Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	I	Y	P	D	E	A	M	L	Y	A	P	V	E	W	H	D	C	S	E	G	F	E	D	I	R	Y	E	K	S	T	D	G	I	A	K	I	T	I	N	R	P	Q	V	R	N	A	F	R	P	L	T	V	K	E	M	I	Q	A	L
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?	?		?	?		?	?			?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		A	D	A	R	Y	D	D	N	I	G	V	I	I	L	T	G	A	G	D	K	A	F	C	S	G	G	D	Q	K	V	R	G	D	Y	G	G	Y	K	D	D	S	G	V	H	H	L	N	V	L	D	F	Q	R	Q	I	R	T	C	P	K
Secondary structure
SS confidence
Disorder																							?									?	?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		P	V	V	A	M	V	A	G	Y	S	I	G	G	G	H	V	L	H	M	M	C	D	L	T	I	A	A	D	N	A	I	F	G	Q	T	G	P	K	V	G	S	F	D	G	G	W	G	A	S	Y	M	A	R	I	V	G	Q	K	K	A
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		R	E	I	W	F	L	C	R	Q	Y	D	A	K	Q	A	L	D	M	G	L	V	N	T	V	V	P	L	A	D	L	E	K	E	T	V	R	W	C	R	E	M	L	Q	N	S	P	M	A	L	R	C	L	K	A	A	L	N	A	D	C
Secondary structure
SS confidence
Disorder																																															?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Sequence		D	G	Q	A	G	L	Q	E	L	A	G	N	A	T	M	L	F	Y	M	T	E	E	G	Q	E	G	R	N	A	F	N	Q	K	R	Q	P	D	F	S	K	F	K	R	N	P
Secondary structure
SS confidence
Disorder				?																																				?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2iex chain A Region: 19 - 285 Aligned: 250 Modelled: 251 Confidence: 100.0% Identity: 72% PDB header:lyase Chain: A: PDB Molecule:dihydroxynapthoic acid synthetase; PDBTitle: crystal structure of dihydroxynapthoic acid synthetase (gk2873) from2 geobacillus kaustophilus hta426 Phyre2 PDB 3g64 chain A Region: 13 - 279 Aligned: 265 Modelled: 267 Confidence: 100.0% Identity: 26% PDB header:lyase Chain: A: PDB Molecule:putative enoyl-coa hydratase; PDBTitle: crystal structure of putative enoyl-coa hydratase from streptomyces2 coelicolor a3(2) Phyre2 PDB 3moy chain A Region: 20 - 279 Aligned: 255 Modelled: 260 Confidence: 100.0% Identity: 32% PDB header:lyase Chain: A: PDB Molecule:probable enoyl-coa hydratase; PDBTitle: crystal structure of probable enoyl-coa hydratase from mycobacterium2 smegmatis Phyre2 PDB 3kqf chain C Region: 22 - 279 Aligned: 256 Modelled: 255 Confidence: 100.0% Identity: 29% PDB header:isomerase Chain: C: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: 1.8 angstrom resolution crystal structure of enoyl-coa hydratase from2 bacillus anthracis. Phyre2 PDB 1wz8 chain A domain 1 Region: 17 - 278 Aligned: 260 Modelled: 262 Confidence: 100.0% Identity: 21% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Crotonase-like Phyre2 PDB 1q52 chain A Region: 10 - 283 Aligned: 261 Modelled: 261 Confidence: 100.0% Identity: 47% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Crotonase-like Phyre2 PDB 3r0o chain A Region: 20 - 279 Aligned: 256 Modelled: 260 Confidence: 100.0% Identity: 29% PDB header:lyase Chain: A: PDB Molecule:carnitinyl-coa dehydratase; PDBTitle: crystal structure of carnitinyl-coa hydratase from mycobacterium avium Phyre2 PDB 3bpt chain A Region: 19 - 280 Aligned: 260 Modelled: 261 Confidence: 100.0% Identity: 23% PDB header:hydrolase Chain: A: PDB Molecule:3-hydroxyisobutyryl-coa hydrolase; PDBTitle: crystal structure of human beta-hydroxyisobutyryl-coa hydrolase in2 complex with quercetin Phyre2 PDB 3i47 chain A Region: 21 - 279 Aligned: 256 Modelled: 259 Confidence: 100.0% Identity: 28% PDB header:lyase Chain: A: PDB Molecule:enoyl coa hydratase/isomerase (crotonase); PDBTitle: crystal structure of putative enoyl coa hydratase/isomerase2 (crotonase) from legionella pneumophila subsp. pneumophila str.3 philadelphia 1 Phyre2 PDB 3h81 chain A Region: 21 - 279 Aligned: 253 Modelled: 259 Confidence: 100.0% Identity: 34% PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase echa8; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium2 tuberculosis Phyre2 PDB 2qq3 chain F Region: 22 - 279 Aligned: 252 Modelled: 258 Confidence: 100.0% Identity: 29% PDB header:lyase Chain: F: PDB Molecule:enoyl-coa hydratase subunit i; PDBTitle: crystal structure of enoyl-coa hydrates subunit i (gk_2039)2 other form from geobacillus kaustophilus hta426 Phyre2 PDB 1dci chain A Region: 21 - 283 Aligned: 262 Modelled: 263 Confidence: 100.0% Identity: 23% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Crotonase-like Phyre2 PDB 2vx2 chain D Region: 23 - 279 Aligned: 253 Modelled: 257 Confidence: 100.0% Identity: 30% PDB header:isomerase Chain: D: PDB Molecule:enoyl-coa hydratase domain-containing protein 3; PDBTitle: crystal structure of human enoyl coenzyme a hydratase2 domain-containing protein 3 (echdc3) Phyre2 PDB 2hw5 chain F Region: 21 - 279 Aligned: 254 Modelled: 259 Confidence: 100.0% Identity: 31% PDB header:lyase Chain: F: PDB Molecule:enoyl-coa hydratase; PDBTitle: the crystal structure of human enoyl-coenzyme a (coa) hydratase short2 chain 1, echs1 Phyre2 PDB 1nzy chain A Region: 22 - 285 Aligned: 261 Modelled: 264 Confidence: 100.0% Identity: 26% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Crotonase-like Phyre2 PDB 3myb chain A Region: 25 - 282 Aligned: 255 Modelled: 258 Confidence: 100.0% Identity: 27% PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase mycobacterium smegmatis Phyre2 PDB 1hzd chain A Region: 19 - 279 Aligned: 259 Modelled: 261 Confidence: 100.0% Identity: 26% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Crotonase-like Phyre2 PDB 2ej5 chain B Region: 22 - 279 Aligned: 247 Modelled: 258 Confidence: 100.0% Identity: 32% PDB header:lyase Chain: B: PDB Molecule:enoyl-coa hydratase subunit ii; PDBTitle: crystal structure of gk2038 protein (enoyl-coa hydratase subunit ii)2 from geobacillus kaustophilus Phyre2 PDB 3p5m chain B Region: 21 - 279 Aligned: 249 Modelled: 259 Confidence: 100.0% Identity: 27% PDB header:isomerase Chain: B: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase from2 mycobacterium avium Phyre2 PDB 3hrx chain D Region: 25 - 280 Aligned: 251 Modelled: 253 Confidence: 100.0% Identity: 29% PDB header:lyase Chain: D: PDB Molecule:probable enoyl-coa hydratase; PDBTitle: crystal structure of phenylacetic acid degradation protein paag Phyre2 PDB 3h02 chain F Region: 9 - 260 Aligned: 235 Modelled: 225 Confidence: 100.0% Identity: 92% PDB header:lyase Chain: F: PDB Molecule:naphthoate synthase; PDBTitle: 2.15 angstrom resolution crystal structure of naphthoate synthase from2 salmonella typhimurium. Phyre2 1 c2iexA_ 2 c3g64A_ 3 c3moyA_ 4 c3kqfC_ 5 d1wz8a1 6 d1q52a_ 7 c3r0oA_ 8 c3bptA_ 9 c3i47A_ 10 c3h81A_ 11 c2qq3F_ 12 d1dcia_ 13 c2vx2D_ 14 c2hw5F_ 15 d1nzya_ 16 c3mybA_ 17 d1hzda_ 18 c2ej5B_ 19 c3p5mB_ 20 c3hrxD_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 c3h02F_ 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2iexA_ 100.0 72 PDB header:lyase Chain: A: PDB Molecule:dihydroxynapthoic acid synthetase; PDBTitle: crystal structure of dihydroxynapthoic acid synthetase (gk2873) from2 geobacillus kaustophilus hta426 2 c3g64A_ 100.0 26 PDB header:lyase Chain: A: PDB Molecule:putative enoyl-coa hydratase; PDBTitle: crystal structure of putative enoyl-coa hydratase from streptomyces2 coelicolor a3(2) 3 c3moyA_ 100.0 32 PDB header:lyase Chain: A: PDB Molecule:probable enoyl-coa hydratase; PDBTitle: crystal structure of probable enoyl-coa hydratase from mycobacterium2 smegmatis 4 c3kqfC_ 100.0 29 PDB header:isomerase Chain: C: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: 1.8 angstrom resolution crystal structure of enoyl-coa hydratase from2 bacillus anthracis. 5 d1wz8a1 100.0 21 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 6 d1q52a_ 100.0 47 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 7 c3r0oA_ 100.0 29 PDB header:lyase Chain: A: PDB Molecule:carnitinyl-coa dehydratase; PDBTitle: crystal structure of carnitinyl-coa hydratase from mycobacterium avium 8 c3bptA_ 100.0 23 PDB header:hydrolase Chain: A: PDB Molecule:3-hydroxyisobutyryl-coa hydrolase; PDBTitle: crystal structure of human beta-hydroxyisobutyryl-coa hydrolase in2 complex with quercetin 9 c3i47A_ 100.0 28 PDB header:lyase Chain: A: PDB Molecule:enoyl coa hydratase/isomerase (crotonase); PDBTitle: crystal structure of putative enoyl coa hydratase/isomerase2 (crotonase) from legionella pneumophila subsp. pneumophila str.3 philadelphia 1 10 c3h81A_ 100.0 34 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase echa8; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium2 tuberculosis 11 c2qq3F_ 100.0 29 PDB header:lyase Chain: F: PDB Molecule:enoyl-coa hydratase subunit i; PDBTitle: crystal structure of enoyl-coa hydrates subunit i (gk_2039)2 other form from geobacillus kaustophilus hta426 12 d1dcia_ 100.0 23 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 13 c2vx2D_ 100.0 30 PDB header:isomerase Chain: D: PDB Molecule:enoyl-coa hydratase domain-containing protein 3; PDBTitle: crystal structure of human enoyl coenzyme a hydratase2 domain-containing protein 3 (echdc3) 14 c2hw5F_ 100.0 31 PDB header:lyase Chain: F: PDB Molecule:enoyl-coa hydratase; PDBTitle: the crystal structure of human enoyl-coenzyme a (coa) hydratase short2 chain 1, echs1 15 d1nzya_ 100.0 26 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 16 c3mybA_ 100.0 27 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase mycobacterium smegmatis 17 d1hzda_ 100.0 26 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 18 c2ej5B_ 100.0 32 PDB header:lyase Chain: B: PDB Molecule:enoyl-coa hydratase subunit ii; PDBTitle: crystal structure of gk2038 protein (enoyl-coa hydratase subunit ii)2 from geobacillus kaustophilus 19 c3p5mB_ 100.0 27 PDB header:isomerase Chain: B: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase from2 mycobacterium avium 20 c3hrxD_ 100.0 29 PDB header:lyase Chain: D: PDB Molecule:probable enoyl-coa hydratase; PDBTitle: crystal structure of phenylacetic acid degradation protein paag 21 c2ppyE_ not modelled 100.0 26 PDB header:lyase Chain: E: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydrates (gk_1992) from geobacillus2 kaustophilus hta426 22 d1mj3a_ not modelled 100.0 31 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 23 d2fw2a1 not modelled 100.0 22 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 24 c3swxB_ not modelled 100.0 22 PDB header:isomerase Chain: B: PDB Molecule:probable enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus 25 c3trrA_ not modelled 100.0 26 PDB header:isomerase Chain: A: PDB Molecule:probable enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus 26 c3ju1A_ not modelled 100.0 21 PDB header:lyase, isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of enoyl-coa hydratase/isomerase family protein 27 c3rsiA_ not modelled 100.0 27 PDB header:isomerase Chain: A: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: the structure of a putative enoyl-coa hydratase/isomerase from2 mycobacterium abscessus atcc 19977 / dsm 44196 28 d1uiya_ not modelled 100.0 30 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 29 c3hinA_ not modelled 100.0 20 PDB header:lyase Chain: A: PDB Molecule:putative 3-hydroxybutyryl-coa dehydratase; PDBTitle: crystal structure of putative enoyl-coa hydratase from2 rhodopseudomonas palustris cga009 30 c3peaD_ not modelled 100.0 25 PDB header:isomerase Chain: D: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of enoyl-coa hydratase from bacillus anthracis str.2 'ames ancestor' 31 c3qxzA_ not modelled 100.0 23 PDB header:lyase,isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus 32 c3qxiA_ not modelled 100.0 27 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase echa1; PDBTitle: crystal structure of enoyl-coa hydratase echa1 from mycobacterium2 marinum 33 d1ef8a_ not modelled 100.0 27 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 34 c3sllC_ not modelled 100.0 24 PDB header:isomerase Chain: C: PDB Molecule:probable enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus 35 c3gkbA_ not modelled 100.0 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative enoyl-coa hydratase; PDBTitle: crystal structure of a putative enoyl-coa hydratase from streptomyces2 avermitilis 36 d1wdka4 not modelled 100.0 20 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 37 d1xx4a_ not modelled 100.0 20 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 38 c3njbA_ not modelled 100.0 24 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium smegmatis,2 iodide soak 39 c2d3tB_ not modelled 100.0 20 PDB header:lyase, oxidoreductase/transferase Chain: B: PDB Molecule:fatty oxidation complex alpha subunit; PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v 40 c3oc7A_ not modelled 100.0 24 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of an enoyl-coa hydratase from mycobacterium avium 41 c3q1tB_ not modelled 100.0 22 PDB header:lyase Chain: B: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium avium 42 c3h0uB_ not modelled 100.0 21 PDB header:lyase Chain: B: PDB Molecule:putative enoyl-coa hydratase; PDBTitle: crystal structure of a putative enoyl-coa hydratase from2 streptomyces avermitilis 43 c3rrvC_ not modelled 100.0 22 PDB header:isomerase Chain: C: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase from2 mycobacterium paratuberculosis 44 c3h02F_ 100.0 92 PDB header:lyase Chain: F: PDB Molecule:naphthoate synthase; PDBTitle: 2.15 angstrom resolution crystal structure of naphthoate synthase from2 salmonella typhimurium. 45 c3lkeA_ not modelled 100.0 19 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase from bacillus2 halodurans 46 c3he2C_ not modelled 100.0 27 PDB header:lyase Chain: C: PDB Molecule:enoyl-coa hydratase echa6; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium2 tuberculosis 47 c2fbmB_ not modelled 100.0 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:y chromosome chromodomain protein 1, telomeric isoform b; PDBTitle: acetyltransferase domain of cdy1 48 c2x58B_ not modelled 100.0 22 PDB header:oxidoreductase Chain: B: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: the crystal structure of mfe1 liganded with coa 49 c3hp0B_ not modelled 100.0 17 PDB header:lyase Chain: B: PDB Molecule:putative polyketide biosynthesis enoyl-coa PDBTitle: crystal structure of a putative polyketide biosynthesis2 enoyl-coa hydratase (pksh) from bacillus subtilis 50 d2f6qa1 not modelled 100.0 27 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 51 c2f6qA_ not modelled 100.0 27 PDB header:isomerase Chain: A: PDB Molecule:peroxisomal 3,2-trans-enoyl-coa isomerase; PDBTitle: the crystal structure of human peroxisomal delta3, delta2 enoyl coa2 isomerase (peci) 52 c2wtbA_ not modelled 100.0 26 PDB header:oxidoreductase Chain: A: PDB Molecule:fatty acid multifunctional protein (atmfp2); PDBTitle: arabidopsis thaliana multifuctional protein, mfp2 53 c2q35A_ not modelled 100.0 21 PDB header:lyase Chain: A: PDB Molecule:curf; PDBTitle: crystal structure of the y82f variant of ech2 decarboxylase domain of2 curf from lyngbya majuscula 54 d1sg4a1 not modelled 100.0 18 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 55 c3isaA_ not modelled 100.0 21 PDB header:hydrolase Chain: A: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of putative enoyl-coa hydratase/isomerase from2 bordetella parapertussis 56 c2pg8C_ not modelled 100.0 24 PDB header:ligand binding protein Chain: C: PDB Molecule:dpgc; PDBTitle: crystal structure of r254k mutanat of dpgc with bound substrate analog 57 c2w3pB_ not modelled 100.0 19 PDB header:lyase Chain: B: PDB Molecule:benzoyl-coa-dihydrodiol lyase; PDBTitle: boxc crystal structure 58 c2j5iF_ not modelled 100.0 31 PDB header:lyase Chain: F: PDB Molecule:p-hydroxycinnamoyl coa hydratase/lyase; PDBTitle: crystal structure of hydroxycinnamoyl-coa hydratase-lyase 59 d1pjha_ not modelled 100.0 15 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 60 c3laoA_ not modelled 100.0 19 PDB header:lyase, isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of enoyl-coa hydratase from pseudomonas2 aeruginosa pa01 61 c3qkaB_ not modelled 100.0 26 PDB header:lyase Chain: B: PDB Molecule:enoyl-coa hydratase, echa5; PDBTitle: crystal structure of enoyl-coa hydratase echa5 from mycobacterium2 marinum 62 c3l3sF_ not modelled 100.0 24 PDB header:isomerase Chain: F: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of an enoyl-coa hydrotase/isomerase family2 protein from silicibacter pomeroyi 63 d1szoa_ not modelled 100.0 19 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 64 d2a7ka1 not modelled 100.0 26 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 65 c1rjnC_ not modelled 100.0 46 PDB header:lyase Chain: C: PDB Molecule:menb; PDBTitle: the crystal structure of menb (rv0548c) from mycobacterium2 tuberculosis in complex with the coa portion of naphthoyl coa 66 c3r6hA_ not modelled 100.0 18 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase, echa3; PDBTitle: crystal structure of an enoyl-coa hydratase (echa3) from mycobacterium2 marinum 67 c3p85A_ not modelled 100.0 31 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure enoyl-coa hydratase from mycobacterium avium 68 c3fduF_ not modelled 100.0 24 PDB header:isomerase Chain: F: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a putative enoyl-coa hydratase/isomerase from2 acinetobacter baumannii 69 d1rjma_ not modelled 100.0 47 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 70 c3omeE_ not modelled 100.0 31 PDB header:lyase Chain: E: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of a probable enoyl-coa hydratase from mycobacterium2 smegmatis 71 c3m6nA_ not modelled 100.0 17 PDB header:lyase Chain: A: PDB Molecule:rpff protein; PDBTitle: crystal structure of rpff 72 c3ot6A_ not modelled 100.0 18 PDB header:isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase family protein2 from psudomonas syringae 73 c2j5gL_ not modelled 100.0 17 PDB header:hydrolase Chain: L: PDB Molecule:alr4455 protein; PDBTitle: the native structure of a beta-diketone hydrolase from the2 cyanobacterium anabaena sp. pcc 7120 74 c3qreA_ not modelled 100.0 28 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase, echa12_1; PDBTitle: crystal structure of an enoyl-coa hydratase echa12_1 from2 mycobacterium marinum 75 c3qmjA_ not modelled 100.0 23 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase, echa8_6; PDBTitle: crystal structure of enoyl-coa hydratase echa8_6 from mycobacterium2 marinum 76 c2f9iC_ not modelled 99.6 16 PDB header:transferase Chain: C: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl PDBTitle: crystal structure of the carboxyltransferase subunit of acc2 from staphylococcus aureus 77 c3bezC_ not modelled 99.5 17 PDB header:hydrolase Chain: C: PDB Molecule:protease 4; PDBTitle: crystal structure of escherichia coli signal peptide peptidase (sppa),2 semet crystals 78 d2f9ya1 not modelled 99.3 16 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 79 d2cbya1 not modelled 99.2 15 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit 80 c2deoA_ not modelled 99.2 17 PDB header:hydrolase Chain: A: PDB Molecule:441aa long hypothetical nfed protein; PDBTitle: 1510-n membrane protease specific for a stomatin homolog from2 pyrococcus horikoshii 81 c3kthD_ not modelled 99.1 15 PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form 82 c1tg6G_ not modelled 99.0 13 PDB header:hydrolase Chain: G: PDB Molecule:putative atp-dependent clp protease proteolytic subunit; PDBTitle: crystallography and mutagenesis point to an essential role for the n-2 terminus of human mitochondrial clpp 83 c2cbyG_ not modelled 99.0 14 PDB header:hydrolase Chain: G: PDB Molecule:atp-dependent clp protease proteolytic subunit 1; PDBTitle: crystal structure of the atp-dependent clp protease2 proteolytic subunit 1 (clpp1) from mycobacterium3 tuberculosis 84 c3p2lD_ not modelled 99.0 17 PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: crystal structure of atp-dependent clp protease subunit p from2 francisella tularensis 85 d2f6ia1 not modelled 99.0 12 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit 86 d1tg6a1 not modelled 99.0 15 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit 87 d1yg6a1 not modelled 98.9 14 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit 88 c3q7hM_ not modelled 98.9 12 PDB header:hydrolase Chain: M: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of the clpp subunit of the atp-dependent clp protease from2 coxiella burnetii 89 c2f6iG_ not modelled 98.8 12 PDB header:hydrolase Chain: G: PDB Molecule:atp-dependent clp protease, putative; PDBTitle: crystal structure of the clpp protease catalytic domain from2 plasmodium falciparum 90 c2f9yB_ not modelled 98.8 13 PDB header:ligase Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl transferase subunit PDBTitle: the crystal structure of the carboxyltransferase subunit of acc from2 escherichia coli 91 d2f9yb1 not modelled 98.8 13 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 92 d1y7oa1 not modelled 98.8 17 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit 93 d1on3a1 not modelled 98.8 16 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 94 c2f9iD_ not modelled 98.7 12 PDB header:transferase Chain: D: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl PDBTitle: crystal structure of the carboxyltransferase subunit of acc2 from staphylococcus aureus 95 d1vrga2 not modelled 98.6 11 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 96 c1y7oE_ not modelled 98.6 17 PDB header:hydrolase Chain: E: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: the structure of streptococcus pneumoniae a153p clpp 97 d1xnya2 not modelled 98.6 14 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 98 c1on3E_ not modelled 98.6 16 PDB header:transferase Chain: E: PDB Molecule:methylmalonyl-coa carboxyltransferase 12s PDBTitle: transcarboxylase 12s crystal structure: hexamer assembly2 and substrate binding to a multienzyme core (with3 methylmalonyl-coenzyme a and methylmalonic acid bound) 99 d1pixa2 not modelled 98.6 15 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 100 c3n6rF_ not modelled 98.5 15 PDB header:ligase Chain: F: PDB Molecule:propionyl-coa carboxylase, beta subunit; PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) 101 d2a7sa1 not modelled 98.5 14 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 102 d2a7sa2 not modelled 98.5 12 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 103 c1x0uB_ not modelled 98.5 16 PDB header:lyase Chain: B: PDB Molecule:hypothetical methylmalonyl-coa decarboxylase alpha subunit; PDBTitle: crystal structure of the carboxyl transferase subunit of putative pcc2 of sulfolobus tokodaii 104 d1on3a2 not modelled 98.4 12 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 105 d1vrga1 not modelled 98.3 15 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 106 c3u9rB_ not modelled 98.3 20 PDB header:ligase Chain: B: PDB Molecule:methylcrotonyl-coa carboxylase, beta-subunit; PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc), beta subunit 107 c1vrgE_ not modelled 98.2 13 PDB header:ligase Chain: E: PDB Molecule:propionyl-coa carboxylase, beta subunit; PDBTitle: crystal structure of propionyl-coa carboxylase, beta subunit (tm0716)2 from thermotoga maritima at 2.30 a resolution 108 c2a7sD_ not modelled 98.2 14 PDB header:ligase Chain: D: PDB Molecule:probable propionyl-coa carboxylase beta chain 5; PDBTitle: crystal structure of the acyl-coa carboxylase, accd5, from2 mycobacterium tuberculosis 109 c1xnwD_ not modelled 98.2 16 PDB header:ligase Chain: D: PDB Molecule:propionyl-coa carboxylase complex b subunit; PDBTitle: acyl-coa carboxylase beta subunit from s. coelicolor (pccb),2 apo form #2, mutant d422i 110 d1xnya1 not modelled 98.2 17 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 111 c1pixB_ not modelled 98.1 13 PDB header:lyase Chain: B: PDB Molecule:glutaconyl-coa decarboxylase a subunit; PDBTitle: crystal structure of the carboxyltransferase subunit of the2 bacterial ion pump glutaconyl-coenzyme a decarboxylase 112 c3glmD_ not modelled 98.1 11 PDB header:lyase Chain: D: PDB Molecule:glutaconyl-coa decarboxylase subunit a; PDBTitle: glutaconyl-coa decarboxylase a subunit from clostridium2 symbiosum co-crystallized with crotonyl-coa 113 d1pixa3 not modelled 97.8 17 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 114 c1od4C_ not modelled 97.6 15 PDB header:ligase Chain: C: PDB Molecule:acetyl-coenzyme a carboxylase; PDBTitle: acetyl-coa carboxylase carboxyltransferase domain 115 c3ff6D_ not modelled 97.4 18 PDB header:ligase Chain: D: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: human acc2 ct domain with cp-640186 116 c2x24B_ not modelled 97.2 19 PDB header:ligase Chain: B: PDB Molecule:acetyl-coa carboxylase; PDBTitle: bovine acc2 ct domain in complex with inhibitor 117 c3h0jA_ not modelled 96.9 15 PDB header:transferase Chain: A: PDB Molecule:acetyl-coa carboxylase; PDBTitle: crystal structure of the carboxyltransferase domain of2 acetyl-coenzyme a carboxylase in complex with compound 2 118 c1uytC_ not modelled 96.8 15 PDB header:transferase Chain: C: PDB Molecule:acetyl-coa carboxylase; PDBTitle: acetyl-coa carboxylase carboxyltransferase domain 119 d1uyra1 not modelled 96.8 13 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 120 d1uyra2 not modelled 75.6 15 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0