGG 316 Query: 208 EEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIG 267 EEF+I++ + A +I + + + E N+T + G++ ++ + VI Sbjct: 317 EEFLIMLTNVDVRNATHVAEQIRKKLKETNFSLKENSFNVTASFGIALFEKDDTQESVIK 376 Query: 268 RADRAMYEGKQTGRNRCM 285 RAD +Y+ KQTGRN+ + Sbjct: 377 RADERLYKAKQTGRNKIV 394 >UniRef50_B1Y8B1 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y8B1_LEPCP Length = 636 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 58/154 (37%), Positives = 86/154 (55%), Gaps = 2/154 (1%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LT + RR L FD + E +L + LLDID FK +ND+ GH GD L+ LA Sbjct: 479 DQLTQIANRRGLLRCFDAERARVERESADLAIGLLDIDNFKRLNDSLGHQTGDEALKFLA 538 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + R +T+ RYGGEEF++++ +EA R R+ +L+ + +T Sbjct: 539 RRVGEALRPTDTLARYGGEEFVVLLPGTPSDEAQRVLTRVQRLLSAELFMYEGKQSFVTF 598 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 +AGV+ P E ++V + RAD A+YE K+TG+NR Sbjct: 599 SAGVTLYRPSEAIEVALQRADEALYEAKRTGKNR 632 >UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QU32_CHLT3 Length = 606 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 2/154 (1%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTGL RR DE F+++ R L + + DID FK VND + H +GD VL+ +A Sbjct: 450 DGLTGLANRRHFDEQFEYEFRRTRRYKRPLSIAMSDIDFFKKVNDNFSHQVGDEVLKKVA 509 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + R + V RYGGEEF+ I N E A RA +I + ++++ ++ + +T+ Sbjct: 510 SIFRENVRAGDLVARYGGEEFVFIFTETNKESAIRAAEKIRKAIEDYDWSNVHAGLKVTI 569 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 + GV+ + D +I AD +YE K+ GRN+ Sbjct: 570 SIGVAEDAGFDGCDELIAAADSKLYEAKRNGRNQ 603 >UniRef50_A9HIT0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HIT0_GLUDA Length = 602 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 59/156 (37%), Positives = 92/156 (58%), Gaps = 2/156 (1%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 +N D LTGLP RR + D Q+ A + +LD+D FK +ND YGH IGD+VLR + Sbjct: 432 ANTDELTGLPNRRAFFQVLDGQMAAAS-SVVAAAMLDLDHFKSINDKYGHPIGDIVLRRV 490 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG-HINI 247 AT + + RD + V R GGEEF +++ + + + A R+ + V +I G + + Sbjct: 491 ATVVRATLRDTDMVARIGGEEFAVLITSESRDRAISLIRRVVRAVSAESIDLPTGVRLQV 550 Query: 248 TVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 T++AG++ E + ++ RAD+A+Y K+TGRNR Sbjct: 551 TISAGIACREAGEDRNALMSRADQALYVAKRTGRNR 586 >UniRef50_Q6MPU8 GGDEF domain protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPU8_BDEBA Length = 320 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 7/176 (3%) Query: 116 ALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVN 173 A+T+ +Y R+ D LTG + L + ++ AE LN L+ DID FK +N Sbjct: 147 AMTNAAMY---DRAQKDALTGAHSKGALLDKGPEAMKRAEVLNEPFSLVTFDIDHFKKIN 203 Query: 174 DTYGHLIGDVVLRTLA-TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQL 232 D+YGH GD VL+ L + R + RYGGEEF++++ + + A G RI Q Sbjct: 204 DSYGHPGGDYVLKELCRIVITKLIRSNDFFARYGGEEFVLLLSGSPSKTAGEVGERIRQT 263 Query: 233 VDNHAITHSEGHINITVTAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRNRCMFI 287 ++ H T I +T++ GV+ P E V RAD+A+Y+ KQ GRNR + Sbjct: 264 IEAHDFTFEGKKIPVTISVGVATKLPNETEWTQVYDRADKALYQSKQGGRNRTTIV 319 >UniRef50_C4KBG4 Diguanylate cyclase n=1 Tax=Thauera sp. MZ1T RepID=C4KBG4_THASP Length = 614 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/157 (40%), Positives = 85/157 (54%), Gaps = 2/157 (1%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTG RR LDE F + A+ L + LLDID FK +ND+ GH GD L LA Sbjct: 453 DQLTGALNRRGLDEMFQTESARAQRRGTRLAVALLDIDHFKKLNDSLGHKGGDDALVHLA 512 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + R + + RYGGEEF+I++ D +A +A VR+ + + I IT Sbjct: 513 KVVRQHLRPQDVLARYGGEEFVILLPETGDTDAQQALVRLQRELTREFFMAEMQKIVITF 572 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 +AGV+R E L+ + RAD AMY+ KQ GRNR M Sbjct: 573 SAGVTRLAEGESLESALKRADGAMYQAKQAGRNRVMV 609 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 2/162 (1%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 + D LTGL RR E +L + + ++LDID FK VND YGHL+GD VL Sbjct: 133 ATTDPLTGLYNRRFFFEQAQRELERVQRNETDASFIILDIDHFKKVNDEYGHLVGDDVLE 192 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 LA R + R+GGEEF+I + + E A R + V+ + +G ++ Sbjct: 193 GLAKLFKETFRKVDLCCRFGGEEFVICLPDTDTEGALLVAERTRKKVEELSFNTEKGPLH 252 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 +T++ GVS A L+ ++ RAD A+Y+ KQ GRNR +D Sbjct: 253 VTISLGVSSANENTTLEDMLKRADDALYQAKQNGRNRTESLD 294 >UniRef50_Q30NZ2 Diguanylate cyclase (GGDEF domain) n=2 Tax=Campylobacterales RepID=Q30NZ2_SULDN Length = 249 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 103/190 (54%), Gaps = 16/190 (8%) Query: 107 QEGLLSFTAALTDYKIYLLTIRSNM-------------DVLTGLPGRRVLDESFDH-QLR 152 QE + S +AL + L++R ++ D LTGL R L++ + + Sbjct: 49 QEAVFSIISALIITLLLFLSLREDLKKINIKAHNYAFTDGLTGLYNRHYLNDFLEKFNIL 108 Query: 153 NAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFII 212 E ++ +DID+FK +NDT GHL GD +L++LA L T+D + + RYGGEEF+I Sbjct: 109 QKENSMFAVIFIDIDKFKEINDTIGHLAGDCILKSLALRLKYLTQDADILCRYGGEEFVI 168 Query: 213 IVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRA 272 I ++E + +I + + N +I E H+NIT++ G+S ++ V+ AD A Sbjct: 169 ICSDISEENIVQKAQKIREEIQN-SIFECE-HVNITISIGLSFGKKGCDINSVLNEADEA 226 Query: 273 MYEGKQTGRN 282 +Y K++GRN Sbjct: 227 LYMAKKSGRN 236 >UniRef50_B6BKB0 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKB0_9PROT Length = 427 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/284 (26%), Positives = 135/284 (47%), Gaps = 29/284 (10%) Query: 20 DAHYQWLVSMFHSV--VARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDS 77 ++H +W++++ + D PE+ N LC+FG+W+ + ++++ Sbjct: 153 ESHIKWILNLILYIERSVYDNDYPELNPN----LCEFGKWMHSATTSYLISTTHFKVIEK 208 Query: 78 AHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKI-------YLLTIR-S 129 H ++H+ A V NH Q+ + D L+ + Y + +L I S Sbjct: 209 LHMNLHDLA-----ANVVNHCQNNN-DPRPSTLIHLMQRIDYYSLEIGNEIAFLNEIEES 262 Query: 130 NMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LT L RR+ ++ ++L A+ LM+ D+D FK VND+YGH +GDVVL+ Sbjct: 263 AKDPLTHLLTRRLFNKIMLNKLDIAKATGREFALMMCDLDHFKRVNDSYGHAVGDVVLKH 322 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 ++ L R + ++R+GGEEF++++ + +EA ++C + + + I Sbjct: 323 FSSILEEILRKSDYIFRFGGEEFMVLLPMTDKKEALILAQKVCDAIVASEVIVEDITIKY 382 Query: 248 TVTAGV-------SRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 TV+ G S +E +D I + D +Y K+ GRNR Sbjct: 383 TVSIGTISIIIDNSVVIGQEAIDKYITQVDERLYLAKERGRNRV 426 >UniRef50_B9QXQ9 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QXQ9_9RHOB Length = 398 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/155 (38%), Positives = 86/155 (55%), Gaps = 6/155 (3%) Query: 132 DVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LTG+ R + + +L R PL +++ D+D FK +ND +GHL GD VLRT Sbjct: 238 DALTGVLNRGAIFNLLESELCKAARTQAPL--VVIMADLDHFKSINDRFGHLAGDEVLRT 295 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 +A + R Y+ V RYGGEEF+I++ + A RI V N I H +G I Sbjct: 296 VAATIKDTLRGYDHVGRYGGEEFLILLSGTDTNMAVDVAERIRGTVANLEIMHKDGPIRP 355 Query: 248 TVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 T++ G++ + P + VI RAD A+Y+ K+ GRN Sbjct: 356 TISQGLALSDPSGTAEQVIARADAALYKAKEDGRN 390 >UniRef50_C0QDC5 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDC5_DESAH Length = 305 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 86/157 (54%), Gaps = 7/157 (4%) Query: 132 DVLTGLPGRR----VLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LTGL R L + R PL++ +LLDID FK NDT+GHL GD VL T Sbjct: 140 DGLTGLYNSRHFFCQLKAEIERYTRYHHPLSV--LLLDIDLFKNYNDTWGHLEGDKVLMT 197 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT-HSEGHIN 246 + + S R +T YRYGGEEF +++ EEAC G RI ++ T E Sbjct: 198 MGEIITSCLRSNDTAYRYGGEEFTVVLPETRVEEACLVGERIRGILSQRVFTPEKEKTAK 257 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 +T++ G ++ + L+ I RAD+AMY+ K+ GR++ Sbjct: 258 VTISIGATQFSTSDTLESFIKRADKAMYDSKKAGRDQ 294 >UniRef50_A6LUB1 Diguanylate cyclase n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LUB1_CLOB8 Length = 512 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/153 (37%), Positives = 88/153 (57%), Gaps = 1/153 (0%) Query: 132 DVLTGLPGRRVLDESFDHQLRN-AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLAT 190 DVLTG+ R+ + ++ ++ ++ L+++DID+FK +NDTYGH GDVVL+ + Sbjct: 352 DVLTGVYNRKYFYKIAKEKIEACSDKKHMSLLMMDIDKFKNINDTYGHPTGDVVLKKVMN 411 Query: 191 YLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVT 250 + RYGGEEF+I++ AN E+A G I + ++N I H I IT + Sbjct: 412 ICKELLGKKYYIGRYGGEEFLILLDNANSEKALEIGETIRRRIENLEILHDNKCIKITSS 471 Query: 251 AGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 G+ + E L+ +I AD+A+YE K GRNR Sbjct: 472 FGIFTSVRERDLENMIKFADKALYEAKSLGRNR 504 >UniRef50_C0Z4E1 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4E1_BREBN Length = 306 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 5/161 (3%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 DVLTGLP RR+L E LR A+ + + LD DRFK +NDT+GH GD+ L+ LA Sbjct: 145 DVLTGLPNRRLLSEKLQQALRAAQSKEEMVAALYLDCDRFKEINDTWGHDTGDLFLQMLA 204 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 T L S RD + V R GG+EF+I++ + E L + I + Sbjct: 205 TRLKSSVRDGDIVARLGGDEFVIVLTGIHSERQVEKIANRILLATQEPWMIEDRTIPFST 264 Query: 250 TAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNRCMFID 288 + G++ +P + ++ AD+A+Y+ K+TGRNR F D Sbjct: 265 SIGIA-LYPASASEAEQLLSNADKALYQAKKTGRNRFFFFD 304 >UniRef50_D0KW78 Diguanylate cyclase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KW78_HALNC Length = 460 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/155 (37%), Positives = 83/155 (53%), Gaps = 2/155 (1%) Query: 132 DVLTGLPGRRVLDE--SFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTGLP R DE + + E L L L D+D FK VNDT+GH GD L + Sbjct: 299 DTLTGLPNRLAFDERVALEAARMQREKTPLCLALWDVDYFKRVNDTFGHQAGDKALHVVG 358 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 L+ RD + V RYGGEEF++++ A+ ++A RI + + A + + IT+ Sbjct: 359 KTLSQLIRDVDMVARYGGEEFVMVLPKADLQQAFVVLERIREKLAGTAFRFKDTPLKITL 418 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + GV+ E ++ V+ RAD A+Y K GRNR Sbjct: 419 SCGVAEFGAGETIESVMARADEALYRAKSNGRNRT 453 >UniRef50_A6VYW5 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VYW5_MARMS Length = 714 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/167 (37%), Positives = 98/167 (58%), Gaps = 13/167 (7%) Query: 132 DVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LTGL RR E +H++ +N EPL+L ++ DID FK NDTYGH GD L+T Sbjct: 553 DELTGLKNRRFFSEVMEHEITAAEQNQEPLSL--LICDIDYFKTFNDTYGHPAGDEALKT 610 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI-- 245 LA+ L+ + + V R GGEEF++++ E+ R + V+ I + EGH+ Sbjct: 611 LASLLSPFFYEGNIVCRLGGEEFVVVMPRVKREDCLRKAEELRAAVEKTQIEY-EGHLLE 669 Query: 246 NITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNRCMFIDEQ 290 NIT++ G+S ++PE D + + D A+Y+ K++GRN C+ + E+ Sbjct: 670 NITISIGIS-SWPELISDPRQLFQQTDSALYQAKESGRN-CIRVTEK 714 >UniRef50_A1S6F8 Diguanylate cyclase n=2 Tax=Shewanella RepID=A1S6F8_SHEAM Length = 355 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 4/171 (2%) Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 +I L++ S D LTGL RR + + + P L+++DID FK NDT+GH Sbjct: 186 EITELSVISLTDKLTGLNNRRAFESRLAQEFLPSTP-KCSLLVIDIDHFKQFNDTWGHNA 244 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VL +A L + + V RYGGEEF+I++K + E+A ++ + N +T Sbjct: 245 GDKVLVYVAQNLKQAVKGEDLVARYGGEEFVIVLKDTSAEDAANIAEKLRDRIANKKLTL 304 Query: 241 SEGHIN---ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + +++ ++V+ GV++A+ E + RAD A+Y K TGRNR D Sbjct: 305 KKDNLDLGKVSVSIGVAKAYANETPEQFFERADGALYRAKGTGRNRVCLAD 355 >UniRef50_A8GJ51 Diguanylate cyclase n=1 Tax=Serratia proteamaculans 568 RepID=A8GJ51_SERP5 Length = 370 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 91/163 (55%), Gaps = 5/163 (3%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGD 182 L+ +N D LTG+ RR D FD L L L+LLD+D FK ND YGH GD Sbjct: 203 LSKLANRDPLTGIANRRYFDNYFDAVLLRESTLQAPFSLILLDVDFFKKYNDHYGHQQGD 262 Query: 183 VVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 L LAT L S T R + V RYGGEEFII++ ++ EA + RI L+ A+ H+ Sbjct: 263 ECLTRLATCLESATRRSQDLVARYGGEEFIILLPKSDAGEAVQVAKRIEGLLAGLAMPHA 322 Query: 242 EGHIN--ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 + +TV+ GV++ P + + ++ AD+A+Y K+ GRN Sbjct: 323 ASEVAQWVTVSQGVAQWQPGQNREQLLAAADQALYRAKELGRN 365 >UniRef50_B2TQF1 Ggdef domain protein n=3 Tax=Clostridium botulinum RepID=B2TQF1_CLOBB Length = 695 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 98/162 (60%), Gaps = 11/162 (6%) Query: 132 DVLTGLPGRRVL----DESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LTG+ R V+ + F+++L + ++ +++D+D FK +ND YGH IGD+VLR Sbjct: 533 DSLTGMFNRNVILTQGERIFNNKLETKQTFSI--IMIDVDYFKQINDRYGHDIGDIVLRD 590 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH--SEGHI 245 +++ + S R+ +++ RYGGEEF+I++ N EEA + RI + V+N+ + SE H Sbjct: 591 ISSIIKSEIRNTDSLGRYGGEEFLILLPNINLEEAKKIADRIRKSVENYKYHYLTSEKHN 650 Query: 246 NITVTAGVSRAFPEEPLDVVIG--RADRAMYEGKQTGRNRCM 285 +T++ GV F + D G +AD+A+Y K GRNR + Sbjct: 651 RVTLSLGVYE-FNKNEFDFFEGVKKADKALYMAKSLGRNRAI 691 >UniRef50_Q3ICC3 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3ICC3_PSEHT Length = 511 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 5/188 (2%) Query: 103 FDAFQEGLLSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQ--LRNAEPLN 158 FD + S LT YK L +S +D LT LP R DE ++H+ L N + + Sbjct: 322 FDKINNRIGSLENKLTKYKKRLNDQRFKSLLDSLTKLPNRAAFDERYNHEMHLFNVQASD 381 Query: 159 LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAN 218 + L+++D+D FK +ND +GH GD+ L+ +A L + + RYGGEEF++++ + Sbjct: 382 VTLVVIDVDYFKSINDRFGHTAGDITLQVIAKALQKSIEKTDFIARYGGEEFVLLMPGTS 441 Query: 219 DEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQ 278 E A ++ + + + I ITV+ G ++ + L RAD A+YE K Sbjct: 442 LEHAIPQLEKLKKNIKKIPFKFKDKQIEITVSLGATQFKQGDTLLKAFDRADDALYEAKN 501 Query: 279 TGRNR-CM 285 GR+R C+ Sbjct: 502 AGRDRLCI 509 >UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VQQ9_PSEU5 Length = 466 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 107/218 (49%), Gaps = 32/218 (14%) Query: 98 WQDAHFDAFQE---------GLLSFTAALTDYKIYLLTIR------------------SN 130 W AFQE G++S ++ I+LL+ R +N Sbjct: 248 WPTDFMAAFQERKTLLTVSAGVISLALSVVALLIFLLSSRYFQSIARLRLAHGQLAQLAN 307 Query: 131 MDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 DVLTG+ RR + +L A N L L++LDID FK VND +GH IGD VL+ Sbjct: 308 TDVLTGVSSRRAFLAGLEAELARARRHNESLSLLMLDIDHFKRVNDVHGHPIGDAVLKQF 367 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 + A R ++ + R GGEEF I++ + E A +I V + + G I +T Sbjct: 368 SETCAGMLRAHDLLGRLGGEEFAIVLPHTDAEGARCVAEKIRTAVAQTPMPTAAGDITVT 427 Query: 249 VTAGVSR--AFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 V+ G+++ P E +D ++ RAD+A+YE K+ GRN+ Sbjct: 428 VSIGLAQMEGLPGE-VDQLMARADQALYEAKRGGRNQV 464 >UniRef50_A4G283 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G283_HERAR Length = 475 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/166 (37%), Positives = 91/166 (54%), Gaps = 10/166 (6%) Query: 128 RSNMDVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 +++ DVLTG RR DE+F H+ R PL++ LDID FK VNDTYGH GD Sbjct: 307 KTHRDVLTGAHNRRYFDEAFKHEFAVASRQGWPLSV--AFLDIDHFKQVNDTYGHAAGDK 364 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 L L+ +A+ R + RYGGEEF+++ EEA RI Q V ++ T+ Sbjct: 365 ALIALSRIIATQIRGSDIFVRYGGEEFVLLFPGTVAEEALIVLNRIRQAVASYCHTYDTA 424 Query: 244 HINITVTAGVSRAFPE----EPLDVVIGRADRAMYEGKQTGRNRCM 285 ++T++AG++ E E + ++ AD A+Y KQ GRN+ + Sbjct: 425 TFHLTISAGLAFHMDEDMKHETAEGLLRTADNALYTAKQNGRNQII 470 >UniRef50_B2UHC7 Diguanylate cyclase n=2 Tax=Ralstonia pickettii RepID=B2UHC7_RALPJ Length = 448 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 2/158 (1%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D+LTG R+ L+E+ + ++ A N L + LDID FK +NDT+GH GD L LA Sbjct: 291 DLLTGALNRKGLEEALEREVARAARQNTALCIAFLDIDDFKAINDTHGHSFGDDALSHLA 350 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 R +T+ R+GGEEF+I++ + EE + VR+ + + + + IT Sbjct: 351 QVARESMRPQDTLARFGGEEFVILMPDTSLEEGVQTIVRLQRALTQRFFAAGDTRLFITF 410 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 +AGV+ EP I RADR MY+ K+ G+N+ + + Sbjct: 411 SAGVAEVGKNEPPMAAIQRADRGMYQAKRAGKNKVVSV 448 >UniRef50_D0KF92 Diguanylate cyclase n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KF92_PECWW Length = 489 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 6/161 (3%) Query: 129 SNMDVLTGLPGRRVLDE---SFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVL 185 SN D LTG+ RR L++ + + +R+ E + L++LDID FK +NDTYGH +GD V+ Sbjct: 314 SNHDALTGMLNRRSLNQHMMNIINSIRDGENKMMSLLVLDIDHFKKINDTYGHAVGDNVI 373 Query: 186 RTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH- 244 R +T + TR + + R+GGEEF+II++ + E RI +++ ++ S GH Sbjct: 374 RGFSTAIKQHTRPQDLLCRWGGEEFLIIIQGLSKNECLEIAERIRTIIEGSSLAISNGHA 433 Query: 245 INITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNR 283 + T + GVS E D AD+ +Y K+ GRNR Sbjct: 434 VRCTTSIGVSFFHLERIEDFHDAFKEADKLLYIAKEQGRNR 474 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/192 (34%), Positives = 107/192 (55%), Gaps = 11/192 (5%) Query: 109 GLLSFTAA---LTDYKIYLLTIR--SNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYL-- 161 G LS A+ +TD + L I+ + D LTGLP R +L + + L A LN ++ Sbjct: 603 GPLSILASAIDITDKRKTELQIKKLAYFDSLTGLPNRTLLKDHMELALGQARRLNKFVAV 662 Query: 162 MLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAND-E 220 +LLD+D FK +NDT GH GD+++R++A L + R +T+ R+GG+EF++++ +D + Sbjct: 663 LLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCDTLARWGGDEFVLLLTDLDDIQ 722 Query: 221 EACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQ 278 A + L+ SE IN T + G++ +P++ D ++ RAD AMYE K+ Sbjct: 723 NTTSATEKFMALLTERPFATSECDINTTASIGIA-LYPQDGQDPETLLKRADTAMYEAKK 781 Query: 279 TGRNRCMFIDEQ 290 GRN F Q Sbjct: 782 NGRNGYHFFSLQ 793 >UniRef50_A6TMF8 Diguanylate cyclase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TMF8_ALKMQ Length = 512 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/179 (36%), Positives = 102/179 (56%), Gaps = 10/179 (5%) Query: 111 LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLD---ESFDHQLRNAEPLNLYLMLLDID 167 L + DY I L IR+ D LTGL R D E+F + +++ E ++ ++++DID Sbjct: 335 LGLVISKIDY-IANLRIRAKYDGLTGLFNRHTFDTIYEAFYNGIKH-EKMDFAILMVDID 392 Query: 168 RFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGV 227 FK VND YGH +GD VLR +A + RD++ + RYGGEE III+K +N EA Sbjct: 393 NFKEVNDQYGHPVGDEVLRKMARAMQQSLRDHDVIARYGGEEMIIILKGSNPPEAKGIAE 452 Query: 228 RICQLVDNHAITHSEGHINITVTAGVSR-AFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 RI + +++ I I ITV+ G++ + D +I AD+ +YE K+ G+N+ + Sbjct: 453 RIRKSIESLEIQ----GIRITVSIGMANFRYDSYEKDELITIADKCLYEAKRKGKNQFL 507 >UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IJX5_PSEHT Length = 621 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 94/165 (56%), Gaps = 17/165 (10%) Query: 132 DVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTG+ RR D+ +LR + E L +++LDID+FK++NDTYGHL GD V+RT A Sbjct: 451 DPLTGIKNRRFFDKKLVMELRRSRREQTPLSVIMLDIDKFKVINDTYGHLTGDQVIRTAA 510 Query: 190 -TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH---- 244 T R + V RYGGEEF++++ ++ A +I HAI + H Sbjct: 511 DTIKKQLQRPLDEVARYGGEEFVVLLPNTQNDGAIAIAEKI-----RHAIATNNVHVAGT 565 Query: 245 -INITVTAGVSRAFPEE---PLDVVIGRADRAMYEGKQTGRNRCM 285 I+ T++AGV + E+ P ++ RAD+A+Y KQ GRN+ + Sbjct: 566 TISFTISAGVYTSVAEDINNP-EIFTERADKALYFAKQHGRNQVI 609 >UniRef50_B6BGM9 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGM9_9PROT Length = 334 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/157 (35%), Positives = 91/157 (57%), Gaps = 5/157 (3%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTGL R LD+ D ++ L + ++ +DIDRFK +NDTYGH IGD VL++ + Sbjct: 181 DKLTGLYNRVKLDKVLDLEINKMVKLQAEISIIFIDIDRFKPINDTYGHQIGDKVLQSFS 240 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 L + R + V R+GGEEF+II AN E + + ++++N + + + +T Sbjct: 241 QVLKNNIRKTDIVGRWGGEEFLIICHEANIEGSLHLAENLRKIIENTSFEYIK---ELTA 297 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + GV+ + +D ++ RAD+A+Y+ K GRN+ F Sbjct: 298 SFGVASFEDGDSIDSLVERADKALYKAKHNGRNKVCF 334 >UniRef50_C6XBE1 Diguanylate cyclase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBE1_METSD Length = 606 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/175 (37%), Positives = 94/175 (53%), Gaps = 5/175 (2%) Query: 119 DYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTY 176 D + LT++S+ D LTGL RR E+ + + A+ +M++DID FK VNDTY Sbjct: 419 DELVKTLTLQSSTDFLTGLKNRRGFYEAANIEYARAQRHACESCIMIIDIDHFKTVNDTY 478 Query: 177 GHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNH 236 GH GD L + L +R ++ R+GGEEFI ++ +N EE C +I L+ Sbjct: 479 GHSAGDWALTFIGGILKDNSRIHDISARHGGEEFICMLGNSNLEEGCLFAEKIRTLIQAA 538 Query: 237 AITHSEG--HINITVTAGV-SRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + I +TV+ G+ S F PLD++I +ADRA+Y K GRNR D Sbjct: 539 MVDIGPDLRPIKLTVSIGITSSQFQHPPLDMMIEQADRALYMAKNLGRNRVQRFD 593 >UniRef50_A1SZ67 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZ67_PSYIN Length = 409 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 89/158 (56%), Gaps = 3/158 (1%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 S +D LT L RRVL + L N L++ D+DRFK +NDTYGH +GD VL ++ Sbjct: 244 STVDPLTKLINRRVLFRLAANDLEKQS--NFCLIMFDLDRFKRINDTYGHGVGDKVLVSI 301 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH-INI 247 A + R + V R+GGEEF+ I+ E+A R G RI +++ ++ ++G I Sbjct: 302 AQVIQRELRQSDIVARFGGEEFVAILPEIGLEQATRIGQRIRRMISQESVQLTDGLVIKT 361 Query: 248 TVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 T + GV++ E LD + RAD +Y K+ GRN+ + Sbjct: 362 TSSIGVTQKRVNESLDETLKRADDFLYYAKENGRNQVV 399 >UniRef50_Q089V9 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q089V9_SHEFN Length = 426 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 95/180 (52%), Gaps = 7/180 (3%) Query: 113 FTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDH----QLRNAEPLNLYLMLLDIDR 168 F ALT +Y + +N D LTGL R L + LRN L LM+LD+D Sbjct: 229 FGNALTRL-VYKVARLANKDQLTGLWNRHSLLNKLEEVDALWLRNG--LAYSLMVLDLDH 285 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK +NDTYGHL GD+VL+ A L R + V RYGGEEF+II+ N +EA + Sbjct: 286 FKRINDTYGHLAGDMVLKNTADILQKSLRKIDFVCRYGGEEFLIILPLTNKKEAQIVAEK 345 Query: 229 ICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + Q ++ + + + HIN T++ G + ++ ++ AD AMY K GRN +D Sbjct: 346 VQQKINENTVLWQKTHINTTLSIGYATCKTHLSIEQLLQLADDAMYLAKSKGRNTICSMD 405 >UniRef50_Q1RHW0 Regulatory components of sensory transduction system n=15 Tax=Rickettsia RepID=Q1RHW0_RICBR Length = 457 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 87/158 (55%), Gaps = 4/158 (2%) Query: 132 DVLTGLPGRRVLDESFDH--QLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTGL RR D + N E + LYL++ DID FK VNDTYGH GD VL T + Sbjct: 298 DGLTGLFNRRYFDVHIKQIVEKANKEGMKLYLLMCDIDNFKHVNDTYGHQAGDKVLITTS 357 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD--NHAITHSEGHINI 247 L + R + + R+GGEEF I++ N ++A R+ ++ N I E + Sbjct: 358 RILKNTFRVTDLIARFGGEEFTILLNDINIDQAIYTAERVRVKIESMNFQIDEQEKPLKK 417 Query: 248 TVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 TV+ GV+ E ++ I R+D+AMYE K TG+N+ + Sbjct: 418 TVSIGVTEYKKCESIEEFIERSDKAMYEAKTTGKNKVV 455 >UniRef50_A8FRI3 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FRI3_SHESH Length = 578 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/169 (33%), Positives = 92/169 (54%), Gaps = 6/169 (3%) Query: 128 RSNMDVLTGLPGRRVLDE---SFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 ++ +D LTGL RR E SF Q R + + ++++DID FK +NDTYGH +GD V Sbjct: 406 QAKIDPLTGLKNRRAFYEITPSFWKQKRTR--VGVSMIIIDIDYFKAINDTYGHTVGDEV 463 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 L AT L R + V R+GGEEFI+++ +EA +C+ + HA Sbjct: 464 LVQFATLLNKNLRQQDIVARWGGEEFILLLPKTRLKEASTISKHLCESISKHAFIADRNE 523 Query: 245 INITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCMFIDEQNV 292 + +T + G++ P + L+ +I AD+ +Y KQ G+N+ + + +V Sbjct: 524 LQVTASIGLAHGSPAQFTLEQLISLADQQLYRAKQRGKNQISYENSPDV 572 >UniRef50_D2R0A0 Diguanylate cyclase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0A0_9PLAN Length = 352 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 82/156 (52%), Gaps = 2/156 (1%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 + D LTGL RR D+ F +L + L L+L+D+D FK VND YGH GD VL+ Sbjct: 131 ARTDALTGLANRRAFDDEFARRLSQWKRHGTALMLVLVDVDHFKPVNDQYGHQAGDAVLK 190 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 L L++ RD + V RYGGEEF I++ + E RI Q + + H + Sbjct: 191 QLGKLLSAAVRDTDLVARYGGEEFAILLVDSGIEGGAITIARIQQAIASSTFRHEGVALR 250 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 IT + G+++ + +I RAD A+Y K GRN Sbjct: 251 ITASFGLAQPSASDDQKQLIARADEALYAAKHGGRN 286 >UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dickeya zeae Ech1591 RepID=C6CKY4_DICZE Length = 463 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 92/167 (55%), Gaps = 7/167 (4%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIG 181 LL + + D LTG+ RR DE + H R E + L L+++DIDRFK ND+YGH G Sbjct: 285 LLQVLAQTDSLTGIANRRHFDERYQHLWRQQESMQKPLSLLMIDIDRFKRFNDSYGHSKG 344 Query: 182 DVVLRTLATYLASWTRDYETVY-RYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 D ++++ LA+ E + RYGGEEFI+++ + +A R Q V++ I H Sbjct: 345 DACIKSVVETLAAQLPSSECLLGRYGGEEFIMVLPETDHRQALILAERCRQAVESMEIPH 404 Query: 241 SEGHIN-ITVTAGVSRAFPEE---PLDVVIGRADRAMYEGKQTGRNR 283 ++ +TV+ GV+ A P E + + AD+A+Y K GRNR Sbjct: 405 TKSPQGVVTVSIGVAAAKPGETGSSMTQLSNDADQALYRAKHQGRNR 451 >UniRef50_C0QMB4 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic substrate binding component n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QMB4_DESAH Length = 404 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 91/161 (56%), Gaps = 9/161 (5%) Query: 132 DVLTGLPGRRVLDESFDHQ----LRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LTGL RR D++F+++ +RN +++ ++ DID FK VND +GHL GD LR Sbjct: 207 DGLTGLYNRRYFDDAFEYEWNRAIRNRTAISI--VMCDIDYFKRVNDAFGHLAGDAYLRL 264 Query: 188 LATYLASWTR-DYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 A L R + + V RYGGEEFI ++ + E RI Q+++N A+T I Sbjct: 265 TADVLKQVVRRETDIVARYGGEEFIFLIPDDSLENTVGLAERIRQMMENTALTFDGQIIR 324 Query: 247 ITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCM 285 TV+ GV+R P E + ++ AD AMY+ K GRNR + Sbjct: 325 ATVSLGVARLSPRPFEKKETIVSNADNAMYQAKSRGRNRVV 365 >UniRef50_C7LTV4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTV4_DESBD Length = 335 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 83/157 (52%), Gaps = 3/157 (1%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 S D LTGL R ++ A N L L ++DID+FK NDTYGHL GD VL Sbjct: 174 SLTDELTGLYNARHFFRQVQAEVERATRYNSPLSLCVIDIDKFKRYNDTYGHLCGDAVLA 233 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH-I 245 L + RD ++ YRYGGEEFII++ EEA R RI H+ + Sbjct: 234 ELGRLIQKLIRDADSAYRYGGEEFIIVLPETPREEAARVAERIRTTFFEHSFYPKNAQGV 293 Query: 246 NITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 +++++ GV+ P E + ++ RAD+ MY K+ GRN Sbjct: 294 HVSLSLGVTSYCPGESVSDLVDRADQNMYAAKKCGRN 330 >UniRef50_A6DCT5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCT5_9PROT Length = 610 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 98/180 (54%), Gaps = 9/180 (5%) Query: 110 LLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRF 169 LL F +K Y +S +D LT R++++ + ++ L++ DID F Sbjct: 188 LLIFYMNFFIFKFYKEKFQSLIDPLTNTYNRKIINRIENENIKKTA-----LLIFDIDNF 242 Query: 170 KLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRI 229 K +NDTYGH IGD+VL+ L + S R + + RYGGEEF++I+ ++A + +I Sbjct: 243 KKINDTYGHNIGDIVLKNLTQTIKSQIRSNDYLIRYGGEEFLLILNNIEQKDALKKIEKI 302 Query: 230 CQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNR-CMF 286 + N I + IT++ GV PE+ ++ I +AD+ +Y+ K+TG+N+ C++ Sbjct: 303 FNTIRNTPINIGNKKLFITISGGVHLE-PEKEKNIFEAIKKADQELYKAKRTGKNKYCIY 361 >UniRef50_D1B7Z4 Sensor protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7Z4_THEAS Length = 917 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/153 (37%), Positives = 91/153 (59%), Gaps = 2/153 (1%) Query: 132 DVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTGL RR + E + ++ + E +L + ++DIDRFK +NDTYGHL GD VLR +A Sbjct: 757 DQLTGLLNRRAVIEMEEREMARSVREGGSLSVAMMDIDRFKAINDTYGHLAGDQVLREVA 816 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + S R Y+ V RYGGEEF++I+ A+ +A R R+ + + + + I +T Sbjct: 817 RRVGSKLRVYDVVGRYGGEEFLLILPGASLGDAKRLCERMRSAIGSEPVLYDGLQIPVTA 876 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 + GV+ P+ +D + AD+A+Y K +GR+ Sbjct: 877 SFGVAEFVPQLTVDQLNNLADQALYLAKASGRD 909 >UniRef50_Q1GXZ8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GXZ8_METFK Length = 599 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/155 (39%), Positives = 84/155 (54%), Gaps = 6/155 (3%) Query: 132 DVLTGLPGRR----VLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LTG RR L+ FD R+A L+L +M DID FK +ND GH GD L Sbjct: 437 DFLTGTLNRRGMEQALEREFDRARRHATRLSLAMM--DIDHFKRLNDRLGHATGDKALVH 494 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 L+ L + R + + RYGGEEFIII+ + EA R + + + H+ + I Sbjct: 495 LSKVLKASLRSTDVLARYGGEEFIIILPDTGEAEAVEIMKRAQRDLTRNFFMHNNERVLI 554 Query: 248 TVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 T +AGV+ +EP + ++ RADRA+Y KQ GRN Sbjct: 555 TFSAGVAEREQDEPPESLVPRADRALYHAKQAGRN 589 >UniRef50_O66623 Putative uncharacterized protein n=1 Tax=Aquifex aeolicus RepID=O66623_AQUAE Length = 338 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/169 (37%), Positives = 93/169 (55%), Gaps = 20/169 (11%) Query: 130 NMDVLTGLPGRRVLDESFDHQLRNAEPLNLY------LMLLDIDRFKLVNDTYGHLIGDV 183 +D LTGL RRVL + LR+ L+LY + ++DID FK +NDTYGHL GD Sbjct: 178 KVDPLTGLLNRRVLP----YILRDVLELSLYTETPFSIAMVDIDNFKKINDTYGHLFGDK 233 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VL+ +A + R + V+RYGGEEF+I++ + ++A R +I + V+N I Sbjct: 234 VLKEVAKIIKKNLRRSDYVFRYGGEEFLILMPSTELKDAVRILEKIRKEVENTPICWQGK 293 Query: 244 HINITVTAGVSR------AFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 I +T++ GV PEE I AD +Y K+TG+NR +F Sbjct: 294 EIRVTISVGVCSDVYNGLKSPEE----YIKCADEKLYLAKRTGKNRVVF 338 >UniRef50_B9L7B2 Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Nautilia profundicola AmH RepID=B9L7B2_NAUPA Length = 558 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 3/164 (1%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGHLIG 181 +L +S D LT L R + E +++ A+ L + ++DID FK +NDTYGHLIG Sbjct: 387 MLYEKSISDPLTKLYNREYMKEFLSQKVQEAKRYKFPLSVAMIDIDFFKKINDTYGHLIG 446 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D VL+ LA L R + V RYGGEE II+ + AC+ + V+ H Sbjct: 447 DCVLKELAELLKDNFRGSDIVSRYGGEEIFIIMPFTDGINACKKLENFRKFVEEHDFCEK 506 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + I IT++AGVS E ++ +I +ADR +Y K+ GRN+ + Sbjct: 507 K-RIKITISAGVSEFDFGEDIEDLILKADRKVYFAKKQGRNKVV 549 >UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C2A6_ACAM1 Length = 420 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 11/170 (6%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDH----QLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 L++ +N D LTGL RR DE R +PL+L ++ DID FK NDTYGHL Sbjct: 247 LSLIANHDALTGLANRRRFDEYLQQIWKQTQREQQPLSL--LICDIDFFKQYNDTYGHLE 304 Query: 181 GDVVLRTLATYL-ASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 GD+ LRT+A + + R + V R+GGEEF I++ + E R+ ++ + Sbjct: 305 GDICLRTVAQKIHQTIVRPLDLVARFGGEEFAIVLPNTDLEGGQVVAERLRMIIQKSQLP 364 Query: 240 HSEGHIN--ITVTAGVS--RAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 H ++ +TV+ G + R+ P + +I RAD+A+Y+ KQ+GR++ + Sbjct: 365 HRGSSVSEFVTVSIGAATVRSHPHTSVSSLISRADQALYQAKQSGRDQVV 414 >UniRef50_C1DVZ5 Ggdef domain protein n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DVZ5_SULAA Length = 826 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 116/201 (57%), Gaps = 11/201 (5%) Query: 90 MLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNM---DVLTGLPGRRVLDES 146 M+++ EN + + F E L++ + + L+ I + D LT L RR + E Sbjct: 625 MISMEENFFTKEKVE-FIESLINAFSPFAS-TLNLIEINKELSLKDSLTNLYNRRYIIEF 682 Query: 147 FDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYR 204 F ++ A+ L N+ ++++D+D FK +NDTYGHL+GD+ L+ ++ + R+ + V R Sbjct: 683 FTKEIGKAKRLDYNIGVLVIDVDNFKKLNDTYGHLVGDLCLKKVSNVFLNSVREMDIVGR 742 Query: 205 YGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI-NITVTAGVSRAFPE--EP 261 +GGEEFI+I+ +++E + RI + V + I + I NITV+ G++ +P+ + Sbjct: 743 WGGEEFIVILPGSDEESTYQIAERIRKKVSSEVIFTPDNKILNITVSIGMA-VYPKDGDN 801 Query: 262 LDVVIGRADRAMYEGKQTGRN 282 LD +I AD +Y+ K++G+N Sbjct: 802 LDDLIKVADEKLYQAKKSGKN 822 >UniRef50_B6BKQ4 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKQ4_9PROT Length = 418 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 89/161 (55%), Gaps = 7/161 (4%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYL--MLLDIDRFKLVNDTYGHLIGDVVLR 186 S D LT L RR + +D +L+ A+ Y+ M+LDID FK NDTYGHL GD L+ Sbjct: 237 SYTDSLTSLHNRRYFNFIYDRELKRAKRTKSYITFMMLDIDFFKQYNDTYGHLEGDFALK 296 Query: 187 TLATYLA-SWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI 245 +++ L S R + V+R GGEEF +++ ++ + R IC V I H Sbjct: 297 SVSKVLRDSLKRPSDYVFRLGGEEFGVVLIDTDESNSARLAREICDAVRAREIKHESSKA 356 Query: 246 N--ITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRN 282 N +T++ GV +E LD ++I RAD +Y+ K++GRN Sbjct: 357 NEFLTISIGVVCCVADEALDEEILISRADEMLYKAKESGRN 397 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 89/159 (55%), Gaps = 5/159 (3%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LT LP R + + H L A N + LMLLDIDRFK+VND+ GH GD++L+ +A Sbjct: 331 DALTSLPNRSLFYDRIYHGLARARRSNSRVALMLLDIDRFKIVNDSLGHDAGDILLKAIA 390 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 L RD +TV R GG+EF+++++ +D + + + S I+ TV Sbjct: 391 MRLTEGVRDMDTVARLGGDEFVVVLEGIHDVDDVIFVANKLLATLSRPLDISGHSISATV 450 Query: 250 TAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNRCMF 286 + GVS FPE+ D ++ AD AMY+ K+ G+N C F Sbjct: 451 SIGVS-IFPEDGADTDELLKNADIAMYKAKEAGKNNCQF 488 >UniRef50_A8IIA3 Putative uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=A8IIA3_AZOC5 Length = 285 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 88/172 (51%), Gaps = 5/172 (2%) Query: 119 DYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNL--YLMLLDIDRFKLVNDTY 176 D + L I S DVLT LP R DE L + + L + L DID FK +ND + Sbjct: 103 DLREARLMIESRRDVLTQLPNRAGFDEQAMRILGDCQRAGLPAAVALFDIDHFKKINDGW 162 Query: 177 GHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNH 236 GH GD VL+ LA TR + R+GGEEF++I+K + E A RI + + Sbjct: 163 GHPAGDAVLKNLADAAQDVTRSTDAFARFGGEEFVMILKGVSAEAAFVHVERIRRAISRD 222 Query: 237 AITHSEGHINITVTAGVS--RAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + H G ITV+AG++ R + + L I RAD A+Y K GR+R M Sbjct: 223 -VPHPSGSGRITVSAGLADVRTYDQAGLTAAISRADEALYAAKAAGRDRTML 273 >UniRef50_D1AZZ8 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZZ8_SULD5 Length = 315 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 132/259 (50%), Gaps = 13/259 (5%) Query: 31 HSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRL-----MDSAHQHMHNC 85 HS + +AS+ E+ +GL + G ++ ND L ++ +D+ + ++ Sbjct: 57 HSYLFSNASQEEMVSETCFGLVKKG--LEEFVKT-NDTLKFISDETAVDIDAIKKGYNSI 113 Query: 86 GRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDE 145 +L +N +Q F Q + T A ++ L SN+D LT RRVL + Sbjct: 114 DTNYVLQAFDN-FQTKIFQELQ--VADETIAKLKLEVERLERESNIDPLTKTHNRRVLVK 170 Query: 146 SFDHQLR--NAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVY 203 + L + L+++L++ D D FK +ND +GH+ GD L L+ + + R +Y Sbjct: 171 DLEEVLSFGKEKDLDMHLVMFDADDFKSINDAFGHIAGDKTLIFLSKLIQNSLRRGTRIY 230 Query: 204 RYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLD 263 RYGGEEF++I+ + +EA + RI + + + + I++T++AG+ +D Sbjct: 231 RYGGEEFVVILNRTSLDEAIKIIDRILKETSDSKLLYKNHDIHLTLSAGICSHRQNMSVD 290 Query: 264 VVIGRADRAMYEGKQTGRN 282 ++ +AD+A+YE K++G+N Sbjct: 291 EILDKADKALYEAKKSGKN 309 >UniRef50_A8UWB7 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWB7_9AQUI Length = 278 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 4/158 (2%) Query: 131 MDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLAT 190 +D LTGL RRVLD + +L + +L+++ +DID FK +NDTYGH+ GD VL+ +A Sbjct: 125 IDPLTGLENRRVLD-YLNQKLSRQKAKDLFVLFIDIDDFKKINDTYGHVFGDKVLKKVAE 183 Query: 191 YLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVT 250 + S R Y+ V RYGGEE ++++ ++ EA RI V +I E H + V+ Sbjct: 184 AILSSVRTYDNVIRYGGEEIVVVLHRVDEREAVEIANRIRDHV--RSIKFKE-HPEVRVS 240 Query: 251 AGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + A L I AD+AMY+ K+ G++R I+ Sbjct: 241 VSIGIAPYRGSLLKTIELADKAMYQAKRKGKDRVEVIE 278 >UniRef50_A1TZT5 Diguanylate cyclase n=3 Tax=Marinobacter RepID=A1TZT5_MARAV Length = 308 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 87/155 (56%), Gaps = 6/155 (3%) Query: 132 DVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LTG+ +R LDE+ R+ P +L +L D+D FKL+ND +GH++GD +L Sbjct: 147 DSLTGIGNKRALDEALQRASAMADRHGAPWSL--ILCDLDHFKLINDNHGHVVGDHILAR 204 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 A L R+ +TVYR+GGEEF I++ N++EA RI +++ + E + + Sbjct: 205 TAEKLEQALRNSDTVYRFGGEEFAILLPHTNEQEARDVADRIRGAIESIRVDGGETPLTV 264 Query: 248 TVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 T + GV+ +E + + RAD A+Y K GRN Sbjct: 265 TASCGVAMHLTDEQPEQWLARADEALYRAKAAGRN 299 >UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SY9_SULDN Length = 611 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/160 (36%), Positives = 90/160 (56%), Gaps = 5/160 (3%) Query: 129 SNMDVLTGLPGRRVLDESFDHQ--LRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 +++D LTG RR++DE + L + NL L++ DID FKLVNDTYGH GD VL Sbjct: 454 ASIDKLTGAYNRRMIDEFMKKEIFLHVRDSKNLSLIMADIDHFKLVNDTYGHQAGDAVLS 513 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 + ++S R + RYGGEEFI+I + ++A +I + ++N GH Sbjct: 514 DVGRIISSTIRKSDIFGRYGGEEFIVICPNTSSQQALILAQKIREEIENFHFAEV-GH-- 570 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 T++ GV+ + ++ +I RAD A+Y K+ GRNR + Sbjct: 571 KTISLGVATLIANDEVENIIKRADDALYIAKKEGRNRVVL 610 >UniRef50_D1RF31 Response regulator diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RF31_LEGLO Length = 481 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 95/165 (57%), Gaps = 2/165 (1%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTGL + + ++ A+ + L +++DID FKL+NDTYGH GDVV++ LA Sbjct: 317 DSLTGLLNHSSVLNRLNIEITRAKQQDSPLSFVMIDIDNFKLINDTYGHPFGDVVIKKLA 376 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + L R+ + + RYGGEEF++I+ AN E + + + NH T ++ +++T+ Sbjct: 377 SMLMMSLRNQDIIGRYGGEEFVLILPGANLENSQKICNNLRLQFSNHTFTVNDHQVHVTI 436 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVIN 294 + G+S + ++ AD+A+Y+ KQ G+N+ + E+ + N Sbjct: 437 SIGISSLTHSYDFNDIVNYADQALYKAKQNGKNQVVVYSERLIWN 481 >UniRef50_A8TQW5 GGDEF domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQW5_9PROT Length = 360 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 13/169 (7%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNA------EPLNLYLMLLDIDRFKLVNDTYGHLIGD 182 ++ D LTGL R F+ +LR+A + L L++ DID FK NDTYGH++GD Sbjct: 178 ASTDGLTGLANRM----QFERELRSAAAKAMEDGTTLCLLMADIDHFKTFNDTYGHMVGD 233 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV-DNHAITHS 241 VLR + L R + R+GGEEF++++ +EA R RI + + + H + S Sbjct: 234 QVLRLVGRVLIEAIRPGDLAARFGGEEFVVVLPECRLDEAARIAERIRERIGEKHVVRRS 293 Query: 242 EGH--INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 G +T++ GV+ P E + +I RAD +Y+ KQ GRNR +D Sbjct: 294 SGDDLGTVTLSLGVTAYQPGEVVGQLIERADTGLYDAKQAGRNRVAVVD 342 >UniRef50_A3UJW0 Stalked-cell differentiation controlling protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UJW0_9RHOB Length = 450 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 8/163 (4%) Query: 129 SNMDVLTGLPGRRV----LDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 S D LTGL RR L ++ D N EPL L +DID FK +NDT+GH GD V Sbjct: 283 SVRDALTGLFNRRYTVSRLRQALDGLRANHEPLTTAL--IDIDHFKRINDTWGHNAGDQV 340 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 L+ + L R + RYGGEEF+++ EAC A R V +T E Sbjct: 341 LKEICARLNEQLRAIDIAGRYGGEEFLVVFSNTTAREACDAMERARLAVCATPVTLRETG 400 Query: 245 --INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 IN+T++ GV+ AF ++ ++ +I RAD A+Y+ K++GRNR + Sbjct: 401 DIINVTMSVGVAEAFMDDSVEALIERADTALYDAKRSGRNRVI 443 >UniRef50_B8KV43 Sensory box histidine kinase n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV43_9GAMM Length = 494 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/188 (35%), Positives = 100/188 (53%), Gaps = 9/188 (4%) Query: 109 GLLSFTAALTDYKIYLLTIRS--NMDVLTGLPGRRVLDESFDHQL----RNAEPLNLYLM 162 G + F ++D K +++ + D LTG RR L+ +L R+ EPL++ Sbjct: 302 GSIMFLKDISDRKAVERRLKAIADKDPLTGAGNRRALESVIKSELSRAHRHDEPLSV--A 359 Query: 163 LLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEA 222 +LDID FK VND YGHL+GD VL +A R Y+T R GGEEF +++ + EA Sbjct: 360 ILDIDWFKSVNDNYGHLMGDRVLIDIAKLCKDLIRPYDTFARIGGEEFALLLPKTSVPEA 419 Query: 223 CRAGVRICQLVDNHAITHSEGHINITVTAGVS-RAFPEEPLDVVIGRADRAMYEGKQTGR 281 R R+ Q V H E + +T++ GV+ A + L+ +I ADRA+Y K GR Sbjct: 420 ERLAERLRQRVAEHTTQAGENRVQVTISIGVALLAKGAKTLEEMIESADRALYCAKLDGR 479 Query: 282 NRCMFIDE 289 NR + ++ Sbjct: 480 NRVVTFEQ 487 >UniRef50_A3JB69 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JB69_9ALTE Length = 806 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 97/172 (56%), Gaps = 9/172 (5%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 +N D LTGLP RR L E F+ +L A+ L + +D+D FK +ND YGH +GD VL+ Sbjct: 371 ANFDSLTGLPNRRRLTELFEQELTFADQRQSALSICFIDLDGFKGINDDYGHSVGDAVLK 430 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 T+A L R+ + + R GG+EF+ I++ D E R+ + + I+H + ++ Sbjct: 431 TVAARLQHVLRECDIIARLGGDEFVAIIR---DVENNAVYERMLEAI-RRPISHQDLTLD 486 Query: 247 ITVTAGVSRAFPEEP--LDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV 296 + + GV+ +P +P D+++ AD+AMY K GRNR D + +NR Sbjct: 487 LAASMGVT-LYPRDPSAPDLLLRHADQAMYAAKDAGRNRYSIFDFETHVNRA 537 >UniRef50_C7LSD5 Response regulator receiver modulated diguanylate cyclase n=5 Tax=Proteobacteria RepID=C7LSD5_DESBD Length = 341 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/181 (39%), Positives = 96/181 (53%), Gaps = 9/181 (4%) Query: 111 LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDE--SFDHQLRNAEPLNLYLMLLDIDR 168 L+ A + K L + S++D LTG+P RR DE S + E L L++LD+D Sbjct: 146 LNLLQAELEEKNRQLQLLSSLDGLTGIPNRRQFDEMLSLEWSRMAREKTPLSLIILDVDH 205 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASW-TRDYETVYRYGGEEFIIIVKAANDEEACRAGV 227 FKL ND YGHL GD LR +A LA+ R + V RYGGEEF I+ + E A Sbjct: 206 FKLFNDRYGHLAGDSCLRRVALALATMLRRPADMVARYGGEEFAAILPGTSLEGAQVVAE 265 Query: 228 RICQLVDNHAITHSEGHIN--ITVTAGVSRAFPEE---PLDVVIGRADRAMYEGKQTGRN 282 + Q V AI H + + +TV+ GVS P P D +I AD+ +Y+ KQ GR+ Sbjct: 266 SMRQTVTELAIEHLDSPVRGVLTVSLGVSSVIPIPGCIPAD-LIQAADQGLYQAKQEGRD 324 Query: 283 R 283 R Sbjct: 325 R 325 >UniRef50_B3EB82 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Desulfuromonadales RepID=B3EB82_GEOLS Length = 473 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 97/161 (60%), Gaps = 7/161 (4%) Query: 131 MDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 +D L+GL R L + + +++ A+ L ++ LD+D FK VNDTYGHL+G +L+ L Sbjct: 298 IDELSGLFNYRYLKVALEREIKRADRYSTQLSVVFLDLDNFKGVNDTYGHLVGSNLLKEL 357 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH-INI 247 L R+ + V RYGG+E+ II+ E A G RI ++++ H+ EG+ I + Sbjct: 358 GALLKKSVREVDVVIRYGGDEYTIILVETGAETAHCVGERIRRMIEKHSFLSLEGYQIQL 417 Query: 248 TVTAGVSRAFPEEP--LDVVIGRADRAMYEGKQTGRNRCMF 286 T + G++ +PE+ L+ ++ AD+AMY GK +G+N C++ Sbjct: 418 TASLGLA-CYPEDTTGLEELLSMADKAMYAGKASGKN-CVY 456 >UniRef50_B2UI26 Diguanylate cyclase with GAF sensor n=2 Tax=Ralstonia pickettii RepID=B2UI26_RALPJ Length = 348 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 120/231 (51%), Gaps = 25/231 (10%) Query: 74 LMDSAHQHMHNCGRELM---LAIVENHWQDAHFDAFQEGLLSFTA-----ALTDYKIYLL 125 ++D + REL+ + VE+ +++ Q +L+ +LTD + + Sbjct: 131 VLDKKPRSFDQAERELLNDLASWVESGFRERELSETQRSILTELQIARHESLTDPMLGIW 190 Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVL 185 R+ M++LT G H +R +PL+L +++D+D FK VNDTYGH +GD VL Sbjct: 191 NRRAAMELLTRECG---------HAMRYGQPLSL--LVVDVDHFKRVNDTYGHPVGDAVL 239 Query: 186 RTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI 245 +A L +R + V RYGGEEF++++ +A R+ V++ I E +I Sbjct: 240 VEIARTLRVNSRPIDAVGRYGGEEFLVVLPDTTTLQASDIAERLRSAVESLEIATPEANI 299 Query: 246 NITVTAGVSRAFPEE----PLDVVIGRADRAMYEGKQTGRNRCMFIDEQNV 292 +++ G++ PE+ P D+++ RAD A+ K+ GRNR +F D Q V Sbjct: 300 RSSISVGLASCEPEKNLCTPTDLIM-RADAALLAAKRLGRNRVIF-DGQPV 348 >UniRef50_A4BAC3 Response regulator receiver domain protein (CheY-like) n=1 Tax=Reinekea blandensis MED297 RepID=A4BAC3_9GAMM Length = 560 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 68/180 (37%), Positives = 93/180 (51%), Gaps = 19/180 (10%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNL--YLMLLDIDRFKLVNDTYGHLIGD 182 L S D LTGL RR + + + + L LMLLD+D FKL+ND GH IGD Sbjct: 389 LKTLSRQDPLTGLYNRRAMLPMIEDAVSEYQRYELPSTLMLLDLDDFKLINDQLGHNIGD 448 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEA------CRAGVRICQLVDNH 236 VL+++A L S +R +T+ R+GGEEF+I+ K + EEA R +R Q +D+ Sbjct: 449 AVLKSVAYVLQSVSRRTDTIARWGGEEFLILAKGIHAEEAFRYLEKVRKQIRESQTIDDR 508 Query: 237 AITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF--IDEQNVIN 294 IT S AGV D +I AD+AMY+ K G++R DE +V N Sbjct: 509 PITFS---------AGVCEVQANHTADTLIAEADQAMYDAKLNGKDRTCIHRPDEPSVAN 559 >UniRef50_A0LD73 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD73_MAGSM Length = 513 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 61/186 (32%), Positives = 106/186 (56%), Gaps = 7/186 (3%) Query: 106 FQEGLLSFTAALTDYKIYLLTIRSNM--DVLTGLPGRRVLDESFDHQLRNAEPLNLYL-- 161 F + L ++++ + K + +R + D LTGL RR L+E + +++ ++L Sbjct: 307 FLQVFLRESSSVIESKRLMEKLRESALKDPLTGLNNRRFLEEYERTIVASSQRKEMFLSV 366 Query: 162 MLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEE 221 +++D+D FK+VNDT+GH +GD VL++LA L TR + V RYGGEEF+++++ Sbjct: 367 LMMDLDHFKMVNDTHGHQVGDAVLKSLAGVLMQQTRASDLVVRYGGEEFMVVLQNERPHM 426 Query: 222 ACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQT 279 + +I + V+ I G + T++ GV+ FP + D V+ +AD A+Y K+ Sbjct: 427 GNQIAEKIRETVERLKINVPGGCLQKTISIGVAE-FPTDGTDFDDVVEKADMALYRAKEQ 485 Query: 280 GRNRCM 285 GRNR + Sbjct: 486 GRNRVI 491 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 90/168 (53%), Gaps = 10/168 (5%) Query: 124 LLTIRSNMDVLTGLPGRR----VLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHL 179 +L S D LT L RR ++D+ F R PL+L ++LDID FK +NDTYGH Sbjct: 137 MLRTLSITDPLTHLHNRRHLMEMVDKEFQRSSRKGAPLSL--VILDIDYFKKINDTYGHQ 194 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 GD VL LA + R Y+ RYGGEEF++++ +EA R+ V H Sbjct: 195 EGDRVLTILADIVRRRLRSYDLAARYGGEEFVLLLPETPVQEALSIAERLRLEVQEHVFE 254 Query: 240 HSEGHINITVTAGVSRAFPE---EPLDVVIGRADRAMYEGKQTGRNRC 284 S G + IT++ GV+ +P E +D + +AD A+Y KQ GRNR Sbjct: 255 GSLGGLVITISLGVA-TYPSSRVESIDSLFRQADEALYRAKQGGRNRV 301 >UniRef50_Q1LM75 Diguanylate cyclase (GGDEF domain) n=2 Tax=Cupriavidus RepID=Q1LM75_RALME Length = 586 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 107/202 (52%), Gaps = 27/202 (13%) Query: 110 LLSFTAAL--TDYKIYL-----LTIRSNMDVLTGLPGRRVLDESFDHQL----RNAEPLN 158 LL FT A+ T + Y+ L + D LTGL RRV F R+A P++ Sbjct: 378 LLCFTLAIVHTLFGHYIARGEALRTLAETDALTGLANRRVFASRFADAYAWCKRDAVPVS 437 Query: 159 LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFII------ 212 L ++LDIDRFK +ND +GH GDVVLRTLA L + R+ + R GGEEF + Sbjct: 438 L--IMLDIDRFKKINDRWGHASGDVVLRTLADALRANVRNVDLPARLGGEEFAVLLPRTG 495 Query: 213 IVKAANDEEACRAGVR--ICQLVDNHAITHSEGHINITVTAGVSRAFPEEP--LDVVIGR 268 I AAN E R ++ +C+ VD + I T + GV++ P+EP LD ++ Sbjct: 496 IADAANLAEKLRLALQALVCEPVD----SDDTASIRFTASFGVAQIAPDEPGNLDSLLMV 551 Query: 269 ADRAMYEGKQTGRNRCMFIDEQ 290 AD+ +Y K GRN+ ++ + Q Sbjct: 552 ADQRLYAAKAGGRNKVVWDEPQ 573 >UniRef50_C6BSU0 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSU0_DESAD Length = 333 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 16/198 (8%) Query: 95 ENHWQDAHFDAFQEGLLSFTAALT--DYKIYLLTIRSNMDVLTGLPGRRVL----DESFD 148 E W + FQ G++S AA++ + +++ TI D LTGL RR L E Sbjct: 139 EQQWDISEL--FQLGIISTVAAISIENSRLFRQTIE---DSLTGLYMRRYLFIRMREEIQ 193 Query: 149 HQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRD-YETVYRYGG 207 R PL++ +++D+D FK VNDTYGH GD VLR++ L +R + RYGG Sbjct: 194 RFKRRGGPLSV--IMIDVDNFKNVNDTYGHATGDAVLRSVGHILHENSRQGVDIPCRYGG 251 Query: 208 EEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA--FPEEPLDVV 265 EEF+I++ + EA RI ++ I+ EG I IT + G++ E D + Sbjct: 252 EEFVILMPGSEKREAEIVAERIRAACEDATISAPEGKIKITASCGIASVEECQEPSADAL 311 Query: 266 IGRADRAMYEGKQTGRNR 283 + AD+ +Y K++GRNR Sbjct: 312 LNIADKRLYCAKESGRNR 329 >UniRef50_B9L5U9 Inner membrane protein YcdT n=1 Tax=Nautilia profundicola AmH RepID=B9L5U9_NAUPA Length = 411 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 86/151 (56%), Gaps = 3/151 (1%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 S +D LT + R+ + + ++N++ YLML+DID FK +NDT+GH +GD VL L Sbjct: 257 SYIDELTQIFNRKKFNTDIKNNIKNSDTQTPYLMLIDIDHFKKINDTHGHPVGDYVLEQL 316 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 + ++ R + YR GGEEF II ++E+ + +I ++++N+ E +IT Sbjct: 317 SKLISDNIRSNDKFYRIGGEEFAIISNQKSNEDEMKFAEKIKKIIENYNF---EKAGDIT 373 Query: 249 VTAGVSRAFPEEPLDVVIGRADRAMYEGKQT 279 ++ G ++ P E RAD A+YE K+T Sbjct: 374 ISIGFTKYQPNESYHKWYKRADEALYEAKKT 404 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 6/162 (3%) Query: 132 DVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTGL RR LDE+ + ++ A E + L L++LDID FK VNDTYGH +GD VLR LA Sbjct: 478 DSLTGLYNRRYLDETLEREVSRARREGIPLSLVMLDIDHFKQVNDTYGHQVGDEVLRILA 537 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + L++ R + RYGGEEF+I++ E V+ ++ H I T+ Sbjct: 538 STLSADIRAEDVACRYGGEEFLILLPNMPLETTMLRAQGWRSAVEALSVKHGNFQITFTI 597 Query: 250 TAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNR-CMFID 288 + GV+ A+PE + D + AD+A+Y K GRN+ +F D Sbjct: 598 SLGVA-AYPEHGKTPDDLTRCADQALYRAKNEGRNQVSVFFD 638 >UniRef50_Q47WC7 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47WC7_COLP3 Length = 477 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/182 (35%), Positives = 97/182 (53%), Gaps = 4/182 (2%) Query: 110 LLSFTAALTDYKIYL-LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDI 166 L+SF L KI+L L ++ D LT LP RR + QL E N L L+ +DI Sbjct: 297 LISFIIVLYVRKIHLKLDKLASNDDLTNLPNRRSFHDELAKQLLLKERYNSELSLLFIDI 356 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAG 226 D FK VNDT GH +GD VL++LA L R + V R+GGEEFII++ ++ +A Sbjct: 357 DNFKKVNDTKGHDVGDKVLKSLANVLNGNVRKSDFVARWGGEEFIILLIGSDINQAQVIA 416 Query: 227 VRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 ++ + N +T++ G + E+ +D ++ RAD A+Y+ K G+N C+ Sbjct: 417 EQLRSQIANSKHLSQYAQQQVTISLGATSVTNEDNIDTILKRADLALYKAKSKGKN-CVV 475 Query: 287 ID 288 D Sbjct: 476 SD 477 >UniRef50_C4KZ82 Diguanylate cyclase n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KZ82_EXISA Length = 358 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 16/189 (8%) Query: 110 LLSFTAALTDYKIYLLTIR------------SNMDVLTGLPGRRVLDESFDHQLRNAEPL 157 L+S+ A Y++ LL +R + D LTG+ RR+L+E+ + AE Sbjct: 172 LMSYGGACAAYRL-LLELRRHFENVQHQQQLARTDALTGIANRRLLNEAMANLTVEAE-- 228 Query: 158 NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAA 217 L+L+DID FK VNDTYGH +GD VLR L L + + + V R+GGEEF+I++ A Sbjct: 229 EYALILVDIDHFKRVNDTYGHDVGDDVLRELGMLLVNESDERHLVGRFGGEEFLIVMPHA 288 Query: 218 NDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGK 277 E R I + V S G ++ITV+ G + E +D V+ AD A+Y K Sbjct: 289 TRNEVSRLAESIREKVSTFPFETSAGTLHITVSLGACHSNDIE-IDSVLKHADEALYHAK 347 Query: 278 QTGRNRCMF 286 ++GRNR + Sbjct: 348 ESGRNRFIL 356 >UniRef50_C1TNZ5 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNZ5_9BACT Length = 481 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 1/156 (0%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 +++D LTG+ RR D +F H L E + ++DID FK VNDTYGHL+GD VL + Sbjct: 324 ASVDELTGMWNRRAFDLAFAHLLEKFEG-QCSVTMMDIDHFKHVNDTYGHLMGDRVLGHV 382 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 + + R+GGEEFI+++K +A + +I + V+ + + IT Sbjct: 383 CDVVTKAIGPDDVCGRWGGEEFIVLLKGRKKGDAVKTAEKIRRAVEASPYEDGDVVLPIT 442 Query: 249 VTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 V+ GV+ P E + I RAD+A+Y K++GRNR Sbjct: 443 VSLGVAEHHPGESRETTIARADQALYRAKESGRNRT 478 >UniRef50_A6LZP4 Diguanylate cyclase n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LZP4_CLOB8 Length = 365 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 10/166 (6%) Query: 132 DVLTGLPGRRVLDESFDH----QLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LTGL R D SF++ +R E L++ + +DID FK +NDTYGH GD +L++ Sbjct: 199 DYLTGLNNVREFDNSFNNISQRAVRKEEELSM--LFIDIDFFKKINDTYGHNAGDTILKS 256 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV-DNHAITHSEGHIN 246 LA L R Y+ V R GGEEF II+ +D +A + R+ + V DN I Sbjct: 257 LALILLDTCRAYDVVSRMGGEEFSIILLDCSDSKAVKIAERLREKVEDNDFYISDNKFIK 316 Query: 247 ITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 IT++ G++ ++P +D ++ AD A+Y+ K TGRN+ + + + Sbjct: 317 ITISIGIA-SYPNMTTQVDNLLEMADTALYQAKNTGRNKVVLFNNE 361 >UniRef50_Q7NQA3 Probable GGDEF family protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQA3_CHRVO Length = 490 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 88/161 (54%), Gaps = 10/161 (6%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLR-----NAEPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 + D LTG R + LR AEP L+++DID FK VND +GH IGD Sbjct: 321 ATTDPLTGCLNRLAFLDLLPGWLRACERTGAEP---QLLMIDIDHFKQVNDKHGHQIGDQ 377 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VLR +A L S R + + R+GGEEF+++V + +++A +R V H ++ S Sbjct: 378 VLREIADLLRSQLRGSDLLIRWGGEEFVVLVGSHGEDDALAERLRTA--VARHVMSASGK 435 Query: 244 HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + +TV+ G+ + P E L+ + RAD A+Y KQ GRNR Sbjct: 436 RLTVTVSLGLCQWLPPETLEAAVARADLALYAAKQGGRNRV 476 >UniRef50_Q2BQN9 Diguanylate cyclase, putative n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQN9_9GAMM Length = 529 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 88/158 (55%), Gaps = 2/158 (1%) Query: 127 IRSNMDVLTGLPGRRVLDESFDHQLR--NAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 +R+ D LTGLP R DE + + + +++ D+D FK +NDTYGHL GD V Sbjct: 367 LRARTDPLTGLPNRAAYDEQIAQEYERWSRYRTSFSVVVADLDFFKKINDTYGHLAGDKV 426 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 LR +A + R + V RYGGEEF+I++ + EEA +A ++ + + + Sbjct: 427 LRLVAKVITKNIRVTDFVARYGGEEFVILLPSTVAEEAAQAMDKLRESLASSPFNFHGKP 486 Query: 245 INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 + IT++ GV+ + LD V RAD A+Y+ K+ GRN Sbjct: 487 VGITMSFGVTEIKEGDSLDDVFTRADEALYQAKEDGRN 524 >UniRef50_C0QPX4 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QPX4_PERMH Length = 331 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 91/161 (56%), Gaps = 5/161 (3%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 ++MD LTGL RR + + + +++ E N L+ +D+D FK +ND YGH +GD+VL+ Sbjct: 167 ASMDFLTGLVNRRRFERALEDAIKDFEKRNYPFSLIYVDVDNFKDINDNYGHSVGDIVLK 226 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI---THSEG 243 +AT + R + R GGEEF I++ E+A + R+ ++ N I + Sbjct: 227 EIATIFKFYLRANTIIGRIGGEEFAILLPGVEIEDAVKIAERLRNIIQNREIRIGPDRDE 286 Query: 244 HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + +T + GV++ + ++ ++ RAD AMY K+TG+N+ Sbjct: 287 ILRVTASFGVTQVKKGDTVNSILHRADTAMYRAKKTGKNKV 327 >UniRef50_D2C2R9 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech586 RepID=D2C2R9_DICD5 Length = 501 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 95/166 (57%), Gaps = 2/166 (1%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFD--HQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGD 182 L + + D LTGL R+ + F ++A+ ++L+D+D FK +ND YGH IGD Sbjct: 336 LELMATTDKLTGLMNRQAFEYIFRTLRMKQSAQQRTFSIILIDLDFFKKINDQYGHHIGD 395 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 VL A + R ++ R+GGEEF++++ + +A R +I Q V ++H Sbjct: 396 RVLVKTARLIQRAIRKTDSACRWGGEEFVLLLGDCSLHQAHRVAEKIRQAVHFALVSHRH 455 Query: 243 GHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 IN+T++ GV+ + P E +D ++ RAD+A+Y+ K+ GR++ + + Sbjct: 456 QVINLTISCGVAESNPGESIDHLVQRADKALYQAKRQGRDQAVMAE 501 >UniRef50_B3QHH6 Diguanylate cyclase n=3 Tax=Rhodopseudomonas palustris RepID=B3QHH6_RHOPT Length = 379 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 87/159 (54%), Gaps = 5/159 (3%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEP-LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 S D LTG+ RR LDE + + + P L ++++D+D FKL ND GH GD L+ Sbjct: 219 STTDPLTGVFNRRYLDELIEQETASLVPSLGQSVLMIDVDHFKLFNDHGGHAAGDSCLQQ 278 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS---EGH 244 + T + R + V RYGGEEF +++ ++ E R+C V + I H +G Sbjct: 279 IVTAVRRNLRSCDVVVRYGGEEFAVVLPGLDEAELRETAERLCHAVSDLQIPHPGLGQGR 338 Query: 245 INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 + +T++ G++ P E L I RAD+++Y K+ GRNR Sbjct: 339 V-VTISVGIAPPVPAETLADAIQRADQSLYRAKRAGRNR 376 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 115/204 (56%), Gaps = 13/204 (6%) Query: 88 ELMLAIVENHWQD-AHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDES 146 EL LA VEN D HF G+L+ A T + L+ +++ D LTGLP R +L++ Sbjct: 234 ELFLAPVENESGDVTHFI----GVLNDVTARTHAEKRLIH-QASHDALTGLPNRNLLNDR 288 Query: 147 FDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 H + + +M LD+DRFKLVND+YGH +GD ++R +A +++ R +TV R G Sbjct: 289 ITHAIARSRGRLTAVMFLDLDRFKLVNDSYGHAVGDALIREVANRVSACLRAGDTVARLG 348 Query: 207 GEEFIIIVK-AANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAF-PEEPLD- 263 G+EF+++++ A+ E+A R + L D + + G + + ++A + A P + D Sbjct: 349 GDEFVVLLEDLASIEDAARLAAK---LRDRLSESVRIGSLELPLSASIGVALAPRDGRDP 405 Query: 264 -VVIGRADRAMYEGKQTGRNRCMF 286 +++ AD AMY K+ GRN F Sbjct: 406 EMLLKNADIAMYRAKERGRNNYCF 429 >UniRef50_B0KCF6 Diguanylate cyclase with GAF sensor n=12 Tax=Thermoanaerobacterales RepID=B0KCF6_THEP3 Length = 554 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 66/179 (36%), Positives = 102/179 (56%), Gaps = 11/179 (6%) Query: 114 TAALTDYKIYL-LTIRSNMDVLTGLPGRRVLDESFDHQLRNA----EPLNLYLMLLDIDR 168 + A+T+ K Y +T +S D LT RR +++ + A EP++L ++ D+D Sbjct: 374 SVAITNAKRYYEVTKKSITDPLTKTYNRRYFNDALMENIMRADETSEPVSL--IMFDLDN 431 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FKL+NDTYGHL+GD VL+ +A + + R + V R+GGEEF +I+ E+A R Sbjct: 432 FKLINDTYGHLVGDEVLKEVAKRIKNNVRSDDIVARFGGEEFAVILPKLTAEQAYMIAER 491 Query: 229 ICQLVDNHAITHSEGHINITVTAGVSRAFPEE--PLDVVIGRADRAMYE-GKQTGRNRC 284 I V + I +G I +T+T GV+ +PE+ + +I ADRA+Y GK GRN+ Sbjct: 492 IRNEVSSRPIRTDKGDIYVTITGGVAD-YPEKADSAEKLISHADRALYAGGKSKGRNKI 549 >UniRef50_C0N947 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N947_9GAMM Length = 713 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 96/164 (58%), Gaps = 5/164 (3%) Query: 132 DVLTGLPGRRVLDESF--DHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTGL RR D++ D QL E L L++ DID FK ND YGH GDV L+++A Sbjct: 544 DSLTGLRNRRFFDDALSRDIQLAEREQTALSLLICDIDHFKRFNDEYGHEAGDVALQSVA 603 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAAN-DEEACRAGVRICQLVDNHAITHSEGHINIT 248 L R + R GGEEF+++++ A+ D+ +A + + +NH +E +T Sbjct: 604 AKLKQQFRQSDIPCRLGGEEFVVLMREASLDDARVKAEKLLEAIAENHIDYDNEKLGPLT 663 Query: 249 VTAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 V+AGV+ +EP + ++ +AD+A+Y+ KQTGRN C+ + E + Sbjct: 664 VSAGVASWRGDEPDAEALLRKADKALYKAKQTGRN-CVVVFEAD 706 >UniRef50_Q2SD41 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SD41_HAHCH Length = 313 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 61/160 (38%), Positives = 87/160 (54%), Gaps = 12/160 (7%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPL------NLYLMLLDIDRFKLVNDTYGHLIGDVVL 185 D LTG+ +R +FD+QL L L ++ DID FK VNDTYGH GD +L Sbjct: 143 DSLTGVANKR----AFDYQLHREVSLATRYKYKLSMLFFDIDHFKKVNDTYGHAAGDALL 198 Query: 186 RTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH- 244 + LA + RD + +R+GGEEF +++ E A R+ + V N A H EGH Sbjct: 199 QQLAKVVQDNCRDSDLCFRFGGEEFAMLLAKTETEGAYAIAERLREAVANTAFQH-EGHT 257 Query: 245 INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 I+ T++ GV+ EE + RAD+A+Y+ K GRN+ Sbjct: 258 ISFTISIGVATYDGEENRSDFLERADQALYDAKHAGRNKT 297 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 7/164 (4%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFD--HQL--RNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 L S +D LTGL RR E FD H+L R +P ++LDID FK +NDTYGH Sbjct: 158 LKTASRVDGLTGLYNRRYWQERFDEMHKLCVRREKPSTA--LMLDIDHFKRINDTYGHQA 215 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD V++ LA + R+ + RYGGEEF II+ ++ E+A RI QL + H Sbjct: 216 GDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDSSVEDAKIVAERIRQLAQRLVVEH 275 Query: 241 SEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNR 283 I+ TV+ G+++ P+ + + AD+A+YE K+ GRN+ Sbjct: 276 EGESISFTVSLGLAQFSPDFKGAMAWLECADQALYEAKENGRNQ 319 >UniRef50_Q085X7 Diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q085X7_SHEFN Length = 357 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 99/178 (55%), Gaps = 8/178 (4%) Query: 110 LLSFTAALTDYKIYLLTIRSNMDVLTGLPGRR----VLDESFDHQLRNAEPLNLYLMLLD 165 +LS+ +AL K Y S D LT L RR +L + RN EPL++ +L D Sbjct: 173 MLSYNSALKLGKKYQQLALS--DPLTTLANRRNALTILQQEKSRISRNNEPLSV--LLCD 228 Query: 166 IDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRA 225 +D FK+VND YGH GD+VL L+ R + V R+GGEEF+ I+ + E+A Sbjct: 229 LDHFKMVNDKYGHNCGDMVLTELSQVFKQSVRQQDCVARWGGEEFLFILPQTSAEQASVI 288 Query: 226 GVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 +I V +H + + I++T++ G+S+ ++ +D +I ADR +Y+ K+ GRN+ Sbjct: 289 AEKIRTNVHHHKVHFLKHEISLTISIGISQLTDDQNIDELINNADRNLYQAKKNGRNQ 346 >UniRef50_B4WXS7 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WXS7_9GAMM Length = 412 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 93/163 (57%), Gaps = 11/163 (6%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNA----EPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 S D LTGL RR DE+FD + R +PL + ML+D+DRFK ND YGHL GD+ Sbjct: 228 SREDSLTGLANRRFFDEAFDREWRRCKRSRQPLTV--MLVDVDRFKAYNDHYGHLQGDLC 285 Query: 185 LRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 L+ LA ++ R + V R+GGEEF+++ ++ EA + R+C+ V + AI H++ Sbjct: 286 LQKLAAEFRRYSRRGGDLVARFGGEEFVLLYPETDEVEAQQLASRLCRSVRSLAIPHADN 345 Query: 244 H--INITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRN 282 +TV+ G + P + ++ ADRA+Y KQ GR+ Sbjct: 346 PEMQEVTVSVGAAMMIPGDRHSAGDLLEAADRALYLAKQGGRD 388 >UniRef50_A8I9A7 Putative uncharacterized protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I9A7_AZOC5 Length = 309 Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 91/163 (55%), Gaps = 7/163 (4%) Query: 129 SNMDVLTGLPGRR----VLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 + +D LT + RR V ++F R+ PL+L + LDID FK+VNDT+GH IGD V Sbjct: 139 ATIDPLTEIFNRRHFMEVARQAFAEAERSHAPLSL--LTLDIDHFKIVNDTHGHGIGDEV 196 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 +R +A R + + R GGEEF I++ +EAC + V + + E Sbjct: 197 IRAVARRCGQTLRPKDVLARMGGEEFAILMPGTTAQEACAQAWALFDGVTSEPLVLPELQ 256 Query: 245 INITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCMF 286 + ++++ G ++ P++ LD + RADRA+Y K++GR R +F Sbjct: 257 LRVSISVGGAQCLPDDSSLDATLTRADRALYAAKRSGRGRVVF 299 >UniRef50_Q0F2V6 GGDEF domain protein n=2 Tax=Proteobacteria RepID=Q0F2V6_9PROT Length = 450 Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 113/195 (57%), Gaps = 18/195 (9%) Query: 101 AHFDAFQEGL-LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRV----LDESFDHQLRNAE 155 + D F +G+ L+ ALT ++ L + +D LT + RR L+E F +R Sbjct: 262 SSLDLFGQGMALAMNNALTHDRLQKL---AALDPLTAIYNRRFGLARLNEEFSRAVRTTG 318 Query: 156 PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVK 215 +L +M+ DID FK VNDTYGHL+GD VL + + R+ + + RYGGEEF++I+ Sbjct: 319 --HLGVMMFDIDHFKKVNDTYGHLVGDRVLIQVTKTARAALREGDILMRYGGEEFLVILP 376 Query: 216 AANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDV-----VIGRAD 270 A+ E + G R+ +V+ ++T + I++T++ GV+ ++PE L+V ++ AD Sbjct: 377 VASKENSRDIGERMRHMVEETSVTDGDQVIHVTISIGVT-SYPE--LEVAGEQDLVKCAD 433 Query: 271 RAMYEGKQTGRNRCM 285 A+Y K++GRN+ + Sbjct: 434 EALYLAKESGRNKVI 448 >UniRef50_A8ETV0 GGDEF domain protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ETV0_ARCB4 Length = 291 Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 8/282 (2%) Query: 7 EIDAILLNLNKAIDAHYQWLVSMFHSVVAR-DASKPEITDNHSYGLCQFGRWIDHLGPLD 65 EI+ I+L +D H + ++ ++ + D + EI + C F +I + Sbjct: 10 EIENIILITKNLVDKHSFFYNNLLKKIICKLDIEEIEIEKYLNQKNCPFNDFIKSFPNIT 69 Query: 66 NDELPYVRLMDSAHQHMHNCGRELMLAIVENHW-QDAHFDAFQEGLLSFTAALTDYKIYL 124 +E + +L+++ H++ H + ++ + N ++ FD F L D I+ Sbjct: 70 LEE-NFEKLINT-HEYFHKLLNKTLMNYINNKTIKEKLFDDLYIRHKDFINEL-DNIIFK 126 Query: 125 LTIRSN-MDVLTGLPGRRVLDESFDHQ--LRNAEPLNLYLMLLDIDRFKLVNDTYGHLIG 181 R N +D LT R + E + + L E + L+ DID FK +NDTY H G Sbjct: 127 YNFRKNQLDKLTLAWNREIFLELLEKEYFLMKREEASFSLVYFDIDFFKNINDTYFHDFG 186 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D +LR L Y+ + R Y+++ R+GG+EF++++ N +EA RI ++ Sbjct: 187 DFILRELIKYIKTKLRRYDSICRWGGDEFLVLLPKTNLKEATDIINRIRIKINKKRFILD 246 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 + +INIT + G+ + E + +I RAD +Y+ K+ G+NR Sbjct: 247 KNNINITCSFGIVESTLNETIQEIITRADELLYKAKKLGKNR 288 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 94/159 (59%), Gaps = 10/159 (6%) Query: 132 DVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LT L RR DE ++ R+ +PL+L ++D+D FK +ND + H+IGD VL Sbjct: 842 DSLTQLGNRRAFDEQLQYEFKRCERSEQPLSL--AIIDVDHFKSINDRFLHVIGDQVLIE 899 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 L+ L++ RD + + R+GGEEF +++ +EA +A RI Q +++ + H + + Sbjct: 900 LSALLSNMLRDIDYIARWGGEEFALLMPETTAKEALQAAERIRQRIEDTSYQHLADELAV 959 Query: 248 TVTAGVSRA--FPEEPLDVVIGRADRAMYEGKQTGRNRC 284 TV+ GV+ + +P +V AD+A+Y+ KQ+GRNR Sbjct: 960 TVSIGVASSEHYPNHSALLVA--ADKALYKAKQSGRNRT 996 >UniRef50_Q2BI67 GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BI67_9GAMM Length = 323 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 10/171 (5%) Query: 132 DVLTGLPGRRVLDESFD-----HQLRNAEPLNL-YLMLLDIDRFKLVNDTYGHLIGDVVL 185 D LTGLP R+ ++ + + H+ P+ ++++LDID FK +NDT+GHL GD VL Sbjct: 149 DNLTGLPNRQTMEFTLNDVVTFHRNNKLNPIKPSWMVVLDIDHFKKINDTFGHLYGDEVL 208 Query: 186 RTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI 245 A L R + ++RYGGEEF+ IV AN EEA + R Q V ++ + Sbjct: 209 LHFADLLKKSFRHTDFLFRYGGEEFVAIVNNANPEEAQQILERFHQAVQDYDFPSGK--- 265 Query: 246 NITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV 296 +TV+ G ++ P P ++ ADRA+Y K GRN + ++ + RV Sbjct: 266 -VTVSIGYTQVDPVTPPLLLFEHADRALYHAKHNGRNMIVNFEDMDSQVRV 315 >UniRef50_C9YCE2 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCE2_9BURK Length = 382 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 66/162 (40%), Positives = 94/162 (58%), Gaps = 14/162 (8%) Query: 132 DVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LTGL RR + E+ QL RN +P+++ +++D+D FK +NDTYGHL GD VLR Sbjct: 223 DELTGLSNRRFIMEALALQLAQARRNGKPVSV--LMIDVDYFKSINDTYGHLSGDRVLRN 280 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQL---VDNHAITHSEGH 244 LAT L S R + R+GGEEF++++ D +A A + L V++ + +G Sbjct: 281 LATSLRSRLRAQDMAGRWGGEEFLVVLP---DTDAAGATILAGNLRAEVEDARWSAQDGR 337 Query: 245 -INITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTGRNRC 284 I +T++ GV E LD VI AD+A+Y KQ GRNR Sbjct: 338 SIPLTLSIGVHTCDSATEELDTVISAADQALYRAKQAGRNRV 379 >UniRef50_Q0TPG8 GGDEF domain protein n=10 Tax=Clostridium perfringens RepID=Q0TPG8_CLOP1 Length = 289 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 5/159 (3%) Query: 132 DVLTGLPGRRVLDESFDHQL-RN-AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTG+ +R +D+ F + RN E + +++ DID FK VNDTYGHL+GD +LR A Sbjct: 132 DYLTGVYNKRYIDQRFSKEAHRNLKESIPTTVIMTDIDSFKKVNDTYGHLVGDKILRGFA 191 Query: 190 TYLASWTRD-YETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 L + R+ + + RYGGEEFII++ N + + ++ ++++ + + + + IT Sbjct: 192 KVLNNNIRENSDWIGRYGGEEFIIVLNNTNLKNGVKVAEKLRKIIEKMSFDYGDLSLKIT 251 Query: 249 VTAGVSR-AFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + GV + E+P D I AD +Y K TGRN+ +F Sbjct: 252 SSFGVCEVSEKEDPFD-TIKNADEKLYMAKMTGRNKTVF 289 >UniRef50_Q6WLF6 Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q6WLF6_9BACT Length = 584 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 15/269 (5%) Query: 20 DAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDE--LPYVRLMDS 77 D+ Q L H ++ ++ TD L GR+ D +G D+ E VR M Sbjct: 324 DSARQSLKDFIHQMLQEISALGSTTDRFQQSL---GRYADTIGQADSLESLAGVVRDMVE 380 Query: 78 AHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGL 137 + +H ++ + Q H A + L +L D +I L+ + D LT + Sbjct: 381 ESRAVHG-----LVNQAQTRMQAEHERATE--LTDRVRSLED-EIRKLSDEVSTDPLTQI 432 Query: 138 PGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASW 195 RR + ++F+ + + L + LLD+D FK +NDT GH GD+ L+ L+ + Sbjct: 433 ANRRGMAKAFEVERARLQRSGGVLAIGLLDVDNFKKLNDTLGHHTGDLALQFLSRRVGEC 492 Query: 196 TRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSR 255 R +++ RYGGEEF++++ +EA + R+ + + T E + IT +AGV++ Sbjct: 493 LRPSDSLARYGGEEFVVLLPDTPVDEAQQVLTRLQRTLSAEFFTQDENKVFITFSAGVTQ 552 Query: 256 AFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 +E ++ + RAD A+YE KQTG+NR Sbjct: 553 YRADEAIEAALDRADVALYEAKQTGKNRT 581 >UniRef50_C9NRL0 Putative virulence-mediating protein VirC n=2 Tax=Vibrio RepID=C9NRL0_9VIBR Length = 634 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 93/165 (56%), Gaps = 5/165 (3%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLY-LMLLDIDRFKLVNDTYGHLIGDV 183 L ++ D LTGL RR + E++ Q N + Y L ++DID FK NDT+GH +GD Sbjct: 465 LESQNTTDPLTGLANRRYI-ENWLSQSDNVQQHKSYALSVIDIDHFKQFNDTHGHDVGDT 523 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VL+ A L + TR ++ + R+GGEEF++I+ N R+ + V++H I E Sbjct: 524 VLKATANQLKNNTRSHDIIARWGGEEFVMIIPIDNVHTVEETLERLRKSVESHKIHIDED 583 Query: 244 HINITVTAGVSRAF---PEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + +T++ G E D V +AD+A+Y+ KQ+GRN+C+ Sbjct: 584 SLAVTISVGTQLCHYQDIETDWDRVFRKADKALYQAKQSGRNKCI 628 >UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEB9_9SPHN Length = 600 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 88/159 (55%), Gaps = 7/159 (4%) Query: 127 IRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 I + D LTG+ RR + D + AE ++ + + DID FK +ND+YGH GD V Sbjct: 442 IMAQTDQLTGIANRRRTEFVLDQAIGAAEQSGKSVSIAIFDIDHFKRINDSYGHHTGDEV 501 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 ++ +A A+ R + V RYGGEEF+I++ A E A R G RI + ++ + Sbjct: 502 IKRVAQDAAAQLRSGDLVGRYGGEEFVIVLPDATQETALRVGERIRETIEA-----ANSG 556 Query: 245 INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 +T++ GV+ E D ++ RADRA+Y K+ GRNR Sbjct: 557 PPVTISIGVAELAQGETADALLRRADRALYSAKRAGRNR 595 >UniRef50_C8QWN5 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QWN5_9DELT Length = 612 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 97/180 (53%), Gaps = 17/180 (9%) Query: 116 ALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFD-----HQLRNAEPLNLYLMLLDIDRFK 170 AL + ++Y L + D LTGL +R + + H+ P ++ ++LD+D FK Sbjct: 422 ALANARLYRLAV---TDSLTGLRNKRYCETALRKLVEAHRQDRHRPFSV--LMLDLDHFK 476 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 VNDT+GH +GD VL LA + R + RYGGEEFI++V + + R+C Sbjct: 477 RVNDTHGHPVGDEVLSQLAELIRRQLRQDDVACRYGGEEFIVLV-TDGPQTGHKIAARLC 535 Query: 231 QLVDNHAITHSEGHINI--TVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNRCMF 286 + VD H H G + + T++ GV+ FP V VIG AD+A+YE K+ GRNRC Sbjct: 536 RAVDEHTF-HCAGGLALHNTISIGVA-GFPAHGKTVAEVIGAADQALYEAKRAGRNRCQL 593 >UniRef50_Q31M78 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=3 Tax=Synechococcus elongatus RepID=Q31M78_SYNE7 Length = 1037 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 7/187 (3%) Query: 109 GLLSFTAALTDYKIY--LLTIRSNMDVLTGLPGRR----VLDESFDHQLRNAEPLNLYLM 162 GLL + +T+ K L ++ D LTG+ RR + + R +L L+ Sbjct: 843 GLLGISTDITEQKKLEQKLQQQATTDALTGILNRRQFITLAQAELNRIYRIQRDTSLSLV 902 Query: 163 LLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEA 222 ++DID FK +ND+YGH +GD VL R+ + R GG+EF++++ N ++A Sbjct: 903 IIDIDHFKTINDSYGHTVGDQVLILWTNICQQNIREVDIFARLGGDEFVLMLPETNGKQA 962 Query: 223 CRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGR 281 + RI QLV ++ + I IT++ G++ PE LD + RADRA+Y+ KQ GR Sbjct: 963 YQVMDRIRQLVIQQSLHLPQQAIAITISVGIAVWTPEILTLDQFLERADRALYQAKQQGR 1022 Query: 282 NRCMFID 288 +R + +D Sbjct: 1023 DRIILLD 1029 >UniRef50_Q07ZF0 Diguanylate cyclase n=21 Tax=Shewanella RepID=Q07ZF0_SHEFN Length = 530 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 2/158 (1%) Query: 131 MDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 +D LT L R L++ + + RN L++ + DID FK +ND +GH GD L+ + Sbjct: 371 LDPLTQLANRTALEDRMEQEYRNHVRFKTPLWIAITDIDHFKNINDNFGHSTGDKTLQVI 430 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 A L + RD E V RYGGEEF++++ DE + R+ + + N I +T Sbjct: 431 AMALKNSLRDSEFVARYGGEEFVLLLPDVTDEHISQLLNRVREKIKNIPFKFKNQRITVT 490 Query: 249 VTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 ++ G ++ E L+ RAD A+Y+ K GR+R + Sbjct: 491 LSIGAAQVMENETLEEAFERADAALYQAKNNGRDRVVI 528 >UniRef50_C8VW84 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VW84_DESAS Length = 314 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 88/153 (57%), Gaps = 2/153 (1%) Query: 132 DVLTGLPGRRVLDESFDHQLR--NAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTG+ RR + + +L N L+++DID FK +ND++GH GD +L+ + Sbjct: 155 DFLTGITNRRFAIDRMNEELSRINRGEDGFSLLMIDIDNFKDINDSHGHECGDYILKDVV 214 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + S R+Y+ + R+GGEEF++++ + +A +I V T+ ++T+ Sbjct: 215 NLIKSVLRNYDMMARWGGEEFLVMLPSTEINDAKIVAEKIISNVRTQIFTYKGNSFHVTI 274 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 TAGV++ + LD +I RAD AMY GK++G+N Sbjct: 275 TAGVAQHQAGDDLDSIIKRADEAMYHGKKSGKN 307 >UniRef50_C1F117 Sensory box-containing diguanylate cyclase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F117_ACIC5 Length = 627 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 15/174 (8%) Query: 129 SNMDVLTGLPGRR----VLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 + +D LTG+ RR VLD + +R P L +L+D+D FK ND YGHL GDV Sbjct: 445 AEIDALTGVANRRHFDKVLDAEWKRAIRTGAPTAL--LLIDVDWFKNYNDIYGHLEGDVC 502 Query: 185 LRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE- 242 LR++AT+++ R + V R+GGEEF +I+ ++ A G RI + ++ + H Sbjct: 503 LRSIATWISVCIHRSTDLVARFGGEEFALILPDTDEAGAAALGERIREEIEARKVVHRGN 562 Query: 243 --GHINITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNRCMFI-DEQN 291 GH IT++AG + P ++I AD+A+Y K +GRNR M DEQ Sbjct: 563 EYGH--ITISAGCASLMPMRGTSGTLLIDAADKALYRAKSSGRNRVMRASDEQE 614 >UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLJ7_DESAH Length = 576 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 103/200 (51%), Gaps = 17/200 (8%) Query: 101 AHFDAFQEGLLSFTAA---LTDYKIYLLTIRSNM------DVLTGLPGRRVLDESFDHQL 151 H+ A +E + S A L + + L T + D LT + RR DE D + Sbjct: 367 THYSAVKEDITSRKKAEKLLKETQKRLETANQKLQTLVTSDGLTMIANRRKFDEYLDQEW 426 Query: 152 RNAEPLNLYLMLL--DIDRFKLVNDTYGHLIGDVVLRTLATYL-ASWTRDYETVYRYGGE 208 + + ++L LL DID FK NDTYGH GD LR +A + + R + V RYGGE Sbjct: 427 QRCKRAKVWLSLLMCDIDYFKHYNDTYGHQAGDDCLRKIAQAMEKTVVRPMDLVARYGGE 486 Query: 209 EFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN--ITVTAGVSRAFPEE---PLD 263 EF +I+ AC RI + V N I HSE ++ +T++ G++ P++ +D Sbjct: 487 EFAVILSDTGLNGACHVARRIQEDVKNLNIAHSESSVSTHVTLSIGITCLIPDDEDLSMD 546 Query: 264 VVIGRADRAMYEGKQTGRNR 283 ++I AD A+Y+ K+ GRNR Sbjct: 547 LLIKTADEALYKAKRKGRNR 566 >UniRef50_A8EV18 GGDEF/PAS domain protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EV18_ARCB4 Length = 705 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 10/172 (5%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLY--LMLLDIDRFKLVNDTYGHLIG 181 +L ++ D LTGLP R +L + +H + ++ L+ +D+D FK VNDT GH IG Sbjct: 534 ILEYQATHDNLTGLPNRLLLTDRIEHAITKTVRHKIFGGLIFIDLDNFKAVNDTLGHDIG 593 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN-----H 236 DV+L T+A + RD +TV R GG+EFI+++ + + A I L + + Sbjct: 594 DVLLITVAKKIKQVIRDEDTVSRIGGDEFIVLIDNIGN-NSIDAKKNITSLAEKIKETLN 652 Query: 237 AITHSEGHINITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNRCMF 286 ITH EGH+NI+ + F + + V +I +AD AMY K+ G+N F Sbjct: 653 DITHIEGHVNISTPSIGITLFSDASVSVKDIIKQADTAMYSAKKQGKNAIEF 704 >UniRef50_Q31GR6 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GR6_THICR Length = 566 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 59/164 (35%), Positives = 97/164 (59%), Gaps = 10/164 (6%) Query: 129 SNMDVLTGLPGRRVLDE-----SFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 +N D LT + RR + +FD Q N L ++LDID FK +ND++GH +GD+ Sbjct: 402 ANTDALTNVANRRAFNHFCEHLAFDSQ--NFYQGKLVALMLDIDFFKEINDSFGHSVGDI 459 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VL+ +A+ L + T+ + ++R GGEEF++++ E+A + RI ++ TH E Sbjct: 460 VLQKVASLLRNNTKSADKIFRMGGEEFLVLLLDTELEDAQKVAERIRAAIEEME-THKEN 518 Query: 244 H-INITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCM 285 I+ITV+ G++ PE+ L I AD+A+YE K++GRN+ + Sbjct: 519 KTISITVSIGMADFLPEDVSLLSTIQLADKALYEAKRSGRNKVV 562 >UniRef50_Q4KKJ4 Diguanylate cyclase, putative n=5 Tax=Pseudomonas fluorescens RepID=Q4KKJ4_PSEF5 Length = 727 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 66/195 (33%), Positives = 97/195 (49%), Gaps = 18/195 (9%) Query: 101 AHFDAFQEGLLSFTAALTDYKIYLLTIRSN--MDVLTGLPGRRVLDESFDHQLRNAEPL- 157 A + E + S Y+ +L R +D LTGLP R E +H++ + Sbjct: 537 ARLQSLAERVSSMEQEAQGYREHLEEQRQKALIDPLTGLPNRAAWSERLEHEVGQWQQHG 596 Query: 158 -NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVK- 215 +L L +LD+D FK +ND YGHL GD VL+ +A L R + + R+GGEEF++++ Sbjct: 597 NSLLLAMLDLDHFKRINDNYGHLAGDKVLKIIANVLRKRLRGSDFIARFGGEEFVLLLPN 656 Query: 216 -----AANDEEACRAGVRICQLVDNHAITHSEGH-INITVTAGVSRAFPEEPLDVVIGRA 269 EA RA + C H +G + ITV+ G+S + D+VI RA Sbjct: 657 TPWPVGVRIVEALRAAIEACPF-------HFKGEPVTITVSVGLSAFKAGDRSDLVIKRA 709 Query: 270 DRAMYEGKQTGRNRC 284 D+A+Y K GRNR Sbjct: 710 DQALYRAKDAGRNRV 724 >UniRef50_B1HWA5 Putative diguanylate cyclase (GGDEF domain) n=2 Tax=Bacillaceae RepID=B1HWA5_LYSSC Length = 325 Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 111/217 (51%), Gaps = 27/217 (12%) Query: 73 RLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMD 132 +L+++A+Q +E LA +E + + Q LL+ A+L + S D Sbjct: 124 KLLEAAYQE-----KEQALANLEQIY--VEIEQQQAKLLTVNASLVEL--------SETD 168 Query: 133 VLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 LTGL RR E + QL +A+P +L +LDID FK VNDT+GH +GD VL L Sbjct: 169 KLTGLKNRRFFQEKLEQQLNSYYESAKPFSL--CILDIDHFKKVNDTFGHQVGDDVLAQL 226 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH-SEGHINI 247 A L R +TV RYGGEEF++I+ A G +I + V A+ H G + I Sbjct: 227 AQLLTQRARKEDTVVRYGGEEFVMILPETEIAAAKEIGEQIRKTV---ALDHWPVGQVTI 283 Query: 248 TVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 ++ G++ ++ ++ AD A+Y K+ GRN+ Sbjct: 284 SI--GLATVTSKDTGTTLLKNADDALYASKKNGRNQV 318 >UniRef50_A6F6C4 GGDEF family protein n=1 Tax=Moritella sp. PE36 RepID=A6F6C4_9GAMM Length = 347 Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 59/163 (36%), Positives = 87/163 (53%), Gaps = 14/163 (8%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAE-PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLAT 190 D LTGL RRV + + N N ++++DID FK ND +GH +GD VL+ +A Sbjct: 186 DSLTGLLNRRVFSKEIETFCSNPTLNRNFSILMVDIDNFKAFNDDFGHQLGDQVLKAIAK 245 Query: 191 YLASWTRDYETVYRYGGEEFIIIVK------AANDEEACRAGVRICQLVDNHAITHSEGH 244 +A ++ E V+RYGGEEF++I+ A + E+ R + + D G Sbjct: 246 RIADSCQEGEQVFRYGGEEFVLILPNKTFTIARQNAESIRRAIERLSIRDKRT-----GK 300 Query: 245 I--NITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + NITV+ GVS P + ++ RAD +YE K+ GRNR M Sbjct: 301 VIDNITVSIGVSENKPRDTSHEILTRADLQLYEAKRLGRNRVM 343 >UniRef50_B1HZ30 Putative signaling membrane protein n=2 Tax=Bacillaceae RepID=B1HZ30_LYSSC Length = 309 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%) Query: 119 DYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGH 178 + KI LT + N+D LTG+P RR++D++ + N P ++L+D+D FK +NDTYGH Sbjct: 135 ESKITDLTEQLNVDSLTGIPNRRIMDQTLHELIINKVPH--AVILIDLDDFKSINDTYGH 192 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACR--AGVRICQLVDNH 236 +GD VL+ A ++ + +RYGGEEF+II+ + + +EA +R+ Q + Sbjct: 193 TVGDEVLKAFAHHMQLNMGEQGMCFRYGGEEFMIILPSRSIDEAVELAESLRVKQALQET 252 Query: 237 AITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCMFI 287 A +T++AG++ P + + +I AD A+Y+ KQ+GRN C+ + Sbjct: 253 ACGRP-----VTMSAGITAFTPNVQSPNQLIEIADHALYKAKQSGRN-CLCV 298 >UniRef50_A6FDJ0 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FDJ0_9GAMM Length = 399 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 90/159 (56%), Gaps = 3/159 (1%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 S +D LTGL RRVL +N+ + +M+ D+D FK VNDTYGH++GD VL Sbjct: 234 STVDSLTGLINRRVLMRQVTGIAKNSNAAQGSFSVMMFDLDYFKRVNDTYGHMVGDKVLV 293 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI-THSEGHI 245 +++ L R+Y+ + R+GGEEF++++ +A + +R+ + + ++ T + I Sbjct: 294 KVSSLLKQELRNYDVIARFGGEEFLVVMPHLELAQATQVALRVAEAIRKSSVMTDEQQEI 353 Query: 246 NITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + T + GV++ +E + + R D +Y+ K GR+R Sbjct: 354 SFTTSIGVTQYIADESIVQLFKRVDDLLYQAKVQGRDRV 392 >UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U4U5_MARAV Length = 571 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 63/166 (37%), Positives = 96/166 (57%), Gaps = 9/166 (5%) Query: 128 RSNMDVLTGLPGRRVLDESFDHQLRNA----EPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 +++ D LT L RR ++ L A EPL++ + +DID FK VNDT+GH +GD+ Sbjct: 398 QASTDPLTRLFNRRYFMAEGEYVLEQARTSGEPLSV--IAIDIDHFKAVNDTHGHNVGDL 455 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VL +A+ ++RD + V R+GGEEF+I++ A+ E RI V+ I +G Sbjct: 456 VLVEVASVFRQFSRDRDLVARFGGEEFVILLPGADLTEGFGCAERIRNAVEAMVIDGGDG 515 Query: 244 -HINITVTAGVSRAFP-EEPLDVVIGRADRAMYEGKQTGRNR-CMF 286 + +TV+ GV+ P E ++ + RADR++YE K GRNR C F Sbjct: 516 LAVRVTVSVGVAEVNPLLESVEGAVKRADRSLYEAKAGGRNRVCGF 561 >UniRef50_Q1JXL6 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXL6_DESAC Length = 368 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 8/168 (4%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 + +D LT + RR DESF Q + + E L ++L DID FK NDTYGH GD L Sbjct: 198 ARIDGLTQIANRRTFDESFTEQWQKSLVEQSPLSIILCDIDFFKRYNDTYGHQQGDTCLS 257 Query: 187 TLATYLASWTRDYET--VYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 ++A L + + V RYGGEEFI ++ A + EEA ++ A+ H Sbjct: 258 SVAQALEQTLSEQSSGLVARYGGEEFIFLLPATSVEEATAHAETARNNIEQLALEHQASE 317 Query: 245 I--NITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNRCMFID 288 + N+T++ GVS P+ + +I AD A+Y+ K+TGRNR ++ Sbjct: 318 VADNVTLSLGVSCTIPQSDMQPQHLIRTADEALYQSKETGRNRVTSVE 365 >UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21PN7_SACD2 Length = 565 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 6/163 (3%) Query: 128 RSNMDVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 ++ D LT LP R +E H+L R PL L + D+D FK +NDT+GH GD Sbjct: 403 KATHDPLTSLPNREAYNERAFHELHRFKRYGHPLTL--AVCDLDHFKKINDTFGHQAGDK 460 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VL+ +A +++ R+ + V RYGGEEF++++ + E+A ++ + + Sbjct: 461 VLKLVAQVVSTRLRNVDFVARYGGEEFVLVMPETDAEQAKTVLDKMRAAIAKTPFRFKDS 520 Query: 244 HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + IT++ G+ + E+ ++ RAD+A+YE K GRN+C+ Sbjct: 521 PVTITMSFGIVQFRGEDSVESAFARADKALYEAKANGRNQCVI 563 >UniRef50_B8FB82 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB82_DESAA Length = 309 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 59/157 (37%), Positives = 88/157 (56%), Gaps = 6/157 (3%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LT L R E+ D ++R A L L+L DID+FK NDTYGH+ GD L +A Sbjct: 144 DGLTKLYNSRHFYETLDVEIRRARRYGRPLSLLLFDIDKFKNFNDTYGHIEGDRALARIA 203 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN--HAITHSEGHINI 247 + R +T +RYGGEEF +++ ++EEA G R+C+ + H + + H+ I Sbjct: 204 RAVQDCIRLTDTAFRYGGEEFTVLMPETDEEEALGVGQRVCEEARDLVHRVDGKDVHLTI 263 Query: 248 TVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 +V GV++ P E L ++ R D AMY+ K+ G N+ Sbjct: 264 SV--GVTQCIPGEDLADMVKRVDEAMYKAKRAGGNQV 298 >UniRef50_Q0G1R3 Periplasmic sensor diguanylate cyclase (GGDEF) n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G1R3_9RHIZ Length = 442 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 84/158 (53%), Gaps = 13/158 (8%) Query: 132 DVLTGLPGRRVLDESF----DHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LTGLP RR D+S D + R P + L+L+DID FK VND +GH GD VLR+ Sbjct: 214 DSLTGLPNRRAFDQSVERLSDLRERGEVPGPVALLLIDIDHFKQVNDQWGHFFGDKVLRS 273 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 ++T + R + + RYGGEE +I+ + +AC RI V+N G + Sbjct: 274 VSTTIRRQVRRGDILARYGGEEIAVILPSTQHSDACSVAERIRMAVEN-------GEFRV 326 Query: 248 TVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQTGRNR 283 +TA V A E+ + ADRA+Y K+ GRNR Sbjct: 327 KITASVGVAIDEDINAFCDLFQAADRALYRAKKNGRNR 364 >UniRef50_Q223C6 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q223C6_RHOFD Length = 398 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 125 LTIRSNMDVLTGLPGRRVLDES----FDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 L ++ MD LTGL RR DE+ + R PL+L +++DID FK ND YGHL Sbjct: 208 LAQQTAMDGLTGLANRRRFDEALTVEWQRAARGRTPLSL--LMVDIDHFKNYNDNYGHLA 265 Query: 181 GDVVLRTLATYLASWTRDY-ETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 GD LR +++ L+ R E V RYGGEEF++++ A+ AC L+ + Sbjct: 266 GDQCLRRVSSVLSRCVRRAGELVARYGGEEFVLLLPGADMAHACEIAQMCLDLMQQECVA 325 Query: 240 H--SEGHINITVTAGVSRAFPEEPLD---VVIGRADRAMYEGKQTGR 281 H S + +T++ GV+ A P+ LD ++ AD AMY K +GR Sbjct: 326 HAASPTSVYVTLSIGVACALPDAMLDDPASLVNAADAAMYRAKSSGR 372 >UniRef50_C5BK03 Ggdef domain protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BK03_TERTT Length = 580 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 6/162 (3%) Query: 128 RSNMDVLTGLPGRRVLDESFDHQLRN----AEPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 R+ D LTGLP R +E + R + PL + + DID FK +ND +GH GD Sbjct: 413 RATHDSLTGLPNREAYNERVYQEYRRFTRYSRPLGI--AVCDIDHFKKINDNFGHQTGDR 470 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VL+ +A +++ R + V RYGGEEF+I++ + ++ +I V A + Sbjct: 471 VLKLIARLISTRLRKVDFVARYGGEEFVILLPETSASQSRSVLDKIRAAVAKAAFRFGDD 530 Query: 244 HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + IT++ G+S ++ ++ RAD+A+Y+ K GRNRC+ Sbjct: 531 PVKITLSFGISAFRSDDTIETAFQRADKALYQAKADGRNRCV 572 >UniRef50_UPI000185121C diguanylate cyclase n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI000185121C Length = 466 Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 98/191 (51%), Gaps = 18/191 (9%) Query: 108 EGLLSFTAALTDYKIYLLTIRSNM------DVLTGLPGRRVL----DESFDHQLRNAEPL 157 EGLL +T+ K ++S + D LTG+ RR +E+F P Sbjct: 274 EGLLIIFTDMTEVK----NLQSQLEHFAYYDELTGIYNRRAFFQYCEEAFQESKEQDTPF 329 Query: 158 NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAA 217 + LM DID FK VNDTYGH +GD VL +A S +E RYGGEEF++ VK Sbjct: 330 TIILM--DIDYFKKVNDTYGHSVGDQVLEQVAKVCQSQLHGHELFARYGGEEFVLGVKGY 387 Query: 218 NDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEG 276 +EE ++ V+ I +G I +T++ GV+ E E L ++ AD+A+Y Sbjct: 388 TEEEGAALAEQLRSEVEALTIHTPDGKITVTLSLGVAALTKEDEALYQILNHADQALYRA 447 Query: 277 KQTGRNR-CMF 286 K+ GRNR C++ Sbjct: 448 KEAGRNRVCVY 458 >UniRef50_Q0AG42 Diguanylate cyclase n=2 Tax=Nitrosomonas RepID=Q0AG42_NITEC Length = 551 Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 93/162 (57%), Gaps = 9/162 (5%) Query: 129 SNMDVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 S D LTGL R LD QL R+ P L+++DID FK +ND GH++GD + Sbjct: 388 SITDGLTGLYNRTKLDTILSEQLARFKRHDRPF--CLLMIDIDYFKTINDKLGHIVGDRI 445 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 L T+A+ L R + RYGG+EF++I+ N A + RI V++ + E Sbjct: 446 LVTVASVLLKSIRTIDYAARYGGDEFVVILTETNSSAAIKTAERIRAEVNSACLAFKEHP 505 Query: 245 INITVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQTGRNRC 284 +IT++ G+++++ ++ P D +I RAD A+YE K++GR+R Sbjct: 506 AHITLSIGITQSYYDDITPND-LIARADAALYEAKESGRDRV 546 >UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W8B7_MAGSA Length = 682 Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 19/228 (8%) Query: 70 PYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALT--DYKIYLLTI 127 P RL +S H + RE ++ W D E + ++ LT D + + Sbjct: 180 PLTRLRNSLHHNASVLMREPLV------WSSR--DELGEVVHAYNQLLTEIDQRTEDIHQ 231 Query: 128 RSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVL 185 +N D+LTGLP RR+L++ H + A N + L+ DID FK+VNDT GH GD +L Sbjct: 232 LANRDLLTGLPNRRLLEDRIGHAIALAGRQNRSIALLFADIDNFKVVNDTLGHKQGDALL 291 Query: 186 RTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH- 244 R +A + R +TV R+GG+EF+I+V++ N A A +L++ + G Sbjct: 292 RIIADRIHDIMRGMDTVARWGGDEFVIVVESLNS--AGEAASVAEKLIETIGVPVQLGSN 349 Query: 245 -INITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNRCMFIDE 289 + + V+ G+S +P++ D+ +I AD A++E K GRN F D+ Sbjct: 350 LLRVGVSVGIS-MYPQDGADITTLIKNADMALFEAKGRGRNTFHFFDQ 396 >UniRef50_Q7UXF6 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UXF6_RHOBA Length = 322 Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 69/179 (38%), Positives = 96/179 (53%), Gaps = 27/179 (15%) Query: 123 YLLTIRSNMDVLTGLPGRRVLDESFDHQLR--NAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 YL R+ D LTGL RR D+ D A + L+L+DID FK++NDT+GH I Sbjct: 143 YLTEART--DGLTGLFNRRAFDKKLDELFSAYRAGGKSFTLILMDIDHFKMINDTHGHPI 200 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIII----VKAANDEEACRAGVRICQLVD-- 234 GD+VL+ ++ L +D E V R+GGEEF I+ ++AA D +I +L D Sbjct: 201 GDIVLQQISQRLGHGMQDAEIVSRFGGEEFAILTHLPIRAAAD--------KINKLRDRI 252 Query: 235 -NHAITHSEGHINITVTAGVSRAFPEEPLDVVIG----RADRAMYEGKQTGRNRCMFID 288 N + + +T++ G+S P E D+VIG RAD A+Y K GRNR F D Sbjct: 253 ANDPVDAGSAELQVTLSVGLST--PHE--DLVIGPIVRRADEALYSAKNMGRNRVYFND 307 >UniRef50_B5ETB5 Sensory transduction protein kinase n=3 Tax=Aliivibrio RepID=B5ETB5_VIBFM Length = 444 Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 63/188 (33%), Positives = 109/188 (57%), Gaps = 12/188 (6%) Query: 105 AFQEGLLSFTAALTDYKIYL-LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLML 163 +F + F AAL Y Y+ ++I + D +TG R + ++ +L+ E + ++ Sbjct: 264 SFYISFIVFFAALCGYYFYVKVSIMRSYDHMTGFYRR----DFYEPKLKALESASF--LM 317 Query: 164 LDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEAC 223 +DID FK VNDTYGH GD+V++ ++ + + R + R+GGEEFI+I + + ++ Sbjct: 318 IDIDHFKRVNDTYGHDFGDIVIQQVSYRIKNCIRVNDIAIRWGGEEFIVIFQKIDQDDLM 377 Query: 224 RAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 I ++++N +I +G INIT++ G ++ E ++ VI RAD A+Y+ K TGRNR Sbjct: 378 NKAEVIRKVIENKSI---DG-INITISIGGAKQRDFESVNEVIKRADAALYDSKNTGRNR 433 Query: 284 CMFIDEQN 291 +D+ N Sbjct: 434 VT-LDKNN 440 >UniRef50_A4C484 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C484_9GAMM Length = 513 Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 6/163 (3%) Query: 128 RSNMDVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 +S D LT LP R DE F + RN + NL L+++D+D FK +ND++GH GD Sbjct: 351 KSLQDSLTKLPNRAAFDERFQLEFNSFKRNNK--NLCLVVIDVDHFKRINDSFGHSAGDK 408 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 L+ +A+ L R+ + + R+GGEEFIII+ + ++ + +I + + + Sbjct: 409 TLQVIASALKKTVRNTDFIARFGGEEFIIIMPDTDLKQIIQPLEKIRKAIKAIPFKFKDT 468 Query: 244 HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + IT++ G ++ + V RAD A+YE K+TGR+R + Sbjct: 469 SVQITISIGATQFMSVDTTQEVFDRADDALYEAKRTGRDRLVI 511 >UniRef50_A6Q9W1 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q9W1_SULNB Length = 866 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 4/161 (2%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLNLYL--MLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 DVLT LP R +L + L ++ NL L +DID FK +NDTYGH GD +L TL+ Sbjct: 321 DVLTSLPNRVLLADRLSQALHSSRRNNLVLGVAFIDIDGFKEINDTYGHNTGDDLLITLS 380 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + + R+ +T+ R GG+EFI++ E C + V + I + ++++ Sbjct: 381 SRMKGALRNNDTLARIGGDEFIVVFTDLKKPEDCHPMLERLLQVTSAPIILNNKSMSVSA 440 Query: 250 TAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNRCMFID 288 + G+S A P++ +D +I +AD+AMY+ KQ+G+NR D Sbjct: 441 SIGLSIAAPDKEIDADQLIRQADQAMYQAKQSGKNRYSVFD 481 >UniRef50_Q2JJF5 Response regulator n=2 Tax=Synechococcus RepID=Q2JJF5_SYNJB Length = 364 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 88/170 (51%), Gaps = 11/170 (6%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN------LYLMLLDIDRFKLVNDTYG 177 LL S D LTG RR LD++ H L+ P L L+++D+D FK VND+YG Sbjct: 179 LLESLSLTDPLTGALNRRALDQALPHLLKQVGPRGEARYRYLCLLMMDVDHFKQVNDSYG 238 Query: 178 HLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHA 237 H IGD VL+ + L + R +YRYGGEEF+ + + R + Q + Sbjct: 239 HYIGDCVLQAIVGRLQNQLRPSSLLYRYGGEEFVCVTPGLSPPRCGRYAESLRQAIAKRP 298 Query: 238 ITHSEGH-INITVTAG---VSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 I S + +T++ G +S + EP + + +AD A+Y+ KQ GRNR Sbjct: 299 IDISPKRSLPVTISIGGIVLSEDYCPEP-ETALQQADSALYQAKQAGRNR 347 >UniRef50_Q24NT2 Putative uncharacterized protein n=2 Tax=Desulfitobacterium hafniense Y51 RepID=Q24NT2_DESHY Length = 232 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 8/172 (4%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 +L R D LTGL RR LD +L ++ L ++ +DID F++ N+ YGH GD Sbjct: 67 ILKSRLTTDKLTGLLNRRALD----LELNSSNELIYSVIFIDIDNFRVFNNQYGHKAGDT 122 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VLR ++ + + R + YRYGGEE +II+K N + A R +I +D + ++ Sbjct: 123 VLRKVSETIETTIRVGDRAYRYGGEEIVIILKDCNQKNAQRIAEKIRTRID---MLSNDP 179 Query: 244 HINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVIN 294 + IT++ GV+ E EP+ VI +AD A+ + K G+NR + +N IN Sbjct: 180 YPQITISLGVASCSEESEPIQDVIEKADFALLQAKGAGKNRTIVFHPKNKIN 231 >UniRef50_B6JIE5 Cellulose synthesis regulatory protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JIE5_OLICO Length = 397 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 5/159 (3%) Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATY 191 D LTGL RR L FD R A P+ + ++ D+D FK VND +GH +GD VL+T A+ Sbjct: 223 DSLTGLLNRRAL---FDKSQRVAAPVAV--VVFDVDHFKAVNDRHGHQVGDTVLQTFASL 277 Query: 192 LASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTA 251 LA+ TR+ + R GGEEF+I++ +A + R+ + + S G +TV+A Sbjct: 278 LAANTREGDLAARLGGEEFVIVLSGTMAAQAMQVAERVRESLAGQRFISSSGDFGVTVSA 337 Query: 252 GVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 GV+ E + ++ RAD A+Y+ K TGRNR + + Sbjct: 338 GVACENGEVDIIALLRRADFALYDAKHTGRNRVLLSSSE 376 >UniRef50_B9QXS5 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QXS5_9RHOB Length = 307 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 9/170 (5%) Query: 117 LTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTY 176 L Y+ L T D LTG+P RR L+ +L A+ L+L++ L+DID FK +ND + Sbjct: 141 LRAYQAELFT-----DALTGVPNRRFLEAELPARLSAAD-LSLHIALIDIDHFKKINDAH 194 Query: 177 GHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNH 236 GH+IGD +R +A + + R + + RYGGEEF ++ E I + Sbjct: 195 GHVIGDHAIRVVARLIQTHLRPQDVLCRYGGEEFCVLFYNTEPAECLSLLETIRSDISRR 254 Query: 237 AITHS---EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 I H+ + +T++AG++++ P + L+ + RAD MY K TGRNR Sbjct: 255 TIYHNRTGQSFGPMTISAGLAQSQPGDDLETALQRADAQMYAAKSTGRNR 304 >UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCX8_9BURK Length = 600 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/167 (34%), Positives = 90/167 (53%), Gaps = 9/167 (5%) Query: 129 SNMDVLTGLPGRR----VLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 S +D LTG+ RR VL + + R +PL L ++LD+D FK ND +GH GD Sbjct: 432 SMVDGLTGIANRRHFDQVLHKEWTRLERAGQPLAL--VMLDVDWFKRYNDHFGHQAGDEC 489 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS--- 241 LR +A ++ +R + V RYGGEEF+II + +A + R C V + H Sbjct: 490 LRAVAQAISGVSRASDLVARYGGEEFVIIAPGTDGPQALQMAQRACDAVRALGMPHPLAY 549 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 E + ++ V+ P++ L+ ++G+AD A+YE K GRNR + + Sbjct: 550 EAVVTVSCGVAVTVPGPDDSLENLLGQADDALYEAKAQGRNRVVLAE 596 >UniRef50_B1I5R0 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I5R0_DESAP Length = 314 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 90/166 (54%), Gaps = 10/166 (6%) Query: 129 SNMDVLTGLPGRRVLDESFD----HQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 ++ D LTGLP RRVL E + +R P+ + M D+D FK +ND Y HL GD V Sbjct: 138 ASTDALTGLPNRRVLLEHLEALVARGIREGRPVGVIFM--DLDHFKRINDEYSHLAGDTV 195 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG- 243 L+ +A L + R Y+ + RYGGEEF+I+V+ + A R Q + + + G Sbjct: 196 LQDVAKKLRAVKRVYDFLGRYGGEEFLILVEGVDIVTAGAIAERFRQSIKSTPVKLDSGV 255 Query: 244 HINITVTAGVSRAFPEEP--LDVVIGRADRAMYEGKQTGRNR-CMF 286 + +T + GV+ P P +D +I AD+A+Y K GR+R C F Sbjct: 256 SLRVTASFGVTALNPAAPQSVDRLIAEADQALYSAKAQGRDRVCCF 301 >UniRef50_A2SJS1 GGDEF domain containing protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SJS1_METPP Length = 568 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 94/171 (54%), Gaps = 7/171 (4%) Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFD-HQLRN-----AEPLNLYLMLLDIDRFKLVND 174 +I L+ + D LT + RR L ++F+ Q +N E L + L+DID FK +ND Sbjct: 395 EIRRLSDEVSTDPLTQIANRRGLQQAFETEQAKNQRAAQGEGATLAVALIDIDNFKKLND 454 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 GH GD L+ L +A R +T+ RYGGEEF++++ +EA R R+ + + Sbjct: 455 RLGHASGDAALQFLTHRVAQALRPGDTLARYGGEEFVVLLPGTPLDEAQRVLTRVQRTLS 514 Query: 235 NHA-ITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 ++ +G + +T +AGVS P E L+ + RAD A+YE K +G+NR Sbjct: 515 AELFMSDEQGQVFVTFSAGVSLYRPGERLEQSLERADEALYEAKHSGKNRT 565 >UniRef50_C4LEB0 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LEB0_TOLAT Length = 543 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 95/161 (59%), Gaps = 7/161 (4%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 ++ DVLTGLP R + + +R+A+ NL LM LD+D+FK VNDT+GH +GD +L+ Sbjct: 382 AHYDVLTGLPTRVLFSDRLKQAMRSAKRNKKNLALMFLDLDKFKPVNDTFGHAVGDRLLK 441 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIV-KAANDEEACRAGVRICQLVDNHAITHSEGHI 245 +A+ + R+ +TV R GG+EF+I++ A+ E A +I Q + N + + Sbjct: 442 EVASRMLGCVRESDTVCRIGGDEFVILLHDVADAESAFNVAEKIRQAL-NQPFKLAGHQM 500 Query: 246 NITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNRC 284 NI+ + G++ +PE +D + AD AMY K+ GR++ Sbjct: 501 NISCSIGIA-LYPENGVDERTLTKNADMAMYRAKENGRDQA 540 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 8/166 (4%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAE----PLNLYLMLLDIDRFKLVNDTYGHLI 180 L ++ +D LTG+ RR E + +++ PL+ ++ LDID FK VNDTYGH Sbjct: 423 LKRQARIDFLTGVSNRRYFMEQAEQEIQRTSRYDTPLSFFM--LDIDLFKQVNDTYGHKS 480 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRI-CQLVDNHAIT 239 GD+VL+ +A+ R+ + + R GGEEF I++ + +A R+ L D T Sbjct: 481 GDIVLKRMASVCRETLREIDIIGRVGGEEFAILLPETDKAQAAEVAERLRSVLADEKVPT 540 Query: 240 HSEGHINITVTAGV-SRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + I TV+ GV SR ++ +D+++ AD A+Y+ K+ GRNR Sbjct: 541 EAGAPIQFTVSIGVASRVSSQDNIDMLLNLADEALYQAKKYGRNRV 586 >UniRef50_A6C9X3 GGDEF domain-like protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C9X3_9PLAN Length = 657 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 86/160 (53%), Gaps = 10/160 (6%) Query: 132 DVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LT R +E+F+ +L R+A+P+ + + DIDRFK +NDTYGH GD+VL+ Sbjct: 345 DPLTKTYNRSYFNENFEKELYSCSRDAQPIGI--IFSDIDRFKNLNDTYGHQFGDLVLQR 402 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 +A + TR + RYGGEEF+I+V + R+ +L++N I + + Sbjct: 403 VAKVASESTRRSDVFCRYGGEEFVIMVNNPTENGIRDLAERLRKLIENEVIEFEGARVPV 462 Query: 248 TVTAGVSRAFPEEPL----DVVIGRADRAMYEGKQTGRNR 283 T + G P L + ++ AD AMYE K+ GRN+ Sbjct: 463 TASLGAVVGIPPRDLTGFAERLVAEADEAMYESKENGRNQ 502 >UniRef50_A8VS95 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VS95_9BACI Length = 615 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/177 (37%), Positives = 101/177 (57%), Gaps = 9/177 (5%) Query: 114 TAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKL 171 T L D +L T+ S +D LTGLP RR+ DE ++ E L L++LDID +K Sbjct: 433 TEELNDTMKHLKTL-SELDGLTGLPNRRMFDEDLITVVKETMDENGKLGLVMLDIDNYKN 491 Query: 172 VNDTYGHLIGDVVLRTLATYLASWTR--DYETVYRYGGEEFIIIVKAANDEEACRAGVRI 229 ND YGHL GD L+ +AT + D VYRYGGEEF ++VK A++ E +I Sbjct: 492 YNDFYGHLQGDDCLKEVATLFKQVIKEEDSAEVYRYGGEEFAVLVKEASEAETYALAEQI 551 Query: 230 CQLVDNHAITHSEGHIN--ITVTAGVS--RAFPEEPLDVVIGRADRAMYEGKQTGRN 282 + V+ AI H + + +TV+AGV+ +A + ++ +AD A+Y+ K++G+N Sbjct: 552 RKRVEEAAIPHEQSDVQNRLTVSAGVAVLQARDLHSPEKLLEQADAALYQAKRSGKN 608 >UniRef50_C4FJS9 Signal transduction response regulator n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FJS9_9AQUI Length = 349 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 2/159 (1%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLR--NAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 + +D LTGL RR D + + ++ N + + L+LLD+D FK +ND +GH GD+VL+ Sbjct: 188 ATLDFLTGLTNRRSFDRALNDLIKDFNEKKIPFTLILLDLDNFKQINDKFGHPAGDLVLK 247 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 ++ L ++ R + R GGEEF II+ E I +++NH I + I Sbjct: 248 EVSNLLRTYLRANTIIGRLGGEEFGIILPNVTLENGKNVAEIIRNVIENHEIKYDGNVIR 307 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 I+ + GV++ + +D + R D A+Y+ K+ G+N+ + Sbjct: 308 ISASLGVAQVKEGDTIDTIYRRVDEALYQAKRDGKNKVV 346 >UniRef50_Q31JG8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31JG8_THICR Length = 461 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/162 (37%), Positives = 90/162 (55%), Gaps = 10/162 (6%) Query: 131 MDVLTGLPGRRV----LDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 +D LT + RR L E F +R E +L L ++DID FK VNDTYGHL+GD ++ Sbjct: 293 IDSLTAIYNRRFGMDRLREDFSRAVR--EQSSLSLAMVDIDHFKSVNDTYGHLVGDKAIK 350 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 +AT + R+ + V RYGGEEF++I+ A+ A RI V + I Sbjct: 351 LIATIIKKTLREGDIVVRYGGEEFLMILHGASSTNARNVCERIRHQVKDTFFKEGNQQIQ 410 Query: 247 ITVTAGVSRAFPEEPLD---VVIGRADRAMYEGKQTGRNRCM 285 +TV+ G++ A+PE+ +I AD+A+Y K+ GRNR + Sbjct: 411 LTVSIGIA-AYPEQQAGDEMALIHMADQALYYAKEGGRNRVV 451 >UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV3_9DELT Length = 519 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 12/163 (7%) Query: 129 SNMDVLTGLPGRRVLDESFDHQL----RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 + D LTGL RR E D +L R +PL+L ++ DID FK VNDTYGH GD+V Sbjct: 351 AGTDQLTGLNNRRRFKELLDQELIRYRRIPKPLSL--LIFDIDHFKRVNDTYGHETGDLV 408 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 L+ +A L + R +T R+GGEEF++++ A E A ++ Q ++ H Sbjct: 409 LKEMAQLLQATVRRTDTPARWGGEEFLVLLPATTAEAAMALAEKLRQAIEEHDFPRVG-- 466 Query: 245 INITVTAGVSRAF--PEEPLDVVIGRADRAMYEGKQTGRNRCM 285 +T + GV+ AF E+ ++ R D+A+Y+ K+ GRNR + Sbjct: 467 -RVTASFGVA-AFHDGEQEESALLRRVDKALYQAKRQGRNRVV 507 >UniRef50_Q0VMI3 GGDEF domain protein n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VMI3_ALCBS Length = 402 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 96/163 (58%), Gaps = 11/163 (6%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLR----NAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 S D LTGL RR DE+FD + R + +PL + ML+D+DRFK ND YGHL GD Sbjct: 228 SREDSLTGLANRRFFDEAFDREWRRCKRSQQPLTV--MLVDVDRFKAYNDGYGHLQGDSC 285 Query: 185 LRTLATYLASWTRDY-ETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 L+ LA L ++R + V R+GGEEF ++ ++ EA + R+C+ V + AI H++ Sbjct: 286 LQKLAAELHRYSRRAGDLVARFGGEEFALLYPETDELEAQQLASRLCRSVRSLAIPHADS 345 Query: 244 -HIN-ITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRN 282 +N +TV+ GV+ P + ++ AD+A+Y KQ GR+ Sbjct: 346 PEMNEVTVSVGVATMIPNQRHSAGDLLEAADQALYLVKQGGRD 388 >UniRef50_C6P797 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P797_9PROT Length = 830 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 94/166 (56%), Gaps = 9/166 (5%) Query: 128 RSNMDVLTGLPGRRVLDESFDHQLR--NAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVL 185 ++N D LTGLP RR+ + +H+++ N E L L LM +D+D+FK VNDT GH GD++L Sbjct: 399 QANFDPLTGLPNRRMFQDRLEHEIKKSNREGLPLALMFIDLDKFKEVNDTLGHDKGDILL 458 Query: 186 RTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH---SE 242 A ++ R+ +TV R GG+EF +I+ +D + RI Q + + +E Sbjct: 459 VEAAQRISGCVRESDTVARLGGDEFTVILSELDDANSIE---RIAQAIIQALVAPFLLAE 515 Query: 243 GHINITVTAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRNRCMFI 287 ++ + G++ + P L++++ AD+AMY K GRNR + Sbjct: 516 EVAFVSASIGITLYPNDAPNLELLMSNADQAMYASKSAGRNRFSYF 561 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P31129 Uncharacterized protein ydeH n=55 Tax=Enterobact... 436 e-121 UniRef50_B1ELX2 Diguanylate cyclase (GGDEF) domain protein n=3 T... 421 e-116 UniRef50_A4W9G8 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638... 304 2e-81 UniRef50_C9XU93 Putative uncharacterized protein n=1 Tax=Cronoba... 294 3e-78 UniRef50_Q0EXC9 Signaling protein with a GGDEF domain n=1 Tax=Ma... 282 9e-75 UniRef50_C8Q5F4 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 280 5e-74 UniRef50_A4U5Q6 GGDEF domain protein n=2 Tax=Magnetospirillum Re... 279 7e-74 UniRef50_A6VSB0 Diguanylate cyclase n=2 Tax=Gammaproteobacteria ... 266 5e-70 UniRef50_C6BU46 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 264 3e-69 UniRef50_Q2BRK2 Signaling protein with a GGDEF domain n=1 Tax=Ne... 255 9e-67 UniRef50_A8UZ69 Putative uncharacterized protein n=1 Tax=Hydroge... 255 1e-66 UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium... 251 2e-65 UniRef50_C0QQG6 Signal transduction response regulator n=1 Tax=P... 250 4e-65 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 248 1e-64 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 246 5e-64 UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter di... 246 7e-64 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 1e-63 UniRef50_Q47FN5 Response regulator receiver modulated diguanylat... 244 2e-63 UniRef50_C0QSI7 Diguanylate cyclase with GAF sensor n=1 Tax=Pers... 243 5e-63 UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 243 5e-63 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 241 2e-62 UniRef50_C9RM68 Diguanylate cyclase n=1 Tax=Fibrobacter succinog... 241 2e-62 UniRef50_Q1ZGY5 GGDEF domain protein n=1 Tax=Psychromonas sp. CN... 240 4e-62 UniRef50_Q4KKJ4 Diguanylate cyclase, putative n=5 Tax=Pseudomona... 239 9e-62 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 239 9e-62 UniRef50_C1DXV0 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 239 9e-62 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 239 9e-62 UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7... 238 2e-61 UniRef50_A6X556 Diguanylate cyclase n=1 Tax=Ochrobactrum anthrop... 238 2e-61 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 237 3e-61 UniRef50_C7HZA2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 237 3e-61 UniRef50_A1S6F8 Diguanylate cyclase n=2 Tax=Shewanella RepID=A1S... 237 3e-61 UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 237 4e-61 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 237 4e-61 UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing pr... 237 4e-61 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 237 4e-61 UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 236 5e-61 UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgar... 236 6e-61 UniRef50_A8ESJ8 GGDEF domain protein n=1 Tax=Arcobacter butzleri... 236 6e-61 UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 236 7e-61 UniRef50_Q2RLY1 Diguanylate cyclase (GGDEF domain) n=1 Tax=Moore... 236 8e-61 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 236 8e-61 UniRef50_C6DCR6 Diguanylate cyclase n=6 Tax=Pectobacterium RepID... 236 9e-61 UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 236 9e-61 UniRef50_B9Z5H6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 235 1e-60 UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 235 1e-60 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 235 1e-60 UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alterom... 235 1e-60 UniRef50_A8UV88 Putative uncharacterized protein n=1 Tax=Hydroge... 235 2e-60 UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 235 2e-60 UniRef50_D2L2K3 Diguanylate cyclase with GAF sensor n=1 Tax=Desu... 235 2e-60 UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 235 2e-60 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 234 2e-60 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 234 3e-60 UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 234 3e-60 UniRef50_B4SPL2 Diguanylate cyclase n=3 Tax=Stenotrophomonas Rep... 234 3e-60 UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Breviba... 234 4e-60 UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfo... 234 4e-60 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 234 4e-60 UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrery... 234 4e-60 UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydroge... 233 4e-60 UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 233 5e-60 UniRef50_C5T761 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 233 7e-60 UniRef50_C6D9C2 Diguanylate cyclase n=5 Tax=Pectobacterium RepID... 233 8e-60 UniRef50_C5BK03 Ggdef domain protein n=1 Tax=Teredinibacter turn... 232 9e-60 UniRef50_C1XYG3 Diguanylate cyclase (GGDEF) domain-containing pr... 232 1e-59 UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing pr... 232 1e-59 UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thioox... 232 1e-59 UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 232 1e-59 UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 232 1e-59 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 232 1e-59 UniRef50_B1KP16 Diguanylate cyclase n=6 Tax=Proteobacteria RepID... 231 2e-59 UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales Rep... 231 2e-59 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 231 2e-59 UniRef50_B1KK06 7TM domain sensor diguanylate cyclase n=1 Tax=Sh... 231 2e-59 UniRef50_B0KCF6 Diguanylate cyclase with GAF sensor n=12 Tax=The... 231 2e-59 UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curviba... 231 2e-59 UniRef50_Q39SX4 Diguanylate cyclase (GGDEF domain) n=1 Tax=Geoba... 231 2e-59 UniRef50_B5EIX9 Diguanylate cyclase n=2 Tax=Geobacter RepID=B5EI... 231 2e-59 UniRef50_B7RW73 GGDEF domain protein n=1 Tax=marine gamma proteo... 231 3e-59 UniRef50_Q4ZZT3 GGDEF n=5 Tax=Pseudomonas syringae group RepID=Q... 231 3e-59 UniRef50_C0QMB4 ABC-type nitrate/sulfonate/bicarbonate transport... 231 3e-59 UniRef50_B8JB86 Diguanylate cyclase n=4 Tax=Anaeromyxobacter Rep... 231 3e-59 UniRef50_C6P3N4 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 230 3e-59 UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus L... 230 3e-59 UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 230 3e-59 UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix oren... 230 4e-59 UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum... 230 4e-59 UniRef50_Q2Y8W7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Nitro... 230 4e-59 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 230 4e-59 UniRef50_C5UZW0 Diguanylate cyclase n=2 Tax=Gallionellaceae RepI... 230 4e-59 UniRef50_D2C2R9 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 230 5e-59 UniRef50_Q30UV1 Diguanylate cyclase n=1 Tax=Desulfovibrio desulf... 230 5e-59 UniRef50_Q31IH0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 230 5e-59 UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliil... 230 6e-59 UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 T... 230 7e-59 UniRef50_A5UZW7 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 229 7e-59 UniRef50_A4VQF4 GGDEF domain protein n=3 Tax=Proteobacteria RepI... 229 8e-59 UniRef50_C4XNA6 Response regulator receiver protein n=2 Tax=Desu... 229 8e-59 UniRef50_A4BD76 GGDEF domain protein n=1 Tax=Reinekea blandensis... 229 8e-59 UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 229 9e-59 UniRef50_Q39S35 Diguanylate cyclase with GAF sensor n=2 Tax=Geob... 229 9e-59 UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3... 229 9e-59 UniRef50_A8UT68 Putative uncharacterized protein n=2 Tax=Aquific... 229 1e-58 UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 229 1e-58 UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=N... 229 1e-58 UniRef50_A8TN49 Putative uncharacterized protein n=1 Tax=alpha p... 229 1e-58 UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hy... 228 1e-58 UniRef50_Q04S93 GGDEF domain receiver component of a two-compone... 228 1e-58 UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 228 1e-58 UniRef50_Q2SD41 Response regulator containing a CheY-like receiv... 228 2e-58 UniRef50_B1Y766 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii... 228 2e-58 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 228 2e-58 UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n... 228 2e-58 UniRef50_A8FRI3 Putative diguanylate cyclase (GGDEF domain) n=1 ... 228 2e-58 UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 228 2e-58 UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8F... 228 2e-58 UniRef50_Q31M78 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 228 2e-58 UniRef50_B9Z7N2 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 228 2e-58 UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptu... 227 3e-58 UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 227 3e-58 UniRef50_D1B7Z4 Sensor protein n=1 Tax=Thermanaerovibrio acidami... 227 3e-58 UniRef50_Q6WLF6 Putative uncharacterized protein n=1 Tax=uncultu... 227 3e-58 UniRef50_B4S1M7 GGDEF domain protein n=1 Tax=Alteromonas macleod... 227 3e-58 UniRef50_B3E3B5 Diguanylate cyclase with GAF sensor n=1 Tax=Geob... 227 3e-58 UniRef50_Q21GT7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 227 4e-58 UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzer... 227 4e-58 UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliob... 227 4e-58 UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein... 226 5e-58 UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesi... 226 5e-58 UniRef50_B9ZP43 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 226 5e-58 UniRef50_Q2BQN9 Diguanylate cyclase, putative n=1 Tax=Neptuniiba... 226 5e-58 UniRef50_B6BKB0 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 226 5e-58 UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 226 5e-58 UniRef50_B3QH74 Diguanylate cyclase n=14 Tax=Bradyrhizobiaceae R... 226 6e-58 UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobac... 226 6e-58 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 226 6e-58 UniRef50_Q2W7A4 Response regulator n=4 Tax=Proteobacteria RepID=... 226 6e-58 UniRef50_C1SHV7 Diguanylate cyclase (GGDEF) domain-containing pr... 226 6e-58 UniRef50_Q085X7 Diguanylate cyclase n=2 Tax=Alteromonadales RepI... 226 7e-58 UniRef50_A0LAY9 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC... 226 7e-58 UniRef50_B8GTD8 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 226 8e-58 UniRef50_B5ZG65 Diguanylate cyclase with PAS/PAC sensor n=4 Tax=... 226 8e-58 UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 226 9e-58 UniRef50_A1TUA2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 226 9e-58 UniRef50_C6BZS4 Diguanylate cyclase with PAS/PAC and GAF sensors... 225 1e-57 UniRef50_A9B3D1 Diguanylate cyclase n=2 Tax=Bacteria RepID=A9B3D... 225 1e-57 UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 225 1e-57 UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepI... 225 1e-57 UniRef50_D2R0A0 Diguanylate cyclase n=1 Tax=Pirellula staleyi DS... 225 1e-57 UniRef50_B2UI26 Diguanylate cyclase with GAF sensor n=2 Tax=Rals... 225 2e-57 UniRef50_C1ZLY6 Diguanylate cyclase (GGDEF) domain-containing pr... 225 2e-57 UniRef50_A8UY33 Putative uncharacterized protein n=1 Tax=Hydroge... 225 2e-57 UniRef50_B6BJ77 Signal transduction response regulator-chey like... 225 2e-57 UniRef50_A8TQW5 GGDEF domain n=1 Tax=alpha proteobacterium BAL19... 225 2e-57 UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter sal... 225 2e-57 Sequences not found previously or not previously below threshold: UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 244 3e-63 UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 243 7e-63 UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 242 9e-63 UniRef50_A1U2H0 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 242 1e-62 UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoe... 240 6e-62 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 238 1e-61 UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 237 4e-61 UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepI... 236 5e-61 UniRef50_Q2SPL3 Response regulator containing a CheY-like receiv... 236 7e-61 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 236 8e-61 UniRef50_A1KC37 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 R... 236 9e-61 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 235 1e-60 UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 233 7e-60 UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desul... 233 7e-60 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 233 7e-60 UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 231 3e-59 UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4... 231 3e-59 UniRef50_Q1MYJ5 Response regulator containing a CheY-like receiv... 230 4e-59 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 230 4e-59 UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 230 4e-59 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 230 5e-59 UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax... 230 5e-59 UniRef50_UPI0001AF5018 diguanylate cyclase, putative n=1 Tax=Pse... 230 6e-59 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 230 6e-59 UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 230 6e-59 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 229 8e-59 UniRef50_A6VEW2 Ggdef domain protein n=8 Tax=Pseudomonas RepID=A... 229 8e-59 UniRef50_Q5SHT9 GGDEF domain protein n=2 Tax=Thermus thermophilu... 229 1e-58 UniRef50_A0YNV2 Regulatory component of sensory transduction sys... 229 1e-58 UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepI... 228 1e-58 UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnet... 228 2e-58 UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 228 2e-58 UniRef50_Q2RNW0 Putative diguanylate cyclase (GGDEF domain) n=1 ... 228 2e-58 UniRef50_A8UWP4 Response regulator containing a CheY-like receiv... 228 2e-58 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 228 2e-58 UniRef50_Q2T680 GGDEF domain protein n=32 Tax=Burkholderia RepID... 228 2e-58 UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=P... 228 2e-58 UniRef50_C1D915 GGDEF domain protein n=1 Tax=Laribacter hongkong... 228 2e-58 UniRef50_C7RTE2 Diguanylate cyclase with hemerythrin-like metal-... 228 2e-58 UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 228 2e-58 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 228 3e-58 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 228 3e-58 UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG8... 228 3e-58 UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acid... 227 3e-58 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 227 3e-58 UniRef50_C4XH70 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 227 3e-58 UniRef50_Q216C5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodo... 227 3e-58 UniRef50_B1J820 Diguanylate cyclase n=1 Tax=Pseudomonas putida W... 227 3e-58 UniRef50_Q1J085 Diguanylate cyclase n=1 Tax=Deinococcus geotherm... 227 3e-58 UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clos... 227 4e-58 UniRef50_Q1MZ89 Response regulator containing a CheY-like receiv... 227 4e-58 UniRef50_Q1YG68 GGDEF domain protein n=1 Tax=Aurantimonas mangan... 227 4e-58 UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthono... 227 4e-58 UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobact... 227 4e-58 UniRef50_B0SEM7 GGDEF domain protein n=2 Tax=Leptospira biflexa ... 226 5e-58 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 226 5e-58 UniRef50_C6P3V9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 226 6e-58 UniRef50_Q2SUR3 GGDEF domain protein n=54 Tax=Burkholderiaceae R... 226 6e-58 UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curviba... 226 6e-58 UniRef50_Q1K485 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 226 6e-58 UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromob... 226 6e-58 UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 226 6e-58 UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnic... 226 7e-58 UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthono... 226 8e-58 UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 226 8e-58 UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clos... 226 8e-58 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 226 8e-58 UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodi... 226 9e-58 UniRef50_Q21VE2 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 226 9e-58 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 226 9e-58 UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=... 226 1e-57 UniRef50_B8GC13 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 226 1e-57 UniRef50_A5D1G5 Hypothetical signaling protein n=1 Tax=Pelotomac... 225 1e-57 UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 225 1e-57 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 225 1e-57 UniRef50_B1X1R3 Putative adenylate cyclase n=1 Tax=Cyanothece sp... 225 1e-57 UniRef50_C6CQG0 Diguanylate cyclase n=7 Tax=Enterobacteriaceae R... 225 1e-57 UniRef50_C8X2T0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 225 1e-57 UniRef50_A4XVW9 Periplasmic/7TM domain sensor diguanylate cyclas... 225 1e-57 UniRef50_C7HZC5 Diguanylate cyclase n=1 Tax=Thiomonas intermedia... 225 1e-57 UniRef50_A8ZVJ7 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 225 1e-57 UniRef50_B0TJ24 Periplasmic/7TM domain sensor diguanylate cyclas... 225 1e-57 UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 225 1e-57 UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 225 1e-57 UniRef50_A8IQ43 Putative diguanylate cyclase (DGC) n=1 Tax=Azorh... 225 1e-57 UniRef50_C0QFG9 Signal transduction family protein (GGDEF domain... 225 2e-57 UniRef50_C7LVZ4 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 225 2e-57 UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 225 2e-57 UniRef50_Q2IXE2 Response regulator receiver modulated diguanylat... 225 2e-57 UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 225 2e-57 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 225 2e-57 UniRef50_A0LBU1 Response regulator receiver modulated diguanylat... 225 2e-57 UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 225 2e-57 UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms R... 225 2e-57 >UniRef50_P31129 Uncharacterized protein ydeH n=55 Tax=Enterobacteriaceae RepID=YDEH_ECOLI Length = 296 Score = 436 bits (1122), Expect = e-121, Method: Composition-based stats. Identities = 296/296 (100%), Positives = 296/296 (100%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH Sbjct: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY Sbjct: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI Sbjct: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH Sbjct: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV 296 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV Sbjct: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV 296 >UniRef50_B1ELX2 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Enterobacteriaceae RepID=B1ELX2_9ESCH Length = 296 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 265/296 (89%), Positives = 284/296 (95%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 MIKKTTEIDAILL+LNKAIDAHYQWLV+MFHSVVARDASKPEITDNHS+GLCQFG+WI+H Sbjct: 1 MIKKTTEIDAILLDLNKAIDAHYQWLVNMFHSVVARDASKPEITDNHSHGLCQFGQWIEH 60 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 LGPLDNDELPYVRLM+SAHQHMH+CGRELMLAI+EN WQ+AHF FQEGLLSFTA LTDY Sbjct: 61 LGPLDNDELPYVRLMNSAHQHMHDCGRELMLAIIENRWQEAHFAKFQEGLLSFTATLTDY 120 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 KIYLLTIRSNMD+LTGLPGRRVLDESFD+QL NAEPL+LYLMLLDIDRFKLVNDTYGHL Sbjct: 121 KIYLLTIRSNMDILTGLPGRRVLDESFDYQLSNAEPLSLYLMLLDIDRFKLVNDTYGHLT 180 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GDVVLRTLAT LA+WTRDYETVYRYGGEEFIII+KA ND+EAC AGVRICQLVDNHAI H Sbjct: 181 GDVVLRTLATSLANWTRDYETVYRYGGEEFIIIIKAQNDDEACHAGVRICQLVDNHAIAH 240 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV 296 GHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI++Q+VI+RV Sbjct: 241 PGGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFINKQDVISRV 296 >UniRef50_A4W9G8 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638 RepID=A4W9G8_ENT38 Length = 298 Score = 304 bits (779), Expect = 2e-81, Method: Composition-based stats. Identities = 120/288 (41%), Positives = 181/288 (62%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 M K +IDA + +LN + DAH++WL+++ V +RD P++T + ++ C FG W++ Sbjct: 1 MNSKFKKIDATVRDLNHSTDAHFKWLINILRFVASRDVLLPDLTCDDAHNFCDFGHWLNT 60 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 D Y+ + H H+H REL+ AI + +A FD F+ LL+FTA+++ Y Sbjct: 61 QLQDDIAGRNYLLDIKDKHIHVHKMCRELIKAIEHDECNNAPFDDFETALLAFTASVSRY 120 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 K +LL +R++ D LTGLP RR+LDES+D + LYL+LLD+D FK +ND YGHLI Sbjct: 121 KAHLLQLRTSYDALTGLPLRRILDESYDSMNKALGDEGLYLLLLDVDHFKKINDNYGHLI 180 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VLR+LA L + R E+VYRYGGEEFII+++A +D EA A R+ ++++ Sbjct: 181 GDAVLRSLALNLENNIRRAESVYRYGGEEFIILLQAHSDREATEAAERLRRVIETSETVS 240 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + IT ++G++R E L V+ RAD A+Y+GKQ+GRN + I+ Sbjct: 241 GGHRVKITFSSGLTRVHRGETLREVLERADVALYKGKQSGRNCTILIN 288 >UniRef50_C9XU93 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XU93_CROTZ Length = 301 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 106/281 (37%), Positives = 153/281 (54%) Query: 7 EIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDN 66 +ID L LN A+ HY+W V+ + S+ C+F +W+ + Sbjct: 11 QIDLSLKELNYAVKLHYEWTGKFLELVLLGNEPDNTFMHPQSHLYCRFCQWMTAHQNIAF 70 Query: 67 DELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLT 126 L + + + H+ MH+ R L+ AI N A A+ E F A++ DY+ L++ Sbjct: 71 RYLHFAKAISETHKAMHDKARYLINAIASNQVDSAALYAYHEAQQQFVASIDDYRQQLIS 130 Query: 127 IRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 +R+ D LTGLP R++L E F+ +A L+L+++DIDRFK VNDTYGH GD VLR Sbjct: 131 LRNRHDTLTGLPLRQLLYEDFEFLHAHAREQTLWLLIIDIDRFKKVNDTYGHNAGDDVLR 190 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 +A + R E VYR+GGEEFI ++++ EEA AGVR+C+ +T +N Sbjct: 191 EVAQRFKNEARCCEQVYRFGGEEFIALLESHTQEEAREAGVRLCRCPGQLPLTLDGETLN 250 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 +TVT G++ E L IGRAD AMY GK GRNRC+ Sbjct: 251 VTVTGGLTCVRRNETLHEAIGRADDAMYFGKNNGRNRCILA 291 >UniRef50_Q0EXC9 Signaling protein with a GGDEF domain n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC9_9PROT Length = 308 Score = 282 bits (723), Expect = 9e-75, Method: Composition-based stats. Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 4/283 (1%) Query: 6 TEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLD 65 E+D IL+ +++AID H QW + +++ + + +Y C+FG+W Sbjct: 16 KELDGILIQIDQAIDNHDQWYAQLERTLICKLPPDQRDLEKDAYKQCRFGQWYYQYSSPA 75 Query: 66 NDELPYVRLMDSAHQHMHNCGRELM-LAIVENHWQDAH-FDAFQEGLLSFTAALTDYKIY 123 P ++ HQ +H L+ +++ E D H FD F L L K Sbjct: 76 LRSHPTFASIEHEHQLLHERVSGLLQVSMAEAKPIDVHVFDEFANTLQRMRLLLFSLKHE 135 Query: 124 LLTIRSNMDVLTGLPGRRVLDESF--DHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIG 181 + +N+D LTG R + +L + + +LD+D FK VND YGH +G Sbjct: 136 IEGDLNNLDPLTGAYNRFGMMAFLHEQQELVARGVNSCSIAMLDLDFFKQVNDQYGHKMG 195 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D VL ++A+ L R Y+ ++RYGGEEF+ + E A R+ + V++ I Sbjct: 196 DHVLTSIASTLLKGLRPYDKLFRYGGEEFVAVFPNTAVESALLVAERVRKYVEDTIIEID 255 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + + ITV+ G++ +++ + +AD AMY KQ GRN+ Sbjct: 256 KLPVRITVSVGIAAIDANTSVEISVEQADIAMYTAKQNGRNQV 298 >UniRef50_C8Q5F4 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8Q5F4_9ENTR Length = 299 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 100/294 (34%), Positives = 150/294 (51%), Gaps = 2/294 (0%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 M + +I+ + +LN AI HY+W + + + D HS+G C FG+WID Sbjct: 1 MQRTIYDIEVDIASLNHAIKNHYEWSNRLLEISLFGGNFDKSLADPHSHGYCDFGKWIDA 60 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 + N + + +H MH+ RE++ AI N + + + + SF AL Y Sbjct: 61 MLIKYNFNDNDLLRISDSHIKMHDAVREIITAINANSFTHPQLEEYFQKQKSFLDALDGY 120 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGH 178 K LL RS+ D LT LP R L F+ + LY+++LD+D FK VND YGH Sbjct: 121 KTRLLASRSSYDALTELPMRSKLISDFERLQQRCALTEHTLYVIILDVDHFKTVNDQYGH 180 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 GD VL+ LA L R E YRYGGEEF+I+V+A + + R+ + + N Sbjct: 181 NGGDTVLKGLAQLLLETMRKCEKCYRYGGEEFVILVEAPCLADIKKLVERLMKRMRNETF 240 Query: 239 THSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNV 292 ++ IN+T T GV+ + L+ I AD+AMY GKQ GR+ C++ + + Sbjct: 241 SYEHHIINVTATFGVAPVRDDGSLERSIELADKAMYHGKQHGRDICIYNHNEEM 294 >UniRef50_A4U5Q6 GGDEF domain protein n=2 Tax=Magnetospirillum RepID=A4U5Q6_9PROT Length = 288 Score = 279 bits (715), Expect = 7e-74, Method: Composition-based stats. Identities = 82/287 (28%), Positives = 130/287 (45%), Gaps = 6/287 (2%) Query: 4 KTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGP 63 K E+ A L + + H+ WL + +V+ R + + C F +W + G Sbjct: 2 KPEEVFASLTAFQQGLAGHFDWLHRWYQAVLNR--QDGVKFPDPAACACPFDQWHKNAGG 59 Query: 64 LDNDELPYVRLMDSAHQHMHNCGRELM-LAIVENHWQDAHFDAFQEGLLSFTAALTDYKI 122 + P + + H +H+ +L A + ++ +LSF A + Sbjct: 60 TPFADFPDFAQLAAEHDEVHDKAAQLSGRAQAGLTVTTSDYETLMMSVLSFGATAQSLER 119 Query: 123 YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLI 180 + + +D LTGL R+ + + A + L L L L DID FK +ND +GH Sbjct: 120 EVWKALATVDPLTGLSNRQSMRTHLMGERDRAIRQKLPLSLALADIDHFKKINDGFGHSQ 179 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VLR +A L + R Y+ VYRYGGEEF++ + N E RI + +T Sbjct: 180 GDKVLRAVAAVLKATVRPYDVVYRYGGEEFLLCLPGTNAENGALVLERIRAAIAALELTD 239 Query: 241 SEG-HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 G I +T T G++ + +D I ADRA+Y+GK GRN+ + Sbjct: 240 DRGTPIPVTATFGIAEINADLSVDDAIELADRALYDGKLGGRNKVVI 286 >UniRef50_A6VSB0 Diguanylate cyclase n=2 Tax=Gammaproteobacteria RepID=A6VSB0_MARMS Length = 296 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 5/287 (1%) Query: 4 KTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGP 63 ++ I+ L++AI H QW + ++ R + ++ C FG+W + Sbjct: 5 TNQQLQLIIAQLDQAIFNHDQWYKHILRILILRIPPEKADIAPEAHRHCHFGQWYESSQA 64 Query: 64 LDNDELPYVRLMDSAHQHMHNCGRELMLAIVENH-WQDAHFDAFQEGLLSFTAALTDYKI 122 E P + AH+ MH + L+ I + +D+F + + A + Sbjct: 65 FFIRENPAFISLGDAHKKMHISAQNLLQKISDGLLILSIDWDSFDKDIDKMRLAFQSLRH 124 Query: 123 YLLTIRSNMDVLTGLPGRRVLDESF--DHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 I N D LT R + + L N L++ D+D FK VNDTYGH+ Sbjct: 125 EFTVIAKNRDPLTEAQTRDGMLAEISDQNALVQRGQQNCALVMFDLDHFKQVNDTYGHIA 184 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD+VL + + + R Y+ +YRYGGEEFII + +A R+ + + I Sbjct: 185 GDLVLVSTVQRIKTLLRPYDRIYRYGGEEFIICMPRTTLAQAHMVAERMREAIAEQNIQF 244 Query: 241 SEG--HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + +T + GV+ ++ I D+AMYE K+ GRNR + Sbjct: 245 DNSRESLRVTASFGVTILTQLRSVEESIDYVDKAMYEAKRAGRNRVV 291 >UniRef50_C6BU46 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BU46_DESAD Length = 490 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 88/289 (30%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 6 TEIDA-ILLNLNKAIDAHYQWLVSMFHSVVA---RDASKPEITDNHSYGLCQFGRWIDHL 61 IDA I +N +A + +W+ M +VVA + S +++ G Q I Sbjct: 201 KHIDAEIFINPGQAENVQSEWVELMIENVVALSGMEVSSYNMSETVPVGSNQM---IYSP 257 Query: 62 GPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYK 121 G LP V + + C R + LA + +A + L+ + A+ K Sbjct: 258 GAGRILALPLVARGEKFGCLVMLCERNIRLAKDQVSSLNAAVNHLS---LALSNAIMFNK 314 Query: 122 IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHL 179 I R+N D LT + RR DE + + + LN L L+++D+D FK VNDTYGH+ Sbjct: 315 I---KTRANRDGLTRVYNRRSFDERLVEEFKRHQRLNTELSLLMVDLDYFKAVNDTYGHM 371 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 GD+VL +A R + + RYGGEEF+I++ +++A RI +++ A+T Sbjct: 372 AGDMVLEKVARMFEKTFRSTDFIARYGGEEFVILLPHTREDQAEMLAERIRAKIESCAMT 431 Query: 240 HSEGHINITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCMF 286 + + NIT + GVS P E ++ +AD A+Y+ K GRNR + Sbjct: 432 YQDKSFNITASIGVSSVRPGSLEKDTEIVRKADEALYDAKMQGRNRVVV 480 >UniRef50_Q2BRK2 Signaling protein with a GGDEF domain n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRK2_9GAMM Length = 330 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 5/286 (1%) Query: 14 NLNKAIDAHYQWLVSMFHSVVARDASKPE-ITDNHSYGLCQFGRWIDHLGPLDNDELPYV 72 ++ ++ H+ WL + ++ R K + C FG W+ ++ + + P Sbjct: 20 DIKSSLAEHHIWLQRINLAIATRTPIKEHSFIAEDGHRHCHFGLWLANIMAEEEFDSPIF 79 Query: 73 RLMDSAHQHMHNCGRELMLAIVENHWQDAHFDA-FQEGLLSFTAALTDYKIYLLTIRSNM 131 ++ H +H G EL+ ++ H D A F + F A+ + + + Sbjct: 80 DQINQLHVKLHLKGSELIYSLDLGHPLDESLYASFLDTQRQFFNAVLELLEFSVISTHQF 139 Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLN---LYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 D T L RR + H+ + E + + DIDRFK ND YGH +GD VL + Sbjct: 140 DPTTKLMNRRSIHSILAHEKQRMEKTKDTVCAIAMADIDRFKAFNDRYGHDLGDKVLEHV 199 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 A+ S R Y++V R+GGEEF+ ++ ++A R+ + + I G + +T Sbjct: 200 ASVFNSAIRRYDSVARFGGEEFLFVLPDMTIKDATNTIERVRKKLSTSPIESEFGPLAVT 259 Query: 249 VTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVIN 294 + G+++ P + + RAD A+YE K GRN C+ +D ++ Sbjct: 260 ASFGITQLCPHCNTEGSLKRADVALYEAKARGRNLCVSVDASKLLQ 305 >UniRef50_A8UZ69 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZ69_9AQUI Length = 419 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 136/280 (48%), Gaps = 8/280 (2%) Query: 12 LLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPY 71 + L+ + H+ WL + + + SKP I N + +C+FG+ I++ L Y Sbjct: 143 VSILSGYVKDHFIWLNKLLEDI-KKLRSKPSIELNPN--ICEFGKKINNGDLDSILTLKY 199 Query: 72 VRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLL--TIRS 129 ++ H +H E+ I + +++ + + T ++ + + Sbjct: 200 KDIVKRIHDSIHQSANEIYFFIEKRAFKNLLIEYINLFKNTSRLVSTIALVHSVSSEAEA 259 Query: 130 NMDVLTGLPGRRVLDESFDHQ--LRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 N+D LT L RR ++ +Q L + + L D+D FK +NDTYGHL+GD VL+ Sbjct: 260 NIDPLTHLFNRRAMEIILTNQYTLSKITGNDFVIGLADMDDFKKINDTYGHLVGDCVLKE 319 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 +A + S R + V+RYGGEEF+I++ EA + ++ Q + I I+I Sbjct: 320 VAVRIKSVLRKSDFVFRYGGEEFLILLPYTTKREALKVLEKVRQSIIAEPIKCKNNMIDI 379 Query: 248 TVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCMF 286 T++ G + E L+ +I AD+ +Y+ K+TG+N+ + Sbjct: 380 TISIGAASLTENPEYLEKLIELADKRLYKAKRTGKNKVVV 419 >UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium RepID=B2V5Y5_SULSY Length = 411 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 130/290 (44%), Gaps = 22/290 (7%) Query: 6 TEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLD 65 +I +L N AH + +S++ I N S+ C FG W+ G Sbjct: 135 KDIHLLLANP---FKAHINYFKDFLNSIL-----DGGIFSNISHQSCAFGIWLKEKGKEY 186 Query: 66 NDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTA-------ALT 118 DE ++ + H+ HN ++ I E++ ++ F +L+ Sbjct: 187 IDEEHILKDLKHLHKDFHN-----LIEIAESYKKNKKFKDLYFMILNIQNIMIWIGNEFL 241 Query: 119 DYKIYLLTIRSNMDVLTGLPGRRVLDESFDH--QLRNAEPLNLYLMLLDIDRFKLVNDTY 176 + + ++D LTG RR + ++ + L + D+D FK +NDT+ Sbjct: 242 YLNTKFIKLEMSIDPLTGAFNRRGFEIIIQKLLEISQITDAPITLAMADLDYFKKINDTF 301 Query: 177 GHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNH 236 GHL GD L+ + R + V+R GGEEF+I++ ++A RI + ++ + Sbjct: 302 GHLAGDEALKHFVNIIKRNLRKSDYVFRIGGEEFLILLPNTELKDAVEIVERIRKDLEEN 361 Query: 237 AITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 ++ + I IT + G++ E+ ++ +I +AD +Y+ K++GRN+ + Sbjct: 362 SLHYDGKEIKITASFGLAEVDKEKYINEIIKKADEKLYKAKESGRNKVVV 411 >UniRef50_C0QQG6 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QQG6_PERMH Length = 430 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 142/280 (50%), Gaps = 12/280 (4%) Query: 14 NLNKAIDAHYQWLVSMFHSVV-ARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYV 72 L + H WL + + R S E+ N C+F R ++ L N Sbjct: 156 ELRFYVKEHLVWLNKIIEDIKKLRKESSVELDVNK----CKFSRLLEDETVL-NISKKKF 210 Query: 73 RLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQ-EGLLSFTAALTDYKIYLLTIR-SN 130 ++ H+ +H ++ +I E ++ + FD + L + +L KI + ++ +N Sbjct: 211 NILKDIHEKIHKTAIDIYYSIEERNFINLLFDYINLQKLSAQFLSLLTVKIAVRSVEDAN 270 Query: 131 MDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 +D LTG+ RR ++ ++Q + ++ + + LLDID FK +ND+YGHL+GD V++ + Sbjct: 271 VDPLTGVLNRRPMEFILNNQYQISKISNRPVSIALLDIDDFKKINDSYGHLVGDCVIKQV 330 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 ++ L R + ++R+GGEEF+I + +A + ++ + ++ I + I +T Sbjct: 331 SSILQKSLRKSDLIFRFGGEEFLIFMPFTEKRDAFKVMEKLRKKIEEKDIICGKNTIKVT 390 Query: 249 VTAGV--SRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 V+ GV + P E ++ +I RAD+ M K+TG+N+ + Sbjct: 391 VSVGVEGATLHPNETVNDIIERADKKMLRAKRTGKNKVVI 430 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 5/197 (2%) Query: 93 IVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLR 152 I+++ + + +L F+ + + S D LTGL + +E +++ Sbjct: 269 ILKSFYTNITLSFLLAVILGFSVYIFLKDLEKFRYLSETDRLTGLYNKGKFNEVLQREIQ 328 Query: 153 NAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEF 210 A+ L L++ DID FK +NDTYGH +GD VL+ LA + R + R+GGEEF Sbjct: 329 RAKRYKRPLSLIIFDIDHFKKINDTYGHKVGDEVLKALAKLIKKNIRKTDFAARWGGEEF 388 Query: 211 IIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRAD 270 +I+ N E A + ++ Q V+ + +T++ GV++ P+E + I RAD Sbjct: 389 VILAPETNVEGAKKLAEKLRQAVETYKFPTVG---KVTISLGVAQLEPDEKPEDFIVRAD 445 Query: 271 RAMYEGKQTGRNRCMFI 287 A+Y+ K+ GRNR Sbjct: 446 MALYKAKEGGRNRVEIA 462 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 63/176 (35%), Positives = 94/176 (53%), Gaps = 4/176 (2%) Query: 114 TAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRF 169 +TD+ IY L + +D LTG+ RR LD +L + L +M+LDID F Sbjct: 122 VQDVTDFVIYEHKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIMMLDIDHF 181 Query: 170 KLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRI 229 K +NDT+GH+ GD LR ++ L R + + RYGGEEF I+ + E+A R Sbjct: 182 KEINDTHGHICGDYTLRKISELLLELVRTSDILGRYGGEEFCCILPETSFEQALVLAERC 241 Query: 230 CQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 V + ++ +TV+ GV+ ++ LD +I RAD A+Y+ K+TGRNR Sbjct: 242 RTQVAASQFSCTDHQSRVTVSIGVTDLHRDDTLDSIIKRADDALYQAKRTGRNRVC 297 >UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZCI9_GLUDA Length = 472 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 12/271 (4%) Query: 25 WLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHN 84 W ++ S A PE +FG W+ + L + L+ + N Sbjct: 193 WSYNVLRS--LYVAKTPEDLQTMGLARSEFGLWVTYKVGLLFEGTDISALLTGQIAKVDN 250 Query: 85 CGRELMLAIVENHWQDAHFDAFQEGLLS-FTAALTDYKIYLLTIRSN---MDVLTGLPGR 140 EL+ AI+E+ + L + T L+ ++ RS+ D LT + R Sbjct: 251 ---ELLPAILEDMAAERDISPALAALHAGVTEILSSLEVLFHASRSSNDVEDPLTRVLNR 307 Query: 141 RVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRD 198 R L ++LR A + ++ LDID FK +NDT+GH GD VL+ +A L +R Sbjct: 308 RFLPSIISYELRVAHQTGRPMSVLFLDIDHFKHINDTFGHAAGDSVLQAIARVLEEASRL 367 Query: 199 YETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN-ITVTAGVSRAF 257 + ++RYGGEEF++++ + E+ R+ Q ++N I +G+++ ITV+ G ++ Sbjct: 368 SDVIFRYGGEEFLVLMGDTDTEQMLIGAERLRQKIENTPIRLPDGNLHQITVSIGAAQYA 427 Query: 258 PEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + ++ AD A+Y K+ GRNR D Sbjct: 428 GHPDYEELLRAADAALYRAKRNGRNRIEVAD 458 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 64/181 (35%), Positives = 98/181 (54%), Gaps = 3/181 (1%) Query: 109 GLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDI 166 G+++ T + + L + D LTGL RR E+ +H+++ L L+ +D+ Sbjct: 531 GIITDTTEHREAQ-ERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDV 589 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAG 226 DRFK VNDT+GH +GD VLR LA + RD +TV R GGEEF +++ EEA Sbjct: 590 DRFKRVNDTWGHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVA 649 Query: 227 VRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 R+ V+ + + G + +T++ GVS + P + D ++ ADRA+Y K GRNR Sbjct: 650 ERLRAGVEAAPLLTTAGPLTVTLSLGVSASPPCDGADTLLREADRALYRAKAGGRNRVER 709 Query: 287 I 287 Sbjct: 710 A 710 >UniRef50_Q47FN5 Response regulator receiver modulated diguanylate cyclase n=3 Tax=Betaproteobacteria RepID=Q47FN5_DECAR Length = 313 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 79/254 (31%), Positives = 120/254 (47%), Gaps = 11/254 (4%) Query: 43 ITDNHSYGLCQFGRW--IDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQD 100 + H + + G W I L LD+D + ++H E++L Q Sbjct: 61 VVAQHIRAMEKPGDWAPIIFLSSLDDDANIEKGIAAGGDDYLHKPISEIVLGAKIRAMQR 120 Query: 101 AHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN-- 158 + LL+ T L L+ I S+ D LTG+ RR DE+ + R A + Sbjct: 121 IVL--MRASLLAVTRKLDAANQELIRI-SSTDSLTGVANRRYFDEAMSIEWRRARRHSNS 177 Query: 159 LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAA 217 + L++ DID FKL NDTYGH GD LR +A ++ T R +TV RYGGE+F +I+ Sbjct: 178 IALLMCDIDYFKLYNDTYGHQAGDECLRKIAAAISRHTERPSDTVARYGGEKFAVILPET 237 Query: 218 NDEEACRAGVRICQLVDNHAITHSEGHI-NITVTAGVSRAFP--EEPLDVVIGRADRAMY 274 + A +I Q ITH+ + ++ G++ A P + P D +I AD+A+Y Sbjct: 238 SIGGALMVAEKIRQATKELNITHASSPTGQVGLSIGIASAAPGFDNPPDDLILAADKALY 297 Query: 275 EGKQTGRNRCMFID 288 K+ GR+R D Sbjct: 298 RAKKEGRDRVYRAD 311 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 5/201 (2%) Query: 88 ELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESF 147 L LA+ + ++ + + + L ++ D LTGL R +E Sbjct: 524 TLQLALTALFYFFGRERGVRDRVQQLLRSELQERAAALARQATTDPLTGLHNRLRFNEGL 583 Query: 148 DHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRY 205 +L L L++ D+D FK VND YGH GD VL L+ A+ R + + R+ Sbjct: 584 AQELARVRRTGQPLSLVMFDVDHFKEVNDRYGHPTGDQVLIRLSQTAAAQLRQTDLLARW 643 Query: 206 GGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVV 265 GGEEF I++ A+ A + +LV + ++T + GV+ P+E D + Sbjct: 644 GGEEFAILLVDADLHAAVEVAENLRRLVARTPF---DQIGSVTASFGVAECRPDESADSL 700 Query: 266 IGRADRAMYEGKQTGRNRCMF 286 + RAD A+Y K GRNR Sbjct: 701 LERADAALYRAKSNGRNRVEI 721 >UniRef50_C0QSI7 Diguanylate cyclase with GAF sensor n=1 Tax=Persephonella marina EX-H1 RepID=C0QSI7_PERMH Length = 423 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 130/277 (46%), Gaps = 12/277 (4%) Query: 17 KAIDAHYQWLVSMFHSVV-ARDASKPEITDNHSYGLCQFGRWID-HLGPLDNDELPYVRL 74 K I H W + + R+ EI +N C+ +D + ++ + Sbjct: 150 KFIKEHLIWFFDLTSDIQNLREKPSIEIDEN----RCKIKELLDPENVKVLLEDSKDIEQ 205 Query: 75 MDSAHQHMHNCGRELMLAIVENHWQD--AHFDAFQEGLLSFTAALTDYKIYLLTIRSNMD 132 + H +H +E+ +I + + + + + +LS + T +S D Sbjct: 206 LRFVHTTIHENAKEIYASIKKKEYLKLLEAYISLVKNVLSMISIFTVAIARENIEKSRRD 265 Query: 133 VLTGLPGRRVLDESFDH--QLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLAT 190 LT L R V+D ++ + +LD+D FK +NDTYGH++GD VL+ +A Sbjct: 266 PLTDLLNRTVMDMIIARTIEISKISETPFSIAMLDVDNFKRINDTYGHIVGDCVLKEIAK 325 Query: 191 YLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVT 250 + R + V+RYGGEEF++++ + + + A R R + ++ +I IN+T++ Sbjct: 326 IIKKSLRKSDFVFRYGGEEFLVLLPSTDSKHAYRIMERTRKNIEKASIKCDSHKINVTIS 385 Query: 251 AGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNRCM 285 G+ +P+E L+ +I +AD+ +Y K+ G+N + Sbjct: 386 IGLITVYPDETLNIKQIIQKADQNLYTAKKKGKNLVI 422 >UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVW7_DESBD Length = 572 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 72/245 (29%), Positives = 122/245 (49%), Gaps = 14/245 (5%) Query: 53 QFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAH----FDAFQE 108 F ++ H+ P +DE + ++A H EL + V+ + FD ++ Sbjct: 321 DFNLFMHHIHP--DDEPAFRENFEAAQATGHEFTTELRIRTVQGEERHVSLVCGFDLLED 378 Query: 109 G----LLSFTAALTDYKIYLLTIR--SNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLY 160 G L A +T+ ++ L + +N D LTGLP RR E ++ + +L Sbjct: 379 GSMFRLHGAMADVTERRLAELRLERLANTDELTGLPNRRHFLECVRAEMTRSRRFGKSLC 438 Query: 161 LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDE 220 + ++DID FK VNDT+GH +GD+ LR +A + R + V R GGEEF ++ A Sbjct: 439 VAMVDIDDFKKVNDTHGHGVGDLALRHVAQTINGLRRAVDVVGRLGGEEFCVLFPEAGLA 498 Query: 221 EACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTG 280 A R+ + + + H + + +TV+ G++ +E LD ++ R+D A+YE K+TG Sbjct: 499 AGITAAERVRKALAEAVLEHGDLRLRLTVSIGLAEYSGDESLDGLLRRSDEALYEAKRTG 558 Query: 281 RNRCM 285 +NR Sbjct: 559 KNRVC 563 >UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW02_9GAMM Length = 595 Score = 243 bits (620), Expect = 7e-63, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 94/196 (47%), Gaps = 6/196 (3%) Query: 97 HWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP 156 Q + +E + T+AL + L SN D LTGL RR LDE +++ Sbjct: 391 RVQRESVELLEERVKERTSALREA-NEKLEKLSNTDSLTGLNNRRSLDELLAMEVKRTCR 449 Query: 157 L--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIII 213 L M++DIDRFK NDT+GH +GD L+ +A +AS R + V RYGGEEF ++ Sbjct: 450 TGAPLSAMMMDIDRFKAFNDTHGHQVGDACLKAVAGVIASTAQRPSDVVGRYGGEEFCVL 509 Query: 214 VKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSR--AFPEEPLDVVIGRADR 271 + + A RI V+N T S + +T++ GVS + ++ AD Sbjct: 510 LPDTPLDGAQIIAERIRAAVENLDFTVSGQRVPVTISIGVSELTYCASDSGKALVEAADE 569 Query: 272 AMYEGKQTGRNRCMFI 287 A+Y K GRN Sbjct: 570 ALYSAKSAGRNCVRLA 585 >UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX81_9GAMM Length = 384 Score = 242 bits (619), Expect = 9e-63, Method: Composition-based stats. Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 8/225 (3%) Query: 65 DNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL 124 + +PY ++++ +H+ L+L + + + + S + Sbjct: 162 ALEVIPYASVIETNGTPLHHNATWLILLLGLS----TPYIGLLVAMNSSAIRRWRQRESE 217 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN---LYLMLLDIDRFKLVNDTYGHLIG 181 + S D LT + RR L E + ++ E L L+++D+D FK +ND +GHL G Sbjct: 218 VRQLSTTDPLTQVANRRHLLERLNLEISRCERSGHSELSLLMMDLDHFKSINDEHGHLFG 277 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D LR A L +R+ + V RYGGEEF +++ + A + R Q ++ I Sbjct: 278 DEALRVTARVLREQSRNTDLVGRYGGEEFCLLLPDTGPQGALQIAERCRQALEQADIDRE 337 Query: 242 EGH-INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 +G ++IT + G++ + + ++ RAD A+Y+ K+ GRNR + Sbjct: 338 DGEVLHITTSIGLATYQMGDTNESLLHRADEALYQAKEQGRNRIV 382 >UniRef50_A1U2H0 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U2H0_MARAV Length = 630 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 68/271 (25%), Positives = 115/271 (42%), Gaps = 11/271 (4%) Query: 25 WLVSMFHSVVARDA-----SKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAH 79 W+ +F +V + + +T+N + G + + D + + Sbjct: 347 WVFMLFGGIVLALSKFTMLPRNLLTENATQVGSALGVILLSIALADRLNREKKKSFAAQQ 406 Query: 80 QHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPG 139 + + + + Q +E + T L LL + + D LTGL Sbjct: 407 KLLREERKARLAQEKSLRIQQEANALLEERVQERTRDLEILNEQLLELSA-TDPLTGLKN 465 Query: 140 RRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT- 196 R D+ F + +A L L+++DID FK NDTYGHL+GD L+ +A + Sbjct: 466 RGHFDKKFQSDVVHAYRFEETLSLLIVDIDHFKGFNDTYGHLVGDDCLKMVADCIKQHVT 525 Query: 197 RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA 256 R + RYGGEEF++++ + ACR I + + A S+ +++TV+ GV Sbjct: 526 RPQDLAARYGGEEFVVLLPDTPEAGACRVAELIREDIQKMAFRVSDQVLHLTVSIGVCSC 585 Query: 257 FPE--EPLDVVIGRADRAMYEGKQTGRNRCM 285 P + + AD A+Y K GRNR + Sbjct: 586 APSQADATKALFACADGALYRAKAEGRNRVV 616 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 60/179 (33%), Positives = 89/179 (49%), Gaps = 3/179 (1%) Query: 112 SFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRF 169 F L + + L+ + +D LTGL RR E + +L + +LLDIDRF Sbjct: 275 RFLKELREAQEKLVE-MATIDSLTGLLNRRAGLERVEEELSRHQRSERAFACLLLDIDRF 333 Query: 170 KLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRI 229 K +NDTYGH GD VL L R ++ V RYGGEEF++++ + A +I Sbjct: 334 KKINDTYGHQAGDAVLSEFGATLRRHVRKHDIVCRYGGEEFLLLLPDTSPSAARTTAEKI 393 Query: 230 CQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + I + I +T + G+S +E +I RAD A+YE K +GRNR + + Sbjct: 394 RAVTAATPIMFAGRQIAVTTSIGISMMQGDETAKAMIARADAALYEAKNSGRNRVVCAE 452 >UniRef50_C9RM68 Diguanylate cyclase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM68_FIBSS Length = 566 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 16/302 (5%) Query: 5 TTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDN-HSYGLCQ-FGRWIDHL- 61 T ++ I L IDA + + ++ + +C+ IDH+ Sbjct: 262 TYDLGLIALQPKTEIDAMVSSVHHVSQIILFSSIIAILLVSLWQILIVCKPLNNLIDHIS 321 Query: 62 ----GPLDNDELPYVRLMDSAHQH---MHNCGRELMLAIVENHWQDAHFDAFQEGLLSFT 114 G LD +E D + + + I E +AH D ++ + T Sbjct: 322 QITEGKLDIEEFKARSSQDEIGRLAKVFNQMHATIKRQIQE---LNAHRDMLEKEVKERT 378 Query: 115 AALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLV 172 L + L + S D LT LP RR + + + ++ A ++ +DID FK V Sbjct: 379 YEL-EQANKKLDLISRTDELTQLPNRRDMHRTIEKEVDRANRFKKAFSIIFIDIDHFKDV 437 Query: 173 NDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQL 232 NDTYGH GD VL+++A+ + S R Y+ + RYGGEEF+ ++ ++A R + Sbjct: 438 NDTYGHAAGDAVLKSVASTIRSLLRKYDVLARYGGEEFLTLLPETELKDAAHVAERFRKQ 497 Query: 233 VDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNV 292 ++N I I +T+T GV++ + I AD+A+YEGK+ GRNR + + Sbjct: 498 IENQTIFFGGQEIKVTITLGVAQFDSGLGAERCIQLADKALYEGKEHGRNRVILWTDDQA 557 Query: 293 IN 294 + Sbjct: 558 VE 559 >UniRef50_Q1ZGY5 GGDEF domain protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGY5_9GAMM Length = 493 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 19/263 (7%) Query: 32 SVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELML 91 SV + K + ++S L Q + L N+ Y++ MD +ML Sbjct: 232 SVFNKKNQKLKDLQDNSSALYQKTENATDINTLKNEIFTYIKSMD------------VML 279 Query: 92 AIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIR-----SNMDVLTGLPGRRVLDES 146 E+ +D + FQ+ + ++ + Y T++ +++D LT +P R E Sbjct: 280 KEQESKHEDDMQEKFQDMIRQIKELKSETQNYQKTLKQQSELAHLDFLTKIPNREAWSER 339 Query: 147 FDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYR 204 + + L + ++D+D FK +ND +GHL GD V+ +A L R+ + + R Sbjct: 340 LTFEFSRYQRYQNPLKIAIIDMDHFKRINDQFGHLAGDKVINVVAQTLKKSLRNTDFIAR 399 Query: 205 YGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDV 264 YGGEEF I++ +E+A ++C + + + +I+IT++ G + + +D Sbjct: 400 YGGEEFAILLPEITNEQAVDVLQKLCAKIASIPFKFKKDNISITISIGCASFDKGDNIDS 459 Query: 265 VIGRADRAMYEGKQTGRNRCMFI 287 RAD A+Y+ K GRN+ +F Sbjct: 460 AFERADNALYKAKNGGRNQVVFF 482 >UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9C4_9DELT Length = 498 Score = 240 bits (612), Expect = 6e-62, Method: Composition-based stats. Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 8/227 (3%) Query: 75 MDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIY-LLTIRSNMDV 133 + +AH+ G ++L + + F+ + AL + I+ + +R++ D Sbjct: 273 LTAAHETF---GCLVLLCEPDYRLGRDQVETFRSAVNHLGLALRNALIFKEVKLRADRDG 329 Query: 134 LTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATY 191 LT + R DE ++++ N L L+++D+D FK VNDTYGH GD+VLR + Sbjct: 330 LTRIYNRHSFDERLIYEIKRRRRYNHDLSLLMVDLDHFKQVNDTYGHKAGDMVLRKVGEI 389 Query: 192 LASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTA 251 L R + RYGGEEF++++ ++E A + RI + + ++T + Sbjct: 390 LTETFRTTDLAARYGGEEFVVLLPHTSEEAAWKLAERIRESIQGCVFRFDGHEFSVTASI 449 Query: 252 GVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV 296 GV+ D ++ +AD+A+Y+ K GRN + + V Sbjct: 450 GVASVEAGALTRDDDLLIKADKALYKAKNNGRNMVVISRPEGAAQAV 496 >UniRef50_Q4KKJ4 Diguanylate cyclase, putative n=5 Tax=Pseudomonas fluorescens RepID=Q4KKJ4_PSEF5 Length = 727 Score = 239 bits (610), Expect = 9e-62, Method: Composition-based stats. Identities = 76/284 (26%), Positives = 120/284 (42%), Gaps = 18/284 (6%) Query: 6 TEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLD 65 ++A NL A D H + A D+ E D + + D L+ Sbjct: 456 ERLEAFQSNLQAASDGHADSS----SAARAMDSQIREQVDGLQSSVQEAADLDDLKQVLE 511 Query: 66 NDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLL 125 + + MD + RE+ A + E + S Y+ +L Sbjct: 512 SHLEGLLGTMDHHQKQRDEREREVA----------ARLQSLAERVSSMEQEAQGYREHLE 561 Query: 126 TIR--SNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIG 181 R + +D LTGLP R E +H++ + +L L +LD+D FK +ND YGHL G Sbjct: 562 EQRQKALIDPLTGLPNRAAWSERLEHEVGQWQQHGNSLLLAMLDLDHFKRINDNYGHLAG 621 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D VL+ +A L R + + R+GGEEF++++ R + ++ Sbjct: 622 DKVLKIIANVLRKRLRGSDFIARFGGEEFVLLLPNTPWPVGVRIVEALRAAIEACPFHFK 681 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + ITV+ G+S + D+VI RAD+A+Y K GRNR Sbjct: 682 GEPVTITVSVGLSAFKAGDRSDLVIKRADQALYRAKDAGRNRVE 725 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 239 bits (610), Expect = 9e-62, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 16/260 (6%) Query: 43 ITDNHSYGLCQFGRWIDHLGPLDNDELPYV---------RLMDSAHQHMHNCGRELMLAI 93 + N + +F W H P Q + G L + Sbjct: 331 LNANLPEDIERFHHWAAHTHPDSITNTMMAIQAMKDNNSDRYQIEQQKLCGDGTYKWL-L 389 Query: 94 VENHWQDAHFDAFQEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQL 151 D ++ + +T+ K L ++ +D LTG+ RR E + ++ Sbjct: 390 NRGMVISRSSDGKPLRMIGTSTDITERKQLEEELKRQARIDFLTGVSNRRYFMEQAEQEI 449 Query: 152 RNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEE 209 + L +LDID FK VNDTYGH GD+VL+ +A+ R+ + + R GGEE Sbjct: 450 QRTSRYDTPLSFFMLDIDLFKQVNDTYGHKSGDIVLKRMASVCRETLREIDIIGRVGGEE 509 Query: 210 FIIIVKAANDEEACRAGVRICQLVDNHAITHSEG-HINITVTAGVSR-AFPEEPLDVVIG 267 F I++ + +A R+ ++ + + G I TV+ GV+ ++ +D+++ Sbjct: 510 FAILLPETDKAQAAEVAERLRSVLADEKVPTEAGAPIQFTVSIGVASRVSSQDNIDMLLN 569 Query: 268 RADRAMYEGKQTGRNRCMFI 287 AD A+Y+ K+ GRNR Sbjct: 570 LADEALYQAKKYGRNRVYIA 589 >UniRef50_C1DXV0 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DXV0_SULAA Length = 437 Score = 239 bits (610), Expect = 9e-62, Method: Composition-based stats. Identities = 74/286 (25%), Positives = 131/286 (45%), Gaps = 21/286 (7%) Query: 12 LLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPY 71 +L+L +A H + +V D +++ Y +C+F +W++ G DE Y Sbjct: 153 VLSLQEAAKIHIKNRNKFLKAVA--DGDTDVLSNLPDYKICEFTKWLEEHGQKYIDEKSY 210 Query: 72 VRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIR--- 128 + H H E I + ++ ++ LL K+ + R Sbjct: 211 EEVW-----HFHKLFHEKFEKIKHIYSKNKENNSLAVYLLLKDIENASLKLLFILNRISL 265 Query: 129 ------SNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLI 180 + D LTG R +LD + ++ + ++++D+D FK +ND YGHL+ Sbjct: 266 DNVSKIALKDSLTGFFNRHMLDVLLSKETSRSKRHGYKISILMMDLDNFKNINDIYGHLV 325 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VL + + + R+ + +RYGGEEF+I++ ++E A RI + V+++ Sbjct: 326 GDEVLMHFSRIVKNNLRESDYPFRYGGEEFLILLPHTDEEGALVVAERIRKSVESYKFPV 385 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 E ITV+ GV + + I ADR +Y K+TG+NRC++ Sbjct: 386 IE---RITVSCGVREIKNLDNPYIDIEEADRYLYIAKKTGKNRCVY 428 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 239 bits (610), Expect = 9e-62, Method: Composition-based stats. Identities = 57/158 (36%), Positives = 92/158 (58%), Gaps = 2/158 (1%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 + D LTG+ RR E +++ + L ++++DID FK VNDTYGH +GD VL Sbjct: 312 ATTDPLTGIANRRYALEQAALEIKRNQRTGTPLSVVMMDIDHFKKVNDTYGHHVGDQVLM 371 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 +A S R+ + V R+GGEEF+I++ + N A +I Q +++ + +EG+++ Sbjct: 372 EVAQTCRSHCRESDLVSRFGGEEFLILLPSTNLNGAQTHAEKIRQAIEDLSFPTAEGNVS 431 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 +T + GVS+ E +D V+ RAD A+Y+ K GRN Sbjct: 432 VTASFGVSQWQGETKIDRVVSRADAALYQAKHDGRNCV 469 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 56/177 (31%), Positives = 95/177 (53%), Gaps = 5/177 (2%) Query: 114 TAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRF 169 +T+ K L + D LTGL RR E + + + L ++++DID F Sbjct: 873 IRDITERKATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLMMDIDHF 932 Query: 170 KLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRI 229 K VNDT+GH +GD VLR LA + R+ + + R GGEEF +++ + A R+ Sbjct: 933 KRVNDTHGHGVGDEVLRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAMEVAQRL 992 Query: 230 CQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCM 285 + ++ ++ G + ITV+ G + + + E ++ ++ RAD A+YE KQ+GRN+ + Sbjct: 993 RRAIEKASMATDAGTLRITVSIGAATSNNDAETVETLLKRADVALYEAKQSGRNKVV 1049 >UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KB78_CYAP7 Length = 547 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 76/237 (32%), Positives = 108/237 (45%), Gaps = 18/237 (7%) Query: 65 DNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL 124 D + V+ +D Q + N R L D F+ L+ T Sbjct: 308 KLDSMGLVKFVDQQWQPLCNLYRFYFLQQNLEQE-----DIFEPRLIKLTQE-----NKR 357 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGD 182 L +D LTG+ RR D + + R E L LMLLDID FK NDTYGH +GD Sbjct: 358 LRKLVYLDELTGIYNRRYFDHYLEREWRRMTREKAPLSLMLLDIDYFKNYNDTYGHQLGD 417 Query: 183 VVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 L+ +A + R + V RYGGEEF II+ +++ A I + + + AI H Sbjct: 418 ACLKKVAQAIQKSLKRSTDIVARYGGEEFAIIISQCDNKGALFLAEIIREQIKSLAINHK 477 Query: 242 EGHIN---ITVTAGVSRAFP--EEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVI 293 +N +T + GV+ P E ++I AD A+Y+ K GRNR F + Q +I Sbjct: 478 NSQVNLKIVTASIGVATIIPALETQPKMLIQMADEALYQSKHEGRNRVTFRNNQPLI 534 >UniRef50_A6X556 Diguanylate cyclase n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X556_OCHA4 Length = 473 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 11/252 (4%) Query: 42 EITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQD- 100 + HS FG W+ H L + + +H+ N L+ AI + Sbjct: 217 SDSPLHSLASSDFGLWLQHKADLMFSNSGTLENIRRNVEHIDNV---LLPAINSARKDNP 273 Query: 101 ----AHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP 156 A FQ + L++ + + D LT RR + ++R A Sbjct: 274 AGLAASLALFQTKIGEVKFLLSELFQAAAAMETGRDPLTRALNRRFMPSILTREVRMASQ 333 Query: 157 --LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIV 214 ++L ++++DID FK +NDTYGH GD VL+ +A + S R + V+RYGGEEF++ + Sbjct: 334 KAMDLSVLMIDIDHFKNINDTYGHSSGDAVLQQVAEAILSLCRPSDFVFRYGGEEFLVAL 393 Query: 215 KAANDEEACRAGVRICQLVDNHAITHSEG-HINITVTAGVSRAFPEEPLDVVIGRADRAM 273 A++ +A + + + + +G ++T++ GV+ ++ ADRA+ Sbjct: 394 VEADENKAFTIAEELRKQIAQQPLNLPDGARQSVTLSIGVAAFNGHPDYSHLVNAADRAL 453 Query: 274 YEGKQTGRNRCM 285 Y KQ GRNRC Sbjct: 454 YRAKQAGRNRCE 465 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 4/188 (2%) Query: 104 DAFQEGLLSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--L 159 D L +T+ Y L + +D LTG+ RR L+ + + Sbjct: 114 DNAITSLFLIVQDVTELATYEQKLIEMNTVDALTGVYNRRFLESRLKEECDRYGRYSRPF 173 Query: 160 YLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAND 219 LM++DID FK VNDT+GH GD+VL+ +A A+ R + + RYGGEEF ++ + Sbjct: 174 SLMMIDIDFFKKVNDTHGHQGGDLVLKNVAAGAAAMIRKSDFLARYGGEEFCCLLPETDC 233 Query: 220 EEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQT 279 + A + ++N + I +T++ G++ P++ + ++ RAD A+Y+ K++ Sbjct: 234 DAAETVAEHLRAHIENMEHLFQKKVIRVTISLGIACFAPDDSPETLVKRADEALYQAKRS 293 Query: 280 GRNRCMFI 287 GRNR + Sbjct: 294 GRNRFVRF 301 >UniRef50_C7HZA2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7HZA2_THIIN Length = 530 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 14/219 (6%) Query: 72 VRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL--LTIRS 129 VR++ S+ H+H +MLA + + +L+ +TD K LT + Sbjct: 318 VRMLTSSGNHIH-----VMLAASSLRFDNKA------AVLTSLVEITDRKQREQALTRMT 366 Query: 130 NMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTG RR E + L++A L+L+D D FK VNDT+GH +GD VL LA Sbjct: 367 QTDALTGFYNRRGFFERANALLQSARDQAPSLLLIDADHFKRVNDTHGHAVGDTVLVQLA 426 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + + R+ + + R GGEEF + + + E A RI V HA+ + +T+ Sbjct: 427 NRMNAALREGDVIGRIGGEEFAVFLPTTSLENAYELADRIRLSVSRHALRIQGLRVPMTL 486 Query: 250 TAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCMFI 287 + GV+ P E L+ +GRAD AMY+ KQ GRNR Sbjct: 487 SIGVTVLQPGESTLEAALGRADTAMYQAKQNGRNRVELA 525 >UniRef50_A1S6F8 Diguanylate cyclase n=2 Tax=Shewanella RepID=A1S6F8_SHEAM Length = 355 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 21/272 (7%) Query: 20 DAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAH 79 + H + + + ++++ + ++ + FG+ + LP +S H Sbjct: 102 NVHLE-TQLLINGLLSKISLLTSGSETFQLAIESFGQQLR---------LPQEA--ESLH 149 Query: 80 QHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPG 139 + + E+ + EN + + + L A +T+ L++ S D LTGL Sbjct: 150 RLVEGVLVEVDKVVSENADIHSSLKSMDQELNHLRAEITE-----LSVISLTDKLTGLNN 204 Query: 140 RRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDY 199 RR + + + P L+++DID FK NDT+GH GD VL +A L + Sbjct: 205 RRAFESRLAQEFLPSTP-KCSLLVIDIDHFKQFNDTWGHNAGDKVLVYVAQNLKQAVKGE 263 Query: 200 ETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI---NITVTAGVSRA 256 + V RYGGEEF+I++K + E+A ++ + N +T + ++ ++V+ GV++A Sbjct: 264 DLVARYGGEEFVIVLKDTSAEDAANIAEKLRDRIANKKLTLKKDNLDLGKVSVSIGVAKA 323 Query: 257 FPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + E + RAD A+Y K TGRNR D Sbjct: 324 YANETPEQFFERADGALYRAKGTGRNRVCLAD 355 >UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X007_DESRD Length = 531 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 3/208 (1%) Query: 90 MLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDH 149 L I + +DA + + +L + L + D LTGL RR E Sbjct: 318 WLEIERSEIRDARGRLWGQLVLMRDVSERKEAESRLLQMAATDELTGLYNRRRFFELARG 377 Query: 150 QLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGG 207 + A+ + + ++LLDID FK +ND YGH GD LR + + +AS R + + R GG Sbjct: 378 EFNRAKRYSSPMTILLLDIDYFKRINDEYGHDAGDTALRCIVSMIASQLRSLDVLARLGG 437 Query: 208 EEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVI 266 EEF+ ++ + +A R RI +++ AI E + +TV+ GV+ E + + +I Sbjct: 438 EEFVALLPETHQFDAERIAERIRSEIESTAINLFETTLFVTVSIGVAGYSKEMQDVGELI 497 Query: 267 GRADRAMYEGKQTGRNRCMFIDEQNVIN 294 RAD AMY K+ GRN+ +N++ Sbjct: 498 NRADEAMYRAKRDGRNQVCLATPRNLVQ 525 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 63/182 (34%), Positives = 95/182 (52%), Gaps = 3/182 (1%) Query: 110 LLSFTAALTD-YKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDI 166 L +AL + ++ L+ + D LTGL RR E +L + + ++LDI Sbjct: 113 LARVRSALREKERLDLMEKWATTDPLTGLYNRRFFFEQAQRELERVQRNETDASFIILDI 172 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAG 226 D FK VND YGHL+GD VL LA R + R+GGEEF+I + + E A Sbjct: 173 DHFKKVNDEYGHLVGDDVLEGLAKLFKETFRKVDLCCRFGGEEFVICLPDTDTEGALLVA 232 Query: 227 VRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 R + V+ + +G +++T++ GVS A L+ ++ RAD A+Y+ KQ GRNR Sbjct: 233 ERTRKKVEELSFNTEKGPLHVTISLGVSSANENTTLEDMLKRADDALYQAKQNGRNRTES 292 Query: 287 ID 288 +D Sbjct: 293 LD 294 >UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1B3_ACIDE Length = 445 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 64/222 (28%), Positives = 97/222 (43%), Gaps = 5/222 (2%) Query: 71 YVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSN 130 RL+ + G +L+ G L T ++ L + Sbjct: 218 LFRLVAPGTVEDADAGMVALLSQFVVLEATLSLVLMAFGALMLTN---EHITRELRHLAE 274 Query: 131 MDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 +D LT + RR + + NA+ L ++++D+D FK +NDT+GH GD VLR Sbjct: 275 VDPLTNVFNRRAFLTLLEKAISNAQRTQSGLPVLVIDLDHFKKINDTWGHQSGDEVLRHF 334 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 R + + R GGEEF I + A+ E + R+ LV +H G I +T Sbjct: 335 VALANGCLRKEDVMGRLGGEEFAIFLPNASSEGSQAVAERLRALVAHHPAMTGRGPIALT 394 Query: 249 VTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 V+ GV++ E D V+ RAD AMY K+ GRNR + Sbjct: 395 VSIGVTQYGGGETSDFVLQRADEAMYRAKERGRNRVETLSPP 436 >UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XLF8_MEIRU Length = 373 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 6/181 (3%) Query: 111 LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDR 168 L + A + ++ D LT L RR + + + +L A N L+L D+D Sbjct: 182 LLYMFAYLRRHYAQMHQMAHTDALTNLTNRRAMQQKLEGELDRARRYNRPFALLLADLDH 241 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK +NDTYGH +GD VLR +A LA R+ +++ R+GGEEF+I+ + ++A R Sbjct: 242 FKQINDTYGHSVGDQVLREVAGRLAQHLRESDSLARWGGEEFLILAPETDLQQAYLLAQR 301 Query: 229 ICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + + I + +T++ GV+ + + ++ RAD AMY K GRN+ + + Sbjct: 302 LLGAIRESPI----SGVQVTLSLGVACYRQGDSIAALLSRADEAMYRAKAGGRNQIVLEE 357 Query: 289 E 289 E Sbjct: 358 E 358 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 56/165 (33%), Positives = 92/165 (55%), Gaps = 5/165 (3%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIG 181 +L +S D LTG+ RR L+ + ++ A+ L L++ DID FK +ND++GH +G Sbjct: 610 MLLKQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMFDIDFFKHINDSFGHDVG 669 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D VL+ +A ++ R+ + RYGGEEF+II E+A ++ L+ N Sbjct: 670 DKVLKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKILAEKLRSLIRNLHFEEG 729 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 IN+T + GV+ + + ++ RAD A+YE K+TGRN+ + Sbjct: 730 ---INVTCSFGVASLEKHDTKETLLKRADEALYEAKKTGRNKVVV 771 >UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepID=A1WM32_VEREI Length = 612 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 4/203 (1%) Query: 87 RELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDES 146 RE+ I + + +L T+ L + + +D+LTG+ RR +E Sbjct: 405 REIEQKIATTALLKQANEDLERMVLERTSELARARDEAEHF-ARIDMLTGVANRRYFEEV 463 Query: 147 FDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYR 204 + + L ++L+DID FK VND YGH GD V+R +A R+ + V R Sbjct: 464 ATMEFARTQRGQQALSVILIDIDLFKQVNDRYGHAAGDAVIRAVARLAKESVRESDFVAR 523 Query: 205 YGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEP-LD 263 GGEEF +++ A R+ + + + H + T + GVS ++P Sbjct: 524 IGGEEFSVLLPGIGQAPAFATAERLRERIAACVVEHDGHSLGFTASFGVSEQVADDPGFS 583 Query: 264 VVIGRADRAMYEGKQTGRNRCMF 286 ++ RAD+A+Y KQ GRN+ + Sbjct: 584 SLLRRADQALYAAKQAGRNQVVV 606 >UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9R7Y4_AMMDK Length = 615 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 109/200 (54%), Gaps = 5/200 (2%) Query: 95 ENHWQDAHFDAFQEGLLSFTAA-LTDYKIYLLTIR-SNMDVLTGLPGRRVLDESFDHQLR 152 + ++ DA EG +S TAA + + ++ L R S +D LT L RR L+E HQ+ Sbjct: 395 QPYFFDAETKRSIEGYVSITAAMIANLRLSELNRRLSLIDPLTQLYNRRFLEEYLTHQVV 454 Query: 153 NAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEF 210 A+ LN ++ +D+D+FK VND YGH +GD+ L LA + R+ + V RYGGEEF Sbjct: 455 EAQRLNRPFSILFIDVDQFKNVNDFYGHEVGDIALTLLAQTIKQNLREADAVVRYGGEEF 514 Query: 211 IIIVKAANDEEACRAGVRICQLVDNHAITHSEGH-INITVTAGVSRAFPEEPLDVVIGRA 269 I ++ + E A +A ++ + V I G I +TV+ GV++ + VI RA Sbjct: 515 IAVLPGTDLEGAAQAAEKVRRAVAETPICLESGENIFLTVSIGVAQYRIGLNPEEVIQRA 574 Query: 270 DRAMYEGKQTGRNRCMFIDE 289 D AMY+ K G+N + E Sbjct: 575 DEAMYQAKIKGKNLVVAYHE 594 >UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgaris RepID=B8DLV9_DESVM Length = 381 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 2/184 (1%) Query: 103 FDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLY 160 F E T L L + D LTGL RR L E +++ A L Sbjct: 177 FAGLAEYTRRHTQRLLILLTQQLAESARTDELTGLANRRALCERLEYEQVRARRTGRPLS 236 Query: 161 LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDE 220 + + DID FK VND YGH GD+VL+++A L R +T+ R+GGEEF++++ ++ Sbjct: 237 IAICDIDHFKSVNDCYGHQCGDLVLQSVAGLLHDNLRHQDTICRWGGEEFLLLLPETDEA 296 Query: 221 EACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTG 280 A R ++ LV+ ++ +++T++ GV PE +D I +AD+ +Y K+ G Sbjct: 297 GAARLAEKLRSLVEAMEYSYHGIPVSVTLSFGVHTCGPEGDIDYHIRKADQKLYLAKEQG 356 Query: 281 RNRC 284 RNR Sbjct: 357 RNRV 360 >UniRef50_A8ESJ8 GGDEF domain protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ESJ8_ARCB4 Length = 433 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 16/285 (5%) Query: 14 NLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVR 73 N+ H +WL + ++V D I ++ LC FG+W+D G + Sbjct: 152 NIIYYYKMHLEWLEDLAKAIVLADI---NIFPEINHNLCTFGKWLDKEGLEIIKNSSKYK 208 Query: 74 LMDSAHQHMHNCGRELMLAIVE----NHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRS 129 + H+++H +++ ++E NH + + + LS L L+ + Sbjct: 209 NISKLHENLHFFAKQIKNCLIETQGNNHIILIYLEKCEMISLSLGTELALIDNTLINSEA 268 Query: 130 NMDVLTGLPGRRVLDESFDH--QLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 + D LTG R+ L + + + ++ A + + D D FK +NDT+GHL GD +L++ Sbjct: 269 SKDPLTGALNRQRLSQLYQNQLEISFATFEPFVIAMCDFDHFKNINDTFGHLAGDKMLKS 328 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 R + + RYGGEEF+II+ A N ++A +I + + N + I+ Sbjct: 329 FVHIAKKHLRTSDIIIRYGGEEFMIILPAINTKKAKDILNKIREDIANFVLNLDGNKISA 388 Query: 248 TVTAGVSRAFPEE-------PLDVVIGRADRAMYEGKQTGRNRCM 285 T++ G+ +PE + I D+ +YE K +GRN Sbjct: 389 TISIGMIEIYPENGNNSYFKDFENTISLVDKKLYEAKNSGRNTIC 433 >UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21PN7_SACD2 Length = 565 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 4/196 (2%) Query: 96 NHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIR--SNMDVLTGLPGRRVLDESFDHQLRN 153 + A A + + + + L R + D LT LP R +E H+L Sbjct: 369 SQSLSAQLKALMDRVKTVEEESEKSRAQLEEQRYKATHDPLTSLPNREAYNERAFHELHR 428 Query: 154 AEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFI 211 + L L + D+D FK +NDT+GH GD VL+ +A +++ R+ + V RYGGEEF+ Sbjct: 429 FKRYGHPLTLAVCDLDHFKKINDTFGHQAGDKVLKLVAQVVSTRLRNVDFVARYGGEEFV 488 Query: 212 IIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADR 271 +++ + E+A ++ + + + IT++ G+ + E+ ++ RAD+ Sbjct: 489 LVMPETDAEQAKTVLDKMRAAIAKTPFRFKDSPVTITMSFGIVQFRGEDSVESAFARADK 548 Query: 272 AMYEGKQTGRNRCMFI 287 A+YE K GRN+C+ Sbjct: 549 ALYEAKANGRNQCVIA 564 >UniRef50_Q2SPL3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL3_HAHCH Length = 373 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 3/203 (1%) Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFD 148 L + + + + L L + + +++ ++ D LTGL RR L + Sbjct: 165 LFMVMAQMALIGGFISKLRASLRVKNHQLNEA-LEKISVMASTDELTGLCTRRELMKQLS 223 Query: 149 HQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 ++ + L L LLDID FK +ND+YGH GD VL+ +A + S R + + RYG Sbjct: 224 NEFSRCRRSSGALSLCLLDIDHFKRINDSYGHQAGDAVLKKVAQTMQSLVRSIDCLGRYG 283 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVI 266 GEEF++I+ + A R+ + V + +T++ G + E ++ +I Sbjct: 284 GEEFLLILPQTPLDGAFITAERLRRAVMDIPFPEVAPEFRVTISLGAAELEEGEAMETLI 343 Query: 267 GRADRAMYEGKQTGRNRCMFIDE 289 R D+A+Y K GRNR + ++ Sbjct: 344 SRVDKALYAAKGAGRNRVVSAEQ 366 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 95/187 (50%), Gaps = 8/187 (4%) Query: 108 EGLLSFTAALTDYKI--YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLML 163 E L+ LT+ K L S D LT RR E + ++ A+ L++ Sbjct: 482 EKLIETFIDLTERKKLEEQLYRLSITDYLTQAYNRRYFTEMLEREIERAKRTKMPFALIM 541 Query: 164 LDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEAC 223 LDID FK VND +GH GD+VL+TLA + + R + + R+GGEEF+I++ E+A Sbjct: 542 LDIDHFKNVNDRFGHAAGDLVLKTLANLIKNRIRQTDCLARWGGEEFVILLPNTPVEKAA 601 Query: 224 RAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 + + + I G +T + GV+ P + LD ++ RAD+ +Y K +GRN Sbjct: 602 GLAEELREQLSMLEIP---GVGRVTASFGVTGYCPGDTLDTLLMRADQMLYTAKASGRN- 657 Query: 284 CMFIDEQ 290 C+ E+ Sbjct: 658 CVRFSEK 664 >UniRef50_Q2RLY1 Diguanylate cyclase (GGDEF domain) n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLY1_MOOTA Length = 357 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 5/227 (2%) Query: 65 DNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL 124 +N P + + LM+ +V Q A A + ++ Sbjct: 123 ENLANPSSWAILGGWVAIAGFFYYLMVGLVVKARQAASLQA-EVEYTRHEYQEACKRLAA 181 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLR-NAEPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 + + + D LTG+ R ++F + L +P L +++LDID FK +ND YGHL G+ Sbjct: 182 MEMAAITDDLTGIYNYRYFVQAFSNLLNSRQQPRYLAVLMLDIDYFKEINDAYGHLTGNR 241 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VL LAT L TR+ + V R+GGEEF +I+ + A + RI + + H Sbjct: 242 VLAELATILKECTREQDVVTRFGGEEFALILPDTDYHGALQVAERIRKAIAEHTFQAEGT 301 Query: 244 HINITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNRCMFID 288 I++TV+AGV+ +P + D +I RADRA+Y+ K TGRN Sbjct: 302 AIHVTVSAGVA-VWPVDGTDKKDIIARADRALYQAKTTGRNSVCAYQ 347 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 5/201 (2%) Query: 92 AIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQL 151 + E ++ L + + ++ L + D LTGL RR LDE+ + ++ Sbjct: 439 NVSERKAVESALRETNRQLHARIEEIGRLQVA-LQELAVRDSLTGLYNRRYLDETLEREV 497 Query: 152 RNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEE 209 A + L L++LDID FK VNDTYGH +GD VLR LA+ L++ R + RYGGEE Sbjct: 498 SRARREGIPLSLVMLDIDHFKQVNDTYGHQVGDEVLRILASTLSADIRAEDVACRYGGEE 557 Query: 210 FIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA-FPEEPLDVVIGR 268 F+I++ E V+ ++ H I T++ GV+ + D + Sbjct: 558 FLILLPNMPLETTMLRAQGWRSAVEALSVKHGNFQITFTISLGVAAYPEHGKTPDDLTRC 617 Query: 269 ADRAMYEGKQTGRNRC-MFID 288 AD+A+Y K GRN+ +F D Sbjct: 618 ADQALYRAKNEGRNQVSVFFD 638 >UniRef50_A1KC37 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KC37_AZOSB Length = 475 Score = 236 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 11/274 (4%) Query: 23 YQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDND---ELPYVRL-MDSA 78 W +++A + + S FG W+ H + ELP +R M Sbjct: 205 LDWENRFLQAMMAGQSGDELPLISDSA----FGLWLQHKAVAVFEGSAELPSIREGMRRL 260 Query: 79 HQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLP 138 + + R+ M ++ E A Q L + + + S D LT L Sbjct: 261 DRDLIPLCRQQMESLDERGESRRLIKAVQSELGQLKFLIGAMFERFVDLESGKDALTQLL 320 Query: 139 GRRVLDESFDHQ--LRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT 196 RR L + + + + L+L+D+D FK +ND +GH GD VL+ +A+ L + Sbjct: 321 NRRFLPAILTRETEIARNQHKSFALLLVDVDHFKQINDVHGHDAGDRVLQQIASLLLNTV 380 Query: 197 RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG-HINITVTAGVSR 255 R + V+RYGGEEF++++ + + A R +I Q V + + +T + GV+ Sbjct: 381 RSGDFVFRYGGEEFLVLLVEVDRQHAARVAEKIRQRVQQETFLLPDSRQLQVTASVGVAL 440 Query: 256 AFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 +I +AD A+Y K GRNRC F + Sbjct: 441 HDGHPDYQRLINQADDALYRAKTGGRNRCEFATD 474 >UniRef50_C6DCR6 Diguanylate cyclase n=6 Tax=Pectobacterium RepID=C6DCR6_PECCP Length = 532 Score = 236 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 62/179 (34%), Positives = 102/179 (56%), Gaps = 6/179 (3%) Query: 108 EGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDID 167 + ++ F L +I L+++++ D LTGL RR + ES + L + + +++DID Sbjct: 345 KRVILFGTLLLHKRIGKLSLQAHTDPLTGLLNRRGIYESIELILPKSNQ--VAAIVIDID 402 Query: 168 RFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGV 227 FK VNDTYGH IGD V+R LA + +R+ + + R GGEEF+ ++ + ++A Sbjct: 403 HFKRVNDTYGHNIGDDVIRLLAKSIKQGSRESDLICRTGGEEFLALLPDTDMKQAVDIAE 462 Query: 228 RICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCM 285 R+ + V+ + E NIT++ GV+ P E +D V+ AD A+Y+ K GRNR + Sbjct: 463 RLRKKVEKMPLPIPE---NITISLGVTCFIPGAEQIDNVLKIADDALYQAKHEGRNRVV 518 >UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WIR5_CHLAA Length = 589 Score = 236 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 5/206 (2%) Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTD-YKIYLLTIRSNMDVLTGLPGRRVLDESF 147 L+ + + + A +A + + AL + ++ + ++ D LTGL RR + Sbjct: 377 LVWSNHHDAYTMADLNALELLAATVAVALHNAFRFAQIQSQAITDNLTGLANRRHFLQVL 436 Query: 148 DHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRY 205 ++ + + ++D+D FK +NDT+GH+ GD VLR +A RD + + RY Sbjct: 437 HQEMERNRRYHTPVSIAMIDVDHFKQINDTFGHIAGDYVLREIARRCRQQLRDVDVLARY 496 Query: 206 GGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE--EPLD 263 GGEEF +I+ E+A +A R+ ++ I IN T++ GV+ P Sbjct: 497 GGEEFGLILPETTYEQALKATERLRTVLATTPIMIDGRQINPTISIGVASFHPTVYPDPS 556 Query: 264 VVIGRADRAMYEGKQTGRNRCMFIDE 289 +I ADRA+Y KQ GRNR + E Sbjct: 557 SLIADADRALYLAKQQGRNRVCGVQE 582 >UniRef50_B9Z5H6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z5H6_9NEIS Length = 650 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 4/208 (1%) Query: 90 MLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDH 149 + I E + E L + + L + D LTG+ RR LD++ Sbjct: 436 INDISERKRLEHSLKTANEALRQHLNEIESLQSG-LKEQLVRDPLTGVFNRRYLDDALPR 494 Query: 150 QLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGG 207 L + A + L++LD D FK +NDTYGH GD VL TL L R + V RYGG Sbjct: 495 VLAHTLALGKPVALLMLDADHFKRINDTYGHKAGDCVLSTLGARLRDSLRSNDMVCRYGG 554 Query: 208 EEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA-FPEEPLDVVI 266 EEF+I++ + E A ++ ++V I + +N+TV+ GV+ + E + ++ Sbjct: 555 EEFLIVLPGMSLEHAIAKAEQLRKVVQQWPIEALDHTLNVTVSIGVACSPLHAEDAESLV 614 Query: 267 GRADRAMYEGKQTGRNRCMFIDEQNVIN 294 AD A+Y K +GR+R + ++ Sbjct: 615 HAADTALYVAKSSGRDRLCVAEPPAGVS 642 >UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales RepID=A3WKT4_9GAMM Length = 364 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 63/169 (37%), Positives = 93/169 (55%), Gaps = 3/169 (1%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIG 181 L + D LT L RR + E L+N AE N+ ++LLD+D FK VNDT+GH +G Sbjct: 181 QLRFYATTDPLTKLRNRRHMSELLKRALQNKHAEQRNVSVLLLDLDHFKSVNDTHGHEVG 240 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI-TH 240 D VLR A L RD++ V R+GGEEF++ + N A + RI + + + T Sbjct: 241 DKVLRITADILRDTVRDHDKVSRWGGEEFLVFLPRTNLNHAAQVAERIRKAIAKYPWHTV 300 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 +I +T + GVS P++ ++ ++ RAD A+Y GK+ GRN E Sbjct: 301 INENIQLTTSIGVSELKPDDSVNTLVKRADDALYRGKEAGRNWVELESE 349 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 60/164 (36%), Positives = 96/164 (58%), Gaps = 3/164 (1%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGD 182 L ++ D LTGL RR + + D + + A L L L++LD+D FK +NDTYGH GD Sbjct: 257 LKRLASTDELTGLKNRRQIMKRLDEEYQRAIRLGEPLCLIMLDLDHFKKINDTYGHPFGD 316 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 +VL+ +A ++ R Y+ + R GGEEF+I+ EEA R+ V+ I + + Sbjct: 317 LVLKCVAGHMKKALRRYDVLGRIGGEEFLIVSPGTTREEAVVLAQRLRSTVEMEKIAYED 376 Query: 243 GHINITVTAGVSRAF-PEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + ITV+ GV+ + ++ +++++ RAD A+Y KQ GRNR + Sbjct: 377 KKVTITVSCGVAFLYKGDDNVEILLKRADSALYIAKQEGRNRVV 420 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 93/201 (46%), Gaps = 8/201 (3%) Query: 99 QDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EP 156 Q + + T L + L S D LT + RR DE + + A Sbjct: 361 QRQANLTLESRVRERTEEL-EQANEQLRAISLTDGLTHVANRRRFDEKLETEWNRALRHE 419 Query: 157 LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVK 215 L L+LLDID FK VND +GHL+GD L LA+ L+ R + V RYGGEEF I++ Sbjct: 420 HELSLILLDIDHFKQVNDRFGHLVGDDCLVALASILSDEVQRSGDLVARYGGEEFAILLP 479 Query: 216 AANDEEACRAGVRICQLVDNHAITHSEG--HINITVTAGVSRAFPEEPLD--VVIGRADR 271 + A + R+ V + E +++T++ GV+ P D +I RAD Sbjct: 480 TTDVAGAQQVAERMRLSVARTPVNSGEHMSPVSLTISLGVATLTPNRQSDCQELIRRADE 539 Query: 272 AMYEGKQTGRNRCMFIDEQNV 292 A+Y K GRNR + + V Sbjct: 540 ALYAAKSDGRNRVVVWHPKAV 560 >UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IJX5_PSEHT Length = 621 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%) Query: 91 LAIVENHWQDAHFDAFQEGL-LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDH 149 L++ E+ Q+ + L T + K L + D LTG+ RR D+ Sbjct: 409 LSLQESVRQELETQVDERTFELQVTLRELEEKNRELEQLNMEDPLTGIKNRRFFDKKLVM 468 Query: 150 QLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYG 206 +LR + L +++LDID+FK++NDTYGHL GD V+RT A + R + V RYG Sbjct: 469 ELRRSRREQTPLSVIMLDIDKFKVINDTYGHLTGDQVIRTAADTIKKQLQRPLDEVARYG 528 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE--PLDV 264 GEEF++++ ++ A +I + + + + I+ T++AGV + E+ ++ Sbjct: 529 GEEFVVLLPNTQNDGAIAIAEKIRHAIATNNVHVAGTTISFTISAGVYTSVAEDINNPEI 588 Query: 265 VIGRADRAMYEGKQTGRNRCMFIDEQNVINR 295 RAD+A+Y KQ GRN+ + +R Sbjct: 589 FTERADKALYFAKQHGRNQVINFPIPQSQSR 619 >UniRef50_A8UV88 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UV88_9AQUI Length = 475 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 58/233 (24%), Positives = 108/233 (46%), Gaps = 8/233 (3%) Query: 67 DELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY------ 120 ++ ++ M + + + V + +L+ L Y Sbjct: 239 RDITMLKNMAYKFKELDFSDIPKLSEQVRKDRTRDELFTLKSSVLNMAQELEAYIKELEK 298 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGH 178 K + D LTGL RR E+ + ++ L L+++DID FK +ND YGH Sbjct: 299 KKEKFEELAYTDPLTGLNNRRFFMENARTIIDLSKRYREPLSLLMMDIDNFKSINDNYGH 358 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 +GD+VL+ LA + R + R+GGEEF++++ +++ A RI N ++ Sbjct: 359 DVGDLVLKKLAEVIRKNVRTSDIPARFGGEEFVVLLPRTDEKGALMVAERIRNEFRNSSV 418 Query: 239 THSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 I +V+ G+S E+ +D +I +AD A+Y+ K++G++R + E++ Sbjct: 419 KVDGKDIWTSVSIGLSVLSEEDDIDSLIKKADEALYQAKRSGKDRVVIYREED 471 >UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XS30_DESMR Length = 498 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 4/166 (2%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIG 181 + IR++ D LT + RR DE +LR + + L+++DID FK +ND YGHL+G Sbjct: 314 QVKIRADHDGLTRIHNRRAFDERLIDELRRHQRYRHAMSLLMVDIDHFKGINDRYGHLVG 373 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D VLR + + L+ R + RYGGEEF++I+ +E+A R+ + H Sbjct: 374 DHVLREVGSILSETLRSTDFTARYGGEEFVVILPQTAEEQARILAERLRGAIAEARFVHD 433 Query: 242 EGHINITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCM 285 +ITV+ GVS P ++ +AD+A+Y+ K GRN+ Sbjct: 434 GEDFSITVSIGVSALQPGALTRRKDLLEKADKALYQAKHLGRNQVC 479 >UniRef50_D2L2K3 Diguanylate cyclase with GAF sensor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2K3_9DELT Length = 499 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 4/166 (2%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIG 181 + +R++ D LT + RR DE +LR + + L++LDID FK +NDTYGHL+G Sbjct: 314 QVKVRADHDGLTRIHNRRAFDERLVEELRRHQRYHHPMSLLMLDIDHFKGINDTYGHLVG 373 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D VLR + + R + RYGGEEF+II+ +E++ R+ L+ + H Sbjct: 374 DHVLREVGRLMTETLRSTDFTARYGGEEFVIILPQTAEEQSRVLAERLRGLIADARFVHD 433 Query: 242 EGHINITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCM 285 +ITV+ G + P ++ +AD+A+Y+ K GRN+ Sbjct: 434 GHPFSITVSIGAATLLPGALSKRKDLLDKADKALYQAKTLGRNQVC 479 >UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BW86_DESAD Length = 555 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 11/185 (5%) Query: 119 DYKIYLLTIRSNMDVLTGLPGRRVLDESFDH----QLRNAEPLNLYLMLLDIDRFKLVND 174 D + L + D LTGLP RR L + +R +P LM++DID FK++ND Sbjct: 366 DRTVQELQKSAVTDQLTGLPNRRYLMKEGTRLVDIAIRAGQP--CSLMIMDIDHFKVIND 423 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 TYGH +GD+VL+ ++ R + + RYGGEEF+++ ++ + R+ Q V+ Sbjct: 424 TYGHTVGDIVLQQISKAFQEVVRSSDIIARYGGEEFVVVAPGSDIDSGRTLAERLRQSVE 483 Query: 235 NHAITHSEGHINITVTAGVSRAFPE-----EPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 + E + T++ GVS + + + ++ RAD A+Y+ K TGRNR + Sbjct: 484 ARIFNNDEQPLTCTISIGVSHYATDIKFGVDAYEDMLARADNALYKAKDTGRNRICIAEP 543 Query: 290 QNVIN 294 N + Sbjct: 544 HNKLT 548 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 6/197 (3%) Query: 92 AIVENHWQDAHFDAFQE-GLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQ 150 A+ +N +D AF++ + + LL +++ D LTG+ R +++ + Sbjct: 234 AVFKNETRDGAVIAFRDITVQKKNLQSLEGINELLEKQASTDALTGIFNRMKFNQTLTSE 293 Query: 151 LRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGE 208 ++ A+ L L+L DID FK VND+YGHL GD VL+ LA +AS R+ + R+GGE Sbjct: 294 IKRAKRYRVALSLILFDIDHFKQVNDSYGHLSGDTVLKHLARLVASNLREIDIFARWGGE 353 Query: 209 EFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGR 268 EF+I + E A + ++ ++N+ + ITV+ GV+ + ++ R Sbjct: 354 EFVIQAPETSLESAIKLAEKLRSKIENYVFPAPK---KITVSFGVATFRSSDNDITLVNR 410 Query: 269 ADRAMYEGKQTGRNRCM 285 AD A+Y K+ GRN+ + Sbjct: 411 ADEALYRAKEGGRNQVV 427 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 60/166 (36%), Positives = 94/166 (56%), Gaps = 4/166 (2%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGD 182 L +S D LTGL RR L+E+F +L L L+++D+D FK NDTYGH +GD Sbjct: 379 LRQQSIRDPLTGLYNRRYLEETFTRELARVQRRRQPLSLLMIDVDHFKQHNDTYGHALGD 438 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 +LR LAT+L + R + V RYGGEEF++++ + +A + + V+N A+T ++ Sbjct: 439 TLLRRLATHLQRFFRTEDIVCRYGGEEFVVLLPECDAPQAQARAEALRRSVENLAVTSND 498 Query: 243 GH-INITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + +T++ G + + ++ RAD A+Y K GRNR F Sbjct: 499 AEFVALTISIGGASWPDHATTPEDLLARADAALYRAKHRGRNRVEF 544 >UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Desulfovibrio vulgaris RepID=A1VA66_DESVV Length = 827 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 69/219 (31%), Positives = 105/219 (47%), Gaps = 7/219 (3%) Query: 71 YVRLMDSAHQHMHNCGRELMLAI-VENHWQDAHFDAFQEGLLSFTAALTDYKIYL--LTI 127 ++++ H + R M + VE H + F+ + +LS +T+ K L Sbjct: 588 LTEILETGHASFESVHRTAMGPVNVEVHARRIEFEG-RFVVLSSARDITERKNLEAALLR 646 Query: 128 RSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVL 185 + D LTG+ RR + + A L +++LDID FK VND YGH GD VL Sbjct: 647 EATTDPLTGVRNRRQFFVDANREFARALRHDSGLAVLMLDIDHFKNVNDLYGHQAGDEVL 706 Query: 186 RTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI 245 R A R Y+ R GGEEF ++ AA+ EEA R+ + V+ ++ + + Sbjct: 707 RAFAACCVEALRAYDVFGRLGGEEFAALLPAASPEEAMETAERLRKRVERRSVVYEGTAL 766 Query: 246 NITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNR 283 TV+ GV+ + D ++ RADRA+Y K GRNR Sbjct: 767 QCTVSVGVTSLAAADLGFDDMLRRADRALYAAKDHGRNR 805 >UniRef50_B4SPL2 Diguanylate cyclase n=3 Tax=Stenotrophomonas RepID=B4SPL2_STRM5 Length = 471 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 5/286 (1%) Query: 6 TEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLD 65 + +++ N+ + L+ ++++ A + +DN S +FG W H G Sbjct: 174 YRLFSLVQNVGTERERQRALLLDWENALLYALAGHVQASDNASLATSEFGLWFTHKGIPS 233 Query: 66 NDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLL 125 E + + + G + + A A +E L + +T + Sbjct: 234 FGESSETQQVGQLMARID--GHLQRASGDAPAQRLAVLPAIREDLAAIRTLMTLLFERIG 291 Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQ--LRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 + + D LT L RR L + L L+LLD+D FK +ND +GH GD Sbjct: 292 ELDAGSDALTNLLNRRFLPTVLRREIELATRNRTPFSLLLLDLDHFKAINDGHGHDAGDR 351 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 L+ +A L TR + ++RYGGEEF++++ AA++ +A + + + + + G Sbjct: 352 ALQHVAGVLGQLTRGSDYLFRYGGEEFVVVLVAASESQAAVIAESLRRQIAKSPVPLANG 411 Query: 244 H-INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 +++T + GV+ + ++ RAD AMYE K++GRNR + Sbjct: 412 QVLSLTASIGVAGHDGHPDYERLMARADAAMYEAKRSGRNRVVVAS 457 >UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6I5_BREBN Length = 530 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 10/206 (4%) Query: 87 RELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDES 146 +E+ L+ HW + F K LT + D LTGL RR L+E+ Sbjct: 333 QEVELSEGSQHWNRE--AELLSRAIRFALTNIKKKTEQLTHDARTDPLTGLTNRRTLEET 390 Query: 147 FDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 + AE + +M++D+DRFK +NDTYGH GD VLR A ++S R + R+G Sbjct: 391 MQKWM--AEQIPFSIMMMDLDRFKAINDTYGHQAGDEVLRHFAKIISSSLRPEDVSCRFG 448 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE--PLDV 264 GEEF+++V EEA + RI + ++ + +TV+ G++ +P + Sbjct: 449 GEEFVVLVSHTGLEEAYQVAERIRRALETRTNPIGQ---RLTVSQGIA-HYPSHAVSPEG 504 Query: 265 VIGRADRAMYEGKQTGRNRCMFIDEQ 290 ++ AD AMY+ K+ GRN+ M +E+ Sbjct: 505 LLHVADEAMYKAKRAGRNQTMIAEEE 530 >UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM24_DESAH Length = 488 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 12/240 (5%) Query: 58 IDHLGPLDNDELPYVRLMDSAHQHMHNCGRELML------AIVENHWQDAHFDAFQEGLL 111 I PL + + ++++ G L + AI + F G++ Sbjct: 238 IHAGSPLSFQYKKDNKNIYVNNRYIPEFGWYLFVEQCGDKAIAKVRNTLVLNLVFSFGII 297 Query: 112 SFTAALTDYKI----YLLTIRSNMDVLTGLPGRRVLDESFDHQLR--NAEPLNLYLMLLD 165 +T+ I LT ++ D LTG+ RR D D L+ + L ++L D Sbjct: 298 GLILIVTNLTIASFQKRLTKMASTDKLTGVYNRRAFDIIIDQTLKEIQRKQTPLSIILFD 357 Query: 166 IDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRA 225 +D FK VNDTYGHL GD +++T A R+ + + R+GGEEF+I++K + +A + Sbjct: 358 LDHFKRVNDTYGHLAGDYIIQTTVGTAARTIRNSDILCRWGGEEFLILLKGCDLGDAMKT 417 Query: 226 GVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 +I V + + + I +T++ GV+ ++ + ++ RAD+A+Y K +G+NRC Sbjct: 418 AEKIRTAVASQPARYGDDQICVTISVGVTEHTGQDTKETLLKRADKALYLAKASGKNRCE 477 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 2/173 (1%) Query: 117 LTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVND 174 + K L + D LT L RR DE ++ + E L L ++D+D FK +ND Sbjct: 827 MVAEKTKELKGLARQDSLTQLGNRRAFDEQLQYEFKRCERSEQPLSLAIIDVDHFKSIND 886 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 + H+IGD VL L+ L++ RD + + R+GGEEF +++ +EA +A RI Q ++ Sbjct: 887 RFLHVIGDQVLIELSALLSNMLRDIDYIARWGGEEFALLMPETTAKEALQAAERIRQRIE 946 Query: 235 NHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 + + H + +TV+ GV+ + ++ AD+A+Y+ KQ+GRNR Sbjct: 947 DTSYQHLADELAVTVSIGVASSEHYPNHSALLVAADKALYKAKQSGRNRTELA 999 >UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W79_COLP3 Length = 334 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 24/270 (8%) Query: 25 WLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHN 84 WL SV+ + F W ELP+ R + + + M Sbjct: 81 WLSRKLSSVLQLNTPS-------------FCSWQQRHH---LFELPHTRPITTDSEFMAQ 124 Query: 85 CGRELMLAIVENHWQDAHFDAFQEGLLS--FTAALTDYKIYLLTIRSNMDVLTGLPGRRV 142 L +E H E + + + S +D LT + RR Sbjct: 125 NCTFL---PIETDVNGKHICILIEDVTDACHYQMQLQKTLAEIAQISRIDGLTQVYNRRH 181 Query: 143 LDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYE 200 +S + + A L L++LD+D FKL+ND YGH GD+VL ++ +++ R + Sbjct: 182 WQDSLEQEYAKARRHDKKLSLIMLDLDHFKLLNDNYGHQGGDMVLIEVSALISTLLRVED 241 Query: 201 TVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE 260 T RYGGEEF II+ + A RIC+++ T+++ I +TV+ GV++ +E Sbjct: 242 TFGRYGGEEFAIILPETDSAGAIELAQRICRIIATTPFTYNDQVIKVTVSLGVAQLSSKE 301 Query: 261 P-LDVVIGRADRAMYEGKQTGRNRCMFIDE 289 + +I +AD A+Y+ K GRN+ E Sbjct: 302 SNYEELITQADSALYQAKSQGRNQVCNAAE 331 >UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY29_9AQUI Length = 336 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 4/185 (2%) Query: 110 LLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNL--YLMLLDID 167 + SF K LL ++ +D LTGL R L+E+ ++ A+ L++ D+D Sbjct: 153 IFSFIVKEELEKKRLLE-KAIIDHLTGLYNRFYLEEAGAREIARAKRYGFPISLIMFDLD 211 Query: 168 RFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGV 227 FK VNDTYGH +GD VL A+ ++S R + RYGGEEF++++ EEA + Sbjct: 212 NFKQVNDTYGHQVGDRVLVKFASIVSSNVRSTDMPVRYGGEEFVVLLPHTYPEEAVKVAE 271 Query: 228 RICQLVDNHAITHSEGHINITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCMF 286 RI + + + +TV+AG+S E L +I AD+AMYE K+ G+NR Sbjct: 272 RIREEFEKFLFRFEGEVMRLTVSAGISFCNSGECSLGELIQMADKAMYEAKEKGKNRIEV 331 Query: 287 IDEQN 291 Q Sbjct: 332 FSYQT 336 >UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0Y0_9NEIS Length = 528 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 4/201 (1%) Query: 90 MLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDH 149 ++A + F + + L + L + D LTGLP RR L+E+ + Sbjct: 316 LIAAFVGFFGYRMFTYWLDSSTRLVNELAEA-NSKLAHLARTDTLTGLPNRRALEEALEQ 374 Query: 150 QLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGG 207 QL+ + L+LLDID FK+VND YGH GD V+R L ++ R+ + R+GG Sbjct: 375 QLQRSRRNGEQASLVLLDIDHFKVVNDRYGHDAGDAVIRALGKAMSETIRNVDVAGRWGG 434 Query: 208 EEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIG 267 EEF++++ ++E A R+ V++ + H E H+ T++ GV+ + + Sbjct: 435 EEFLVVLANVDEEGAAAFAERLRTRVESSTVAHGELHVRYTISLGVAPLSTPH-REAWLK 493 Query: 268 RADRAMYEGKQTGRNRCMFID 288 RAD A+Y K GRNR Sbjct: 494 RADEALYRAKLDGRNRTAIAQ 514 >UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX32_DESOH Length = 396 Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 5/170 (2%) Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN---LYLMLLDIDRFKLVNDTYG 177 + + S +D LT L RR E + +L + + + +++DID FK +NDTYG Sbjct: 221 REDVYRKMSTVDGLTRLTNRRTFIERSEKELSSGQRRPSSHISCIMIDIDHFKAINDTYG 280 Query: 178 HLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHA 237 H GD VL +AT L R + V RYGGEEF +++ A A + R + N Sbjct: 281 HAAGDKVLVKIATILTEKARPTDEVGRYGGEEFAMLLPATTLAGAVKVAERQRASIANAE 340 Query: 238 ITHSEGHINITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCM 285 I I +T + GV+ + + ++ ++ AD A+YE K+ GRNR + Sbjct: 341 IIVDGNIIQVTASFGVASCPSDDIDNINELLKTADVALYEAKRAGRNRVV 390 >UniRef50_C5T761 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T761_ACIDE Length = 398 Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 86/167 (51%), Gaps = 4/167 (2%) Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 ++ +D LTG+P RR L + L A E + L+++DIDRFK VNDTYGH+ GD Sbjct: 219 QQQALLDPLTGVPNRRALMAELERTLAQAVRERRPVALLMMDIDRFKRVNDTYGHVAGDA 278 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VL +A L R + + RYGGEEF+ ++ + A + V+ + Sbjct: 279 VLAAVAQCLKGGLRGQDFIGRYGGEEFLALLPGTDAAGAGVVAEHLRARVERLTMPWEPE 338 Query: 244 HINITVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQTGRNRCMFID 288 I +TV+ G P+E ++ AD+AMY K+ GRNR +D Sbjct: 339 DIRVTVSIGAHTRVPDEGTGAQAMVDVADQAMYAAKRAGRNRVERLD 385 >UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desulfovibrio RepID=Q310L5_DESDG Length = 525 Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 85/169 (50%), Gaps = 4/169 (2%) Query: 123 YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLI 180 + ++++ D LT L RR D +L + L LM+LDID FK +ND +GH Sbjct: 345 REMRLQADHDGLTQLHNRRHFDTRLREELDRHGRYSMPLTLMMLDIDYFKQINDRFGHQA 404 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VLR LA+ L R + RYGGEEF+ I+ ++++A R+ + +++ H Sbjct: 405 GDAVLRELASVLRETIRTTDYCARYGGEEFVAILPHTDEQQARVLAERLRKNIESRVFRH 464 Query: 241 SEGHINITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCMFI 287 I TV+ G++ P P D ++ AD A+Y K GRN Sbjct: 465 HGKTIQATVSIGLTGFKPGALTPRDELVREADAALYLAKANGRNVVCTF 513 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 7/186 (3%) Query: 108 EGLLSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLML 163 E ++ +T K L ++ D LT R + D + R A+ L+L Sbjct: 609 EYYIAMFHDITRQKELEAALEHQAFYDPLTDAANRGYFETLLDQEARRAQRYAHPCSLLL 668 Query: 164 LDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEAC 223 LDID FK +NDT+GH +GD VLR L L R+ + + R+GGEEF++++ + E Sbjct: 669 LDIDHFKRINDTFGHEVGDEVLRFLVHALKGRLREADVLGRWGGEEFVVLLPGTDAERGQ 728 Query: 224 RAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 ++ + V A +T++ GV+ P E + + RAD AMY K+ GRNR Sbjct: 729 HVAEQLREQVTATAFPCVGL---VTISLGVAECRPGESIRDWVKRADEAMYVAKKGGRNR 785 Query: 284 CMFIDE 289 + +D+ Sbjct: 786 VVRLDD 791 >UniRef50_C6D9C2 Diguanylate cyclase n=5 Tax=Pectobacterium RepID=C6D9C2_PECCP Length = 471 Score = 233 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 75/293 (25%), Positives = 129/293 (44%), Gaps = 4/293 (1%) Query: 2 IKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHL 61 +++ + +IL N + + L++ ++ + A+ ++ +FG W +H Sbjct: 179 NEESYRLFSILENASMERERQNASLLNWENAFIFSVATGTPLSSIQDLSDSEFGLWFNHK 238 Query: 62 GPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAH-FDAFQEGLLSFTAALTDY 120 G + +R + S R + A A + + L Sbjct: 239 GKSSFSNIQGIRTIASIITETDEYIRGYSTTALLTQQDYAPLLKAVRSKIYKINMLLGSL 298 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGH 178 + + S D LT L RR L H++ A L + ++DID FK VNDTYGH Sbjct: 299 FDEVQKLESGKDTLTLLLNRRFLPTILRHEISLAMHSSTPLSIAMIDIDHFKTVNDTYGH 358 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 GD +L+ +A L TR+ + V+RYGGEEF+I++ A R+ + + +H I Sbjct: 359 AAGDNILKRIAEVLYESTRNSDYVFRYGGEEFMIVLIETPKVAAHTIIERLRKKIQDHPI 418 Query: 239 THSEGH-INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 G I +T++AG++ + +I AD A+Y+ K GRNR + E+ Sbjct: 419 HLQNGESITMTISAGIAVYSGHPDYECLIKAADDALYQAKANGRNRIEYAQEE 471 >UniRef50_C5BK03 Ggdef domain protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BK03_TERTT Length = 580 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 9/235 (3%) Query: 59 DHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALT 118 + L ++ ++ A H+ EN A + S + + Sbjct: 347 TEIQSLKQAVTNHLDVIHKALAEFHSGHLR-----AENANLSDQLQALLAKVESIESESS 401 Query: 119 DYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVND 174 K + R+ D LTGLP R +E + R + L + + DID FK +ND Sbjct: 402 KTKELLEEERYRATHDSLTGLPNREAYNERVYQEYRRFTRYSRPLGIAVCDIDHFKKIND 461 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 +GH GD VL+ +A +++ R + V RYGGEEF+I++ + ++ +I V Sbjct: 462 NFGHQTGDRVLKLIARLISTRLRKVDFVARYGGEEFVILLPETSASQSRSVLDKIRAAVA 521 Query: 235 NHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 A + + IT++ G+S ++ ++ RAD+A+Y+ K GRNRC+ + Sbjct: 522 KAAFRFGDDPVKITLSFGISAFRSDDTIETAFQRADKALYQAKADGRNRCVVDTD 576 >UniRef50_C1XYG3 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYG3_9DEIN Length = 354 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 5/170 (2%) Query: 116 ALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVN 173 A + ++ ++ D LT L RR L+ +L+ AE L ++L D+D FK VN Sbjct: 176 AQLRENMLIMEQLAHTDHLTRLTNRRGLEPLLKQELQRAERYGLPFAVLLADLDHFKEVN 235 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 D +GH IGD VLR +A L R +TV R+GGEEF+I+ + +A + R+ +++ Sbjct: 236 DRHGHAIGDQVLREVAPRLDHNLRQADTVARWGGEEFLILAPTTDLAQAGQLAERLIEVI 295 Query: 234 DNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 + + G I +T++ GVS + L+ ++ RAD A+Y K GRNR Sbjct: 296 RSEPVV---GSIPVTISIGVSCYRAGDSLESLLQRADEALYRAKALGRNR 342 >UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNC9_9BACT Length = 494 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 103/187 (55%), Gaps = 7/187 (3%) Query: 104 DAFQEGLLSFTAALTDYKIY--LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NL 159 +A ++ +L + + + Y L +N D LTGL RR +D+ + + +L Sbjct: 310 EALKDMILVLKDKMENIQSYSDRLEYLANRDSLTGLWNRRKMDQILLSETERSSRYGSSL 369 Query: 160 YLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAND 219 ++++DID FK VND +GH +GD VL ++A + + TR ++V R+GGEEF++++ + Sbjct: 370 SVVMVDIDHFKNVNDNFGHEVGDTVLSSIAALMKNCTRAGDSVGRWGGEEFLVVLPETDV 429 Query: 220 EEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQT 279 + A R+ V+++ I IT + GV++ EP++ + RAD A+Y+ K+ Sbjct: 430 KGALEYAERMRSAVEDNVFHDD---IRITSSFGVTQYRSGEPVNEFVARADEALYDAKEK 486 Query: 280 GRNRCMF 286 GRNR Sbjct: 487 GRNRVEI 493 >UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N773_9GAMM Length = 462 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 56/168 (33%), Positives = 94/168 (55%), Gaps = 4/168 (2%) Query: 122 IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHL 179 L S D LTG+ R LD++F +L + +++LDID FK +ND+YGH+ Sbjct: 297 NKKLEQLSQRDHLTGIHNRYYLDQAFQQELTRYKRYQHGFTIVMLDIDLFKQINDSYGHV 356 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 +GD V++ +A L RD + V R+GGEEF+I+ + + A + +L+ T Sbjct: 357 VGDDVIKQIAMLLREHVRDQDVVARWGGEEFLILNPETSLDGARTLAEHLRRLIRRTPFT 416 Query: 240 HSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 + I++TV+ GV+ E ++ +I RAD A+Y+ KQ+GR++ + Sbjct: 417 VDK--IDVTVSFGVTDYRAGEDIETMIQRADSALYQAKQSGRDKTVVF 462 >UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5V1I0_ROSS1 Length = 681 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 4/160 (2%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 + +D LTG+ RR E+ + + ++ L ++++D+D FK VNDTYGH GD VLR Sbjct: 509 ATIDELTGVWNRRTFFENVRREFQRSQRTLHPLAILMIDVDHFKSVNDTYGHAAGDQVLR 568 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 +A + R + + RYGGEEF + + + A + R+ V+ G I+ Sbjct: 569 GVAERCRNQLRVIDIIGRYGGEEFAVALPETDIHAAGQIAERLRIAVERAPFVTDYGSIS 628 Query: 247 ITVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQTGRNRC 284 +T++ G + P++ LD VI RADRA+Y K++GRN Sbjct: 629 LTISVGAAVYHPDDHVTLDAVIDRADRALYIAKRSGRNSV 668 >UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Y1_DECAR Length = 413 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 2/176 (1%) Query: 118 TDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDT 175 + L + D LTG+ RR D + +++ + L +ML+D+D FK +NDT Sbjct: 210 NEQVTLELRAIAERDPLTGVFNRRSFLTLLDKSISHSDRMASPLSIMLIDLDHFKKINDT 269 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 +GH GD LR R+ + + R GGEEF I++ + +A R+ V Sbjct: 270 WGHKSGDEALRHFVAVAVPCIRNGDIIGRVGGEEFAILLPDTDISKAATVAERLRCEVAA 329 Query: 236 HAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 + + G I +TV+ GV+ +E +V + RAD AMY K GRN+ + N Sbjct: 330 RPVKNEHGSITLTVSIGVTHYRKDEAPEVTLHRADNAMYTAKDKGRNQVEVTPDLN 385 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 7/180 (3%) Query: 112 SFTAALTDYKI-YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDR 168 A+ + ++ L RS D LTGL RR L+ES + ++ A N+ ++++DID Sbjct: 823 QMALAIANLQLREELQNRSIRDPLTGLFNRRYLEESLEREINRACRNDHNVGVIMIDIDH 882 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK NDT+GH GD VL+ + L S R + RYGGEE +I+ A+ E + + Sbjct: 883 FKRFNDTFGHDGGDAVLKEVGKLLKSSLRASDIACRYGGEEMTLILPEASIENTYKRAEQ 942 Query: 229 ICQLVDNHAITHSEGHI-NITVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQTGRNRCM 285 + +L+ I H + IT + GV+ FPE D V+ RAD A+Y+ K+ GR+R + Sbjct: 943 VRKLIKQINIEHKRQSLGTITASLGVA-CFPEHGMTGDAVVQRADTALYQAKKEGRDRVV 1001 >UniRef50_B1KP16 Diguanylate cyclase n=6 Tax=Proteobacteria RepID=B1KP16_SHEWM Length = 485 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 107/197 (54%), Gaps = 3/197 (1%) Query: 93 IVENHWQDAHFDAFQEGLLSFTAALTDYK-IYLLTIRSNMDVLTGLPGRRVLDESFDHQL 151 I+ W + ++ A LT + L + ++ D LTG R++ +E F H L Sbjct: 287 ILNTFWVNIVLGLMVIVVILVIANLTLGRYQRKLEVMASTDKLTGATNRQMFEEYFSHSL 346 Query: 152 RNAE--PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEE 209 +NAE + ++LLDID FK VND +GH IGD+V++T+A + R + V R+GGEE Sbjct: 347 QNAEISATPVSVILLDIDYFKSVNDNFGHSIGDLVIKTVANIIRRQLRSEDIVCRWGGEE 406 Query: 210 FIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRA 269 F++++ + A RI + + I+ +E I ITV++GV++ EP +I R Sbjct: 407 FLLLLPNIDLSHAADMAERIRESIAERKISVNEHEIGITVSSGVAQYKLGEPRADLINRV 466 Query: 270 DRAMYEGKQTGRNRCMF 286 D A+Y+ K GR++ + Sbjct: 467 DVALYQAKDRGRDQVVL 483 >UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales RepID=D0J6R3_COMTE Length = 521 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 74/232 (31%), Positives = 107/232 (46%), Gaps = 10/232 (4%) Query: 68 ELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL--L 125 LP++ ++ AH + R+ A++ AF +F L L Sbjct: 273 SLPFIIMVAKAHSDIFTAWRK--RALIIACLMGVLTAAFIGLSFAFVTQLQRRIHAESEL 330 Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDV 183 + + D LTGL RR LDE D + A + L+ +DIDRFK+ NDTYGH GD Sbjct: 331 ALLARTDGLTGLNNRRRLDEMLDQEWHRARRNHSIFSLLFVDIDRFKVYNDTYGHQAGDD 390 Query: 184 VLRTLATYLASWTR-DYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 V+ T+A + R + RYGGEEFI+++ + E A I V ++ HS Sbjct: 391 VIATIAQCIGDNIRRPGDIAARYGGEEFIVVLPDTSLEGASCLAESIRAAVSQLSVEHSG 450 Query: 243 GHIN-ITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNRCMFIDEQN 291 ITV+ G + PE D VI AD A+Y+ K TGRN+ + + Sbjct: 451 SEFGYITVSIGCAAWEPEHDADVASVIRSADEALYKAKTTGRNKVVVFTKSP 502 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 62/174 (35%), Positives = 92/174 (52%), Gaps = 7/174 (4%) Query: 119 DYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQ----LRNAEPLNLYLMLLDIDRFKLVND 174 ++ L S +D LTGL RR E FD +R +P ++LDID FK +ND Sbjct: 152 EHLNEELKTASRVDGLTGLYNRRYWQERFDEMHKLCVRREKPS--TALMLDIDHFKRIND 209 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 TYGH GD V++ LA + R+ + RYGGEEF II+ ++ E+A RI QL Sbjct: 210 TYGHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDSSVEDAKIVAERIRQLAQ 269 Query: 235 NHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCMFI 287 + H I+ TV+ G+++ P+ + + AD+A+YE K+ GRN+ Sbjct: 270 RLVVEHEGESISFTVSLGLAQFSPDFKGAMAWLECADQALYEAKENGRNQYRIY 323 >UniRef50_B1KK06 7TM domain sensor diguanylate cyclase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KK06_SHEWM Length = 623 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 7/232 (3%) Query: 56 RWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTA 115 +W+ +LG L ++ H +L + + + + + + + T Sbjct: 383 QWLIYLGGFIEAFLLTTIMVLRLRDMQH---AKLKIELTHRQHLENYANELSQQVKLQTK 439 Query: 116 ALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN---LYLMLLDIDRFKLV 172 L + K T + +D+LTGL RR ES L A LYL+++DID FK + Sbjct: 440 QLLEAKEKAET-EARVDILTGLTNRRAFIESAHGFLARANRQPETHLYLLMIDIDHFKKI 498 Query: 173 NDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQL 232 NDTYGH GD L +A L+ R + V R GGEEF +++ + + A R+ + Sbjct: 499 NDTYGHSAGDAALVAVANSLSETIRTIDVVSRLGGEEFAALMENKDPQGAINLSERLRKA 558 Query: 233 VDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 ++ I H I +T + G+++ P + LD ++ +ADRA+Y+ K++GRN Sbjct: 559 IEELVIEHEGQQIKLTTSIGIAKWGPMDNLDTLMNQADRALYQAKESGRNCV 610 >UniRef50_B0KCF6 Diguanylate cyclase with GAF sensor n=12 Tax=Thermoanaerobacterales RepID=B0KCF6_THEP3 Length = 554 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 111/206 (53%), Gaps = 7/206 (3%) Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIY-LLTIRSNMDVLTGLPGRRVLDESF 147 ++L + N + + + + + A+T+ K Y +T +S D LT RR +++ Sbjct: 349 MVLHVETNVFDEDSVKIIEIIVDQASVAITNAKRYYEVTKKSITDPLTKTYNRRYFNDAL 408 Query: 148 DHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRY 205 + A+ + + L++ D+D FKL+NDTYGHL+GD VL+ +A + + R + V R+ Sbjct: 409 MENIMRADETSEPVSLIMFDLDNFKLINDTYGHLVGDEVLKEVAKRIKNNVRSDDIVARF 468 Query: 206 GGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE--EPLD 263 GGEEF +I+ E+A RI V + I +G I +T+T GV+ +PE + + Sbjct: 469 GGEEFAVILPKLTAEQAYMIAERIRNEVSSRPIRTDKGDIYVTITGGVAD-YPEKADSAE 527 Query: 264 VVIGRADRAMYE-GKQTGRNRCMFID 288 +I ADRA+Y GK GRN+ + Sbjct: 528 KLISHADRALYAGGKSKGRNKIAIYE 553 >UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCX8_9BURK Length = 600 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 66/230 (28%), Positives = 102/230 (44%), Gaps = 7/230 (3%) Query: 66 NDELPYVRLMDSAHQHMHNCGRELMLAIVE-NHWQDAHFDAFQEGLLSFTAALTDYKIYL 124 + + H REL+ + A + + T L Sbjct: 369 LLAFALADRFNQMRREKHMAQRELVSTQQQLVETLRASEQELAQRVEERTRQLQVA-NER 427 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGD 182 L S +D LTG+ RR D+ + E L L++LD+D FK ND +GH GD Sbjct: 428 LEALSMVDGLTGIANRRHFDQVLHKEWTRLERAGQPLALVMLDVDWFKRYNDHFGHQAGD 487 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS- 241 LR +A ++ +R + V RYGGEEF+II + +A + R C V + H Sbjct: 488 ECLRAVAQAISGVSRASDLVARYGGEEFVIIAPGTDGPQALQMAQRACDAVRALGMPHPL 547 Query: 242 EGHINITVTAGVSRAF--PEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 +TV+ GV+ P++ L+ ++G+AD A+YE K GRNR + + Sbjct: 548 AYEAVVTVSCGVAVTVPGPDDSLENLLGQADDALYEAKAQGRNRVVLAEP 597 >UniRef50_Q39SX4 Diguanylate cyclase (GGDEF domain) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SX4_GEOMG Length = 353 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 96/196 (48%), Gaps = 4/196 (2%) Query: 92 AIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQL 151 ++ E+ + D F E L AA + L S D LTGL RRV + + + Sbjct: 152 SLAESQYSDEFFGGVVENLARSLAA--ARECDRLKNLSMRDHLTGLYNRRVFEAMLEVEA 209 Query: 152 RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFI 211 R L+L+D+D FK VNDTYGH GD VL +A L R + V RYGGEEF Sbjct: 210 RKRTTKPFSLLLIDLDDFKRVNDTYGHGAGDQVLVAVAKMLRLSFRKSDVVSRYGGEEFG 269 Query: 212 IIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLD--VVIGRA 269 +++ + + A R Q V ++ ++ I TV+ G++ ++ VI A Sbjct: 270 VLLPDTSQDSARVVAERFRQNVATLSLPVNKEKIMPTVSVGIASVTLRLGIEVADVIEEA 329 Query: 270 DRAMYEGKQTGRNRCM 285 DRA+Y+ K TG+NR Sbjct: 330 DRALYQAKVTGKNRVC 345 >UniRef50_B5EIX9 Diguanylate cyclase n=2 Tax=Geobacter RepID=B5EIX9_GEOBB Length = 432 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 7/174 (4%) Query: 116 ALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKL 171 AL + K LL ++ D +TG+ RR E + + ++ L L L+ D+DRFK Sbjct: 252 ALQELKQANALLQSQATTDPVTGILNRRKCCELLESAIMESKRYGLPLALIFFDVDRFKS 311 Query: 172 VNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQ 231 +NDTYGH GD VLR LA ++ R + R+GGEEF+++V + A +I Sbjct: 312 INDTYGHDAGDSVLRELAGLVSGMIRKTDIFSRFGGEEFVLVVHNNDGRTARMLAEKIRS 371 Query: 232 LVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 V H+ H +T + GV+R +P++ + ++ RAD+AMY K GRNR Sbjct: 372 RVSQHSFIHVG---QVTASFGVARLYPDDSAESLVKRADQAMYSAKHAGRNRVE 422 >UniRef50_B7RW73 GGDEF domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RW73_9GAMM Length = 610 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 3/200 (1%) Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFD 148 L +A+ + A + + + TA L+ L + +D LTGL RR E + Sbjct: 402 LAMAVSMANRFTAMYSKLESEVAERTADLSAA-NRRLAEAARVDHLTGLLNRRGFTEEAE 460 Query: 149 HQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 ++R + L+L D+D FK ND +GH+ GD VL+ +A+ L TRD + + R+G Sbjct: 461 TEIRRMFRSGKSFSLVLTDVDNFKSFNDRHGHVCGDHVLKRMASILEERTRDVDRIARWG 520 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVI 266 GEEFI+++ E A ++ + + + + IT+T G++ E LD I Sbjct: 521 GEEFILLLPETETEGAANLAEKLRESIAENVFEFDNQRLKITMTFGIASFRRGESLDTCI 580 Query: 267 GRADRAMYEGKQTGRNRCMF 286 RAD A+Y GK+ GRN+ M Sbjct: 581 ARADTALYHGKEGGRNKVMI 600 >UniRef50_Q4ZZT3 GGDEF n=5 Tax=Pseudomonas syringae group RepID=Q4ZZT3_PSEU2 Length = 690 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 5/233 (2%) Query: 58 IDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDA-HFDAFQEGLLSFTAA 116 + +D R++D+ + + L + A + S Sbjct: 456 LQSSVQDASDLPSLKRVLDNRLEALLGTMDHYQLKRDAREREVASRLQGLAARVASMEQE 515 Query: 117 LTDYKIYLLTIR--SNMDVLTGLPGRRVLDESFDHQLRN--AEPLNLYLMLLDIDRFKLV 172 ++ +L R + +D LTGLP R E + ++ E +L + +LD+D FK + Sbjct: 516 ALGFRTHLEEQRQKALIDPLTGLPNRAAWGERLEREMARWHEEKNSLLVCILDLDHFKRI 575 Query: 173 NDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQL 232 ND YGHL GD VL+ +A L+ R + + R+GGEEF++++ A + + Sbjct: 576 NDGYGHLAGDKVLKIVANVLSKRLRADDFMARFGGEEFVMLLPATPPATGLKLLDELRAA 635 Query: 233 VDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 V++ + ITV+ G++ P E D I RAD+A+Y+ K+ GRNR Sbjct: 636 VESCPFHFKGERVTITVSIGMTAFRPSERSDTAIKRADQALYKAKENGRNRIE 688 >UniRef50_C0QMB4 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic substrate binding component n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QMB4_DESAH Length = 404 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 64/174 (36%), Positives = 93/174 (53%), Gaps = 5/174 (2%) Query: 117 LTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVND 174 L + K + + D LTGL RR D++F+++ A + +++ DID FK VND Sbjct: 192 LLEEKTRAIELLGQRDGLTGLYNRRYFDDAFEYEWNRAIRNRTAISIVMCDIDYFKRVND 251 Query: 175 TYGHLIGDVVLRTLATYLASWTR-DYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 +GHL GD LR A L R + + V RYGGEEFI ++ + E RI Q++ Sbjct: 252 AFGHLAGDAYLRLTADVLKQVVRRETDIVARYGGEEFIFLIPDDSLENTVGLAERIRQMM 311 Query: 234 DNHAITHSEGHINITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCM 285 +N A+T I TV+ GV+R P E + ++ AD AMY+ K GRNR + Sbjct: 312 ENTALTFDGQIIRATVSLGVARLSPRPFEKKETIVSNADNAMYQAKSRGRNRVV 365 >UniRef50_B8JB86 Diguanylate cyclase n=4 Tax=Anaeromyxobacter RepID=B8JB86_ANAD2 Length = 764 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 61/166 (36%), Positives = 84/166 (50%), Gaps = 5/166 (3%) Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDV 183 + D LTGL R E D L A+ L+L DID FK VNDTYGH +GD Sbjct: 589 ERLATTDGLTGLTNHRTFQERLDAHLGQAQRYGKRTSLLLCDIDHFKSVNDTYGHPVGDQ 648 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VLR +A LA R + V RYGGEEF I++ + A RI + V +G Sbjct: 649 VLRGVARTLARAARGTDVVARYGGEEFAIVMPETDTGGAMVIAERIREKVGQLVFETEQG 708 Query: 244 HINITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNRCMFI 287 + +T++ GV+ FP++ +I RAD +Y K+ GRN+ + Sbjct: 709 PLKVTLSLGVAT-FPDDGAQKPALIERADACLYHAKRHGRNQSVSA 753 >UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6Y0_KANKD Length = 469 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 5/195 (2%) Query: 97 HWQDAHFDAFQEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA 154 + Q F AL + K L + D LT + RR + + ++ + Sbjct: 266 YSQTELFQQIIREKKKSERALIELKAVNQKLEELAATDSLTRVANRREFMKRSEEEMSRS 325 Query: 155 EPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFII 212 + L LM++D D FK +ND YGH GD VL+ R + + R GGEEF + Sbjct: 326 SRNSTDLCLMVIDFDHFKEINDQYGHQAGDKVLKDFVKLAKEVMRPSDLLGRIGGEEFAL 385 Query: 213 IVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADR 271 ++ N A + R+ Q ++ +I I +T++ GV+ P+ + + + RAD Sbjct: 386 LLPETNIRSAVKVAERLRQHIEEESIVIGSKRIKLTISIGVAEYQPKVDTVKKWLHRADE 445 Query: 272 AMYEGKQTGRNRCMF 286 +Y+ K GRNR + Sbjct: 446 FLYQAKDKGRNRVVV 460 >UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4Y784_SHEPC Length = 368 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 120/262 (45%), Gaps = 22/262 (8%) Query: 29 MFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRE 88 + +S++ + + T + S L +FG + +++ +Q + E Sbjct: 121 LINSLLCKIVQLNQGTADFSGTLAEFGIKLQS-----------NSDINTLNQLVDGVMDE 169 Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFD 148 + ++ N + +A + + + + + L++ + D LT L RR + + Sbjct: 170 MQSLLINNQNMEQSLNAMGQEVQHLKSEMEN-----LSLAAMTDQLTSLYNRRAYEIAIQ 224 Query: 149 HQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 + A+ + L+++DIDRFK NDTYGH IGD VL +A L R + V RYG Sbjct: 225 DHIHRAQEQHSRCSLLIVDIDRFKQFNDTYGHQIGDKVLAYVALALKQCVRGDDFVARYG 284 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH----INITVTAGVSRAFPEEPL 262 GEEF++++ + +A + + + + +T + ITV+ G++ + Sbjct: 285 GEEFVVLLPNTHFHDALQVAETLRERISERHLTIGKDKKLSLGAITVSIGLASLQEGDDA 344 Query: 263 DVVIGRADRAMYEGKQTGRNRC 284 + + RAD+A+YE K GRN Sbjct: 345 ETLFSRADKALYEAKSDGRNCV 366 >UniRef50_C6P3N4 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3N4_9PROT Length = 387 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 5/182 (2%) Query: 109 GLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDR 168 G L TD ++ L + D LTG+P RR L + + + ++ L+++D D Sbjct: 209 GFLLMVKERTDREVLHL---AMTDSLTGVPNRRALMDYAERAMAQRGGRSVALLMIDADH 265 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK +NDTYGH +GD VLR L L R + + RYGGEEF ++ A+ E A + Sbjct: 266 FKRINDTYGHPVGDEVLRQLTRLLQQRLRGGDLLGRYGGEEFCVVAPDADAEGALKLAES 325 Query: 229 ICQLVDNHAITHSEGHINITVTAGVS--RAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + + V + + +G ++ITV+ G++ A L ++ AD A+Y K+ GRN+ + Sbjct: 326 LRESVASAVLDTEQGKLSITVSIGIAHSTADAGRALKDILAEADIALYSAKKGGRNQVVS 385 Query: 287 ID 288 Sbjct: 386 FS 387 >UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQN9_VIBSL Length = 405 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 4/187 (2%) Query: 112 SFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRF 169 ++ L + L S D LT L RR ++E + + N L +++LDID F Sbjct: 208 TYNWLLNARLMQSLYSSSMKDSLTQLYNRRAMNEMLRREWMRSVRHNHPLSVIILDIDHF 267 Query: 170 KLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRI 229 K VND +GH GD VL+ + L R + +RYGGEEF+I++ EAC+ ++ Sbjct: 268 KQVNDQHGHQTGDQVLKKIGIILQHNLRAADIPFRYGGEEFLIVLPDTRIGEACKVAEKL 327 Query: 230 CQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM-FID 288 +++ + N+T + G+S + E+ + +I RAD A+Y K+ GRN D Sbjct: 328 RIIIEETKF-WRQQSANLTASFGLSELWAEDKVPSMIKRADEALYYAKENGRNTVCALTD 386 Query: 289 EQNVINR 295 EQ + + Sbjct: 387 EQGKLTK 393 >UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA9_METML Length = 548 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 8/201 (3%) Query: 93 IVENHWQDAHFDAFQE--GLLSFTAALTDYKIYLLTI--RSNMDVLTGLPGRRVLDESFD 148 + + ++ A F+A + ++ A + K+ L + ++++D LT L R E + Sbjct: 345 WMNSVFKIAEFNALHQPIRMIGVHANIHSRKLLELELNQKAHIDYLTELNNRGHFMEQAE 404 Query: 149 HQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 +L ++ + + ++DID FK +ND++GH IGD+VL+ LA R+ + + R G Sbjct: 405 KELSRSQRYQKDMAMFMMDIDFFKKINDSHGHKIGDIVLKKLADVCRQTLREVDIIGRIG 464 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG-HINITVTAGVSRA-FPEEPLDV 264 GEEF I++ N EA R+ V + + +G + TV+ GVS ++ +D+ Sbjct: 465 GEEFAILLPETNRAEALEVAERLRLAVADSKVPMKDGLPVQYTVSIGVSSVASADDNIDM 524 Query: 265 VIGRADRAMYEGKQTGRNRCM 285 ++ RAD+A+Y+ KQ+GRNR Sbjct: 525 LLSRADQALYQAKQSGRNRVC 545 >UniRef50_Q1MYJ5 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Bermanella marisrubri RepID=Q1MYJ5_9GAMM Length = 642 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 13/232 (5%) Query: 71 YVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL------ 124 R +D AHQ + + H + ++ + T L++ L Sbjct: 408 QARSLDLAHQVTQEREKLYRAEMENLKIAREHNEVLEKTVDDRTKELSEALEELSNAHEK 467 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGD 182 L S D LT + R D+ + + + A ++ L++LDID FK VND +GH GD Sbjct: 468 LKNISVTDALTKIHNRYFFDQHWRSEFKRAHRHKMSIALIILDIDHFKKVNDNFGHPAGD 527 Query: 183 VVLRTLATYLA-SWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 + L+ +A + R+ + V R GGEEF +I+ ++ A +I ++ I+ Sbjct: 528 LCLQKVAQSIRIQANRESDLVCRLGGEEFAVILPGTDEMGAYEVAEKIRHTIEKRHISWE 587 Query: 242 EGHINITVTAGVSRAFPEEPLDV----VIGRADRAMYEGKQTGRNRCMFIDE 289 I ITV+ G+S P + + + +AD+A+Y+ K GRNR + + Sbjct: 588 GKTIKITVSIGISAMTPRKSDEKMRNIMFNQADQALYQAKGNGRNRTVIFES 639 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 5/183 (2%) Query: 112 SFTAALTDYKIYL-LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDR 168 + A+ + K+ L +S D LTGL RR L++ F ++ A+ ++ +++ DID Sbjct: 783 QVSLAIANIKLRERLENQSIRDPLTGLFNRRYLEQFFLQEIGRAKRYNHSIGVIMGDIDH 842 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK ND GH GD VL+T+ L S R + RYGGEE I++ + E+ Sbjct: 843 FKQFNDQLGHDAGDHVLKTIGRILQSNIRGSDIACRYGGEEMTIVLPQTSLEDTLVKAES 902 Query: 229 ICQLVDNHAITHSEGHI-NITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + Q + + + + + +TV+ GV+ E + +I ADRA+Y+ K GRNR + Sbjct: 903 LRQAIASMEVEYKGKELGTLTVSLGVACYPNHGETMVNIIQAADRALYQAKAAGRNRVVM 962 Query: 287 IDE 289 DE Sbjct: 963 ADE 965 >UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B9_DESRD Length = 578 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 6/188 (3%) Query: 104 DAFQEGLLSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NL 159 + ++ +T+ K L + D LTGL RR E D ++ A+ +L Sbjct: 389 EERITSIVGSAQDITERKRAEEHLRYLATTDELTGLYNRRHFMEILDTEIERAKRYEQSL 448 Query: 160 YLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAND 219 L+ LDID FK +NDT+GH +GD L LA L + R +++ R GGEEF +I + Sbjct: 449 ALISLDIDHFKTINDTHGHAVGDAALEHLAAQLLACKRQPDSLGRLGGEEFALIAPHTDR 508 Query: 220 EEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA--FPEEPLDVVIGRADRAMYEGK 277 A RI ++ I ++ T++ GV+ + +D ++ RAD A+YE K Sbjct: 509 AGATELAERIRSELERTPIELESTSLHPTISLGVTALNIQDNDTIDALLKRADDALYEAK 568 Query: 278 QTGRNRCM 285 +TGRNR + Sbjct: 569 RTGRNRTV 576 >UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXG9_HALOH Length = 499 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 10/286 (3%) Query: 9 DAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDE 68 D I + A + + + + G F + + PLDN E Sbjct: 217 DDIYTRKQNTLIASLDMSKEIVLDLSSGIYKELSRKKKVIAGKVSFDDDLSKIIPLDNIE 276 Query: 69 LPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLL-----SFTAALTDYKIY 123 + ++ + G+EL+ +I H Q L F+ AL + +Y Sbjct: 277 EG--KEIEYIIVPV-TRGKELIGSINIFSMDKGHLPILQHSFLESFANQFSVALQNALLY 333 Query: 124 L-LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGD 182 +N D LTGL L+ L L+++DID FK VND +GHL+GD Sbjct: 334 KKQEEMANRDGLTGLYNHAYFQNRLHLLLKQENKHPLTLIIMDIDNFKQVNDRFGHLVGD 393 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 VL+ LA L R+ + + RYGGEEF II+ ++ R+ +L+ ++ I Sbjct: 394 KVLKELAHLLKHNLREGDLIARYGGEEFAIILPETELKQGEFIAKRLRKLISDNEIVLDN 453 Query: 243 G-HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 + ITV+ GV++ + + I +AD+A+Y+ K+ G+NR Sbjct: 454 NRSLYITVSIGVAQYNKKWSQEEFIDKADQALYKAKEAGKNRVTLA 499 >UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIT1_HALO1 Length = 732 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 63/168 (37%), Positives = 90/168 (53%), Gaps = 5/168 (2%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGD 182 + + D LTGL R + L AE ++L D+D FK VNDTYGH IGD Sbjct: 554 METMATTDGLTGLTNHRTFQDRLVQLLDRAERTRQPAAILLCDVDHFKNVNDTYGHPIGD 613 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 VLR +A L R + RYGGEEF ++++A + E A RI + V + + Sbjct: 614 EVLRQVAGVLLRSVRKIDIPARYGGEEFAVVLEATDLEGAMNLAERIRKDVAALVVDSDK 673 Query: 243 GHINITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNRCMFID 288 G +T++ G++ FP++ D V+I RAD A+Y K++GRNRCM Sbjct: 674 GPFQVTMSIGIAS-FPDDATDRAVLIERADSALYLAKESGRNRCMSYQ 720 >UniRef50_Q2Y8W7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y8W7_NITMU Length = 360 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 10/204 (4%) Query: 91 LAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQ 150 L I + + +E L A + L R+ D LTG+ R L ES +H Sbjct: 161 LYIAAEGYHLPELNELEEKLDKLRAEASR-----LQERTWTDELTGVMNYRKLMESLEHH 215 Query: 151 LRNAEPL-----NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRY 205 ++ AE +L L++ D+D FK +NDTYGH++GD+VL+ LA + S TRD++ + R+ Sbjct: 216 VQRAERRGQERSSLCLIMSDLDFFKKINDTYGHMVGDLVLQHLARRIKSATRDFDMIGRF 275 Query: 206 GGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVV 265 GGEEF++I+ + E A RI V + + +I++T++ GV+ P E + + Sbjct: 276 GGEEFVVIMADTDLELAKVIAERIRLGVMSTPFHIKKFNIHVTISLGVAMLKPGESRESL 335 Query: 266 IGRADRAMYEGKQTGRNRCMFIDE 289 + RAD AMYE K+ GRN + E Sbjct: 336 LERADAAMYEAKRRGRNCVVTTKE 359 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 61/173 (35%), Positives = 93/173 (53%), Gaps = 5/173 (2%) Query: 123 YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLI 180 + + D LTG R L + + ++ ++ L L++ DID FK +NDTYGH I Sbjct: 179 EKIKKLATTDPLTGAFNRYQLFKKLEEEIERSKRYGNHLSLIMFDIDNFKSINDTYGHNI 238 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VL+ + + R +T+ R+GGEEF+II NDE A +I +LV + + Sbjct: 239 GDQVLKITIDTIKNHIRKTDTLGRFGGEEFMIICPGINDEGARNIAEKIRKLVKDIKV-- 296 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVI 293 EG IT++ GV+ FP+E + I +AD A+Y K+ G+NR +NV Sbjct: 297 -EGIPEITISVGVAEYFPDESITDFIKKADIALYSAKKKGKNRVEIYSSENVC 348 >UniRef50_C5UZW0 Diguanylate cyclase n=2 Tax=Gallionellaceae RepID=C5UZW0_9PROT Length = 599 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 4/235 (1%) Query: 58 IDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAAL 117 ++++ ++ + + ++ + ++ + S + Sbjct: 365 YHQKISGYSEKIAQSSNLNDLGHLLDDIMQDTRVIQASALKSHEELLDSRKQVESAEEKI 424 Query: 118 TDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVN 173 + + L ++ + D LTG RR LD +FD + R + +L + LLDID FK +N Sbjct: 425 SKLEKELSEVSELVHQDQLTGALNRRGLDAAFDRESRRVDRSHESLCIALLDIDNFKRLN 484 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 DT GH +GD L L + R ++V RYGGEEF++I+ EA R+ + + Sbjct: 485 DTMGHQVGDKALIHLCHVIKEALRPSDSVARYGGEEFVLILPDVTLAEAALTVERLQREL 544 Query: 234 DNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 H I +T +AGV++ P E + +IGRAD+AMY+ KQTG+NR + + Sbjct: 545 TKQFFMHENDRILVTFSAGVAQLAPNESQEELIGRADKAMYQAKQTGKNRVVVAN 599 >UniRef50_D2C2R9 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech586 RepID=D2C2R9_DICD5 Length = 501 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 2/168 (1%) Query: 123 YLLTIRSNMDVLTGLPGRRVLDESFD--HQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 L + + D LTGL R+ + F ++A+ ++L+D+D FK +ND YGH I Sbjct: 334 RRLELMATTDKLTGLMNRQAFEYIFRTLRMKQSAQQRTFSIILIDLDFFKKINDQYGHHI 393 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VL A + R ++ R+GGEEF++++ + +A R +I Q V ++H Sbjct: 394 GDRVLVKTARLIQRAIRKTDSACRWGGEEFVLLLGDCSLHQAHRVAEKIRQAVHFALVSH 453 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 IN+T++ GV+ + P E +D ++ RAD+A+Y+ K+ GR++ + + Sbjct: 454 RHQVINLTISCGVAESNPGESIDHLVQRADKALYQAKRQGRDQAVMAE 501 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 57/169 (33%), Positives = 82/169 (48%), Gaps = 6/169 (3%) Query: 122 IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHL 179 L + D LT L RR L E ++ A L L+++D+D FK VNDTYGHL Sbjct: 321 NARLEQLAQTDPLTQLLNRRALTERITAEMERALRYDSTLALLMIDLDHFKKVNDTYGHL 380 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 +GD VLR + L R + RYGGEEF++++ +D A RI ++ H Sbjct: 381 VGDDVLRDVGQLLGHTIRGSDITARYGGEEFLVLLPETDDAGAVAFAERIRVAMEEHPFA 440 Query: 240 HSE--GHINITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRC 284 + +T + GV+ E ++ + RAD A+Y K GRNR Sbjct: 441 RDSMAEPLKLTASIGVAVFPAARIENVEDLFARADAALYRAKAEGRNRV 489 >UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax=Pseudomonas fluorescens RepID=Q3KAB6_PSEPF Length = 559 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 66/217 (30%), Positives = 97/217 (44%), Gaps = 11/217 (5%) Query: 72 VRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNM 131 VR + Q + + L+ E +A +A + TAALT LL + + Sbjct: 337 VREIAQLGQSIDAMTQSLLAKERELQETNASLEA---TVAQRTAALTLANAELLNL-ATH 392 Query: 132 DVLTGLPGRRVLDESFDHQ--LRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTG+ RR DE L L+L+D D FK +NDT+GH GD VLR LA Sbjct: 393 DGLTGVYNRRRFDEKLTEYSLLFRRTGRPFALLLIDADHFKRINDTHGHAAGDDVLRQLA 452 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEA-CRAGVRICQLVDNHAITHSEGHINIT 248 + R + V RYGGEEF +++ + +I + +T Sbjct: 453 QLIQISIRSTDFVARYGGEEFAVLLPEIAKPDTPDIVAEKIRSAIAEADFPAVG---PVT 509 Query: 249 VTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRC 284 V+ GVS A P + ++ RAD+ +Y+ K GRN+ Sbjct: 510 VSIGVSLADPADNTPTTLVKRADQQLYKAKAAGRNQV 546 >UniRef50_Q30UV1 Diguanylate cyclase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30UV1_DESDG Length = 436 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 57/179 (31%), Positives = 98/179 (54%), Gaps = 3/179 (1%) Query: 110 LLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDID 167 ++ ++ + + + +L + D LTGL RR L + H + L L ++++D+D Sbjct: 241 MMGVSSMINERLVQMLEKEARTDPLTGLGNRRALYTAAAHHVARLHRLCEPLVILVMDLD 300 Query: 168 RFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGV 227 RFK VND +GH GD +LR A L R + ++R+GGEEF+ +++ +++ A Sbjct: 301 RFKSVNDKFGHPAGDALLRHFAAILQKQFRGTDQLFRFGGEEFVALLQPSDERGAVCLAE 360 Query: 228 RICQLVDNHAITHSEGHINITVTAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRNRCM 285 R+ + V + I +TV+ G++ PEEP + +GRAD+A+Y+ K GRNR Sbjct: 361 RLRREVAACPLQLGGASIAVTVSIGIANMLPEEPDITRALGRADQALYKAKAGGRNRVE 419 >UniRef50_Q31IH0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IH0_THICR Length = 349 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 11/266 (4%) Query: 25 WLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHN 84 W + HS+ + + S EI DN + + + + + E+ V + +A + + Sbjct: 83 WSEIISHSLHSEEFS--EIVDNLILYIDNWIKAAQNKSDTISAEVEKVSQLSTAQEMIDR 140 Query: 85 CGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRV 142 ++ AI + +A QE + +A + K L T + D LT +P RR Sbjct: 141 LKSNVLPAIASYQ---SETNALQEQIQDSSAEIMRLKKELDKATAIAKTDELTNIPNRRG 197 Query: 143 LDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYE 200 +E ++ ++ A + + L++LDID FK VNDTYGHL+GD +LR LA L + T+ + Sbjct: 198 FNEIIENMMKEANEKQSSFALLVLDIDFFKKVNDTYGHLVGDSILRYLAKSLHNETKGKD 257 Query: 201 TVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE--GHINITVTAGVSRAFP 258 ++ R GGEEF+ I+ + + + A + I + + + + I +T++ GV+ Sbjct: 258 SIARIGGEEFVAILPSTSYDSALKLANTIREKIASRPLHVKNNANPITLTISIGVAMFQL 317 Query: 259 EEPLDVVIGRADRAMYEGKQTGRNRC 284 E LD + RAD+ +Y K GRNR Sbjct: 318 NETLDSLFTRADKCLYMAKSNGRNRV 343 >UniRef50_UPI0001AF5018 diguanylate cyclase, putative n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF5018 Length = 692 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 10/227 (4%) Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 LDN + MD + + +E+ + A + ++ L F + L + Sbjct: 472 KQVLDNRLEGLLSTMDHYQRKRDDREQEVASRL---QSLSARVASMEQEALGFRSNLEEQ 528 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGH 178 + ++ +D LTGL R E + ++ + +L + +LD+D FK +ND YGH Sbjct: 529 R-----QKALIDPLTGLANRAAWGERLELEMTQWQQAKNSLLVCILDLDHFKRINDGYGH 583 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 L GD VL+ +A L R + + R+GGEEF++++ A + V+ Sbjct: 584 LAGDKVLKIVANVLKKRLRPNDFMARFGGEEFVMLLPATPIGTGLTLLDELRTAVEECPF 643 Query: 239 THSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + ITV+ GV+ E D I RAD+A+Y+ K+ GRNR Sbjct: 644 HFKGERVTITVSLGVTALRQGERSDTAIKRADQALYKAKENGRNRVE 690 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 5/176 (2%) Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGH 178 + L ++ D LTGL RR + + + + A L++ DID FK VND YGH Sbjct: 287 REQKLLEIAHSDPLTGLNNRRAAEHTLERLIDTARISGKPFSLIIGDIDHFKSVNDRYGH 346 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 GD VL ++A L R + R+GGEEF+I+V ++ + A RI + V++ I Sbjct: 347 PAGDRVLTSVAVILKQRIRLQDVAARWGGEEFLILVPDSSLDHAAELADRIRKGVEDLLI 406 Query: 239 THSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVIN 294 ++ ++T++ GV++ P E +I RAD+A+Y+ K+ GRNR + I Sbjct: 407 PNTG---SVTISLGVAQLSPGETAASLIQRADKALYQAKRRGRNRVDIAQADDTIY 459 >UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRA7_DESBD Length = 495 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 91/186 (48%), Gaps = 3/186 (1%) Query: 109 GLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDI 166 LL + + L + ++ D+LTG RR ES + L +++D+ Sbjct: 308 TLLVRGQIRLNRQSRELALAASTDMLTGALNRRAFMESASREFARVCRYGGHLSCIMIDL 367 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAG 226 D FK VNDTYGH GD+VL + A Y+AS R+ + RYGGEEF+I++ + A Sbjct: 368 DHFKNVNDTYGHAAGDLVLSSSAHYIASRLREPDMFCRYGGEEFVILLPGTDRNGAATVA 427 Query: 227 VRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCM 285 + + + + + +T + GV+ + LD ++ AD+A+YE K+ GRNR Sbjct: 428 EELRAGLAGLDLQRGDEKLPLTASFGVAEIHAQCATLDTLLSLADQALYEAKENGRNRVC 487 Query: 286 FIDEQN 291 Q Sbjct: 488 LAPRQQ 493 >UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NS82_9VIBR Length = 385 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 66/193 (34%), Positives = 97/193 (50%), Gaps = 10/193 (5%) Query: 101 AHFDAFQEGLL-------SFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRN 153 AH AF LL S T LT + + S D LT L RR L+E ++ Sbjct: 190 AHQLAFVSTLLMVIFIGFSVTWMLTGRLVATIYDTSIKDELTQLYNRRALEELLPKEIAR 249 Query: 154 AEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFI 211 + L ++LLDID FK VNDTYGH GD VLRT L TR + +RYGGEEF+ Sbjct: 250 SSRHKQPLSVLLLDIDHFKKVNDTYGHQAGDRVLRTTGKLLILQTRKDDLSFRYGGEEFL 309 Query: 212 IIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADR 271 +++ + E+A ++ + + + + + T + GV++ E+ I RAD+ Sbjct: 310 VLLPNTDVEKAVIVAEKLREAIKRARMLPTNVD-SCTASFGVTQFNGEDDWQTAIERADQ 368 Query: 272 AMYEGKQTGRNRC 284 A+Y K+ GRN+ Sbjct: 369 ALYSAKENGRNQV 381 >UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLJ7_DESAH Length = 576 Score = 230 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 65/184 (35%), Positives = 94/184 (51%), Gaps = 8/184 (4%) Query: 108 EGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLD 165 E LL T + L D LT + RR DE D + + + L L++ D Sbjct: 383 EKLLKETQKRLETANQKLQTLVTSDGLTMIANRRKFDEYLDQEWQRCKRAKVWLSLLMCD 442 Query: 166 IDRFKLVNDTYGHLIGDVVLRTLATYL-ASWTRDYETVYRYGGEEFIIIVKAANDEEACR 224 ID FK NDTYGH GD LR +A + + R + V RYGGEEF +I+ AC Sbjct: 443 IDYFKHYNDTYGHQAGDDCLRKIAQAMEKTVVRPMDLVARYGGEEFAVILSDTGLNGACH 502 Query: 225 AGVRICQLVDNHAITHSEGHI--NITVTAGVSRAFPEE---PLDVVIGRADRAMYEGKQT 279 RI + V N I HSE + ++T++ G++ P++ +D++I AD A+Y+ K+ Sbjct: 503 VARRIQEDVKNLNIAHSESSVSTHVTLSIGITCLIPDDEDLSMDLLIKTADEALYKAKRK 562 Query: 280 GRNR 283 GRNR Sbjct: 563 GRNR 566 >UniRef50_A5UZW7 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5UZW7_ROSS1 Length = 797 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 6/196 (3%) Query: 95 ENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIR-SNMDVLTGLPGRRVLDESFDHQLRN 153 +H+ + + A+T+ +++ T R + D LTGL R +L Sbjct: 594 HSHFSERDGAMLEIVGRQTGIAITNAQLFTETQRLATTDQLTGLFNRYHFFALAPRELER 653 Query: 154 AEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFI 211 A ++ L+++D+D FK +NDTYGH+ GD VL+ +A ++ RD + + R+GGEEFI Sbjct: 654 ARRYRHDVALLIIDVDHFKTINDTYGHVAGDTVLQHIADHMRRELRDADILARFGGEEFI 713 Query: 212 IIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFP---EEPLDVVIGR 268 ++ N A R R+ ++ + + + I T++ G + P +E LD +I R Sbjct: 714 ALLPETNLTGALRVAGRLRATIEANPVPLNGQSIRATISVGCASLHPATRDEHLDTLIQR 773 Query: 269 ADRAMYEGKQTGRNRC 284 ADRA+Y K GRN+ Sbjct: 774 ADRALYTAKAGGRNQV 789 >UniRef50_A4VQF4 GGDEF domain protein n=3 Tax=Proteobacteria RepID=A4VQF4_PSEU5 Length = 466 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 5/176 (2%) Query: 113 FTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFK 170 F L I+S D LTGL R LD F L A L +++LDID FK Sbjct: 286 FWIRRLRRLNDQLRIKSQTDSLTGLANRAALDRRFATALEQARRYRRPLSIVMLDIDHFK 345 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 +ND +GH +GD VLR A L R + V R+GGEEF+++ + +A + R+C Sbjct: 346 RINDDFGHQMGDRVLRDFAALLDDCLRGSDAVGRWGGEEFLVLCPETSGPQAVQFAERLC 405 Query: 231 QLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + T++AGV+ P + D ++ RAD A+Y K GR+R + Sbjct: 406 EQARAFPFATGVSQ---TLSAGVAELSPSDTPDSLLRRADAALYRAKHEGRDRVCW 458 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 7/225 (3%) Query: 69 LPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY--KIYLLT 126 L R + + + E L H+ F + A +T+ L Sbjct: 271 LDLYRRVAAGELGPQSLEHERRLESKTKHYDLRVFRTGPGTISVEFADITERTRMQEELR 330 Query: 127 IRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVV 184 S D LT L RR L + +L L LMLLDID FK +NDT+GH GD+V Sbjct: 331 EASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLLDIDHFKRINDTFGHDSGDLV 390 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 L +A +++ R + + RYGGEEF+I + + A +I + + Sbjct: 391 LTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAVLAEKIRSSIAMFSFPTVGA- 449 Query: 245 INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 +T++ G+S ++ ++ +I RAD A+Y K+ GRNR + E Sbjct: 450 --VTISVGISLLESKDDINALIKRADTALYAAKEMGRNRVVRSTE 492 >UniRef50_C4XNA6 Response regulator receiver protein n=2 Tax=Desulfovibrio RepID=C4XNA6_DESMR Length = 430 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 8/187 (4%) Query: 103 FDAFQEGLLSFT--AALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--N 158 F +++FT L + + +L IR+ D LTG+ R L E+ + + ++ + Sbjct: 246 FPELDRTIITFTDITPLAEER-RILRIRAATDALTGIANRAGLAEALEREFHRSQRHPAS 304 Query: 159 LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAN 218 L +++ DID FK VND YGH GD VL L + + RD++T RYGGEEF+II + Sbjct: 305 LSVIIFDIDHFKNVNDAYGHPAGDAVLAELTRLVTTHVRDHDTFGRYGGEEFLIIAPGTD 364 Query: 219 DEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQ 278 EA + R+ V H ++T + GV+ A P++ D ++ RAD A+Y+ KQ Sbjct: 365 VAEAAKLAERLRSDVARHGFPAVG---SLTCSFGVAVAGPDDTPDSLVARADTALYDAKQ 421 Query: 279 TGRNRCM 285 +GR+R + Sbjct: 422 SGRDRVV 428 >UniRef50_A4BD76 GGDEF domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BD76_9GAMM Length = 476 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 128/289 (44%), Gaps = 19/289 (6%) Query: 15 LNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRL 74 LN + Q + A+ +I + S L + N ++ R Sbjct: 183 LNDRLQEEKQQFEGYLSELNAKLTRIQQIVEADSTTLAELKELHASFNDSINAQMHEARE 242 Query: 75 MDSAHQHMHNCGRELMLAIVENHWQ--------DAHFDAFQEGLLSFTAALTDYK----- 121 H + EL+ ++ + ++ Q+ TA + D + Sbjct: 243 KIDRHYQVETLKSELLTSLDSIASRLEAYQSSYESKLQTLQKSKAEMTAHVIDLEKENRN 302 Query: 122 ----IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDT 175 ++ S +D LTGLP R+ D +L AE + L + ++DID FK +ND Sbjct: 303 LLTELHKERQLSMLDPLTGLPNRQGFDRRLSAELARAERYDQALSIAIIDIDFFKRINDE 362 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 +GHL+GD VL+ +A + R+ + + R+GGEEF++++ EE A ++ + V+ Sbjct: 363 FGHLVGDKVLKMMAKEMKRVCRESDFLSRFGGEEFVLLLPQTTLEEGLTAVDKLRRHVET 422 Query: 236 HAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + +N+TV+AGV++ E L+ + RAD A+Y K+ GRNR Sbjct: 423 RPFHYQNTPVNLTVSAGVAQRQVNETLESWLDRADAALYVSKREGRNRV 471 >UniRef50_A6VEW2 Ggdef domain protein n=8 Tax=Pseudomonas RepID=A6VEW2_PSEA7 Length = 668 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 7/234 (2%) Query: 58 IDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAAL 117 + LD+ +L ++ M RE A E + S Sbjct: 438 VQQATDLDSLKLAVDSRLNGLLASMDEHQRE---QAEHEQEVSGRLQALMERVNSMEQDA 494 Query: 118 TDYKIYLLTIR--SNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVN 173 + +L R + D LTGLP R L E + ++ L L +LDID FK +N Sbjct: 495 KAFHTHLEDQRQKALTDPLTGLPNRAALSERLEQEVARRRRDGGELLLAVLDIDHFKRIN 554 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 D +GHL GD VL+ +A L R + + R+GGEEF++++ A + + R+ + Sbjct: 555 DDFGHLAGDKVLKIIAGELRKRLRQADFIARFGGEEFVVLLPATPLDAGRQLLERLRAAI 614 Query: 234 DNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 ++IT +AG++ E + RAD+A+Y K+ GR+R Sbjct: 615 AACPFHFKGEPLSITCSAGITAFVGNEAGEAAFERADQALYRAKRAGRDRLEVA 668 >UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U4U5_MARAV Length = 571 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 4/172 (2%) Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTYGH 178 K L +++ D LT L RR ++ L A L ++ +DID FK VNDT+GH Sbjct: 391 KQDELKRQASTDPLTRLFNRRYFMAEGEYVLEQARTSGEPLSVIAIDIDHFKAVNDTHGH 450 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 +GD+VL +A+ ++RD + V R+GGEEF+I++ A+ E RI V+ I Sbjct: 451 NVGDLVLVEVASVFRQFSRDRDLVARFGGEEFVILLPGADLTEGFGCAERIRNAVEAMVI 510 Query: 239 THSEG-HINITVTAGVSRAFP-EEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 +G + +TV+ GV+ P E ++ + RADR++YE K GRNR D Sbjct: 511 DGGDGLAVRVTVSVGVAEVNPLLESVEGAVKRADRSLYEAKAGGRNRVCGFD 562 >UniRef50_Q39S35 Diguanylate cyclase with GAF sensor n=2 Tax=Geobacter RepID=Q39S35_GEOMG Length = 686 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 5/187 (2%) Query: 111 LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDR 168 + AL+ + L S D LTGL RR L + +L + + L+L +ML+D+D Sbjct: 485 IMIERALSIERADFLEQLSITDPLTGLYNRRFLKRRMEEELARSIRQNLSLTVMLIDLDN 544 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK+ ND GHL GD L+ +A L+ R + V RYGGEEF II+ + +E+ R Sbjct: 545 FKIYNDLCGHLAGDRALKKMARILSDTARQMDVVTRYGGEEFCIILPGTSKKESLFVAER 604 Query: 229 ICQLVDNHAITHSEG--HINITVTAGVSRAFPEEPLDV-VIGRADRAMYEGKQTGRNRCM 285 I + ++ +H E +T + GVS + ++ ++ AD A+Y K GRNR + Sbjct: 605 IRREIEGEEFSHEENLPQGRLTASIGVSSFPEDGNVEAVLVKAADVALYRAKSEGRNRVV 664 Query: 286 FIDEQNV 292 Sbjct: 665 ISGPPPA 671 >UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C2A6_ACAM1 Length = 420 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 9/228 (3%) Query: 67 DELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDA--FQEGLLSFTAALTDYKIYL 124 E + L + + ++ + +N + A + + L T D Sbjct: 187 LEDAKLSLENKVKERTQALQQQTLALAAKNKQLEEEIQAKLYAQQALEATNKKLDEANKQ 246 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGD 182 L++ +N D LTGL RR DE + + L L++ DID FK NDTYGHL GD Sbjct: 247 LSLIANHDALTGLANRRRFDEYLQQIWKQTQREQQPLSLLICDIDFFKQYNDTYGHLEGD 306 Query: 183 VVLRTLATYLASW-TRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 + LRT+A + R + V R+GGEEF I++ + E R+ ++ + H Sbjct: 307 ICLRTVAQKIHQTIVRPLDLVARFGGEEFAIVLPNTDLEGGQVVAERLRMIIQKSQLPHR 366 Query: 242 EGHIN--ITVTAGVSRA--FPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 ++ +TV+ G + P + +I RAD+A+Y+ KQ+GR++ + Sbjct: 367 GSSVSEFVTVSIGAATVRSHPHTSVSSLISRADQALYQAKQSGRDQVV 414 >UniRef50_Q5SHT9 GGDEF domain protein n=2 Tax=Thermus thermophilus RepID=Q5SHT9_THET8 Length = 360 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 13/267 (4%) Query: 29 MFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRE 88 + + + + + GL W+ P R A ++ Sbjct: 93 LIALYLLSTLTYQLLFKPNPLGLSPAAYWVPFFYFSSYLFFPAKRAARLALLYLLTLFPV 152 Query: 89 LMLAIVENHWQDAHFDAFQE------GLLSFTAALTDYKIYLLTIR--SNMDVLTGLPGR 140 +L ++ N +Q H++A + + L K + + + D LTGL R Sbjct: 153 ALLGLMRNPFQPVHWNALTQFFGANLAYVGLLYLLVRLKEGYMEAQLDAYTDFLTGLRNR 212 Query: 141 RVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRD 198 R L+ + +L + L L+LLD+D FK VND +GH +GD VL+ LA + + R Sbjct: 213 RYLELILERELFRLQRYGRPLSLVLLDLDGFKAVNDLHGHEVGDRVLQALAQRIEAHLRR 272 Query: 199 YETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFP 258 + R GGEEF +++ +A R R+ + V+ A+ IT + GV+ A P Sbjct: 273 SDRAVRLGGEEFALLLPETPLPQALRLAERLRRAVEAMAVPPVA---RITASFGVAEARP 329 Query: 259 EEPLDVVIGRADRAMYEGKQTGRNRCM 285 + ++ RAD AMY K+ G+NR Sbjct: 330 TDTPLTLLRRADEAMYRAKRKGKNRVE 356 >UniRef50_A8UT68 Putative uncharacterized protein n=2 Tax=Aquificaceae RepID=A8UT68_9AQUI Length = 620 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 6/196 (3%) Query: 101 AHFDAFQEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRN--AEP 156 + +G L + + + K + LL +S +D LTGL RR LDE D Sbjct: 418 RMLIPYIKGYLQEASPVLESKSLMELLQQQSYIDQLTGLYNRRFLDEIADKLSAQVKRRG 477 Query: 157 LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKA 216 +L ++++DID FK +ND YGH +GD VL+ +A+ + S R+ + V R+GGEE ++++ Sbjct: 478 TSLGILMIDIDYFKQINDKYGHDVGDRVLKEIASIIKSSVREADYVIRFGGEEILVLLVD 537 Query: 217 ANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLD--VVIGRADRAMY 274 + A + +I + ++N I S G I TV+ GVS + I AD A+Y Sbjct: 538 VREGTAKKVAEKIRRAIENKVIEISGGVIKKTVSIGVSEFPKDCDGKFWQCIKFADVALY 597 Query: 275 EGKQTGRNRCMFIDEQ 290 K+ GRNR + + Sbjct: 598 RAKEEGRNRVVRFTPE 613 >UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV3_9DELT Length = 519 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 6/173 (3%) Query: 116 ALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVN 173 + + + + D LTGL RR E D +L P L L++ DID FK VN Sbjct: 338 EVVERLLREKDQLAGTDQLTGLNNRRRFKELLDQELIRYRRIPKPLSLLIFDIDHFKRVN 397 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 DTYGH GD+VL+ +A L + R +T R+GGEEF++++ A E A ++ Q + Sbjct: 398 DTYGHETGDLVLKEMAQLLQATVRRTDTPARWGGEEFLVLLPATTAEAAMALAEKLRQAI 457 Query: 234 DNHAITHSEGHINITVTAGVSRAFPEEPLDV-VIGRADRAMYEGKQTGRNRCM 285 + H +T + GV+ E + ++ R D+A+Y+ K+ GRNR + Sbjct: 458 EEHDFPRVG---RVTASFGVAAFHDGEQEESALLRRVDKALYQAKRQGRNRVV 507 >UniRef50_A0YNV2 Regulatory component of sensory transduction system n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YNV2_9CYAN Length = 456 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 16/243 (6%) Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVE-NHWQDAHFDAFQEGLLSFTAALTD 119 G LD + + H R+L E W + +G+L +T+ Sbjct: 211 KGSLDIFDSSLFEYFIKVVKTRHPFERDLYYETPEITAWYSVKAIPYGQGILIIVRDITE 270 Query: 120 YK---------IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDR 168 K +L ++ D LT + RR D + + A+ L+L LM++DID Sbjct: 271 RKQCELVLHETNSILYQQAITDNLTKISNRRAFDVYLKQEWKRAKREALSLALMMIDIDY 330 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGV 227 FK ND YGH GD L T+A + R + V RYGGEEF +I+ E A Sbjct: 331 FKRYNDHYGHEAGDRCLYTVAQTIRQAVKRPSDFVARYGGEEFAVILPNTEREGAETVAD 390 Query: 228 RICQLVDNHAITHSEGHIN--ITVTAGVSRAFP-EEPLDVVIGRADRAMYEGKQTGRNRC 284 I + + + + H++ I+ IT++ G+S P E ++I AD A+YE K GR+R Sbjct: 391 SIQKAIHDFKLPHAQSPISSCITLSIGISIQIPTSEDFTILIQTADHALYEAKHQGRDRI 450 Query: 285 MFI 287 Sbjct: 451 QVY 453 >UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q525_NITSB Length = 350 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 16/263 (6%) Query: 26 LVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNC 85 L S+ S+ + + D H+ L + + ++ + Q++ Sbjct: 99 LKSIASSIEEKLSQIISTIDTHNDTLQDKTEALQEKEH-QAADPEILKYLKEILQNLEEL 157 Query: 86 GRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDE 145 +EN + + E + L D K ++ D LT L RR +E Sbjct: 158 R-------MENSQLNEQLKKYYEEINHLRRELRDTKN-----KAEFDYLTELFNRRKFEE 205 Query: 146 SFDH---QLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETV 202 F + E L++LDID FK +NDTYGHL+GD VL+ L++ + ++ Sbjct: 206 YFHKLLKEFNEGEGKPFSLIILDIDDFKQINDTYGHLLGDEVLKNLSSLIKTFLHSAHIP 265 Query: 203 YRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPL 262 R GGEEF I++ +EA R+ + V+N I +EG +N TV+ GV++ + + Sbjct: 266 ARIGGEEFAILLPETPLDEAKTIAERLRKTVENRTIPIAEGDLNFTVSIGVAQVQKGDTM 325 Query: 263 DVVIGRADRAMYEGKQTGRNRCM 285 D ++ RAD A+YE K+ G+N + Sbjct: 326 DSLLKRADEALYEAKRNGKNMVI 348 >UniRef50_A8TN49 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN49_9PROT Length = 305 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 77/290 (26%), Positives = 128/290 (44%), Gaps = 4/290 (1%) Query: 6 TEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLD 65 T D I+ + +A L S +A+ ++ + G W Sbjct: 11 TRYDRIVSAIEQARAEASDRLTRFHRSAIAKVRPDADLLKLAGHESSTLGVWYAERKDAQ 70 Query: 66 NDELPYVRLMDSAHQHMHNCGRELM-LAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL 124 + P + + H+ + N L A + +DA E + +F Sbjct: 71 PLDQPAFETLVALHEALLNHIALLAGRAWKDAKVPVEEYDALLEKVQAFDELAGRLVRAF 130 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGD 182 S++D LTG R+V+ +++ A L + DIDRFK +ND +GH +GD Sbjct: 131 QAAISDLDPLTGAQTRQVMLRDLKREVQRARRSGTPGCLAIADIDRFKSINDGHGHAVGD 190 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 VL ++ L R Y++VYRYGGEEF++ + EEA R R+ + + H + Sbjct: 191 SVLAAVSGLLIESLRPYDSVYRYGGEEFLLCLPETGPEEARRVLDRVRERIAGHPVMIDG 250 Query: 243 GH-INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 G + +T++ G++ P PL+ +I RADRA+Y K++GRNR + Sbjct: 251 GKNLVVTISFGLTLMTPRRPLEELIDRADRALYLAKESGRNRVEVWRPET 300 >UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFS2_CARHZ Length = 543 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 123/290 (42%), Gaps = 12/290 (4%) Query: 6 TEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLD 65 E+ I + + L + D + + H+ L + G + Sbjct: 257 QELKNTFSYHTGVIYTYSESLRKYIPRYLNTDFPELPGPEFHNTLLSEMG----NRKTAA 312 Query: 66 NDELPYVRLMDS--AHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIY 123 + P + + G +++A ++ + + A+ + +Y Sbjct: 313 LIKHPQLGSIAVVPLQNRRDVFGYLVIVAPKGQNYSHSQLRRLENISGQVALAVYNGYLY 372 Query: 124 L-LTIRSNMDVLTGLPGRRVLDESF--DHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 L L + D LTGL RR E +H LN ++LLDID FK +NDTYGH Sbjct: 373 LRLKELAQKDELTGLYNRRYFLERLNEEHLRSRRHKLNYTIVLLDIDYFKKINDTYGHDC 432 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD+VL +L R + RYGGEEF++++ +EA R+ + V + Sbjct: 433 GDLVLNDFGRFLKDTLRRTDLSARYGGEEFVVLLPQTGKKEAYLLAERLREKVKERVLIF 492 Query: 241 SEGHINITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNRCMFID 288 + TV+ G++ A+PE+ + ++ AD+A+Y+ K GR++ + ++ Sbjct: 493 QGQKVKYTVSMGLA-AYPEDAEEYRELLSLADKALYQAKNRGRDKVVMVN 541 >UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepID=Q2W5X6_MAGSA Length = 317 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 5/178 (2%) Query: 111 LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDR 168 LS A+ K L S D LTGL RR LDESF H+L A+ + L++ D+D Sbjct: 143 LSEAYAMLALKSVELEKASITDALTGLFNRRRLDESFAHELDRAQRYAEPVSLIISDVDH 202 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK VND +GH +GD VL+ +A L R + V R+GGEEF+II + + A + Sbjct: 203 FKSVNDIHGHHVGDEVLQAMAGLLRHGVRALDVVGRWGGEEFLIICPNTDLDGATALAEK 262 Query: 229 ICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + + + + + GV++ E + RAD A+Y K GRNR + Sbjct: 263 LRAAIASAQFPGIGTS---SASFGVAQYQDGESFKDTVARADTALYRAKVNGRNRIEY 317 >UniRef50_Q04S93 GGDEF domain receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04S93_LEPBJ Length = 330 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 95/192 (49%), Gaps = 8/192 (4%) Query: 105 AFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLM 162 ++ L T L + YL+ I S D LTGL RR E + + + L+ Sbjct: 138 EREKELEKLTDQLQEVNSYLVAI-SRTDSLTGLYNRRYFYEILTTEWKRCWRTGAGIALI 196 Query: 163 LLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRD-YETVYRYGGEEFIIIVKAANDEE 221 +LDID FKL NDTYGH GD L+ +A + R + RYGGEEF +I+ N+ Sbjct: 197 MLDIDHFKLYNDTYGHQGGDQCLKQVARAIRDCARRAGDVAARYGGEEFAVILPETNESN 256 Query: 222 ACRAGVRICQLVDNHAITHSEGHIN--ITVTAGVSRA--FPEEPLDVVIGRADRAMYEGK 277 A I + V+ AI HS N +TV+ G++ PE + +I RAD+A+Y K Sbjct: 257 AVVVSRNILENVEKMAIPHSASKTNSIVTVSIGMATLSPSPENSITELIERADKALYLAK 316 Query: 278 QTGRNRCMFIDE 289 + GRN F + Sbjct: 317 EEGRNCLRFYPQ 328 >UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXI5_MARAV Length = 523 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 4/166 (2%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESF--DHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIG 181 L S D LTGL RR DE F + ++ L L++ DID FKL ND +GH G Sbjct: 354 ELQRFSYEDSLTGLKNRRYFDELFRHEREVSARSDRPLCLLIFDIDHFKLFNDCHGHEAG 413 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D LR + LA+ R +TV RYGGEEF +++ A+ +EA + ++ + + H Sbjct: 414 DQALRMVGDVLATCFRGSDTVCRYGGEEFSVLMPGASLDEARQRAEQLRAAISAEPVEHR 473 Query: 242 EGHI-NITVTAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRNRCM 285 ++ ++T++AG++ P D + AD+A+Y+ K+TGRNR + Sbjct: 474 GENLGSLTISAGIACWRENCPEFDELFRAADQALYQAKETGRNRVV 519 >UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7F5_MAGSM Length = 320 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 5/175 (2%) Query: 119 DYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAE--PLNLYLMLLDIDRFKLVNDTY 176 + L + +D LTG+ RR DES Q+R E L L++LD+D FK NDT+ Sbjct: 146 SERQRKLETFAKVDPLTGIYNRRWFDESMQRQMRRVEHSQNPLSLIMLDVDHFKRYNDTH 205 Query: 177 GHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNH 236 GH GD L LA ++ R + RYGGEEF +++ + R+ V+ Sbjct: 206 GHQGGDEALIALAHTISLHLRPGDIAARYGGEEFAVVLPDTDAVSGRMIAERLRTAVEAL 265 Query: 237 AITHSEGH--INITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCMFID 288 I EG+ IT++ GV++ + + +I AD A+Y+ K GRNR + D Sbjct: 266 EIKDDEGNSLSGITISLGVAQTSGTVDSVSELIATADAALYQAKNQGRNRVVVGD 320 >UniRef50_Q2SD41 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SD41_HAHCH Length = 313 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 5/205 (2%) Query: 97 HWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNM-DVLTGLPGRRVLDESFDHQLRNAE 155 + D+ + L S L + Y + + + D LTG+ +R D ++ A Sbjct: 107 RFTDSEIHVIETLLGSLIYPLRNGLRYQEAMNAALSDSLTGVANKRAFDYQLHREVSLAT 166 Query: 156 PLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIII 213 L ++ DID FK VNDTYGH GD +L+ LA + RD + +R+GGEEF ++ Sbjct: 167 RYKYKLSMLFFDIDHFKKVNDTYGHAAGDALLQQLAKVVQDNCRDSDLCFRFGGEEFAML 226 Query: 214 VKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAM 273 + E A R+ + V N A H I+ T++ GV+ EE + RAD+A+ Sbjct: 227 LAKTETEGAYAIAERLREAVANTAFQHEGHTISFTISIGVATYDGEENRSDFLERADQAL 286 Query: 274 YEGKQTGRNRCMFI--DEQNVINRV 296 Y+ K GRN+ D++ + + Sbjct: 287 YDAKHAGRNKTKIAHQDQEEALTQA 311 >UniRef50_B1Y766 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y766_LEPCP Length = 381 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 3/166 (1%) Query: 122 IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHL 179 + + + D LTGLP RR + + + ++ + +LDID FK +ND YGH Sbjct: 208 LLRVEQLAERDELTGLPNRRRMQAALAEERERCSRNGVSFSVAMLDIDHFKRINDLYGHP 267 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKA-ANDEEACRAGVRICQLVDNHAI 238 +GD VLR++A + + R + V R GGEEF++I+ A EEA R+ ++ + Sbjct: 268 MGDAVLRSVAQLMRTALRKPDLVGRVGGEEFLMILPGAARLEEAKHVVERVRAAIEGNDW 327 Query: 239 THSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + + + +T + GV+ P E ++ + RADR +Y KQ GRN+ Sbjct: 328 SATRADLQVTASIGVAVGEPGESVESLFDRADRGLYLAKQGGRNQV 373 >UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZM04_9GAMM Length = 291 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 15/191 (7%) Query: 110 LLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDID 167 LL++++ + +I L S D LTGL RR +D D ++ + L +++LDID Sbjct: 89 LLTYSSVESIRRITRLEHESITDPLTGLFNRRHMDRRLDEEVARSRRYGQPLSVVMLDID 148 Query: 168 RFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGV 227 FK +ND GHL GD +L ++A L R + R+GGEEF++I + + A + Sbjct: 149 EFKGINDRLGHLAGDYILESIAQRLRQNLRRVDLAARFGGEEFVVIAPHTDQDAALQLAE 208 Query: 228 RICQLVDNHAITHSEG---------HINITVTAGVSRAFPE----EPLDVVIGRADRAMY 274 ++ + I + +TV+ GV+ E + D ++ RAD A+Y Sbjct: 209 KLRSEIAQTPIILKGHEHVPPCAPDELYVTVSVGVASLNIEPDSRDNADFLLQRADDALY 268 Query: 275 EGKQTGRNRCM 285 K GRNRC Sbjct: 269 RAKAGGRNRCE 279 >UniRef50_Q2RNW0 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNW0_RHORT Length = 360 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 4/180 (2%) Query: 109 GLLSFTAALTDYKI-YLLTIRSNMDVLTGLPGRRVLDESFDHQL--RNAEPLNLYLMLLD 165 +L++ T K L + D LTGL RR L ++F + R+ P L L++LD Sbjct: 177 TVLAYFYEGTRAKAARQLETLAKSDPLTGLANRRGLLDAFGGAVLTRSRAPHRLSLLVLD 236 Query: 166 IDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRA 225 +D FK +ND YGH GD VL +A + R + + R GGEEF +++ + A Sbjct: 237 LDHFKSINDRYGHEAGDGVLCHVAHVIKGMIRANDLIARIGGEEFALLLPDTDLAGAREV 296 Query: 226 GVRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRC 284 +I + +++ A+ G +++TV+ GV+ P+ + AD +Y+ K+ GRNR Sbjct: 297 AEKIRKAIESTALIGPGGSLSVTVSIGVAELDPQYPDFAALFSSADHRLYQAKKAGRNRV 356 >UniRef50_A8UWP4 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWP4_9AQUI Length = 425 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 7/197 (3%) Query: 99 QDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL- 157 + A D LL+F TD L S +D LTG+ R D+ F + R A Sbjct: 221 RHARKDFLLTMLLAFEKRKTDELNVRLRDISFIDGLTGVANRLRFDDFFRKEWRRARRTK 280 Query: 158 -NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTR-DYETVYRYGGEEFIIIVK 215 + +++LDID FK ND GHL GD L+ +A + S R D + V RYGGEEF++++ Sbjct: 281 RPISILMLDIDFFKNYNDLLGHLEGDECLKNVAKTIQSHIRADVDLVARYGGEEFVVVLP 340 Query: 216 AANDEEACRAGVRICQLVDNHAITHSEGHIN--ITVTAGVSRAFPEEPL--DVVIGRADR 271 + + A + RI + ++ I H ++ +TV+ GV+ P + L +V++ AD+ Sbjct: 341 ETDLKGALKVAERIRRDIEGLKIAHPGSQVSKFVTVSIGVASIVPIDNLKKEVLLNMADK 400 Query: 272 AMYEGKQTGRNRCMFID 288 A+Y K+ GRNR Sbjct: 401 ALYVAKKRGRNRVEAYS 417 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 5/164 (3%) Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDV 183 + +D LTGL R E + +++ + L ++L DID FK +NDTYGH IGDV Sbjct: 325 EEMATVDKLTGLFNRHKFQEIAEIEIKRSHRHKRPLSVILFDIDHFKKINDTYGHDIGDV 384 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VLR LA + R Y+ R+GGEEF+I+ ++++A ++ + V++H Sbjct: 385 VLRELAKIIKQNIRKYDYAIRWGGEEFLILTPETDEKQAFAMAEKLRKAVESHTFPEVG- 443 Query: 244 HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 +T++ GV+ P E +D I +AD A+Y K GRN+ Sbjct: 444 --KVTISLGVASVDPNESIDQAIKKADNALYGSKLGGRNKTTVA 485 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 6/200 (3%) Query: 93 IVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLR 152 I E +A + + L + ++ L ++ D LTG RR LDE+ + +L Sbjct: 520 ISERRRSEAELRSANDKLRKQLEEIEKLQVA-LREQAIRDSLTGCFNRRYLDETLERELS 578 Query: 153 NAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEF 210 + L L++LD+D FK +NDTYGH+ GD L LA L + R + + RYGGEEF Sbjct: 579 RSRREGYPLSLLILDLDHFKRINDTYGHMAGDQALIVLAETLRAGIRHEDVLCRYGGEEF 638 Query: 211 IIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEP--LDVVIGR 268 +I++ A + +T ++ T +AGV+ A+P+ D + Sbjct: 639 VILMPRMPLAIAAERAELWRSKIAEIRVTFGNFELSFTASAGVA-AYPDHGKMPDELTQA 697 Query: 269 ADRAMYEGKQTGRNRCMFID 288 AD+A+Y K GRNR + Sbjct: 698 ADQALYTAKNEGRNRVVVYS 717 >UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n=3 Tax=Zymomonas mobilis RepID=Q5NP17_ZYMMO Length = 1008 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 3/203 (1%) Query: 84 NCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVL 143 ++L + + + + T L + + L +N D LTGL RR Sbjct: 805 KIALIIILVLFLYDLISNQIRKLRLMITNKTLELQETNLR-LKELANTDELTGLLNRRAF 863 Query: 144 DESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYET 201 E F+ + +LDID FK +ND GHL GD V++ +A + R + Sbjct: 864 TEMFEKNCAQFSKTKDQFSVFILDIDFFKKINDNEGHLAGDAVIQYIAQKITENIRQQDF 923 Query: 202 VYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEP 261 RYGGEEF+I++ A+ E C+ RI + + + I +TV+ GV+ + Sbjct: 924 AARYGGEEFVIMLPNADMETTCQVASRIGNAISEKPVPYQGREIPVTVSIGVAVMKENDD 983 Query: 262 LDVVIGRADRAMYEGKQTGRNRC 284 + ++ RAD +Y K GRNR Sbjct: 984 ANSLLERADERLYMAKNQGRNRV 1006 >UniRef50_Q2T680 GGDEF domain protein n=32 Tax=Burkholderia RepID=Q2T680_BURTA Length = 506 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 8/169 (4%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGD 182 L + D LTGL RR LDE+ + + R A L ++ +DID FK NDTYGH +GD Sbjct: 333 LARLAGTDSLTGLHNRRALDETLEREWRRAVGGERPLAILFVDIDHFKRYNDTYGHQVGD 392 Query: 183 VVLRTLATYL-ASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 VL T++ + R + V RYGGEEF++++ A R+ V I H Sbjct: 393 EVLATVSRCIAQQAARLGDVVARYGGEEFVVVLPDTPRGGALVVAERVRLGVRMLGIEHE 452 Query: 242 EGHIN-ITVTAGVSRAFPEEP----LDVVIGRADRAMYEGKQTGRNRCM 285 + +TV+ GV+ P+ + ++ AD+A+Y+ K GRNR + Sbjct: 453 GSEVGFVTVSVGVAVWQPDGARAPHIAAIVEAADQALYQAKAAGRNRVV 501 >UniRef50_A8FRI3 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FRI3_SHESH Length = 578 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 2/184 (1%) Query: 111 LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAE-PLNLYLMLLDIDRF 169 L+ T+ + + ++ +D LTGL RR E + + + ++++DID F Sbjct: 389 LAVKFRATEREKLIAEHQAKIDPLTGLKNRRAFYEITPSFWKQKRTRVGVSMIIIDIDYF 448 Query: 170 KLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRI 229 K +NDTYGH +GD VL AT L R + V R+GGEEFI+++ +EA + Sbjct: 449 KAINDTYGHTVGDEVLVQFATLLNKNLRQQDIVARWGGEEFILLLPKTRLKEASTISKHL 508 Query: 230 CQLVDNHAITHSEGHINITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCMFID 288 C+ + HA + +T + G++ P + L+ +I AD+ +Y KQ G+N+ + + Sbjct: 509 CESISKHAFIADRNELQVTASIGLAHGSPAQFTLEQLISLADQQLYRAKQRGKNQISYEN 568 Query: 289 EQNV 292 +V Sbjct: 569 SPDV 572 >UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SY9_SULDN Length = 611 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 11/190 (5%) Query: 99 QDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQ--LRNAEP 156 +D ++F + TA + L +++D LTG RR++DE + L + Sbjct: 430 KDKKIESFVSVGVDITAKV------ELERLASIDKLTGAYNRRMIDEFMKKEIFLHVRDS 483 Query: 157 LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKA 216 NL L++ DID FKLVNDTYGH GD VL + ++S R + RYGGEEFI+I Sbjct: 484 KNLSLIMADIDHFKLVNDTYGHQAGDAVLSDVGRIISSTIRKSDIFGRYGGEEFIVICPN 543 Query: 217 ANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEG 276 + ++A +I + ++N T++ GV+ + ++ +I RAD A+Y Sbjct: 544 TSSQQALILAQKIREEIENFHFAEVGHK---TISLGVATLIANDEVENIIKRADDALYIA 600 Query: 277 KQTGRNRCMF 286 K+ GRNR + Sbjct: 601 KKEGRNRVVL 610 >UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QT79_PERMH Length = 509 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 5/180 (2%) Query: 109 GLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDI 166 GLL + + + +D LTG+ + + +L ++ L L++ DI Sbjct: 322 GLLLTMSFILGVIKERFKAMAEIDTLTGIYNKGKFNHLLQVELDRSKRYGRPLSLIIFDI 381 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAG 226 D FK +ND +GH GD VL+TLA ++S R + R+GGEEF+I+ + E A Sbjct: 382 DHFKKINDAFGHQAGDYVLKTLAKIVSSNIRSTDFFARWGGEEFVILAPETDLEGAQILA 441 Query: 227 VRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 +I + ++ + +T + GV+ AF + +D + RAD A+Y+ K GRNR Sbjct: 442 EKIRKAIEEYPFETVG---KVTSSFGVTEAFENDTVDSFVKRADVALYKAKDKGRNRVEI 498 >UniRef50_C1D915 GGDEF domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D915_LARHH Length = 879 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%) Query: 113 FTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN----LYLMLLDI 166 + +++ K + L +++ D LTGL RR + +L +++LDI Sbjct: 687 YLNDISERKAHEDDLVKQASTDGLTGLANRRSWLVHANRELTRCRRYPDEADCAVVMLDI 746 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAG 226 D FK VND++GH +GD VL+ LA + + R+ + + R GGEEF I++ + + AC Sbjct: 747 DHFKRVNDSHGHAVGDQVLQELARRMQAGLRETDCLGRMGGEEFAILLPQTSQDGACLFA 806 Query: 227 VRICQLVDNHAITHSEGHINITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCM 285 R+C+ + G + +T++ GVS+ ++ +D + RAD A+Y K GRNR Sbjct: 807 ERLCRKIAGVPFATEAGALVVTISLGVSQMQSDDASVDCALARADGALYAAKSGGRNRVE 866 >UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8FZ07_SHESH Length = 298 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 9/184 (4%) Query: 111 LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDR 168 LS + Y L + D L G+ RR LD + A + L + L+DID Sbjct: 93 LSLRTTRDIMQNYALKQENITDSLMGIFNRRYLDRRLKDETERALNYSQPLSIFLIDIDH 152 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK VND YGH +GD+VL+ +A + R+ + + R+GGEEF++I+ D + R Sbjct: 153 FKQVNDNYGHQVGDLVLKNIAQLIKHSLRESDVLARFGGEEFVVILPRTKDSTSYTLAER 212 Query: 229 ICQLVDNHAITHSEG------HINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGR 281 + +V++ +T E I++TV+ GV+ + + +I ADRA+Y+ K+ GR Sbjct: 213 LRHVVEDFQLTLPEESDKDSLSISVTVSIGVAGLNAQCKDCQCLIENADRALYQAKRNGR 272 Query: 282 NRCM 285 N+ + Sbjct: 273 NQVI 276 >UniRef50_Q31M78 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=3 Tax=Synechococcus elongatus RepID=Q31M78_SYNE7 Length = 1037 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 99/187 (52%), Gaps = 7/187 (3%) Query: 109 GLLSFTAALTDYKI--YLLTIRSNMDVLTGLPGRRVLDESFDHQLRN----AEPLNLYLM 162 GLL + +T+ K L ++ D LTG+ RR +L +L L+ Sbjct: 843 GLLGISTDITEQKKLEQKLQQQATTDALTGILNRRQFITLAQAELNRIYRIQRDTSLSLV 902 Query: 163 LLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEA 222 ++DID FK +ND+YGH +GD VL R+ + R GG+EF++++ N ++A Sbjct: 903 IIDIDHFKTINDSYGHTVGDQVLILWTNICQQNIREVDIFARLGGDEFVLMLPETNGKQA 962 Query: 223 CRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGR 281 + RI QLV ++ + I IT++ G++ PE LD + RADRA+Y+ KQ GR Sbjct: 963 YQVMDRIRQLVIQQSLHLPQQAIAITISVGIAVWTPEILTLDQFLERADRALYQAKQQGR 1022 Query: 282 NRCMFID 288 +R + +D Sbjct: 1023 DRIILLD 1029 >UniRef50_C7RTE2 Diguanylate cyclase with hemerythrin-like metal-binding domain protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RTE2_9PROT Length = 483 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 7/206 (3%) Query: 90 MLAIVENHWQDAHFDAFQEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESF 147 + +I+ A Q+ L A + + + L + D LTG RR ++E Sbjct: 124 IASIIHEVTPSPEIPAMQQTLDRLRQANQELQQTVVELEQVAGTDKLTGAWNRRRIEECV 183 Query: 148 DHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRY 205 ++ L L+++DID FK +ND +GH GD VL+ + L S R + + R+ Sbjct: 184 RSEMDRLNRYDQPLSLLVVDIDHFKAINDQHGHGAGDQVLQAVTALLQSRLRGTDALARW 243 Query: 206 GGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVV 265 GGEEF+++ A R+ + + +TV+ G + P + + Sbjct: 244 GGEEFVVVCPNTGRSTAALLAERLRGQIASADFPLIG---QLTVSIGAAECSPGDTWEEW 300 Query: 266 IGRADRAMYEGKQTGRNRCMFIDEQN 291 RAD A+Y K GRN+ E+ Sbjct: 301 FQRADEALYRAKTGGRNQVQIAPEKT 326 >UniRef50_B9Z7N2 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z7N2_9NEIS Length = 515 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 12/218 (5%) Query: 72 VRLMDSAHQHMHNCGRELMLAIVENHWQDAHF--DAFQEGLLSFTAALTDYKIYLLTIRS 129 +R + M + G + V + + +A A G+ + L ++ S Sbjct: 306 LRQLAREAAAMDSHGATPRIEAVRSWYFEAQQLKQALLVGMRAMQQQLNRFR-----QES 360 Query: 130 NMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 N D LTGL RR LD D + +P ++++DID FK VND+YGH GD L LA Sbjct: 361 NTDALTGLGNRRELDSVLDDWKYSRQP--FAVLMIDIDFFKSVNDSYGHDTGDQALTALA 418 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + R+ + V R GGEEF++++ A+ A R R+C V+ + + G +TV Sbjct: 419 QLMRDSAREGDVVCRMGGEEFVMLLPGADAIGAERVAERLCSRVEAYRVP---GLPALTV 475 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 + GV+ +E + ++ AD A+Y+ KQ GRNR + Sbjct: 476 SIGVAAGIADETPEALLREADDALYQAKQQGRNRVVLA 513 >UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ84_DESRD Length = 550 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 74/253 (29%), Positives = 115/253 (45%), Gaps = 15/253 (5%) Query: 55 GRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGREL---MLAIVENHWQDAHFDAFQEG-L 110 GRW+ + + + + + N R++ +++ E + +A + + + Sbjct: 300 GRWLSEV--YRDQNPQVIEDIHRCFESRSNLRRQMSYTLVSTGEEKYIEASYVYVPDRHV 357 Query: 111 LSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDI 166 ++ +T + Y L S D LTGL RR + A + L L +LDI Sbjct: 358 MAMVNDITHQQQYQEHLKRLSRTDELTGLFNRRHFITLMHKEFSRARRTHERLTLAMLDI 417 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAG 226 D FK VND YGH +GD VL+ L L R Y+ RYGGEEF I + +A Sbjct: 418 DHFKDVNDKYGHDVGDHVLQHLGRILREDVRPYDIAARYGGEEFAICFPDTDLSQADHIC 477 Query: 227 VRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNR-- 283 R+ L ++ + G I TV+ G+S PE E LD ++ AD A+Y K GRNR Sbjct: 478 ERLRTLCAASEVSRNGGTIGFTVSFGLSELRPEHEDLDGLLKSADNALYAAKANGRNRIE 537 Query: 284 --CMFIDEQNVIN 294 ++ D+Q + Sbjct: 538 HDVVYCDQQTGCS 550 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 10/251 (3%) Query: 42 EITDNHSYGLCQF-----GRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVEN 96 E + +C+ G H+ + + + + G+E + + Sbjct: 366 EDFHEKYHCICELFMPEEGFLRRHINGVYWFNHVIQNKHEPHYAKVQLNGKEYIFLVKAT 425 Query: 97 HWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP 156 +A+ D + L++ YK L + D LTG+ R + + + +++ + Sbjct: 426 EISNAYGDQYVSVLMTDITEEEHYKSQLEHLI-IHDELTGVYNRHYFNRTLEQEIKRHQR 484 Query: 157 L--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIV 214 + +DID FK++NDTYGH +GD VL +LA ++S R + R GGEEF+I++ Sbjct: 485 YQSPFSMAFMDIDHFKMINDTYGHDVGDAVLVSLAKNISSLLRSTDVFCRVGGEEFVIMM 544 Query: 215 KAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMY 274 + E A RI V+ I+ + IT++ G+ + + RAD A+Y Sbjct: 545 PETSLENALIISERIRSTVEG--ISSKDVPEKITISMGLVELNSWDNVQSFYKRADEALY 602 Query: 275 EGKQTGRNRCM 285 + K+ GRNR Sbjct: 603 KAKENGRNRIE 613 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 4/172 (2%) Query: 118 TDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDT 175 +D L+ + +D LTGL RR DE D + A+ +++ D+D FK VND Sbjct: 215 SDELQDELSEIARIDPLTGLYNRRAFDECCDIEFSRAQRSGAPFAIIMCDLDHFKRVNDR 274 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 YGH +GD VLR A L R ++ V R+GGEEF++++ + E+ ++ + Sbjct: 275 YGHHVGDEVLRRFANTLKEHIRKHDVVARFGGEEFVLLLPGKDTEQGLEVAEKLRAKTAD 334 Query: 236 HAITHSEGH-INITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCM 285 IT + + ++ + GV+ + V+ RAD A+Y K+ GRNR + Sbjct: 335 TQITIGDDVCLTLSASFGVAHYDSSDREWSAVLHRADNALYAAKKQGRNRVV 386 >UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WZN3_9GAMM Length = 395 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 8/190 (4%) Query: 105 AFQEGLLSFTAALTD---YKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--L 159 F G+L+ + L Y+ + + D LTGL RR L + F H++ A L Sbjct: 195 PFVAGVLTLVSLLLRRWVYREAQVRAMAVQDPLTGLSNRRALFDQFAHEMARARRTGEAL 254 Query: 160 YLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAND 219 + ++D+D FK +ND +GH GD VL +A L R+ + + R GGEEF++++ Sbjct: 255 SVCVMDLDHFKQINDRHGHAAGDTVLVRVANLLRECLRETDRIGRIGGEEFVLVLPDTGH 314 Query: 220 EEACRAGVRICQLVDNHAITHS-EGHINITVTAGVSRAFPEE--PLDVVIGRADRAMYEG 276 E A + R + + + ++ + GV A E ++ RAD A+Y Sbjct: 315 EGAEKVIERCRAALVGTPVMLDVGEPLTVSASFGVVTALAGEQATESQLVSRADDALYLA 374 Query: 277 KQTGRNRCMF 286 K+ GRNR F Sbjct: 375 KKRGRNRVEF 384 >UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZW4_HYPNA Length = 455 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 63/175 (36%), Positives = 90/175 (51%), Gaps = 5/175 (2%) Query: 116 ALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVN 173 + ++ S +D LTGL RR ++ + ++ A N L LM+ DID FK VN Sbjct: 277 DILRQRVDRGLELSVIDQLTGLHNRRYMNGQLEQFMQRAARGNQPLSLMMTDIDHFKAVN 336 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 DT+GH GD VLR + L + R + V R GGEEF++++ + AC A RI + V Sbjct: 337 DTHGHQAGDDVLREIGKRLRANVRPTDVVCRTGGEEFVVLMPNTPGDLACAAAERIRKAV 396 Query: 234 DNHAITHSEGH--INITVTAGVSRAFP-EEPLDVVIGRADRAMYEGKQTGRNRCM 285 G + ITV+AGVS + D ++ RAD A+Y+ K GRNR Sbjct: 397 AAEEFPVLGGSQNLRITVSAGVSTLQGAGDTTDDLMHRADTALYQAKTGGRNRVE 451 >UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6W8_ALHEH Length = 382 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 3/169 (1%) Query: 120 YKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYG 177 + L ++ D LTGL RR L E + + L ++L D+DRFK +ND +G Sbjct: 206 LMLLRLYRQATRDPLTGLFNRRALTEQIERERARFLRTGRPLTVLLFDLDRFKRINDHHG 265 Query: 178 HLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHA 237 HL+GD VL+ A + R + R+GGEEF+ + E+A R+ Q +N Sbjct: 266 HLVGDRVLQVFANVVQQNLRTTDHFGRWGGEEFLAALPETTSEQARVVAERVRQACENER 325 Query: 238 ITHSEGH-INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 +T +EG + T + GV+ +E LD + R D A+Y K GRNR + Sbjct: 326 LTLAEGPSLGFTTSIGVATLHRDETLDSLFNRVDEALYNAKAYGRNRVV 374 >UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LR80_ACIC1 Length = 710 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 4/173 (2%) Query: 114 TAALTDYKIYLLTIR-SNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFK 170 + A+ + ++ R S D LTGL R L + H++ A L L+++D+DRFK Sbjct: 493 SVAIENVLLHQEAERLSLTDALTGLWNYRYLTMTLGHEIERATRFRRPLALLMIDLDRFK 552 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 +ND +GH GD VL LA L + R+ +TV RYGGEEF++I+ + + A R+ Sbjct: 553 DINDRHGHQAGDAVLVELARRLHTTVREVDTVARYGGEEFVVILPETDADGAAHTAERLR 612 Query: 231 QLVDNHAITHSEGHINITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTGRN 282 Q V + I +T + G++ +++ AD A+Y K +GR+ Sbjct: 613 QAVRGTPFHVEQMDIPVTASIGIAVFPRHGSSAAILLRAADEALYVAKHSGRD 665 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 5/184 (2%) Query: 112 SFTAALTDYKI-YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDR 168 A+ + K+ L +S D LT L RR L++ +L A+ ++ ++++D+D Sbjct: 582 QLALAIANLKLREQLEEQSLRDPLTKLFNRRYLEQRLSQELARAKRHHYSVGVLMIDVDH 641 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK ND+ GH GD +L ++ T L + R + RYGGEE II+ A EEA + Sbjct: 642 FKRFNDSLGHDAGDRILASIGTLLKNNIRTSDVACRYGGEEITIILPDATLEEASQKAEF 701 Query: 229 ICQLVDNHAITHSEGHIN-ITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + Q + I +S +N +T + GV+ E +I AD+A+Y+ KQ GRNR + Sbjct: 702 LRQAIAEMKIEYSGKIVNSVTASFGVACYPDHGETGQEIIQIADKALYDAKQAGRNRVIV 761 Query: 287 IDEQ 290 ++ Sbjct: 762 APKE 765 >UniRef50_D1B7Z4 Sensor protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7Z4_THEAS Length = 917 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 100/183 (54%), Gaps = 4/183 (2%) Query: 104 DAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYL 161 D +LS T + + L + D LTGL RR + E + ++ + E +L + Sbjct: 731 DDLTLRVLSGTRVMEVQRK--LRFMARHDQLTGLLNRRAVIEMEEREMARSVREGGSLSV 788 Query: 162 MLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEE 221 ++DIDRFK +NDTYGHL GD VLR +A + S R Y+ V RYGGEEF++I+ A+ + Sbjct: 789 AMMDIDRFKAINDTYGHLAGDQVLREVARRVGSKLRVYDVVGRYGGEEFLLILPGASLGD 848 Query: 222 ACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGR 281 A R R+ + + + + I +T + GV+ P+ +D + AD+A+Y K +GR Sbjct: 849 AKRLCERMRSAIGSEPVLYDGLQIPVTASFGVAEFVPQLTVDQLNNLADQALYLAKASGR 908 Query: 282 NRC 284 + Sbjct: 909 DAV 911 >UniRef50_C4XH70 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XH70_DESMR Length = 570 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 21/276 (7%) Query: 23 YQWLVSMFH-SVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQH 81 W+ + H +V R N G FG ID G + L R + + Sbjct: 311 IFWVARLLHRAVTNRIVELTRYAGNVRDG--HFGGAIDMAGSDEIGLL--ARALADMNGR 366 Query: 82 MHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRR 141 +H+ L E+ + + L D K L + S D LTGL RR Sbjct: 367 IHDLVGGL-----EDKVRQRTLE------LDAKNRELDAKNQALAVLSLTDRLTGLCNRR 415 Query: 142 VLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDY 199 LD+ + R A ++++D+D FK VNDT+GH +GD VL +A L + R+ Sbjct: 416 RLDQVLSGEWRRAHRYGTPFSVIMIDLDNFKDVNDTFGHAVGDAVLLRVADILLAVVRET 475 Query: 200 ETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE 259 + V R+GGEEF+++ E+A + + + + IT + G++ + Sbjct: 476 DVVGRFGGEEFLLVCPETTVEDARVLAEALRRELQDTDFPIVG---RITASFGLADYEAD 532 Query: 260 EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINR 295 ++ RAD+A+Y KQ+GRN+ + ++R Sbjct: 533 PGPAALVARADKALYRAKQSGRNQVIVAPTTAAVSR 568 >UniRef50_Q216C5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodopseudomonas palustris RepID=Q216C5_RHOPB Length = 735 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 5/168 (2%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGD 182 L +++ D LTG+ RRV +E +L + +L DID FK +ND +GHL+GD Sbjct: 560 LQVQATTDPLTGMFNRRVFNEGLAAELVRFNRQQTPFSSLLCDIDHFKEINDVHGHLMGD 619 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 VL L+ L+ R + + R+GGEEF I++ A+ A ++ + + Sbjct: 620 QVLVHLSRILSRSVRQTDFLARWGGEEFGILLVGADQTAAVEFAEKLRTTIAYTVF---D 676 Query: 243 GHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 N+T + GV+ + + ++ R D A+Y K GRNR Sbjct: 677 DVGNLTCSFGVAECVLGDTPESLLARVDNALYRAKMNGRNRVELAPPP 724 >UniRef50_Q6WLF6 Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q6WLF6_9BACT Length = 584 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 75/278 (26%), Positives = 128/278 (46%), Gaps = 15/278 (5%) Query: 13 LNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDEL--P 70 L D+ Q L H ++ ++ TD L GR+ D +G D+ E Sbjct: 317 KQLKLERDSARQSLKDFIHQMLQEISALGSTTDRFQQSL---GRYADTIGQADSLESLAG 373 Query: 71 YVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSN 130 VR M + +H + + H + L + +I L+ + Sbjct: 374 VVRDMVEESRAVHGLVNQAQTRMQAEHERATELTDRVRSL--------EDEIRKLSDEVS 425 Query: 131 MDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 D LT + RR + ++F+ + + L + LLD+D FK +NDT GH GD+ L+ L Sbjct: 426 TDPLTQIANRRGMAKAFEVERARLQRSGGVLAIGLLDVDNFKKLNDTLGHHTGDLALQFL 485 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 + + R +++ RYGGEEF++++ +EA + R+ + + T E + IT Sbjct: 486 SRRVGECLRPSDSLARYGGEEFVVLLPDTPVDEAQQVLTRLQRTLSAEFFTQDENKVFIT 545 Query: 249 VTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 +AGV++ +E ++ + RAD A+YE KQTG+NR Sbjct: 546 FSAGVTQYRADEAIEAALDRADVALYEAKQTGKNRTCV 583 >UniRef50_B1J820 Diguanylate cyclase n=1 Tax=Pseudomonas putida W619 RepID=B1J820_PSEPW Length = 532 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 15/234 (6%) Query: 56 RWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTA 115 W+ + L +L AH H + + A + LL+ Sbjct: 301 LWMTYRLTLPLRQL--------AHSASHLSATQTGEQLRRIDAWYVEVAAIRRALLT-GE 351 Query: 116 ALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDT 175 L K L ++ D LTGL RR + + D ++++ ++ LDID FK VNDT Sbjct: 352 QLLQEKFGKLRQQAQSDALTGLANRRAMQLALDALMQSSR--AFAVLALDIDHFKRVNDT 409 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 +GH GD VL+ LA L +R + R GGEEF +++ +A R RI V+ Sbjct: 410 FGHDAGDEVLKHLAELLRHNSRQDDLPCRVGGEEFTMLLPDTGLADARRIAERIRSAVEQ 469 Query: 236 HAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCMFID 288 H +TV+ GV+ P+ + V+ +AD +Y+ K GRNR +D Sbjct: 470 ADSPHVG---KLTVSIGVACRRPDTQQAGSVLKQADEQLYKAKHNGRNRVEVLD 520 >UniRef50_Q1J085 Diguanylate cyclase n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J085_DEIGD Length = 385 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 56/163 (34%), Positives = 83/163 (50%), Gaps = 4/163 (2%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRN-AEPLNLYLMLLDIDRFKLVNDTYGHLIGD 182 LL ++ D LTGLP RRVL + + L + ++LLD+D FK +NDT+GH GD Sbjct: 210 LLERQARTDPLTGLPNRRVLYQEIEQLLLDLGRGSPGGVILLDLDHFKAINDTHGHPTGD 269 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 VL L R + + R+GGEEF++++ A E R+ + N + Sbjct: 270 DVLVQTGQLLRLDLRSEDILGRWGGEEFMVVLPATPAEGIGLVAERLRARLQNTPHPVAG 329 Query: 243 GHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 +T + GV+ A P + + RAD A+Y KQ GRNR + Sbjct: 330 I---VTASFGVAAARPGDTFGELTTRADGALYRAKQGGRNRVV 369 >UniRef50_B4S1M7 GGDEF domain protein n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S1M7_ALTMD Length = 949 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 2/169 (1%) Query: 119 DYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTY 176 + + LT S D LTGL RR + + + + L+LLDID FK +ND Y Sbjct: 780 EEVVEKLTRLSTQDSLTGLKNRRYFTQRAKAEWQEFQRHGHTFSLLLLDIDYFKRINDEY 839 Query: 177 GHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNH 236 GH GD VL +A L S R+ + + R+GGEEF+I++ + ++EA ++ + V + Sbjct: 840 GHQTGDSVLVKIAKILQSSLRESDVIARWGGEEFLILLPSLKEQEAYWVAEKLRKAVASL 899 Query: 237 AITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 I +N+T+T GV+ + ++ I D+ +Y+GK+ GRN + Sbjct: 900 VIDSPPYQLNVTITCGVADIKNYDSIEACIHAVDKKLYKGKEAGRNAVV 948 >UniRef50_B3E3B5 Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E3B5_GEOLS Length = 669 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 7/180 (3%) Query: 110 LLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLD 165 ++ A + K LL + +D LTG+ RR+ D + A N L L++LD Sbjct: 491 IIDSRRAQQELKHANELLATEARIDFLTGIYNRRMFDGLLVAETARACRYNSPLSLIMLD 550 Query: 166 IDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRA 225 +D FK +NDT GH GD VL+ +A ++ R ++ R+GGEEF+I+ + +A Sbjct: 551 LDHFKQINDTQGHAAGDHVLQKVAELISGRIRSHDIFSRWGGEEFVILTPKNDTAQAAVL 610 Query: 226 GVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + +++ + + +T + GV+R EP +V I RAD A+Y+ K GRNR Sbjct: 611 AEILRDMIEQYDF---GNGLRLTCSFGVTRHICGEPAEVFIERADTALYQAKHNGRNRVE 667 >UniRef50_Q21GT7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21GT7_SACD2 Length = 346 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 2/169 (1%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIG 181 ++ +N D LTG+ RR + E D +++ + + +LD+D FK +NDTYGH G Sbjct: 178 KISDMANRDELTGIANRRKIFEVLDTEVKRKREPNTAIGICILDVDHFKRINDTYGHQAG 237 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D VL+ +A + R + RYGGEEF++I+ + + E R+ + V + Sbjct: 238 DEVLKRIAEEVPKSLRTMDCFGRYGGEEFLLILPSTSLEGTEIKANRVREEVAKLEFKNL 297 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 +T++ G++ FPEE +D I RAD+A+YE K GRN C+ Sbjct: 298 PPGEKVTISIGIAEYFPEEEIDATIQRADKALYEAKAHGRNCCVVHPSP 346 >UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VQQ9_PSEU5 Length = 466 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 7/179 (3%) Query: 112 SFTAALTDYKIY--LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDID 167 + ++ ++ L +N DVLTG+ RR + +L A +L L++LDID Sbjct: 287 RYFQSIARLRLAHGQLAQLANTDVLTGVSSRRAFLAGLEAELARARRHNESLSLLMLDID 346 Query: 168 RFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGV 227 FK VND +GH IGD VL+ + A R ++ + R GGEEF I++ + E A Sbjct: 347 HFKRVNDVHGHPIGDAVLKQFSETCAGMLRAHDLLGRLGGEEFAIVLPHTDAEGARCVAE 406 Query: 228 RICQLVDNHAITHSEGHINITVTAGVSRA--FPEEPLDVVIGRADRAMYEGKQTGRNRC 284 +I V + + G I +TV+ G+++ P E +D ++ RAD+A+YE K+ GRN+ Sbjct: 407 KIRTAVAQTPMPTAAGDITVTVSIGLAQMEGLPGE-VDQLMARADQALYEAKRGGRNQV 464 >UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clostridium thermocellum RepID=A3DHG2_CLOTH Length = 415 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 21/228 (9%) Query: 83 HNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAAL----------------TDYKIYLLT 126 H G + L I E + + + F AL + ++ L Sbjct: 184 HKSGSYICLPITEGNITLGILQLYSKSKNYFDEALISKVKSYIEVAKPVISSKRTLHQLR 243 Query: 127 IRSNMDVLTGLPGRRVLDESFDH--QLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 + D LT L RR L++ D+ ++ L ++++DID FK +NDTYGH GD V Sbjct: 244 KNATTDKLTKLYNRRFLEQYLDNQLEITGFSNQKLSVIMMDIDNFKRINDTYGHNAGDAV 303 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT-HSEG 243 L T A + R + V RYGGEEFI I+ +++ + A RI + + + ++ Sbjct: 304 LVTFARVILRCLRQTDLVARYGGEEFIAILPSSDTKNAYDIAERIRESIAAEPMPKINDV 363 Query: 244 HI-NITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 + NI+ + GVS + + +I AD A+Y+ KQ G+NR + E Sbjct: 364 QLPNISCSFGVSTYPTHAKNKNDLIKAADIALYKAKQAGKNRVITYSE 411 >UniRef50_Q1MZ89 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q1MZ89_9GAMM Length = 577 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 118/292 (40%), Gaps = 14/292 (4%) Query: 9 DAILLNLNKAIDAHYQWLVSMFHSVVARDA---SKPEITDNHSYGLCQFGRWIDHLGPL- 64 D ++ L + +L ++ ++A A ++ S +F + Sbjct: 266 DLVVSALGSEQEEFEAFLKNLNERLLALKAWLKQGEDLEQKFSDSSTEFDLKMRGHLDEL 325 Query: 65 -DNDELPYVRLMDSAH-QHMHNCGRELMLAIVENHWQD----AHFDAFQEGLLSFTAALT 118 E M A Q + + L +E ++ H L + L Sbjct: 326 KQILESGDTNAMKGAVTQQLDDVFATLDGFKLEQKSREIVFKEHIGELNNRLTTMEKELE 385 Query: 119 DYKIYLLTIR--SNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVND 174 + K L + + D LTGLP R D + + L L++ D+D+FK +ND Sbjct: 386 EAKEQLNQSQLKAMTDSLTGLPNRGAYDVYAQQEYERYKRYGGELSLIVCDVDKFKSIND 445 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 TYGH GD VL+ ++ + TR+ + + RYGGEEF++++ E+A +I + V Sbjct: 446 TYGHQAGDKVLQLISRQVKKGTRETDLLARYGGEEFVVLLPETKQEDAVSVAEKIIEAVA 505 Query: 235 NHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + IT++ GV+ + V AD A+Y K+ GRN+ Sbjct: 506 TSPFHFRGKRVQITISCGVASFKKGYRPEQVFDAADAALYRAKENGRNQYQL 557 >UniRef50_Q1YG68 GGDEF domain protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YG68_MOBAS Length = 382 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 3/171 (1%) Query: 120 YKIYLLTIRSNMDVLTGLPGRRVLDESFDHQL--RNAEPLNLYLMLLDIDRFKLVNDTYG 177 + L + + D LTGL RR D +L R + + L+++D D FK VNDTYG Sbjct: 191 RREQSLEVDAFTDALTGLANRRAYDALIAEELAQRRGAEIGVTLLVVDFDHFKQVNDTYG 250 Query: 178 HLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHA 237 H GD L+ ++ L S R+ + V R+GGEEF +I+ + R RI ++ Sbjct: 251 HEAGDEALKVVSRILRSCVREGDYVCRHGGEEFTVILPQTGLPQGRRTAERIRHAIEAAP 310 Query: 238 ITHSEGHINITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 + + ++++TV+ GV+ A + + + AD A+YE K GR++ + Sbjct: 311 LIAGDQNLSLTVSIGVAGAPQHGDDPNTLYRCADAALYEAKSAGRDQVVVY 361 >UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VK28_9CYAN Length = 331 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 8/206 (3%) Query: 87 RELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDES 146 R+ + ++ HW A + A + L ++D LT + RR D++ Sbjct: 121 RQRVRRLLHTHWVMAEL-HRKIEQERVLKAKLEEMNQELQRLVDLDGLTQIANRRAFDQA 179 Query: 147 FDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVY 203 + + E L L+L DID FK NDTYGH GD L+ +A L R + V Sbjct: 180 LQQEWKRLAREQAPLSLILCDIDFFKAYNDTYGHQAGDECLKQVADILRKAAKRPADVVA 239 Query: 204 RYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN--ITVTAGVSRAF--PE 259 RYGGEEF++I+ + A + I + + AI H ++ +T++ GV+ P+ Sbjct: 240 RYGGEEFVVILPNTSLRGAMQVAESIRSKLKSRAIVHEGSGVSKFVTLSCGVAGVIPPPK 299 Query: 260 EPLDVVIGRADRAMYEGKQTGRNRCM 285 D +I AD+A+Y+ K GR+R + Sbjct: 300 TTPDRLIAEADQALYKAKVEGRDRVV 325 >UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TG17_HELMI Length = 324 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 10/208 (4%) Query: 87 RELMLAIVENHWQDAHFD---AFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVL 143 REL+ I D +E LL TA L + + L S++D LTGL RR Sbjct: 109 RELLARIRSALALKTEMDRRKEREEELLRVTAELEEA-VRKLQNLSSLDGLTGLANRRRF 167 Query: 144 DESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTR-DYE 200 DE + + A + L+L DID FK NDTYGH+ GD L+ +A+ + R + Sbjct: 168 DEYLASEWKRAIRNGTPISLILFDIDWFKPYNDTYGHIQGDDCLKAIASLMPKVVRRSSD 227 Query: 201 TVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI-NITVTAGVSRAFPE 259 V RYGGEEF +I+ + E A I + + I H + + +TV+ GV+ A+P Sbjct: 228 LVCRYGGEEFAVILPDTSQEGALAVAESIREALSEAGIEHRQSPLDRVTVSVGVATAYPS 287 Query: 260 EPLD--VVIGRADRAMYEGKQTGRNRCM 285 + +IG AD A+YE K+ GRNR + Sbjct: 288 PSSEPVTLIGYADEALYEAKRQGRNRTV 315 >UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSY0_9GAMM Length = 261 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 53/166 (31%), Positives = 89/166 (53%), Gaps = 3/166 (1%) Query: 123 YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLI 180 L +N D LTGL R+ + + + + L++LD+D FK +ND +GH + Sbjct: 79 KQLEELANKDALTGLYNRQYFFDHANEWDKRCRENSGHFSLLMLDVDHFKSINDRFGHPV 138 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VL+ ++ + + R + RYGGEEFI ++ N A RI +++ A Sbjct: 139 GDRVLQRVSNVIKGFMRQEDMCARYGGEEFICLLPDTNAAGAKAVAERIRLGMEHQAFLK 198 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + G ++++V+ G + + L+ +I RAD+A+YE K GRNR +F Sbjct: 199 ARG-LSLSVSIGATTMSANDNLETLIERADQALYEAKDGGRNRAVF 243 >UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QU32_CHLT3 Length = 606 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 2/175 (1%) Query: 112 SFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRF 169 + L D LTGL RR DE F+++ R L + + DID F Sbjct: 430 QLLLERLREQAETLERLVTYDGLTGLANRRHFDEQFEYEFRRTRRYKRPLSIAMSDIDFF 489 Query: 170 KLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRI 229 K VND + H +GD VL+ +A+ R + V RYGGEEF+ I N E A RA +I Sbjct: 490 KKVNDNFSHQVGDEVLKKVASIFRENVRAGDLVARYGGEEFVFIFTETNKESAIRAAEKI 549 Query: 230 CQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + ++++ ++ + +T++ GV+ + D +I AD +YE K+ GRN+ Sbjct: 550 RKAIEDYDWSNVHAGLKVTISIGVAEDAGFDGCDELIAAADSKLYEAKRNGRNQV 604 >UniRef50_B0SEM7 GGDEF domain protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SEM7_LEPBA Length = 288 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 113 FTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAE----PLNLYLMLLDIDR 168 ++LTD LL I + D LTG+ RR + + +L + P + +L D+D Sbjct: 105 LFSSLTDVNQKLLAI-AMTDPLTGISNRRSFFSNLEIELARKQRSVGPYPIAFLLFDLDL 163 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK +NDTYGH GD VL AT L + R + R+GGEEF++++ + + A + Sbjct: 164 FKSINDTYGHEFGDQVLIEFATVLKTSLRKQDFPARWGGEEFLVLLPNTDLDGAIVVAEK 223 Query: 229 ICQLVDNHAITHSEGHINITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCMFI 287 I + + + I + + G+S + +VVI +AD+ +YE K+ GRN+ Sbjct: 224 IRTSFHSLSFYAKDKRIQCSTSVGISVCNEQGINPEVVINQADQYLYEAKRNGRNQ--IY 281 Query: 288 DEQNV 292 E+NV Sbjct: 282 SEKNV 286 >UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB67_9DELT Length = 752 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 9/208 (4%) Query: 86 GRELMLAIVENHWQDAHFDAFQEGLLSFTA-----ALTDYKIYL-LTIRSNMDVLTGLPG 139 G +++ AI + + +L + ++ + ++Y + R+ D LTGL Sbjct: 538 GEQVLGAITLISSRVKAYPPAAREMLRVISHQVGVSMQNARMYQSMEERATTDGLTGLTN 597 Query: 140 RRVLDESFD--HQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTR 197 R E + H L ++L DID FK VNDTYGH +GD VL+ +A R Sbjct: 598 HRAFQERLEQLHALSERTGQKFSIILTDIDHFKSVNDTYGHPVGDAVLKRVAAIFTRRAR 657 Query: 198 DYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAF 257 + V RYGGEEF++++ + E A R+ + + IT G ++T++ GV+ Sbjct: 658 KVDIVARYGGEEFVLVLPDTDAEGAAVFANRLREEIAAQTITSDNGSFSVTLSLGVAEFP 717 Query: 258 PEEP-LDVVIGRADRAMYEGKQTGRNRC 284 + +I AD+A+Y K+ GRNR Sbjct: 718 RDSTKRHELIELADQALYYCKEHGRNRV 745 >UniRef50_B9ZP43 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZP43_9GAMM Length = 336 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 5/182 (2%) Query: 107 QEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNL--YLMLL 164 + L A + L ++ D LTG+ R+ +H++ AE NL L+ L Sbjct: 148 EAALRQEVEATLRQQQEELVRLASTDALTGVWNRQKFKTEAEHEVARAERYNLPLSLIFL 207 Query: 165 DIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACR 224 D+D FK VND YGH GD +LR + L + R+ + + R+GGEEF+I+V A+ + A Sbjct: 208 DLDYFKEVNDRYGHATGDAILREMCQRLQACLRESDRLGRWGGEEFLILVPHADSDRAAL 267 Query: 225 AGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 ++ Q + + H + ++++ GV P + L+ ++ +AD A+Y K GRNR Sbjct: 268 LAEKLRQAIADTPAAHGQ---PMSISLGVVSREPGDALEDLVRKADAALYRAKARGRNRV 324 Query: 285 MF 286 Sbjct: 325 EV 326 >UniRef50_Q2BQN9 Diguanylate cyclase, putative n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQN9_9GAMM Length = 529 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 4/187 (2%) Query: 102 HFDAFQEGLLSFTAALTDYKIYLLT--IRSNMDVLTGLPGRRVLDESFDHQLRN--AEPL 157 ++ + K ++ +R+ D LTGLP R DE + Sbjct: 340 RYEDLIGKVEQMEEETRKVKAHMEEERLRARTDPLTGLPNRAAYDEQIAQEYERWSRYRT 399 Query: 158 NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAA 217 + +++ D+D FK +NDTYGHL GD VLR +A + R + V RYGGEEF+I++ + Sbjct: 400 SFSVVVADLDFFKKINDTYGHLAGDKVLRLVAKVITKNIRVTDFVARYGGEEFVILLPST 459 Query: 218 NDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGK 277 EEA +A ++ + + + + IT++ GV+ + LD V RAD A+Y+ K Sbjct: 460 VAEEAAQAMDKLRESLASSPFNFHGKPVGITMSFGVTEIKEGDSLDDVFTRADEALYQAK 519 Query: 278 QTGRNRC 284 + GRN Sbjct: 520 EDGRNLV 526 >UniRef50_B6BKB0 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKB0_9PROT Length = 427 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 17/279 (6%) Query: 20 DAHYQWLVSMFHSV--VARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDS 77 ++H +W++++ + D PE+ N LC+FG+W+ + ++++ Sbjct: 153 ESHIKWILNLILYIERSVYDNDYPELNPN----LCEFGKWMHSATTSYLISTTHFKVIEK 208 Query: 78 AHQHMHNCGRELML-AIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIR-SNMDVLT 135 H ++H+ ++ N + + + + ++ + + +L I S D LT Sbjct: 209 LHMNLHDLAANVVNHCQNNNDPRPSTLIHLMQRIDYYSLEIGNEIAFLNEIEESAKDPLT 268 Query: 136 GLPGRRVLDESF--DHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLA 193 L RR+ ++ + A LM+ D+D FK VND+YGH +GDVVL+ ++ L Sbjct: 269 HLLTRRLFNKIMLNKLDIAKATGREFALMMCDLDHFKRVNDSYGHAVGDVVLKHFSSILE 328 Query: 194 SWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGV 253 R + ++R+GGEEF++++ + +EA ++C + + + I TV+ G Sbjct: 329 EILRKSDYIFRFGGEEFMVLLPMTDKKEALILAQKVCDAIVASEVIVEDITIKYTVSIGT 388 Query: 254 -------SRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 S +E +D I + D +Y K+ GRNR Sbjct: 389 ISIIIDNSVVIGQEAIDKYITQVDERLYLAKERGRNRVE 427 >UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors n=2 Tax=Synechococcus elongatus RepID=Q31K54_SYNE7 Length = 1099 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 7/184 (3%) Query: 112 SFTAALTDYKIYL-LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDR 168 A+ + ++ L + D LTGL RR L E F+ +L A+ ++ +++LDID Sbjct: 891 QLALAIANLQLRETLRQENLRDPLTGLFNRRYLQEFFEQELARAKRSGDSIGILMLDIDY 950 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK ND +GH GD+VL+ +A L + R + V R+GGEE I++ A+ E + R + Sbjct: 951 FKRFNDEFGHDAGDMVLKQVARALLNQVRASDVVCRFGGEEIAILMPGASLEVSARKADQ 1010 Query: 229 ICQLVDNHAITHSEGHI-NITVTAGVSRAFPEEPL--DVVIGRADRAMYEGKQTGRNRCM 285 I Q + I++ E + ++T++ GV+ AFPE L D +I AD ++Y+ K GRN + Sbjct: 1011 IRQAIAQLIISYHEQTLPSLTISIGVA-AFPESGLASDTLIKSADTSLYQAKAAGRNCVV 1069 Query: 286 FIDE 289 Sbjct: 1070 VHQP 1073 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 15/217 (6%) Query: 75 MDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYK--IYLLTIRSNMD 132 M + H++ H EL L+ V + +++ K LL +S D Sbjct: 487 MKTRHKNGHEIDVELSLSAVRIKDSWHA--------IGIIRDISERKRFEELLYRQSITD 538 Query: 133 VLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLAT 190 LT + RR + + ++ + L++ D+D FK VND +GH GD+VL+++A Sbjct: 539 PLTNIYNRRFFMQMLEQEIERVKRNKKLFSLIMFDLDHFKNVNDRFGHAAGDMVLKSVAD 598 Query: 191 YLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVT 250 + R + R+GGEEFII++ + A + + + + +G +T + Sbjct: 599 TVKGRIRKTDYFARWGGEEFIILLPETSLNNAAELAEELRKKISETEL---DGIGKVTAS 655 Query: 251 AGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 GV+ + +D V+ R D A+YE K +GRN Sbjct: 656 FGVTEYRNTDTVDTVLLRVDGALYEAKGSGRNCVKIA 692 >UniRef50_C6P3V9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3V9_9PROT Length = 456 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 115/273 (42%), Gaps = 15/273 (5%) Query: 23 YQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHM 82 +W + ++ E T +FG W+ H + + P + + + Sbjct: 192 SEWAQHILLHLLG-----DEGTGVPEMKHSEFGLWLQHKASIIFHDAPELERIRVC---V 243 Query: 83 HNCGRELMLAIVENHWQ----DAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLP 138 R L+ ++E + + LT + + S D LT L Sbjct: 244 EKLERTLLPGLIEKRRNGGNAREAMRQVEADIGEVKFLLTGLFDRFIEVESGRDSLTRLL 303 Query: 139 GRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT 196 RR L +L A + ++LLDID FK +NDT+GH GD+VL+ + + S Sbjct: 304 NRRYLPTILMRELALARNSDVPFAILLLDIDHFKNINDTHGHDSGDMVLQQASDLVTSSV 363 Query: 197 RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI-NITVTAGVSR 255 R + ++RYGGEE ++++ ++A + I + + +G + +TV+ GV+ Sbjct: 364 RVGDFIFRYGGEELLVVLVEIGRDQALQVAETIRERFAAEPMRVGDGKVMQVTVSIGVAA 423 Query: 256 AFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + ++ AD A+Y K +GRNRC D Sbjct: 424 YNGHPDYERIVKDADDALYRAKNSGRNRCELAD 456 >UniRef50_Q2SUR3 GGDEF domain protein n=54 Tax=Burkholderiaceae RepID=Q2SUR3_BURTA Length = 628 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 5/199 (2%) Query: 92 AIVENHWQDAHFDAFQEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDH 149 + + Q E + AL + K L + D LTG RR E Sbjct: 428 SFATVYSQQDLMARLAESMARTEGALQELKRTNQKLEHLATTDPLTGASNRRKFIEQMQA 487 Query: 150 QLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGG 207 ++ A+ L+ LD+D FK +ND YGH +GDVVLR + R Y+ + R GG Sbjct: 488 EIARAKRDGTAFSLLALDLDNFKTINDNYGHQVGDVVLRNFVRQCLAAIRPYDHIARVGG 547 Query: 208 EEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA-FPEEPLDVVI 266 EEF++++ + A R+ + N + H +TV+ GVS+ + +D ++ Sbjct: 548 EEFMVLLPRMLADTASGIAERVRTTIANASFGIDGTHTPVTVSIGVSQYGRDGDTVDEIL 607 Query: 267 GRADRAMYEGKQTGRNRCM 285 AD+ +Y K GRNR + Sbjct: 608 SAADKLLYRAKNEGRNRVV 626 >UniRef50_B3QH74 Diguanylate cyclase n=14 Tax=Bradyrhizobiaceae RepID=B3QH74_RHOPT Length = 355 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 8/235 (3%) Query: 58 IDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAAL 117 + + +D + + A H L + Q A+ A +E L + + Sbjct: 106 LGNTASFGDDLRGESQKLSLATDHDQIKAIVERLVVTTREMQQAN-SALEERLSTSKQEI 164 Query: 118 TDYKIYLLTIRSN--MDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVN 173 + ++ L IR+ D LTGL R+ D + +RNA L L+++DID FK N Sbjct: 165 ANLQVSLDAIRAESLTDPLTGLGNRKHFDRTVQEAIRNAGASQQPLSLLMMDIDHFKSFN 224 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 DTYGHL GD VLR + L + + RYGGEEF +++ +A I +LV Sbjct: 225 DTYGHLTGDQVLRLVGMTLKQSIKGQDFTARYGGEEFAVVLPNTPMRQAIIVADNIRRLV 284 Query: 234 DNHAIT---HSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + + E +T++AGVS P + + +I RAD +Y K+ GRNR + Sbjct: 285 MSKELKKKSTGEILGRVTLSAGVSTLKPNDDAEALIERADACLYAAKRNGRNRVI 339 >UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobacterineae RepID=Q1D632_MYXXD Length = 710 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 11/236 (4%) Query: 63 PLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTA-----AL 117 + D+ +R + + G ++ +V + A F+ ++ A A+ Sbjct: 461 QIIFDDETQIRGLGALKIFPLVAGDRILGTLVAGSRKKAAFEQDVLRMIEVIAIQAAQAV 520 Query: 118 TDYKIYL-LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVND 174 ++Y + + D LTGL R D L + L+L D+D FK VND Sbjct: 521 LRAQLYEQMERMATTDGLTGLYNHRTFQAKADEVLAQSRRYQRKFSLILTDVDHFKSVND 580 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 TYGH GD VL+ +A + + RD + V RYGGEEF+II+ + + A RI + V Sbjct: 581 TYGHPTGDQVLKGVARIIKTMARDTDIVARYGGEEFVIIMPETDAKGAFTISERIREAVK 640 Query: 235 NHAITHSEGHINITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNRCMFID 288 G + IT++ G++ FP+ ++ +I AD+ +Y K+ GRN+ + +D Sbjct: 641 AEVFQTEMGPLRITMSLGIAT-FPDSAMEKQQLIDLADQCLYHSKRNGRNQSVTVD 695 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 91/195 (46%), Gaps = 6/195 (3%) Query: 98 WQDAHFDAFQEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAE 155 + A L + K +L S D LT L RR L E D + + + Sbjct: 109 FDTGELVARVRVQLKMKGLQDELKRSNEMLRTLSITDPLTHLHNRRHLMEMVDKEFQRSS 168 Query: 156 PL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIII 213 L L++LDID FK +NDTYGH GD VL LA + R Y+ RYGGEEF+++ Sbjct: 169 RKGAPLSLVILDIDYFKKINDTYGHQEGDRVLTILADIVRRRLRSYDLAARYGGEEFVLL 228 Query: 214 VKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE--EPLDVVIGRADR 271 + +EA R+ V H S G + IT++ GV+ E +D + +AD Sbjct: 229 LPETPVQEALSIAERLRLEVQEHVFEGSLGGLVITISLGVATYPSSRVESIDSLFRQADE 288 Query: 272 AMYEGKQTGRNRCMF 286 A+Y KQ GRNR Sbjct: 289 ALYRAKQGGRNRVEL 303 >UniRef50_Q2W7A4 Response regulator n=4 Tax=Proteobacteria RepID=Q2W7A4_MAGSA Length = 634 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 8/208 (3%) Query: 90 MLAIVENHWQDAHFDA---FQEGLLSFTAALTDYKIYLLTIR--SNMDVLTGLPGRRVLD 144 +L +V + Q+ H + + L A + + K + T+R S D +TGL RR L+ Sbjct: 418 VLQLVASEGQEQHLLSKIPYVNVYLREAAPVLETKRLMETLRESSLSDPMTGLNNRRFLE 477 Query: 145 ESFDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETV 202 E D + N L +M+LD+D FK+VNDTYGH GD VL+ L+ L R + V Sbjct: 478 EYVDTLVANVHRRKSALTVMMLDLDHFKMVNDTYGHDAGDAVLKALSKVLRQAVRASDLV 537 Query: 203 YRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EP 261 R+GGEEF+I++ EA + +I LV+ + I T++ G+S + + Sbjct: 538 IRFGGEEFLIVLVDTPSAEADQVAEKIRALVEALVVQTGTVTIRKTISIGLSDFPTDSDT 597 Query: 262 LDVVIGRADRAMYEGKQTGRNRCMFIDE 289 + AD A+Y+ K+ GRNR + +E Sbjct: 598 FWQAVKFADVALYQAKENGRNRVVRFNE 625 >UniRef50_C1SHV7 Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHV7_9BACT Length = 396 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 74/295 (25%), Positives = 119/295 (40%), Gaps = 26/295 (8%) Query: 17 KAIDAHYQWLVSMFHSVVARDASK-PEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLM 75 A+ H L H V + + F ID + + + Sbjct: 100 NALSDHIISLERRQHKVSNFIEDVFTKFVGLQAELTSSFSNSIDFVEEDLALDQKLLGDA 159 Query: 76 DSAHQHM-----HNCGRELMLAIVEN---------HWQDAHFDAFQEGLLSFTAALTDYK 121 + H+ + R ML N + D + + + L DYK Sbjct: 160 EDMHKVLKSENSIEYLRTKMLESFSNFVDTFGSKTESKKGRLDTINKEYTTVNSELEDYK 219 Query: 122 IYLLTIR---------SNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFK 170 + ++ S D LT L R+ +D ++ + +ML+DID FK Sbjct: 220 KQVSKLQNDLNKYKTESITDHLTSLYNRKYMDIKMTEEIDRYRRMNTSFCIMLVDIDYFK 279 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 VND YGHLIGD VL+ LA L R + +RYGGEEF+I++ + A +I Sbjct: 280 NVNDNYGHLIGDQVLKHLAKLLKDSIRKTDFAFRYGGEEFLIMLTNVDVRNATHVAEQIR 339 Query: 231 QLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + + + E N+T + G++ ++ + VI RAD +Y+ KQTGRN+ + Sbjct: 340 KKLKETNFSLKENSFNVTASFGIALFEKDDTQESVIKRADERLYKAKQTGRNKIV 394 >UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YC42_9BURK Length = 409 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 94/192 (48%), Gaps = 4/192 (2%) Query: 98 WQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL 157 W+ A Q+ L K L + D LTGL R E ++L+ A+ Sbjct: 218 WRKFTTIAVQKHQLEKAHTELQLKQRELERLTRQDGLTGLFNRNTFVELSTNELKRAKRQ 277 Query: 158 NLY--LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVK 215 ++LLD+D FK +NDT+GH GDVVLR +A + + R + V R GGEEFI+++ Sbjct: 278 GSATTILLLDLDHFKRINDTWGHPAGDVVLRHVAQTMVNSVRSTDLVGRLGGEEFIVLLP 337 Query: 216 AANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEP--LDVVIGRADRAM 273 E + + +I Q ++ I I +T + G+S EE D + AD+A+ Sbjct: 338 HTTAEASRKIAEKIRQRLEVSDIRWEGKRIAVTASIGLSGTTAEESREFDSLYTEADKAL 397 Query: 274 YEGKQTGRNRCM 285 Y KQ GRNR + Sbjct: 398 YLAKQRGRNRVI 409 >UniRef50_Q1K485 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K485_DESAC Length = 370 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 7/238 (2%) Query: 55 GRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFT 114 + I D+ Y + +L+L+ E Q L+ Sbjct: 128 NQKIRSQQRNDDGVEIYFAGKKHVINSERSQILDLLLSTYEGALQQKRELERMNEQLNEA 187 Query: 115 AALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLV 172 + + + D LTG R +E+F +R A+ +L L++ DID FKL+ Sbjct: 188 LDTIKKRNAEIAELAVRDSLTGSFNRGYFNETFPGAIRRAQRYQQSLSLIMCDIDHFKLI 247 Query: 173 NDTYGHLIGDVVLRTLATYLASWTRDY-ETVYRYGGEEFIIIVKAANDEEACRAGVRICQ 231 ND YGH GD V++++A LA R + + RYGGEEF+I++ N E A R+ + Sbjct: 248 NDHYGHQTGDRVIKSVAQGLAQSLRQGVDWLARYGGEEFVIVLPETNLEGALVVAERMRR 307 Query: 232 LVDNHAITHSEGHINITVTAGVSRAFPEE----PLDVVIGRADRAMYEGKQTGRNRCM 285 + + I I +T + GV+ PE + +I ADR +Y+ K+ GRN C Sbjct: 308 SIADQEIACDPQSIRLTASFGVAGCDPEHASMLTGNGMIAAADRCLYQAKKEGRNCCC 365 >UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQK2_CHRVO Length = 585 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 6/223 (2%) Query: 72 VRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNM 131 +R + A ++M + + + A + L + L K L + Sbjct: 366 LRQLSDAMRNMTATLLARERQLADVNANLEQMVADRTEQLRESNRLLVQKAAQLAQLARN 425 Query: 132 DVLTGLPGRRVLDESFDHQ-LRNAE-PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTGL R +E + LR+ ++LLD+D FK VNDT+GH GD VLR +A Sbjct: 426 DALTGLHNRMAANEQLQEEHLRHGRSGAPYAVLLLDVDHFKRVNDTHGHDAGDRVLRHIA 485 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 L R + V R+GGEEF++++ + + A +I V+ +T+ Sbjct: 486 DILRRAARATDFVARFGGEEFLLLLPETDADGAAVLAEKIRASVEQSQAPDVG---RVTL 542 Query: 250 TAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 + G++ P + ++ + RAD+A+Y K GRNR ++ Sbjct: 543 SIGLATVVPADSQPEMAVKRADQALYRAKAAGRNRVEAAARED 585 >UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Arthrospira RepID=B5W0E3_SPIMA Length = 1380 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 10/201 (4%) Query: 92 AIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL-LTIRSNMDVLTGLPGRRVLDESFDHQ 150 A+ E Q AH A Q G+ A+ + + L +S D LTGL RR L+E + Sbjct: 1184 ALSEGKQQLAHTVAEQIGM-----AIANLNLRATLEHQSIRDPLTGLFNRRYLEEYLSQE 1238 Query: 151 LRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGE 208 + A+ + ++++DID FK NDT+GH GD VL+ + L R+Y+ RYGGE Sbjct: 1239 IARAQRQKHPIGVIMMDIDNFKHFNDTFGHDAGDYVLQKVGELLKQKVREYDVACRYGGE 1298 Query: 209 EFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI-NITVTAGVSRAFPEEPLD-VVI 266 E +I+ ++ E +I + + + + H+ +IT + GV+ + +I Sbjct: 1299 EMTLILPGSSLENTSMRAEQIREAIASLVVASGGQHLGSITASFGVAAFPKHGSIGIDLI 1358 Query: 267 GRADRAMYEGKQTGRNRCMFI 287 AD A+Y K GRNR + I Sbjct: 1359 QAADAALYRAKADGRNRVVII 1379 >UniRef50_Q085X7 Diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q085X7_SHEFN Length = 357 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 6/198 (3%) Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFD 148 L+L+ + + A ++ +LS+ +AL K Y + D LT L RR Sbjct: 154 LILSFLTTTFLSALYE--YSRMLSYNSALKLGKKY--QQLALSDPLTTLANRRNALTILQ 209 Query: 149 HQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 + N L ++L D+D FK+VND YGH GD+VL L+ R + V R+G Sbjct: 210 QEKSRISRNNEPLSVLLCDLDHFKMVNDKYGHNCGDMVLTELSQVFKQSVRQQDCVARWG 269 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVI 266 GEEF+ I+ + E+A +I V +H + + I++T++ G+S+ ++ +D +I Sbjct: 270 GEEFLFILPQTSAEQASVIAEKIRTNVHHHKVHFLKHEISLTISIGISQLTDDQNIDELI 329 Query: 267 GRADRAMYEGKQTGRNRC 284 ADR +Y+ K+ GRN+ Sbjct: 330 NNADRNLYQAKKNGRNQV 347 >UniRef50_A0LAY9 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAY9_MAGSM Length = 220 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 7/207 (3%) Query: 90 MLAIVENHWQDAHFDAFQEGLLSFTAALTDYKI----YLLTIRSNMDVLTGLPGRRVLDE 145 MLA E Q F++ ++S A Y + L + + D LTG+ R E Sbjct: 9 MLAPSEEAHQFLIFNSIMRTIISLVGAWLIYSLRKALQQLEVMATHDKLTGILNRHGFQE 68 Query: 146 SFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVY 203 + + ++ + L ++++DID FK +ND++GH IGD+VL++L + L R + V Sbjct: 69 RGKYIIDQSQRHSWPLAVVMMDIDHFKKINDSFGHDIGDLVLQSLGSELKKSVRSTDIVA 128 Query: 204 RYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH-INITVTAGVSRAFPEEPL 262 R GGEEF +I+ + + A + I + ++ ++ +G + T++ GV+ + + Sbjct: 129 RLGGEEFALILPNTDSKHAHQIADSIRKKIETSRLSLPDGKFLTYTLSLGVTSGLGIDKM 188 Query: 263 DVVIGRADRAMYEGKQTGRNRCMFIDE 289 D+++ +AD A+Y K TGRNR + + Sbjct: 189 DLLLNQADNALYRAKGTGRNRVVSFHQ 215 >UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8J1_ALHEH Length = 689 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 97/232 (41%), Gaps = 6/232 (2%) Query: 56 RWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTA 115 W + R++ V + + ++ + A Sbjct: 459 LWGAEKVAAPLTPRHSFAAWREEVRGHSAPWRDIEREAVLDLADEVAVLLSRKEIDLLNA 518 Query: 116 ALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVN 173 LT+ L ++ D LTG+ R + E + + E L+L DID FK VN Sbjct: 519 QLTEA-NRRLKRQATTDSLTGVWNRYRMQEQIELERGAHERYGTPCSLLLFDIDHFKAVN 577 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 D YGH GD VL LA + R + + R+GGEEFI++ + EEA R+ Q + Sbjct: 578 DQYGHEAGDQVLVALARAVVGELRATDFLGRWGGEEFIVLATNSAPEEAWTLAERLRQCI 637 Query: 234 DNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 G +T++ GV+ + +D +I RADRAMY KQ GRNR Sbjct: 638 AGLRFP---GVGPVTISVGVASLSRGDTVDRLIDRADRAMYRAKQRGRNRVE 686 >UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VMP7_9CYAN Length = 505 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 7/171 (4%) Query: 122 IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHL 179 L +D LTG+ RR D+ + + E L L L+L DID FK NDTYGH Sbjct: 320 NQKLKYLVTIDGLTGIANRRKFDQYIHREWQRLFREQLPLSLILGDIDFFKRYNDTYGHQ 379 Query: 180 IGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 GD LR +AT + R + V RYGGEEF +I+ N + A I Q V+ I Sbjct: 380 AGDDCLRNVATKIRLLVKRPADLVARYGGEEFAVILPNTNAKGAIHVAETIRQGVETLKI 439 Query: 239 THSEGHIN--ITVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQTGRNRCM 285 H + +T++ GVS P ++ +I +AD+A+Y K GRN+ + Sbjct: 440 PHGGSESSKYVTLSLGVSSLIPNSLVNVEGLINQADQALYRAKAGGRNQTV 490 >UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU2_ALHEH Length = 686 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 58/180 (32%), Positives = 92/180 (51%), Gaps = 7/180 (3%) Query: 108 EGLLSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLML 163 E + +T+ K L R++ D LTGL RR + + +LR A + ++L Sbjct: 503 ERYSTVAEDITERKRREQALRYRASHDGLTGLYNRRHTQRALERELRLAARTGHPVSVVL 562 Query: 164 LDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEAC 223 D+D FK VNDT+GH GD VLR LA + RD + V R+GGEEF++++ ++ A Sbjct: 563 FDLDHFKRVNDTHGHNAGDQVLRQLAGLVTERVRDTDIVGRWGGEEFLLVLPGTDETGAG 622 Query: 224 RAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 + + V + +T++ G ++A +E D + R D+A+Y K GRNR Sbjct: 623 QLAEVLRAYVAEARFPIPD---PVTISLGYAQAGADEGADALFKRVDQALYAAKANGRNR 679 >UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clostridium thermocellum RepID=A3DEY5_CLOTH Length = 550 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 6/196 (3%) Query: 96 NHWQDAHFDAFQEGLLSFTAALTDYKIYL-LTIRSNMDVLTGLPGRRVLDESFDHQLRNA 154 N + D + A+ + ++Y + + +D LTG+ R E + NA Sbjct: 354 NAFDDNNLRLLNIIGQQVGIAMENVELYQRMHEMATIDSLTGIYNRLYFQERLREEFANA 413 Query: 155 EP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFII 212 + +L L ++DID FK NDT+GHL GD VL+ +A + R + + RYGGEEF+I Sbjct: 414 KKENYDLSLAIMDIDHFKRFNDTFGHLFGDKVLKHIAHLMKKSLRSGDIIARYGGEEFVI 473 Query: 213 IVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE--EPLDVVIGRAD 270 ++ + +EA R+ +V I ++TV+ GVS +PE ++ AD Sbjct: 474 LLPRTSVKEAYDKVERLRNIVAKTTIKDELVEASVTVSFGVSS-YPEFANTESELLKTAD 532 Query: 271 RAMYEGKQTGRNRCMF 286 A+Y+ K++GRN Sbjct: 533 NALYDAKESGRNCVRI 548 >UniRef50_B8GTD8 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTD8_THISH Length = 451 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 91/163 (55%), Gaps = 2/163 (1%) Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDV 183 ++ +D LTG+P R+ DE + + N L L++ D+DRFKL+ND+YGH GD Sbjct: 288 RKQALIDQLTGVPNRQAFDERLAQEYSRWKRFNTPLALIMWDVDRFKLINDSYGHKAGDK 347 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 V+R +A L R+ + V RYGGEEF++++ A+ ++A +I + Sbjct: 348 VIRAVAQKLKERIRETDMVARYGGEEFVMLLTGASGQDALAIAEKIRAEIAGLGFHFRGE 407 Query: 244 HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + IT++AG++ + + ADRA+YE K TGRNRC+ Sbjct: 408 RVPITISAGIALFAEGDTPETAFDNADRALYEAKNTGRNRCVL 450 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 5/188 (2%) Query: 104 DAFQEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NL 159 D EG++ +T+ K L + DVLTG+ RR E ++ A L Sbjct: 390 DNRPEGVIGVMLDITERKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPL 449 Query: 160 YLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAND 219 ++LDID FK +NDT+GH +GDV ++ LA R + + R GGEEF I++ + Sbjct: 450 VALMLDIDHFKRINDTHGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDL 509 Query: 220 EEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQ 278 + A R+ Q V I G + T + GV+ + +D ++ RAD A+Y K+ Sbjct: 510 DGALLVAERLRQAVAAIRIPAELGTVAFTTSIGVAERLEGDATIDTILSRADMALYSAKR 569 Query: 279 TGRNRCMF 286 +GRN+ Sbjct: 570 SGRNKVAV 577 >UniRef50_B5ZG65 Diguanylate cyclase with PAS/PAC sensor n=4 Tax=Proteobacteria RepID=B5ZG65_GLUDA Length = 464 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 59/173 (34%), Positives = 84/173 (48%), Gaps = 4/173 (2%) Query: 119 DYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQ---LRNAEPLNLYLMLLDIDRFKLVNDT 175 L + +D LTGLP RR E + LR ++++DIDRFK +ND Sbjct: 285 RRMEQELHALARVDHLTGLPNRRAFTEGMEQAWQMLRGGVSRGGAVLMIDIDRFKTINDR 344 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 YGH GD VLR +AT L + R + R GGEEF + +EA R R+ Q + Sbjct: 345 YGHAAGDAVLRHVATVLMATLRATDFTGRMGGEEFAACLPDTGLDEAGRIAERLRQAIAG 404 Query: 236 HAITHSEGHINITVTAGVSRAF-PEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 + I +TV+ G+S+ + D + RAD A+Y K+ GR+R F Sbjct: 405 TPVPFESHSIALTVSIGISKMRLADAGGDDALSRADMALYSAKENGRDRVAFA 457 >UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5K2_HYDS0 Length = 901 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 7/206 (3%) Query: 82 MHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRR 141 + + ++L + N H L T K + S D LTG+ RR Sbjct: 699 IMKQDKNIVLKLNMNRINQNHETLILCILQDITEESMIIKYF--EELSIKDDLTGICNRR 756 Query: 142 VLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDY 199 L++ + L A+ N L +++ DID FK +ND+YGH IGD VL+T+A + S R Sbjct: 757 CLEDKLEEYLTLAKRYNRPLSVIMFDIDFFKHINDSYGHDIGDKVLKTIANIVLSNIRAT 816 Query: 200 ETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE 259 + + RYGGEEF+II E+A ++ + ++N +IT + GV+ E Sbjct: 817 DILARYGGEEFVIISPETTLEDAKALAEKLRKEIENFLFEEG---FSITCSFGVTSLNQE 873 Query: 260 EPLDVVIGRADRAMYEGKQTGRNRCM 285 + + ++ R D A+Y+ K+ GRNR + Sbjct: 874 DTKETILKRVDEALYKAKREGRNRVV 899 >UniRef50_A1TUA2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TUA2_ACIAC Length = 591 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 7/210 (3%) Query: 82 MHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRR 141 ++ + + +++E + + + E + L + D LTGL RR Sbjct: 378 LNRSFQSMTASLLEREQELSRLNTSLENQVRERTLALHQANQELENLAVRDPLTGLYNRR 437 Query: 142 VLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDY 199 DE+ L LM++D D FK VNDT+GH GD VLR LA + R Sbjct: 438 RFDEALQAYTARCRELGHRFALMIVDADHFKRVNDTHGHQTGDAVLRHLAGVITGCVRST 497 Query: 200 ETVYRYGGEEFIIIVKAA-NDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAF- 257 + + R+GGEEF++++ + EE +I V + G ++TV+ G++ Sbjct: 498 DFIARFGGEEFVVLMPEPRDREEGRFVAEKIRLAVGHTPFP---GVGHLTVSIGLAFCHG 554 Query: 258 PEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 EPL ++ RAD+A+Y+ K+ GR+R Sbjct: 555 GGEPLATILERADKALYQAKEEGRDRVCVA 584 >UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Idiomarina baltica OS145 RepID=A3WMD3_9GAMM Length = 689 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 6/239 (2%) Query: 50 GLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEG 109 G + G ++ G E+ + + +D A Sbjct: 451 GKLEKGEVREYKGRQVLSPRHSFEQWQQDVDGYAPIWTEIQIEAAKTLAEDLAIGASAYQ 510 Query: 110 LLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDID 167 + LT+ L + D LT + R ++++ + +++ + L ++LLDID Sbjct: 511 IEQLNQELTEA-NQRLEHLVHTDALTQVWNRYHMEQTLEEEVKRCKRHGRDLAVILLDID 569 Query: 168 RFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGV 227 FK VND YGH +GD VL+ ++ + W R + R+GGEEF+II + E A + Sbjct: 570 HFKRVNDDYGHDVGDKVLKLISEAIHQWLRSSDVFGRWGGEEFLIIAPETDLESANQLAE 629 Query: 228 RICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 R+ + + N + +T + GV+ P E + ++ RAD A+Y+ K++GRN Sbjct: 630 RLRRRLSNLQF---DKVGQVTASFGVAELLPSEDRNSLVKRADNALYQVKESGRNSVEV 685 >UniRef50_Q21VE2 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21VE2_RHOFD Length = 398 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 5/202 (2%) Query: 93 IVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLR 152 I + + A E L + ++ L ++ D LTGL RR L ++ ++ Sbjct: 195 IEQRKQAEQSLKAANEELHLRVFEVQRLQVE-LHEQAIHDPLTGLYNRRYLSDALAREII 253 Query: 153 NAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEF 210 A+ +L ++ DID FK VND+YGHL GD VL +A+ L R + RYGGEEF Sbjct: 254 QAKRANSSLTFVMADIDHFKFVNDSYGHLAGDEVLVQVASLLKKHARGSDIACRYGGEEF 313 Query: 211 IIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA-FPEEPLDVVIGRA 269 +++ + E A + I Q +I H +I + ++ GV+ + + +I +A Sbjct: 314 LLVFPGTSLELAHKRAEEIQQNCAALSIQHEGKNIAVMLSFGVAAYPDHGQQWEQIIVKA 373 Query: 270 DRAMYEGKQTGRNRC-MFIDEQ 290 D+A+Y+ K GRN+ +F DE+ Sbjct: 374 DKALYQSKCNGRNQVTIFRDEE 395 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 12/246 (4%) Query: 56 RWIDHLGPLDN-------DELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQE 108 WI+ P D LP L + G + + A + Sbjct: 1005 HWIEAKSPNLFCQHISQGDFLPAESLCVPMMAQGNTLGLLYIATLTPGQLTPAKRQLART 1064 Query: 109 GLLSFTAALTDYKIYLL-TIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLD 165 + AL + K+ +S D LTGL RR L+ES + ++ A ++ ++++D Sbjct: 1065 VVEHLAIALANVKLQEKFKAQSMRDALTGLFNRRYLEESLEQEIHRARRNHYSVGIVMID 1124 Query: 166 IDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRA 225 ID FK ND +GH GD VL+T+A L R + RYGGEE +I+ A+ + Sbjct: 1125 IDHFKRFNDQFGHDAGDEVLKTVARLLQGSIRSSDIACRYGGEELTLILPEASLSDTQAR 1184 Query: 226 GVRICQLVDNHAITHSEGHI-NITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTGRNR 283 +I ++++ + + + +IT + GV+ E L+ V+ AD A+Y+ K GRNR Sbjct: 1185 SEQIRYMIEHLQLHYENQSLGSITASFGVACFPEHGETLEAVLRIADTALYQAKALGRNR 1244 Query: 284 CMFIDE 289 + + Sbjct: 1245 VVCATD 1250 >UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=2 Tax=Desulfovibrio RepID=B8DIR5_DESVM Length = 474 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 5/186 (2%) Query: 103 FDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLY 160 F A G++ + +L + D LT LP R L+E F ++ A+ Sbjct: 291 FFALLVGVVLWYNRRLKRMNAVLERLARTDPLTDLPNRSRLNELFRREVERAQRYRRPFS 350 Query: 161 LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDE 220 +++LDID FK VND GHL GD L+ A + R +TV R+GGEEF+++ E Sbjct: 351 IVILDIDHFKRVNDELGHLAGDRTLQVFAGVVRDSVRGTDTVGRWGGEEFLVLCPETTAE 410 Query: 221 EACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTG 280 EA + R+ + G I+ T++AGV+ + +D ++ RAD A+Y K G Sbjct: 411 EAVQLAERLRGSLRATQF--EGGRIH-TLSAGVAAFREGDSVDTLLHRADTALYRAKNGG 467 Query: 281 RNRCMF 286 R+R Sbjct: 468 RDRVEV 473 >UniRef50_B8GC13 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Chloroflexus RepID=B8GC13_CHLAD Length = 728 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 56/165 (33%), Positives = 86/165 (52%), Gaps = 4/165 (2%) Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGD 182 L ++ +D LTGL RR L+ S +L A+ + L + ++DID FK ND YGH GD Sbjct: 549 LREQAIIDPLTGLYNRRYLETSLSRELHRAQREQIPLTVAMIDIDHFKQFNDQYGHDAGD 608 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 +LR LA R + R+GGEEF++I+ N A + ++V I + Sbjct: 609 TLLRELAVIFREHLRQSDLACRFGGEEFVLILPGVNQATAQTRLQHLREVVQQRQIIFAG 668 Query: 243 GHIN-ITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCM 285 + IT++ G EE +++ RAD A+Y K++GRNR + Sbjct: 669 APLRPITISIGYFTCEKEEIEPHILLQRADAALYAAKRSGRNRVI 713 >UniRef50_C6BZS4 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZS4_DESAD Length = 635 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 96/184 (52%), Gaps = 5/184 (2%) Query: 109 GLLSFTA-ALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLML 163 L+S TA +T+ K + + ++ D LTG RR + +L LYLM+ Sbjct: 447 RLVSITAHDITEQKEMLEEVKRLASTDYLTGAHNRRHFMSRAETELDRLTRYGGELYLMM 506 Query: 164 LDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEAC 223 LDID FK +NDTYGH +GDVVL+ + R + R GGEEF ++ + + A Sbjct: 507 LDIDHFKNINDTYGHSVGDVVLKEMVKCCIETLRTSDVFGRLGGEEFAALLVHGSIDSAI 566 Query: 224 RAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 + R+ + +++ + + +TV+ G++ +E +++ + AD+ +Y+ K+ GRNR Sbjct: 567 QVAERLREAIEDMEVRIGRHVVKLTVSIGLTMVCADEDIEIALKHADKCLYQAKEQGRNR 626 Query: 284 CMFI 287 + Sbjct: 627 VVSY 630 >UniRef50_A9B3D1 Diguanylate cyclase n=2 Tax=Bacteria RepID=A9B3D1_HERA2 Length = 1774 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 59/167 (35%), Positives = 90/167 (53%), Gaps = 3/167 (1%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQ--LRNAEPLNLYLMLLDIDRFKLVNDTYGHLIG 181 + + D LT + RR E + Q L + L M+LD+D FK VND+YGH +G Sbjct: 1608 QVQRLAITDSLTQVSNRRHFFELAERQWILTCSSDHPLSAMMLDVDHFKRVNDSYGHSVG 1667 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D+VLRT+A + R + + RYGGEEF I++ + A R+ + NH I H Sbjct: 1668 DLVLRTVADLCRANLRPSDLLGRYGGEEFAILLPDTDVSAALTIAERLRVAIANHVINHE 1727 Query: 242 EGHINITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCMFI 287 + IN+TV+ GV+ ++ + ++ RADR +Y K+TGR+R Sbjct: 1728 QASINLTVSIGVTGLSKDDNSVASLLDRADRGLYIAKETGRDRVTMA 1774 >UniRef50_A5D1G5 Hypothetical signaling protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D1G5_PELTS Length = 343 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 9/218 (4%) Query: 75 MDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVL 134 +++ ++ + +L EN ++ Q+ +S L + S D L Sbjct: 119 IEALAENFNKMSLKLK-EERENLFRQVALLEEQKREISVQKEELARVNSRLELLSITDPL 177 Query: 135 TGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYL 192 TG RR + + +L A L L L+++DID FK VNDT+GH +GD VL+ + L Sbjct: 178 TGAYNRRYIISQLEQELAVAARHGLPLSLIMIDIDHFKKVNDTHGHQVGDEVLKDVVKVL 237 Query: 193 ASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAG 252 + R + + RYGGEEF++I +EA R+ V + G + +T++ G Sbjct: 238 SGCIRTADVLGRYGGEEFVVIAPFTGFQEALVLAERLRDTVSRWPFETTYGFLKLTISLG 297 Query: 253 VSRAFPEEP------LDVVIGRADRAMYEGKQTGRNRC 284 V+ +E +D ++ RAD MY+ K GRN Sbjct: 298 VTTFNGKEEHYHNSLIDRLLARADEEMYKAKAQGRNLV 335 >UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJ36_DESVM Length = 698 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 105/264 (39%), Gaps = 18/264 (6%) Query: 40 KPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQ 99 + + H L F LD+ +P + + ++ + W Sbjct: 407 TINVLNQHGAALLGFRDVAHARAVLDDSVIPLYAEPMDRQAMLDDLTAGEVVTGLRLRWY 466 Query: 100 DAHFDAF-------------QEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLD 144 +A + SF +TD L + D LTG+ RR Sbjct: 467 RRGGEAIWVSLYARRTGTPEAPEVESFFLDVTDQVEDTLRLEQLATTDELTGVANRRHFM 526 Query: 145 ESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETV 202 + + A+ L ++LLD D FK +NDT+GH GD+VLR + + R+ + + Sbjct: 527 ARLEDEAARAQRYGRPLSVLLLDADHFKSINDTWGHEAGDMVLRHITDVMGLSLRENDLI 586 Query: 203 YRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFP-EEP 261 R GGEEF +++ E A R RI V++ + + + TV+ G + + Sbjct: 587 GRLGGEEFGVLLPETAQERALRTAERIRAAVEDAPVAVRDVWVGCTVSVGAAEYRGANDS 646 Query: 262 LDVVIGRADRAMYEGKQTGRNRCM 285 LD +I RAD + K+ GRNR Sbjct: 647 LDDLIRRADHMLMRAKEEGRNRVC 670 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 6/199 (3%) Query: 94 VENHWQDAHFDAFQEGLLSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQL 151 VE H + FD + +LS +TD K L + D LTG+ RR + ++ Sbjct: 779 VEIHAKLLDFDG-KPVVLSIARDITDRKRLEQALMREATTDPLTGIRNRRQFFVDAEREM 837 Query: 152 RNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEE 209 A L +++LD+DRFK VND +GH GD VL R+ + + R GGEE Sbjct: 838 GRAVRYGRPLAVLMLDLDRFKRVNDRFGHHAGDAVLMGCVQACQQALRETDILGRLGGEE 897 Query: 210 FIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEP-LDVVIGR 268 F ++ + ++A A R+ + V+ + S + TV+ G++ P + LD ++ R Sbjct: 898 FAAVLLETDLDDALAAAERLRRAVEEMDVPFSGQRLRCTVSIGLALRGPGDGALDDILRR 957 Query: 269 ADRAMYEGKQTGRNRCMFI 287 AD A+Y K+ GRNR M Sbjct: 958 ADSALYAAKEAGRNRVMLA 976 >UniRef50_B1X1R3 Putative adenylate cyclase n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1X1R3_CYAA5 Length = 592 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 6/170 (3%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFD--HQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIG 181 + D LT +P R D+ + L + L+L D+D FK NDTYGH G Sbjct: 414 KWKYLATFDTLTKVPNRLYFDKILEQTRLLHHLSRKQTSLILCDVDHFKQYNDTYGHPAG 473 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D L+ +A + + R + V RYGGEEF II+ + +EA + RI + V + I+H+ Sbjct: 474 DRCLQKVAKEIRTAIRRTDFVARYGGEEFAIILPRTDRQEAKKIAQRILEKVISLNISHN 533 Query: 242 EGHIN--ITVTAGVSRAFPEEPLDV--VIGRADRAMYEGKQTGRNRCMFI 287 + +T++ G+S F ++ L +I +AD+A+Y+ KQ GRNR + Sbjct: 534 TSLTSDYVTISCGISSLFLQDQLSTKRLINQADKALYQAKQEGRNRVIVY 583 >UniRef50_C6CQG0 Diguanylate cyclase n=7 Tax=Enterobacteriaceae RepID=C6CQG0_DICZE Length = 491 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 48/168 (28%), Positives = 92/168 (54%), Gaps = 2/168 (1%) Query: 123 YLLTIRSNMDVLTGLPGRRVLDESFD--HQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 L + + D LTGL R+ + F ++ + ++L+D+D FK +ND YGH + Sbjct: 324 RRLELMATTDKLTGLMNRQAFEYVFRTLRIKQSTQHRTFSIILIDLDYFKKINDQYGHHV 383 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VL A + R ++ R+GGEEF++++ + +A +I + + ++H Sbjct: 384 GDRVLVRTARLIQRTIRKTDSACRWGGEEFVLLLADCSRSQAHFIAEKIRRAIRFALVSH 443 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 IN+T++ G++ + P E +D ++ RAD A+Y+ K+ GR++ + + Sbjct: 444 QHQVINLTISCGIAESHPGESIDHLVQRADNALYQAKRQGRDQAVIAE 491 >UniRef50_C8X2T0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X2T0_DESRD Length = 315 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 103/244 (42%), Gaps = 5/244 (2%) Query: 46 NHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDA 105 N + L F + ++ + +D+ H +M L + Sbjct: 69 NSVFKLGHFSFFAQNVHS-YIFPFKSEKYLDTNHDYMQQSVSLAPLRDDQGRVSHVCVQV 127 Query: 106 FQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLML 163 E + L + +D LTGL RR L ES +L + + + Sbjct: 128 ADETDTVLARERMEEARCQLEEMTRLDPLTGLANRRHLMESLSRELSRCGRSGSQVTVAI 187 Query: 164 LDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEAC 223 LD+D FK+VNDTYGHL GD VL A L S R Y+ V RYGGEEF +I+ + + Sbjct: 188 LDLDHFKVVNDTYGHLCGDQVLIHTAKRLESMLRQYDLVGRYGGEEFCVILPETSLKSGF 247 Query: 224 RAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQTGR 281 R+ + V + + + I +TV+AG + E D ++ AD+ +Y+ K GR Sbjct: 248 EIVERLRKAVAATPVPYEDLEIPLTVSAGCACTEDMECLSTDALLLSADQYLYKAKDAGR 307 Query: 282 NRCM 285 + Sbjct: 308 DCVQ 311 >UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUF5_9AQUI Length = 283 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 6/164 (3%) Query: 122 IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHL 179 I L ++ D LTG RR ++E ++ + L ++ +D+D FK +NDTYGH Sbjct: 120 IRELRFLADTDSLTGFYNRRKIEEILAKEIERSRRYGNPLSVLFIDVDNFKELNDTYGHK 179 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 GD VLR +A + S R + V R+GGEEF++I+ + + A R RI + V+ Sbjct: 180 SGDEVLRKIAEIIKSELRRTDYVGRFGGEEFMVILPETDSQSALRVAERIRKRVEREDFK 239 Query: 240 HSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 +TV+ GV+ + L+ + R DRAMY K+ G+NR Sbjct: 240 TG----KVTVSVGVTELKEGDDLNTLFNRVDRAMYLAKERGKNR 279 >UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M6_MAGSA Length = 498 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 117/265 (44%), Gaps = 23/265 (8%) Query: 40 KPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELM----LAIVE 95 P+ T S+G + + PLD E + + N LM LA + Sbjct: 236 TPQPTGQPSFGEQRSSASFVAVSPLDGRERIF------GLSKLENIPLILMVGYDLAGIL 289 Query: 96 NHWQDAHFDAFQEGLLSFTAALTDYKIYL--------LTIRSNMDVLTGLPGRRVLDESF 147 W LL A + YL L +++ D LTG+P RR L Sbjct: 290 TEWSKRAGQLAAGFLLLVALATLGLRSYLTTVRQREELRRQADTDPLTGVPNRRHLMSVA 349 Query: 148 DHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRY 205 +H+L L L ++DID FK +NDT+GH GD V++ LA +A+ R+ +T R Sbjct: 350 EHELARTLRYGGALALFMVDIDHFKAINDTWGHPTGDRVIQVLAAAMAASAREQDTAGRL 409 Query: 206 GGEEFIIIVKAANDEEACRAGVRICQLVDN--HAITHSEGHINITVTAGVSRAFPEE-PL 262 GGEEF ++ + E A R+ + V+ A+ + TV+ GV+ + + Sbjct: 410 GGEEFAAVLPETDLEGAAIMAERLREAVEAITSALDDQGQPVRFTVSIGVAAIQLGDGSV 469 Query: 263 DVVIGRADRAMYEGKQTGRNRCMFI 287 + ++GRADRA+Y K GRNR Sbjct: 470 EDILGRADRALYAAKHGGRNRVEMA 494 >UniRef50_A4XVW9 Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XVW9_PSEMY Length = 638 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 5/209 (2%) Query: 86 GRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDE 145 R L L + + L L++ + L + D LTGL R+ L E Sbjct: 426 ARHLELQTQISESLEQRVQERTATLQETLHQLSNANLR-LAELNRRDGLTGLFNRQTLSE 484 Query: 146 SFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVY 203 AE ++ +++LD+D FK VND YGHL GD LR A + R + + Sbjct: 485 ELTRACARAERGKQSVAILMLDLDHFKQVNDRYGHLAGDACLRHAAQRIQQRLRSSDLLA 544 Query: 204 RYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPL- 262 R+GGEEF+ ++ + + A ++ + H + + I ++++ G+ P +P Sbjct: 545 RFGGEEFVALLDNTSLDGALDLAEQLRDDLARHPCPYQQHSIPLSLSIGLHAGVPHDPSC 604 Query: 263 -DVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 + + ADRA+Y K GRN+ + + + Sbjct: 605 GEHWLDLADRALYRAKAGGRNQVVSYEAK 633 >UniRef50_C7HZC5 Diguanylate cyclase n=1 Tax=Thiomonas intermedia K12 RepID=C7HZC5_THIIN Length = 400 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 5/182 (2%) Query: 111 LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLR--NAEPLNLYLMLLDIDR 168 L + L + L + D LTGL RR + + + + L ++++DID Sbjct: 210 LIYGGMLMARLVRRLHDLALKDPLTGLLNRRAAQQLLEREWASYRHKDLPFCVLMIDIDH 269 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK +ND YGH +GD VL LAT L TR + V R GGEEF++ + A A R Sbjct: 270 FKRINDEYGHAVGDRVLTGLATLLREGTRPTDHVARMGGEEFLVFLPQTELPSAQAAAER 329 Query: 229 ICQLVDNHAITHSEGHINITVTAGVSRAFPEEPL-DVVIGRADRAMYEGKQTGRNRCMFI 287 + Q + E ++IT++ GV++A E+ D ++ RADRA+Y K GRNR Sbjct: 330 LRQHTAAWVLQPEE--LSITISIGVAQAAAEDSAFDDLLIRADRALYAAKSAGRNRVHLA 387 Query: 288 DE 289 D Sbjct: 388 DP 389 >UniRef50_D2R0A0 Diguanylate cyclase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0A0_9PLAN Length = 352 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 4/225 (1%) Query: 62 GPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGL--LSFTAALTD 119 + +D Y +++ + M + + + QE L T A Sbjct: 62 SGVASDVSQYRAVIERFAKGMSDSKTTPAVPADLVTHVMQANEQLQEKLTIAESTLARQA 121 Query: 120 YKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLL--DIDRFKLVNDTYG 177 +I + + D LTGL RR D+ F +L + LML+ D+D FK VND YG Sbjct: 122 SEINQIMNEARTDALTGLANRRAFDDEFARRLSQWKRHGTALMLVLVDVDHFKPVNDQYG 181 Query: 178 HLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHA 237 H GD VL+ L L++ RD + V RYGGEEF I++ + E RI Q + + Sbjct: 182 HQAGDAVLKQLGKLLSAAVRDTDLVARYGGEEFAILLVDSGIEGGAITIARIQQAIASST 241 Query: 238 ITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 H + IT + G+++ + +I RAD A+Y K GRN Sbjct: 242 FRHEGVALRITASFGLAQPSASDDQKQLIARADEALYAAKHGGRN 286 >UniRef50_A8ZVJ7 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVJ7_DESOH Length = 410 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 12/248 (4%) Query: 47 HSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAI-VENHWQDAHFDA 105 H+ LC G ++ HL ++P ++ SA L+ +E ++ A+ A Sbjct: 162 HAVALCG-GLFLLHLLIFPWFQMPTDLIVHSALVVFSVAVISLLGNYRIEREFRRAYLRA 220 Query: 106 FQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLML 163 + + + + + L + D LTGL RR D D + R+A E L++ L+ Sbjct: 221 LKMKIDARQLEGLNRQ---LEEMAVSDPLTGLFNRRHFDAHLDAEWRSAVREQLSISLIF 277 Query: 164 LDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEA 222 +DID FKL ND +GH GD+ L+ +A L R + RYGGEEF++++ N ++A Sbjct: 278 IDIDHFKLYNDNHGHQAGDLCLKQIADTLTENVHRPGDACVRYGGEEFVVLLANTNMDQA 337 Query: 223 CRAGVRICQLVDNHAITHSEGHIN--ITVTAGVSRAFP--EEPLDVVIGRADRAMYEGKQ 278 +I + AI H + +TV+ GV+ P ++ + ++ +AD+++Y K Sbjct: 338 LYVAQKIQSHLQALAIPHGYSPVAGEVTVSMGVASMVPDRDDTPEDLLEKADKSLYRAKD 397 Query: 279 TGRNRCMF 286 GRNR Sbjct: 398 AGRNRICV 405 >UniRef50_B0TJ24 Periplasmic/7TM domain sensor diguanylate cyclase n=4 Tax=Shewanella RepID=B0TJ24_SHEHH Length = 623 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 7/203 (3%) Query: 94 VENHWQDAHFDAFQEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQ- 150 +E + QE L AL + LT ++ +D LTG+ R D + Sbjct: 418 IEARSSEKLAKMVQERTLELEIALRELNEANQKLTEQTRIDSLTGVKNRASFDRRILAEG 477 Query: 151 -LRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGE 208 + + L +++LDIDRFKL+ND+YGHL GD LR +A L R + V R+GGE Sbjct: 478 RISRRQQAPLSILMLDIDRFKLINDSYGHLAGDQALRVIADQLKQILKRPTDLVSRFGGE 537 Query: 209 EFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSR--AFPEEPLDVVI 266 EF II+ + A + I +++ I I +TV+ GVS EE +++ Sbjct: 538 EFAIILPNTDKIGAQQVAETIRKVISKLPICWGGNRIRLTVSIGVSSEIITSEEHTTLLL 597 Query: 267 GRADRAMYEGKQTGRNRCMFIDE 289 +AD+A+Y+ K GRN+ Sbjct: 598 EQADKALYQAKNDGRNQVKLYSP 620 >UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTU2_DESBD Length = 339 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 7/219 (3%) Query: 72 VRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNM 131 V+ H+ R+L +V + + + +L T L + + L+ S Sbjct: 114 VKDEAGTITHIWGMARDLTRFLVSQNALVHLNEQLEAKILQRTRELEEA-NHRLSELSLT 172 Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTG+ RR D + + + L L++LDID FK ND YGH GD LR +A Sbjct: 173 DGLTGIANRRRFDAALAEEWSRSARTGSTLALIMLDIDHFKKYNDHYGHQQGDDCLRRVA 232 Query: 190 TYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI-NI 247 L S R + V RYGGEEF +I+ A R+ + V+N + H + + Sbjct: 233 EVLRSSARRQGDLVSRYGGEEFCMILPDTALPGAFEIAERLRREVENMDMPHVLSDVGRV 292 Query: 248 TVTAGVSRAFP--EEPLDVVIGRADRAMYEGKQTGRNRC 284 T + GV+ + P ++ RAD ++Y+ K GRN Sbjct: 293 TASMGVAASMPCKAMSPAELLRRADESLYQAKSEGRNCV 331 >UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRD6_THISH Length = 464 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 8/184 (4%) Query: 107 QEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLL 164 QE LL A L ++ D LTG+ RR L E D ++ +E L L+ L Sbjct: 286 QEALLQVQEA-----NRKLEQLASTDALTGVANRRQLVERADMEVPRSERHGAPLSLLCL 340 Query: 165 DIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACR 224 D+D FK +ND YGHL GD VL+ +A + R + + R GGEEF +++ + A Sbjct: 341 DLDHFKRINDDYGHLAGDEVLKQVAEAIQQSLRPSDLLARVGGEEFHVLLPDTDLAGARD 400 Query: 225 AGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNR 283 RI ++ I +++TV+ G ++ P+ + + AD +Y+ K GRNR Sbjct: 401 VAERIRVKLEGLDIPVQGVVLHVTVSVGCAQLGPDGADMKSLTHTADERLYQAKALGRNR 460 Query: 284 CMFI 287 + Sbjct: 461 VVIA 464 >UniRef50_A8IQ43 Putative diguanylate cyclase (DGC) n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IQ43_AZOC5 Length = 566 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 12/233 (5%) Query: 72 VRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLS-FTAALTDYKIY------- 123 +R + A + + + ML + + H LL T+A T Y+++ Sbjct: 332 LRQLALAAEEIGRDPKITMLPRLRGNADVMHLSYALRSLLRRLTSAETRYEMFSRKHEQD 391 Query: 124 --LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN-LYLMLLDIDRFKLVNDTYGHLI 180 L ++ D LTGL RR D L +A L +++ DID FK VNDTYGH Sbjct: 392 VAALKELADTDPLTGLLNRRSFLAMADVALDSAHATGQLGILMADIDHFKQVNDTYGHAA 451 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VL+ +A R ++ + R+GGEEF+ +++ + R+ + V + Sbjct: 452 GDAVLKHVADTFVRTLRAHDHLARFGGEEFVALLQDTDIAGMQALAERVREAVAATKVVF 511 Query: 241 SEGHINITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCMFIDEQNV 292 + I +T++ G + A ++ + VI RAD A+YE K +GRNR + E ++ Sbjct: 512 EDQAIAVTISIGAALAHDQDRDMHKVIERADLALYEAKNSGRNRIVISPEPSL 564 >UniRef50_C0QFG9 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFG9_DESAH Length = 339 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 6/211 (2%) Query: 80 QHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIR--SNMDVLTGL 137 + M + R + I E +FQ + S + L + L + + D LTGL Sbjct: 125 EDMDSLARTMDKIIQEAKALVQTGKSFQGRMASSSQELASLRKKLDVSKKDAETDALTGL 184 Query: 138 PGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTR 197 RR + L++ + L+++DID FK VNDTYGHL+GD +L+ LA L T+ Sbjct: 185 LNRRGFESRLHPLLKDPQSC-FCLIMIDIDHFKRVNDTYGHLVGDSILKALANLLKQQTK 243 Query: 198 DYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI---THSEGHINITVTAGVS 254 + + R+GGEEFII++ E+A I + + + IT++ GV+ Sbjct: 244 GKDCLARFGGEEFIILLPETRLEQAGAVAEDIRKKLAAQEWKQRKTGKPMGKITISLGVT 303 Query: 255 RAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + P E +I R D A+Y K+ GRNR + Sbjct: 304 QYRPNESEVTLIHRVDTALYTAKRNGRNRVV 334 >UniRef50_B2UI26 Diguanylate cyclase with GAF sensor n=2 Tax=Ralstonia pickettii RepID=B2UI26_RALPJ Length = 348 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 66/227 (29%), Positives = 111/227 (48%), Gaps = 17/227 (7%) Query: 74 LMDSAHQHMHNCGRELM---LAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSN 130 ++D + REL+ + VE+ +++ Q +L+ ++ + S Sbjct: 131 VLDKKPRSFDQAERELLNDLASWVESGFRERELSETQRSILT--------ELQIARHESL 182 Query: 131 MDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 D + G+ RR E + +A L L+++D+D FK VNDTYGH +GD VL + Sbjct: 183 TDPMLGIWNRRAAMELLTRECGHAMRYGQPLSLLVVDVDHFKRVNDTYGHPVGDAVLVEI 242 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 A L +R + V RYGGEEF++++ +A R+ V++ I E +I + Sbjct: 243 ARTLRVNSRPIDAVGRYGGEEFLVVLPDTTTLQASDIAERLRSAVESLEIATPEANIRSS 302 Query: 249 VTAGVSRAFPEE---PLDVVIGRADRAMYEGKQTGRNRCMFIDEQNV 292 ++ G++ PE+ +I RAD A+ K+ GRNR +F D Q V Sbjct: 303 ISVGLASCEPEKNLCTPTDLIMRADAALLAAKRLGRNRVIF-DGQPV 348 >UniRef50_C7LVZ4 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVZ4_DESBD Length = 483 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 4/164 (2%) Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDV 183 R++ D LT + R D +++ + L LM++D+D FK +NDTYGH GD+ Sbjct: 309 KARADHDGLTRISNRHHFDIRLREEMKRHQRHQDELSLMMIDLDYFKSINDTYGHQAGDM 368 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VL+ + L + R+ + RYGGEEF++I+ +++A R+ + + Sbjct: 369 VLQEVGKILNNTLRESDFPARYGGEEFVVILPQTREDQAWILAERLRSQIGQTFFRSQKK 428 Query: 244 HINITVTAGVSRAFP--EEPLDVVIGRADRAMYEGKQTGRNRCM 285 +T + G++ P P + ++ AD A+Y+ K GRN Sbjct: 429 RFRVTASIGIAGIKPCALTPPETLLRNADTALYQAKTNGRNMVC 472 >UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TWE2_ACIAC Length = 377 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 6/228 (2%) Query: 68 ELPYVRLMDSAHQHMHNCGRELMLAI-VENHWQDAHFDAFQEGLLSFTAALTDYKIYLLT 126 + P +D+A + L L + ++ A L L Sbjct: 150 DRPLHPDIDTATSLLCILALTLFLTVFAHTSYRRAMEQQKSNDRLREQFEEIRALQDQLQ 209 Query: 127 IRSNMDVLTGLPGRRVLDESFDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 ++ D LTGL RR LD + ++ A+ L L LM++DID FK +NDT+GH GD + Sbjct: 210 EQAVRDPLTGLYNRRHLDATLASEIARCGAQGLPLSLMMIDIDHFKRINDTHGHAAGDAM 269 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 L+ LA L R + R GGEEF++++ A + + + + H Sbjct: 270 LQALAQLLQRHVRVRDLACRLGGEEFVLLLPETPLAVARERAEALREAFEALQVRHDPEV 329 Query: 245 INITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNRCMFIDEQ 290 ++ T++ GV+ AFP+ + AD A+Y K GRNR + DE Sbjct: 330 LSATLSCGVA-AFPQHARQPLALTASADEALYAAKMQGRNRVVVQDEP 376 >UniRef50_Q2IXE2 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Alphaproteobacteria RepID=Q2IXE2_RHOP2 Length = 457 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 5/163 (3%) Query: 128 RSNMDVLTGLPGRRVLDESFD--HQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVL 185 + D LTGL RR ++ + + L LM+LDID FK +NDTYGH GD VL Sbjct: 291 MAITDGLTGLHNRRYMESHLATLAEQAGSRGKPLALMILDIDFFKAINDTYGHDAGDDVL 350 Query: 186 RTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG-- 243 R A + R + RYGGEEF+I++ + + A R+ + + +G Sbjct: 351 REFAVRIKKSIRGIDLACRYGGEEFVIVMPETDLQVAQMVAERLRRAIAGEPFAIEKGTK 410 Query: 244 HINITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 I +T++ G+S E + ++ RAD A+Y K GRNR + Sbjct: 411 RIAVTISIGLSTLERKGEAVRDLLKRADTALYRAKHDGRNRVV 453 >UniRef50_C1ZLY6 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZLY6_PLALI Length = 650 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 9/215 (4%) Query: 86 GRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDE 145 E ++ + + + ++ + + + L ++ D LTG+ R+ DE Sbjct: 299 ANEQLVQLALREHVASTQASIRQHVAEQEKRELETRNRELQQQALHDPLTGVHNRKFFDE 358 Query: 146 SFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVY 203 ++ L ++ +D+D FK VNDT+GH GD VL+ +A + R +T+ Sbjct: 359 VLLREVHRCVRAAQPLAVIFIDVDHFKNVNDTFGHQFGDQVLKRVAQIFSETVRVADTLA 418 Query: 204 RYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFP--EEP 261 R+GGEEF+++V +++ R RI + V+ A + ITV+ G + A P E Sbjct: 419 RFGGEEFVVLVSQPSEKGVERLAERIRENVEKEAFRFGSTPVKITVSVGAAIAIPRRGET 478 Query: 262 --LDVVIGRADRAMYEGKQTGRNRCM---FIDEQN 291 D +I AD +YE K+ GRNR + +DE++ Sbjct: 479 GIGDRLIAVADECLYEAKRNGRNRTILRHVMDERD 513 >UniRef50_A8UY33 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY33_9AQUI Length = 345 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 5/198 (2%) Query: 93 IVENHWQDAHFDAFQEGLLSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQ 150 + E + F + L + + L + +N+D LTGL RR + + Sbjct: 147 MHEVRGLKSVNRKFIQRLEEQRGEIERLREELRRVKEEANIDPLTGLRNRRSFERALSEF 206 Query: 151 LRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGE 208 R+ + ++++D+D FK +NDTYGHL GD VL+ + L ++ R + R GGE Sbjct: 207 FRDFKKFGYPFSVIMIDLDNFKQINDTYGHLAGDKVLKEIGNILRNYLRAKDVPARTGGE 266 Query: 209 EFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIG 267 EF II+ EEA R+ +++ N+ + H + IN T + GV+ + E + ++ Sbjct: 267 EFTIILPGITREEALMVAERLRKVIANYTVEHEDKKINPTASFGVAEVNEQVETPEDLLR 326 Query: 268 RADRAMYEGKQTGRNRCM 285 AD +Y+ K+ G+N + Sbjct: 327 LADENLYKAKRRGKNTVV 344 >UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SM80_AERS4 Length = 432 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 119/247 (48%), Gaps = 16/247 (6%) Query: 55 GRWIDHLGPLDNDELP--YVRLMDSA---HQHMHNCGRELMLAIVENHW-QDAHFDAFQE 108 G+ ++ L PL Y R ++ + MH + L + + Q+ Sbjct: 179 GKRLETLLPLRFRSNHESYFRAFSNSPINSRPMHARASVMGLRRDGSEFPQEVTIAKINL 238 Query: 109 GLLSFTAALTD------YKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LY 160 G + A+ + L + + D LTG+ RR DE +++ + + Sbjct: 239 GQTTEMTAILRDISERARLVEELKVAATTDPLTGIANRRRFDELVKQEVQRCQRFGHTMS 298 Query: 161 LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDE 220 L+LLDID FK VNDT+GH GD + +L +A R+ + + R+GGEEFII++ + + Sbjct: 299 LLLLDIDHFKQVNDTHGHQQGDQAILSLVRRIAKQLREVDILGRWGGEEFIILLPETSLD 358 Query: 221 EACRAGVRICQLVDNHAITHS-EGHINITVTAGVSRAF-PEEPLDVVIGRADRAMYEGKQ 278 A + RI + + + + I +TV+ G+S + P++ +D ++ RAD A+Y K+ Sbjct: 359 LAWASAERIRLAIASESHPLGADIEIPLTVSIGISASQGPQDNVDNMVRRADTALYLAKK 418 Query: 279 TGRNRCM 285 GRN C+ Sbjct: 419 QGRNCCI 425 >UniRef50_B6BJ77 Signal transduction response regulator-chey like receiver and ggdef domain n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJ77_9PROT Length = 534 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 121/239 (50%), Gaps = 11/239 (4%) Query: 58 IDHLGPLDNDELPYVRLMDSAHQHMH-----NCGRELMLAIVENHWQDAHFDAFQEGLLS 112 I + + ++ +V+ ++ + + ++L ++ + F+ + + S Sbjct: 299 IKDISNKEIGKILFVKNLNFYTDKLDMIKNISIVSGIVLLLLSLYMMRKIFNNYINIVNS 358 Query: 113 FTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFK 170 + + L + K L N+D LT + R+ ++ +L+ A+ N L L++ DID FK Sbjct: 359 YQSKL-EIKNRTLLKLVNVDHLTKIHNRKSIETILIKELKRAKRYNHELSLIIFDIDNFK 417 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 +NDTYGH IGD VL+++A +A+ R+ + R+GGEEFI+I + + A +I Sbjct: 418 NINDTYGHNIGDKVLKSIAKVVANSIRESDYFGRWGGEEFIVISTETSMDNALLVAEKIR 477 Query: 231 QLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 + + + +E IT + GV+ E+ ++ AD A+Y+ K +G+NR +F + Sbjct: 478 ESISTYDFEEAE---KITCSIGVAEYTSEDTHQSIVHNADTALYKAKHSGKNRVIFHEH 533 >UniRef50_A8TQW5 GGDEF domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQW5_9PROT Length = 360 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 10/215 (4%) Query: 81 HMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIR--SNMDVLTGLP 138 MH L + E +A L + + L+ R ++ D LTGL Sbjct: 131 EMHRLVGSL---VHETRVMEARNARLHGRLERSAEEIARLRKSLVATRREASTDGLTGLA 187 Query: 139 GRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT 196 R + A + L L++ DID FK NDTYGH++GD VLR + L Sbjct: 188 NRMQFERELRSAAAKAMEDGTTLCLLMADIDHFKTFNDTYGHMVGDQVLRLVGRVLIEAI 247 Query: 197 RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV-DNHAITHSEGH--INITVTAGV 253 R + R+GGEEF++++ +EA R RI + + + H + S G +T++ GV Sbjct: 248 RPGDLAARFGGEEFVVVLPECRLDEAARIAERIRERIGEKHVVRRSSGDDLGTVTLSLGV 307 Query: 254 SRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + P E + +I RAD +Y+ KQ GRNR +D Sbjct: 308 TAYQPGEVVGQLIERADTGLYDAKQAGRNRVAVVD 342 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 5/193 (2%) Query: 100 DAHFDAFQEGLLSFTAALTDYKIYL-LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP-- 156 DA + A+ + + L +S D LTGL RR L+E ++ + Sbjct: 1420 DAKLQIARTVAEQVALAIANLNLRETLQYQSIRDPLTGLYNRRYLEEVLTQEIARGQRRQ 1479 Query: 157 LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKA 216 + ++++D+D FK NDTYGH +GD VL+T+ L R + RYGGEE +I+ Sbjct: 1480 HPISVVMIDVDYFKRFNDTYGHDVGDYVLQTIGAMLKETVRGSDIACRYGGEEMTLILPE 1539 Query: 217 ANDEEACRAGVRICQLVDNHAITHSEGHI-NITVTAGVSRA-FPEEPLDVVIGRADRAMY 274 ++ EE I + + + ++ H+ +T++ G++ +I AD A+Y Sbjct: 1540 SSLEETTIKAEEIREAIAQLTLAYNGQHLGKLTISLGIAGFPKHGTTGIALIQAADAALY 1599 Query: 275 EGKQTGRNRCMFI 287 K GRN+ + Sbjct: 1600 RAKAAGRNQVVVA 1612 >UniRef50_A0LBU1 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LBU1_MAGSM Length = 438 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 5/177 (2%) Query: 117 LTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVND 174 L KI L + D LTG R L E F +++ +E + +++LDID FK VND Sbjct: 261 LIQRKINDLEKKVYHDPLTGAANRSRLYEKFHEEMKRSERYGSPVSILMLDIDHFKRVND 320 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 TYGH GD VL + + R + V R+GGEEF++I A I +L+ Sbjct: 321 TYGHNAGDEVLLEVVKRMQGHVRVTDLVGRWGGEEFLLIAPETVLGAALEVAENIRRLIG 380 Query: 235 NHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 +T + GV + E ++ + R D A+Y K+ GR+R D Sbjct: 381 QIPF---GQVGRVTCSIGVGQLAKGESMNTCLERVDAALYRAKKQGRDRVEMADPPP 434 >UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDS7_9PROT Length = 750 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 6/167 (3%) Query: 123 YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLI 180 L + D LT + R + ++ L L+ LDID FK +ND +GH Sbjct: 588 KQLETMAFYDKLTNIYNRAKFKNILKEFIEYSKRYKTPLSLIFLDIDYFKKINDNFGHEK 647 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD+VL+ + R+ + R+GGEEF+I++ + A +I +++H Sbjct: 648 GDLVLKEMVKVAKLSLRESDVFGRWGGEEFLILLPNTDINGAKIVAEKIRDAIESHDF-- 705 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 I +TV+ GV++ ++ ++ + RAD A+Y+ K+ GRNR + Sbjct: 706 --DGIKVTVSLGVTQLKEDDTIESFVNRADIALYQAKKEGRNRVVVF 750 >UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXY8_CHRSD Length = 608 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 72/225 (32%), Positives = 112/225 (49%), Gaps = 14/225 (6%) Query: 79 HQHMHNCGRELMLAIVENHW--------QDAHFDAFQEGLL-SFTAALTDYKI-YLLTIR 128 H + G E +L +++ HW + F +G+ +L++ ++ L Sbjct: 384 HLCLPLKGSEGILGVLQVHWLPERDADDDNDARVDFAKGVAEDMVLSLSNVRLREQLEEA 443 Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 S D LTGL RR LDE+ +L AE + L +++LDID FK +ND YGH +GD L Sbjct: 444 SIRDALTGLYNRRFLDETLARELARAERQAVPLCVLMLDIDHFKPINDDYGHALGDRALV 503 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS-EGHI 245 +A L + R + V RYGGEEF+II+ A + A R G + + V + + I Sbjct: 504 AVAELLNAHVRRDDIVCRYGGEEFVIIMPGAGLDAAQRRGDHLRRCVSALDVEANVPAPI 563 Query: 246 NITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 +TV+ G++ + + ++ AD A+YE KQ GRNR Sbjct: 564 RLTVSLGLACYPQHGDNAEHLLHSADMALYEAKQGGRNRLTIASP 608 >UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A0L4D8_MAGSM Length = 464 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 14/224 (6%) Query: 75 MDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVL 134 + + + + + + L ++ E+ Q D ++ L L K L D L Sbjct: 242 LVTEAEALRSQTQSLATSLSESQAQ---LDLTRKQLQQVQDDLKKAKEESL-----TDPL 293 Query: 135 TGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYL 192 T + RR L +S + L L+++D+D FK +NDTYGH +GD VL+ +A + Sbjct: 294 TQVANRRALFQSLTRETARTRRYGEPLSLIIIDLDHFKKINDTYGHPVGDRVLKEVAGHA 353 Query: 193 ASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAG 252 + RD +T+ RYGGEEF+ ++ +A +I V ++I+ + G Sbjct: 354 RALLRDSDTLARYGGEEFVALLPETTLPQAMEKAEQIRLSVAAMRFKLKGESLSISASLG 413 Query: 253 VSRAFPEEPLD----VVIGRADRAMYEGKQTGRNRCMFIDEQNV 292 V++ D + RAD+A+Y K GRN + D Sbjct: 414 VAQLDDGASQDANNEAFVHRADQALYRAKSGGRNCVIQADPTPA 457 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P31129 Uncharacterized protein ydeH n=55 Tax=Enterobact... 342 1e-92 UniRef50_B1ELX2 Diguanylate cyclase (GGDEF) domain protein n=3 T... 339 8e-92 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 282 1e-74 UniRef50_A4U5Q6 GGDEF domain protein n=2 Tax=Magnetospirillum Re... 280 3e-74 UniRef50_Q0EXC9 Signaling protein with a GGDEF domain n=1 Tax=Ma... 280 5e-74 UniRef50_A4W9G8 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638... 278 1e-73 UniRef50_C6D9C2 Diguanylate cyclase n=5 Tax=Pectobacterium RepID... 277 2e-73 UniRef50_C9RM68 Diguanylate cyclase n=1 Tax=Fibrobacter succinog... 277 5e-73 UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 274 2e-72 UniRef50_C9XU93 Putative uncharacterized protein n=1 Tax=Cronoba... 271 1e-71 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 270 4e-71 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 269 9e-71 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 268 1e-70 UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium... 268 2e-70 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 267 4e-70 UniRef50_C6BU46 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 266 4e-70 UniRef50_D2TII3 Diguanylate cyclase YddV n=13 Tax=Enterobacteria... 266 4e-70 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 266 4e-70 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 266 4e-70 UniRef50_B4SPL2 Diguanylate cyclase n=3 Tax=Stenotrophomonas Rep... 266 7e-70 UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 265 1e-69 UniRef50_A1U2H0 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 264 2e-69 UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoe... 264 3e-69 UniRef50_Q4KKJ4 Diguanylate cyclase, putative n=5 Tax=Pseudomona... 263 4e-69 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 263 5e-69 UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepI... 263 7e-69 UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alterom... 262 8e-69 UniRef50_A6VSB0 Diguanylate cyclase n=2 Tax=Gammaproteobacteria ... 262 1e-68 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 261 1e-68 UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 261 1e-68 UniRef50_C8Q5F4 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 261 2e-68 UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodi... 261 2e-68 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 261 2e-68 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 261 2e-68 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 261 2e-68 UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 261 3e-68 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 260 3e-68 UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrery... 260 4e-68 UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curviba... 260 4e-68 UniRef50_Q320T0 Diguanylate cyclase yddV n=41 Tax=Enterobacteria... 260 6e-68 UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hy... 260 6e-68 UniRef50_B7LMM6 Putative uncharacterized protein n=3 Tax=Enterob... 260 6e-68 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 259 7e-68 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 259 7e-68 UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 259 8e-68 UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 259 9e-68 UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q... 259 1e-67 UniRef50_Q2SPL3 Response regulator containing a CheY-like receiv... 258 1e-67 UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=P... 258 1e-67 UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 258 1e-67 UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desul... 258 1e-67 UniRef50_Q1MZ89 Response regulator containing a CheY-like receiv... 258 1e-67 UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammap... 258 2e-67 UniRef50_B2A6L1 Response regulator receiver modulated diguanylat... 258 2e-67 UniRef50_C1DXV0 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 258 2e-67 UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter di... 258 2e-67 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 258 2e-67 UniRef50_Q47FN5 Response regulator receiver modulated diguanylat... 257 3e-67 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 256 5e-67 UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 256 5e-67 UniRef50_A1KC37 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 R... 256 6e-67 UniRef50_Q2BRK2 Signaling protein with a GGDEF domain n=1 Tax=Ne... 256 6e-67 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 256 6e-67 UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 256 7e-67 UniRef50_Q216C5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodo... 256 7e-67 UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4... 256 7e-67 UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thioox... 256 8e-67 UniRef50_Q1K485 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 256 9e-67 UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgar... 255 9e-67 UniRef50_Q1MYJ5 Response regulator containing a CheY-like receiv... 255 1e-66 UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 255 1e-66 UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 255 1e-66 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 255 1e-66 UniRef50_Q6AMZ3 Putative uncharacterized protein n=1 Tax=Desulfo... 255 1e-66 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 255 2e-66 UniRef50_C1SIQ7 Diguanylate cyclase (GGDEF) domain-containing pr... 255 2e-66 UniRef50_A1S6F8 Diguanylate cyclase n=2 Tax=Shewanella RepID=A1S... 255 2e-66 UniRef50_A8UZ69 Putative uncharacterized protein n=1 Tax=Hydroge... 254 2e-66 UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 254 2e-66 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 254 2e-66 UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 254 2e-66 UniRef50_Q2RLY1 Diguanylate cyclase (GGDEF domain) n=1 Tax=Moore... 254 2e-66 UniRef50_A8UV88 Putative uncharacterized protein n=1 Tax=Hydroge... 254 2e-66 UniRef50_Q2BKU0 Sensory box protein n=1 Tax=Neptuniibacter caesa... 254 3e-66 UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax... 254 3e-66 UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 254 3e-66 UniRef50_C5BK03 Ggdef domain protein n=1 Tax=Teredinibacter turn... 254 3e-66 UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms R... 254 3e-66 UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteoba... 254 3e-66 UniRef50_B6BHU8 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 254 3e-66 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 254 3e-66 UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfo... 253 4e-66 UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 253 4e-66 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 253 5e-66 UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepI... 253 5e-66 UniRef50_B1KK06 7TM domain sensor diguanylate cyclase n=1 Tax=Sh... 253 5e-66 UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing pr... 253 6e-66 UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 253 6e-66 UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 253 7e-66 UniRef50_B9Z1A1 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 253 7e-66 UniRef50_C6P3V9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 253 7e-66 UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 253 7e-66 UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthono... 253 7e-66 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 253 8e-66 UniRef50_B9Z5H6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 252 8e-66 UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 252 8e-66 UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnic... 252 9e-66 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 252 9e-66 UniRef50_C4XH70 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 252 9e-66 UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 252 1e-65 UniRef50_C8X2T0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 252 1e-65 UniRef50_C0QHN1 Putative diguanylate cyclase (GGDEF domain prote... 252 1e-65 UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus L... 252 1e-65 UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece ... 252 1e-65 UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 252 1e-65 UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID... 251 1e-65 UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing pr... 251 2e-65 UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromob... 251 2e-65 UniRef50_A1AK83 Response regulator receiver modulated diguanylat... 251 2e-65 UniRef50_Q1ZGY5 GGDEF domain protein n=1 Tax=Psychromonas sp. CN... 251 2e-65 UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 251 2e-65 UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix oren... 251 2e-65 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 251 2e-65 UniRef50_D2L2K3 Diguanylate cyclase with GAF sensor n=1 Tax=Desu... 251 2e-65 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 251 2e-65 UniRef50_B6BJC3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 251 2e-65 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 251 2e-65 UniRef50_C1D915 GGDEF domain protein n=1 Tax=Laribacter hongkong... 251 2e-65 UniRef50_A5D1G5 Hypothetical signaling protein n=1 Tax=Pelotomac... 251 2e-65 UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnet... 251 2e-65 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 251 3e-65 UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein... 251 3e-65 UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromob... 251 3e-65 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 250 3e-65 UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 250 3e-65 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 250 4e-65 UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 250 4e-65 UniRef50_A6VEW2 Ggdef domain protein n=8 Tax=Pseudomonas RepID=A... 250 4e-65 UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 250 4e-65 UniRef50_B1HU26 Response regulator receiver domain protein (CheY... 250 4e-65 UniRef50_Q21DN5 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 250 5e-65 UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 T... 250 5e-65 UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 250 5e-65 UniRef50_C7RTE2 Diguanylate cyclase with hemerythrin-like metal-... 250 5e-65 UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 250 5e-65 UniRef50_C5V0N5 Diguanylate cyclase n=2 Tax=Gallionella ferrugin... 250 5e-65 UniRef50_Q21VE2 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 250 6e-65 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 250 6e-65 UniRef50_C0QQG6 Signal transduction response regulator n=1 Tax=P... 250 6e-65 UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 250 6e-65 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 250 6e-65 UniRef50_Q30QW7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 250 6e-65 UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales Rep... 250 6e-65 UniRef50_UPI0001AF5018 diguanylate cyclase, putative n=1 Tax=Pse... 250 7e-65 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 249 7e-65 UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 249 7e-65 UniRef50_Q2BP61 GGDEF/HAMP domain protein n=1 Tax=Neptuniibacter... 249 7e-65 UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 249 7e-65 UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydroge... 249 8e-65 UniRef50_Q6AL41 Putative uncharacterized protein n=1 Tax=Desulfo... 249 8e-65 UniRef50_A6X556 Diguanylate cyclase n=1 Tax=Ochrobactrum anthrop... 249 8e-65 UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzer... 249 8e-65 UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3... 249 9e-65 UniRef50_C1DCC5 GGDEF domain protein n=1 Tax=Laribacter hongkong... 249 9e-65 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 249 9e-65 UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 249 9e-65 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 249 1e-64 UniRef50_Q0A8W9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 1e-64 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 1e-64 UniRef50_C0QEH9 Signal transduction family protein (GGDEF domain... 249 1e-64 UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 249 1e-64 UniRef50_A8TN49 Putative uncharacterized protein n=1 Tax=alpha p... 249 1e-64 UniRef50_Q7NSG5 Putative uncharacterized protein n=1 Tax=Chromob... 248 1e-64 UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthono... 248 1e-64 UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 248 1e-64 UniRef50_B8FCK6 Response regulator receiver modulated diguanylat... 248 1e-64 UniRef50_Q47Y21 GGDEF domain protein n=1 Tax=Colwellia psychrery... 248 1e-64 UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliil... 248 1e-64 UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 248 1e-64 UniRef50_B7RW73 GGDEF domain protein n=1 Tax=marine gamma proteo... 248 1e-64 UniRef50_A8UWP4 Response regulator containing a CheY-like receiv... 248 1e-64 UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (... 248 1e-64 UniRef50_B4S1M7 GGDEF domain protein n=1 Tax=Alteromonas macleod... 248 2e-64 UniRef50_C0QJ78 Signal transduction family protein (GGDEF domain... 248 2e-64 UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n... 248 2e-64 UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=N... 248 2e-64 UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 248 2e-64 UniRef50_A4BD76 GGDEF domain protein n=1 Tax=Reinekea blandensis... 248 2e-64 UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7... 248 2e-64 UniRef50_C1SHV7 Diguanylate cyclase (GGDEF) domain-containing pr... 248 2e-64 UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 248 2e-64 UniRef50_A0LBU1 Response regulator receiver modulated diguanylat... 248 2e-64 UniRef50_A6FD11 Sensory box/GGDEF family protein n=1 Tax=Moritel... 248 3e-64 UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Breviba... 247 3e-64 UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 247 3e-64 UniRef50_B2V7F9 Diguanylate cyclase n=2 Tax=Sulfurihydrogenibium... 247 3e-64 UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein... 247 3e-64 UniRef50_B3E3B5 Diguanylate cyclase with GAF sensor n=1 Tax=Geob... 247 3e-64 UniRef50_B0CDD6 Diguanylate cyclase (GGDEF domain) n=2 Tax=Bacte... 247 3e-64 UniRef50_Q2BQL8 Probable two-component response regulator n=1 Ta... 247 3e-64 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 247 3e-64 UniRef50_A0YZR1 Putative diguanylate cyclase (GGDEF domain) n=2 ... 247 3e-64 UniRef50_A0YNV2 Regulatory component of sensory transduction sys... 247 3e-64 UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=... 247 3e-64 UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clos... 247 3e-64 UniRef50_A1VD57 Diguanylate cyclase n=3 Tax=Desulfovibrio vulgar... 247 3e-64 UniRef50_A4CF43 Putative uncharacterized protein n=1 Tax=Pseudoa... 247 4e-64 UniRef50_Q2W1M0 Response regulator containing a CheY-like receiv... 247 4e-64 UniRef50_A8ESJ8 GGDEF domain protein n=1 Tax=Arcobacter butzleri... 246 5e-64 UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 246 5e-64 UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptu... 246 5e-64 UniRef50_A9B3D1 Diguanylate cyclase n=2 Tax=Bacteria RepID=A9B3D... 246 5e-64 UniRef50_Q2BQN9 Diguanylate cyclase, putative n=1 Tax=Neptuniiba... 246 5e-64 UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 246 5e-64 UniRef50_Q5SHT9 GGDEF domain protein n=2 Tax=Thermus thermophilu... 246 5e-64 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 246 5e-64 UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 246 5e-64 UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=... 246 6e-64 UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG8... 246 6e-64 UniRef50_Q6ARR6 Putative uncharacterized protein n=1 Tax=Desulfo... 246 6e-64 UniRef50_Q30WR5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desul... 246 6e-64 UniRef50_A4BIU7 Response regulator containing a CheY-like receiv... 246 6e-64 UniRef50_A3J8Q2 Two-component response regulator protein n=1 Tax... 246 6e-64 UniRef50_Q2SUR3 GGDEF domain protein n=54 Tax=Burkholderiaceae R... 246 7e-64 UniRef50_Q6AJ00 Putative uncharacterized protein n=1 Tax=Desulfo... 246 7e-64 UniRef50_Q1JWQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 246 7e-64 UniRef50_A8ZVJ7 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 246 7e-64 UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8F... 246 7e-64 UniRef50_B6BJ77 Signal transduction response regulator-chey like... 246 7e-64 UniRef50_Q1K1S4 Diguanylate cyclase n=4 Tax=Bacteria RepID=Q1K1S... 246 8e-64 UniRef50_C5T761 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 246 8e-64 UniRef50_B6BJC6 GGDEF domain/pas/pac sensor domain protein n=1 T... 246 8e-64 UniRef50_C0QSI7 Diguanylate cyclase with GAF sensor n=1 Tax=Pers... 246 8e-64 UniRef50_C9Y711 Putative uncharacterized protein n=1 Tax=Curviba... 246 8e-64 UniRef50_B9QXQ9 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 246 9e-64 UniRef50_A1WTZ7 Response regulator receiver modulated diguanylat... 246 9e-64 UniRef50_Q1N6U5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 246 9e-64 UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxyd... 246 9e-64 Sequences not found previously or not previously below threshold: UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepI... 255 2e-66 UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain prote... 253 4e-66 UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica R... 253 4e-66 UniRef50_Q0F205 Response regulator containing a CheY-like receiv... 252 1e-65 UniRef50_UPI0001C3940A response regulator receiver modulated dig... 249 9e-65 UniRef50_Q3A8D4 Putative sensory transduction system, regulatory... 248 1e-64 UniRef50_B7K273 Response regulator receiver modulated diguanylat... 248 2e-64 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 247 3e-64 UniRef50_A1K7E0 GGDEF-domain containing protein n=1 Tax=Azoarcus... 246 4e-64 UniRef50_D1AZG2 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 246 6e-64 UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvest... 246 6e-64 UniRef50_A1RG31 Diguanylate cyclase n=3 Tax=Shewanella RepID=A1R... 246 6e-64 >UniRef50_P31129 Uncharacterized protein ydeH n=55 Tax=Enterobacteriaceae RepID=YDEH_ECOLI Length = 296 Score = 342 bits (877), Expect = 1e-92, Method: Composition-based stats. Identities = 296/296 (100%), Positives = 296/296 (100%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH Sbjct: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY Sbjct: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI Sbjct: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH Sbjct: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV 296 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV Sbjct: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV 296 >UniRef50_B1ELX2 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Enterobacteriaceae RepID=B1ELX2_9ESCH Length = 296 Score = 339 bits (870), Expect = 8e-92, Method: Composition-based stats. Identities = 265/296 (89%), Positives = 284/296 (95%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 MIKKTTEIDAILL+LNKAIDAHYQWLV+MFHSVVARDASKPEITDNHS+GLCQFG+WI+H Sbjct: 1 MIKKTTEIDAILLDLNKAIDAHYQWLVNMFHSVVARDASKPEITDNHSHGLCQFGQWIEH 60 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 LGPLDNDELPYVRLM+SAHQHMH+CGRELMLAI+EN WQ+AHF FQEGLLSFTA LTDY Sbjct: 61 LGPLDNDELPYVRLMNSAHQHMHDCGRELMLAIIENRWQEAHFAKFQEGLLSFTATLTDY 120 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 KIYLLTIRSNMD+LTGLPGRRVLDESFD+QL NAEPL+LYLMLLDIDRFKLVNDTYGHL Sbjct: 121 KIYLLTIRSNMDILTGLPGRRVLDESFDYQLSNAEPLSLYLMLLDIDRFKLVNDTYGHLT 180 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GDVVLRTLAT LA+WTRDYETVYRYGGEEFIII+KA ND+EAC AGVRICQLVDNHAI H Sbjct: 181 GDVVLRTLATSLANWTRDYETVYRYGGEEFIIIIKAQNDDEACHAGVRICQLVDNHAIAH 240 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV 296 GHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI++Q+VI+RV Sbjct: 241 PGGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFINKQDVISRV 296 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 282 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 5/197 (2%) Query: 93 IVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLR 152 I+++ + + +L F+ + + S D LTGL + +E +++ Sbjct: 269 ILKSFYTNITLSFLLAVILGFSVYIFLKDLEKFRYLSETDRLTGLYNKGKFNEVLQREIQ 328 Query: 153 NAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEF 210 A+ L L++ DID FK +NDTYGH +GD VL+ LA + R + R+GGEEF Sbjct: 329 RAKRYKRPLSLIIFDIDHFKKINDTYGHKVGDEVLKALAKLIKKNIRKTDFAARWGGEEF 388 Query: 211 IIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRAD 270 +I+ N E A + ++ Q V+ + +T++ GV++ P+E + I RAD Sbjct: 389 VILAPETNVEGAKKLAEKLRQAVETYKFPTVG---KVTISLGVAQLEPDEKPEDFIVRAD 445 Query: 271 RAMYEGKQTGRNRCMFI 287 A+Y+ K+ GRNR Sbjct: 446 MALYKAKEGGRNRVEIA 462 >UniRef50_A4U5Q6 GGDEF domain protein n=2 Tax=Magnetospirillum RepID=A4U5Q6_9PROT Length = 288 Score = 280 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 6/287 (2%) Query: 4 KTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGP 63 K E+ A L + + H+ WL + +V+ R + + C F +W + G Sbjct: 2 KPEEVFASLTAFQQGLAGHFDWLHRWYQAVLNR--QDGVKFPDPAACACPFDQWHKNAGG 59 Query: 64 LDNDELPYVRLMDSAHQHMHNCGRELM-LAIVENHWQDAHFDAFQEGLLSFTAALTDYKI 122 + P + + H +H+ +L A + ++ +LSF A + Sbjct: 60 TPFADFPDFAQLAAEHDEVHDKAAQLSGRAQAGLTVTTSDYETLMMSVLSFGATAQSLER 119 Query: 123 YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLI 180 + + +D LTGL R+ + + A L L L DID FK +ND +GH Sbjct: 120 EVWKALATVDPLTGLSNRQSMRTHLMGERDRAIRQKLPLSLALADIDHFKKINDGFGHSQ 179 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VLR +A L + R Y+ VYRYGGEEF++ + N E RI + +T Sbjct: 180 GDKVLRAVAAVLKATVRPYDVVYRYGGEEFLLCLPGTNAENGALVLERIRAAIAALELTD 239 Query: 241 S-EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 I +T T G++ + +D I ADRA+Y+GK GRN+ + Sbjct: 240 DRGTPIPVTATFGIAEINADLSVDDAIELADRALYDGKLGGRNKVVI 286 >UniRef50_Q0EXC9 Signaling protein with a GGDEF domain n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC9_9PROT Length = 308 Score = 280 bits (716), Expect = 5e-74, Method: Composition-based stats. Identities = 81/288 (28%), Positives = 136/288 (47%), Gaps = 4/288 (1%) Query: 6 TEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLD 65 E+D IL+ +++AID H QW + +++ + + +Y C+FG+W Sbjct: 16 KELDGILIQIDQAIDNHDQWYAQLERTLICKLPPDQRDLEKDAYKQCRFGQWYYQYSSPA 75 Query: 66 NDELPYVRLMDSAHQHMHNCGRELM-LAIVENHWQDAH-FDAFQEGLLSFTAALTDYKIY 123 P ++ HQ +H L+ +++ E D H FD F L L K Sbjct: 76 LRSHPTFASIEHEHQLLHERVSGLLQVSMAEAKPIDVHVFDEFANTLQRMRLLLFSLKHE 135 Query: 124 LLTIRSNMDVLTGLPGRRVLDESF--DHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIG 181 + +N+D LTG R + +L + + +LD+D FK VND YGH +G Sbjct: 136 IEGDLNNLDPLTGAYNRFGMMAFLHEQQELVARGVNSCSIAMLDLDFFKQVNDQYGHKMG 195 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D VL ++A+ L R Y+ ++RYGGEEF+ + E A R+ + V++ I Sbjct: 196 DHVLTSIASTLLKGLRPYDKLFRYGGEEFVAVFPNTAVESALLVAERVRKYVEDTIIEID 255 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 + + ITV+ G++ +++ + +AD AMY KQ GRN+ + Sbjct: 256 KLPVRITVSVGIAAIDANTSVEISVEQADIAMYTAKQNGRNQVKLWEN 303 >UniRef50_A4W9G8 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638 RepID=A4W9G8_ENT38 Length = 298 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 120/288 (41%), Positives = 181/288 (62%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 M K +IDA + +LN + DAH++WL+++ V +RD P++T + ++ C FG W++ Sbjct: 1 MNSKFKKIDATVRDLNHSTDAHFKWLINILRFVASRDVLLPDLTCDDAHNFCDFGHWLNT 60 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 D Y+ + H H+H REL+ AI + +A FD F+ LL+FTA+++ Y Sbjct: 61 QLQDDIAGRNYLLDIKDKHIHVHKMCRELIKAIEHDECNNAPFDDFETALLAFTASVSRY 120 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 K +LL +R++ D LTGLP RR+LDES+D + LYL+LLD+D FK +ND YGHLI Sbjct: 121 KAHLLQLRTSYDALTGLPLRRILDESYDSMNKALGDEGLYLLLLDVDHFKKINDNYGHLI 180 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VLR+LA L + R E+VYRYGGEEFII+++A +D EA A R+ ++++ Sbjct: 181 GDAVLRSLALNLENNIRRAESVYRYGGEEFIILLQAHSDREATEAAERLRRVIETSETVS 240 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + IT ++G++R E L V+ RAD A+Y+GKQ+GRN + I+ Sbjct: 241 GGHRVKITFSSGLTRVHRGETLREVLERADVALYKGKQSGRNCTILIN 288 >UniRef50_C6D9C2 Diguanylate cyclase n=5 Tax=Pectobacterium RepID=C6D9C2_PECCP Length = 471 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 126/293 (43%), Gaps = 4/293 (1%) Query: 2 IKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHL 61 +++ + +IL N + + L++ ++ + A+ ++ +FG W +H Sbjct: 179 NEESYRLFSILENASMERERQNASLLNWENAFIFSVATGTPLSSIQDLSDSEFGLWFNHK 238 Query: 62 GPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYK 121 G + +R + S R + A + L Sbjct: 239 GKSSFSNIQGIRTIASIITETDEYIRGYSTTALLTQQDYAPLLKAVRSKIYKINMLLGSL 298 Query: 122 IYLLTIR-SNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGH 178 + S D LT L RR L H++ A L + ++DID FK VNDTYGH Sbjct: 299 FDEVQKLESGKDTLTLLLNRRFLPTILRHEISLAMHSSTPLSIAMIDIDHFKTVNDTYGH 358 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 GD +L+ +A L TR+ + V+RYGGEEF+I++ A R+ + + +H I Sbjct: 359 AAGDNILKRIAEVLYESTRNSDYVFRYGGEEFMIVLIETPKVAAHTIIERLRKKIQDHPI 418 Query: 239 THSEGH-INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 G I +T++AG++ + +I AD A+Y+ K GRNR + E+ Sbjct: 419 HLQNGESITMTISAGIAVYSGHPDYECLIKAADDALYQAKANGRNRIEYAQEE 471 >UniRef50_C9RM68 Diguanylate cyclase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM68_FIBSS Length = 566 Score = 277 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 75/302 (24%), Positives = 131/302 (43%), Gaps = 16/302 (5%) Query: 5 TTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDN-HSYGLCQ-FGRWIDHLG 62 T ++ I L IDA + + ++ + +C+ IDH+ Sbjct: 262 TYDLGLIALQPKTEIDAMVSSVHHVSQIILFSSIIAILLVSLWQILIVCKPLNNLIDHIS 321 Query: 63 PL--------DNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFT 114 + + + + + + I E +AH D ++ + T Sbjct: 322 QITEGKLDIEEFKARSSQDEIGRLAKVFNQMHATIKRQIQE---LNAHRDMLEKEVKERT 378 Query: 115 AALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLV 172 L + L + S D LT LP RR + + + ++ A ++ +DID FK V Sbjct: 379 YEL-EQANKKLDLISRTDELTQLPNRRDMHRTIEKEVDRANRFKKAFSIIFIDIDHFKDV 437 Query: 173 NDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQL 232 NDTYGH GD VL+++A+ + S R Y+ + RYGGEEF+ ++ ++A R + Sbjct: 438 NDTYGHAAGDAVLKSVASTIRSLLRKYDVLARYGGEEFLTLLPETELKDAAHVAERFRKQ 497 Query: 233 VDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNV 292 ++N I I +T+T GV++ + I AD+A+YEGK+ GRNR + + Sbjct: 498 IENQTIFFGGQEIKVTITLGVAQFDSGLGAERCIQLADKALYEGKEHGRNRVILWTDDQA 557 Query: 293 IN 294 + Sbjct: 558 VE 559 >UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW02_9GAMM Length = 595 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 76/270 (28%), Positives = 115/270 (42%), Gaps = 15/270 (5%) Query: 23 YQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHM 82 Y W + M +++ + N + +G + VRL D ++ Sbjct: 326 YSWSLFMLGAILVALNKFDVLPSNMITEYS--MLFGTGVGTVVLSAALAVRLNDEKNKRY 383 Query: 83 HNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRV 142 H L Q + +E + T+AL + L SN D LTGL RR Sbjct: 384 HAQAEAL-------RVQRESVELLEERVKERTSALREA-NEKLEKLSNTDSLTGLNNRRS 435 Query: 143 LDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDY 199 LDE +++ L M++DIDRFK NDT+GH +GD L+ +A +AS R Sbjct: 436 LDELLAMEVKRTCRTGAPLSAMMMDIDRFKAFNDTHGHQVGDACLKAVAGVIASTAQRPS 495 Query: 200 ETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSR--AF 257 + V RYGGEEF +++ + A RI V+N T S + +T++ GVS Sbjct: 496 DVVGRYGGEEFCVLLPDTPLDGAQIIAERIRAAVENLDFTVSGQRVPVTISIGVSELTYC 555 Query: 258 PEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 + ++ AD A+Y K GRN Sbjct: 556 ASDSGKALVEAADEALYSAKSAGRNCVRLA 585 >UniRef50_C9XU93 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XU93_CROTZ Length = 301 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 154/288 (53%) Query: 7 EIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDN 66 +ID L LN A+ HY+W V+ + S+ C+F +W+ + Sbjct: 11 QIDLSLKELNYAVKLHYEWTGKFLELVLLGNEPDNTFMHPQSHLYCRFCQWMTAHQNIAF 70 Query: 67 DELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLT 126 L + + + H+ MH+ R L+ AI N A A+ E F A++ DY+ L++ Sbjct: 71 RYLHFAKAISETHKAMHDKARYLINAIASNQVDSAALYAYHEAQQQFVASIDDYRQQLIS 130 Query: 127 IRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 +R+ D LTGLP R++L E F+ +A L+L+++DIDRFK VNDTYGH GD VLR Sbjct: 131 LRNRHDTLTGLPLRQLLYEDFEFLHAHAREQTLWLLIIDIDRFKKVNDTYGHNAGDDVLR 190 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 +A + R E VYR+GGEEFI ++++ EEA AGVR+C+ +T +N Sbjct: 191 EVAQRFKNEARCCEQVYRFGGEEFIALLESHTQEEAREAGVRLCRCPGQLPLTLDGETLN 250 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVIN 294 +TVT G++ E L IGRAD AMY GK GRNRC+ + Sbjct: 251 VTVTGGLTCVRRNETLHEAIGRADDAMYFGKNNGRNRCILARADGTLE 298 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 5/201 (2%) Query: 88 ELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESF 147 L LA+ + ++ + + + L ++ D LTGL R +E Sbjct: 524 TLQLALTALFYFFGRERGVRDRVQQLLRSELQERAAALARQATTDPLTGLHNRLRFNEGL 583 Query: 148 DHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRY 205 +L L L++ D+D FK VND YGH GD VL L+ A+ R + + R+ Sbjct: 584 AQELARVRRTGQPLSLVMFDVDHFKEVNDRYGHPTGDQVLIRLSQTAAAQLRQTDLLARW 643 Query: 206 GGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVV 265 GGEEF I++ A+ A + +LV + ++T + GV+ P+E D + Sbjct: 644 GGEEFAILLVDADLHAAVEVAENLRRLVARTPF---DQIGSVTASFGVAECRPDESADSL 700 Query: 266 IGRADRAMYEGKQTGRNRCMF 286 + RAD A+Y K GRNR Sbjct: 701 LERADAALYRAKSNGRNRVEI 721 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 269 bits (688), Expect = 9e-71, Method: Composition-based stats. Identities = 73/266 (27%), Positives = 121/266 (45%), Gaps = 12/266 (4%) Query: 24 QWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMH 83 +WL+ + ++ A + + + + G W+ + VR + +H Sbjct: 455 EWLLQDWRALPVHPADRTVWELSLRDAMERRGDWMFEGRLV--LPGGEVRWWRGEARPVH 512 Query: 84 NCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVL 143 E+ G+++ T + + L + D LTGL RR Sbjct: 513 GGQSGAAELPEESGI-------VYCGIITDTTEHREAQ-ERLRQLATTDGLTGLANRRRF 564 Query: 144 DESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYET 201 E+ +H+++ L L+ +D+DRFK VNDT+GH +GD VLR LA + RD +T Sbjct: 565 LEALEHEVQRHRRYGTPLALISIDVDRFKRVNDTWGHAVGDEVLRALAGICRAEVRDVDT 624 Query: 202 VYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEP 261 V R GGEEF +++ EEA R+ V+ + + G + +T++ GVS + P + Sbjct: 625 VGRIGGEEFAVLLPDTAPEEAMAVAERLRAGVEAAPLLTTAGPLTVTLSLGVSASPPCDG 684 Query: 262 LDVVIGRADRAMYEGKQTGRNRCMFI 287 D ++ ADRA+Y K GRNR Sbjct: 685 ADTLLREADRALYRAKAGGRNRVERA 710 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 16/267 (5%) Query: 36 RDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYV---------RLMDSAHQHMHNCG 86 R + N + +F W H P Q + G Sbjct: 324 RLMEILGLNANLPEDIERFHHWAAHTHPDSITNTMMAIQAMKDNNSDRYQIEQQKLCGDG 383 Query: 87 RELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKI--YLLTIRSNMDVLTGLPGRRVLD 144 L + D ++ + +T+ K L ++ +D LTG+ RR Sbjct: 384 TYKWL-LNRGMVISRSSDGKPLRMIGTSTDITERKQLEEELKRQARIDFLTGVSNRRYFM 442 Query: 145 ESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETV 202 E + +++ L +LDID FK VNDTYGH GD+VL+ +A+ R+ + + Sbjct: 443 EQAEQEIQRTSRYDTPLSFFMLDIDLFKQVNDTYGHKSGDIVLKRMASVCRETLREIDII 502 Query: 203 YRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS-EGHINITVTAGVSR-AFPEE 260 R GGEEF I++ + +A R+ ++ + + I TV+ GV+ ++ Sbjct: 503 GRVGGEEFAILLPETDKAQAAEVAERLRSVLADEKVPTEAGAPIQFTVSIGVASRVSSQD 562 Query: 261 PLDVVIGRADRAMYEGKQTGRNRCMFI 287 +D+++ AD A+Y+ K+ GRNR Sbjct: 563 NIDMLLNLADEALYQAKKYGRNRVYIA 589 >UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium RepID=B2V5Y5_SULSY Length = 411 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 12/285 (4%) Query: 6 TEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLD 65 +I +L N AH + +S++ I N S+ C FG W+ G Sbjct: 135 KDIHLLLANP---FKAHINYFKDFLNSILDGG-----IFSNISHQSCAFGIWLKEKGKEY 186 Query: 66 NDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAF--QEGLLSFTAALTDYKIY 123 DE ++ + H+ HN ++D +F Q ++ Sbjct: 187 IDEEHILKDLKHLHKDFHNLIEIAESYKKNKKFKDLYFMILNIQNIMIWIGNEFLYLNTK 246 Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDH--QLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIG 181 + + ++D LTG RR + ++ + L + D+D FK +NDT+GHL G Sbjct: 247 FIKLEMSIDPLTGAFNRRGFEIIIQKLLEISQITDAPITLAMADLDYFKKINDTFGHLAG 306 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D L+ + R + V+R GGEEF+I++ ++A RI + ++ +++ + Sbjct: 307 DEALKHFVNIIKRNLRKSDYVFRIGGEEFLILLPNTELKDAVEIVERIRKDLEENSLHYD 366 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 I IT + G++ E+ ++ +I +AD +Y+ K++GRN+ + Sbjct: 367 GKEIKITASFGLAEVDKEKYINEIIKKADEKLYKAKESGRNKVVV 411 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 12/263 (4%) Query: 30 FHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGREL 89 +V A+ + G F + + G + H + + Sbjct: 409 IENVNLEAAAMIGASPEEIIGKSCFEIFPESKGLCLITAVGQEMDWAERILHRMDGSQLP 468 Query: 90 MLAIVENHWQDAHFDAFQEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESF 147 +L IV+ + E L+ LT+ K L S D LT RR E Sbjct: 469 VLKIVKRLRTKS-----GEKLIETFIDLTERKKLEEQLYRLSITDYLTQAYNRRYFTEML 523 Query: 148 DHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRY 205 + ++ A+ L++LDID FK VND +GH GD+VL+TLA + + R + + R+ Sbjct: 524 EREIERAKRTKMPFALIMLDIDHFKNVNDRFGHAAGDLVLKTLANLIKNRIRQTDCLARW 583 Query: 206 GGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVV 265 GGEEF+I++ E+A + + + I G +T + GV+ P + LD + Sbjct: 584 GGEEFVILLPNTPVEKAAGLAEELREQLSMLEIP---GVGRVTASFGVTGYCPGDTLDTL 640 Query: 266 IGRADRAMYEGKQTGRNRCMFID 288 + RAD+ +Y K +GRN F + Sbjct: 641 LMRADQMLYTAKASGRNCVRFSE 663 >UniRef50_C6BU46 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BU46_DESAD Length = 490 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 84/293 (28%), Positives = 138/293 (47%), Gaps = 11/293 (3%) Query: 6 TEIDA-ILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPL 64 IDA I +N +A + +W+ M +VVA + + + I G Sbjct: 201 KHIDAEIFINPGQAENVQSEWVELMIENVVALSGMEVSSYNMSETVPVGSNQMIYSPGAG 260 Query: 65 DNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL 124 LP V + + C R + LA + +A + L+ + A+ K Sbjct: 261 RILALPLVARGEKFGCLVMLCERNIRLAKDQVSSLNAAVNHLS---LALSNAIMFNK--- 314 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGD 182 + R+N D LT + RR DE + + + LN L L+++D+D FK VNDTYGH+ GD Sbjct: 315 IKTRANRDGLTRVYNRRSFDERLVEEFKRHQRLNTELSLLMVDLDYFKAVNDTYGHMAGD 374 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 +VL +A R + + RYGGEEF+I++ +++A RI +++ A+T+ + Sbjct: 375 MVLEKVARMFEKTFRSTDFIARYGGEEFVILLPHTREDQAEMLAERIRAKIESCAMTYQD 434 Query: 243 GHINITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVI 293 NIT + GVS P E ++ +AD A+Y+ K GRNR + + + Sbjct: 435 KSFNITASIGVSSVRPGSLEKDTEIVRKADEALYDAKMQGRNRVVVSPMRPKL 487 >UniRef50_D2TII3 Diguanylate cyclase YddV n=13 Tax=Enterobacteriaceae RepID=D2TII3_CITRO Length = 460 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 70/292 (23%), Positives = 122/292 (41%), Gaps = 6/292 (2%) Query: 4 KTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGP 63 + I ++L N + + L+S ++ + + ++ FG W +H G Sbjct: 167 ENYRIFSLLENAEEEKERQIASLLSWEMDIIYKIMLDADFGNSLPLSQADFGLWFNHKGR 226 Query: 64 LDNDELPYVRLMDSAHQHMHNCG---RELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 + V + Q RE A+ + + + L + Sbjct: 227 HYFSGIAEVGHISRLIQDFDGLFLQSRETAKALSNKAARVKFLLQIRNTVSQIITLLREL 286 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGH 178 + MDVLT L RR L F ++ +A L ++++D+D+FK +NDT+GH Sbjct: 287 FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRAGTPLSILIIDVDKFKEINDTWGH 346 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 GD +LR ++ R + V+RYGG+EFII++ A + R RI V+ I Sbjct: 347 NTGDEILRRVSQAFYDNVRSSDYVFRYGGDEFIIVLTEATQADTLRIAERIRLRVEKTKI 406 Query: 239 THSEG-HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 +G I ++++ G + + +I AD A+Y K+ GRNR Sbjct: 407 KSPDGATIPLSLSIGAAMFNGHPDYERLIQIADEALYTAKRQGRNRVELWSP 458 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 93/213 (43%), Gaps = 8/213 (3%) Query: 87 RELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDES 146 R Q + + T L + L S D LT + RR DE Sbjct: 349 RRQQAQEHALDIQRQANLTLESRVRERTEEL-EQANEQLRAISLTDGLTHVANRRRFDEK 407 Query: 147 FDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVY 203 + + A L L+LLDID FK VND +GHL+GD L LA+ L+ R + V Sbjct: 408 LETEWNRALRHEHELSLILLDIDHFKQVNDRFGHLVGDDCLVALASILSDEVQRSGDLVA 467 Query: 204 RYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG--HINITVTAGVSRAFPE-- 259 RYGGEEF I++ + A + R+ V + E +++T++ GV+ P Sbjct: 468 RYGGEEFAILLPTTDVAGAQQVAERMRLSVARTPVNSGEHMSPVSLTISLGVATLTPNRQ 527 Query: 260 EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNV 292 +I RAD A+Y K GRNR + + V Sbjct: 528 SDCQELIRRADEALYAAKSDGRNRVVVWHPKAV 560 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 2/169 (1%) Query: 122 IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHL 179 + L + +D LTG+ RR LD +L + L +M+LDID FK +NDT+GH+ Sbjct: 132 EHKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIMMLDIDHFKEINDTHGHI 191 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 GD LR ++ L R + + RYGGEEF I+ + E+A R V + Sbjct: 192 CGDYTLRKISELLLELVRTSDILGRYGGEEFCCILPETSFEQALVLAERCRTQVAASQFS 251 Query: 240 HSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 ++ +TV+ GV+ ++ LD +I RAD A+Y+ K+TGRNR Sbjct: 252 CTDHQSRVTVSIGVTDLHRDDTLDSIIKRADDALYQAKRTGRNRVCSSP 300 >UniRef50_B4SPL2 Diguanylate cyclase n=3 Tax=Stenotrophomonas RepID=B4SPL2_STRM5 Length = 471 Score = 266 bits (680), Expect = 7e-70, Method: Composition-based stats. Identities = 68/286 (23%), Positives = 128/286 (44%), Gaps = 5/286 (1%) Query: 6 TEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLD 65 + +++ N+ + L+ ++++ A + +DN S +FG W H G Sbjct: 174 YRLFSLVQNVGTERERQRALLLDWENALLYALAGHVQASDNASLATSEFGLWFTHKGIPS 233 Query: 66 NDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLL 125 E + + + + + + A A +E L + +T + Sbjct: 234 FGESSETQQVGQLMARIDGHLQ--RASGDAPAQRLAVLPAIREDLAAIRTLMTLLFERIG 291 Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 + + D LT L RR L ++ A L+LLD+D FK +ND +GH GD Sbjct: 292 ELDAGSDALTNLLNRRFLPTVLRREIELATRNRTPFSLLLLDLDHFKAINDGHGHDAGDR 351 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH-SE 242 L+ +A L TR + ++RYGGEEF++++ AA++ +A + + + + + Sbjct: 352 ALQHVAGVLGQLTRGSDYLFRYGGEEFVVVLVAASESQAAVIAESLRRQIAKSPVPLANG 411 Query: 243 GHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 +++T + GV+ + ++ RAD AMYE K++GRNR + Sbjct: 412 QVLSLTASIGVAGHDGHPDYERLMARADAAMYEAKRSGRNRVVVAS 457 >UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX81_9GAMM Length = 384 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 8/225 (3%) Query: 65 DNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL 124 + +PY ++++ +H+ L+L + + A + + Sbjct: 162 ALEVIPYASVIETNGTPLHHNATWLILLLGLSTPYIGLLVAMNSSAIRRWRQ----RESE 217 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN---LYLMLLDIDRFKLVNDTYGHLIG 181 + S D LT + RR L E + ++ E L L+++D+D FK +ND +GHL G Sbjct: 218 VRQLSTTDPLTQVANRRHLLERLNLEISRCERSGHSELSLLMMDLDHFKSINDEHGHLFG 277 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D LR A L +R+ + V RYGGEEF +++ + A + R Q ++ I Sbjct: 278 DEALRVTARVLREQSRNTDLVGRYGGEEFCLLLPDTGPQGALQIAERCRQALEQADIDRE 337 Query: 242 EGH-INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 +G ++IT + G++ + + ++ RAD A+Y+ K+ GRNR + Sbjct: 338 DGEVLHITTSIGLATYQMGDTNESLLHRADEALYQAKEQGRNRIV 382 >UniRef50_A1U2H0 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U2H0_MARAV Length = 630 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 68/272 (25%), Positives = 114/272 (41%), Gaps = 11/272 (4%) Query: 24 QWLVSMFHSVVARDA-----SKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSA 78 W+ +F +V + + +T+N + G + + D + + Sbjct: 346 AWVFMLFGGIVLALSKFTMLPRNLLTENATQVGSALGVILLSIALADRLNREKKKSFAAQ 405 Query: 79 HQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLP 138 + + + + Q +E + T L + L S D LTGL Sbjct: 406 QKLLREERKARLAQEKSLRIQQEANALLEERVQERTRDL-EILNEQLLELSATDPLTGLK 464 Query: 139 GRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT 196 R D+ F + +A L L+++DID FK NDTYGHL+GD L+ +A + Sbjct: 465 NRGHFDKKFQSDVVHAYRFEETLSLLIVDIDHFKGFNDTYGHLVGDDCLKMVADCIKQHV 524 Query: 197 -RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSR 255 R + RYGGEEF++++ + ACR I + + A S+ +++TV+ GV Sbjct: 525 TRPQDLAARYGGEEFVVLLPDTPEAGACRVAELIREDIQKMAFRVSDQVLHLTVSIGVCS 584 Query: 256 AFPE--EPLDVVIGRADRAMYEGKQTGRNRCM 285 P + + AD A+Y K GRNR + Sbjct: 585 CAPSQADATKALFACADGALYRAKAEGRNRVV 616 >UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9C4_9DELT Length = 498 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 5/219 (2%) Query: 83 HNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKI-YLLTIRSNMDVLTGLPGRR 141 G ++L + + F+ + AL + I + +R++ D LT + R Sbjct: 278 ETFGCLVLLCEPDYRLGRDQVETFRSAVNHLGLALRNALIFKEVKLRADRDGLTRIYNRH 337 Query: 142 VLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDY 199 DE ++++ N L L+++D+D FK VNDTYGH GD+VLR + L R Sbjct: 338 SFDERLIYEIKRRRRYNHDLSLLMVDLDHFKQVNDTYGHKAGDMVLRKVGEILTETFRTT 397 Query: 200 ETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE 259 + RYGGEEF++++ ++E A + RI + + ++T + GV+ Sbjct: 398 DLAARYGGEEFVVLLPHTSEEAAWKLAERIRESIQGCVFRFDGHEFSVTASIGVASVEAG 457 Query: 260 --EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV 296 D ++ +AD+A+Y+ K GRN + + V Sbjct: 458 ALTRDDDLLIKADKALYKAKNNGRNMVVISRPEGAAQAV 496 >UniRef50_Q4KKJ4 Diguanylate cyclase, putative n=5 Tax=Pseudomonas fluorescens RepID=Q4KKJ4_PSEF5 Length = 727 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 76/289 (26%), Positives = 122/289 (42%), Gaps = 18/289 (6%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 + + ++A NL A D H + A D+ E D + + D Sbjct: 451 LKQLNERLEAFQSNLQAASDGHADSS----SAARAMDSQIREQVDGLQSSVQEAADLDDL 506 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 L++ + MD + RE+ A + E + S Y Sbjct: 507 KQVLESHLEGLLGTMDHHQKQRDEREREVA----------ARLQSLAERVSSMEQEAQGY 556 Query: 121 KIYLLTIR--SNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTY 176 + +L R + +D LTGLP R E +H++ + +L L +LD+D FK +ND Y Sbjct: 557 REHLEEQRQKALIDPLTGLPNRAAWSERLEHEVGQWQQHGNSLLLAMLDLDHFKRINDNY 616 Query: 177 GHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNH 236 GHL GD VL+ +A L R + + R+GGEEF++++ R + ++ Sbjct: 617 GHLAGDKVLKIIANVLRKRLRGSDFIARFGGEEFVLLLPNTPWPVGVRIVEALRAAIEAC 676 Query: 237 AITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + ITV+ G+S + D+VI RAD+A+Y K GRNR Sbjct: 677 PFHFKGEPVTITVSVGLSAFKAGDRSDLVIKRADQALYRAKDAGRNRVE 725 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 117/290 (40%), Gaps = 10/290 (3%) Query: 3 KKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQF-----GRW 57 + E+ + + + + E + +C+ G Sbjct: 327 RFFFEVFDTSTEIVYVSNQRRILFANKRFFEFFNEFETLEDFHEKYHCICELFMPEEGFL 386 Query: 58 IDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAAL 117 H+ + + + + G+E + + +A+ D + L++ Sbjct: 387 RRHINGVYWFNHVIQNKHEPHYAKVQLNGKEYIFLVKATEISNAYGDQYVSVLMTDITEE 446 Query: 118 TDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDT 175 YK L D LTG+ R + + + +++ + + +DID FK++NDT Sbjct: 447 EHYKSQ-LEHLIIHDELTGVYNRHYFNRTLEQEIKRHQRYQSPFSMAFMDIDHFKMINDT 505 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 YGH +GD VL +LA ++S R + R GGEEF+I++ + E A RI V+ Sbjct: 506 YGHDVGDAVLVSLAKNISSLLRSTDVFCRVGGEEFVIMMPETSLENALIISERIRSTVEG 565 Query: 236 HAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 I+ + IT++ G+ + + RAD A+Y+ K+ GRNR Sbjct: 566 --ISSKDVPEKITISMGLVELNSWDNVQSFYKRADEALYKAKENGRNRIE 613 >UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepID=A1WM32_VEREI Length = 612 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 9/239 (3%) Query: 52 CQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCG-RELMLAIVENHWQDAHFDAFQEGL 110 +FG D + + + RE+ I + + + Sbjct: 373 SEFGLLAD----MVLLSQALADRVKLLSEQRDAAELREIEQKIATTALLKQANEDLERMV 428 Query: 111 LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDR 168 L T+ L + + +D+LTG+ RR +E + + L ++L+DID Sbjct: 429 LERTSELARARDEA-EHFARIDMLTGVANRRYFEEVATMEFARTQRGQQALSVILIDIDL 487 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK VND YGH GD V+R +A R+ + V R GGEEF +++ A R Sbjct: 488 FKQVNDRYGHAAGDAVIRAVARLAKESVRESDFVARIGGEEFSVLLPGIGQAPAFATAER 547 Query: 229 ICQLVDNHAITHSEGHINITVTAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRNRCMF 286 + + + + H + T + GVS ++P ++ RAD+A+Y KQ GRN+ + Sbjct: 548 LRERIAACVVEHDGHSLGFTASFGVSEQVADDPGFSSLLRRADQALYAAKQAGRNQVVV 606 >UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IJX5_PSEHT Length = 621 Score = 262 bits (671), Expect = 8e-69, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 6/212 (2%) Query: 90 MLAIVENHWQDAHFDAFQEGL-LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFD 148 L++ E+ Q+ + L T + K L + D LTG+ RR D+ Sbjct: 408 RLSLQESVRQELETQVDERTFELQVTLRELEEKNRELEQLNMEDPLTGIKNRRFFDKKLV 467 Query: 149 HQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRY 205 +LR + L +++LDID+FK++NDTYGHL GD V+RT A + R + V RY Sbjct: 468 MELRRSRREQTPLSVIMLDIDKFKVINDTYGHLTGDQVIRTAADTIKKQLQRPLDEVARY 527 Query: 206 GGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE--PLD 263 GGEEF++++ ++ A +I + + + + I+ T++AGV + E+ + Sbjct: 528 GGEEFVVLLPNTQNDGAIAIAEKIRHAIATNNVHVAGTTISFTISAGVYTSVAEDINNPE 587 Query: 264 VVIGRADRAMYEGKQTGRNRCMFIDEQNVINR 295 + RAD+A+Y KQ GRN+ + +R Sbjct: 588 IFTERADKALYFAKQHGRNQVINFPIPQSQSR 619 >UniRef50_A6VSB0 Diguanylate cyclase n=2 Tax=Gammaproteobacteria RepID=A6VSB0_MARMS Length = 296 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 5/287 (1%) Query: 4 KTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGP 63 ++ I+ L++AI H QW + ++ R + ++ C FG+W + Sbjct: 5 TNQQLQLIIAQLDQAIFNHDQWYKHILRILILRIPPEKADIAPEAHRHCHFGQWYESSQA 64 Query: 64 LDNDELPYVRLMDSAHQHMHNCGRELMLAIVENH-WQDAHFDAFQEGLLSFTAALTDYKI 122 E P + AH+ MH + L+ I + +D+F + + A + Sbjct: 65 FFIRENPAFISLGDAHKKMHISAQNLLQKISDGLLILSIDWDSFDKDIDKMRLAFQSLRH 124 Query: 123 YLLTIRSNMDVLTGLPGRRVLDESF--DHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI 180 I N D LT R + + L N L++ D+D FK VNDTYGH+ Sbjct: 125 EFTVIAKNRDPLTEAQTRDGMLAEISDQNALVQRGQQNCALVMFDLDHFKQVNDTYGHIA 184 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD+VL + + + R Y+ +YRYGGEEFII + +A R+ + + I Sbjct: 185 GDLVLVSTVQRIKTLLRPYDRIYRYGGEEFIICMPRTTLAQAHMVAERMREAIAEQNIQF 244 Query: 241 SEG--HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + +T + GV+ ++ I D+AMYE K+ GRNR + Sbjct: 245 DNSRESLRVTASFGVTILTQLRSVEESIDYVDKAMYEAKRAGRNRVV 291 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 2/213 (0%) Query: 78 AHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGL 137 + + +L + + L + +D LTGL Sbjct: 240 MKEVVAKMRMNRLLTAASAVLVLGLLLGLLAVINNRFLKELREAQEKLVEMATIDSLTGL 299 Query: 138 PGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASW 195 RR E + +L + +LLDIDRFK +NDTYGH GD VL L Sbjct: 300 LNRRAGLERVEEELSRHQRSERAFACLLLDIDRFKKINDTYGHQAGDAVLSEFGATLRRH 359 Query: 196 TRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSR 255 R ++ V RYGGEEF++++ + A +I + I + I +T + G+S Sbjct: 360 VRKHDIVCRYGGEEFLLLLPDTSPSAARTTAEKIRAVTAATPIMFAGRQIAVTTSIGISM 419 Query: 256 AFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 +E +I RAD A+YE K +GRNR + + Sbjct: 420 MQGDETAKAMIARADAALYEAKNSGRNRVVCAE 452 >UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21PN7_SACD2 Length = 565 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 126/281 (44%), Gaps = 7/281 (2%) Query: 12 LLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPY 71 LLN+N+ + + + L + R + +T + S + Q + L + + Sbjct: 288 LLNINRELVSISEALGVAEDAEQQRGGAAEALTASVSKSVKQLQADVAKSNSLPDLQSTV 347 Query: 72 VRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGL--LSFTAALTDYKIYLLTIRS 129 + + + + + A A + + + + + ++ ++ Sbjct: 348 SDHIRTIQNALSTFKQ---AQPAPSQSLSAQLKALMDRVKTVEEESEKSRAQLEEQRYKA 404 Query: 130 NMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LT LP R +E H+L + L L + D+D FK +NDT+GH GD VL+ Sbjct: 405 THDPLTSLPNREAYNERAFHELHRFKRYGHPLTLAVCDLDHFKKINDTFGHQAGDKVLKL 464 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 +A +++ R+ + V RYGGEEF++++ + E+A ++ + + + I Sbjct: 465 VAQVVSTRLRNVDFVARYGGEEFVLVMPETDAEQAKTVLDKMRAAIAKTPFRFKDSPVTI 524 Query: 248 TVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 T++ G+ + E+ ++ RAD+A+YE K GRN+C+ Sbjct: 525 TMSFGIVQFRGEDSVESAFARADKALYEAKANGRNQCVIAP 565 >UniRef50_C8Q5F4 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8Q5F4_9ENTR Length = 299 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 100/294 (34%), Positives = 150/294 (51%), Gaps = 2/294 (0%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 M + +I+ + +LN AI HY+W + + + D HS+G C FG+WID Sbjct: 1 MQRTIYDIEVDIASLNHAIKNHYEWSNRLLEISLFGGNFDKSLADPHSHGYCDFGKWIDA 60 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 + N + + +H MH+ RE++ AI N + + + + SF AL Y Sbjct: 61 MLIKYNFNDNDLLRISDSHIKMHDAVREIITAINANSFTHPQLEEYFQKQKSFLDALDGY 120 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGH 178 K LL RS+ D LT LP R L F+ + LY+++LD+D FK VND YGH Sbjct: 121 KTRLLASRSSYDALTELPMRSKLISDFERLQQRCALTEHTLYVIILDVDHFKTVNDQYGH 180 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 GD VL+ LA L R E YRYGGEEF+I+V+A + + R+ + + N Sbjct: 181 NGGDTVLKGLAQLLLETMRKCEKCYRYGGEEFVILVEAPCLADIKKLVERLMKRMRNETF 240 Query: 239 THSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNV 292 ++ IN+T T GV+ + L+ I AD+AMY GKQ GR+ C++ + + Sbjct: 241 SYEHHIINVTATFGVAPVRDDGSLERSIELADKAMYHGKQHGRDICIYNHNEEM 294 >UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Idiomarina baltica OS145 RepID=A3WMD3_9GAMM Length = 689 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 6/238 (2%) Query: 53 QFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLS 112 + G ++ G E+ + + +D A + Sbjct: 454 EKGEVREYKGRQVLSPRHSFEQWQQDVDGYAPIWTEIQIEAAKTLAEDLAIGASAYQIEQ 513 Query: 113 FTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFK 170 LT+ L + D LT + R ++++ + +++ + L ++LLDID FK Sbjct: 514 LNQELTEA-NQRLEHLVHTDALTQVWNRYHMEQTLEEEVKRCKRHGRDLAVILLDIDHFK 572 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 VND YGH +GD VL+ ++ + W R + R+GGEEF+II + E A + R+ Sbjct: 573 RVNDDYGHDVGDKVLKLISEAIHQWLRSSDVFGRWGGEEFLIIAPETDLESANQLAERLR 632 Query: 231 QLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + + N + +T + GV+ P E + ++ RAD A+Y+ K++GRN Sbjct: 633 RRLSNLQF---DKVGQVTASFGVAELLPSEDRNSLVKRADNALYQVKESGRNSVEVSP 687 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 57/158 (36%), Positives = 92/158 (58%), Gaps = 2/158 (1%) Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 + D LTG+ RR E +++ + L ++++DID FK VNDTYGH +GD VL Sbjct: 312 ATTDPLTGIANRRYALEQAALEIKRNQRTGTPLSVVMMDIDHFKKVNDTYGHHVGDQVLM 371 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 +A S R+ + V R+GGEEF+I++ + N A +I Q +++ + +EG+++ Sbjct: 372 EVAQTCRSHCRESDLVSRFGGEEFLILLPSTNLNGAQTHAEKIRQAIEDLSFPTAEGNVS 431 Query: 247 ITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 +T + GVS+ E +D V+ RAD A+Y+ K GRN Sbjct: 432 VTASFGVSQWQGETKIDRVVSRADAALYQAKHDGRNCV 469 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 4/188 (2%) Query: 104 DAFQEGLLSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NL 159 D L +T+ Y L + +D LTG+ RR L+ + Sbjct: 114 DNAITSLFLIVQDVTELATYEQKLIEMNTVDALTGVYNRRFLESRLKEECDRYGRYSRPF 173 Query: 160 YLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAND 219 LM++DID FK VNDT+GH GD+VL+ +A A+ R + + RYGGEEF ++ + Sbjct: 174 SLMMIDIDFFKKVNDTHGHQGGDLVLKNVAAGAAAMIRKSDFLARYGGEEFCCLLPETDC 233 Query: 220 EEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQT 279 + A + ++N + I +T++ G++ P++ + ++ RAD A+Y+ K++ Sbjct: 234 DAAETVAEHLRAHIENMEHLFQKKVIRVTISLGIACFAPDDSPETLVKRADEALYQAKRS 293 Query: 280 GRNRCMFI 287 GRNR + Sbjct: 294 GRNRFVRF 301 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 72/301 (23%), Positives = 129/301 (42%), Gaps = 26/301 (8%) Query: 7 EIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLC-QFGRWIDHLGPLD 65 I+ L + +YQ + +S+V + D + + + D Sbjct: 476 RIENALKTIELRKKLNYQ--NDLVNSIVKNTQVGVLVFDEDNIYYENDYLLELLGYTHED 533 Query: 66 NDELPYVRLMDSAHQH--MHNCGRELMLAIVENHWQDAHFDAF-QEGLLSFTAALTDY-- 120 L ++ H + + + + E H + +G L+F + + Sbjct: 534 IKTLSIFDILSPIHVKDIIKALTNKTPIILQEFHILNKKNQTLYVKGSLNFIKDVENKPV 593 Query: 121 ---------KIYLLT----IRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLD 165 K L+ +S D LTG+ RR L+ + ++ A+ L L++ D Sbjct: 594 AVFTFVDITKEKELSDMLLKQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMFD 653 Query: 166 IDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRA 225 ID FK +ND++GH +GD VL+ +A ++ R+ + RYGGEEF+II E+A Sbjct: 654 IDFFKHINDSFGHDVGDKVLKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKIL 713 Query: 226 GVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 ++ L+ N IN+T + GV+ + + ++ RAD A+YE K+TGRN+ + Sbjct: 714 AEKLRSLIRNLHFEEG---INVTCSFGVASLEKHDTKETLLKRADEALYEAKKTGRNKVV 770 Query: 286 F 286 Sbjct: 771 V 771 >UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X007_DESRD Length = 531 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 3/208 (1%) Query: 90 MLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDH 149 L I + +DA + + +L + L + D LTGL RR E Sbjct: 318 WLEIERSEIRDARGRLWGQLVLMRDVSERKEAESRLLQMAATDELTGLYNRRRFFELARG 377 Query: 150 QLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGG 207 + A+ + ++LLDID FK +ND YGH GD LR + + +AS R + + R GG Sbjct: 378 EFNRAKRYSSPMTILLLDIDYFKRINDEYGHDAGDTALRCIVSMIASQLRSLDVLARLGG 437 Query: 208 EEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVI 266 EEF+ ++ + +A R RI +++ AI E + +TV+ GV+ E + + +I Sbjct: 438 EEFVALLPETHQFDAERIAERIRSEIESTAINLFETTLFVTVSIGVAGYSKEMQDVGELI 497 Query: 267 GRADRAMYEGKQTGRNRCMFIDEQNVIN 294 RAD AMY K+ GRN+ +N++ Sbjct: 498 NRADEAMYRAKRDGRNQVCLATPRNLVQ 525 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 6/199 (3%) Query: 92 AIVENHWQDAHFDAFQE-GLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQ 150 A+ +N +D AF++ + + LL +++ D LTG+ R +++ + Sbjct: 234 AVFKNETRDGAVIAFRDITVQKKNLQSLEGINELLEKQASTDALTGIFNRMKFNQTLTSE 293 Query: 151 LRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGE 208 ++ A+ L L+L DID FK VND+YGHL GD VL+ LA +AS R+ + R+GGE Sbjct: 294 IKRAKRYRVALSLILFDIDHFKQVNDSYGHLSGDTVLKHLARLVASNLREIDIFARWGGE 353 Query: 209 EFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGR 268 EF+I + E A + ++ ++N+ + ITV+ GV+ + ++ R Sbjct: 354 EFVIQAPETSLESAIKLAEKLRSKIENYVFPAPK---KITVSFGVATFRSSDNDITLVNR 410 Query: 269 ADRAMYEGKQTGRNRCMFI 287 AD A+Y K+ GRN+ + Sbjct: 411 ADEALYRAKEGGRNQVVSH 429 >UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W79_COLP3 Length = 334 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 24/270 (8%) Query: 25 WLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHN 84 WL SV+ + F W ELP+ R + + + M Sbjct: 81 WLSRKLSSVLQLNTPS-------------FCSW---QQRHHLFELPHTRPITTDSEFMAQ 124 Query: 85 CGRELMLAIVENHWQDAHFDAFQEGLLSF--TAALTDYKIYLLTIRSNMDVLTGLPGRRV 142 L +E H E + + + S +D LT + RR Sbjct: 125 NCTFL---PIETDVNGKHICILIEDVTDACHYQMQLQKTLAEIAQISRIDGLTQVYNRRH 181 Query: 143 LDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYE 200 +S + + A L L++LD+D FKL+ND YGH GD+VL ++ +++ R + Sbjct: 182 WQDSLEQEYAKARRHDKKLSLIMLDLDHFKLLNDNYGHQGGDMVLIEVSALISTLLRVED 241 Query: 201 TVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE 260 T RYGGEEF II+ + A RIC+++ T+++ I +TV+ GV++ +E Sbjct: 242 TFGRYGGEEFAIILPETDSAGAIELAQRICRIIATTPFTYNDQVIKVTVSLGVAQLSSKE 301 Query: 261 P-LDVVIGRADRAMYEGKQTGRNRCMFIDE 289 + +I +AD A+Y+ K GRN+ E Sbjct: 302 SNYEELITQADSALYQAKSQGRNQVCNAAE 331 >UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCX8_9BURK Length = 600 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 66/230 (28%), Positives = 101/230 (43%), Gaps = 7/230 (3%) Query: 66 NDELPYVRLMDSAHQHMHNCGRELMLAIVE-NHWQDAHFDAFQEGLLSFTAALTDYKIYL 124 + + H REL+ + A + + T L Sbjct: 369 LLAFALADRFNQMRREKHMAQRELVSTQQQLVETLRASEQELAQRVEERTRQL-QVANER 427 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGD 182 L S +D LTG+ RR D+ + E L L++LD+D FK ND +GH GD Sbjct: 428 LEALSMVDGLTGIANRRHFDQVLHKEWTRLERAGQPLALVMLDVDWFKRYNDHFGHQAGD 487 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS- 241 LR +A ++ +R + V RYGGEEF+II + +A + R C V + H Sbjct: 488 ECLRAVAQAISGVSRASDLVARYGGEEFVIIAPGTDGPQALQMAQRACDAVRALGMPHPL 547 Query: 242 EGHINITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 +TV+ GV+ P + L+ ++G+AD A+YE K GRNR + + Sbjct: 548 AYEAVVTVSCGVAVTVPGPDDSLENLLGQADDALYEAKAQGRNRVVLAEP 597 >UniRef50_Q320T0 Diguanylate cyclase yddV n=41 Tax=Enterobacteriaceae RepID=YDDV_SHIBS Length = 460 Score = 260 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 122/290 (42%), Gaps = 6/290 (2%) Query: 4 KTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGP 63 + I ++L N + + ++S ++ + ++ + FG W +H G Sbjct: 167 ENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGR 226 Query: 64 LDNDELPYVRLMDSAHQHMHNCGRELMLA---IVENHWQDAHFDAFQEGLLSFTAALTDY 120 + V + Q + M + + + + L + Sbjct: 227 HYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLREL 286 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGH 178 + MDVLT L RR L F ++ +A L ++++D+D+FK +NDT+GH Sbjct: 287 FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGH 346 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 GD +LR ++ R + V+RYGG+EFII++ A++ E R RI V+ + Sbjct: 347 NTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL 406 Query: 239 T-HSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 + I ++++ G + + +I AD A+Y K+ GRNR Sbjct: 407 KAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 >UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFS2_CARHZ Length = 543 Score = 260 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 118/291 (40%), Gaps = 10/291 (3%) Query: 5 TTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPL 64 E+ I + + L + D + + H+ L + G + Sbjct: 256 LQELKNTFSYHTGVIYTYSESLRKYIPRYLNTDFPELPGPEFHNTLLSEMG----NRKTA 311 Query: 65 DNDELPYVRLMD--SAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKI 122 + P + + G +++A ++ + + A+ + + Sbjct: 312 ALIKHPQLGSIAVVPLQNRRDVFGYLVIVAPKGQNYSHSQLRRLENISGQVALAVYNGYL 371 Query: 123 Y-LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNL--YLMLLDIDRFKLVNDTYGHL 179 Y L + D LTGL RR E + + + L ++LLDID FK +NDTYGH Sbjct: 372 YLRLKELAQKDELTGLYNRRYFLERLNEEHLRSRRHKLNYTIVLLDIDYFKKINDTYGHD 431 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 GD+VL +L R + RYGGEEF++++ +EA R+ + V + Sbjct: 432 CGDLVLNDFGRFLKDTLRRTDLSARYGGEEFVVLLPQTGKKEAYLLAERLREKVKERVLI 491 Query: 240 HSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 + TV+ G++ + E ++ AD+A+Y+ K GR++ + ++ Sbjct: 492 FQGQKVKYTVSMGLAAYPEDAEEYRELLSLADKALYQAKNRGRDKVVMVNN 542 >UniRef50_B7LMM6 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B7LMM6_ESCF3 Length = 472 Score = 260 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 119/293 (40%), Gaps = 5/293 (1%) Query: 3 KKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLG 62 ++ + I ++N + + L + + A+ I D +FG W H G Sbjct: 176 EEQYRLLTIYDDINVERERQIRSLTDWENQFIYNIATGLPIKDLVFLSKSEFGMWFAHKG 235 Query: 63 PLDNDELPYVRLMDSAHQHM-HNCGREL-MLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 + + M++ + + H+ +EL + A + + ++ L+ Sbjct: 236 KHILGKSVLLSGMETLMKKIDHHLKQELPLHAQLTTDERLKLLQEIRQLTAQIHILLSSM 295 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGH 178 L+ + D LT L RR + ++ A L +LDID FK +ND YGH Sbjct: 296 FEDLVKEENGKDSLTQLLNRRFIPTIMRREISIALHSRKPFALAMLDIDYFKQINDRYGH 355 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 GD L+ ++ + R + V+RYGGEEF+I++ +A + + I Sbjct: 356 NAGDNTLKNVSAMIYEHIRSSDYVFRYGGEEFMILLVETELSQAKIILENLRNKMAGLRI 415 Query: 239 THS-EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 S ++TV+ GV+ ++I +AD A+Y K GRNR Sbjct: 416 QASASESFSVTVSIGVAEYDYHPDYKLLIEKADSALYYAKSQGRNRVEVFQPH 468 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 259 bits (663), Expect = 7e-68, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 3/199 (1%) Query: 91 LAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQ 150 L + A + + K L + D LT L RR DE ++ Sbjct: 802 LGLAATILVRARIRFLNNQRAQLELMVAE-KTKELKGLARQDSLTQLGNRRAFDEQLQYE 860 Query: 151 LRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGE 208 + E L L ++D+D FK +ND + H+IGD VL L+ L++ RD + + R+GGE Sbjct: 861 FKRCERSEQPLSLAIIDVDHFKSINDRFLHVIGDQVLIELSALLSNMLRDIDYIARWGGE 920 Query: 209 EFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGR 268 EF +++ +EA +A RI Q +++ + H + +TV+ GV+ + ++ Sbjct: 921 EFALLMPETTAKEALQAAERIRQRIEDTSYQHLADELAVTVSIGVASSEHYPNHSALLVA 980 Query: 269 ADRAMYEGKQTGRNRCMFI 287 AD+A+Y+ KQ+GRNR Sbjct: 981 ADKALYKAKQSGRNRTELA 999 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 259 bits (663), Expect = 7e-68, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 5/180 (2%) Query: 111 LSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDI 166 ++ +T+ K L + D LTGL RR E + + + L ++++DI Sbjct: 870 VATIRDITERKATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLMMDI 929 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAG 226 D FK VNDT+GH +GD VLR LA + R+ + + R GGEEF +++ + A Sbjct: 930 DHFKRVNDTHGHGVGDEVLRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAMEVA 989 Query: 227 VRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCM 285 R+ + ++ ++ G + ITV+ G + + + E ++ ++ RAD A+YE KQ+GRN+ + Sbjct: 990 QRLRRAIEKASMATDAGTLRITVSIGAATSNNDAETVETLLKRADVALYEAKQSGRNKVV 1049 >UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRD6_THISH Length = 464 Score = 259 bits (663), Expect = 8e-68, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 5/201 (2%) Query: 92 AIVENHWQDAHFDAFQEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDH 149 + + Q +E AL + L ++ D LTG+ RR L E D Sbjct: 264 SFSTVYSQMDMMAQLREQQAWTQEALLQVQEANRKLEQLASTDALTGVANRRQLVERADM 323 Query: 150 QLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGG 207 ++ +E L L+ LD+D FK +ND YGHL GD VL+ +A + R + + R GG Sbjct: 324 EVPRSERHGAPLSLLCLDLDHFKRINDDYGHLAGDEVLKQVAEAIQQSLRPSDLLARVGG 383 Query: 208 EEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFP-EEPLDVVI 266 EEF +++ + A RI ++ I +++TV+ G ++ P + + Sbjct: 384 EEFHVLLPDTDLAGARDVAERIRVKLEGLDIPVQGVVLHVTVSVGCAQLGPDGADMKSLT 443 Query: 267 GRADRAMYEGKQTGRNRCMFI 287 AD +Y+ K GRNR + Sbjct: 444 HTADERLYQAKALGRNRVVIA 464 >UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRA7_DESBD Length = 495 Score = 259 bits (662), Expect = 9e-68, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 91/186 (48%), Gaps = 3/186 (1%) Query: 109 GLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDI 166 LL + + L + ++ D+LTG RR ES + L +++D+ Sbjct: 308 TLLVRGQIRLNRQSRELALAASTDMLTGALNRRAFMESASREFARVCRYGGHLSCIMIDL 367 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAG 226 D FK VNDTYGH GD+VL + A Y+AS R+ + RYGGEEF+I++ + A Sbjct: 368 DHFKNVNDTYGHAAGDLVLSSSAHYIASRLREPDMFCRYGGEEFVILLPGTDRNGAATVA 427 Query: 227 VRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCM 285 + + + + + +T + GV+ + LD ++ AD+A+YE K+ GRNR Sbjct: 428 EELRAGLAGLDLQRGDEKLPLTASFGVAEIHAQCATLDTLLSLADQALYEAKENGRNRVC 487 Query: 286 FIDEQN 291 Q Sbjct: 488 LAPRQQ 493 >UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q4KDW8_PSEF5 Length = 315 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 5/237 (2%) Query: 54 FGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSF 113 F W + + + M+ L L + + ++ Sbjct: 83 FTIW---KQRPYLVHFNNYQPITGQGEFMYQNTTLLPLRSSNSEIHHVCLVIYDLTDVAI 139 Query: 114 TAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVN 173 + L S D LT L R ++ + ++ L++LDID FK +N Sbjct: 140 NSLALQKANQQLQHLSRTDHLTQLYNRGHWEQRLQFEYSR-HGSSIALLMLDIDHFKSIN 198 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 D +GH GD V++ ++ + RD + RYGGEEF I++ + A R+ Q V Sbjct: 199 DRHGHQAGDAVIKRVSELIHQHVRDSDVAGRYGGEEFAILLPHTDLAGARTLAERLRQSV 258 Query: 234 DNHAITHSEGHINITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 + + H+ I T++ G++ P +I AD+A+Y K+ GRNR Sbjct: 259 EEQEVIHNGQAIAFTISLGIACLDRPARDHRCLIEWADQALYASKRAGRNRVSTYAP 315 >UniRef50_Q2SPL3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL3_HAHCH Length = 373 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 5/206 (2%) Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTI---RSNMDVLTGLPGRRVLDE 145 L+ A+ Q A F L + L ++ D LTGL RR L + Sbjct: 161 LLTALFMVMAQMALIGGFISKLRASLRVKNHQLNEALEKISVMASTDELTGLCTRRELMK 220 Query: 146 SFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVY 203 ++ + L L LLDID FK +ND+YGH GD VL+ +A + S R + + Sbjct: 221 QLSNEFSRCRRSSGALSLCLLDIDHFKRINDSYGHQAGDAVLKKVAQTMQSLVRSIDCLG 280 Query: 204 RYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLD 263 RYGGEEF++I+ + A R+ + V + +T++ G + E ++ Sbjct: 281 RYGGEEFLLILPQTPLDGAFITAERLRRAVMDIPFPEVAPEFRVTISLGAAELEEGEAME 340 Query: 264 VVIGRADRAMYEGKQTGRNRCMFIDE 289 +I R D+A+Y K GRNR + ++ Sbjct: 341 TLISRVDKALYAAKGAGRNRVVSAEQ 366 >UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QT79_PERMH Length = 509 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 5/191 (2%) Query: 106 FQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLML 163 GLL + + + +D LTG+ + + +L ++ L L++ Sbjct: 319 LLVGLLLTMSFILGVIKERFKAMAEIDTLTGIYNKGKFNHLLQVELDRSKRYGRPLSLII 378 Query: 164 LDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEAC 223 DID FK +ND +GH GD VL+TLA ++S R + R+GGEEF+I+ + E A Sbjct: 379 FDIDHFKKINDAFGHQAGDYVLKTLAKIVSSNIRSTDFFARWGGEEFVILAPETDLEGAQ 438 Query: 224 RAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 +I + ++ + +T + GV+ AF + +D + RAD A+Y+ K GRNR Sbjct: 439 ILAEKIRKAIEEYPFETVG---KVTSSFGVTEAFENDTVDSFVKRADVALYKAKDKGRNR 495 Query: 284 CMFIDEQNVIN 294 N+ + Sbjct: 496 VEIELPANIYS 506 >UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WIR5_CHLAA Length = 589 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 5/210 (2%) Query: 85 CGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY-KIYLLTIRSNMDVLTGLPGRRVL 143 G L+ + + + A +A + + AL + + + ++ D LTGL RR Sbjct: 373 IGALLVWSNHHDAYTMADLNALELLAATVAVALHNAFRFAQIQSQAITDNLTGLANRRHF 432 Query: 144 DESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYET 201 + ++ + + ++D+D FK +NDT+GH+ GD VLR +A RD + Sbjct: 433 LQVLHQEMERNRRYHTPVSIAMIDVDHFKQINDTFGHIAGDYVLREIARRCRQQLRDVDV 492 Query: 202 VYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE-- 259 + RYGGEEF +I+ E+A +A R+ ++ I IN T++ GV+ P Sbjct: 493 LARYGGEEFGLILPETTYEQALKATERLRTVLATTPIMIDGRQINPTISIGVASFHPTVY 552 Query: 260 EPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 +I ADRA+Y KQ GRNR + E Sbjct: 553 PDPSSLIADADRALYLAKQQGRNRVCGVQE 582 >UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desulfovibrio RepID=Q310L5_DESDG Length = 525 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 69/282 (24%), Positives = 116/282 (41%), Gaps = 15/282 (5%) Query: 11 ILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELP 70 + L + + A +W + + A+K Y + Q G+ G ++ P Sbjct: 242 VFLGVGEHTQAGLEWSQMLLKA-----AAKLSGVPVSGYTVEQLGQ-----GGAEDAPAP 291 Query: 71 YVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKI-YLLTIRS 129 ++ G +L + + A+ + + + +++ Sbjct: 292 GKVILLPLKMRDETLGCLALLTEDDCQLGKDQVQVLHSAMRHLALAVKNALLFREMRLQA 351 Query: 130 NMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 + D LT L RR D +L L LM+LDID FK +ND +GH GD VLR Sbjct: 352 DHDGLTQLHNRRHFDTRLREELDRHGRYSMPLTLMMLDIDYFKQINDRFGHQAGDAVLRE 411 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 LA+ L R + RYGGEEF+ I+ ++++A R+ + +++ H I Sbjct: 412 LASVLRETIRTTDYCARYGGEEFVAILPHTDEQQARVLAERLRKNIESRVFRHHGKTIQA 471 Query: 248 TVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCMFI 287 TV+ G++ P P D ++ AD A+Y K GRN Sbjct: 472 TVSIGLTGFKPGALTPRDELVREADAALYLAKANGRNVVCTF 513 >UniRef50_Q1MZ89 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q1MZ89_9GAMM Length = 577 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 68/289 (23%), Positives = 118/289 (40%), Gaps = 14/289 (4%) Query: 9 DAILLNLNKAIDAHYQWLVSMFHSVVARDA---SKPEITDNHSYGLCQFGRWIDHLGPL- 64 D ++ L + +L ++ ++A A ++ S +F + Sbjct: 266 DLVVSALGSEQEEFEAFLKNLNERLLALKAWLKQGEDLEQKFSDSSTEFDLKMRGHLDEL 325 Query: 65 -DNDELPYVRLMDSA-HQHMHNCGRELMLAIVENHWQD----AHFDAFQEGLLSFTAALT 118 E M A Q + + L +E ++ H L + L Sbjct: 326 KQILESGDTNAMKGAVTQQLDDVFATLDGFKLEQKSREIVFKEHIGELNNRLTTMEKELE 385 Query: 119 DYKIYLLTIR--SNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVND 174 + K L + + D LTGLP R D + + L L++ D+D+FK +ND Sbjct: 386 EAKEQLNQSQLKAMTDSLTGLPNRGAYDVYAQQEYERYKRYGGELSLIVCDVDKFKSIND 445 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 TYGH GD VL+ ++ + TR+ + + RYGGEEF++++ E+A +I + V Sbjct: 446 TYGHQAGDKVLQLISRQVKKGTRETDLLARYGGEEFVVLLPETKQEDAVSVAEKIIEAVA 505 Query: 235 NHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 + IT++ GV+ + V AD A+Y K+ GRN+ Sbjct: 506 TSPFHFRGKRVQITISCGVASFKKGYRPEQVFDAADAALYRAKENGRNQ 554 >UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammaproteobacteria RepID=B8KJJ5_9GAMM Length = 540 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 72/286 (25%), Positives = 116/286 (40%), Gaps = 11/286 (3%) Query: 7 EIDAILLNLNKAIDAHYQWLVS-----MFHSVVARDASKPEITDNHSYGLCQFGRWIDHL 61 EI A+ +L + Y W S + SV + +T F R Sbjct: 245 EIAALQTSLQRNRRNFYVWEFSVTVLILLLSVPVFLWTLSSVTSPLKNLAAIFRRLAAGS 304 Query: 62 GPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYK 121 D + RE + + + T L + K Sbjct: 305 EESVVDAAVTKDEIGDLFNAAEAFRRENIRERELLADYRELSRTLEAKVTQRTREL-EAK 363 Query: 122 IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHL 179 L +++D LT RR LD++ +L A+ L ++L+DID FK VND YGHL Sbjct: 364 NEELDHLASVDKLTDTFNRRALDKALLAELERADRYQRPLSILLMDIDLFKQVNDEYGHL 423 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 GD VL TL+ + R + + R+GGEEF++I + E+A ++ Q ++ Sbjct: 424 TGDKVLVTLSQTIRENLRASDILGRWGGEEFLVICPETDLEQARNVAEKVRQAIEGTDFE 483 Query: 240 HSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + IT++ G+S + ++ AD+A+Y+ K GRNR Sbjct: 484 LGK---TITISIGLSVLIEGTSAESLVAEADKALYQAKSQGRNRVC 526 >UniRef50_B2A6L1 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6L1_NATTJ Length = 340 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 78/302 (25%), Positives = 124/302 (41%), Gaps = 30/302 (9%) Query: 4 KTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGP 63 K T++D ILL++ + + S D +T + F G Sbjct: 53 KYTDLDLILLDIMMPDIDGIEVCKRINDSSHVSDIPVIIVT---ALNDSGFLERAFQAGA 109 Query: 64 LDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIY 123 +D P RL + + G + L+ ++ +E L T L + Sbjct: 110 IDFITKPVKRL-----ELLARVGSAIKLS------KEKRMRIVREQELEKTLKLLEETNK 158 Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIG 181 + +D LT L RR+ DE+ + R A NL ++LLDID FK ND YGH G Sbjct: 159 KFEKLATIDELTQLANRRLFDETMRGEWRRANRNGYNLSIILLDIDYFKNFNDAYGHQAG 218 Query: 182 DVVLRTLATYLA-SWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 D L+ +A L R + RYGGEEF +I+ + A +I Q ++ I H Sbjct: 219 DECLKAIAKKLKFLMMRPGDFAARYGGEEFAVILPETDLRGAHSVAEKIRQGIEELKIPH 278 Query: 241 SEGHIN--ITVTAGVSRAF-----------PEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 + + +TV+ GV+ A ++ + ++I AD A+Y+ K GRN + Sbjct: 279 CDSKVAQYVTVSLGVASADLKNCQGGRDQATDDEIKILIEHADEALYKAKDNGRNTIALM 338 Query: 288 DE 289 Sbjct: 339 QP 340 >UniRef50_C1DXV0 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DXV0_SULAA Length = 437 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 13/283 (4%) Query: 11 ILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELP 70 ++L+L +A H + +V D +++ Y +C+F +W++ G DE Sbjct: 152 MVLSLQEAAKIHIKNRNKFLKAVADGD--TDVLSNLPDYKICEFTKWLEEHGQKYIDEKS 209 Query: 71 YVRLMDSAHQHMHNCGRELMLAIVENHWQDAH-----FDAFQEGLLSFTAALTDYKIYLL 125 Y + H+ H ++ +N ++ + L L + + Sbjct: 210 YEEVW-HFHKLFHEKFEKIKHIYSKNKENNSLAVYLLLKDIENASLKLLFILNRISLDNV 268 Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDV 183 + + D LTG R +LD + ++ + ++++D+D FK +ND YGHL+GD Sbjct: 269 SKIALKDSLTGFFNRHMLDVLLSKETSRSKRHGYKISILMMDLDNFKNINDIYGHLVGDE 328 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VL + + + R+ + +RYGGEEF+I++ ++E A RI + V+++ E Sbjct: 329 VLMHFSRIVKNNLRESDYPFRYGGEEFLILLPHTDEEGALVVAERIRKSVESYKFPVIE- 387 Query: 244 HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 ITV+ GV + + I ADR +Y K+TG+NRC++ Sbjct: 388 --RITVSCGVREIKNLDNPYIDIEEADRYLYIAKKTGKNRCVY 428 >UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZCI9_GLUDA Length = 472 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 126/291 (43%), Gaps = 6/291 (2%) Query: 6 TEIDAILLNLNKAIDAHYQWLVSMFHSVV--ARDASKPEITDNHSYGLCQFGRWIDHLGP 63 + A+ +L++ + L+ ++V+ A PE +FG W+ + Sbjct: 170 YRLFALNQDLSREGEGQKAALLGWSYNVLRSLYVAKTPEDLQTMGLARSEFGLWVTYKVG 229 Query: 64 LDNDELPYVRLMDSAHQHMH-NCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKI 122 L + L+ + ++ + A G+ ++L Sbjct: 230 LLFEGTDISALLTGQIAKVDNELLPAILEDMAAERDISPALAALHAGVTEILSSLEVLFH 289 Query: 123 YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLI 180 + D LT + RR L ++LR A + ++ LDID FK +NDT+GH Sbjct: 290 ASRSSNDVEDPLTRVLNRRFLPSIISYELRVAHQTGRPMSVLFLDIDHFKHINDTFGHAA 349 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VL+ +A L +R + ++RYGGEEF++++ + E+ R+ Q ++N I Sbjct: 350 GDSVLQAIARVLEEASRLSDVIFRYGGEEFLVLMGDTDTEQMLIGAERLRQKIENTPIRL 409 Query: 241 SEGHI-NITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 +G++ ITV+ G ++ + ++ AD A+Y K+ GRNR D Sbjct: 410 PDGNLHQITVSIGAAQYAGHPDYEELLRAADAALYRAKRNGRNRIEVADAP 460 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 4/202 (1%) Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFD 148 + + E ++ L + + ++ L + D LTGL RR LDE+ + Sbjct: 436 ITRNVSERKAVESALRETNRQLHARIEEIGRLQVA-LQELAVRDSLTGLYNRRYLDETLE 494 Query: 149 HQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 ++ A + L L++LDID FK VNDTYGH +GD VLR LA+ L++ R + RYG Sbjct: 495 REVSRARREGIPLSLVMLDIDHFKQVNDTYGHQVGDEVLRILASTLSADIRAEDVACRYG 554 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA-FPEEPLDVV 265 GEEF+I++ E V+ ++ H I T++ GV+ + D + Sbjct: 555 GEEFLILLPNMPLETTMLRAQGWRSAVEALSVKHGNFQITFTISLGVAAYPEHGKTPDDL 614 Query: 266 IGRADRAMYEGKQTGRNRCMFI 287 AD+A+Y K GRN+ Sbjct: 615 TRCADQALYRAKNEGRNQVSVF 636 >UniRef50_Q47FN5 Response regulator receiver modulated diguanylate cyclase n=3 Tax=Betaproteobacteria RepID=Q47FN5_DECAR Length = 313 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 79/254 (31%), Positives = 118/254 (46%), Gaps = 11/254 (4%) Query: 43 ITDNHSYGLCQFGRW--IDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQD 100 + H + + G W I L LD+D + ++H E++L Q Sbjct: 61 VVAQHIRAMEKPGDWAPIIFLSSLDDDANIEKGIAAGGDDYLHKPISEIVLGAKIRAMQR 120 Query: 101 AHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN-- 158 + LL+ T L D L S+ D LTG+ RR DE+ + R A + Sbjct: 121 IVL--MRASLLAVTRKL-DAANQELIRISSTDSLTGVANRRYFDEAMSIEWRRARRHSNS 177 Query: 159 LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAA 217 + L++ DID FKL NDTYGH GD LR +A ++ T R +TV RYGGE+F +I+ Sbjct: 178 IALLMCDIDYFKLYNDTYGHQAGDECLRKIAAAISRHTERPSDTVARYGGEKFAVILPET 237 Query: 218 NDEEACRAGVRICQLVDNHAITHSEGH-INITVTAGVSRAFPE--EPLDVVIGRADRAMY 274 + A +I Q ITH+ + ++ G++ A P P D +I AD+A+Y Sbjct: 238 SIGGALMVAEKIRQATKELNITHASSPTGQVGLSIGIASAAPGFDNPPDDLILAADKALY 297 Query: 275 EGKQTGRNRCMFID 288 K+ GR+R D Sbjct: 298 RAKKEGRDRVYRAD 311 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 6/230 (2%) Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 +LP + + +A+ N L L V+ + + S Sbjct: 69 KQDEQIKDLPVI--LVTANGDDQNVVDGLDLGAVDYVIKPYSLSVLLARVRSALRE--KE 124 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGH 178 ++ L+ + D LTGL RR E +L + + ++LDID FK VND YGH Sbjct: 125 RLDLMEKWATTDPLTGLYNRRFFFEQAQRELERVQRNETDASFIILDIDHFKKVNDEYGH 184 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 L+GD VL LA R + R+GGEEF+I + + E A R + V+ + Sbjct: 185 LVGDDVLEGLAKLFKETFRKVDLCCRFGGEEFVICLPDTDTEGALLVAERTRKKVEELSF 244 Query: 239 THSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 +G +++T++ GVS A L+ ++ RAD A+Y+ KQ GRNR +D Sbjct: 245 NTEKGPLHVTISLGVSSANENTTLEDMLKRADDALYQAKQNGRNRTESLD 294 >UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTU2_DESBD Length = 339 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 7/233 (3%) Query: 58 IDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAAL 117 ++ L L V+ H+ R+L +V + + + +L T L Sbjct: 100 LNGSQRLFETLLVPVKDEAGTITHIWGMARDLTRFLVSQNALVHLNEQLEAKILQRTREL 159 Query: 118 TDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDT 175 + + L+ S D LTG+ RR D + + + L L++LDID FK ND Sbjct: 160 EEA-NHRLSELSLTDGLTGIANRRRFDAALAEEWSRSARTGSTLALIMLDIDHFKKYNDH 218 Query: 176 YGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 YGH GD LR +A L S R + V RYGGEEF +I+ A R+ + V+ Sbjct: 219 YGHQQGDDCLRRVAEVLRSSARRQGDLVSRYGGEEFCMILPDTALPGAFEIAERLRREVE 278 Query: 235 NHAITHS-EGHINITVTAGVSRAFP--EEPLDVVIGRADRAMYEGKQTGRNRC 284 N + H +T + GV+ + P ++ RAD ++Y+ K GRN Sbjct: 279 NMDMPHVLSDVGRVTASMGVAASMPCKAMSPAELLRRADESLYQAKSEGRNCV 331 >UniRef50_A1KC37 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KC37_AZOSB Length = 475 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 66/295 (22%), Positives = 120/295 (40%), Gaps = 7/295 (2%) Query: 2 IKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHL 61 I + + + N++ + L+ + + + + FG W+ H Sbjct: 180 IDEAYRVFSYGQNMSLERERQRASLLDWENRFLQAMMAGQSGDELPLISDSAFGLWLQHK 239 Query: 62 GPLDNDELPYVRLMDSAHQHMHN----CGRELMLAIVENHWQDAHFDAFQEGLLSFTAAL 117 + + + + + R+ M ++ E A Q L + Sbjct: 240 AVAVFEGSAELPSIREGMRRLDRDLIPLCRQQMESLDERGESRRLIKAVQSELGQLKFLI 299 Query: 118 TDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQ--LRNAEPLNLYLMLLDIDRFKLVNDT 175 + + S D LT L RR L + + + + L+L+D+D FK +ND Sbjct: 300 GAMFERFVDLESGKDALTQLLNRRFLPAILTRETEIARNQHKSFALLLVDVDHFKQINDV 359 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 +GH GD VL+ +A+ L + R + V+RYGGEEF++++ + + A R +I Q V Sbjct: 360 HGHDAGDRVLQQIASLLLNTVRSGDFVFRYGGEEFLVLLVEVDRQHAARVAEKIRQRVQQ 419 Query: 236 HAITHSEGH-INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 + + +T + GV+ +I +AD A+Y K GRNRC F + Sbjct: 420 ETFLLPDSRQLQVTASVGVALHDGHPDYQRLINQADDALYRAKTGGRNRCEFATD 474 >UniRef50_Q2BRK2 Signaling protein with a GGDEF domain n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRK2_9GAMM Length = 330 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 7/301 (2%) Query: 1 MIKKTTEIDAILL--NLNKAIDAHYQWLVSMFHSVVARDASKP-EITDNHSYGLCQFGRW 57 ++++ + ILL ++ ++ H+ WL + ++ R K + C FG W Sbjct: 5 LLERIDHEEFILLSEDIKSSLAEHHIWLQRINLAIATRTPIKEHSFIAEDGHRHCHFGLW 64 Query: 58 IDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDA-FQEGLLSFTAA 116 + ++ + + P ++ H +H G EL+ ++ H D A F + F A Sbjct: 65 LANIMAEEEFDSPIFDQINQLHVKLHLKGSELIYSLDLGHPLDESLYASFLDTQRQFFNA 124 Query: 117 LTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN---LYLMLLDIDRFKLVN 173 + + + + D T L RR + H+ + E + + DIDRFK N Sbjct: 125 VLELLEFSVISTHQFDPTTKLMNRRSIHSILAHEKQRMEKTKDTVCAIAMADIDRFKAFN 184 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 D YGH +GD VL +A+ S R Y++V R+GGEEF+ ++ ++A R+ + + Sbjct: 185 DRYGHDLGDKVLEHVASVFNSAIRRYDSVARFGGEEFLFVLPDMTIKDATNTIERVRKKL 244 Query: 234 DNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVI 293 I G + +T + G+++ P + + RAD A+YE K GRN C+ +D ++ Sbjct: 245 STSPIESEFGPLAVTASFGITQLCPHCNTEGSLKRADVALYEAKARGRNLCVSVDASKLL 304 Query: 294 N 294 Sbjct: 305 Q 305 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 15/218 (6%) Query: 74 LMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYK--IYLLTIRSNM 131 M + H++ H EL L+ V +++ K LL +S Sbjct: 486 EMKTRHKNGHEIDVELSLSAVRIKDSWHAI--------GIIRDISERKRFEELLYRQSIT 537 Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LT + RR + + ++ + L++ D+D FK VND +GH GD+VL+++A Sbjct: 538 DPLTNIYNRRFFMQMLEQEIERVKRNKKLFSLIMFDLDHFKNVNDRFGHAAGDMVLKSVA 597 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + R + R+GGEEFII++ + A + + + + +G +T Sbjct: 598 DTVKGRIRKTDYFARWGGEEFIILLPETSLNNAAELAEELRKKISETEL---DGIGKVTA 654 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 + GV+ + +D V+ R D A+YE K +GRN Sbjct: 655 SFGVTEYRNTDTVDTVLLRVDGALYEAKGSGRNCVKIA 692 >UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRL2_PSYIN Length = 611 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 18/267 (6%) Query: 23 YQWLVSMFHSVVARDASKP-EITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQH 81 W + M +V+ P + + S GLC + L + + + Sbjct: 356 SIWSLGMILAVLQHIGMIPVTLYSDLSTGLC----FSIEAALLSFALADRFNQLRNEKEE 411 Query: 82 MHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRR 141 + ++ ++ + T L K + + D LT + RR Sbjct: 412 IE---------LIHIEHLKNDQQLLEQLVTERTEELEQAKDRA-ELLARTDPLTNMLNRR 461 Query: 142 VLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDY 199 E +++ + +L +M++D+D FK +ND YGH GD L ++A L + R+ Sbjct: 462 AFFECGSVEIKRSLRYKSSLAIMMIDLDHFKSINDNYGHAAGDNALLSVANTLKAMIRNV 521 Query: 200 ETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAF-P 258 + + R GGEEF +I+ A+ E A R+ ++ I + IT GV+ Sbjct: 522 DIIGRIGGEEFAVIIPHADLEIATELAQRLRLGIEKVEIIIDNQPVKITACFGVTSIDIK 581 Query: 259 EEPLDVVIGRADRAMYEGKQTGRNRCM 285 E LD + RAD+A+Y K+ GRNR Sbjct: 582 SESLDEALKRADKALYLAKENGRNRVE 608 >UniRef50_Q216C5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodopseudomonas palustris RepID=Q216C5_RHOPB Length = 735 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 5/211 (2%) Query: 82 MHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRR 141 L +I+ + ++ + + L +++ D LTG+ RR Sbjct: 517 FLGIVITLQFSIMALFYFYGREHGIRDSIHTEKRIELQELARGLQVQATTDPLTGMFNRR 576 Query: 142 VLDESFDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDY 199 V +E +L + +L DID FK +ND +GHL+GD VL L+ L+ R Sbjct: 577 VFNEGLAAELVRFNRQQTPFSSLLCDIDHFKEINDVHGHLMGDQVLVHLSRILSRSVRQT 636 Query: 200 ETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE 259 + + R+GGEEF I++ A+ A ++ + + N+T + GV+ Sbjct: 637 DFLARWGGEEFGILLVGADQTAAVEFAEKLRTTIAYTVF---DDVGNLTCSFGVAECVLG 693 Query: 260 EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 + + ++ R D A+Y K GRNR Sbjct: 694 DTPESLLARVDNALYRAKMNGRNRVELAPPP 724 >UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4Y784_SHEPC Length = 368 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 120/262 (45%), Gaps = 22/262 (8%) Query: 29 MFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRE 88 + +S++ + + T + S L +FG + +++ +Q + E Sbjct: 121 LINSLLCKIVQLNQGTADFSGTLAEFGIKLQS-----------NSDINTLNQLVDGVMDE 169 Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFD 148 + ++ N + +A + + + + + L++ + D LT L RR + + Sbjct: 170 MQSLLINNQNMEQSLNAMGQEVQHLKSEMEN-----LSLAAMTDQLTSLYNRRAYEIAIQ 224 Query: 149 HQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 + A+ + L+++DIDRFK NDTYGH IGD VL +A L R + V RYG Sbjct: 225 DHIHRAQEQHSRCSLLIVDIDRFKQFNDTYGHQIGDKVLAYVALALKQCVRGDDFVARYG 284 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH----INITVTAGVSRAFPEEPL 262 GEEF++++ + +A + + + + +T + ITV+ G++ + Sbjct: 285 GEEFVVLLPNTHFHDALQVAETLRERISERHLTIGKDKKLSLGAITVSIGLASLQEGDDA 344 Query: 263 DVVIGRADRAMYEGKQTGRNRC 284 + + RAD+A+YE K GRN Sbjct: 345 ETLFSRADKALYEAKSDGRNCV 366 >UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N773_9GAMM Length = 462 Score = 256 bits (654), Expect = 8e-67, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 7/279 (2%) Query: 11 ILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELP 70 + ++N H + + + R A I + L + + I ++ Sbjct: 189 TVPSINYQTLKHGISHIKINGILDQRYAMSVGIRSDLPLLLSIYNKAIAVTTEETRQQIL 248 Query: 71 YVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSN 130 L S HQ++ ML ++ + L++ L S Sbjct: 249 NNWLSLSFHQNVDLTWLWRMLIVIAVVVALFFYRYL---LVNQHNRELQRVNKKLEQLSQ 305 Query: 131 MDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 D LTG+ R LD++F +L + +++LDID FK +ND+YGH++GD V++ + Sbjct: 306 RDHLTGIHNRYYLDQAFQQELTRYKRYQHGFTIVMLDIDLFKQINDSYGHVVGDDVIKQI 365 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 A L RD + V R+GGEEF+I+ + + A + +L+ T I++T Sbjct: 366 AMLLREHVRDQDVVARWGGEEFLILNPETSLDGARTLAEHLRRLIRRTPFTVD--KIDVT 423 Query: 249 VTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 V+ GV+ E ++ +I RAD A+Y+ KQ+GR++ + Sbjct: 424 VSFGVTDYRAGEDIETMIQRADSALYQAKQSGRDKTVVF 462 >UniRef50_Q1K485 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K485_DESAC Length = 370 Score = 256 bits (654), Expect = 9e-67, Method: Composition-based stats. Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 7/238 (2%) Query: 55 GRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFT 114 + I D+ Y + +L+L+ E Q L+ Sbjct: 128 NQKIRSQQRNDDGVEIYFAGKKHVINSERSQILDLLLSTYEGALQQKRELERMNEQLNEA 187 Query: 115 AALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLV 172 + + + D LTG R +E+F +R A+ +L L++ DID FKL+ Sbjct: 188 LDTIKKRNAEIAELAVRDSLTGSFNRGYFNETFPGAIRRAQRYQQSLSLIMCDIDHFKLI 247 Query: 173 NDTYGHLIGDVVLRTLATYLASWTRDY-ETVYRYGGEEFIIIVKAANDEEACRAGVRICQ 231 ND YGH GD V++++A LA R + + RYGGEEF+I++ N E A R+ + Sbjct: 248 NDHYGHQTGDRVIKSVAQGLAQSLRQGVDWLARYGGEEFVIVLPETNLEGALVVAERMRR 307 Query: 232 LVDNHAITHSEGHINITVTAGVSRAFPEE----PLDVVIGRADRAMYEGKQTGRNRCM 285 + + I I +T + GV+ PE + +I ADR +Y+ K+ GRN C Sbjct: 308 SIADQEIACDPQSIRLTASFGVAGCDPEHASMLTGNGMIAAADRCLYQAKKEGRNCCC 365 >UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgaris RepID=B8DLV9_DESVM Length = 381 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 2/184 (1%) Query: 103 FDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLY 160 F E T L L + D LTGL RR L E +++ A L Sbjct: 177 FAGLAEYTRRHTQRLLILLTQQLAESARTDELTGLANRRALCERLEYEQVRARRTGRPLS 236 Query: 161 LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDE 220 + + DID FK VND YGH GD+VL+++A L R +T+ R+GGEEF++++ ++ Sbjct: 237 IAICDIDHFKSVNDCYGHQCGDLVLQSVAGLLHDNLRHQDTICRWGGEEFLLLLPETDEA 296 Query: 221 EACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTG 280 A R ++ LV+ ++ +++T++ GV PE +D I +AD+ +Y K+ G Sbjct: 297 GAARLAEKLRSLVEAMEYSYHGIPVSVTLSFGVHTCGPEGDIDYHIRKADQKLYLAKEQG 356 Query: 281 RNRC 284 RNR Sbjct: 357 RNRV 360 >UniRef50_Q1MYJ5 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Bermanella marisrubri RepID=Q1MYJ5_9GAMM Length = 642 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 13/232 (5%) Query: 71 YVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIY------L 124 R +D AHQ + + H + ++ + T L++ Sbjct: 408 QARSLDLAHQVTQEREKLYRAEMENLKIAREHNEVLEKTVDDRTKELSEALEELSNAHEK 467 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLY--LMLLDIDRFKLVNDTYGHLIGD 182 L S D LT + R D+ + + + A + L++LDID FK VND +GH GD Sbjct: 468 LKNISVTDALTKIHNRYFFDQHWRSEFKRAHRHKMSIALIILDIDHFKKVNDNFGHPAGD 527 Query: 183 VVLRTLATYLA-SWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 + L+ +A + R+ + V R GGEEF +I+ ++ A +I ++ I+ Sbjct: 528 LCLQKVAQSIRIQANRESDLVCRLGGEEFAVILPGTDEMGAYEVAEKIRHTIEKRHISWE 587 Query: 242 EGHINITVTAGVSRAFPEEPLDV----VIGRADRAMYEGKQTGRNRCMFIDE 289 I ITV+ G+S P + + + +AD+A+Y+ K GRNR + + Sbjct: 588 GKTIKITVSIGISAMTPRKSDEKMRNIMFNQADQALYQAKGNGRNRTVIFES 639 >UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJ36_DESVM Length = 698 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 104/274 (37%), Gaps = 22/274 (8%) Query: 40 KPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNC-------------- 85 + + H L F LD+ +P + + Sbjct: 407 TINVLNQHGAALLGFRDVAHARAVLDDSVIPLYAEPMDRQAMLDDLTAGEVVTGLRLRWY 466 Query: 86 ---GRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRV 142 G + +++ + L T + D L + D LTG+ RR Sbjct: 467 RRGGEAIWVSLYARRTGTPEAPEVESFFLDVTDQVEDTL--RLEQLATTDELTGVANRRH 524 Query: 143 LDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYE 200 + + A+ L ++LLD D FK +NDT+GH GD+VLR + + R+ + Sbjct: 525 FMARLEDEAARAQRYGRPLSVLLLDADHFKSINDTWGHEAGDMVLRHITDVMGLSLREND 584 Query: 201 TVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFP-E 259 + R GGEEF +++ E A R RI V++ + + + TV+ G + Sbjct: 585 LIGRLGGEEFGVLLPETAQERALRTAERIRAAVEDAPVAVRDVWVGCTVSVGAAEYRGAN 644 Query: 260 EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVI 293 + LD +I RAD + K+ GRNR + Sbjct: 645 DSLDDLIRRADHMLMRAKEEGRNRVCAQQARPAC 678 >UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6Y0_KANKD Length = 469 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 5/195 (2%) Query: 97 HWQDAHFDAFQEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA 154 + Q F AL + K L + D LT + RR + + ++ + Sbjct: 266 YSQTELFQQIIREKKKSERALIELKAVNQKLEELAATDSLTRVANRREFMKRSEEEMSRS 325 Query: 155 EPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFII 212 + L LM++D D FK +ND YGH GD VL+ R + + R GGEEF + Sbjct: 326 SRNSTDLCLMVIDFDHFKEINDQYGHQAGDKVLKDFVKLAKEVMRPSDLLGRIGGEEFAL 385 Query: 213 IVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADR 271 ++ N A + R+ Q ++ +I I +T++ GV+ P+ + + + RAD Sbjct: 386 LLPETNIRSAVKVAERLRQHIEEESIVIGSKRIKLTISIGVAEYQPKVDTVKKWLHRADE 445 Query: 272 AMYEGKQTGRNRCMF 286 +Y+ K GRNR + Sbjct: 446 FLYQAKDKGRNRVVV 460 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 4/203 (1%) Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFD 148 + I E +A + + L + ++ L ++ D LTG RR LDE+ + Sbjct: 516 IARDISERRRSEAELRSANDKLRKQLEEIEKLQVA-LREQAIRDSLTGCFNRRYLDETLE 574 Query: 149 HQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 +L + L L++LD+D FK +NDTYGH+ GD L LA L + R + + RYG Sbjct: 575 RELSRSRREGYPLSLLILDLDHFKRINDTYGHMAGDQALIVLAETLRAGIRHEDVLCRYG 634 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA-FPEEPLDVV 265 GEEF+I++ A + +T ++ T +AGV+ + D + Sbjct: 635 GEEFVILMPRMPLAIAAERAELWRSKIAEIRVTFGNFELSFTASAGVAAYPDHGKMPDEL 694 Query: 266 IGRADRAMYEGKQTGRNRCMFID 288 AD+A+Y K GRNR + Sbjct: 695 TQAADQALYTAKNEGRNRVVVYS 717 >UniRef50_Q6AMZ3 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AMZ3_DESPS Length = 330 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 10/239 (4%) Query: 57 WIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAA 116 + + +P ++ +S ++MH + I + + L A Sbjct: 74 FTNSQIDKYIIPIPLNKITNSRFRYMHQD-----VVITPLGSDEISVIIYDTTALLEAKA 128 Query: 117 LTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVND 174 + ++ ++ +++ D L G R++ ++ ++ A L+++DID FK VND Sbjct: 129 TINEQLDIVKKQASTDPLLGCYNRKMFNDLLATEVMRANRHNHPFSLIMIDIDNFKSVND 188 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 TYGHL+GD VL+ L++ A R+ + R+GGEEFII++ A +I + Sbjct: 189 TYGHLVGDEVLKGLSSLTAKSIRESDLFARWGGEEFIILLPETYLTGAAVVAEKIRLNIA 248 Query: 235 NHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVI 293 N+ + T + GVS +++I AD+A+Y K G+N+ M ++ I Sbjct: 249 NYD---NGTAGKRTCSFGVSEFSIGTNPEILINNADKALYAAKGNGKNQVMLYRDEQNI 304 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 7/187 (3%) Query: 107 QEGLLSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLM 162 E ++ +T K L ++ D LT R + D + R A+ L+ Sbjct: 608 IEYYIAMFHDITRQKELEAALEHQAFYDPLTDAANRGYFETLLDQEARRAQRYAHPCSLL 667 Query: 163 LLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEA 222 LLDID FK +NDT+GH +GD VLR L L R+ + + R+GGEEF++++ + E Sbjct: 668 LLDIDHFKRINDTFGHEVGDEVLRFLVHALKGRLREADVLGRWGGEEFVVLLPGTDAERG 727 Query: 223 CRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 ++ + V A +T++ GV+ P E + + RAD AMY K+ GRN Sbjct: 728 QHVAEQLREQVTATAFPCVGL---VTISLGVAECRPGESIRDWVKRADEAMYVAKKGGRN 784 Query: 283 RCMFIDE 289 R + +D+ Sbjct: 785 RVVRLDD 791 >UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepID=Q21NS3_SACD2 Length = 319 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 58/241 (24%), Positives = 95/241 (39%), Gaps = 6/241 (2%) Query: 52 CQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLL 111 F W + R + M+ + L + + + Sbjct: 82 SAFTTW---EQRPYLFKFKNYRPVTGIADFMYQNSTIIPLKDTRGKVEHICLIVYDVTEV 138 Query: 112 SFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRF 169 + L S D LTGL R+ + + + + + L++ DID F Sbjct: 139 AVNRLQIQAANLQLHEISRTDGLTGLLNRKTWELDAEQEYKRFKRHEHPCSLVMFDIDHF 198 Query: 170 KLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRI 229 K +ND+YGH GD V+R A + S RD + RYGGEEF I++ + E A RI Sbjct: 199 KNINDSYGHPAGDEVIRQTAAAVKSCIRDIDIAGRYGGEEFTIVLSDTDTEGALVVAERI 258 Query: 230 CQLVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + + + + I TV+ GV++ + I AD+A+Y+ K+ GRN + Sbjct: 259 RNQIQELTVHYEDFAIQFTVSLGVAQLTQQMTNRTAWIDCADKALYQAKKNGRNNSVVYT 318 Query: 289 E 289 Sbjct: 319 P 319 >UniRef50_C1SIQ7 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SIQ7_9BACT Length = 312 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 64/274 (23%), Positives = 112/274 (40%), Gaps = 11/274 (4%) Query: 24 QWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMH 83 + L + +V + D + +C+ + + + + Sbjct: 41 EALEYLVKNVPDMVLLDVMMPDMDGFEVCKTLHARAETKGIPVIFITAKSEPEDIVKGFQ 100 Query: 84 NCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLL-------TIRSNMDVLTG 136 G + + + E L L + K L + D LTG Sbjct: 101 MGGVDYVTKPFNEAELLMRINTHME--LKRARDLLEEKNKELIEAYDKIEHLALTDTLTG 158 Query: 137 LPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLAS 194 + RR + + + L++ DID FK VNDTYGH GD VL+T++ + Sbjct: 159 IANRRNITNMLGKEAARCKRNKGKFSLIMCDIDFFKRVNDTYGHDAGDYVLKTISHVIQQ 218 Query: 195 WTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVS 254 R+ + V R+GGEEF+I++ + A ++ + N +++ ++T+T GVS Sbjct: 219 ALREQDIVARWGGEEFLIVLPETDAGNAVAVAEKLRTAIGNTEMSYEGISFSVTMTFGVS 278 Query: 255 RAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 ++ I +AD A+YEGKQTGRN+ + D Sbjct: 279 EYDVSLGIEKSIKKADDALYEGKQTGRNKVVRSD 312 >UniRef50_A1S6F8 Diguanylate cyclase n=2 Tax=Shewanella RepID=A1S6F8_SHEAM Length = 355 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 126/272 (46%), Gaps = 21/272 (7%) Query: 20 DAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAH 79 + H + + + ++++ + ++ + FG+ + + +S H Sbjct: 102 NVHLE-TQLLINGLLSKISLLTSGSETFQLAIESFGQQLR-----------LPQEAESLH 149 Query: 80 QHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPG 139 + + E+ + EN + + + L A +T+ L++ S D LTGL Sbjct: 150 RLVEGVLVEVDKVVSENADIHSSLKSMDQELNHLRAEITE-----LSVISLTDKLTGLNN 204 Query: 140 RRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDY 199 RR + + + P L+++DID FK NDT+GH GD VL +A L + Sbjct: 205 RRAFESRLAQEFLPSTP-KCSLLVIDIDHFKQFNDTWGHNAGDKVLVYVAQNLKQAVKGE 263 Query: 200 ETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI---NITVTAGVSRA 256 + V RYGGEEF+I++K + E+A ++ + N +T + ++ ++V+ GV++A Sbjct: 264 DLVARYGGEEFVIVLKDTSAEDAANIAEKLRDRIANKKLTLKKDNLDLGKVSVSIGVAKA 323 Query: 257 FPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + E + RAD A+Y K TGRNR D Sbjct: 324 YANETPEQFFERADGALYRAKGTGRNRVCLAD 355 >UniRef50_A8UZ69 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZ69_9AQUI Length = 419 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 136/280 (48%), Gaps = 8/280 (2%) Query: 12 LLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPY 71 + L+ + H+ WL + + + SKP I N + +C+FG+ I++ L Y Sbjct: 143 VSILSGYVKDHFIWLNKLLEDIK-KLRSKPSIELNPN--ICEFGKKINNGDLDSILTLKY 199 Query: 72 VRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLL--TIRS 129 ++ H +H E+ I + +++ + + T ++ + + Sbjct: 200 KDIVKRIHDSIHQSANEIYFFIEKRAFKNLLIEYINLFKNTSRLVSTIALVHSVSSEAEA 259 Query: 130 NMDVLTGLPGRRVLDESFDHQ--LRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 N+D LT L RR ++ +Q L + + L D+D FK +NDTYGHL+GD VL+ Sbjct: 260 NIDPLTHLFNRRAMEIILTNQYTLSKITGNDFVIGLADMDDFKKINDTYGHLVGDCVLKE 319 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 +A + S R + V+RYGGEEF+I++ EA + ++ Q + I I+I Sbjct: 320 VAVRIKSVLRKSDFVFRYGGEEFLILLPYTTKREALKVLEKVRQSIIAEPIKCKNNMIDI 379 Query: 248 TVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCMF 286 T++ G + E L+ +I AD+ +Y+ K+TG+N+ + Sbjct: 380 TISIGAASLTENPEYLEKLIELADKRLYKAKRTGKNKVVV 419 >UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1B3_ACIDE Length = 445 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 2/203 (0%) Query: 90 MLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDH 149 M+A++ + ++ L + +D LT + RR + Sbjct: 234 MVALLSQFVVLEATLSLVLMAFGALMLTNEHITRELRHLAEVDPLTNVFNRRAFLTLLEK 293 Query: 150 QLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGG 207 + NA+ L ++++D+D FK +NDT+GH GD VLR R + + R GG Sbjct: 294 AISNAQRTQSGLPVLVIDLDHFKKINDTWGHQSGDEVLRHFVALANGCLRKEDVMGRLGG 353 Query: 208 EEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIG 267 EEF I + A+ E + R+ LV +H G I +TV+ GV++ E D V+ Sbjct: 354 EEFAIFLPNASSEGSQAVAERLRALVAHHPAMTGRGPIALTVSIGVTQYGGGETSDFVLQ 413 Query: 268 RADRAMYEGKQTGRNRCMFIDEQ 290 RAD AMY K+ GRNR + Sbjct: 414 RADEAMYRAKERGRNRVETLSPP 436 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 5/197 (2%) Query: 98 WQDAHFDAFQEGLLSFTAALTDYKIYL-LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP 156 + + A+ + K+ L +S D LTGL RR L++ F ++ A+ Sbjct: 769 ISSDQQQLAKAVAEQVSLAIANIKLRERLENQSIRDPLTGLFNRRYLEQFFLQEIGRAKR 828 Query: 157 L--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIV 214 ++ +++ DID FK ND GH GD VL+T+ L S R + RYGGEE I++ Sbjct: 829 YNHSIGVIMGDIDHFKQFNDQLGHDAGDHVLKTIGRILQSNIRGSDIACRYGGEEMTIVL 888 Query: 215 KAANDEEACRAGVRICQLVDNHAITHSEGHI-NITVTAGVSRA-FPEEPLDVVIGRADRA 272 + E+ + Q + + + + + +TV+ GV+ E + +I ADRA Sbjct: 889 PQTSLEDTLVKAESLRQAIASMEVEYKGKELGTLTVSLGVACYPNHGETMVNIIQAADRA 948 Query: 273 MYEGKQTGRNRCMFIDE 289 +Y+ K GRNR + DE Sbjct: 949 LYQAKAAGRNRVVMADE 965 >UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX32_DESOH Length = 396 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN---LYLMLLDIDRFKLVNDTYGHLIGD 182 S +D LT L RR E + +L + + + +++DID FK +NDTYGH GD Sbjct: 226 RKMSTVDGLTRLTNRRTFIERSEKELSSGQRRPSSHISCIMIDIDHFKAINDTYGHAAGD 285 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 VL +AT L R + V RYGGEEF +++ A A + R + N I Sbjct: 286 KVLVKIATILTEKARPTDEVGRYGGEEFAMLLPATTLAGAVKVAERQRASIANAEIIVDG 345 Query: 243 GHINITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 I +T + GV+ + + ++ ++ AD A+YE K+ GRNR + + Sbjct: 346 NIIQVTASFGVASCPSDDIDNINELLKTADVALYEAKRAGRNRVVAAAGEK 396 >UniRef50_Q2RLY1 Diguanylate cyclase (GGDEF domain) n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLY1_MOOTA Length = 357 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 3/226 (1%) Query: 65 DNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL 124 +N P + + LM+ +V Q A A + ++ Sbjct: 123 ENLANPSSWAILGGWVAIAGFFYYLMVGLVVKARQAASLQA-EVEYTRHEYQEACKRLAA 181 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQL-RNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDV 183 + + + D LTG+ R ++F + L +P L +++LDID FK +ND YGHL G+ Sbjct: 182 MEMAAITDDLTGIYNYRYFVQAFSNLLNSRQQPRYLAVLMLDIDYFKEINDAYGHLTGNR 241 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VL LAT L TR+ + V R+GGEEF +I+ + A + RI + + H Sbjct: 242 VLAELATILKECTREQDVVTRFGGEEFALILPDTDYHGALQVAERIRKAIAEHTFQAEGT 301 Query: 244 HINITVTAGVSRAF-PEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 I++TV+AGV+ +I RADRA+Y+ K TGRN Sbjct: 302 AIHVTVSAGVAVWPVDGTDKKDIIARADRALYQAKTTGRNSVCAYQ 347 >UniRef50_A8UV88 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UV88_9AQUI Length = 475 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 58/233 (24%), Positives = 108/233 (46%), Gaps = 8/233 (3%) Query: 67 DELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY------ 120 ++ ++ M + + + V + +L+ L Y Sbjct: 239 RDITMLKNMAYKFKELDFSDIPKLSEQVRKDRTRDELFTLKSSVLNMAQELEAYIKELEK 298 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGH 178 K + D LTGL RR E+ + ++ L L+++DID FK +ND YGH Sbjct: 299 KKEKFEELAYTDPLTGLNNRRFFMENARTIIDLSKRYREPLSLLMMDIDNFKSINDNYGH 358 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 +GD+VL+ LA + R + R+GGEEF++++ +++ A RI N ++ Sbjct: 359 DVGDLVLKKLAEVIRKNVRTSDIPARFGGEEFVVLLPRTDEKGALMVAERIRNEFRNSSV 418 Query: 239 THSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 I +V+ G+S E+ +D +I +AD A+Y+ K++G++R + E++ Sbjct: 419 KVDGKDIWTSVSIGLSVLSEEDDIDSLIKKADEALYQAKRSGKDRVVIYREED 471 >UniRef50_Q2BKU0 Sensory box protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKU0_9GAMM Length = 342 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 14/283 (4%) Query: 20 DAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYV-RLMDSA 78 D H + + + V + I G F WI+ G + + M A Sbjct: 63 DDHDRVMGHF-EAYVQGLIPEYNIQYRCLKGDGSF-LWIEDSGRIVERSAEGSPQRMIGA 120 Query: 79 HQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTD------YKIYLLTIRSNMD 132 H ++H ++ ++ + T L K+ + + ++ D Sbjct: 121 HTNIHAQKTLQQKLEEQSKLLRGEYENLDHIIQERTKELDQLNQQLARKVEEVEMLASRD 180 Query: 133 VLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLAT 190 LTG+ RR+ + D +++ A+ + ++L DID FK VND YGH GD VL +A Sbjct: 181 ALTGIYNRRMFESFLDIEIKRAKRYSQPMCVILADIDLFKHVNDRYGHSSGDKVLVEVAL 240 Query: 191 YLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVT 250 L R+ + + R+GGEEF II+ + A R+ V++ +T I++T + Sbjct: 241 TLQQHLRESDYLARWGGEEFAIILPNTATKVAMETAERLRHEVESL-VTTEG--ISVTCS 297 Query: 251 AGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVI 293 GV++ ++ + R D+A+Y K RN I + + Sbjct: 298 FGVTQFHQKDCGTSIFSRMDQALYMAKDQNRNTVRLIPPRPEV 340 >UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax=Pseudomonas fluorescens RepID=Q3KAB6_PSEPF Length = 559 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 65/230 (28%), Positives = 97/230 (42%), Gaps = 11/230 (4%) Query: 59 DHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALT 118 ++ VR + Q + + L+ E +A +A + TAALT Sbjct: 324 NNQPGAHFPLRHPVREIAQLGQSIDAMTQSLLAKERELQETNASLEA---TVAQRTAALT 380 Query: 119 DYKIYLLTIRSNMDVLTGLPGRRVLDESFDH--QLRNAEPLNLYLMLLDIDRFKLVNDTY 176 L + D LTG+ RR DE L L+L+D D FK +NDT+ Sbjct: 381 -LANAELLNLATHDGLTGVYNRRRFDEKLTEYSLLFRRTGRPFALLLIDADHFKRINDTH 439 Query: 177 GHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEA-CRAGVRICQLVDN 235 GH GD VLR LA + R + V RYGGEEF +++ + +I + Sbjct: 440 GHAAGDDVLRQLAQLIQISIRSTDFVARYGGEEFAVLLPEIAKPDTPDIVAEKIRSAIAE 499 Query: 236 HAITHSEGHINITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRC 284 +TV+ GVS A P + ++ RAD+ +Y+ K GRN+ Sbjct: 500 ADFPAVG---PVTVSIGVSLADPADNTPTTLVKRADQQLYKAKAAGRNQV 546 >UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVW7_DESBD Length = 572 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 14/245 (5%) Query: 53 QFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHF--------D 104 F ++ H+ P +DE + ++A H EL + V+ + D Sbjct: 321 DFNLFMHHIHP--DDEPAFRENFEAAQATGHEFTTELRIRTVQGEERHVSLVCGFDLLED 378 Query: 105 AFQEGLLSFTAALTDYKIYLL--TIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLY 160 L A +T+ ++ L +N D LTGLP RR E ++ + +L Sbjct: 379 GSMFRLHGAMADVTERRLAELRLERLANTDELTGLPNRRHFLECVRAEMTRSRRFGKSLC 438 Query: 161 LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDE 220 + ++DID FK VNDT+GH +GD+ LR +A + R + V R GGEEF ++ A Sbjct: 439 VAMVDIDDFKKVNDTHGHGVGDLALRHVAQTINGLRRAVDVVGRLGGEEFCVLFPEAGLA 498 Query: 221 EACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTG 280 A R+ + + + H + + +TV+ G++ +E LD ++ R+D A+YE K+TG Sbjct: 499 AGITAAERVRKALAEAVLEHGDLRLRLTVSIGLAEYSGDESLDGLLRRSDEALYEAKRTG 558 Query: 281 RNRCM 285 +NR Sbjct: 559 KNRVC 563 >UniRef50_C5BK03 Ggdef domain protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BK03_TERTT Length = 580 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 122/295 (41%), Gaps = 6/295 (2%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 ++++ ++D ++A + + + + ++ + S + I Sbjct: 282 LMQRYLDVDREFSQYLLQVNAELRSISDVLGIALEQENQVQQAAQTLSKKVGDEVEKIHA 341 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLA--IVENHWQDAHFDAFQEGLLSFTAALT 118 + + + + +H E EN A + S + + Sbjct: 342 SLAASTEIQSLKQAVTNHLDVIHKALAEFHSGHLRAENANLSDQLQALLAKVESIESESS 401 Query: 119 DYKI--YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVND 174 K R+ D LTGLP R +E + R L + + DID FK +ND Sbjct: 402 KTKELLEEERYRATHDSLTGLPNREAYNERVYQEYRRFTRYSRPLGIAVCDIDHFKKIND 461 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 +GH GD VL+ +A +++ R + V RYGGEEF+I++ + ++ +I V Sbjct: 462 NFGHQTGDRVLKLIARLISTRLRKVDFVARYGGEEFVILLPETSASQSRSVLDKIRAAVA 521 Query: 235 NHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 A + + IT++ G+S ++ ++ RAD+A+Y+ K GRNRC+ + Sbjct: 522 KAAFRFGDDPVKITLSFGISAFRSDDTIETAFQRADKALYQAKADGRNRCVVDTD 576 >UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A0L4D8_MAGSM Length = 464 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 65/280 (23%), Positives = 115/280 (41%), Gaps = 15/280 (5%) Query: 19 IDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSA 78 + + LV + + R + + L + I L + E + + Sbjct: 187 WEESRKALVDLIAEIADRMRVMRKDASGATGRLDETLSRIRTTTRLGDLES-LRGALVTE 245 Query: 79 HQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLP 138 + + + + L ++ E+ A D ++ L L K L D LT + Sbjct: 246 AEALRSQTQSLATSLSESQ---AQLDLTRKQLQQVQDDLKKAKEESL-----TDPLTQVA 297 Query: 139 GRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT 196 RR L +S + L L+++D+D FK +NDTYGH +GD VL+ +A + + Sbjct: 298 NRRALFQSLTRETARTRRYGEPLSLIIIDLDHFKKINDTYGHPVGDRVLKEVAGHARALL 357 Query: 197 RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA 256 RD +T+ RYGGEEF+ ++ +A +I V ++I+ + GV++ Sbjct: 358 RDSDTLARYGGEEFVALLPETTLPQAMEKAEQIRLSVAAMRFKLKGESLSISASLGVAQL 417 Query: 257 FPEEPL----DVVIGRADRAMYEGKQTGRNRCMFIDEQNV 292 + + RAD+A+Y K GRN + D Sbjct: 418 DDGASQDANNEAFVHRADQALYRAKSGGRNCVIQADPTPA 457 >UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7X2_9GAMM Length = 365 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 103/237 (43%), Gaps = 11/237 (4%) Query: 54 FGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGREL---MLAIVENHWQDAHFDAFQEGL 110 FG + G LD++ + + + R + + I + + + + Sbjct: 130 FGDRL--YGVLDSESKIALGYGEEDKKVFETIARMIAAKLALIEQTELVKKYMAELEAKV 187 Query: 111 LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDR 168 T L L ++ D LT L RR LDE + + L L+LLDID Sbjct: 188 EERTLEL-KRANEKLEYLASTDPLTELVNRRRLDEVLEQEFERTSRYQGELSLILLDIDH 246 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK VNDT GH +GD V+ + +R +T R+GGEEF+I+ + + A + Sbjct: 247 FKAVNDTRGHQVGDEVIAGVGNIAKQMSRKSDTAGRWGGEEFLIVAPQTSCDNAVAFAEK 306 Query: 229 ICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + ++N + + ++ + GV+ E + +V+ RAD A+Y K GRNR Sbjct: 307 LRLSIENTEFSSG---VRVSASFGVASLETGETIQLVLKRADEALYRAKHNGRNRVE 360 >UniRef50_B6BHU8 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHU8_9PROT Length = 588 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 9/249 (3%) Query: 42 EITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDA 101 E + +C F + D D + +V + H +H ++ + + Sbjct: 344 EEFKKDNECICDFFVEEEGCIKADMDGVKWVDYLVENHSKVHKIKIDIFGKVYYFSVSAS 403 Query: 102 HFDAFQEGLLSFTAALTDYKIY--LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL-- 157 + +T+ + Y L S D LTG+ RR + + ++ A+ Sbjct: 404 KVLKEKNYYSIVLTDITEQENYKKELEHLSVTDALTGIGNRRYFHQKIEEEIHRAKRYQH 463 Query: 158 NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAA 217 L L++ DID FK VND +GH +GD VL + S R+ + R GGEEFIII+ A Sbjct: 464 PLSLIMFDIDFFKHVNDKHGHSVGDEVLIEYTKLINSLLREGDVFCRIGGEEFIIILPHA 523 Query: 218 NDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGK 277 +EA + ++ ++ + I IT++ GV E ++ + R D A+Y+ K Sbjct: 524 LRDEAQKIAEKLRAKIE-----FCQKVIPITMSFGVVEYIVGEEIEFIFKRVDDALYKAK 578 Query: 278 QTGRNRCMF 286 ++GRN + Sbjct: 579 ESGRNIVVV 587 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 74/285 (25%), Positives = 110/285 (38%), Gaps = 14/285 (4%) Query: 8 IDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDND 67 + L +D L + V+ E+ + R + L Sbjct: 27 LFDTYLEAGDGLDGFKVLLNNRVDLVLC----DLEMPRMDGFRFLTMMRAREEFQDLPVI 82 Query: 68 ELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSF--TAALTDYKIYLL 125 L D+ + + + + + A L +L Sbjct: 83 ILTGREDRDTKIRGLEQGASDFVTKP----FDTGELVARVRVQLKMKGLQDELKRSNEML 138 Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDV 183 S D LT L RR L E D + + + L L++LDID FK +NDTYGH GD Sbjct: 139 RTLSITDPLTHLHNRRHLMEMVDKEFQRSSRKGAPLSLVILDIDYFKKINDTYGHQEGDR 198 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 VL LA + R Y+ RYGGEEF++++ +EA R+ V H S G Sbjct: 199 VLTILADIVRRRLRSYDLAARYGGEEFVLLLPETPVQEALSIAERLRLEVQEHVFEGSLG 258 Query: 244 HINITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCMF 286 + IT++ GV+ E +D + +AD A+Y KQ GRNR Sbjct: 259 GLVITISLGVATYPSSRVESIDSLFRQADEALYRAKQGGRNRVEL 303 >UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC96_DESAH Length = 1268 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 65/254 (25%), Positives = 106/254 (41%), Gaps = 7/254 (2%) Query: 34 VARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAI 93 + R S T S L + R + + + Y + + +H + + + Sbjct: 1017 LDRLKSIGMATQQKSVELNRIMRKLVDSLTREEVDGIYQKWVTLRFEH-RFNYKNMWRYL 1075 Query: 94 VENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRN 153 + + L +F + + L S D LTGL R +D++ ++ Sbjct: 1076 FITALLFSGILFWNRKLSAFNRQMAEA-NAKLEQLSVTDRLTGLYNRMKIDDTLLEEIGR 1134 Query: 154 AEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFI 211 L L+L+DID FK VNDT+GH GD VL +A + R + R+GGEEF+ Sbjct: 1135 VLRYNYPLSLILMDIDLFKQVNDTHGHQAGDAVLIQMAKTMDKNIRSTDICGRWGGEEFM 1194 Query: 212 IIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADR 271 +I + + A + + + H I T + GV++ + +I RADR Sbjct: 1195 VICPHTDLKGALSLAEHLRESIARQIFPH---VITQTGSFGVAQYGNGDSEADLIARADR 1251 Query: 272 AMYEGKQTGRNRCM 285 AMY K+ GRNR Sbjct: 1252 AMYLAKEGGRNRVE 1265 >UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM24_DESAH Length = 488 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 14/248 (5%) Query: 51 LCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELML------AIVENHWQDAHFD 104 + + + I PL + + ++++ G L + AI + Sbjct: 231 IAEHRQEIHAGSPLSFQYKKDNKNIYVNNRYIPEFGWYLFVEQCGDKAIAKVRNTLVLNL 290 Query: 105 AFQEGLLSFTAALTDYK----IYLLTIRSNMDVLTGLPGRRVLDESFDH---QLRNAEPL 157 F G++ +T+ LT ++ D LTG+ RR D D +++ + Sbjct: 291 VFSFGIIGLILIVTNLTIASFQKRLTKMASTDKLTGVYNRRAFDIIIDQTLKEIQR-KQT 349 Query: 158 NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAA 217 L ++L D+D FK VNDTYGHL GD +++T A R+ + + R+GGEEF+I++K Sbjct: 350 PLSIILFDLDHFKRVNDTYGHLAGDYIIQTTVGTAARTIRNSDILCRWGGEEFLILLKGC 409 Query: 218 NDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGK 277 + +A + +I V + + + I +T++ GV+ ++ + ++ RAD+A+Y K Sbjct: 410 DLGDAMKTAEKIRTAVASQPARYGDDQICVTISVGVTEHTGQDTKETLLKRADKALYLAK 469 Query: 278 QTGRNRCM 285 +G+NRC Sbjct: 470 ASGKNRCE 477 >UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5K2_HYDS0 Length = 901 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 128/295 (43%), Gaps = 17/295 (5%) Query: 1 MIKKTTEIDAILLNLNKAIDAH-YQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWID 59 + ++ ++ IL N + L ++ ++ ++ + N F ++ Sbjct: 612 LTREKKTLENILDRANFGAFIFKLKNLENLEIEIIYKNKYFDTMIKNQGIK--TFEDFLI 669 Query: 60 HLGPLDNDELPYVRLMD-------SAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLS 112 Y+R + + + + + ++L + N H L Sbjct: 670 FDDDKKELMKRYLRKITADEGGVFTINDIIMKQDKNIVLKLNMNRINQNHETLILCILQD 729 Query: 113 FTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFK 170 T K + S D LTG+ RR L++ + L A+ L +++ DID FK Sbjct: 730 ITEESMIIKYF--EELSIKDDLTGICNRRCLEDKLEEYLTLAKRYNRPLSVIMFDIDFFK 787 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 +ND+YGH IGD VL+T+A + S R + + RYGGEEF+II E+A ++ Sbjct: 788 HINDSYGHDIGDKVLKTIANIVLSNIRATDILARYGGEEFVIISPETTLEDAKALAEKLR 847 Query: 231 QLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + ++N +IT + GV+ E+ + ++ R D A+Y+ K+ GRNR + Sbjct: 848 KEIENFLFEEG---FSITCSFGVTSLNQEDTKETILKRVDEALYKAKREGRNRVV 899 >UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica RepID=A9L0C9_SHEB9 Length = 466 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 4/181 (2%) Query: 118 TDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDT 175 T L +S D LTGL RR L+ + +A+ L L++LD+D FK ND Sbjct: 278 TQRANESLYQQSVKDTLTGLFNRRYLESQLAIHIDHAKRHKEPLCLLVLDVDHFKAFNDQ 337 Query: 176 YGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 +GHL GD L T+A L R + + RYGGEEFI+++ + ++ + R+ V Sbjct: 338 HGHLAGDDCLVTVAKQLEQSLYRPADFIARYGGEEFIVVLPHTDAKDGMQIAERLRLNVS 397 Query: 235 NHAITHSEGHINITVTAGVSRAFP-EEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVI 293 I + +++T++ G + EE ++ AD A+Y+ K GRN ++ I Sbjct: 398 AEKIEYQGQLLSVTISIGCAVLRHSEETAQSLLIAADSALYQAKAAGRNCVKVAVDEPDI 457 Query: 294 N 294 Sbjct: 458 T 458 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 5/166 (3%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIG 181 + +D LTGL R E + +++ + L ++L DID FK +NDTYGH IG Sbjct: 323 KFEEMATVDKLTGLFNRHKFQEIAEIEIKRSHRHKRPLSVILFDIDHFKKINDTYGHDIG 382 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 DVVLR LA + R Y+ R+GGEEF+I+ ++++A ++ + V++H Sbjct: 383 DVVLRELAKIIKQNIRKYDYAIRWGGEEFLILTPETDEKQAFAMAEKLRKAVESHTFPEV 442 Query: 242 EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 +T++ GV+ P E +D I +AD A+Y K GRN+ Sbjct: 443 G---KVTISLGVASVDPNESIDQAIKKADNALYGSKLGGRNKTTVA 485 >UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepID=Q2W5X6_MAGSA Length = 317 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 5/178 (2%) Query: 111 LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDR 168 LS A+ K L S D LTGL RR LDESF H+L A+ + L++ D+D Sbjct: 143 LSEAYAMLALKSVELEKASITDALTGLFNRRRLDESFAHELDRAQRYAEPVSLIISDVDH 202 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK VND +GH +GD VL+ +A L R + V R+GGEEF+II + + A + Sbjct: 203 FKSVNDIHGHHVGDEVLQAMAGLLRHGVRALDVVGRWGGEEFLIICPNTDLDGATALAEK 262 Query: 229 ICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + + + + + GV++ E + RAD A+Y K GRNR + Sbjct: 263 LRAAIASAQFPGIGTS---SASFGVAQYQDGESFKDTVARADTALYRAKVNGRNRIEY 317 >UniRef50_B1KK06 7TM domain sensor diguanylate cyclase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KK06_SHEWM Length = 623 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 4/231 (1%) Query: 57 WIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAA 116 W+ L L ++ + +L + + + + + + + T Sbjct: 381 WLQWLIYLGGFIEAFLLTTIMVLRLRDMQHAKLKIELTHRQHLENYANELSQQVKLQTKQ 440 Query: 117 LTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN---LYLMLLDIDRFKLVN 173 L + K + +D+LTGL RR ES L A LYL+++DID FK +N Sbjct: 441 LLEAK-EKAETEARVDILTGLTNRRAFIESAHGFLARANRQPETHLYLLMIDIDHFKKIN 499 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 DTYGH GD L +A L+ R + V R GGEEF +++ + + A R+ + + Sbjct: 500 DTYGHSAGDAALVAVANSLSETIRTIDVVSRLGGEEFAALMENKDPQGAINLSERLRKAI 559 Query: 234 DNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + I H I +T + G+++ P + LD ++ +ADRA+Y+ K++GRN Sbjct: 560 EELVIEHEGQQIKLTTSIGIAKWGPMDNLDTLMNQADRALYQAKESGRNCV 610 >UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XLF8_MEIRU Length = 373 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 6/174 (3%) Query: 118 TDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDT 175 + ++ D LT L RR + + + +L A L+L D+D FK +NDT Sbjct: 189 LRRHYAQMHQMAHTDALTNLTNRRAMQQKLEGELDRARRYNRPFALLLADLDHFKQINDT 248 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 YGH +GD VLR +A LA R+ +++ R+GGEEF+I+ + ++A R+ + Sbjct: 249 YGHSVGDQVLREVAGRLAQHLRESDSLARWGGEEFLILAPETDLQQAYLLAQRLLGAIRE 308 Query: 236 HAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 I + +T++ GV+ + + ++ RAD AMY K GRN+ + +E Sbjct: 309 SPI----SGVQVTLSLGVACYRQGDSIAALLSRADEAMYRAKAGGRNQIVLEEE 358 >UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Y1_DECAR Length = 413 Score = 253 bits (646), Expect = 6e-66, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 2/193 (1%) Query: 101 AHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LN 158 A + L + D LTG+ RR D + +++ Sbjct: 193 ESIAAIVLMAFGIVMLANEQVTLELRAIAERDPLTGVFNRRSFLTLLDKSISHSDRMASP 252 Query: 159 LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAN 218 L +ML+D+D FK +NDT+GH GD LR R+ + + R GGEEF I++ + Sbjct: 253 LSIMLIDLDHFKKINDTWGHKSGDEALRHFVAVAVPCIRNGDIIGRVGGEEFAILLPDTD 312 Query: 219 DEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQ 278 +A R+ V + + G I +TV+ GV+ +E +V + RAD AMY K Sbjct: 313 ISKAATVAERLRCEVAARPVKNEHGSITLTVSIGVTHYRKDEAPEVTLHRADNAMYTAKD 372 Query: 279 TGRNRCMFIDEQN 291 GRN+ + N Sbjct: 373 KGRNQVEVTPDLN 385 >UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ84_DESRD Length = 550 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 73/253 (28%), Positives = 114/253 (45%), Gaps = 15/253 (5%) Query: 55 GRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGREL---MLAIVENHWQDAHFDAFQEG-L 110 GRW+ + + + + + N R++ +++ E + +A + + + Sbjct: 300 GRWLSEVYR--DQNPQVIEDIHRCFESRSNLRRQMSYTLVSTGEEKYIEASYVYVPDRHV 357 Query: 111 LSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDI 166 ++ +T + Y L S D LTGL RR + A + L L +LDI Sbjct: 358 MAMVNDITHQQQYQEHLKRLSRTDELTGLFNRRHFITLMHKEFSRARRTHERLTLAMLDI 417 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAG 226 D FK VND YGH +GD VL+ L L R Y+ RYGGEEF I + +A Sbjct: 418 DHFKDVNDKYGHDVGDHVLQHLGRILREDVRPYDIAARYGGEEFAICFPDTDLSQADHIC 477 Query: 227 VRICQLVDNHAITHSEGHINITVTAGVSRAFP-EEPLDVVIGRADRAMYEGKQTGRNR-- 283 R+ L ++ + G I TV+ G+S P E LD ++ AD A+Y K GRNR Sbjct: 478 ERLRTLCAASEVSRNGGTIGFTVSFGLSELRPEHEDLDGLLKSADNALYAAKANGRNRIE 537 Query: 284 --CMFIDEQNVIN 294 ++ D+Q + Sbjct: 538 HDVVYCDQQTGCS 550 >UniRef50_B9Z1A1 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1A1_9NEIS Length = 593 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 76/295 (25%), Positives = 127/295 (43%), Gaps = 24/295 (8%) Query: 3 KKTTEIDAILLN-------LNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFG 55 ++ +++ L L ++D L ++ V+R AS + TD + Sbjct: 300 QQIYQLETSLKEVIRKQGALKNSLDEAASSLRNLLDRFVSRLASMTDSTDEFHSKISTHS 359 Query: 56 RWIDHLGPLDNDELPYVRLMDSAHQHMHNCGR---ELMLAIVENHWQDAHFDAFQEGLLS 112 + + ++ LM+ N R EL+ + + + + L + Sbjct: 360 TRLRQIQNVEELTPIISSLMEDTSTMQLNLVRSRDELLSSREQVESAEQRIKELEIALEA 419 Query: 113 FTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFK 170 +A + + D LTG RR L E F ++ AE L + L+D+D FK Sbjct: 420 ASAKVKE------------DQLTGAYNRRGLAEHFQREISRAERTNSPLSVALIDVDNFK 467 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 +ND YGHL GD L+ L R + V R+GGEEF+I++ EA +A R+ Sbjct: 468 QLNDHYGHLTGDDALKHLVNVTRHTMRPSDIVARFGGEEFVILLPDTPPPEAIQAIQRLQ 527 Query: 231 QLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + + + + IT +AGV++ E VI RAD+AMY+ K +G+NR Sbjct: 528 RELTKTFFLANNDRLLITFSAGVAKWHLGERDTDVIERADQAMYQAKISGKNRVC 582 >UniRef50_C6P3V9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3V9_9PROT Length = 456 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 117/289 (40%), Gaps = 5/289 (1%) Query: 4 KTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGP 63 ++ + A+ N+ + L ++ E T +FG W+ H Sbjct: 169 ESYRMFALGQNMLAERERQRAALSEWAQHILLHLLGD-EGTGVPEMKHSEFGLWLQHKAS 227 Query: 64 LDNDELPYVRLMDSAHQHMHNCGR-ELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKI 122 + + P + + + + L+ + + LT Sbjct: 228 IIFHDAPELERIRVCVEKLERTLLPGLIEKRRNGGNAREAMRQVEADIGEVKFLLTGLFD 287 Query: 123 YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLI 180 + + S D LT L RR L +L A ++LLDID FK +NDT+GH Sbjct: 288 RFIEVESGRDSLTRLLNRRYLPTILMRELALARNSDVPFAILLLDIDHFKNINDTHGHDS 347 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD+VL+ + + S R + ++RYGGEE ++++ ++A + I + + Sbjct: 348 GDMVLQQASDLVTSSVRVGDFIFRYGGEELLVVLVEIGRDQALQVAETIRERFAAEPMRV 407 Query: 241 SEGHI-NITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 +G + +TV+ GV+ + ++ AD A+Y K +GRNRC D Sbjct: 408 GDGKVMQVTVSIGVAAYNGHPDYERIVKDADDALYRAKNSGRNRCELAD 456 >UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDS7_9PROT Length = 750 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 109/271 (40%), Gaps = 8/271 (2%) Query: 21 AHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQ 80 A+Y ++++ + ++ + + D + +++ + Sbjct: 484 AYYISVLNLDNVKISGTTPFKYNASFMIRDDYSILKNMIDRVLEDIPHIKKEKILSNYIN 543 Query: 81 HMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKI--YLLTIRSNMDVLTGLP 138 + G V W +L L+ K L + D LT + Sbjct: 544 VNYQQGYTEKYIKVTYFWFGIVIIILLGIILIIIYQLSKIKKLSKQLETMAFYDKLTNIY 603 Query: 139 GRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT 196 R + ++ L L+ LDID FK +ND +GH GD+VL+ + Sbjct: 604 NRAKFKNILKEFIEYSKRYKTPLSLIFLDIDYFKKINDNFGHEKGDLVLKEMVKVAKLSL 663 Query: 197 RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA 256 R+ + R+GGEEF+I++ + A +I +++H I +TV+ GV++ Sbjct: 664 RESDVFGRWGGEEFLILLPNTDINGAKIVAEKIRDAIESHDF----DGIKVTVSLGVTQL 719 Query: 257 FPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 ++ ++ + RAD A+Y+ K+ GRNR + Sbjct: 720 KEDDTIESFVNRADIALYQAKKEGRNRVVVF 750 >UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VK28_9CYAN Length = 331 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 8/206 (3%) Query: 87 RELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDES 146 R+ + ++ HW A E A + L ++D LT + RR D++ Sbjct: 121 RQRVRRLLHTHWVMAELHRKIEQ-ERVLKAKLEEMNQELQRLVDLDGLTQIANRRAFDQA 179 Query: 147 FDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVY 203 + + E L L+L DID FK NDTYGH GD L+ +A L R + V Sbjct: 180 LQQEWKRLAREQAPLSLILCDIDFFKAYNDTYGHQAGDECLKQVADILRKAAKRPADVVA 239 Query: 204 RYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN--ITVTAGVSRA--FPE 259 RYGGEEF++I+ + A + I + + AI H ++ +T++ GV+ P+ Sbjct: 240 RYGGEEFVVILPNTSLRGAMQVAESIRSKLKSRAIVHEGSGVSKFVTLSCGVAGVIPPPK 299 Query: 260 EPLDVVIGRADRAMYEGKQTGRNRCM 285 D +I AD+A+Y+ K GR+R + Sbjct: 300 TTPDRLIAEADQALYKAKVEGRDRVV 325 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 3/180 (1%) Query: 120 YKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYG 177 L + D +TG+ RR D + A L +++DID FK +ND +G Sbjct: 156 RNAEELERLATTDGMTGIFNRRHFLTLADREWARARRYGRPLSCLMIDIDHFKSINDDFG 215 Query: 178 HLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHA 237 H +GD ++ LA RD + + R GGEEF +++ + +A R+ V + Sbjct: 216 HQVGDDMIVHLAKLARDCKRDCDVLARIGGEEFALLLPETDLPQALAVAERLRGEVAASS 275 Query: 238 ITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV 296 + + G + TV+ G + + + + ++ ADRA+YE K GRNR + + + V Sbjct: 276 LLMASGSVRATVSIGAATSAATIDGISDLMRAADRALYEAKHGGRNRVVCHVSPDAVPSV 335 >UniRef50_B9Z5H6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z5H6_9NEIS Length = 650 Score = 252 bits (645), Expect = 8e-66, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 4/209 (1%) Query: 90 MLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDH 149 + I E + E L + + L D LTG+ RR LD++ Sbjct: 436 INDISERKRLEHSLKTANEALRQHLNEIESLQSGLKEQL-VRDPLTGVFNRRYLDDALPR 494 Query: 150 QLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGG 207 L + A + L++LD D FK +NDTYGH GD VL TL L R + V RYGG Sbjct: 495 VLAHTLALGKPVALLMLDADHFKRINDTYGHKAGDCVLSTLGARLRDSLRSNDMVCRYGG 554 Query: 208 EEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAF-PEEPLDVVI 266 EEF+I++ + E A ++ ++V I + +N+TV+ GV+ + E + ++ Sbjct: 555 EEFLIVLPGMSLEHAIAKAEQLRKVVQQWPIEALDHTLNVTVSIGVACSPLHAEDAESLV 614 Query: 267 GRADRAMYEGKQTGRNRCMFIDEQNVINR 295 AD A+Y K +GR+R + ++ Sbjct: 615 HAADTALYVAKSSGRDRLCVAEPPAGVSP 643 >UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0X5_DESAD Length = 779 Score = 252 bits (645), Expect = 8e-66, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 5/180 (2%) Query: 110 LLSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLD 165 ++ +T+ K L + D LTGL RR ES + L L L+++D Sbjct: 588 VVGTFRDVTERKEAEDKLRKLATTDSLTGLSNRRFFMESAEDALERTRRYGRDLSLLMMD 647 Query: 166 IDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRA 225 ID FK VND YGH GD VL+ L+ R+ + R GGEEF I++ + A Sbjct: 648 IDYFKTVNDMYGHDAGDDVLKGLSKTGLKILRNIDVFGRIGGEEFSILLPDTGLDGATLV 707 Query: 226 GVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRC 284 R+ ++ + G +NITV+ GV+ L+ ++ AD +Y K+ GRN+ Sbjct: 708 AERLRAEIETTKMNTRSGSLNITVSIGVATYSEHTKTLEQLLKAADIGLYAAKEAGRNQV 767 >UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8J1_ALHEH Length = 689 Score = 252 bits (645), Expect = 9e-66, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 98/235 (41%), Gaps = 6/235 (2%) Query: 56 RWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTA 115 W + R++ V + + ++ + A Sbjct: 459 LWGAEKVAAPLTPRHSFAAWREEVRGHSAPWRDIEREAVLDLADEVAVLLSRKEIDLLNA 518 Query: 116 ALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVN 173 LT+ L ++ D LTG+ R + E + + E L+L DID FK VN Sbjct: 519 QLTEA-NRRLKRQATTDSLTGVWNRYRMQEQIELERGAHERYGTPCSLLLFDIDHFKAVN 577 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 D YGH GD VL LA + R + + R+GGEEFI++ + EEA R+ Q + Sbjct: 578 DQYGHEAGDQVLVALARAVVGELRATDFLGRWGGEEFIVLATNSAPEEAWTLAERLRQCI 637 Query: 234 DNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 G +T++ GV+ + +D +I RADRAMY KQ GRNR + Sbjct: 638 AGLRFP---GVGPVTISVGVASLSRGDTVDRLIDRADRAMYRAKQRGRNRVEQAE 689 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 252 bits (645), Expect = 9e-66, Method: Composition-based stats. Identities = 65/269 (24%), Positives = 96/269 (35%), Gaps = 9/269 (3%) Query: 28 SMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELP--YVRLMDSAHQHMHNC 85 E + LC + N LP + Sbjct: 1030 QYVKYYHQGRVKAIEDIEQAEIALCH-RELLKRYQVKANLVLPVVAFDQLWGLLIAHDCH 1088 Query: 86 GRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDE 145 L A L S +D LT + R D Sbjct: 1089 QPRKWLDHEITLLSQITITAAIAIHQGELHQQLQNANLELKKLSAIDGLTQVANRHRFDV 1148 Query: 146 SFDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETV 202 + + R +L L+L D+D FK NDTYGHL GD L+ +A + + R + V Sbjct: 1149 YLEQEWRRLMRSRHSLSLILSDVDHFKWYNDTYGHLAGDHCLQQIARVIKTSVGRPADLV 1208 Query: 203 YRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN-ITVTAGVSRAFPEE- 260 RYGGEEF I++ + + A +I Q V N I H++ +T++ GV+ P Sbjct: 1209 ARYGGEEFAIVLPETSLKGALFVAEQIRQKVKNLTIPHTKSAYQCVTLSLGVASLIPSGA 1268 Query: 261 -PLDVVIGRADRAMYEGKQTGRNRCMFID 288 +I AD A+Y+ K GR+R + I Sbjct: 1269 LSPKALINAADEALYQAKANGRDRVVSIP 1297 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 87/189 (46%), Gaps = 9/189 (4%) Query: 109 GLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDI 166 GL + +L+ +++ D +T LP + + L +A + L ++++D+ Sbjct: 408 GLHLYMILTQQRLTHLIHHQASYDPITQLPNWIIFNHRLALALVDATHGSNMLGVLIIDL 467 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYET----VYRYGGEEFIIIVKA-ANDEE 221 ++FK +ND+ GH +GD +L+ + L + Y + R+ G FI+++ A +E Sbjct: 468 NQFKRINDSLGHGVGDYLLQKASDRLQNCLESYSFLEPLLARWHGAGFIVLLSQLAYVDE 527 Query: 222 ACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTG 280 A ++ I + V+ G++ A + + +V++ A+ AMY+ KQ G Sbjct: 528 AINFSQKLLNDFQE-PFYVQSQAIYLGVSIGIALAPYDGDSSEVLLKNAESAMYQAKQQG 586 Query: 281 RNRCMFIDE 289 +N Sbjct: 587 KNTYQLYRP 595 >UniRef50_C4XH70 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XH70_DESMR Length = 570 Score = 252 bits (645), Expect = 9e-66, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 117/276 (42%), Gaps = 21/276 (7%) Query: 23 YQWLVSMF-HSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQH 81 W+ + +V R N G FG ID G + L R + + Sbjct: 311 IFWVARLLHRAVTNRIVELTRYAGNVRDG--HFGGAIDMAGSDEIGLL--ARALADMNGR 366 Query: 82 MHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRR 141 +H+ L + + + L D K L + S D LTGL RR Sbjct: 367 IHDLVGGLEDKVRQRTLE-----------LDAKNRELDAKNQALAVLSLTDRLTGLCNRR 415 Query: 142 VLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDY 199 LD+ + R A ++++D+D FK VNDT+GH +GD VL +A L + R+ Sbjct: 416 RLDQVLSGEWRRAHRYGTPFSVIMIDLDNFKDVNDTFGHAVGDAVLLRVADILLAVVRET 475 Query: 200 ETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE 259 + V R+GGEEF+++ E+A + + + + IT + G++ + Sbjct: 476 DVVGRFGGEEFLLVCPETTVEDARVLAEALRRELQDTDFPIVG---RITASFGLADYEAD 532 Query: 260 EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINR 295 ++ RAD+A+Y KQ+GRN+ + ++R Sbjct: 533 PGPAALVARADKALYRAKQSGRNQVIVAPTTAAVSR 568 >UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SB7_SULDN Length = 487 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 5/199 (2%) Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFD 148 L I E+ + + E ++ L ++ D LT + RR++DE Sbjct: 290 LHQEINESKAKLEELNKNLENMVKEKTKSLMEANQKLNNLASKDSLTNIFNRRIIDEFIS 349 Query: 149 HQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 + ++ +L L+++DID FK VND YGH +GD V+ +L ++ R+ + R+G Sbjct: 350 KETIKSKRYNNSLALIMIDIDHFKEVNDKYGHQVGDEVILSLVDIISKNIRESDIFGRWG 409 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVI 266 GEEFII++ N +A I + V + T++ GVS + V I Sbjct: 410 GEEFIILLPETNLNQATIVAQNIRKKVQEYRFDKVGQK---TISLGVSEFNSNDDSTVFI 466 Query: 267 GRADRAMYEGKQTGRNRCM 285 R D A+Y+ K TGRNR + Sbjct: 467 KRVDDALYKAKATGRNRVV 485 >UniRef50_C8X2T0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X2T0_DESRD Length = 315 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 103/243 (42%), Gaps = 5/243 (2%) Query: 46 NHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDA 105 N + L F + ++ + +D+ H +M L + Sbjct: 69 NSVFKLGHFSFFAQNVHS-YIFPFKSEKYLDTNHDYMQQSVSLAPLRDDQGRVSHVCVQV 127 Query: 106 FQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLML 163 E + L + +D LTGL RR L ES +L + + + Sbjct: 128 ADETDTVLARERMEEARCQLEEMTRLDPLTGLANRRHLMESLSRELSRCGRSGSQVTVAI 187 Query: 164 LDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEAC 223 LD+D FK+VNDTYGHL GD VL A L S R Y+ V RYGGEEF +I+ + + Sbjct: 188 LDLDHFKVVNDTYGHLCGDQVLIHTAKRLESMLRQYDLVGRYGGEEFCVILPETSLKSGF 247 Query: 224 RAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQTGR 281 R+ + V + + + I +TV+AG + E D ++ AD+ +Y+ K GR Sbjct: 248 EIVERLRKAVAATPVPYEDLEIPLTVSAGCACTEDMECLSTDALLLSADQYLYKAKDAGR 307 Query: 282 NRC 284 + Sbjct: 308 DCV 310 >UniRef50_C0QHN1 Putative diguanylate cyclase (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHN1_DESAH Length = 354 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 72/298 (24%), Positives = 126/298 (42%), Gaps = 19/298 (6%) Query: 6 TEIDAILLNLNKAIDAHYQWL--VSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGP 63 + A ++ ++ ID WL S+ + + +ITDN + ++H Sbjct: 62 YRLFAFVIRTDRGID---VWLDPRMYKKSLESVIINDFDITDNSNINY------LNHTFH 112 Query: 64 LDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKI- 122 D+ E +++ + R + + + H + L S A++ Sbjct: 113 PDDKESECSLKNLTSYDLIEENCRAKIYMLPNQTLLNYHDEIVNIILKSTGIAISRQMNI 172 Query: 123 YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLI 180 LT +++D LTG RR + +A L + + DID FK VNDT+GH Sbjct: 173 ARLTDAASLDPLTGCYNRREFQNQIQRSVSDATRHKKPLSIFMFDIDHFKRVNDTHGHPA 232 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VL+ ++ +A R +T+ RYGGEEFI I+ +A R+ + + I Sbjct: 233 GDEVLKEISRLVADNIRRGDTLARYGGEEFIAILPETAKHKAIELADRLRLKIQSKEIKT 292 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM-----FIDEQNVI 293 G+I +T + G++ P ++ AD +Y+ K +GRNR M + + Sbjct: 293 DSGNIKVTASFGIAELHPHADSSRLVKDADEMLYKSKLSGRNRVMPGLIKIAPPKKAV 350 >UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQN9_VIBSL Length = 405 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 3/177 (1%) Query: 117 LTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVND 174 L + L S D LT L RR ++E + + L +++LDID FK VND Sbjct: 213 LNARLMQSLYSSSMKDSLTQLYNRRAMNEMLRREWMRSVRHNHPLSVIILDIDHFKQVND 272 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 +GH GD VL+ + L R + +RYGGEEF+I++ EAC+ ++ +++ Sbjct: 273 QHGHQTGDQVLKKIGIILQHNLRAADIPFRYGGEEFLIVLPDTRIGEACKVAEKLRIIIE 332 Query: 235 NHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 + N+T + G+S + E+ + +I RAD A+Y K+ GRN + ++ Sbjct: 333 ETKF-WRQQSANLTASFGLSELWAEDKVPSMIKRADEALYYAKENGRNTVCALTDEQ 388 >UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece RepID=B1WQB8_CYAA5 Length = 493 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 11/222 (4%) Query: 73 RLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMD 132 + M+ + + I E ++ + T L + L N+D Sbjct: 272 DEVGKLATSMNQLIQWIDEHITELKEAR---QTLEKRVEQRTIELQQA-LKKLKALVNLD 327 Query: 133 VLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLAT 190 LT + RR DE + + + L+L D+D FK+ N+TYGHL GD L+ +A Sbjct: 328 GLTQIFNRRYFDEVLYREWQRGRREKSVISLILCDVDYFKIYNETYGHLGGDSCLQEVAQ 387 Query: 191 YLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI--NI 247 + R + V RYGGEEF+I++ + A I ++ I H + ++ Sbjct: 388 GIRRQVKRPSDLVARYGGEEFVILLPNTDLNGALALAEMIRNAIEAMNIPHENSLVSDHV 447 Query: 248 TVTAGVSRAFPEEP--LDVVIGRADRAMYEGKQTGRNRCMFI 287 T++ GV+ P+E + +I AD A+Y+ K+ GRN + Sbjct: 448 TISMGVTSKIPQETDEYEHLIEEADDALYQAKENGRNCVCYF 489 >UniRef50_Q0F205 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F205_9PROT Length = 592 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 109/281 (38%), Gaps = 16/281 (5%) Query: 13 LNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYV 72 L+ + W ++M +++ A P F + Sbjct: 325 LDARFYVAGWSVWSLAMLIAMLRNTAVIPSDFAT------SFAPALGFFIEGVLLSFALA 378 Query: 73 RLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMD 132 ++ ++ + + + +L TAAL + + + D Sbjct: 379 DRINRLMNEKETM------ELMHIEHLEQEQETLERVVLERTAAL-EQAMRDTEHLARTD 431 Query: 133 VLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLAT 190 LTG RR ES + + A L ++++D+D FK +ND YGH GD VL + Sbjct: 432 ALTGALNRRACFESGETEFDRARRYNTPLAVVMIDLDLFKSINDNYGHATGDAVLVAVVE 491 Query: 191 YLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVT 250 L TR +T+ R GGEEFI+++ + ++A R + +T + I +T + Sbjct: 492 TLRGMTRTVDTIGRIGGEEFIVLLPQTSLQDAAALTERYRGAIGQLEVTLDDLAIKVTAS 551 Query: 251 AGVSRAF-PEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 GV+ E L IGRAD A+Y K GRN + Sbjct: 552 FGVACVDVTGETLTQAIGRADAALYRAKSRGRNCIELAEGP 592 >UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TWE2_ACIAC Length = 377 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 4/227 (1%) Query: 68 ELPYVRLMDSAHQHMHNCGRELMLAI-VENHWQDAHFDAFQEGLLSFTAALTDYKIYLLT 126 + P +D+A + L L + ++ A L L Sbjct: 150 DRPLHPDIDTATSLLCILALTLFLTVFAHTSYRRAMEQQKSNDRLREQFEEIRALQDQLQ 209 Query: 127 IRSNMDVLTGLPGRRVLDESFDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 ++ D LTGL RR LD + ++ A+ L L LM++DID FK +NDT+GH GD + Sbjct: 210 EQAVRDPLTGLYNRRHLDATLASEIARCGAQGLPLSLMMIDIDHFKRINDTHGHAAGDAM 269 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 L+ LA L R + R GGEEF++++ A + + + + H Sbjct: 270 LQALAQLLQRHVRVRDLACRLGGEEFVLLLPETPLAVARERAEALREAFEALQVRHDPEV 329 Query: 245 INITVTAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 ++ T++ GV+ + AD A+Y K GRNR + DE Sbjct: 330 LSATLSCGVAAFPQHARQPLALTASADEALYAAKMQGRNRVVVQDEP 376 >UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID=Q30QX5_SULDN Length = 564 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 70/308 (22%), Positives = 129/308 (41%), Gaps = 27/308 (8%) Query: 8 IDAILLNLNKAIDAH-------YQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 I I + I+ H + L + + ++ +++ ++ + +Y L F Sbjct: 255 IQTIFKTKEQYINEHKLLNSIIFVSLANFIYGLIDFNSALEIMSSSLTYALIVFMWISIR 314 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAA---- 116 + + + + + + L I + ++ +H + + + + Sbjct: 315 ICKKGDKLIKIFLIAHTLYLIFSVYALLYYLGIADANYISSHGTSIGLIIEAMLLSYLVS 374 Query: 117 -----------LTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDH--QLRNAEPLNLYLML 163 K L + ++ D +T L RR E L E NL +++ Sbjct: 375 YKFIIMEQEKEEEKLKQIELKLLASTDSMTKLYNRRYFTEISAKVLHLSKREKNNLSILM 434 Query: 164 LDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEAC 223 +DIDRFK+VNDTYGH GD VL L+ L R + V RYGGEEF+I++ + ++A Sbjct: 435 IDIDRFKVVNDTYGHQFGDEVLIALSRLLVEHQRKSDIVCRYGGEEFVILLPNTSLKDAT 494 Query: 224 RAGVRICQLVDNHAITHS-EGHINITVTAGVSRAF--PEEPLDVVIGRADRAMYEGKQTG 280 +I LV++ + T++ GV++ E+ + + RAD A+Y K +G Sbjct: 495 NIAQKIRILVESLTMEAPTNKEFKFTISIGVAQIDVEHEDDIKFALKRADDALYRAKNSG 554 Query: 281 RNRCMFID 288 RNR + Sbjct: 555 RNRVCAEE 562 >UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNC9_9BACT Length = 494 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 103/187 (55%), Gaps = 7/187 (3%) Query: 104 DAFQEGLLSFTAALTDYKIY--LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NL 159 +A ++ +L + + + Y L +N D LTGL RR +D+ + + +L Sbjct: 310 EALKDMILVLKDKMENIQSYSDRLEYLANRDSLTGLWNRRKMDQILLSETERSSRYGSSL 369 Query: 160 YLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAND 219 ++++DID FK VND +GH +GD VL ++A + + TR ++V R+GGEEF++++ + Sbjct: 370 SVVMVDIDHFKNVNDNFGHEVGDTVLSSIAALMKNCTRAGDSVGRWGGEEFLVVLPETDV 429 Query: 220 EEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQT 279 + A R+ V+++ I IT + GV++ EP++ + RAD A+Y+ K+ Sbjct: 430 KGALEYAERMRSAVEDNVFHDD---IRITSSFGVTQYRSGEPVNEFVARADEALYDAKEK 486 Query: 280 GRNRCMF 286 GRNR Sbjct: 487 GRNRVEI 493 >UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZV8_CHRVO Length = 383 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 15/265 (5%) Query: 28 SMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGR 87 ++V D + + + + FG P+ + + + + + ++ + + Sbjct: 127 HWKRTIVVDDIQTSPLWAHALHKVQPFGLRACWSMPIFSSDRQLLGTLATYYREPRSPSQ 186 Query: 88 ELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESF 147 E + +++ D L + D LT L RR E Sbjct: 187 E-----------ELALAQRITRIIAIALQ-RDGHEKQLYRLATQDGLTELNNRRQFIELA 234 Query: 148 DHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRY 205 D ++ + + ++++D+D FK +ND YGH +GD V+R + R + R Sbjct: 235 DREIERSRRHGSRMSVLMMDLDHFKDINDHYGHAVGDEVIRHFSQVCREVLRASDLCGRL 294 Query: 206 GGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEP-LDV 264 GGEEF ++ ++A + R+ L + ++ G + TV+ GV+ +E +D Sbjct: 295 GGEEFAAVLPDTGLDDARQVAERLRSLASSARLSAVSGSLGYTVSIGVAERHADETDIDE 354 Query: 265 VIGRADRAMYEGKQTGRNRCMFIDE 289 V+GRAD+ +Y+ K+ GRNR Sbjct: 355 VLGRADKQLYQAKRDGRNRVSGAAP 379 >UniRef50_A1AK83 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AK83_PELPD Length = 304 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 11/237 (4%) Query: 55 GRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFT 114 G + L +D + ++ + + V LL+ Sbjct: 77 GEIRHSDRNVQILLLTAFEDVDYLKRSINIGVDKYVTKPVNGFQLHETLLECAHSLLA-- 134 Query: 115 AALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLV 172 L + D LTG+ R F+ + AE L +++ DID FK V Sbjct: 135 -------EEALQCAARTDHLTGIANRWEFINRFNTEKGRAERHGTPLSIIIADIDHFKSV 187 Query: 173 NDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQL 232 NDT+GH GD VLR++A ++S R + R+GGEEF++++ N + A R ++ Q Sbjct: 188 NDTFGHNAGDRVLRSVANAISSSIRVEDACGRWGGEEFMLLLPDTNLDAAARVAEKLRQA 247 Query: 233 VDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 V +I I +T++ GV + P LD I D A+Y K GRNR Sbjct: 248 VSELSIPWEGESIAVTLSMGVGQFRPGMTLDECIQPVDHALYRAKTGGRNRVELAAP 304 >UniRef50_Q1ZGY5 GGDEF domain protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGY5_9GAMM Length = 493 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 19/263 (7%) Query: 32 SVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELML 91 SV + K + ++S L Q + L N+ Y++ MD +ML Sbjct: 232 SVFNKKNQKLKDLQDNSSALYQKTENATDINTLKNEIFTYIKSMD------------VML 279 Query: 92 AIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL-----LTIRSNMDVLTGLPGRRVLDES 146 E+ +D + FQ+ + ++ + Y + +++D LT +P R E Sbjct: 280 KEQESKHEDDMQEKFQDMIRQIKELKSETQNYQKTLKQQSELAHLDFLTKIPNREAWSER 339 Query: 147 FDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYR 204 + + L + ++D+D FK +ND +GHL GD V+ +A L R+ + + R Sbjct: 340 LTFEFSRYQRYQNPLKIAIIDMDHFKRINDQFGHLAGDKVINVVAQTLKKSLRNTDFIAR 399 Query: 205 YGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDV 264 YGGEEF I++ +E+A ++C + + + +I+IT++ G + + +D Sbjct: 400 YGGEEFAILLPEITNEQAVDVLQKLCAKIASIPFKFKKDNISITISIGCASFDKGDNIDS 459 Query: 265 VIGRADRAMYEGKQTGRNRCMFI 287 RAD A+Y+ K GRN+ +F Sbjct: 460 AFERADNALYKAKNGGRNQVVFF 482 >UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA9_METML Length = 548 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 109/203 (53%), Gaps = 8/203 (3%) Query: 93 IVENHWQDAHFDAFQE--GLLSFTAALTDYKIYLLT--IRSNMDVLTGLPGRRVLDESFD 148 + + ++ A F+A + ++ A + K+ L ++++D LT L R E + Sbjct: 345 WMNSVFKIAEFNALHQPIRMIGVHANIHSRKLLELELNQKAHIDYLTELNNRGHFMEQAE 404 Query: 149 HQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 +L ++ ++ + ++DID FK +ND++GH IGD+VL+ LA R+ + + R G Sbjct: 405 KELSRSQRYQKDMAMFMMDIDFFKKINDSHGHKIGDIVLKKLADVCRQTLREVDIIGRIG 464 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG-HINITVTAGVSRA-FPEEPLDV 264 GEEF I++ N EA R+ V + + +G + TV+ GVS ++ +D+ Sbjct: 465 GEEFAILLPETNRAEALEVAERLRLAVADSKVPMKDGLPVQYTVSIGVSSVASADDNIDM 524 Query: 265 VIGRADRAMYEGKQTGRNRCMFI 287 ++ RAD+A+Y+ KQ+GRNR Sbjct: 525 LLSRADQALYQAKQSGRNRVCAA 547 >UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXG9_HALOH Length = 499 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 10/286 (3%) Query: 9 DAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDE 68 D I + A + + + + G F + + PLDN E Sbjct: 217 DDIYTRKQNTLIASLDMSKEIVLDLSSGIYKELSRKKKVIAGKVSFDDDLSKIIPLDNIE 276 Query: 69 LPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLL-----SFTAALTDYKIY 123 + ++ + G+EL+ +I H Q L F+ AL + +Y Sbjct: 277 EG--KEIEYIIVPV-TRGKELIGSINIFSMDKGHLPILQHSFLESFANQFSVALQNALLY 333 Query: 124 L-LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGD 182 +N D LTGL L+ L L+++DID FK VND +GHL+GD Sbjct: 334 KKQEEMANRDGLTGLYNHAYFQNRLHLLLKQENKHPLTLIIMDIDNFKQVNDRFGHLVGD 393 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 VL+ LA L R+ + + RYGGEEF II+ ++ R+ +L+ ++ I Sbjct: 394 KVLKELAHLLKHNLREGDLIARYGGEEFAIILPETELKQGEFIAKRLRKLISDNEIVLDN 453 Query: 243 G-HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 + ITV+ GV++ + + I +AD+A+Y+ K+ G+NR Sbjct: 454 NRSLYITVSIGVAQYNKKWSQEEFIDKADQALYKAKEAGKNRVTLA 499 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 7/225 (3%) Query: 69 LPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY--KIYLLT 126 L R + + + E L H+ F + A +T+ L Sbjct: 271 LDLYRRVAAGELGPQSLEHERRLESKTKHYDLRVFRTGPGTISVEFADITERTRMQEELR 330 Query: 127 IRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVV 184 S D LT L RR L + +L L LMLLDID FK +NDT+GH GD+V Sbjct: 331 EASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLLDIDHFKRINDTFGHDSGDLV 390 Query: 185 LRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH 244 L +A +++ R + + RYGGEEF+I + + A +I + + Sbjct: 391 LTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAVLAEKIRSSIAMFSFPTVG-- 448 Query: 245 INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 +T++ G+S ++ ++ +I RAD A+Y K+ GRNR + E Sbjct: 449 -AVTISVGISLLESKDDINALIKRADTALYAAKEMGRNRVVRSTE 492 >UniRef50_D2L2K3 Diguanylate cyclase with GAF sensor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2K3_9DELT Length = 499 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 56/168 (33%), Positives = 89/168 (52%), Gaps = 4/168 (2%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIG 181 + +R++ D LT + RR DE +LR + + L++LDID FK +NDTYGHL+G Sbjct: 314 QVKVRADHDGLTRIHNRRAFDERLVEELRRHQRYHHPMSLLMLDIDHFKGINDTYGHLVG 373 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D VLR + + R + RYGGEEF+II+ +E++ R+ L+ + H Sbjct: 374 DHVLREVGRLMTETLRSTDFTARYGGEEFVIILPQTAEEQSRVLAERLRGLIADARFVHD 433 Query: 242 EGHINITVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQTGRNRCMFI 287 +ITV+ G + P ++ +AD+A+Y+ K GRN+ Sbjct: 434 GHPFSITVSIGAATLLPGALSKRKDLLDKADKALYQAKTLGRNQVCTA 481 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 67/284 (23%), Positives = 117/284 (41%), Gaps = 5/284 (1%) Query: 11 ILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELP 70 +L ++A W R + + + + D LP Sbjct: 967 MLGESEHYVEAVATWGEDFVIPTFFRLDECWALRRGCVHWIEAKSPNLFCQHISQGDFLP 1026 Query: 71 YVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL-LTIRS 129 L + G + + A + + AL + K+ +S Sbjct: 1027 AESLCVPMMAQGNTLGLLYIATLTPGQLTPAKRQLARTVVEHLAIALANVKLQEKFKAQS 1086 Query: 130 NMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LTGL RR L+ES + ++ A ++ ++++DID FK ND +GH GD VL+T Sbjct: 1087 MRDALTGLFNRRYLEESLEQEIHRARRNHYSVGIVMIDIDHFKRFNDQFGHDAGDEVLKT 1146 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI-N 246 +A L R + RYGGEE +I+ A+ + +I ++++ + + + + Sbjct: 1147 VARLLQGSIRSSDIACRYGGEELTLILPEASLSDTQARSEQIRYMIEHLQLHYENQSLGS 1206 Query: 247 ITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 IT + GV+ E L+ V+ AD A+Y+ K GRNR + + Sbjct: 1207 ITASFGVACFPEHGETLEAVLRIADTALYQAKALGRNRVVCATD 1250 >UniRef50_B6BJC3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJC3_9PROT Length = 598 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 9/240 (3%) Query: 48 SYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQ 107 ++ + + L + + + ++ H G + + + ++ + Sbjct: 362 NHNIVRHKEIPQTLYKELWETIKAGNVWQGEIKNRHKNGSSYWVDVSISPVKNEKDEII- 420 Query: 108 EGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLD 165 + +TD K + S D LT L R LDE F +L A N ++++D Sbjct: 421 -SYTAIRHDITDKK--RIEELSITDRLTQLYNRLKLDEIFAMKLATAGRYNTNFSVIIID 477 Query: 166 IDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRA 225 ID FKLVNDT+GH GD VLR A + + R+ + V R+GGEEF+I+ + + A + Sbjct: 478 IDYFKLVNDTWGHQAGDDVLREFAEIIKNNARETDIVGRWGGEEFLILSSDTDLDGAIKL 537 Query: 226 GVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 ++ ++V + + T + GVS P + ++ RAD A+Y K+ GRNR Sbjct: 538 SEKLREMVSLFNFSFAGYK---TASFGVSSYHPGDDEKTMVKRADEALYRAKENGRNRVE 594 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 10/240 (4%) Query: 59 DHLGPLDNDELPYVRLMDS-----AHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSF 113 H L +P + + G + DA + Sbjct: 1374 HHQSGLRCQHIPADEAIATTLCIPMIAQGETLGLFYLSTNNSTALPDAKLQIARTVAEQV 1433 Query: 114 TAALTDYKIYL-LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFK 170 A+ + + L +S D LTGL RR L+E ++ + + ++++D+D FK Sbjct: 1434 ALAIANLNLRETLQYQSIRDPLTGLYNRRYLEEVLTQEIARGQRRQHPISVVMIDVDYFK 1493 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 NDTYGH +GD VL+T+ L R + RYGGEE +I+ ++ EE I Sbjct: 1494 RFNDTYGHDVGDYVLQTIGAMLKETVRGSDIACRYGGEEMTLILPESSLEETTIKAEEIR 1553 Query: 231 QLVDNHAITHSEGHI-NITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + + + ++ H+ +T++ G++ +I AD A+Y K GRN+ + Sbjct: 1554 EAIAQLTLAYNGQHLGKLTISLGIAGFPKHGTTGIALIQAADAALYRAKAAGRNQVVVAP 1613 >UniRef50_C1D915 GGDEF domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D915_LARHH Length = 879 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 7/182 (3%) Query: 113 FTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN----LYLMLLDI 166 + +++ K + L +++ D LTGL RR + +L +++LDI Sbjct: 687 YLNDISERKAHEDDLVKQASTDGLTGLANRRSWLVHANRELTRCRRYPDEADCAVVMLDI 746 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAG 226 D FK VND++GH +GD VL+ LA + + R+ + + R GGEEF I++ + + AC Sbjct: 747 DHFKRVNDSHGHAVGDQVLQELARRMQAGLRETDCLGRMGGEEFAILLPQTSQDGACLFA 806 Query: 227 VRICQLVDNHAITHSEGHINITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCM 285 R+C+ + G + +T++ GVS+ ++ +D + RAD A+Y K GRNR Sbjct: 807 ERLCRKIAGVPFATEAGALVVTISLGVSQMQSDDASVDCALARADGALYAAKSGGRNRVE 866 Query: 286 FI 287 Sbjct: 867 AA 868 >UniRef50_A5D1G5 Hypothetical signaling protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D1G5_PELTS Length = 343 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 9/219 (4%) Query: 74 LMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDV 133 +++ ++ + +L EN ++ Q+ +S L + S D Sbjct: 118 EIEALAENFNKMSLKLKEE-RENLFRQVALLEEQKREISVQKEELARVNSRLELLSITDP 176 Query: 134 LTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATY 191 LTG RR + + +L A L L+++DID FK VNDT+GH +GD VL+ + Sbjct: 177 LTGAYNRRYIISQLEQELAVAARHGLPLSLIMIDIDHFKKVNDTHGHQVGDEVLKDVVKV 236 Query: 192 LASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTA 251 L+ R + + RYGGEEF++I +EA R+ V + G + +T++ Sbjct: 237 LSGCIRTADVLGRYGGEEFVVIAPFTGFQEALVLAERLRDTVSRWPFETTYGFLKLTISL 296 Query: 252 GVSRAFPEEP------LDVVIGRADRAMYEGKQTGRNRC 284 GV+ +E +D ++ RAD MY+ K GRN Sbjct: 297 GVTTFNGKEEHYHNSLIDRLLARADEEMYKAKAQGRNLV 335 >UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7F5_MAGSM Length = 320 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 69/290 (23%), Positives = 121/290 (41%), Gaps = 15/290 (5%) Query: 7 EIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDN 66 + D I+++ + DA Y L + ++P + + + +D Sbjct: 38 QHDDIIISPDYPNDALYVLLEGQARVHLGGIQTEPLLILETGSCVGELS-------IIDQ 90 Query: 67 DELPYVRLMDSAHQHMHNCGRELMLAIVENHWQD-AHFDAFQEGLLSFTAALTD--YKIY 123 L + A + + + I +H + + + + + + + Sbjct: 91 GRASAYVLAEGATKLLSIDESRVWSLIHSSHTLACNLLNILSKRMRNNNRVIIEGSERQR 150 Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIG 181 L + +D LTG+ RR DES Q+R L L++LD+D FK NDT+GH G Sbjct: 151 KLETFAKVDPLTGIYNRRWFDESMQRQMRRVEHSQNPLSLIMLDVDHFKRYNDTHGHQGG 210 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D L LA ++ R + RYGGEEF +++ + R+ V+ I Sbjct: 211 DEALIALAHTISLHLRPGDIAARYGGEEFAVVLPDTDAVSGRMIAERLRTAVEALEIKDD 270 Query: 242 EGH--INITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNRCMFID 288 EG+ IT++ GV++ + + +I AD A+Y+ K GRNR + D Sbjct: 271 EGNSLSGITISLGVAQTSGTVDSVSELIATADAALYQAKNQGRNRVVVGD 320 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 5/208 (2%) Query: 84 NCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRR 141 + L +V N D EG++ +T+ K L + DVLTG+ RR Sbjct: 370 EVAADRALDVVVNKTVWHGRDNRPEGVIGVMLDITERKRMEAELRRLATTDVLTGIFNRR 429 Query: 142 VLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDY 199 E ++ A L ++LDID FK +NDT+GH +GDV ++ LA R Sbjct: 430 HFMEMARIEVDRARRHGRPLVALMLDIDHFKRINDTHGHPVGDVAIKALADVCTQIIRHE 489 Query: 200 ETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE 259 + + R GGEEF I++ + + A R+ Q V I G + T + GV+ Sbjct: 490 DVLGRMGGEEFAIVLTETDLDGALLVAERLRQAVAAIRIPAELGTVAFTTSIGVAERLEG 549 Query: 260 E-PLDVVIGRADRAMYEGKQTGRNRCMF 286 + +D ++ RAD A+Y K++GRN+ Sbjct: 550 DATIDTILSRADMALYSAKRSGRNKVAV 577 >UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QU32_CHLT3 Length = 606 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 110/282 (39%), Gaps = 6/282 (2%) Query: 9 DAILLNLNKAIDAHYQWL--VSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDN 66 L L K ++ H V + ++H + Sbjct: 323 FNYALTLGKELNLHNIVFESHRYLCLVFEKLEDYKAALEHHKLFYAVKTKIFSEEAERKT 382 Query: 67 DELPYVRLMDSAHQH--MHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL 124 L ++ + ++ +++ EN + Sbjct: 383 KNLLLQHELEEFKREAEIYRLKNVELVSANENLEVTTLALKEANAENQLLLERLREQAET 442 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGD 182 L D LTGL RR DE F+++ R L + + DID FK VND + H +GD Sbjct: 443 LERLVTYDGLTGLANRRHFDEQFEYEFRRTRRYKRPLSIAMSDIDFFKKVNDNFSHQVGD 502 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 VL+ +A+ R + V RYGGEEF+ I N E A RA +I + ++++ ++ Sbjct: 503 EVLKKVASIFRENVRAGDLVARYGGEEFVFIFTETNKESAIRAAEKIRKAIEDYDWSNVH 562 Query: 243 GHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + +T++ GV+ + D +I AD +YE K+ GRN+ Sbjct: 563 AGLKVTISIGVAEDAGFDGCDELIAAADSKLYEAKRNGRNQV 604 >UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQK2_CHRVO Length = 585 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 6/224 (2%) Query: 71 YVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSN 130 +R + A ++M + + + A + L + L K L + Sbjct: 365 ELRQLSDAMRNMTATLLARERQLADVNANLEQMVADRTEQLRESNRLLVQKAAQLAQLAR 424 Query: 131 MDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 D LTGL R +E + ++LLD+D FK VNDT+GH GD VLR + Sbjct: 425 NDALTGLHNRMAANEQLQEEHLRHGRSGAPYAVLLLDVDHFKRVNDTHGHDAGDRVLRHI 484 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 A L R + V R+GGEEF++++ + + A +I V+ +T Sbjct: 485 ADILRRAARATDFVARFGGEEFLLLLPETDADGAAVLAEKIRASVEQSQAPDVG---RVT 541 Query: 249 VTAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 ++ G++ P + ++ + RAD+A+Y K GRNR ++ Sbjct: 542 LSIGLATVVPADSQPEMAVKRADQALYRAKAAGRNRVEAAARED 585 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 82/185 (44%), Gaps = 6/185 (3%) Query: 111 LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDR 168 + L S +D LT + R D D + R L L+L D+D Sbjct: 1078 QGELYQQLESANLELKKLSCLDGLTQVANRHRFDMYLDQEWRRLMRSQQFLSLILCDVDH 1137 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGV 227 FK NDTYGHL GD L+ +A + + R + V RYGGEEF II+ A Sbjct: 1138 FKGYNDTYGHLAGDQCLQQVAQVIKNAVGRPADLVARYGGEEFAIILPDTPLRGALYVAE 1197 Query: 228 RICQLVDNHAITHSEGHIN-ITVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQTGRNRC 284 +I Q V I H + +T+++GV+ P +I AD A+Y+ K GRN+ Sbjct: 1198 QIRQQVQYLTIPHPQSTHQWVTLSSGVASFIPSAALSPKALINAADEALYQAKANGRNQV 1257 Query: 285 MFIDE 289 +F Sbjct: 1258 VFSPS 1262 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 88/206 (42%), Gaps = 16/206 (7%) Query: 96 NHWQDAHFDAFQ-EGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA 154 W + GL + + L+ +++ DV+T LP + + L +A Sbjct: 380 REWSTDELKLAEVLGLHLYMIVIQQRLTRLIRHQASYDVITQLPNGIIFNHRLSLALVDA 439 Query: 155 --EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYE-------TVYRY 205 + L +++LD+++FK +ND+ GH +GD +L + L + + + R+ Sbjct: 440 VNQGNMLGVVILDLNQFKRINDSLGHGVGDFLLTKVRDRLQNAL---DTYSIFNPLLARW 496 Query: 206 GGEEFIIIVKAAN-DEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA-FPEEPLD 263 G FII++ + +E+ ++ I + + G++ A + + + Sbjct: 497 HGARFIILLSKLSYSDESVMVCQKLLNDFQE-PFYVQSQAIYLGASLGIALAPYDGDTAE 555 Query: 264 VVIGRADRAMYEGKQTGRNRCMFIDE 289 +++ A+ AMYE K+ G+N Sbjct: 556 ILLKNAESAMYEAKKQGKNTYQIYRP 581 >UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XS30_DESMR Length = 498 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 4/166 (2%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIG 181 + IR++ D LT + RR DE +LR + + L+++DID FK +ND YGHL+G Sbjct: 314 QVKIRADHDGLTRIHNRRAFDERLIDELRRHQRYRHAMSLLMVDIDHFKGINDRYGHLVG 373 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D VLR + + L+ R + RYGGEEF++I+ +E+A R+ + H Sbjct: 374 DHVLREVGSILSETLRSTDFTARYGGEEFVVILPQTAEEQARILAERLRGAIAEARFVHD 433 Query: 242 EGHINITVTAGVSRAFPE--EPLDVVIGRADRAMYEGKQTGRNRCM 285 +ITV+ GVS P ++ +AD+A+Y+ K GRN+ Sbjct: 434 GEDFSITVSIGVSALQPGALTRRKDLLEKADKALYQAKHLGRNQVC 479 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 4/172 (2%) Query: 118 TDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDT 175 +D L+ + +D LTGL RR DE D + A+ +++ D+D FK VND Sbjct: 215 SDELQDELSEIARIDPLTGLYNRRAFDECCDIEFSRAQRSGAPFAIIMCDLDHFKRVNDR 274 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 YGH +GD VLR A L R ++ V R+GGEEF++++ + E+ ++ + Sbjct: 275 YGHHVGDEVLRRFANTLKEHIRKHDVVARFGGEEFVLLLPGKDTEQGLEVAEKLRAKTAD 334 Query: 236 HAITHSEGH-INITVTAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRNRCM 285 IT + + ++ + GV+ + V+ RAD A+Y K+ GRNR + Sbjct: 335 TQITIGDDVCLTLSASFGVAHYDSSDREWSAVLHRADNALYAAKKQGRNRVV 386 >UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5V1I0_ROSS1 Length = 681 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 4/172 (2%) Query: 123 YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLI 180 + +D LTG+ RR E+ + + ++ L ++++D+D FK VNDTYGH Sbjct: 503 AEARRHATIDELTGVWNRRTFFENVRREFQRSQRTLHPLAILMIDVDHFKSVNDTYGHAA 562 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VLR +A + R + + RYGGEEF + + + A + R+ V+ Sbjct: 563 GDQVLRGVAERCRNQLRVIDIIGRYGGEEFAVALPETDIHAAGQIAERLRIAVERAPFVT 622 Query: 241 SEGHINITVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 G I++T++ G + P++ LD VI RADRA+Y K++GRN Sbjct: 623 DYGSISLTISVGAAVYHPDDHVTLDAVIDRADRALYIAKRSGRNSVRVWSYP 674 >UniRef50_A6VEW2 Ggdef domain protein n=8 Tax=Pseudomonas RepID=A6VEW2_PSEA7 Length = 668 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 7/234 (2%) Query: 58 IDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAAL 117 + LD+ +L ++ M RE A E + S Sbjct: 438 VQQATDLDSLKLAVDSRLNGLLASMDEHQRE---QAEHEQEVSGRLQALMERVNSMEQDA 494 Query: 118 TDYKIYLL--TIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVN 173 + +L ++ D LTGLP R L E + ++ L L +LDID FK +N Sbjct: 495 KAFHTHLEDQRQKALTDPLTGLPNRAALSERLEQEVARRRRDGGELLLAVLDIDHFKRIN 554 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 D +GHL GD VL+ +A L R + + R+GGEEF++++ A + + R+ + Sbjct: 555 DDFGHLAGDKVLKIIAGELRKRLRQADFIARFGGEEFVVLLPATPLDAGRQLLERLRAAI 614 Query: 234 DNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFI 287 ++IT +AG++ E + RAD+A+Y K+ GR+R Sbjct: 615 AACPFHFKGEPLSITCSAGITAFVGNEAGEAAFERADQALYRAKRAGRDRLEVA 668 >UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B9_DESRD Length = 578 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 6/188 (3%) Query: 104 DAFQEGLLSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NL 159 + ++ +T+ K L + D LTGL RR E D ++ A+ +L Sbjct: 389 EERITSIVGSAQDITERKRAEEHLRYLATTDELTGLYNRRHFMEILDTEIERAKRYEQSL 448 Query: 160 YLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAND 219 L+ LDID FK +NDT+GH +GD L LA L + R +++ R GGEEF +I + Sbjct: 449 ALISLDIDHFKTINDTHGHAVGDAALEHLAAQLLACKRQPDSLGRLGGEEFALIAPHTDR 508 Query: 220 EEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA--FPEEPLDVVIGRADRAMYEGK 277 A RI ++ I ++ T++ GV+ + +D ++ RAD A+YE K Sbjct: 509 AGATELAERIRSELERTPIELESTSLHPTISLGVTALNIQDNDTIDALLKRADDALYEAK 568 Query: 278 QTGRNRCM 285 +TGRNR + Sbjct: 569 RTGRNRTV 576 >UniRef50_B1HU26 Response regulator receiver domain protein (CheY-like) n=2 Tax=Bacillaceae RepID=B1HU26_LYSSC Length = 589 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 5/234 (2%) Query: 58 IDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAAL 117 I P +E+P + + + G ++ + E+ + E + Sbjct: 345 IIPFHPRIFEEVPAIGAIFESIFLSLALGDKINIIKKEHQIMQETLNETLEYKVQERTKE 404 Query: 118 TDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDT 175 + L +N D LT +P R LD+ + + A L ++LLDID FK VND Sbjct: 405 LESAKLELEALANTDRLTQIPNRVRLDDVLEKEFEQATGSGTPLSIILLDIDHFKAVNDE 464 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 +GH +GD+VLR A L ++ R +TV R+GGEEF+++ ++A + Q ++ Sbjct: 465 FGHQVGDLVLRHAADLLKNYVRVEDTVGRWGGEEFLVVCPRTPLKDAVHLSENLRQQLEQ 524 Query: 236 HAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 H+ T + GV+ + + ++ R D+A+Y+ K+ GRNR + + Sbjct: 525 HSFPVVHHK---TSSFGVTSFVMGDTIHSLLSRCDKALYKAKEHGRNRVEYFQD 575 >UniRef50_Q21DN5 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21DN5_SACD2 Length = 588 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 8/243 (3%) Query: 56 RWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFD--AFQEGLLSF 113 + I L L L+ A N R L L + + + ++ ++ Sbjct: 345 QTIFSENALQFGSLIEAVLLSFALAERMNIERALRLDAQKRAYDIEYQAKIELEKRVIDR 404 Query: 114 TAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKL 171 T L + L S+ D LTGL RR L+ + + + + ++L+DID+FK Sbjct: 405 TEEL-ELANEKLRELSDTDQLTGLKNRRFLNHYLEDEFARSCRYGHRMSILLVDIDKFKH 463 Query: 172 VNDTYGHLIGDVVLRTLATYLASWTR-DYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 +ND YGH +GD ++ +A L R + V RYGGEEF I++ + E A R+ Sbjct: 464 INDNYGHTVGDTCIQAIAKVLLESNRQPSDLVARYGGEEFCIVLPETDVEGALHVANRLL 523 Query: 231 QLVDNHAITHSEGHINITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNRCMFID 288 +V N I + IN+T + G A P I AD A+YE K+TGR++ + Sbjct: 524 DMVRNTPIYAAANTINVTCSIGCYTAVPNSTKQIIAFIDNADTALYEAKKTGRDKVVVYK 583 Query: 289 EQN 291 + N Sbjct: 584 DDN 586 >UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLJ7_DESAH Length = 576 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 94/187 (50%), Gaps = 8/187 (4%) Query: 108 EGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLD 165 E LL T + L D LT + RR DE D + + + L L++ D Sbjct: 383 EKLLKETQKRLETANQKLQTLVTSDGLTMIANRRKFDEYLDQEWQRCKRAKVWLSLLMCD 442 Query: 166 IDRFKLVNDTYGHLIGDVVLRTLATYL-ASWTRDYETVYRYGGEEFIIIVKAANDEEACR 224 ID FK NDTYGH GD LR +A + + R + V RYGGEEF +I+ AC Sbjct: 443 IDYFKHYNDTYGHQAGDDCLRKIAQAMEKTVVRPMDLVARYGGEEFAVILSDTGLNGACH 502 Query: 225 AGVRICQLVDNHAITHSEGHI--NITVTAGVSRAFPEE---PLDVVIGRADRAMYEGKQT 279 RI + V N I HSE + ++T++ G++ P++ +D++I AD A+Y+ K+ Sbjct: 503 VARRIQEDVKNLNIAHSESSVSTHVTLSIGITCLIPDDEDLSMDLLIKTADEALYKAKRK 562 Query: 280 GRNRCMF 286 GRNR Sbjct: 563 GRNRMEL 569 >UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales RepID=A3WKT4_9GAMM Length = 364 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 3/174 (1%) Query: 119 DYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLR--NAEPLNLYLMLLDIDRFKLVNDTY 176 + L + D LT L RR + E L+ +AE N+ ++LLD+D FK VNDT+ Sbjct: 176 NLTHDQLRFYATTDPLTKLRNRRHMSELLKRALQNKHAEQRNVSVLLLDLDHFKSVNDTH 235 Query: 177 GHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNH 236 GH +GD VLR A L RD++ V R+GGEEF++ + N A + RI + + + Sbjct: 236 GHEVGDKVLRITADILRDTVRDHDKVSRWGGEEFLVFLPRTNLNHAAQVAERIRKAIAKY 295 Query: 237 AITHS-EGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 +I +T + GVS P++ ++ ++ RAD A+Y GK+ GRN E Sbjct: 296 PWHTVINENIQLTTSIGVSELKPDDSVNTLVKRADDALYRGKEAGRNWVELESE 349 >UniRef50_C7RTE2 Diguanylate cyclase with hemerythrin-like metal-binding domain protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RTE2_9PROT Length = 483 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 7/206 (3%) Query: 90 MLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIY--LLTIRSNMDVLTGLPGRRVLDESF 147 + +I+ A Q+ L A + + L + D LTG RR ++E Sbjct: 124 IASIIHEVTPSPEIPAMQQTLDRLRQANQELQQTVVELEQVAGTDKLTGAWNRRRIEECV 183 Query: 148 DHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRY 205 ++ L L+++DID FK +ND +GH GD VL+ + L S R + + R+ Sbjct: 184 RSEMDRLNRYDQPLSLLVVDIDHFKAINDQHGHGAGDQVLQAVTALLQSRLRGTDALARW 243 Query: 206 GGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVV 265 GGEEF+++ A R+ + + +TV+ G + P + + Sbjct: 244 GGEEFVVVCPNTGRSTAALLAERLRGQIASADFPLIG---QLTVSIGAAECSPGDTWEEW 300 Query: 266 IGRADRAMYEGKQTGRNRCMFIDEQN 291 RAD A+Y K GRN+ E+ Sbjct: 301 FQRADEALYRAKTGGRNQVQIAPEKT 326 >UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X290_DESRD Length = 769 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 7/234 (2%) Query: 55 GRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFT 114 G +I H + + Q++ GR + Q+ + + Sbjct: 533 GSFIRHFHQVLFSKGH----WQGELQNVTKSGRVFWEFTSISPLQNEKGEVTHYVAVRKE 588 Query: 115 AALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLV 172 L + D LTG+ RR E +L +A+ L L+L DID FK + Sbjct: 589 VTAQKQAESKLRELATRDSLTGVWNRRYFFELAARELESAQRYKHPLSLILYDIDHFKRI 648 Query: 173 NDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQL 232 NDTYGH+IGD VLR L + + R+ + + R GGEEF +++ E+A RI + Sbjct: 649 NDTYGHMIGDEVLRQLTQLVGANLRNVDLLARVGGEEFAVLLPHTYLEQAHTVARRILRG 708 Query: 233 VDNHAITHSEGHINITVTAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRNRCM 285 V+ I G + +T++ G+S + + L+ +I AD+A+Y K GRN Sbjct: 709 VNEAVIRTEAGPLQLTISIGMSSSAHADNCLESLIHDADQALYAAKNKGRNSIC 762 >UniRef50_C5V0N5 Diguanylate cyclase n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V0N5_9PROT Length = 454 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 67/302 (22%), Positives = 121/302 (40%), Gaps = 18/302 (5%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGL--------- 51 M+ +T+ A+L L A DA +V I D L Sbjct: 157 MVNASTKTQAVLEQLIYAEDAMLIVENRKLIGIVTAKDVIKMICDCVDMSLPIRNYMTQH 216 Query: 52 -CQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIV-ENHWQDAHFDAFQEG 109 + +++ ++ + + H GR ++ + + A Sbjct: 217 VKTINQRATIKAAIEHLKVNHFKRAIVVDDHNDVVGRITQRELIGITYGRWAELMKLHAH 276 Query: 110 LLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL---NLYLMLLDI 166 L + + K L S D LTG RR+ ++ + ++ +++LDI Sbjct: 277 ELGELVQVLESKNIQLQEESVTDPLTGAGNRRLFNQVTEAEIGRFYRHQMATFSVLMLDI 336 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAG 226 D FK +ND +GH GD VL+TL+ + R + R+GGEEF++++ A+ A Sbjct: 337 DFFKKINDVFGHPFGDEVLKTLSNRVKRRLRTSDVFARWGGEEFVVLLPTADINAASVLA 396 Query: 227 VRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 RI + + + +TV+ GV+ E + ++ R D A+YE K +GRN+ + Sbjct: 397 ERIRAEIADSPV----FEHQVTVSIGVAEYQRGESQEALLQRVDIALYEAKNSGRNKVVK 452 Query: 287 ID 288 + Sbjct: 453 AE 454 >UniRef50_Q21VE2 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21VE2_RHOFD Length = 398 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 4/202 (1%) Query: 92 AIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQL 151 I + + A E L + ++ L ++ D LTGL RR L ++ ++ Sbjct: 194 EIEQRKQAEQSLKAANEELHLRVFEVQRLQV-ELHEQAIHDPLTGLYNRRYLSDALAREI 252 Query: 152 RNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEE 209 A+ +L ++ DID FK VND+YGHL GD VL +A+ L R + RYGGEE Sbjct: 253 IQAKRANSSLTFVMADIDHFKFVNDSYGHLAGDEVLVQVASLLKKHARGSDIACRYGGEE 312 Query: 210 FIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA-FPEEPLDVVIGR 268 F+++ + E A + I Q +I H +I + ++ GV+ + + +I + Sbjct: 313 FLLVFPGTSLELAHKRAEEIQQNCAALSIQHEGKNIAVMLSFGVAAYPDHGQQWEQIIVK 372 Query: 269 ADRAMYEGKQTGRNRCMFIDEQ 290 AD+A+Y+ K GRN+ ++ Sbjct: 373 ADKALYQSKCNGRNQVTIFRDE 394 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 6/208 (2%) Query: 89 LMLAIVENHWQDAHFDAFQEGL-LSFTAALTDYKIYL-LTIRSNMDVLTGLPGRRVLDES 146 L L + + + A+ + K+ L +S D LT L RR L++ Sbjct: 558 LFLCTFKGEILPDIRQQLAKTVAEQLALAIANLKLREQLEEQSLRDPLTKLFNRRYLEQR 617 Query: 147 FDHQLRNAEPLNLYL--MLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYR 204 +L A+ + + +++D+D FK ND+ GH GD +L ++ T L + R + R Sbjct: 618 LSQELARAKRHHYSVGVLMIDVDHFKRFNDSLGHDAGDRILASIGTLLKNNIRTSDVACR 677 Query: 205 YGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN-ITVTAGVSRA-FPEEPL 262 YGGEE II+ A EEA + + Q + I +S +N +T + GV+ E Sbjct: 678 YGGEEITIILPDATLEEASQKAEFLRQAIAEMKIEYSGKIVNSVTASFGVACYPDHGETG 737 Query: 263 DVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 +I AD+A+Y+ KQ GRNR + ++ Sbjct: 738 QEIIQIADKALYDAKQAGRNRVIVAPKE 765 >UniRef50_C0QQG6 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QQG6_PERMH Length = 430 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 137/292 (46%), Gaps = 10/292 (3%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 + +K + L + H WL + + + E + C+F R ++ Sbjct: 143 IREKLRTVKYSEEELRFYVKEHLVWLNKIIEDI---KKLRKESSVELDVNKCKFSRLLED 199 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFD--AFQEGLLSFTAALT 118 L N ++ H+ +H ++ +I E ++ + FD Q+ F + LT Sbjct: 200 ETVL-NISKKKFNILKDIHEKIHKTAIDIYYSIEERNFINLLFDYINLQKLSAQFLSLLT 258 Query: 119 DYKIYLLTIRSNMDVLTGLPGRRVLDESF--DHQLRNAEPLNLYLMLLDIDRFKLVNDTY 176 +N+D LTG+ RR ++ +Q+ + + LLDID FK +ND+Y Sbjct: 259 VKIAVRSVEDANVDPLTGVLNRRPMEFILNNQYQISKISNRPVSIALLDIDDFKKINDSY 318 Query: 177 GHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNH 236 GHL+GD V++ +++ L R + ++R+GGEEF+I + +A + ++ + ++ Sbjct: 319 GHLVGDCVIKQVSSILQKSLRKSDLIFRFGGEEFLIFMPFTEKRDAFKVMEKLRKKIEEK 378 Query: 237 AITHSEGHINITVTAGV--SRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 I + I +TV+ GV + P E ++ +I RAD+ M K+TG+N+ + Sbjct: 379 DIICGKNTIKVTVSVGVEGATLHPNETVNDIIERADKKMLRAKRTGKNKVVI 430 >UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BW86_DESAD Length = 555 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 8/230 (3%) Query: 72 VRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNM 131 ++ + S + M + +G + + D + L + Sbjct: 320 LKRLSSVARQMTEGKFDCECTGTGVSHPPEEVTQLIDGFCAMQGKV-DRTVQELQKSAVT 378 Query: 132 DVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTGLP RR L + + A LM++DID FK++NDTYGH +GD+VL+ ++ Sbjct: 379 DQLTGLPNRRYLMKEGTRLVDIAIRAGQPCSLMIMDIDHFKVINDTYGHTVGDIVLQQIS 438 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 R + + RYGGEEF+++ ++ + R+ Q V+ + E + T+ Sbjct: 439 KAFQEVVRSSDIIARYGGEEFVVVAPGSDIDSGRTLAERLRQSVEARIFNNDEQPLTCTI 498 Query: 250 TAGVSRAFPE-----EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVIN 294 + GVS + + + ++ RAD A+Y+ K TGRNR + N + Sbjct: 499 SIGVSHYATDIKFGVDAYEDMLARADNALYKAKDTGRNRICIAEPHNKLT 548 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 5/211 (2%) Query: 83 HNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKI-YLLTIRSNMDVLTGLPGRR 141 G + + + ++ + A+ + ++ L RS D LTGL RR Sbjct: 794 ETLGLLYLYSDSPDQLCESKRQLARTVAEQMALAIANLQLREELQNRSIRDPLTGLFNRR 853 Query: 142 VLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDY 199 L+ES + ++ A N+ ++++DID FK NDT+GH GD VL+ + L S R Sbjct: 854 YLEESLEREINRACRNDHNVGVIMIDIDHFKRFNDTFGHDGGDAVLKEVGKLLKSSLRAS 913 Query: 200 ETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI-NITVTAGVSRA-F 257 + RYGGEE +I+ A+ E + ++ +L+ I H + IT + GV+ Sbjct: 914 DIACRYGGEEMTLILPEASIENTYKRAEQVRKLIKQINIEHKRQSLGTITASLGVACFPE 973 Query: 258 PEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 D V+ RAD A+Y+ K+ GR+R + + Sbjct: 974 HGMTGDAVVQRADTALYQAKKEGRDRVVGAE 1004 >UniRef50_Q30QW7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30QW7_SULDN Length = 439 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 69/290 (23%), Positives = 118/290 (40%), Gaps = 6/290 (2%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 +I+ +D L N+ I V+ + + + L I + Sbjct: 153 VIENYKALDTSLKNIKLKIKQDIATSVNFIYESTTFLLLNGNLIFLVWFILSTLIIVIVY 212 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 + A + R +++ E + F L L++ Sbjct: 213 RDIKYKINTIVKDSKEIASGDVDFEKRLCIVSYDELGQIIKSINVFINKLHKSHEELSEA 272 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGH 178 K L D LTG+ R +DE D +L+ + ++++DID FKLVNDTYGH Sbjct: 273 K-KELERLYITDQLTGVYNRVKIDEIIDIELKKQKRYGYVCSVIMIDIDLFKLVNDTYGH 331 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 L GD+ L+ + L S RD + V R+GGEEFII+ + + A + ++ Sbjct: 332 LAGDLTLKEFSALLKSNVRDTDNVGRWGGEEFIIVSPQTDQDGALSLANHLRSKIEEFTF 391 Query: 239 THSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 T T + GV+ ++ + +I AD+A+Y K +GRN+ + + Sbjct: 392 TTVGKK---TASFGVASCSEDDDIQSLIDNADKALYRAKNSGRNKVVTHN 438 >UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales RepID=D0J6R3_COMTE Length = 521 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 74/232 (31%), Positives = 107/232 (46%), Gaps = 10/232 (4%) Query: 68 ELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY--KIYLL 125 LP++ ++ AH + R+ A++ AF +F L L Sbjct: 273 SLPFIIMVAKAHSDIFTAWRK--RALIIACLMGVLTAAFIGLSFAFVTQLQRRIHAESEL 330 Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDV 183 + + D LTGL RR LDE D + A + L+ +DIDRFK+ NDTYGH GD Sbjct: 331 ALLARTDGLTGLNNRRRLDEMLDQEWHRARRNHSIFSLLFVDIDRFKVYNDTYGHQAGDD 390 Query: 184 VLRTLATYLASWTR-DYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 V+ T+A + R + RYGGEEFI+++ + E A I V ++ HS Sbjct: 391 VIATIAQCIGDNIRRPGDIAARYGGEEFIVVLPDTSLEGASCLAESIRAAVSQLSVEHSG 450 Query: 243 GHIN-ITVTAGVSRAFPEEPLD--VVIGRADRAMYEGKQTGRNRCMFIDEQN 291 ITV+ G + PE D VI AD A+Y+ K TGRN+ + + Sbjct: 451 SEFGYITVSIGCAAWEPEHDADVASVIRSADEALYKAKTTGRNKVVVFTKSP 502 >UniRef50_UPI0001AF5018 diguanylate cyclase, putative n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF5018 Length = 692 Score = 250 bits (638), Expect = 7e-65, Method: Composition-based stats. Identities = 67/287 (23%), Positives = 119/287 (41%), Gaps = 14/287 (4%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH 60 + + +++ +L A + H + + S + E + Sbjct: 416 LKQLNERLESFQSHLQAASEDHAE-VQSTARDLS---EQLREQVGGLQTSVQDASDLTSL 471 Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 120 LDN + MD + + +E+ + A + ++ L F + L + Sbjct: 472 KQVLDNRLEGLLSTMDHYQRKRDDREQEVASRLQS---LSARVASMEQEALGFRSNLEEQ 528 Query: 121 KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGH 178 + + +D LTGL R E + ++ + +L + +LD+D FK +ND YGH Sbjct: 529 RQK-----ALIDPLTGLANRAAWGERLELEMTQWQQAKNSLLVCILDLDHFKRINDGYGH 583 Query: 179 LIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAI 238 L GD VL+ +A L R + + R+GGEEF++++ A + V+ Sbjct: 584 LAGDKVLKIVANVLKKRLRPNDFMARFGGEEFVMLLPATPIGTGLTLLDELRTAVEECPF 643 Query: 239 THSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + ITV+ GV+ E D I RAD+A+Y+ K+ GRNR Sbjct: 644 HFKGERVTITVSLGVTALRQGERSDTAIKRADQALYKAKENGRNRVE 690 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 61/171 (35%), Positives = 96/171 (56%), Gaps = 3/171 (1%) Query: 118 TDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDT 175 D L ++ D LTGL RR + + D + + A L L L++LD+D FK +NDT Sbjct: 250 LDMAQKHLKRLASTDELTGLKNRRQIMKRLDEEYQRAIRLGEPLCLIMLDLDHFKKINDT 309 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 YGH GD+VL+ +A ++ R Y+ + R GGEEF+I+ EEA R+ V+ Sbjct: 310 YGHPFGDLVLKCVAGHMKKALRRYDVLGRIGGEEFLIVSPGTTREEAVVLAQRLRSTVEM 369 Query: 236 HAITHSEGHINITVTAGVS-RAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 I + + + ITV+ GV+ ++ +++++ RAD A+Y KQ GRNR + Sbjct: 370 EKIAYEDKKVTITVSCGVAFLYKGDDNVEILLKRADSALYIAKQEGRNRVV 420 >UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SY9_SULDN Length = 611 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 9/216 (4%) Query: 73 RLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMD 132 + ++ G L +N D E +S +T L +++D Sbjct: 402 EVWSGIMKNRTKKGDIYWLE--QNVVPTLDKDKKIESFVSVGVDITAKV--ELERLASID 457 Query: 133 VLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLAT 190 LTG RR++DE ++ NL L++ DID FKLVNDTYGH GD VL + Sbjct: 458 KLTGAYNRRMIDEFMKKEIFLHVRDSKNLSLIMADIDHFKLVNDTYGHQAGDAVLSDVGR 517 Query: 191 YLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVT 250 ++S R + RYGGEEFI+I + ++A +I + ++N T++ Sbjct: 518 IISSTIRKSDIFGRYGGEEFIVICPNTSSQQALILAQKIREEIENFHFAEVGHK---TIS 574 Query: 251 AGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 GV+ + ++ +I RAD A+Y K+ GRNR + Sbjct: 575 LGVATLIANDEVENIIKRADDALYIAKKEGRNRVVL 610 >UniRef50_Q2BP61 GGDEF/HAMP domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP61_9GAMM Length = 580 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 112/281 (39%), Gaps = 14/281 (4%) Query: 11 ILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELP 70 IL+ L A + R + E + Y D LG + + Sbjct: 306 ILVVLGIAFFLLSFLFEKWILRRIFRIIAALERSAEGDYADQMISDRKDELGLIADHINS 365 Query: 71 YVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSN 130 R + + L + E L L ++ Sbjct: 366 MNRRIAHRDVELREARNTLEHRVEERTRD-----------LQLEVNARKKAEEELIKLAS 414 Query: 131 MDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 D LT + RR D+ ++ + N L ++LLDID FK +ND YGH GD VL + Sbjct: 415 TDPLTRVLNRRAFDQRSREEIERSHRYNRELAIILLDIDHFKQINDQYGHQFGDKVLIDV 474 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 A + R + + R+GGEEFII++ ++ A R+ + + H IT ++IT Sbjct: 475 ANLIGPSLRAADCLCRHGGEEFIILLPETDEATALLIAERVRKSIAQHKITDRHDSLSIT 534 Query: 249 VTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCMFID 288 + GV+ EE + + RAD+AMY+ K +GRN+ + Sbjct: 535 ASFGVAVWRREEGDIQPAVYRADQAMYKAKNSGRNKVVAFT 575 >UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V6Y8_SULSY Length = 492 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 5/163 (3%) Query: 126 TIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDV 183 ++ D LTGL R ++D ++ A+ + ++L DID FK +NDTYGH GD Sbjct: 330 EKKAITDKLTGLFNRSIIDTLIQVEIERAKRNNKPISILLFDIDHFKKINDTYGHDKGDY 389 Query: 184 VLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 L+T+A R + V R+GGEEF+ I+ + + A + +I ++N+ Sbjct: 390 ALKTIAEIARRTLRKSDYVLRWGGEEFLAILPETDLDGATKVAEKIRSNIENYNFKDIG- 448 Query: 244 HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 +TV+ GV+ EPLD I RAD A+Y K GRNR Sbjct: 449 --RVTVSIGVTMLKIGEPLDNAIKRADEALYAAKNKGRNRVEV 489 >UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY29_9AQUI Length = 336 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 3/177 (1%) Query: 118 TDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDT 175 + + L ++ +D LTGL R L+E+ ++ A+ + L++ D+D FK VNDT Sbjct: 160 EELEKKRLLEKAIIDHLTGLYNRFYLEEAGAREIARAKRYGFPISLIMFDLDNFKQVNDT 219 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 YGH +GD VL A+ ++S R + RYGGEEF++++ EEA + RI + + Sbjct: 220 YGHQVGDRVLVKFASIVSSNVRSTDMPVRYGGEEFVVLLPHTYPEEAVKVAERIREEFEK 279 Query: 236 HAITHSEGHINITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 + +TV+AG+S E L +I AD+AMYE K+ G+NR Q Sbjct: 280 FLFRFEGEVMRLTVSAGISFCNSGECSLGELIQMADKAMYEAKEKGKNRIEVFSYQT 336 >UniRef50_Q6AL41 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AL41_DESPS Length = 516 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 98/240 (40%), Gaps = 10/240 (4%) Query: 58 IDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAAL 117 I G + E+ +R + Q + L L + + + E L Sbjct: 276 IKKAGSTFDIEIKKIRSIQDILQEANIRLSLLNLNYDQVNRKLVETTIELEKL----TEE 331 Query: 118 TDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNL--YLMLLDIDRFKLVNDT 175 K L +N+D LT R + D +L + +L L++ DID FK ND+ Sbjct: 332 LAKKNRQLETLANIDGLTNCYNHRYFQNALDQELSRSSRNSLAISLIMFDIDNFKRFNDS 391 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 YGH GD +L L + R + + RYGGEEF+II+ E+A ++ + Sbjct: 392 YGHQAGDFILCELTRLIQEQIRKDDVLARYGGEEFVIILPETEKEDALIVAEKVRHACEE 451 Query: 236 HAITHSEGHINITVTAGVSRAFPEE----PLDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 H+ + IT++ GV+ + I + D A+Y K+ GRN+ + + Sbjct: 452 HSFQNIHKTHQITISLGVATEHSAQISPLNKTSFIDKTDLALYSAKENGRNKVVVYSPKK 511 >UniRef50_A6X556 Diguanylate cyclase n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X556_OCHA4 Length = 473 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 6/287 (2%) Query: 4 KTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGP 63 + + + ++ L+ S++ + + HS FG W+ H Sbjct: 180 EAYRAFTLSHDFPLERESQRAALMEWSQSLLF-NLYGNSDSPLHSLASSDFGLWLQHKAD 238 Query: 64 LDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHW--QDAHFDAFQEGLLSFTAALTDYK 121 L + + +H+ N + + +++ A FQ + L++ Sbjct: 239 LMFSNSGTLENIRRNVEHIDNVLLPAINSARKDNPAGLAASLALFQTKIGEVKFLLSELF 298 Query: 122 IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHL 179 + + D LT RR + ++R A +L ++++DID FK +NDTYGH Sbjct: 299 QAAAAMETGRDPLTRALNRRFMPSILTREVRMASQKAMDLSVLMIDIDHFKNINDTYGHS 358 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 GD VL+ +A + S R + V+RYGGEEF++ + A++ +A + + + + Sbjct: 359 SGDAVLQQVAEAILSLCRPSDFVFRYGGEEFLVALVEADENKAFTIAEELRKQIAQQPLN 418 Query: 240 HSEG-HINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 +G ++T++ GV+ ++ ADRA+Y KQ GRNRC Sbjct: 419 LPDGARQSVTLSIGVAAFNGHPDYSHLVNAADRALYRAKQAGRNRCE 465 >UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VQQ9_PSEU5 Length = 466 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 61/173 (35%), Positives = 92/173 (53%), Gaps = 5/173 (2%) Query: 116 ALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVN 173 A L +N DVLTG+ RR + +L A +L L++LDID FK VN Sbjct: 293 ARLRLAHGQLAQLANTDVLTGVSSRRAFLAGLEAELARARRHNESLSLLMLDIDHFKRVN 352 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 D +GH IGD VL+ + A R ++ + R GGEEF I++ + E A +I V Sbjct: 353 DVHGHPIGDAVLKQFSETCAGMLRAHDLLGRLGGEEFAIVLPHTDAEGARCVAEKIRTAV 412 Query: 234 DNHAITHSEGHINITVTAGVSRAF--PEEPLDVVIGRADRAMYEGKQTGRNRC 284 + + G I +TV+ G+++ P E +D ++ RAD+A+YE K+ GRN+ Sbjct: 413 AQTPMPTAAGDITVTVSIGLAQMEGLPGE-VDQLMARADQALYEAKRGGRNQV 464 >UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C2A6_ACAM1 Length = 420 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 9/219 (4%) Query: 76 DSAHQHMHNCGRELMLAIVENHWQDAHFDA--FQEGLLSFTAALTDYKIYLLTIRSNMDV 133 + + ++ + +N + A + + L T D L++ +N D Sbjct: 196 NKVKERTQALQQQTLALAAKNKQLEEEIQAKLYAQQALEATNKKLDEANKQLSLIANHDA 255 Query: 134 LTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATY 191 LTGL RR DE + + L L++ DID FK NDTYGHL GD+ LRT+A Sbjct: 256 LTGLANRRRFDEYLQQIWKQTQREQQPLSLLICDIDFFKQYNDTYGHLEGDICLRTVAQK 315 Query: 192 LASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN--IT 248 + R + V R+GGEEF I++ + E R+ ++ + H ++ +T Sbjct: 316 IHQTIVRPLDLVARFGGEEFAIVLPNTDLEGGQVVAERLRMIIQKSQLPHRGSSVSEFVT 375 Query: 249 VTAGVSRAF--PEEPLDVVIGRADRAMYEGKQTGRNRCM 285 V+ G + P + +I RAD+A+Y+ KQ+GR++ + Sbjct: 376 VSIGAATVRSHPHTSVSSLISRADQALYQAKQSGRDQVV 414 >UniRef50_C1DCC5 GGDEF domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCC5_LARHH Length = 601 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 75/300 (25%), Positives = 129/300 (43%), Gaps = 24/300 (8%) Query: 3 KKTTEIDAILLN-------LNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFG 55 +K +++A L + ++D + SM S ++R TD + ++G Sbjct: 313 RKIYQLEASLKEAVYQQGLIKHSLDEATDSMRSMLDSFISRVGMLANQTDTYRERFSRYG 372 Query: 56 R---WIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLS 112 + L ++ + H + + EL A + +A + + L+ Sbjct: 373 EEVALTHDVVGLHGILGRLMQDTRAIHTDLASAHDELQGARHQVEAVNARIELLEAELVE 432 Query: 113 FTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFK 170 + + + D LTG RR LDE F + AE L L L+DID FK Sbjct: 433 ASTKIKE------------DQLTGALNRRGLDEQFMREASRAERSGQPLALALIDIDNFK 480 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 +ND YGH GD LR + ++ R + V R+GGEEF++++ + E+A R+ Sbjct: 481 QLNDRYGHRTGDNALRYVVDLVSERVRPSDAVARFGGEEFVVLMPDTSQEQALELIERLQ 540 Query: 231 QLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 + + +E + IT +AG++ E +I RAD AMY K G+NR + ++ Sbjct: 541 RDLTKTFFLANEDRLVITFSAGIAVWSAGESELDLIERADHAMYRAKLAGKNRVLAATDE 600 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 5/173 (2%) Query: 123 YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLI 180 + + D LTG R L + + ++ ++ L L++ DID FK +NDTYGH I Sbjct: 179 EKIKKLATTDPLTGAFNRYQLFKKLEEEIERSKRYGNHLSLIMFDIDNFKSINDTYGHNI 238 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VL+ + + R +T+ R+GGEEF+II NDE A +I +LV + + Sbjct: 239 GDQVLKITIDTIKNHIRKTDTLGRFGGEEFMIICPGINDEGARNIAEKIRKLVKDIKVE- 297 Query: 241 SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVI 293 G IT++ GV+ FP+E + I +AD A+Y K+ G+NR +NV Sbjct: 298 --GIPEITISVGVAEYFPDESITDFIKKADIALYSAKKKGKNRVEIYSSENVC 348 >UniRef50_UPI0001C3940A response regulator receiver modulated diguanylate cyclase n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C3940A Length = 392 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 7/191 (3%) Query: 108 EGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLD 165 E L + L + D LT + RR +E + + L+L D Sbjct: 178 EEALERSRIALKKTNQELQRLALYDDLTQVANRRRFNEYLAYNWHRCSREQEPIALILCD 237 Query: 166 IDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACR 224 +D FK NDT+GH GD L +A ++ R + V RYGGEEF II+ A + Sbjct: 238 VDYFKPYNDTFGHQAGDDCLHKIARAISGAIQRSVDLVARYGGEEFAIILPNTPINGAVK 297 Query: 225 AGVRICQLVDNHAITHSEGHIN--ITVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQTG 280 RI + V+N + H + +TV+ GV+ P +D +I +AD A+Y+ K G Sbjct: 298 VAERIRKQVENLRVPHPGSQSSDYVTVSLGVACKIPHSELSVDSLIAQADEALYQAKNQG 357 Query: 281 RNRCMFIDEQN 291 RN + + + Sbjct: 358 RNCTVIAESPS 368 >UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Desulfovibrio vulgaris RepID=A1VA66_DESVV Length = 827 Score = 249 bits (636), Expect = 9e-65, Method: Composition-based stats. Identities = 65/223 (29%), Positives = 99/223 (44%), Gaps = 5/223 (2%) Query: 71 YVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL--LTIR 128 ++++ H + R M + + +LS +T+ K L Sbjct: 588 LTEILETGHASFESVHRTAMGPVNVEVHARRIEFEGRFVVLSSARDITERKNLEAALLRE 647 Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 + D LTG+ RR + + A L +++LDID FK VND YGH GD VLR Sbjct: 648 ATTDPLTGVRNRRQFFVDANREFARALRHDSGLAVLMLDIDHFKNVNDLYGHQAGDEVLR 707 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 A R Y+ R GGEEF ++ AA+ EEA R+ + V+ ++ + + Sbjct: 708 AFAACCVEALRAYDVFGRLGGEEFAALLPAASPEEAMETAERLRKRVERRSVVYEGTALQ 767 Query: 247 ITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCMFID 288 TV+ GV+ + D ++ RADRA+Y K GRNR Sbjct: 768 CTVSVGVTSLAAADLGFDDMLRRADRALYAAKDHGRNRSEMAP 810 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 89/205 (43%), Gaps = 6/205 (2%) Query: 86 GRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDE 145 +EL Q A + T L + D LT L RR L E Sbjct: 285 EQELFGPADLEFAQAVITAAVAVIQRAQMVESTMADNARLEQLAQTDPLTQLLNRRALTE 344 Query: 146 SFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVY 203 ++ A L L+++D+D FK VNDTYGHL+GD VLR + L R + Sbjct: 345 RITAEMERALRYDSTLALLMIDLDHFKKVNDTYGHLVGDDVLRDVGQLLGHTIRGSDITA 404 Query: 204 RYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE--GHINITVTAGVSRAFPE-- 259 RYGGEEF++++ +D A RI ++ H + +T + GV+ Sbjct: 405 RYGGEEFLVLLPETDDAGAVAFAERIRVAMEEHPFARDSMAEPLKLTASIGVAVFPAARI 464 Query: 260 EPLDVVIGRADRAMYEGKQTGRNRC 284 E ++ + RAD A+Y K GRNR Sbjct: 465 ENVEDLFARADAALYRAKAEGRNRV 489 >UniRef50_Q0A8W9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8W9_ALHEH Length = 302 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 7/212 (3%) Query: 77 SAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTG 136 Q +H G + + I A + + ++ L ++N D LTG Sbjct: 95 RELQALHRSGEVIPVEIALVPVDVA--GTRMVMVSAIDLSVRKALEAQLHHQANHDPLTG 152 Query: 137 LPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLAS 194 L R +E ++ + L++LDID FK VNDTYGHL GD VLR A L Sbjct: 153 LVNRYHFEELLAREIERGQRYGGGFALIMLDIDHFKAVNDTYGHLEGDKVLRRFAEELTG 212 Query: 195 WTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVS 254 R +T+ R+GGEEF++++ + A I V+ + +TV+ GV+ Sbjct: 213 KIRAADTLARWGGEEFMLLLPGTDIAGARALAEAIRVAVNGCRMPVPG---QVTVSLGVT 269 Query: 255 RAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 E + ++ R D A+Y K GR++ + Sbjct: 270 GYRNGESVWGLLKRVDEALYAAKLAGRDQVVV 301 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 6/186 (3%) Query: 109 GLLSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLL 164 G + +TD K L + +D LT L RR + + + + L ++ Sbjct: 239 GAMEIIRDITDSKRLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQRFLRYHHPMALCMI 298 Query: 165 DIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACR 224 DID FK VND YGHL+GD VL +A L R + + RYGGEEF+I++ + + AC Sbjct: 299 DIDHFKSVNDRYGHLVGDTVLCIVAQTLHDNLRQVDILARYGGEEFVILLPETDLQTACA 358 Query: 225 AGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQTGRN 282 + R+ V I G +++T++ GV L+ ++ AD+ +Y KQ GRN Sbjct: 359 STERLRVAVAERRIETPSGPVSVTLSLGVVAIADGPAMTLERLLDAADQMLYRAKQAGRN 418 Query: 283 RCMFID 288 R D Sbjct: 419 RVEIWD 424 >UniRef50_C0QEH9 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QEH9_DESAH Length = 341 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 6/193 (3%) Query: 95 ENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA 154 +N A ++ ++ T L + K L + +D LTGL RR LDE +L + Sbjct: 145 QNRELIQLNQALEQKVMERTREL-EKKNRELEQIAIIDQLTGLFNRRKLDEMLSRELIRS 203 Query: 155 EPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFII 212 + L+++DID FK VNDT+GH IGD VL+ A L R+ + + R+GGEEF+I Sbjct: 204 RRYGNSFGLIMVDIDFFKTVNDTHGHQIGDQVLQRFADQLKQGVREVDVLGRWGGEEFLI 263 Query: 213 IVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRA 272 I + ++ V + A+ T + GV+ + LD ++ + D+A Sbjct: 264 ICPETIKDYLILLAEKLRIAVQSIAVPGVGEK---TASFGVTVYEKGDNLDTLVDKVDKA 320 Query: 273 MYEGKQTGRNRCM 285 +Y K+ GRNR Sbjct: 321 LYLAKEKGRNRVE 333 >UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Arthrospira RepID=B5W0E3_SPIMA Length = 1380 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 5/211 (2%) Query: 83 HNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL-LTIRSNMDVLTGLPGRR 141 G + + A+ + + L +S D LTGL RR Sbjct: 1170 ETLGLFYLSTDSATALSEGKQQLAHTVAEQIGMAIANLNLRATLEHQSIRDPLTGLFNRR 1229 Query: 142 VLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDY 199 L+E ++ A+ + ++++DID FK NDT+GH GD VL+ + L R+Y Sbjct: 1230 YLEEYLSQEIARAQRQKHPIGVIMMDIDNFKHFNDTFGHDAGDYVLQKVGELLKQKVREY 1289 Query: 200 ETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI-NITVTAGVSRAFP 258 + RYGGEE +I+ ++ E +I + + + + H+ +IT + GV+ Sbjct: 1290 DVACRYGGEEMTLILPGSSLENTSMRAEQIREAIASLVVASGGQHLGSITASFGVAAFPK 1349 Query: 259 EEPLD-VVIGRADRAMYEGKQTGRNRCMFID 288 + +I AD A+Y K GRNR + I Sbjct: 1350 HGSIGIDLIQAADAALYRAKADGRNRVVIIP 1380 >UniRef50_A8TN49 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN49_9PROT Length = 305 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 77/290 (26%), Positives = 128/290 (44%), Gaps = 4/290 (1%) Query: 6 TEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLD 65 T D I+ + +A L S +A+ ++ + G W Sbjct: 11 TRYDRIVSAIEQARAEASDRLTRFHRSAIAKVRPDADLLKLAGHESSTLGVWYAERKDAQ 70 Query: 66 NDELPYVRLMDSAHQHMHNCGRELM-LAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL 124 + P + + H+ + N L A + +DA E + +F Sbjct: 71 PLDQPAFETLVALHEALLNHIALLAGRAWKDAKVPVEEYDALLEKVQAFDELAGRLVRAF 130 Query: 125 LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGD 182 S++D LTG R+V+ +++ A L + DIDRFK +ND +GH +GD Sbjct: 131 QAAISDLDPLTGAQTRQVMLRDLKREVQRARRSGTPGCLAIADIDRFKSINDGHGHAVGD 190 Query: 183 VVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSE 242 VL ++ L R Y++VYRYGGEEF++ + EEA R R+ + + H + Sbjct: 191 SVLAAVSGLLIESLRPYDSVYRYGGEEFLLCLPETGPEEARRVLDRVRERIAGHPVMIDG 250 Query: 243 GH-INITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 G + +T++ G++ P PL+ +I RADRA+Y K++GRNR + Sbjct: 251 GKNLVVTISFGLTLMTPRRPLEELIDRADRALYLAKESGRNRVEVWRPET 300 >UniRef50_Q7NSG5 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NSG5_CHRVO Length = 420 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 24/301 (7%) Query: 3 KKTTEIDAILLN-------LNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFG 55 ++ +++ L L ++D L ++ V+R A + TD + Sbjct: 131 QQIYQLETSLKEVIRKQGMLKSSLDEAASSLRALLDRFVSRLALMTDSTDEFHGKIQAHS 190 Query: 56 RWIDHLGPLDNDELPYVRLMDSAHQHMHNCGR---ELMLAIVENHWQDAHFDAFQEGLLS 112 + + +D LM+ + R EL+ A + + + L + Sbjct: 191 EKLKQMPNVDELGGIIGSLMEDTSIMQLDLTRSRDELVSAKEQVEAAEHRIRELETALEA 250 Query: 113 FTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFK 170 +A + + D LTG RR L E F ++ AE L + L+D+D FK Sbjct: 251 ASAKVKE------------DQLTGAYNRRGLAEYFQREIGRAERTAAPLSIALIDVDNFK 298 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 +ND YGHL GD L+ L + R + V R+GGEEF+I++ + EA + R+ Sbjct: 299 QLNDRYGHLAGDDALKYLVDTIKHSLRPADIVARFGGEEFVILMPDTPETEAVQTVQRLQ 358 Query: 231 QLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 + + + + IT +AGV+R E V+ RAD AMY+ K G+NR ++ Sbjct: 359 RELTKTFFLANNDKLLITFSAGVARWHLGEQESDVLERADHAMYQAKINGKNRVCSAEDM 418 Query: 291 N 291 Sbjct: 419 P 419 >UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VMP7_9CYAN Length = 505 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 92/196 (46%), Gaps = 9/196 (4%) Query: 97 HWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRN--A 154 A + + AL + L +D LTG+ RR D+ + + Sbjct: 297 QLIAAQLGTLMQRI-KVETALFEA-NQKLKYLVTIDGLTGIANRRKFDQYIHREWQRLFR 354 Query: 155 EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIII 213 E L L L+L DID FK NDTYGH GD LR +AT + R + V RYGGEEF +I Sbjct: 355 EQLPLSLILGDIDFFKRYNDTYGHQAGDDCLRNVATKIRLLVKRPADLVARYGGEEFAVI 414 Query: 214 VKAANDEEACRAGVRICQLVDNHAITHSEGHIN--ITVTAGVSRAFPEE--PLDVVIGRA 269 + N + A I Q V+ I H + +T++ GVS P ++ +I +A Sbjct: 415 LPNTNAKGAIHVAETIRQGVETLKIPHGGSESSKYVTLSLGVSSLIPNSLVNVEGLINQA 474 Query: 270 DRAMYEGKQTGRNRCM 285 D+A+Y K GRN+ + Sbjct: 475 DQALYRAKAGGRNQTV 490 >UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV3_9DELT Length = 519 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 6/187 (3%) Query: 102 HFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNL 159 H + + + + + D LTGL RR E D +L L Sbjct: 324 HEIGIIARHFNKLLEVVERLLREKDQLAGTDQLTGLNNRRRFKELLDQELIRYRRIPKPL 383 Query: 160 YLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAND 219 L++ DID FK VNDTYGH GD+VL+ +A L + R +T R+GGEEF++++ A Sbjct: 384 SLLIFDIDHFKRVNDTYGHETGDLVLKEMAQLLQATVRRTDTPARWGGEEFLVLLPATTA 443 Query: 220 EEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDV-VIGRADRAMYEGKQ 278 E A ++ Q ++ H +T + GV+ E + ++ R D+A+Y+ K+ Sbjct: 444 EAAMALAEKLRQAIEEHDFPRVG---RVTASFGVAAFHDGEQEESALLRRVDKALYQAKR 500 Query: 279 TGRNRCM 285 GRNR + Sbjct: 501 QGRNRVV 507 >UniRef50_B8FCK6 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCK6_DESAA Length = 301 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 102/255 (40%), Gaps = 6/255 (2%) Query: 37 DASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVEN 96 + Y +C+ + + L + + + + E Sbjct: 49 ILLDLIMPGMDGYAVCEKIKGSPATADIPVIMLTSKAETADKVRGLEAGASDYVTKPFEE 108 Query: 97 HWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP 156 A + + L +N D LTGL R ++ + A Sbjct: 109 GELVARVNTHLR--IKELYESLQETNRQLQELANRDGLTGLYNHRYFQDAMTKDFQRAMR 166 Query: 157 L--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIV 214 +L +L DID FK NDTYGH GD+VL TLA + RD + RYGGEEF +++ Sbjct: 167 YHESLSCVLCDIDFFKKFNDTYGHQTGDIVLSTLARIVEDSLRDTDLAARYGGEEFALVL 226 Query: 215 KAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLD--VVIGRADRA 272 A R+ + V+ H ++ +++T++ GV+ + D +I AD+A Sbjct: 227 YHTPAAAAFMVAERLRESVEQHEFIANDLSLSVTISVGVATYPHPDIPDHKTLIECADKA 286 Query: 273 MYEGKQTGRNRCMFI 287 +Y+ K+ GRN+ + Sbjct: 287 LYKAKENGRNQVISF 301 >UniRef50_Q47Y21 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y21_COLP3 Length = 722 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 60/267 (22%), Positives = 102/267 (38%), Gaps = 17/267 (6%) Query: 29 MFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRE 88 + ++ I + + + + + S R+ Sbjct: 467 LLVAIFFALVLNYSIISPVRKLTYALNDMSEGQNNIHFNHIDSKDEIGSMQLAFEKLRRK 526 Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL--LTIRSNMDVLTGLPGRRVLDES 146 L+ D ++ + + K + D LTG R +E Sbjct: 527 LL-----------QGDVYKATVSQQQKEIKYRKSQQDHFQQLALTDALTGAVNRHHFNEV 575 Query: 147 FDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYR 204 D ++ N L +MLLDID FK VND YGH +GD VL R + V R Sbjct: 576 LDQEIANVNNHGSPLSIMLLDIDHFKSVNDRYGHGVGDEVLVMFYQTCVEAVRSSDVVAR 635 Query: 205 YGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE--EPL 262 GGEEF+II+ A + R+ Q + + + I++TV+ GVS+ E Sbjct: 636 IGGEEFVIIMPNTQLVNAQKFAERLRQKIAKLELNIANNQISVTVSIGVSQWQSEYFTNA 695 Query: 263 DVVIGRADRAMYEGKQTGRNRCMFIDE 289 + + AD+++Y+ K +GRN+ + + Sbjct: 696 ETFVAHADKSLYQAKNSGRNKVVVAQQ 722 >UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NS82_9VIBR Length = 385 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 60/175 (34%), Positives = 91/175 (52%), Gaps = 3/175 (1%) Query: 112 SFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRF 169 S T LT + + S D LT L RR L+E ++ + L ++LLDID F Sbjct: 208 SVTWMLTGRLVATIYDTSIKDELTQLYNRRALEELLPKEIARSSRHKQPLSVLLLDIDHF 267 Query: 170 KLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRI 229 K VNDTYGH GD VLRT L TR + +RYGGEEF++++ + E+A ++ Sbjct: 268 KKVNDTYGHQAGDRVLRTTGKLLILQTRKDDLSFRYGGEEFLVLLPNTDVEKAVIVAEKL 327 Query: 230 CQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + + + + + T + GV++ E+ I RAD+A+Y K+ GRN+ Sbjct: 328 REAIKRARMLPTNVD-SCTASFGVTQFNGEDDWQTAIERADQALYSAKENGRNQV 381 >UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9R7Y4_AMMDK Length = 615 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 106/200 (53%), Gaps = 5/200 (2%) Query: 95 ENHWQDAHFDAFQEGLLSFTAA-LTDYKIYLL-TIRSNMDVLTGLPGRRVLDESFDHQLR 152 + ++ DA EG +S TAA + + ++ L S +D LT L RR L+E HQ+ Sbjct: 395 QPYFFDAETKRSIEGYVSITAAMIANLRLSELNRRLSLIDPLTQLYNRRFLEEYLTHQVV 454 Query: 153 NAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEF 210 A+ ++ +D+D+FK VND YGH +GD+ L LA + R+ + V RYGGEEF Sbjct: 455 EAQRLNRPFSILFIDVDQFKNVNDFYGHEVGDIALTLLAQTIKQNLREADAVVRYGGEEF 514 Query: 211 IIIVKAANDEEACRAGVRICQLVDNHAITHS-EGHINITVTAGVSRAFPEEPLDVVIGRA 269 I ++ + E A +A ++ + V I +I +TV+ GV++ + VI RA Sbjct: 515 IAVLPGTDLEGAAQAAEKVRRAVAETPICLESGENIFLTVSIGVAQYRIGLNPEEVIQRA 574 Query: 270 DRAMYEGKQTGRNRCMFIDE 289 D AMY+ K G+N + E Sbjct: 575 DEAMYQAKIKGKNLVVAYHE 594 >UniRef50_B7RW73 GGDEF domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RW73_9GAMM Length = 610 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 3/200 (1%) Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFD 148 L +A+ + A + + + TA L+ L + +D LTGL RR E + Sbjct: 402 LAMAVSMANRFTAMYSKLESEVAERTADLS-AANRRLAEAARVDHLTGLLNRRGFTEEAE 460 Query: 149 HQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 ++R + L+L D+D FK ND +GH+ GD VL+ +A+ L TRD + + R+G Sbjct: 461 TEIRRMFRSGKSFSLVLTDVDNFKSFNDRHGHVCGDHVLKRMASILEERTRDVDRIARWG 520 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVI 266 GEEFI+++ E A ++ + + + + IT+T G++ E LD I Sbjct: 521 GEEFILLLPETETEGAANLAEKLRESIAENVFEFDNQRLKITMTFGIASFRRGESLDTCI 580 Query: 267 GRADRAMYEGKQTGRNRCMF 286 RAD A+Y GK+ GRN+ M Sbjct: 581 ARADTALYHGKEGGRNKVMI 600 >UniRef50_Q3A8D4 Putative sensory transduction system, regulatory protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A8D4_PELCD Length = 536 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 89/199 (44%), Gaps = 8/199 (4%) Query: 98 WQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--E 155 W + A + L++ D L S D LTG+ RR D+ + + A + Sbjct: 328 WFVSRRAASVDKLVAQRTYELDEANRRLASLSLTDGLTGIANRRSFDDHLAQEWKRALRD 387 Query: 156 PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIV 214 L L+++DID FK ND YGHL GD LR +A L S R + V RYGGEEF +I+ Sbjct: 388 RHPLSLIMVDIDHFKAYNDYYGHLAGDDCLRQVARMLQSVVARPGDLVARYGGEEFALIL 447 Query: 215 KAANDEEACRAGVRICQLVDNHAITHSEGHIN--ITVTAGVSRAFPE--EPLDVVIGRAD 270 + A G V I H + +TV+ GV+ P + +I AD Sbjct: 448 PQTD-HGAKSLGESCRAAVAGGKIPHHASPVKPVVTVSVGVATMIPHVEDDPSQLIKAAD 506 Query: 271 RAMYEGKQTGRNRCMFIDE 289 +AMY K GR+ + Sbjct: 507 QAMYRAKLLGRDHVVVEAP 525 >UniRef50_A8UWP4 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWP4_9AQUI Length = 425 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 101/198 (51%), Gaps = 7/198 (3%) Query: 98 WQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL 157 + A D LL+F TD L S +D LTG+ R D+ F + R A Sbjct: 220 ERHARKDFLLTMLLAFEKRKTDELNVRLRDISFIDGLTGVANRLRFDDFFRKEWRRARRT 279 Query: 158 --NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTR-DYETVYRYGGEEFIIIV 214 + +++LDID FK ND GHL GD L+ +A + S R D + V RYGGEEF++++ Sbjct: 280 KRPISILMLDIDFFKNYNDLLGHLEGDECLKNVAKTIQSHIRADVDLVARYGGEEFVVVL 339 Query: 215 KAANDEEACRAGVRICQLVDNHAITHSEGHIN--ITVTAGVSRAFPEEPL--DVVIGRAD 270 + + A + RI + ++ I H ++ +TV+ GV+ P + L +V++ AD Sbjct: 340 PETDLKGALKVAERIRRDIEGLKIAHPGSQVSKFVTVSIGVASIVPIDNLKKEVLLNMAD 399 Query: 271 RAMYEGKQTGRNRCMFID 288 +A+Y K+ GRNR Sbjct: 400 KALYVAKKRGRNRVEAYS 417 >UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Phytochrome (GAF) sensor n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YS99_9CYAN Length = 628 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 62/184 (33%), Positives = 85/184 (46%), Gaps = 7/184 (3%) Query: 111 LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDR 168 + L + D LT + RR D+ + L L++ DID Sbjct: 443 QAELYEQLKIANQELEKMAMTDGLTLVANRRFFDKILSQEWNRLRREIGTLSLIICDIDY 502 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGV 227 FK NDTYGHL GD L+ +A L R + V RYGGEEF I++ + E A Sbjct: 503 FKRYNDTYGHLAGDSCLKKVAQVLQEEVKRSGDLVARYGGEEFAILLPKTDLEGAILVSE 562 Query: 228 RICQLVDNHAITHSEGHIN--ITVTAGVSRAFPEEP--LDVVIGRADRAMYEGKQTGRNR 283 IC V ITH + + +T++ GV+ PE P +I RAD+A+YE K+ GRNR Sbjct: 563 VICSKVRALQITHEKSLVAPYVTISVGVASTIPEPPLIPKTLILRADQALYEAKKNGRNR 622 Query: 284 CMFI 287 Sbjct: 623 VFVA 626 >UniRef50_B4S1M7 GGDEF domain protein n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S1M7_ALTMD Length = 949 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 5/235 (2%) Query: 55 GRWIDHLGPLDNDELP--YVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLS 112 W L+ +P + + + + + + Sbjct: 715 NEWSSDEAQLEVIIIPPWWDKPIWRVVIVLIILLLITSIVWFRIASLKKRSAELALKVEE 774 Query: 113 FTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFK 170 T L + + LT S D LTGL RR + + + + L+LLDID FK Sbjct: 775 KTKDLEEV-VEKLTRLSTQDSLTGLKNRRYFTQRAKAEWQEFQRHGHTFSLLLLDIDYFK 833 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 +ND YGH GD VL +A L S R+ + + R+GGEEF+I++ + ++EA ++ Sbjct: 834 RINDEYGHQTGDSVLVKIAKILQSSLRESDVIARWGGEEFLILLPSLKEQEAYWVAEKLR 893 Query: 231 QLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 + V + I +N+T+T GV+ + ++ I D+ +Y+GK+ GRN + Sbjct: 894 KAVASLVIDSPPYQLNVTITCGVADIKNYDSIEACIHAVDKKLYKGKEAGRNAVV 948 >UniRef50_C0QJ78 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ78_DESAH Length = 470 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 118/295 (40%), Gaps = 16/295 (5%) Query: 8 IDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQ---FGRWIDHLGPL 64 + + ++ + + ++ + ++ + D+ L F + + Sbjct: 175 LHGHITDIGRDREKLAIFVKDIVRQILGMEEIIRLSFDHFGAMLEPGDAFDLVLKNEIDQ 234 Query: 65 DNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHF--------DAFQEGLLSFTAA 116 L ++ + + + A+ + +A F+ Sbjct: 235 ARKTLDIDGNLEEVKARLASSFATIEGALKQKVIDEAQIKGFVTSNHQTFETEFEKLRTE 294 Query: 117 LTDY--KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLV 172 L L + N D LTG RR ++ + ++ L+ +D D FK + Sbjct: 295 LVQATAHSRELERKINQDPLTGAYNRRAYNQRIEDEMDRFLRYGTLFSLLFIDADHFKNI 354 Query: 173 NDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQL 232 NDTYGH IGD L+ + + R + + RYGGEEF++++ + A +I + Sbjct: 355 NDTYGHAIGDKCLQEIIKRASKLIRKSDMLARYGGEEFVLVMPETDAANAKNVAEKIRKT 414 Query: 233 VDNHAITHSEGHINITVTAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRNRCMF 286 ++ A + + + +TV+ GV++ + V+GRAD A+Y+ KQ GRNR + Sbjct: 415 IERIAFLYKKDAVKVTVSIGVTQVRENDAVPQDVLGRADAAVYQAKQDGRNRVVL 469 >UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n=3 Tax=Zymomonas mobilis RepID=Q5NP17_ZYMMO Length = 1008 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 3/203 (1%) Query: 84 NCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVL 143 ++L + + + + T L + + L +N D LTGL RR Sbjct: 805 KIALIIILVLFLYDLISNQIRKLRLMITNKTLELQETNLR-LKELANTDELTGLLNRRAF 863 Query: 144 DESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYET 201 E F+ + +LDID FK +ND GHL GD V++ +A + R + Sbjct: 864 TEMFEKNCAQFSKTKDQFSVFILDIDFFKKINDNEGHLAGDAVIQYIAQKITENIRQQDF 923 Query: 202 VYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEP 261 RYGGEEF+I++ A+ E C+ RI + + + I +TV+ GV+ + Sbjct: 924 AARYGGEEFVIMLPNADMETTCQVASRIGNAISEKPVPYQGREIPVTVSIGVAVMKENDD 983 Query: 262 LDVVIGRADRAMYEGKQTGRNRC 284 + ++ RAD +Y K GRNR Sbjct: 984 ANSLLERADERLYMAKNQGRNRV 1006 >UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q525_NITSB Length = 350 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 18/290 (6%) Query: 1 MIKKTTEIDAILLNLNKAIDAHYQ--WLVSMFHSVVARDASKPEITDNHSYGLCQFGRWI 58 +++ ++ I+ L S+ S+ + + D H+ L + Sbjct: 72 ILQYYKQLFQKNPKKVHEIEDEEIHTKLKSIASSIEEKLSQIISTIDTHNDTLQDKTEAL 131 Query: 59 DHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALT 118 D +++ + L +EN + + E + L Sbjct: 132 QEKEHQAADP--------EILKYLKEILQNLEELRMENSQLNEQLKKYYEEINHLRRELR 183 Query: 119 DYKIYLLTIRSNMDVLTGLPGRRVLDESFDH---QLRNAEPLNLYLMLLDIDRFKLVNDT 175 D K + D LT L RR +E F + E L++LDID FK +NDT Sbjct: 184 DTKNK-----AEFDYLTELFNRRKFEEYFHKLLKEFNEGEGKPFSLIILDIDDFKQINDT 238 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 YGHL+GD VL+ L++ + ++ R GGEEF I++ +EA R+ + V+N Sbjct: 239 YGHLLGDEVLKNLSSLIKTFLHSAHIPARIGGEEFAILLPETPLDEAKTIAERLRKTVEN 298 Query: 236 HAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 I +EG +N TV+ GV++ + +D ++ RAD A+YE K+ G+N + Sbjct: 299 RTIPIAEGDLNFTVSIGVAQVQKGDTMDSLLKRADEALYEAKRNGKNMVI 348 >UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZM04_9GAMM Length = 291 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 15/202 (7%) Query: 110 LLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDID 167 LL++++ + +I L S D LTGL RR +D D ++ + L +++LDID Sbjct: 89 LLTYSSVESIRRITRLEHESITDPLTGLFNRRHMDRRLDEEVARSRRYGQPLSVVMLDID 148 Query: 168 RFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGV 227 FK +ND GHL GD +L ++A L R + R+GGEEF++I + + A + Sbjct: 149 EFKGINDRLGHLAGDYILESIAQRLRQNLRRVDLAARFGGEEFVVIAPHTDQDAALQLAE 208 Query: 228 RICQLVDNHAITHSEG---------HINITVTAGVSRA----FPEEPLDVVIGRADRAMY 274 ++ + I + +TV+ GV+ + D ++ RAD A+Y Sbjct: 209 KLRSEIAQTPIILKGHEHVPPCAPDELYVTVSVGVASLNIEPDSRDNADFLLQRADDALY 268 Query: 275 EGKQTGRNRCMFIDEQNVINRV 296 K GRNRC + + Sbjct: 269 RAKAGGRNRCESGPSRASLVAA 290 >UniRef50_A4BD76 GGDEF domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BD76_9GAMM Length = 476 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 128/294 (43%), Gaps = 19/294 (6%) Query: 15 LNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRL 74 LN + Q + A+ +I + S L + N ++ R Sbjct: 183 LNDRLQEEKQQFEGYLSELNAKLTRIQQIVEADSTTLAELKELHASFNDSINAQMHEARE 242 Query: 75 MDSAHQHMHNCGRELMLAIVENHWQ--------DAHFDAFQEGLLSFTAALTDYKIY--- 123 H + EL+ ++ + ++ Q+ TA + D + Sbjct: 243 KIDRHYQVETLKSELLTSLDSIASRLEAYQSSYESKLQTLQKSKAEMTAHVIDLEKENRN 302 Query: 124 ------LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDT 175 S +D LTGLP R+ D +L AE + L + ++DID FK +ND Sbjct: 303 LLTELHKERQLSMLDPLTGLPNRQGFDRRLSAELARAERYDQALSIAIIDIDFFKRINDE 362 Query: 176 YGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDN 235 +GHL+GD VL+ +A + R+ + + R+GGEEF++++ EE A ++ + V+ Sbjct: 363 FGHLVGDKVLKMMAKEMKRVCRESDFLSRFGGEEFVLLLPQTTLEEGLTAVDKLRRHVET 422 Query: 236 HAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 + +N+TV+AGV++ E L+ + RAD A+Y K+ GRNR ++ Sbjct: 423 RPFHYQNTPVNLTVSAGVAQRQVNETLESWLDRADAALYVSKREGRNRVTKANQ 476 >UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KB78_CYAP7 Length = 547 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 78/287 (27%), Positives = 121/287 (42%), Gaps = 19/287 (6%) Query: 15 LNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRL 74 + A+ + + + ++ P + + Q ++ D + V+ Sbjct: 259 IQNALTSGGIYSDHLREHLIT-LQKDPSLGVAFKKIIAQENFVLEPTLAYKLDSMGLVKF 317 Query: 75 MDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVL 134 +D Q + N R L D F+ L+ T L +D L Sbjct: 318 VDQQWQPLCNLYRFYFLQQNLEQE-----DIFEPRLIKLTQE-----NKRLRKLVYLDEL 367 Query: 135 TGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYL 192 TG+ RR D + + R L LMLLDID FK NDTYGH +GD L+ +A + Sbjct: 368 TGIYNRRYFDHYLEREWRRMTREKAPLSLMLLDIDYFKNYNDTYGHQLGDACLKKVAQAI 427 Query: 193 ASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN---IT 248 R + V RYGGEEF II+ +++ A I + + + AI H +N +T Sbjct: 428 QKSLKRSTDIVARYGGEEFAIIISQCDNKGALFLAEIIREQIKSLAINHKNSQVNLKIVT 487 Query: 249 VTAGVSRAFP--EEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVI 293 + GV+ P E ++I AD A+Y+ K GRNR F + Q +I Sbjct: 488 ASIGVATIIPALETQPKMLIQMADEALYQSKHEGRNRVTFRNNQPLI 534 >UniRef50_C1SHV7 Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHV7_9BACT Length = 396 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 72/306 (23%), Positives = 117/306 (38%), Gaps = 26/306 (8%) Query: 6 TEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASK-PEITDNHSYGLCQFGRWIDHLGPL 64 D L A+ H L H V + + F ID + Sbjct: 89 KGFDEAQKTLLNALSDHIISLERRQHKVSNFIEDVFTKFVGLQAELTSSFSNSIDFVEED 148 Query: 65 DNDELPYVRLMDSAHQ--------------HMHNCGRELMLAIVENHWQDAHFDAFQEGL 110 + + + H+ + + + + + D + Sbjct: 149 LALDQKLLGDAEDMHKVLKSENSIEYLRTKMLESFSNFVDTFGSKTESKKGRLDTINKEY 208 Query: 111 LSFTAALTDYKIY---------LLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNL 159 + + L DYK S D LT L R+ +D ++ + Sbjct: 209 TTVNSELEDYKKQVSKLQNDLNKYKTESITDHLTSLYNRKYMDIKMTEEIDRYRRMNTSF 268 Query: 160 YLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAND 219 +ML+DID FK VND YGHLIGD VL+ LA L R + +RYGGEEF+I++ + Sbjct: 269 CIMLVDIDYFKNVNDNYGHLIGDQVLKHLAKLLKDSIRKTDFAFRYGGEEFLIMLTNVDV 328 Query: 220 EEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQT 279 A +I + + + E N+T + G++ ++ + VI RAD +Y+ KQT Sbjct: 329 RNATHVAEQIRKKLKETNFSLKENSFNVTASFGIALFEKDDTQESVIKRADERLYKAKQT 388 Query: 280 GRNRCM 285 GRN+ + Sbjct: 389 GRNKIV 394 >UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1M6_9DELT Length = 396 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 89/192 (46%), Gaps = 5/192 (2%) Query: 99 QDAHFDAFQEGLLSFTAALTDYKIYL-LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL 157 A + FQ A+ + ++Y + S D LTGL +L + Sbjct: 198 TKAELETFQTVSYQLGLAIDNARLYETVRRLSIYDPLTGLFNHGQFYNLLAEELSRHQRT 257 Query: 158 --NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVK 215 L L++LDID FK VNDTYGH GD VL+ L+ L R + V RYGGEE +I+ Sbjct: 258 GRPLSLLMLDIDHFKKVNDTYGHRAGDAVLQQLSGLLKKQARAIDRVCRYGGEELALILP 317 Query: 216 AANDEEACRAGVRICQLVDNHAITH-SEGHINITVTAGVSRAFPEE-PLDVVIGRADRAM 273 + E A + R+ + V+ + I +TV+ G + + ++ ADRA+ Sbjct: 318 ETDREAARQTAERLRRHVEKCCFATCGQQEIGVTVSIGAATCPDAAISAETLVNAADRAL 377 Query: 274 YEGKQTGRNRCM 285 Y K+ GRNR Sbjct: 378 YAAKRAGRNRVC 389 >UniRef50_B7K273 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Cyanobacteria RepID=B7K273_CYAP8 Length = 308 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 112/272 (41%), Gaps = 8/272 (2%) Query: 20 DAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAH 79 + + S+ ++ D PEI + +C+ + + + L + Sbjct: 42 KQALERVKSVKPDLILLDLMMPEI---NGLEVCKILKSDEATANIPILFLTASNDKEHLI 98 Query: 80 QHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPG 139 + + + + A E L + ++ D LTG+ Sbjct: 99 KAFEQGAVDYVTKPFKVPELLARVKTHVE--LKQVQKQLQEACQTMKKLADTDELTGIAN 156 Query: 140 RRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTR 197 RR L E + + + L+++D+D FK +ND YGH GD ++ + + R Sbjct: 157 RRCLLEFAQREFQRSLRYGTPFCLLMIDVDHFKNINDKYGHPNGDKAIQWVVEIIKLGLR 216 Query: 198 DYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAF 257 + + R+GGEEFI+++ A RI + + + +T + + +T + GV+ Sbjct: 217 EVDFFGRFGGEEFIVVLPQTALGGALEVAERIREAIASQPLTLEQDTVTLTASIGVATYT 276 Query: 258 PEE-PLDVVIGRADRAMYEGKQTGRNRCMFID 288 E+ + +I RAD+++Y+ K GRN+ + I Sbjct: 277 GEDKTVVGMIQRADKSLYQAKAKGRNQVIAIP 308 >UniRef50_A0LBU1 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LBU1_MAGSM Length = 438 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 5/177 (2%) Query: 117 LTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVND 174 L KI L + D LTG R L E F +++ +E + +++LDID FK VND Sbjct: 261 LIQRKINDLEKKVYHDPLTGAANRSRLYEKFHEEMKRSERYGSPVSILMLDIDHFKRVND 320 Query: 175 TYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVD 234 TYGH GD VL + + R + V R+GGEEF++I A I +L+ Sbjct: 321 TYGHNAGDEVLLEVVKRMQGHVRVTDLVGRWGGEEFLLIAPETVLGAALEVAENIRRLIG 380 Query: 235 NHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 +T + GV + E ++ + R D A+Y K+ GR+R D Sbjct: 381 QIPF---GQVGRVTCSIGVGQLAKGESMNTCLERVDAALYRAKKQGRDRVEMADPPP 434 >UniRef50_A6FD11 Sensory box/GGDEF family protein n=1 Tax=Moritella sp. PE36 RepID=A6FD11_9GAMM Length = 320 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 64/271 (23%), Positives = 105/271 (38%), Gaps = 19/271 (7%) Query: 24 QWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMH 83 WL S SV F W R + + M+ Sbjct: 66 AWLRSKIESVFL-------------LKNNAFTSW---EQRPYIFRFNNYRPVTGISEFMY 109 Query: 84 NCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVL 143 + LA + + ++ D L S D LT L R Sbjct: 110 QNMTIIPLASLTGEVTHVSLIIYDVTDIAINRLQLDKANAELARLSQTDALTQLNNRHRW 169 Query: 144 DESFDHQLRNAEPL-NLY-LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYET 201 + D + + + + M+LDID FK VNDTYGH+ GD V+ ++ + R+ + Sbjct: 170 NNLIDSEFKRVKRYEQISTFMMLDIDHFKNVNDTYGHVAGDKVIAEVSRVIRENVRETDF 229 Query: 202 VYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE-E 260 RYGG+EF I + A R+ Q ++N IT + +I +T++ G++ + Sbjct: 230 SARYGGDEFAICLTNTTAHNAIILADRLRQAIENTVITDDDNNIKVTISIGMAEFTENTD 289 Query: 261 PLDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 +D AD A+Y+GK+ GRN+ ++ Sbjct: 290 TVDTWTKNADCALYKGKENGRNQYSIFKPRS 320 >UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6I5_BREBN Length = 530 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 7/223 (3%) Query: 69 LPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIR 128 + S + GR+ + + E + F K LT Sbjct: 314 RKIAKPFVSLANLVSKAGRQ-EVELSEGSQHWNREAELLSRAIRFALTNIKKKTEQLTHD 372 Query: 129 SNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTL 188 + D LTGL RR L+E+ + AE + +M++D+DRFK +NDTYGH GD VLR Sbjct: 373 ARTDPLTGLTNRRTLEETMQKWM--AEQIPFSIMMMDLDRFKAINDTYGHQAGDEVLRHF 430 Query: 189 ATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINIT 248 A ++S R + R+GGEEF+++V EEA + RI + ++ + +T Sbjct: 431 AKIISSSLRPEDVSCRFGGEEFVVLVSHTGLEEAYQVAERIRRALETRTNPIGQ---RLT 487 Query: 249 VTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 V+ G++ + ++ AD AMY+ K+ GRN+ M +E+ Sbjct: 488 VSQGIAHYPSHAVSPEGLLHVADEAMYKAKRAGRNQTMIAEEE 530 >UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U4U5_MARAV Length = 571 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 4/197 (2%) Query: 98 WQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDH--QLRNAE 155 +A AF K L +++ D LT L RR ++ + Sbjct: 368 VLEALTLAFIISYRIKVLEDIRSKQDELKRQASTDPLTRLFNRRYFMAEGEYVLEQARTS 427 Query: 156 PLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVK 215 L ++ +DID FK VNDT+GH +GD+VL +A+ ++RD + V R+GGEEF+I++ Sbjct: 428 GEPLSVIAIDIDHFKAVNDTHGHNVGDLVLVEVASVFRQFSRDRDLVARFGGEEFVILLP 487 Query: 216 AANDEEACRAGVRICQLVDNHAITHSEG-HINITVTAGVSRAFP-EEPLDVVIGRADRAM 273 A+ E RI V+ I +G + +TV+ GV+ P E ++ + RADR++ Sbjct: 488 GADLTEGFGCAERIRNAVEAMVIDGGDGLAVRVTVSVGVAEVNPLLESVEGAVKRADRSL 547 Query: 274 YEGKQTGRNRCMFIDEQ 290 YE K GRNR D Sbjct: 548 YEAKAGGRNRVCGFDGP 564 >UniRef50_B2V7F9 Diguanylate cyclase n=2 Tax=Sulfurihydrogenibium RepID=B2V7F9_SULSY Length = 427 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 64/277 (23%), Positives = 131/277 (47%), Gaps = 10/277 (3%) Query: 12 LLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPY 71 +L++ K I+ H + + + + S C+F +W+ + Sbjct: 152 VLSVEKGINIHLKIKNKLLRFLFSGKNH----VKIKSAEDCEFTQWLRDSLTNLVNNKNI 207 Query: 72 VRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNM 131 ++ ++S H+ H ++++ + +N + ++ L L L+ + Sbjct: 208 IKEIESLHEKFHLMAQKILES-KDNFTKILLLKDLEDNSLKLIYLLNKIYTENLSHIAIY 266 Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LT + R +LD + A+ + +++LDID FK +NDTYGHL GD VL+T+A Sbjct: 267 DKLTQVYNRALLDSILYKSAKYAKRHKLPISIIMLDIDNFKGINDTYGHLEGDRVLKTVA 326 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + + R+ + V+RYGGEEF+I++ + A G +I + ++N +T+ Sbjct: 327 SIIKYSIRESDYVFRYGGEEFLILLPNTDINGAIVVGEKIRRNIENFDFGLDR---KVTI 383 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + G+ + + + + D+ +Y K++G+NRC++ Sbjct: 384 SCGIKQIENFDNPYLDMEETDKYLYIAKKSGKNRCIY 420 >UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVG8_9CYAN Length = 329 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 11/226 (4%) Query: 76 DSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSF--TAALTDYKIYLLTIRSNMDV 133 +H+ ++ + + + A L T + K ++ D Sbjct: 90 SEEKEHLLEAFKQGAVDYITKPFYAPELLARVRVHLELKYTKDELNKKSAAFEKQAITDP 149 Query: 134 LTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATY 191 LTG+ RR L + + + A N +++LDID FK VNDTYGH++GD VL+ + Sbjct: 150 LTGIFNRRHLMSISEIEYQKAVNYNRLFSIIMLDIDHFKKVNDTYGHIVGDQVLKRMTQE 209 Query: 192 LASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG------HI 245 + + R+ + R+GGEEF II+ A+ + A + R+ Q + + I + I Sbjct: 210 VQNLLREGDVCGRFGGEEFAIILPGADLKIALKIAERLRQAIADFYIPIYDSNSSSNLKI 269 Query: 246 NITVTAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRNRCMFIDEQ 290 IT++ GV+ ++ LD + RAD A+Y+ K GRN+ I E Sbjct: 270 KITISLGVTTYHIDDDKLDKMWRRADDALYQAKAKGRNQVCSIYEP 315 >UniRef50_B3E3B5 Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E3B5_GEOLS Length = 669 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 91/183 (49%), Gaps = 7/183 (3%) Query: 109 GLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLL 164 ++ A + K LL + +D LTG+ RR+ D + A L L++L Sbjct: 490 EIIDSRRAQQELKHANELLATEARIDFLTGIYNRRMFDGLLVAETARACRYNSPLSLIML 549 Query: 165 DIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACR 224 D+D FK +NDT GH GD VL+ +A ++ R ++ R+GGEEF+I+ + +A Sbjct: 550 DLDHFKQINDTQGHAAGDHVLQKVAELISGRIRSHDIFSRWGGEEFVILTPKNDTAQAAV 609 Query: 225 AGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + +++ + + +T + GV+R EP +V I RAD A+Y+ K GRNR Sbjct: 610 LAEILRDMIEQYDF---GNGLRLTCSFGVTRHICGEPAEVFIERADTALYQAKHNGRNRV 666 Query: 285 MFI 287 Sbjct: 667 ETA 669 >UniRef50_B0CDD6 Diguanylate cyclase (GGDEF domain) n=2 Tax=Bacteria RepID=B0CDD6_ACAM1 Length = 630 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 87/212 (41%), Gaps = 16/212 (7%) Query: 90 MLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL---------LTIRSNMDVLTGLPGR 140 ++ A + L + + L S +D LT + R Sbjct: 418 IINADLEDKVRERTQALYDRNLQLQQEIEERHRAEAKLKQLNQQLQQLSRIDGLTSIHNR 477 Query: 141 RVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-R 197 R DES D + R L ++L D+D FK NDTYGH GD L+ +A + R Sbjct: 478 RSFDESLDKEWRRLRREQQPLSIILCDVDHFKQYNDTYGHQAGDTCLQEVALAIDKSVKR 537 Query: 198 DYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI--NITVTAGVSR 255 + V RYGGEEF++++ A I ++ I H +T++ GV+ Sbjct: 538 PADMVARYGGEEFVVLLPNTPLPGATHIAEMIRTAIEVLRIPHKTSSASDQVTLSLGVAT 597 Query: 256 AFPE--EPLDVVIGRADRAMYEGKQTGRNRCM 285 P + ++ AD A+Y KQ GRNR + Sbjct: 598 VIPNTQQTYTELLEAADAALYRAKQQGRNRVI 629 >UniRef50_Q2BQL8 Probable two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQL8_9GAMM Length = 505 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 116/295 (39%), Gaps = 19/295 (6%) Query: 5 TTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEI--TDNHSYGLCQFGRWIDHLG 62 +I ++ L + +++A D + T+ + + I Sbjct: 216 IEKIWPMIATLRNEFNILLPSSKGELTTLLAEDQPDLLLLCTEQQWQEMLSLCQEITANK 275 Query: 63 PLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKI 122 + +V + + A + L S L K Sbjct: 276 DDYTLPVAFVSADLDDQRELD--------AYNAGAADFLTLNRAPAVLQSRIQILMQLKQ 327 Query: 123 --YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGH 178 L + +D LT + RR + + + + R A+ +L L++LDID FK ND YGH Sbjct: 328 SQDQLARSARVDGLTQVNNRREFERNIEMEWRRAQRSKRSLALIMLDIDHFKPFNDGYGH 387 Query: 179 LIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHA 237 L GD LRT+A + R + V RYGGEEF++I+ + + A RI + + Sbjct: 388 LAGDGCLRTVAQTIKHSIQRAQDMVCRYGGEEFVVILPETDLDGAQMIAERIRKAIAKLK 447 Query: 238 ITHSEGHI--NITVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQTGRNRCMFID 288 I H IT++AGV+ P + +I AD+ +Y+ K GRN+ + Sbjct: 448 INHEFSSTDNTITISAGVACLSPSQEGSPHELILLADQGLYQAKAQGRNQVAIVQ 502 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 7/196 (3%) Query: 102 HFDAFQEGLLSFTAALTDY--KIYLLTIRSNMDVLTGLPGRRVLDESFDHQL--RNAEPL 157 + + +S + +T + L ++ D LTGL RR + + + + Sbjct: 266 NLEGTITHYVSISQDVTTRLGREQKLLEIAHSDPLTGLNNRRAAEHTLERLIDTARISGK 325 Query: 158 NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAA 217 L++ DID FK VND YGH GD VL ++A L R + R+GGEEF+I+V + Sbjct: 326 PFSLIIGDIDHFKSVNDRYGHPAGDRVLTSVAVILKQRIRLQDVAARWGGEEFLILVPDS 385 Query: 218 NDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGK 277 + + A RI + V++ I ++ ++T++ GV++ P E +I RAD+A+Y+ K Sbjct: 386 SLDHAAELADRIRKGVEDLLIPNTG---SVTISLGVAQLSPGETAASLIQRADKALYQAK 442 Query: 278 QTGRNRCMFIDEQNVI 293 + GRNR + I Sbjct: 443 RRGRNRVDIAQADDTI 458 >UniRef50_A0YZR1 Putative diguanylate cyclase (GGDEF domain) n=2 Tax=Cyanobacteria RepID=A0YZR1_9CYAN Length = 328 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 8/207 (3%) Query: 87 RELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDES 146 R+ + I++ W E + T L + L + +D LT + RR D+ Sbjct: 121 RQRIRRILQTQWAMKELKKQIERSRTLTEQL-ETANQKLEQIAALDSLTQIANRRRFDQG 179 Query: 147 FDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVY 203 + + E L L L+L D+D FK NDTYGH GD+ L+ +A + R + V Sbjct: 180 LHSEWKRLSRERLPLSLILCDVDFFKAYNDTYGHRAGDLCLQQVAQTICEKVQRPADLVA 239 Query: 204 RYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN--ITVTAGVSRAFPEE- 260 RYGGEEF II+ + A + I + I H ++ +T++ GV+ P Sbjct: 240 RYGGEEFAIILPNTQLQGAVKVAEDIRHSLHAIEIEHPNSRVSNFVTLSLGVASLIPNHY 299 Query: 261 -PLDVVIGRADRAMYEGKQTGRNRCMF 286 D +IG ADRA+YE K+ GR+R +F Sbjct: 300 LSEDFLIGEADRALYEAKKAGRDRVVF 326 >UniRef50_A0YNV2 Regulatory component of sensory transduction system n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YNV2_9CYAN Length = 456 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 69/243 (28%), Positives = 106/243 (43%), Gaps = 16/243 (6%) Query: 61 LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVE-NHWQDAHFDAFQEGLLSFTAALTD 119 G LD + + H R+L E W + +G+L +T+ Sbjct: 211 KGSLDIFDSSLFEYFIKVVKTRHPFERDLYYETPEITAWYSVKAIPYGQGILIIVRDITE 270 Query: 120 YKIYLL---------TIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDR 168 K L ++ D LT + RR D + + A+ L+L LM++DID Sbjct: 271 RKQCELVLHETNSILYQQAITDNLTKISNRRAFDVYLKQEWKRAKREALSLALMMIDIDY 330 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGV 227 FK ND YGH GD L T+A + R + V RYGGEEF +I+ E A Sbjct: 331 FKRYNDHYGHEAGDRCLYTVAQTIRQAVKRPSDFVARYGGEEFAVILPNTEREGAETVAD 390 Query: 228 RICQLVDNHAITHSEGHIN--ITVTAGVS-RAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 I + + + + H++ I+ IT++ G+S + E ++I AD A+YE K GR+R Sbjct: 391 SIQKAIHDFKLPHAQSPISSCITLSIGISIQIPTSEDFTILIQTADHALYEAKHQGRDRI 450 Query: 285 MFI 287 Sbjct: 451 QVY 453 >UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=2 Tax=Desulfovibrio RepID=B8DIR5_DESVM Length = 474 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 5/184 (2%) Query: 105 AFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLM 162 A G++ + +L + D LT LP R L+E F ++ A+ ++ Sbjct: 293 ALLVGVVLWYNRRLKRMNAVLERLARTDPLTDLPNRSRLNELFRREVERAQRYRRPFSIV 352 Query: 163 LLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEA 222 +LDID FK VND GHL GD L+ A + R +TV R+GGEEF+++ EEA Sbjct: 353 ILDIDHFKRVNDELGHLAGDRTLQVFAGVVRDSVRGTDTVGRWGGEEFLVLCPETTAEEA 412 Query: 223 CRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 + R+ + G I+ T++AGV+ + +D ++ RAD A+Y K GR+ Sbjct: 413 VQLAERLRGSLRATQF--EGGRIH-TLSAGVAAFREGDSVDTLLHRADTALYRAKNGGRD 469 Query: 283 RCMF 286 R Sbjct: 470 RVEV 473 >UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clostridium thermocellum RepID=A3DEY5_CLOTH Length = 550 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 4/207 (1%) Query: 84 NCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYL-LTIRSNMDVLTGLPGRRV 142 G L+ N + D + A+ + ++Y + + +D LTG+ R Sbjct: 342 KFGLVLIEHKYFNAFDDNNLRLLNIIGQQVGIAMENVELYQRMHEMATIDSLTGIYNRLY 401 Query: 143 LDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYE 200 E + NA+ +L L ++DID FK NDT+GHL GD VL+ +A + R + Sbjct: 402 FQERLREEFANAKKENYDLSLAIMDIDHFKRFNDTFGHLFGDKVLKHIAHLMKKSLRSGD 461 Query: 201 TVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE 260 + RYGGEEF+I++ + +EA R+ +V I ++TV+ GVS Sbjct: 462 IIARYGGEEFVILLPRTSVKEAYDKVERLRNIVAKTTIKDELVEASVTVSFGVSSYPEFA 521 Query: 261 PLD-VVIGRADRAMYEGKQTGRNRCMF 286 + ++ AD A+Y+ K++GRN Sbjct: 522 NTESELLKTADNALYDAKESGRNCVRI 548 >UniRef50_A1VD57 Diguanylate cyclase n=3 Tax=Desulfovibrio vulgaris RepID=A1VD57_DESVV Length = 487 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 7/202 (3%) Query: 100 DAHFDAFQEGLLSFTAALTDYKI-YLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL- 157 A + T AL + + + ++++ D LT L RR D ++ + Sbjct: 283 KDQAQALDSVMRHLTLALRNAVVYREIKLQADHDALTQLHNRRSFDHRLAEEVDRHQRYG 342 Query: 158 -NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKA 216 + L++LDID FK VNDTYGH GD VLR +A + + R + RYGGEEF +I+ Sbjct: 343 MPMTLLMLDIDHFKAVNDTYGHPAGDAVLREVAQTMRNACRTTDFAARYGGEEFCVILPH 402 Query: 217 ANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE--PLDVVIGRADRAMY 274 + + R+ + + + + I +TV+ G++ + ++ AD A+Y Sbjct: 403 TDGKCGRIFAERLRKRLASSRVEVDGKTIAVTVSIGLATLSAAAPLSPERLVCEADGALY 462 Query: 275 EGKQTGRNRCMFIDEQNVINRV 296 K GRN E R Sbjct: 463 AAKAAGRNIVCEAQEP--CQRA 482 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 5/231 (2%) Query: 64 LDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIY 123 + +D P G + + +A +L + K+ Sbjct: 1111 IHSDSSPLESFCVPMMAQGKALGILYISSPQLGQLTEAKQRLALTVAEHLALSLANLKLR 1170 Query: 124 L-LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLI 180 L+ +S D LTGL RR ++ES + ++ A+ + +++LDID FK NDT+GH Sbjct: 1171 ETLSQQSIRDALTGLFNRRYMEESLEREIHRAQRHQRPMGIIMLDIDHFKHFNDTFGHEA 1230 Query: 181 GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH 240 GD VLR L +L R + RYGGEE ++I+ A+ + + +I V I + Sbjct: 1231 GDAVLRELGIFLQRSIRASDIACRYGGEELMLILPDASLADTKQRAEQIRHDVKGLQIEY 1290 Query: 241 SEGHI-NITVTAGVSRA-FPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 + I ++ GV+ +I ADRA+Y+ K GR+R + Sbjct: 1291 HHKLLDAIAISVGVAAFAEHGSTAQELIAAADRALYQAKAQGRDRVVTASS 1341 >UniRef50_A4CF43 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CF43_9GAMM Length = 603 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 25/290 (8%) Query: 23 YQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHM 82 +W++ S + I + + L + + + L Y+ ++ + Sbjct: 311 SKWILLSQLSYLVAIIFSIFIFNGKDHNLVSMSTLFMNSFFISSMVLSYLLILQFIDRRD 370 Query: 83 HNCGRELMLAIVENHWQDAHFDAFQEGL----------------LSFTAALTDYKIYLLT 126 R+ L + + + L T + K L Sbjct: 371 LKIQRQQALLAEAKIKDNLQLETIKIQQELEEELESRIQEHTFELQITLQELEEKNRELE 430 Query: 127 IRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVV 184 ++ +D LTG+ R D+ + R + L +M+LDID FK +NDT+GHL GD Sbjct: 431 EKNTLDSLTGIRNRSYFDKKLTMEFRRSHREQTPLAVMMLDIDFFKKINDTFGHLAGDDA 490 Query: 185 LRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEG 243 +R +A + + R + V RYGGEEF +I+ + E A I + + + G Sbjct: 491 IRFVAHTIQTSLKRPSDEVCRYGGEEFAVILPNTDTEGALLVAEAIRAQISEAQVHTTAG 550 Query: 244 HINITVTAG----VSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 IN+T++ G +++ E + AD+A+Y+ K GRN+ +F D+ Sbjct: 551 IINMTISVGLFSDIAQRNHEPNQYTAL--ADKALYQAKHAGRNQVVFYDD 598 >UniRef50_Q2W1M0 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W1M0_MAGSA Length = 477 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 7/181 (3%) Query: 111 LSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDI 166 + +T+ K L + D LTG RR + + +L A + ++++DI Sbjct: 295 IGIVTDITERKHMESQLRHLATTDELTGCLNRRAFFVAAEQELERASRYGNAVSVLMIDI 354 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAG 226 D FK VND +GH +GD L+ + + R+ ++ R GGEEF ++ A Sbjct: 355 DHFKQVNDRHGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAGALLVA 414 Query: 227 VRICQLVDNHAITHSEG--HINITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNR 283 R+ Q V+ A+ + + +T + GV+ P E +D V+ RAD A+Y K GRNR Sbjct: 415 ERLRQAVEAIALPLGDDQPPLRLTTSLGVAERQPGEVAVDQVLARADTALYRAKAEGRNR 474 Query: 284 C 284 Sbjct: 475 V 475 >UniRef50_A1K7E0 GGDEF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K7E0_AZOSB Length = 471 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 55/190 (28%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 106 FQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLML 163 ++ AL L + D LTG RR + + A L L+ Sbjct: 284 VEKERAESALALLRQANADLRRLAATDPLTGASNRRQFMATLASEWARARRERAPLALLA 343 Query: 164 LDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEAC 223 LDID FK +ND +GH GD L+T + A R + + R GGEEF I++ +A Sbjct: 344 LDIDHFKHINDRHGHPAGDHALKTFVSAAAGLLRPGDVIGRIGGEEFAIVLPGTQAADAH 403 Query: 224 RAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEP-LDVVIGRADRAMYEGKQTGRN 282 RI V+ A+ + +TV+ GV+ + P ++ ADR +YE K GRN Sbjct: 404 GIAERIRHGVEALALDIDGVPVALTVSVGVAVSGPSCTEPGDLLKEADRRLYEAKNAGRN 463 Query: 283 RCMFIDEQNV 292 R Sbjct: 464 RVC--PPPPA 471 >UniRef50_A8ESJ8 GGDEF domain protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ESJ8_ARCB4 Length = 433 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 71/286 (24%), Positives = 129/286 (45%), Gaps = 16/286 (5%) Query: 13 LNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYV 72 N+ H +WL + ++V D I ++ LC FG+W+D G Sbjct: 151 SNIIYYYKMHLEWLEDLAKAIVLADI---NIFPEINHNLCTFGKWLDKEGLEIIKNSSKY 207 Query: 73 RLMDSAHQHMHNCGRELMLAIVE----NHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIR 128 + + H+++H +++ ++E NH + + + LS L L+ Sbjct: 208 KNISKLHENLHFFAKQIKNCLIETQGNNHIILIYLEKCEMISLSLGTELALIDNTLINSE 267 Query: 129 SNMDVLTGLPGRRVLDESFDH--QLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLR 186 ++ D LTG R+ L + + + ++ A + + D D FK +NDT+GHL GD +L+ Sbjct: 268 ASKDPLTGALNRQRLSQLYQNQLEISFATFEPFVIAMCDFDHFKNINDTFGHLAGDKMLK 327 Query: 187 TLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN 246 + R + + RYGGEEF+II+ A N ++A +I + + N + I+ Sbjct: 328 SFVHIAKKHLRTSDIIIRYGGEEFMIILPAINTKKAKDILNKIREDIANFVLNLDGNKIS 387 Query: 247 ITVTAGVSRAFPE-------EPLDVVIGRADRAMYEGKQTGRNRCM 285 T++ G+ +PE + + I D+ +YE K +GRN Sbjct: 388 ATISIGMIEIYPENGNNSYFKDFENTISLVDKKLYEAKNSGRNTIC 433 >UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XPG9_DESMR Length = 368 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 6/186 (3%) Query: 110 LLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQL--RNAEPLNLYLMLLD 165 ++ T ++ K L + D LTGL RR E L L +++LD Sbjct: 175 VVGMTQDISARKALEEELLRLAASDPLTGLANRRGFFEGAARMLGMARRCGTPLSMIMLD 234 Query: 166 IDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRA 225 ID FK VND YGH GD VLR +A L R + R GGEEF ++ + Sbjct: 235 IDHFKAVNDAYGHDAGDAVLRAVAGRLRESLRVSDLAGRVGGEEFAVLCPGTDLAGGVEL 294 Query: 226 GVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEP--LDVVIGRADRAMYEGKQTGRNR 283 R+ +++ +T + +T + GV++ + + RADRA+Y K+ GRNR Sbjct: 295 AERLRLALEDMVVTADCRAVKVTASFGVAQCRDDRDAAPSACLTRADRALYAAKRGGRNR 354 Query: 284 CMFIDE 289 + Sbjct: 355 VCLESD 360 >UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZW4_HYPNA Length = 455 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 5/175 (2%) Query: 116 ALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVN 173 + ++ S +D LTGL RR ++ + ++ A L LM+ DID FK VN Sbjct: 277 DILRQRVDRGLELSVIDQLTGLHNRRYMNGQLEQFMQRAARGNQPLSLMMTDIDHFKAVN 336 Query: 174 DTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLV 233 DT+GH GD VLR + L + R + V R GGEEF++++ + AC A RI + V Sbjct: 337 DTHGHQAGDDVLREIGKRLRANVRPTDVVCRTGGEEFVVLMPNTPGDLACAAAERIRKAV 396 Query: 234 DNHAITHSEGH--INITVTAGVSRAFP-EEPLDVVIGRADRAMYEGKQTGRNRCM 285 G + ITV+AGVS + D ++ RAD A+Y+ K GRNR Sbjct: 397 AAEEFPVLGGSQNLRITVSAGVSTLQGAGDTTDDLMHRADTALYQAKTGGRNRVE 451 >UniRef50_A9B3D1 Diguanylate cyclase n=2 Tax=Bacteria RepID=A9B3D1_HERA2 Length = 1774 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 3/167 (1%) Query: 124 LLTIRSNMDVLTGLPGRRVLDESFDHQLRN--AEPLNLYLMLLDIDRFKLVNDTYGHLIG 181 + + D LT + RR E + Q + L M+LD+D FK VND+YGH +G Sbjct: 1608 QVQRLAITDSLTQVSNRRHFFELAERQWILTCSSDHPLSAMMLDVDHFKRVNDSYGHSVG 1667 Query: 182 DVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHS 241 D+VLRT+A + R + + RYGGEEF I++ + A R+ + NH I H Sbjct: 1668 DLVLRTVADLCRANLRPSDLLGRYGGEEFAILLPDTDVSAALTIAERLRVAIANHVINHE 1727 Query: 242 EGHINITVTAGVSRAFPEE-PLDVVIGRADRAMYEGKQTGRNRCMFI 287 + IN+TV+ GV+ ++ + ++ RADR +Y K+TGR+R Sbjct: 1728 QASINLTVSIGVTGLSKDDNSVASLLDRADRGLYIAKETGRDRVTMA 1774 >UniRef50_Q2BQN9 Diguanylate cyclase, putative n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQN9_9GAMM Length = 529 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 63/285 (22%), Positives = 122/285 (42%), Gaps = 7/285 (2%) Query: 4 KTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGP 63 + + + L+ L+ ++ ++V S+ ++ + + + + Sbjct: 245 TSEDFENYLIELSSRLNEVQTFVVDSRQEQAEIGQSQKDLDLQVRRDVKKLHLTVKNTHE 304 Query: 64 LDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYK-- 121 + + + + + + M + ++ ++ + K Sbjct: 305 IGDLKKAVSQQLSGLVKAMDSFKKK---EEQREQRLQGRYEDLIGKVEQMEEETRKVKAH 361 Query: 122 IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHL 179 + +R+ D LTGLP R DE + + +++ D+D FK +NDTYGHL Sbjct: 362 MEEERLRARTDPLTGLPNRAAYDEQIAQEYERWSRYRTSFSVVVADLDFFKKINDTYGHL 421 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 GD VLR +A + R + V RYGGEEF+I++ + EEA +A ++ + + + Sbjct: 422 AGDKVLRLVAKVITKNIRVTDFVARYGGEEFVILLPSTVAEEAAQAMDKLRESLASSPFN 481 Query: 240 HSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRC 284 + IT++ GV+ + LD V RAD A+Y+ K+ GRN Sbjct: 482 FHGKPVGITMSFGVTEIKEGDSLDDVFTRADEALYQAKEDGRNLV 526 >UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0Y0_9NEIS Length = 528 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 4/181 (2%) Query: 112 SFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRF 169 L + L + D LTGLP RR L+E+ + QL+ + L+LLDID F Sbjct: 338 RLVNELAEA-NSKLAHLARTDTLTGLPNRRALEEALEQQLQRSRRNGEQASLVLLDIDHF 396 Query: 170 KLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRI 229 K+VND YGH GD V+R L ++ R+ + R+GGEEF++++ ++E A R+ Sbjct: 397 KVVNDRYGHDAGDAVIRALGKAMSETIRNVDVAGRWGGEEFLVVLANVDEEGAAAFAERL 456 Query: 230 CQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 V++ + H E H+ T++ GV+ + + RAD A+Y K GRNR Sbjct: 457 RTRVESSTVAHGELHVRYTISLGVAPLS-TPHREAWLKRADEALYRAKLDGRNRTAIAQA 515 Query: 290 Q 290 + Sbjct: 516 R 516 >UniRef50_Q5SHT9 GGDEF domain protein n=2 Tax=Thermus thermophilus RepID=Q5SHT9_THET8 Length = 360 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 69/270 (25%), Positives = 115/270 (42%), Gaps = 13/270 (4%) Query: 29 MFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRE 88 + + + + + GL W+ P R A ++ Sbjct: 93 LIALYLLSTLTYQLLFKPNPLGLSPAAYWVPFFYFSSYLFFPAKRAARLALLYLLTLFPV 152 Query: 89 LMLAIVENHWQDAHFDAFQE------GLLSFTAALTDYKIYLLTIR--SNMDVLTGLPGR 140 +L ++ N +Q H++A + + L K + + + D LTGL R Sbjct: 153 ALLGLMRNPFQPVHWNALTQFFGANLAYVGLLYLLVRLKEGYMEAQLDAYTDFLTGLRNR 212 Query: 141 RVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRD 198 R L+ + +L + L L+LLD+D FK VND +GH +GD VL+ LA + + R Sbjct: 213 RYLELILERELFRLQRYGRPLSLVLLDLDGFKAVNDLHGHEVGDRVLQALAQRIEAHLRR 272 Query: 199 YETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFP 258 + R GGEEF +++ +A R R+ + V+ A+ IT + GV+ A P Sbjct: 273 SDRAVRLGGEEFALLLPETPLPQALRLAERLRRAVEAMAVPPVA---RITASFGVAEARP 329 Query: 259 EEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + ++ RAD AMY K+ G+NR Sbjct: 330 TDTPLTLLRRADEAMYRAKRKGKNRVEAAP 359 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 5/204 (2%) Query: 94 VENHWQDAHFDAFQEGLLSFTAALTDYKIYL-LTIRSNMDVLTGLPGRRVLDESFDHQLR 152 + Q +L + ++ L +S D LTGL RR L+E+F +L Sbjct: 347 ETGEALELARPLAQRFAERVALSLVNLRLRATLRQQSIRDPLTGLYNRRYLEETFTRELA 406 Query: 153 N--AEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEF 210 L L+++D+D FK NDTYGH +GD +LR LAT+L + R + V RYGGEEF Sbjct: 407 RVQRRRQPLSLLMIDVDHFKQHNDTYGHALGDTLLRRLATHLQRFFRTEDIVCRYGGEEF 466 Query: 211 IIIVKAANDEEACRAGVRICQLVDNHAITHSEGH-INITVTAGVSRA-FPEEPLDVVIGR 268 ++++ + +A + + V+N A+T ++ + +T++ G + + ++ R Sbjct: 467 VVLLPECDAPQAQARAEALRRSVENLAVTSNDAEFVALTISIGGASWPDHATTPEDLLAR 526 Query: 269 ADRAMYEGKQTGRNRCMFIDEQNV 292 AD A+Y K GRNR F Sbjct: 527 ADAALYRAKHRGRNRVEFEPIPGA 550 >UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM4_PSYIN Length = 1078 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 7/184 (3%) Query: 107 QEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLM 162 + ++ F +T+ K + + + D LTG+ RR +L + L L+ Sbjct: 897 RTIMVGFFHDVTERKKVEEEIKLLATTDSLTGIANRRAFSTHLASELERSNRYGTPLSLV 956 Query: 163 LLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEA 222 + DID FK VND +GH GD VL+ L+ + R + V R+GGEEF++++ ++ A Sbjct: 957 MFDIDYFKKVNDNFGHDAGDDVLQALSELVKRNIRAVDIVARWGGEEFMLLMPESDISAA 1016 Query: 223 CRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 A ++ + + + ++TV+ G++ E V + R D A+Y+ K+ GRN Sbjct: 1017 TAAIEKLRREISDFPF---GQVGSLTVSFGITVFVLNEDSKVFLKRVDDALYQAKEKGRN 1073 Query: 283 RCMF 286 R Sbjct: 1074 RVEI 1077 >UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=Cystobacterineae RepID=Q1D095_MYXXD Length = 347 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 15/210 (7%) Query: 90 MLAIVENHWQDAHFDAFQEGLLSFTAALTDY------KIYLLTIRSNMDVLTGLPGRRVL 143 ML + A Q+ L+ L + L + D LTGL RR Sbjct: 133 MLELSARVKSMLRLKALQDALVEKNRELDRANKELAARREELLALTRTDALTGLSNRRAF 192 Query: 144 DESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYET 201 +E + + + L L++LDID FK +ND++GH GD VL+ +A + R+ + Sbjct: 193 EERLNDEFARSRRYGAPLSLVMLDIDHFKRINDSFGHPFGDHVLKAVAQTARARLREVDL 252 Query: 202 VYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH-----INITVTAGVSRA 256 + RYGGEEFI ++ +A R R+ + + H G + +T + GV+ Sbjct: 253 LARYGGEEFIALLPETGPADALRVCERVRDAIAALELEHVGGSGKPQCVRLTASLGVATV 312 Query: 257 FPEE--PLDVVIGRADRAMYEGKQTGRNRC 284 + + ++ AD ++Y K GRNR Sbjct: 313 PSGDLPSAEALLRAADASLYAAKGAGRNRV 342 >UniRef50_D1AZG2 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZG2_SULD5 Length = 768 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 9/215 (4%) Query: 74 LMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDV 133 + ++ H G + + D + G + +TD K + S D Sbjct: 552 IWRGELKNRHKDGSAYWVETIIAPRYDEDYSLI--GYTAIRTDITDKK--RVEELSITDR 607 Query: 134 LTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATY 191 LTGL R LDE F H L A ++LLDID+FK VNDTYGH +GD +L+ A Sbjct: 608 LTGLYNRLKLDELFAHHLSIARRHHTPFSIILLDIDKFKSVNDTYGHQVGDTILQEFALC 667 Query: 192 LASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTA 251 + + R + R+GGEEF++++ + E A ++ V + + + T + Sbjct: 668 VKAQIRSEDIFGRWGGEEFLLLLPNSPLENASLLAEKLRLCVASFSFSQVGMK---TASF 724 Query: 252 GVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 GV+ + ++ R D A+Y K+ GRN+ + Sbjct: 725 GVATFHEGDDEKSMMVRVDEALYRAKENGRNQVVL 759 >UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WZN3_9GAMM Length = 395 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 8/192 (4%) Query: 106 FQEGLLSFTAALTDY---KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LY 160 F G+L+ + L + + + D LTGL RR L + F H++ A L Sbjct: 196 FVAGVLTLVSLLLRRWVYREAQVRAMAVQDPLTGLSNRRALFDQFAHEMARARRTGEALS 255 Query: 161 LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDE 220 + ++D+D FK +ND +GH GD VL +A L R+ + + R GGEEF++++ E Sbjct: 256 VCVMDLDHFKQINDRHGHAAGDTVLVRVANLLRECLRETDRIGRIGGEEFVLVLPDTGHE 315 Query: 221 EACRAGVRICQLVDNHAITHS-EGHINITVTAGVSRAFPEE--PLDVVIGRADRAMYEGK 277 A + R + + + ++ + GV A E ++ RAD A+Y K Sbjct: 316 GAEKVIERCRAALVGTPVMLDVGEPLTVSASFGVVTALAGEQATESQLVSRADDALYLAK 375 Query: 278 QTGRNRCMFIDE 289 + GRNR F Sbjct: 376 KRGRNRVEFWSS 387 >UniRef50_Q6ARR6 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ARR6_DESPS Length = 440 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 124/262 (47%), Gaps = 11/262 (4%) Query: 35 ARDASKPEITDNHSY-GLCQFGRWIDHLGPLDND-----ELPYVRLMDSAHQHMHNCGRE 88 + + EI S+ L + WI G +D E ++ + +H +N Sbjct: 181 FKKINSEEIAHKLSFAKLYKPYDWIIASGVYLDDVDQLIESETRKMRRTYERHKNNSFSI 240 Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFD 148 +LA++ + F+ L+ + L + S D LTGL R LD+ F Sbjct: 241 SLLALLLSVAVMVFFERQISRLMLSYEDEIEIYTSRLELFSITDSLTGLYNRFRLDDVFL 300 Query: 149 HQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 +++ A+ ++ L+LLD+D+FK VND +GH +GD V+R +A L TR +TV R+G Sbjct: 301 YEVEQAQRYKRSVSLILLDLDKFKSVNDNHGHQVGDQVIREIARILKESTRVVDTVGRWG 360 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVI 266 GEEF++I E A +I V+ + ++T + GVS P + +I Sbjct: 361 GEEFLVICAETTLEGAGILADKIRVSVEENDFPVVG---SVTCSFGVSSFHPGDNEASMI 417 Query: 267 GRADRAMYEGKQTGRNRCMFID 288 RAD A+Y K+ GRNR F + Sbjct: 418 CRADVALYFAKENGRNRVCFEE 439 >UniRef50_Q30WR5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WR5_DESDG Length = 361 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 8/242 (3%) Query: 60 HLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTD 119 H+ + ++ + + + E +N + L L Sbjct: 102 HITNIFSELIHMLNEQGVLLRATQKKAAEARSTGSDNVQLLEDYMIINNELSRNKRELAI 161 Query: 120 YKIYL------LTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKL 171 L + S D LTG RR + E ++ ++ L ++ LDIDRFK Sbjct: 162 RHEQLKKAFSDIEELSRTDPLTGACNRRKVIEFLSAEIDRSKRYGTPLSILSLDIDRFKA 221 Query: 172 VNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQ 231 +NDTYGH GD L R + R GGEEF+ ++ A +A + RI + Sbjct: 222 INDTYGHAAGDDALIAFCRVCRQQLRKTDLFGRTGGEEFVAVLPHAACRDAQISAERIRR 281 Query: 232 LVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQN 291 V+ IT++ + TV+ G++ E D ++ RAD A+Y K GRN ++ Sbjct: 282 HVEQIHITYNNACVRFTVSIGIAVHEAGENTDTLLRRADAALYRAKTAGRNTVSVAEKSP 341 Query: 292 VI 293 V+ Sbjct: 342 VM 343 >UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvestris BL2 RepID=B8EJQ5_METSB Length = 738 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 5/203 (2%) Query: 88 ELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESF 147 L+ ++ + + + + L +++ D LTGL R D++ Sbjct: 524 TLLATLMALIYLFGKERSVYDSVQMDKRLKLQELARSLEFQASTDPLTGLFNRMKFDQAL 583 Query: 148 DHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRY 205 ++ A L L+L DID FK +ND +GH +GD VL L+ A+ R + + R+ Sbjct: 584 AAEILRANRYNRPLSLVLFDIDHFKNINDLHGHQVGDNVLVQLSRIAAAHIRGTDVLARW 643 Query: 206 GGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVV 265 GGEEF+I+V +N + A + + + + +T + GV+ + + + Sbjct: 644 GGEEFVILVPESNGQMAYQTAENLRNAIGQAVFEKAG---AVTCSFGVAEYVDGDAAESL 700 Query: 266 IGRADRAMYEGKQTGRNRCMFID 288 I RAD AMY K GRN+ Sbjct: 701 ISRADAAMYRAKIKGRNQAELSS 723 >UniRef50_A4BIU7 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BIU7_9GAMM Length = 318 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 6/233 (2%) Query: 54 FGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSF 113 F W R + ++M+ + + Q+ + ++ Sbjct: 84 FTTWEQRAYVFKFRNN---RPITGVTEYMYQNCTFIPVIGTTGKVQNLAVIVYDVTDIAT 140 Query: 114 TAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKL 171 + L S D LT L R +E ++ + + +L L++ DID FK Sbjct: 141 SKLELKAANDRLAQLSRTDGLTQLYNRAYWEEMLSNEFKRQKRHAHDLSLIMFDIDHFKK 200 Query: 172 VNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQ 231 VNDTYGH +GD V+R +A + +R+ + RYGGEEF +++ ++ E A R+ + Sbjct: 201 VNDTYGHQVGDDVIRAVAEEVRHNSRNTDIAGRYGGEEFALLLIDSDAENALLFAERLRK 260 Query: 232 LVDNHAITHSEGHINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGRNR 283 ++N ++ EG + +TV+ GV+ + I AD+A+Y K GRNR Sbjct: 261 AIENRRVSTPEGELQVTVSLGVAPWKESFHHYNAWIEAADKALYTSKDEGRNR 313 >UniRef50_A3J8Q2 Two-component response regulator protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8Q2_9ALTE Length = 379 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 2/170 (1%) Query: 122 IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHL 179 L ++ D LTGL R + +S + + L+L D+D+FK VND+YGH Sbjct: 198 RQQLKSLASTDQLTGLLNRHAIHKSLEQLVARHARHGHPFSLILGDLDKFKRVNDSYGHN 257 Query: 180 IGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAIT 239 +GD VL A L R + + R+GGEE ++++ + A ++ + +T Sbjct: 258 VGDEVLIETANRLQDHVRAGDILCRWGGEELLVVLPDTERDSALAVAEKLRCAIGEAPMT 317 Query: 240 HSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 289 I T++ GV+ E +D I RAD A+Y KQ GRNR + ++ Sbjct: 318 AGGHSIEQTISFGVTCYHNGEHIDTTIMRADSALYLAKQGGRNRVVSVEP 367 >UniRef50_A1RG31 Diguanylate cyclase n=3 Tax=Shewanella RepID=A1RG31_SHESW Length = 362 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 3/188 (1%) Query: 105 AFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLM 162 A G+ + + I L +N D LTGL RR L D + ++ L+ Sbjct: 176 ALLAGVSYAYSQIVMSAITALRNVANTDELTGLINRRSLTALIDREAARTLRTHASMSLV 235 Query: 163 LLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEA 222 L DID FK +ND+YGH GD VL +A L R+Y+ V R+GGEEF++++ + EA Sbjct: 236 LCDIDYFKRINDSYGHAAGDHVLVNVANLLQGVLREYDVVARWGGEEFLLLLPNTDIIEA 295 Query: 223 CRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRN 282 + R+ ++V ++ E I +T+T GV+ +E + RAD A+Y GK+ GRN Sbjct: 296 MKVAERLREIVACSHLSFEEQTIPVTMTLGVAVL-GDENWHSTLARADEALYRGKRQGRN 354 Query: 283 RCMFIDEQ 290 + Sbjct: 355 CVVQASAP 362 >UniRef50_Q2SUR3 GGDEF domain protein n=54 Tax=Burkholderiaceae RepID=Q2SUR3_BURTA Length = 628 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 5/199 (2%) Query: 92 AIVENHWQDAHFDAFQEGLLSFTAALTDYK--IYLLTIRSNMDVLTGLPGRRVLDESFDH 149 + + Q E + AL + K L + D LTG RR E Sbjct: 428 SFATVYSQQDLMARLAESMARTEGALQELKRTNQKLEHLATTDPLTGASNRRKFIEQMQA 487 Query: 150 QLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGG 207 ++ A+ L+ LD+D FK +ND YGH +GDVVLR + R Y+ + R GG Sbjct: 488 EIARAKRDGTAFSLLALDLDNFKTINDNYGHQVGDVVLRNFVRQCLAAIRPYDHIARVGG 547 Query: 208 EEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRA-FPEEPLDVVI 266 EEF++++ + A R+ + N + H +TV+ GVS+ + +D ++ Sbjct: 548 EEFMVLLPRMLADTASGIAERVRTTIANASFGIDGTHTPVTVSIGVSQYGRDGDTVDEIL 607 Query: 267 GRADRAMYEGKQTGRNRCM 285 AD+ +Y K GRNR + Sbjct: 608 SAADKLLYRAKNEGRNRVV 626 >UniRef50_Q6AJ00 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ00_DESPS Length = 571 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 106/278 (38%), Gaps = 7/278 (2%) Query: 12 LLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPY 71 +L L + H + +++ D + + G + L Sbjct: 294 ILLLGQNRKIHR--VNKRLATILGYDEPLELLGKGVEKIHLS-EKNFKEFGEKHYNSLKQ 350 Query: 72 VRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYK--IYLLTIRS 129 + +Q G + + A +G+L T K L + Sbjct: 351 RDVFQIDYQLKRKDGSPAWVTLSGQALDSADPPDLDKGVLWMMDDATKRKKAEEKLVRIA 410 Query: 130 NMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRT 187 D LT L RR +L L +++LDID FK VNDT GH GD VL+ Sbjct: 411 ATDSLTKLNNRRHFFSLGHEELALHLHNAQPLSVLMLDIDHFKNVNDTLGHQAGDKVLKI 470 Query: 188 LATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINI 247 + A R + + R GGEEF +I+ +A R RI ++ + I Sbjct: 471 FSKICAVNLRSVDIIGRIGGEEFAVILTNTPRSQAQRTAERIRLAIETSPEFTKQSLPKI 530 Query: 248 TVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 TV+ G++ P E LD +I RAD+ +Y+ K GRNR Sbjct: 531 TVSIGIATNQPPENLDAIICRADKNLYQAKSNGRNRIE 568 >UniRef50_Q1JWQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWQ3_DESAC Length = 648 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 77/300 (25%), Positives = 123/300 (41%), Gaps = 18/300 (6%) Query: 2 IKKTTEIDAILLNLNKAID-AHY-QWLVSMFHSVVA-RDASKPEITDNHSYGLCQFGRWI 58 +D LN A AH W ++ ++ + D + D + +I Sbjct: 349 NSMIKNLDETHHGLNHAQKMAHLGSWRWNLKNNELEWSDEVFRMMGDLPNSYRPTLEYFI 408 Query: 59 DHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAH----------FDAFQE 108 D + P D DE+ + + ++ + + + Sbjct: 409 DKIPPEDRDEVNEAIQVSMDQLRPYEVEHRIIDSQGQLKYVREQGEVCTDEDGNLVGMVG 468 Query: 109 GLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDI 166 +L T + L + D LTG RR L D + A+ L ++ D+ Sbjct: 469 TVLDITTMV--LLQQKLERLATTDELTGAVNRRQLFIYTDQFCQLAKRYKKALSVIFYDL 526 Query: 167 DRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAG 226 D FK VNDTYGH GD VLR + T + S RD + + RYGGEEF I+V + + A Sbjct: 527 DHFKAVNDTYGHAAGDEVLRQITTRIQSMLRDTDILARYGGEEFCILVPETDGDHAYLFA 586 Query: 227 VRICQLVDNHAITH-SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCM 285 RI Q + ++ S + +TV+ GV+ +E +I RAD+ +YE K+ GRN + Sbjct: 587 ERIRQRISESSVNLSSGESLQVTVSMGVATYQEDEQGSSLIDRADQGVYEAKRRGRNCVV 646 >UniRef50_A8ZVJ7 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVJ7_DESOH Length = 410 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 12/248 (4%) Query: 47 HSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAI-VENHWQDAHFDA 105 H+ LC G ++ HL ++P ++ SA L+ +E ++ A+ A Sbjct: 162 HAVALCG-GLFLLHLLIFPWFQMPTDLIVHSALVVFSVAVISLLGNYRIEREFRRAYLRA 220 Query: 106 FQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLML 163 + + + + L + D LTGL RR D D + R+A L++ L+ Sbjct: 221 LKMKIDARQ---LEGLNRQLEEMAVSDPLTGLFNRRHFDAHLDAEWRSAVREQLSISLIF 277 Query: 164 LDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYETVYRYGGEEFIIIVKAANDEEA 222 +DID FKL ND +GH GD+ L+ +A L R + RYGGEEF++++ N ++A Sbjct: 278 IDIDHFKLYNDNHGHQAGDLCLKQIADTLTENVHRPGDACVRYGGEEFVVLLANTNMDQA 337 Query: 223 CRAGVRICQLVDNHAITHSEGHIN--ITVTAGVSRAFP--EEPLDVVIGRADRAMYEGKQ 278 +I + AI H + +TV+ GV+ P ++ + ++ +AD+++Y K Sbjct: 338 LYVAQKIQSHLQALAIPHGYSPVAGEVTVSMGVASMVPDRDDTPEDLLEKADKSLYRAKD 397 Query: 279 TGRNRCMF 286 GRNR Sbjct: 398 AGRNRICV 405 >UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8FZ07_SHESH Length = 298 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 9/184 (4%) Query: 111 LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDR 168 LS + Y L + D L G+ RR LD + A L + L+DID Sbjct: 93 LSLRTTRDIMQNYALKQENITDSLMGIFNRRYLDRRLKDETERALNYSQPLSIFLIDIDH 152 Query: 169 FKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVR 228 FK VND YGH +GD+VL+ +A + R+ + + R+GGEEF++I+ D + R Sbjct: 153 FKQVNDNYGHQVGDLVLKNIAQLIKHSLRESDVLARFGGEEFVVILPRTKDSTSYTLAER 212 Query: 229 ICQLVDNHAITHSEG------HINITVTAGVSRAFPE-EPLDVVIGRADRAMYEGKQTGR 281 + +V++ +T E I++TV+ GV+ + + +I ADRA+Y+ K+ GR Sbjct: 213 LRHVVEDFQLTLPEESDKDSLSISVTVSIGVAGLNAQCKDCQCLIENADRALYQAKRNGR 272 Query: 282 NRCM 285 N+ + Sbjct: 273 NQVI 276 >UniRef50_B6BJ77 Signal transduction response regulator-chey like receiver and ggdef domain n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJ77_9PROT Length = 534 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 62/238 (26%), Positives = 121/238 (50%), Gaps = 11/238 (4%) Query: 58 IDHLGPLDNDELPYVRLMDSAHQHMH-----NCGRELMLAIVENHWQDAHFDAFQEGLLS 112 I + + ++ +V+ ++ + + ++L ++ + F+ + + S Sbjct: 299 IKDISNKEIGKILFVKNLNFYTDKLDMIKNISIVSGIVLLLLSLYMMRKIFNNYINIVNS 358 Query: 113 FTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFK 170 + + L + K L N+D LT + R+ ++ +L+ A+ N L L++ DID FK Sbjct: 359 YQSKL-EIKNRTLLKLVNVDHLTKIHNRKSIETILIKELKRAKRYNHELSLIIFDIDNFK 417 Query: 171 LVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRIC 230 +NDTYGH IGD VL+++A +A+ R+ + R+GGEEFI+I + + A +I Sbjct: 418 NINDTYGHNIGDKVLKSIAKVVANSIRESDYFGRWGGEEFIVISTETSMDNALLVAEKIR 477 Query: 231 QLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID 288 + + + +E IT + GV+ E+ ++ AD A+Y+ K +G+NR +F + Sbjct: 478 ESISTYDFEEAE---KITCSIGVAEYTSEDTHQSIVHNADTALYKAKHSGKNRVIFHE 532 >UniRef50_Q1K1S4 Diguanylate cyclase n=4 Tax=Bacteria RepID=Q1K1S4_DESAC Length = 515 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 66/260 (25%), Positives = 100/260 (38%), Gaps = 25/260 (9%) Query: 59 DHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGL-------- 110 L E +D H + G+ + I L Sbjct: 253 QAKRRLHLTEKKLEDFLDRVHMEVEEIGKFFDIKIQNQKSIAEVLQIANAELSVLNLSYE 312 Query: 111 ------------LSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP-- 156 L A + K LL +N+D LT R D ++ +E Sbjct: 313 QMNRSLVEKTVQLEMLTAELEKKNKLLERLANVDGLTEAYNHRYFQNFLDREINRSERND 372 Query: 157 LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKA 216 L ++++DID FK ND +GH +GD +L+ A S R+Y+ RYGGEEF++++ Sbjct: 373 YTLSVVMVDIDNFKKFNDLHGHQVGDYILKQFADVARSLLREYDLFARYGGEEFVLVLPE 432 Query: 217 ANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE---PLDVVIGRADRAM 273 N +E + + H TH IT + GVS P + + VI +AD A+ Sbjct: 433 TNAQEGEVVAEKFRSTLSEHTFTHERETYYITASFGVSDISPAKDKIDKNDVISQADSAL 492 Query: 274 YEGKQTGRNRCMFIDEQNVI 293 YE K+ GRNR + Sbjct: 493 YESKKKGRNRVTVYSAKKKW 512 >UniRef50_C5T761 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T761_ACIDE Length = 398 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 4/190 (2%) Query: 103 FDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLY 160 + F + ++ +D LTG+P RR L + L A E + Sbjct: 196 LAGLVLSTMGFILMGRERADAEHQQQALLDPLTGVPNRRALMAELERTLAQAVRERRPVA 255 Query: 161 LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDE 220 L+++DIDRFK VNDTYGH+ GD VL +A L R + + RYGGEEF+ ++ + Sbjct: 256 LLMMDIDRFKRVNDTYGHVAGDAVLAAVAQCLKGGLRGQDFIGRYGGEEFLALLPGTDAA 315 Query: 221 EACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE--PLDVVIGRADRAMYEGKQ 278 A + V+ + I +TV+ G P+E ++ AD+AMY K+ Sbjct: 316 GAGVVAEHLRARVERLTMPWEPEDIRVTVSIGAHTRVPDEGTGAQAMVDVADQAMYAAKR 375 Query: 279 TGRNRCMFID 288 GRNR +D Sbjct: 376 AGRNRVERLD 385 >UniRef50_B6BJC6 GGDEF domain/pas/pac sensor domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJC6_9PROT Length = 396 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 116/277 (41%), Gaps = 19/277 (6%) Query: 26 LVSMFHSVVARDASKPEITDNHSYGLCQF------GRWIDHL--GPLDNDELPYVRLMDS 77 ++ +V + E T+ LC F G+ I + L + + ++S Sbjct: 122 SENLPEGIVVHNKELIEYTNPAFEKLCGFNNKELMGKNIVDIFAKNEKLYILDFYKKLES 181 Query: 78 AHQHMHNCGRELMLAIVENHWQDAHFDAFQEG----LLSFTAALTDYK--IYLLTIRSNM 131 +++ + W ++ L+ ++ K L+ + Sbjct: 182 KKIKRTTVETKILTKKNKEIWVKIKTKILEKEDKFYFLTIVTDISKEKSNHEKLSKLAYF 241 Query: 132 DVLTGLPGRRVLDESFDHQLRNAEPLN--LYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LTG+ RR DE + L + DID FK VNDTYGH GD VL+ ++ Sbjct: 242 DNLTGIYNRRKFDEILKIETIRVHRYKRKLSALFFDIDHFKNVNDTYGHDTGDEVLKKMS 301 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + TRD + R+GGEEFI+++ N EA +I + + ++ N+T+ Sbjct: 302 NIIQLHTRDTDYFARWGGEEFILLLPETNVLEANLMAEKIRKTIFSYDF---NKVGNLTI 358 Query: 250 TAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 286 + GVS +E + R D+A+Y+ K GRNR + Sbjct: 359 SIGVSELKEKERSSTFLKRLDKALYKAKNDGRNRTIV 395 >UniRef50_C0QSI7 Diguanylate cyclase with GAF sensor n=1 Tax=Persephonella marina EX-H1 RepID=C0QSI7_PERMH Length = 423 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 12/278 (4%) Query: 16 NKAIDAHYQWLVSMFHSVVA-RDASKPEITDNHSYGLCQFGRWID-HLGPLDNDELPYVR 73 K I H W + + R+ EI +N C+ +D + ++ + Sbjct: 149 EKFIKEHLIWFFDLTSDIQNLREKPSIEIDEN----RCKIKELLDPENVKVLLEDSKDIE 204 Query: 74 LMDSAHQHMHNCGRELMLAIVENHWQD--AHFDAFQEGLLSFTAALTDYKIYLLTIRSNM 131 + H +H +E+ +I + + + + + +LS + T +S Sbjct: 205 QLRFVHTTIHENAKEIYASIKKKEYLKLLEAYISLVKNVLSMISIFTVAIARENIEKSRR 264 Query: 132 DVLTGLPGRRVLDESFDH--QLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLA 189 D LT L R V+D ++ + +LD+D FK +NDTYGH++GD VL+ +A Sbjct: 265 DPLTDLLNRTVMDMIIARTIEISKISETPFSIAMLDVDNFKRINDTYGHIVGDCVLKEIA 324 Query: 190 TYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITV 249 + R + V+RYGGEEF++++ + + + A R R + ++ +I IN+T+ Sbjct: 325 KIIKKSLRKSDFVFRYGGEEFLVLLPSTDSKHAYRIMERTRKNIEKASIKCDSHKINVTI 384 Query: 250 TAGVSRAFPEEP--LDVVIGRADRAMYEGKQTGRNRCM 285 + G+ +P+E + +I +AD+ +Y K+ G+N + Sbjct: 385 SIGLITVYPDETLNIKQIIQKADQNLYTAKKKGKNLVI 422 >UniRef50_C9Y711 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y711_9BURK Length = 292 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 4/203 (1%) Query: 97 HWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP 156 +W L + + L ++ D LTGL RR +L A Sbjct: 89 NWSQYAKSVLLRRQLKRSNEALVVQQQELAFLADHDALTGLYNRREFIRLAQMELLRATR 148 Query: 157 LNL--YLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIV 214 + ++++D+D FK +ND YGH GD VL+ A L R +T+ R GGEEFI+++ Sbjct: 149 VPCETAVIMVDLDFFKKINDRYGHPGGDAVLKATAACLNQALRATDTLARLGGEEFIVLL 208 Query: 215 KAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEE--PLDVVIGRADRA 272 A E A + ++ V N AI G I +T + GVS ++ +D + ADRA Sbjct: 209 PATGREGALQVATKLRDAVRNTAIEFDGGLIAVTASFGVSSVPAQKHGTVDAIYAAADRA 268 Query: 273 MYEGKQTGRNRCMFIDEQNVINR 295 +Y KQ GR+R + + R Sbjct: 269 LYVAKQLGRDRVEYAAPEASELR 291 >UniRef50_B9QXQ9 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QXQ9_9RHOB Length = 398 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 3/210 (1%) Query: 76 DSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLT 135 + ++ L I + L L + L ++ D LT Sbjct: 183 SREKNTYRDLHHDIFLQIAGQVSVLIEKSLLYQQLYELNGQLMEA-HQKLKDQAMHDALT 241 Query: 136 GLPGRRVLDESFDHQLRNAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLA 193 G+ R + + +L A L +++ D+D FK +ND +GHL GD VLRT+A + Sbjct: 242 GVLNRGAIFNLLESELCKAARTQAPLVVIMADLDHFKSINDRFGHLAGDEVLRTVAATIK 301 Query: 194 SWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGV 253 R Y+ V RYGGEEF+I++ + A RI V N I H +G I T++ G+ Sbjct: 302 DTLRGYDHVGRYGGEEFLILLSGTDTNMAVDVAERIRGTVANLEIMHKDGPIRPTISQGL 361 Query: 254 SRAFPEEPLDVVIGRADRAMYEGKQTGRNR 283 + + P + VI RAD A+Y+ K+ GRN Sbjct: 362 ALSDPSGTAEQVIARADAALYKAKEDGRNC 391 >UniRef50_A1WTZ7 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Proteobacteria RepID=A1WTZ7_HALHL Length = 308 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 90/206 (43%), Gaps = 8/206 (3%) Query: 91 LAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQ 150 L + + F K L S D LT LP RRVLD + Sbjct: 103 LELGAMDYITKPFSPRITRTRVRNHVDLKRKTDALERLSQRDGLTDLPNRRVLDRQLPEE 162 Query: 151 LRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASW-TRDYETVYRYGG 207 + L ++++DID FK ND YGH GD LR +A LA+ +R + V RYGG Sbjct: 163 WSRCQRGDTPLSVIMMDIDHFKPYNDHYGHGAGDECLRRVARVLANVPSRTTDLVARYGG 222 Query: 208 EEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHIN--ITVTAGVSRA---FPEEPL 262 EEFI ++ + +A + R V + H + IT++ GV+ P + Sbjct: 223 EEFIALLPYTDAPDAWQMAERFRAAVAALQLPHGHSSTDGIITMSVGVASHTADRPYDSP 282 Query: 263 DVVIGRADRAMYEGKQTGRNRCMFID 288 + ++ AD+A+Y K+ GRNR Sbjct: 283 EQLLEAADQALYAAKKAGRNRVQAAQ 308 >UniRef50_Q1N6U5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N6U5_9GAMM Length = 564 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 6/260 (2%) Query: 29 MFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRE 88 V+ A + D F + +L M Q + Sbjct: 308 YILVVLVSWAMGRSVIDPIKKLTQSFRQLARGALDTPIPKLESNDEMGDLAQA-AEVFKH 366 Query: 89 LMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFD 148 E + EG ++ A + K L + S+ D LTG+ R L+E Sbjct: 367 TNTHTKELLKRYQALSGELEGKVAKRTAELEQKNEELRLLSSTDRLTGVYNRMKLEEQIQ 426 Query: 149 HQLRNAEPLNL--YLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYG 206 H++ A+ L +++LD+D FK VND++GH +GD VL+ A L + R+ + V R+G Sbjct: 427 HEISRAQRYKLDYSIVMLDVDYFKNVNDSFGHQVGDRVLKMFAVELQNNVRESDVVGRWG 486 Query: 207 GEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVI 266 GEEFII N + A ++ +++++ I T + GVS+ E+ L+ +I Sbjct: 487 GEEFIISCSCTNADNAFSLAEKLREIIEHLDF---GSGIACTASFGVSQYQLEDSLESLI 543 Query: 267 GRADRAMYEGKQTGRNRCMF 286 RAD A+YE K+ GRN+ Sbjct: 544 SRADNALYESKRMGRNKVSV 563 >UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTU0_9FIRM Length = 491 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 6/207 (2%) Query: 94 VENHWQDAHFDAFQEGLLSFTAALTDYKI-YLLTIRSNMDVLTGLPGRRVLDESFDHQLR 152 QD D + + + + +++ D LTGL R F+ + + Sbjct: 285 QAKRLQDYDLDLLRSLASQISMTIAHANHVSRVELQAITDGLTGLYNYRYFQTLFEREFK 344 Query: 153 NAEPL--NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEF 210 A L L+++DID FKL NDTYGH GD ++RT+A + RD + V RYGGEEF Sbjct: 345 RAVRYKRPLSLLMIDIDYFKLYNDTYGHRQGDHIIRTIAKIIRQNCRDVDIVVRYGGEEF 404 Query: 211 IIIVKAANDEEACRAGVRICQLVDNHAI--THSEGHINITVTAGVSRAFPE-EPLDVVIG 267 ++ +EA + RI V + HS+ +TV+ GV+ + + +I Sbjct: 405 AVLFPETTVDEAFKIAERIRMAVAEYPFANKHSQPGGILTVSMGVAGYPYDAQSETELID 464 Query: 268 RADRAMYEGKQTGRNRCMFIDEQNVIN 294 AD A+Y K+T +NR + ++ Sbjct: 465 HADMALYRAKRTSKNRVCLYRDHPDVS 491 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.168 0.598 Lambda K H 0.267 0.0514 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,123,572,316 Number of Sequences: 3077464 Number of extensions: 127151972 Number of successful extensions: 368203 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 23096 Number of HSP's successfully gapped in prelim test: 2559 Number of HSP's that attempted gapping in prelim test: 293185 Number of HSP's gapped (non-prelim): 28246 length of query: 296 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 168 effective length of database: 646,480,964 effective search space: 108608801952 effective search space used: 108608801952 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 93 (40.1 bits)