BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (251 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B7LVW5 Uncharacterized exonuclease xni n=98 Tax=Enterob... 506 e-142 UniRef50_B5FAT7 Uncharacterized exonuclease xni n=138 Tax=Gammap... 274 2e-72 UniRef50_A0KHE3 Uncharacterized exonuclease xni n=3 Tax=Aeromona... 222 7e-57 UniRef50_Q47YA8 Uncharacterized exonuclease xni n=1 Tax=Colwelli... 197 3e-49 UniRef50_A1SYB8 Uncharacterized exonuclease xni n=2 Tax=Psychrom... 194 2e-48 UniRef50_Q3ICC5 Uncharacterized exonuclease xni n=3 Tax=Alteromo... 189 9e-47 UniRef50_A6VZB4 5'-3' exonuclease n=2 Tax=Marinomonas RepID=A6VZ... 187 2e-46 UniRef50_Q1N615 Exonuclease IX n=1 Tax=Bermanella marisrubri Rep... 174 3e-42 UniRef50_A4Y4Y4 Uncharacterized exonuclease xni n=21 Tax=Shewane... 174 4e-42 UniRef50_A2SN70 DNA polymerase I n=1 Tax=Methylibium petroleiphi... 144 3e-33 UniRef50_C7MNN5 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID... 143 6e-33 UniRef50_Q21SR9 5'-3' exonuclease n=1 Tax=Rhodoferax ferrireduce... 143 7e-33 UniRef50_Q1NVM3 DNA polymerase A n=2 Tax=Deltaproteobacteria Rep... 141 2e-32 UniRef50_B0VJ17 DNA polymerase I n=1 Tax=Candidatus Cloacamonas ... 140 3e-32 UniRef50_Q2LQV1 DNA polymerase I n=1 Tax=Syntrophus aciditrophic... 139 8e-32 UniRef50_A6G5W6 DNA polymerase I n=2 Tax=cellular organisms RepI... 137 3e-31 UniRef50_A1QZY0 DNA polymerase I n=1 Tax=Borrelia turicatae 91E1... 137 3e-31 UniRef50_C9RNE9 DNA polymerase I n=1 Tax=Fibrobacter succinogene... 137 4e-31 UniRef50_A6FZM5 DNA polymerase I n=2 Tax=Deltaproteobacteria Rep... 137 4e-31 UniRef50_Q1RH76 DNA polymerase I n=18 Tax=Rickettsia RepID=DPO1_... 136 6e-31 UniRef50_B2V602 5'-3' exonuclease n=4 Tax=Hydrogenothermaceae Re... 135 1e-30 UniRef50_Q9RAA9 DNA polymerase I n=2 Tax=spotted fever group Rep... 135 1e-30 UniRef50_O51498 DNA polymerase I n=20 Tax=Borrelia RepID=DPO1_BORBU 134 2e-30 UniRef50_C1ZLA6 DNA polymerase I n=1 Tax=Planctomyces limnophilu... 134 3e-30 UniRef50_Q6X9Q9 DNA polymerase I n=1 Tax=Spirochaeta thermophila... 134 3e-30 UniRef50_A5IXV4 DNA polymerase I: 5' 3' exonuclease domain n=7 T... 134 3e-30 UniRef50_D1AJI6 DNA polymerase I n=2 Tax=Fusobacteriaceae RepID=... 133 5e-30 UniRef50_Q59156 DNA polymerase I n=6 Tax=Clostridia RepID=DPO1_A... 132 1e-29 UniRef50_B5RMA2 DNA polymerase I n=2 Tax=Borrelia RepID=B5RMA2_B... 132 1e-29 UniRef50_C8PRX0 DNA polymerase I n=1 Tax=Treponema vincentii ATC... 132 1e-29 UniRef50_Q7UI29 DNA polymerase I n=1 Tax=Rhodopirellula baltica ... 131 2e-29 UniRef50_Q04957 DNA polymerase I n=117 Tax=Firmicutes RepID=DPO1... 131 2e-29 UniRef50_P74933 DNA polymerase I n=3 Tax=Bacteria RepID=DPO1_TREPA 130 4e-29 UniRef50_A5CDT3 DNA polymerase I n=2 Tax=Orientia tsutsugamushi ... 130 4e-29 UniRef50_P43741 DNA polymerase I n=222 Tax=cellular organisms Re... 130 4e-29 UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkalip... 130 5e-29 UniRef50_D2R075 DNA polymerase I n=1 Tax=Pirellula staleyi DSM 6... 129 1e-28 UniRef50_Q252Y8 DNA polymerase I n=14 Tax=Chlamydiaceae RepID=Q2... 128 2e-28 UniRef50_Q9F173 DNA polymerase I n=177 Tax=Proteobacteria RepID=... 128 2e-28 UniRef50_D1AZX7 DNA polymerase I n=3 Tax=Campylobacterales RepID... 128 2e-28 UniRef50_C8W0H1 DNA polymerase I n=2 Tax=Clostridia RepID=C8W0H1... 127 2e-28 UniRef50_C0X9C1 Possible DNA polymerase I (Fragment) n=1 Tax=Ent... 127 2e-28 UniRef50_Q6KHF6 DNA polymerase I n=1 Tax=Mycoplasma mobile RepID... 127 2e-28 UniRef50_Q0AVE2 DNA polymerase I n=1 Tax=Syntrophomonas wolfei s... 127 3e-28 UniRef50_C3XEZ4 DNA polymerase I n=3 Tax=Bacteria RepID=C3XEZ4_9... 127 4e-28 UniRef50_Q1AUF6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilu... 127 5e-28 UniRef50_Q65W28 PolA protein n=42 Tax=Bacteria RepID=Q65W28_MANSM 126 6e-28 UniRef50_Q1QDQ1 DNA polymerase I n=24 Tax=cellular organisms Rep... 126 8e-28 UniRef50_D1CFH6 DNA polymerase I n=1 Tax=Thermobaculum terrenum ... 126 8e-28 UniRef50_B3TC83 Putative DNA polymerase family A n=1 Tax=uncultu... 125 1e-27 UniRef50_C2MBR8 DNA polymerase type I n=1 Tax=Porphyromonas ueno... 125 1e-27 UniRef50_A9H4T5 DNA polymerase I n=43 Tax=Alphaproteobacteria Re... 125 1e-27 UniRef50_O67550 5'-3' exonuclease n=2 Tax=Aquificaceae RepID=EX5... 125 2e-27 UniRef50_A1ASW3 DNA polymerase I n=12 Tax=Deltaproteobacteria Re... 125 2e-27 UniRef50_Q9S1G2 DNA polymerase I n=25 Tax=Rhizobiales RepID=DPO1... 125 2e-27 UniRef50_A0LCQ8 DNA polymerase I n=1 Tax=Magnetococcus sp. MC-1 ... 125 2e-27 UniRef50_B6IUP1 DNA polymerase I, putative n=2 Tax=Alphaproteoba... 124 2e-27 UniRef50_C7N982 DNA polymerase I n=6 Tax=Leptotrichia RepID=C7N9... 124 3e-27 UniRef50_D0XR83 DNA polymerase I n=2 Tax=Alphaproteobacteria Rep... 124 4e-27 UniRef50_Q3Z6P9 DNA-directed DNA polymerase I n=5 Tax=Dehalococc... 124 4e-27 UniRef50_A6DML3 DNA-directed DNA polymerase, DNA polimerase I pr... 123 5e-27 UniRef50_B1C859 DNA polymerase I n=1 Tax=Anaerofustis stercoriho... 123 5e-27 UniRef50_A0LIP7 DNA polymerase I n=1 Tax=Syntrophobacter fumarox... 123 6e-27 UniRef50_C6XHK7 DNA polymerase I n=1 Tax=Candidatus Liberibacter... 123 6e-27 UniRef50_Q1D7R1 DNA polymerase I n=4 Tax=Myxococcaceae RepID=Q1D... 122 8e-27 UniRef50_Q6MPP6 DNA polymerase I n=1 Tax=Bdellovibrio bacteriovo... 122 9e-27 UniRef50_Q9PQ75 5'-3' exonuclease n=15 Tax=Ureaplasma RepID=EX53... 122 1e-26 UniRef50_D0WFK8 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID... 122 1e-26 UniRef50_Q8K9D0 5'-3' exonuclease n=4 Tax=Buchnera aphidicola Re... 121 2e-26 UniRef50_Q2S226 DNA polymerase I n=4 Tax=Rhodothermaceae RepID=Q... 121 2e-26 UniRef50_Q04Q27 DNA-directed DNA polymerase n=4 Tax=Leptospira R... 121 2e-26 UniRef50_A6SUA5 5'-3' exonuclease n=3 Tax=cellular organisms Rep... 121 2e-26 UniRef50_A0PZF5 DNA polymerase I n=27 Tax=Clostridia RepID=A0PZF... 121 3e-26 UniRef50_B8D217 DNA polymerase I n=1 Tax=Halothermothrix orenii ... 120 3e-26 UniRef50_C7LZ56 DNA polymerase I n=1 Tax=Acidimicrobium ferrooxi... 120 3e-26 UniRef50_Q8H850 Putative uncharacterized protein OJ1626B05.7 n=1... 120 3e-26 UniRef50_B9L837 DNA polymerase I n=2 Tax=Nautiliaceae RepID=B9L8... 120 4e-26 UniRef50_C7HT94 DNA polymerase I n=1 Tax=Anaerococcus vaginalis ... 120 4e-26 UniRef50_UPI0001BC5C75 DNA polymerase I n=3 Tax=Fusobacterium Re... 120 5e-26 UniRef50_C3U0N1 Truncated DNA polymerase I n=1 Tax=uncultured ba... 120 5e-26 UniRef50_C5B5N3 DNA polymerase I n=1 Tax=Methylobacterium extorq... 120 5e-26 UniRef50_B6R626 DNA polymerase I superfamily protein n=1 Tax=Pse... 120 6e-26 UniRef50_Q4JW27 DNA polymerase I n=2 Tax=Corynebacterium jeikeiu... 119 1e-25 UniRef50_A5WH47 DNA polymerase I n=4 Tax=Bacteria RepID=A5WH47_P... 119 1e-25 UniRef50_A6CAX6 DNA polymerase I n=2 Tax=Planctomycetaceae RepID... 118 2e-25 UniRef50_Q73M72 DNA polymerase I n=1 Tax=Treponema denticola Rep... 118 2e-25 UniRef50_B0TER6 DNA polymerase i n=2 Tax=Heliobacteriaceae RepID... 118 2e-25 UniRef50_Q7WZP8 DNA polymerase type I n=2 Tax=unclassified Bacte... 118 2e-25 UniRef50_C3J9S9 DNA polymerase type I n=2 Tax=Bacteria RepID=C3J... 118 2e-25 UniRef50_B9KYZ1 DNA polymerase I n=4 Tax=Thermomicrobia (class) ... 117 4e-25 UniRef50_D0KVP7 5'-3' exonuclease, N-terminal resolvase-like dom... 117 4e-25 UniRef50_A4YLA1 DNA polymerase I (POL I) n=63 Tax=cellular organ... 117 4e-25 UniRef50_C4L1C4 5'-3' exonuclease n=1 Tax=Exiguobacterium sp. AT... 117 4e-25 UniRef50_C8W7U1 DNA polymerase I n=3 Tax=Coriobacteriaceae RepID... 117 4e-25 UniRef50_Q1PUU8 Stongly similair to DNA polymerase I n=1 Tax=Can... 117 4e-25 UniRef50_A5GAH5 Ribonuclease H n=6 Tax=Desulfuromonadales RepID=... 117 4e-25 UniRef50_B8I3Y7 DNA polymerase I n=6 Tax=Clostridium RepID=B8I3Y... 117 5e-25 UniRef50_B1GZ14 DNA polymerase I n=1 Tax=uncultured Termite grou... 116 6e-25 UniRef50_C1XI40 DNA polymerase I n=24 Tax=Bacteria RepID=C1XI40_... 116 6e-25 UniRef50_O34996 DNA polymerase I n=38 Tax=Bacteria RepID=DPO1_BACSU 116 7e-25 UniRef50_B0S404 DNA polymerase I n=2 Tax=Finegoldia magna RepID=... 116 7e-25 UniRef50_P59200 DNA polymerase I n=187 Tax=Firmicutes RepID=DPO1... 115 1e-24 UniRef50_Q4A5N5 Putative DNA polymerase I n=2 Tax=Mycoplasma syn... 115 1e-24 UniRef50_Q1V0V5 DNA polymerase I n=3 Tax=Candidatus Pelagibacter... 115 1e-24 UniRef50_B8GPC5 5'-3' exonuclease n=1 Tax=Thioalkalivibrio sp. H... 115 1e-24 UniRef50_C6CWL9 5'-3' exonuclease n=3 Tax=Bacillales RepID=C6CWL... 115 1e-24 UniRef50_D1VS49 DNA polymerase I n=1 Tax=Peptoniphilus lacrimali... 115 2e-24 UniRef50_A7HP95 DNA polymerase I n=11 Tax=Alphaproteobacteria Re... 115 2e-24 UniRef50_Q2SRK9 DNA polymerase I n=4 Tax=Mollicutes RepID=Q2SRK9... 115 2e-24 UniRef50_A6NVK8 DNA polymerase I n=2 Tax=Bacteria RepID=A6NVK8_9... 114 2e-24 UniRef50_B7FRK5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 114 2e-24 UniRef50_B2UNN5 DNA polymerase I n=1 Tax=Akkermansia muciniphila... 114 3e-24 UniRef50_Q1JIU7 DNA polymerase I n=14 Tax=Streptococcus RepID=Q1... 114 3e-24 UniRef50_C0QYF7 DNA polymerase I n=3 Tax=Brachyspira RepID=C0QYF... 114 3e-24 UniRef50_C7RDU0 DNA polymerase I n=3 Tax=Anaerococcus RepID=C7RD... 114 4e-24 UniRef50_UPI0000DAED41 hypothetical protein Wendoof_01000149 n=1... 113 5e-24 UniRef50_Q6MEQ2 Probable DNA polymerase I n=1 Tax=Candidatus Pro... 113 5e-24 UniRef50_D1Y4U0 DNA polymerase I n=1 Tax=Pyramidobacter piscolen... 113 6e-24 UniRef50_Q89AD1 5'-3' exonuclease n=1 Tax=Buchnera aphidicola (B... 113 6e-24 UniRef50_B1YKA1 DNA polymerase I n=3 Tax=Bacilli RepID=B1YKA1_EXIS2 113 7e-24 UniRef50_A3EQ00 DNA polymerase I n=3 Tax=Leptospirillum RepID=A3... 113 7e-24 UniRef50_Q55971 DNA polymerase I n=13 Tax=Cyanobacteria RepID=DP... 113 7e-24 UniRef50_Q8EWK4 DNA polymerase I: 5'-3' exonuclease n=1 Tax=Myco... 113 7e-24 UniRef50_B0SCM1 DNA-directed DNA polymerase n=2 Tax=Leptospira b... 113 7e-24 UniRef50_B0KAJ0 DNA polymerase I n=12 Tax=Thermoanaerobacterales... 112 8e-24 UniRef50_A9BEU8 DNA polymerase I n=1 Tax=Petrotoga mobilis SJ95 ... 112 8e-24 UniRef50_D1B5M0 DNA polymerase I n=1 Tax=Thermanaerovibrio acida... 112 1e-23 UniRef50_D2RIE4 DNA polymerase I n=5 Tax=Clostridiales RepID=D2R... 112 1e-23 UniRef50_Q2GI23 DNA polymerase I n=6 Tax=Rickettsiales RepID=Q2G... 112 1e-23 UniRef50_Q21YU4 DNA polymerase I n=39 Tax=Betaproteobacteria Rep... 111 2e-23 UniRef50_A9ITV6 DNA polymerase I n=89 Tax=Proteobacteria RepID=A... 111 2e-23 UniRef50_B6G9J6 Putative uncharacterized protein n=2 Tax=Collins... 111 2e-23 UniRef50_C5RBK8 DNA polymerase I n=9 Tax=Lactobacillales RepID=C... 111 2e-23 UniRef50_D1AV04 DNA polymerase I n=1 Tax=Streptobacillus monilif... 111 2e-23 UniRef50_P52028 DNA polymerase I, thermostable n=18 Tax=Bacteria... 111 3e-23 UniRef50_P46835 DNA polymerase I n=51 Tax=Actinobacteridae RepID... 111 3e-23 UniRef50_Q14QK7 DNA polymerase I n=1 Tax=Spiroplasma citri RepID... 110 3e-23 UniRef50_B2GGW1 DNA polymerase I n=1 Tax=Kocuria rhizophila DC22... 110 3e-23 UniRef50_D2QFD0 DNA polymerase I n=3 Tax=Bacteria RepID=D2QFD0_9... 110 3e-23 UniRef50_B9M4P2 DNA polymerase I n=3 Tax=Deltaproteobacteria Rep... 110 4e-23 UniRef50_A9SI76 Predicted protein (Fragment) n=1 Tax=Physcomitre... 110 5e-23 UniRef50_B4U0B7 DNA polymerase I n=5 Tax=Streptococcus RepID=B4U... 110 6e-23 UniRef50_Q1LTX9 DNA polymerase I n=1 Tax=Baumannia cicadellinico... 110 6e-23 UniRef50_Q5HCC8 DNA polymerase I n=14 Tax=Rickettsiales RepID=Q5... 110 6e-23 UniRef50_UPI0001744922 DNA polymerase I n=1 Tax=Verrucomicrobium... 110 6e-23 UniRef50_Q2GBP7 DNA polymerase I n=10 Tax=Alphaproteobacteria Re... 109 8e-23 UniRef50_Q04G12 DNA polymerase I n=28 Tax=Lactobacillales RepID=... 109 9e-23 UniRef50_C6C0R6 DNA polymerase I n=3 Tax=Desulfovibrio RepID=C6C... 109 1e-22 UniRef50_B0PCZ2 DNA polymerase I n=3 Tax=Clostridiales RepID=B0P... 109 1e-22 UniRef50_B2RLP5 DNA polymerase I n=2 Tax=Porphyromonas gingivali... 109 1e-22 UniRef50_O08307 DNA polymerase I n=4 Tax=Chloroflexi (class) Rep... 108 1e-22 UniRef50_B5JW38 Exodeoxyribonuclease IX n=1 Tax=gamma proteobact... 108 2e-22 UniRef50_D1PTJ0 DNA-directed DNA polymerase I (Fragment) n=1 Tax... 108 2e-22 UniRef50_Q0F0N6 DNA polymerase I n=1 Tax=Mariprofundus ferrooxyd... 108 2e-22 UniRef50_A4RYY2 Predicted protein (Fragment) n=3 Tax=Mamiellales... 108 2e-22 UniRef50_A0YAX3 Exodeoxyribonuclease IX n=1 Tax=marine gamma pro... 108 2e-22 UniRef50_A8FKC7 DNA polymerase I n=20 Tax=Campylobacter RepID=A8... 108 2e-22 UniRef50_UPI00016BFC66 DNA polymerase I n=1 Tax=Epulopiscium sp.... 108 2e-22 UniRef50_UPI0001C32326 DNA polymerase I n=1 Tax=Conexibacter woe... 107 3e-22 UniRef50_A8USN7 DNA polymerase I 3'-5' exo domain n=1 Tax=Hydrog... 107 3e-22 UniRef50_A0JWM3 DNA polymerase I n=7 Tax=Actinobacteria (class) ... 107 4e-22 UniRef50_Q6X9S0 DNA polymerase I n=3 Tax=Bacillales RepID=Q6X9S0... 107 4e-22 UniRef50_C1N262 Predicted protein n=1 Tax=Micromonas pusilla CCM... 107 4e-22 UniRef50_A6TSU6 DNA polymerase I n=13 Tax=Clostridiaceae RepID=A... 107 5e-22 UniRef50_C1A095 DNA polymerase I n=60 Tax=Actinomycetales RepID=... 107 5e-22 UniRef50_B4S5F3 DNA polymerase I n=12 Tax=Chlorobiaceae RepID=B4... 106 6e-22 UniRef50_D0LQ66 DNA polymerase I n=1 Tax=Haliangium ochraceum DS... 106 6e-22 UniRef50_B1ZX82 5'-3' exonuclease n=3 Tax=Verrucomicrobia RepID=... 106 7e-22 UniRef50_D0L9T3 DNA polymerase I n=2 Tax=Corynebacterineae RepID... 106 8e-22 UniRef50_C1TPP4 DNA polymerase I n=2 Tax=Synergistaceae RepID=C1... 106 8e-22 UniRef50_Q67KY2 DNA polymerase I n=1 Tax=Symbiobacterium thermop... 105 9e-22 UniRef50_A9NF42 DNA polymerase I n=1 Tax=Acholeplasma laidlawii ... 105 1e-21 UniRef50_C2D755 DNA-directed DNA polymerase n=1 Tax=Atopobium va... 105 1e-21 UniRef50_C1SHV2 DNA polymerase I n=1 Tax=Denitrovibrio acetiphil... 105 1e-21 UniRef50_B9YEU0 DNA polymerase I n=2 Tax=Cyanobacteria RepID=B9Y... 105 1e-21 UniRef50_Q30VQ3 DNA polymerase I n=7 Tax=Desulfovibrionales RepI... 105 1e-21 UniRef50_A9G0B1 DNA polymerase I n=3 Tax=Sorangium cellulosum 'S... 105 1e-21 UniRef50_C5CBM1 DNA polymerase I n=2 Tax=Micrococcus luteus NCTC... 105 1e-21 UniRef50_A5EWG4 DNA polymerase I n=10 Tax=Gammaproteobacteria Re... 105 1e-21 UniRef50_B8H5J7 DNA polymerase I n=23 Tax=Alphaproteobacteria Re... 105 1e-21 UniRef50_B2TNM6 DNA polymerase I n=7 Tax=Clostridiales RepID=B2T... 105 1e-21 UniRef50_A8R8A1 DNA polymerase I n=2 Tax=unclassified Erysipelot... 105 1e-21 UniRef50_C7GEY2 DNA polymerase I n=6 Tax=Clostridiales RepID=C7G... 105 2e-21 UniRef50_A8SN89 DNA polymerase I n=2 Tax=Clostridiales Family XI... 105 2e-21 UniRef50_Q8D2U6 PolA protein n=1 Tax=Wigglesworthia glossinidia ... 105 2e-21 UniRef50_B0MR22 DNA polymerase I n=1 Tax=Eubacterium siraeum DSM... 105 2e-21 UniRef50_A5TW64 DNA-directed DNA polymerase I n=10 Tax=Fusobacte... 104 2e-21 UniRef50_Q30R59 DNA polymerase A n=6 Tax=Epsilonproteobacteria R... 104 2e-21 UniRef50_C9LLQ0 DNA polymerase I n=1 Tax=Dialister invisus DSM 1... 104 3e-21 UniRef50_B2A646 DNA polymerase I n=1 Tax=Natranaerobius thermoph... 104 4e-21 UniRef50_B8LLQ0 Putative uncharacterized protein n=1 Tax=Picea s... 103 4e-21 UniRef50_B6YQQ9 DNA polymerase I n=13 Tax=Bacteroidales RepID=B6... 103 4e-21 UniRef50_Q7VRJ4 DNA polymerase I n=3 Tax=Enterobacteriaceae RepI... 103 4e-21 UniRef50_B0KVB0 Putative 5'-3' exonuclease n=1 Tax=uncultured ca... 103 4e-21 UniRef50_P52027 DNA polymerase I n=4 Tax=Deinococci RepID=DPO1_D... 103 5e-21 UniRef50_A7NJD5 DNA polymerase I n=2 Tax=Roseiflexus RepID=A7NJD... 103 6e-21 UniRef50_A8MQG8 Uncharacterized protein At3g52050.3 n=15 Tax=Mag... 103 6e-21 UniRef50_C4LIB4 DNA polymerase I n=1 Tax=Corynebacterium kroppen... 103 6e-21 UniRef50_C8PHS8 DNA polymerase I n=2 Tax=Campylobacter RepID=C8P... 103 7e-21 UniRef50_B1VB35 DNA polymerase I n=1 Tax=Candidatus Phytoplasma ... 103 7e-21 UniRef50_Q98PK2 5'-3' exonuclease n=1 Tax=Mycoplasma pulmonis Re... 102 9e-21 UniRef50_B1WPN5 DNA polymerase I n=13 Tax=Bacteria RepID=B1WPN5_... 102 9e-21 UniRef50_C3WHF0 DNA polymerase I n=3 Tax=Fusobacterium RepID=C3W... 102 9e-21 UniRef50_D0RQG2 DNA polymerase I n=1 Tax=alpha proteobacterium H... 102 1e-20 UniRef50_Q9ZJE9 DNA polymerase I n=17 Tax=Helicobacter RepID=DPO... 102 1e-20 UniRef50_Q02DA6 DNA polymerase I n=1 Tax=Candidatus Solibacter u... 102 1e-20 UniRef50_B3PMZ8 5'-3' exonuclease, exo domain of DNA polymerase ... 102 1e-20 UniRef50_B2KCD2 DNA polymerase I n=1 Tax=Elusimicrobium minutum ... 101 2e-20 UniRef50_A7HJZ2 DNA polymerase I n=11 Tax=Bacteria RepID=A7HJZ2_... 101 3e-20 UniRef50_B3DZC7 5'-3' exonuclease n=1 Tax=Methylacidiphilum infe... 100 3e-20 UniRef50_Q21LK9 5'-3' exonuclease n=1 Tax=Saccharophagus degrada... 100 3e-20 UniRef50_C5BR48 5'-3' exonuclease n=1 Tax=Teredinibacter turnera... 100 3e-20 UniRef50_B7RUU1 5'-3' exonuclease, N-terminal resolvase-like dom... 100 3e-20 UniRef50_C4Z982 DNA polymerase I n=2 Tax=Clostridiales RepID=C4Z... 100 4e-20 UniRef50_Q2GD93 DNA polymerase I n=2 Tax=Neorickettsia RepID=Q2G... 100 4e-20 UniRef50_Q72ES3 DNA polymerase I n=3 Tax=Desulfovibrio vulgaris ... 100 4e-20 UniRef50_C7H3Z2 DNA polymerase I n=2 Tax=Ruminococcaceae RepID=C... 100 4e-20 UniRef50_D1R879 Putative uncharacterized protein n=1 Tax=Parachl... 100 4e-20 UniRef50_Q9HT80 DNA polymerase I n=9 Tax=Gammaproteobacteria Rep... 100 5e-20 UniRef50_C5B5M0 Putative uncharacterized protein n=1 Tax=Methylo... 100 5e-20 UniRef50_Q1YTV3 Exodeoxyribonuclease IX n=1 Tax=gamma proteobact... 100 6e-20 UniRef50_B9ZKF5 5'-3' exonuclease n=1 Tax=Thioalkalivibrio sp. K... 100 6e-20 UniRef50_D1BM52 DNA polymerase I n=6 Tax=Veillonellaceae RepID=D... 100 7e-20 UniRef50_C0ZE02 Putative 5'-3' exonuclease n=1 Tax=Brevibacillus... 100 7e-20 UniRef50_C7GZ50 DNA polymerase I n=1 Tax=Eubacterium saphenum AT... 100 8e-20 UniRef50_A7ILD7 5'-3' exonuclease n=1 Tax=Xanthobacter autotroph... 99 1e-19 UniRef50_C5CIW2 DNA polymerase I n=1 Tax=Kosmotoga olearia TBF 1... 99 1e-19 UniRef50_A8VW38 Amino acid-binding ACT domain protein n=1 Tax=Ba... 99 2e-19 UniRef50_A7HD60 DNA polymerase I n=2 Tax=Cystobacterineae RepID=... 99 2e-19 UniRef50_Q2JPZ4 DNA polymerase I n=3 Tax=Cyanobacteria RepID=Q2J... 99 2e-19 UniRef50_C2BWF0 DNA-directed DNA polymerase n=1 Tax=Mobiluncus c... 98 2e-19 UniRef50_UPI0001C17162 DNA polymerase A n=2 Tax=Nostocaceae RepI... 98 2e-19 UniRef50_Q11NX3 DNA polymerase I n=11 Tax=Bacteria RepID=Q11NX3_... 98 2e-19 UniRef50_A6G4C0 DNA polymerase I n=1 Tax=Plesiocystis pacifica S... 98 3e-19 UniRef50_Q3ABL3 DNA polymerase I n=1 Tax=Carboxydothermus hydrog... 98 3e-19 UniRef50_B5YG86 DNA polymerase I n=1 Tax=Thermodesulfovibrio yel... 98 3e-19 UniRef50_D0J9B5 DNA polymerase I n=2 Tax=Blattabacterium RepID=D... 98 3e-19 UniRef50_Q7NBN5 Exo n=1 Tax=Mycoplasma gallisepticum RepID=Q7NBN... 97 3e-19 UniRef50_B0MYJ0 Putative uncharacterized protein n=1 Tax=Alistip... 97 4e-19 UniRef50_UPI0001976BF8 DNA polymerase I n=1 Tax=Bifidobacterium ... 97 4e-19 UniRef50_B8FU82 DNA polymerase I n=2 Tax=Desulfitobacterium hafn... 97 6e-19 UniRef50_B9Y7P1 DNA polymerase I n=2 Tax=Erysipelotrichaceae Rep... 96 8e-19 UniRef50_D2RAL7 DNA-directed DNA polymerase n=2 Tax=Gardnerella ... 96 9e-19 UniRef50_D1J8K1 DNA polymerase I n=1 Tax=Mycoplasma hominis ATCC... 96 9e-19 UniRef50_Q1II21 DNA polymerase I n=2 Tax=Acidobacteria RepID=Q1I... 96 9e-19 UniRef50_D2NTK8 DNA polymerase I n=2 Tax=Rothia mucilaginosa Rep... 96 1e-18 UniRef50_A6KZN3 DNA polymerase I n=15 Tax=Bacteroides RepID=A6KZ... 96 1e-18 UniRef50_D0YSZ1 DNA polymerase I n=6 Tax=Actinobacteridae RepID=... 96 1e-18 UniRef50_C0E901 Putative uncharacterized protein (Fragment) n=2 ... 95 2e-18 UniRef50_B1HWJ8 Probable 5'-3' exonuclease n=2 Tax=Bacillaceae R... 95 2e-18 >UniRef50_B7LVW5 Uncharacterized exonuclease xni n=98 Tax=Enterobacteriaceae RepID=XNI_ESCF3 Length = 251 Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust. Identities = 241/251 (96%), Positives = 246/251 (98%) Query: 1 MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRH 60 MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTH VAVFDDENR+SGWRH Sbjct: 1 MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHVVAVFDDENRNSGWRH 60 Query: 61 QRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQ 120 QRLPDYKAGRPPMP+ELH+EMP LRAAFEQRGVPCWS +GNEADDLAATLAVKVTQAGHQ Sbjct: 61 QRLPDYKAGRPPMPDELHNEMPTLRAAFEQRGVPCWSATGNEADDLAATLAVKVTQAGHQ 120 Query: 121 ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVP 180 ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVP Sbjct: 121 ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVP 180 Query: 181 GVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHI 240 GVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLE HKEMAFLCRDIARLQTD+HI Sbjct: 181 GVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLEMHKEMAFLCRDIARLQTDVHI 240 Query: 241 DGNLQQLRLVR 251 DGNLQQLRL R Sbjct: 241 DGNLQQLRLKR 251 >UniRef50_B5FAT7 Uncharacterized exonuclease xni n=138 Tax=Gammaproteobacteria RepID=XNI_VIBFM Length = 262 Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 130/253 (51%), Positives = 179/253 (70%), Gaps = 6/253 (2%) Query: 1 MAVHLLIVDALNLIRRIHAVQGS-----PCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 MA+HL+I+DALNLIRR+H+ Q + + T +++++ ++PTH +AVFD + Sbjct: 1 MAIHLVIIDALNLIRRVHSAQPNQDDIQAVITTTTRTINKILKETEPTHIIAVFDHHLQD 60 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 GWR + LP YK R PMPE L M ++ A+ + G+ + G+EADDL ATLA KV Sbjct: 61 RGWRAEILPQYKEDRKPMPEALQKGMDDIQEAWWKLGIDSLLSDGDEADDLVATLANKVA 120 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 Q TI+STDKGYCQLLSPTLRIRDYFQ RWLDAPF++KEFG++P+QL DYWGLAGIS Sbjct: 121 VHNEQVTIISTDKGYCQLLSPTLRIRDYFQHRWLDAPFVEKEFGLKPEQLADYWGLAGIS 180 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQ 235 SSK+ G+ G+GPK+A ++L +F ++E E+ D + +K+RKK + H E A LCR +A L+ Sbjct: 181 SSKITGIPGVGPKAALEILTQFPTIEAANESED-LPKKYRKKFDEHYETAILCRQVAGLR 239 Query: 236 TDLHIDGNLQQLR 248 TD+ + NLQ +R Sbjct: 240 TDIELGFNLQDIR 252 >UniRef50_A0KHE3 Uncharacterized exonuclease xni n=3 Tax=Aeromonadaceae RepID=XNI_AERHH Length = 267 Score = 222 bits (566), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 118/256 (46%), Positives = 160/256 (62%), Gaps = 13/256 (5%) Query: 4 HLLIVDALNLIRRIHAVQGSPCVETCQ----------HALDQLIMHSQPTHAVAVFDDEN 53 HLLI+DALNLIRR+HAVQ + Q + +L+ S+PTH +AVFD E Sbjct: 7 HLLIIDALNLIRRLHAVQAQQALTPAQALIATRANLINTCRKLLAASEPTHVIAVFDGEV 66 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 S WR + P YK GR PMP EL + + L+ AF + GV + +EADDL ATLA Sbjct: 67 HS--WRKEVYPAYKEGRTPMPTELREGLNELQDAFWECGVDALLSQTDEADDLIATLATG 124 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 + Q G +ATI+STDKG+CQL+ P ++IRDYF KRWLDA F+++++GV P QL D+W L G Sbjct: 125 IAQHGARATIISTDKGFCQLICPQIQIRDYFNKRWLDAAFVEQQYGVAPAQLVDFWALTG 184 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDIA 232 I S + GV GIGPK+ATQLL ++ L + A K KL H++ A L + + Sbjct: 185 IGGSNIKGVPGIGPKTATQLLQQYGDLASLLAACQQEDAAKALLKLRQHQDEALLAQRLV 244 Query: 233 RLQTDLHIDGNLQQLR 248 RLQ D+ + NL+++R Sbjct: 245 RLQRDIPLGFNLREIR 260 >UniRef50_Q47YA8 Uncharacterized exonuclease xni n=1 Tax=Colwellia psychrerythraea 34H RepID=XNI_COLP3 Length = 290 Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 107/276 (38%), Positives = 163/276 (59%), Gaps = 32/276 (11%) Query: 1 MAVHLLIVDALNLIRRIHAVQGSPCVE-----------------------TCQHALDQLI 37 M+ HL+++DALNLIRR++AVQ P ++ TC +AL ++I Sbjct: 1 MSAHLILIDALNLIRRVYAVQERPFIQIKQDHDDELSASTLKQVLFNTQNTCVNALIKII 60 Query: 38 MHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWS 97 QPTHA+ VFD ++ WR+Q YK GR MP+ L +++ ++ AF ++GV + Sbjct: 61 DQHQPTHALTVFD--SQEPCWRYQLFEGYKKGRKKMPDHLANKLIDIQDAFMEQGVDSLT 118 Query: 98 TSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKE 157 + +EADDL ATLAVK+ G + TI+STDKG+ LLSP + I DYF +R+LD + + Sbjct: 119 SDEDEADDLIATLAVKMALHGQKVTIISTDKGFLPLLSPNIHIYDYFNRRYLDEEHVQSK 178 Query: 158 FGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENL---DAVAEKW 214 F V+ QL D+W L G +++K+ GV+GIG +A +LL ++ SL+ I E D++AEK Sbjct: 179 FSVKTSQLIDFWTLTGDNTNKIEGVSGIGQVTAAKLLNQYGSLKAILEATDLKDSLAEKL 238 Query: 215 RKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 + LE L R + L+ D+ + NL+ +RL Sbjct: 239 TQSLEQMD----LARKLLTLKQDIPLGFNLKDIRLT 270 >UniRef50_A1SYB8 Uncharacterized exonuclease xni n=2 Tax=Psychromonas RepID=XNI_PSYIN Length = 262 Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 103/258 (39%), Positives = 153/258 (59%), Gaps = 12/258 (4%) Query: 1 MAVHLLIVDALNLIRRIHAVQ-----GSPCV-----ETCQHALDQLIMHSQPTHAVAVFD 50 M LLI+DA+NL+RRI+AVQ +P T +AL +L+ QPTHA+ VFD Sbjct: 1 MISTLLIIDAMNLVRRIYAVQQKQHGDTPTALIATQSTTTNALKKLLRIHQPTHAICVFD 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + + WRHQ P+YK GR P+PE L +PA++ F G+ T +EADDL A L Sbjct: 61 --SHAPSWRHQIYPEYKQGRKPIPELLKQGLPAIQEQFFDLGIDSLVTEEDEADDLIACL 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 A K+ + + IVSTDKG+ QLL+ ++++ DYFQ ++ + ++ G+ QQL DYW Sbjct: 119 ADKIAKQQQKCIIVSTDKGFYQLLNESIQLYDYFQNSFVIRQQVHQKMGISIQQLNDYWA 178 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 + GISSS + GV GIG K A LL ++ SL I++ + K K+++ + A L + Sbjct: 179 ITGISSSAIKGVEGIGSKGALSLLQQYGSLNNIFQQAEDSNNKLLTKIKSQQSNAILAKQ 238 Query: 231 IARLQTDLHIDGNLQQLR 248 + L+TD+ + NL+ LR Sbjct: 239 LVTLKTDIKLGFNLKDLR 256 >UniRef50_Q3ICC5 Uncharacterized exonuclease xni n=3 Tax=Alteromonadales RepID=XNI_PSEHT Length = 257 Score = 189 bits (479), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 100/261 (38%), Positives = 152/261 (58%), Gaps = 17/261 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQGS------------PCVETCQHALDQLIMHSQPTHAVAV 48 M HLL++DALNLIRRI+AV + C HA +L+ ++ THA+AV Sbjct: 1 MKPHLLLIDALNLIRRIYAVDANQKHHSDEQMLKASCARVA-HACSKLLSSTKATHAIAV 59 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + WR+ DYK R PMP+ L D + +AA E+ G+ + +EADD+ A Sbjct: 60 FDGD---KSWRYHFYKDYKHSRAPMPQILKDALVQFKAAIEETGIVVFEPINDEADDIIA 116 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 TLA K + + IVSTDKG+ L+ + + DYF+K +LD I + FGV+ ++L ++ Sbjct: 117 TLANKASHNNISSVIVSTDKGFLPFLNEHIAVYDYFKKHYLDQDSIKQRFGVEQKKLVEF 176 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 W AG ++ +PGV GIG KSA L+ + S+E N DA++ RKKL + +M + Sbjct: 177 WAFAGDKTNDIPGVKGIGTKSAQLLVNNYSSVEDAL-NDDALSASLRKKLTENMDMYVIS 235 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 + + L+TD+++ +L+QLRL Sbjct: 236 KQLVSLRTDINLGFSLKQLRL 256 >UniRef50_A6VZB4 5'-3' exonuclease n=2 Tax=Marinomonas RepID=A6VZB4_MARMS Length = 263 Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/261 (39%), Positives = 150/261 (57%), Gaps = 12/261 (4%) Query: 1 MAVHLLIVDALNLIRRIHAV-----QGSPCVETCQ----HALDQLIMHSQPTHAVAVFDD 51 M LLI+D LNLIRR++A + +E Q AL +L P++AV VFD Sbjct: 1 MDKKLLIIDGLNLIRRLYAALESEQDSTRRIERTQSIAIEALAKLTHQFTPSYAVVVFDS 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ WRH+ P+YK GR PM + L + +P F +PC G EADDL ATLA Sbjct: 61 NGKT--WRHRVYPEYKLGRVPMDDTLLESLPDFAKVFRFNHLPCLRIDGWEADDLIATLA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIR-DYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 VK + ++ IVSTDKG+ QLL ++ DYF K D ++ ++GV+P+QL DYW Sbjct: 119 VKAANSNVKSYIVSTDKGFTQLLGNDRILQYDYFAKLGYDKIWVPGKYGVEPEQLTDYWA 178 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G +++++PGV GIGPK+A ++ F ++E IY NL + +E+ + L E L R Sbjct: 179 LVGDTTNRIPGVKGIGPKTALSIISLFPTVEEIYANLPSFSERIQSMLAGGYEQCLLSRS 238 Query: 231 IARLQTDLHIDGNLQQLRLVR 251 + L+TD+ I L QLR ++ Sbjct: 239 LVALKTDVEIGVRLSQLRYIK 259 >UniRef50_Q1N615 Exonuclease IX n=1 Tax=Bermanella marisrubri RepID=Q1N615_9GAMM Length = 263 Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 99/252 (39%), Positives = 144/252 (57%), Gaps = 8/252 (3%) Query: 5 LLIVDALNLIRRIHAVQGSP--CVETC----QHALDQLIMHSQPTHAVAVFDDENRSSGW 58 +L+ DA+NLIRRI+A Q VE Q+A+ + I H +P+H VFD +++ W Sbjct: 3 VLLFDAMNLIRRIYATQQDKPDGVENTLLLSQNAMLKDIEHFRPSHVACVFDGHSKT--W 60 Query: 59 RHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAG 118 RH P YKA R PMP++L +P FEQ G+ C EADD+ ATLAVK Q G Sbjct: 61 RHTIYPAYKANRNPMPKDLSAALPEFHRRFEQIGIRCLLYDYLEADDVIATLAVKSQQRG 120 Query: 119 HQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSK 178 IVSTDKGY Q++ + +F ++ L+ + G +P QL D+ L G S+++ Sbjct: 121 KSVCIVSTDKGYMQIMDEQTSLYHHFDRKQLNLDDVRSILGFEPSQLVDFLSLVGDSTNE 180 Query: 179 VPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDL 238 VPGV GIG K+A +LL +F L+ I + D ++ K ++LE H +A R + L+TD Sbjct: 181 VPGVDGIGQKTAGKLLDQFGDLDSILIHSDEISGKVGRQLENHFRIALRARKMVTLKTDC 240 Query: 239 HIDGNLQQLRLV 250 + NL+ LR + Sbjct: 241 ELAINLKGLRYL 252 >UniRef50_A4Y4Y4 Uncharacterized exonuclease xni n=21 Tax=Shewanella RepID=XNI_SHEPC Length = 262 Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 102/249 (40%), Positives = 142/249 (57%), Gaps = 8/249 (3%) Query: 5 LLIVDALNLIRRIHAV-----QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWR 59 LI+D LNL+RRI+A E A +L+ P+H V+D + S WR Sbjct: 4 FLIIDGLNLVRRIYAAIPDENDMESLKERVTSACTKLLRVHHPSHIAIVWDGDEIS--WR 61 Query: 60 HQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGH 119 Q PDYK GR PMPE L + AL+ + + EADD+ ATLAVK +A Sbjct: 62 KQLYPDYKKGRKPMPEPLAQGLRALQEHLATLNIASIYAAA-EADDVIATLAVKTAKAQG 120 Query: 120 QATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKV 179 +A IVSTDKG+ QL P + D+F +++LD ++++ GV Q D LAG S +K+ Sbjct: 121 EAIIVSTDKGFSQLNHPRITQWDHFNQQYLDIAALEQKLGVDRSQFLDLMALAGDSGNKI 180 Query: 180 PGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLH 239 PG+AGIGPKSA +LL F++L ++ +L + K KKL KEMA L +A+LQTDL Sbjct: 181 PGIAGIGPKSAAELLKTFRTLSTLFSSLPNLGAKQAKKLAEGKEMARLSYKLAQLQTDLP 240 Query: 240 IDGNLQQLR 248 ++ NL+ R Sbjct: 241 LNINLKDFR 249 >UniRef50_A2SN70 DNA polymerase I n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SN70_METPP Length = 265 Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 84/253 (33%), Positives = 128/253 (50%), Gaps = 10/253 (3%) Query: 5 LLIVDALNLIRRIH-AVQGS-------PCVETCQHALDQLIMHSQPTHAVAVFDDENRSS 56 LL++D +++RR++ AV G + H++ + + PTH +A FDD + Sbjct: 7 LLLLDGTSVVRRVYEAVPGDDGPARVDGAITASMHSIKRALGEHLPTHFLAAFDDGGPT- 65 Query: 57 GWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQ 116 WRHQ LP YK+ R PM E L +P L E G S G EADD+ T+A + Sbjct: 66 -WRHQLLPTYKSTRKPMYEGLRAALPRLYRDMESLGFSWVSPPGVEADDVIGTIAHRAAA 124 Query: 117 AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISS 176 G + IVS D C LLS +R+ ++F + W D ++ + G+ P Q+ Y GL G Sbjct: 125 RGFEVVIVSNDVDMCALLSANVRVYNHFAREWRDETWLASQIGITPAQVSAYIGLVGEEK 184 Query: 177 SKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQT 236 VPGVAG+GPK+A +LL + L+G+ + K ++L E L + + L+ Sbjct: 185 KSVPGVAGVGPKTAAKLLAQHGDLDGVLAAAAEMPGKIGERLRAGAEACRLSQALGTLKL 244 Query: 237 DLHIDGNLQQLRL 249 D+ + QL L Sbjct: 245 DVDLSIRPSQLAL 257 >UniRef50_C7MNN5 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID=C7MNN5_CRYCD Length = 885 Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 111/193 (57%), Gaps = 4/193 (2%) Query: 59 RHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAG 118 R L YKA RPPM ++L + P + G+P G E DD+ T+A + AG Sbjct: 67 RIAALEQYKAQRPPMDDDLRVQFPVVEQVLAAMGIPAVKVPGWEGDDILGTIAARGDAAG 126 Query: 119 HQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 + +V+ DK CQL S RI R D +++++GV P+Q+PD+ GL G Sbjct: 127 YDTLLVTGDKDACQLASDHTRIVNTKRGISDVVIFDPAGVEEKYGVSPEQIPDFLGLMGD 186 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARL 234 SS +PGV GIGPK+A +LL F S+EGIYE+LD + K ++ + +++ AFL RD+A + Sbjct: 187 SSDNIPGVPGIGPKTAAKLLQRFGSIEGIYEHLDELKGKQQESIRDNRDAAFLSRDVAII 246 Query: 235 QTDLHIDGNLQQL 247 + DL + +L+ L Sbjct: 247 KCDLDFELDLENL 259 >UniRef50_Q21SR9 5'-3' exonuclease n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SR9_RHOFD Length = 270 Score = 143 bits (360), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 127/242 (52%), Gaps = 11/242 (4%) Query: 5 LLIVDALNLIRRIHAVQGSP--------CVETCQHALDQLIMHSQPTHAVAVFDDENRSS 56 LLI+DALN+IRRIH P +++ + + + +PTHAVAVFD R+ Sbjct: 3 LLIIDALNIIRRIHEAIAEPDSEEKVADTIKSSLGSFKRALKTHRPTHAVAVFDHGGRT- 61 Query: 57 GWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK-VT 115 W+H Y+A R PMP+ L D + L+ G+ + G EADD A L K Sbjct: 62 -WKHDLYDGYQANRKPMPQPLRDGLLTLKRELHDMGLHWIAIEGIEADDAIAALVEKWCK 120 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 + QA I+STDK + QLL+ + I D+F++ W D+ ++ ++FGV P Q+ D L G + Sbjct: 121 YSAKQAIILSTDKDFLQLLNDQVCIYDHFKEVWRDSAYVQEKFGVTPSQMGDLLALMGDA 180 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQ 235 VPGV +G K+A LL +L+ + N D V + L E+A L R + + Sbjct: 181 VDGVPGVDKVGRKTAATLLRINGNLDRLISNADKVGGQVGANLRKGIEIARLSRQLVSFK 240 Query: 236 TD 237 TD Sbjct: 241 TD 242 >UniRef50_Q1NVM3 DNA polymerase A n=2 Tax=Deltaproteobacteria RepID=Q1NVM3_9DELT Length = 910 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 82/217 (37%), Positives = 120/217 (55%), Gaps = 3/217 (1%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L ++I + H VFD R +RHQ P YKA RP MPE+L ++P ++ Sbjct: 44 LLRVIREGEARHLAVVFD--ARGPNFRHQLYPQYKANRPAMPEDLACQLPYIKEIVAAYR 101 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAP 152 + G EADDL A ++ AGH+ IVS DK QL+ P + D R LDA Sbjct: 102 ITSLEREGFEADDLIAAAGRRLAAAGHRVVIVSGDKDLLQLVGPNITFWDPMGDRLLDAA 161 Query: 153 FIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-A 211 ++ ++ + P +L DY+ L G SS +PGV G+GPK+A +L+ EF L+ + NL+ V A Sbjct: 162 AVEAKYQLPPAKLLDYFALIGDSSDNIPGVPGVGPKTAVKLIKEFGDLDQLLANLEQVSA 221 Query: 212 EKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 K R+KL H++ A L R++ RL+ DL I ++ R Sbjct: 222 PKLRQKLADHRDAALLARELIRLKDDLEIPATPEEYR 258 >UniRef50_B0VJ17 DNA polymerase I n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ17_9BACT Length = 918 Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 82/251 (32%), Positives = 134/251 (53%), Gaps = 14/251 (5%) Query: 1 MAVHLLIVDALNLIRRIH-AVQGSPCVET----------CQHALDQLIMHSQPTHAVAVF 49 MA L ++D L+ R H A +P + + ++ ++ ++Q + F Sbjct: 1 MAEKLYLIDGTALLYRAHFAFIKNPLINSKGIHTSAIFGVINSFLHILENTQAAYVAISF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D ++ +RH YKA RPPMP+EL ++ ++ FE G+ G EADD+ T Sbjct: 61 D--RKAPTFRHNLYEAYKAQRPPMPDELTAQIEPVKRFFELIGLKEIGLDGYEADDILGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 LA K+ + Q +++DK YCQL+ + D + LD + ++GV P+Q DY Sbjct: 119 LA-KLYKDQFQIVFLTSDKDYCQLVDERSVMLDPMKDIVLDRDAVYAKYGVYPEQFIDYL 177 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G S +PGV+ IGPK+A LL E+Q+L+ IY NLD + + ++ L +KE A+L + Sbjct: 178 ALVGDPSDNIPGVSSIGPKTAAMLLSEYQTLDNIYANLDKLKPRLQEVLRENKENAYLSK 237 Query: 230 DIARLQTDLHI 240 +A++ TD+ I Sbjct: 238 QLAKIDTDVPI 248 >UniRef50_Q2LQV1 DNA polymerase I n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQV1_SYNAS Length = 901 Score = 139 bits (350), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 80/243 (32%), Positives = 125/243 (51%), Gaps = 5/243 (2%) Query: 10 ALNLIRRIHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYK 67 A IR + +G P V + L +L+ +P + FD + +RH+ YK Sbjct: 27 AFYAIRELSNSRGLPTNAVYGFTNMLIKLLRERKPEYIAITFD--LKGPTFRHETYAQYK 84 Query: 68 AGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTD 127 A R PE L ++P ++ +P G EADD+ TLA + G + IVS D Sbjct: 85 ATRKATPEALIPQIPYIKDIIRGFSIPILEQQGTEADDIIGTLACRFAGEGLKVIIVSGD 144 Query: 128 KGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGP 187 K QLLSP + + D R D + + FGV P+++P+ GL G S +PG+ GIGP Sbjct: 145 KDMLQLLSPDVIMIDTMNDRTYDVAAVRERFGVDPEKVPEILGLTGDMSDNIPGIPGIGP 204 Query: 188 KSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQ 246 K A +L+ E+ S+E I N++ + K R + + E A L RD+AR++T + + +L++ Sbjct: 205 KGALRLVEEYGSIEEILRNVERLRNPKLRDSVRVYGEQALLSRDLARIRTGIPLTFDLEE 264 Query: 247 LRL 249 RL Sbjct: 265 ARL 267 >UniRef50_A6G5W6 DNA polymerase I n=2 Tax=cellular organisms RepID=A6G5W6_9DELT Length = 933 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 91/253 (35%), Positives = 131/253 (51%), Gaps = 18/253 (7%) Query: 5 LLIVDALN-LIRRIHAV------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 + +VDA N L R HA+ G P V + + P H +AVFD S Sbjct: 1 MFLVDANNFLFRAYHALPMLTAPDGRPVNAVHGYVRMVQAIRKEFAPQHLLAVFDASG-S 59 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 GWR + +YKA RPP PE+L ++P +R A + +P EADDL A Sbjct: 60 KGWRRELYAEYKANRPPPPEDLQPQIPLVREATDALSIPWLEDPRYEADDLIARYVQAGV 119 Query: 116 QAGHQATIVSTDKGYCQLLSP-------TLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 +A + IVS+DK QL++ ++R+ D + R + + +FGV P++L D Sbjct: 120 EAKLEVVIVSSDKDLMQLVAGPDDVREGSVRLWDTMKNRRVGPAEVVAKFGVGPEKLGDL 179 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKK-LETHKEMAFL 227 LAG SS +PGV GIGPK+AT LL + LEGI N D + +K R++ LET+ E A + Sbjct: 180 LALAGDSSDNIPGVKGIGPKTATSLLETYGDLEGILSNTDKIKQKKRRENLETYAEDARM 239 Query: 228 CRDIARLQTDLHI 240 R + L+TD + Sbjct: 240 SRKLVALRTDYDL 252 >UniRef50_A1QZY0 DNA polymerase I n=1 Tax=Borrelia turicatae 91E135 RepID=A1QZY0_BORT9 Length = 919 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 134/258 (51%), Gaps = 16/258 (6%) Query: 5 LLIVDALNLI-RRIHAVQGSPCVETCQHALDQ----------LIMHSQPTHAVAVFDDEN 53 + ++DALN+I R H ++ +P ++ +I P + + FD E Sbjct: 4 IYLIDALNIIFRNYHVMKNNPLTNKKGENVNAFIGFFKTLFFIIKEKNPENLIVTFDSET 63 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R Q+ P YKA R P+ L ++ ++ + + +P + G EADDL A+ A K Sbjct: 64 QT--FRQQKYPSYKATRDAPPDNLIPQIYWIKESLIKANIPMFEIQGYEADDLIASFAKK 121 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW--LDAPFIDKEFGVQPQQLPDYWGL 171 + I+S DK QL+S +I + +D ++ K+FGV Q+ DY + Sbjct: 122 AEINNYLTYIISPDKDLLQLMSAKTKILKIENSSFVEMDNDYVMKKFGVNKSQIKDYLSI 181 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G S +PG+ GIG K A +LL EFQ+L GIY+NLD++ K+R+ L +E AFL ++ Sbjct: 182 VGDRSDNIPGIKGIGEKGAAKLLNEFQTLNGIYDNLDSINNKYREILLKERENAFLSYEL 241 Query: 232 ARLQTDLHIDGNLQQLRL 249 L DL + L++ +L Sbjct: 242 ISLVEDLELPA-LEKFKL 258 >UniRef50_C9RNE9 DNA polymerase I n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNE9_FIBSS Length = 972 Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 93/265 (35%), Positives = 138/265 (52%), Gaps = 25/265 (9%) Query: 5 LLIVDALNL-IRRIHAVQGSPCVETCQH----------ALDQLIMHSQPTHAVAVFDDEN 53 LL++D+ L R +A +P V + A+ +++ +PTH A+ D Sbjct: 6 LLLLDSFALAFRMFYAYSQNPLVNSKGEDVSMMHGYWGAVLRILAKHKPTH-FAIARDVA 64 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH+ PDYKA R PMPEE+ +MP L + E G+P S G EADD+ A+ A Sbjct: 65 HTKTFRHELYPDYKANRGPMPEEMAAQMPLLCESMEASGIPLLSEPGYEADDVMASAAEA 124 Query: 114 VTQAGH-QATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFID-------KEFGVQPQQL 165 AG I+S DK Q++ T +I + ++ D ID +++G+ P+++ Sbjct: 125 AVNAGFDHVVIISKDKDMSQIV--TDKIHLFHLEKGADG--IDFGPQQVLEKYGIPPEKI 180 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHKEM 224 DY L G SS VPGV +GPK+A QLL E+ ++ IY NLD + +K L +KE Sbjct: 181 RDYLALMGDSSDNVPGVPKVGPKTAIQLLTEYGDMDNIYANLDNIKKKGLHDNLANNKEQ 240 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 AFL R++ LQT GNL L Sbjct: 241 AFLSRELVTLQTKRAYHGNLDALEF 265 >UniRef50_A6FZM5 DNA polymerase I n=2 Tax=Deltaproteobacteria RepID=A6FZM5_9DELT Length = 898 Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 80/257 (31%), Positives = 132/257 (51%), Gaps = 12/257 (4%) Query: 4 HLLIVDALNLIRR-IHAVQGSPCVETCQHA---------LDQLIMHSQPTHAVAVFDDEN 53 L+++DA +LI R +A+ + H +++ QP VFD Sbjct: 6 RLILIDASSLIYRAYYAIPANFSTADGLHTNAIYGFATMFRKILSGRQPERGAVVFDAPG 65 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R ++ P+YKA RP M EL +++P + E P G EADD+ TL + Sbjct: 66 KT--FREEQYPEYKAQRPRMDPELREQLPWVDKLVEAHRFPHLRVPGYEADDIIGTLTRQ 123 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 AG + I+S DK + QL+ PT+R+ D + DA + K++GV P DY L G Sbjct: 124 AVDAGMEVYIISGDKDFAQLIGPTVRMIDTLRDVTFDAELVRKKWGVPPSLFIDYLALVG 183 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR 233 +PGV GIGPK+A +LL + LEG+ + + K +++LE + E A + + +A Sbjct: 184 DKVDNIPGVPGIGPKTAKKLLDAYGDLEGVLTHTSELKGKQKERLEDNAEQARMSQKLAT 243 Query: 234 LQTDLHIDGNLQQLRLV 250 + T + ++ L+ L+LV Sbjct: 244 IDTQVELELGLEDLKLV 260 >UniRef50_Q1RH76 DNA polymerase I n=18 Tax=Rickettsia RepID=DPO1_RICBR Length = 871 Score = 136 bits (343), Expect = 6e-31, Method: Composition-based stats. Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 12/253 (4%) Query: 5 LLIVDALNLIRRIHAVQ-------GSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 LL++D + R + Q G P + L +L+ +P HA VFD ++ Sbjct: 7 LLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFTSMLLKLLNDFKPKHAAVVFDSGGKN 66 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +RH+ P+YKA RPP PE+L ++P +R P +G EADD+ AT A K Sbjct: 67 --FRHEIYPEYKANRPPPPEDLIAQLPLVRDVARNLNFPILEKNGFEADDIIATFAAKTA 124 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 G + ++S+DK QL++ ++I D + +++ + ++FGV +L + L G Sbjct: 125 SIGEEVVVISSDKDLLQLMNDNVKIYDPLKAKYITEDNVVEKFGVTSDKLREVMALIGDK 184 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIARL 234 S +PGV IGPK+A+ L+ +F ++E I+ +L+ V+ K R+ L+ KE A + + L Sbjct: 185 SDNIPGVPSIGPKTASSLITQFGTVENIFNSLEQVSSIKQRETLQNSKEAALISWQLIGL 244 Query: 235 QTDLHIDGNLQQL 247 ++ +D L L Sbjct: 245 DYNVDMDFKLDAL 257 >UniRef50_B2V602 5'-3' exonuclease n=4 Tax=Hydrogenothermaceae RepID=B2V602_SULSY Length = 299 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 75/217 (34%), Positives = 122/217 (56%), Gaps = 4/217 (1%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L L + + P AVA FD ++ RH++ +YKA R P+ L ++P L+ + G Sbjct: 43 LKTLSVFNTPYVAVA-FDLPGKT--LRHEKFSEYKATRKETPDPLKQQIPILKEIIQLLG 99 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAP 152 + G EADD+ ATL+ K + G++A IV+ DK QL+S ++I + ++ LD Sbjct: 100 IKILEIPGYEADDIIATLSKKAEKEGYEAIIVTPDKDMNQLISDNIKIFNPVKEELLDKE 159 Query: 153 FIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE 212 I +++G+ PQQ DY + G + +PG+ GIGPK+A LL EF SLE I EN+D + Sbjct: 160 KIKEKYGIHPQQFIDYLTMIGDAVDNIPGIKGIGPKTAAALLQEFGSLENILENVDKLKG 219 Query: 213 KWRKKL-ETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 K ++ E KE ++I +L ++ I+ ++ L+ Sbjct: 220 KLKESFKELDKEQLQRMKEIIKLDANIEINIKIEDLK 256 >UniRef50_Q9RAA9 DNA polymerase I n=2 Tax=spotted fever group RepID=DPO1_RICFE Length = 922 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 128/253 (50%), Gaps = 12/253 (4%) Query: 5 LLIVDALNLIRRIHAVQ-------GSPCVETCQHA--LDQLIMHSQPTHAVAVFDDENRS 55 LL++D + R + Q G P A L +L+ +P H VFD ++ Sbjct: 7 LLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFASMLLKLLSDFKPKHVAVVFDSGGKN 66 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +RH P+YKA RPP PE+L ++P +R P +G EADD+ AT A K Sbjct: 67 --FRHHIYPEYKANRPPPPEDLVVQLPLVRDVASNLNFPILEKNGYEADDIIATFAAKTA 124 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 G ++S+DK QL+ ++I D + +++ + K+FG +L + L G Sbjct: 125 ALGEDVVVISSDKDLLQLMGENIKIYDPLKGKYITEDDVVKKFGTTSDKLREVMALIGDR 184 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIARL 234 S +PGV IGPK+A+ L+ +F S+E I+ +L+ V+ K R+ L+ KE A + + L Sbjct: 185 SDNIPGVPSIGPKTASSLITQFGSVENIFNSLEQVSSLKQRETLQNSKEAALISWQLIGL 244 Query: 235 QTDLHIDGNLQQL 247 +++ +D L L Sbjct: 245 DSNVDLDFQLNNL 257 >UniRef50_O51498 DNA polymerase I n=20 Tax=Borrelia RepID=DPO1_BORBU Length = 908 Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 80/249 (32%), Positives = 129/249 (51%), Gaps = 15/249 (6%) Query: 5 LLIVDALNLI-RRIHAVQGSPCVETCQHALDQ----------LIMHSQPTHAVAVFDDEN 53 L ++DALN+I R H ++ P + T ++ +I P H + FD E Sbjct: 4 LYLIDALNIIFRNYHVMKNYPLLNTQGENVNAFIGFFKTLFFIIKEKNPEHLIITFDSEV 63 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +R Q+ P YKA R P++L ++ ++ + +P + G EADDL A+ A K Sbjct: 64 PT--FRKQKYPSYKATRDLPPDDLIPQIGWIKEGLLKAKIPIFEMEGYEADDLLASFAKK 121 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW--LDAPFIDKEFGVQPQQLPDYWGL 171 + + I+S DK Q +S ++I + +D ++ K+FGV Q+ DY + Sbjct: 122 AAKNNYLTYIISPDKDLLQTMSEYVKILKIENNSFIEMDNEYVTKKFGVNSFQIKDYLAI 181 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G S +PG+ GIG K A LL EF++L+GIY NL+ + +K R+ L KE AFL ++ Sbjct: 182 VGDRSDNIPGIKGIGAKGAANLLREFKTLDGIYSNLEIINKKHRELLIKEKENAFLSYEL 241 Query: 232 ARLQTDLHI 240 L+ +L I Sbjct: 242 VSLEENLKI 250 >UniRef50_C1ZLA6 DNA polymerase I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZLA6_PLALI Length = 1031 Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 116/207 (56%), Gaps = 3/207 (1%) Query: 36 LIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPC 95 LI +PT + D + G R P+YKA R MPE+L ++P L+ FE G+P Sbjct: 136 LIEKQKPTWLICAMD--SPGPGIRESWYPEYKANRTEMPEDLRPQIPLLKEVFEAFGLPI 193 Query: 96 WSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFID 155 G EADD+ A+LA + + G IV+ DK QLL+P ++I + + W + + Sbjct: 194 IQQDGWEADDVLASLAAQFARHGTDVAIVTNDKDARQLLTPQIQIYNLRKMTWFNEASLL 253 Query: 156 KEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD-AVAEKW 214 +E+G++P Q+ D+ GL G + VPGV +GPK A LL +F++LEG+ + D A K Sbjct: 254 EEWGIRPDQVVDFQGLVGDAVDNVPGVPLVGPKKAAALLQQFETLEGVLAHADQAPGAKL 313 Query: 215 RKKLETHKEMAFLCRDIARLQTDLHID 241 ++ L+ E A L + + RL T+L +D Sbjct: 314 KENLKNFAEQARLSQKLVRLNTELQLD 340 >UniRef50_Q6X9Q9 DNA polymerase I n=1 Tax=Spirochaeta thermophila RepID=Q6X9Q9_9SPIO Length = 897 Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 83/259 (32%), Positives = 131/259 (50%), Gaps = 19/259 (7%) Query: 5 LLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L ++DA LI R + + + + L + + P + V D + Sbjct: 4 LFLIDAYGLIYRAYFALIRAPMRTKDGRNTSAIYGFFRMLFRFVKEYDPVYCGVVLD--S 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +R + YKA R PE+LH ++P + E G +G EADD+ TLA Sbjct: 62 LTPTFREKTFEAYKATRQKTPEDLHPQIPVIEEILEALGFATVRMNGFEADDVMGTLAAM 121 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 G +VS DK QL++ ++I +D F LD + +++GV+ Q+ D+ Sbjct: 122 AQAEGRPCFVVSGDKDLAQLVTKGVKIVRMDKDDFVV--LDEEGVKEKWGVRADQIVDFL 179 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G +S +PGV GIG K+A +LL E+ SLEG+Y +LD ++ R+KLE +E AFL R Sbjct: 180 ALVGDASDNIPGVEGIGEKTAQRLLAEYGSLEGVYAHLDELSPSLRRKLEEGRERAFLSR 239 Query: 230 DIARLQTDLHIDGNLQQLR 248 D+A ++TDL + + LR Sbjct: 240 DLATIRTDLDLSLTIGDLR 258 >UniRef50_A5IXV4 DNA polymerase I: 5' 3' exonuclease domain n=7 Tax=Mycoplasma RepID=A5IXV4_MYCAP Length = 305 Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 77/232 (33%), Positives = 119/232 (51%), Gaps = 11/232 (4%) Query: 26 VETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALR 85 V L +LI PTH FD + ++ RH+ DYKAGR PE + ++ + Sbjct: 45 VHVFFQTLFKLIKFYNPTHLFIAFDAKGKTK--RHEEYDDYKAGREKAPEIIFEQFDLAK 102 Query: 86 AAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPT-------L 138 + + G EADDL AT+A +Q + I S DK QL++ Sbjct: 103 KILSAMNIKWFEKVGYEADDLIATIAKHNSQFNNY--IYSKDKDLLQLVNQNNSIIKVVK 160 Query: 139 RIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQ 198 ++ ++ + + +G+ P Q+PDY GLAG SS K+ GVAGIGPK A LL EF Sbjct: 161 KVGNFTEYKLETVNEFADIYGINPNQIPDYKGLAGDSSDKLKGVAGIGPKKAISLLNEFG 220 Query: 199 SLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 +LE IYEN++ + K ++ LE E A C+ +A L + + +D N++ +++ Sbjct: 221 TLEAIYENINKITGKTKEYLENDCESAHFCKRLAILNSYVEMDTNIEDYKIM 272 >UniRef50_D1AJI6 DNA polymerase I n=2 Tax=Fusobacteriaceae RepID=D1AJI6_SEBTE Length = 885 Score = 133 bits (335), Expect = 5e-30, Method: Composition-based stats. Identities = 76/226 (33%), Positives = 125/226 (55%), Gaps = 10/226 (4%) Query: 31 HALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQ 90 + L+ +I P + VA D + RS R L +YKA R MPEEL ++P + + Sbjct: 39 NTLNLIIKEFSPDYLVACLDVK-RSELKRTSELTEYKAHREDMPEELVYQIPKIMEVLDA 97 Query: 91 RGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI--------RD 142 +P + G EADD+ ATLA K + ++ IV+ DK QL+ + I + Sbjct: 98 YNIPKYKVDGYEADDVIATLAKKFSDDNNEVFIVTGDKDLMQLIKDNINIALLGKGDGKS 157 Query: 143 YFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEG 202 F+ + ++ GV+P Q+ D +GL G S +PG+ GIGPK+ +L+ ++ +LE Sbjct: 158 QFKYIQTEQDVVEY-LGVRPDQVIDLFGLMGDKSDGIPGIQGIGPKTGVELISKYGNLET 216 Query: 203 IYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 +YEN++ + K ++KLE KE AFL R++A + DL ++ N ++L+ Sbjct: 217 LYENIEEIKGKRKEKLENEKENAFLSRELATVHMDLDVEYNKEKLK 262 >UniRef50_Q59156 DNA polymerase I n=6 Tax=Clostridia RepID=DPO1_ANATD Length = 850 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 75/216 (34%), Positives = 112/216 (51%), Gaps = 8/216 (3%) Query: 39 HSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWST 98 +P + FD R + R +YKA R PMP+ L ++P +R +P Sbjct: 46 QEKPDYVAVAFDKRGREA--RKSEYEEYKANRKPMPDNLQVQIPYVREILYAFNIPIIEF 103 Query: 99 SGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIR---DYFQKRWLDAPFID 155 G EADD+ +L + G I++ D+ QLL + ++ F K D ++ Sbjct: 104 EGYEADDVIGSLVNQFKNTGLDIVIITGDRDTLQLLDKNVVVKIVSTKFDKTVEDLYTVE 163 Query: 156 ---KEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE 212 +++GV Q+PDY L G S +PGV GIG KSA +LL E+ SLE IY+NLD + Sbjct: 164 NVKEKYGVWANQVPDYKALVGDQSDNIPGVKGIGEKSAQKLLEEYSSLEEIYQNLDKIKS 223 Query: 213 KWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 R+KLE K+MAFL + +A + DL ++ L+ LR Sbjct: 224 SIREKLEAGKDMAFLSKRLATIVCDLPLNVKLEDLR 259 >UniRef50_B5RMA2 DNA polymerase I n=2 Tax=Borrelia RepID=B5RMA2_BORDL Length = 922 Score = 132 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 80/258 (31%), Positives = 131/258 (50%), Gaps = 16/258 (6%) Query: 5 LLIVDALNLI-RRIHAVQGSPCVETCQHALDQ----------LIMHSQPTHAVAVFDDEN 53 + ++DALN+I R H ++ +P + + +I +P + + FD E Sbjct: 4 IYLIDALNIIFRNYHVMKNNPLTNSKGENVSAFIGFFKTLFFIIKEKKPENLIVTFDSET 63 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R ++ P YKA R P+ L ++ ++ + +P + G EADDL A+ K Sbjct: 64 QT--FRQKQYPSYKATRDAPPDNLIPQIHWIKEGLIKANIPMFELQGYEADDLIASFTKK 121 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDA--PFIDKEFGVQPQQLPDYWGL 171 Q + I+S DK QL+S +I +L+ ++ K+FG+ Q+ DY + Sbjct: 122 AEQNNYLTYIISPDKDLLQLISNQTKIFKIENSSFLEMNNDYVIKKFGINKSQIKDYLSI 181 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G S +PG+ GIG K A++LL EF +L GIYENL + K+R+ L KE AFL + Sbjct: 182 VGDPSDNIPGIKGIGQKGASKLLNEFHTLNGIYENLSLINNKYREILLREKENAFLSYKL 241 Query: 232 ARLQTDLHIDGNLQQLRL 249 L DL + +L+ RL Sbjct: 242 ISLVEDLELP-SLETFRL 258 >UniRef50_C8PRX0 DNA polymerase I n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PRX0_9SPIO Length = 951 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 122/220 (55%), Gaps = 5/220 (2%) Query: 32 ALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQR 91 +L ++ +P + +A FD +R+ +RH+ +YKA R PE+LH ++P + Sbjct: 47 SLAMILKTYRPRYFLAAFD--SRTPTFRHEWYSEYKATRDKTPEDLHAQIPHIEKILTAL 104 Query: 92 GVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDA 151 G+ C G EADD+ ATLA + Q G + I+S DK QL+ + + + L Sbjct: 105 GIACLRKDGFEADDIIATLARRSAQEGRRCVIISGDKDLAQLVGDFVSVLKPDKSEALAQ 164 Query: 152 PFIDK---EFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD 208 +++ +GV P Q+ DY L G S+ +PGV GIGPK+A +LL ++ +L+ +YE++D Sbjct: 165 CGVEEVKAHWGVAPAQMLDYLSLIGDSADNIPGVKGIGPKTAVKLLQDYGTLDAVYEHID 224 Query: 209 AVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 ++A +KKL K+ A+ + + L ++ I+G L R Sbjct: 225 SIAGAVQKKLAAGKDSAYFSKKLITLADNVPIEGTLDDYR 264 >UniRef50_Q7UI29 DNA polymerase I n=1 Tax=Rhodopirellula baltica RepID=Q7UI29_RHOBA Length = 1027 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 83/245 (33%), Positives = 136/245 (55%), Gaps = 12/245 (4%) Query: 5 LLIVDALNLIRRI-HAVQ------GSPCVETCQHALD--QLIMHSQPTHAVAVFDDENRS 55 +++VDA +LI ++ HA+ G P D +L+ P + +A FD + Sbjct: 130 VVVVDAHSLIYQVFHALPPMTSTGGLPVSAVYGFVGDMLELLSRKNPDYLIAAFDKSEVT 189 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +R++ P+YKA R MP+EL ++P +R A + G+ SG EADDL AT+A KV Sbjct: 190 --FRNELYPEYKANRDSMPDELRQQIPLIRQAIDAMGIGIIEQSGFEADDLLATVAAKVE 247 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 +AG + +V++DK QL+S +I + + + +DA + +G++P Q+ DY L G Sbjct: 248 EAGGRCLVVTSDKDCRQLISDQTKIYNIRKDQEIDAAELFGLWGIRPDQVVDYQALVGDP 307 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKK-LETHKEMAFLCRDIARL 234 VPG++ IGPK A QLL +LE I N ++++ K RK+ L +E A + R++ L Sbjct: 308 VDNVPGISLIGPKIAQQLLETHDTLEEILNNAESISGKKRKENLMNGREAAMMSRELVEL 367 Query: 235 QTDLH 239 + D+ Sbjct: 368 KRDVE 372 >UniRef50_Q04957 DNA polymerase I n=117 Tax=Firmicutes RepID=DPO1_BACCA Length = 877 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 122/221 (55%), Gaps = 9/221 (4%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L++++ +PTH + FD + +RH+ +YK GR P EL ++ P LR Sbjct: 42 LNKILAEEEPTHMLVAFD--AGKTTFRHEAFQEYKGGRQQTPPELSEQFPLLRELLRAYR 99 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLD-A 151 +P + EADD+ TLA + Q G + ++S D+ QL SP + + D +K D Sbjct: 100 IPAYELENYEADDIIGTLAARAEQEGFEVKVISGDRDLTQLASPHVTV-DITKKGITDIE 158 Query: 152 PF----IDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENL 207 P+ + +++G+ P+Q+ D GL G S +PGV GIG K+A +LL +F ++E + ++ Sbjct: 159 PYTPEAVREKYGLTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLRQFGTVENVLASI 218 Query: 208 DAV-AEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 D + EK ++ L H+EMA L + +A ++ D ++ +L + Sbjct: 219 DEIKGEKLKETLRQHREMALLSKKLAAIRRDAPVELSLDDI 259 >UniRef50_P74933 DNA polymerase I n=3 Tax=Bacteria RepID=DPO1_TREPA Length = 997 Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 127/248 (51%), Gaps = 16/248 (6%) Query: 5 LLIVDALNLI-RRIHAVQGSPCVETCQ----------HALDQLIMHSQPTHAVAVFDDEN 53 L ++DA LI R HA +P + +L L+ H +P + VAVFD + Sbjct: 7 LYLLDAYGLIYRSYHAFARAPLINDSGANVSAVYGFFRSLHTLLCHYRPRYFVAVFD--S 64 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH + P YKA R EL+ ++P + G+ G EADDL ATLA + Sbjct: 65 LTPTFRHVQYPAYKAKRDKTSAELYAQIPLIEEILCALGITVLRHDGFEADDLIATLAKR 124 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRI-RDYFQKRW--LDAPFIDKEFGVQPQQLPDYWG 170 V I+S+DK QL+ T+++ R +W DA ++ + + V P QL D + Sbjct: 125 VAAEHCHVVIISSDKDVLQLVCDTVQVLRLDIDHKWTCCDAAYVQQRWTVMPTQLLDLFS 184 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G SS VPGV GIGPK+A LL F +L+GIY + ++ E R K+ K+ AF R Sbjct: 185 LMGDSSDNVPGVRGIGPKTAAHLLHCFGTLDGIYRHTYSLKEALRTKIVCGKKDAFFSRS 244 Query: 231 IARLQTDL 238 + L+ D+ Sbjct: 245 LIELRDDV 252 >UniRef50_A5CDT3 DNA polymerase I n=2 Tax=Orientia tsutsugamushi RepID=A5CDT3_ORITB Length = 910 Score = 130 bits (327), Expect = 4e-29, Method: Composition-based stats. Identities = 73/214 (34%), Positives = 119/214 (55%), Gaps = 3/214 (1%) Query: 36 LIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPC 95 +I P + V VFD +RH+ P+YK+ RP +P EL + P +R + + Sbjct: 70 IISEFNPEYMVVVFD--TGLDNFRHKIYPEYKSHRPELPSELKIQFPLVREIVKYLNINT 127 Query: 96 WSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFID 155 G EADD+ A+LA K A + IVS+DK QL++ + I D +K+++ Sbjct: 128 IEMEGVEADDVIASLANKFGNASDEIIIVSSDKDLLQLVNNKVYIYDPIKKQYIREKETI 187 Query: 156 KEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KW 214 ++ GV+P Q+ D+ L G S +PG+ GIGPK+A +LL +F SL I N +A + Sbjct: 188 EKLGVRPSQVRDFLSLTGDVSDNIPGIPGIGPKTAIKLLEQFDSLNNILHNYANIASPRH 247 Query: 215 RKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 RK +E H+++A L + L+ DL+++ +++ LR Sbjct: 248 RKLIEEHRQLAELSWQLVGLKQDLNLNLSVENLR 281 >UniRef50_P43741 DNA polymerase I n=222 Tax=cellular organisms RepID=DPO1_HAEIN Length = 930 Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 84/261 (32%), Positives = 130/261 (49%), Gaps = 18/261 (6%) Query: 5 LLIVDALN-LIRRIHA------VQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 L++VD + L R HA G P + + L LI QPTH VFD + ++ Sbjct: 9 LVLVDGSSYLYRAFHAFPSLTNAAGEPTSAMYGVLNMLKSLISQVQPTHIAVVFDAKGKT 68 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +R + YK+ RPPMP++L ++ L G+P G EADD+ TLA++ + Sbjct: 69 --FRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEADDVIGTLALQAS 126 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 G + I + DK QL+ + + + LD + +++G+ P+ + DY L G S Sbjct: 127 SLGKKVLISTGDKDMAQLVDDNIMLINTMNNSLLDRKGVIEKYGIPPELIIDYLALMGDS 186 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-------KWRKKLETHKEMAFLC 228 + +PGVAG+G K+A LL S+ IY NL+ VAE K +KL K A L Sbjct: 187 ADNIPGVAGVGEKTALGLLQGIGSMAEIYANLEKVAELPIRGAKKLGEKLLAEKNNADLS 246 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 +A ++TD+ ++ QL L Sbjct: 247 YTLATIKTDVELNVTTDQLLL 267 >UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QY72_9DELT Length = 914 Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 85/248 (34%), Positives = 130/248 (52%), Gaps = 20/248 (8%) Query: 17 IHAVQGSPCVETCQHALDQLIMHS-QPTHAVAVFDD------------------ENRSSG 57 ++ + GS + HA+ L + QPTHAV F +++ Sbjct: 7 LYLIDGSAYIYRAYHAIRPLSNAAGQPTHAVYGFTTTLLRVIREKTPRYLAIAYDSKGPN 66 Query: 58 WRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQA 117 +RH+ P YKA RP MP +L ++P ++ + +G EADDL A A ++ Sbjct: 67 FRHEIYPAYKANRPEMPADLACQIPYIKEVVSAYHITTLEQAGVEADDLIAAAARRLAGP 126 Query: 118 GHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSS 177 IVS DK QL++ + + D Q ++D + K++ V PQQL DY+ L G SS Sbjct: 127 DQPLIIVSGDKDLLQLVNEWVTLWDPMQDTFMDPAAVAKKYQVSPQQLLDYFALIGDSSD 186 Query: 178 KVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDIARLQT 236 VPGV G+GPK+A +L+ +F SLE ++ NL+ V A K R+KL H++ A L R + RL+ Sbjct: 187 NVPGVPGVGPKTAAKLIDQFGSLEQLFANLEQVSAAKLREKLAAHRQDAQLARRLIRLKD 246 Query: 237 DLHIDGNL 244 DL + +L Sbjct: 247 DLELPTSL 254 >UniRef50_D2R075 DNA polymerase I n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R075_9PLAN Length = 966 Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/251 (31%), Positives = 134/251 (53%), Gaps = 5/251 (1%) Query: 4 HLLIVDALNLIRRIHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQ 61 H LI + + + + G P V+ + LI + + VA FD + S +RH Sbjct: 25 HSLIYQVFHAMPEMTSPSGQPVGAVQGFVRDMLDLIENRSAEYIVAAFD--HPSPTFRHT 82 Query: 62 RLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQA 121 +YK R MP +L ++P ++ + G+ S G EADD+ ATLA +V G + Sbjct: 83 MYENYKVHRDEMPGDLQSQIPIIQQFLDALGITQLSIPGFEADDILATLAKRVASDGGRC 142 Query: 122 TIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPG 181 +V++DK QL++ +++ + + D + +G++P Q+ D+ L G S VPG Sbjct: 143 LVVTSDKDCRQLINDRVQMLNLRKNEIFDDVALMATWGIRPDQVVDFQSLVGDSVDNVPG 202 Query: 182 VAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKK-LETHKEMAFLCRDIARLQTDLHI 240 V IGPK A +LL ++++LEG+ +N D V+ RK+ L+ ++ AFL RD+ RL+ D+ Sbjct: 203 VPLIGPKIAQELLAKYETLEGVLDNADQVSGAKRKENLKNFRDQAFLSRDLVRLKNDMEF 262 Query: 241 DGNLQQLRLVR 251 D + +R+ R Sbjct: 263 DLDWSSVRVGR 273 >UniRef50_Q252Y8 DNA polymerase I n=14 Tax=Chlamydiaceae RepID=Q252Y8_CHLFF Length = 869 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 19/259 (7%) Query: 5 LLIVDALNLIRRIH---------AVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 + I+DA + R + + +G+ V ++++LI P H VAVFD N Sbjct: 4 IFILDASGFVFRAYFALPDMKNSSGKGTQAVFGFIRSINKLIKEFSPNHMVAVFDGPNNK 63 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 R + DYK+ R E+L+ ++P ++ G+ G EADD+ A+++ Sbjct: 64 QS-RREIYADYKSNREKKEEDLYQQIPVVKEYCNLLGLSHLEVEGVEADDVIASVSKLAI 122 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKE-----FGVQPQQLPDYWG 170 G++ I + DK QL+SP + + + W D P ID+ +GV P ++PDY Sbjct: 123 AEGYEVCICTADKDLLQLVSPNVVVIN----PWKDQPPIDENGVVNIYGVPPCRIPDYLA 178 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G +S +PGV+G GPK A LL ++ S+EGI E+LD + K K++ L +D Sbjct: 179 LVGDTSDNIPGVSGCGPKKAAALLQKYHSVEGILEHLDELTGSTHKMFSEQKDILLLSKD 238 Query: 231 IARLQTDLHIDGNLQQLRL 249 +A L ++ + ++ L Sbjct: 239 LAVLNNNVPLPTEIKDLEF 257 >UniRef50_Q9F173 DNA polymerase I n=177 Tax=Proteobacteria RepID=DPO1_SALTY Length = 928 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 81/261 (31%), Positives = 134/261 (51%), Gaps = 18/261 (6%) Query: 5 LLIVDALN-LIRRIHAV------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 L++VD + L R HA G P + + L LIM QPTHA VFD + ++ Sbjct: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAVVFDAKGKT 68 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +R + YK+ RPPMP++L ++ L A + G+P + SG EADD+ TLA + Sbjct: 69 --FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 + G I + DK QL++P + + + L + ++GV P+ + D+ L G S Sbjct: 127 KVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFLALMGDS 186 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEMAFLC 228 S +PGV G+G K+A LL L+ +Y + + A+ KL +K++A+L Sbjct: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNKDVAYLS 246 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 +A ++TD+ ++ +QL + Sbjct: 247 YKLATIKTDVELELTCEQLEV 267 >UniRef50_D1AZX7 DNA polymerase I n=3 Tax=Campylobacterales RepID=D1AZX7_SULD5 Length = 885 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 71/195 (36%), Positives = 112/195 (57%), Gaps = 2/195 (1%) Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 +F +++ +RH+ P+YKA RP PEEL ++P + E+ G C+S G EADD+ Sbjct: 54 MFALDSKGKNFRHELDPNYKANRPEAPEELKKQLPVAISWIEKMGFKCYSEEGFEADDVI 113 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSP-TLRIRDYFQKRWLDAPFIDKEFGVQPQQLP 166 A+ + G + IV+ DK QL+ + I D +K +D+ ++FGV P ++ Sbjct: 114 ASAVKFAKRHGIKVRIVTHDKDLYQLIDDGRVVIYDPMKKIEIDSEKCFEKFGVYPDKIN 173 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMA 225 +Y L G ++ +PGV GIGPK A +LL +F S+E IY NL+ +A + + LE +E A Sbjct: 174 EYLSLVGDTADNIPGVKGIGPKGAKKLLDDFGSVENIYANLERIANPRSKSMLEEGRESA 233 Query: 226 FLCRDIARLQTDLHI 240 FL + + RL L+I Sbjct: 234 FLSKQLVRLDDSLNI 248 >UniRef50_C8W0H1 DNA polymerase I n=2 Tax=Clostridia RepID=C8W0H1_DESAS Length = 888 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/257 (31%), Positives = 127/257 (49%), Gaps = 19/257 (7%) Query: 5 LLIVDALNLIRR-IHAV------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 +L++D +LI R HA+ G P V + L +++ QP FD Sbjct: 14 ILVIDGNSLIHRAFHAIPLLSTADGLPTNAVYGFTNMLLKILNDIQPKWVTVAFDKS--K 71 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 + +R+Q +YKA R PEEL + ++ + G EADDL T+ K Sbjct: 72 TTFRNQEYSEYKAHRKATPEELRPQFSLVKDVLNALSIKWLEAEGYEADDLIGTIVKKAE 131 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL------DAPFIDKEFGVQPQQLPDYW 169 + I+S DK QL+S + R K+ + +A + ++FGV P Q+ DY Sbjct: 132 EEDADVVILSGDKDILQLVSD--KTRAILTKKGITEIEEYNAENVYRKFGVHPNQITDYK 189 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 GL G S +PGV GIGPK+AT+LL +F S+E I NLD + + R +E + E A L + Sbjct: 190 GLTGDPSDNIPGVPGIGPKTATKLLQDFDSVENILANLDKITSRARTLMENNSEQALLSK 249 Query: 230 DIARLQTDLHIDGNLQQ 246 +A + T++ + L+Q Sbjct: 250 RLATIITNVPVQITLEQ 266 >UniRef50_C0X9C1 Possible DNA polymerase I (Fragment) n=1 Tax=Enterococcus faecalis TX0104 RepID=C0X9C1_ENTFA Length = 428 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 127/244 (52%), Gaps = 10/244 (4%) Query: 12 NLIRRIHAVQG--SPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAG 69 N + R G + + + + ++ PTH + FD + +R + +YKAG Sbjct: 24 NSLERFKNKNGLHTNAIYAFNNMFENVMQKEMPTHVLVAFD--AGKTTFRTEFYSEYKAG 81 Query: 70 RPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKG 129 R P E ++MP +R E GV + EADD+ TLA KV + + ++S D+ Sbjct: 82 RSKTPGEFKEQMPYIRELLEGLGVKYYELPNYEADDIIGTLANKVDKDEYDVVVLSGDRD 141 Query: 130 YCQLLSPTLRIRDYFQ-----KRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAG 184 QL + T+++ + + + +K G+ P+Q+ D GLAG +S +PGV Sbjct: 142 LTQLATDTVKVDITVKGVSDIESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVTK 201 Query: 185 IGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIARLQTDLHIDGN 243 IG K+A +LL ++ S+EG+YEN+D + + K ++ L KE AFL + +A ++ + ++ N Sbjct: 202 IGEKTAIKLLKQYGSVEGVYENIDEMKKSKMKENLINDKEQAFLSKRLATIEVNAPVEVN 261 Query: 244 LQQL 247 ++ L Sbjct: 262 VEDL 265 >UniRef50_Q6KHF6 DNA polymerase I n=1 Tax=Mycoplasma mobile RepID=Q6KHF6_MYCMO Length = 295 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 74/235 (31%), Positives = 128/235 (54%), Gaps = 14/235 (5%) Query: 23 SPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMP 82 + V T + + +L+ PTH FD ++ +RH+ +YK+ R P+ L + Sbjct: 37 TNAVHTFINTIFKLLKELNPTHIFVAFDKPGKT--FRHEFFEEYKSKRQSTPDSLKVQFI 94 Query: 83 ALRAAFEQRGVPCW-STSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIR 141 ++ + + CW S EADDL AT K+ + + + S+DK QL++ + + Sbjct: 95 YIKRVLSKMRI-CWFEESLIEADDLIATWVSKINTSKDEVIVYSSDKDLLQLVAKNVSVI 153 Query: 142 DYFQKRWLDAPFIDKE------FGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLV 195 + K + ID E + P Q+PD+ LAG +S G++GIGPK+A LL Sbjct: 154 SKWDK---NEYVIDNENNFFERHSIFPNQIPDFKALAGDASDNYLGISGIGPKTAINLLS 210 Query: 196 EFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 EFQ +E +YENL + ++K ++ LE K+ AFL + IA+L+TD++++ +L+ ++L Sbjct: 211 EFQIIENLYENLANIKSKKVKEVLELEKDKAFLYKKIAKLKTDVNLNFSLEDIKL 265 >UniRef50_Q0AVE2 DNA polymerase I n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVE2_SYNWW Length = 866 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 79/259 (30%), Positives = 134/259 (51%), Gaps = 16/259 (6%) Query: 1 MAVHLLIVDALNLIRR-------IHAVQG--SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 MA +++D +L+ R +H G + V ++++ QPTH FD Sbjct: 1 MADKFILIDGNSLLYRAFYALPLLHNSAGVYTNGVYGFLTMFNRVLAEIQPTHIAVAFDK 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + S +R++ +YKA R PEEL + LR + G EADD+ TL+ Sbjct: 61 DR--STFRNELYSEYKANRSAPPEELGGQFQLLRDVLAALNIEYLEMQGYEADDIIGTLS 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPD 167 K + G + I++ D QL+S + + + + D + ++GV+P+++ + Sbjct: 119 KKAEEQGLKTVILTGDGDALQLVSEQVEVLLTKKGISEMELYDPQGVKDKWGVEPEKMVE 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAF 226 GL G +S +PGV G+GPK+A +L+ EF SLE +YENL V +K +KLE ++E AF Sbjct: 179 IKGLMGDASDNIPGVPGVGPKTAMKLVQEFTSLENLYENLPQVKGKKLVEKLEQNREQAF 238 Query: 227 LCRDIARLQTDLHIDGNLQ 245 L R +A + D+ +D +++ Sbjct: 239 LSRQLATINRDMELDFSIE 257 >UniRef50_C3XEZ4 DNA polymerase I n=3 Tax=Bacteria RepID=C3XEZ4_9HELI Length = 1102 Score = 127 bits (318), Expect = 4e-28, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 8/209 (3%) Query: 38 MHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWS 97 ++ + + +F E + R + P YKA R P++L ++P E+ G+P S Sbjct: 48 LYKEHKDSCIIFTLEGGGTNRRKEFYPQYKANRKESPQDLLAQLPVAIEWLEKMGLPTLS 107 Query: 98 TSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKE 157 G EADD ATLA + G++ I+S DK QL+S + I DY +K+ + ++ Sbjct: 108 LQGYEADDCIATLATLAKKDGYETQIISHDKDLYQLISEGIYIFDYAKKQAITQKECYEK 167 Query: 158 FGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDA-------- 209 FGV P Y + G SS VPG+ GIGPK A +L F+SLE +YE+++ Sbjct: 168 FGVLPNDFIMYQSIVGDSSDNVPGIKGIGPKGAQSILAHFKSLESLYESIEKDYENIVSL 227 Query: 210 VAEKWRKKLETHKEMAFLCRDIARLQTDL 238 + ++ ++ HKE AF+ R++ L+TDL Sbjct: 228 LGKRTAGLIKEHKEQAFISRNLVTLRTDL 256 >UniRef50_Q1AUF6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUF6_RUBXD Length = 843 Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 88/259 (33%), Positives = 132/259 (50%), Gaps = 26/259 (10%) Query: 16 RIHAVQGSPCVETCQHALDQLIMHSQ--PTHAVAVF---------DDENRSSG------- 57 R++ + G + +AL Q I S PT+A+ F DE G Sbjct: 13 RVYLIDGYSLLYRAFYALPQSIATSSGLPTNALYGFTSMVLKLLDSDEELGIGVVWDGGL 72 Query: 58 --WRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +R + P+YKA R MPEEL ++ L E +P G EADD+ AT++ ++ Sbjct: 73 PAFRTEVYPEYKAQRSAMPEELRVQLDHLDEILEAMNIPVVRVEGFEADDVLATVSRRLP 132 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + G + IV+ D+ QL+ +R+ R + + + +E+GV P+Q+PDY L Sbjct: 133 E-GVELYIVTGDQDAMQLVDGRVRVLRTTRGVSETKVYGRREVMEEYGVSPEQIPDYKAL 191 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRD 230 G S +PGV GIGPKSA LL F SLE +YE L+ V A R+KLE +E AFL Sbjct: 192 VGDPSDNIPGVRGIGPKSAAALLRRFGSLEALYERLEEVEARGTRRKLEEGRENAFLSLR 251 Query: 231 IARLQTDLHIDGNLQQLRL 249 +AR++ D + + ++LR Sbjct: 252 LARMRFDAPVQFDPERLRF 270 >UniRef50_Q65W28 PolA protein n=42 Tax=Bacteria RepID=Q65W28_MANSM Length = 965 Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 120/224 (53%), Gaps = 9/224 (4%) Query: 31 HALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQ 90 + L LI QP+H VFD + ++ +R + YK+ RPPMP++L ++ L Sbjct: 53 NMLKSLITQVQPSHIAVVFDAKGKT--FRDELFEQYKSHRPPMPDDLRKQIQPLHDIIRA 110 Query: 91 RGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLD 150 G+P S G EADD+ TLA++ + AG + I + DK QL+ + + + LD Sbjct: 111 LGIPLLSIEGVEADDVIGTLALQASSAGKKVLISTGDKDMAQLVDDNIMLINTMNNTLLD 170 Query: 151 APFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV 210 + +++G+ P+ + DY L G SS +PG++G+G K+A LL S+ IY NLD V Sbjct: 171 REGVIEKYGIPPELIIDYLALMGDSSDNIPGISGVGEKTALGLLQGIGSMAEIYANLDKV 230 Query: 211 AE---KWRKKL----ETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 A+ + KKL K A L +A ++TD+ +D N +QL Sbjct: 231 ADLPIRGAKKLGEKLAAAKADADLSYVLATIKTDVELDLNPEQL 274 >UniRef50_Q1QDQ1 DNA polymerase I n=24 Tax=cellular organisms RepID=Q1QDQ1_PSYCK Length = 988 Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 11/254 (4%) Query: 5 LLIVDALNLIRRIHAV-------QG--SPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 +L+ + L R HA+ QG + + +AL +L+ PTH FD +S Sbjct: 42 ILVDGSYYLFRTYHALPKTMQNSQGLVTNAIRGTLNALLKLMRRYHPTHMAVCFD--TKS 99 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +RH +YKA RP M EL +++P + G+P G EADD+ TLA + Sbjct: 100 PTFRHAMSEEYKANRPKMDIELAEQIPYIHRLVTALGIPLLRIEGAEADDIIGTLAYRAV 159 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 GH I + DK QL++ + + D F + D+ + ++FG+ P+Q+ D+ L G S Sbjct: 160 AEGHHVVISTGDKDMMQLINDCVILEDSFTGKMTDSAGVVEKFGINPEQMIDFLTLMGDS 219 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQ 235 S + GV GIG K+A LL E+ +++ + +N+ + + K L + + + +A + Sbjct: 220 SDGIKGVPGIGKKTAKDLLNEYGNIDNMLKNVANIKGRAGKNLLEYADDIPMNAQLATIV 279 Query: 236 TDLHIDGNLQQLRL 249 TDL + + Q L++ Sbjct: 280 TDLEVGQDWQDLKI 293 >UniRef50_D1CFH6 DNA polymerase I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFH6_THET1 Length = 930 Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 76/256 (29%), Positives = 131/256 (51%), Gaps = 19/256 (7%) Query: 2 AVHLLIVDALNLIRR-IHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 AV ++++DA +LI R HA+ + + + + L Q+I P FD Sbjct: 6 AVKVVLIDAYSLIYRAYHALPSDLATSKGEKTNAIYGFCNMLVQVINRENPDSIAVAFD- 64 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 +RH +YKA R PMP++L ++ +R +P + G EADD+ +LA Sbjct: 65 --VGKAFRHDEFVEYKAQRAPMPDDLQAQIGRVRQVIAAFDIPVYEVPGYEADDVIGSLA 122 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAP-FIDKEFGVQPQQLP 166 K++ GHQ IV+ DK + QL+S ++ + R F + + P + ++G P+ + Sbjct: 123 KKLSSQGHQVVIVTGDKDFLQLVSDSVSVVLPARGRFSEVQVYTPDLVRLQYGFDPRYIV 182 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMA 225 D+ L G +S +PGV G+G K+A L+ F SL+ I EN+D++ E+ R ++ H+ Sbjct: 183 DFKALMGDASDNIPGVPGVGEKTARSLIQTFGSLQNILENVDSIKPERIRNAIKEHQSQL 242 Query: 226 FLCRDIARLQTDLHID 241 +A + TD+ +D Sbjct: 243 IQNLRLATIVTDIDVD 258 >UniRef50_B3TC83 Putative DNA polymerase family A n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC83_9ZZZZ Length = 891 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 84/249 (33%), Positives = 131/249 (52%), Gaps = 17/249 (6%) Query: 5 LLIVDALN-LIRRIHAVQG--------SPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 L ++D N + R HA+ G + V L +L+ QP A FD + Sbjct: 7 LFLIDGNNQMYRAYHALHGLTGPDGRSTNAVYGFITMLRKLLSDQQPDLVAAAFD--LKG 64 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +RH+ DYKA R PMPE+L +++ + A GVP + +G EADD+ TLA + Sbjct: 65 PTFRHELAADYKATRRPMPEDLVEQVSWVHEACAALGVPVVTHAGFEADDVIGTLATQAV 124 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRI---RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 AG + +V+ DK + QL+ +R+ RD + W D + ++FGV+P Q+ D L Sbjct: 125 AAGLEVVVVTGDKDFFQLVGDRIRVFNPRD--EGAWYDDAGVLEKFGVRPDQVVDVLALM 182 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDI 231 G +S V GV GIG K A +LL +F SL+ + ++ D + +K+R L H + A R++ Sbjct: 183 GDASDNVKGVPGIGEKGARELLADFGSLDWLLDHADELPKKKYRTALTEHADNARRSREL 242 Query: 232 ARLQTDLHI 240 RL TD+ + Sbjct: 243 VRLVTDVPV 251 >UniRef50_C2MBR8 DNA polymerase type I n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MBR8_9PORP Length = 948 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 18/250 (7%) Query: 5 LLIVDALNLIRR-IHAVQGSPCVET----------CQHALDQLIMHSQPTHAVAVFDDEN 53 L ++DA LI R +A P V+ L +I +P + D Sbjct: 4 LYLLDAYALIYRAYYAFINRPLVDAQGRDTSALYGFASTLQDIIDKERPDYIAVAMDMPG 63 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH+ P+YKA RP PE + MP ++ + +P G EADDL TL+ + Sbjct: 64 GT--FRHKEYPEYKANRPETPETIRFSMPYIKELVQAYQIPLLGVEGYEADDLIGTLSRQ 121 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQ-PQQLPDY 168 +AG++ +V+ DK Y QL+ P ++ R L A I ++G++ P Q+ DY Sbjct: 122 AVEAGYEVRMVTPDKDYGQLVGPHAQMFAPQRTGSGFELLGAEEITAKYGIRYPLQMIDY 181 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 GL G SS VPG GIG +A +LL EF ++E IY +D V + KKL KE L Sbjct: 182 LGLVGDSSDNVPGCPGIGKVAAQRLLEEFDTIEDIYARIDQVKPTYAKKLLAAKEQTMLS 241 Query: 229 RDIARLQTDL 238 R + + TD+ Sbjct: 242 RHLVTIVTDV 251 >UniRef50_A9H4T5 DNA polymerase I n=43 Tax=Alphaproteobacteria RepID=A9H4T5_GLUDA Length = 943 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/245 (35%), Positives = 126/245 (51%), Gaps = 12/245 (4%) Query: 3 VHLLIVDALNLI-RRIHAV------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDEN 53 +HL++VD I R HA+ G+P V + L +L+ TH +FD Sbjct: 7 IHLILVDGSGFIFRAFHALPPMTAPDGTPVNAVFGFTNMLARLLRDHVGTHLAVIFDAGR 66 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +R+ YKA RP PEEL + +R A GVP +G EADDL A A Sbjct: 67 VT--FRNGIYDQYKAHRPEPPEELRPQFALVRDATAAFGVPGIEEAGWEADDLIAAYARL 124 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 VT AG + T+VS+DK QL+ P + + D +++ + ++ +FGV P ++ D L G Sbjct: 125 VTDAGGRCTVVSSDKDLMQLIRPGVEMLDPIRQKPIGPKEVEAKFGVTPDKVIDVQALIG 184 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLCRDIA 232 S VPGV GIGPK+A+ L+ E+ SL+ I + A+ K R L H E A L R + Sbjct: 185 DSVDNVPGVPGIGPKTASALIAEYGSLDAILDGAPAMKPSKRRDSLIEHAERARLSRVLV 244 Query: 233 RLQTD 237 L+ D Sbjct: 245 TLRED 249 >UniRef50_O67550 5'-3' exonuclease n=2 Tax=Aquificaceae RepID=EX53_AQUAE Length = 289 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 79/257 (30%), Positives = 128/257 (49%), Gaps = 16/257 (6%) Query: 5 LLIVDALNLIRR-------IHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 L I+D + + R + +G P + L LI +P + V VFD ++ Sbjct: 4 LYILDGSSFVYRSFFALPPLSTSKGFPTNAIYGFLRMLFSLIKKERPQYLVVVFDAPAKT 63 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 R + DYK RP P+ L ++P ++ + G+P G EADD+ A LA K + Sbjct: 64 K--REKIYADYKKQRPKAPDPLKVQIPVIKEILKLAGIPLLELPGYEADDVIAYLAEKFS 121 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 Q G + I S DK QL+S + + + + K+FGV+PQ++PDY L G Sbjct: 122 QKGFKVKIYSPDKDLLQLVSENVLVINPMNDEVFTKERVIKKFGVEPQKIPDYLALVGDK 181 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL-ETHKEMAFLCRDIARL 234 VPG+ G+GPK+A +L ++ S+E I +N EK++++ KE L + +L Sbjct: 182 VDNVPGIEGVGPKTAINILKKYGSVENILKNW----EKFQREFPRAKKEDLELSYKLVKL 237 Query: 235 QTDLHIDGNLQQLRLVR 251 TDL I+ + + L++ R Sbjct: 238 YTDLDIELSEEDLKIKR 254 >UniRef50_A1ASW3 DNA polymerase I n=12 Tax=Deltaproteobacteria RepID=A1ASW3_PELPD Length = 893 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 125/243 (51%), Gaps = 4/243 (1%) Query: 7 IVDALNLIRRIHAVQGSPC--VETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLP 64 I A IR + + G P + L +L+ QP H VFD + +R + P Sbjct: 16 IYRAYYAIRHLSSPTGHPTNTIYGFTQMLLKLLKEHQPRHVAVVFDVGRET--FRTELYP 73 Query: 65 DYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIV 124 DYKA R +P++L +M +R +P +G EADD+ LA + + G + IV Sbjct: 74 DYKANRAALPDDLRVQMGPIRDLVRAFNIPALELAGFEADDIIGCLAARFSATGGRVVIV 133 Query: 125 STDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAG 184 + DK Q+++ + + D +++ + + FGV+P+ + D GLAG +S +PGV G Sbjct: 134 TGDKDLMQIVTERVTLLDTMKEKRSAITDVIERFGVEPRLVTDILGLAGDASDNIPGVPG 193 Query: 185 IGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNL 244 IG K+A +L+ E+ SL+ + E V K +KL ++ A L R +A ++ D+ I L Sbjct: 194 IGEKTAMKLIREYGSLDQLLERASEVKGKNGEKLREFRDQALLSRRLATIRCDVPIQVEL 253 Query: 245 QQL 247 ++L Sbjct: 254 EEL 256 >UniRef50_Q9S1G2 DNA polymerase I n=25 Tax=Rhizobiales RepID=DPO1_RHILE Length = 1016 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 108/196 (55%), Gaps = 3/196 (1%) Query: 42 PTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGN 101 PTH +FD ++ +R YKA R PEEL + +R A +PC T G Sbjct: 78 PTHLAVIFDYSAKT--FRKDLYDAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGF 135 Query: 102 EADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQ 161 EADD+ AT A + G TIVS+DK QL+SP + + D + + + P + +++GV Sbjct: 136 EADDIIATYARQAEATGADVTIVSSDKDLMQLVSPNVHMYDSMKDKQIGIPDVIEKWGVP 195 Query: 162 PQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLET 220 P+++ D + G S VPG+ GIGPK+A QLL E+ L+ + E + + K R+ + Sbjct: 196 PEKMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQVKRRETILA 255 Query: 221 HKEMAFLCRDIARLQT 236 + +MA L RD+ RL+T Sbjct: 256 NIDMARLSRDLVRLRT 271 >UniRef50_A0LCQ8 DNA polymerase I n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LCQ8_MAGSM Length = 911 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 116/220 (52%), Gaps = 3/220 (1%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L ++I +P FD ++ +RH YKA R PMP+EL ++P + + Sbjct: 43 LRKVIEDEKPDFVTIAFD--TKAPTFRHTMDAQYKANRKPMPDELRVQIPVIHDVIDAFN 100 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAP 152 +P + G EADD+ T A AG + +VS DK QL++P +++ D + +W Sbjct: 101 IPRIALEGYEADDIIGTFARLGCAAGVEVVVVSGDKDLMQLITPQVKMFDGSKDKWYGPE 160 Query: 153 FIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE 212 + + +GV +++PD GLAG +S +PGV GIGPK+A QL+ EF SLEG+ + + + Sbjct: 161 DVVESWGVAAERIPDLLGLAGDTSDNIPGVGGIGPKTAAQLIAEFGSLEGVLHGAERIKQ 220 Query: 213 -KWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLVR 251 K R L + A +A + ++ + +LQ R+ R Sbjct: 221 PKRRTALLEQADTARRSLQLATINREVPLPFDLQGARMQR 260 >UniRef50_B6IUP1 DNA polymerase I, putative n=2 Tax=Alphaproteobacteria RepID=B6IUP1_RHOCS Length = 987 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 2/207 (0%) Query: 44 HAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEA 103 AVAV D R + +R++ PDYKA RP PE+L + +R A + +PC G EA Sbjct: 83 EAVAVIFDAKRLN-FRNEFYPDYKANRPEPPEDLRPQFAIIREAVDAFCLPCLELEGYEA 141 Query: 104 DDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQ 163 DDL AT A + G T+VS+DK QL+ +R+ D + R + + ++FGV P+ Sbjct: 142 DDLIATYARLAREQGRPVTVVSSDKDLMQLVRDGVRLMDPMKGRLIGPEEVAEKFGVPPE 201 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRK-KLETHK 222 ++ D LAG S VPGV GIG K+A QL+ E+ LE + E + + R+ KL + Sbjct: 202 KVVDVQALAGDSVDNVPGVPGIGVKTAAQLITEYGDLETLLERAGEIRQAGRRQKLLENA 261 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQLRL 249 E+A + + + RL + + L +LR+ Sbjct: 262 ELARISKRLVRLDDAVPVPVPLDRLRV 288 >UniRef50_C7N982 DNA polymerase I n=6 Tax=Leptotrichia RepID=C7N982_LEPBD Length = 1046 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 122/230 (53%), Gaps = 13/230 (5%) Query: 31 HALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQ 90 + L+ +I +P + VA D + R R L YKA R MPEEL ++ + + Sbjct: 39 NTLESVIREFRPDYLVACLDVK-RDELERTGELETYKAHRESMPEELVMQIDTIMKVLDG 97 Query: 91 RGVPCWSTSGNEADDLAATLAVKVTQAGHQAT---IVSTDKGYCQLLSPTLRI------- 140 +P + +G EADD+ AT A K + + +++ DK QL+ + I Sbjct: 98 YRIPKYKKAGQEADDVIATFATKFSNDADEQIEVFVITGDKDLTQLVDGKINIALLGKGD 157 Query: 141 -RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQS 199 F+ D ++ GV P ++PD +GL G S +PGVAGIGPK+ +L+ + + Sbjct: 158 KNSAFKHIKTDEDVVEY-LGVTPDKIPDLFGLMGDKSDGIPGVAGIGPKNGVKLITTYGN 216 Query: 200 LEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 LEGIYEN+D + K ++KL T KE AF+ R++A ++ +L ++ + +L+ Sbjct: 217 LEGIYENIDEIKGKQKEKLLTDKENAFISRELATVKRELDVEYDKNKLKF 266 >UniRef50_D0XR83 DNA polymerase I n=2 Tax=Alphaproteobacteria RepID=D0XR83_9CAUL Length = 994 Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 105/197 (53%), Gaps = 3/197 (1%) Query: 42 PTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGN 101 PTH A+FD ++ +R+ YKA R PE+L + P +R A GV C G Sbjct: 98 PTHLAAIFDHSEKT--FRNALYDQYKANRSAPPEDLVPQFPLVRDATRAFGVHCVELPGY 155 Query: 102 EADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQ 161 EADDL AT A KV AG + IVS+DK QL+ P++ + D + R L + ++FGV Sbjct: 156 EADDLIATYACKVRDAGGECVIVSSDKDLMQLIGPSVVMWDPMKDRRLAEDAVMEKFGVT 215 Query: 162 PQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLET 220 P ++ D L G S VPG GIGPK+A QLL E+ L+ + E + + K R+ L Sbjct: 216 PDKMIDLQALIGDSVDNVPGAPGIGPKTAAQLLDEYGDLDTLLERAGEIKQPKRRETLIN 275 Query: 221 HKEMAFLCRDIARLQTD 237 ++ L R + RL D Sbjct: 276 FRDQILLSRQLVRLTCD 292 >UniRef50_Q3Z6P9 DNA-directed DNA polymerase I n=5 Tax=Dehalococcoides RepID=Q3Z6P9_DEHE1 Length = 903 Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 67/198 (33%), Positives = 108/198 (54%), Gaps = 7/198 (3%) Query: 58 WRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQA 117 +RH+ YKA RPPMP+EL ++ +R + +P + SG EADD+ TLA + A Sbjct: 67 FRHEMFKAYKAQRPPMPDELVSQLGRVRQIVDAFNMPVYEQSGFEADDVLGTLATRAAAA 126 Query: 118 GHQATIVSTDKGYCQLLSPTLRI------RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 G + I S D QL+ P +RI + D + ++G+ P+ + DY L Sbjct: 127 GMEVIIASGDADSMQLVGPDIRILYPGPAGSFASTSLYDEVAVRAKYGLGPEHIADYKAL 186 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLCRD 230 G S +PGV GIGPK+A +L+ E+ +E IY+NLD ++ +KKL + E+A + Sbjct: 187 MGDPSDNIPGVPGIGPKTAQKLIEEYGGIEDIYKNLDKISPPGLQKKLADNAEVARDSKI 246 Query: 231 IARLQTDLHIDGNLQQLR 248 + + DL +D ++++ R Sbjct: 247 LTTIVCDLPLDFSIEECR 264 >UniRef50_A6DML3 DNA-directed DNA polymerase, DNA polimerase I protein n=3 Tax=Bacteria RepID=A6DML3_9BACT Length = 1036 Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 81/257 (31%), Positives = 135/257 (52%), Gaps = 18/257 (7%) Query: 5 LLIVDALNLIRR--------IHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENR 54 + ++D++ I R +H+ G P + ++ + +I P+H VAVFD Sbjct: 7 IFVIDSMAYIFRAFYGIRANMHSKDGLPTNALFGFINSFENIIRDFNPSHVVAVFD--AG 64 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 S +R++ +YKA R PEEL + ++ RG+P G EADD+ AT+A + Sbjct: 65 SETFRNEMYSEYKANRKECPEELKPQFDLVKEYIALRGIPLLIQKGFEADDIIATVAKQA 124 Query: 115 TQAGHQATIVSTDKGYCQLLSP-TLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 T + + I S DK QL++ TL + +DA + + GV+P Q+ DY + G Sbjct: 125 TGSHIKTVICSGDKDLMQLVNDDTLICHTHKNNLMIDAEKVVEIMGVRPDQIVDYLSICG 184 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE---MAFLCRD 230 S+ +PG+ GIGPK A +LL EF +LE I + D + K +K+ ET +E +A L + Sbjct: 185 DSADNIPGLPGIGPKGAAKLLAEFDNLETILASHDKI--KGKKQSETIREKADLATLSKS 242 Query: 231 IARLQTDLHIDGNLQQL 247 + LQ ++ +D + ++L Sbjct: 243 LVILQDEMTLDKSYEEL 259 >UniRef50_B1C859 DNA polymerase I n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C859_9FIRM Length = 888 Score = 123 bits (309), Expect = 5e-27, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 140/261 (53%), Gaps = 19/261 (7%) Query: 1 MAVHLLIVDALNLI-------RRIHAVQG--SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L+I+DA ++I R +H+ +G + V + + +LI +P + A FD Sbjct: 1 MKKKLVIIDAYSIIYKCFFGVRPMHSPKGISTNAVYGFLNIILKLISDEKPNYLYAAFDK 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 +++ +RH + DYKAGR MPEEL +++P + + + EADD+ +++ Sbjct: 61 GHKN--FRHDKYADYKAGRQSMPEELREQIPYIERLLDAANIISLKVDDYEADDIIGSVS 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL------DAPFIDKEFGVQPQQL 165 + G +++ D+ QL+S +I + KR + + ++ +++ + P+Q+ Sbjct: 119 EVADKEGIDTVVITGDRDSFQLVSEHTKI--LYSKRGISDIEVINEDYLKEKYNLTPKQM 176 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 D L G S +PGV G+G K+A LL ++ L+G+YE+++ + K ++KL K+ A Sbjct: 177 IDLKALMGDKSDNIPGVKGVGEKTALNLLEKYSDLDGVYEHIEEIKGKLQEKLINDKDNA 236 Query: 226 FLCRDIARLQTDLHIDGNLQQ 246 FL +D+ ++ ++ ID +L + Sbjct: 237 FLSKDLGTIEVNMDIDLDLNE 257 >UniRef50_A0LIP7 DNA polymerase I n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIP7_SYNFM Length = 902 Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 83/243 (34%), Positives = 123/243 (50%), Gaps = 6/243 (2%) Query: 7 IVDALNLIRRIHAVQGSPCVETCQHA--LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLP 64 I A + R+ +G P A LD+++ +P + VFD + +RH+ Sbjct: 17 IYRAYYAVSRLTNSRGFPTGAVLGFAQMLDKVVREKKPDYICVVFDAPGPT--FRHEMYA 74 Query: 65 DYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIV 124 YKA R PE++ ++P ++ RG+P G EADDL ATL + + +V Sbjct: 75 PYKATRQKAPEDMIAQIPYIKDLVRFRGIPQMELPGYEADDLIATLTHWAVEQDIEVVVV 134 Query: 125 STDKGYCQLLS-PTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVA 183 S+DK QL+ P +R D + R ++ +GV P ++ DY L G SS VPGV Sbjct: 135 SSDKDLHQLIDDPVVRQWDPQKDRVFMEWEVEDRYGVPPGRMVDYLALVGDSSDNVPGVK 194 Query: 184 GIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIARLQTDLHIDG 242 GIG K+A QLL E+ SL+ IY NL V R KLE H+E A L R + + D+ ++ Sbjct: 195 GIGDKTARQLLQEWGSLDRIYANLARVGSASVRDKLEKHREEALLSRRLVSFREDVPVER 254 Query: 243 NLQ 245 L+ Sbjct: 255 KLE 257 >UniRef50_C6XHK7 DNA polymerase I n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHK7_LIBAP Length = 976 Score = 123 bits (308), Expect = 6e-27, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 21/263 (7%) Query: 4 HLLIVDALNLIRRIHAVQGSPCVETCQHALD------------QLIMHSQ----PTHAVA 47 HL +VD + I R A +P + L +L+ +S+ +H Sbjct: 6 HLFLVDGSSFIYR--AFYATPLLSRKHDGLPVNAIAGFCNMLWKLLQNSRKESIASHFAV 63 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 +FD + +R++ PDYKA RP +PE L ++P +R A + G+P G EADD+ Sbjct: 64 IFDYP--AVTFRNEIYPDYKANRPKIPEMLLPQLPLVRLATQAFGIPAIEIQGFEADDII 121 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPD 167 AT + G TI+STDK QL+SPT + D ++ +D + K++G+ P+++ Sbjct: 122 ATYTYIAEKEGFAVTIISTDKDLMQLVSPTTCLYDTVKEEKIDIEHVIKKWGIPPEKMVC 181 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKK-LETHKEMAF 226 L G S +PG+ GIG K+A LL E+ +LE I N + +K R++ + + E A Sbjct: 182 LQALTGDSIDNIPGIPGIGYKTAALLLQEYGNLENILINASRIKQKKRRENILEYAETAR 241 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 L R + L+TD+ I L+ L L Sbjct: 242 LSRKLVMLRTDVPITIPLEHLIL 264 >UniRef50_Q1D7R1 DNA polymerase I n=4 Tax=Myxococcaceae RepID=Q1D7R1_MYXXD Length = 908 Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 128/253 (50%), Gaps = 12/253 (4%) Query: 5 LLIVDALNLI-RRIHAV---QGSPCVET-CQHALDQLIMHS----QPTHAVAVFDDENRS 55 L+++DA I R HA+ S V+T ++++ + +PTH FD E+R+ Sbjct: 13 LVLIDASGFIFRAYHAIPPLTTSKGVQTNAVLGFTRMVLKALRELKPTHVALAFDKESRT 72 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 R + P YKA R PE+L + +R E VP +G EADD+ TLAVK Sbjct: 73 E--RQKIDPTYKANREGPPEDLVPQFALIRRVVEAINVPVLEVAGWEADDVIGTLAVKAK 130 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 Q G +V+ DK + Q++ +R+ D + + G++P Q+ DY L G + Sbjct: 131 QEGFCVQVVTGDKDFVQIVDDDVRLYDPMKDVHTLPADVKARLGIEPGQMRDYLALIGDA 190 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIARL 234 VP V GIGPK+AT+L+ +F +E + LD V + K R+ + +H+E + + Sbjct: 191 VDNVPKVPGIGPKTATELIQQFGDVETLLSRLDEVKKPKIRENIASHRESLLRAKVLVTF 250 Query: 235 QTDLHIDGNLQQL 247 +TDL +D + L Sbjct: 251 KTDLSLDVRMADL 263 >UniRef50_Q6MPP6 DNA polymerase I n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPP6_BDEBA Length = 863 Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 5/250 (2%) Query: 3 VHLLIVDALNLIRRIHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRH 60 V + A IR + + G P V + +L+ +P + V +D + +R Sbjct: 9 VSAMFFRAFYAIRALSSPSGVPVNAVYGFLSMMIKLLKEEKPEYLVFCYD--RKEPSFRK 66 Query: 61 QRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQ 120 YKA R MP+EL ++P ++ + GVP + EADD+ TL + G + Sbjct: 67 TMYDGYKAHRTEMPDELAQQIPYIKRLADLLGVPAFEVESFEADDIIGTLTKWSRRNGME 126 Query: 121 ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVP 180 IVS DK + QL+ + + D + +A + +++GV+P Q DY + G +S VP Sbjct: 127 VFIVSGDKDFGQLIEDGVTLYDTMKGVRYNAEGVFEKWGVRPDQFIDYLAIVGDASDNVP 186 Query: 181 GVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHKEMAFLCRDIARLQTDLH 239 GV G+G K A +LL +F+ +E IYEN+D V K R+KL K+ A L + + + D+ Sbjct: 187 GVKGVGEKGAIKLLEQFKHVEDIYENIDKVESKSVREKLIASKDNALLSKKLVTISCDVP 246 Query: 240 IDGNLQQLRL 249 + +L+ +L Sbjct: 247 MPDDLEAYKL 256 >UniRef50_Q9PQ75 5'-3' exonuclease n=15 Tax=Ureaplasma RepID=EX53_UREPA Length = 289 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 118/233 (50%), Gaps = 9/233 (3%) Query: 23 SPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMP 82 + ++ + +++ Q T+ + D ++ +R Q YKA R PM +L ++P Sbjct: 35 TNAIKLVASMIFKILNQEQFTYGLIAMDASKQT--FRAQEYAAYKATRKPMDAKLIVQLP 92 Query: 83 ALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIR- 141 L+ F G S G EADD + + + + TI S+D+ QL++ +++ Sbjct: 93 YLKKLFVAMGFRIISQPGIEADDFVGSFSNLMNKFDVDTTIYSSDRDMLQLINKNTKLKL 152 Query: 142 -----DYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVE 196 Q+ L F G+ P Q+ +Y GL G SS + GV GIGPK+A LL++ Sbjct: 153 LKTGTSVMQEINL-TNFSLLNNGILPYQIIEYKGLVGDSSDNLIGVKGIGPKTAINLLLK 211 Query: 197 FQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 + ++E IY NL+ +A + KL HK+MAFL + +A +QTDL D L+ L Sbjct: 212 YDNIENIYTNLEKIAPSVKNKLIEHKDMAFLSKKLAAIQTDLLFDEKLENFVL 264 >UniRef50_D0WFK8 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID=D0WFK8_9ACTN Length = 905 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/255 (30%), Positives = 129/255 (50%), Gaps = 16/255 (6%) Query: 5 LLIVDALNLIRR--------IHAVQGSPCVETC--QHALDQLIMHSQPTHAVAVFDDENR 54 + ++D +L+ R ++AV G+P L + ++P V FD Sbjct: 5 IAVIDGNSLMHRAYHAVPPTMNAVDGTPTNAAFGFMSMLLKFYEDARPDAIVCAFDAGKP 64 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + R + + YKA RPPM +EL + P + + G+P G E DD+ T+A + Sbjct: 65 T--HRIEAMKAYKAQRPPMDDELRVQFPVIEGLLDAMGIPVVKVKGWEGDDILGTIAARD 122 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRI---RDYFQKRWLDAP-FIDKEFGVQPQQLPDYWG 170 G +V+ DK QL+S R+ R + P + + +GV Q PD+ G Sbjct: 123 EALGWNTLLVTGDKDAYQLVSDHTRVVTTRKGITDVVIYGPDEVLERYGVTAAQFPDFLG 182 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G ++ +PGV GIGPK+AT+LL + S++GIY+NLD + K + L +++ A+L RD Sbjct: 183 LQGDTADNIPGVPGIGPKTATKLLQAYGSMDGIYKNLDKLKGKQLQNLADNRDQAYLSRD 242 Query: 231 IARLQTDLHIDGNLQ 245 +A + DL + +L+ Sbjct: 243 LAVIVQDLDFELDLE 257 >UniRef50_Q8K9D0 5'-3' exonuclease n=4 Tax=Buchnera aphidicola RepID=EX53_BUCAP Length = 287 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/238 (28%), Positives = 127/238 (53%), Gaps = 14/238 (5%) Query: 19 AVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELH 78 A+ G ++T Q+ L++ + + +FD ++ +R+ +YK+ R MP +L+ Sbjct: 38 AIYG--MLKTIQNILNK---NYNSKKIIIIFDSSKKN--FRNTIFKEYKSNRSAMPNKLY 90 Query: 79 DEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTL 138 ++ L E+ G+ S G EADD+ +LA K+ Q G Q IVS DK QL++ + Sbjct: 91 VQIQPLFKILEEIGIKTLSILGIEADDIIGSLAYKLEQKGEQVLIVSHDKDMIQLITDNI 150 Query: 139 RIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQ 198 + + + L I +++G+ P++ D L G SS +PGV IG K+A LL +F Sbjct: 151 NVLNISKNSILTPEKIQEKYGIYPKEFIDLLALMGDSSDNIPGVPKIGIKTALFLLKKFS 210 Query: 199 SLEGIYENLDAV-------AEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 +++ IY N++ + A+ +L+ +K+ AFL +A+++ D+ I+ +++ L Sbjct: 211 NIKNIYNNIEKIQSLPFRNAKNAAIQLKNYKKTAFLSYQLAKIKLDVPINITSEEITL 268 >UniRef50_Q2S226 DNA polymerase I n=4 Tax=Rhodothermaceae RepID=Q2S226_SALRD Length = 926 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 23/255 (9%) Query: 5 LLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L ++DA++L R H + Q + ++L +LI HA VFD E Sbjct: 13 LYLIDAMSLAYRAHYIFISRPLINSKGQNTSAAYGFTNSLLKLIEDHDIEHAAVVFD-EG 71 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +R + DYKA R P PEEL + +P ++ E +P G EADD+ LA + Sbjct: 72 EEDTFRKEMYDDYKANRDPPPEELLENIPYIKEIVEGLDIPVLEVPGVEADDVIGALAKQ 131 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDK-------EFGVQPQQLP 166 IVS DK + QLLS + I ++ D F K E+G+ P Q Sbjct: 132 AEADDADVVIVSPDKDFKQLLSDKVSI---YKPAKGDQDFEIKTGDTFRDEYGLDPAQFV 188 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMA 225 D L G SS VPGV GIG K+A +LL E+ S+E + ++ D ++ ++ R+ ++ H E A Sbjct: 189 DMLALMGDSSDNVPGVYGIGEKTAQKLLREYHSVENLIDHADDLSGKRAREGMQEHAEEA 248 Query: 226 FLCRDIARLQTDLHI 240 L + + R++T+L + Sbjct: 249 RLSKRLVRIRTELDV 263 >UniRef50_Q04Q27 DNA-directed DNA polymerase n=4 Tax=Leptospira RepID=Q04Q27_LEPBJ Length = 921 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 72/217 (33%), Positives = 114/217 (52%), Gaps = 14/217 (6%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L +L+ PTH FD R + DYKA R PMPE+L ++ + E+ G Sbjct: 44 LFKLLQDYTPTHVAMTFDPGGPLE--RGKTFEDYKANRKPMPEDLRPQIKEVMETLEKIG 101 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPT----LR----IRDYF 144 G+EADD+ TL + I S DK QLL LR + ++ Sbjct: 102 FKVLKMEGHEADDIIGTLCETYRTIAKEILIFSGDKDLYQLLEKKNIKMLRGKKGVTEFV 161 Query: 145 QKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIY 204 + +D+ ++ +E G+ +Q+PDY G+ G +S +PGV GIG K A++LL E+++L+GIY Sbjct: 162 E---IDSAWVKEELGIDVKQIPDYMGIVGDTSDNIPGVKGIGDKGASKLLQEYKTLDGIY 218 Query: 205 ENLDAVAE-KWRKKLETHKEMAFLCRDIARLQTDLHI 240 +NL+ + + KL KE A+L + +A ++ DL + Sbjct: 219 KNLNKIKNPSIQTKLSEQKENAYLSKQLATIRRDLKL 255 >UniRef50_A6SUA5 5'-3' exonuclease n=3 Tax=cellular organisms RepID=A6SUA5_JANMA Length = 261 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 11/245 (4%) Query: 5 LLIVDALNLIRRIH--------AVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSS 56 LL +D LN++RR++ A + + + +L+ PTH + FD + Sbjct: 4 LLAIDGLNIVRRVYEANMEEDTAAKADAALRHSLASFRKLLNTHLPTHVLPAFDFGGHT- 62 Query: 57 GWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQ 116 WRH P Y+ R PMPE L + +P + G+ S EADD+ AT ++ Sbjct: 63 -WRHDLYPRYRENRAPMPEVLRERLPDFYVQLTELGLHVVSVPEVEADDVIATGVLRWLG 121 Query: 117 AGH-QATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 G +A I STDK L+ I D+F+ W D+ +++ +FGV P+ L D L G Sbjct: 122 EGRGEAIIASTDKDLHTLIEHGAVIWDHFKGEWHDSKWVESKFGVSPEMLTDLLALMGDV 181 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQ 235 S +PGV+ +G K+A +LL + +++ I + + +KL K+ ++ R + L+ Sbjct: 182 SDSIPGVSKVGVKTAAKLLQSYGNIDRIMAGAGILKDTLGEKLRKDKDQLYMSRQLVALK 241 Query: 236 TDLHI 240 D+ + Sbjct: 242 DDVRM 246 >UniRef50_A0PZF5 DNA polymerase I n=27 Tax=Clostridia RepID=A0PZF5_CLONN Length = 878 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 120/213 (56%), Gaps = 7/213 (3%) Query: 41 QPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSG 100 +P + V FD ++ +RH+ +YKAGR MP+EL+++ P ++ + + + G Sbjct: 51 KPDYIVTTFD--KKAPTFRHKEYEEYKAGRAKMPDELNEQFPIVKDILNKLAINIFEIEG 108 Query: 101 NEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDK 156 EADDL TL+ + G + IV+ D+ QL + +R+ + +K D + + Sbjct: 109 FEADDLIGTLSKFAEEKGIEVYIVTGDRDALQLATDNVRVVINKKGMSEKEIYDKNKMIE 168 Query: 157 EFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWR 215 E+GV P + D GL G S +PGV GIG K+A +L+ E+ S+E + EN++ ++ +K + Sbjct: 169 EYGVTPTEFIDVKGLMGDKSDNIPGVPGIGNKTALKLIKEYGSIENVLENVENISGKKMK 228 Query: 216 KKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 + L ++E A L + +A + D+ I+ NL +++ Sbjct: 229 QNLIDYREQAILSKKLATICKDVPIEINLDEIK 261 >UniRef50_B8D217 DNA polymerase I n=1 Tax=Halothermothrix orenii H 168 RepID=B8D217_HALOH Length = 870 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 121/224 (54%), Gaps = 11/224 (4%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L +L+ +P FD ++ +RH+ +YKA R MPEEL ++ ++ + Sbjct: 42 LLKLLDEEKPDLIAVAFD--KKAPTFRHKEYKEYKAHRKKMPEELKPQLSLIKEVLKSFS 99 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL--- 149 +P G EADD+ T+A K + G + IV+ D+ QL++ + + + KR + Sbjct: 100 IPIIEIEGFEADDIIGTMARKGEEEGFEVVIVTGDRDALQLVTEDVSV--MYTKRGISDI 157 Query: 150 ---DAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYEN 206 D + + + ++PQQL D GL G SS +PGV GIG K+A +LL EF SLE I +N Sbjct: 158 VRYDLNKVRERYELEPQQLIDMKGLMGDSSDNIPGVPGIGEKTAIKLLKEFSSLEEILDN 217 Query: 207 LDAVAEKWRKK-LETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 +D V+ K RK+ L+ + + A L + + ++ D+ +D L + L Sbjct: 218 IDKVSGKKRKENLQKYADQARLSKRLGEIKVDVPLDVELDECHL 261 >UniRef50_C7LZ56 DNA polymerase I n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ56_ACIFD Length = 886 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 113/222 (50%), Gaps = 7/222 (3%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L ++ ++PTH D E + +R L YK R P P++L ++ A R E G Sbjct: 54 LANVVAQTRPTHLAVALDAEGPT--FRDAILESYKGTRAPTPDDLRQQLDAARGLLEAIG 111 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK-----R 147 VP SG EADD+ ATLA + AG IV+ D+ QL+ L + +K Sbjct: 112 VPAVEASGFEADDVIATLATRARDAGIATRIVTGDRDLLQLVEDPLIVVLLTRKGVSNLE 171 Query: 148 WLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENL 207 D + + +GV P + D L G SS +PGV GIGPK+A LL F+S+EGI +L Sbjct: 172 AFDEAKVLETYGVPPARYGDLASLRGDSSDNLPGVPGIGPKTAAALLDRFESIEGILAHL 231 Query: 208 DAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 DA++ + R+ LE + R + +L+ D+ +L LRL Sbjct: 232 DALSARQREALEQARSQLLEARLLTQLRRDVAELPSLDALRL 273 >UniRef50_Q8H850 Putative uncharacterized protein OJ1626B05.7 n=1 Tax=Oryza sativa Japonica Group RepID=Q8H850_ORYSJ Length = 443 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 23/220 (10%) Query: 42 PTHAVAVFDDENRSSG-----------------WRHQRLPDYKAGRPPMPEELHDEMPAL 84 P+HA VFD + G +RH P YK+ R P P+ + M L Sbjct: 168 PSHAAVVFDHDGVPYGHYTAMPSKECHMAKGMTFRHMLYPSYKSNRIPTPDTIVQGMQYL 227 Query: 85 RAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI---- 140 +A+ + + G EADD+ TLAV AG++ IVS DK + Q+LSP+LR+ Sbjct: 228 KASIKAMSIKVIEVPGVEADDVIGTLAVSSVSAGYKVRIVSPDKDFFQILSPSLRLLRIA 287 Query: 141 -RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQS 199 R + F+ + ++P Q D L+G + +PGV GIG +A +L+ +F S Sbjct: 288 PRGSGMVSFGVEDFVKRYGALKPSQFVDVVALSGDKADNIPGVEGIGDINAVKLITKFGS 347 Query: 200 LEGIYENLDAV-AEKWRKKLETHKEMAFLCRDIARLQTDL 238 LE + +++D V E+ ++ L + E A LC+ +A L++DL Sbjct: 348 LENLLKSVDEVEEERIKQALISQSEQAMLCKSLATLRSDL 387 >UniRef50_B9L837 DNA polymerase I n=2 Tax=Nautiliaceae RepID=B9L837_NAUPA Length = 872 Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 1/199 (0%) Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 D +R + DYKA RP PE+L ++P + G G E+DD+ A+L Sbjct: 57 DSKEKDTFRKEIFKDYKANRPEAPEDLKTQLPVAIELINEMGFKMLEIPGYESDDIIASL 116 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSP-TLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 A G + IVS DK QL+ + I D +K ++ ++FGV P+ ++ Sbjct: 117 AKLAASQGIKVKIVSHDKDMYQLIDDDKIVIFDPIKKVEINEAKCIEKFGVHPKDFINFQ 176 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G SS +PGV G+G K+A +L+ ++++LE +Y+++D + +KKL KE AFL R Sbjct: 177 ALVGDSSDNIPGVKGVGVKTAAKLINQYKTLENLYDHIDEIKGALQKKLLADKENAFLSR 236 Query: 230 DIARLQTDLHIDGNLQQLR 248 ++ L+TDL + NL++ + Sbjct: 237 ELVTLKTDLFDNINLEEFK 255 >UniRef50_C7HT94 DNA polymerase I n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HT94_9FIRM Length = 893 Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats. Identities = 65/214 (30%), Positives = 116/214 (54%), Gaps = 7/214 (3%) Query: 41 QPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSG 100 +P + + FD + ++ +RH+ DYKA R P EL+ + L+ + V G Sbjct: 64 KPDYILVAFDKKTKT--FRHKEFEDYKANRDKAPNELNYQFGILKDILDSLNVKYLDIDG 121 Query: 101 NEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDK 156 EADD+ T + + G + I++ DK Y QL++ + + + Q + I+ Sbjct: 122 YEADDIVGTFSTIAKEEGLETVIITGDKDYFQLVNDKVVVFLTRKGISQMEEITVKSIED 181 Query: 157 EFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWR 215 ++G+ P+QL D GL G S +PGV GIG K+A + + ++ S+EG+YENLD + +K + Sbjct: 182 DYGLSPKQLIDVKGLMGDKSDNIPGVDGIGEKTAIKFIKKYGSMEGLYENLDDIKGKKTK 241 Query: 216 KKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 + LE K++AFL + I + T+ + + +L++ Sbjct: 242 ENLENSKQIAFLSKKIGTIVTNAPVGMKISELKV 275 >UniRef50_UPI0001BC5C75 DNA polymerase I n=3 Tax=Fusobacterium RepID=UPI0001BC5C75 Length = 894 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 75/228 (32%), Positives = 125/228 (54%), Gaps = 15/228 (6%) Query: 32 ALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQR 91 +L QL+ + + A FD + RS R + +YK+ R PE+L ++P + A + Sbjct: 39 SLFQLLKEYESEYMAAAFDIK-RSHLKRTELYAEYKSNRDTTPEDLVKQIPYIEAILDAF 97 Query: 92 GVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKR 147 G+ G EADD+ +L+ K+++ G TIV+ DK QLL I ++ + R Sbjct: 98 GIQRIKIDGYEADDILGSLSTKLSKKGIPVTIVTGDKDISQLLDENTEIYLLGKEVLKTR 157 Query: 148 WLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENL 207 +ID V P+++PD +GL G SS +PGV IGPK A +L ++ +LEGIYEN+ Sbjct: 158 EDVKNYID----VYPEKIPDLFGLIGDSSDCIPGVRKIGPKKAVPMLEKYGNLEGIYENI 213 Query: 208 DAVAE------KWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 D ++E + ++ KE+AFL R +A+++ +L +L++L+ Sbjct: 214 DKLSELPGVGKTLIQIMKEDKELAFLSRSLAKIERNLDFPFSLEELQF 261 >UniRef50_C3U0N1 Truncated DNA polymerase I n=1 Tax=uncultured bacterium RepID=C3U0N1_9BACT Length = 557 Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 19/266 (7%) Query: 1 MAVHLLIVDALNLIRR-IHAVQGSPCVET----------CQHALDQLIMHSQPTHAVAVF 49 M L ++DA+ LI R +A+ SP + + L LI +PTH F Sbjct: 1 MPKKLFLLDAMALIYRAYYALIRSPRITSKGRNTNAQFGFTSTLIDLINKEKPTHLAVCF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D E ++ RH +YKA R PE+L +P ++ +P G EADD+ T Sbjct: 61 DTE--AATERHTDFAEYKANRQAAPEDLISALPDIKKIITAFNIPVVELDGYEADDVIGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLL--SPTLRIRDYFQ---KRWLDAPFIDKEFGVQ-PQ 163 LA + G++ +V+ DK Y QLL + + +Q + LDA I +++G++ Sbjct: 119 LAWQAADKGYEVFMVTPDKDYGQLLIHNNVFIYKPPYQGGKEDILDAKKICEKWGIERVD 178 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 Q+ D GL G + +PG+AGIG K+A +LL EF +LE I N D + +K+ KE Sbjct: 179 QVVDMLGLMGDAVDNIPGIAGIGEKTACKLLKEFDNLENILANADNIKGAVGEKIRNGKE 238 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRL 249 A + + +AR+ TD+ + + + RL Sbjct: 239 AALMSKKLARIITDVPVQFHEEDYRL 264 >UniRef50_C5B5N3 DNA polymerase I n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5N3_METEA Length = 957 Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 84/214 (39%), Positives = 108/214 (50%), Gaps = 15/214 (7%) Query: 42 PTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGN 101 PTH VFD +R S R Q P+YKA R P +L +MP +R A G+P Sbjct: 69 PTHLGIVFDKGSRES-HRRQLYPEYKANRSETPADLRPQMPLVREAVRAFGLPVIELDRT 127 Query: 102 EADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRD----------YFQKRWLDA 151 EADDL AT A G + IVS DK QL+SP +R D Y +R LD Sbjct: 128 EADDLIATYARAAEAKGAEVVIVSADKDLQQLVSPRIRFYDAESGSKGKPGYRPERNLDV 187 Query: 152 -PFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV 210 + K G+QP Q+ D L G +S +PGV GIG K+A QLL+E+ SLE + E A+ Sbjct: 188 EAVVAKWEGLQPGQIGDALALIGDTSDNIPGVPGIGLKTAAQLLLEYGSLEALLEGASAI 247 Query: 211 AE-KWRKKLETHKEMAFLCRDIARL--QTDLHID 241 + K R+ L E A L R + L DL +D Sbjct: 248 KQPKRRENLLAAAEGARLSRRLVELDCSVDLPVD 281 >UniRef50_B6R626 DNA polymerase I superfamily protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R626_9RHOB Length = 980 Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 112/202 (55%), Gaps = 3/202 (1%) Query: 41 QPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSG 100 +PTH +FD ++ +R+ P+YKA RPP PE+L + +R A GVP G Sbjct: 73 EPTHFAVIFDKSGKT--FRNDFYPEYKAHRPPPPEDLRPQFGLIRQATRAFGVPAIEQQG 130 Query: 101 NEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGV 160 EADDL AT A + G + TIVS DK QL++ + + D + + + P + ++FGV Sbjct: 131 YEADDLIATYARQAEAQGARVTIVSGDKDLMQLVTDKIGMVDTMKNKIIGKPEVFEKFGV 190 Query: 161 QPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKK-LE 219 P+++ + LAG S VPGV GIG K+A L+ EF L+ + E + + +K R++ L Sbjct: 191 GPEKVVEVQSLAGDSVDNVPGVPGIGLKTAALLINEFGDLDTLLEQAETIKQKKRRENLI 250 Query: 220 THKEMAFLCRDIARLQTDLHID 241 E A + + + +L+ + ++ Sbjct: 251 EFAEQARISKRLVQLEEAVPVE 272 >UniRef50_Q4JW27 DNA polymerase I n=2 Tax=Corynebacterium jeikeium RepID=Q4JW27_CORJK Length = 859 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 6/216 (2%) Query: 36 LIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPC 95 L+ QPTH A FD + +R + P+YKA RP PEE ++ +R E GV Sbjct: 46 LMDKEQPTHVAAAFDLSGPT--FREESFPEYKAQRPSTPEEFKGQIELIRRTLEALGVTT 103 Query: 96 WSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDA 151 EADD+ ATLA + + G I + D+ QL++ + + + + Sbjct: 104 LDKESYEADDIIATLATEGAKDGMDVLICTGDRDSLQLVTEDVTVLYTLKGVSELHRFTP 163 Query: 152 PFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA 211 +++++GV P Q PD L G +S +PGV G+GPK+A + + ++ SL+G+ +N+D + Sbjct: 164 QAVEEKYGVTPTQYPDLAALRGDTSDNMPGVPGVGPKTAQKWIAKYGSLQGVIDNMDDIG 223 Query: 212 EKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 K L + + L RDI + DL + +L L Sbjct: 224 GKVGANLRENIDNVVLARDITEMVRDLKLVDDLDAL 259 >UniRef50_A5WH47 DNA polymerase I n=4 Tax=Bacteria RepID=A5WH47_PSYWF Length = 1022 Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/254 (28%), Positives = 127/254 (50%), Gaps = 11/254 (4%) Query: 5 LLIVDALNLIRRIHAV-------QG--SPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 +L+ + L R HA+ QG + + +AL +++ PTH FD +S Sbjct: 55 VLVDGSYYLFRTYHALPKTMMTTQGLTTNAIRGTLNALLKVMRRYHPTHMAVCFD--TKS 112 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +RH +YKA RP M EL +++P + G+P G EADD+ TL + Sbjct: 113 PTFRHTMSEEYKANRPKMDPELAEQIPYIHRLVRALGIPLLRIEGAEADDIIGTLTHRAI 172 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 + GH I + DK QL++ + + D F + +D P ++++FG++P Q+ D L G + Sbjct: 173 EEGHHVVISTGDKDMMQLVNDCVILEDSFAGKVVDVPAVEEKFGIKPNQIIDLLTLMGDA 232 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQ 235 S + G+ +G K+A + L ++Q+++ I N + K +KL + R +A + Sbjct: 233 SDGIKGIPSVGQKTAVKWLNQYQTVDNILANAHNIKGKVGEKLVEFVDNIPRDRQLATIV 292 Query: 236 TDLHIDGNLQQLRL 249 T+L I + + LR+ Sbjct: 293 TNLDIGQDWEDLRI 306 >UniRef50_A6CAX6 DNA polymerase I n=2 Tax=Planctomycetaceae RepID=A6CAX6_9PLAN Length = 900 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 135/259 (52%), Gaps = 12/259 (4%) Query: 1 MAVHLLIVDALNLIRRI-HAV------QGSPCVETCQHALDQLIMHSQPTHA--VAVFDD 51 M L I+D +L+ ++ HAV G P + + I++ TH+ +F Sbjct: 1 MKETLYIIDTFSLVFQVFHAVPAMTGPTGQPT--NAIFGITRDILNIIKTHSPDYLIFAM 58 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ G R+ +YKA R MPE+L ++P + + VP G EADD+ AT+A Sbjct: 59 DSSGPGTRNDLYSEYKANRSAMPEDLVPQIPHIMDVVKGFQVPVIECPGWEADDVFATIA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + G + TIV+ DK QL++ ++R+ + + +++DA + ++GV+P Q+ D+ L Sbjct: 119 RLANEKGIETTIVTNDKDARQLINDSIRLYNIRKNQFMDAEAVQADWGVRPDQVIDFQSL 178 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD-AVAEKWRKKLETHKEMAFLCRD 230 G S +PGV +GPK A L+ +F +LEG+ N D A K ++ L+ + A + R+ Sbjct: 179 VGDSVDNIPGVPLVGPKKAQTLIEQFGTLEGVLANADKAKGPKLQQNLKEFADQARMSRE 238 Query: 231 IARLQTDLHIDGNLQQLRL 249 + L L ++ N + RL Sbjct: 239 LVTLNQSLDLNINWEASRL 257 >UniRef50_Q73M72 DNA polymerase I n=1 Tax=Treponema denticola RepID=Q73M72_TREDE Length = 936 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 108/190 (56%), Gaps = 3/190 (1%) Query: 58 WRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQA 117 +RH+ +YKA R P++LH ++ + + +P +G EADD+ A++A + Sbjct: 67 FRHEMYKEYKATRDKTPDDLHAQIDKIEEILKTFKLPTVRCNGFEADDVIASIAALAEKE 126 Query: 118 GHQATIVSTDKGYCQLLSPTLRIRDYFQ-KRW--LDAPFIDKEFGVQPQQLPDYWGLAGI 174 G + ++S DK QL+S T + + K W DA + +E+GV P + D L G Sbjct: 127 GRECVVISGDKDLMQLVSKTTTMLKPGKIKAWEGFDAENVKEEWGVYPDGMLDLLSLIGD 186 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARL 234 S+ VPG+ G+GPK+A +LL E++SL+GIY N + + K+E KE A+ +++ RL Sbjct: 187 SADNVPGIKGVGPKTAVKLLEEYKSLDGIYANTGNLKGALKTKIEEGKESAYFSKELIRL 246 Query: 235 QTDLHIDGNL 244 + D+ ++ +L Sbjct: 247 RFDVPVEKDL 256 >UniRef50_B0TER6 DNA polymerase i n=2 Tax=Heliobacteriaceae RepID=B0TER6_HELMI Length = 939 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/261 (31%), Positives = 132/261 (50%), Gaps = 23/261 (8%) Query: 5 LLIVDALNLIRRIHAVQGSPCVETCQHA-----------LDQLIMHSQPTHAVAVFDDEN 53 +++D +L+ R A P + T Q L++L QP +AV D++ Sbjct: 6 FMVIDGSSLLHR--AFYALPLMSTSQGVHTNAVYGFLTMLERLRREYQPDF-LAVCLDKS 62 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 R + R QR YKA R PEEL + L+ +P + G EADDL L Sbjct: 63 RIT-HRTQRYEAYKAQRGATPEELRPQFGLLKEVLAAWRIPLFEEEGYEADDLIGALVCL 121 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL------DAPFIDKEFGVQPQQLPD 167 + G + IV+ D+ QL+SP + + F ++ + D + + G+ P+Q+ D Sbjct: 122 AKKQGIDSLIVTGDRDAWQLISPGVEV--LFTRKGISELERYDEEALKAKIGLTPRQVVD 179 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 + GL G S +PGV G+G K A +LL +F ++ +YE LD V K ++KL TH+E AFL Sbjct: 180 WKGLMGDPSDNIPGVPGVGEKRAFKLLEQFGDMDSLYERLDEVKGKLKEKLATHREQAFL 239 Query: 228 CRDIARLQTDLHIDGNLQQLR 248 R++A +Q ++ ++ + + R Sbjct: 240 SRELATIQCNIPLEPDWEACR 260 >UniRef50_Q7WZP8 DNA polymerase type I n=2 Tax=unclassified Bacteroidetes RepID=Q7WZP8_9BACT Length = 939 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 24/261 (9%) Query: 5 LLIVDALNLIRRIHAVQGSPCVETCQ-----------HALDQLIMHSQPTHAVAVFDDEN 53 L ++D ++LI R H G T Q + L L+ +PTH + FD + Sbjct: 8 LFLLDGMSLIYRAHFALGKAATTTAQGLKTGAILGFVNTLVALLEKEKPTHLIVAFDGKE 67 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +RH P YK+ RP PEE+ +P +++ E G+ + SG EADDL TLA K Sbjct: 68 KT--FRHALFPAYKSHRPVQPEEISIAIPYIKSILEGFGILAITYSGYEADDLLGTLAKK 125 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRI---RDYFQKRWLDAPFIDKEFGVQ-----PQQL 165 G + I+STDK Q++ + + Y +K + +KE Q P+Q+ Sbjct: 126 AAVMGCRTYIMSTDKDLAQIVGDNIYLYKPSSYGEKSTILG---EKEILAQWEIARPEQV 182 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 D L G S +PG+ IG K+A +L+ EF +LE I + + K + L + + Sbjct: 183 RDILALEGDPSDFIPGIPSIGKKTARKLIKEFDNLENILAHSHMLTGKLKANLIQYADQG 242 Query: 226 FLCRDIARLQTDLHIDGNLQQ 246 L +++A ++T++ I +L++ Sbjct: 243 ILSKELATIRTNVPITLDLEK 263 >UniRef50_C3J9S9 DNA polymerase type I n=2 Tax=Bacteria RepID=C3J9S9_9PORP Length = 937 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/231 (31%), Positives = 119/231 (51%), Gaps = 15/231 (6%) Query: 31 HALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQ 90 ++L ++I +P + +FD E S +RH+ YKA R PE + P ++ E Sbjct: 47 NSLIEIIKKEKPDYLAVIFDPEGGS--FRHREYTAYKAQRDATPEGILWAFPQVKRLLEA 104 Query: 91 RGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSP---TLRIRDYFQKR 147 +P EADD+ TL+ + + G + +V+ DK Y QL++ R + Sbjct: 105 LRIPAIEVPDYEADDVVGTLSQRAEKEGFEVYMVTADKDYGQLVTEHALMYRPGTKGAEV 164 Query: 148 WLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENL 207 W +A +K V Q+ DY L G +S +PG GIGPK A++LL +F S++ IYE+L Sbjct: 165 WGEAEVCEKFGLVHCSQMVDYLALVGDASDNIPGCKGIGPKKASELLTQFGSIDAIYEHL 224 Query: 208 DAVAEKWRKKLETHKEMAFLCRDIARLQTDL----------HIDGNLQQLR 248 D ++ +KKLE +E L R +A++ T++ H++ N+ QLR Sbjct: 225 DELSPSLKKKLEEGRENTLLSRYLAKICTEVPMEVEWETFRHLEPNVPQLR 275 >UniRef50_B9KYZ1 DNA polymerase I n=4 Tax=Thermomicrobia (class) RepID=B9KYZ1_THERP Length = 917 Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 111/215 (51%), Gaps = 9/215 (4%) Query: 41 QPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSG 100 +P + + FD +R Q +YKA RP P++L ++ +R + G+P + G Sbjct: 56 EPDYVIVCFDT---GRSFRQQLYEEYKAHRPETPDDLKHQLERIRQLLDALGIPIVTREG 112 Query: 101 NEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKE--- 157 EADDL TLA + T G + IV+ D QL+ +R+ ++R+ D D++ Sbjct: 113 YEADDLIGTLAARATANGLEVLIVTGDTDLLQLVDEDVRVILPGRQRFGDYRVYDRQAVI 172 Query: 158 --FGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKW 214 +G P++LP+Y L G S +PGV GIG K+AT+L+ F SLE + + +D V + Sbjct: 173 ERYGFPPERLPEYKALVGDPSDNIPGVPGIGEKTATRLIQRFSSLEEMLDRIDEVEPPRL 232 Query: 215 RKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 R+ L +E R +A + D I +L+Q R Sbjct: 233 REALRAARETVLASRRLATIVRDADITLDLEQARF 267 >UniRef50_D0KVP7 5'-3' exonuclease, N-terminal resolvase-like domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KVP7_HALNC Length = 324 Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 80/226 (35%), Positives = 114/226 (50%), Gaps = 16/226 (7%) Query: 30 QHALDQLIMHSQPTHA------VAVFDDE-NRSSGWRHQRLPDYKAGRPPMPEELHDEMP 82 + DQ I S HA V FD NRS +R P YKA RPP P EL ++P Sbjct: 57 ESVFDQNIQPSVTPHAEHGPVIVCTFDAPCNRS--FRQTIYPAYKAHRPPAPAELTAQLP 114 Query: 83 ALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRD 142 RA E G+ G EADD+ TL ++ + TI++ DK QLL P R + Sbjct: 115 RCRALAEAAGLCAIDHPGYEADDVIGTLVQRLRKRNRAVTIITGDKDLAQLLGPDDRWFN 174 Query: 143 YFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEG 202 +++ L +++ FGV+PQQ+ D+ L G S +PGV GIGP+ A LL + +++G Sbjct: 175 PMRQKVLAYGDVERHFGVKPQQIADWLALTGDVSDNIPGVPGIGPRIAGNLLKKHGTIDG 234 Query: 203 IYENLDAV-------AEKWRKKLETHKEMAFLCRDIARLQTDLHID 241 IY NL AV A + +K L H+ + L R + + L I+ Sbjct: 235 IYANLAAVYGMKFRGAPRVQKLLAEHESLVRLSRQLTGIVCTLPIE 280 >UniRef50_A4YLA1 DNA polymerase I (POL I) n=63 Tax=cellular organisms RepID=A4YLA1_BRASO Length = 1034 Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 3/208 (1%) Query: 41 QPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSG 100 +PTH VFD + +R+Q DYKA RPP P++L + +R A +PC SG Sbjct: 107 RPTHLAIVFDKSEVT--FRNQIYADYKAHRPPAPDDLIPQFALIREAVRAFDLPCLEQSG 164 Query: 101 NEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGV 160 EADDL AT A + G TIVS+DK QL++ + + D + R + + ++FGV Sbjct: 165 FEADDLIATYARLACERGATTTIVSSDKDLMQLVNDCVTMYDTMKDRRIGTAEVIEKFGV 224 Query: 161 QPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLE 219 P+++ + LAG S+ VPGV GIG K+A QL+ ++ LE + + + K R+ L Sbjct: 225 PPEKVVEVQALAGDSTDNVPGVPGIGIKTAAQLINDYGDLESLLTRAAEIKQPKRREALI 284 Query: 220 THKEMAFLCRDIARLQTDLHIDGNLQQL 247 + E A + R + L + ++ L L Sbjct: 285 ENAEKARISRQLVLLDDKVALEVPLDDL 312 >UniRef50_C4L1C4 5'-3' exonuclease n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L1C4_EXISA Length = 260 Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 80/249 (32%), Positives = 132/249 (53%), Gaps = 18/249 (7%) Query: 3 VHLLIVDALNLIRRIHAVQG-----SPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSG 57 + L++VD NL+ R + P V T + L ++ + +A F D R S Sbjct: 1 MKLILVDGFNLLSRYYFATERRRAQDPEV-TVKGLLRKVDSWTTDFSHIAFFWDGTREST 59 Query: 58 WRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQA 117 R+ P+YKA R +PE L ++ LR A ++RG+ +G EADDL +A T Sbjct: 60 HRYAMYPEYKATRNGLPEPLFEDYLKLRTALDERGILQSELTGYEADDLMGAVA---TAF 116 Query: 118 GHQATIVSTDKGYCQLLSPTLR--IRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 ++ + S+D+ QLLSP + + +++ ++ + +GV+P Q D L G S Sbjct: 117 PGESYLYSSDRDLLQLLSPNVFQIMPKKGEEQLVNEASFELMYGVKPYQFVDVKALQGDS 176 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIY-----ENLDAVAEKWRKKLETHKEMAFLCRD 230 S +PGV GIGPK+AT L+ + ++E +Y E L+A +K+ KKL+ H+E+A L + Sbjct: 177 SDNIPGVRGIGPKTATILIQHYDTIETLYMHVQNETLEAPHQKYAKKLDGHEEIALLSKR 236 Query: 231 IARLQTDLH 239 ++ Q D+H Sbjct: 237 LS--QIDIH 243 >UniRef50_C8W7U1 DNA polymerase I n=3 Tax=Coriobacteriaceae RepID=C8W7U1_ATOPD Length = 912 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 108/221 (48%), Gaps = 9/221 (4%) Query: 35 QLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVP 94 +L+ P + FD R LP YKA RPPM LH + P ++ + VP Sbjct: 70 KLVESFSPDGVICAFD--KGKPQIRIDMLPQYKAQRPPMDPALHAQFPVVKELLKTLDVP 127 Query: 95 CWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFI 154 G E DD+ TLA + G+Q + + D+ QL + ++I +K D + Sbjct: 128 VCQLEGWEGDDILGTLARRGEAEGYQMLLFTGDRDMYQLSTENVKIVST-RKGVSDVSIM 186 Query: 155 DKEF------GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD 208 E G+ P+ +PD++GL G SS +PGV GIGPK A L+VE+ SL+ + + D Sbjct: 187 TPETVADLYAGITPELVPDFYGLKGDSSDNIPGVPGIGPKKAAALIVEYGSLDEVIAHAD 246 Query: 209 AVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 V K + L H + A L R +A ++TD +D NL + Sbjct: 247 EVKGKVGENLRAHIDDALLSRKVATIRTDAPLDINLDDAKF 287 >UniRef50_Q1PUU8 Stongly similair to DNA polymerase I n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUU8_9BACT Length = 887 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 121/231 (52%), Gaps = 5/231 (2%) Query: 22 GSPC--VETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHD 79 G+P V L +L+ +P + VFD + ++ RHQ+ DYKA R PE+L Sbjct: 30 GTPANAVYGFTRMLLKLLREQRPDYLALVFDTKYTTN--RHQKYSDYKATRKETPEDLQV 87 Query: 80 EMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLR 139 ++P + G+P ++ G EADD+ +L + + + IV++DK QL+ P ++ Sbjct: 88 QIPLIYKVVRAFGIPVYAAKGYEADDVIGSLVTVLEKKEIEVVIVTSDKDLEQLIGPKVK 147 Query: 140 IRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQS 199 I + +D+ + + G+ P Q+ D LAG S +PGV GIG K+A L+ ++ S Sbjct: 148 ILHAKKGEIIDSDVLFTQKGIMPNQVVDVLALAGDVSDNIPGVPGIGNKTALDLIKKWGS 207 Query: 200 LEGIYENLDAVAEKWRKK-LETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 LE + N+ ++ K R++ L T + A R++ L D+ + +++ RL Sbjct: 208 LESVLANVGHISGKKRQENLRTFADQARFSRELLDLYNDIPLTVDMESCRL 258 >UniRef50_A5GAH5 Ribonuclease H n=6 Tax=Desulfuromonadales RepID=A5GAH5_GEOUR Length = 484 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 2/213 (0%) Query: 36 LIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPC 95 L+ ++P + +AV D R +R + P YKA R MP +L ++P +R + +P Sbjct: 47 LLQENRPDY-LAVVLDPPREETFRRELYPAYKAHRDAMPADLVPQLPYIRQILQALNIPA 105 Query: 96 WSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFID 155 G EADD+ ATLA + G + T+V+ DK Q++ + + D + + Sbjct: 106 LEAPGFEADDVIATLARRYAAEGIEVTVVTGDKDLLQIVGDGINLLDTMKDLRSGPQEVL 165 Query: 156 KEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR 215 FGV P+ +PD GLAG +S +PGV GIG K+A +L+ F SLEG+ + V K R Sbjct: 166 DRFGVPPELVPDVLGLAGDTSDNIPGVPGIGEKTAAELVRRFGSLEGVLQWKSLVNGKQR 225 Query: 216 KK-LETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 ++ L H + A L + +A ++ D+ +D +L +L Sbjct: 226 RENLHAHADQARLSKTLATVRYDVPLDLSLAEL 258 >UniRef50_B8I3Y7 DNA polymerase I n=6 Tax=Clostridium RepID=B8I3Y7_CLOCE Length = 896 Score = 117 bits (292), Expect = 5e-25, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 9/209 (4%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L + + P + FD ++ +RH+ YKA R MP EL ++P ++ + Sbjct: 47 LSKHLQDENPKYVCVAFD--LKAPTFRHKEYDQYKAQRKGMPNELAVQVPIIKQVLDAMN 104 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIR------DYFQK 146 + G EADD+ T++ + G + +++ D+ QL S RI+ + + Sbjct: 105 IARVEVEGFEADDILGTVSSYAEKQGMKTILLTGDRDSLQLASNYTRIKLPVTRANKTET 164 Query: 147 RWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYEN 206 D + +++GV P QL D GL G +S +PGV GIG K+A L+ +F SLE +YEN Sbjct: 165 DEYDYEKVIEKYGVTPGQLIDVKGLMGDTSDNIPGVPGIGEKTALALIKKFNSLEELYEN 224 Query: 207 LDAVAEKW-RKKLETHKEMAFLCRDIARL 234 +D V +K R+KLE +KE+AF+C+ +A + Sbjct: 225 IDKVDKKGVREKLENNKELAFMCKRLATI 253 >UniRef50_B1GZ14 DNA polymerase I n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZ14_UNCTG Length = 908 Score = 116 bits (291), Expect = 6e-25, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 3/208 (1%) Query: 41 QPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSG 100 +P + FD +++ +RH+ DYKA R P+ + L +MP R A + V G Sbjct: 49 KPDYMAVCFDYPSKN--FRHEIFKDYKANRKPLDKALISQMPIAREAVKALNVVGIEIKG 106 Query: 101 NEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLS-PTLRIRDYFQKRWLDAPFIDKEFG 159 EADDL AT+ +G Q IV+ DK QL T+ I +Y + D +++++G Sbjct: 107 YEADDLIATVTGNNKGSGVQTVIVTGDKDILQLAEDETVLIWNYSKDIMYDTKKVEEKYG 166 Query: 160 VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLE 219 V P+QL D + L G +S +PG+ GIG K+A +L+ +F +LE + +N D+V K L Sbjct: 167 VAPKQLSDIFALMGDASDNIPGIKGIGEKTAVKLIEKFGNLENVLQNADSVKGNMGKLLS 226 Query: 220 THKEMAFLCRDIARLQTDLHIDGNLQQL 247 KE A L R + L + +D L + Sbjct: 227 HGKEQALLSRKLIELNRRVPLDYKLGEF 254 >UniRef50_C1XI40 DNA polymerase I n=24 Tax=Bacteria RepID=C1XI40_MEIRU Length = 1273 Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 3/196 (1%) Query: 46 VAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADD 105 + VFD R+ +RH +YKAGR P++ H ++ ++ + G+ G EADD Sbjct: 71 IVVFDPPTRT--FRHDAFEEYKAGRAATPDDFHPQLEKIKELVDLMGLQRLEVPGYEADD 128 Query: 106 LAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQL 165 + TLA K Q G+ I++ D+ QLLS +++ R + + +++GV Q Sbjct: 129 VIGTLAKKAEQEGYPVRILTGDRDSFQLLSEAVQVM-LPDGRLMHPQAVQEKYGVSVAQW 187 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 DY L G SS +PG GIG K+A +LL E+ SLEG+Y NL+A++ K R LE ++ Sbjct: 188 VDYRSLVGDSSDNLPGAKGIGEKTAAKLLQEWGSLEGLYANLEALSPKIRASLEESRDNV 247 Query: 226 FLCRDIARLQTDLHID 241 L R ++ + TDL ++ Sbjct: 248 QLSRTLSLIHTDLPLE 263 >UniRef50_O34996 DNA polymerase I n=38 Tax=Bacteria RepID=DPO1_BACSU Length = 880 Score = 116 bits (291), Expect = 7e-25, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 119/221 (53%), Gaps = 9/221 (4%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L +++ +PTH + FD + +RH +YK GR P EL ++MP +R + Sbjct: 44 LMKMLEDEKPTHMLVAFDAGKTT--FRHGTFKEYKGGRQKTPPELSEQMPFIRELLDAYQ 101 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAP 152 + + EADD+ TLA + G + + S DK QL + + +K D Sbjct: 102 ISRYELEQYEADDIIGTLAKSAEKDGFEVKVFSGDKDLTQLATDKTTVA-ITRKGITDVE 160 Query: 153 F-----IDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENL 207 F + +++G+ P+Q+ D GL G SS +PGV G+G K+A +LL +F S+E + E++ Sbjct: 161 FYTPEHVKEKYGLTPEQIIDMKGLMGDSSDNIPGVPGVGEKTAIKLLKQFDSVEKLLESI 220 Query: 208 DAVA-EKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 D V+ +K ++KLE K+ A + +++A + TD I+ ++ L Sbjct: 221 DEVSGKKLKEKLEEFKDQALMSKELATIMTDAPIEVSVSGL 261 >UniRef50_B0S404 DNA polymerase I n=2 Tax=Finegoldia magna RepID=B0S404_FINM2 Length = 875 Score = 116 bits (290), Expect = 7e-25, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 7/205 (3%) Query: 42 PTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGN 101 P V FD + +RH++ +YK R PEEL + L+ + GV G Sbjct: 51 PDLVVVCFD--RKEPTFRHEKYSEYKGNRQETPEELIGQFDMLKELLKAMGVSYIDLKGY 108 Query: 102 EADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKE 157 EADD+A TLA + + + +++ DK Y QL+ ++ R + + D + +E Sbjct: 109 EADDIAGTLAKQASSKDYDVYLLTGDKDYLQLIDDNTKVVLTKRGITETKIYDVDVLKEE 168 Query: 158 FGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRK 216 +G+ P+Q+ D GL G S +PG+ G+G K+A + + ++ S+EG+YE++D ++ +K ++ Sbjct: 169 YGITPKQMIDLKGLMGDKSDNIPGIDGVGEKTALKYIQKYGSIEGLYEHVDEISGKKTKQ 228 Query: 217 KLETHKEMAFLCRDIARLQTDLHID 241 K+ +++A+L R++ + TD+ D Sbjct: 229 KVIDGEDIAYLSRELGTINTDVPED 253 >UniRef50_P59200 DNA polymerase I n=187 Tax=Firmicutes RepID=DPO1_STRR6 Length = 877 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 109/230 (47%), Gaps = 7/230 (3%) Query: 23 SPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMP 82 + + Q L L+ +P+H + FD + +R + DYK GR P+E ++ P Sbjct: 37 TNAIYGFQLMLSHLLERVEPSHILVAFD--AGKTTFRTEMYADYKGGRAKTPDEFREQFP 94 Query: 83 ALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSP----TL 138 +R + G+ + + EADD+ TL Q G TIVS DK QL + Sbjct: 95 FIRELLDHMGIRHYELAQYEADDIIGTLDKLAEQDGFDITIVSGDKDLIQLTDEHTVVEI 154 Query: 139 RIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQ 198 + + ++ +E G+ P Q D L G S +PGV +G K+ +LL+E Sbjct: 155 SKKGVAEFEAFTPDYLMEEMGLTPAQFIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEHG 214 Query: 199 SLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 SLEGIYEN+D + K ++ L KE AFL + +A + T I L+ L Sbjct: 215 SLEGIYENIDGMKTSKMKENLINDKEQAFLSKTLATIDTKAPIAIGLEDL 264 >UniRef50_Q4A5N5 Putative DNA polymerase I n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A5N5_MYCS5 Length = 294 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 118/232 (50%), Gaps = 8/232 (3%) Query: 11 LNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGR 70 +N+I R + + L + ++ +P + FD + R+ RH+ L YKA R Sbjct: 29 INVILRTSNGTPTNAITLFLKQLVKYLVFYKPDYLFIAFDAKERTK--RHELLDRYKANR 86 Query: 71 PPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGY 130 P+EL + ++ ++ V + ++G+EADDL AT + I S DK Sbjct: 87 IKAPQELFIQFDLIKEILKEMKVFYYESAGDEADDLIATFCKNF--ESLEKFIFSRDKDL 144 Query: 131 CQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSA 190 QL++ R+ +F+ + +++ + P Q+ D+ L G S +PG+ GIG K+A Sbjct: 145 LQLVNKNTRV--FFKDEEVTYLNFFEKYQINPDQIIDFKALKGDPSDNLPGIKGIGDKTA 202 Query: 191 TQLLVEFQSLEGIYENLDA--VAEKWRKKLETHKEMAFLCRDIARLQTDLHI 240 +LL EF++ E IY+NLD+ ++EK + L KE LC +A+L ++ + Sbjct: 203 IKLLNEFKTFENIYQNLDSKLISEKVKNNLLKGKENGMLCYQLAKLNYEVEV 254 >UniRef50_Q1V0V5 DNA polymerase I n=3 Tax=Candidatus Pelagibacter RepID=Q1V0V5_PELUB Length = 924 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 113/210 (53%), Gaps = 3/210 (1%) Query: 41 QPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSG 100 +PTH +FD ++ +R++ DYKA R P++L + +R + +P Sbjct: 63 KPTHFAVIFDAARKT--FRNEIYSDYKANRSEAPDDLAPQFEYIRKSVVAFNLPSVDLPN 120 Query: 101 NEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGV 160 EADDL AT ++ G + TIVS+DK QL +RI D + +++ I +FGV Sbjct: 121 YEADDLIATYVEQILAKGAKVTIVSSDKDLMQLYRKDVRIFDPMKNKFITPEDIVTKFGV 180 Query: 161 QPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLE 219 P+++ D LAG SS VPGV GIG K+A +L+ ++ +LE + +N + + K R+ L Sbjct: 181 GPEKVIDVQSLAGDSSDNVPGVPGIGVKTAAELINKYGTLEKLLDNAQEIKQNKRRETLI 240 Query: 220 THKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 +K+ A + + + L D ++ L++ L Sbjct: 241 ENKDKAIISKKLVTLMKDAPVERKLEEFHL 270 >UniRef50_B8GPC5 5'-3' exonuclease n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPC5_THISH Length = 332 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 10/215 (4%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L +L+ + P V FD E+ +RH+ P+YKA RPP PE L + RA G Sbjct: 48 LVRLLTRAAPAPVVFAFD-ESLGQSYRHEIYPEYKANRPPAPESLKRQFRQCRALVTALG 106 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAP 152 P +S+ EADD+ TL + AG +++ DK QL+ P ++ Q R LDA Sbjct: 107 FPAFSSPRYEADDIIGTLTARQQAAGGSVHLITADKDLTQLVGPGDLWWEFQQDRRLDAR 166 Query: 153 FIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE 212 ++K+ GV+P+Q+ D LAG +PGV GIG +A ++L F L+ ++ + D VA Sbjct: 167 GVEKKLGVRPEQVADQLALAGDKVDNIPGVPGIGMATAARILRRFGDLDTLFADTDEVA- 225 Query: 213 KWRKKLETHKEMAFLCRD------IARLQTDLHID 241 + + + +A L R+ ++R T +H D Sbjct: 226 --KLHIRGARRLADLVREHEHSVRLSRRLTGIHCD 258 >UniRef50_C6CWL9 5'-3' exonuclease n=3 Tax=Bacillales RepID=C6CWL9_PAESJ Length = 285 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/257 (28%), Positives = 131/257 (50%), Gaps = 18/257 (7%) Query: 5 LLIVDALNLIRRIHAVQ---------GSP--CVETCQHALDQLIMHSQPTHAVAVFDDEN 53 +LIVD + L+ R Q G+P + L + QPTH +D + Sbjct: 6 ILIVDGMALLFRAFFAQQYSARRMADGTPTNAIYGFMQYLFDAVNQFQPTHVACCWDMGS 65 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R + +YKA RP P++L + ++ G+P G EADD T++ + Sbjct: 66 KT--FRTEMYSNYKANRPEAPDDLIPQFSLVKDIVAALGIPNIGIEGYEADDCIGTVSKQ 123 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW----LDAPFIDKEFGVQPQQLPDYW 169 ++Q H I++ D+ QL+ + + + R D F+ ++ G+ P Q+ + Sbjct: 124 LSQMAH-VYILTGDQDMLQLVEERIHVVIMKKGRGNYAVYDLGFLKEDKGIHPFQVIEMK 182 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 GL G +S PGV GIG K+A +LL EF+S++GI NLD+V++ + K+E +M L R Sbjct: 183 GLTGDTSDNYPGVKGIGEKTALKLLQEFESIDGILSNLDSVSKSIKAKIEADLDMLHLSR 242 Query: 230 DIARLQTDLHIDGNLQQ 246 +AR+ ++ + +L++ Sbjct: 243 TLARINIEVPVACSLEE 259 >UniRef50_D1VS49 DNA polymerase I n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VS49_9FIRM Length = 885 Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 61/222 (27%), Positives = 120/222 (54%), Gaps = 7/222 (3%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L+ I +P+H V FD + ++ +R + DYK R P EL + P +R + Sbjct: 43 LENAIERVKPSHIVVCFDRKGKT--FRSELYKDYKGTRQKTPNELEQQFPLVRDILKYMN 100 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRW 148 + + EADD+A TL++ ++ G+++ +++ DK Y QL+ + + + Sbjct: 101 IVVLDSPVYEADDIAGTLSLIASKEGYKSYLLTGDKDYYQLVDDNTNVLMTRKGITELEV 160 Query: 149 LDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD 208 ++ I+ ++G+ PQ+ D GL G SS +PGV GIGPK+ +L+ E+ ++E +Y +L Sbjct: 161 VNLQSINDDYGISPQEFIDLKGLMGDSSDNIPGVPGIGPKTGLKLIKEYSTIENLYNHLS 220 Query: 209 AVA-EKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 ++ +K ++ LE +K AF+ + + + ++ + L L++ Sbjct: 221 EISGKKLKENLEENKVQAFMSKKLGTIVRNIDLPVGLSDLKI 262 >UniRef50_A7HP95 DNA polymerase I n=11 Tax=Alphaproteobacteria RepID=A7HP95_PARL1 Length = 979 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 83/259 (32%), Positives = 131/259 (50%), Gaps = 17/259 (6%) Query: 4 HLLIVDALNLI-RRIHAV-------QGSP--CVETCQHALDQLIMHS----QPTHAVAVF 49 HL +VD I R HA+ G P V + L +LI + +PTH +F Sbjct: 23 HLFLVDGSGYIFRAYHALPPLTRKSDGMPVGAVAGFCNMLYKLIEDTKDEFEPTHLAVIF 82 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D ++ +R+ P+YKA R E+L + +R A GVPC G EADD+ AT Sbjct: 83 DAAAKT--FRNDIYPEYKANRVEPSEDLRPQFALVRDATRAFGVPCIEKKGYEADDIIAT 140 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 A +AG + TIVS+DK QL++ + + D + + + + ++FGV P+++ D Sbjct: 141 YARLAHEAGARVTIVSSDKDLMQLVNDNVDMLDTMKLKTIAREQVIEKFGVPPEKVVDVQ 200 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLC 228 LAG S+ VPGV GIG K+A QL+ E+ LE + + +K R+ L E A + Sbjct: 201 ALAGDSTDNVPGVPGIGIKTAAQLIGEYGDLETLLARAGEIKQQKRRENLIEFAEQARIS 260 Query: 229 RDIARLQTDLHIDGNLQQL 247 R + L ++ ++ L+ + Sbjct: 261 RRLVELDNNVPLEEPLEGM 279 >UniRef50_Q2SRK9 DNA polymerase I n=4 Tax=Mollicutes RepID=Q2SRK9_MYCCT Length = 911 Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 133/263 (50%), Gaps = 24/263 (9%) Query: 1 MAVHLLIVDALNLI-RRIHAVQGSP--------------CVETCQHALDQLIMHSQP-TH 44 M +L+VD +LI R +A SP V + + L +I P H Sbjct: 1 MKTKILVVDGNSLIFRAFYATAYSPNTSLLKTKSGVLTNAVYSFINMLLSVIHQRGPYDH 60 Query: 45 AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEAD 104 + FD ++ +RH L DYKA R P EL ++ +R + + + EAD Sbjct: 61 ILIAFDKGKKT--FRHDLLSDYKANRIKTPNELVEQFSIVREFLTKANIQWFEQENIEAD 118 Query: 105 DLAATLAVKVTQA--GHQATIVSTDKGYCQLLSPTL----RIRDYFQKRWLDAPFIDKEF 158 D+A ++ + QA I+S+DK QL++ + ++ + +D + +++ Sbjct: 119 DIAGSICKYAEKQFDNLQAEILSSDKDMYQLITNKVICLNPVQGVNELEEVDTNKLFEKW 178 Query: 159 GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL 218 + P Q+PDY + G SS + GV GIG K A +L+ ++Q+LE IY NL+ + + KL Sbjct: 179 QILPNQVPDYKAIVGDSSDNLKGVNGIGQKGAIKLIQQYQNLENIYNNLEQIKGAIKTKL 238 Query: 219 ETHKEMAFLCRDIARLQTDLHID 241 E K+MAFLC+D+A ++TD+ ++ Sbjct: 239 EQDKKMAFLCKDLATIKTDVTLE 261 >UniRef50_A6NVK8 DNA polymerase I n=2 Tax=Bacteria RepID=A6NVK8_9BACE Length = 889 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 19/256 (7%) Query: 3 VHLLIVDALNLIRR----IHAV-----QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + L+++D +++ R +H + Q + V L +L+ +P FD Sbjct: 1 MKLMVIDGNSIVNRAFYGVHMLTTRDGQPTNAVYGFLTILQKLVDEEKPDALCCTFD--R 58 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +RH YKA R MP+EL +MP L+ + +P + G EADDL T++VK Sbjct: 59 KAPTFRHLAYEGYKAQRKGMPDELASQMPILKEVLDAMNIPRYEMDGWEADDLIGTISVK 118 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------RWLDAPFIDKEFGVQPQQLPD 167 AG +V+ DK QL++ R++ + + + + +G P + D Sbjct: 119 DAAAGWDTVVVTGDKDSLQLVTDRTRVKLVSTRMGQTTTKEMTPDTFRETYGFDPIHIID 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK--WRKKLETHKEMA 225 L G +S +PGV G+G K+A L+ +QS+E IY +LD V K KKL +E A Sbjct: 179 LKALMGDASDNIPGVKGVGEKTAMDLIQRYQSVEAIYADLDKVEAKPAVLKKLTEGREQA 238 Query: 226 FLCRDIARLQTDLHID 241 + D+A ++TD +D Sbjct: 239 MMSYDLATIRTDAPLD 254 >UniRef50_B7FRK5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FRK5_PHATR Length = 389 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 83/257 (32%), Positives = 131/257 (50%), Gaps = 23/257 (8%) Query: 5 LLIVDALNLIRR-------IHAVQGSP-------CVETCQHALDQLIMHSQPTHAVAVFD 50 L++VDA I R IH G P C + L++++ +P V VFD Sbjct: 61 LILVDASAYIFRAYYSMPPIHRSDGMPTGAVMGFCSMIMRLILNRIVEGERP-RLVLVFD 119 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + ++ +RH P+YK RP P +L + +R A + G+P + EADD+ ATL Sbjct: 120 AKGKT--FRHSLYPEYKGNRPDAPVDLVPQFALVREAAKAYGIPQIEAATFEADDVIATL 177 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLS-----PTLRIRDYFQKRWLDAPFIDKEFGVQPQQL 165 A + G I+S DK QL++ P++ + D + + +++G P+ L Sbjct: 178 ATMAIEEGIDTNILSGDKDLWQLITDREEIPSVHMIDPMTMGRITYDEVVEKWGCGPRLL 237 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRK-KLETHKEM 224 D LAG S+ VPGV GIGPK A L+ EF SLE + N+D V ++ R+ KL+ +++ Sbjct: 238 GDILALAGDSADNVPGVPGIGPKIAALLIEEFGSLEKLLANVDTVKQRARREKLKANEQQ 297 Query: 225 AFLCRDIARLQTDLHID 241 A L R + L+ D+ +D Sbjct: 298 ARLSRVLVDLRRDVPMD 314 >UniRef50_B2UNN5 DNA polymerase I n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNN5_AKKM8 Length = 945 Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 25/263 (9%) Query: 5 LLIVDALNLIRRIH------AVQGSPCVETCQ-----HALDQLIMHSQPTHAVAVFDDEN 53 L I+D + L R H ++ S V T + L ++ H +PTH A FD Sbjct: 9 LFILDGMALAYRAHFAFFSNPIRNSKGVNTSAVYGFANTLLGILEHERPTHIAACFDTSA 68 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA-V 112 ++ RH+ P YKA R MPEEL D+MP + E +P G EADD TLA + Sbjct: 69 PTA--RHKLYPAYKANRESMPEELSDQMPLIFRLLEAMNIPILRYEGYEADDTIGTLARI 126 Query: 113 KVTQAGHQATIVSTDKGYCQLLS-------PTLRIRDYFQKRWLDAPFIDKEFGVQ-PQQ 164 G Q +VS DK QL+S P R D+ +D + +++G++ Q Sbjct: 127 ADGTEGFQTYMVSQDKDLGQLISSTCFLWKPGKRGNDH---EVIDLAKLKEQWGIERADQ 183 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + D L G SS +PG+ G+G K+A L+ EF S+E + N D + K ++ +E + M Sbjct: 184 VVDILALMGDSSDNIPGLPGVGEKTAKLLIGEFGSVENLLSNTDKLKGKRKQIVEENGAM 243 Query: 225 AFLCRDIARLQTDLHIDGNLQQL 247 A L + +A + ++ + L +L Sbjct: 244 ATLSKQLATIDRNVPLTVTLPEL 266 >UniRef50_Q1JIU7 DNA polymerase I n=14 Tax=Streptococcus RepID=Q1JIU7_STRPD Length = 880 Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 9/211 (4%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 LD ++ QPTH + FD + +R + DYKAGR P+E ++ P +R G Sbjct: 48 LDHMMKRVQPTHVLVAFD--AGKTTFRTEMYADYKAGRAKTPDEFREQFPYIREMLTALG 105 Query: 93 VPCWSTSGNEADDLAATL--AVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQK 146 + + EADD+ TL + T+ TIVS DK QL + + + Sbjct: 106 IAYYELEHYEADDIIGTLDKMAERTEVPFDVTIVSGDKDLIQLTDENTVVEISKKGVAEF 165 Query: 147 RWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYEN 206 ++ ++ G+ P Q D L G S +PGV IG K+ +LL EF SLEGIYE+ Sbjct: 166 EEFTPAYLMEKMGLTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSLEGIYEH 225 Query: 207 LDAV-AEKWRKKLETHKEMAFLCRDIARLQT 236 +D A K ++ L ++ AFL + +A + T Sbjct: 226 IDGFKASKMKENLINDRDQAFLSKTLATINT 256 >UniRef50_C0QYF7 DNA polymerase I n=3 Tax=Brachyspira RepID=C0QYF7_BRAHW Length = 920 Score = 114 bits (285), Expect = 3e-24, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 131/251 (52%), Gaps = 14/251 (5%) Query: 1 MAVHLLIVDALNLIRRIHAV-QGSPCVETCQHALDQL---------IMHSQPTHAVAVFD 50 M LI+DA ++ R H + P + + + + ++++ P VA+ Sbjct: 1 MKKTFLIIDAFGILYRYHFIFLKRPLLNSKGQNVSSINGFMRTYFSLINTYPAEYVAIAL 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 D +R + +R++ +YK R MP++L ++P L + G+ EADD+ T+ Sbjct: 61 DSSRKT-FRNEIYKEYKENRESMPDDLRSQIPILYNLIDALGISRIVLDNYEADDIVGTI 119 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL---DAPFIDKEFGVQPQQLPD 167 A + + + I S DK QL+ +++ + L DA + ++ GV P Q+ D Sbjct: 120 AERNKKENIKTIIYSPDKDILQLVDDDVKVVASNKDNELMEYDAQAVKEKRGVYPNQIID 179 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 L G +S +PGV G+G K+A +LL E++SL+GIYEN+D++ K ++KL K+MA++ Sbjct: 180 LLSLMGDASDNIPGVKGVGEKTALKLLEEYKSLDGIYENIDSIKGKIQEKLLESKDMAYM 239 Query: 228 CRDIARLQTDL 238 +A ++ ++ Sbjct: 240 SYKLATIERNI 250 >UniRef50_C7RDU0 DNA polymerase I n=3 Tax=Anaerococcus RepID=C7RDU0_ANAPD Length = 879 Score = 114 bits (284), Expect = 4e-24, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 117/214 (54%), Gaps = 7/214 (3%) Query: 41 QPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSG 100 +P + + FD +++ +RH+ DYK R MP EL + L+ + V G Sbjct: 50 KPDYVLVAFDRASKT--FRHKEFEDYKGTRDKMPSELSYQFGILKDILDSLNVKYTDLDG 107 Query: 101 NEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDK 156 EADD+ T A +AG+++ +++ D+ Y QL+ + + + + + I + Sbjct: 108 FEADDIVGTYAKMAQEAGYESVLITGDRDYLQLVDEKIVVNLTKKGVSETKEYTVDTIKE 167 Query: 157 EFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWR 215 EFG+ P+QL + GL G S +PGV GIGPK A + ++ S+EG+Y+++D V+ +K + Sbjct: 168 EFGLSPKQLIEVKGLEGDKSDNIPGVDGIGPKKAIGFIQKYGSIEGLYDHIDEVSGKKTK 227 Query: 216 KKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 + L + +A++ + I + T ++ +L++L++ Sbjct: 228 QTLIDSEAIAYMSKKIGTIVTSAPVEFDLEELKV 261 >UniRef50_UPI0000DAED41 hypothetical protein Wendoof_01000149 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAED41 Length = 529 Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 101/182 (55%), Gaps = 6/182 (3%) Query: 57 GWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQ 116 +RH P+YKA R PE+L + LR A E + G EADD+ ATLA K Sbjct: 63 NFRHNLYPEYKANRVTPPEDLTPQFTILREAVEAFNLSYEEIEGYEADDIIATLAAKY-- 120 Query: 117 AGHQ---ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 A HQ +VS+DK QLL+ + I D + ++D + ++FGV +L D + L G Sbjct: 121 ANHQDFKVVVVSSDKDLFQLLNHNILIFDPIKNIYIDEKQVIEKFGVNSHKLLDLFSLTG 180 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIA 232 +S +PGV GIGPK+A +LL EF SL I EN+D + + + R L HKE A + R++ Sbjct: 181 DASDNIPGVPGIGPKTAAKLLDEFDSLNNIIENIDNIEQTRIRNILAEHKEKALISRELL 240 Query: 233 RL 234 L Sbjct: 241 SL 242 >UniRef50_Q6MEQ2 Probable DNA polymerase I n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEQ2_PARUW Length = 891 Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 108/204 (52%), Gaps = 3/204 (1%) Query: 35 QLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVP 94 +LI PTH VAVFD N S R + P YKA R MP++L ++ + + G+P Sbjct: 43 KLIKDFNPTHLVAVFDGPNNSQK-RTELYPAYKAHRKEMPKDLLYQILWSQRFCQLMGIP 101 Query: 95 CWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL-DAPF 153 G EADD ++A A I ++DK CQL+S + I + F+ + DA Sbjct: 102 ELMVPGVEADDTMGSIAKWAATLNTTAYICTSDKDMCQLVSNQILILNTFKDNLIIDANG 161 Query: 154 IDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYEN-LDAVAE 212 + ++FGV P Q+ DY + G +S +PG+ G GPK+A LL +F SL+ I E+ L+ + Sbjct: 162 VKEQFGVMPAQMIDYLAIIGDASDNIPGLTGFGPKTAADLLEKFGSLDYILEHPLEVSGK 221 Query: 213 KWRKKLETHKEMAFLCRDIARLQT 236 K + L + KE L + + + T Sbjct: 222 KKQDTLISEKEKVLLSKKLVIVDT 245 >UniRef50_D1Y4U0 DNA polymerase I n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4U0_9BACT Length = 866 Score = 113 bits (283), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 7/206 (3%) Query: 37 IMHSQ-PTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPC 95 + H Q P A FD + +RH+ P+YKA R P PEE ++P L GV Sbjct: 48 VRHDQRPDEIYAAFD--MKEPTFRHRLYPEYKATRRPTPEEFKIQVPLLHEMLPLLGVHI 105 Query: 96 WSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDA 151 EADDL + AV+ G + I+++DK Q+L P ++I + D Sbjct: 106 MERPSVEADDLIGSAAVQFASRGDEVLILTSDKDIMQVLRPGVKILRPGKGVSSFEEYDV 165 Query: 152 PFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA 211 P +++G P + DY L G S +PGV G+G K+A++LL + S+EGI E+ + Sbjct: 166 PHFTEKYGFPPDTMVDYLSLMGDSIDNIPGVPGVGEKTASKLLQSYGSIEGIMEHAGELK 225 Query: 212 EKWRKKLETHKEMAFLCRDIARLQTD 237 +KK+E H A R + RL+ D Sbjct: 226 PALQKKIEEHGAQAVANRKLTRLKCD 251 >UniRef50_Q89AD1 5'-3' exonuclease n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=EX53_BUCBP Length = 302 Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 137/264 (51%), Gaps = 18/264 (6%) Query: 3 VHLLIVDALNLIRRIHAVQ-------GSPC--VETCQHALDQLIMHSQPTHAVAVFDDEN 53 V+ L++D + + R + PC + + L +++ ++ V +FD Sbjct: 8 VNYLLIDGTSYLYRAYYAFLKFKNNFNKPCGAIYGMLNMLRSMLLKYPYSNIVVIFDSPQ 67 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R++ YK RP MP +L +++ + + G+P S EADD+ TLA K Sbjct: 68 KT--FRNELFIPYKKNRPKMPNDLKEQILPIHHIIKHIGIPIISIPHVEADDIIGTLATK 125 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 + + + I + DK QL++ + + LD + K++G+ P+ +PD GL G Sbjct: 126 LYKKKYFILISTNDKDLAQLVNIHIHVLIGTSNIVLDESKVKKKYGIIPKLIPDLLGLMG 185 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKK-------LETHKEMAF 226 +S +PGV +G K+A LL F SLE IY N++ + + KK L T+K++AF Sbjct: 186 DNSDNIPGVPTVGKKTALILLKTFGSLENIYNNIEKIPKCLIKKAKTIYNNLHTYKKLAF 245 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 L + +A ++TD++++ ++++++ Sbjct: 246 LSQKLATIKTDINVNITTKKIKML 269 >UniRef50_B1YKA1 DNA polymerase I n=3 Tax=Bacilli RepID=B1YKA1_EXIS2 Length = 865 Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 117/222 (52%), Gaps = 13/222 (5%) Query: 35 QLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVP 94 +L+ QPTH + FD S +RH +YK R P EL ++ P +R E G+ Sbjct: 45 KLLEEEQPTHMLVAFD--ASSETFRHDVYQEYKGSREKTPSELREQFPIVRDICEALGIQ 102 Query: 95 CWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL----- 149 EADDL TLA T + IV+ DK QL++ + + KR + Sbjct: 103 MMELHRYEADDLIGTLAQ--TMPADRIRIVTGDKDLLQLVTSQVEV--LITKRGITDVLC 158 Query: 150 --DAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENL 207 + F + G++P Q+ D GL G S +PGV GIG K+A +L+ + S+EG+YE++ Sbjct: 159 MTEELFAETYGGLKPIQMIDLKGLMGDKSDNIPGVPGIGEKTAIKLISAYGSVEGLYEHV 218 Query: 208 DAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 + + K ++K+ ++E+A L +++A ++ D+ +D L L++ Sbjct: 219 EDLKGKQKEKVVANEELARLSKELATIKLDVPLDVTLDDLQI 260 >UniRef50_A3EQ00 DNA polymerase I n=3 Tax=Leptospirillum RepID=A3EQ00_9BACT Length = 872 Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 9/232 (3%) Query: 25 CVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPAL 84 + + L ++ P+ VF E+R+ R + LP+ KA RP P + ++P + Sbjct: 55 AITVFGNMLLSVLKELSPSAMAVVF--ESRTGNVRSEILPEIKANRPEPPSDFLQQIPYI 112 Query: 85 RAAFEQRGVPCWSTSGNEADDLAATLAVK------VTQAGHQATIVSTDKGYCQLLSPTL 138 GVP ST G EADD A LA+K T ++S+DK L+S + Sbjct: 113 ERLIRGIGVPLLSTDGYEADDTIAALALKWLNHHDRTNVPCHVVVLSSDKDLLTLVSERV 172 Query: 139 RIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQ 198 + D K+ L + +++GV+P Q+PD L G ++ +PGV GIG K+A +LL Sbjct: 173 WVYDPMTKKVLGPSDVREKWGVEPWQIPDLLALTGDTADNIPGVPGIGQKTAAKLLGNQG 232 Query: 199 SLEGIYENLD-AVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 +++ +YE+LD V E+ R L H+E F + + L +DL + + L L Sbjct: 233 TIDTLYEDLDNVVPERIRALLREHRERVFRNKKVTVLHSDLALSLEPESLSL 284 >UniRef50_Q55971 DNA polymerase I n=13 Tax=Cyanobacteria RepID=DPO1_SYNY3 Length = 986 Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 11/224 (4%) Query: 37 IMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCW 96 +M SQ A+A+ D R +RH+ YK+ R PE+ +++ L+ E + Sbjct: 55 VMESQKPAAIAIAFDR-REPTFRHEADGAYKSNRQETPEDFAEDLSYLQQLLEALNLQTI 113 Query: 97 STSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR--------- 147 + +G EADD+ TLA + + AG+Q I+S D+ QL+SP I + R Sbjct: 114 TYAGYEADDILGTLACQGSDAGYQVKILSGDRDLFQLVSPEKNISVLYLTRNPFSSNTGY 173 Query: 148 -WLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYEN 206 LD + + GV P Q+ D+ L G S +PG+ GIG K+A +LL E+++LE +YEN Sbjct: 174 DELDWQGVVDKMGVTPAQIVDFKALCGDKSDCIPGINGIGEKTAIKLLAEYETLEKVYEN 233 Query: 207 LDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 L + + +L+ K+ A + +AR+ D+ + + L+L Sbjct: 234 LAQIKGALKTRLDNGKDDAMHSQMLARIVVDVPLPVTWEDLQLT 277 >UniRef50_Q8EWK4 DNA polymerase I: 5'-3' exonuclease n=1 Tax=Mycoplasma penetrans RepID=Q8EWK4_MYCPE Length = 292 Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 65/233 (27%), Positives = 119/233 (51%), Gaps = 12/233 (5%) Query: 23 SPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMP 82 + ++T + +L+ + +AV FD ++++ +R + L DYK R P+ L ++ Sbjct: 36 TNAIKTMMLIIFKLLTTNNYDYAVIAFDHKDKN--FRKEELEDYKGTRKKTPDHLISQIE 93 Query: 83 ALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRD 142 ++ G+ + SG EADD+ + + +T I S+D QL++ + Sbjct: 94 PIKEIMSYFGLNVYCVSGIEADDVVGSASKLLTDNDVYCEIYSSDNDLLQLVNEKANVIQ 153 Query: 143 YFQKRWLDAP-------FIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLV 195 K+ +D F + +G+QP Q+PDY G++G SS +PG+ G+G K+A LL Sbjct: 154 L--KKGIDETITYTQENFSNLFYGLQPAQIPDYKGISGDSSDNLPGIKGLGNKTAIDLLQ 211 Query: 196 EFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 +++SLE IYENLD + + + KL KE+ C+ +A + + D + + Sbjct: 212 KYKSLESIYENLDFITSNSVKTKLLAGKEIGLKCKKLATILVNYFDDKKIDEF 264 >UniRef50_B0SCM1 DNA-directed DNA polymerase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCM1_LEPBA Length = 942 Score = 113 bits (282), Expect = 7e-24, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 7/222 (3%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L +L+ TH FD R R+ +YKA R PMPE+L ++ + + Sbjct: 45 LFKLLQDEHVTHIAFTFDPGTRLE--RNDLYEEYKAHRKPMPEDLKPQIQKIYEMLQALE 102 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRW 148 P + +G EADD+ +L K + + I+S+DK Q+L + + R + Sbjct: 103 FPMYKINGIEADDIIGSLCKKFGKDFEEIVILSSDKDLYQVLDKNIHMLRGKRGVSEFEK 162 Query: 149 LDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD 208 +D ++ G+ +Q+ DY L G +S +PGV GIG K A +L+ EF LE IY+ +D Sbjct: 163 IDPKWVKTNIGITKEQVTDYMALLGDASDNIPGVKGIGEKGAAKLIQEFGDLETIYKKID 222 Query: 209 AVAEK-WRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 V K KL KE AFL R +A + T+L +D L+L Sbjct: 223 KVKNKSLIDKLIADKENAFLSRKLATIVTNLKLDIKKSDLKL 264 >UniRef50_B0KAJ0 DNA polymerase I n=12 Tax=Thermoanaerobacterales RepID=B0KAJ0_THEP3 Length = 872 Score = 112 bits (281), Expect = 8e-24, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 116/221 (52%), Gaps = 6/221 (2%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L +LI +P + FD ++ +RH+ DYKA R MPEEL +++ L+ E Sbjct: 41 LIKLIEEEKPDYIAIAFD--KKAPTFRHKEYQDYKATRQAMPEELAEQVDLLKEIIEGFN 98 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIR----DYFQKRW 148 + G EADD+ T++ + + +V+ D+ QL+S ++++ Q Sbjct: 99 IKILELEGYEADDIIGTISKLAEEKEMEVLVVTGDRDALQLVSDKVKVKISKKGITQMEE 158 Query: 149 LDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD 208 D + + + + P Q D GL G S +PG+ IG K+A +LL +F ++E + +NL Sbjct: 159 FDEKAVLERYEITPHQFIDLKGLMGDKSDNIPGIPNIGEKTAIKLLKDFGTIENLLQNLS 218 Query: 209 AVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 + K ++ +E +KE+A + + +A ++ D+ I+ + ++ R+ Sbjct: 219 QLKGKIKENIENNKELAIMSKKLATIKRDIPIEIDFEEYRV 259 >UniRef50_A9BEU8 DNA polymerase I n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEU8_PETMO Length = 896 Score = 112 bits (281), Expect = 8e-24, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 109/198 (55%), Gaps = 4/198 (2%) Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 +F + +++ +RH+ L YKA RP PE+ ++P + E+ G+ + EADD+ Sbjct: 58 IFVMDKKTTTYRHELLESYKAQRPETPEKYIQQIPYIYEMVEKLGIKLVAMDNYEADDVI 117 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQ 163 AT+ K + I+++DK QL+ + I + + DA ++K+ GV P+ Sbjct: 118 ATIVSKKKRNYDNVYIITSDKDMMQLVKDNVYILRPEQGITEMVKYDAQQVEKKMGVPPE 177 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 ++ D L G SS +PGV GIG K+A +LL ++ +++ +Y++LD + + KL+ KE Sbjct: 178 KIADLLALMGDSSDNIPGVKGIGIKTAQKLLQDYDNIDDLYQHLDEIKGSTKNKLKNEKE 237 Query: 224 MAFLCRDIARLQTDLHID 241 A+L + + +L D I+ Sbjct: 238 TAYLSKKLVQLMVDAPIE 255 >UniRef50_D1B5M0 DNA polymerase I n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5M0_THEAS Length = 836 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 79/244 (32%), Positives = 119/244 (48%), Gaps = 16/244 (6%) Query: 1 MAVHLLIVDALNLIRR-------IHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ L+VD L R + A G+P V + L +++ +PT FD Sbjct: 1 MSDRFLLVDGHGLAFRAFYALPALSAPDGTPVNAVLGFLNMLYKVLEDQRPTGWAIFFDP 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 R + L YKAGR P P+E ++P + E G P G EADD+ A A Sbjct: 61 PGPV--IRREVLESYKAGRRPTPQEFKVQLPIIIDLLEALGHPVHVREGQEADDVIAATA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPD 167 V ++ +G + I+S DK Q++SP++++ + + R D +E+ P + D Sbjct: 119 VNLSGSG-EVVILSADKDLLQVISPSVKVCRPVKGVSEFRVYDQEAFLEEYRFPPALMAD 177 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 Y L G S +PGV GIG K A +L+ LE IYE LD ++ RK+LE +E+AFL Sbjct: 178 YLALTGDSVDNIPGVPGIGDKGARELVSSLGPLESIYEALDRLSPAKRKRLEEGRELAFL 237 Query: 228 CRDI 231 R + Sbjct: 238 SRQL 241 >UniRef50_D2RIE4 DNA polymerase I n=5 Tax=Clostridiales RepID=D2RIE4_ACIFE Length = 872 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/259 (28%), Positives = 130/259 (50%), Gaps = 24/259 (9%) Query: 1 MAVHLLIVDALNLIRRI----------HAVQGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 M L++D +LI R + V C L +L+ QP++ + FD Sbjct: 1 MDEKFLLIDGSSLIHRAFFALPPLTNKNGVNTGAVYGLCNMIL-KLLQEIQPSYMLVAFD 59 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 ++ +R ++ P+YK R P EL ++ P + G+P EADD+ TL Sbjct: 60 KSRKT--FRTEKFPEYKGQRKATPPELKEQFPLSIQLLQSMGIPTLEVDNYEADDIIGTL 117 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLD--APFIDKEFG-----VQPQ 163 + + Q IV+ D+ QL+ +++ F K+ + A + +K FG +QP+ Sbjct: 118 SSGAPE-NVQVRIVTGDRDEFQLIKGNVQV--LFTKKGISNIAVYDEKAFGEEYQGLQPR 174 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHK 222 Q+ D GL G +S +PGV G+GPK+A +L+ E++++E + ++ + V K ++KL ++ Sbjct: 175 QIIDLKGLMGDTSDNIPGVPGVGPKTALKLITEYRTVENVLDHAEEVKGKALKEKLRNNR 234 Query: 223 EMAFLCRDIARLQTDLHID 241 E A L +D+A + + ID Sbjct: 235 EQALLSKDLATICLQVPID 253 >UniRef50_Q2GI23 DNA polymerase I n=6 Tax=Rickettsiales RepID=Q2GI23_EHRCR Length = 944 Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 111/205 (54%), Gaps = 4/205 (1%) Query: 44 HAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEA 103 + V VFD S +RH P+YK RP +P++L + LR A + G EA Sbjct: 52 YLVVVFD--TGSKNFRHNIYPEYKGNRPKLPDDLIPQFSLLREAVNAFNIASEEVVGYEA 109 Query: 104 DDLAATLAVKVTQ-AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQP 162 DD+ ATL+ K + G + T+V++DK QLL + I D + ++++ + +FG+ Sbjct: 110 DDVIATLSKKYCKLQGVKVTVVTSDKDLLQLLKYNICIFDPIKNKYIEEEDVQSKFGISS 169 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETH 221 QL D+ L G +S VPG+ GIG K+A +LL +F SL+ + ++ V K R+ + + Sbjct: 170 NQLLDFLSLTGDASDNVPGIPGIGVKTAAKLLNDFGSLDNLLLHVHEVKTNKCRESITQY 229 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQ 246 + A L R + L ++ I G++++ Sbjct: 230 SDQAILSRQLVTLCDEVDICGDIEK 254 >UniRef50_Q21YU4 DNA polymerase I n=39 Tax=Betaproteobacteria RepID=Q21YU4_RHOFD Length = 957 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 15/251 (5%) Query: 5 LLIVDALNLIRR-------IHAVQGSP------CVETCQHALDQLIMHSQPTHAVAVFDD 51 LL+VD + + R + AV G P + + L L +A +FDD Sbjct: 15 LLLVDGSSYLYRAFHAMPDLRAVPGDPSSAPTGAIRGMINMLQSLRKEVPADYAACIFDD 74 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + + +R P+YKA R PMP++L ++ + G + G EADD+ TLA Sbjct: 75 KGPT--FRDALYPEYKAHRSPMPDDLRSQIEPIHEVVRLMGWKVLAVPGVEADDVIGTLA 132 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 V + G + + S DK QL++ + I D R D ++ EFGV PQ + D+ L Sbjct: 133 VTAARQGIEVIVSSGDKDLAQLVNSHITIIDTMNGRRRDVAGVEAEFGVPPQLMVDFQTL 192 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G VPGV +GPK+A + L E+ SL+ + N D + + L+ + L R + Sbjct: 193 VGDVIDNVPGVPKVGPKTAAKWLQEYGSLDAVVANADQIKGVVGENLKKSLDWLPLGRQL 252 Query: 232 ARLQTDLHIDG 242 ++TD +DG Sbjct: 253 LTIKTDCDLDG 263 >UniRef50_A9ITV6 DNA polymerase I n=89 Tax=Proteobacteria RepID=A9ITV6_BORPD Length = 948 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/253 (29%), Positives = 120/253 (47%), Gaps = 11/253 (4%) Query: 1 MAVHLLIVDALN-LIRRIHAV------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDD 51 M LL+VD + L R HA+ QG P + + L +L+ + +A +FD Sbjct: 44 MNKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVSDHKADYAACIFD- 102 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 R +R PDYK+ RPPMPE+L ++ + A G + G EADD+ TLA Sbjct: 103 -ARGKTFRDDLYPDYKSHRPPMPEDLAAQIEPIHQAVRALGWQVLAIEGVEADDIIGTLA 161 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + + G + + + DK QL+ + + + LD + +FGV P ++ DY L Sbjct: 162 CQASGMGIRTIVSTGDKDLAQLVDANVTLVNTMSGEVLDETGVRNKFGVPPDRIVDYLML 221 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G + VPGVA +GPK+A + L EF S++ + E D + L L R + Sbjct: 222 VGDAIDNVPGVAKVGPKTAAKWLAEFGSIDSLVEQADGIKGVAGNNLREAIGQFPLTRQL 281 Query: 232 ARLQTDLHIDGNL 244 ++ D + G++ Sbjct: 282 LTVKCDCDLAGHI 294 >UniRef50_B6G9J6 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6G9J6_9ACTN Length = 932 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/261 (29%), Positives = 125/261 (47%), Gaps = 19/261 (7%) Query: 5 LLIVDALNLIRR-IHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENR 54 + ++D +L+ R HAV GSP V + +++ P V FD + Sbjct: 14 IAVIDGNSLMHRAFHAVPPTMNAPDGSPTNAVFGFLNMFLKMVDEFSPDGVVCAFDKGHP 73 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 R + LP YKA RPPM L + P ++ VP G E DD+ TLA + Sbjct: 74 K--VRMEMLPQYKAQRPPMDPNLRAQFPMIKELLASLSVPVVELEGWEGDDILGTLARRG 131 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKE------FGVQPQQLPDY 168 AG +V+ D+ QL++ + + +K D + E G+ P+ +PD+ Sbjct: 132 EAAGCDMYLVTGDRDMYQLVTDHVHVVST-RKGLSDIAIMTPESVDDLYHGITPELVPDF 190 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 +GL G SS +PGV GIGPK A+ L+V++ SL+ + + D V K + L H + A + Sbjct: 191 YGLKGDSSDNIPGVPGIGPKKASALIVQYGSLDEVIAHADEVKGKMGESLRAHIDDALVS 250 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 R IA + TD ++ +L ++ Sbjct: 251 RKIATIMTDAPVECDLDEVSF 271 >UniRef50_C5RBK8 DNA polymerase I n=9 Tax=Lactobacillales RepID=C5RBK8_WEIPA Length = 931 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 119/224 (53%), Gaps = 12/224 (5%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 LD +I P A+ +D + +R + +YK R P+EL ++ LR E G Sbjct: 79 LDGIIDPFNPDLALVAWD--AGKTTFRTGKFDNYKGNRDNTPQELVEQFEPLRKMVELHG 136 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLD-- 150 + + G EADD+ T+A + G+ TIV+ D+ QL+S + + + K+ + Sbjct: 137 IKSYELPGFEADDIIGTMARLGEENGYSVTIVTGDRDMTQLVSDDITV--WVTKKGISEI 194 Query: 151 ---APFIDKEF--GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYE 205 P + E G++P+Q+ D GL G +S PGVAGIGPK+A +L+ ++ S+ +YE Sbjct: 195 DHYTPAMIAELYDGLEPKQIVDIKGLQGDTSDNYPGVAGIGPKTALKLIKQYHSIPEMYE 254 Query: 206 NLDAV-AEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 +D + A K ++KL K+ A L RD+A++ TD + +L L Sbjct: 255 QIDEMKASKQKEKLVNGKQDAMLSRDLAKILTDAPVTISLSDLN 298 >UniRef50_D1AV04 DNA polymerase I n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AV04_STRM9 Length = 861 Score = 111 bits (277), Expect = 2e-23, Method: Composition-based stats. Identities = 65/225 (28%), Positives = 122/225 (54%), Gaps = 11/225 (4%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L+ + + P + +A D R+ R + +YK R MP+EL ++ A+ E G Sbjct: 41 LELALSYFSPEYVIAA-KDVKRAELKRREIYKEYKENRSGMPDELVMQLDAIDGILEGYG 99 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAP 152 +P EADD+ A+++ K ++ ++ I++ DK QL++P I K+ + P Sbjct: 100 IPIIKIPSYEADDVIASISKKYSK-DYEIIILTGDKDLAQLINPNTSIA-LLGKKDENEP 157 Query: 153 F--------IDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIY 204 + + + GV+ Q+ D +GL G SS +PGV GIGPK+ +L+ E+ +++ IY Sbjct: 158 YKIIENDEDVIEYLGVKSYQIKDLFGLIGDSSDGIPGVLGIGPKTGAKLIAEYDNIDNIY 217 Query: 205 ENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 N+D + +KK+ K++A++ R++A + +L ID N++ ++ Sbjct: 218 ANIDNIKGALQKKIIASKDLAYISRELATVFDELDIDLNIEDAKI 262 >UniRef50_P52028 DNA polymerase I, thermostable n=18 Tax=Bacteria RepID=DPO1T_THET8 Length = 834 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/202 (33%), Positives = 117/202 (57%), Gaps = 4/202 (1%) Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 VFD ++ +RH+ YKAGR P PE+ ++ ++ + G G EADD+ Sbjct: 66 VFD--AKAPSFRHEAYEAYKAGRAPTPEDFPRQLALIKELVDLLGFTRLEVPGYEADDVL 123 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPD 167 ATLA K + G++ I++ D+ QL+S + + + + + ++ +++G++P+Q D Sbjct: 124 ATLAKKAEKEGYEVRILTADRDLYQLVSDRVAVL-HPEGHLITPEWLWEKYGLRPEQWVD 182 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAF 226 + L G S +PGV GIG K+A +LL E+ SLE + +NLD V E R+K++ H E Sbjct: 183 FRALVGDPSDNLPGVKGIGEKTALKLLKEWGSLENLLKNLDRVKPENVREKIKAHLEDLR 242 Query: 227 LCRDIARLQTDLHIDGNLQQLR 248 L +++R++TDL ++ +L Q R Sbjct: 243 LSLELSRVRTDLPLEVDLAQGR 264 >UniRef50_P46835 DNA polymerase I n=51 Tax=Actinobacteridae RepID=DPO1_MYCLE Length = 911 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 17/217 (7%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L L+ PTH A FD ++ +R + YKA R +P E H ++ + G Sbjct: 57 LINLLREEAPTHIAAAFDVSRKT--FRSECYAGYKANRSSIPAEFHGQIDITKEVLGALG 114 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------ 146 + ++ +G EADDL ATLA + G++ +V+ D+ QL+S + + Y +K Sbjct: 115 ITVFAEAGFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSNDVTVL-YPRKGVSELT 173 Query: 147 RWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYEN 206 R+ I+K +GV P Q PD L G S +PG+ G+G K+A + +V++ SL+G+ +N Sbjct: 174 RFTPEAVIEK-YGVTPAQYPDLAALRGDPSDNLPGIPGVGEKTAAKWIVDYGSLQGLVDN 232 Query: 207 LDAVAEKWRKKLETH-------KEMAFLCRDIARLQT 236 +++V K + L TH +E+ L +D+ +QT Sbjct: 233 VESVRGKVGEALRTHLASVVRNRELTELVKDVPLVQT 269 >UniRef50_Q14QK7 DNA polymerase I n=1 Tax=Spiroplasma citri RepID=Q14QK7_SPICI Length = 869 Score = 110 bits (276), Expect = 3e-23, Method: Composition-based stats. Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 7/230 (3%) Query: 17 IHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMP 74 + ++ G+P V + L++++ + V FD ++ +RH L DYK GR P Sbjct: 27 LKSLDGTPTNAVYAFTNMLNKILKANNYYSVVVAFDKGKKN--FRHDLLVDYKDGRSKTP 84 Query: 75 EELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLL 134 EL + P ++ + +P G EADDL LA+ + I S+DK QL+ Sbjct: 85 NELIVQFPIVKEFLDSYQIPYLEQEGYEADDLLGCLAMLAEKEDFYVDIFSSDKDLYQLI 144 Query: 135 SPTLRI---RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSAT 191 + I R +D + ++G++P Q+PD GL G S + GV +G K+A Sbjct: 145 TNKTNILVPRQGDSADVIDEAALIAKWGIKPLQVPDLKGLMGDPSDNLKGVPKVGEKTAI 204 Query: 192 QLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHID 241 +L+ E+ S+E +Y+N++ + ++ L HKE A LC+ IA + D++++ Sbjct: 205 KLIKEYHSIENLYDNIEHIKGALQQNLLNHKESALLCKKIATIFCDINLE 254 >UniRef50_B2GGW1 DNA polymerase I n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GGW1_KOCRD Length = 960 Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 6/214 (2%) Query: 35 QLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVP 94 +L+ +PTH V FD E + R Q +YK GR PEE H ++P ++ E GVP Sbjct: 91 KLVREEKPTHLVVSFDLEGPT--LRSQEYGEYKGGRDETPEEFHGQVPNIQRVLEALGVP 148 Query: 95 CWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLD 150 + G+EADD+ ATLA + + + S D+ Q+++ + + R R +D Sbjct: 149 IVTMEGHEADDVLATLASRAAAEDFEVLVFSGDRDAFQMITDHVTVVYPGRTPSDLRRMD 208 Query: 151 APFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV 210 A + +++ V PQ PD L G ++ +PGV G+GP A + + + ++ + E+ + Sbjct: 209 AAAVYEKYKVAPQNYPDLAALTGETADNLPGVPGVGPGFAAKWITAYGPVDSLLEHAGQI 268 Query: 211 AEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNL 244 K + L ++E+ R + RL TDL ++ +L Sbjct: 269 TGKKGEALRENEELVRRNRKLNRLVTDLPLEIDL 302 >UniRef50_D2QFD0 DNA polymerase I n=3 Tax=Bacteria RepID=D2QFD0_9SPHI Length = 1024 Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 28/265 (10%) Query: 5 LLIVDALNLIRRIH-AVQGSPCVET----------CQHALDQLIMHSQPTHAVAVFDDEN 53 L ++DAL LI R H A SP + + +A+ +++ +PTH FD Sbjct: 8 LFLLDALALIYRAHFAFSKSPRISSRGINTSAVFGFMNAMIEVLTKEKPTHIGVAFDSAK 67 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +RH+ P YKA R PE++ MP ++ E +P G EADD+ T+A K Sbjct: 68 KT--FRHESFPMYKANRQSQPEDISVAMPYIKQIVEAMHIPMLILDGYEADDIIGTIAKK 125 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGV----------QPQ 163 A + +++ DK Y QL+ + I ++ ++ P ++ GV + + Sbjct: 126 AALADFEVYMMTPDKDYGQLVEEHIHI---YKPAFMGKP--AEKLGVTEVLERWQIERIE 180 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 Q+ D GL G S +PG+ GIG K+A +L+ +F S+E + D + K ++ + + Sbjct: 181 QVTDMLGLMGDSVDNIPGIPGIGEKTAQKLIADFGSVENLIARADELKGKLKENVVNFAQ 240 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLR 248 + +++A + D+ + + + LR Sbjct: 241 QGLMSKELATIHLDVPVPFDEEHLR 265 >UniRef50_B9M4P2 DNA polymerase I n=3 Tax=Deltaproteobacteria RepID=B9M4P2_GEOSF Length = 891 Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 120/236 (50%), Gaps = 4/236 (1%) Query: 7 IVDALNLIRRIHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLP 64 I A IR + + +G P + L +++ +P H VFD + +R++ P Sbjct: 16 IYRAYYAIRHLSSPKGFPTNALYGFIQMLLKVVKDRKPDHLAVVFDAGKLT--FRNEIYP 73 Query: 65 DYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIV 124 YKA R MP++L ++ ++ A +P G EADD+ T+A + G A IV Sbjct: 74 AYKANRSAMPDDLRLQIEPIKEAVRAFRIPVLELPGFEADDIIGTIACDCEKKGMAAVIV 133 Query: 125 STDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAG 184 + DK Q+++ ++ + D + + + + FGV P+++ D LAG SS +PG+ G Sbjct: 134 TGDKDLMQIVTDSVTLLDTMKDKASGPAEVVERFGVPPERVVDILALAGDSSDNIPGIPG 193 Query: 185 IGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHI 240 IG K+A +L+ E SL+ + EN V K ++L + A L R +A ++ ++ + Sbjct: 194 IGEKTAIKLIQEHHSLDQLLENASVVKGKVGERLREFADQARLSRRLATIECNVPV 249 >UniRef50_A9SI76 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SI76_PHYPA Length = 310 Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 10/221 (4%) Query: 26 VETCQHALDQLI--MHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPA 83 V T AL +I + ++PTH A FD + + +RH+ P YK+GR P P+ + + Sbjct: 36 VLTVFTALSTMIRLLDTKPTHVAAAFDYKGLT--FRHELYPAYKSGRAPTPDTVCQALSC 93 Query: 84 LRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDY 143 L+ A G+ +G EADD A AV+ AG +I S DK + Q++SP LR+ + Sbjct: 94 LKPALLSLGISVVEVAGVEADDAIAAFAVRAVDAGMHVSIASPDKDFFQIISPRLRLLRF 153 Query: 144 FQKRWLDAPFIDKEF-----GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQ 198 + PF KEF +QP Q + L G +PG+ G+G +A +L+ E+ Sbjct: 154 VPRGSGIVPFGVKEFQKRFGDIQPWQYLEVLALMGDKVDNIPGLPGVGEVTALKLVKEYG 213 Query: 199 SLEGIYENLDAVAEKW-RKKLETHKEMAFLCRDIARLQTDL 238 ++E + EN D V K R+ L + + + L+ DL Sbjct: 214 TVENLLENRDKVKLKRPRESLMADDGGILMSKKLLSLRLDL 254 >UniRef50_B4U0B7 DNA polymerase I n=5 Tax=Streptococcus RepID=B4U0B7_STREM Length = 899 Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 109/223 (48%), Gaps = 11/223 (4%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 LD ++ QPTH + FD + +R + DYKAGR P+E ++ P +R G Sbjct: 67 LDHMMKRVQPTHVLVAFD--AGKTTFRTELFADYKAGRAKTPDEFREQFPYIRDMLGALG 124 Query: 93 VPCWSTSGNEADDLAATL--AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQ----- 145 + + EADD+ TL + T+ TIVS DK QL + + Sbjct: 125 IAFYELEHYEADDIIGTLDKMAERTELPFDVTIVSGDKDLIQLTDANTVVEISKKGVAEF 184 Query: 146 KRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYE 205 + + A +DK G+ P+Q D L G S +PGV IG K+ +LL E+ SLEGIY+ Sbjct: 185 EEFTPAYLMDK-MGLTPEQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEYGSLEGIYQ 243 Query: 206 NLDAVA-EKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 ++D+ K ++ L KE AFL + +A + T I L+ + Sbjct: 244 HVDSFKPSKMKENLLHDKEQAFLSKTLATINTSAPITIGLEDI 286 >UniRef50_Q1LTX9 DNA polymerase I n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=Q1LTX9_BAUCH Length = 306 Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 122/259 (47%), Gaps = 18/259 (6%) Query: 5 LLIVD-ALNLIRRIHAV------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 LL+VD + L R HA G P + + L+ L + +FD ++ Sbjct: 2 LLLVDGSFYLYRAYHAFPLLTNNLGEPTGAIYGVINMLNSLFKQYSTSSIAIIFDAYGQN 61 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +RH+ DYK R M ++L ++ L + G+P G E+DD+ TLA + Sbjct: 62 --FRHKIFHDYKLNRTRMSKDLSCQIDPLYKIIQSMGLPLLVVKGVESDDVIGTLAHQAM 119 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 I + DK QL+SP + + + L + K+FGV P+ + DY L G Sbjct: 120 CNNINVLISTGDKDMAQLVSPKIHLFNSTMNMRLGPKEVQKKFGVLPELIIDYIALVGDK 179 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEMAFLC 228 S +PGV GIG K+A LL +F L+ +Y+NL + + KL+ ++E AFL Sbjct: 180 SDNIPGVPGIGKKTAKILLQQFGGLKFLYQNLHKLNHFNLCRNKNLATKLDNYREKAFLS 239 Query: 229 RDIARLQTDLHIDGNLQQL 247 +A ++T++ +D QL Sbjct: 240 YQLATIRTNVMLDITYDQL 258 >UniRef50_Q5HCC8 DNA polymerase I n=14 Tax=Rickettsiales RepID=Q5HCC8_EHRRW Length = 865 Score = 110 bits (274), Expect = 6e-23, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 44 HAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEA 103 + V FD ++ +RH P YK+ R +PE+L + P LR A + +G EA Sbjct: 57 YLVVAFDTGGKN--FRHDIYPQYKSNRIKLPEDLISQFPLLREAVNALNISYEEVAGYEA 114 Query: 104 DDLAATLAVKVTQ-AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQP 162 DD+ ATL+ ++ G + T+V++DK QLL + I D + +++ + +FG+ Sbjct: 115 DDVIATLSKNYSKFDGIKVTVVTSDKDLLQLLEHNIHIFDPVKNKYIVEDDVQDKFGISS 174 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETH 221 +L D+ L G +S +PGV GIG K+A +LL F SL+ + A+ + K R+ + + Sbjct: 175 SKLLDFLSLTGDTSDNIPGVPGIGIKTAAKLLNNFGSLDNLLSQPHAIEKNKCRESIIKY 234 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLR 248 ++ A L R + L +++D N+++ R Sbjct: 235 QDQAILSRQLLTLCDTVNLDNNIEKYR 261 >UniRef50_UPI0001744922 DNA polymerase I n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744922 Length = 971 Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 19/263 (7%) Query: 5 LLIVDALNLIRRIH------AVQGSPCVETCQ-----HALDQLIMHSQPTHAVAVFDDEN 53 L ++D++ L+ R H + S V T +AL ++ + +PTH A FD Sbjct: 9 LFLLDSMALLYRAHFALIRKPIFTSDGVNTSALFGYANALLDILQNQKPTHLGAAFDTSA 68 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + RH P YKA R MPE+L +PA + + +P G EADD+ TLA Sbjct: 69 PTP--RHTMFPAYKAQREEMPEDLSVAIPAAKRLLKAMRIPVLEVDGWEADDIIGTLAHH 126 Query: 114 V-TQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGV-QPQQLPD 167 + G + +V+ DK + QL++ I R L + + +GV P Q+ D Sbjct: 127 AEARGGFETYMVTPDKDFGQLVTENTLIYKPGRQGADTEILGVKEVCERWGVSNPGQVID 186 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 GL G +S +PG+AG+G K+A +L+ +F S+E + + +D + K + K++ EMA + Sbjct: 187 LLGLMGDASDNIPGIAGVGEKTAAKLIQQFGSVEAMLDRVDEIEGKLKDKVKAGAEMARI 246 Query: 228 CRDIARLQTDLHIDGNLQQLRLV 250 + +A + D + L L L+ Sbjct: 247 SKQLATIMVDAPLTVQLDDLALL 269 >UniRef50_Q2GBP7 DNA polymerase I n=10 Tax=Alphaproteobacteria RepID=Q2GBP7_NOVAD Length = 945 Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 105/215 (48%), Gaps = 9/215 (4%) Query: 42 PTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGN 101 PTH + D S +R+ YKA RPP PE+L + P +R A + C Sbjct: 57 PTHLAVILDKAGTS--FRNDLYDQYKANRPPPPEDLVPQFPLIRDATRAFSLACIEEDAL 114 Query: 102 EADDLAATLAVKVTQAGHQATIVSTDK------GYCQLLSPTLRIRDYFQKRWLDAPFID 155 EADDL A+ A T G TIVS+DK G C + + D + + +D P + Sbjct: 115 EADDLIASYARAATLRGWDVTIVSSDKDLMQLVGKCATGGGCIDMLDTMKNQRIDIPEVV 174 Query: 156 KEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKW 214 ++FGV P+++ D L G S VPG+ GIGPK+AT+L+ E LE + A K Sbjct: 175 EKFGVPPEKVGDVLALMGDSVDNVPGIRGIGPKTATKLIQEHGDLESALAAAPTMKAGKL 234 Query: 215 RKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 R+ L EMA L R + L+ D + ++ +L Sbjct: 235 RESLIEQAEMARLSRVLVALKEDCPLPVPIEDFKL 269 >UniRef50_Q04G12 DNA polymerase I n=28 Tax=Lactobacillales RepID=Q04G12_OENOB Length = 903 Score = 109 bits (272), Expect = 9e-23, Method: Composition-based stats. Identities = 64/225 (28%), Positives = 118/225 (52%), Gaps = 14/225 (6%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 DQ++ P +A+ +D ++ +R + DYK R P EL ++ P LR + G Sbjct: 57 FDQVVEKMNPDYALVAWDAGKGATTFRAKIFDDYKGDRQTTPPELSEQFPYLRKMVDLHG 116 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIR---------DY 143 + + G EADD+ T + +AG + TI++ D+ QL++ + + D Sbjct: 117 IHSYELPGFEADDIIGTYSKLAEKAGLKTTIITGDRDLTQLVTDNVSVNVTKKGVTELDR 176 Query: 144 FQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGI 203 + ++L +K G+ P Q+ + L G +S PGV +G K+A +LL EF SL+GI Sbjct: 177 YTPKFL----AEKWGGITPSQVIEMKSLTGDTSDHYPGVTKVGLKTAIKLLNEFGSLDGI 232 Query: 204 YENLDAV-AEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 Y+++D++ K ++ L KE A+ ++A ++TD ++ +++L Sbjct: 233 YQHIDSMKTSKLKENLLNDKESAYRAHELATIRTDAPVELEMKEL 277 >UniRef50_C6C0R6 DNA polymerase I n=3 Tax=Desulfovibrio RepID=C6C0R6_DESAD Length = 904 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 116/217 (53%), Gaps = 5/217 (2%) Query: 35 QLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVP 94 ++I +P + V + D + ++ +RH+ YKA RPPMP++L ++ L+ A GVP Sbjct: 53 KVIKEEKPKYLVFILDGKGKN--FRHELYDQYKAQRPPMPDDLRSQIEPLKEALNVIGVP 110 Query: 95 CWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFI 154 + G EADD A+LA + ++ I+ DK Q L + + D K+ Sbjct: 111 LIVSEGEEADDCIASLAARY-KSERPVVILGADKDLKQCLDENVFMWDPAGKKEKITSLA 169 Query: 155 D--KEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE 212 D ++ ++P+Q D+ L G S+ +PGV G+G +AT+++ E+ +LE I +N D + Sbjct: 170 DFREDTKLEPEQWADFQALVGDSADNIPGVPGVGKVTATKIMAEYPTLEDIRDNYDKLKP 229 Query: 213 KWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 +KK++ E F+ R++ R++ D +L+Q L Sbjct: 230 AIQKKMKDELENIFVYRELTRMRLGSCSDCDLKQCEL 266 >UniRef50_B0PCZ2 DNA polymerase I n=3 Tax=Clostridiales RepID=B0PCZ2_9FIRM Length = 874 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 121/259 (46%), Gaps = 19/259 (7%) Query: 2 AVHLLIVDALNLIRRIHAVQGSPCVETCQHA---------LDQLIMHSQPTHAVAVFDDE 52 AV LL VD +++ R + + + + L +++ ++P FD Sbjct: 6 AVKLLAVDGNSILNRAYYGIKALTTKNGEFTNGIYGFLSILLRVLDEAEPDAVAVAFD-- 63 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 R+ +RH+ YKA R MP EL ++ L+ G + G EADD+ TLA Sbjct: 64 LRAPTFRHKLYDGYKAQRKGMPHELASQLEPLKELLGALGFQIVTCEGYEADDILGTLAR 123 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------RWLDAPFIDKEFGVQPQQLP 166 + G I + D+ QL+ P + +R K D + +++GV+P QL Sbjct: 124 SSAETGWDCVIATGDRDSLQLVGPHVSVRLATTKMGQPASTLYDETAVREKYGVEPAQLV 183 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK--WRKKLETHKEM 224 D L G +S +PGVAGIG K+A L+ ++ ++ IY LD + K RKKL KEM Sbjct: 184 DVKALMGDASDNIPGVAGIGEKTALSLIGQYHDIDAIYAQLDTLEIKPGVRKKLGEGKEM 243 Query: 225 AFLCRDIARLQTDLHIDGN 243 A+ R + + D ID + Sbjct: 244 AYTSRKLGEICCDAPIDAS 262 >UniRef50_B2RLP5 DNA polymerase I n=2 Tax=Porphyromonas gingivalis RepID=B2RLP5_PORG3 Length = 926 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 122/258 (47%), Gaps = 23/258 (8%) Query: 1 MAVHLLIVDALNLI-RRIHAVQGSPCVETCQH----------ALDQLIMHSQPTHAVAVF 49 M L ++DA LI R +A SP +++ L ++ P H VF Sbjct: 1 MTERLFLLDAYALIFRAYYAFIRSPRIDSTGRDTGAVFGFALTLLDILEKESPEHIAVVF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D S +RH+ +YKA R PE + +P ++ +P EADD T Sbjct: 61 DPPGGS--FRHREYAEYKAQREETPEGIRIAVPLIKEMLAAFRIPAVEVPDFEADDTIGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR------WLDAPFIDKEFGVQ-P 162 LA + + G +V+ DK + QL+S RI+ Y K W A +K FG+ P Sbjct: 119 LAKQAEEQGLAVRMVTPDKDFGQLVSE--RIKIYRPKSGGGYETWGPAEVCEK-FGLSIP 175 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHK 222 Q+ DY GL G SS +PG GIG K+A +LL E+ S++GIY + D + KK++ + Sbjct: 176 GQMIDYLGLVGDSSDNIPGCKGIGAKTAEKLLAEYGSIDGIYAHQDELKGAVAKKIQEGE 235 Query: 223 EMAFLCRDIARLQTDLHI 240 E R +A ++TD I Sbjct: 236 EQTRFSRYLATIRTDAPI 253 >UniRef50_O08307 DNA polymerase I n=4 Tax=Chloroflexi (class) RepID=DPO1_CHLAA Length = 942 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 111/216 (51%), Gaps = 10/216 (4%) Query: 41 QPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSG 100 +P +A FD +R +YKAGR PEE + + ++ + +P ++ G Sbjct: 53 RPDYAAVAFD---VGRTFRDDLYAEYKAGRAETPEEFYPQFERIKQLVQALNIPIYTAEG 109 Query: 101 NEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI---RDYFQKRWL---DAPFI 154 EADD+ TLA + T+ G I++ D QL++ +R+ Y K + D + Sbjct: 110 YEADDVIGTLARQATERGVDTIILTGDSDVLQLVNDHVRVALANPYGGKTSVTLYDLEQV 169 Query: 155 DKEF-GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK 213 K + G++P QL D GL G +S +PGV GIG K A LL +F+SL+ + E +DA ++ Sbjct: 170 RKRYDGLEPDQLADLRGLKGDTSDNIPGVRGIGEKGAIALLKQFRSLDALLEQIDAAPKR 229 Query: 214 WRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 ++ L E A R +A + TD+ + +L+ R+ Sbjct: 230 YQTLLREQAEAARFSRQLATIVTDVPVQLDLEAARI 265 >UniRef50_B5JW38 Exodeoxyribonuclease IX n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW38_9GAMM Length = 382 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 1/200 (0%) Query: 35 QLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVP 94 QL+ QP+H FD + WR + YKA RPP P EL + R + G+ Sbjct: 44 QLLHSEQPSHIGFAFD-LCHAGNWRREIDAQYKANRPPPPAELKRQFAHCRELLQASGLA 102 Query: 95 CWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFI 154 C+ + EADD+ T + + + G +TI++ DK QL+ + + + LD I Sbjct: 103 CFGSDRFEADDIIGTFSRSLREQGFVSTIITGDKDLTQLIGEGDEWWEVARNKRLDYRGI 162 Query: 155 DKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW 214 K++G+ P+Q+ D L G S + GV G+G K+A LL +F ++G+ N+DA+ E Sbjct: 163 HKQWGIYPEQVADLLALVGDKSDNIAGVPGVGVKTAANLLKKFGDIDGVLNNIDAIGEMK 222 Query: 215 RKKLETHKEMAFLCRDIARL 234 + + + + + +D RL Sbjct: 223 FRSAKRIENLVRMHQDTIRL 242 >UniRef50_D1PTJ0 DNA-directed DNA polymerase I (Fragment) n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PTJ0_9BACT Length = 661 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/262 (28%), Positives = 127/262 (48%), Gaps = 20/262 (7%) Query: 5 LLIVDALNLI-RRIHAVQGSPCVET-----------CQHALDQLIMHSQPTHAVAVFDDE 52 L ++DA +I R +A P + + C + L+++I PTH FD Sbjct: 4 LFLLDAYAIIFRSYYAFIKRPTINSKGLNTSAILGFC-NTLNEIIEKENPTHIGVAFD-- 60 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +RH+ P YKA R PE++ +P ++ + +P +G EADD+ TLA Sbjct: 61 -YGKTFRHEAFPPYKAQREATPEDIKLSVPHIQDILKAMHIPILQVNGFEADDVIGTLAT 119 Query: 113 KVTQAGHQATIVSTDKGYCQLLSP---TLRIRDYFQKRWLDAPFIDKEFGV-QPQQLPDY 168 + + G + +++ DK Y QL+ R R + I ++G+ Q+ D Sbjct: 120 QAAEKGIETYMLTPDKDYGQLIRQHVYMFRPRHGGGYDKIGEKEIQAKYGIASAAQVIDL 179 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G SS PG G+G K+A +L+ EF + E + EN D + K R+K+E + + Sbjct: 180 LALMGDSSDNYPGCPGVGEKTAVKLIHEFGTCENLIENSDQLKGKMREKVENAVDDIKMS 239 Query: 229 RDIARLQTDLHIDGNLQQLRLV 250 + +A ++TD+ I+ NL +L++ Sbjct: 240 KFLATIRTDVPIELNLDELKMT 261 >UniRef50_Q0F0N6 DNA polymerase I n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0N6_9PROT Length = 917 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 112/224 (50%), Gaps = 12/224 (5%) Query: 4 HLLIVDALNLI-RRIHAV-------QGSPCVETCQHA--LDQLIMHSQPTHAVAVFDDEN 53 HL+++D N + R HAV +G P + L ++ PTH FD Sbjct: 3 HLVLIDGPNYVFRAFHAVRHNLTNSKGEPTNAVFGYVQMLRSILKELGPTHVAVAFDP-- 60 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +R++ DYKA RPPMPE+L + P++ + + EADD+ ATLA + Sbjct: 61 KGGTFRNRMYADYKAHRPPMPEDLAAQWPSIFDVTDAFRLNRICVEDYEADDVIATLARQ 120 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 G +IVSTDK QL+ + + D +++ + + +GV P ++ D LAG Sbjct: 121 AEARGWDVSIVSTDKDLMQLVGERIWMLDTMKRKDYGPEEVKERWGVGPDRIQDLLALAG 180 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKK 217 S+ +PGV GIGPK+A LL + LEG+ + ++ R++ Sbjct: 181 DSADNIPGVPGIGPKTAVTLLEAYGDLEGVLTRAGEIKQQKRRE 224 >UniRef50_A4RYY2 Predicted protein (Fragment) n=3 Tax=Mamiellales RepID=A4RYY2_OSTLU Length = 233 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 24/231 (10%) Query: 5 LLIVDALNLIRRIH---AVQGSPCVETCQHALDQLIMHS-----------QPTHAVAVFD 50 L++VD L+ + R + +GS T D +++S +PTH D Sbjct: 1 LILVDGLSFVFRAYYGWNARGSGEGLTNSAGEDTSVLYSYAHTICSLLELKPTHLAVCMD 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + ++ +RH+ +YKA RPP PE L + +P + GVP SG EADD+ T+ Sbjct: 61 AKGKT--FRHEMFVEYKANRPPTPEPLLELIPKVEQLVRDMGVPLLRLSGVEADDIIGTV 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDA--PFIDKEFG------VQP 162 + + + AG + +I S DK + QLL P ++ + D PF +F ++P Sbjct: 119 SRRASDAGFRVSICSPDKDFYQLLGPKTKMLKPSKSSKGDPFDPFTVDDFRAMHNNVIEP 178 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK 213 +Q D+ L G S+ +PGV G+GPK+A LL ++ +E N V K Sbjct: 179 EQFIDFLALVGDSADNIPGVEGVGPKTALALLEQYGDIESALANAANVKGK 229 >UniRef50_A0YAX3 Exodeoxyribonuclease IX n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAX3_9GAMM Length = 297 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 9/212 (4%) Query: 35 QLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVP 94 + + SQP + +AV DE+ S +R+ P YK R E L ++ A + E G+ Sbjct: 45 KFLTSSQPQY-LAVAYDESLGSCFRNDIYPAYKKSRNLPDESLSYQLTACKGLTEIFGIS 103 Query: 95 CWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLL-SPTLRIRDYFQKRWLDAPF 153 ++ EADD+ ATLA + + GH +VS DK QLL + + D+ R +D Sbjct: 104 SLASDRYEADDIIATLAGRAQRDGHNIVVVSKDKDLGQLLLKESDYLWDFAGDRKIDRDM 163 Query: 154 IDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK 213 FGV P+QL DY L G S +PGV GIG K+A+ LL +F S++ + N D VAE Sbjct: 164 FHGHFGVWPEQLEDYLALVGDSVDDIPGVPGIGKKTASSLLEKFSSIDRLLHNADGVAES 223 Query: 214 WRK-------KLETHKEMAFLCRDIARLQTDL 238 + KLE +++ + + + RL ++ Sbjct: 224 GVRGAAMIINKLEDYRDQMEMAKQLVRLDQNV 255 >UniRef50_A8FKC7 DNA polymerase I n=20 Tax=Campylobacter RepID=A8FKC7_CAMJ8 Length = 879 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 98/195 (50%), Gaps = 2/195 (1%) Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 VF +++ +R + P+YK R P P EL +++P E+ G S G EADD+ Sbjct: 54 VFALDSKGKTFRSEIDPNYKQNRTPPPPELLEQIPICIEMIEKMGFISVSQEGYEADDII 113 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSP-TLRIRDYFQKRWLDAPFIDKEFGVQPQQLP 166 A+ I++ DK QL+ I K D +++GV+P Q+ Sbjct: 114 ASFVRTCEDRDIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEAACLEKYGVKPHQIR 173 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMA 225 D+ L G SS +PGV GIG K A LL EF S+EGIYENL V E+ R L KE A Sbjct: 174 DFLALCGDSSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLVRNERSRNLLLEGKENA 233 Query: 226 FLCRDIARLQTDLHI 240 FL + +A L +L + Sbjct: 234 FLSKKLASLYENLEV 248 >UniRef50_UPI00016BFC66 DNA polymerase I n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFC66 Length = 865 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 129/262 (49%), Gaps = 24/262 (9%) Query: 5 LLIVDALNLIRRIHAVQGSPCVETCQ-----------HALDQLIMHSQPTHAVAVFDDEN 53 +++VD ++ R A G P + T + L L+ QP FD Sbjct: 3 IMLVDGFSIAYR--AFYGMPLLSTKEGIFTNAIYGFLKILFNLLDTHQPDALAVAFDFA- 59 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RHQ YKA R PMP EL ++P L+ G+ S G EADD+ TLA Sbjct: 60 -APTFRHQYALTYKATRKPMPSELQPQIPLLQDLLSAMGISHISAPGFEADDILGTLATA 118 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR-------WLDAPFIDKEFGVQPQQLP 166 A H IVS D+ Q+ + +++I K+ + A + K +GV P +L Sbjct: 119 AAAAKHDVLIVSGDRDLLQIATDSIQIXIPKTKQTGTEIESYYAADVVAK-YGVIPTELI 177 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMA 225 D L G +S +PGV G+G K+A +L+ E+++++ +Y NL+ + K ++ L T+K+ A Sbjct: 178 DVKALMGDASDNIPGVKGVGEKTALKLIAEYKNIDTLYANLENIKGAKLKENLATYKDSA 237 Query: 226 FLCRDIARLQTDLHIDGNLQQL 247 + + +A ++ D+ I+ LQ Sbjct: 238 YDSKFLATIKIDIPINFTLQDF 259 >UniRef50_UPI0001C32326 DNA polymerase I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32326 Length = 884 Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 5/193 (2%) Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +R R + P+YKA R P+ + P L E G S G EADD+ ATLA Sbjct: 83 DRGHSGRREVYPEYKAQRSSRPDLFKQQWPHLEPLVESFGYQNVSLDGYEADDVIATLAE 142 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 + AG +V+ D+ QL+ ++I R + R D + +G+ P+ +PD+ Sbjct: 143 RAKAAGIPVMVVTGDRDSFQLVDEGVQIMATSRGITETRTYDRQGVIDRYGIPPELVPDF 202 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFL 227 GL G +S +PGV GIG K+A QLL +F LEG+ N + A K R+ L H E A + Sbjct: 203 IGLKGDTSDNIPGVPGIGDKTAAQLLNDFGDLEGVLANAHTIRARKRRENLIEHAEDARV 262 Query: 228 CRDIARLQTDLHI 240 + +A ++ DL + Sbjct: 263 SKQLATMRRDLEV 275 >UniRef50_A8USN7 DNA polymerase I 3'-5' exo domain n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8USN7_9AQUI Length = 291 Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 14/255 (5%) Query: 4 HLLIVDALNLIRR-------IHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENR 54 + ++DA + I R + G P + AL ++ +P + V VFD + Sbjct: 5 EIYLIDASSFIYRGFFALPPLTTKDGFPTGAIYGFLRALLSIMKSERPEYLVVVFD--HP 62 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + R +YKAGRP MP+ L ++P ++ G+P G EADDL A LA + Sbjct: 63 APTKRDSLFKEYKAGRPSMPDPLRLQIPVIKELLWLMGIPTLEVEGYEADDLIAILAKRF 122 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 ++ G + I + DK QL+S + + + + + +FGV PQ++ DY L G Sbjct: 123 SEKGFKVKIYTPDKDMLQLVSENVVVINPMNWEVFNPDKVKDKFGVPPQKVADYLALVGD 182 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARL 234 VPGV G+GPK+A +L+ +F + I E + + + E +E L + + Sbjct: 183 KIDNVPGVRGVGPKTAVKLIEKFGGVPNILERWEEFKKIYP---EAKREELELSYQLVKP 239 Query: 235 QTDLHIDGNLQQLRL 249 TD + + + +L Sbjct: 240 MTDAEVSLSDEDFKL 254 >UniRef50_A0JWM3 DNA polymerase I n=7 Tax=Actinobacteria (class) RepID=A0JWM3_ARTS2 Length = 955 Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 7/234 (2%) Query: 19 AVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELH 78 A Q + + L LI +PTH FD + ++ R +YK GR P E+ Sbjct: 93 AGQHTNAIHGFTSMLINLIKEQKPTHVAVAFDVSDETT-HRKAEYSEYKGGRNETPREMS 151 Query: 79 DEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTL 138 ++ + G+ G EADD+ ATLA +AG++ +V+ D+ QL++ + Sbjct: 152 GQIDLIDKVMGAWGIKTIKMPGYEADDVLATLAAMGEKAGYEVLLVTGDRDAFQLITDNV 211 Query: 139 RIRDYFQKRW-----LDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQL 193 + Y +K LDAP I +++ V P Q D L G S+ +PGV G+GPK+A + Sbjct: 212 FVL-YPRKGVSDIPRLDAPAIQEKYFVSPAQYSDLAALVGESADNLPGVPGVGPKTAAKW 270 Query: 194 LVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 + + LEG+ E+LD + K L + + R + RL TDL + L L Sbjct: 271 INLYGGLEGVLEHLDKIGGKVGDSLRENVDAVKRNRRLNRLHTDLELPVTLDDL 324 >UniRef50_Q6X9S0 DNA polymerase I n=3 Tax=Bacillales RepID=Q6X9S0_9BACL Length = 903 Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 6/229 (2%) Query: 25 CVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPAL 84 V + L +LI +PTH + FD + +RH+ YKAGR P EL ++ P + Sbjct: 33 AVYGFANMLLKLIEEERPTHFLVAFDAGK--ATFRHREYEAYKAGRLQTPPELSEQFPYI 90 Query: 85 RAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI---- 140 R GV EADD+ TLA + G +V+ D+ QL+S + + Sbjct: 91 RELVRAFGVASGELEEYEADDMIGTLAKRAEAEGVDTLVVTGDRDLLQLVSDRVTVALTR 150 Query: 141 RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSL 200 + + D I +E+G P ++ D GL G +S +PGV G+G K+A +LL ++ SL Sbjct: 151 KGITETERYDPARIREEYGFDPDRIRDLKGLMGDASDNLPGVPGVGEKTALKLLRQYGSL 210 Query: 201 EGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 E + E+ +A K + L H + A L + +A + + + LRL Sbjct: 211 ESVLEHASEIAGKLGENLRAHADAARLSKRLATIDCAVPLQSGWDWLRL 259 >UniRef50_C1N262 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N262_9CHLO Length = 565 Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 139/330 (42%), Gaps = 95/330 (28%) Query: 4 HLLIVDALNLIRR----------IHAVQGS--PCVETCQHALDQLIMHSQPTHAVAVFDD 51 H+ +VD ++L+ R + A G + + HA+ I+ P+H FD Sbjct: 167 HVALVDGMSLVFRAFYGWRNREPLLATNGEDLSVMYSVTHAI-LAILELAPSHVAVCFDA 225 Query: 52 ENRS-------------SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWST 98 + ++ S W H+ DYKA RPP P EL +++P + A + GVP + Sbjct: 226 KGKTFRRVLYTGSHTTPSAW-HEMFTDYKANRPPTPPELKEQIPKVVEAVRRMGVPVLTI 284 Query: 99 SGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLR-----------IRDYFQKR 147 SG EADD+ T+A + +AG TIVS DK + QLL P +R ++ + Sbjct: 285 SGVEADDIIGTIARRSVEAGLHVTIVSPDKDFFQLLGPRVRQLRPNGKNYDAAKEAAARD 344 Query: 148 WLDA-------------------PFIDKEFGVQ-----PQQLPDYWGLAGISSSK----- 178 DA PF +++F + P Q D + G +S Sbjct: 345 GEDAASDGFGDPTHRNVTGKGLVPFTERDFRAEFSDLDPAQFVDVLAMVGDASDNVPGAV 404 Query: 179 -------------------------VPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK 213 VPGV GIGPK+A +LL E+ ++EG N + K Sbjct: 405 PRFQSRHTSTPFNSASDAFQLHPDIVPGVEGIGPKTAPKLLSEYGNIEGAIANAGGIKNK 464 Query: 214 -WRKKLETHK--EMAFLCRDIARLQTDLHI 240 R+ L + + A+LCR + +++T L + Sbjct: 465 RARESLASERGAASAYLCRSLVKIRTRLSV 494 >UniRef50_A6TSU6 DNA polymerase I n=13 Tax=Clostridiaceae RepID=A6TSU6_ALKMQ Length = 897 Score = 107 bits (266), Expect = 5e-22, Method: Composition-based stats. Identities = 65/216 (30%), Positives = 116/216 (53%), Gaps = 11/216 (5%) Query: 42 PTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGN 101 P + FD ++ +RH+ YKAGR MP EL +++ L+ + + G Sbjct: 52 PQYISVAFD--RKAPTFRHKSFEGYKAGRKKMPPELAEQLEPLKEVLDAFHIYRVEIDGF 109 Query: 102 EADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL------DAPFID 155 EADDL TL+ + + IV+ DK QL S ++I F K+ + D I Sbjct: 110 EADDLIGTLSKYAEEQDIECLIVTGDKDALQLASEKVKI--LFTKKGISSLEIYDPQKIM 167 Query: 156 KEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKW 214 +++ V P+Q D GL G +S +PG+ G+G K+A +LL +F ++E + +N + A+K Sbjct: 168 EQYEVTPEQFIDLKGLMGDNSDNIPGIPGVGEKTAIKLLKQFGTVENLIQNAGEISAQKL 227 Query: 215 RKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 R+K+E + E A + + +A + T++ ++ L++L+ + Sbjct: 228 REKVENNTEQAMMSKRLATIMTNVPVEIELEKLKKI 263 >UniRef50_C1A095 DNA polymerase I n=60 Tax=Actinomycetales RepID=C1A095_RHOE4 Length = 915 Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 6/238 (2%) Query: 16 RIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPE 75 + H+ Q + V L L+ QPTH A FD ++ +R P+YKA R P+ Sbjct: 50 KTHSGQATNAVYGFTSMLINLLRDEQPTHLAAAFDVSRQT--FRADLFPEYKAQRAKAPD 107 Query: 76 ELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLS 135 E ++ + G+P + G EADD+ ATL + G++ +V+ D+ QL++ Sbjct: 108 EFKGQIDITKDVLGALGIPVMAEEGFEADDVIATLTTQAEALGYRVLVVTGDRDSLQLVT 167 Query: 136 PTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSAT 191 + + + + +++++ + P Q PD+ L G S +PG+ G+G K+AT Sbjct: 168 DNVTVLYPKKGVSELTRFTQTAVEEKYSLTPSQYPDFAALRGDPSDNLPGIPGVGEKTAT 227 Query: 192 QLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 + + E+ L+G+ +N+D V K L + L R + + D+ + +QL L Sbjct: 228 KWIREYGDLQGLVDNVDKVRGKVGDSLRENLANVLLNRQLTEMVRDVPLPYTPEQLVL 285 >UniRef50_B4S5F3 DNA polymerase I n=12 Tax=Chlorobiaceae RepID=B4S5F3_PROA2 Length = 950 Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 13/214 (6%) Query: 42 PTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGN 101 P + FD +R +RH+R YKA RP PE+L ++ + E +P G Sbjct: 85 PDYLAVAFD--SREKTFRHERYDAYKANRPQPPEDLITQLDFIFRLIEAFNIPILKQPGY 142 Query: 102 EADDLAATLAVKVTQAGHQATIVSTDKGYCQL-------LSPTLRIRDYFQKRWLDAPFI 154 EADDL T A + + + IVS DK QL L P R + + A + Sbjct: 143 EADDLIGT-AAREFEPECRINIVSPDKDMTQLIHDGVTLLKPGKRQNELLR---FGAAEL 198 Query: 155 DKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW 214 +E G+ P Q D L G SS +PG GIGPK+A++LL+ + SL+ I +NL+ + + Sbjct: 199 KEELGIAPDQFIDLLTLTGDSSDNIPGAKGIGPKTASKLLLSYGSLDEISKNLEKLPPRT 258 Query: 215 RKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 RK LE L RD+ ++TD+ + L L+ Sbjct: 259 RKSLEEFLPERELIRDLVTIKTDIDLQTPLASLQ 292 >UniRef50_D0LQ66 DNA polymerase I n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQ66_HALO1 Length = 930 Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 77/243 (31%), Positives = 118/243 (48%), Gaps = 16/243 (6%) Query: 15 RRIHAVQGSPCVETCQHA--LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPP 72 +R+ G P +A L +L + +P VFD R+ +R++ YKA R Sbjct: 26 QRLSTKGGMPTAALFVYAQMLIRLFIDERPERIAVVFDPPGRT--FRNELDDAYKATRRE 83 Query: 73 MPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQ 132 PE+L ++P E G P G EADD+ ATL + G + S DK Q Sbjct: 84 TPEDLKPQLPYFSKLTEALGWPVICEQGVEADDVIATLVGRARAQGWDVVVYSGDKDLMQ 143 Query: 133 LLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQ 192 L+ + + D + DA ++K+FGV P +L DY L G S VPG+ G+G K+A + Sbjct: 144 LVDEGVTVIDSLRSIVYDAARVEKKFGVPPAKLRDYLALVGDVSDNVPGMPGVGAKTAAK 203 Query: 193 LLVEFQSLEGIY---ENLDA-VAEKWR-----KKLETHKEMAFLCRDIARLQTDLHIDGN 243 LL + S++GI E L + E++R ++L +E+ L D+A TD +D Sbjct: 204 LLGSYDSIDGILAHNEELKGKMGERFRDPEALERLARSRELVTLRSDVA---TDAELDAL 260 Query: 244 LQQ 246 +QQ Sbjct: 261 VQQ 263 >UniRef50_B1ZX82 5'-3' exonuclease n=3 Tax=Verrucomicrobia RepID=B1ZX82_OPITP Length = 320 Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 79/245 (32%), Positives = 121/245 (49%), Gaps = 36/245 (14%) Query: 6 LIVDALNLIRR-IHAV------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRSS 56 L+VD NL R +A+ G P + +L L ++P V FD Sbjct: 5 LLVDGFNLAYRCFYAIPELTRADGFPTNALHGWLKSLWMLADQTKPDACVVFFD-----L 59 Query: 57 GWRHQRLP---DYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 G RL DYKA R MPE L ++P +++ G G E+DDL A+ AV Sbjct: 60 GGAQDRLALHADYKAQREEMPESLARQLPYVKSLTRAMGCVGVEQEGVESDDLLASQAVA 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRI-------RDYFQKRWLDAPFIDKEFGVQPQQLP 166 +++AGH+ IVS+DK + Q++ ++I R +DA + +FGV P+ + Sbjct: 120 LSRAGHEVLIVSSDKDFAQIVDERVKIMLPPPTANPKLGWRLMDAAGVQAKFGVPPRMIA 179 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIY------------ENLDAVAEKW 214 DY L G +S +PG+AG+GPK+A + L EF++LEG+ E + A A+K Sbjct: 180 DYLALVGDTSDNIPGLAGVGPKTAAKWLNEFETLEGVMAHCAELKPERFREPICAEADKL 239 Query: 215 RKKLE 219 R+ L+ Sbjct: 240 RRNLK 244 >UniRef50_D0L9T3 DNA polymerase I n=2 Tax=Corynebacterineae RepID=D0L9T3_GORB4 Length = 949 Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 116/224 (51%), Gaps = 17/224 (7%) Query: 21 QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDE 80 Q + V L L+ +PTH A FD ++ +R + P YKA R P+E + + Sbjct: 53 QTTNAVYGFTSMLINLLRDEEPTHIAAAFDVSRKT--FRSEMYPAYKAQRSKSPDEFNGQ 110 Query: 81 MPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI 140 + + + G+P + G EADD+ ATLA + G+ +V+ D+ QL++ ++ + Sbjct: 111 VDLTKEVLDALGIPVMAIEGYEADDIIATLATQADAEGYSVLVVTGDRDSLQLVNDSVTV 170 Query: 141 RDYFQK------RWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLL 194 Y +K R+ A ++K++G+ P Q PDY L G S +PG+ G+G K+A++ + Sbjct: 171 L-YPRKGVSELTRFTPAE-VEKKYGLTPTQYPDYAALRGDPSDNLPGIPGVGEKTASKWI 228 Query: 195 VEFQSLEGIYENLDAVAEKWRKKL-------ETHKEMAFLCRDI 231 E+ SL + +++D V K L +T++++ L RD+ Sbjct: 229 REYGSLASLVDHVDEVKGKVGDALRANLASVQTNRQLTELVRDM 272 >UniRef50_C1TPP4 DNA polymerase I n=2 Tax=Synergistaceae RepID=C1TPP4_9BACT Length = 854 Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 78/256 (30%), Positives = 117/256 (45%), Gaps = 18/256 (7%) Query: 4 HLLIVDALNLIRRIHAVQGSPCVETCQ--HALDQLIMHSQPTHAVAVFDDENRSSGWRHQ 61 H L A I + A G+P + L ++ P VFD ++ +RH+ Sbjct: 12 HGLAFRAFYAIPELTAPDGTPTNALVGFFNMLSKIKKEWAPQSLSVVFDAPGKT--FRHE 69 Query: 62 RLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQA 121 +YK GR P PEE ++P L+ G+P G EADD+ ++ + G Sbjct: 70 MFEEYKKGRKPTPEEFKVQLPILKKMLGLLGIPVICRPGVEADDVIGAVSREYAYKGTPV 129 Query: 122 TIVSTDKGYCQLLS-------PTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 +V++DK Q+L P I + RW DA E+G P ++ DY L G Sbjct: 130 LVVTSDKDMLQILDEGITVIRPGKGISSF--NRW-DAETFQGEYGFPPARMADYLALVGD 186 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARL 234 S VPGV GIG K+A +LL ++ LEGI + + RKKLE + ++A + + Sbjct: 187 SVDNVPGVPGIGDKTARRLLGKYGDLEGILAHTADLTAGQRKKLEENADLA----RKSLI 242 Query: 235 QTDLHIDGNLQQLRLV 250 T L +DG + LV Sbjct: 243 LTTLSVDGAPDDVDLV 258 >UniRef50_Q67KY2 DNA polymerase I n=1 Tax=Symbiobacterium thermophilum RepID=Q67KY2_SYMTH Length = 283 Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 118/247 (47%), Gaps = 14/247 (5%) Query: 5 LLIVDALNLIRRIHAV------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRSS 56 +L+VD + R A+ +G P V L +L+ +P+H VAV D + Sbjct: 1 MLLVDGGLMFRTFFALPPMTDPKGRPVNAVYGFVSMLLRLLATLRPSH-VAVAADSPVAE 59 Query: 57 GWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQ 116 R P YKA RP P +L + LR + G EADDL T+A Sbjct: 60 NRRAVLYPPYKANRPECPPDLAPQFALLREVLAALNITVVGVRGYEADDLMGTMARMAEA 119 Query: 117 AGHQATIVSTDKGYCQLLS---PTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 G + +++ D+ QLLS ++ Q D E+G+ P QL D GLAG Sbjct: 120 EGMEVILLTGDRDAFQLLSGRTAVQYVKRLNQTITYDVARFVTEWGILPSQLADLKGLAG 179 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR 233 +S +PG+ GIGPK+A +LL ++ +LE + + A K R++LE +E+A L + +A Sbjct: 180 DASDNIPGIRGIGPKTAVRLLQQYVTLEAVLAHAHAQPGKLRQRLEEGREIALLSKRLAT 239 Query: 234 LQTDLHI 240 + D H+ Sbjct: 240 I--DRHV 244 >UniRef50_A9NF42 DNA polymerase I n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF42_ACHLI Length = 880 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 65/223 (29%), Positives = 118/223 (52%), Gaps = 11/223 (4%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 +D++I S +H + FD + RH+ DYKAGR MPEEL ++P + + G Sbjct: 46 IDKIIEISN-SHMLIAFDTGEPTH--RHKSYDDYKAGRKEMPEELGSQIPLIHELIKYLG 102 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLD-- 150 + +S +G EADD+ TLA +AG++ + S+D QL++ + + + K+ + Sbjct: 103 IKEYSMAGYEADDIIGTLAKMAEKAGYKVDVFSSDYDLLQLVTEHITV--HMLKKGMRVV 160 Query: 151 ---APFIDKE-FGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYEN 206 P KE +G + D+ L G S +PGV G+G +A +L+ E+ +LE I N Sbjct: 161 ETYTPETLKETYGFSHELFIDFKALVGDKSDNIPGVPGVGEVTAKKLIAEYGTLENILNN 220 Query: 207 LDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 + + K + + T+KE A ++++ + TD+ + +L+ ++ Sbjct: 221 AEHIKGKLGENIRTNKEQAVFSKELSTILTDMPLPFDLEDTKV 263 >UniRef50_C2D755 DNA-directed DNA polymerase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D755_9ACTN Length = 1030 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 98/191 (51%), Gaps = 5/191 (2%) Query: 59 RHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAG 118 R LP YKA RPPM LH++ P ++ +P G E DD+ TLA + G Sbjct: 132 RIDMLPQYKAQRPPMDPSLHEQFPMVKELLRALQIPVVELQGWEGDDILGTLAHQGELQG 191 Query: 119 HQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEF-GVQPQQLPDYWGLAG 173 + + + D+ QL + + + + R + +D + G+ P +PD++GL G Sbjct: 192 YSMLLFTGDRDIYQLATEHVSVVSTKKGVSDVRIMTPEDVDDLYHGITPNLVPDFYGLKG 251 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR 233 +S +PGV GIGPK A L+VE+ SLEG+ + D V+ K + L H + A L + +A Sbjct: 252 DTSDNIPGVPGIGPKRAAALIVEYGSLEGVIAHADQVSGKMGENLRNHIDDARLSKRVAT 311 Query: 234 LQTDLHIDGNL 244 ++ D I +L Sbjct: 312 IRRDAPITVDL 322 >UniRef50_C1SHV2 DNA polymerase I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHV2_9BACT Length = 798 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 103/187 (55%), Gaps = 5/187 (2%) Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 VFD + ++ RH+ P+YKA R PE+L + + GV + G E DD+ Sbjct: 54 VFDAKGKNR--RHEIHPEYKATRDATPEDLGLQFGIMDELIPLLGVAYYKVDGYEGDDIM 111 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPD 167 AT+A +++ DK Q++ ++I D + + + ++FGV P+++ + Sbjct: 112 ATIAAHTKD---DVGMLTKDKDIYQIVDDRVKIYDSQKGEFFGRDMVIEKFGVPPEKVRE 168 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 LAG ++ +PGVAG+G K+A +LL E SL+GIYEN+++V K + KL +K+ A+L Sbjct: 169 LLALAGDTADNIPGVAGVGVKTAAKLLNEHGSLDGIYENIESVKGKLKDKLIDNKDSAYL 228 Query: 228 CRDIARL 234 D+ L Sbjct: 229 SYDLVGL 235 >UniRef50_B9YEU0 DNA polymerase I n=2 Tax=Cyanobacteria RepID=B9YEU0_ANAAZ Length = 982 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 12/225 (5%) Query: 37 IMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCW 96 ++ +Q A+AV D + +RH+ YKA R PE+ ++ L +P + Sbjct: 66 VITTQKPQAIAVAFDLGLPT-FRHEADDTYKADRLETPEDFIPDLENLNELLRGLNLPIF 124 Query: 97 STSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLS-----PTLRIRDYFQKRW--- 148 + G EADD+ TL+ K + AG++ I+S D+ QL+ L KR+ Sbjct: 125 TAPGYEADDVLGTLSQKASAAGYRVKILSGDRDLFQLIDGDKGITVLNFSPEALKRYANS 184 Query: 149 ---LDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYE 205 A + ++ GV P Q+ D+ L G S +PGV GIG K+A +LL + SL+GIY Sbjct: 185 ITEFQAEQVKEKLGVLPTQIVDFKALCGDKSDNIPGVRGIGEKTAVKLLNTYNSLDGIYA 244 Query: 206 NLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 LD + ++KL KE A R +A++ D+ ++ NL+ +L Sbjct: 245 KLDEITGSTQEKLIAGKEDASHSRYLAQIVVDVPLEVNLEDCQLT 289 >UniRef50_Q30VQ3 DNA polymerase I n=7 Tax=Desulfovibrionales RepID=Q30VQ3_DESDG Length = 931 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 5/206 (2%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L +L+ QP +A D + +RH YKA R PE L ++ +R G Sbjct: 117 LLKLLREEQPAYAAFFMD--GKGPTFRHALYDQYKANRSATPEPLVQQLDPIRRGVRSLG 174 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRD--YFQKRWLD 150 +P + G EADD A+LA K ++ IV DK Q + + + D Q++ LD Sbjct: 175 IPLEVSDGCEADDCIASLAAKF-KSERPVIIVGADKDLKQCIDDNVYLWDPGAKQEKLLD 233 Query: 151 APFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV 210 +E G+ P Q PD+ + G SS +PGV G+GPK+A Q+ EF +LE I EN A+ Sbjct: 234 LAGFTEETGLSPSQWPDFQAVIGDSSDNIPGVPGVGPKTAAQIFAEFPTLEAIQENEKAL 293 Query: 211 AEKWRKKLETHKEMAFLCRDIARLQT 236 +KK + +L R + L T Sbjct: 294 KPGVQKKFAGQWDNIYLYRRLTTLDT 319 >UniRef50_A9G0B1 DNA polymerase I n=3 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G0B1_SORC5 Length = 900 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 4/218 (1%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L +L+ +P + D ++ +R + P YKA RPP P +L +M R E Sbjct: 54 LTKLVDERKPAYLGVAMDSPGKT--FRDELDPRYKAHRPPPPPDLGVQMSRCREIVEAYR 111 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLL-SPTLRIRDYFQKRWLDA 151 +P + G EADDL A + + G + I S+DK QL+ + + D + + Sbjct: 112 IPIFIQEGLEADDLVAVAVARAKERGLRVVIASSDKDLMQLVDGEQVMLWDAMRDKVYGH 171 Query: 152 PFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA 211 P + +FGV P+Q+ D L G +S VPGV G+G K+A +LL +F SL IYE + V Sbjct: 172 PEVVAKFGVPPEQVRDLLALVGDTSDNVPGVPGVGLKTAAELLAQFGSLSAIYERIGEVK 231 Query: 212 E-KWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 + + R+ L+ ++ A L + + L + +L+ LR Sbjct: 232 KPRIRESLQQNEADARLSQKLVTLDGGAPVSLDLETLR 269 >UniRef50_C5CBM1 DNA polymerase I n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5CBM1_MICLC Length = 937 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 19/261 (7%) Query: 5 LLIVDALNL-IRRIHAVQGSP-CVETCQHA---------LDQLIMHSQPTHAVAVFDDEN 53 LL++D ++ R +A+ +T QH L +I +PTH FD Sbjct: 13 LLVLDGHSMAFRAFYALPAENFATDTGQHTNAVYGFTAMLLTMIRQQRPTHVAVAFDLSG 72 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +R + +YKAGR P E ++ E G+P + G EADD+ ATL+ + Sbjct: 73 PT--FRSEEYAEYKAGRSETPAEFAGQIELTVKVMEALGIPTLTLEGYEADDIVATLSAR 130 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKE-----FGVQPQQLPDY 168 +AG +A +VS D+ QL+S + Y +K D P +D + +GV P Q P+ Sbjct: 131 AEEAGWEAVVVSGDRDAFQLISERTTVL-YPKKGVSDIPPMDADAVLAKYGVAPAQYPEL 189 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G ++ +PGV G+GP A + L ++ L+G+ + + K + L H E Sbjct: 190 AALVGEAADNLPGVPGVGPGFAAKWLKQYGDLDGVLAHAHEITGKKGEALREHLEDVRRN 249 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 R + L DL + L+ +RL Sbjct: 250 RRLNALVRDLDLPIGLEAMRL 270 >UniRef50_A5EWG4 DNA polymerase I n=10 Tax=Gammaproteobacteria RepID=A5EWG4_DICNV Length = 901 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 90/177 (50%), Gaps = 6/177 (3%) Query: 41 QPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSG 100 QP + VFD ++ +RHQ PDYKA RPPMPE+L ++ L G P SG Sbjct: 53 QPNYFAVVFDAAGKT--FRHQIYPDYKANRPPMPEDLAVQIQPLHQLITALGFPLIMESG 110 Query: 101 NEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLS-PTLRIRDYFQKRWLDAPFIDKEFG 159 EADD+ TLA + +Q I S DK QLL+ + + D + + A + K F Sbjct: 111 VEADDVIGTLARQALAEDYQVIISSGDKDMTQLLTHADITLLDTMKNETITASDVAKRFK 170 Query: 160 VQ---PQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK 213 ++ Q+ D+ L G S +PGV +G K+A + L + SL+ I EN D + K Sbjct: 171 IEQLTAAQVIDFLALVGDKSDNIPGVEKVGAKTAEKWLATYGSLDAIIENADKIRGK 227 >UniRef50_B8H5J7 DNA polymerase I n=23 Tax=Alphaproteobacteria RepID=B8H5J7_CAUCN Length = 982 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 16/250 (6%) Query: 2 AVHLLIVD-ALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQ---PTHAVAV 48 AV L +VD + L R HA+ G P V+ + L +L+ Q PTH + Sbjct: 40 AVRLFLVDGSAYLFRAYHALPPLTRKSDGLPVGAVQGFCNMLWKLLRDMQGDTPTHLAVI 99 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 +D ++ +R+ YKA RPP PE+L + P +R A GVP G EADDL A Sbjct: 100 WDHSEKT--FRNALYDQYKAHRPPPPEDLIPQFPLVREATLAFGVPAIELPGYEADDLIA 157 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 A K G +A IVS+DK QL+ + + D + ++ + ++FGV P+++ D Sbjct: 158 AYACKARDIGGEAIIVSSDKDLMQLVGDGVSMYDPMKGVRIEREQVFEKFGVYPEKVVDV 217 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFL 227 L G S VPG GIG K+A QL+ E+ L+ + + + K R+ L + L Sbjct: 218 QALCGDSVDNVPGAPGIGIKTAAQLITEYGDLDTLLARAGEIKQPKRRETLINFADQIRL 277 Query: 228 CRDIARLQTD 237 R + +L D Sbjct: 278 SRALVKLDCD 287 >UniRef50_B2TNM6 DNA polymerase I n=7 Tax=Clostridiales RepID=B2TNM6_CLOBB Length = 871 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 61/211 (28%), Positives = 109/211 (51%), Gaps = 7/211 (3%) Query: 42 PTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGN 101 P + +A FD +S +RH+ +YKAGR MP EL ++ P ++ + G+ + G Sbjct: 50 PDNIIATFD--KKSPTFRHKEYSEYKAGRKKMPPELGEQFPIIKELLKYMGIKTFEIDGF 107 Query: 102 EADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKE 157 EADD+ T++ + + IV+ DK QL S ++ + + D E Sbjct: 108 EADDIIGTISKFGEENDMEVYIVTGDKDALQLASEKTKVVITKKGVTETAIYDYKAFMDE 167 Query: 158 FGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRK 216 F + P Q D GL G S +PGV G+G K+A +L+ E+ +LE + +++ ++ +K ++ Sbjct: 168 FEITPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYGTLEDVLKHIPEISGKKLKE 227 Query: 217 KLETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 LE + E A + +A + ++ +D NL + Sbjct: 228 NLENNMEQAIFSKKLATIMREVPLDINLSDI 258 >UniRef50_A8R8A1 DNA polymerase I n=2 Tax=unclassified Erysipelotrichaceae RepID=A8R8A1_9FIRM Length = 861 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 109/199 (54%), Gaps = 10/199 (5%) Query: 58 WRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQA 117 +RH +YK R + +EL + P +R + G+ + G EADD+ ++A + + Sbjct: 67 FRHTTYKEYKGTRKELDKELIVQFPIVREYLDAAGIKRYECEGIEADDIIGSIAKQHPEL 126 Query: 118 GHQATIVSTDKGYCQLLSPTLRIRDYFQKRW------LDAPFIDKEFGVQPQQLPDYWGL 171 I+S+D+ QL+ PT + Y K+ +D + + + + PQQ+ D L Sbjct: 127 AIH--ILSSDRDLLQLIDPTTDV--YLMKKGISEIEVMDEAQLMETYTLCPQQIIDLKAL 182 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G S+ +PGV GIG K+A +LL E+QS++ +YE++ + K ++KLE KE AFL + + Sbjct: 183 MGDSADNIPGVKGIGEKTAIKLLKEYQSVDNVYEHIAEIKGKLKEKLENGKESAFLSKFL 242 Query: 232 ARLQTDLHIDGNLQQLRLV 250 A ++TD I +++ + V Sbjct: 243 ATIKTDAKIPVDMKTCKRV 261 >UniRef50_C7GEY2 DNA polymerase I n=6 Tax=Clostridiales RepID=C7GEY2_9FIRM Length = 930 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 62/222 (27%), Positives = 115/222 (51%), Gaps = 9/222 (4%) Query: 35 QLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVP 94 +++ QP + FD + +RH+ +YK R PM +EL +++P ++ + GV Sbjct: 48 KILEEEQPDYLTVAFDVSEPT--FRHKMFAEYKGTRKPMAQELREQVPLMKEMLKAMGVT 105 Query: 95 CWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW------ 148 G EADDL T+A + Q G ++VS D+ QL + ++IR KR Sbjct: 106 TIEKGGYEADDLLGTIAKQSEQKGLTVSVVSGDRDLLQLATDHIKIRIPKTKRTGTEIED 165 Query: 149 LDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD 208 +A + +++ V P + D L G ++ +PGV GIG K+AT ++ ++ S+E Y ++D Sbjct: 166 YNAAEVQEKYQVTPIEFIDVKALMGDTADNIPGVPGIGEKTATAIIAQYGSVENAYAHVD 225 Query: 209 AVA-EKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 + + K L+ + ++A + + +A ++ ID +L +L Sbjct: 226 ELKPPRASKNLKEYYDLAQMSKTLATIEIHADIDYDLSGAKL 267 >UniRef50_A8SN89 DNA polymerase I n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=A8SN89_9FIRM Length = 888 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 10/214 (4%) Query: 42 PTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGN 101 PTH FD +++ +RH DYK R P E+ + L+ V Sbjct: 62 PTHIFVAFDKGSKT--FRHNEFADYKGTRDNAPNEITYQFGILKDLLSSMNVNYLELDEY 119 Query: 102 EADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR------WLDAPFID 155 EADD+ T+A + G + I + D+ Y QL+ + + Y K+ ++ I Sbjct: 120 EADDIIGTIAKLAQKEGFEVDIFTGDRDYLQLVDDNILV--YLTKKGISEIKLMNTESIL 177 Query: 156 KEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR 215 +E+ + P+QL D L G SS +PGV G+G K+A +L+ E+ +LE +YEN+D + K + Sbjct: 178 EEYDLSPKQLIDVKALQGDSSDNIPGVKGVGEKTALKLIQEYGNLENLYENIDNLKGKLK 237 Query: 216 KKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 + L K+ A+L R + + + I+ N++ + Sbjct: 238 ENLVNEKDKAYLSRYLGEIFLRVPIERNIEDFEI 271 >UniRef50_Q8D2U6 PolA protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D2U6_WIGBR Length = 289 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 10/213 (4%) Query: 43 THAVA-VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGN 101 T+ VA VFD + +S R++ +YK+ R MPE+L ++P ++ G + G Sbjct: 61 TNCVAIVFDSHHNTS--RNKIYKNYKSNRKKMPEDLKHQIPIIKNILSFMGFSIFCIDGI 118 Query: 102 EADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQ 161 E+DD+ T+++K+ Q G + I + DK QL+S + I + + D + ++ + Sbjct: 119 ESDDIIGTMSIKLEQQGKKVFIFTNDKDMMQLVSSNVNIININNYKIYDVIEVYLKYKIF 178 Query: 162 PQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENL-------DAVAEKW 214 P + DY L G S +PG+ IG K+A +LL +F SL IY N+ D ++K Sbjct: 179 PCSIADYLALVGDCSDNIPGIPRIGEKTAVKLLNKFPSLLDIYNNIRKVDKLTDIKSKKV 238 Query: 215 RKKLETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 L+ +K AFL + ++ T++ I+ + + + Sbjct: 239 IYSLKKNKRKAFLYYKLTKINTNIKINFSFKDI 271 >UniRef50_B0MR22 DNA polymerase I n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR22_9FIRM Length = 829 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 4/193 (2%) Query: 58 WRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQA 117 +RH+ YKA R MPE+L ++P ++ G+ G EADD+ T++ Sbjct: 63 FRHKMYDGYKANRKGMPEDLAQQLPYMKKIITAMGITIIEKEGFEADDIIGTVSAACADK 122 Query: 118 GHQATIVSTDKGYCQLLSP--TLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 T+ + D+ QL++ T+R+ + I +E+GV P+Q+ + L G S Sbjct: 123 KIPCTVSTGDRDSFQLVNDYVTVRLAKTKGDIYYTPDVIMEEYGVTPKQMIEVKALMGDS 182 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDA--VAEKWRKKLETHKEMAFLCRDIAR 233 S +PGV GIG K+A L+ EF S++G+YEN+ + + + R KLE KE ++ R +A Sbjct: 183 SDNIPGVPGIGEKTALSLIKEFASVDGVYENIGSTLITKGVRTKLENGKESCYMSRQLAE 242 Query: 234 LQTDLHIDGNLQQ 246 + ID L Sbjct: 243 ICLTAPIDTELSH 255 >UniRef50_A5TW64 DNA-directed DNA polymerase I n=10 Tax=Fusobacterium RepID=A5TW64_FUSNP Length = 914 Score = 104 bits (260), Expect = 2e-21, Method: Composition-based stats. Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 16/225 (7%) Query: 31 HALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQ 90 + L +I +P + A FD + RSS R + DYK+ R PE+L ++P + + Sbjct: 38 NTLLSIINEFKPDYMAAAFDVK-RSSLKRTEIYSDYKSNRQSAPEDLITQIPRIEEVLDA 96 Query: 91 RGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLD 150 + + G EADD+ +LA K+ + + IV+ DK QL+ + + K Sbjct: 97 FNINRYKIEGYEADDVLGSLAKKLAKQDIEVIIVTGDKDLSQLVEKNITVA-LLGKGAEG 155 Query: 151 APF--------IDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEG 202 F + GV P+++PD +GL G S +PGV IG K A + ++ SLE Sbjct: 156 EKFGTLKNSDDVVNYLGVVPEKIPDLFGLIGDKSDGIPGVTKIGEKKALAIFSQYDSLEK 215 Query: 203 IYEN------LDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHID 241 IYEN +D + K L K++AF+ R++A++ T+L ID Sbjct: 216 IYENIDNLKSIDGIGPSLIKNLINEKDIAFMSRELAKIFTNLDID 260 >UniRef50_Q30R59 DNA polymerase A n=6 Tax=Epsilonproteobacteria RepID=Q30R59_SULDN Length = 902 Score = 104 bits (260), Expect = 2e-21, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 107/204 (52%), Gaps = 2/204 (0%) Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 VF + + +R + P+YKA R P P+EL ++P ++ G G EADD+ Sbjct: 56 VFAIDTKGDSFRKEIDPNYKANRQPPPQELSMQLPIAIEWIDKMGYKTLGFDGYEADDVI 115 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSP-TLRIRDYFQKRWLDAPFIDKEFGVQPQQLP 166 AT+ + + +VS DK QL+ + + D +K+ +D K++G+ P+Q Sbjct: 116 ATVVRFAKEKSYNVRVVSHDKDLFQLIDDGRVVLVDAIKKQVMDEDECFKKYGISPKQFI 175 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMA 225 DY + G S+ +PGV GIG A +LL+E+++L+ IY N++ + +KKL KE A Sbjct: 176 DYQSILGDSADNIPGVKGIGKVGAEKLLIEYETLDNIYANIENIKPLGIQKKLLEFKEQA 235 Query: 226 FLCRDIARLQTDLHIDGNLQQLRL 249 ++ + + L + + ++ ++ Sbjct: 236 YMSKKLVTLSCSVFESFDFEEFKM 259 >UniRef50_C9LLQ0 DNA polymerase I n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLQ0_9FIRM Length = 858 Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 124/257 (48%), Gaps = 25/257 (9%) Query: 15 RRIHAVQGSPCVETCQHALDQLIMHSQPTHAV-------------------AVFDDENRS 55 +++ V GS + L L H PT+AV AV D+N+ Sbjct: 3 KKLVVVDGSSLLYRAFFGLPPLSYHGIPTNAVMGFLNMLYDIYKNFDPEYMAVSFDKNKQ 62 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 + +R + +YKA R P P EL + +R A G + G E DD+ TLA + Sbjct: 63 T-FRSEVYKEYKATRKPAPPELVPQFALIREALRTLGAAVYEVDGYEGDDILGTLAARYE 121 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + IV+ D+ QL + + R Q + + +++G+ P+Q+ D L Sbjct: 122 KE-LPVFIVTGDRDALQLATKDTTVYITQRGVSQMAAMTPEAVVEKYGITPRQVIDMKAL 180 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G +S +PGV G+G K+A +LL ++Q+L+ +Y ++ + K+L +KE+A+L + Sbjct: 181 MGDTSDNIPGVPGVGEKTAAKLLSQYQTLDNLYGHVGEIKGAVGKRLAANKELAYLSYRL 240 Query: 232 ARLQTDLHIDGNLQQLR 248 A ++TD+ + L++++ Sbjct: 241 ATIKTDVPFEAALEEMK 257 >UniRef50_B2A646 DNA polymerase I n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A646_NATTJ Length = 930 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 106/216 (49%), Gaps = 6/216 (2%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L +L+ P + VFD + ++ +RH + P+YK R P+E+ +MP L+ E Sbjct: 49 LLKLVQDESPNYLAVVFDTKAKT--FRHHKFPEYKGHRDKAPDEMRPQMPMLKELLEAMN 106 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRW 148 + + G EADDL Q + +V+ DK QLL I + Q Sbjct: 107 INYFEKDGYEADDLIGAFTKIAKQEDKETMVVTGDKDLLQLLDDKTTILLTKKGITQMES 166 Query: 149 LDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD 208 D + +EFGV +L D L G S VPGV G+G K+A +LL + LE +Y++LD Sbjct: 167 YDGEKVKEEFGVNVDKLIDLKALTGDKSDNVPGVPGVGKKTALKLLNNYGDLEKLYKSLD 226 Query: 209 AVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNL 244 V K + KL +K+ AFL +++ + + + NL Sbjct: 227 GVGGKLQSKLADNKDKAFLSKELVTIDCEESLIENL 262 >UniRef50_B8LLQ0 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LLQ0_PICSI Length = 400 Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 107/220 (48%), Gaps = 26/220 (11%) Query: 42 PTHAVAVFDDENRSSGW-----------------RHQRLPDYKAGRPPMPEELHDEMPAL 84 P+H VFD G+ RH P YK+ R P P+ + + L Sbjct: 167 PSHIAVVFDHRGFEFGYNPPNLCQEFCGSTGPTFRHTLYPAYKSNRMPTPDTIVQALQYL 226 Query: 85 RAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYF 144 +AA + V G EADD+ TLAV AG + +VS DK + Q+L P+LR+ Sbjct: 227 KAALQAMSV---KVPGVEADDVIGTLAVNGVAAGLKVRVVSPDKDFFQILCPSLRLLRIS 283 Query: 145 QKRWLDAPFIDKEFG-----VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQS 199 + A F ++F ++P Q+ D LAG ++ +PGV GIG +A +L+++F S Sbjct: 284 SRGSRIASFGVEQFAEKYGDLKPSQIVDVMALAGDNADFIPGVHGIGDMNALKLIIKFGS 343 Query: 200 LEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIARLQTDL 238 LE + NLD V + RK L A L +++A L+ +L Sbjct: 344 LENLLANLDRVPDGAIRKALLFDDGQALLSKELATLRCNL 383 >UniRef50_B6YQQ9 DNA polymerase I n=13 Tax=Bacteroidales RepID=B6YQQ9_AZOPC Length = 928 Score = 103 bits (258), Expect = 4e-21, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 12/224 (5%) Query: 31 HALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQ 90 + LD ++ PTH FD + +RHQ YKA R PE + +P ++ Sbjct: 40 NTLDNILRRENPTHIGVAFDPIEPT--FRHQVFKQYKAQREETPETIRLSIPIIKDIVSA 97 Query: 91 RGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI------RDYF 144 +P SG EADD+ T+A K T ++ +++ DK Y QL+ + I +D F Sbjct: 98 YHIPILEVSGYEADDVIGTVAKK-TSRDYEIFMMTPDKDYGQLVDEHIFIYKPRYRKDGF 156 Query: 145 QKRWLDAPFIDKEFG-VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGI 203 + L I +++G + P Q+ D+ GL G SS +PG GIG +A +L+ F S+E + Sbjct: 157 E--ILGVKEIKEKYGFISPIQMIDFLGLMGDSSDNIPGCPGIGEITAKKLIARFGSIENL 214 Query: 204 YENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 +N+ + + K+E +KE + +A ++TD+ I+ N +L Sbjct: 215 LKNVHFLNGILKTKIERNKETILFSKFLATIKTDVPINFNPNEL 258 >UniRef50_Q7VRJ4 DNA polymerase I n=3 Tax=Enterobacteriaceae RepID=Q7VRJ4_BLOFL Length = 943 Score = 103 bits (258), Expect = 4e-21, Method: Composition-based stats. Identities = 63/213 (29%), Positives = 108/213 (50%), Gaps = 9/213 (4%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 + LI QP+H +FD ++ +R YK+ R +P++L ++ + G Sbjct: 48 IKSLITRYQPSHMAVIFDVSGKT--FRDDLFKQYKSNRIKIPDDLSIQIIPTHKIIKAMG 105 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAP 152 + + EADD+ ATLA Q I + DK Q++S + + + L+ Sbjct: 106 ISVLNIPNVEADDVIATLATFYAQLNKTVLISTGDKDMAQIVSSNIILINTMSNIMLNPT 165 Query: 153 FIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE 212 ++K+FGV P + DY L G + +PGV GIG K+A +L + +L +Y+NL+ + + Sbjct: 166 EVEKKFGVPPTLIADYLALVGDRADNIPGVPGIGKKTAQIVLNQIGNLNILYQNLNNILQ 225 Query: 213 ---KWRKK----LETHKEMAFLCRDIARLQTDL 238 + RKK L +KE+AFLC +A ++ D+ Sbjct: 226 LNIRGRKKIYQALLINKELAFLCYKLATIKIDV 258 >UniRef50_B0KVB0 Putative 5'-3' exonuclease n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVB0_9BACT Length = 306 Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 17/259 (6%) Query: 4 HLLIVDALNLIRR-IHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 LLI+D N + R HA+ Q + + L ++ +P + VA D Sbjct: 3 KLLIIDTFNFLHRAYHALPKTFRGPDGQPTNAIYGFTSMLINVLNQIKPDYVVAALD--G 60 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +R YKA R PM E+L ++P + + + G EADD+ T+A K Sbjct: 61 KEPTFRVGEFTAYKAQRKPMEEDLQTQIPKVFEVLDAFNIKKIVVEGYEADDVIGTVATK 120 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK---RWLDAPFIDKEFGVQPQQLPDYWG 170 + + I+S D+ QL I +K WL +D + G + ++ DY G Sbjct: 121 L-KGKVDILIISNDRDLWQLAGNGNIIMVPGKKGEFEWLGEKEVDAKLGFEADKIADYKG 179 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLCR 229 L G S +PGV G+G +AT+LL ++ SLE IY N++ + E +KKL E A + + Sbjct: 180 LRGDPSDNIPGVFGVGEVTATKLLQKYGSLEEIYRNIEKIEPESLKKKLLESYEQALMSK 239 Query: 230 DIARLQTDLHIDGNLQQLR 248 +A++ D+ NL++ + Sbjct: 240 RLAQIVLDVPFQINLEECK 258 >UniRef50_P52027 DNA polymerase I n=4 Tax=Deinococci RepID=DPO1_DEIRA Length = 956 Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 10/218 (4%) Query: 37 IMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCW 96 + + + VFD ++ +RH++ YK+GR PE+L ++ +RA + G P Sbjct: 89 LARQKSNQVIVVFDPPVKT--FRHEQYEGYKSGRAQTPEDLPGQINRIRALVDALGFPRL 146 Query: 97 STSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI--RDYFQKRWLDAPFI 154 G EADD+ A+L G++ IV++D+ QLL +++ D+ + + Sbjct: 147 EEPGYEADDVIASLTRMAEGKGYEVRIVTSDRDAYQLLDEHVKVIANDF---SLIGPAQV 203 Query: 155 DKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK- 213 ++++GV +Q DY L G +S +PG GIGPK+A +LL E+ +LE +YE A K Sbjct: 204 EEKYGVTVRQWVDYRALTGDASDNIPGAKGIGPKTAAKLLQEYGTLEKVYEAAHAGTLKP 263 Query: 214 --WRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 RKKL +E D++ + TDL +D RL Sbjct: 264 DGTRKKLLDSEENVKFSHDLSCMVTDLPLDIEFGVRRL 301 >UniRef50_A7NJD5 DNA polymerase I n=2 Tax=Roseiflexus RepID=A7NJD5_ROSCS Length = 972 Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 75/260 (28%), Positives = 119/260 (45%), Gaps = 24/260 (9%) Query: 5 LLIVDALNL-IRRIHAV--------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDEN 53 LL++D L R HA+ G P V A+ I QP +A FD Sbjct: 8 LLLIDGHALAYRAFHALAEAGLRSSTGEPTYAVYGFTSAMLNAIEEYQPEYAAVAFD--- 64 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +R +YKA R P E ++ ++ +P ++ G EADD+ TLA + Sbjct: 65 VGKTFRDDLYAEYKANRAETPAEFEQQLERIKQVLAAFDIPIYTAEGYEADDVIGTLARQ 124 Query: 114 VTQAGHQATIVSTDKGYCQLL---------SPTLRIRDYFQKRWLDAPFIDKEFGVQPQQ 164 T+ G I++ D QL+ +P LR R+ A ++ G++P Q Sbjct: 125 ATERGVDVLILTGDTDTLQLVDDHVTVLLNNPYLR-GPKNTTRYGVAEVTERYKGLRPHQ 183 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 L D GL G S +PGV GIG A LL +F ++E +Y++LD ++++K LE +++ Sbjct: 184 LADLRGLKGDPSDNIPGVKGIGEAGAIALLNQFGTIENLYDHLDEAPKRYQKHLEGQRDI 243 Query: 225 AFLCRDIARLQTDLHIDGNL 244 A + +A + D + NL Sbjct: 244 ALFSKKLATIVCDAPVTLNL 263 >UniRef50_A8MQG8 Uncharacterized protein At3g52050.3 n=15 Tax=Magnoliophyta RepID=A8MQG8_ARATH Length = 448 Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 79/245 (32%), Positives = 123/245 (50%), Gaps = 24/245 (9%) Query: 18 HAVQGSPCVETCQHALDQLI--MHSQPTHAVAVFDDE--------NRSSGWR-------- 59 HA + V T +L LI + P+H VFD + N S+G+R Sbjct: 146 HADGNADWVLTIFSSLSLLIDVLKFLPSHVAVVFDHDGVPYGTTSNSSTGYRSAKGMNFR 205 Query: 60 HQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGH 119 H P YK+ RPP P+ + + L+A+ + + G EADD+ TLA++ AG Sbjct: 206 HTLYPAYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEVPGVEADDVIGTLAMRSISAGF 265 Query: 120 QATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPF----IDKEFG-VQPQQLPDYWGLAGI 174 + +VS DK + Q+LSP+LR+ + A F K+FG ++P Q D LAG Sbjct: 266 KVRVVSPDKDFFQILSPSLRLLRLTPRGSEMASFGMEDFAKKFGNLEPAQFVDIIALAGD 325 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIAR 233 S +PGV GIG A +L+ F +LE + +++D + E K ++ L + A L + +A Sbjct: 326 KSDNIPGVDGIGNVHAVELISRFGTLENLLQSVDEIKEGKIKESLIASADQAILSKKLAL 385 Query: 234 LQTDL 238 L++DL Sbjct: 386 LRSDL 390 >UniRef50_C4LIB4 DNA polymerase I n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LIB4_CORK4 Length = 925 Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 6/209 (2%) Query: 36 LIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPC 95 L+ +PTH+ A FD + +R ++ DYKA RP P E ++ +R A E G+ Sbjct: 56 LLEQEKPTHSAAAFDLAGPT--FRSEKFADYKAQRPETPPEFKGQIELIRQALETFGITT 113 Query: 96 WSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPF-- 153 EADD+ ATLA + + G I + D+ QL++ + + + A F Sbjct: 114 VDYKRYEADDVIATLATQGHEQGFDTYICTGDRDSLQLVTDDVTVLYTLRGVSNLARFTP 173 Query: 154 --IDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA 211 +++++GV P Q PD L G +S +PGV G+GPK+A + + ++ SL + +N+D + Sbjct: 174 EAVEEKYGVTPTQYPDLAALRGDTSDNMPGVPGVGPKTAQKWINKYGSLSNLIDNIDDIG 233 Query: 212 EKWRKKLETHKEMAFLCRDIARLQTDLHI 240 K L + R++ + DL I Sbjct: 234 GKVGDALRRDIDTVIQARELTEMVRDLPI 262 >UniRef50_C8PHS8 DNA polymerase I n=2 Tax=Campylobacter RepID=C8PHS8_9PROT Length = 938 Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 2/194 (1%) Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 +F +++ +R P+YK R P L ++P E+ G+ G EADDL Sbjct: 54 IFALDSKGKTFRSDIDPNYKTNRQAPPPALLQQLPVCIEMIEKMGLYSLGREGYEADDLI 113 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPD 167 A++ VK A H+ IV++DK QL+ ++I + +K + +GV P+Q+ D Sbjct: 114 ASV-VKKYGATHKINIVTSDKDLYQLIGENVKIYSHGKKMLYGREECLQRYGVYPEQIVD 172 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAF 226 + + G S+ +PGV GIG K A +LL E+ SL+ IY NLD + + K R+ L K+ A+ Sbjct: 173 FLAICGDSADNIPGVRGIGDKGAKKLLDEWGSLDEIYSNLDRLPQNKQREYLIEGKQSAY 232 Query: 227 LCRDIARLQTDLHI 240 + + +A L +L I Sbjct: 233 ISKRLATLYDELEI 246 >UniRef50_B1VB35 DNA polymerase I n=1 Tax=Candidatus Phytoplasma australiense RepID=B1VB35_PHYAS Length = 676 Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 126/262 (48%), Gaps = 23/262 (8%) Query: 4 HLLIVDALNLIRRIHAVQGSPCVETCQHA-------------LDQLIMHSQPTHAVAVFD 50 HL++VD +L+ R + + + Q+ + + I+ + + FD Sbjct: 3 HLVLVDGNSLVFRAYHATANNGKKLLQNKKGVYTNALLSFIKMFEKILEQTKNYILVAFD 62 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + + RHQ +YK GRP P+EL D++P ++ +GV + EADD+ TL Sbjct: 63 THHPTK--RHQMYDNYKKGRPETPQELIDQIPLIKKYLTLKGVKHHFQAEFEADDIIGTL 120 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL------DAPFIDKEFGVQPQQ 164 A + + +I S+D+ QL+ + Y K+ L + + +E+G++ Q Sbjct: 121 AKMASNKNIKVSIYSSDQDLLQLVDTNTSV--YLIKKGLKLIKHYNPKTLLEEYGLKEYQ 178 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + DY L G SS + GVAGIGPK+A LL + +L+ + +LDA+ ++K+ E Sbjct: 179 MIDYKALMGDSSDNIKGVAGIGPKTAKNLLQTYDNLDNLLSHLDAIKPSLKEKINNCMED 238 Query: 225 AFLCRDIARLQTDLHIDGNLQQ 246 L + + + T + + L+Q Sbjct: 239 LKLSKILTTIDTKVPLPFELEQ 260 >UniRef50_Q98PK2 5'-3' exonuclease n=1 Tax=Mycoplasma pulmonis RepID=EX53_MYCPU Length = 297 Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 13/244 (5%) Query: 5 LLIVDALNLIRRIHAVQGS------PCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGW 58 L++D L+ R + V + + ++I + P + FD+E W Sbjct: 11 FLLIDGNYLVHRSYYVSFKFKNNFRSTIYLFFQTIIKIIKNLNPENIFIAFDEE--GGTW 68 Query: 59 RHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAG 118 RH +YK+ R M +E + A+R + + G+EADD+ AT+ K Sbjct: 69 RHDLCKEYKSQRSKMEDEFWNIFKAIREILDSINLNSGGFRGHEADDVIATITSKFKDE- 127 Query: 119 HQATIVSTDKGYCQLLSPTLRI-RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSS 177 +Q I S DK QL+ + I D K + + F ++P Q+ D+ +AG SS Sbjct: 128 NQIYIFSRDKDLLQLIDKNVYITHDNELKNLISIENFYQNFQLEPDQIVDFKAIAGDSSD 187 Query: 178 KVPGVAGIGPKSATQLLVEFQSLEGIYENLDA---VAEKWRKKLETHKEMAFLCRDIARL 234 + G+AGIG K A LL F+SLE I+++L++ +++ ++K+ KE A + I L Sbjct: 188 NLKGIAGIGEKGAKNLLNNFKSLEKIFDSLESTNLISKAQKQKIRDGKEQALFLKKIVTL 247 Query: 235 QTDL 238 ++ Sbjct: 248 NKEV 251 >UniRef50_B1WPN5 DNA polymerase I n=13 Tax=Bacteria RepID=B1WPN5_CYAA5 Length = 970 Score = 102 bits (255), Expect = 9e-21, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 14/231 (6%) Query: 31 HALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQ 90 ++L Q I P + FD ++ +RH+ +YKA R PE+ ++ L+ E Sbjct: 50 NSLIQAIKLENPQYIAIAFD--SKEPTFRHEADVNYKADRKETPEDFIPDILNLQRLLEA 107 Query: 91 RGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR--- 147 + + G EADD+ T+A K +Q G++ IVS D+ QL++ + + +R Sbjct: 108 LNITIITAPGYEADDVLGTVATKGSQEGYRVKIVSGDRDLFQLVNDDNHLSVLYLERNAV 167 Query: 148 ---------WLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQ 198 + + ++ G++P Q+ DY L G S +PGV GIG K+A +LL E+ Sbjct: 168 KSSSGEGYTEFNVEAVTEKMGIKPTQVIDYKALCGDKSDNIPGVRGIGEKTAVKLLSEYG 227 Query: 199 SLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 +LE +Y N++ + +KKL+ K+ A + +A + TD ++ +++ L Sbjct: 228 TLEAVYNNIEEIKGANQKKLKEGKKEAEHSQYLAEIVTDAPLEFQIERCEL 278 >UniRef50_C3WHF0 DNA polymerase I n=3 Tax=Fusobacterium RepID=C3WHF0_9FUSO Length = 916 Score = 102 bits (255), Expect = 9e-21, Method: Composition-based stats. Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 18/233 (7%) Query: 31 HALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQ 90 + L +I P + A FD + RSS R + DYK+ R PE+L ++P + + Sbjct: 38 NTLLSIIKEFNPDYMAAAFDVK-RSSLKRTEIFGDYKSNRQSTPEDLVAQIPRIEEVLDA 96 Query: 91 RGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI---------R 141 + + EADD+ ++A K+ + + IV+ DK QL+ + I Sbjct: 97 FNINRYRIESYEADDVLGSIAKKIAKDDLEVIIVTGDKDLSQLVEKNITIALLGKGTEGE 156 Query: 142 DYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLE 201 + R A + GV P+++PD +GL G S +PGV IG K A + ++ SLE Sbjct: 157 KFGMLR--TAEDVVNYLGVVPEKIPDLFGLIGDKSDGIPGVTKIGEKKALAIFSKYDSLE 214 Query: 202 GIYENLD------AVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 IYEN+D + K L K++AFL R++A++ T+L I+ + L+ Sbjct: 215 KIYENIDDLKNIEGIGPSLIKNLTNEKDIAFLSRELAKIFTNLDINLEEENLK 267 >UniRef50_D0RQG2 DNA polymerase I n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQG2_9RICK Length = 925 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 3/209 (1%) Query: 42 PTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGN 101 PTH +FD ++ +R+ DYK R PE+L + +R A + +P Sbjct: 61 PTHLAVIFDSARKN--FRNDIYKDYKGNRSDAPEDLIPQFDYIRKAVKAFNLPSIEMLNY 118 Query: 102 EADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQ 161 EADDL AT K + + TIVS+DK QL+ + D + R + + ++FGV Sbjct: 119 EADDLIATYKEKAKKKKIKITIVSSDKDLMQLVDKETFMLDTMKDRHIGIEEVKEKFGVP 178 Query: 162 PQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLET 220 P+++ D LAG S +PGV GIG K+A +L+ +F SL+ + + D + + K R+ L Sbjct: 179 PEKVIDVQSLAGDSVDNIPGVPGIGVKTAAELINQFGSLDELLKKADTIKQPKRRQTLLD 238 Query: 221 HKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 +K+ A + R++ L+ D+ I ++ L Sbjct: 239 NKKNALISRELVTLKCDVPIKEEIEDFIL 267 >UniRef50_Q9ZJE9 DNA polymerase I n=17 Tax=Helicobacter RepID=DPO1_HELPJ Length = 897 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 104/192 (54%), Gaps = 9/192 (4%) Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 VF E+++ R ++L +YK R P+E+ ++P ++ G C G EADD+ Sbjct: 65 VFALESQTKTKRAEKLGEYKQNRKDAPKEMLLQIPIALEWLQKMGFTCVEVGGFEADDVI 124 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPD 167 A+LA T + ++ I S DK + QLLS + + D + +L ++K +G+ P Q D Sbjct: 125 ASLA---TLSPYKTRIYSKDKDFNQLLSDKIALFDG-KTEFLAKDCVEK-YGILPSQFTD 179 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD----AVAEKWRKKLETHKE 223 Y G+ G SS GV GIG K+A +LL SLE IYENLD ++ K + L K Sbjct: 180 YQGIVGDSSDNYKGVKGIGSKNAKELLQRLGSLEKIYENLDLAKNLLSPKMYQALIQDKG 239 Query: 224 MAFLCRDIARLQ 235 AFL +++A L+ Sbjct: 240 SAFLSKELATLE 251 >UniRef50_Q02DA6 DNA polymerase I n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02DA6_SOLUE Length = 865 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 18/260 (6%) Query: 5 LLIVDALNLIRRIH---AVQGSPCVETC-----------QHALDQLIMHSQPTHAVAVFD 50 L ++D I R + A G+P + T + L +L P + A+F Sbjct: 10 LFLIDTFGFIFRAYHARARTGAPPMRTSTGFSTEAVYIFNNMLRKLSKQHDPPYVAAIF- 68 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 E+ + R Q +YKA R P +L D++P +R E +P G EADD+ T+ Sbjct: 69 -ESGEATHRVQEFAEYKANRTETPPDLLDQIPFVRRVLEAMRIPILEYPGFEADDVIGTI 127 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEF-GVQPQQLPDYW 169 + G IVS+DK QL++ + + + + L P K F GV P Q+ D Sbjct: 128 TRRAEAEGLDVVIVSSDKDMLQLVTEHVSMLNPAKDDKLYNPEEVKTFMGVPPVQVADLL 187 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHKEMAFLC 228 L G S +PG GIG K A Q+L +F S+E E V K +R+ L+ + + + Sbjct: 188 ALMGDSVDNIPGAPGIGDKGAKQILEKFGSIEAALERAAEVERKVYRESLQNNVDRIRMS 247 Query: 229 RDIARLQTDLHIDGNLQQLR 248 + +A + TD+ I+ L ++ Sbjct: 248 KRLATISTDVPIEFTLDAVK 267 >UniRef50_B3PMZ8 5'-3' exonuclease, exo domain of DNA polymerase I n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PMZ8_MYCA5 Length = 293 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 13/216 (6%) Query: 31 HALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQ 90 + L LI + TH FD + ++ +RH+ YKA R P + + ++ ++ + Sbjct: 44 NTLLTLIKMQKVTHVFVAFDSKIKT--FRHELFSGYKATRQKAPSDFYVQLNFIQQLLDA 101 Query: 91 RGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRD------YF 144 + + G EADD+ A + ++ + I S D+ QL++P + I YF Sbjct: 102 LNITNFYKDGFEADDIIAKVVSIFSE--DEILIHSADQDLNQLINPNVAIIKKNNKGVYF 159 Query: 145 QKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIY 204 + L+A + + P Q+ DY L G SS GV GIGPKSA LL E+ +LE I+ Sbjct: 160 E---LNANNFGEYYDFLPSQVIDYKALVGDSSDNFKGVPGIGPKSAAGLLHEYGTLENIF 216 Query: 205 ENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHI 240 N++++ + K+E +KE A + +A L+TD I Sbjct: 217 ANIESIKPALKAKIEANKEEALRDKYLATLRTDFEI 252 >UniRef50_B2KCD2 DNA polymerase I n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCD2_ELUMP Length = 862 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 124/259 (47%), Gaps = 22/259 (8%) Query: 5 LLIVDALNLI-RRIHAVQGSPCVETCQHA-----------LDQLIMHSQPTHAVAVFDDE 52 + I DA N + R HA+ P + T Q L +L+ +P H VAV D Sbjct: 8 IYIADAHNFLHRNYHAL---PKLSTSQGLEVGALYGFVRWLVKLVEEKKP-HYVAVCFDS 63 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 S R + DYKA R P+ E L ++ R G+ ++ G EADD+ +A Sbjct: 64 RGGSTKRKKMFSDYKAHRKPVDEALLTQLQLAREVVSGMGLKVFAVQGIEADDIIGFIAK 123 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRI-RDYFQKRWLDAP-FIDKEFGVQPQQLPDYWG 170 K G A + ++DK QLL+ +++ K L P ++ ++F + + L DY Sbjct: 124 KSVAEGADAVLATSDKDALQLLNEHIKLWPAGAAKESLKGPDYVKEKFNIAQKYLTDYLA 183 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRK----KLETHKEMAF 226 + G SS VPGVAG+GPK+A +L+ F LE I + A K +K K+ ++ +A Sbjct: 184 IVGDSSDNVPGVAGLGPKTAAELINNFGYLEDIIKEAKAGNPKIKKGAAQKIIDNEAVAI 243 Query: 227 LCRDIARLQTDLHIDGNLQ 245 L + + L ++ +D L+ Sbjct: 244 LSKQLVTLDENIPMDFTLE 262 >UniRef50_A7HJZ2 DNA polymerase I n=11 Tax=Bacteria RepID=A7HJZ2_FERNB Length = 898 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%) Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 D S +R + DYKA RP PE L ++ E G+ G EADD+ ATL Sbjct: 62 DVKGGSTYRKELYADYKAHRPETPEPLLKQISLADELIEGFGIKLIKVPGYEADDVIATL 121 Query: 111 AVKVTQAGH-----QATIVSTDKGYCQLLSPTL---RIRDYFQ--KRWLDAPFIDKEFGV 160 A K + + I+++DK QL++ + R+ K++ + I+K +G+ Sbjct: 122 AKKFEKEKQKYNISEINIITSDKDMLQLVNENIFVWRVEKGVTDLKKYTNNEIIEK-YGI 180 Query: 161 QPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLET 220 +Q+ DY L G S +PGV+GIG K+A ++L EF S+E +N+ + EK R +E Sbjct: 181 TSEQIKDYLALVGDVSDNIPGVSGIGEKTAAKILNEFGSVENALKNISKLPEKIRNAIEN 240 Query: 221 HKEMAFLCRDIARLQTDLHIDGNLQQL 247 + E L R + L T++ I ++++L Sbjct: 241 NIEDFELSRKLVELNTNVEIKIDIEEL 267 >UniRef50_B3DZC7 5'-3' exonuclease n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZC7_METI4 Length = 296 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 114/224 (50%), Gaps = 10/224 (4%) Query: 32 ALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLP---DYKAGRPPMPEELHDEMPALRAAF 88 L +L+ +P VFD G +RL DYKA RP +P L ++P ++ Sbjct: 39 VLRRLLSDLKPELGAVVFD-----GGLPAERLALRADYKANRPEIPSALKSQLPWIKKLV 93 Query: 89 EQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW 148 + G+ G EADD+ A+ K + G + ++DK L+ +R+ +KR+ Sbjct: 94 KALGLCPIEVEGQEADDVIASYTKKAVEKGIDVVLATSDKDLMSLVGEHVRVYTVEKKRF 153 Query: 149 --LDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYEN 206 L I++++ V+P Q+PD L G S +PGV GIG K+AT+ ++++ SL + + Sbjct: 154 KLLGQREIEEKWSVKPSQIPDVLALIGDSVDNIPGVEGIGKKTATKWIIQYGSLFSLLQA 213 Query: 207 LDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 D ++ K LE +KE + + L+ ++ + +++LR+V Sbjct: 214 RDIPDRRFAKLLEENKERIMINWKMLELKDNIELPLPIEELRIV 257 >UniRef50_Q21LK9 5'-3' exonuclease n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21LK9_SACD2 Length = 289 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 11/224 (4%) Query: 21 QGSPCVETCQHA--LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELH 78 +G+P +A L +++ P++ A FD E+ ++ +R+ PDYK R + L Sbjct: 29 EGNPTAGVYGYANWLKRMLADLNPSYIAACFD-ESLTTCFRNDIYPDYKCSRVLPDDLLA 87 Query: 79 DEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLS-PT 137 ++ A R E G+PC++++ +EADDL TLAV+ G + ++S DK QL+ T Sbjct: 88 FQLAASRQVTEALGIPCYASATHEADDLLGTLAVRAASKGLEVCVLSRDKDLSQLIGCET 147 Query: 138 LRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEF 197 ++ DY + I ++ GV P+Q+ D L G +PGV G+G K+A QLL Sbjct: 148 AQLWDYPDGIPMKRAQIHEKLGVWPEQVVDLLALVGDVGDDIPGVPGVGVKTAAQLLTHM 207 Query: 198 QSLEGIYENLDAV-------AEKWRKKLETHKEMAFLCRDIARL 234 S + N+ AV A+ KLE +++ + +AR+ Sbjct: 208 PSWAEVRSNIPAVANLPIRGAKSLAAKLEAYQDQVDMAYQLARI 251 >UniRef50_C5BR48 5'-3' exonuclease n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BR48_TERTT Length = 301 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 112/225 (49%), Gaps = 11/225 (4%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L + + +P + FD E+ +S +R++ P YKA R E L ++ A + G Sbjct: 47 LLRFLKAVRPKYIACCFD-ESLTSCFRNELYPGYKASRALPDESLAFQLAACKGLSAAYG 105 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLR--IRDYFQKRWLD 150 + +++ EADDL ATLA K + G +VS DK Q++ T R + D+ + LD Sbjct: 106 LATYASPRFEADDLIATLAAKSRKRGLSVCVVSRDKDLSQIIR-TARDTLWDFPDREPLD 164 Query: 151 APFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV 210 + I ++G+ P+Q+ D+ L G S +PGVAGIG K+A LL EF S I N + V Sbjct: 165 SDAIFAKYGIYPEQMADFLALVGDPSDDIPGVAGIGGKTAAALLAEFGSWREIRRNYNRV 224 Query: 211 AE-------KWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 A+ K KL + L R +AR+ +D + + R Sbjct: 225 AKCAIRGAAKLGDKLAAAEAQIELSRQLARVASDAPLGARFRVTR 269 >UniRef50_B7RUU1 5'-3' exonuclease, N-terminal resolvase-like domain family n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RUU1_9GAMM Length = 299 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 102/208 (49%), Gaps = 8/208 (3%) Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 DE+ S +R++ P YKA R E L ++ A R + G+P + EADD ATL Sbjct: 61 DESLGSCFRNELYPGYKASRTLPDEALAFQLRACRTLTDLCGIPSYGGERYEADDYLATL 120 Query: 111 AVKVTQAGHQATIVSTDKGYCQLL-SPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 A T+V+ DK QLL + + D+ + LD FGV P Q DY Sbjct: 121 ARLARTKKLSTTVVTRDKDLGQLLVENSDQWWDFASDQTLDRAAFQARFGVPPDQFADYL 180 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHK 222 GL G S +PGV G+G K+A ++ L+ I N+D+V A + + +L+ H Sbjct: 181 GLVGDSVDDIPGVPGVGAKTAAAVISSLGGLDDIERNIDSVAALPLRGASRIKDRLQEHW 240 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQLRLV 250 A L R++ARLQ+++ NL + L Sbjct: 241 PQALLSRELARLQSEIPGLENLPEFHLT 268 >UniRef50_C4Z982 DNA polymerase I n=2 Tax=Clostridiales RepID=C4Z982_EUBR3 Length = 903 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 128/268 (47%), Gaps = 24/268 (8%) Query: 1 MAVHLLIVDALNLIRRIHAVQGSPCVETCQ-----------HALDQLIMHSQPTHAVAVF 49 M+ L+++D +++ R A G P + + + + +++ +P + F Sbjct: 1 MSEKLVLIDGHSILNR--AYHGLPDLTNSEGLHTNAVYGFLNIMFKILDEEKPDYLTVAF 58 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH+ YK R PM EEL ++P ++ G+ G EADD+ T Sbjct: 59 D--VHAPTFRHRMFDAYKGTRKPMDEELRQQVPMIKEMLTAMGIKIVEKEGYEADDILGT 116 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR-------WLDAPFIDKEFGVQP 162 L+V+ +AG I+S D+ QL + + +R K+ + A I+K +GV P Sbjct: 117 LSVRAEKAGMDVAIISGDRDLLQLATDHVMVRIPKTKKTGTEIENYNTADVIEK-YGVTP 175 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETH 221 ++ D L G +S +PGV GIG K+A L+ ++ +E ++E+ + V + K + + Sbjct: 176 KEFIDVKALQGDTSDNIPGVPGIGEKTAGALIAKYHCIEAVHEDAENVKPPRASKNIVEY 235 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLRL 249 E A + +++A + D +D +L Sbjct: 236 WEQALMSKELATIILDAPVDYEFSDAKL 263 >UniRef50_Q2GD93 DNA polymerase I n=2 Tax=Neorickettsia RepID=Q2GD93_NEOSM Length = 829 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 10/255 (3%) Query: 1 MAVHLLIVDALNLIRRIH-----AVQGSPCVETCQHALDQLIMH--SQPTHAVAVFDDEN 53 M+ L+I+DA N + + V L+ L+ H ++P + V D + Sbjct: 1 MSETLMIIDAYNFLFSAYFALPNLTHNELPVGAVYGFLNILLKHLRTKPEYLVVALD--H 58 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 S +R +YKA RPP+P L + LR + + G EADD+ ATL K Sbjct: 59 GKSTFRETIYNNYKANRPPVPGNLTPQFALLRECVDVLNLNPLEIEGFEADDVIATLVRK 118 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 +++ + I+STDK QL++ + + + + R + + ++FGV P Q+ D+ L G Sbjct: 119 FSKSDLKIKILSTDKDLMQLVNENVHVINPIKNRIIGVNEVKEKFGVFPTQMTDFLSLVG 178 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR 233 +S +PGV GIG K+A +LL F ++E N + + ++ L H + L + + Sbjct: 179 DTSDNIPGVPGIGVKTAAKLLNTFGAIENFRLN-EISPARIKESLLRHHDQLTLSKRLVS 237 Query: 234 LQTDLHIDGNLQQLR 248 L D++I +L +R Sbjct: 238 LVDDINIQCSLDCIR 252 >UniRef50_Q72ES3 DNA polymerase I n=3 Tax=Desulfovibrio vulgaris RepID=Q72ES3_DESVH Length = 1015 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 5/207 (2%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L +L+ +P H V D + +RH P YKA R PE L ++ +R G Sbjct: 51 LLRLLREEKPRHFAFVLD--GKGPTFRHDLFPLYKAQRAATPEPLVQQLEPIRRMVTALG 108 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK--RWLD 150 +P + G EADD A+LA + I+ DK Q L P + + D K + Sbjct: 109 LPLEVSDGCEADDCIASLAARYRDE-RPVVIIGADKDLKQCLHPNVVLWDPGAKEEKLTT 167 Query: 151 APFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV 210 E G+ P Q PD + G +S +PG+ G+GPK+A+++ +F +LE I + D + Sbjct: 168 LASFTAETGLTPAQWPDVQAVIGDTSDNIPGIPGVGPKTASKIFADFPTLEDIRDGFDRL 227 Query: 211 AEKWRKKLETHKEMAFLCRDIARLQTD 237 +KK E H + FL R + L D Sbjct: 228 PPNLQKKFEQHLDAMFLYRQLTTLAID 254 >UniRef50_C7H3Z2 DNA polymerase I n=2 Tax=Ruminococcaceae RepID=C7H3Z2_9FIRM Length = 859 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 14/219 (6%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 ++ L+ +P FD ++ + +RH+ YK R MP+EL +MP L+ G Sbjct: 47 MNSLLRECEPDEVAVAFDLKHPT--FRHEMYDGYKGTRHAMPDELAQQMPILKELLTDLG 104 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI--------RDYF 144 S G EADD+ TLA + + D+ QL+S T + R Sbjct: 105 YRQVSAKGWEADDILGTLAAACEARRDDCFLATGDRDSLQLVSETTTVLLATSAMGRSKT 164 Query: 145 QKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIY 204 + LDA I +++G++P+QL + L G +S +PGV GIG K+A L+ F +L+ +Y Sbjct: 165 ETMDLDA--IHEKYGIEPKQLIEVKSLMGDTSDNIPGVKGIGEKTAMTLVKNFGTLDSVY 222 Query: 205 ENLDA--VAEKWRKKLETHKEMAFLCRDIARLQTDLHID 241 ++LD+ + + R+ L +E A+L + ++TD ID Sbjct: 223 DHLDSPIIKPRQRENLLACREDAYLSHTLGTIRTDAPID 261 >UniRef50_D1R879 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R879_9CHLA Length = 896 Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 3/208 (1%) Query: 35 QLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVP 94 +L P H V VFD N + R + P+YKA R MP +L ++ + G+P Sbjct: 49 KLFKDFNPEHLVCVFDGPNNAKK-RLELYPNYKAHRSAMPPDLRYQIEWAQDFCSLMGIP 107 Query: 95 CWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSP-TLRIRDYFQKRWLDAPF 153 S EADD T+A Q G + ++DK QL++P + + LDA Sbjct: 108 YLSVPEVEADDTMGTVAKWAEQQGAITYLCTSDKDMAQLVNPHVFLLNTHKDNTILDAAS 167 Query: 154 IDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AE 212 I+KE+GV P Q+ D + G +S +PG+ G G K+A LL +F SL+ I + + V + Sbjct: 168 IEKEWGVPPSQMVDLLAMTGDASDNIPGLTGFGEKTAAALLRQFGSLDYILAHPEEVPGK 227 Query: 213 KWRKKLETHKEMAFLCRDIARLQTDLHI 240 K ++ L+T ++A + RD+ + + I Sbjct: 228 KKQETLQTEADLARISRDLVTIDLSVEI 255 >UniRef50_Q9HT80 DNA polymerase I n=9 Tax=Gammaproteobacteria RepID=DPO1_PSEAE Length = 913 Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 117/257 (45%), Gaps = 31/257 (12%) Query: 20 VQGSPCVETCQHALDQLIMHS-QPTHAV--------------------AVFDDENRSSGW 58 V GS + HAL L + +PT AV VFD + + Sbjct: 9 VDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFD--AKGPTF 66 Query: 59 RHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAG 118 R + +YKA RP MP++L ++ L A+ G+P G EADD+ TLA A Sbjct: 67 RDELFAEYKANRPSMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLARSSAAAD 126 Query: 119 HQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSK 178 I + DK QL+ + + + LD + ++FGV P+ + D+ L G Sbjct: 127 RPVVISTGDKDMAQLVDGHITLVNTMTGSRLDVDGVKEKFGVGPELIIDFLALMGDKVDN 186 Query: 179 VPGVAGIGPKSA-TQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEMAFLCRD 230 +PGV G+G K+A L LE +Y +LD V A+ KLE ++E AFL Sbjct: 187 IPGVPGVGEKTALGLLTGVGGGLEVLYASLDKVPELPIRGAKGLPAKLEENREQAFLSYQ 246 Query: 231 IARLQTDLHIDGNLQQL 247 +A ++TD+ +D + +L Sbjct: 247 LATIKTDVELDVEIDKL 263 >UniRef50_C5B5M0 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5M0_METEA Length = 729 Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 101/222 (45%), Gaps = 14/222 (6%) Query: 40 SQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTS 99 ++P+H FD RS R + P YKA RP P +L P R A G C Sbjct: 68 TRPSHLGIFFDHSRRSH--RSELFPGYKANRPEPPADLEALKPLFRDAVRAFGYGCIEAE 125 Query: 100 GNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRD----------YFQKRWL 149 EADDL AT A + G +V +DK QL+ PT+ D Y R Sbjct: 126 NYEADDLIATYATAASARGAHVLMVGSDKDLLQLVGPTVFAFDFEYGVPGRSGYRPARLF 185 Query: 150 DAPFIDKEF-GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD 208 DA + + G P++L D L G + VPGV GIG K+A +L+ E+ LE + N D Sbjct: 186 DAAAVAAAWEGTPPERLGDVLALMGDQTDNVPGVPGIGMKTAAKLVAEYGDLETLLANAD 245 Query: 209 AVAEKWRK-KLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 A+ + R+ L H E A L R + L+ + + L L L Sbjct: 246 AIKQPGRRDALLAHAETARLSRRLVELERNAPMPVPLDDLLL 287 >UniRef50_Q1YTV3 Exodeoxyribonuclease IX n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTV3_9GAMM Length = 301 Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 113/245 (46%), Gaps = 14/245 (5%) Query: 10 ALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAG 69 AL+ HAV G L ++ + P H FD E+ SG+RHQ DYKA Sbjct: 25 ALDSGHSTHAVYGFTAF------LLDMLRNKNPEHLFCAFD-ESLGSGFRHQLCSDYKAN 77 Query: 70 RPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKG 129 R E L ++ A R G+ ++ EADDL +A A Q +V+ DK Sbjct: 78 RELPDEALAFQLNACRQLCRVLGIAEMASDTYEADDLIGAVAKNARLANSQPVVVTRDKD 137 Query: 130 YCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKS 189 QL+ D+ + ++K+ + QQ+ D+ L G SS + GV G+G K+ Sbjct: 138 LMQLIEAEDLFWDFGKAPPKTQRQVEKDLEIGCQQMADFLALTGDSSDNIAGVPGVGAKT 197 Query: 190 ATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEMAFLCRDIARLQTDLHIDG 242 A QLL+ F ++ I ++LD + A K K++ H++ L R + + TD+ Sbjct: 198 AKQLLLHFPDIDAILDHLDQLQDLPIRGASKLADKIDNHRDQLLLARQLTTICTDIAEAP 257 Query: 243 NLQQL 247 L+Q+ Sbjct: 258 KLEQI 262 >UniRef50_B9ZKF5 5'-3' exonuclease n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKF5_9GAMM Length = 315 Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 94/182 (51%), Gaps = 2/182 (1%) Query: 31 HALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQ 90 H+L Q + P FD+ R G+RH+ P YKA RPP P EL ++ +R Q Sbjct: 51 HSLCQWLPACAPGPIAFCFDESLRQ-GFRHRLDPTYKAHRPPAPPELREQFARIRELLGQ 109 Query: 91 RGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQ-LLSPTLRIRDYFQKRWL 149 G + EADDL A+LA AG + + S DK Q +L R+ D + L Sbjct: 110 LGFRTLAHPEYEADDLIASLARAGRAAGFRIEVKSADKDLTQVILGDQDRLHDPERGTAL 169 Query: 150 DAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDA 209 D I+K F ++P+Q+ D LAG +S +PG+ G+GP++A ++L LE + + A Sbjct: 170 DRRAIEKRFRIRPEQVADMLALAGDASDNIPGIEGVGPRTAARILRRLGDLETVLADPQA 229 Query: 210 VA 211 VA Sbjct: 230 VA 231 >UniRef50_D1BM52 DNA polymerase I n=6 Tax=Veillonellaceae RepID=D1BM52_VEIPT Length = 873 Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 127/252 (50%), Gaps = 20/252 (7%) Query: 5 LLIVDALNLIRR-------IHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 L+I+D +L+ R + + G+P V L +L P + FD ++ Sbjct: 4 LMIIDGSSLLFRAFFALPPLKSALGTPTNAVYGFLTMLIKLYEEINPDYIAVAFDKGRQT 63 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +R + +YK RP PE+L + ++ + G+ G E DD+ +L+ K Sbjct: 64 --FRTEMYSEYKGNRPDAPEDLRPQFSLIQDVLKALGICVIEEEGFEGDDILGSLSKKFG 121 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPF------IDKEFGVQPQQLPDYW 169 I++ D+ QL++ + + K+ + +++ +G P ++ + Sbjct: 122 APEMAVQIITGDRDNLQLVTEHSHV--FLTKKGISDMLEVTLDNMEELYGYGPDKVIEMK 179 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLC 228 L G SS +PGV G+G K+A +L+ E+ +LE +YE+++ ++ +K +++L +KE+AFL Sbjct: 180 ALMGDSSDNIPGVPGVGEKTALKLITEYGNLESVYEHIEDISGKKLKERLVENKELAFLS 239 Query: 229 RDIARLQTDLHI 240 R++A ++TD+ + Sbjct: 240 RELATIKTDMEL 251 >UniRef50_C0ZE02 Putative 5'-3' exonuclease n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE02_BREBN Length = 292 Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 3/209 (1%) Query: 40 SQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTS 99 ++P+H V +D +R S R Q YK+ R P+EL + ++ + VP Sbjct: 55 TRPSHLVVGWDVASRESLVRSQWYDGYKSNRQAAPDELIPQFDLVKEVTDAFSVPNLGCP 114 Query: 100 GNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIR---DYFQKRWLDAPFIDK 156 G E DD+ TL+ ++++ GH+ I + D QL+S + ++ + + + + Sbjct: 115 GFEGDDVLGTLSTRLSEEGHEVIIATGDYDSLQLISERVSVKILKNGGKHEHYNPASLLA 174 Query: 157 EFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRK 216 G+ P+Q+ D L G +S +PG GIG K+AT+L+ E L+ +Y NL K R Sbjct: 175 LRGITPEQVVDVKALMGDASDCIPGCPGIGEKTATKLITEHGDLDNLYVNLANCTPKMRS 234 Query: 217 KLETHKEMAFLCRDIARLQTDLHIDGNLQ 245 KLE +++ +L R +A + D+ ++ L+ Sbjct: 235 KLEENRDQVYLSRKLATIIRDVPVEYALE 263 >UniRef50_C7GZ50 DNA polymerase I n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ50_9FIRM Length = 918 Score = 99.8 bits (247), Expect = 8e-20, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 10/215 (4%) Query: 42 PTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGN 101 P + FD ++ +RH++ DYKA R +EL ++P ++ + Sbjct: 52 PDYIAVAFDLGGKT--FRHEKFDDYKANRRKTDDELLMQIPVIKEILAAMNIKILQKKAF 109 Query: 102 EADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL------DAPFID 155 E DD+ + A V + I+S DK QL+S +I + KR + D + Sbjct: 110 EGDDIIGSFARFVESDDVEVIIISGDKDMFQLISDNTKIA--YTKRGISNIDIYDIQKFE 167 Query: 156 KEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR 215 E+ P+ DY + G SS GV GIG K A L+ ++Q++E IY+N+D ++ K + Sbjct: 168 DEYNFAPKHFIDYKAIMGDSSDNYKGVKGIGDKGARNLVTKYQTIENIYQNIDEISGKTK 227 Query: 216 KKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 LE K AF+ +++A + +L + L ++LV Sbjct: 228 LALENSKMQAFMGKELATIIVNLDLGLTLDDVKLV 262 >UniRef50_A7ILD7 5'-3' exonuclease n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7ILD7_XANP2 Length = 299 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 119/262 (45%), Gaps = 22/262 (8%) Query: 4 HLLIVDALNLIRRIHAVQGSPCV--ETCQHALDQL---------IMHSQP-----THAVA 47 H+L++D + + R A G+P V + H + + ++H +H Sbjct: 11 HVLLIDGSSFLWR--AFYGAPAVIRRSDGHPVGAISGFCWMMWTLLHETSAVPPASHRAV 68 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 +FD R+ WRH L YKA R P+++ + +RAA +P +G EADDL Sbjct: 69 IFDAGRRN--WRHDILASYKANRNEPPDDIKRQFKPVRAACAALPIPSVELAGYEADDLI 126 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLS--PTLRIRDYFQKRWLDAPFIDKEFGVQPQQL 165 AT K +G TI + DK QL+ + + D + R + + + FGV P + Sbjct: 127 ATYTRKAVASGAGVTIATGDKDLAQLVDDRTGVCLYDASKGRTMREAEVLERFGVPPAGV 186 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 D LAG ++ +PGV GIG K A +L+ SLE I A EK K+ H A Sbjct: 187 LDLLALAGDTTDNIPGVPGIGAKRAAELVSRHGSLEDIIAAGTARKEKQAAKVADHAASA 246 Query: 226 FLCRDIARLQTDLHIDGNLQQL 247 + R +A L T + + L L Sbjct: 247 RISRSLATLDTAVPVPLALAHL 268 >UniRef50_C5CIW2 DNA polymerase I n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIW2_KOSOT Length = 896 Score = 99.4 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 4/206 (1%) Query: 47 AVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDL 106 A+F + + + RH YKA R MP+ L ++ + E G+ S + EADD+ Sbjct: 57 ALFAFDRKEATHRHDLFEGYKATRAEMPDALVAQLKYIPDLVEGFGIKFHSVATLEADDI 116 Query: 107 AATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQP 162 AT K + IVS DK QL+ +++ + D ++++FG+ P Sbjct: 117 IATAVTKYRDKFDEIVIVSGDKDILQLVDEKVKVLRFVSGLTDLEEYDRRKVEEKFGLPP 176 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHK 222 +++ + L G +S +PGV GIG K+A +LL E+ S++ IY+N+ ++ RKKL K Sbjct: 177 EKIYELLSLCGDTSDNIPGVPGIGIKTALKLLKEYGSIDEIYKNIRKLSPGLRKKLMDGK 236 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQLR 248 + + + + RL TD + L++LR Sbjct: 237 KALEMSKKLVRLVTDADLHIELEELR 262 >UniRef50_A8VW38 Amino acid-binding ACT domain protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW38_9BACI Length = 297 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/256 (30%), Positives = 116/256 (45%), Gaps = 25/256 (9%) Query: 5 LLIVDALNLIRRIHAVQG----------------SPCVETCQHALDQLIMHSQPTHAVAV 48 LL++D NL+ R + + V L QLI Q +V V Sbjct: 6 LLLIDGFNLLSRGYFATSFNKEPEELPRNGEGRFTNAVNVFMTKLFQLI-REQNIDSVHV 64 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 D R+ G+R+Q YKA R +PE L D+ L VP S G EADD+ Sbjct: 65 SWDGKRNEGFRNQEYDFYKAQRTDLPEPLIDQYHFLTEILADLQVPQSSAPGYEADDIMG 124 Query: 109 TLAVKVTQAGHQATIV-STDKGYCQLLSPTL--RIRDYFQKRWLDAPFIDKEFGVQPQQL 165 TLA + H I+ S D+ QL+ + R+ Q+ D +EF + P Q Sbjct: 125 TLAKRWGNERHGDVILYSNDRDLFQLIDEHISQRVAKKKQEVVYDLNLFREEFDLLPSQW 184 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIY-----ENLDAVAEKWRKKLET 220 D L G SS +PG G+G KSA L+ ++SL G+Y + LD V +++RK L Sbjct: 185 VDVKALLGDSSDNIPGCPGVGEKSAYPLIRHYESLTGVYKALEADELDPVFKRYRKNLIE 244 Query: 221 HKEMAFLCRDIARLQT 236 +E+A + +A ++T Sbjct: 245 GEELARISYKLATIET 260 >UniRef50_A7HD60 DNA polymerase I n=2 Tax=Cystobacterineae RepID=A7HD60_ANADF Length = 899 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 16/247 (6%) Query: 6 LIVDALNLIRRIHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRL 63 + A + I + +G+P V L + + PTH V V D +S +R++ Sbjct: 12 FVFRAYHAIPHLSTTRGTPTNAVYGFTTMLLKALREHAPTHVVLVMDAGRKS--FRNEID 69 Query: 64 PDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATI 123 P YKA RP P++L + P +R + VP G EADD+ ATLA + + G + + Sbjct: 70 PAYKANRPEAPDDLQVQFPLVREVADALAVPRIEEPGVEADDVIATLASRAREQGWEVVV 129 Query: 124 VSTDKGYCQLLSPTLRIRDYFQKR-----WLDAPFIDKEFGVQPQQLPDYWGLAGISSSK 178 V+ DK + QL+ L + D + W ++K+ GV+P Q+ +Y + G Sbjct: 130 VTGDKDFGQLVDERLSLYDPMAEASGRGGWTGPGEVEKKLGVRPDQVIEYMAILGDKIDN 189 Query: 179 VPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEMAFLCRDI 231 VPG+ GIG +A L+ F ++E + + + EK ++K+ +E R + Sbjct: 190 VPGIPGIGEVTAAALVRHFGTVEEMLRRPEEIKAALSRGGEKVKEKIVASEERIRKNRQL 249 Query: 232 ARLQTDL 238 L+ DL Sbjct: 250 VSLRRDL 256 >UniRef50_Q2JPZ4 DNA polymerase I n=3 Tax=Cyanobacteria RepID=Q2JPZ4_SYNJB Length = 931 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 8/214 (3%) Query: 42 PTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGN 101 PTH FD R +RH+ YK+GRP P E +++ L+ +P G Sbjct: 59 PTHVAVAFD--TRQPTFRHEADETYKSGRPETPPEFIEDVENLKQVLTALRIPILVVPGF 116 Query: 102 EADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRD-YFQKRWLDAPF----IDK 156 EADD+ TL+ ++ ++ I+S D+ QL+ R+R + + + F + + Sbjct: 117 EADDILGTLS-RLAPQDYRVQILSGDQDLFQLIDTDGRVRVLHLNSKDRISEFGPEQVKE 175 Query: 157 EFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRK 216 + G+ P Q+ DY L G S +PGV GIGPK A +LL + SL+ I+++LD + K ++ Sbjct: 176 KLGIWPWQVVDYKALCGDPSDNIPGVKGIGPKRAVELLERYGSLDEIFDHLDEIQGKVQQ 235 Query: 217 KLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 L+ A + +AR++ D+ + + + ++L Sbjct: 236 YLKEGIPAAHHSQFMARIKCDVPLSPDWESMKLT 269 >UniRef50_C2BWF0 DNA-directed DNA polymerase n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWF0_9ACTO Length = 932 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 6/216 (2%) Query: 36 LIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPC 95 +I +PTH A FD S +R PDYK GR P E ++ ++ G+ Sbjct: 48 MIRAEKPTHIGAAFDLSRHS--FRTDIYPDYKGGRAETPPEFIGQVENIQKMLSAMGIKW 105 Query: 96 WSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDA 151 + EADD+ ATLA K T++G + + S D+ QL+S + + R + + + Sbjct: 106 LTEPNVEADDILATLATKGTKSGMEVLVSSGDRDSFQLISDDVTVLYPGRSISETKRMTP 165 Query: 152 PFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA 211 + + V PQQ P+ L G + +PGV +G K A + E+ SL+ + E+ D + Sbjct: 166 QAVKDRYDVWPQQYPEIAALVGEHADNLPGVPLVGEKVAASWINEYGSLDSLLEHRDELK 225 Query: 212 EKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 K + L H + R + RL+TDL + +L+ L Sbjct: 226 GKRGENLRQHIDDVLRNRQLNRLRTDLQLPLSLEDL 261 >UniRef50_UPI0001C17162 DNA polymerase A n=2 Tax=Nostocaceae RepID=UPI0001C17162 Length = 988 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 118/247 (47%), Gaps = 14/247 (5%) Query: 14 IRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPM 73 +R + + C Q LD +I+ QP FD + +RH+ +YKA R Sbjct: 37 LRTKSGIPTNVCFGFMQCLLD-VIVKEQPQAIAVAFD--LAAPTFRHEADSNYKANRADT 93 Query: 74 PEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQL 133 PE+ ++ L E + + G EADD+ TLA +G++ I+S D+ QL Sbjct: 94 PEDFIPDLVNLYDLLEALNIQVITQPGYEADDILGTLAETSVCSGYRVKILSGDRDLFQL 153 Query: 134 LSPT--LRIRDYFQKRWLDAPFIDKEF---------GVQPQQLPDYWGLAGISSSKVPGV 182 + + + ++ + + KEF GV P Q+ D+ L G +S +PGV Sbjct: 154 IDENKGISVLNFTPEALKSSSNGIKEFHTLDVKEKLGVLPTQVVDFKALCGDTSDNIPGV 213 Query: 183 AGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDG 242 GIG K+A +LL ++SL IY N++ + ++KL +E AF + +A++ TD+ I Sbjct: 214 KGIGEKTAVKLLNIYKSLTEIYANINKITGANQQKLIAGQESAFHSQYLAKIVTDVPITI 273 Query: 243 NLQQLRL 249 +Q L Sbjct: 274 KIQDCHL 280 >UniRef50_Q11NX3 DNA polymerase I n=11 Tax=Bacteria RepID=Q11NX3_CYTH3 Length = 946 Score = 98.2 bits (243), Expect = 2e-19, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 129/261 (49%), Gaps = 18/261 (6%) Query: 5 LLIVDALNLIRRIH-AVQGSPCVETC----------QHALDQLIMHSQPTHAVAVFDDEN 53 L ++DA+ LI R H A +P V + ++L ++++ +PTH FD + Sbjct: 4 LFLLDAMALIYRAHFAFSKNPRVTSTGISTGAVFGFTNSLLEILLKEKPTHIGVAFDLQG 63 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH +YKA R PE++ +P + E +P G EADD+ T + Sbjct: 64 PT--FRHDNFTEYKANRQEQPEDISVAIPYIYRLLEGMNIPILGVPGYEADDIVGTFSKI 121 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRI-RDYFQKRWLDAPFIDK---EFGVQP-QQLPDY 168 G +++ DK Y QL++ + + R + ++ I+K +F ++ Q+ D Sbjct: 122 APPLGFDVYMMTMDKDYMQLVNEHVFLYRPAYMGNDVEIYDINKVLAKFNIKEVDQVRDI 181 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 GL G + +PG+ GIG K+A +L+ +F S+E + +N D + K ++ + L Sbjct: 182 LGLQGDTVDNIPGIPGIGEKTAQKLIADFGSVENLIKNADQLKGKQKENVINFAAQGLLS 241 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 +++A + ++ I+ + + LR+ Sbjct: 242 KELATIHCEVPIEFDEEALRV 262 >UniRef50_A6G4C0 DNA polymerase I n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G4C0_9DELT Length = 315 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/251 (29%), Positives = 117/251 (46%), Gaps = 20/251 (7%) Query: 4 HLLIVDALNLIRRIHAV---------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDE 52 + +VDA NL+ R++ Q +P V + L + P + +FD Sbjct: 16 RVFLVDANNLVHRLYHASAPRFAPNDQSTPINAVIAWGQRMRALRLGHDPAFLLPIFDGP 75 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 S WR PDYKA R P+EL + + + G+ G EADDL A Sbjct: 76 GDS--WRRALAPDYKAKRKGQPDELRGQWEPIWHLSQALGLSPLHQPGLEADDLIGAYAN 133 Query: 113 KVTQAGHQATIVSTDKGYCQLL------SPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLP 166 +A + TIVS D QL+ ++R D F + + ++ +FGV P++L Sbjct: 134 ACVEAELEVTIVSNDSDLMQLVRGPDRGPGSVRQLDAFTGKRVGPVQVEAKFGVPPERLA 193 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR-KKLETHKEMA 225 + + L G VPG+ GIGPK AT+LL + SLEG+ +N + ++ R +++ H++ A Sbjct: 194 ELFALTGSKGDGVPGIPGIGPKIATELLATYGSLEGVLDNAALIPQRKRSERILAHRDDA 253 Query: 226 FLCRDIARLQT 236 L + L+ Sbjct: 254 RLSLQLTALRV 264 >UniRef50_Q3ABL3 DNA polymerase I n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABL3_CARHZ Length = 831 Score = 97.8 bits (242), Expect = 3e-19, Method: Composition-based stats. Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 10/223 (4%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L ++I +P + FD ++ +R ++ YK R P+EL + +R + Sbjct: 41 LFRVIKDEKPEYLAVAFDISRKT--FRTEQFTAYKGHRKEAPDELVPQFALVREVLKVLN 98 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW---- 148 VP G EADD+ L+ GH+ I + D+ QL+ + Y K+ Sbjct: 99 VPYIELDGYEADDIIGHLSRAFAGQGHEVVIYTADRDMLQLVDEKTVV--YLTKKGITEL 156 Query: 149 --LDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYEN 206 +D I + +G++P+QL D GL G S +PGV GIG K+A L+ + S+E + + Sbjct: 157 VKMDLAAILENYGLKPKQLVDVKGLMGDPSDNIPGVPGIGEKTALDLIKTYGSVEEVLAH 216 Query: 207 LDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 D + K R+KL H+ +A + + +A + ++ ++ +L+ L++ Sbjct: 217 KDELKPKLREKLAEHENLAKISKQLATILREIPLEISLEDLKV 259 >UniRef50_B5YG86 DNA polymerase I n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG86_THEYD Length = 838 Score = 97.8 bits (242), Expect = 3e-19, Method: Composition-based stats. Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 13/236 (5%) Query: 6 LIVDALNLIRRIHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRL 63 I A + I+ + +G P + L +L+ + + FD + + RH+ Sbjct: 12 FIYRAYHAIKGLSTSRGIPTNAIYGFTRMLLKLLREKNVKYILCAFDSPHPTK--RHKIY 69 Query: 64 PDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQ-AGHQAT 122 +YK RP P++L ++ ++ + G+ G EADD+ AT + Q A Sbjct: 70 EEYKITRPETPKDLPVQIDYIKQIIDALGITRIEVPGYEADDIIATAVGVINQFAPLNFI 129 Query: 123 IVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGV 182 I+S DK QL+S ++I D + +D ++ K++GV P++L D+ L G + +PGV Sbjct: 130 IISIDKDMLQLVSDNVKIYDPINELIIDREYVIKKYGVPPEKLNDFMALVGDAIDNIPGV 189 Query: 183 AGIGPKSATQLLVEFQSLEGIYENLDAVA--------EKWRKKLETHKEMAFLCRD 230 GIG K+A L+ + S+E I +NLD + +K K L+ KE+ L +D Sbjct: 190 KGIGEKTAANLIKRYGSIENILKNLDIIKPLKVSDIIKKNIKSLQLSKELVILRKD 245 >UniRef50_D0J9B5 DNA polymerase I n=2 Tax=Blattabacterium RepID=D0J9B5_BLASP Length = 305 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 9/190 (4%) Query: 18 HAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEEL 77 + SP + ++ L +P++ A FD ++ +R + P YKA R P ++ Sbjct: 31 QGINTSPIIHFTYFLINTL-NEEKPSYMAAFFDTSRKT--FRKKEYPKYKAHRKKTPRDI 87 Query: 78 HDEMPALRAAFEQ-RGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSP 136 MP + + R ++ G EADDL T+A K + G+ I++ DK + QL++ Sbjct: 88 SIAMPYVVNILKSFRISSFYAKDGYEADDLIGTIAKKAEKKGYMIYIITLDKDFSQLVTK 147 Query: 137 TLRI-RDYFQ---KRWLDAPFIDKEFGV-QPQQLPDYWGLAGISSSKVPGVAGIGPKSAT 191 ++I R F+ K+ L I K+FGV +P+Q+ D W + G SS +PG+ GIG K A Sbjct: 148 NIQIYRPPFKGNPKKILGIEEIKKKFGVIEPKQVIDLWSMMGDSSDNIPGLPGIGEKYAR 207 Query: 192 QLLVEFQSLE 201 + + ++ SLE Sbjct: 208 KFIQKYGSLE 217 >UniRef50_Q7NBN5 Exo n=1 Tax=Mycoplasma gallisepticum RepID=Q7NBN5_MYCGA Length = 298 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/236 (25%), Positives = 118/236 (50%), Gaps = 7/236 (2%) Query: 19 AVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELH 78 ++ S ++T +++++ Q +A+ FD + ++ R + YKA R E L Sbjct: 44 GIRPSNGIKTSLKMINKILNSDQYDYALVAFDSKEKTD--RAKIYEGYKATRKKPVEGLI 101 Query: 79 DEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTL 138 +++ AL+ F G+ S+ G EADDL + + + I ++D+ QL++ Sbjct: 102 EQLVALQDGFSYLGLNVLSSPGIEADDLIGSFSALANKDQITCHIYTSDQDIFQLVNQYN 161 Query: 139 RIRDYFQKRWLDAPFIDKEF-----GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQL 193 + + + + ++ F ++P+ + Y L G SS +PGV GIG K+A QL Sbjct: 162 VVYQFVKGVSVFNQVHERNFQEHFHDLKPEDVIQYKALVGDSSDNIPGVKGIGEKTAVQL 221 Query: 194 LVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 + ++ +++ IY NLD + + KL +K +L +++A ++TD +D + +L Sbjct: 222 IKDYLNIDNIYANLDQIKPSIKDKLVANKANCYLSKELATIRTDCLVDQYINNFKL 277 >UniRef50_B0MYJ0 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYJ0_9BACT Length = 959 Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 117/251 (46%), Gaps = 28/251 (11%) Query: 5 LLIVDALNLI-RRIHAVQGSP----------CVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L +VDA LI + +A G P V L + P FD + Sbjct: 4 LFLVDAYALIFKYYYAFMGRPMRNRAGMNTSVVFGFTKFLRDIQKREHPDLLGVAFDPKG 63 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 S +R + P+YKA R PE++ +P ++ E +P G EADD+ TLA K Sbjct: 64 GS--FRREIFPEYKANRAETPEDILLSVPYVKRIVEAMCIPVLEVPGYEADDVIGTLAHK 121 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK-----RWLDAPFIDKEFGVQ-PQQLPD 167 +AG+ +V+ DK Y QL+ +I Y QK + I +++G++ PQ + D Sbjct: 122 GVEAGYDVFMVTPDKDYGQLVCDNCKI--YKQKGNDGIEIVGREAIREKYGIENPQLVRD 179 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-------WRKKLET 220 L G +S +PGV GIG K+A +L+ E+ ++E I +N D + + W KL Sbjct: 180 ILALWGDASDNIPGVPGIGEKTACKLVQEWGTVENILQNADRIKSRQGEKIAEWGDKLLL 239 Query: 221 HKEMAFLCRDI 231 K + +C D+ Sbjct: 240 AKRLTTICLDV 250 >UniRef50_UPI0001976BF8 DNA polymerase I n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976BF8 Length = 943 Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 17/258 (6%) Query: 5 LLIVDALNLIRR-----------IHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 LL+VD +L R A Q + V L Q++ +P H FD Sbjct: 16 LLVVDGHSLAFRAFFALPAENFSTQAGQATNAVWGFATMLSQVLDSEKPDHLAVAFD--M 73 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +R++ LP YK R PE+L ++P ++ GV G E DD+ ATLA Sbjct: 74 KGGTFRNEMLPQYKGTREAAPEDLLTQLPLIQKMLTALGVTYVEKQGYEGDDIIATLAAM 133 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 ++G+ ++S D+ QL+ + + + + + ++ ++ V P Q PD Sbjct: 134 GERSGYDTLVLSGDRDAFQLIDERVTVLYPGHHFKDLKHMTPQAVEDKYHVGPAQYPDLA 193 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G ++ +PGV G+G A + + ++ LEGI E+ D + K + L + E L R Sbjct: 194 ALRGETADNIPGVPGVGDGFAAKWINQYGGLEGIIEHADEIGGKKGESLRENIEQVKLNR 253 Query: 230 DIARLQTDLHIDGNLQQL 247 + L+ D+ + ++ L Sbjct: 254 KVNALRRDVDLGIGIEDL 271 >UniRef50_B8FU82 DNA polymerase I n=2 Tax=Desulfitobacterium hafniense RepID=B8FU82_DESHD Length = 873 Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 127/259 (49%), Gaps = 20/259 (7%) Query: 5 LLIVDALNLIRR-------IHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 +LI+D +L R + G P + L +L++ +P + V FD + Sbjct: 4 ILILDGNSLANRTFYALPMMTTADGKPTNVLHGFMTMLLRLLLEQKPDYWVVAFDKTKAT 63 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 R ++ DYKA R P+ L + L+ +P G EADD+ AT+ Sbjct: 64 V--RIEQYADYKAQRKETPDALKPQFDFLKELLTAFAMPILECPGYEADDIIATVTSLAE 121 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL------DAPFIDKEFGVQPQQLPDYW 169 Q + I + D+ QL+SP R Y ++ + D + +++ ++P Q+ D Sbjct: 122 QREWETQIYTGDRDALQLISP--RTTVYLTRKGITEVDAYDEGALYEKYQLRPAQIIDLK 179 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLC 228 GL G +S +PGV G+G K+A +LL E+ S+E + +N+D ++ +K ++ L + + A L Sbjct: 180 GLMGDASDNIPGVPGVGEKTALKLLWEYGSVENVLDNIDKISGKKLQENLRNNTDKALLS 239 Query: 229 RDIARLQTDLHIDGNLQQL 247 + +A + D+ ++ +L +L Sbjct: 240 KKLATMLYDIPLEIDLDRL 258 >UniRef50_B9Y7P1 DNA polymerase I n=2 Tax=Erysipelotrichaceae RepID=B9Y7P1_9FIRM Length = 900 Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 12/206 (5%) Query: 41 QPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSG 100 QP + FD + +RH+ +YK GR P+ L ++ P +R E G+ + + Sbjct: 81 QPDAMLVAFDKGKHT--FRHELFAEYKGGRKETPDALVEQFPIVREYLEAAGIKQFEMTD 138 Query: 101 NEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLD------APFI 154 EADD+ ++ K ++S+D+ QL+ T + + K+ + + Sbjct: 139 IEADDIIGSMIKKYPD--WDINVLSSDRDMLQLIDETTSV--WLMKKGISDIEEMTVESL 194 Query: 155 DKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW 214 ++ G+ P Q+ D GL G +S +PG+ +G K+A +LL +F ++E + N D + K Sbjct: 195 KEKMGITPDQIRDLKGLMGDASDNIPGIPKVGEKTALKLLEQFGTVENLIANTDQLKGKL 254 Query: 215 RKKLETHKEMAFLCRDIARLQTDLHI 240 + +E K+ A L + +A ++TD+ I Sbjct: 255 KDNVEAFKDQALLSKRLATIKTDVEI 280 >UniRef50_D2RAL7 DNA-directed DNA polymerase n=2 Tax=Gardnerella vaginalis RepID=D2RAL7_GARVA Length = 1025 Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 6/212 (2%) Query: 33 LDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRG 92 L Q++ +P FD + +R+ LP YK R P+EL ++P ++ + G Sbjct: 59 LSQVVKKEKPDRLAIAFD--VKGGTFRNTMLPQYKGTRDAAPQELLSQLPIIQQMLKALG 116 Query: 93 VPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRW 148 V G E DD+ TLAV + AG++ ++S D+ QL+ + + + + + Sbjct: 117 VTYIEKPGYEGDDVIGTLAVMGSNAGYRTLVLSGDRDAFQLIDDNITVLYPGQHFKDLKE 176 Query: 149 LDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD 208 +D + +++ V P+Q PD L G ++ +PGV G+G A + + +F SLE I E+ + Sbjct: 177 MDKNAVYEKYHVTPKQYPDLAALRGETADNIPGVPGVGDGYAAKWINQFGSLENIIEHSN 236 Query: 209 AVAEKWRKKLETHKEMAFLCRDIARLQTDLHI 240 ++ K + L + + L R + L DL + Sbjct: 237 EISGKKGEALRENIDQVRLNRKVNALVCDLDL 268 >UniRef50_D1J8K1 DNA polymerase I n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J8K1_MYCHP Length = 297 Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 16/207 (7%) Query: 41 QPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSG 100 P + FD ++ +RH+ P YK GR PE + ++ ++ + +G Sbjct: 58 NPKYIYIAFDSHVKT--FRHELFPSYKDGRKKAPESFYLQLDLIQEILTNINIQNQYYNG 115 Query: 101 NEADDLAATLAVKVTQAGHQATIV-STDKGYCQLLSPTLRI--RD----YFQKRWLDAPF 153 EADD+ A KV + TI+ S D+ QL+ I +D +F +L++ Sbjct: 116 FEADDIIA----KVKNKFNLNTIIFSGDQDLNQLIDEQTAIIKKDKTGSFF---FLNSKN 168 Query: 154 IDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK 213 + + P Q+ DY L G +S GV GIGPKSA LL +++++E IY N++ + Sbjct: 169 FSEYYDFLPNQVIDYKALVGDNSDNFKGVVGIGPKSAKTLLDDYKTIENIYNNIEKIKPS 228 Query: 214 WRKKLETHKEMAFLCRDIARLQTDLHI 240 KKL +KE FL + +A L+ D + Sbjct: 229 IAKKLIEYKENTFLDKYLATLRIDFDL 255 >UniRef50_Q1II21 DNA polymerase I n=2 Tax=Acidobacteria RepID=Q1II21_ACIBL Length = 929 Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 2/185 (1%) Query: 66 YKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVS 125 YKA R MPE+L +MP + A +P S G EADD+ TLA K G+ IVS Sbjct: 126 YKANRTEMPEDLTQQMPYIERALNAYRIPMISAEGFEADDVIGTLAKKAADGGYPVYIVS 185 Query: 126 TDKGYCQLLSPTLRIRDYFQKRWL-DAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAG 184 +DK QL++ + I + + + D +++ GV P+++ D L G S VPG G Sbjct: 186 SDKDMMQLVTERVCILNPPKDNLICDPKKVEEILGVPPERVVDVMALRGDSIDNVPGAPG 245 Query: 185 IGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDIARLQTDLHIDGN 243 IG K + QL+ F ++E ++ V +++ R+ L+ +++ + + ++TD+ + Sbjct: 246 IGDKGSVQLIQRFGTVEAALDHAGEVESKRQRESLQQNRDAVLFSKRMVTIRTDIDMPFE 305 Query: 244 LQQLR 248 Q +R Sbjct: 306 PQAMR 310 >UniRef50_D2NTK8 DNA polymerase I n=2 Tax=Rothia mucilaginosa RepID=D2NTK8_9MICC Length = 1003 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/233 (26%), Positives = 110/233 (47%), Gaps = 12/233 (5%) Query: 21 QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDE 80 Q + V L +I +QP+H FD + +R +YK GR +PE + + Sbjct: 42 QHTEAVHAFLSTLLSIIKDNQPSHIAVAFDLPGGT--FRTAEYGEYKGGRNAIPEAFNGQ 99 Query: 81 MPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI 140 + ++ +P + EADD+ ATL + T+AG++ I+S D+ QL++ + + Sbjct: 100 IDLIKKMLGALNIPALTYENYEADDIVATLTRRGTEAGYKVLILSGDRDIFQLVTDDVTL 159 Query: 141 --------RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQ 192 Q+ +D ++K+ V P PD L G + +PGV G+GP A + Sbjct: 160 LYPVTTGPSKGIQR--MDPAAVEKKTKVPPHMYPDLAALTGEQADNLPGVPGVGPGFAAK 217 Query: 193 LLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQ 245 L E+ SL+G+ +N D + K + L + + R + +L DL ++ L+ Sbjct: 218 WLGEYGSLQGVLDNRDKIGGKKGEALRENVDNVVRNRRLNQLVNDLDLNVTLE 270 >UniRef50_A6KZN3 DNA polymerase I n=15 Tax=Bacteroides RepID=A6KZN3_BACV8 Length = 971 Score = 95.9 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 124/259 (47%), Gaps = 17/259 (6%) Query: 5 LLIVDALNLI-RRIHAVQGSPCVET----------CQHALDQLIMHSQPTHAVAVFDDEN 53 L ++DA LI R +A SP + + + L++++ PTH FD Sbjct: 4 LFLLDAYALIYRAYYAFIKSPRINSKGFNTSAVLGFVNTLEEVLKKENPTHIGVAFDPAG 63 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH+ YKA R PE + +P ++ +P G EADD+ TLA + Sbjct: 64 PT--FRHEAYEQYKAQREETPEVIRLSVPIIKDIIRAYRIPILEVPGYEADDVIGTLATE 121 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTL---RIRDYFQKRWLDAPFIDKEFGVQ-PQQLPDYW 169 + G +++ DK Y QL+ + R + + + +F +Q P Q+ D Sbjct: 122 AGKRGITTYMMTPDKDYGQLVGGNVFMYRPKHTGGFEVMGIEEVKAKFDIQSPAQVIDML 181 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 GL G SS +PG G+G K+A +L+ ++ S+E + + + + K+ET+++M + Sbjct: 182 GLMGDSSDNIPGCPGVGEKTAQKLIAQYGSIENLLSHSAELKGALKTKVETNRKMIEFSK 241 Query: 230 DIARLQTDLHIDGNLQQLR 248 +A ++ D+ I N+ +L+ Sbjct: 242 FLATIKIDVPIALNMDELK 260 >UniRef50_D0YSZ1 DNA polymerase I n=6 Tax=Actinobacteridae RepID=D0YSZ1_9ACTO Length = 1040 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 6/228 (2%) Query: 25 CVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPAL 84 V L ++ +PTH A FD S +R PDYK GR P E ++ + Sbjct: 37 AVHGFMSMLLAMLRREKPTHIGAAFDLSRHS--FRTDIYPDYKGGRAETPPEFLGQIENI 94 Query: 85 RAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI---- 140 + + G+ + EADD+ ATLA + G Q + S D+ QL+ + + Sbjct: 95 QRLLDALGIKWLTMENVEADDILATLATQGKAQGMQVLVSSGDRDTFQLIDESTTVLYPG 154 Query: 141 RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSL 200 + Q + + ++GV P Q P+ L G + +PGV +G KSA + ++ L Sbjct: 155 HNAAQTTRMTPQAVKDKYGVWPAQYPEVAALVGEKADNLPGVPLVGEKSAAAWINQYGGL 214 Query: 201 EGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 EGI + + K + L H + R++ RL+TDLH+ L LR Sbjct: 215 EGILAHRGELKGKRGENLRAHVDDVLRNRELNRLRTDLHLPLQLDDLR 262 >UniRef50_C0E901 Putative uncharacterized protein (Fragment) n=2 Tax=Clostridiales RepID=C0E901_9CLOT Length = 890 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 17/258 (6%) Query: 2 AVHLLIVDALNL-------IRRIHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDE 52 A+ +L VD ++ +R + +G P V + +D++I +P FD Sbjct: 40 AMKVLAVDGNSILNRSYYGVRNLSNSKGVPTNAVFGFFNVMDKMIKEVEPDCVAVAFDLS 99 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH++ YKAGR MPEEL ++P + + G G EADD+ T A Sbjct: 100 --APTFRHKQYDGYKAGRKGMPEELAVQLPITKELIQLFGYHIVECEGFEADDIMGTFAR 157 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR--WLDAPFIDKEFGVQPQQLPDYWG 170 + + I + D+ QL+ + +R K D I +E+GV P +L + Sbjct: 158 LCREQKAECVIATGDRDNLQLVGDGVTVRLATNKEAILFDTDKIVQEYGVTPPELIEVKA 217 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYEN---LDAVAE-KWRKKLETHKEMAF 226 L G SS +PGV GIG K+A L+ ++ S+ I ++ LDA K E +E+A Sbjct: 218 LMGDSSDNIPGVKGIGEKTALSLVSKYHSVSYILDHAQELDATTRVKNLLSAEGARELAE 277 Query: 227 LCRDIARLQTDLHIDGNL 244 + R + + + IDG+L Sbjct: 278 MSRMLGTIVDNAPIDGDL 295 >UniRef50_B1HWJ8 Probable 5'-3' exonuclease n=2 Tax=Bacillaceae RepID=B1HWJ8_LYSSC Length = 296 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 76/265 (28%), Positives = 121/265 (45%), Gaps = 26/265 (9%) Query: 5 LLIVDALNLIRR-----------IHAVQGSPCVET---CQHALD-QLIMHSQPTHAVAVF 49 LLIVD + L+ R I G+P +H L Q +M +PTH + Sbjct: 8 LLIVDGMALLFRSFFASAAMGHFIRLADGTPTNGAQGFVRHVLTAQSLM--KPTHMAVCW 65 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +R++ YKA RP PEE+ + + Q G + G EADDL + Sbjct: 66 DMGAHT--FRNELFDGYKANRPAPPEEMLPQFDMAKNLSLQMGWQNFGVKGMEADDLIGS 123 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPF-----IDKEFGVQPQQ 164 + K Q T++S DK QLL P+ I + +K + + +E+ ++P Q Sbjct: 124 MIAK-WQDDADITVISGDKDLLQLLRPSTEIA-FMKKGYTEYDIYTHGRFKEEYSIEPAQ 181 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 G +S PGV GIGPK A L+ + S++ + +L + R K++ +M Sbjct: 182 FAQVKAFMGDTSDGYPGVKGIGPKQALTLIQTYGSIDSVLASLGELKPGQRTKIQDQIDM 241 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 L ++A +QTD+ I+ +L L L Sbjct: 242 LKLSHELATIQTDVPIEADLSSLVL 266 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B7LVW5 Uncharacterized exonuclease xni n=98 Tax=Enterob... 362 6e-99 UniRef50_A1ASW3 DNA polymerase I n=12 Tax=Deltaproteobacteria Re... 341 9e-93 UniRef50_B9M4P2 DNA polymerase I n=3 Tax=Deltaproteobacteria Rep... 340 3e-92 UniRef50_A6FZM5 DNA polymerase I n=2 Tax=Deltaproteobacteria Rep... 330 4e-89 UniRef50_Q04957 DNA polymerase I n=117 Tax=Firmicutes RepID=DPO1... 328 2e-88 UniRef50_B8D217 DNA polymerase I n=1 Tax=Halothermothrix orenii ... 327 2e-88 UniRef50_Q2LQV1 DNA polymerase I n=1 Tax=Syntrophus aciditrophic... 324 1e-87 UniRef50_A5GAH5 Ribonuclease H n=6 Tax=Desulfuromonadales RepID=... 323 3e-87 UniRef50_C8W0H1 DNA polymerase I n=2 Tax=Clostridia RepID=C8W0H1... 323 5e-87 UniRef50_Q0AVE2 DNA polymerase I n=1 Tax=Syntrophomonas wolfei s... 322 6e-87 UniRef50_B0KAJ0 DNA polymerase I n=12 Tax=Thermoanaerobacterales... 321 9e-87 UniRef50_B6IUP1 DNA polymerase I, putative n=2 Tax=Alphaproteoba... 321 1e-86 UniRef50_B3TC83 Putative DNA polymerase family A n=1 Tax=uncultu... 321 2e-86 UniRef50_A0LCQ8 DNA polymerase I n=1 Tax=Magnetococcus sp. MC-1 ... 319 5e-86 UniRef50_D0XR83 DNA polymerase I n=2 Tax=Alphaproteobacteria Rep... 319 6e-86 UniRef50_Q6MPP6 DNA polymerase I n=1 Tax=Bdellovibrio bacteriovo... 319 6e-86 UniRef50_Q6X9S0 DNA polymerase I n=3 Tax=Bacillales RepID=Q6X9S0... 319 6e-86 UniRef50_Q59156 DNA polymerase I n=6 Tax=Clostridia RepID=DPO1_A... 318 9e-86 UniRef50_Q6X9Q9 DNA polymerase I n=1 Tax=Spirochaeta thermophila... 317 3e-85 UniRef50_C4Z982 DNA polymerase I n=2 Tax=Clostridiales RepID=C4Z... 316 5e-85 UniRef50_A7HP95 DNA polymerase I n=11 Tax=Alphaproteobacteria Re... 315 8e-85 UniRef50_A0PZF5 DNA polymerase I n=27 Tax=Clostridia RepID=A0PZF... 315 9e-85 UniRef50_C8PRX0 DNA polymerase I n=1 Tax=Treponema vincentii ATC... 315 1e-84 UniRef50_B6R626 DNA polymerase I superfamily protein n=1 Tax=Pse... 315 1e-84 UniRef50_Q1QDQ1 DNA polymerase I n=24 Tax=cellular organisms Rep... 314 2e-84 UniRef50_Q3ABL3 DNA polymerase I n=1 Tax=Carboxydothermus hydrog... 314 2e-84 UniRef50_Q1RH76 DNA polymerase I n=18 Tax=Rickettsia RepID=DPO1_... 314 2e-84 UniRef50_Q0F0N6 DNA polymerase I n=1 Tax=Mariprofundus ferrooxyd... 314 2e-84 UniRef50_A5WH47 DNA polymerase I n=4 Tax=Bacteria RepID=A5WH47_P... 313 2e-84 UniRef50_B9KYZ1 DNA polymerase I n=4 Tax=Thermomicrobia (class) ... 313 3e-84 UniRef50_C7MNN5 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID... 313 4e-84 UniRef50_Q9S1G2 DNA polymerase I n=25 Tax=Rhizobiales RepID=DPO1... 312 7e-84 UniRef50_B8H5J7 DNA polymerase I n=23 Tax=Alphaproteobacteria Re... 312 8e-84 UniRef50_Q9RAA9 DNA polymerase I n=2 Tax=spotted fever group Rep... 312 8e-84 UniRef50_A4YLA1 DNA polymerase I (POL I) n=63 Tax=cellular organ... 311 1e-83 UniRef50_Q9F173 DNA polymerase I n=177 Tax=Proteobacteria RepID=... 311 1e-83 UniRef50_P43741 DNA polymerase I n=222 Tax=cellular organisms Re... 310 2e-83 UniRef50_O34996 DNA polymerase I n=38 Tax=Bacteria RepID=DPO1_BACSU 310 3e-83 UniRef50_Q1NVM3 DNA polymerase A n=2 Tax=Deltaproteobacteria Rep... 310 3e-83 UniRef50_A9H4T5 DNA polymerase I n=43 Tax=Alphaproteobacteria Re... 310 3e-83 UniRef50_D1PTJ0 DNA-directed DNA polymerase I (Fragment) n=1 Tax... 309 5e-83 UniRef50_B2RLP5 DNA polymerase I n=2 Tax=Porphyromonas gingivali... 309 6e-83 UniRef50_C9LLQ0 DNA polymerase I n=1 Tax=Dialister invisus DSM 1... 309 6e-83 UniRef50_C1A095 DNA polymerase I n=60 Tax=Actinomycetales RepID=... 309 6e-83 UniRef50_Q1V0V5 DNA polymerase I n=3 Tax=Candidatus Pelagibacter... 309 6e-83 UniRef50_A6TSU6 DNA polymerase I n=13 Tax=Clostridiaceae RepID=A... 309 7e-83 UniRef50_A0LIP7 DNA polymerase I n=1 Tax=Syntrophobacter fumarox... 308 9e-83 UniRef50_B0VJ17 DNA polymerase I n=1 Tax=Candidatus Cloacamonas ... 308 1e-82 UniRef50_A5CDT3 DNA polymerase I n=2 Tax=Orientia tsutsugamushi ... 307 2e-82 UniRef50_D1BM52 DNA polymerase I n=6 Tax=Veillonellaceae RepID=D... 307 2e-82 UniRef50_C6XHK7 DNA polymerase I n=1 Tax=Candidatus Liberibacter... 307 3e-82 UniRef50_UPI0001744922 DNA polymerase I n=1 Tax=Verrucomicrobium... 306 3e-82 UniRef50_C1XI40 DNA polymerase I n=24 Tax=Bacteria RepID=C1XI40_... 306 4e-82 UniRef50_C3U0N1 Truncated DNA polymerase I n=1 Tax=uncultured ba... 306 6e-82 UniRef50_B1YKA1 DNA polymerase I n=3 Tax=Bacilli RepID=B1YKA1_EXIS2 305 7e-82 UniRef50_B1C859 DNA polymerase I n=1 Tax=Anaerofustis stercoriho... 305 9e-82 UniRef50_B2V602 5'-3' exonuclease n=4 Tax=Hydrogenothermaceae Re... 304 1e-81 UniRef50_A6KZN3 DNA polymerase I n=15 Tax=Bacteroides RepID=A6KZ... 304 1e-81 UniRef50_D1CFH6 DNA polymerase I n=1 Tax=Thermobaculum terrenum ... 304 2e-81 UniRef50_A6G5W6 DNA polymerase I n=2 Tax=cellular organisms RepI... 303 3e-81 UniRef50_B2UNN5 DNA polymerase I n=1 Tax=Akkermansia muciniphila... 303 3e-81 UniRef50_A6NVK8 DNA polymerase I n=2 Tax=Bacteria RepID=A6NVK8_9... 303 3e-81 UniRef50_D0L9T3 DNA polymerase I n=2 Tax=Corynebacterineae RepID... 303 3e-81 UniRef50_A6CAX6 DNA polymerase I n=2 Tax=Planctomycetaceae RepID... 303 4e-81 UniRef50_C4LIB4 DNA polymerase I n=1 Tax=Corynebacterium kroppen... 303 4e-81 UniRef50_B0TER6 DNA polymerase i n=2 Tax=Heliobacteriaceae RepID... 303 4e-81 UniRef50_Q2GBP7 DNA polymerase I n=10 Tax=Alphaproteobacteria Re... 303 5e-81 UniRef50_D2RIE4 DNA polymerase I n=5 Tax=Clostridiales RepID=D2R... 303 5e-81 UniRef50_B2TNM6 DNA polymerase I n=7 Tax=Clostridiales RepID=B2T... 303 5e-81 UniRef50_C3J9S9 DNA polymerase type I n=2 Tax=Bacteria RepID=C3J... 302 7e-81 UniRef50_Q3Z6P9 DNA-directed DNA polymerase I n=5 Tax=Dehalococc... 301 1e-80 UniRef50_C7GEY2 DNA polymerase I n=6 Tax=Clostridiales RepID=C7G... 301 1e-80 UniRef50_D0WFK8 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID... 301 2e-80 UniRef50_Q2S226 DNA polymerase I n=4 Tax=Rhodothermaceae RepID=Q... 300 2e-80 UniRef50_B8FU82 DNA polymerase I n=2 Tax=Desulfitobacterium hafn... 300 2e-80 UniRef50_Q21YU4 DNA polymerase I n=39 Tax=Betaproteobacteria Rep... 300 3e-80 UniRef50_Q02DA6 DNA polymerase I n=1 Tax=Candidatus Solibacter u... 300 3e-80 UniRef50_Q65W28 PolA protein n=42 Tax=Bacteria RepID=Q65W28_MANSM 300 3e-80 UniRef50_Q1PUU8 Stongly similair to DNA polymerase I n=1 Tax=Can... 300 3e-80 UniRef50_B1GZ14 DNA polymerase I n=1 Tax=uncultured Termite grou... 299 4e-80 UniRef50_P52028 DNA polymerase I, thermostable n=18 Tax=Bacteria... 299 5e-80 UniRef50_Q2RHE8 DNA polymerase I n=4 Tax=Clostridia RepID=Q2RHE8... 299 7e-80 UniRef50_A7NJD5 DNA polymerase I n=2 Tax=Roseiflexus RepID=A7NJD... 299 7e-80 UniRef50_D0YSZ1 DNA polymerase I n=6 Tax=Actinobacteridae RepID=... 298 1e-79 UniRef50_D2QFD0 DNA polymerase I n=3 Tax=Bacteria RepID=D2QFD0_9... 298 1e-79 UniRef50_UPI0001976BF8 DNA polymerase I n=1 Tax=Bifidobacterium ... 298 1e-79 UniRef50_Q4JW27 DNA polymerase I n=2 Tax=Corynebacterium jeikeiu... 298 1e-79 UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkalip... 298 1e-79 UniRef50_B1BYY4 DNA polymerase I n=4 Tax=Bacteria RepID=B1BYY4_9... 298 2e-79 UniRef50_A9NF42 DNA polymerase I n=1 Tax=Acholeplasma laidlawii ... 298 2e-79 UniRef50_C8NZ98 DNA polymerase I n=1 Tax=Erysipelothrix rhusiopa... 297 2e-79 UniRef50_C4Z0G0 DNA polymerase I n=23 Tax=Bacteria RepID=C4Z0G0_... 297 2e-79 UniRef50_B0PCZ2 DNA polymerase I n=3 Tax=Clostridiales RepID=B0P... 297 2e-79 UniRef50_C0X9C1 Possible DNA polymerase I (Fragment) n=1 Tax=Ent... 296 3e-79 UniRef50_C5CBM1 DNA polymerase I n=2 Tax=Micrococcus luteus NCTC... 296 3e-79 UniRef50_C4FFL7 Putative uncharacterized protein n=2 Tax=Bifidob... 296 3e-79 UniRef50_Q2JCJ5 DNA polymerase I n=10 Tax=Actinomycetales RepID=... 296 3e-79 UniRef50_C7HT94 DNA polymerase I n=1 Tax=Anaerococcus vaginalis ... 296 5e-79 UniRef50_P59200 DNA polymerase I n=187 Tax=Firmicutes RepID=DPO1... 296 6e-79 UniRef50_Q1JIU7 DNA polymerase I n=14 Tax=Streptococcus RepID=Q1... 296 6e-79 UniRef50_A9ITV6 DNA polymerase I n=89 Tax=Proteobacteria RepID=A... 296 6e-79 UniRef50_A8R8A1 DNA polymerase I n=2 Tax=unclassified Erysipelot... 296 7e-79 UniRef50_B0S404 DNA polymerase I n=2 Tax=Finegoldia magna RepID=... 295 7e-79 UniRef50_B1WPN5 DNA polymerase I n=13 Tax=Bacteria RepID=B1WPN5_... 295 7e-79 UniRef50_O67550 5'-3' exonuclease n=2 Tax=Aquificaceae RepID=EX5... 295 1e-78 UniRef50_Q1D7R1 DNA polymerase I n=4 Tax=Myxococcaceae RepID=Q1D... 295 1e-78 UniRef50_B8I3Y7 DNA polymerase I n=6 Tax=Clostridium RepID=B8I3Y... 294 1e-78 UniRef50_C2MBR8 DNA polymerase type I n=1 Tax=Porphyromonas ueno... 294 1e-78 UniRef50_C6W4A8 DNA polymerase I n=44 Tax=Bacteria RepID=C6W4A8_... 294 1e-78 UniRef50_O08307 DNA polymerase I n=4 Tax=Chloroflexi (class) Rep... 294 2e-78 UniRef50_B5YG86 DNA polymerase I n=1 Tax=Thermodesulfovibrio yel... 294 2e-78 UniRef50_A8USN7 DNA polymerase I 3'-5' exo domain n=1 Tax=Hydrog... 294 2e-78 UniRef50_C2BWF0 DNA-directed DNA polymerase n=1 Tax=Mobiluncus c... 293 3e-78 UniRef50_Q5HCC8 DNA polymerase I n=14 Tax=Rickettsiales RepID=Q5... 293 3e-78 UniRef50_D2RAL7 DNA-directed DNA polymerase n=2 Tax=Gardnerella ... 293 4e-78 UniRef50_Q11NX3 DNA polymerase I n=11 Tax=Bacteria RepID=Q11NX3_... 293 4e-78 UniRef50_C0E6N1 Putative uncharacterized protein n=1 Tax=Coryneb... 293 4e-78 UniRef50_B6G9J6 Putative uncharacterized protein n=2 Tax=Collins... 293 5e-78 UniRef50_C6CWL9 5'-3' exonuclease n=3 Tax=Bacillales RepID=C6CWL... 293 5e-78 UniRef50_Q1AUF6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilu... 293 5e-78 UniRef50_B0MYJ0 Putative uncharacterized protein n=1 Tax=Alistip... 292 7e-78 UniRef50_B4U0B7 DNA polymerase I n=5 Tax=Streptococcus RepID=B4U... 292 8e-78 UniRef50_B0MR22 DNA polymerase I n=1 Tax=Eubacterium siraeum DSM... 292 9e-78 UniRef50_A8SN89 DNA polymerase I n=2 Tax=Clostridiales Family XI... 292 9e-78 UniRef50_Q2GI23 DNA polymerase I n=6 Tax=Rickettsiales RepID=Q2G... 291 1e-77 UniRef50_B8DUU4 DNA polymerase I n=16 Tax=Bifidobacterium RepID=... 291 1e-77 UniRef50_D1VS49 DNA polymerase I n=1 Tax=Peptoniphilus lacrimali... 291 1e-77 UniRef50_D1Y4U0 DNA polymerase I n=1 Tax=Pyramidobacter piscolen... 291 2e-77 UniRef50_A0JWM3 DNA polymerase I n=7 Tax=Actinobacteria (class) ... 291 2e-77 UniRef50_P46835 DNA polymerase I n=51 Tax=Actinobacteridae RepID... 290 2e-77 UniRef50_A7HD60 DNA polymerase I n=2 Tax=Cystobacterineae RepID=... 290 3e-77 UniRef50_Q252Y8 DNA polymerase I n=14 Tax=Chlamydiaceae RepID=Q2... 290 3e-77 UniRef50_P74933 DNA polymerase I n=3 Tax=Bacteria RepID=DPO1_TREPA 289 4e-77 UniRef50_B6YQQ9 DNA polymerase I n=13 Tax=Bacteroidales RepID=B6... 289 4e-77 UniRef50_C8W7U1 DNA polymerase I n=3 Tax=Coriobacteriaceae RepID... 289 4e-77 UniRef50_C0ZE02 Putative 5'-3' exonuclease n=1 Tax=Brevibacillus... 289 5e-77 UniRef50_C2D755 DNA-directed DNA polymerase n=1 Tax=Atopobium va... 289 5e-77 UniRef50_Q2GD93 DNA polymerase I n=2 Tax=Neorickettsia RepID=Q2G... 289 7e-77 UniRef50_C0QYF7 DNA polymerase I n=3 Tax=Brachyspira RepID=C0QYF... 289 8e-77 UniRef50_B2GGW1 DNA polymerase I n=1 Tax=Kocuria rhizophila DC22... 288 8e-77 UniRef50_C7GZ50 DNA polymerase I n=1 Tax=Eubacterium saphenum AT... 288 2e-76 UniRef50_B9Y7P1 DNA polymerase I n=2 Tax=Erysipelotrichaceae Rep... 287 2e-76 UniRef50_D0RQG2 DNA polymerase I n=1 Tax=alpha proteobacterium H... 287 2e-76 UniRef50_C1ZLA6 DNA polymerase I n=1 Tax=Planctomyces limnophilu... 287 2e-76 UniRef50_C7H3Z2 DNA polymerase I n=2 Tax=Ruminococcaceae RepID=C... 287 2e-76 UniRef50_B9L837 DNA polymerase I n=2 Tax=Nautiliaceae RepID=B9L8... 287 2e-76 UniRef50_D0LQ66 DNA polymerase I n=1 Tax=Haliangium ochraceum DS... 287 3e-76 UniRef50_Q55971 DNA polymerase I n=13 Tax=Cyanobacteria RepID=DP... 286 5e-76 UniRef50_Q73M72 DNA polymerase I n=1 Tax=Treponema denticola Rep... 286 7e-76 UniRef50_Q2JPZ4 DNA polymerase I n=3 Tax=Cyanobacteria RepID=Q2J... 285 8e-76 UniRef50_Q04G12 DNA polymerase I n=28 Tax=Lactobacillales RepID=... 285 1e-75 UniRef50_A9G0B1 DNA polymerase I n=3 Tax=Sorangium cellulosum 'S... 285 1e-75 UniRef50_A6DML3 DNA-directed DNA polymerase, DNA polimerase I pr... 284 1e-75 UniRef50_Q14QK7 DNA polymerase I n=1 Tax=Spiroplasma citri RepID... 284 1e-75 UniRef50_Q7UI29 DNA polymerase I n=1 Tax=Rhodopirellula baltica ... 284 1e-75 UniRef50_D1AJI6 DNA polymerase I n=2 Tax=Fusobacteriaceae RepID=... 284 2e-75 UniRef50_UPI00016BFC66 DNA polymerase I n=1 Tax=Epulopiscium sp.... 284 2e-75 UniRef50_B5FAT7 Uncharacterized exonuclease xni n=138 Tax=Gammap... 284 2e-75 UniRef50_D2R075 DNA polymerase I n=1 Tax=Pirellula staleyi DSM 6... 284 3e-75 UniRef50_Q7WZP8 DNA polymerase type I n=2 Tax=unclassified Bacte... 283 3e-75 UniRef50_C5CIW2 DNA polymerase I n=1 Tax=Kosmotoga olearia TBF 1... 283 4e-75 UniRef50_A5EWG4 DNA polymerase I n=10 Tax=Gammaproteobacteria Re... 282 8e-75 UniRef50_Q4L6E6 Similar to 5&apos n=2 Tax=Staphylococcus RepID=Q... 282 1e-74 UniRef50_B4S5F3 DNA polymerase I n=12 Tax=Chlorobiaceae RepID=B4... 281 1e-74 UniRef50_C4GAN0 Putative uncharacterized protein n=1 Tax=Shuttle... 281 1e-74 UniRef50_A0KHE3 Uncharacterized exonuclease xni n=3 Tax=Aeromona... 281 1e-74 UniRef50_B9YEU0 DNA polymerase I n=2 Tax=Cyanobacteria RepID=B9Y... 281 2e-74 UniRef50_C0E901 Putative uncharacterized protein (Fragment) n=2 ... 280 3e-74 UniRef50_C9RNE9 DNA polymerase I n=1 Tax=Fibrobacter succinogene... 280 3e-74 UniRef50_C1TPP4 DNA polymerase I n=2 Tax=Synergistaceae RepID=C1... 280 3e-74 UniRef50_C5B5N3 DNA polymerase I n=1 Tax=Methylobacterium extorq... 279 4e-74 UniRef50_Q8NWQ2 MW1329 protein n=63 Tax=Staphylococcaceae RepID=... 279 7e-74 UniRef50_A7HJZ2 DNA polymerase I n=11 Tax=Bacteria RepID=A7HJZ2_... 278 1e-73 UniRef50_A9BEU8 DNA polymerase I n=1 Tax=Petrotoga mobilis SJ95 ... 278 2e-73 UniRef50_UPI0001C17162 DNA polymerase A n=2 Tax=Nostocaceae RepI... 277 2e-73 UniRef50_C9Y9S8 Putative uncharacterized protein n=1 Tax=Curviba... 277 2e-73 UniRef50_UPI0001C32326 DNA polymerase I n=1 Tax=Conexibacter woe... 277 3e-73 UniRef50_Q9HT80 DNA polymerase I n=9 Tax=Gammaproteobacteria Rep... 277 3e-73 UniRef50_Q118S8 DNA polymerase I n=4 Tax=Cyanobacteria RepID=Q11... 277 3e-73 UniRef50_B1VB35 DNA polymerase I n=1 Tax=Candidatus Phytoplasma ... 276 4e-73 UniRef50_A1SYB8 Uncharacterized exonuclease xni n=2 Tax=Psychrom... 276 4e-73 UniRef50_B7FRK5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 276 4e-73 UniRef50_D1R879 Putative uncharacterized protein n=1 Tax=Parachl... 276 5e-73 UniRef50_B0KVB0 Putative 5'-3' exonuclease n=1 Tax=uncultured ca... 276 6e-73 UniRef50_C5RBK8 DNA polymerase I n=9 Tax=Lactobacillales RepID=C... 276 6e-73 UniRef50_Q6KHF6 DNA polymerase I n=1 Tax=Mycoplasma mobile RepID... 276 7e-73 UniRef50_A3EQ00 DNA polymerase I n=3 Tax=Leptospirillum RepID=A3... 275 8e-73 UniRef50_Q1N615 Exonuclease IX n=1 Tax=Bermanella marisrubri Rep... 275 9e-73 UniRef50_D1AZX7 DNA polymerase I n=3 Tax=Campylobacterales RepID... 274 1e-72 UniRef50_Q67KY2 DNA polymerase I n=1 Tax=Symbiobacterium thermop... 274 2e-72 UniRef50_Q1LTX9 DNA polymerase I n=1 Tax=Baumannia cicadellinico... 274 2e-72 UniRef50_A0RC28 5'-3' exonuclease n=75 Tax=Bacillus RepID=A0RC28... 274 2e-72 UniRef50_B0SCM1 DNA-directed DNA polymerase n=2 Tax=Leptospira b... 274 2e-72 UniRef50_B5RMA2 DNA polymerase I n=2 Tax=Borrelia RepID=B5RMA2_B... 274 2e-72 UniRef50_A1QZY0 DNA polymerase I n=1 Tax=Borrelia turicatae 91E1... 274 3e-72 UniRef50_C7RDU0 DNA polymerase I n=3 Tax=Anaerococcus RepID=C7RD... 273 3e-72 UniRef50_Q6MEQ2 Probable DNA polymerase I n=1 Tax=Candidatus Pro... 273 3e-72 UniRef50_Q1II21 DNA polymerase I n=2 Tax=Acidobacteria RepID=Q1I... 273 4e-72 UniRef50_Q2SRK9 DNA polymerase I n=4 Tax=Mollicutes RepID=Q2SRK9... 273 6e-72 UniRef50_Q7VRJ4 DNA polymerase I n=3 Tax=Enterobacteriaceae RepI... 272 8e-72 UniRef50_UPI0001BC5C75 DNA polymerase I n=3 Tax=Fusobacterium Re... 272 8e-72 UniRef50_Q30VQ3 DNA polymerase I n=7 Tax=Desulfovibrionales RepI... 271 1e-71 UniRef50_A6VZB4 5'-3' exonuclease n=2 Tax=Marinomonas RepID=A6VZ... 271 1e-71 UniRef50_Q30R59 DNA polymerase A n=6 Tax=Epsilonproteobacteria R... 271 1e-71 UniRef50_P52027 DNA polymerase I n=4 Tax=Deinococci RepID=DPO1_D... 271 2e-71 UniRef50_Q04Q27 DNA-directed DNA polymerase n=4 Tax=Leptospira R... 271 2e-71 UniRef50_Q83GI7 DNA polymerase I n=2 Tax=Tropheryma whipplei Rep... 270 3e-71 UniRef50_C1A3H5 DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca... 270 4e-71 UniRef50_B2IJU1 DNA polymerase I n=25 Tax=cellular organisms Rep... 269 4e-71 UniRef50_D2NTK8 DNA polymerase I n=2 Tax=Rothia mucilaginosa Rep... 269 5e-71 UniRef50_C7LZ56 DNA polymerase I n=1 Tax=Acidimicrobium ferrooxi... 269 6e-71 UniRef50_Q47YA8 Uncharacterized exonuclease xni n=1 Tax=Colwelli... 268 1e-70 UniRef50_C3U0N4 DNA polymerase I n=1 Tax=uncultured bacterium Re... 268 1e-70 UniRef50_A8FKC7 DNA polymerase I n=20 Tax=Campylobacter RepID=A8... 268 1e-70 UniRef50_D1B5M0 DNA polymerase I n=1 Tax=Thermanaerovibrio acida... 267 2e-70 UniRef50_A2SN70 DNA polymerase I n=1 Tax=Methylibium petroleiphi... 267 2e-70 UniRef50_C8PHS8 DNA polymerase I n=2 Tax=Campylobacter RepID=C8P... 267 2e-70 UniRef50_A7ILD7 5'-3' exonuclease n=1 Tax=Xanthobacter autotroph... 267 3e-70 UniRef50_A5CXW1 DNA polymerase I n=2 Tax=sulfur-oxidizing symbio... 267 3e-70 UniRef50_UPI0000DAED41 hypothetical protein Wendoof_01000149 n=1... 266 5e-70 UniRef50_P54161 5'-3' exonuclease n=31 Tax=Bacillales RepID=EX53... 266 6e-70 UniRef50_O51498 DNA polymerase I n=20 Tax=Borrelia RepID=DPO1_BORBU 266 6e-70 UniRef50_A5IXV4 DNA polymerase I: 5' 3' exonuclease domain n=7 T... 266 6e-70 UniRef50_B6WQX5 Putative uncharacterized protein n=1 Tax=Desulfo... 265 8e-70 UniRef50_Q2NK60 DNA polymerase I n=5 Tax=Candidatus Phytoplasma ... 265 1e-69 UniRef50_B3PMZ8 5'-3' exonuclease, exo domain of DNA polymerase ... 265 1e-69 UniRef50_B3DZC7 5'-3' exonuclease n=1 Tax=Methylacidiphilum infe... 264 1e-69 UniRef50_B2A646 DNA polymerase I n=1 Tax=Natranaerobius thermoph... 264 2e-69 UniRef50_Q72ES3 DNA polymerase I n=3 Tax=Desulfovibrio vulgaris ... 264 2e-69 UniRef50_C3XEZ4 DNA polymerase I n=3 Tax=Bacteria RepID=C3XEZ4_9... 263 3e-69 UniRef50_A5TW64 DNA-directed DNA polymerase I n=10 Tax=Fusobacte... 263 3e-69 UniRef50_A4Y4Y4 Uncharacterized exonuclease xni n=21 Tax=Shewane... 263 6e-69 UniRef50_C6C0R6 DNA polymerase I n=3 Tax=Desulfovibrio RepID=C6C... 262 7e-69 UniRef50_Q21SR9 5'-3' exonuclease n=1 Tax=Rhodoferax ferrireduce... 262 9e-69 UniRef50_C5BR48 5'-3' exonuclease n=1 Tax=Teredinibacter turnera... 262 9e-69 UniRef50_C3WHF0 DNA polymerase I n=3 Tax=Fusobacterium RepID=C3W... 260 3e-68 UniRef50_Q8K9D0 5'-3' exonuclease n=4 Tax=Buchnera aphidicola Re... 260 4e-68 UniRef50_UPI0001978038 DNA polymerase I n=1 Tax=Helicobacter cin... 259 4e-68 UniRef50_Q4UR88 Exodeoxyribonuclease IX n=14 Tax=Bacteria RepID=... 259 5e-68 UniRef50_B8IZN9 DNA polymerase I n=1 Tax=Desulfovibrio desulfuri... 258 1e-67 UniRef50_B2KCD2 DNA polymerase I n=1 Tax=Elusimicrobium minutum ... 257 2e-67 UniRef50_C1SHV2 DNA polymerase I n=1 Tax=Denitrovibrio acetiphil... 257 3e-67 UniRef50_B5JW38 Exodeoxyribonuclease IX n=1 Tax=gamma proteobact... 256 6e-67 UniRef50_C7N982 DNA polymerase I n=6 Tax=Leptotrichia RepID=C7N9... 255 9e-67 UniRef50_D0KVP7 5'-3' exonuclease, N-terminal resolvase-like dom... 254 1e-66 UniRef50_Q3ICC5 Uncharacterized exonuclease xni n=3 Tax=Alteromo... 254 3e-66 UniRef50_A8MQG8 Uncharacterized protein At3g52050.3 n=15 Tax=Mag... 252 7e-66 UniRef50_Q89AD1 5'-3' exonuclease n=1 Tax=Buchnera aphidicola (B... 252 8e-66 UniRef50_A6SUA5 5'-3' exonuclease n=3 Tax=cellular organisms Rep... 252 9e-66 UniRef50_B1HWJ8 Probable 5'-3' exonuclease n=2 Tax=Bacillaceae R... 251 1e-65 Sequences not found previously or not previously below threshold: >UniRef50_B7LVW5 Uncharacterized exonuclease xni n=98 Tax=Enterobacteriaceae RepID=XNI_ESCF3 Length = 251 Score = 362 bits (931), Expect = 6e-99, Method: Composition-based stats. Identities = 241/251 (96%), Positives = 246/251 (98%) Query: 1 MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRH 60 MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTH VAVFDDENR+SGWRH Sbjct: 1 MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHVVAVFDDENRNSGWRH 60 Query: 61 QRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQ 120 QRLPDYKAGRPPMP+ELH+EMP LRAAFEQRGVPCWS +GNEADDLAATLAVKVTQAGHQ Sbjct: 61 QRLPDYKAGRPPMPDELHNEMPTLRAAFEQRGVPCWSATGNEADDLAATLAVKVTQAGHQ 120 Query: 121 ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVP 180 ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVP Sbjct: 121 ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVP 180 Query: 181 GVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHI 240 GVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLE HKEMAFLCRDIARLQTD+HI Sbjct: 181 GVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLEMHKEMAFLCRDIARLQTDVHI 240 Query: 241 DGNLQQLRLVR 251 DGNLQQLRL R Sbjct: 241 DGNLQQLRLKR 251 >UniRef50_A1ASW3 DNA polymerase I n=12 Tax=Deltaproteobacteria RepID=A1ASW3_PELPD Length = 893 Score = 341 bits (877), Expect = 9e-93, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 125/255 (49%), Gaps = 11/255 (4%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L +VD + I R + + + L +L+ QP H VFD Sbjct: 4 DDTLYLVDGSSYIYRAYYAIRHLSSPTGHPTNTIYGFTQMLLKLLKEHQPRHVAVVFDVG 63 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +R + PDYKA R +P++L +M +R +P +G EADD+ LA Sbjct: 64 R--ETFRTELYPDYKANRAALPDDLRVQMGPIRDLVRAFNIPALELAGFEADDIIGCLAA 121 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 + + G + IV+ DK Q+++ + + D +++ + + FGV+P+ + D GLA Sbjct: 122 RFSATGGRVVIVTGDKDLMQIVTERVTLLDTMKEKRSAITDVIERFGVEPRLVTDILGLA 181 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIA 232 G +S +PGV GIG K+A +L+ E+ SL+ + E V K +KL ++ A L R +A Sbjct: 182 GDASDNIPGVPGIGEKTAMKLIREYGSLDQLLERASEVKGKNGEKLREFRDQALLSRRLA 241 Query: 233 RLQTDLHIDGNLQQL 247 ++ D+ I L++L Sbjct: 242 TIRCDVPIQVELEEL 256 >UniRef50_B9M4P2 DNA polymerase I n=3 Tax=Deltaproteobacteria RepID=B9M4P2_GEOSF Length = 891 Score = 340 bits (873), Expect = 3e-92, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 121/255 (47%), Gaps = 11/255 (4%) Query: 2 AVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L ++D + I R + + + L +++ +P H VFD Sbjct: 4 KPKLYLIDGSSYIYRAYYAIRHLSSPKGFPTNALYGFIQMLLKVVKDRKPDHLAVVFDAG 63 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R++ P YKA R MP++L ++ ++ A +P G EADD+ T+A Sbjct: 64 KLT--FRNEIYPAYKANRSAMPDDLRLQIEPIKEAVRAFRIPVLELPGFEADDIIGTIAC 121 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 + G A IV+ DK Q+++ ++ + D + + + + FGV P+++ D LA Sbjct: 122 DCEKKGMAAVIVTGDKDLMQIVTDSVTLLDTMKDKASGPAEVVERFGVPPERVVDILALA 181 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIA 232 G SS +PG+ GIG K+A +L+ E SL+ + EN V K ++L + A L R +A Sbjct: 182 GDSSDNIPGIPGIGEKTAIKLIQEHHSLDQLLENASVVKGKVGERLREFADQARLSRRLA 241 Query: 233 RLQTDLHIDGNLQQL 247 ++ ++ + + Sbjct: 242 TIECNVPVPYSYGDF 256 >UniRef50_A6FZM5 DNA polymerase I n=2 Tax=Deltaproteobacteria RepID=A6FZM5_9DELT Length = 898 Score = 330 bits (846), Expect = 4e-89, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 130/259 (50%), Gaps = 12/259 (4%) Query: 2 AVHLLIVDALNLIRRIHAVQ----------GSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 L+++DA +LI R + + + +++ QP VFD Sbjct: 4 PERLILIDASSLIYRAYYAIPANFSTADGLHTNAIYGFATMFRKILSGRQPERGAVVFDA 63 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ +R ++ P+YKA RP M EL +++P + E P G EADD+ TL Sbjct: 64 PGKT--FREEQYPEYKAQRPRMDPELREQLPWVDKLVEAHRFPHLRVPGYEADDIIGTLT 121 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + AG + I+S DK + QL+ PT+R+ D + DA + K++GV P DY L Sbjct: 122 RQAVDAGMEVYIISGDKDFAQLIGPTVRMIDTLRDVTFDAELVRKKWGVPPSLFIDYLAL 181 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G +PGV GIGPK+A +LL + LEG+ + + K +++LE + E A + + + Sbjct: 182 VGDKVDNIPGVPGIGPKTAKKLLDAYGDLEGVLTHTSELKGKQKERLEDNAEQARMSQKL 241 Query: 232 ARLQTDLHIDGNLQQLRLV 250 A + T + ++ L+ L+LV Sbjct: 242 ATIDTQVELELGLEDLKLV 260 >UniRef50_Q04957 DNA polymerase I n=117 Tax=Firmicutes RepID=DPO1_BACCA Length = 877 Score = 328 bits (841), Expect = 2e-88, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 131/261 (50%), Gaps = 16/261 (6%) Query: 1 MAVHLLIVDALNLIRR-------IHAVQG--SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L+++D ++ R +H +G + V L++++ +PTH + FD Sbjct: 1 MKKKLVLIDGSSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEEPTHMLVAFDA 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH+ +YK GR P EL ++ P LR +P + EADD+ TLA Sbjct: 61 GK--TTFRHEAFQEYKGGRQQTPPELSEQFPLLRELLRAYRIPAYELENYEADDIIGTLA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 + Q G + ++S D+ QL SP + + + + +++G+ P+Q+ D Sbjct: 119 ARAEQEGFEVKVISGDRDLTQLASPHVTVDITKKGITDIEPYTPEAVREKYGLTPEQIVD 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAF 226 GL G S +PGV GIG K+A +LL +F ++E + ++D + K ++ L H+EMA Sbjct: 179 LKGLMGDKSDNIPGVPGIGEKTAVKLLRQFGTVENVLASIDEIKGEKLKETLRQHREMAL 238 Query: 227 LCRDIARLQTDLHIDGNLQQL 247 L + +A ++ D ++ +L + Sbjct: 239 LSKKLAAIRRDAPVELSLDDI 259 >UniRef50_B8D217 DNA polymerase I n=1 Tax=Halothermothrix orenii H 168 RepID=B8D217_HALOH Length = 870 Score = 327 bits (839), Expect = 2e-88, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 128/265 (48%), Gaps = 16/265 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L ++D +L R + V L +L+ +P FD Sbjct: 1 MKKKLYLLDGQSLAHRAFYALPLLSTSRGEYTNAVFGFTRMLLKLLDEEKPDLIAVAFD- 59 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ +RH+ +YKA R MPEEL ++ ++ + +P G EADD+ T+A Sbjct: 60 -KKAPTFRHKEYKEYKAHRKKMPEELKPQLSLIKEVLKSFSIPIIEIEGFEADDIIGTMA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPD 167 K + G + IV+ D+ QL++ + + R D + + + ++PQQL D Sbjct: 119 RKGEEEGFEVVIVTGDRDALQLVTEDVSVMYTKRGISDIVRYDLNKVRERYELEPQQLID 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRK-KLETHKEMAF 226 GL G SS +PGV GIG K+A +LL EF SLE I +N+D V+ K RK L+ + + A Sbjct: 179 MKGLMGDSSDNIPGVPGIGEKTAIKLLKEFSSLEEILDNIDKVSGKKRKENLQKYADQAR 238 Query: 227 LCRDIARLQTDLHIDGNLQQLRLVR 251 L + + ++ D+ +D L + L + Sbjct: 239 LSKRLGEIKVDVPLDVELDECHLGK 263 >UniRef50_Q2LQV1 DNA polymerase I n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQV1_SYNAS Length = 901 Score = 324 bits (832), Expect = 1e-87, Method: Composition-based stats. Identities = 80/258 (31%), Positives = 130/258 (50%), Gaps = 12/258 (4%) Query: 2 AVHLLIVDALNLIRR-IHAVQ--------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 + +VD N + R +A++ + V + L +L+ +P + FD Sbjct: 12 KSTIYLVDGSNYLYRAFYAIRELSNSRGLPTNAVYGFTNMLIKLLRERKPEYIAITFDL- 70 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH+ YKA R PE L ++P ++ +P G EADD+ TLA Sbjct: 71 -KGPTFRHETYAQYKATRKATPEALIPQIPYIKDIIRGFSIPILEQQGTEADDIIGTLAC 129 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 + G + IVS DK QLLSP + + D R D + + FGV P+++P+ GL Sbjct: 130 RFAGEGLKVIIVSGDKDMLQLLSPDVIMIDTMNDRTYDVAAVRERFGVDPEKVPEILGLT 189 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDI 231 G S +PG+ GIGPK A +L+ E+ S+E I N++ + K R + + E A L RD+ Sbjct: 190 GDMSDNIPGIPGIGPKGALRLVEEYGSIEEILRNVERLRNPKLRDSVRVYGEQALLSRDL 249 Query: 232 ARLQTDLHIDGNLQQLRL 249 AR++T + + +L++ RL Sbjct: 250 ARIRTGIPLTFDLEEARL 267 >UniRef50_A5GAH5 Ribonuclease H n=6 Tax=Desulfuromonadales RepID=A5GAH5_GEOUR Length = 484 Score = 323 bits (829), Expect = 3e-87, Method: Composition-based stats. Identities = 79/257 (30%), Positives = 126/257 (49%), Gaps = 11/257 (4%) Query: 2 AVHLLIVDALNLIRRIH------AVQG---SPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 A L ++D + I R + A G + V L L+ ++P + V D Sbjct: 4 APQLYVLDGSSYIYRAYYGVRDLATSGGMPTNAVFGFTRMLLGLLQENRPDYLAVVLDPP 63 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 R +R + P YKA R MP +L ++P +R + +P G EADD+ ATLA Sbjct: 64 -REETFRRELYPAYKAHRDAMPADLVPQLPYIRQILQALNIPALEAPGFEADDVIATLAR 122 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 + G + T+V+ DK Q++ + + D + + FGV P+ +PD GLA Sbjct: 123 RYAAEGIEVTVVTGDKDLLQIVGDGINLLDTMKDLRSGPQEVLDRFGVPPELVPDVLGLA 182 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW-RKKLETHKEMAFLCRDI 231 G +S +PGV GIG K+A +L+ F SLEG+ + V K R+ L H + A L + + Sbjct: 183 GDTSDNIPGVPGIGEKTAAELVRRFGSLEGVLQWKSLVNGKQRRENLHAHADQARLSKTL 242 Query: 232 ARLQTDLHIDGNLQQLR 248 A ++ D+ +D +L +L Sbjct: 243 ATVRYDVPLDLSLAELE 259 >UniRef50_C8W0H1 DNA polymerase I n=2 Tax=Clostridia RepID=C8W0H1_DESAS Length = 888 Score = 323 bits (828), Expect = 5e-87, Method: Composition-based stats. Identities = 79/257 (30%), Positives = 123/257 (47%), Gaps = 15/257 (5%) Query: 4 HLLIVDALNLIRR-IHAVQ--------GSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 +L++D +LI R HA+ + V + L +++ QP FD Sbjct: 13 TILVIDGNSLIHRAFHAIPLLSTADGLPTNAVYGFTNMLLKILNDIQPKWVTVAFDKSK- 71 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + +R+Q +YKA R PEEL + ++ + G EADDL T+ K Sbjct: 72 -TTFRNQEYSEYKAHRKATPEELRPQFSLVKDVLNALSIKWLEAEGYEADDLIGTIVKKA 130 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYWG 170 + I+S DK QL+S R + +A + ++FGV P Q+ DY G Sbjct: 131 EEEDADVVILSGDKDILQLVSDKTRAILTKKGITEIEEYNAENVYRKFGVHPNQITDYKG 190 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G S +PGV GIGPK+AT+LL +F S+E I NLD + + R +E + E A L + Sbjct: 191 LTGDPSDNIPGVPGIGPKTATKLLQDFDSVENILANLDKITSRARTLMENNSEQALLSKR 250 Query: 231 IARLQTDLHIDGNLQQL 247 +A + T++ + L+Q Sbjct: 251 LATIITNVPVQITLEQC 267 >UniRef50_Q0AVE2 DNA polymerase I n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVE2_SYNWW Length = 866 Score = 322 bits (827), Expect = 6e-87, Method: Composition-based stats. Identities = 79/261 (30%), Positives = 132/261 (50%), Gaps = 16/261 (6%) Query: 1 MAVHLLIVDALNLIRR-------IHAVQG--SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 MA +++D +L+ R +H G + V ++++ QPTH FD Sbjct: 1 MADKFILIDGNSLLYRAFYALPLLHNSAGVYTNGVYGFLTMFNRVLAEIQPTHIAVAFDK 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + S +R++ +YKA R PEEL + LR + G EADD+ TL+ Sbjct: 61 DR--STFRNELYSEYKANRSAPPEELGGQFQLLRDVLAALNIEYLEMQGYEADDIIGTLS 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 K + G + I++ D QL+S + + + D + ++GV+P+++ + Sbjct: 119 KKAEEQGLKTVILTGDGDALQLVSEQVEVLLTKKGISEMELYDPQGVKDKWGVEPEKMVE 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAF 226 GL G +S +PGV G+GPK+A +L+ EF SLE +YENL V K +KLE ++E AF Sbjct: 179 IKGLMGDASDNIPGVPGVGPKTAMKLVQEFTSLENLYENLPQVKGKKLVEKLEQNREQAF 238 Query: 227 LCRDIARLQTDLHIDGNLQQL 247 L R +A + D+ +D +++ Sbjct: 239 LSRQLATINRDMELDFSIEDY 259 >UniRef50_B0KAJ0 DNA polymerase I n=12 Tax=Thermoanaerobacterales RepID=B0KAJ0_THEP3 Length = 872 Score = 321 bits (825), Expect = 9e-87, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 127/260 (48%), Gaps = 15/260 (5%) Query: 4 HLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 L++D +L+ R + + + L +LI +P + FD + Sbjct: 3 KFLVIDGSSLMYRAYYALPMLTTSEGLHTNALYGFTMMLIKLIEEEKPDYIAIAFD--KK 60 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + +RH+ DYKA R MPEEL +++ L+ E + G EADD+ T++ Sbjct: 61 APTFRHKEYQDYKATRQAMPEELAEQVDLLKEIIEGFNIKILELEGYEADDIIGTISKLA 120 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIR----DYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 + + +V+ D+ QL+S ++++ Q D + + + + P Q D G Sbjct: 121 EEKEMEVLVVTGDRDALQLVSDKVKVKISKKGITQMEEFDEKAVLERYEITPHQFIDLKG 180 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G S +PG+ IG K+A +LL +F ++E + +NL + K ++ +E +KE+A + + Sbjct: 181 LMGDKSDNIPGIPNIGEKTAIKLLKDFGTIENLLQNLSQLKGKIKENIENNKELAIMSKK 240 Query: 231 IARLQTDLHIDGNLQQLRLV 250 +A ++ D+ I+ + ++ R+ Sbjct: 241 LATIKRDIPIEIDFEEYRVK 260 >UniRef50_B6IUP1 DNA polymerase I, putative n=2 Tax=Alphaproteobacteria RepID=B6IUP1_RHOCS Length = 987 Score = 321 bits (824), Expect = 1e-86, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 128/258 (49%), Gaps = 12/258 (4%) Query: 2 AVHLLIVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDE 52 L +VD I R + G+P V + L +L+ + +FD + Sbjct: 33 PEALYLVDGSGFIFRAYHALPPLNRPDGTPVNAVLGFTNMLMKLLAELKAEAVAVIFDAK 92 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +R++ PDYKA RP PE+L + +R A + +PC G EADDL AT A Sbjct: 93 RL--NFRNEFYPDYKANRPEPPEDLRPQFAIIREAVDAFCLPCLELEGYEADDLIATYAR 150 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 + G T+VS+DK QL+ +R+ D + R + + ++FGV P+++ D LA Sbjct: 151 LAREQGRPVTVVSSDKDLMQLVRDGVRLMDPMKGRLIGPEEVAEKFGVPPEKVVDVQALA 210 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHKEMAFLCRDI 231 G S VPGV GIG K+A QL+ E+ LE + E + + R+KL + E+A + + + Sbjct: 211 GDSVDNVPGVPGIGVKTAAQLITEYGDLETLLERAGEIRQAGRRQKLLENAELARISKRL 270 Query: 232 ARLQTDLHIDGNLQQLRL 249 RL + + L +LR+ Sbjct: 271 VRLDDAVPVPVPLDRLRV 288 >UniRef50_B3TC83 Putative DNA polymerase family A n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC83_9ZZZZ Length = 891 Score = 321 bits (823), Expect = 2e-86, Method: Composition-based stats. Identities = 83/259 (32%), Positives = 133/259 (51%), Gaps = 13/259 (5%) Query: 2 AVHLLIVDALN-LIRRIHAVQG--------SPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L ++D N + R HA+ G + V L +L+ QP A FD Sbjct: 4 TPRLFLIDGNNQMYRAYHALHGLTGPDGRSTNAVYGFITMLRKLLSDQQPDLVAAAFDL- 62 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH+ DYKA R PMPE+L +++ + A GVP + +G EADD+ TLA Sbjct: 63 -KGPTFRHELAADYKATRRPMPEDLVEQVSWVHEACAALGVPVVTHAGFEADDVIGTLAT 121 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR-WLDAPFIDKEFGVQPQQLPDYWGL 171 + AG + +V+ DK + QL+ +R+ + + W D + ++FGV+P Q+ D L Sbjct: 122 QAVAAGLEVVVVTGDKDFFQLVGDRIRVFNPRDEGAWYDDAGVLEKFGVRPDQVVDVLAL 181 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRD 230 G +S V GV GIG K A +LL +F SL+ + ++ D + +K+R L H + A R+ Sbjct: 182 MGDASDNVKGVPGIGEKGARELLADFGSLDWLLDHADELPKKKYRTALTEHADNARRSRE 241 Query: 231 IARLQTDLHIDGNLQQLRL 249 + RL TD+ + ++ R Sbjct: 242 LVRLVTDVPVPYEPERYRY 260 >UniRef50_A0LCQ8 DNA polymerase I n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LCQ8_MAGSM Length = 911 Score = 319 bits (819), Expect = 5e-86, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 124/260 (47%), Gaps = 12/260 (4%) Query: 2 AVHLLIVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDE 52 L ++D + R G P + L ++I +P FD Sbjct: 3 TQRLFLIDGSGYLYRAFFGVRNLTRRDGFPTNAIFGFIKMLRKVIEDEKPDFVTIAFD-- 60 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +RH YKA R PMP+EL ++P + + +P + G EADD+ T A Sbjct: 61 TKAPTFRHTMDAQYKANRKPMPDELRVQIPVIHDVIDAFNIPRIALEGYEADDIIGTFAR 120 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 AG + +VS DK QL++P +++ D + +W + + +GV +++PD GLA Sbjct: 121 LGCAAGVEVVVVSGDKDLMQLITPQVKMFDGSKDKWYGPEDVVESWGVAAERIPDLLGLA 180 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLCRDI 231 G +S +PGV GIGPK+A QL+ EF SLEG+ + + K R L + A + Sbjct: 181 GDTSDNIPGVGGIGPKTAAQLIAEFGSLEGVLHGAERIKQPKRRTALLEQADTARRSLQL 240 Query: 232 ARLQTDLHIDGNLQQLRLVR 251 A + ++ + +LQ R+ R Sbjct: 241 ATINREVPLPFDLQGARMQR 260 >UniRef50_D0XR83 DNA polymerase I n=2 Tax=Alphaproteobacteria RepID=D0XR83_9CAUL Length = 994 Score = 319 bits (819), Expect = 6e-86, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 127/263 (48%), Gaps = 17/263 (6%) Query: 2 AVHLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMHSQ----PTHAVA 47 AV L ++DA I R + G P V+ + L +L+ + PTH A Sbjct: 44 AVRLWLIDASAYIFRAYHALPPLTRKSDGLPVGAVQGYCNMLWKLLKDMKGADGPTHLAA 103 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 +FD ++ +R+ YKA R PE+L + P +R A GV C G EADDL Sbjct: 104 IFDHSEKT--FRNALYDQYKANRSAPPEDLVPQFPLVRDATRAFGVHCVELPGYEADDLI 161 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPD 167 AT A KV AG + IVS+DK QL+ P++ + D + R L + ++FGV P ++ D Sbjct: 162 ATYACKVRDAGGECVIVSSDKDLMQLIGPSVVMWDPMKDRRLAEDAVMEKFGVTPDKMID 221 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAF 226 L G S VPG GIGPK+A QLL E+ L+ + E + K R+ L ++ Sbjct: 222 LQALIGDSVDNVPGAPGIGPKTAAQLLDEYGDLDTLLERAGEIKQPKRRETLINFRDQIL 281 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 L R + RL D + R+ Sbjct: 282 LSRQLVRLTCDAPAPEPIDDFRV 304 >UniRef50_Q6MPP6 DNA polymerase I n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPP6_BDEBA Length = 863 Score = 319 bits (818), Expect = 6e-86, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 128/258 (49%), Gaps = 12/258 (4%) Query: 3 VHLLIVD-------ALNLIRRIHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + ++D A IR + + G P V + +L+ +P + V +D Sbjct: 2 KKIYLIDVSAMFFRAFYAIRALSSPSGVPVNAVYGFLSMMIKLLKEEKPEYLVFCYD--R 59 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +R YKA R MP+EL ++P ++ + GVP + EADD+ TL Sbjct: 60 KEPSFRKTMYDGYKAHRTEMPDELAQQIPYIKRLADLLGVPAFEVESFEADDIIGTLTKW 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 + G + IVS DK + QL+ + + D + +A + +++GV+P Q DY + G Sbjct: 120 SRRNGMEVFIVSGDKDFGQLIEDGVTLYDTMKGVRYNAEGVFEKWGVRPDQFIDYLAIVG 179 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHKEMAFLCRDIA 232 +S VPGV G+G K A +LL +F+ +E IYEN+D V K R+KL K+ A L + + Sbjct: 180 DASDNVPGVKGVGEKGAIKLLEQFKHVEDIYENIDKVESKSVREKLIASKDNALLSKKLV 239 Query: 233 RLQTDLHIDGNLQQLRLV 250 + D+ + +L+ +L Sbjct: 240 TISCDVPMPDDLEAYKLK 257 >UniRef50_Q6X9S0 DNA polymerase I n=3 Tax=Bacillales RepID=Q6X9S0_9BACL Length = 903 Score = 319 bits (818), Expect = 6e-86, Method: Composition-based stats. Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 15/259 (5%) Query: 4 HLLIVDALNLIRR-IHAVQ--------GSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 L++VD ++ R +AV+ + V + L +LI +PTH + FD Sbjct: 3 KLILVDGNSVANRAFYAVRLLSTRGGLHTNAVYGFANMLLKLIEEERPTHFLVAFDAGK- 61 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + +RH+ YKAGR P EL ++ P +R GV EADD+ TLA + Sbjct: 62 -ATFRHREYEAYKAGRLQTPPELSEQFPYIRELVRAFGVASGELEEYEADDMIGTLAKRA 120 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 G +V+ D+ QL+S + + + + D I +E+G P ++ D G Sbjct: 121 EAEGVDTLVVTGDRDLLQLVSDRVTVALTRKGITETERYDPARIREEYGFDPDRIRDLKG 180 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G +S +PGV G+G K+A +LL ++ SLE + E+ +A K + L H + A L + Sbjct: 181 LMGDASDNLPGVPGVGEKTALKLLRQYGSLESVLEHASEIAGKLGENLRAHADAARLSKR 240 Query: 231 IARLQTDLHIDGNLQQLRL 249 +A + + + LRL Sbjct: 241 LATIDCAVPLQSGWDWLRL 259 >UniRef50_Q59156 DNA polymerase I n=6 Tax=Clostridia RepID=DPO1_ANATD Length = 850 Score = 318 bits (817), Expect = 9e-86, Method: Composition-based stats. Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 17/261 (6%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + L+I D +++ R + + + + + + +P + FD Sbjct: 1 MKLVIFDGNSILYRAFFALPELTTSNNIPTNAIYGFVNVILKYLEQEKPDYVAVAFDKRG 60 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 R + R +YKA R PMP+ L ++P +R +P G EADD+ +L + Sbjct: 61 REA--RKSEYEEYKANRKPMPDNLQVQIPYVREILYAFNIPIIEFEGYEADDVIGSLVNQ 118 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------RWLDAPFIDKEFGVQPQQLPD 167 G I++ D+ QLL + ++ K + +++GV Q+PD Sbjct: 119 FKNTGLDIVIITGDRDTLQLLDKNVVVKIVSTKFDKTVEDLYTVENVKEKYGVWANQVPD 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 Y L G S +PGV GIG KSA +LL E+ SLE IY+NLD + R+KLE K+MAFL Sbjct: 179 YKALVGDQSDNIPGVKGIGEKSAQKLLEEYSSLEEIYQNLDKIKSSIREKLEAGKDMAFL 238 Query: 228 CRDIARLQTDLHIDGNLQQLR 248 + +A + DL ++ L+ LR Sbjct: 239 SKRLATIVCDLPLNVKLEDLR 259 >UniRef50_Q6X9Q9 DNA polymerase I n=1 Tax=Spirochaeta thermophila RepID=Q6X9Q9_9SPIO Length = 897 Score = 317 bits (813), Expect = 3e-85, Method: Composition-based stats. Identities = 81/259 (31%), Positives = 130/259 (50%), Gaps = 15/259 (5%) Query: 3 VHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 L ++DA LI R + + + + L + + P + V D Sbjct: 2 KPLFLIDAYGLIYRAYFALIRAPMRTKDGRNTSAIYGFFRMLFRFVKEYDPVYCGVVLD- 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + + +R + YKA R PE+LH ++P + E G +G EADD+ TLA Sbjct: 61 -SLTPTFREKTFEAYKATRQKTPEDLHPQIPVIEEILEALGFATVRMNGFEADDVMGTLA 119 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW--LDAPFIDKEFGVQPQQLPDYW 169 G +VS DK QL++ ++I + + LD + +++GV+ Q+ D+ Sbjct: 120 AMAQAEGRPCFVVSGDKDLAQLVTKGVKIVRMDKDDFVVLDEEGVKEKWGVRADQIVDFL 179 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G +S +PGV GIG K+A +LL E+ SLEG+Y +LD ++ R+KLE +E AFL R Sbjct: 180 ALVGDASDNIPGVEGIGEKTAQRLLAEYGSLEGVYAHLDELSPSLRRKLEEGRERAFLSR 239 Query: 230 DIARLQTDLHIDGNLQQLR 248 D+A ++TDL + + LR Sbjct: 240 DLATIRTDLDLSLTIGDLR 258 >UniRef50_C4Z982 DNA polymerase I n=2 Tax=Clostridiales RepID=C4Z982_EUBR3 Length = 903 Score = 316 bits (810), Expect = 5e-85, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 125/265 (47%), Gaps = 18/265 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ L+++D +++ R + + V + + +++ +P + FD Sbjct: 1 MSEKLVLIDGHSILNRAYHGLPDLTNSEGLHTNAVYGFLNIMFKILDEEKPDYLTVAFDV 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH+ YK R PM EEL ++P ++ G+ G EADD+ TL+ Sbjct: 61 --HAPTFRHRMFDAYKGTRKPMDEELRQQVPMIKEMLTAMGIKIVEKEGYEADDILGTLS 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW------LDAPFIDKEFGVQPQQL 165 V+ +AG I+S D+ QL + + +R K+ + + +++GV P++ Sbjct: 119 VRAEKAGMDVAIISGDRDLLQLATDHVMVRIPKTKKTGTEIENYNTADVIEKYGVTPKEF 178 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEM 224 D L G +S +PGV GIG K+A L+ ++ +E ++E+ + V + K + + E Sbjct: 179 IDVKALQGDTSDNIPGVPGIGEKTAGALIAKYHCIEAVHEDAENVKPPRASKNIVEYWEQ 238 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 A + +++A + D +D +L Sbjct: 239 ALMSKELATIILDAPVDYEFSDAKL 263 >UniRef50_A7HP95 DNA polymerase I n=11 Tax=Alphaproteobacteria RepID=A7HP95_PARL1 Length = 979 Score = 315 bits (809), Expect = 8e-85, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 128/258 (49%), Gaps = 17/258 (6%) Query: 3 VHLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMHSQ----PTHAVAV 48 HL +VD I R + G P V + L +LI ++ PTH + Sbjct: 22 DHLFLVDGSGYIFRAYHALPPLTRKSDGMPVGAVAGFCNMLYKLIEDTKDEFEPTHLAVI 81 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD ++ +R+ P+YKA R E+L + +R A GVPC G EADD+ A Sbjct: 82 FDAAAKT--FRNDIYPEYKANRVEPSEDLRPQFALVRDATRAFGVPCIEKKGYEADDIIA 139 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 T A +AG + TIVS+DK QL++ + + D + + + + ++FGV P+++ D Sbjct: 140 TYARLAHEAGARVTIVSSDKDLMQLVNDNVDMLDTMKLKTIAREQVIEKFGVPPEKVVDV 199 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFL 227 LAG S+ VPGV GIG K+A QL+ E+ LE + + +K R+ L E A + Sbjct: 200 QALAGDSTDNVPGVPGIGIKTAAQLIGEYGDLETLLARAGEIKQQKRRENLIEFAEQARI 259 Query: 228 CRDIARLQTDLHIDGNLQ 245 R + L ++ ++ L+ Sbjct: 260 SRRLVELDNNVPLEEPLE 277 >UniRef50_A0PZF5 DNA polymerase I n=27 Tax=Clostridia RepID=A0PZF5_CLONN Length = 878 Score = 315 bits (808), Expect = 9e-85, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 133/261 (50%), Gaps = 16/261 (6%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LLI+D +L+ R + + L ++ +P + V FD Sbjct: 3 KERLLILDGHSLMYRAFFALPPLTNKEGIHTNAIYGFIKMLLKMKEEIKPDYIVTTFD-- 60 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +RH+ +YKAGR MP+EL+++ P ++ + + + G EADDL TL+ Sbjct: 61 KKAPTFRHKEYEEYKAGRAKMPDELNEQFPIVKDILNKLAINIFEIEGFEADDLIGTLSK 120 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 + G + IV+ D+ QL + +R+ + +K D + +E+GV P + D Sbjct: 121 FAEEKGIEVYIVTGDRDALQLATDNVRVVINKKGMSEKEIYDKNKMIEEYGVTPTEFIDV 180 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFL 227 GL G S +PGV GIG K+A +L+ E+ S+E + EN++ ++ K ++ L ++E A L Sbjct: 181 KGLMGDKSDNIPGVPGIGNKTALKLIKEYGSIENVLENVENISGKKMKQNLIDYREQAIL 240 Query: 228 CRDIARLQTDLHIDGNLQQLR 248 + +A + D+ I+ NL +++ Sbjct: 241 SKKLATICKDVPIEINLDEIK 261 >UniRef50_C8PRX0 DNA polymerase I n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PRX0_9SPIO Length = 951 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 80/266 (30%), Positives = 134/266 (50%), Gaps = 20/266 (7%) Query: 1 MAVH----LLIVDALNLIRRIH-----------AVQGSPCVETCQHALDQLIMHSQPTHA 45 M H L ++D+ LI R + A + + +L ++ +P + Sbjct: 1 MTQHTQDTLYLLDSYGLIYRSYFAFISHPLTNKAGENVSALYGFFRSLAMILKTYRPRYF 60 Query: 46 VAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADD 105 +A FD +R+ +RH+ +YKA R PE+LH ++P + G+ C G EADD Sbjct: 61 LAAFD--SRTPTFRHEWYSEYKATRDKTPEDLHAQIPHIEKILTALGIACLRKDGFEADD 118 Query: 106 LAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL---DAPFIDKEFGVQP 162 + ATLA + Q G + I+S DK QL+ + + + L + +GV P Sbjct: 119 IIATLARRSAQEGRRCVIISGDKDLAQLVGDFVSVLKPDKSEALAQCGVEEVKAHWGVAP 178 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHK 222 Q+ DY L G S+ +PGV GIGPK+A +LL ++ +L+ +YE++D++A +KKL K Sbjct: 179 AQMLDYLSLIGDSADNIPGVKGIGPKTAVKLLQDYGTLDAVYEHIDSIAGAVQKKLAAGK 238 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQLR 248 + A+ + + L ++ I+G L R Sbjct: 239 DSAYFSKKLITLADNVPIEGTLDDYR 264 >UniRef50_B6R626 DNA polymerase I superfamily protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R626_9RHOB Length = 980 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 131/265 (49%), Gaps = 20/265 (7%) Query: 3 VHLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMH-------SQPTHA 45 HL+++D I R + G P V + L +++ +PTH Sbjct: 18 DHLILIDGSTFIFRAYHALPPLTRKPDGLPVGAVSGFCNMLWKMMQEGPTKEEGDEPTHF 77 Query: 46 VAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADD 105 +FD ++ +R+ P+YKA RPP PE+L + +R A GVP G EADD Sbjct: 78 AVIFDKSGKT--FRNDFYPEYKAHRPPPPEDLRPQFGLIRQATRAFGVPAIEQQGYEADD 135 Query: 106 LAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQL 165 L AT A + G + TIVS DK QL++ + + D + + + P + ++FGV P+++ Sbjct: 136 LIATYARQAEAQGARVTIVSGDKDLMQLVTDKIGMVDTMKNKIIGKPEVFEKFGVGPEKV 195 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEM 224 + LAG S VPGV GIG K+A L+ EF L+ + E + + +K R+ L E Sbjct: 196 VEVQSLAGDSVDNVPGVPGIGLKTAALLINEFGDLDTLLEQAETIKQKKRRENLIEFAEQ 255 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 A + + + +L+ + ++ ++ + Sbjct: 256 ARISKRLVQLEEAVPVETPVEDFSV 280 >UniRef50_Q1QDQ1 DNA polymerase I n=24 Tax=cellular organisms RepID=Q1QDQ1_PSYCK Length = 988 Score = 314 bits (806), Expect = 2e-84, Method: Composition-based stats. Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 12/256 (4%) Query: 4 HLLIVDALNLIRR-IHAVQGS---------PCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 ++VD + R HA+ + + +AL +L+ PTH FD Sbjct: 40 PFILVDGSYYLFRTYHALPKTMQNSQGLVTNAIRGTLNALLKLMRRYHPTHMAVCFD--T 97 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +S +RH +YKA RP M EL +++P + G+P G EADD+ TLA + Sbjct: 98 KSPTFRHAMSEEYKANRPKMDIELAEQIPYIHRLVTALGIPLLRIEGAEADDIIGTLAYR 157 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 GH I + DK QL++ + + D F + D+ + ++FG+ P+Q+ D+ L G Sbjct: 158 AVAEGHHVVISTGDKDMMQLINDCVILEDSFTGKMTDSAGVVEKFGINPEQMIDFLTLMG 217 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR 233 SS + GV GIG K+A LL E+ +++ + +N+ + + K L + + + +A Sbjct: 218 DSSDGIKGVPGIGKKTAKDLLNEYGNIDNMLKNVANIKGRAGKNLLEYADDIPMNAQLAT 277 Query: 234 LQTDLHIDGNLQQLRL 249 + TDL + + Q L++ Sbjct: 278 IVTDLEVGQDWQDLKI 293 >UniRef50_Q3ABL3 DNA polymerase I n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABL3_CARHZ Length = 831 Score = 314 bits (805), Expect = 2e-84, Method: Composition-based stats. Identities = 66/260 (25%), Positives = 122/260 (46%), Gaps = 15/260 (5%) Query: 4 HLLIVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENR 54 +++VD +L+ R +G P V L ++I +P + FD + Sbjct: 3 KVVLVDGNSLLHRAFFALPPLKTTKGEPTGAVYGFLTMLFRVIKDEKPEYLAVAFDISRK 62 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + +R ++ YK R P+EL + +R + VP G EADD+ L+ Sbjct: 63 T--FRTEQFTAYKGHRKEAPDELVPQFALVREVLKVLNVPYIELDGYEADDIIGHLSRAF 120 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLPDYWG 170 GH+ I + D+ QL+ + + +D I + +G++P+QL D G Sbjct: 121 AGQGHEVVIYTADRDMLQLVDEKTVVYLTKKGITELVKMDLAAILENYGLKPKQLVDVKG 180 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G S +PGV GIG K+A L+ + S+E + + D + K R+KL H+ +A + + Sbjct: 181 LMGDPSDNIPGVPGIGEKTALDLIKTYGSVEEVLAHKDELKPKLREKLAEHENLAKISKQ 240 Query: 231 IARLQTDLHIDGNLQQLRLV 250 +A + ++ ++ +L+ L++ Sbjct: 241 LATILREIPLEISLEDLKVK 260 >UniRef50_Q1RH76 DNA polymerase I n=18 Tax=Rickettsia RepID=DPO1_RICBR Length = 871 Score = 314 bits (805), Expect = 2e-84, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 132/260 (50%), Gaps = 14/260 (5%) Query: 1 MAVH--LLIVDALNLIRRIHAVQ-------GSP--CVETCQHALDQLIMHSQPTHAVAVF 49 M LL++D + R + Q G P + L +L+ +P HA VF Sbjct: 1 MTKKNTLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFTSMLLKLLNDFKPKHAAVVF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH+ P+YKA RPP PE+L ++P +R P +G EADD+ AT Sbjct: 61 DSGGK--NFRHEIYPEYKANRPPPPEDLIAQLPLVRDVARNLNFPILEKNGFEADDIIAT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 A K G + ++S+DK QL++ ++I D + +++ + ++FGV +L + Sbjct: 119 FAAKTASIGEEVVVISSDKDLLQLMNDNVKIYDPLKAKYITEDNVVEKFGVTSDKLREVM 178 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLC 228 L G S +PGV IGPK+A+ L+ +F ++E I+ +L+ V+ K R+ L+ KE A + Sbjct: 179 ALIGDKSDNIPGVPSIGPKTASSLITQFGTVENIFNSLEQVSSIKQRETLQNSKEAALIS 238 Query: 229 RDIARLQTDLHIDGNLQQLR 248 + L ++ +D L L Sbjct: 239 WQLIGLDYNVDMDFKLDALE 258 >UniRef50_Q0F0N6 DNA polymerase I n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0N6_9PROT Length = 917 Score = 314 bits (805), Expect = 2e-84, Method: Composition-based stats. Identities = 77/261 (29%), Positives = 123/261 (47%), Gaps = 14/261 (5%) Query: 1 MAVHLLIVDALNLIRR-IHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFD 50 M HL+++D N + R HAV+ + V L ++ PTH FD Sbjct: 1 MP-HLVLIDGPNYVFRAFHAVRHNLTNSKGEPTNAVFGYVQMLRSILKELGPTHVAVAFD 59 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + + +R++ DYKA RPPMPE+L + P++ + + EADD+ ATL Sbjct: 60 PKGGT--FRNRMYADYKAHRPPMPEDLAAQWPSIFDVTDAFRLNRICVEDYEADDVIATL 117 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 A + G +IVSTDK QL+ + + D +++ + + +GV P ++ D Sbjct: 118 ARQAEARGWDVSIVSTDKDLMQLVGERIWMLDTMKRKDYGPEEVKERWGVGPDRIQDLLA 177 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLCR 229 LAG S+ +PGV GIGPK+A LL + LEG+ + +K R+ L + A L Sbjct: 178 LAGDSADNIPGVPGIGPKTAVTLLEAYGDLEGVLTRAGEIKQQKRRENLIEFADDARLSY 237 Query: 230 DIARLQTDLHIDGNLQQLRLV 250 + L + + L L + Sbjct: 238 RLVALDEQVPLPIELDDLAVT 258 >UniRef50_A5WH47 DNA polymerase I n=4 Tax=Bacteria RepID=A5WH47_PSYWF Length = 1022 Score = 313 bits (804), Expect = 2e-84, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 12/256 (4%) Query: 4 HLLIVDALNLIRR-IHAVQGS---------PCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 ++VD + R HA+ + + +AL +++ PTH FD Sbjct: 53 PFVLVDGSYYLFRTYHALPKTMMTTQGLTTNAIRGTLNALLKVMRRYHPTHMAVCFD--T 110 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +S +RH +YKA RP M EL +++P + G+P G EADD+ TL + Sbjct: 111 KSPTFRHTMSEEYKANRPKMDPELAEQIPYIHRLVRALGIPLLRIEGAEADDIIGTLTHR 170 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 + GH I + DK QL++ + + D F + +D P ++++FG++P Q+ D L G Sbjct: 171 AIEEGHHVVISTGDKDMMQLVNDCVILEDSFAGKVVDVPAVEEKFGIKPNQIIDLLTLMG 230 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR 233 +S + G+ +G K+A + L ++Q+++ I N + K +KL + R +A Sbjct: 231 DASDGIKGIPSVGQKTAVKWLNQYQTVDNILANAHNIKGKVGEKLVEFVDNIPRDRQLAT 290 Query: 234 LQTDLHIDGNLQQLRL 249 + T+L I + + LR+ Sbjct: 291 IVTNLDIGQDWEDLRI 306 >UniRef50_B9KYZ1 DNA polymerase I n=4 Tax=Thermomicrobia (class) RepID=B9KYZ1_THERP Length = 917 Score = 313 bits (803), Expect = 3e-84, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 19/262 (7%) Query: 4 HLLIVDALNLIRRIHAV--------QGSPC--VETCQHALDQLIMHSQPTHAVAVFDDEN 53 L++VD L R + G P V L +++ +P + + FD Sbjct: 9 RLVLVDGHGLAYRAYHALPPTLATSAGEPTHVVFGFASMLLEVLNDFEPDYVIVCFDTGR 68 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +R Q +YKA RP P++L ++ +R + G+P + G EADDL TLA + Sbjct: 69 ---SFRQQLYEEYKAHRPETPDDLKHQLERIRQLLDALGIPIVTREGYEADDLIGTLAAR 125 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW-----LDAPFIDKEFGVQPQQLPDY 168 T G + IV+ D QL+ +R+ ++R+ D + + +G P++LP+Y Sbjct: 126 ATANGLEVLIVTGDTDLLQLVDEDVRVILPGRQRFGDYRVYDRQAVIERYGFPPERLPEY 185 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFL 227 L G S +PGV GIG K+AT+L+ F SLE + + +D V + R+ L +E Sbjct: 186 KALVGDPSDNIPGVPGIGEKTATRLIQRFSSLEEMLDRIDEVEPPRLREALRAARETVLA 245 Query: 228 CRDIARLQTDLHIDGNLQQLRL 249 R +A + D I +L+Q R Sbjct: 246 SRRLATIVRDADITLDLEQARF 267 >UniRef50_C7MNN5 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID=C7MNN5_CRYCD Length = 885 Score = 313 bits (802), Expect = 4e-84, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 134/261 (51%), Gaps = 16/261 (6%) Query: 1 MAVHLLIVDALNLIRRIH--------AVQGSP--CVETCQHALDQLIMHSQPTHAVAVFD 50 M + ++D +L+ R + A G+P V + I + P V FD Sbjct: 1 MPKTIAVIDGNSLMHRAYHAVPPTMNAPDGTPTNAVFGFLSMFLKFIDIAHPDAVVCAFD 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 R L YKA RPPM ++L + P + G+P G E DD+ T+ Sbjct: 61 VGK--PQHRIAALEQYKAQRPPMDDDLRVQFPVVEQVLAAMGIPAVKVPGWEGDDILGTI 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLP 166 A + AG+ +V+ DK CQL S RI + + D +++++GV P+Q+P Sbjct: 119 AARGDAAGYDTLLVTGDKDACQLASDHTRIVNTKRGISDVVIFDPAGVEEKYGVSPEQIP 178 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D+ GL G SS +PGV GIGPK+A +LL F S+EGIYE+LD + K ++ + +++ AF Sbjct: 179 DFLGLMGDSSDNIPGVPGIGPKTAAKLLQRFGSIEGIYEHLDELKGKQQESIRDNRDAAF 238 Query: 227 LCRDIARLQTDLHIDGNLQQL 247 L RD+A ++ DL + +L+ L Sbjct: 239 LSRDVAIIKCDLDFELDLENL 259 >UniRef50_Q9S1G2 DNA polymerase I n=25 Tax=Rhizobiales RepID=DPO1_RHILE Length = 1016 Score = 312 bits (800), Expect = 7e-84, Method: Composition-based stats. Identities = 84/252 (33%), Positives = 128/252 (50%), Gaps = 20/252 (7%) Query: 3 VHLLIVDALNLIRR-IHAV-------QGSP--CVETCQHALDQLIMHSQ-------PTHA 45 HL +VD I R HA+ G P V + L +L+ ++ PTH Sbjct: 22 DHLFLVDGSGFIFRAFHALPPLTRKTDGLPIGAVSGFCNMLWKLLRDARNTDVGVTPTHL 81 Query: 46 VAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADD 105 +FD ++ +R YKA R PEEL + +R A +PC T G EADD Sbjct: 82 AVIFDYSAKT--FRKDLYDAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGFEADD 139 Query: 106 LAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQL 165 + AT A + G TIVS+DK QL+SP + + D + + + P + +++GV P+++ Sbjct: 140 IIATYARQAEATGADVTIVSSDKDLMQLVSPNVHMYDSMKDKQIGIPDVIEKWGVPPEKM 199 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEM 224 D + G S VPG+ GIGPK+A QLL E+ L+ + E + + K R+ + + +M Sbjct: 200 IDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQVKRRETILANIDM 259 Query: 225 AFLCRDIARLQT 236 A L RD+ RL+T Sbjct: 260 ARLSRDLVRLRT 271 >UniRef50_B8H5J7 DNA polymerase I n=23 Tax=Alphaproteobacteria RepID=B8H5J7_CAUCN Length = 982 Score = 312 bits (800), Expect = 8e-84, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 121/260 (46%), Gaps = 16/260 (6%) Query: 2 AVHLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMHSQ---PTHAVAV 48 AV L +VD + R + G P V+ + L +L+ Q PTH + Sbjct: 40 AVRLFLVDGSAYLFRAYHALPPLTRKSDGLPVGAVQGFCNMLWKLLRDMQGDTPTHLAVI 99 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 +D ++ +R+ YKA RPP PE+L + P +R A GVP G EADDL A Sbjct: 100 WDHSEKT--FRNALYDQYKAHRPPPPEDLIPQFPLVREATLAFGVPAIELPGYEADDLIA 157 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 A K G +A IVS+DK QL+ + + D + ++ + ++FGV P+++ D Sbjct: 158 AYACKARDIGGEAIIVSSDKDLMQLVGDGVSMYDPMKGVRIEREQVFEKFGVYPEKVVDV 217 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFL 227 L G S VPG GIG K+A QL+ E+ L+ + + K R+ L + L Sbjct: 218 QALCGDSVDNVPGAPGIGIKTAAQLITEYGDLDTLLARAGEIKQPKRRETLINFADQIRL 277 Query: 228 CRDIARLQTDLHIDGNLQQL 247 R + +L D + L L Sbjct: 278 SRALVKLDCDTPLPQPLDAL 297 >UniRef50_Q9RAA9 DNA polymerase I n=2 Tax=spotted fever group RepID=DPO1_RICFE Length = 922 Score = 312 bits (800), Expect = 8e-84, Method: Composition-based stats. Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 12/257 (4%) Query: 2 AVHLLIVDALNLIRRIHAVQ-------GSP--CVETCQHALDQLIMHSQPTHAVAVFDDE 52 LL++D + R + Q G P + L +L+ +P H VFD Sbjct: 4 KNTLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFASMLLKLLSDFKPKHVAVVFDSG 63 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH P+YKA RPP PE+L ++P +R P +G EADD+ AT A Sbjct: 64 GK--NFRHHIYPEYKANRPPPPEDLVVQLPLVRDVASNLNFPILEKNGYEADDIIATFAA 121 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 K G ++S+DK QL+ ++I D + +++ + K+FG +L + L Sbjct: 122 KTAALGEDVVVISSDKDLLQLMGENIKIYDPLKGKYITEDDVVKKFGTTSDKLREVMALI 181 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDI 231 G S +PGV IGPK+A+ L+ +F S+E I+ +L+ V+ K R+ L+ KE A + + Sbjct: 182 GDRSDNIPGVPSIGPKTASSLITQFGSVENIFNSLEQVSSLKQRETLQNSKEAALISWQL 241 Query: 232 ARLQTDLHIDGNLQQLR 248 L +++ +D L L Sbjct: 242 IGLDSNVDLDFQLNNLE 258 >UniRef50_A4YLA1 DNA polymerase I (POL I) n=63 Tax=cellular organisms RepID=A4YLA1_BRASO Length = 1034 Score = 311 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 17/260 (6%) Query: 3 VHLLIVDALNLIRRIHAVQ----------GSPCVETCQHALDQLIMH----SQPTHAVAV 48 H+ +VD + I R + V + L +L+ +PTH V Sbjct: 55 DHVFLVDGSSYIFRAYHALPPLNRKSDGLNVNAVLGFCNMLWKLLRDMPETDRPTHLAIV 114 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + +R+Q DYKA RPP P++L + +R A +PC SG EADDL A Sbjct: 115 FDKSEVT--FRNQIYADYKAHRPPAPDDLIPQFALIREAVRAFDLPCLEQSGFEADDLIA 172 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 T A + G TIVS+DK QL++ + + D + R + + ++FGV P+++ + Sbjct: 173 TYARLACERGATTTIVSSDKDLMQLVNDCVTMYDTMKDRRIGTAEVIEKFGVPPEKVVEV 232 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFL 227 LAG S+ VPGV GIG K+A QL+ ++ LE + + K R+ L + E A + Sbjct: 233 QALAGDSTDNVPGVPGIGIKTAAQLINDYGDLESLLTRAAEIKQPKRREALIENAEKARI 292 Query: 228 CRDIARLQTDLHIDGNLQQL 247 R + L + ++ L L Sbjct: 293 SRQLVLLDDKVALEVPLDDL 312 >UniRef50_Q9F173 DNA polymerase I n=177 Tax=Proteobacteria RepID=DPO1_SALTY Length = 928 Score = 311 bits (798), Expect = 1e-83, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 133/264 (50%), Gaps = 18/264 (6%) Query: 4 HLLIVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENR 54 L++VD + + R + G P + + L LIM QPTHA VFD + + Sbjct: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAVVFDAKGK 67 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + +R + YK+ RPPMP++L ++ L A + G+P + SG EADD+ TLA + Sbjct: 68 T--FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 + G I + DK QL++P + + + L + ++GV P+ + D+ L G Sbjct: 126 EKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFLALMGD 185 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-------KWRKKLETHKEMAFL 227 SS +PGV G+G K+A LL L+ +Y + +A KL +K++A+L Sbjct: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNKDVAYL 245 Query: 228 CRDIARLQTDLHIDGNLQQLRLVR 251 +A ++TD+ ++ +QL + + Sbjct: 246 SYKLATIKTDVELELTCEQLEVQQ 269 >UniRef50_P43741 DNA polymerase I n=222 Tax=cellular organisms RepID=DPO1_HAEIN Length = 930 Score = 310 bits (796), Expect = 2e-83, Method: Composition-based stats. Identities = 80/264 (30%), Positives = 129/264 (48%), Gaps = 18/264 (6%) Query: 2 AVHLLIVDALNLIRR-IHAVQ--------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L++VD + + R HA + + + L LI QPTH VFD + Sbjct: 6 TNPLVLVDGSSYLYRAFHAFPSLTNAAGEPTSAMYGVLNMLKSLISQVQPTHIAVVFDAK 65 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +R + YK+ RPPMP++L ++ L G+P G EADD+ TLA+ Sbjct: 66 GKT--FRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEADDVIGTLAL 123 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 + + G + I + DK QL+ + + + LD + +++G+ P+ + DY L Sbjct: 124 QASSLGKKVLISTGDKDMAQLVDDNIMLINTMNNSLLDRKGVIEKYGIPPELIIDYLALM 183 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEMA 225 G S+ +PGVAG+G K+A LL S+ IY NL+ V A+K +KL K A Sbjct: 184 GDSADNIPGVAGVGEKTALGLLQGIGSMAEIYANLEKVAELPIRGAKKLGEKLLAEKNNA 243 Query: 226 FLCRDIARLQTDLHIDGNLQQLRL 249 L +A ++TD+ ++ QL L Sbjct: 244 DLSYTLATIKTDVELNVTTDQLLL 267 >UniRef50_O34996 DNA polymerase I n=38 Tax=Bacteria RepID=DPO1_BACSU Length = 880 Score = 310 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 16/261 (6%) Query: 3 VHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L++VD +L R + V L +++ +PTH + FD Sbjct: 5 KKLVLVDGNSLAYRAFFALPLLSNDKGVHTNAVYGFAMILMKMLEDEKPTHMLVAFDAGK 64 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH +YK GR P EL ++MP +R + + + EADD+ TLA Sbjct: 65 --TTFRHGTFKEYKGGRQKTPPELSEQMPFIRELLDAYQISRYELEQYEADDIIGTLAKS 122 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 + G + + S DK QL + + + + + +++G+ P+Q+ D Sbjct: 123 AEKDGFEVKVFSGDKDLTQLATDKTTVAITRKGITDVEFYTPEHVKEKYGLTPEQIIDMK 182 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLC 228 GL G SS +PGV G+G K+A +LL +F S+E + E++D V+ K ++KLE K+ A + Sbjct: 183 GLMGDSSDNIPGVPGVGEKTAIKLLKQFDSVEKLLESIDEVSGKKLKEKLEEFKDQALMS 242 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 +++A + TD I+ ++ L Sbjct: 243 KELATIMTDAPIEVSVSGLEY 263 >UniRef50_Q1NVM3 DNA polymerase A n=2 Tax=Deltaproteobacteria RepID=Q1NVM3_9DELT Length = 910 Score = 310 bits (795), Expect = 3e-83, Method: Composition-based stats. Identities = 87/257 (33%), Positives = 130/257 (50%), Gaps = 12/257 (4%) Query: 2 AVHLLIVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDE 52 + ++D I R + G P + L ++I + H VFD Sbjct: 4 PPPVYLIDGSAYIHRAYHAITPLTNRDGLPTHAIYGFTTTLLRVIREGEARHLAVVFDA- 62 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 R +RHQ P YKA RP MPE+L ++P ++ + G EADDL A Sbjct: 63 -RGPNFRHQLYPQYKANRPAMPEDLACQLPYIKEIVAAYRITSLEREGFEADDLIAAAGR 121 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 ++ AGH+ IVS DK QL+ P + D R LDA ++ ++ + P +L DY+ L Sbjct: 122 RLAAAGHRVVIVSGDKDLLQLVGPNITFWDPMGDRLLDAAAVEAKYQLPPAKLLDYFALI 181 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDI 231 G SS +PGV G+GPK+A +L+ EF L+ + NL+ V A K R+KL H++ A L R++ Sbjct: 182 GDSSDNIPGVPGVGPKTAVKLIKEFGDLDQLLANLEQVSAPKLRQKLADHRDAALLAREL 241 Query: 232 ARLQTDLHIDGNLQQLR 248 RL+ DL I ++ R Sbjct: 242 IRLKDDLEIPATPEEYR 258 >UniRef50_A9H4T5 DNA polymerase I n=43 Tax=Alphaproteobacteria RepID=A9H4T5_GLUDA Length = 943 Score = 310 bits (795), Expect = 3e-83, Method: Composition-based stats. Identities = 88/256 (34%), Positives = 127/256 (49%), Gaps = 12/256 (4%) Query: 2 AVHLLIVDALNLIRRI-------HAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDE 52 +HL++VD I R A G+P V + L +L+ TH +FD Sbjct: 6 PIHLILVDGSGFIFRAFHALPPMTAPDGTPVNAVFGFTNMLARLLRDHVGTHLAVIFDAG 65 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R+ YKA RP PEEL + +R A GVP +G EADDL A A Sbjct: 66 RVT--FRNGIYDQYKAHRPEPPEELRPQFALVRDATAAFGVPGIEEAGWEADDLIAAYAR 123 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 VT AG + T+VS+DK QL+ P + + D +++ + ++ +FGV P ++ D L Sbjct: 124 LVTDAGGRCTVVSSDKDLMQLIRPGVEMLDPIRQKPIGPKEVEAKFGVTPDKVIDVQALI 183 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDI 231 G S VPGV GIGPK+A+ L+ E+ SL+ I + A+ K R L H E A L R + Sbjct: 184 GDSVDNVPGVPGIGPKTASALIAEYGSLDAILDGAPAMKPSKRRDSLIEHAERARLSRVL 243 Query: 232 ARLQTDLHIDGNLQQL 247 L+ D L+ L Sbjct: 244 VTLREDAPCPLGLEDL 259 >UniRef50_D1PTJ0 DNA-directed DNA polymerase I (Fragment) n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PTJ0_9BACT Length = 661 Score = 309 bits (793), Expect = 5e-83, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 125/263 (47%), Gaps = 18/263 (6%) Query: 3 VHLLIVDALNLIRR-IHAVQGSPCVE----------TCQHALDQLIMHSQPTHAVAVFDD 51 L ++DA +I R +A P + + L+++I PTH FD Sbjct: 2 EKLFLLDAYAIIFRSYYAFIKRPTINSKGLNTSAILGFCNTLNEIIEKENPTHIGVAFDY 61 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 +RH+ P YKA R PE++ +P ++ + +P +G EADD+ TLA Sbjct: 62 ---GKTFRHEAFPPYKAQREATPEDIKLSVPHIQDILKAMHIPILQVNGFEADDVIGTLA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLD---APFIDKEFGV-QPQQLPD 167 + + G + +++ DK Y QL+ + + D I ++G+ Q+ D Sbjct: 119 TQAAEKGIETYMLTPDKDYGQLIRQHVYMFRPRHGGGYDKIGEKEIQAKYGIASAAQVID 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 L G SS PG G+G K+A +L+ EF + E + EN D + K R+K+E + + Sbjct: 179 LLALMGDSSDNYPGCPGVGEKTAVKLIHEFGTCENLIENSDQLKGKMREKVENAVDDIKM 238 Query: 228 CRDIARLQTDLHIDGNLQQLRLV 250 + +A ++TD+ I+ NL +L++ Sbjct: 239 SKFLATIRTDVPIELNLDELKMT 261 >UniRef50_B2RLP5 DNA polymerase I n=2 Tax=Porphyromonas gingivalis RepID=B2RLP5_PORG3 Length = 926 Score = 309 bits (793), Expect = 6e-83, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 120/263 (45%), Gaps = 17/263 (6%) Query: 1 MAVHLLIVDALNLIRR-IHAVQGSP----------CVETCQHALDQLIMHSQPTHAVAVF 49 M L ++DA LI R +A SP V L ++ P H VF Sbjct: 1 MTERLFLLDAYALIFRAYYAFIRSPRIDSTGRDTGAVFGFALTLLDILEKESPEHIAVVF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D S +RH+ +YKA R PE + +P ++ +P EADD T Sbjct: 61 DPPGGS--FRHREYAEYKAQREETPEGIRIAVPLIKEMLAAFRIPAVEVPDFEADDTIGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL---DAPFIDKEFGVQ-PQQL 165 LA + + G +V+ DK + QL+S ++I + ++FG+ P Q+ Sbjct: 119 LAKQAEEQGLAVRMVTPDKDFGQLVSERIKIYRPKSGGGYETWGPAEVCEKFGLSIPGQM 178 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 DY GL G SS +PG GIG K+A +LL E+ S++GIY + D + KK++ +E Sbjct: 179 IDYLGLVGDSSDNIPGCKGIGAKTAEKLLAEYGSIDGIYAHQDELKGAVAKKIQEGEEQT 238 Query: 226 FLCRDIARLQTDLHIDGNLQQLR 248 R +A ++TD I + + R Sbjct: 239 RFSRYLATIRTDAPIVFDSEAYR 261 >UniRef50_C9LLQ0 DNA polymerase I n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLQ0_9FIRM Length = 858 Score = 309 bits (793), Expect = 6e-83, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 124/260 (47%), Gaps = 15/260 (5%) Query: 1 MAVHLLIVDALNLIRRI--------HAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 M L++VD +L+ R + + V + L + + P + FD Sbjct: 1 MEKKLVVVDGSSLLYRAFFGLPPLSYHGIPTNAVMGFLNMLYDIYKNFDPEYMAVSFDKN 60 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +R + +YKA R P P EL + +R A G + G E DD+ TLA Sbjct: 61 KQT--FRSEVYKEYKATRKPAPPELVPQFALIREALRTLGAAVYEVDGYEGDDILGTLAA 118 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIR----DYFQKRWLDAPFIDKEFGVQPQQLPDY 168 + + IV+ D+ QL + + Q + + +++G+ P+Q+ D Sbjct: 119 RYEKE-LPVFIVTGDRDALQLATKDTTVYITQRGVSQMAAMTPEAVVEKYGITPRQVIDM 177 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G +S +PGV G+G K+A +LL ++Q+L+ +Y ++ + K+L +KE+A+L Sbjct: 178 KALMGDTSDNIPGVPGVGEKTAAKLLSQYQTLDNLYGHVGEIKGAVGKRLAANKELAYLS 237 Query: 229 RDIARLQTDLHIDGNLQQLR 248 +A ++TD+ + L++++ Sbjct: 238 YRLATIKTDVPFEAALEEMK 257 >UniRef50_C1A095 DNA polymerase I n=60 Tax=Actinomycetales RepID=C1A095_RHOE4 Length = 915 Score = 309 bits (793), Expect = 6e-83, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 17/260 (6%) Query: 5 LLIVDALNLIRRI-----------HAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L+++D +L R H+ Q + V L L+ QPTH A FD Sbjct: 28 LMLLDGHSLAFRAFYALPAENFKTHSGQATNAVYGFTSMLINLLRDEQPTHLAAAFDVSR 87 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R P+YKA R P+E ++ + G+P + G EADD+ ATL + Sbjct: 88 QT--FRADLFPEYKAQRAKAPDEFKGQIDITKDVLGALGIPVMAEEGFEADDVIATLTTQ 145 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 G++ +V+ D+ QL++ + + + +++++ + P Q PD+ Sbjct: 146 AEALGYRVLVVTGDRDSLQLVTDNVTVLYPKKGVSELTRFTQTAVEEKYSLTPSQYPDFA 205 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G S +PG+ G+G K+AT+ + E+ L+G+ +N+D V K L + L R Sbjct: 206 ALRGDPSDNLPGIPGVGEKTATKWIREYGDLQGLVDNVDKVRGKVGDSLRENLANVLLNR 265 Query: 230 DIARLQTDLHIDGNLQQLRL 249 + + D+ + +QL L Sbjct: 266 QLTEMVRDVPLPYTPEQLVL 285 >UniRef50_Q1V0V5 DNA polymerase I n=3 Tax=Candidatus Pelagibacter RepID=Q1V0V5_PELUB Length = 924 Score = 309 bits (793), Expect = 6e-83, Method: Composition-based stats. Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 20/268 (7%) Query: 2 AVHLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMH-------SQPTH 44 H ++D I R + G P V L +L+ +PTH Sbjct: 7 TDHFYLIDGSGYIFRAYYALPPLTRKSDGLPVGAVSGFCSMLFKLLEDSKSNENLQKPTH 66 Query: 45 AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEAD 104 +FD ++ +R++ DYKA R P++L + +R + +P EAD Sbjct: 67 FAVIFDAARKT--FRNEIYSDYKANRSEAPDDLAPQFEYIRKSVVAFNLPSVDLPNYEAD 124 Query: 105 DLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQ 164 DL AT ++ G + TIVS+DK QL +RI D + +++ I +FGV P++ Sbjct: 125 DLIATYVEQILAKGAKVTIVSSDKDLMQLYRKDVRIFDPMKNKFITPEDIVTKFGVGPEK 184 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKE 223 + D LAG SS VPGV GIG K+A +L+ ++ +LE + +N + + K R+ L +K+ Sbjct: 185 VIDVQSLAGDSSDNVPGVPGIGVKTAAELINKYGTLEKLLDNAQEIKQNKRRETLIENKD 244 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRLVR 251 A + + + L D ++ L++ L + Sbjct: 245 KAIISKKLVTLMKDAPVERKLEEFHLKK 272 >UniRef50_A6TSU6 DNA polymerase I n=13 Tax=Clostridiaceae RepID=A6TSU6_ALKMQ Length = 897 Score = 309 bits (792), Expect = 7e-83, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 128/260 (49%), Gaps = 16/260 (6%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 ++I+D +LI R Q + + L +++ P + FD Sbjct: 4 KRMVIIDGNSLINRAFYALPPLTNKEGQHTNAIYGFMTMLLKVMDDYDPQYISVAFD--R 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +RH+ YKAGR MP EL +++ L+ + + G EADDL TL+ Sbjct: 62 KAPTFRHKSFEGYKAGRKKMPPELAEQLEPLKEVLDAFHIYRVEIDGFEADDLIGTLSKY 121 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 + + IV+ DK QL S ++I + D I +++ V P+Q D Sbjct: 122 AEEQDIECLIVTGDKDALQLASEKVKILFTKKGISSLEIYDPQKIMEQYEVTPEQFIDLK 181 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLC 228 GL G +S +PG+ G+G K+A +LL +F ++E + +N + A+K R+K+E + E A + Sbjct: 182 GLMGDNSDNIPGIPGVGEKTAIKLLKQFGTVENLIQNAGEISAQKLREKVENNTEQAMMS 241 Query: 229 RDIARLQTDLHIDGNLQQLR 248 + +A + T++ ++ L++L+ Sbjct: 242 KRLATIMTNVPVEIELEKLK 261 >UniRef50_A0LIP7 DNA polymerase I n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIP7_SYNFM Length = 902 Score = 308 bits (791), Expect = 9e-83, Method: Composition-based stats. Identities = 85/257 (33%), Positives = 127/257 (49%), Gaps = 13/257 (5%) Query: 2 AVHLLIVDALNLIRRIH-------AVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDE 52 A +VD + I R + +G P V LD+++ +P + VFD Sbjct: 5 ARTFYLVDGSSYIYRAYYAVSRLTNSRGFPTGAVLGFAQMLDKVVREKKPDYICVVFDAP 64 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH+ YKA R PE++ ++P ++ RG+P G EADDL ATL Sbjct: 65 GPT--FRHEMYAPYKATRQKAPEDMIAQIPYIKDLVRFRGIPQMELPGYEADDLIATLTH 122 Query: 113 KVTQAGHQATIVSTDKGYCQLL-SPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + + +VS+DK QL+ P +R D + R ++ +GV P ++ DY L Sbjct: 123 WAVEQDIEVVVVSSDKDLHQLIDDPVVRQWDPQKDRVFMEWEVEDRYGVPPGRMVDYLAL 182 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRD 230 G SS VPGV GIG K+A QLL E+ SL+ IY NL V + R KLE H+E A L R Sbjct: 183 VGDSSDNVPGVKGIGDKTARQLLQEWGSLDRIYANLARVGSASVRDKLEKHREEALLSRR 242 Query: 231 IARLQTDLHIDGNLQQL 247 + + D+ ++ L+ Sbjct: 243 LVSFREDVPVERKLEAF 259 >UniRef50_B0VJ17 DNA polymerase I n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ17_9BACT Length = 918 Score = 308 bits (790), Expect = 1e-82, Method: Composition-based stats. Identities = 81/259 (31%), Positives = 132/259 (50%), Gaps = 15/259 (5%) Query: 1 MAVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 MA L ++D L+ R H + + ++ ++ ++Q + F Sbjct: 1 MAEKLYLIDGTALLYRAHFAFIKNPLINSKGIHTSAIFGVINSFLHILENTQAAYVAISF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D ++ +RH YKA RPPMP+EL ++ ++ FE G+ G EADD+ T Sbjct: 61 D--RKAPTFRHNLYEAYKAQRPPMPDELTAQIEPVKRFFELIGLKEIGLDGYEADDILGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 LA Q +++DK YCQL+ + D + LD + ++GV P+Q DY Sbjct: 119 LAKLYKDQ-FQIVFLTSDKDYCQLVDERSVMLDPMKDIVLDRDAVYAKYGVYPEQFIDYL 177 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G S +PGV+ IGPK+A LL E+Q+L+ IY NLD + + ++ L +KE A+L + Sbjct: 178 ALVGDPSDNIPGVSSIGPKTAAMLLSEYQTLDNIYANLDKLKPRLQEVLRENKENAYLSK 237 Query: 230 DIARLQTDLHIDG-NLQQL 247 +A++ TD+ I +L+ L Sbjct: 238 QLAKIDTDVPIPKPDLEHL 256 >UniRef50_A5CDT3 DNA polymerase I n=2 Tax=Orientia tsutsugamushi RepID=A5CDT3_ORITB Length = 910 Score = 307 bits (788), Expect = 2e-82, Method: Composition-based stats. Identities = 80/256 (31%), Positives = 132/256 (51%), Gaps = 12/256 (4%) Query: 3 VHLLIVDALNLIRRIHAVQ-------GSP--CVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + ++D I R + V G+P V + +I P + V VFD Sbjct: 28 KKIFLLDGYPFIFRAYFVNQDLTSHNGNPIGGVYGFATMIMNIISEFNPEYMVVVFDTGL 87 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +RH+ P+YK+ RP +P EL + P +R + + G EADD+ A+LA K Sbjct: 88 --DNFRHKIYPEYKSHRPELPSELKIQFPLVREIVKYLNINTIEMEGVEADDVIASLANK 145 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 A + IVS+DK QL++ + I D +K+++ ++ GV+P Q+ D+ L G Sbjct: 146 FGNASDEIIIVSSDKDLLQLVNNKVYIYDPIKKQYIREKETIEKLGVRPSQVRDFLSLTG 205 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLCRDIA 232 S +PG+ GIGPK+A +LL +F SL I N +A + RK +E H+++A L + Sbjct: 206 DVSDNIPGIPGIGPKTAIKLLEQFDSLNNILHNYANIASPRHRKLIEEHRQLAELSWQLV 265 Query: 233 RLQTDLHIDGNLQQLR 248 L+ DL+++ +++ LR Sbjct: 266 GLKQDLNLNLSVENLR 281 >UniRef50_D1BM52 DNA polymerase I n=6 Tax=Veillonellaceae RepID=D1BM52_VEIPT Length = 873 Score = 307 bits (787), Expect = 2e-82, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 122/259 (47%), Gaps = 16/259 (6%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L+I+D +L+ R + V L +L P + FD Sbjct: 2 KKLMIIDGSSLLFRAFFALPPLKSALGTPTNAVYGFLTMLIKLYEEINPDYIAVAFDKGR 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R + +YK RP PE+L + ++ + G+ G E DD+ +L+ K Sbjct: 62 QT--FRTEMYSEYKGNRPDAPEDLRPQFSLIQDVLKALGICVIEEEGFEGDDILGSLSKK 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLPDYW 169 I++ D+ QL++ + + + +++ +G P ++ + Sbjct: 120 FGAPEMAVQIITGDRDNLQLVTEHSHVFLTKKGISDMLEVTLDNMEELYGYGPDKVIEMK 179 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLC 228 L G SS +PGV G+G K+A +L+ E+ +LE +YE+++ ++ K +++L +KE+AFL Sbjct: 180 ALMGDSSDNIPGVPGVGEKTALKLITEYGNLESVYEHIEDISGKKLKERLVENKELAFLS 239 Query: 229 RDIARLQTDLHIDGNLQQL 247 R++A ++TD+ + ++ Sbjct: 240 RELATIKTDMELSYKVEDF 258 >UniRef50_C6XHK7 DNA polymerase I n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHK7_LIBAP Length = 976 Score = 307 bits (787), Expect = 3e-82, Method: Composition-based stats. Identities = 84/261 (32%), Positives = 133/261 (50%), Gaps = 17/261 (6%) Query: 4 HLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMHSQ----PTHAVAVF 49 HL +VD + I R G P + + L +L+ +S+ +H +F Sbjct: 6 HLFLVDGSSFIYRAFYATPLLSRKHDGLPVNAIAGFCNMLWKLLQNSRKESIASHFAVIF 65 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +R++ PDYKA RP +PE L ++P +R A + G+P G EADD+ AT Sbjct: 66 DYPAVT--FRNEIYPDYKANRPKIPEMLLPQLPLVRLATQAFGIPAIEIQGFEADDIIAT 123 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 + G TI+STDK QL+SPT + D ++ +D + K++G+ P+++ Sbjct: 124 YTYIAEKEGFAVTIISTDKDLMQLVSPTTCLYDTVKEEKIDIEHVIKKWGIPPEKMVCLQ 183 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLC 228 L G S +PG+ GIG K+A LL E+ +LE I N + +K R+ + + E A L Sbjct: 184 ALTGDSIDNIPGIPGIGYKTAALLLQEYGNLENILINASRIKQKKRRENILEYAETARLS 243 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 R + L+TD+ I L+ L L Sbjct: 244 RKLVMLRTDVPITIPLEHLIL 264 >UniRef50_UPI0001744922 DNA polymerase I n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744922 Length = 971 Score = 306 bits (786), Expect = 3e-82, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 19/266 (7%) Query: 2 AVHLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFD 50 L ++D++ L+ R H + + +AL ++ + +PTH A FD Sbjct: 6 PQRLFLLDSMALLYRAHFALIRKPIFTSDGVNTSALFGYANALLDILQNQKPTHLGAAFD 65 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + RH P YKA R MPE+L +PA + + +P G EADD+ TL Sbjct: 66 TSAPTP--RHTMFPAYKAQREEMPEDLSVAIPAAKRLLKAMRIPVLEVDGWEADDIIGTL 123 Query: 111 AVKVTQAG-HQATIVSTDKGYCQLLSPTLRIRDY----FQKRWLDAPFIDKEFGVQ-PQQ 164 A G + +V+ DK + QL++ I L + + +GV P Q Sbjct: 124 AHHAEARGGFETYMVTPDKDFGQLVTENTLIYKPGRQGADTEILGVKEVCERWGVSNPGQ 183 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + D GL G +S +PG+AG+G K+A +L+ +F S+E + + +D + K + K++ EM Sbjct: 184 VIDLLGLMGDASDNIPGIAGVGEKTAAKLIQQFGSVEAMLDRVDEIEGKLKDKVKAGAEM 243 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRLV 250 A + + +A + D + L L L+ Sbjct: 244 ARISKQLATIMVDAPLTVQLDDLALL 269 >UniRef50_C1XI40 DNA polymerase I n=24 Tax=Bacteria RepID=C1XI40_MEIRU Length = 1273 Score = 306 bits (786), Expect = 4e-82, Method: Composition-based stats. Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 13/256 (5%) Query: 2 AVHLLIVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDE 52 + +VD +L R + +G P + L +L+ + VFD Sbjct: 19 PDRIWLVDGHHLAYRSYFAFEKLATSRGEPTQAIFGFLRTLLKLLKEDG-DCVIVVFDPP 77 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 R+ +RH +YKAGR P++ H ++ ++ + G+ G EADD+ TLA Sbjct: 78 TRT--FRHDAFEEYKAGRAATPDDFHPQLEKIKELVDLMGLQRLEVPGYEADDVIGTLAK 135 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 K Q G+ I++ D+ QLLS +++ R + + +++GV Q DY L Sbjct: 136 KAEQEGYPVRILTGDRDSFQLLSEAVQVMLP-DGRLMHPQAVQEKYGVSVAQWVDYRSLV 194 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIA 232 G SS +PG GIG K+A +LL E+ SLEG+Y NL+A++ K R LE ++ L R ++ Sbjct: 195 GDSSDNLPGAKGIGEKTAAKLLQEWGSLEGLYANLEALSPKIRASLEESRDNVQLSRTLS 254 Query: 233 RLQTDLHIDGNLQQLR 248 + TDL ++ + + Sbjct: 255 LIHTDLPLELDFRDCH 270 >UniRef50_C3U0N1 Truncated DNA polymerase I n=1 Tax=uncultured bacterium RepID=C3U0N1_9BACT Length = 557 Score = 306 bits (784), Expect = 6e-82, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 19/267 (7%) Query: 1 MAVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 M L ++DA+ LI R + + + L LI +PTH F Sbjct: 1 MPKKLFLLDAMALIYRAYYALIRSPRITSKGRNTNAQFGFTSTLIDLINKEKPTHLAVCF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D E + RH +YKA R PE+L +P ++ +P G EADD+ T Sbjct: 61 DTEAATE--RHTDFAEYKANRQAAPEDLISALPDIKKIITAFNIPVVELDGYEADDVIGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQL-LSPTLRIRDY----FQKRWLDAPFIDKEFGVQ-PQ 163 LA + G++ +V+ DK Y QL + + I ++ LDA I +++G++ Sbjct: 119 LAWQAADKGYEVFMVTPDKDYGQLLIHNNVFIYKPPYQGGKEDILDAKKICEKWGIERVD 178 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 Q+ D GL G + +PG+AGIG K+A +LL EF +LE I N D + +K+ KE Sbjct: 179 QVVDMLGLMGDAVDNIPGIAGIGEKTACKLLKEFDNLENILANADNIKGAVGEKIRNGKE 238 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRLV 250 A + + +AR+ TD+ + + + RL Sbjct: 239 AALMSKKLARIITDVPVQFHEEDYRLK 265 >UniRef50_B1YKA1 DNA polymerase I n=3 Tax=Bacilli RepID=B1YKA1_EXIS2 Length = 865 Score = 305 bits (783), Expect = 7e-82, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 18/263 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M LL++D +L R + + L +L+ QPTH + FD Sbjct: 2 MENKLLLIDGNSLTYRAFFALPPMTDAQGRNTNAAYGFTMMLLKLLEEEQPTHMLVAFDA 61 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 S +RH +YK R P EL ++ P +R E G+ EADDL TLA Sbjct: 62 S--SETFRHDVYQEYKGSREKTPSELREQFPIVRDICEALGIQMMELHRYEADDLIGTLA 119 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW----LDAPFIDKEFG-VQPQQLP 166 + + IV+ DK QL++ + + + + + +G ++P Q+ Sbjct: 120 QTMPA--DRIRIVTGDKDLLQLVTSQVEVLITKRGITDVLCMTEELFAETYGGLKPIQMI 177 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D GL G S +PGV GIG K+A +L+ + S+EG+YE+++ + K ++K+ ++E+A Sbjct: 178 DLKGLMGDKSDNIPGVPGIGEKTAIKLISAYGSVEGLYEHVEDLKGKQKEKVVANEELAR 237 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 L +++A ++ D+ +D L L++ Sbjct: 238 LSKELATIKLDVPLDVTLDDLQI 260 >UniRef50_B1C859 DNA polymerase I n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C859_9FIRM Length = 888 Score = 305 bits (782), Expect = 9e-82, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 137/259 (52%), Gaps = 15/259 (5%) Query: 1 MAVHLLIVDALNLIRR-------IHAVQG--SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L+I+DA ++I + +H+ +G + V + + +LI +P + A FD Sbjct: 1 MKKKLVIIDAYSIIYKCFFGVRPMHSPKGISTNAVYGFLNIILKLISDEKPNYLYAAFDK 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ +RH + DYKAGR MPEEL +++P + + + EADD+ +++ Sbjct: 61 GHK--NFRHDKYADYKAGRQSMPEELREQIPYIERLLDAANIISLKVDDYEADDIIGSVS 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPD 167 + G +++ D+ QL+S +I R ++ ++ +++ + P+Q+ D Sbjct: 119 EVADKEGIDTVVITGDRDSFQLVSEHTKILYSKRGISDIEVINEDYLKEKYNLTPKQMID 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 L G S +PGV G+G K+A LL ++ L+G+YE+++ + K ++KL K+ AFL Sbjct: 179 LKALMGDKSDNIPGVKGVGEKTALNLLEKYSDLDGVYEHIEEIKGKLQEKLINDKDNAFL 238 Query: 228 CRDIARLQTDLHIDGNLQQ 246 +D+ ++ ++ ID +L + Sbjct: 239 SKDLGTIEVNMDIDLDLNE 257 >UniRef50_B2V602 5'-3' exonuclease n=4 Tax=Hydrogenothermaceae RepID=B2V602_SULSY Length = 299 Score = 304 bits (781), Expect = 1e-81, Method: Composition-based stats. Identities = 77/258 (29%), Positives = 132/258 (51%), Gaps = 12/258 (4%) Query: 1 MAVHLLIVDALNLIRRIH-------AVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDD 51 M +L++D + + R + A G P V L + + + FD Sbjct: 1 MKNKVLLIDGSSYLYRAYYALPPLTAPDGRPTGAVYGFIRMLLKTLSVFNTPYVAVAFDL 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ RH++ +YKA R P+ L ++P L+ + G+ G EADD+ ATL+ Sbjct: 61 PGKTL--RHEKFSEYKATRKETPDPLKQQIPILKEIIQLLGIKILEIPGYEADDIIATLS 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 K + G++A IV+ DK QL+S ++I + ++ LD I +++G+ PQQ DY + Sbjct: 119 KKAEKEGYEAIIVTPDKDMNQLISDNIKIFNPVKEELLDKEKIKEKYGIHPQQFIDYLTM 178 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLET-HKEMAFLCRD 230 G + +PG+ GIGPK+A LL EF SLE I EN+D + K ++ + KE ++ Sbjct: 179 IGDAVDNIPGIKGIGPKTAAALLQEFGSLENILENVDKLKGKLKESFKELDKEQLQRMKE 238 Query: 231 IARLQTDLHIDGNLQQLR 248 I +L ++ I+ ++ L+ Sbjct: 239 IIKLDANIEINIKIEDLK 256 >UniRef50_A6KZN3 DNA polymerase I n=15 Tax=Bacteroides RepID=A6KZN3_BACV8 Length = 971 Score = 304 bits (781), Expect = 1e-81, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 17/261 (6%) Query: 3 VHLLIVDALNLIRR-IHAVQGSP----------CVETCQHALDQLIMHSQPTHAVAVFDD 51 L ++DA LI R +A SP V + L++++ PTH FD Sbjct: 2 DKLFLLDAYALIYRAYYAFIKSPRINSKGFNTSAVLGFVNTLEEVLKKENPTHIGVAFDP 61 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH+ YKA R PE + +P ++ +P G EADD+ TLA Sbjct: 62 AGPT--FRHEAYEQYKAQREETPEVIRLSVPIIKDIIRAYRIPILEVPGYEADDVIGTLA 119 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK---RWLDAPFIDKEFGVQ-PQQLPD 167 + + G +++ DK Y QL+ + + + + +F +Q P Q+ D Sbjct: 120 TEAGKRGITTYMMTPDKDYGQLVGGNVFMYRPKHTGGFEVMGIEEVKAKFDIQSPAQVID 179 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 GL G SS +PG G+G K+A +L+ ++ S+E + + + + K+ET+++M Sbjct: 180 MLGLMGDSSDNIPGCPGVGEKTAQKLIAQYGSIENLLSHSAELKGALKTKVETNRKMIEF 239 Query: 228 CRDIARLQTDLHIDGNLQQLR 248 + +A ++ D+ I N+ +L+ Sbjct: 240 SKFLATIKIDVPIALNMDELK 260 >UniRef50_D1CFH6 DNA polymerase I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFH6_THET1 Length = 930 Score = 304 bits (779), Expect = 2e-81, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 126/259 (48%), Gaps = 19/259 (7%) Query: 2 AVHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 AV ++++DA +LI R + + + + + L Q+I P FD Sbjct: 6 AVKVVLIDAYSLIYRAYHALPSDLATSKGEKTNAIYGFCNMLVQVINRENPDSIAVAFDV 65 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 +RH +YKA R PMP++L ++ +R +P + G EADD+ +LA Sbjct: 66 ---GKAFRHDEFVEYKAQRAPMPDDLQAQIGRVRQVIAAFDIPVYEVPGYEADDVIGSLA 122 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW-----LDAPFIDKEFGVQPQQLP 166 K++ GHQ IV+ DK + QL+S ++ + + R+ + ++G P+ + Sbjct: 123 KKLSSQGHQVVIVTGDKDFLQLVSDSVSVVLPARGRFSEVQVYTPDLVRLQYGFDPRYIV 182 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMA 225 D+ L G +S +PGV G+G K+A L+ F SL+ I EN+D++ + R ++ H+ Sbjct: 183 DFKALMGDASDNIPGVPGVGEKTARSLIQTFGSLQNILENVDSIKPERIRNAIKEHQSQL 242 Query: 226 FLCRDIARLQTDLHIDGNL 244 +A + TD+ +D Sbjct: 243 IQNLRLATIVTDIDVDIEP 261 >UniRef50_A6G5W6 DNA polymerase I n=2 Tax=cellular organisms RepID=A6G5W6_9DELT Length = 933 Score = 303 bits (778), Expect = 3e-81, Method: Composition-based stats. Identities = 89/259 (34%), Positives = 130/259 (50%), Gaps = 18/259 (6%) Query: 5 LLIVDALNLIRRIH-------AVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 + +VDA N + R + A G P V + + P H +AVFD S Sbjct: 1 MFLVDANNFLFRAYHALPMLTAPDGRPVNAVHGYVRMVQAIRKEFAPQHLLAVFDASG-S 59 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 GWR + +YKA RPP PE+L ++P +R A + +P EADDL A Sbjct: 60 KGWRRELYAEYKANRPPPPEDLQPQIPLVREATDALSIPWLEDPRYEADDLIARYVQAGV 119 Query: 116 QAGHQATIVSTDKGYCQLL-------SPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 +A + IVS+DK QL+ ++R+ D + R + + +FGV P++L D Sbjct: 120 EAKLEVVIVSSDKDLMQLVAGPDDVREGSVRLWDTMKNRRVGPAEVVAKFGVGPEKLGDL 179 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFL 227 LAG SS +PGV GIGPK+AT LL + LEGI N D + +K R+ LET+ E A + Sbjct: 180 LALAGDSSDNIPGVKGIGPKTATSLLETYGDLEGILSNTDKIKQKKRRENLETYAEDARM 239 Query: 228 CRDIARLQTDLHIDGNLQQ 246 R + L+TD + ++ Sbjct: 240 SRKLVALRTDYDLPRPIED 258 >UniRef50_B2UNN5 DNA polymerase I n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNN5_AKKM8 Length = 945 Score = 303 bits (778), Expect = 3e-81, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 125/263 (47%), Gaps = 19/263 (7%) Query: 2 AVHLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFD 50 + L I+D + L R H + V + L ++ H +PTH A FD Sbjct: 6 SKRLFILDGMALAYRAHFAFFSNPIRNSKGVNTSAVYGFANTLLGILEHERPTHIAACFD 65 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 ++ RH+ P YKA R MPEEL D+MP + E +P G EADD TL Sbjct: 66 TSAPTA--RHKLYPAYKANRESMPEELSDQMPLIFRLLEAMNIPILRYEGYEADDTIGTL 123 Query: 111 AVKV-TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQ-PQQ 164 A G Q +VS DK QL+S T + ++ +D + +++G++ Q Sbjct: 124 ARIADGTEGFQTYMVSQDKDLGQLISSTCFLWKPGKRGNDHEVIDLAKLKEQWGIERADQ 183 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + D L G SS +PG+ G+G K+A L+ EF S+E + N D + K ++ +E + M Sbjct: 184 VVDILALMGDSSDNIPGLPGVGEKTAKLLIGEFGSVENLLSNTDKLKGKRKQIVEENGAM 243 Query: 225 AFLCRDIARLQTDLHIDGNLQQL 247 A L + +A + ++ + L +L Sbjct: 244 ATLSKQLATIDRNVPLTVTLPEL 266 >UniRef50_A6NVK8 DNA polymerase I n=2 Tax=Bacteria RepID=A6NVK8_9BACE Length = 889 Score = 303 bits (778), Expect = 3e-81, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 19/261 (7%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + L+++D +++ R Q + V L +L+ +P FD Sbjct: 1 MKLMVIDGNSIVNRAFYGVHMLTTRDGQPTNAVYGFLTILQKLVDEEKPDALCCTFD--R 58 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +RH YKA R MP+EL +MP L+ + +P + G EADDL T++VK Sbjct: 59 KAPTFRHLAYEGYKAQRKGMPDELASQMPILKEVLDAMNIPRYEMDGWEADDLIGTISVK 118 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------RWLDAPFIDKEFGVQPQQLPD 167 AG +V+ DK QL++ R++ + + + + +G P + D Sbjct: 119 DAAAGWDTVVVTGDKDSLQLVTDRTRVKLVSTRMGQTTTKEMTPDTFRETYGFDPIHIID 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK--WRKKLETHKEMA 225 L G +S +PGV G+G K+A L+ +QS+E IY +LD V K KKL +E A Sbjct: 179 LKALMGDASDNIPGVKGVGEKTAMDLIQRYQSVEAIYADLDKVEAKPAVLKKLTEGREQA 238 Query: 226 FLCRDIARLQTDLHIDGNLQQ 246 + D+A ++TD +D + Sbjct: 239 MMSYDLATIRTDAPLDFKPED 259 >UniRef50_D0L9T3 DNA polymerase I n=2 Tax=Corynebacterineae RepID=D0L9T3_GORB4 Length = 949 Score = 303 bits (777), Expect = 3e-81, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 17/261 (6%) Query: 5 LLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L+++D +L R Q + V L L+ +PTH A FD Sbjct: 26 LMLLDGHSLAYRAFFALPAENFKTATGQTTNAVYGFTSMLINLLRDEEPTHIAAAFDVSR 85 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R + P YKA R P+E + ++ + + G+P + G EADD+ ATLA + Sbjct: 86 KT--FRSEMYPAYKAQRSKSPDEFNGQVDLTKEVLDALGIPVMAIEGYEADDIIATLATQ 143 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 G+ +V+ D+ QL++ ++ + + ++K++G+ P Q PDY Sbjct: 144 ADAEGYSVLVVTGDRDSLQLVNDSVTVLYPRKGVSELTRFTPAEVEKKYGLTPTQYPDYA 203 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G S +PG+ G+G K+A++ + E+ SL + +++D V K L + R Sbjct: 204 ALRGDPSDNLPGIPGVGEKTASKWIREYGSLASLVDHVDEVKGKVGDALRANLASVQTNR 263 Query: 230 DIARLQTDLHIDGNLQQLRLV 250 + L D+ + +L +V Sbjct: 264 QLTELVRDMQLPAGPDELAMV 284 >UniRef50_A6CAX6 DNA polymerase I n=2 Tax=Planctomycetaceae RepID=A6CAX6_9PLAN Length = 900 Score = 303 bits (777), Expect = 4e-81, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 129/260 (49%), Gaps = 12/260 (4%) Query: 1 MAVHLLIVDALNLIRR-IHAV--------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L I+D +L+ + HAV Q + + + +I P + + D Sbjct: 1 MKETLYIIDTFSLVFQVFHAVPAMTGPTGQPTNAIFGITRDILNIIKTHSPDYLIFAMDS 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + R+ +YKA R MPE+L ++P + + VP G EADD+ AT+A Sbjct: 61 SGPGT--RNDLYSEYKANRSAMPEDLVPQIPHIMDVVKGFQVPVIECPGWEADDVFATIA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + G + TIV+ DK QL++ ++R+ + + +++DA + ++GV+P Q+ D+ L Sbjct: 119 RLANEKGIETTIVTNDKDARQLINDSIRLYNIRKNQFMDAEAVQADWGVRPDQVIDFQSL 178 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRD 230 G S +PGV +GPK A L+ +F +LEG+ N D K ++ L+ + A + R+ Sbjct: 179 VGDSVDNIPGVPLVGPKKAQTLIEQFGTLEGVLANADKAKGPKLQQNLKEFADQARMSRE 238 Query: 231 IARLQTDLHIDGNLQQLRLV 250 + L L ++ N + RL Sbjct: 239 LVTLNQSLDLNINWEASRLT 258 >UniRef50_C4LIB4 DNA polymerase I n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LIB4_CORK4 Length = 925 Score = 303 bits (777), Expect = 4e-81, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 17/263 (6%) Query: 2 AVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 LL++D +L R Q + V L L+ +PTH+ A FD Sbjct: 11 KKKLLLLDGHSLAFRAFYALPADKFTDSSGQHTNAVYGFISMLVTLLEQEKPTHSAAAFD 70 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +R ++ DYKA RP P E ++ +R A E G+ EADD+ ATL Sbjct: 71 LAGPT--FRSEKFADYKAQRPETPPEFKGQIELIRQALETFGITTVDYKRYEADDVIATL 128 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLP 166 A + + G I + D+ QL++ + + R +++++GV P Q P Sbjct: 129 ATQGHEQGFDTYICTGDRDSLQLVTDDVTVLYTLRGVSNLARFTPEAVEEKYGVTPTQYP 188 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D L G +S +PGV G+GPK+A + + ++ SL + +N+D + K L + Sbjct: 189 DLAALRGDTSDNMPGVPGVGPKTAQKWINKYGSLSNLIDNIDDIGGKVGDALRRDIDTVI 248 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 R++ + DL I + + + Sbjct: 249 QARELTEMVRDLPIKCSPEDCEI 271 >UniRef50_B0TER6 DNA polymerase i n=2 Tax=Heliobacteriaceae RepID=B0TER6_HELMI Length = 939 Score = 303 bits (776), Expect = 4e-81, Method: Composition-based stats. Identities = 75/257 (29%), Positives = 123/257 (47%), Gaps = 15/257 (5%) Query: 5 LLIVDALNLIRR-IHAVQ--------GSPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 +++D +L+ R +A+ + V L++L QP D + Sbjct: 6 FMVIDGSSLLHRAFYALPLMSTSQGVHTNAVYGFLTMLERLRREYQPDFLAVCLDKSRIT 65 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 R QR YKA R PEEL + L+ +P + G EADDL L Sbjct: 66 --HRTQRYEAYKAQRGATPEELRPQFGLLKEVLAAWRIPLFEEEGYEADDLIGALVCLAK 123 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYWGL 171 + G + IV+ D+ QL+SP + + + D + + G+ P+Q+ D+ GL Sbjct: 124 KQGIDSLIVTGDRDAWQLISPGVEVLFTRKGISELERYDEEALKAKIGLTPRQVVDWKGL 183 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G S +PGV G+G K A +LL +F ++ +YE LD V K ++KL TH+E AFL R++ Sbjct: 184 MGDPSDNIPGVPGVGEKRAFKLLEQFGDMDSLYERLDEVKGKLKEKLATHREQAFLSREL 243 Query: 232 ARLQTDLHIDGNLQQLR 248 A +Q ++ ++ + + R Sbjct: 244 ATIQCNIPLEPDWEACR 260 >UniRef50_Q2GBP7 DNA polymerase I n=10 Tax=Alphaproteobacteria RepID=Q2GBP7_NOVAD Length = 945 Score = 303 bits (776), Expect = 5e-81, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 120/268 (44%), Gaps = 22/268 (8%) Query: 2 AVHLLIVDALNLIRRIH-------AVQGSP--CVETCQHALDQLIMHSQ----PTHAVAV 48 HL +VD I R + +G P V L +L PTH + Sbjct: 4 KQHLYLVDGSAYIFRAYHRLPPLTNPRGVPVGAVYGYTTMLWKLAEDLHKADGPTHLAVI 63 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 D + +R+ YKA RPP PE+L + P +R A + C EADDL A Sbjct: 64 LDKAG--TSFRNDLYDQYKANRPPPPEDLVPQFPLIRDATRAFSLACIEEDALEADDLIA 121 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSP------TLRIRDYFQKRWLDAPFIDKEFGVQP 162 + A T G TIVS+DK QL+ + + D + + +D P + ++FGV P Sbjct: 122 SYARAATLRGWDVTIVSSDKDLMQLVGKCATGGGCIDMLDTMKNQRIDIPEVVEKFGVPP 181 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETH 221 +++ D L G S VPG+ GIGPK+AT+L+ E LE + K R+ L Sbjct: 182 EKVGDVLALMGDSVDNVPGIRGIGPKTATKLIQEHGDLESALAAAPTMKAGKLRESLIEQ 241 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLRL 249 EMA L R + L+ D + ++ +L Sbjct: 242 AEMARLSRVLVALKEDCPLPVPIEDFKL 269 >UniRef50_D2RIE4 DNA polymerase I n=5 Tax=Clostridiales RepID=D2RIE4_ACIFE Length = 872 Score = 303 bits (776), Expect = 5e-81, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 128/265 (48%), Gaps = 18/265 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L++D +LI R + V + + +L+ QP++ + FD Sbjct: 1 MDEKFLLIDGSSLIHRAFFALPPLTNKNGVNTGAVYGLCNMILKLLQEIQPSYMLVAFDK 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ +R ++ P+YK R P EL ++ P + G+P EADD+ TL+ Sbjct: 61 SRKT--FRTEKFPEYKGQRKATPPELKEQFPLSIQLLQSMGIPTLEVDNYEADDIIGTLS 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEF-GVQPQQLP 166 + Q IV+ D+ QL+ +++ + D +E+ G+QP+Q+ Sbjct: 119 SGAPE-NVQVRIVTGDRDEFQLIKGNVQVLFTKKGISNIAVYDEKAFGEEYQGLQPRQII 177 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHKEMA 225 D GL G +S +PGV G+GPK+A +L+ E++++E + ++ + V K ++KL ++E A Sbjct: 178 DLKGLMGDTSDNIPGVPGVGPKTALKLITEYRTVENVLDHAEEVKGKALKEKLRNNREQA 237 Query: 226 FLCRDIARLQTDLHIDGNLQQLRLV 250 L +D+A + + ID + L Sbjct: 238 LLSKDLATICLQVPIDRDPGAYVLT 262 >UniRef50_B2TNM6 DNA polymerase I n=7 Tax=Clostridiales RepID=B2TNM6_CLOBB Length = 871 Score = 303 bits (776), Expect = 5e-81, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 126/260 (48%), Gaps = 16/260 (6%) Query: 3 VHLLIVDALNLIRR-IHAVQ--------GSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 LLI+D+ +L+ R +A+ + + + L ++ P + +A FD Sbjct: 2 KRLLILDSNSLMNRAFYALPPLTNDDGVNTNAIYGFTNMLFKMKDEINPDNIIATFD--K 59 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +S +RH+ +YKAGR MP EL ++ P ++ + G+ + G EADD+ T++ Sbjct: 60 KSPTFRHKEYSEYKAGRKKMPPELGEQFPIIKELLKYMGIKTFEIDGFEADDIIGTISKF 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLPDYW 169 + + IV+ DK QL S ++ + D EF + P Q D Sbjct: 120 GEENDMEVYIVTGDKDALQLASEKTKVVITKKGVTETAIYDYKAFMDEFEITPTQFIDVK 179 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLC 228 GL G S +PGV G+G K+A +L+ E+ +LE + +++ ++ K ++ LE + E A Sbjct: 180 GLMGDKSDNIPGVPGVGEKTAFKLIKEYGTLEDVLKHIPEISGKKLKENLENNMEQAIFS 239 Query: 229 RDIARLQTDLHIDGNLQQLR 248 + +A + ++ +D NL + Sbjct: 240 KKLATIMREVPLDINLSDIE 259 >UniRef50_C3J9S9 DNA polymerase type I n=2 Tax=Bacteria RepID=C3J9S9_9PORP Length = 937 Score = 302 bits (774), Expect = 7e-81, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 128/260 (49%), Gaps = 16/260 (6%) Query: 3 VHLLIVDALNLIRRIH-AVQGSP----------CVETCQHALDQLIMHSQPTHAVAVFDD 51 L ++DA LI R + A +P + ++L ++I +P + +FD Sbjct: 8 KRLFLLDASMLIYRAYFAFIHTPRFDSKGNNTSALLGFANSLIEIIKKEKPDYLAVIFDP 67 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 E S +RH+ YKA R PE + P ++ E +P EADD+ TL+ Sbjct: 68 EGGS--FRHREYTAYKAQRDATPEGILWAFPQVKRLLEALRIPAIEVPDYEADDVVGTLS 125 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK--RWLDAPFIDKEFG-VQPQQLPDY 168 + + G + +V+ DK Y QL++ + K + ++FG V Q+ DY Sbjct: 126 QRAEKEGFEVYMVTADKDYGQLVTEHALMYRPGTKGAEVWGEAEVCEKFGLVHCSQMVDY 185 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G +S +PG GIGPK A++LL +F S++ IYE+LD ++ +KKLE +E L Sbjct: 186 LALVGDASDNIPGCKGIGPKKASELLTQFGSIDAIYEHLDELSPSLKKKLEEGRENTLLS 245 Query: 229 RDIARLQTDLHIDGNLQQLR 248 R +A++ T++ ++ + R Sbjct: 246 RYLAKICTEVPMEVEWETFR 265 >UniRef50_Q3Z6P9 DNA-directed DNA polymerase I n=5 Tax=Dehalococcoides RepID=Q3Z6P9_DEHE1 Length = 903 Score = 301 bits (773), Expect = 1e-80, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 19/261 (7%) Query: 5 LLIVDALNLIRRIHAVQGSPCV----------ETCQHALDQLIMHSQPTHAVAVFDDENR 54 +++ D NL+ R + V + L +++ +P FD + Sbjct: 6 IVLFDGTNLVHRAYHVLPPLAIRKTGEVVGAAFGFASILIKVLTDLKPDCYAISFD--RK 63 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 +RH+ YKA RPPMP+EL ++ +R + +P + SG EADD+ TLA + Sbjct: 64 GPTFRHEMFKAYKAQRPPMPDELVSQLGRVRQIVDAFNMPVYEQSGFEADDVLGTLATRA 123 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIR------DYFQKRWLDAPFIDKEFGVQPQQLPDY 168 AG + I S D QL+ P +RI + D + ++G+ P+ + DY Sbjct: 124 AAAGMEVIIASGDADSMQLVGPDIRILYPGPAGSFASTSLYDEVAVRAKYGLGPEHIADY 183 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFL 227 L G S +PGV GIGPK+A +L+ E+ +E IY+NLD + +KKL + E+A Sbjct: 184 KALMGDPSDNIPGVPGIGPKTAQKLIEEYGGIEDIYKNLDKISPPGLQKKLADNAEVARD 243 Query: 228 CRDIARLQTDLHIDGNLQQLR 248 + + + DL +D ++++ R Sbjct: 244 SKILTTIVCDLPLDFSIEECR 264 >UniRef50_C7GEY2 DNA polymerase I n=6 Tax=Clostridiales RepID=C7GEY2_9FIRM Length = 930 Score = 301 bits (773), Expect = 1e-80, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 129/265 (48%), Gaps = 18/265 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L+++D +++ R + V + + +++ QP + FD Sbjct: 5 MGEKLVLIDGHSILNRAFFGIPDLTNSEGLHTNAVYGFLNIMFKILEEEQPDYLTVAFDV 64 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH+ +YK R PM +EL +++P ++ + GV G EADDL T+A Sbjct: 65 SEPT--FRHKMFAEYKGTRKPMAQELREQVPLMKEMLKAMGVTTIEKGGYEADDLLGTIA 122 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW------LDAPFIDKEFGVQPQQL 165 + Q G ++VS D+ QL + ++IR KR +A + +++ V P + Sbjct: 123 KQSEQKGLTVSVVSGDRDLLQLATDHIKIRIPKTKRTGTEIEDYNAAEVQEKYQVTPIEF 182 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEM 224 D L G ++ +PGV GIG K+AT ++ ++ S+E Y ++D + + K L+ + ++ Sbjct: 183 IDVKALMGDTADNIPGVPGIGEKTATAIIAQYGSVENAYAHVDELKPPRASKNLKEYYDL 242 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 A + + +A ++ ID +L +L Sbjct: 243 AQMSKTLATIEIHADIDYDLSGAKL 267 >UniRef50_D0WFK8 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID=D0WFK8_9ACTN Length = 905 Score = 301 bits (771), Expect = 2e-80, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 16/259 (6%) Query: 1 MAVHLLIVDALNLIRRIH--------AVQGSP--CVETCQHALDQLIMHSQPTHAVAVFD 50 M + ++D +L+ R + AV G+P L + ++P V FD Sbjct: 1 MPRTIAVIDGNSLMHRAYHAVPPTMNAVDGTPTNAAFGFMSMLLKFYEDARPDAIVCAFD 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + R + + YKA RPPM +EL + P + + G+P G E DD+ T+ Sbjct: 61 AGKPT--HRIEAMKAYKAQRPPMDDELRVQFPVIEGLLDAMGIPVVKVKGWEGDDILGTI 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLP 166 A + G +V+ DK QL+S R+ + + + +GV Q P Sbjct: 119 AARDEALGWNTLLVTGDKDAYQLVSDHTRVVTTRKGITDVVIYGPDEVLERYGVTAAQFP 178 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D+ GL G ++ +PGV GIGPK+AT+LL + S++GIY+NLD + K + L +++ A+ Sbjct: 179 DFLGLQGDTADNIPGVPGIGPKTATKLLQAYGSMDGIYKNLDKLKGKQLQNLADNRDQAY 238 Query: 227 LCRDIARLQTDLHIDGNLQ 245 L RD+A + DL + +L+ Sbjct: 239 LSRDLAVIVQDLDFELDLE 257 >UniRef50_Q2S226 DNA polymerase I n=4 Tax=Rhodothermaceae RepID=Q2S226_SALRD Length = 926 Score = 300 bits (770), Expect = 2e-80, Method: Composition-based stats. Identities = 81/260 (31%), Positives = 125/260 (48%), Gaps = 17/260 (6%) Query: 5 LLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L ++DA++L R H + Q + ++L +LI HA VFD E Sbjct: 13 LYLIDAMSLAYRAHYIFISRPLINSKGQNTSAAYGFTNSLLKLIEDHDIEHAAVVFD-EG 71 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +R + DYKA R P PEEL + +P ++ E +P G EADD+ LA + Sbjct: 72 EEDTFRKEMYDDYKANRDPPPEELLENIPYIKEIVEGLDIPVLEVPGVEADDVIGALAKQ 131 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 IVS DK + QLLS + I + E+G+ P Q D Sbjct: 132 AEADDADVVIVSPDKDFKQLLSDKVSIYKPAKGDQDFEIKTGDTFRDEYGLDPAQFVDML 191 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW-RKKLETHKEMAFLC 228 L G SS VPGV GIG K+A +LL E+ S+E + ++ D ++ K R+ ++ H E A L Sbjct: 192 ALMGDSSDNVPGVYGIGEKTAQKLLREYHSVENLIDHADDLSGKRAREGMQEHAEEARLS 251 Query: 229 RDIARLQTDLHIDGNLQQLR 248 + + R++T+L + + +L+ Sbjct: 252 KRLVRIRTELDVGLDWHELQ 271 >UniRef50_B8FU82 DNA polymerase I n=2 Tax=Desulfitobacterium hafniense RepID=B8FU82_DESHD Length = 873 Score = 300 bits (770), Expect = 2e-80, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 16/262 (6%) Query: 4 HLLIVDALNLIRR-IHA------VQGSPC--VETCQHALDQLIMHSQPTHAVAVFDDENR 54 +LI+D +L R +A G P + L +L++ +P + V FD Sbjct: 3 KILILDGNSLANRTFYALPMMTTADGKPTNVLHGFMTMLLRLLLEQKPDYWVVAFDKTKA 62 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + R ++ DYKA R P+ L + L+ +P G EADD+ AT+ Sbjct: 63 TV--RIEQYADYKAQRKETPDALKPQFDFLKELLTAFAMPILECPGYEADDIIATVTSLA 120 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW----LDAPFIDKEFGVQPQQLPDYWG 170 Q + I + D+ QL+SP + + D + +++ ++P Q+ D G Sbjct: 121 EQREWETQIYTGDRDALQLISPRTTVYLTRKGITEVDAYDEGALYEKYQLRPAQIIDLKG 180 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCR 229 L G +S +PGV G+G K+A +LL E+ S+E + +N+D ++ K ++ L + + A L + Sbjct: 181 LMGDASDNIPGVPGVGEKTALKLLWEYGSVENVLDNIDKISGKKLQENLRNNTDKALLSK 240 Query: 230 DIARLQTDLHIDGNLQQLRLVR 251 +A + D+ ++ +L +L R Sbjct: 241 KLATMLYDIPLEIDLDRLVYRR 262 >UniRef50_Q21YU4 DNA polymerase I n=39 Tax=Betaproteobacteria RepID=Q21YU4_RHOFD Length = 957 Score = 300 bits (769), Expect = 3e-80, Method: Composition-based stats. Identities = 76/259 (29%), Positives = 119/259 (45%), Gaps = 15/259 (5%) Query: 2 AVHLLIVDALNLIRR-------IHAVQGSP------CVETCQHALDQLIMHSQPTHAVAV 48 LL+VD + + R + AV G P + + L L +A + Sbjct: 12 PKTLLLVDGSSYLYRAFHAMPDLRAVPGDPSSAPTGAIRGMINMLQSLRKEVPADYAACI 71 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FDD + +R P+YKA R PMP++L ++ + G + G EADD+ Sbjct: 72 FDD--KGPTFRDALYPEYKAHRSPMPDDLRSQIEPIHEVVRLMGWKVLAVPGVEADDVIG 129 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 TLAV + G + + S DK QL++ + I D R D ++ EFGV PQ + D+ Sbjct: 130 TLAVTAARQGIEVIVSSGDKDLAQLVNSHITIIDTMNGRRRDVAGVEAEFGVPPQLMVDF 189 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G VPGV +GPK+A + L E+ SL+ + N D + + L+ + L Sbjct: 190 QTLVGDVIDNVPGVPKVGPKTAAKWLQEYGSLDAVVANADQIKGVVGENLKKSLDWLPLG 249 Query: 229 RDIARLQTDLHIDGNLQQL 247 R + ++TD +DG + L Sbjct: 250 RQLLTIKTDCDLDGWMPDL 268 >UniRef50_Q02DA6 DNA polymerase I n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02DA6_SOLUE Length = 865 Score = 300 bits (769), Expect = 3e-80, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 18/262 (6%) Query: 3 VHLLIVDALNLIRRIHAVQG--------------SPCVETCQHALDQLIMHSQPTHAVAV 48 L ++D I R + + + V + L +L P + A+ Sbjct: 8 QKLFLIDTFGFIFRAYHARARTGAPPMRTSTGFSTEAVYIFNNMLRKLSKQHDPPYVAAI 67 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 F E+ + R Q +YKA R P +L D++P +R E +P G EADD+ Sbjct: 68 F--ESGEATHRVQEFAEYKANRTETPPDLLDQIPFVRRVLEAMRIPILEYPGFEADDVIG 125 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQ-KRWLDAPFIDKEFGVQPQQLPD 167 T+ + G IVS+DK QL++ + + + + + + + GV P Q+ D Sbjct: 126 TITRRAEAEGLDVVIVSSDKDMLQLVTEHVSMLNPAKDDKLYNPEEVKTFMGVPPVQVAD 185 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHKEMAF 226 L G S +PG GIG K A Q+L +F S+E E V K +R+ L+ + + Sbjct: 186 LLALMGDSVDNIPGAPGIGDKGAKQILEKFGSIEAALERAAEVERKVYRESLQNNVDRIR 245 Query: 227 LCRDIARLQTDLHIDGNLQQLR 248 + + +A + TD+ I+ L ++ Sbjct: 246 MSKRLATISTDVPIEFTLDAVK 267 >UniRef50_Q65W28 PolA protein n=42 Tax=Bacteria RepID=Q65W28_MANSM Length = 965 Score = 300 bits (769), Expect = 3e-80, Method: Composition-based stats. Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 18/260 (6%) Query: 4 HLLIVDALNLIRR-IHAVQ------GSP--CVETCQHALDQLIMHSQPTHAVAVFDDENR 54 L++VD + + R HA G P + + L LI QP+H VFD + + Sbjct: 17 PLVLVDGSSYLYRAFHAFPPLTNSLGEPTGAMFGVLNMLKSLITQVQPSHIAVVFDAKGK 76 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + +R + YK+ RPPMP++L ++ L G+P S G EADD+ TLA++ Sbjct: 77 T--FRDELFEQYKSHRPPMPDDLRKQIQPLHDIIRALGIPLLSIEGVEADDVIGTLALQA 134 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 + AG + I + DK QL+ + + + LD + +++G+ P+ + DY L G Sbjct: 135 SSAGKKVLISTGDKDMAQLVDDNIMLINTMNNTLLDREGVIEKYGIPPELIIDYLALMGD 194 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEMAFL 227 SS +PG++G+G K+A LL S+ IY NLD V A+K +KL K A L Sbjct: 195 SSDNIPGISGVGEKTALGLLQGIGSMAEIYANLDKVADLPIRGAKKLGEKLAAAKADADL 254 Query: 228 CRDIARLQTDLHIDGNLQQL 247 +A ++TD+ +D N +QL Sbjct: 255 SYVLATIKTDVELDLNPEQL 274 >UniRef50_Q1PUU8 Stongly similair to DNA polymerase I n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUU8_9BACT Length = 887 Score = 300 bits (769), Expect = 3e-80, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 127/260 (48%), Gaps = 13/260 (5%) Query: 1 MAVHLLIVDALN----LIRRIHA----VQGSPC--VETCQHALDQLIMHSQPTHAVAVFD 50 M I+D + I A G+P V L +L+ +P + VFD Sbjct: 1 MPERFFIIDGHSHCYQAFYAITAKLTTPDGTPANAVYGFTRMLLKLLREQRPDYLALVFD 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + ++ RHQ+ DYKA R PE+L ++P + G+P ++ G EADD+ +L Sbjct: 61 TKYTTN--RHQKYSDYKATRKETPEDLQVQIPLIYKVVRAFGIPVYAAKGYEADDVIGSL 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 + + + IV++DK QL+ P ++I + +D+ + + G+ P Q+ D Sbjct: 119 VTVLEKKEIEVVIVTSDKDLEQLIGPKVKILHAKKGEIIDSDVLFTQKGIMPNQVVDVLA 178 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR-KKLETHKEMAFLCR 229 LAG S +PGV GIG K+A L+ ++ SLE + N+ ++ K R + L T + A R Sbjct: 179 LAGDVSDNIPGVPGIGNKTALDLIKKWGSLESVLANVGHISGKKRQENLRTFADQARFSR 238 Query: 230 DIARLQTDLHIDGNLQQLRL 249 ++ L D+ + +++ RL Sbjct: 239 ELLDLYNDIPLTVDMESCRL 258 >UniRef50_B1GZ14 DNA polymerase I n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZ14_UNCTG Length = 908 Score = 299 bits (768), Expect = 4e-80, Method: Composition-based stats. Identities = 76/256 (29%), Positives = 119/256 (46%), Gaps = 12/256 (4%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 I+D I R + + V L ++ +P + FD + Sbjct: 2 KKFFIIDGNAYIHRAYHALPPLSTSNNRQVNAVYGFVKLLLKIKNSFKPDYMAVCFDYPS 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH+ DYKA R P+ + L +MP R A + V G EADDL AT+ Sbjct: 62 K--NFRHEIFKDYKANRKPLDKALISQMPIAREAVKALNVVGIEIKGYEADDLIATVTGN 119 Query: 114 VTQAGHQATIVSTDKGYCQLL-SPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 +G Q IV+ DK QL T+ I +Y + D +++++GV P+QL D + L Sbjct: 120 NKGSGVQTVIVTGDKDILQLAEDETVLIWNYSKDIMYDTKKVEEKYGVAPKQLSDIFALM 179 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIA 232 G +S +PG+ GIG K+A +L+ +F +LE + +N D+V K L KE A L R + Sbjct: 180 GDASDNIPGIKGIGEKTAVKLIEKFGNLENVLQNADSVKGNMGKLLSHGKEQALLSRKLI 239 Query: 233 RLQTDLHIDGNLQQLR 248 L + +D L + Sbjct: 240 ELNRRVPLDYKLGEFE 255 >UniRef50_P52028 DNA polymerase I, thermostable n=18 Tax=Bacteria RepID=DPO1T_THET8 Length = 834 Score = 299 bits (767), Expect = 5e-80, Method: Composition-based stats. Identities = 76/255 (29%), Positives = 132/255 (51%), Gaps = 13/255 (5%) Query: 4 HLLIVDALNLIRR-------IHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENR 54 +L+VD +L R + +G P V +L + + VFD + Sbjct: 13 RVLLVDGHHLAYRTFFALKGLTTSRGEPVQAVYGFAKSLLKALKEDGYKAVFVVFDA--K 70 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + +RH+ YKAGR P PE+ ++ ++ + G G EADD+ ATLA K Sbjct: 71 APSFRHEAYEAYKAGRAPTPEDFPRQLALIKELVDLLGFTRLEVPGYEADDVLATLAKKA 130 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 + G++ I++ D+ QL+S + + + + ++ +++G++P+Q D+ L G Sbjct: 131 EKEGYEVRILTADRDLYQLVSDRVAVLHP-EGHLITPEWLWEKYGLRPEQWVDFRALVGD 189 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIAR 233 S +PGV GIG K+A +LL E+ SLE + +NLD V R+K++ H E L +++R Sbjct: 190 PSDNLPGVKGIGEKTALKLLKEWGSLENLLKNLDRVKPENVREKIKAHLEDLRLSLELSR 249 Query: 234 LQTDLHIDGNLQQLR 248 ++TDL ++ +L Q R Sbjct: 250 VRTDLPLEVDLAQGR 264 >UniRef50_Q2RHE8 DNA polymerase I n=4 Tax=Clostridia RepID=Q2RHE8_MOOTA Length = 885 Score = 299 bits (766), Expect = 7e-80, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 16/260 (6%) Query: 2 AVHLLIVDALNLIRR-IHAVQG--------SPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LL+VD ++I R HA+ + V L + +P + + FD Sbjct: 5 TARLLLVDGNSVIHRAFHALPPLQTREGIRTNAVYGFATMLQKAREMFKPDYIIVAFDHS 64 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R++ +YK RP EL + ++ + G EADDL TL+ Sbjct: 65 KVT--FRNELYDEYKGTRPETDPELRPQFALVKRLLAAWNLASCEVEGYEADDLIGTLSR 122 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 + G + I++ D+ QL+ +++ R Q +D I K +G++P+QL D Sbjct: 123 QGAATGLEVLILTGDRDALQLVGERVKVLLMRRGLSQVEVIDREAIKKNYGLEPEQLIDV 182 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFL 227 L G +S +PGV G+G K+A QL+ ++ LEG+ + + + + L T + A L Sbjct: 183 KALMGDASDNIPGVPGVGEKTAVQLVRQYGDLEGVLAHSGEIKGRRVAENLVTFADQARL 242 Query: 228 CRDIARLQTDLHIDGNLQQL 247 R +A + + +L Sbjct: 243 ARRLATIDCQAPVTLDLAGC 262 >UniRef50_A7NJD5 DNA polymerase I n=2 Tax=Roseiflexus RepID=A7NJD5_ROSCS Length = 972 Score = 299 bits (766), Expect = 7e-80, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 117/264 (44%), Gaps = 22/264 (8%) Query: 5 LLIVDALNLIRR-IHAV--------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDEN 53 LL++D L R HA+ G P V A+ I QP +A FD Sbjct: 8 LLLIDGHALAYRAFHALAEAGLRSSTGEPTYAVYGFTSAMLNAIEEYQPEYAAVAFDV-- 65 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +R +YKA R P E ++ ++ +P ++ G EADD+ TLA + Sbjct: 66 -GKTFRDDLYAEYKANRAETPAEFEQQLERIKQVLAAFDIPIYTAEGYEADDVIGTLARQ 124 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRI-------RDYFQKRWLDAPFIDKEF-GVQPQQL 165 T+ G I++ D QL+ + + R + + + G++P QL Sbjct: 125 ATERGVDVLILTGDTDTLQLVDDHVTVLLNNPYLRGPKNTTRYGVAEVTERYKGLRPHQL 184 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 D GL G S +PGV GIG A LL +F ++E +Y++LD ++++K LE +++A Sbjct: 185 ADLRGLKGDPSDNIPGVKGIGEAGAIALLNQFGTIENLYDHLDEAPKRYQKHLEGQRDIA 244 Query: 226 FLCRDIARLQTDLHIDGNLQQLRL 249 + +A + D + NL L Sbjct: 245 LFSKKLATIVCDAPVTLNLADATL 268 >UniRef50_D0YSZ1 DNA polymerase I n=6 Tax=Actinobacteridae RepID=D0YSZ1_9ACTO Length = 1040 Score = 298 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 18/264 (6%) Query: 1 MAV-HLLIVDALNLIRRIHAVQG-----------SPCVETCQHALDQLIMHSQPTHAVAV 48 M+ LL++D +L R + + V L ++ +PTH A Sbjct: 1 MSDLRLLVLDGHSLAFRAFYSRPPENFRTTTGVYTNAVHGFMSMLLAMLRREKPTHIGAA 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD S +R PDYK GR P E ++ ++ + G+ + EADD+ A Sbjct: 61 FDLSRHS--FRTDIYPDYKGGRAETPPEFLGQIENIQRLLDALGIKWLTMENVEADDILA 118 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIR----DYFQKRWLDAPFIDKEFGVQPQQ 164 TLA + G Q + S D+ QL+ + + + Q + + ++GV P Q Sbjct: 119 TLATQGKAQGMQVLVSSGDRDTFQLIDESTTVLYPGHNAAQTTRMTPQAVKDKYGVWPAQ 178 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 P+ L G + +PGV +G KSA + ++ LEGI + + K + L H + Sbjct: 179 YPEVAALVGEKADNLPGVPLVGEKSAAAWINQYGGLEGILAHRGELKGKRGENLRAHVDD 238 Query: 225 AFLCRDIARLQTDLHIDGNLQQLR 248 R++ RL+TDLH+ L LR Sbjct: 239 VLRNRELNRLRTDLHLPLQLDDLR 262 >UniRef50_D2QFD0 DNA polymerase I n=3 Tax=Bacteria RepID=D2QFD0_9SPHI Length = 1024 Score = 298 bits (764), Expect = 1e-79, Method: Composition-based stats. Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 18/263 (6%) Query: 2 AVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 L ++DAL LI R H + V +A+ +++ +PTH FD Sbjct: 5 TKKLFLLDALALIYRAHFAFSKSPRISSRGINTSAVFGFMNAMIEVLTKEKPTHIGVAFD 64 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 ++ +RH+ P YKA R PE++ MP ++ E +P G EADD+ T+ Sbjct: 65 SAKKT--FRHESFPMYKANRQSQPEDISVAMPYIKQIVEAMHIPMLILDGYEADDIIGTI 122 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYF----QKRWLDAPFIDKEFGVQ-PQQL 165 A K A + +++ DK Y QL+ + I L + + + ++ +Q+ Sbjct: 123 AKKAALADFEVYMMTPDKDYGQLVEEHIHIYKPAFMGKPAEKLGVTEVLERWQIERIEQV 182 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 D GL G S +PG+ GIG K+A +L+ +F S+E + D + K ++ + + Sbjct: 183 TDMLGLMGDSVDNIPGIPGIGEKTAQKLIADFGSVENLIARADELKGKLKENVVNFAQQG 242 Query: 226 FLCRDIARLQTDLHIDGNLQQLR 248 + +++A + D+ + + + LR Sbjct: 243 LMSKELATIHLDVPVPFDEEHLR 265 >UniRef50_UPI0001976BF8 DNA polymerase I n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976BF8 Length = 943 Score = 298 bits (763), Expect = 1e-79, Method: Composition-based stats. Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 17/259 (6%) Query: 4 HLLIVDALNLIRRIH-----------AVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LL+VD +L R A Q + V L Q++ +P H FD + Sbjct: 15 TLLVVDGHSLAFRAFFALPAENFSTQAGQATNAVWGFATMLSQVLDSEKPDHLAVAFDMK 74 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R++ LP YK R PE+L ++P ++ GV G E DD+ ATLA Sbjct: 75 GGT--FRNEMLPQYKGTREAAPEDLLTQLPLIQKMLTALGVTYVEKQGYEGDDIIATLAA 132 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIR----DYFQKRWLDAPFIDKEFGVQPQQLPDY 168 ++G+ ++S D+ QL+ + + + + + ++ ++ V P Q PD Sbjct: 133 MGERSGYDTLVLSGDRDAFQLIDERVTVLYPGHHFKDLKHMTPQAVEDKYHVGPAQYPDL 192 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G ++ +PGV G+G A + + ++ LEGI E+ D + K + L + E L Sbjct: 193 AALRGETADNIPGVPGVGDGFAAKWINQYGGLEGIIEHADEIGGKKGESLRENIEQVKLN 252 Query: 229 RDIARLQTDLHIDGNLQQL 247 R + L+ D+ + ++ L Sbjct: 253 RKVNALRRDVDLGIGIEDL 271 >UniRef50_Q4JW27 DNA polymerase I n=2 Tax=Corynebacterium jeikeium RepID=Q4JW27_CORJK Length = 859 Score = 298 bits (763), Expect = 1e-79, Method: Composition-based stats. Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 18/262 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 MA LL++D +L R Q + V L+ QPTH A F Sbjct: 1 MA-KLLLLDGHSLAFRAFYALPAANFSTVGGQHTNAVYGFLGMFLTLMDKEQPTHVAAAF 59 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +R + P+YKA RP PEE ++ +R E GV EADD+ AT Sbjct: 60 DLSGPT--FREESFPEYKAQRPSTPEEFKGQIELIRRTLEALGVTTLDKESYEADDIIAT 117 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQL 165 LA + + G I + D+ QL++ + + + +++++GV P Q Sbjct: 118 LATEGAKDGMDVLICTGDRDSLQLVTEDVTVLYTLKGVSELHRFTPQAVEEKYGVTPTQY 177 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 PD L G +S +PGV G+GPK+A + + ++ SL+G+ +N+D + K L + + Sbjct: 178 PDLAALRGDTSDNMPGVPGVGPKTAQKWIAKYGSLQGVIDNMDDIGGKVGANLRENIDNV 237 Query: 226 FLCRDIARLQTDLHIDGNLQQL 247 L RDI + DL + +L L Sbjct: 238 VLARDITEMVRDLKLVDDLDAL 259 >UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QY72_9DELT Length = 914 Score = 298 bits (763), Expect = 1e-79, Method: Composition-based stats. Identities = 85/257 (33%), Positives = 131/257 (50%), Gaps = 12/257 (4%) Query: 3 VHLLIVDALNLIRRIH---------AVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L ++D I R + A Q + V L ++I P + +D + Sbjct: 5 EPLYLIDGSAYIYRAYHAIRPLSNAAGQPTHAVYGFTTTLLRVIREKTPRYLAIAYD--S 62 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH+ P YKA RP MP +L ++P ++ + +G EADDL A A + Sbjct: 63 KGPNFRHEIYPAYKANRPEMPADLACQIPYIKEVVSAYHITTLEQAGVEADDLIAAAARR 122 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 + IVS DK QL++ + + D Q ++D + K++ V PQQL DY+ L G Sbjct: 123 LAGPDQPLIIVSGDKDLLQLVNEWVTLWDPMQDTFMDPAAVAKKYQVSPQQLLDYFALIG 182 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDIA 232 SS VPGV G+GPK+A +L+ +F SLE ++ NL+ V A K R+KL H++ A L R + Sbjct: 183 DSSDNVPGVPGVGPKTAAKLIDQFGSLEQLFANLEQVSAAKLREKLAAHRQDAQLARRLI 242 Query: 233 RLQTDLHIDGNLQQLRL 249 RL+ DL + +L L Sbjct: 243 RLKDDLELPTSLDDYTL 259 >UniRef50_B1BYY4 DNA polymerase I n=4 Tax=Bacteria RepID=B1BYY4_9FIRM Length = 873 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 117/262 (44%), Gaps = 20/262 (7%) Query: 3 VHLLIVDALNLIRRIHAVQG-------------SPCVETCQHALDQLIMHSQPTHAVAVF 49 L+++D +L+ R + + V + L+ ++ P + V F Sbjct: 5 KELVLIDGNSLLYRAYYATAAMGNLMVNKDGIPTNAVYGFANMLENILKG-NPEYIVVAF 63 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D ++ +R+ YK R P+EL + +R G+ G E DD+ T Sbjct: 64 DYGKKT--FRNDLFEVYKGTRSATPDELVCQFSMIREYLTAHGIHYQEIEGYEGDDVIGT 121 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQL 165 +A ++ + +IV++DK QL+ + + + + + +G+ P Q+ Sbjct: 122 IASIASKKRFKVSIVTSDKDMLQLVDDNVSVYLTKKGVAELEKITPEKFKEMYGLIPDQM 181 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 D GL G + +PG+ G+G K+A +LL ++ ++E + ++LD + K +K+ + + Sbjct: 182 RDLKGLMGDKADNIPGIPGVGEKTALKLLKQYHTIENLNDHLDELKGKMGEKIRDNIDQG 241 Query: 226 FLCRDIARLQTDLHIDGNLQQL 247 L + IA + D+ ++ +L Sbjct: 242 LLSKKIATIIKDVPMELDLDDF 263 >UniRef50_A9NF42 DNA polymerase I n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF42_ACHLI Length = 880 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 125/265 (47%), Gaps = 21/265 (7%) Query: 3 VHLLIVDALNLIRRIHAVQG--------------SPCVETCQHALDQLIMHSQPTHAVAV 48 + +VD +++ R + + V +D++I S +H + Sbjct: 2 KKITLVDGNSILFRAYNATAYPGAKVLQTSTGIYTNAVFAFSGMIDKIIEISN-SHMLIA 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + RH+ DYKAGR MPEEL ++P + + G+ +S +G EADD+ Sbjct: 61 FDTGEPT--HRHKSYDDYKAGRKEMPEELGSQIPLIHELIKYLGIKEYSMAGYEADDIIG 118 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQ 164 TLA +AG++ + S+D QL++ + + + + + +G + Sbjct: 119 TLAKMAEKAGYKVDVFSSDYDLLQLVTEHITVHMLKKGMRVVETYTPETLKETYGFSHEL 178 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 D+ L G S +PGV G+G +A +L+ E+ +LE I N + + K + + T+KE Sbjct: 179 FIDFKALVGDKSDNIPGVPGVGEVTAKKLIAEYGTLENILNNAEHIKGKLGENIRTNKEQ 238 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 A ++++ + TD+ + +L+ ++ Sbjct: 239 AVFSKELSTILTDMPLPFDLEDTKV 263 >UniRef50_C8NZ98 DNA polymerase I n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ98_ERYRH Length = 833 Score = 297 bits (762), Expect = 2e-79, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 124/262 (47%), Gaps = 20/262 (7%) Query: 4 HLLIVDALNLIRRIHA---VQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 LL++D +++ R + +G + V L + I PTH + FD Sbjct: 3 KLLLIDGNSMLFRAYYGTLSRGYMKSSSGVVTNAVYGFSTMLAKAIEIINPTHVLVAFDT 62 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++++ +RH +YK R + EEL + +R + + + SG EADD+ T++ Sbjct: 63 KDKT--FRHDMFDEYKGTRKEVDEELVSQFALVREFLDAYPIKRFELSGYEADDIIGTMS 120 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 + I+++D+ QL+ + + + R +D + E G++P+Q+ D Sbjct: 121 RMYPD--FKVEILTSDRDMLQLIDDNVDVLLMKKGLTDLRLMDKTSLMDEMGIEPKQIVD 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 L G +S +PGV IG K+A +LL ++ + E +Y + + + K +K+ +E A + Sbjct: 179 MKALMGDTSDNIPGVPSIGEKTALKLLGQYTTFENLYVHKEEIKGKMGEKIREFEEQARM 238 Query: 228 CRDIARLQTDLHIDGNLQQLRL 249 +A + T + +D +L ++ Sbjct: 239 SYKLAEIHTSVPLDIDLSSIKY 260 >UniRef50_C4Z0G0 DNA polymerase I n=23 Tax=Bacteria RepID=C4Z0G0_EUBE2 Length = 894 Score = 297 bits (762), Expect = 2e-79, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 120/264 (45%), Gaps = 18/264 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ L+++D +++ R + + + L + + +P + FD Sbjct: 1 MSEKLILIDGHSILNRAFYGVPDLTNAEGIHTNAMYGFLNILFKFLDEEKPDYITVAFDL 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH+ YK R PM EL ++P ++ + + G EADD+ T+A Sbjct: 61 SAPT--FRHKVFDGYKGTRKPMQPELKQQVPLMKELLKAMNITVVEQEGYEADDILGTIA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDA------PFIDKEFGVQPQQL 165 + G +IVS D+ QL ++IR K+ + + +GV P + Sbjct: 119 KESAAKGIDVSIVSGDRDLLQLADEHIKIRIPKTKKGVTEVEDYYPSDVFNLYGVTPHEF 178 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEM 224 D L G +S +PG G+GPK+A+ ++ ++ SL+ ++E+L + K + + + E Sbjct: 179 IDVKALMGDTSDNIPGAPGVGPKTASAIIQKYHSLDNVFEHLCELKPPKAKISITENVEQ 238 Query: 225 AFLCRDIARLQTDLHIDGNLQQLR 248 + R ++ ++ D+ ID ++ + Sbjct: 239 IKMSRFLSEIKIDVPIDYKVEDSK 262 >UniRef50_B0PCZ2 DNA polymerase I n=3 Tax=Clostridiales RepID=B0PCZ2_9FIRM Length = 874 Score = 297 bits (761), Expect = 2e-79, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 120/264 (45%), Gaps = 19/264 (7%) Query: 2 AVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 AV LL VD +++ R + + + L +++ ++P FD Sbjct: 6 AVKLLAVDGNSILNRAYYGIKALTTKNGEFTNGIYGFLSILLRVLDEAEPDAVAVAFDL- 64 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 R+ +RH+ YKA R MP EL ++ L+ G + G EADD+ TLA Sbjct: 65 -RAPTFRHKLYDGYKAQRKGMPHELASQLEPLKELLGALGFQIVTCEGYEADDILGTLAR 123 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW------LDAPFIDKEFGVQPQQLP 166 + G I + D+ QL+ P + +R K D + +++GV+P QL Sbjct: 124 SSAETGWDCVIATGDRDSLQLVGPHVSVRLATTKMGQPASTLYDETAVREKYGVEPAQLV 183 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD--AVAEKWRKKLETHKEM 224 D L G +S +PGVAGIG K+A L+ ++ ++ IY LD + RKKL KEM Sbjct: 184 DVKALMGDASDNIPGVAGIGEKTALSLIGQYHDIDAIYAQLDTLEIKPGVRKKLGEGKEM 243 Query: 225 AFLCRDIARLQTDLHIDGNLQQLR 248 A+ R + + D ID + R Sbjct: 244 AYTSRKLGEICCDAPIDASPAAYR 267 >UniRef50_C0X9C1 Possible DNA polymerase I (Fragment) n=1 Tax=Enterococcus faecalis TX0104 RepID=C0X9C1_ENTFA Length = 428 Score = 296 bits (760), Expect = 3e-79, Method: Composition-based stats. Identities = 74/265 (27%), Positives = 131/265 (49%), Gaps = 21/265 (7%) Query: 2 AVHLLIVDALNLIRRIHAVQG-------------SPCVETCQHALDQLIMHSQPTHAVAV 48 LL+VD ++ R + + + + ++ PTH + Sbjct: 3 KKKLLLVDGNSVAFRAFFALHNSLERFKNKNGLHTNAIYAFNNMFENVMQKEMPTHVLVA 62 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + +R + +YKAGR P E ++MP +R E GV + EADD+ Sbjct: 63 FDAGK--TTFRTEFYSEYKAGRSKTPGEFKEQMPYIRELLEGLGVKYYELPNYEADDIIG 120 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEF-GVQPQ 163 TLA KV + + ++S D+ QL + T+++ + I +++ G+ P+ Sbjct: 121 TLANKVDKDEYDVVVLSGDRDLTQLATDTVKVDITVKGVSDIESYTPEHIAEKYDGLTPK 180 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHK 222 Q+ D GLAG +S +PGV IG K+A +LL ++ S+EG+YEN+D + + K ++ L K Sbjct: 181 QIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVYENIDEMKKSKMKENLINDK 240 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQL 247 E AFL + +A ++ + ++ N++ L Sbjct: 241 EQAFLSKRLATIEVNAPVEVNVEDL 265 >UniRef50_C5CBM1 DNA polymerase I n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5CBM1_MICLC Length = 937 Score = 296 bits (760), Expect = 3e-79, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 17/263 (6%) Query: 2 AVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 LL++D ++ R Q + V L +I +PTH FD Sbjct: 10 PQRLLVLDGHSMAFRAFYALPAENFATDTGQHTNAVYGFTAMLLTMIRQQRPTHVAVAFD 69 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +R + +YKAGR P E ++ E G+P + G EADD+ ATL Sbjct: 70 LSGPT--FRSEEYAEYKAGRSETPAEFAGQIELTVKVMEALGIPTLTLEGYEADDIVATL 127 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW----LDAPFIDKEFGVQPQQLP 166 + + +AG +A +VS D+ QL+S + + +DA + ++GV P Q P Sbjct: 128 SARAEEAGWEAVVVSGDRDAFQLISERTTVLYPKKGVSDIPPMDADAVLAKYGVAPAQYP 187 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 + L G ++ +PGV G+GP A + L ++ L+G+ + + K + L H E Sbjct: 188 ELAALVGEAADNLPGVPGVGPGFAAKWLKQYGDLDGVLAHAHEITGKKGEALREHLEDVR 247 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 R + L DL + L+ +RL Sbjct: 248 RNRRLNALVRDLDLPIGLEAMRL 270 >UniRef50_C4FFL7 Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=C4FFL7_9BIFI Length = 982 Score = 296 bits (760), Expect = 3e-79, Method: Composition-based stats. Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 17/259 (6%) Query: 4 HLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LL+VD +L R Q + V L Q+I +P H FD + Sbjct: 12 TLLVVDGHSLAFRAFFALPVENFSTSSGQATNAVWGFATMLAQVIDAEKPDHLAVAFDVK 71 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R+ LP YK R PE+L ++P +++ + GV G E DD+ TLA Sbjct: 72 GGT--FRNTMLPQYKGTRDAAPEDLLSQLPLIQSMLDALGVTYIEKPGYEGDDVIGTLAT 129 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIR----DYFQKRWLDAPFIDKEFGVQPQQLPDY 168 QA ++ ++S D+ QL+ + + + + + + ++ V P Q PD Sbjct: 130 MGEQAKYKTLVLSGDRDAFQLVDDWVTVLYPGHHFKDLKHMTPEAVFAKYKVTPAQYPDL 189 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G ++ +PGV G+G A + + ++ SLEGI E+ D + K + L + + L Sbjct: 190 AALRGETADNIPGVPGVGDGFAAKWINQYGSLEGICEHADEIGGKKGESLRENLDQVKLN 249 Query: 229 RDIARLQTDLHIDGNLQQL 247 R + L D+ + + L Sbjct: 250 RKVNALVRDIDLGVTVDDL 268 >UniRef50_Q2JCJ5 DNA polymerase I n=10 Tax=Actinomycetales RepID=Q2JCJ5_FRASC Length = 945 Score = 296 bits (760), Expect = 3e-79, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 17/263 (6%) Query: 2 AVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 LL++D +L R Q + V L ++ +PTH +D Sbjct: 57 TPRLLLLDGHSLAYRAFYALPVENFSTTTGQPTNAVYGFTSMLINVLRDERPTHVAVAWD 116 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +RH + +YKAGR P + ++ + + VP S G EADD+ ATL Sbjct: 117 LP--TPTFRHTQYAEYKAGRGETPADFVGQVSLIHQVCDALAVPGVSAPGYEADDVIATL 174 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLP 166 A G +V+ D+ QL+ + + + + ++G+ P Q P Sbjct: 175 ATLGAAEGMDVLVVTGDRDALQLVDERVTVLMTRKGISDMVRFTPDEVQAKYGLSPVQYP 234 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D+ L G S +P V G+G K+AT+ + +F SL + ++ D + K L H Sbjct: 235 DFAALRGDPSDNLPSVPGVGEKTATKWIQQFGSLAELVDHADEIGGKTGASLRAHLSEVI 294 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 R + L D+ +D LR+ Sbjct: 295 RNRSLTELSRDVPLDVVPAGLRM 317 >UniRef50_C7HT94 DNA polymerase I n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HT94_9FIRM Length = 893 Score = 296 bits (759), Expect = 5e-79, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 130/264 (49%), Gaps = 16/264 (6%) Query: 1 MAVHLLIVDALNLIRR-------IHAVQG--SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ ++++D +LI R + G + V + + +P + + FD Sbjct: 15 MSKKVMLIDGSSLIFRAFFALPNLTNADGVMTNGVYGFLTMYFRAVEEYKPDYILVAFD- 73 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ +RH+ DYKA R P EL+ + L+ + V G EADD+ T + Sbjct: 74 -KKTKTFRHKEFEDYKANRDKAPNELNYQFGILKDILDSLNVKYLDIDGYEADDIVGTFS 132 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 + G + I++ DK Y QL++ + + + + I+ ++G+ P+QL D Sbjct: 133 TIAKEEGLETVIITGDKDYFQLVNDKVVVFLTRKGISQMEEITVKSIEDDYGLSPKQLID 192 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW-RKKLETHKEMAF 226 GL G S +PGV GIG K+A + + ++ S+EG+YENLD + K ++ LE K++AF Sbjct: 193 VKGLMGDKSDNIPGVDGIGEKTAIKFIKKYGSMEGLYENLDDIKGKKTKENLENSKQIAF 252 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 L + I + T+ + + +L++ Sbjct: 253 LSKKIGTIVTNAPVGMKISELKVK 276 >UniRef50_P59200 DNA polymerase I n=187 Tax=Firmicutes RepID=DPO1_STRR6 Length = 877 Score = 296 bits (758), Expect = 6e-79, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 118/264 (44%), Gaps = 20/264 (7%) Query: 2 AVHLLIVDALNLIRRIH-------------AVQGSPCVETCQHALDQLIMHSQPTHAVAV 48 LL++D ++ R A + + Q L L+ +P+H + Sbjct: 3 KKKLLLIDGSSVAFRAFFALYQQLDRFKNAAGLHTNAIYGFQLMLSHLLERVEPSHILVA 62 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + +R + DYK GR P+E ++ P +R + G+ + + EADD+ Sbjct: 63 FDAGK--TTFRTEMYADYKGGRAKTPDEFREQFPFIRELLDHMGIRHYELAQYEADDIIG 120 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQ 164 TL Q G TIVS DK QL + + + ++ +E G+ P Q Sbjct: 121 TLDKLAEQDGFDITIVSGDKDLIQLTDEHTVVEISKKGVAEFEAFTPDYLMEEMGLTPAQ 180 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKE 223 D L G S +PGV +G K+ +LL+E SLEGIYEN+D + K ++ L KE Sbjct: 181 FIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEHGSLEGIYENIDGMKTSKMKENLINDKE 240 Query: 224 MAFLCRDIARLQTDLHIDGNLQQL 247 AFL + +A + T I L+ L Sbjct: 241 QAFLSKTLATIDTKAPIAIGLEDL 264 >UniRef50_Q1JIU7 DNA polymerase I n=14 Tax=Streptococcus RepID=Q1JIU7_STRPD Length = 880 Score = 296 bits (758), Expect = 6e-79, Method: Composition-based stats. Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 22/266 (8%) Query: 2 AVHLLIVDALNLIRRI-------------HAVQGSPCVETCQHALDQLIMHSQPTHAVAV 48 LL++D ++ R H+ + + LD ++ QPTH + Sbjct: 4 KNKLLLIDGSSVAFRAFFALYNQIDRFKNHSGLHTNAIYGFHLMLDHMMKRVQPTHVLVA 63 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + +R + DYKAGR P+E ++ P +R G+ + EADD+ Sbjct: 64 FDAGK--TTFRTEMYADYKAGRAKTPDEFREQFPYIREMLTALGIAYYELEHYEADDIIG 121 Query: 109 TLAVKVT--QAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQP 162 TL + TIVS DK QL + + + ++ ++ G+ P Sbjct: 122 TLDKMAERTEVPFDVTIVSGDKDLIQLTDENTVVEISKKGVAEFEEFTPAYLMEKMGLTP 181 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETH 221 Q D L G S +PGV IG K+ +LL EF SLEGIYE++D K ++ L Sbjct: 182 NQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSLEGIYEHIDGFKASKMKENLIND 241 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQL 247 ++ AFL + +A + T I L + Sbjct: 242 RDQAFLSKTLATINTASPITIGLDDI 267 >UniRef50_A9ITV6 DNA polymerase I n=89 Tax=Proteobacteria RepID=A9ITV6_BORPD Length = 948 Score = 296 bits (758), Expect = 6e-79, Method: Composition-based stats. Identities = 73/253 (28%), Positives = 120/253 (47%), Gaps = 11/253 (4%) Query: 1 MAVHLLIVDALNLIRR-IHA------VQGSP--CVETCQHALDQLIMHSQPTHAVAVFDD 51 M LL+VD + + R HA QG P + + L +L+ + +A +FD Sbjct: 44 MNKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVSDHKADYAACIFDA 103 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ +R PDYK+ RPPMPE+L ++ + A G + G EADD+ TLA Sbjct: 104 RGKT--FRDDLYPDYKSHRPPMPEDLAAQIEPIHQAVRALGWQVLAIEGVEADDIIGTLA 161 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + + G + + + DK QL+ + + + LD + +FGV P ++ DY L Sbjct: 162 CQASGMGIRTIVSTGDKDLAQLVDANVTLVNTMSGEVLDETGVRNKFGVPPDRIVDYLML 221 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G + VPGVA +GPK+A + L EF S++ + E D + L L R + Sbjct: 222 VGDAIDNVPGVAKVGPKTAAKWLAEFGSIDSLVEQADGIKGVAGNNLREAIGQFPLTRQL 281 Query: 232 ARLQTDLHIDGNL 244 ++ D + G++ Sbjct: 282 LTVKCDCDLAGHI 294 >UniRef50_A8R8A1 DNA polymerase I n=2 Tax=unclassified Erysipelotrichaceae RepID=A8R8A1_9FIRM Length = 861 Score = 296 bits (758), Expect = 7e-79, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 126/262 (48%), Gaps = 20/262 (7%) Query: 3 VHLLIVDALNLIRRIHAVQ------------GSPCVETCQHALDQLIMHSQPTHAVAVFD 50 LL++D +++ R + + V +++ + P + +D Sbjct: 2 EKLLLIDGNSMLFRAYYATLYGRMMTTSNGIPTNAVYGFITMVNKALDMIDPDYVFVAWD 61 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +RH +YK R + +EL + P +R + G+ + G EADD+ ++ Sbjct: 62 AGKPT--FRHTTYKEYKGTRKELDKELIVQFPIVREYLDAAGIKRYECEGIEADDIIGSI 119 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLP 166 A + I+S+D+ QL+ PT + + +D + + + + PQQ+ Sbjct: 120 AKQ--HPELAIHILSSDRDLLQLIDPTTDVYLMKKGISEIEVMDEAQLMETYTLCPQQII 177 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D L G S+ +PGV GIG K+A +LL E+QS++ +YE++ + K ++KLE KE AF Sbjct: 178 DLKALMGDSADNIPGVKGIGEKTAIKLLKEYQSVDNVYEHIAEIKGKLKEKLENGKESAF 237 Query: 227 LCRDIARLQTDLHIDGNLQQLR 248 L + +A ++TD I +++ + Sbjct: 238 LSKFLATIKTDAKIPVDMKTCK 259 >UniRef50_B0S404 DNA polymerase I n=2 Tax=Finegoldia magna RepID=B0S404_FINM2 Length = 875 Score = 295 bits (757), Expect = 7e-79, Method: Composition-based stats. Identities = 68/267 (25%), Positives = 134/267 (50%), Gaps = 19/267 (7%) Query: 1 MAVHLLIVDALNLIRR-IHAVQ--------GSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ LI+D +L+ R +A++ + V + ++ P V FD Sbjct: 1 MSKKALIIDGSSLLFRGFYAIRDLTTKDGIHTNGVFGFMNMYYSVMGKINPDLVVVCFD- 59 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH++ +YK R PEEL + L+ + GV G EADD+A TLA Sbjct: 60 -RKEPTFRHEKYSEYKGNRQETPEELIGQFDMLKELLKAMGVSYIDLKGYEADDIAGTLA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPD 167 + + + +++ DK Y QL+ ++ R + + D + +E+G+ P+Q+ D Sbjct: 119 KQASSKDYDVYLLTGDKDYLQLIDDNTKVVLTKRGITETKIYDVDVLKEEYGITPKQMID 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW-RKKLETHKEMAF 226 GL G S +PG+ G+G K+A + + ++ S+EG+YE++D ++ K ++K+ +++A+ Sbjct: 179 LKGLMGDKSDNIPGIDGVGEKTALKYIQKYGSIEGLYEHVDEISGKKTKQKVIDGEDIAY 238 Query: 227 LCRDIARLQTDLH---IDGNLQQLRLV 250 L R++ + TD+ + ++ + Sbjct: 239 LSRELGTINTDVPEDLMGFGIEDCTIK 265 >UniRef50_B1WPN5 DNA polymerase I n=13 Tax=Bacteria RepID=B1WPN5_CYAA5 Length = 970 Score = 295 bits (757), Expect = 7e-79, Method: Composition-based stats. Identities = 71/272 (26%), Positives = 128/272 (47%), Gaps = 28/272 (10%) Query: 5 LLIVDALNLIRRIHAV------------QGSPCV--ETCQHALDQLIMHSQPTHAVAVFD 50 L+++D +L R + G P ++L Q I P + FD Sbjct: 10 LMLIDGHSLAFRAYYAFAKARKGPLRTSTGIPTSVCFGFLNSLIQAIKLENPQYIAIAFD 69 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 ++ +RH+ +YKA R PE+ ++ L+ E + + G EADD+ T+ Sbjct: 70 --SKEPTFRHEADVNYKADRKETPEDFIPDILNLQRLLEALNITIITAPGYEADDVLGTV 127 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR------------WLDAPFIDKEF 158 A K +Q G++ IVS D+ QL++ + + +R + + ++ Sbjct: 128 ATKGSQEGYRVKIVSGDRDLFQLVNDDNHLSVLYLERNAVKSSSGEGYTEFNVEAVTEKM 187 Query: 159 GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL 218 G++P Q+ DY L G S +PGV GIG K+A +LL E+ +LE +Y N++ + +KKL Sbjct: 188 GIKPTQVIDYKALCGDKSDNIPGVRGIGEKTAVKLLSEYGTLEAVYNNIEEIKGANQKKL 247 Query: 219 ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 + K+ A + +A + TD ++ +++ L Sbjct: 248 KEGKKEAEHSQYLAEIVTDAPLEFQIERCELK 279 >UniRef50_O67550 5'-3' exonuclease n=2 Tax=Aquificaceae RepID=EX53_AQUAE Length = 289 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 14/258 (5%) Query: 3 VHLLIVDALNLIRR-------IHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L I+D + + R + +G P + L LI +P + V VFD Sbjct: 2 KTLYILDGSSFVYRSFFALPPLSTSKGFPTNAIYGFLRMLFSLIKKERPQYLVVVFDAPA 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ R + DYK RP P+ L ++P ++ + G+P G EADD+ A LA K Sbjct: 62 KTK--REKIYADYKKQRPKAPDPLKVQIPVIKEILKLAGIPLLELPGYEADDVIAYLAEK 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 +Q G + I S DK QL+S + + + + K+FGV+PQ++PDY L G Sbjct: 120 FSQKGFKVKIYSPDKDLLQLVSENVLVINPMNDEVFTKERVIKKFGVEPQKIPDYLALVG 179 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR 233 VPG+ G+GPK+A +L ++ S+E I +N + R+ KE L + + Sbjct: 180 DKVDNVPGIEGVGPKTAINILKKYGSVENILKNWEKF---QREFPRAKKEDLELSYKLVK 236 Query: 234 LQTDLHIDGNLQQLRLVR 251 L TDL I+ + + L++ R Sbjct: 237 LYTDLDIELSEEDLKIKR 254 >UniRef50_Q1D7R1 DNA polymerase I n=4 Tax=Myxococcaceae RepID=Q1D7R1_MYXXD Length = 908 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 77/256 (30%), Positives = 122/256 (47%), Gaps = 12/256 (4%) Query: 2 AVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 A L+++DA I R + + V + + + +PTH FD E Sbjct: 10 APTLVLIDASGFIFRAYHAIPPLTTSKGVQTNAVLGFTRMVLKALRELKPTHVALAFDKE 69 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +R+ R + P YKA R PE+L + +R E VP +G EADD+ TLAV Sbjct: 70 SRTE--RQKIDPTYKANREGPPEDLVPQFALIRRVVEAINVPVLEVAGWEADDVIGTLAV 127 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 K Q G +V+ DK + Q++ +R+ D + + G++P Q+ DY L Sbjct: 128 KAKQEGFCVQVVTGDKDFVQIVDDDVRLYDPMKDVHTLPADVKARLGIEPGQMRDYLALI 187 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDI 231 G + VP V GIGPK+AT+L+ +F +E + LD V K R+ + +H+E + + Sbjct: 188 GDAVDNVPKVPGIGPKTATELIQQFGDVETLLSRLDEVKKPKIRENIASHRESLLRAKVL 247 Query: 232 ARLQTDLHIDGNLQQL 247 +TDL +D + L Sbjct: 248 VTFKTDLSLDVRMADL 263 >UniRef50_B8I3Y7 DNA polymerase I n=6 Tax=Clostridium RepID=B8I3Y7_CLOCE Length = 896 Score = 294 bits (755), Expect = 1e-78, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 128/266 (48%), Gaps = 25/266 (9%) Query: 3 VHLLIVDALNLIRRIHAVQG--------------SPCVETCQHALDQLIMHSQPTHAVAV 48 +L+VD +++ R A G + V + L + + P + Sbjct: 5 DKILVVDGNSILNR--AFYGLSRAAMLTTSEGLYTNAVFGFINILSKHLQDENPKYVCVA 62 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD ++ +RH+ YKA R MP EL ++P ++ + + G EADD+ Sbjct: 63 FDL--KAPTFRHKEYDQYKAQRKGMPNELAVQVPIIKQVLDAMNIARVEVEGFEADDILG 120 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------RWLDAPFIDKEFGVQP 162 T++ + G + +++ D+ QL S RI+ + D + +++GV P Sbjct: 121 TVSSYAEKQGMKTILLTGDRDSLQLASNYTRIKLPVTRANKTETDEYDYEKVIEKYGVTP 180 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETH 221 QL D GL G +S +PGV GIG K+A L+ +F SLE +YEN+D V +K R+KLE + Sbjct: 181 GQLIDVKGLMGDTSDNIPGVPGIGEKTALALIKKFNSLEELYENIDKVDKKGVREKLENN 240 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQL 247 KE+AF+C+ +A + + NL Sbjct: 241 KELAFMCKRLATIYRKVPGVENLNDF 266 >UniRef50_C2MBR8 DNA polymerase type I n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MBR8_9PORP Length = 948 Score = 294 bits (755), Expect = 1e-78, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 127/265 (47%), Gaps = 20/265 (7%) Query: 1 MAVHLLIVDALNLIRR-IHAVQGSP----------CVETCQHALDQLIMHSQPTHAVAVF 49 M L ++DA LI R +A P + L +I +P + Sbjct: 1 MP-TLYLLDAYALIYRAYYAFINRPLVDAQGRDTSALYGFASTLQDIIDKERPDYIAVAM 59 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH+ P+YKA RP PE + MP ++ + +P G EADDL T Sbjct: 60 DMPGGT--FRHKEYPEYKANRPETPETIRFSMPYIKELVQAYQIPLLGVEGYEADDLIGT 117 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQ-PQQ 164 L+ + +AG++ +V+ DK Y QL+ P ++ + L A I ++G++ P Q Sbjct: 118 LSRQAVEAGYEVRMVTPDKDYGQLVGPHAQMFAPQRTGSGFELLGAEEITAKYGIRYPLQ 177 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + DY GL G SS VPG GIG +A +LL EF ++E IY +D V + KKL KE Sbjct: 178 MIDYLGLVGDSSDNVPGCPGIGKVAAQRLLEEFDTIEDIYARIDQVKPTYAKKLLAAKEQ 237 Query: 225 AFLCRDIARLQTDLH-IDGNLQQLR 248 L R + + TD+ + + Q++ Sbjct: 238 TMLSRHLVTIVTDVPGVTFDPDQMK 262 >UniRef50_C6W4A8 DNA polymerase I n=44 Tax=Bacteria RepID=C6W4A8_DYAFD Length = 963 Score = 294 bits (755), Expect = 1e-78, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 18/262 (6%) Query: 4 HLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L ++DA+ LI R H + V + L +++ +PTH FD Sbjct: 7 KLFLLDAMALIYRAHFAFIKAPRITSKGLNTSAVFGFTNTLLEVLQKEKPTHIGVAFDTA 66 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH + YKA R PE++ +P ++ +P G EADD+ T+A Sbjct: 67 APT--FRHVQFEAYKAQREAQPEDITVAIPLVKRLLRGMCIPILELDGYEADDIIGTIAK 124 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYF----QKRWLDAPFIDKEFGVQ-PQQLPD 167 + ++ G + +++ DK Y QL+ + I L I + +Q Q+ D Sbjct: 125 EASREGFEVYMMTPDKDYGQLVEQYIHIYKPAFLGKGAEVLGVQQILDRWQIQRIDQVID 184 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 GL G + +PG+ G+G K+A +L+ E+ ++E + + + K +K+ + + A L Sbjct: 185 ILGLMGDAVDNIPGIPGVGEKTAQKLIQEYDTIENLITHAGEIKGKLGEKIRENFDKAVL 244 Query: 228 CRDIARLQTDLHIDGNLQQLRL 249 + +A + + + + + L + Sbjct: 245 SKQLATIDCKVPVPFDAEDLTI 266 >UniRef50_O08307 DNA polymerase I n=4 Tax=Chloroflexi (class) RepID=DPO1_CHLAA Length = 942 Score = 294 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 22/268 (8%) Query: 1 MAVHLL-IVDALNLIRRIHAV---------QGSP--CVETCQHALDQLIMHSQPTHAVAV 48 MA LL +VD L R +G P V L + +P +A Sbjct: 1 MAYPLLVLVDGHALAYRAFFALRESGLRSSRGEPTYAVFGFAQILLTALAEYRPDYAAVA 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD +R +YKAGR PEE + + ++ + +P ++ G EADD+ Sbjct: 61 FDVGR---TFRDDLYAEYKAGRAETPEEFYPQFERIKQLVQALNIPIYTAEGYEADDVIG 117 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI--RDYFQKR----WLDAPFIDKEF-GVQ 161 TLA + T+ G I++ D QL++ +R+ + + + D + K + G++ Sbjct: 118 TLARQATERGVDTIILTGDSDVLQLVNDHVRVALANPYGGKTSVTLYDLEQVRKRYDGLE 177 Query: 162 PQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETH 221 P QL D GL G +S +PGV GIG K A LL +F+SL+ + E +DA ++++ L Sbjct: 178 PDQLADLRGLKGDTSDNIPGVRGIGEKGAIALLKQFRSLDALLEQIDAAPKRYQTLLREQ 237 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLRL 249 E A R +A + TD+ + +L+ R+ Sbjct: 238 AEAARFSRQLATIVTDVPVQLDLEAARI 265 >UniRef50_B5YG86 DNA polymerase I n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG86_THEYD Length = 838 Score = 294 bits (753), Expect = 2e-78, Method: Composition-based stats. Identities = 69/258 (26%), Positives = 126/258 (48%), Gaps = 13/258 (5%) Query: 5 LLIVDALNLIRR-IHAVQG--------SPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 + +VD I R HA++G + + L +L+ + + FD + + Sbjct: 4 IYLVDGSCFIYRAYHAIKGLSTSRGIPTNAIYGFTRMLLKLLREKNVKYILCAFDSPHPT 63 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 RH+ +YK RP P++L ++ ++ + G+ G EADD+ AT + Sbjct: 64 K--RHKIYEEYKITRPETPKDLPVQIDYIKQIIDALGITRIEVPGYEADDIIATAVGVIN 121 Query: 116 Q-AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 Q A I+S DK QL+S ++I D + +D ++ K++GV P++L D+ L G Sbjct: 122 QFAPLNFIIISIDKDMLQLVSDNVKIYDPINELIIDREYVIKKYGVPPEKLNDFMALVGD 181 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIAR 233 + +PGV GIG K+A L+ + S+E I +NLD + K ++ + + L +++ Sbjct: 182 AIDNIPGVKGIGEKTAANLIKRYGSIENILKNLDIIKPLKVSDIIKKNIKSLQLSKELVI 241 Query: 234 LQTDLHIDGNLQQLRLVR 251 L+ D I+ L L++ + Sbjct: 242 LRKDTPIEIKLDDLKIKQ 259 >UniRef50_A8USN7 DNA polymerase I 3'-5' exo domain n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8USN7_9AQUI Length = 291 Score = 294 bits (753), Expect = 2e-78, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 14/254 (5%) Query: 5 LLIVDALNLIRR-------IHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 + ++DA + I R + G P + AL ++ +P + V VFD + Sbjct: 6 IYLIDASSFIYRGFFALPPLTTKDGFPTGAIYGFLRALLSIMKSERPEYLVVVFDHPAPT 65 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 R +YKAGRP MP+ L ++P ++ G+P G EADDL A LA + + Sbjct: 66 K--RDSLFKEYKAGRPSMPDPLRLQIPVIKELLWLMGIPTLEVEGYEADDLIAILAKRFS 123 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 + G + I + DK QL+S + + + + + +FGV PQ++ DY L G Sbjct: 124 EKGFKVKIYTPDKDMLQLVSENVVVINPMNWEVFNPDKVKDKFGVPPQKVADYLALVGDK 183 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQ 235 VPGV G+GPK+A +L+ +F + I E + + + + +E L + + Sbjct: 184 IDNVPGVRGVGPKTAVKLIEKFGGVPNILERWEEFKKIYPE---AKREELELSYQLVKPM 240 Query: 236 TDLHIDGNLQQLRL 249 TD + + + +L Sbjct: 241 TDAEVSLSDEDFKL 254 >UniRef50_C2BWF0 DNA-directed DNA polymerase n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWF0_9ACTO Length = 932 Score = 293 bits (752), Expect = 3e-78, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 17/262 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQG-----------SPCVETCQHALDQLIMHSQPTHAVAVFD 50 LL++D +L R + + V L +I +PTH A FD Sbjct: 3 KKRLLVLDGHSLAFRAFFSRDPEHFRTSTGVYTNAVHGFFSMLLTMIRAEKPTHIGAAFD 62 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 S +R PDYK GR P E ++ ++ G+ + EADD+ ATL Sbjct: 63 LSRHS--FRTDIYPDYKGGRAETPPEFIGQVENIQKMLSAMGIKWLTEPNVEADDILATL 120 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLP 166 A K T++G + + S D+ QL+S + + R + + + + + V PQQ P Sbjct: 121 ATKGTKSGMEVLVSSGDRDSFQLISDDVTVLYPGRSISETKRMTPQAVKDRYDVWPQQYP 180 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 + L G + +PGV +G K A + E+ SL+ + E+ D + K + L H + Sbjct: 181 EIAALVGEHADNLPGVPLVGEKVAASWINEYGSLDSLLEHRDELKGKRGENLRQHIDDVL 240 Query: 227 LCRDIARLQTDLHIDGNLQQLR 248 R + RL+TDL + +L+ L Sbjct: 241 RNRQLNRLRTDLQLPLSLEDLH 262 >UniRef50_Q5HCC8 DNA polymerase I n=14 Tax=Rickettsiales RepID=Q5HCC8_EHRRW Length = 865 Score = 293 bits (752), Expect = 3e-78, Method: Composition-based stats. Identities = 76/263 (28%), Positives = 129/263 (49%), Gaps = 17/263 (6%) Query: 1 MAVHLL----IVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVA 47 M + L+ I+DA L+ R + G P V + L + I + V Sbjct: 1 MHLTLMSIFTIIDAYGLLFRAYYALPHLSTSNGVPIGGVYGFINMLLKYIEVHTANYLVV 60 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 FD + +RH P YK+ R +PE+L + P LR A + +G EADD+ Sbjct: 61 AFDTGGK--NFRHDIYPQYKSNRIKLPEDLISQFPLLREAVNALNISYEEVAGYEADDVI 118 Query: 108 ATLAVKVTQ-AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLP 166 ATL+ ++ G + T+V++DK QLL + I D + +++ + +FG+ +L Sbjct: 119 ATLSKNYSKFDGIKVTVVTSDKDLLQLLEHNIHIFDPVKNKYIVEDDVQDKFGISSSKLL 178 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMA 225 D+ L G +S +PGV GIG K+A +LL F SL+ + A+ K R+ + +++ A Sbjct: 179 DFLSLTGDTSDNIPGVPGIGIKTAAKLLNNFGSLDNLLSQPHAIEKNKCRESIIKYQDQA 238 Query: 226 FLCRDIARLQTDLHIDGNLQQLR 248 L R + L +++D N+++ R Sbjct: 239 ILSRQLLTLCDTVNLDNNIEKYR 261 >UniRef50_D2RAL7 DNA-directed DNA polymerase n=2 Tax=Gardnerella vaginalis RepID=D2RAL7_GARVA Length = 1025 Score = 293 bits (751), Expect = 4e-78, Method: Composition-based stats. Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 17/259 (6%) Query: 4 HLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LL+VD +L R Q + + L Q++ +P FD + Sbjct: 19 TLLVVDGHSLAFRAFFAISADNFSTRSGQATNSIWGFITMLSQVVKKEKPDRLAIAFDVK 78 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R+ LP YK R P+EL ++P ++ + GV G E DD+ TLAV Sbjct: 79 GGT--FRNTMLPQYKGTRDAAPQELLSQLPIIQQMLKALGVTYIEKPGYEGDDVIGTLAV 136 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIR----DYFQKRWLDAPFIDKEFGVQPQQLPDY 168 + AG++ ++S D+ QL+ + + + + +D + +++ V P+Q PD Sbjct: 137 MGSNAGYRTLVLSGDRDAFQLIDDNITVLYPGQHFKDLKEMDKNAVYEKYHVTPKQYPDL 196 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G ++ +PGV G+G A + + +F SLE I E+ + ++ K + L + + L Sbjct: 197 AALRGETADNIPGVPGVGDGYAAKWINQFGSLENIIEHSNEISGKKGEALRENIDQVRLN 256 Query: 229 RDIARLQTDLHIDGNLQQL 247 R + L DL + + L Sbjct: 257 RKVNALVCDLDLGVTVDDL 275 >UniRef50_Q11NX3 DNA polymerase I n=11 Tax=Bacteria RepID=Q11NX3_CYTH3 Length = 946 Score = 293 bits (751), Expect = 4e-78, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 18/264 (6%) Query: 3 VHLLIVDALNLIRRIH-AVQGSP----------CVETCQHALDQLIMHSQPTHAVAVFDD 51 L ++DA+ LI R H A +P V ++L ++++ +PTH FD Sbjct: 2 KKLFLLDAMALIYRAHFAFSKNPRVTSTGISTGAVFGFTNSLLEILLKEKPTHIGVAFDL 61 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + + +RH +YKA R PE++ +P + E +P G EADD+ T + Sbjct: 62 QGPT--FRHDNFTEYKANRQEQPEDISVAIPYIYRLLEGMNIPILGVPGYEADDIVGTFS 119 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYF----QKRWLDAPFIDKEFGV-QPQQLP 166 G +++ DK Y QL++ + + D + +F + + Q+ Sbjct: 120 KIAPPLGFDVYMMTMDKDYMQLVNEHVFLYRPAYMGNDVEIYDINKVLAKFNIKEVDQVR 179 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D GL G + +PG+ GIG K+A +L+ +F S+E + +N D + K ++ + Sbjct: 180 DILGLQGDTVDNIPGIPGIGEKTAQKLIADFGSVENLIKNADQLKGKQKENVINFAAQGL 239 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 L +++A + ++ I+ + + LR+ Sbjct: 240 LSKELATIHCEVPIEFDEEALRVK 263 >UniRef50_C0E6N1 Putative uncharacterized protein n=1 Tax=Corynebacterium matruchotii ATCC 33806 RepID=C0E6N1_9CORY Length = 893 Score = 293 bits (751), Expect = 4e-78, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 16/251 (6%) Query: 13 LIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQR 62 R +A+ Q + + L L+ QPTH FD + +R + Sbjct: 2 AFRAFYALPTEKFTTSTGQATNAIYGFLSMLATLLHDEQPTHVAVAFDVGR--TTFRTEM 59 Query: 63 LPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQAT 122 PDYKA R P E ++P L+ G+ EADD+ ATLA G + Sbjct: 60 FPDYKAQRDETPPEFISQIPILKNLLTALGITTIEKPNYEADDIIATLATTAQPLGFETL 119 Query: 123 IVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYWGLAGISSSK 178 IV+ D+ QL++ T + + + ++G+ P+Q PD+ L G S Sbjct: 120 IVTGDRDSLQLVNNTTTVLYPMKGVSVIHRFTPQAVQDKYGLTPEQYPDFAALRGDPSDN 179 Query: 179 VPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDL 238 +P + +G K+AT+ +V+ +L + N D + L + L R + + +L Sbjct: 180 LPSIPKVGEKTATKWIVQHGNLTNLLNNADTIKGVVGTNLRERIDQVKLNRQLTEMVKNL 239 Query: 239 HIDGNLQQLRL 249 + +L+L Sbjct: 240 DLTHTPPELKL 250 >UniRef50_B6G9J6 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6G9J6_9ACTN Length = 932 Score = 293 bits (750), Expect = 5e-78, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 123/260 (47%), Gaps = 17/260 (6%) Query: 5 LLIVDALNLIRRIH--------AVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENR 54 + ++D +L+ R A GSP V + +++ P V FD + Sbjct: 14 IAVIDGNSLMHRAFHAVPPTMNAPDGSPTNAVFGFLNMFLKMVDEFSPDGVVCAFDKGHP 73 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 R + LP YKA RPPM L + P ++ VP G E DD+ TLA + Sbjct: 74 KV--RMEMLPQYKAQRPPMDPNLRAQFPMIKELLASLSVPVVELEGWEGDDILGTLARRG 131 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEF-GVQPQQLPDYW 169 AG +V+ D+ QL++ + + + + +D + G+ P+ +PD++ Sbjct: 132 EAAGCDMYLVTGDRDMYQLVTDHVHVVSTRKGLSDIAIMTPESVDDLYHGITPELVPDFY 191 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 GL G SS +PGV GIGPK A+ L+V++ SL+ + + D V K + L H + A + R Sbjct: 192 GLKGDSSDNIPGVPGIGPKKASALIVQYGSLDEVIAHADEVKGKMGESLRAHIDDALVSR 251 Query: 230 DIARLQTDLHIDGNLQQLRL 249 IA + TD ++ +L ++ Sbjct: 252 KIATIMTDAPVECDLDEVSF 271 >UniRef50_C6CWL9 5'-3' exonuclease n=3 Tax=Bacillales RepID=C6CWL9_PAESJ Length = 285 Score = 293 bits (750), Expect = 5e-78, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 128/259 (49%), Gaps = 18/259 (6%) Query: 4 HLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 +LIVD + L+ R Q + + L + QPTH +D Sbjct: 5 KILIVDGMALLFRAFFAQQYSARRMADGTPTNAIYGFMQYLFDAVNQFQPTHVACCWDMG 64 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +++ +R + +YKA RP P++L + ++ G+P G EADD T++ Sbjct: 65 SKT--FRTEMYSNYKANRPEAPDDLIPQFSLVKDIVAALGIPNIGIEGYEADDCIGTVSK 122 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW----LDAPFIDKEFGVQPQQLPDY 168 +++Q I++ D+ QL+ + + + R D F+ ++ G+ P Q+ + Sbjct: 123 QLSQM-AHVYILTGDQDMLQLVEERIHVVIMKKGRGNYAVYDLGFLKEDKGIHPFQVIEM 181 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 GL G +S PGV GIG K+A +LL EF+S++GI NLD+V++ + K+E +M L Sbjct: 182 KGLTGDTSDNYPGVKGIGEKTALKLLQEFESIDGILSNLDSVSKSIKAKIEADLDMLHLS 241 Query: 229 RDIARLQTDLHIDGNLQQL 247 R +AR+ ++ + +L++ Sbjct: 242 RTLARINIEVPVACSLEEC 260 >UniRef50_Q1AUF6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUF6_RUBXD Length = 843 Score = 293 bits (750), Expect = 5e-78, Method: Composition-based stats. Identities = 80/262 (30%), Positives = 133/262 (50%), Gaps = 18/262 (6%) Query: 3 VHLLIVDALNLIRR-IHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 + + ++D +L+ R +A+ + + + +L+ + V+D Sbjct: 12 MRVYLIDGYSLLYRAFYALPQSIATSSGLPTNALYGFTSMVLKLLDSDEELGIGVVWD-- 69 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +R + P+YKA R MPEEL ++ L E +P G EADD+ AT++ Sbjct: 70 GGLPAFRTEVYPEYKAQRSAMPEELRVQLDHLDEILEAMNIPVVRVEGFEADDVLATVSR 129 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 ++ + G + IV+ D+ QL+ +R+ R + + + +E+GV P+Q+PDY Sbjct: 130 RLPE-GVELYIVTGDQDAMQLVDGRVRVLRTTRGVSETKVYGRREVMEEYGVSPEQIPDY 188 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHKEMAFL 227 L G S +PGV GIGPKSA LL F SLE +YE L+ V + R+KLE +E AFL Sbjct: 189 KALVGDPSDNIPGVRGIGPKSAAALLRRFGSLEALYERLEEVEARGTRRKLEEGRENAFL 248 Query: 228 CRDIARLQTDLHIDGNLQQLRL 249 +AR++ D + + ++LR Sbjct: 249 SLRLARMRFDAPVQFDPERLRF 270 >UniRef50_B0MYJ0 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYJ0_9BACT Length = 959 Score = 292 bits (749), Expect = 7e-78, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 17/260 (6%) Query: 3 VHLLIVDALNLIRRIH-AVQGSPC----------VETCQHALDQLIMHSQPTHAVAVFDD 51 L +VDA LI + + A G P V L + P FD Sbjct: 2 KKLFLVDAYALIFKYYYAFMGRPMRNRAGMNTSVVFGFTKFLRDIQKREHPDLLGVAFDP 61 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + S +R + P+YKA R PE++ +P ++ E +P G EADD+ TLA Sbjct: 62 KGGS--FRREIFPEYKANRAETPEDILLSVPYVKRIVEAMCIPVLEVPGYEADDVIGTLA 119 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK---RWLDAPFIDKEFGVQ-PQQLPD 167 K +AG+ +V+ DK Y QL+ +I + I +++G++ PQ + D Sbjct: 120 HKGVEAGYDVFMVTPDKDYGQLVCDNCKIYKQKGNDGIEIVGREAIREKYGIENPQLVRD 179 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 L G +S +PGV GIG K+A +L+ E+ ++E I +N D + + +K+ + L Sbjct: 180 ILALWGDASDNIPGVPGIGEKTACKLVQEWGTVENILQNADRIKSRQGEKIAEWGDKLLL 239 Query: 228 CRDIARLQTDLHIDGNLQQL 247 + + + D+ ID + L Sbjct: 240 AKRLTTICLDVPIDFREEDL 259 >UniRef50_B4U0B7 DNA polymerase I n=5 Tax=Streptococcus RepID=B4U0B7_STREM Length = 899 Score = 292 bits (748), Expect = 8e-78, Method: Composition-based stats. Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 22/266 (8%) Query: 2 AVHLLIVDALNLIRRI-------------HAVQGSPCVETCQHALDQLIMHSQPTHAVAV 48 LL++D ++ R H+ + + LD ++ QPTH + Sbjct: 23 KNKLLLIDGSSVAFRAFFALYNQIDRFKNHSGLHTNAIYGFHLMLDHMMKRVQPTHVLVA 82 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + +R + DYKAGR P+E ++ P +R G+ + EADD+ Sbjct: 83 FDAGK--TTFRTELFADYKAGRAKTPDEFREQFPYIRDMLGALGIAFYELEHYEADDIIG 140 Query: 109 TLAVKVT--QAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQP 162 TL + TIVS DK QL + + + ++ + G+ P Sbjct: 141 TLDKMAERTELPFDVTIVSGDKDLIQLTDANTVVEISKKGVAEFEEFTPAYLMDKMGLTP 200 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETH 221 +Q D L G S +PGV IG K+ +LL E+ SLEGIY+++D+ K ++ L Sbjct: 201 EQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEYGSLEGIYQHVDSFKPSKMKENLLHD 260 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQL 247 KE AFL + +A + T I L+ + Sbjct: 261 KEQAFLSKTLATINTSAPITIGLEDI 286 >UniRef50_B0MR22 DNA polymerase I n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR22_9FIRM Length = 829 Score = 292 bits (748), Expect = 9e-78, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 15/258 (5%) Query: 3 VHLLIVDALNLIRR-IHAVQ--------GSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + LI+D +++ R + ++ + V + L L P FD Sbjct: 1 MGFLIIDGNSILNRAFYGIRVLTNSRGVATNAVTGFMNTLLMLEKDVNPDMIAVAFDL-- 58 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +RH+ YKA R MPE+L ++P ++ G+ G EADD+ T++ Sbjct: 59 KALTFRHKMYDGYKANRKGMPEDLAQQLPYMKKIITAMGITIIEKEGFEADDIIGTVSAA 118 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK--RWLDAPFIDKEFGVQPQQLPDYWGL 171 T+ + D+ QL++ + +R K + I +E+GV P+Q+ + L Sbjct: 119 CADKKIPCTVSTGDRDSFQLVNDYVTVRLAKTKGDIYYTPDVIMEEYGVTPKQMIEVKAL 178 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDA--VAEKWRKKLETHKEMAFLCR 229 G SS +PGV GIG K+A L+ EF S++G+YEN+ + + + R KLE KE ++ R Sbjct: 179 MGDSSDNIPGVPGIGEKTALSLIKEFASVDGVYENIGSTLITKGVRTKLENGKESCYMSR 238 Query: 230 DIARLQTDLHIDGNLQQL 247 +A + ID L Sbjct: 239 QLAEICLTAPIDTELSHY 256 >UniRef50_A8SN89 DNA polymerase I n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=A8SN89_9FIRM Length = 888 Score = 292 bits (748), Expect = 9e-78, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 122/261 (46%), Gaps = 15/261 (5%) Query: 3 VHLLIVDALNLIRR-IHAVQG--------SPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 +L++D +LI R +A++ V + + + PTH FD + Sbjct: 14 KKILLIDGSSLIFRAFYAIRNLTTKDGVFVNGVYGFLNMYYKALELINPTHIFVAFDKGS 73 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +RH DYK R P E+ + L+ V EADD+ T+A Sbjct: 74 KT--FRHNEFADYKGTRDNAPNEITYQFGILKDLLSSMNVNYLELDEYEADDIIGTIAKL 131 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 + G + I + D+ Y QL+ + + + + ++ I +E+ + P+QL D Sbjct: 132 AQKEGFEVDIFTGDRDYLQLVDDNILVYLTKKGISEIKLMNTESILEEYDLSPKQLIDVK 191 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G SS +PGV G+G K+A +L+ E+ +LE +YEN+D + K ++ L K+ A+L R Sbjct: 192 ALQGDSSDNIPGVKGVGEKTALKLIQEYGNLENLYENIDNLKGKLKENLVNEKDKAYLSR 251 Query: 230 DIARLQTDLHIDGNLQQLRLV 250 + + + I+ N++ + Sbjct: 252 YLGEIFLRVPIERNIEDFEIK 272 >UniRef50_Q2GI23 DNA polymerase I n=6 Tax=Rickettsiales RepID=Q2GI23_EHRCR Length = 944 Score = 291 bits (747), Expect = 1e-77, Method: Composition-based stats. Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 13/254 (5%) Query: 7 IVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRSSG 57 I+DA L+ R + G P V + + I + V VFD ++ Sbjct: 6 IIDAYGLLFRAYYALPNLRTSYGLPIGGVYGFINIFLKYIEKHVTDYLVVVFDTGSK--N 63 Query: 58 WRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQ- 116 +RH P+YK RP +P++L + LR A + G EADD+ ATL+ K + Sbjct: 64 FRHNIYPEYKGNRPKLPDDLIPQFSLLREAVNAFNIASEEVVGYEADDVIATLSKKYCKL 123 Query: 117 AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISS 176 G + T+V++DK QLL + I D + ++++ + +FG+ QL D+ L G +S Sbjct: 124 QGVKVTVVTSDKDLLQLLKYNICIFDPIKNKYIEEEDVQSKFGISSNQLLDFLSLTGDAS 183 Query: 177 SKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLCRDIARLQ 235 VPG+ GIG K+A +LL +F SL+ + ++ V K R+ + + + A L R + L Sbjct: 184 DNVPGIPGIGVKTAAKLLNDFGSLDNLLLHVHEVKTNKCRESITQYSDQAILSRQLVTLC 243 Query: 236 TDLHIDGNLQQLRL 249 ++ I G++++ Sbjct: 244 DEVDICGDIEKYSF 257 >UniRef50_B8DUU4 DNA polymerase I n=16 Tax=Bifidobacterium RepID=B8DUU4_BIFA0 Length = 960 Score = 291 bits (747), Expect = 1e-77, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 17/263 (6%) Query: 4 HLLIVDALNLIRR-IHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LL++D +L R +A+ Q + V L Q+I +P FD + Sbjct: 11 TLLVIDGHSLAFRAFYALPAENFSAKDGQATNAVYGFFTMLSQVIASQKPDLLGVAFDVK 70 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R++ L YK R PEEL ++P ++ E GV + G E DD+ ATLA Sbjct: 71 GGT--FRNKMLTQYKGTREAAPEELISQIPLIQDMLEAFGVTYVTKQGYEGDDVIATLAT 128 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 A ++ ++S D+ QL+ + + + + + + ++ ++ V P+Q PD Sbjct: 129 MGEHADYRTYVLSGDRDAFQLIDDDITVLYPGYHFKELKAMTPQAVEDKYHVTPRQYPDL 188 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G ++ +PGV G+G A + + ++ L+G+ E+ D + K L E L Sbjct: 189 AALRGETADNIPGVPGVGDGFAAKWINQYGGLDGVIEHADEIKGKKGDALRESIEQIRLN 248 Query: 229 RDIARLQTDLHIDGNLQQLRLVR 251 R + L DL + ++ L + Sbjct: 249 RKVNALVRDLDLGVDIADLTFGK 271 >UniRef50_D1VS49 DNA polymerase I n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VS49_9FIRM Length = 885 Score = 291 bits (746), Expect = 1e-77, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 130/265 (49%), Gaps = 17/265 (6%) Query: 1 MAVHLLIV-DALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFD 50 M+ ++ ++ D +L R + + L+ I +P+H V FD Sbjct: 1 MSKNIFLIIDGSSLFFRAFYALPLLKTKRGIYTNAIYGFVMMLENAIERVKPSHIVVCFD 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + ++ +R + DYK R P EL + P +R + + + EADD+A TL Sbjct: 61 RKGKT--FRSELYKDYKGTRQKTPNELEQQFPLVRDILKYMNIVVLDSPVYEADDIAGTL 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLP 166 ++ ++ G+++ +++ DK Y QL+ + + ++ I+ ++G+ PQ+ Sbjct: 119 SLIASKEGYKSYLLTGDKDYYQLVDDNTNVLMTRKGITELEVVNLQSINDDYGISPQEFI 178 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMA 225 D GL G SS +PGV GIGPK+ +L+ E+ ++E +Y +L ++ K ++ LE +K A Sbjct: 179 DLKGLMGDSSDNIPGVPGIGPKTGLKLIKEYSTIENLYNHLSEISGKKLKENLEENKVQA 238 Query: 226 FLCRDIARLQTDLHIDGNLQQLRLV 250 F+ + + + ++ + L L++ Sbjct: 239 FMSKKLGTIVRNIDLPVGLSDLKIK 263 >UniRef50_D1Y4U0 DNA polymerase I n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4U0_9BACT Length = 866 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 15/251 (5%) Query: 3 VHLLIVDALNLIRRIH-------AVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDEN 53 +L++D + R A G+P + + ++ +P A FD Sbjct: 6 KKILLIDGHGIAFRAFYAIPELNAPDGTPTNALVGFFNMFARVRHDQRPDEIYAAFDM-- 63 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH+ P+YKA R P PEE ++P L GV EADDL + AV+ Sbjct: 64 KEPTFRHRLYPEYKATRRPTPEEFKIQVPLLHEMLPLLGVHIMERPSVEADDLIGSAAVQ 123 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 G + I+++DK Q+L P ++I + D P +++G P + DY Sbjct: 124 FASRGDEVLILTSDKDIMQVLRPGVKILRPGKGVSSFEEYDVPHFTEKYGFPPDTMVDYL 183 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G S +PGV G+G K+A++LL + S+EGI E+ + +KK+E H A R Sbjct: 184 SLMGDSIDNIPGVPGVGEKTASKLLQSYGSIEGIMEHAGELKPALQKKIEEHGAQAVANR 243 Query: 230 DIARLQTDLHI 240 + RL+ D + Sbjct: 244 KLTRLKCDEDL 254 >UniRef50_A0JWM3 DNA polymerase I n=7 Tax=Actinobacteria (class) RepID=A0JWM3_ARTS2 Length = 955 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 16/259 (6%) Query: 4 HLLIVDALNLIRRIH-----------AVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LL++D ++ R A Q + + L LI +PTH FD Sbjct: 67 RLLVLDGHSMAFRAFFALPADKFSTAAGQHTNAIHGFTSMLINLIKEQKPTHVAVAFDVS 126 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + + R +YK GR P E+ ++ + G+ G EADD+ ATLA Sbjct: 127 DET-THRKAEYSEYKGGRNETPREMSGQIDLIDKVMGAWGIKTIKMPGYEADDVLATLAA 185 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLPDY 168 +AG++ +V+ D+ QL++ + + + LDAP I +++ V P Q D Sbjct: 186 MGEKAGYEVLLVTGDRDAFQLITDNVFVLYPRKGVSDIPRLDAPAIQEKYFVSPAQYSDL 245 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G S+ +PGV G+GPK+A + + + LEG+ E+LD + K L + + Sbjct: 246 AALVGESADNLPGVPGVGPKTAAKWINLYGGLEGVLEHLDKIGGKVGDSLRENVDAVKRN 305 Query: 229 RDIARLQTDLHIDGNLQQL 247 R + RL TDL + L L Sbjct: 306 RRLNRLHTDLELPVTLDDL 324 >UniRef50_P46835 DNA polymerase I n=51 Tax=Actinobacteridae RepID=DPO1_MYCLE Length = 911 Score = 290 bits (744), Expect = 2e-77, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 123/260 (47%), Gaps = 17/260 (6%) Query: 5 LLIVDALNLIRR-IHAVQG----------SPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L+++D +L R +A+ + V L L+ PTH A FD Sbjct: 18 LMLLDGNSLAFRAFYALPTENFKTRGGLTTNAVYGFTAMLINLLREEAPTHIAAAFDVSR 77 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R + YKA R +P E H ++ + G+ ++ +G EADDL ATLA + Sbjct: 78 KT--FRSECYAGYKANRSSIPAEFHGQIDITKEVLGALGITVFAEAGFEADDLIATLATQ 135 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 G++ +V+ D+ QL+S + + + + +++GV P Q PD Sbjct: 136 AENEGYRVLVVTGDRDALQLVSNDVTVLYPRKGVSELTRFTPEAVIEKYGVTPAQYPDLA 195 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G S +PG+ G+G K+A + +V++ SL+G+ +N+++V K + L TH R Sbjct: 196 ALRGDPSDNLPGIPGVGEKTAAKWIVDYGSLQGLVDNVESVRGKVGEALRTHLASVVRNR 255 Query: 230 DIARLQTDLHIDGNLQQLRL 249 ++ L D+ + LRL Sbjct: 256 ELTELVKDVPLVQTSDTLRL 275 >UniRef50_A7HD60 DNA polymerase I n=2 Tax=Cystobacterineae RepID=A7HD60_ANADF Length = 899 Score = 290 bits (743), Expect = 3e-77, Method: Composition-based stats. Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 24/272 (8%) Query: 1 MAVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L ++D + R + + V L + + PTH V V D Sbjct: 1 MP-TLTLIDGSGFVFRAYHAIPHLSTTRGTPTNAVYGFTTMLLKALREHAPTHVVLVMDA 59 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 +S +R++ P YKA RP P++L + P +R + VP G EADD+ ATLA Sbjct: 60 GRKS--FRNEIDPAYKANRPEAPDDLQVQFPLVREVADALAVPRIEEPGVEADDVIATLA 117 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYF-----QKRWLDAPFIDKEFGVQPQQLP 166 + + G + +V+ DK + QL+ L + D + W ++K+ GV+P Q+ Sbjct: 118 SRAREQGWEVVVVTGDKDFGQLVDERLSLYDPMAEASGRGGWTGPGEVEKKLGVRPDQVI 177 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-------EKWRKKLE 219 +Y + G VPG+ GIG +A L+ F ++E + + + EK ++K+ Sbjct: 178 EYMAILGDKIDNVPGIPGIGEVTAAALVRHFGTVEEMLRRPEEIKAALSRGGEKVKEKIV 237 Query: 220 THKEMAFLCRDIARLQTDLHIDGNLQQLRLVR 251 +E R + L+ DL + Q R Sbjct: 238 ASEERIRKNRQLVSLRRDLVLPFAPGQFERRR 269 >UniRef50_Q252Y8 DNA polymerase I n=14 Tax=Chlamydiaceae RepID=Q252Y8_CHLFF Length = 869 Score = 290 bits (743), Expect = 3e-77, Method: Composition-based stats. Identities = 73/256 (28%), Positives = 128/256 (50%), Gaps = 11/256 (4%) Query: 4 HLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 + I+DA + R + +G+ V ++++LI P H VAVFD N Sbjct: 3 KIFILDASGFVFRAYFALPDMKNSSGKGTQAVFGFIRSINKLIKEFSPNHMVAVFDGPNN 62 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 R + DYK+ R E+L+ ++P ++ G+ G EADD+ A+++ Sbjct: 63 KQS-RREIYADYKSNREKKEEDLYQQIPVVKEYCNLLGLSHLEVEGVEADDVIASVSKLA 121 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR-WLDAPFIDKEFGVQPQQLPDYWGLAG 173 G++ I + DK QL+SP + + + ++ + +D + +GV P ++PDY L G Sbjct: 122 IAEGYEVCICTADKDLLQLVSPNVVVINPWKDQPPIDENGVVNIYGVPPCRIPDYLALVG 181 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR 233 +S +PGV+G GPK A LL ++ S+EGI E+LD + K K++ L +D+A Sbjct: 182 DTSDNIPGVSGCGPKKAAALLQKYHSVEGILEHLDELTGSTHKMFSEQKDILLLSKDLAV 241 Query: 234 LQTDLHIDGNLQQLRL 249 L ++ + ++ L Sbjct: 242 LNNNVPLPTEIKDLEF 257 >UniRef50_P74933 DNA polymerase I n=3 Tax=Bacteria RepID=DPO1_TREPA Length = 997 Score = 289 bits (742), Expect = 4e-77, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 129/259 (49%), Gaps = 16/259 (6%) Query: 2 AVHLLIVDALNLIRR-IHAVQGSP----------CVETCQHALDQLIMHSQPTHAVAVFD 50 L ++DA LI R HA +P V +L L+ H +P + VAVFD Sbjct: 4 KKTLYLLDAYGLIYRSYHAFARAPLINDSGANVSAVYGFFRSLHTLLCHYRPRYFVAVFD 63 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + + +RH + P YKA R EL+ ++P + G+ G EADDL ATL Sbjct: 64 --SLTPTFRHVQYPAYKAKRDKTSAELYAQIPLIEEILCALGITVLRHDGFEADDLIATL 121 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDY-FQKRWL--DAPFIDKEFGVQPQQLPD 167 A +V I+S+DK QL+ T+++ +W DA ++ + + V P QL D Sbjct: 122 AKRVAAEHCHVVIISSDKDVLQLVCDTVQVLRLDIDHKWTCCDAAYVQQRWTVMPTQLLD 181 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 + L G SS VPGV GIGPK+A LL F +L+GIY + ++ E R K+ K+ AF Sbjct: 182 LFSLMGDSSDNVPGVRGIGPKTAAHLLHCFGTLDGIYRHTYSLKEALRTKIVCGKKDAFF 241 Query: 228 CRDIARLQTDLHIDGNLQQ 246 R + L+ D+ +L+ Sbjct: 242 SRSLIELRDDVPCVFSLED 260 >UniRef50_B6YQQ9 DNA polymerase I n=13 Tax=Bacteroidales RepID=B6YQQ9_AZOPC Length = 928 Score = 289 bits (742), Expect = 4e-77, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 124/261 (47%), Gaps = 19/261 (7%) Query: 3 VHLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 + L ++DA LI R + + + + LD ++ PTH FD Sbjct: 1 MKLFLLDAYALIYRAYYSFIKMPLINSKGFNTSAIFGFVNTLDNILRRENPTHIGVAFDP 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RHQ YKA R PE + +P ++ +P SG EADD+ T+A Sbjct: 61 IEPT--FRHQVFKQYKAQREETPETIRLSIPIIKDIVSAYHIPILEVSGYEADDVIGTVA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFG-VQPQQLP 166 K T ++ +++ DK Y QL+ + I ++ L I +++G + P Q+ Sbjct: 119 KK-TSRDYEIFMMTPDKDYGQLVDEHIFIYKPRYRKDGFEILGVKEIKEKYGFISPIQMI 177 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D+ GL G SS +PG GIG +A +L+ F S+E + +N+ + + K+E +KE Sbjct: 178 DFLGLMGDSSDNIPGCPGIGEITAKKLIARFGSIENLLKNVHFLNGILKTKIERNKETIL 237 Query: 227 LCRDIARLQTDLHIDGNLQQL 247 + +A ++TD+ I+ N +L Sbjct: 238 FSKFLATIKTDVPINFNPNEL 258 >UniRef50_C8W7U1 DNA polymerase I n=3 Tax=Coriobacteriaceae RepID=C8W7U1_ATOPD Length = 912 Score = 289 bits (742), Expect = 4e-77, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 17/261 (6%) Query: 4 HLLIVDALNLIRRIH--------AVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + ++D +L+ R A G+P + + +L+ P + FD Sbjct: 29 TIAVIDGNSLMHRAFHAIRQPMAAPDGTPTGALFGFFNMFIKLVESFSPDGVICAFDKGK 88 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 R LP YKA RPPM LH + P ++ + VP G E DD+ TLA + Sbjct: 89 --PQIRIDMLPQYKAQRPPMDPALHAQFPVVKELLKTLDVPVCQLEGWEGDDILGTLARR 146 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEF-GVQPQQLPDY 168 G+Q + + D+ QL + ++I + + + + G+ P+ +PD+ Sbjct: 147 GEAEGYQMLLFTGDRDMYQLSTENVKIVSTRKGVSDVSIMTPETVADLYAGITPELVPDF 206 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 +GL G SS +PGV GIGPK A L+VE+ SL+ + + D V K + L H + A L Sbjct: 207 YGLKGDSSDNIPGVPGIGPKKAAALIVEYGSLDEVIAHADEVKGKVGENLRAHIDDALLS 266 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 R +A ++TD +D NL + Sbjct: 267 RKVATIRTDAPLDINLDDAKF 287 >UniRef50_C0ZE02 Putative 5'-3' exonuclease n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE02_BREBN Length = 292 Score = 289 bits (742), Expect = 5e-77, Method: Composition-based stats. Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 16/259 (6%) Query: 4 HLLIVDALNLIRRIHAVQG-------------SPCVETCQHALDQLIMHSQPTHAVAVFD 50 +L++D ++ + R + V + ++P+H V +D Sbjct: 6 KVLLIDGMSFLFRAFYGSAWGGAYRQTSTGVYTNAVYGFTKMMLDYAELTRPSHLVVGWD 65 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 +R S R Q YK+ R P+EL + ++ + VP G E DD+ TL Sbjct: 66 VASRESLVRSQWYDGYKSNRQAAPDELIPQFDLVKEVTDAFSVPNLGCPGFEGDDVLGTL 125 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRI---RDYFQKRWLDAPFIDKEFGVQPQQLPD 167 + ++++ GH+ I + D QL+S + + ++ + + + G+ P+Q+ D Sbjct: 126 STRLSEEGHEVIIATGDYDSLQLISERVSVKILKNGGKHEHYNPASLLALRGITPEQVVD 185 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 L G +S +PG GIG K+AT+L+ E L+ +Y NL K R KLE +++ +L Sbjct: 186 VKALMGDASDCIPGCPGIGEKTATKLITEHGDLDNLYVNLANCTPKMRSKLEENRDQVYL 245 Query: 228 CRDIARLQTDLHIDGNLQQ 246 R +A + D+ ++ L+ Sbjct: 246 SRKLATIIRDVPVEYALED 264 >UniRef50_C2D755 DNA-directed DNA polymerase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D755_9ACTN Length = 1030 Score = 289 bits (741), Expect = 5e-77, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 17/258 (6%) Query: 2 AVHLLIVDALNLIRR-IHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 + ++D +L+ R HA+ + + + + L +L+ P + FD Sbjct: 67 TKTIAVIDGNSLMHRAFHAIMQPMSAPDGRSTNALLGFFNMLIKLVRSFSPDGIICAFDK 126 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 R LP YKA RPPM LH++ P ++ +P G E DD+ TLA Sbjct: 127 GK--PQVRIDMLPQYKAQRPPMDPSLHEQFPMVKELLRALQIPVVELQGWEGDDILGTLA 184 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEF-GVQPQQLP 166 + G+ + + D+ QL + + + + R + +D + G+ P +P Sbjct: 185 HQGELQGYSMLLFTGDRDIYQLATEHVSVVSTKKGVSDVRIMTPEDVDDLYHGITPNLVP 244 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D++GL G +S +PGV GIGPK A L+VE+ SLEG+ + D V+ K + L H + A Sbjct: 245 DFYGLKGDTSDNIPGVPGIGPKRAAALIVEYGSLEGVIAHADQVSGKMGENLRNHIDDAR 304 Query: 227 LCRDIARLQTDLHIDGNL 244 L + +A ++ D I +L Sbjct: 305 LSKRVATIRRDAPITVDL 322 >UniRef50_Q2GD93 DNA polymerase I n=2 Tax=Neorickettsia RepID=Q2GD93_NEOSM Length = 829 Score = 289 bits (740), Expect = 7e-77, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 12/259 (4%) Query: 1 MAVHLLIVDALNLIRRIHAVQGS--------PCVETCQHALDQLIMHSQPTHAVAVFDDE 52 M+ L+I+DA N + + + V + L + + +P + V D Sbjct: 1 MSETLMIIDAYNFLFSAYFALPNLTHNELPVGAVYGFLNILLKHLRT-KPEYLVVALDHG 59 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 S +R +YKA RPP+P L + LR + + G EADD+ ATL Sbjct: 60 K--STFRETIYNNYKANRPPVPGNLTPQFALLRECVDVLNLNPLEIEGFEADDVIATLVR 117 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 K +++ + I+STDK QL++ + + + + R + + ++FGV P Q+ D+ L Sbjct: 118 KFSKSDLKIKILSTDKDLMQLVNENVHVINPIKNRIIGVNEVKEKFGVFPTQMTDFLSLV 177 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIA 232 G +S +PGV GIG K+A +LL F ++E N + + ++ L H + L + + Sbjct: 178 GDTSDNIPGVPGIGVKTAAKLLNTFGAIENFRLN-EISPARIKESLLRHHDQLTLSKRLV 236 Query: 233 RLQTDLHIDGNLQQLRLVR 251 L D++I +L +R + Sbjct: 237 SLVDDINIQCSLDCIRYQQ 255 >UniRef50_C0QYF7 DNA polymerase I n=3 Tax=Brachyspira RepID=C0QYF7_BRAHW Length = 920 Score = 289 bits (740), Expect = 8e-77, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 17/259 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 M LI+DA ++ R H + Q + LI + Sbjct: 1 MKKTFLIIDAFGILYRYHFIFLKRPLLNSKGQNVSSINGFMRTYFSLINTYPAEYVAIAL 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D ++ +R++ +YK R MP++L ++P L + G+ EADD+ T Sbjct: 61 DSSRKT--FRNEIYKEYKENRESMPDDLRSQIPILYNLIDALGISRIVLDNYEADDIVGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW---LDAPFIDKEFGVQPQQLP 166 +A + + + I S DK QL+ +++ + DA + ++ GV P Q+ Sbjct: 119 IAERNKKENIKTIIYSPDKDILQLVDDDVKVVASNKDNELMEYDAQAVKEKRGVYPNQII 178 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D L G +S +PGV G+G K+A +LL E++SL+GIYEN+D++ K ++KL K+MA+ Sbjct: 179 DLLSLMGDASDNIPGVKGVGEKTALKLLEEYKSLDGIYENIDSIKGKIQEKLLESKDMAY 238 Query: 227 LCRDIARLQTDLHIDGNLQ 245 + +A ++ ++ NL Sbjct: 239 MSYKLATIERNIE-GFNLD 256 >UniRef50_B2GGW1 DNA polymerase I n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GGW1_KOCRD Length = 960 Score = 288 bits (739), Expect = 8e-77, Method: Composition-based stats. Identities = 71/271 (26%), Positives = 123/271 (45%), Gaps = 24/271 (8%) Query: 3 VHLLIVDALNLIRRIHAVQGSPC------------------VETCQHALDQLIMHSQPTH 44 LL++D +L R V + + +L+ +PTH Sbjct: 41 KRLLLIDGHSLAFRAFFALSRAAEYGNGPGFVTSEGVHTEGVYGFVNTMVKLVREEKPTH 100 Query: 45 AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEAD 104 V FD E + R Q +YK GR PEE H ++P ++ E GVP + G+EAD Sbjct: 101 LVVSFDLEGPTL--RSQEYGEYKGGRDETPEEFHGQVPNIQRVLEALGVPIVTMEGHEAD 158 Query: 105 DLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGV 160 D+ ATLA + + + S D+ Q+++ + + R R +DA + +++ V Sbjct: 159 DVLATLASRAAAEDFEVLVFSGDRDAFQMITDHVTVVYPGRTPSDLRRMDAAAVYEKYKV 218 Query: 161 QPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLET 220 PQ PD L G ++ +PGV G+GP A + + + ++ + E+ + K + L Sbjct: 219 APQNYPDLAALTGETADNLPGVPGVGPGFAAKWITAYGPVDSLLEHAGQITGKKGEALRE 278 Query: 221 HKEMAFLCRDIARLQTDLHIDGNLQQLRLVR 251 ++E+ R + RL TDL ++ +L L + Sbjct: 279 NEELVRRNRKLNRLVTDLPLEIDLSATALPK 309 >UniRef50_C7GZ50 DNA polymerase I n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ50_9FIRM Length = 918 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 15/262 (5%) Query: 2 AVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 + +I+D +L R + + + L + I P + FD Sbjct: 3 SKRAIIIDGNSLFFRAYYAIKANMSADGMATNAIYGFLSMLYKSINDFSPDYIAVAFDLG 62 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +RH++ DYKA R +EL ++P ++ + E DD+ + A Sbjct: 63 GKT--FRHEKFDDYKANRRKTDDELLMQIPVIKEILAAMNIKILQKKAFEGDDIIGSFAR 120 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 V + I+S DK QL+S +I R D + E+ P+ DY Sbjct: 121 FVESDDVEVIIISGDKDMFQLISDNTKIAYTKRGISNIDIYDIQKFEDEYNFAPKHFIDY 180 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 + G SS GV GIG K A L+ ++Q++E IY+N+D ++ K + LE K AF+ Sbjct: 181 KAIMGDSSDNYKGVKGIGDKGARNLVTKYQTIENIYQNIDEISGKTKLALENSKMQAFMG 240 Query: 229 RDIARLQTDLHIDGNLQQLRLV 250 +++A + +L + L ++LV Sbjct: 241 KELATIIVNLDLGLTLDDVKLV 262 >UniRef50_B9Y7P1 DNA polymerase I n=2 Tax=Erysipelotrichaceae RepID=B9Y7P1_9FIRM Length = 900 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 118/260 (45%), Gaps = 19/260 (7%) Query: 3 VHLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 +L+VD +++ R + + +++ + QP + FD Sbjct: 32 KKMLLVDGNSMLFRAFYATFMRPMSTSTGIPTNAIYGFAMMINKAVQIIQPDAMLVAFDK 91 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH+ +YK GR P+ L ++ P +R E G+ + + EADD+ ++ Sbjct: 92 GKHT--FRHELFAEYKGGRKETPDALVEQFPIVREYLEAAGIKQFEMTDIEADDIIGSMI 149 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 K ++S+D+ QL+ T + + + + ++ G+ P Q+ D Sbjct: 150 KKYPD--WDINVLSSDRDMLQLIDETTSVWLMKKGISDIEEMTVESLKEKMGITPDQIRD 207 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 GL G +S +PG+ +G K+A +LL +F ++E + N D + K + +E K+ A L Sbjct: 208 LKGLMGDASDNIPGIPKVGEKTALKLLEQFGTVENLIANTDQLKGKLKDNVEAFKDQALL 267 Query: 228 CRDIARLQTDLHIDGNLQQL 247 + +A ++TD+ I ++ Sbjct: 268 SKRLATIKTDVEIPFETEEF 287 >UniRef50_D0RQG2 DNA polymerase I n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQG2_9RICK Length = 925 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 123/266 (46%), Gaps = 20/266 (7%) Query: 3 VHLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMHSQ-------PTHA 45 HL ++D I R + G P V + L + ++ PTH Sbjct: 5 KHLFLIDGSGYIFRAYYALPPLTRKSDGLPVGAVSGFCNMLYSFLEKAKAGNTMDTPTHL 64 Query: 46 VAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADD 105 +FD + +R+ DYK R PE+L + +R A + +P EADD Sbjct: 65 AVIFDSARK--NFRNDIYKDYKGNRSDAPEDLIPQFDYIRKAVKAFNLPSIEMLNYEADD 122 Query: 106 LAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQL 165 L AT K + + TIVS+DK QL+ + D + R + + ++FGV P+++ Sbjct: 123 LIATYKEKAKKKKIKITIVSSDKDLMQLVDKETFMLDTMKDRHIGIEEVKEKFGVPPEKV 182 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEM 224 D LAG S +PGV GIG K+A +L+ +F SL+ + + D + K R+ L +K+ Sbjct: 183 IDVQSLAGDSVDNIPGVPGIGVKTAAELINQFGSLDELLKKADTIKQPKRRQTLLDNKKN 242 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRLV 250 A + R++ L+ D+ I ++ L Sbjct: 243 ALISRELVTLKCDVPIKEEIEDFILK 268 >UniRef50_C1ZLA6 DNA polymerase I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZLA6_PLALI Length = 1031 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 80/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%) Query: 7 IVDALNLIRR-IHAV--------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSG 57 ++D ++ + HA+ Q + V L LI +PT + D Sbjct: 98 LIDVFGVMFQVFHAIPPMTSPAGQPTNAVFGFCRDLLWLIEKQKPTWLICAMDSPGPGI- 156 Query: 58 WRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQA 117 R P+YKA R MPE+L ++P L+ FE G+P G EADD+ A+LA + + Sbjct: 157 -RESWYPEYKANRTEMPEDLRPQIPLLKEVFEAFGLPIIQQDGWEADDVLASLAAQFARH 215 Query: 118 GHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSS 177 G IV+ DK QLL+P ++I + + W + + +E+G++P Q+ D+ GL G + Sbjct: 216 GTDVAIVTNDKDARQLLTPQIQIYNLRKMTWFNEASLLEEWGIRPDQVVDFQGLVGDAVD 275 Query: 178 KVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIARLQT 236 VPGV +GPK A LL +F++LEG+ + D K ++ L+ E A L + + RL T Sbjct: 276 NVPGVPLVGPKKAAALLQQFETLEGVLAHADQAPGAKLKENLKNFAEQARLSQKLVRLNT 335 Query: 237 DLHIDGNLQQLR 248 +L +D + + R Sbjct: 336 ELQLDFDPEAGR 347 >UniRef50_C7H3Z2 DNA polymerase I n=2 Tax=Ruminococcaceae RepID=C7H3Z2_9FIRM Length = 859 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 19/267 (7%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 + + LL++D ++ R + + + ++ L+ +P FD Sbjct: 6 LTMRLLVIDGNSIANRAFYGIKLLTTKDGRYTNAIFGFLNIMNSLLRECEPDEVAVAFDL 65 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ + +RH+ YK R MP+EL +MP L+ G S G EADD+ TLA Sbjct: 66 KHPT--FRHEMYDGYKGTRHAMPDELAQQMPILKELLTDLGYRQVSAKGWEADDILGTLA 123 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIR------DYFQKRWLDAPFIDKEFGVQPQQL 165 + + D+ QL+S T + + +D I +++G++P+QL Sbjct: 124 AACEARRDDCFLATGDRDSLQLVSETTTVLLATSAMGRSKTETMDLDAIHEKYGIEPKQL 183 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDA--VAEKWRKKLETHKE 223 + L G +S +PGV GIG K+A L+ F +L+ +Y++LD+ + + R+ L +E Sbjct: 184 IEVKSLMGDTSDNIPGVKGIGEKTAMTLVKNFGTLDSVYDHLDSPIIKPRQRENLLACRE 243 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRLV 250 A+L + ++TD ID ++ Sbjct: 244 DAYLSHTLGTIRTDAPIDTAEGAYKVT 270 >UniRef50_B9L837 DNA polymerase I n=2 Tax=Nautiliaceae RepID=B9L837_NAUPA Length = 872 Score = 287 bits (735), Expect = 2e-76, Method: Composition-based stats. Identities = 75/257 (29%), Positives = 130/257 (50%), Gaps = 11/257 (4%) Query: 3 VHLLIVDALNLIRR-IHAV------QGSPC--VETCQHALDQLIMHSQPTHAVAVFDDEN 53 + L I+D + R +A+ +G P + + + L + + V D + Sbjct: 1 MTLTIIDTFGFLFRNFYALPPLKSKKGFPTGMITGFLNFVASLGRDFETDYIVFTLDSKE 60 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +R + DYKA RP PE+L ++P + G G E+DD+ A+LA Sbjct: 61 K-DTFRKEIFKDYKANRPEAPEDLKTQLPVAIELINEMGFKMLEIPGYESDDIIASLAKL 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSP-TLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 G + IVS DK QL+ + I D +K ++ ++FGV P+ ++ L Sbjct: 120 AASQGIKVKIVSHDKDMYQLIDDDKIVIFDPIKKVEINEAKCIEKFGVHPKDFINFQALV 179 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIA 232 G SS +PGV G+G K+A +L+ ++++LE +Y+++D + +KKL KE AFL R++ Sbjct: 180 GDSSDNIPGVKGVGVKTAAKLINQYKTLENLYDHIDEIKGALQKKLLADKENAFLSRELV 239 Query: 233 RLQTDLHIDGNLQQLRL 249 L+TDL + NL++ + Sbjct: 240 TLKTDLFDNINLEEFKY 256 >UniRef50_D0LQ66 DNA polymerase I n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQ66_HALO1 Length = 930 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 114/261 (43%), Gaps = 18/261 (6%) Query: 3 VHLLIVDALNLIRRIHAVQGSP--------------CVETCQHALDQLIMHSQPTHAVAV 48 L I+D I R + P + L +L + +P V Sbjct: 2 ERLHILDGHGYIYRAYFALAGPGSQRLSTKGGMPTAALFVYAQMLIRLFIDERPERIAVV 61 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD R+ +R++ YKA R PE+L ++P E G P G EADD+ A Sbjct: 62 FDPPGRT--FRNELDDAYKATRRETPEDLKPQLPYFSKLTEALGWPVICEQGVEADDVIA 119 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 TL + G + S DK QL+ + + D + DA ++K+FGV P +L DY Sbjct: 120 TLVGRARAQGWDVVVYSGDKDLMQLVDEGVTVIDSLRSIVYDAARVEKKFGVPPAKLRDY 179 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLE--THKEMAF 226 L G S VPG+ G+G K+A +LL + S++GI + + + K ++ E Sbjct: 180 LALVGDVSDNVPGMPGVGAKTAAKLLGSYDSIDGILAHNEELKGKMGERFRDPEALERLA 239 Query: 227 LCRDIARLQTDLHIDGNLQQL 247 R++ L++D+ D L L Sbjct: 240 RSRELVTLRSDVATDAELDAL 260 >UniRef50_Q55971 DNA polymerase I n=13 Tax=Cyanobacteria RepID=DPO1_SYNY3 Length = 986 Score = 286 bits (733), Expect = 5e-76, Method: Composition-based stats. Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 29/277 (10%) Query: 1 MAVH---LLIVDALNLIRRIHAVQG--------------SPCVETCQHALDQLIMHSQPT 43 M+ LL+VD +L R + G + ++L Q++ +P Sbjct: 3 MSAKSPLLLLVDGHSLAFRAYYAFGLSKKGPLRTTAGIPTSVCFGFLNSLMQVMESQKPA 62 Query: 44 HAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEA 103 FD R +RH+ YK+ R PE+ +++ L+ E + + +G EA Sbjct: 63 AIAIAFD--RREPTFRHEADGAYKSNRQETPEDFAEDLSYLQQLLEALNLQTITYAGYEA 120 Query: 104 DDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----------WLDAPF 153 DD+ TLA + + AG+Q I+S D+ QL+SP I + R LD Sbjct: 121 DDILGTLACQGSDAGYQVKILSGDRDLFQLVSPEKNISVLYLTRNPFSSNTGYDELDWQG 180 Query: 154 IDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK 213 + + GV P Q+ D+ L G S +PG+ GIG K+A +LL E+++LE +YENL + Sbjct: 181 VVDKMGVTPAQIVDFKALCGDKSDCIPGINGIGEKTAIKLLAEYETLEKVYENLAQIKGA 240 Query: 214 WRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 + +L+ K+ A + +AR+ D+ + + L+L Sbjct: 241 LKTRLDNGKDDAMHSQMLARIVVDVPLPVTWEDLQLT 277 >UniRef50_Q73M72 DNA polymerase I n=1 Tax=Treponema denticola RepID=Q73M72_TREDE Length = 936 Score = 286 bits (732), Expect = 7e-76, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 16/258 (6%) Query: 1 MAVHLLIVDALNLIRRIH---------AVQGSP--CVETCQHALDQLIMHSQPTHAVAVF 49 M + ++DA LI R + +G + +L + P V Sbjct: 1 MKDTIYVLDAYGLIYRSYFAFISRPLTNSKGENVSAIFGFFKSLHSIFTEYNPKLFVTAL 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + + +RH+ +YKA R P++LH ++ + + +P +G EADD+ A+ Sbjct: 61 D--SLTPTFRHEMYKEYKATRDKTPDDLHAQIDKIEEILKTFKLPTVRCNGFEADDVIAS 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQ---KRWLDAPFIDKEFGVQPQQLP 166 +A + G + ++S DK QL+S T + + DA + +E+GV P + Sbjct: 119 IAALAEKEGRECVVISGDKDLMQLVSKTTTMLKPGKIKAWEGFDAENVKEEWGVYPDGML 178 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D L G S+ VPG+ G+GPK+A +LL E++SL+GIY N + + K+E KE A+ Sbjct: 179 DLLSLIGDSADNVPGIKGVGPKTAVKLLEEYKSLDGIYANTGNLKGALKTKIEEGKESAY 238 Query: 227 LCRDIARLQTDLHIDGNL 244 +++ RL+ D+ ++ +L Sbjct: 239 FSKELIRLRFDVPVEKDL 256 >UniRef50_Q2JPZ4 DNA polymerase I n=3 Tax=Cyanobacteria RepID=Q2JPZ4_SYNJB Length = 931 Score = 285 bits (731), Expect = 8e-76, Method: Composition-based stats. Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 22/268 (8%) Query: 2 AVHLLIVDALNLIRR-IHAV-------------QGSPCVETCQHALDQLIMHSQPTHAVA 47 LL+VD +L R +A + +L +++ PTH Sbjct: 5 TPTLLLVDGHSLAYRSFYAFAYSREGGLRTSTGIPTSVSFGFLKSLLEVLDKYTPTHVAV 64 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 FD R +RH+ YK+GRP P E +++ L+ +P G EADD+ Sbjct: 65 AFD--TRQPTFRHEADETYKSGRPETPPEFIEDVENLKQVLTALRIPILVVPGFEADDIL 122 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSP--TLRIRDYFQKRWL---DAPFIDKEFGVQP 162 TL+ Q ++ I+S D+ QL+ +R+ K + + ++ G+ P Sbjct: 123 GTLSRLAPQ-DYRVQILSGDQDLFQLIDTDGRVRVLHLNSKDRISEFGPEQVKEKLGIWP 181 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHK 222 Q+ DY L G S +PGV GIGPK A +LL + SL+ I+++LD + K ++ L+ Sbjct: 182 WQVVDYKALCGDPSDNIPGVKGIGPKRAVELLERYGSLDEIFDHLDEIQGKVQQYLKEGI 241 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQLRLV 250 A + +AR++ D+ + + + ++L Sbjct: 242 PAAHHSQFMARIKCDVPLSPDWESMKLT 269 >UniRef50_Q04G12 DNA polymerase I n=28 Tax=Lactobacillales RepID=Q04G12_OENOB Length = 903 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 19/266 (7%) Query: 1 MAVHLLIVDALNLIRRI-------------HAVQGSPCVETCQHALDQLIMHSQPTHAVA 47 M LL++D +L R H + + + DQ++ P +A+ Sbjct: 12 MTKTLLLIDGNSLAFRAFYAMYNQLDRMVAHTGLHTNALVAFNNFFDQVVEKMNPDYALV 71 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 +D ++ +R + DYK R P EL ++ P LR + G+ + G EADD+ Sbjct: 72 AWDAGKGATTFRAKIFDDYKGDRQTTPPELSEQFPYLRKMVDLHGIHSYELPGFEADDII 131 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEF-GVQP 162 T + +AG + TI++ D+ QL++ + + + F+ +++ G+ P Sbjct: 132 GTYSKLAEKAGLKTTIITGDRDLTQLVTDNVSVNVTKKGVTELDRYTPKFLAEKWGGITP 191 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETH 221 Q+ + L G +S PGV +G K+A +LL EF SL+GIY+++D++ K ++ L Sbjct: 192 SQVIEMKSLTGDTSDHYPGVTKVGLKTAIKLLNEFGSLDGIYQHIDSMKTSKLKENLLND 251 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQL 247 KE A+ ++A ++TD ++ +++L Sbjct: 252 KESAYRAHELATIRTDAPVELEMKEL 277 >UniRef50_A9G0B1 DNA polymerase I n=3 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G0B1_SORC5 Length = 900 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 13/256 (5%) Query: 5 LLIVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 L +VD + R + G P L +L+ +P + D ++ Sbjct: 17 LYLVDLSGYVFRAYHAISPLSSPSGEPTHATYGTVAMLTKLVDERKPAYLGVAMDSPGKT 76 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +R + P YKA RPP P +L +M R E +P + G EADDL A + Sbjct: 77 --FRDELDPRYKAHRPPPPPDLGVQMSRCREIVEAYRIPIFIQEGLEADDLVAVAVARAK 134 Query: 116 QAGHQATIVSTDKGYCQLLS-PTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 + G + I S+DK QL+ + + D + + P + +FGV P+Q+ D L G Sbjct: 135 ERGLRVVIASSDKDLMQLVDGEQVMLWDAMRDKVYGHPEVVAKFGVPPEQVRDLLALVGD 194 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDIAR 233 +S VPGV G+G K+A +LL +F SL IYE + V + R+ L+ ++ A L + + Sbjct: 195 TSDNVPGVPGVGLKTAAELLAQFGSLSAIYERIGEVKKPRIRESLQQNEADARLSQKLVT 254 Query: 234 LQTDLHIDGNLQQLRL 249 L + +L+ LR Sbjct: 255 LDGGAPVSLDLETLRY 270 >UniRef50_A6DML3 DNA-directed DNA polymerase, DNA polimerase I protein n=3 Tax=Bacteria RepID=A6DML3_9BACT Length = 1036 Score = 284 bits (729), Expect = 1e-75, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 130/255 (50%), Gaps = 14/255 (5%) Query: 5 LLIVDALNLIRRI--------HAVQG--SPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 + ++D++ I R H+ G + + ++ + +I P+H VAVFD Sbjct: 7 IFVIDSMAYIFRAFYGIRANMHSKDGLPTNALFGFINSFENIIRDFNPSHVVAVFDAG-- 64 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 S +R++ +YKA R PEEL + ++ RG+P G EADD+ AT+A + Sbjct: 65 SETFRNEMYSEYKANRKECPEELKPQFDLVKEYIALRGIPLLIQKGFEADDIIATVAKQA 124 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRI-RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 T + + I S DK QL++ I + +DA + + GV+P Q+ DY + G Sbjct: 125 TGSHIKTVICSGDKDLMQLVNDDTLICHTHKNNLMIDAEKVVEIMGVRPDQIVDYLSICG 184 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR-KKLETHKEMAFLCRDIA 232 S+ +PG+ GIGPK A +LL EF +LE I + D + K + + + ++A L + + Sbjct: 185 DSADNIPGLPGIGPKGAAKLLAEFDNLETILASHDKIKGKKQSETIREKADLATLSKSLV 244 Query: 233 RLQTDLHIDGNLQQL 247 LQ ++ +D + ++L Sbjct: 245 ILQDEMTLDKSYEEL 259 >UniRef50_Q14QK7 DNA polymerase I n=1 Tax=Spiroplasma citri RepID=Q14QK7_SPICI Length = 869 Score = 284 bits (729), Expect = 1e-75, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 18/255 (7%) Query: 3 VHLLIVDALNLIRRIHAV-----------QGSP--CVETCQHALDQLIMHSQPTHAVAVF 49 +L++D +L+ R G+P V + L++++ + V F Sbjct: 2 KKVLLIDGNSLLFRAFYATAYNGEMLKSLDGTPTNAVYAFTNMLNKILKANNYYSVVVAF 61 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH L DYK GR P EL + P ++ + +P G EADDL Sbjct: 62 DKGKK--NFRHDLLVDYKDGRSKTPNELIVQFPIVKEFLDSYQIPYLEQEGYEADDLLGC 119 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR---WLDAPFIDKEFGVQPQQLP 166 LA+ + I S+DK QL++ I Q +D + ++G++P Q+P Sbjct: 120 LAMLAEKEDFYVDIFSSDKDLYQLITNKTNILVPRQGDSADVIDEAALIAKWGIKPLQVP 179 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D GL G S + GV +G K+A +L+ E+ S+E +Y+N++ + ++ L HKE A Sbjct: 180 DLKGLMGDPSDNLKGVPKVGEKTAIKLIKEYHSIENLYDNIEHIKGALQQNLLNHKESAL 239 Query: 227 LCRDIARLQTDLHID 241 LC+ IA + D++++ Sbjct: 240 LCKKIATIFCDINLE 254 >UniRef50_Q7UI29 DNA polymerase I n=1 Tax=Rhodopirellula baltica RepID=Q7UI29_RHOBA Length = 1027 Score = 284 bits (729), Expect = 1e-75, Method: Composition-based stats. Identities = 81/253 (32%), Positives = 134/253 (52%), Gaps = 12/253 (4%) Query: 5 LLIVDALNLIRR-IHAVQGS--------PCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 +++VDA +LI + HA+ V + +L+ P + +A FD + Sbjct: 130 VVVVDAHSLIYQVFHALPPMTSTGGLPVSAVYGFVGDMLELLSRKNPDYLIAAFDKSEVT 189 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +R++ P+YKA R MP+EL ++P +R A + G+ SG EADDL AT+A KV Sbjct: 190 --FRNELYPEYKANRDSMPDELRQQIPLIRQAIDAMGIGIIEQSGFEADDLLATVAAKVE 247 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 +AG + +V++DK QL+S +I + + + +DA + +G++P Q+ DY L G Sbjct: 248 EAGGRCLVVTSDKDCRQLISDQTKIYNIRKDQEIDAAELFGLWGIRPDQVVDYQALVGDP 307 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRK-KLETHKEMAFLCRDIARL 234 VPG++ IGPK A QLL +LE I N ++++ K RK L +E A + R++ L Sbjct: 308 VDNVPGISLIGPKIAQQLLETHDTLEEILNNAESISGKKRKENLMNGREAAMMSRELVEL 367 Query: 235 QTDLHIDGNLQQL 247 + D+ + Sbjct: 368 KRDVESPIPWNRC 380 >UniRef50_D1AJI6 DNA polymerase I n=2 Tax=Fusobacteriaceae RepID=D1AJI6_SEBTE Length = 885 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 135/262 (51%), Gaps = 17/262 (6%) Query: 4 HLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 +I+D ++ R H + + + L+ +I P + VA D + R Sbjct: 3 KAVILDTSAIMYRTHFALMGMRNSKGKATGATYGFINTLNLIIKEFSPDYLVACLDVK-R 61 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 S R L +YKA R MPEEL ++P + + +P + G EADD+ ATLA K Sbjct: 62 SELKRTSELTEYKAHREDMPEELVYQIPKIMEVLDAYNIPKYKVDGYEADDVIATLAKKF 121 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------RWL-DAPFIDKEFGVQPQQLPD 167 + ++ IV+ DK QL+ + I + +++ + + GV+P Q+ D Sbjct: 122 SDDNNEVFIVTGDKDLMQLIKDNINIALLGKGDGKSQFKYIQTEQDVVEYLGVRPDQVID 181 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 +GL G S +PG+ GIGPK+ +L+ ++ +LE +YEN++ + K ++KLE KE AFL Sbjct: 182 LFGLMGDKSDGIPGIQGIGPKTGVELISKYGNLETLYENIEEIKGKRKEKLENEKENAFL 241 Query: 228 CRDIARLQTDLHIDGNLQQLRL 249 R++A + DL ++ N ++L+ Sbjct: 242 SRELATVHMDLDVEYNKEKLKY 263 >UniRef50_UPI00016BFC66 DNA polymerase I n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFC66 Length = 865 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 22/266 (8%) Query: 3 VHLLIVDALNLIRRIHAVQGSP-----------CVETCQHALDQLIMHSQPTHAVAVFDD 51 + +++VD ++ R A G P + L L+ QP FD Sbjct: 1 MKIMLVDGFSIAYR--AFYGMPLLSTKEGIFTNAIYGFLKILFNLLDTHQPDALAVAFDF 58 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RHQ YKA R PMP EL ++P L+ G+ S G EADD+ TLA Sbjct: 59 AAPT--FRHQYALTYKATRKPMPSELQPQIPLLQDLLSAMGISHISAPGFEADDILGTLA 116 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------RWLDAPFIDKEFGVQPQQL 165 A H IVS D+ Q+ + +++I K A + ++GV P +L Sbjct: 117 TAAAAAKHDVLIVSGDRDLLQIATDSIQIXIPKTKQTGTEIESYYAADVVAKYGVIPTEL 176 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEM 224 D L G +S +PGV G+G K+A +L+ E+++++ +Y NL+ + K ++ L T+K+ Sbjct: 177 IDVKALMGDASDNIPGVKGVGEKTALKLIAEYKNIDTLYANLENIKGAKLKENLATYKDS 236 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRLV 250 A+ + +A ++ D+ I+ LQ Sbjct: 237 AYDSKFLATIKIDIPINFTLQDFSFK 262 >UniRef50_B5FAT7 Uncharacterized exonuclease xni n=138 Tax=Gammaproteobacteria RepID=XNI_VIBFM Length = 262 Score = 284 bits (727), Expect = 2e-75, Method: Composition-based stats. Identities = 130/256 (50%), Positives = 180/256 (70%), Gaps = 6/256 (2%) Query: 1 MAVHLLIVDALNLIRRIHAVQGS-----PCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 MA+HL+I+DALNLIRR+H+ Q + + T +++++ ++PTH +AVFD + Sbjct: 1 MAIHLVIIDALNLIRRVHSAQPNQDDIQAVITTTTRTINKILKETEPTHIIAVFDHHLQD 60 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 GWR + LP YK R PMPE L M ++ A+ + G+ + G+EADDL ATLA KV Sbjct: 61 RGWRAEILPQYKEDRKPMPEALQKGMDDIQEAWWKLGIDSLLSDGDEADDLVATLANKVA 120 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 Q TI+STDKGYCQLLSPTLRIRDYFQ RWLDAPF++KEFG++P+QL DYWGLAGIS Sbjct: 121 VHNEQVTIISTDKGYCQLLSPTLRIRDYFQHRWLDAPFVEKEFGLKPEQLADYWGLAGIS 180 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQ 235 SSK+ G+ G+GPK+A ++L +F ++E E+ D + +K+RKK + H E A LCR +A L+ Sbjct: 181 SSKITGIPGVGPKAALEILTQFPTIEAANESED-LPKKYRKKFDEHYETAILCRQVAGLR 239 Query: 236 TDLHIDGNLQQLRLVR 251 TD+ + NLQ +R + Sbjct: 240 TDIELGFNLQDIRYEK 255 >UniRef50_D2R075 DNA polymerase I n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R075_9PLAN Length = 966 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 80/258 (31%), Positives = 138/258 (53%), Gaps = 12/258 (4%) Query: 4 HLLIVDALNLIRR-IHA------VQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENR 54 + ++DA +LI + HA G P V+ + LI + + VA FD + Sbjct: 18 TVYVIDAHSLIYQVFHAMPEMTSPSGQPVGAVQGFVRDMLDLIENRSAEYIVAAFDHPSP 77 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + +RH +YK R MP +L ++P ++ + G+ S G EADD+ ATLA +V Sbjct: 78 T--FRHTMYENYKVHRDEMPGDLQSQIPIIQQFLDALGITQLSIPGFEADDILATLAKRV 135 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 G + +V++DK QL++ +++ + + D + +G++P Q+ D+ L G Sbjct: 136 ASDGGRCLVVTSDKDCRQLINDRVQMLNLRKNEIFDDVALMATWGIRPDQVVDFQSLVGD 195 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIAR 233 S VPGV IGPK A +LL ++++LEG+ +N D V+ K ++ L+ ++ AFL RD+ R Sbjct: 196 SVDNVPGVPLIGPKIAQELLAKYETLEGVLDNADQVSGAKRKENLKNFRDQAFLSRDLVR 255 Query: 234 LQTDLHIDGNLQQLRLVR 251 L+ D+ D + +R+ R Sbjct: 256 LKNDMEFDLDWSSVRVGR 273 >UniRef50_Q7WZP8 DNA polymerase type I n=2 Tax=unclassified Bacteroidetes RepID=Q7WZP8_9BACT Length = 939 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 129/265 (48%), Gaps = 18/265 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQG-----------SPCVETCQHALDQLIMHSQPTHAVAVF 49 + L ++D ++LI R H G + + + L L+ +PTH + F Sbjct: 4 LTPKLFLLDGMSLIYRAHFALGKAATTTAQGLKTGAILGFVNTLVALLEKEKPTHLIVAF 63 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + ++ +RH P YK+ RP PEE+ +P +++ E G+ + SG EADDL T Sbjct: 64 DGKEKT--FRHALFPAYKSHRPVQPEEISIAIPYIKSILEGFGILAITYSGYEADDLLGT 121 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYF----QKRWLDAPFIDKEFGV-QPQQ 164 LA K G + I+STDK Q++ + + + L I ++ + +P+Q Sbjct: 122 LAKKAAVMGCRTYIMSTDKDLAQIVGDNIYLYKPSSYGEKSTILGEKEILAQWEIARPEQ 181 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + D L G S +PG+ IG K+A +L+ EF +LE I + + K + L + + Sbjct: 182 VRDILALEGDPSDFIPGIPSIGKKTARKLIKEFDNLENILAHSHMLTGKLKANLIQYADQ 241 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 L +++A ++T++ I +L++ Sbjct: 242 GILSKELATIRTNVPITLDLEKCHY 266 >UniRef50_C5CIW2 DNA polymerase I n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIW2_KOSOT Length = 896 Score = 283 bits (725), Expect = 4e-75, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHS--QPTHAVAV 48 MA L + D ++ R + + + V L + I + + +A+ Sbjct: 1 MANRLFLFDGTAIVYRAYFAIDVSLTNSKGEPTNAVYGTARMLSRFIKNYIAEGDYALFA 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + + RH YKA R MP+ L ++ + E G+ S + EADD+ A Sbjct: 61 FD--RKEATHRHDLFEGYKATRAEMPDALVAQLKYIPDLVEGFGIKFHSVATLEADDIIA 118 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQ 164 T K + IVS DK QL+ +++ + D ++++FG+ P++ Sbjct: 119 TAVTKYRDKFDEIVIVSGDKDILQLVDEKVKVLRFVSGLTDLEEYDRRKVEEKFGLPPEK 178 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + + L G +S +PGV GIG K+A +LL E+ S++ IY+N+ ++ RKKL K+ Sbjct: 179 IYELLSLCGDTSDNIPGVPGIGIKTALKLLKEYGSIDEIYKNIRKLSPGLRKKLMDGKKA 238 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 + + + RL TD + L++LR Sbjct: 239 LEMSKKLVRLVTDADLHIELEELRY 263 >UniRef50_A5EWG4 DNA polymerase I n=10 Tax=Gammaproteobacteria RepID=A5EWG4_DICNV Length = 901 Score = 282 bits (723), Expect = 8e-75, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 114/256 (44%), Gaps = 15/256 (5%) Query: 5 LLIVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 +++VD + + R +G P + L +L QP + VFD ++ Sbjct: 8 VVLVDGSSYLFRAFYALPPLTTQKGHPTGAMHGVIKMLMRLYDDYQPNYFAVVFDAAGKT 67 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +RHQ PDYKA RPPMPE+L ++ L G P SG EADD+ TLA + Sbjct: 68 --FRHQIYPDYKANRPPMPEDLAVQIQPLHQLITALGFPLIMESGVEADDVIGTLARQAL 125 Query: 116 QAGHQATIVSTDKGYCQLLSP-TLRIRDYFQKRWLDAPFIDKEFGVQP---QQLPDYWGL 171 +Q I S DK QLL+ + + D + + A + K F ++ Q+ D+ L Sbjct: 126 AEDYQVIISSGDKDMTQLLTHADITLLDTMKNETITASDVAKRFKIEQLTAAQVIDFLAL 185 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G S +PGV +G K+A + L + SL+ I EN D + K L + + Sbjct: 186 VGDKSDNIPGVEKVGAKTAEKWLATYGSLDAIIENADKIRGKVGDNLRAGLAQLKCSQQL 245 Query: 232 ARLQTDLHIDGNLQQL 247 A + L + + L Sbjct: 246 ATINQTLDLPYRIADL 261 >UniRef50_Q4L6E6 Similar to 5&apos n=2 Tax=Staphylococcus RepID=Q4L6E6_STAHJ Length = 292 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 20/258 (7%) Query: 1 MAVHLLIVDALNLIRR-IHAVQ------------GSPCVETCQHALDQLIMHSQPTHAVA 47 M +L+VD + L+ R +A + ++ + I P+H Sbjct: 1 MENRVLLVDGMALLFRHFYATSLHNQFMYNSKDIPTNGIQGFVRHIFTAINEINPSHVAV 60 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 +D S +R+ DYK RP PEEL + ++ +Q G + EADD+ Sbjct: 61 CWDMGQ--STFRNDMYTDYKQNRPAPPEELIPQFDYVKEISDQFGFINVGMTNYEADDVI 118 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQ 163 TLA + + I++ DK Q ++ + + + ++E+ + PQ Sbjct: 119 GTLAKTFSDNN-EVHIITGDKDLLQCINNNVEVWLIKKGFNIYNRYTLARFNEEYQLNPQ 177 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 QL D G S+ PGV GIG K+A +L+ + S+E + N+D + RKK+E K+ Sbjct: 178 QLIDIKAFMGDSADGYPGVKGIGEKTALKLIQTYGSVENVLSNIDQLTPAQRKKIEADKD 237 Query: 224 MAFLCRDIARLQTDLHID 241 L + +A + T++ ++ Sbjct: 238 NLTLSKRLAEIYTEVPLN 255 >UniRef50_B4S5F3 DNA polymerase I n=12 Tax=Chlorobiaceae RepID=B4S5F3_PROA2 Length = 950 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 18/262 (6%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSP--CVETCQHALDQLIMHSQPTHAVAVFD 50 L ++D + L+ R G P L ++ P + FD Sbjct: 34 KPELFLLDGMALVYRAFFALQRADMKTRDGVPTGAAFGFLTTLLKIYETYAPDYLAVAFD 93 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 +R +RH+R YKA RP PE+L ++ + E +P G EADDL T Sbjct: 94 --SREKTFRHERYDAYKANRPQPPEDLITQLDFIFRLIEAFNIPILKQPGYEADDLIGTA 151 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLP 166 A + + IVS DK QL+ + + +++ A + +E G+ P Q Sbjct: 152 AREFEPE-CRINIVSPDKDMTQLIHDGVTLLKPGKRQNELLRFGAAELKEELGIAPDQFI 210 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D L G SS +PG GIGPK+A++LL+ + SL+ I +NL+ + + RK LE Sbjct: 211 DLLTLTGDSSDNIPGAKGIGPKTASKLLLSYGSLDEISKNLEKLPPRTRKSLEEFLPERE 270 Query: 227 LCRDIARLQTDLHIDGNLQQLR 248 L RD+ ++TD+ + L L+ Sbjct: 271 LIRDLVTIKTDIDLQTPLASLQ 292 >UniRef50_C4GAN0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GAN0_9FIRM Length = 910 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 20/267 (7%) Query: 1 MAV--HLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 MA LL++D +++ R Q + V + L + + +P H F Sbjct: 1 MAEQSKLLLIDGHSILNRAFYGLPDLTNSKGQHTNAVYGFLNILFKTMEEEKPDHLTVAF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH+ DYK R PM EL +++P ++ G+ + G EADDL T Sbjct: 61 DLSAPT--FRHRMFADYKGTRKPMAAELREQVPMIKEMLAAMGICLVTKEGLEADDLLGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDA------PFIDKEFGVQPQ 163 ++ AG TI+S D+ QL + ++I K+ + + + V P Sbjct: 119 MSKIGEAAGMDVTILSGDRDLLQLATDKVKIMIPKTKKGGTETESYYAKDVRETYQVSPT 178 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHK 222 + D L G ++ +PGV GIG K+A ++ + S+E +E+ + + + + + Sbjct: 179 EFIDVKALWGDTADNIPGVPGIGEKTAINIIAAYGSIEAAHEHAEDLKPPRAARNIVDFW 238 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQLRL 249 + A L + +A + ID +L ++ Sbjct: 239 DQARLSKTLATIDVHAKIDYDLAAAQI 265 >UniRef50_A0KHE3 Uncharacterized exonuclease xni n=3 Tax=Aeromonadaceae RepID=XNI_AERHH Length = 267 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 117/257 (45%), Positives = 159/257 (61%), Gaps = 13/257 (5%) Query: 4 HLLIVDALNLIRRIHAVQGSPCVE----------TCQHALDQLIMHSQPTHAVAVFDDEN 53 HLLI+DALNLIRR+HAVQ + + +L+ S+PTH +AVFD E Sbjct: 7 HLLIIDALNLIRRLHAVQAQQALTPAQALIATRANLINTCRKLLAASEPTHVIAVFDGEV 66 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 S WR + P YK GR PMP EL + + L+ AF + GV + +EADDL ATLA Sbjct: 67 HS--WRKEVYPAYKEGRTPMPTELREGLNELQDAFWECGVDALLSQTDEADDLIATLATG 124 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 + Q G +ATI+STDKG+CQL+ P ++IRDYF KRWLDA F+++++GV P QL D+W L G Sbjct: 125 IAQHGARATIISTDKGFCQLICPQIQIRDYFNKRWLDAAFVEQQYGVAPAQLVDFWALTG 184 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDIA 232 I S + GV GIGPK+ATQLL ++ L + A K KL H++ A L + + Sbjct: 185 IGGSNIKGVPGIGPKTATQLLQQYGDLASLLAACQQEDAAKALLKLRQHQDEALLAQRLV 244 Query: 233 RLQTDLHIDGNLQQLRL 249 RLQ D+ + NL+++R Sbjct: 245 RLQRDIPLGFNLREIRY 261 >UniRef50_B9YEU0 DNA polymerase I n=2 Tax=Cyanobacteria RepID=B9YEU0_ANAAZ Length = 982 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 27/272 (9%) Query: 4 HLLIVDALNLIRRIH--------------AVQGSPCVETCQHALDQLIMHSQPTHAVAVF 49 ++VD +L R + A + L ++I +P F Sbjct: 20 TFILVDGHSLAFRSYFAFAKGKNGGLRTKAGIPTSVCFGFIKCLLEVITTQKPQAIAVAF 79 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH+ YKA R PE+ ++ L +P ++ G EADD+ T Sbjct: 80 DLGLPT--FRHEADDTYKADRLETPEDFIPDLENLNELLRGLNLPIFTAPGYEADDVLGT 137 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLS--PTLRIRDYFQK---------RWLDAPFIDKEF 158 L+ K + AG++ I+S D+ QL+ + + ++ + A + ++ Sbjct: 138 LSQKASAAGYRVKILSGDRDLFQLIDGDKGITVLNFSPEALKRYANSITEFQAEQVKEKL 197 Query: 159 GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL 218 GV P Q+ D+ L G S +PGV GIG K+A +LL + SL+GIY LD + ++KL Sbjct: 198 GVLPTQIVDFKALCGDKSDNIPGVRGIGEKTAVKLLNTYNSLDGIYAKLDEITGSTQEKL 257 Query: 219 ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 KE A R +A++ D+ ++ NL+ +L Sbjct: 258 IAGKEDASHSRYLAQIVVDVPLEVNLEDCQLT 289 >UniRef50_C0E901 Putative uncharacterized protein (Fragment) n=2 Tax=Clostridiales RepID=C0E901_9CLOT Length = 890 Score = 280 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 17/261 (6%) Query: 2 AVHLLIVDALNLIRR-IHAVQG--------SPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 A+ +L VD +++ R + V+ + V + +D++I +P FD Sbjct: 40 AMKVLAVDGNSILNRSYYGVRNLSNSKGVPTNAVFGFFNVMDKMIKEVEPDCVAVAFDLS 99 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH++ YKAGR MPEEL ++P + + G G EADD+ T A Sbjct: 100 APT--FRHKQYDGYKAGRKGMPEELAVQLPITKELIQLFGYHIVECEGFEADDIMGTFAR 157 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL--DAPFIDKEFGVQPQQLPDYWG 170 + + I + D+ QL+ + +R K + D I +E+GV P +L + Sbjct: 158 LCREQKAECVIATGDRDNLQLVGDGVTVRLATNKEAILFDTDKIVQEYGVTPPELIEVKA 217 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR-KKL---ETHKEMAF 226 L G SS +PGV GIG K+A L+ ++ S+ I ++ + R K L E +E+A Sbjct: 218 LMGDSSDNIPGVKGIGEKTALSLVSKYHSVSYILDHAQELDATTRVKNLLSAEGARELAE 277 Query: 227 LCRDIARLQTDLHIDGNLQQL 247 + R + + + IDG+L Sbjct: 278 MSRMLGTIVDNAPIDGDLSHY 298 >UniRef50_C9RNE9 DNA polymerase I n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNE9_FIBSS Length = 972 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 89/266 (33%), Positives = 133/266 (50%), Gaps = 18/266 (6%) Query: 1 MAVH-LLIVDALNLIRR-IHAVQGSPCV----------ETCQHALDQLIMHSQPTHAVAV 48 MA LL++D+ L R +A +P V A+ +++ +PTH Sbjct: 1 MAEKTLLLLDSFALAFRMFYAYSQNPLVNSKGEDVSMMHGYWGAVLRILAKHKPTHFAIA 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 D + +RH+ PDYKA R PMPEE+ +MP L + E G+P S G EADD+ A Sbjct: 61 RDV-AHTKTFRHELYPDYKANRGPMPEEMAAQMPLLCESMEASGIPLLSEPGYEADDVMA 119 Query: 109 TLAVKVTQAGHQ-ATIVSTDKGYCQLLSPTLRIRDYFQ---KRWLDAPFIDKEFGVQPQQ 164 + A AG I+S DK Q+++ + + + + +++G+ P++ Sbjct: 120 SAAEAAVNAGFDHVVIISKDKDMSQIVTDKIHLFHLEKGADGIDFGPQQVLEKYGIPPEK 179 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHKE 223 + DY L G SS VPGV +GPK+A QLL E+ ++ IY NLD + +K L +KE Sbjct: 180 IRDYLALMGDSSDNVPGVPKVGPKTAIQLLTEYGDMDNIYANLDNIKKKGLHDNLANNKE 239 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRL 249 AFL R++ LQT GNL L Sbjct: 240 QAFLSRELVTLQTKRAYHGNLDALEF 265 >UniRef50_C1TPP4 DNA polymerase I n=2 Tax=Synergistaceae RepID=C1TPP4_9BACT Length = 854 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 17/259 (6%) Query: 1 MAV-HLLIVDALNLIRR-------IHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFD 50 M ++ VD L R + A G+P + + L ++ P VFD Sbjct: 1 MTEGPIMFVDGHGLAFRAFYAIPELTAPDGTPTNALVGFFNMLSKIKKEWAPQSLSVVFD 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 ++ +RH+ +YK GR P PEE ++P L+ G+P G EADD+ + Sbjct: 61 APGKT--FRHEMFEEYKKGRKPTPEEFKVQLPILKKMLGLLGIPVICRPGVEADDVIGAV 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLP 166 + + G +V++DK Q+L + + + DA E+G P ++ Sbjct: 119 SREYAYKGTPVLVVTSDKDMLQILDEGITVIRPGKGISSFNRWDAETFQGEYGFPPARMA 178 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 DY L G S VPGV GIG K+A +LL ++ LEGI + + RKKLE + ++A Sbjct: 179 DYLALVGDSVDNVPGVPGIGDKTARRLLGKYGDLEGILAHTADLTAGQRKKLEENADLAR 238 Query: 227 LCRDIARLQTD-LHIDGNL 244 + L D D +L Sbjct: 239 KSLILTTLSVDGAPDDVDL 257 >UniRef50_C5B5N3 DNA polymerase I n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5N3_METEA Length = 957 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 90/277 (32%), Positives = 123/277 (44%), Gaps = 32/277 (11%) Query: 4 HLLIVDALNLIRRIHA-------------VQGSP--CVETCQHALDQLIMHSQ----PTH 44 L++VDA + + R + G P L Q + PTH Sbjct: 12 RLILVDASSFVFRAYHQSLNQDPKYNARPSDGLPTGAARLFFAKLFQFVRDGAAGVVPTH 71 Query: 45 AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEAD 104 VFD +R R Q P+YKA R P +L +MP +R A G+P EAD Sbjct: 72 LGIVFDKGSR-ESHRRQLYPEYKANRSETPADLRPQMPLVREAVRAFGLPVIELDRTEAD 130 Query: 105 DLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRD----------YFQKRWLDAPFI 154 DL AT A G + IVS DK QL+SP +R D Y +R LD + Sbjct: 131 DLIATYARAAEAKGAEVVIVSADKDLQQLVSPRIRFYDAESGSKGKPGYRPERNLDVEAV 190 Query: 155 DKEF-GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-E 212 ++ G+QP Q+ D L G +S +PGV GIG K+A QLL+E+ SLE + E A+ Sbjct: 191 VAKWEGLQPGQIGDALALIGDTSDNIPGVPGIGLKTAAQLLLEYGSLEALLEGASAIKQP 250 Query: 213 KWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 K R+ L E A L R + L + + + L L Sbjct: 251 KRRENLLAAAEGARLSRRLVELDCSVDLPVDPDTLAL 287 >UniRef50_Q8NWQ2 MW1329 protein n=63 Tax=Staphylococcaceae RepID=Q8NWQ2_STAAW Length = 292 Score = 279 bits (714), Expect = 7e-74, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 20/258 (7%) Query: 1 MAVHLLIVDALNLIRR-----------IHAVQGSPC--VETCQHALDQLIMHSQPTHAVA 47 M +L+VD + L+ R ++ QG P ++ + I +PTH Sbjct: 1 MPNKILLVDGMALLFRHFYATSLHKQFMYNSQGVPTNGIQGFVRHIFSAIHEIRPTHVAV 60 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 +D S +R+ YK R PEEL + ++ EQ G EADD+ Sbjct: 61 CWDMGQ--STFRNDMFDGYKQNRSAPPEELIPQFDYVKEISEQFGFVNIGVKNYEADDVI 118 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQ 163 TLA + + I++ DK Q ++ + + + ++E+ ++PQ Sbjct: 119 GTLAQQYSTDND-VYIITGDKDLLQCINDNVEVWLIKKGFNIYNRYTLHRFNEEYALEPQ 177 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 QL D G ++ GV GIG K+A +L+ ++QS+E + EN+DA++ R K+ + + Sbjct: 178 QLIDIKAFMGDTADGYAGVKGIGEKTAIKLIQQYQSVENVVENIDALSAGQRNKINDNLD 237 Query: 224 MAFLCRDIARLQTDLHID 241 +L + +A + T + ID Sbjct: 238 ELYLSKRLAEIHTQVPID 255 >UniRef50_A7HJZ2 DNA polymerase I n=11 Tax=Bacteria RepID=A7HJZ2_FERNB Length = 898 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 120/269 (44%), Gaps = 24/269 (8%) Query: 1 MAVHLLIVDALNLIRRIHAVQ----------GSPCVETCQHALDQLIMHS---QPTHAVA 47 MA + + D L+ R + + + L + + + Sbjct: 1 MA-RVFLFDGTGLLYRAYFAIDQSLTTTSGVPTNALYGLSRMLVKFLKEHVIINEDYCAF 59 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 + D + S +R + DYKA RP PE L ++ E G+ G EADD+ Sbjct: 60 MLDVKG-GSTYRKELYADYKAHRPETPEPLLKQISLADELIEGFGIKLIKVPGYEADDVI 118 Query: 108 ATLAVKVTQAGH-----QATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEF 158 ATLA K + + I+++DK QL++ + + + + I +++ Sbjct: 119 ATLAKKFEKEKQKYNISEINIITSDKDMLQLVNENIFVWRVEKGVTDLKKYTNNEIIEKY 178 Query: 159 GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL 218 G+ +Q+ DY L G S +PGV+GIG K+A ++L EF S+E +N+ + EK R + Sbjct: 179 GITSEQIKDYLALVGDVSDNIPGVSGIGEKTAAKILNEFGSVENALKNISKLPEKIRNAI 238 Query: 219 ETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 E + E L R + L T++ I ++++L Sbjct: 239 ENNIEDFELSRKLVELNTNVEIKIDIEEL 267 >UniRef50_A9BEU8 DNA polymerase I n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEU8_PETMO Length = 896 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 125/263 (47%), Gaps = 20/263 (7%) Query: 1 MAVHLLIVDALNLIRRIHAVQG----------SPCVETCQHALDQLIMHSQP---THAVA 47 MA +L ++D + R G + + L +L+ + Sbjct: 1 MA-NLYLIDGSGIAYRAFFALGDWMSTSDGLPTNAIYGVARMLLKLLKEYVKKGEDSIIF 59 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 V D +++ +RH+ L YKA RP PE+ ++P + E+ G+ + EADD+ Sbjct: 60 VMD--KKTTTYRHELLESYKAQRPETPEKYIQQIPYIYEMVEKLGIKLVAMDNYEADDVI 117 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQ 163 AT+ K + I+++DK QL+ + I Q DA ++K+ GV P+ Sbjct: 118 ATIVSKKKRNYDNVYIITSDKDMMQLVKDNVYILRPEQGITEMVKYDAQQVEKKMGVPPE 177 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 ++ D L G SS +PGV GIG K+A +LL ++ +++ +Y++LD + + KL+ KE Sbjct: 178 KIADLLALMGDSSDNIPGVKGIGIKTAQKLLQDYDNIDDLYQHLDEIKGSTKNKLKNEKE 237 Query: 224 MAFLCRDIARLQTDLHIDGNLQQ 246 A+L + + +L D I+ + Sbjct: 238 TAYLSKKLVQLMVDAPIEEIFED 260 >UniRef50_UPI0001C17162 DNA polymerase A n=2 Tax=Nostocaceae RepID=UPI0001C17162 Length = 988 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 27/272 (9%) Query: 4 HLLIVDALNLIRRIHAV--------------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 +++VD +L R + + L +I+ QP F Sbjct: 12 TIILVDGHSLAFRSYFAFAKSRAGGLRTKSGIPTNVCFGFMQCLLDVIVKEQPQAIAVAF 71 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH+ +YKA R PE+ ++ L E + + G EADD+ T Sbjct: 72 DLAAPT--FRHEADSNYKANRADTPEDFIPDLVNLYDLLEALNIQVITQPGYEADDILGT 129 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPT--LRIRDYFQK---------RWLDAPFIDKEF 158 LA +G++ I+S D+ QL+ + + ++ + + + ++ Sbjct: 130 LAETSVCSGYRVKILSGDRDLFQLIDENKGISVLNFTPEALKSSSNGIKEFHTLDVKEKL 189 Query: 159 GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL 218 GV P Q+ D+ L G +S +PGV GIG K+A +LL ++SL IY N++ + ++KL Sbjct: 190 GVLPTQVVDFKALCGDTSDNIPGVKGIGEKTAVKLLNIYKSLTEIYANINKITGANQQKL 249 Query: 219 ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 +E AF + +A++ TD+ I +Q L Sbjct: 250 IAGQESAFHSQYLAKIVTDVPITIKIQDCHLK 281 >UniRef50_C9Y9S8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9S8_9BURK Length = 430 Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats. Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 2/225 (0%) Query: 23 SPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMP 82 + V + ++ L + VFD + +R + P+YKA R PMP++L ++ Sbjct: 50 TGAVRIMINMMNSLRKEYPADYVACVFDA--KGPTFRDEIYPEYKAHRDPMPDDLRSQIA 107 Query: 83 ALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRD 142 + G G EADD+ TLA G + + S DK QL++ + I D Sbjct: 108 PIHEIVRLLGWKVLDVPGVEADDVIGTLAATAASQGIEVIVSSGDKDLAQLVNEHITIID 167 Query: 143 YFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEG 202 + D ++ EFGV + + DY L G + VPGVA +GPK+A + L ++ SL+G Sbjct: 168 TMNGKRRDLAGVEAEFGVPARLMLDYQTLVGDTVDNVPGVAKVGPKTAVKWLQQYGSLQG 227 Query: 203 IYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 + +N + + L + R + ++TD + G + L Sbjct: 228 VVDNAANIGGVVGENLRKALDWLPTGRTLLTIKTDCDLTGWVDGL 272 >UniRef50_UPI0001C32326 DNA polymerase I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32326 Length = 884 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 18/258 (6%) Query: 2 AVHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 L ++D +L R + + L +++ P + +D Sbjct: 25 PDELFLIDGNSLAYRAFFALPESIATSTGFPTNAIFGFASMLVKILTEYGPRATIVAWD- 83 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 R R + P+YKA R P+ + P L E G S G EADD+ ATLA Sbjct: 84 --RGHSGRREVYPEYKAQRSSRPDLFKQQWPHLEPLVESFGYQNVSLDGYEADDVIATLA 141 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPD 167 + AG +V+ D+ QL+ ++I R + R D + +G+ P+ +PD Sbjct: 142 ERAKAAGIPVMVVTGDRDSFQLVDEGVQIMATSRGITETRTYDRQGVIDRYGIPPELVPD 201 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAF 226 + GL G +S +PGV GIG K+A QLL +F LEG+ N + A K R+ L H E A Sbjct: 202 FIGLKGDTSDNIPGVPGIGDKTAAQLLNDFGDLEGVLANAHTIRARKRRENLIEHAEDAR 261 Query: 227 LCRDIARLQTDLHIDGNL 244 + + +A ++ DL + ++ Sbjct: 262 VSKQLATMRRDLEVAIDV 279 >UniRef50_Q9HT80 DNA polymerase I n=9 Tax=Gammaproteobacteria RepID=DPO1_PSEAE Length = 913 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 19/261 (7%) Query: 4 HLLIVDALNLIRR-IHAV------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENR 54 L++VD + + R HA+ G P V+ + L L + VFD + Sbjct: 5 PLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFDA--K 62 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 +R + +YKA RP MP++L ++ L A+ G+P G EADD+ TLA Sbjct: 63 GPTFRDELFAEYKANRPSMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLARSS 122 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 A I + DK QL+ + + + LD + ++FGV P+ + D+ L G Sbjct: 123 AAADRPVVISTGDKDMAQLVDGHITLVNTMTGSRLDVDGVKEKFGVGPELIIDFLALMGD 182 Query: 175 SSSKVPGVAGIGPKSATQLLVE--------FQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 +PGV G+G K+A LL + SL+ + E A+ KLE ++E AF Sbjct: 183 KVDNIPGVPGVGEKTALGLLTGVGGGLEVLYASLDKVPELPIRGAKGLPAKLEENREQAF 242 Query: 227 LCRDIARLQTDLHIDGNLQQL 247 L +A ++TD+ +D + +L Sbjct: 243 LSYQLATIKTDVELDVEIDKL 263 >UniRef50_Q118S8 DNA polymerase I n=4 Tax=Cyanobacteria RepID=Q118S8_TRIEI Length = 1045 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 23/267 (8%) Query: 6 LIVDALNLIRRIHAV------------QGSPCV--ETCQHALDQLIMHSQPTHAVAVFDD 51 L VD +L R + G P +L ++I +P + FD Sbjct: 9 LFVDGHSLAFRSYYAFAKSRNGGLKTSTGIPTSICFGFLKSLLEVINTQKPEYLAIAFDL 68 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH+ +YKA RP PE+L ++ L+ + + + G EADD+ TLA Sbjct: 69 GKPT--FRHEADKNYKADRPEPPEDLIIDLGNLQDLLKAFNLTVITAPGYEADDILGTLA 126 Query: 112 VKVTQAGHQATIVSTDKGYCQLLS--PTLRIRDYFQKRW-----LDAPFIDKEFGVQPQQ 164 K + G + I+S D+ QL+ + + + + ++ G+ P Q Sbjct: 127 KKASATGFKVKILSGDQDLFQLIDAEKGISVLHLPGGKGSIPQEFFPEEVKEKLGILPTQ 186 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + DY L G S +PGV GIG K+A +LL E+ L IY +L+ + +KKL K Sbjct: 187 VVDYKALCGDKSDNIPGVRGIGQKTAVKLLNEYGCLSEIYASLEQIKGANKKKLVLGKTE 246 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRLVR 251 A + +A+++ ++ ++ +++ + + Sbjct: 247 AEHSQFMAKIEVNVPLNIDIEDCKFKK 273 >UniRef50_B1VB35 DNA polymerase I n=1 Tax=Candidatus Phytoplasma australiense RepID=B1VB35_PHYAS Length = 676 Score = 276 bits (708), Expect = 4e-73, Method: Composition-based stats. Identities = 65/266 (24%), Positives = 126/266 (47%), Gaps = 21/266 (7%) Query: 3 VHLLIVDALNLIRRIHAVQG--------------SPCVETCQHALDQLIMHSQPTHAVAV 48 HL++VD +L+ R + + + + ++++ ++ + + Sbjct: 2 QHLVLVDGNSLVFRAYHATANNGKKLLQNKKGVYTNALLSFIKMFEKILEQTK-NYILVA 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + + RHQ +YK GRP P+EL D++P ++ +GV + EADD+ Sbjct: 61 FDTHHPTK--RHQMYDNYKKGRPETPQELIDQIPLIKKYLTLKGVKHHFQAEFEADDIIG 118 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQ 164 TLA + + +I S+D+ QL+ + + + + + +E+G++ Q Sbjct: 119 TLAKMASNKNIKVSIYSSDQDLLQLVDTNTSVYLIKKGLKLIKHYNPKTLLEEYGLKEYQ 178 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + DY L G SS + GVAGIGPK+A LL + +L+ + +LDA+ ++K+ E Sbjct: 179 MIDYKALMGDSSDNIKGVAGIGPKTAKNLLQTYDNLDNLLSHLDAIKPSLKEKINNCMED 238 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRLV 250 L + + + T + + L+Q + Sbjct: 239 LKLSKILTTIDTKVPLPFELEQTEIK 264 >UniRef50_A1SYB8 Uncharacterized exonuclease xni n=2 Tax=Psychromonas RepID=XNI_PSYIN Length = 262 Score = 276 bits (708), Expect = 4e-73, Method: Composition-based stats. Identities = 103/260 (39%), Positives = 153/260 (58%), Gaps = 12/260 (4%) Query: 1 MAVHLLIVDALNLIRRIHAVQG-----SPCV-----ETCQHALDQLIMHSQPTHAVAVFD 50 M LLI+DA+NL+RRI+AVQ +P T +AL +L+ QPTHA+ VFD Sbjct: 1 MISTLLIIDAMNLVRRIYAVQQKQHGDTPTALIATQSTTTNALKKLLRIHQPTHAICVFD 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + + WRHQ P+YK GR P+PE L +PA++ F G+ T +EADDL A L Sbjct: 61 --SHAPSWRHQIYPEYKQGRKPIPELLKQGLPAIQEQFFDLGIDSLVTEEDEADDLIACL 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 A K+ + + IVSTDKG+ QLL+ ++++ DYFQ ++ + ++ G+ QQL DYW Sbjct: 119 ADKIAKQQQKCIIVSTDKGFYQLLNESIQLYDYFQNSFVIRQQVHQKMGISIQQLNDYWA 178 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 + GISSS + GV GIG K A LL ++ SL I++ + K K+++ + A L + Sbjct: 179 ITGISSSAIKGVEGIGSKGALSLLQQYGSLNNIFQQAEDSNNKLLTKIKSQQSNAILAKQ 238 Query: 231 IARLQTDLHIDGNLQQLRLV 250 + L+TD+ + NL+ LR Sbjct: 239 LVTLKTDIKLGFNLKDLRYT 258 >UniRef50_B7FRK5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FRK5_PHATR Length = 389 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 81/260 (31%), Positives = 130/260 (50%), Gaps = 23/260 (8%) Query: 2 AVHLLIVDALNLIRRIHAV-------QGSP--CVETCQHA-----LDQLIMHSQPTHAVA 47 + L++VDA I R + G P V L++++ +P V Sbjct: 58 SDPLILVDASAYIFRAYYSMPPIHRSDGMPTGAVMGFCSMIMRLILNRIVEGERP-RLVL 116 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 VFD + ++ +RH P+YK RP P +L + +R A + G+P + EADD+ Sbjct: 117 VFDAKGKT--FRHSLYPEYKGNRPDAPVDLVPQFALVREAAKAYGIPQIEAATFEADDVI 174 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLS-----PTLRIRDYFQKRWLDAPFIDKEFGVQP 162 ATLA + G I+S DK QL++ P++ + D + + +++G P Sbjct: 175 ATLATMAIEEGIDTNILSGDKDLWQLITDREEIPSVHMIDPMTMGRITYDEVVEKWGCGP 234 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETH 221 + L D LAG S+ VPGV GIGPK A L+ EF SLE + N+D V ++ R+KL+ + Sbjct: 235 RLLGDILALAGDSADNVPGVPGIGPKIAALLIEEFGSLEKLLANVDTVKQRARREKLKAN 294 Query: 222 KEMAFLCRDIARLQTDLHID 241 ++ A L R + L+ D+ +D Sbjct: 295 EQQARLSRVLVDLRRDVPMD 314 >UniRef50_D1R879 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R879_9CHLA Length = 896 Score = 276 bits (707), Expect = 5e-73, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 12/252 (4%) Query: 4 HLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 +L ++DA + R + + + + ++ +L P H V VFD N Sbjct: 9 NLYVLDASGFLYRSYFAIRNMTNKQGESTNALYGFIRSVLKLFKDFNPEHLVCVFDGPNN 68 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + R + P+YKA R MP +L ++ + G+P S EADD T+A Sbjct: 69 AKK-RLELYPNYKAHRSAMPPDLRYQIEWAQDFCSLMGIPYLSVPEVEADDTMGTVAKWA 127 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQ-KRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 Q G + ++DK QL++P + + + + LDA I+KE+GV P Q+ D + G Sbjct: 128 EQQGAITYLCTSDKDMAQLVNPHVFLLNTHKDNTILDAASIEKEWGVPPSQMVDLLAMTG 187 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR-KKLETHKEMAFLCRDIA 232 +S +PG+ G G K+A LL +F SL+ I + + V K + + L+T ++A + RD+ Sbjct: 188 DASDNIPGLTGFGEKTAAALLRQFGSLDYILAHPEEVPGKKKQETLQTEADLARISRDLV 247 Query: 233 RLQTDLHIDGNL 244 + + I + Sbjct: 248 TIDLSVEIPQEI 259 >UniRef50_B0KVB0 Putative 5'-3' exonuclease n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVB0_9BACT Length = 306 Score = 276 bits (706), Expect = 6e-73, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 17/261 (6%) Query: 3 VHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LLI+D N + R + Q + + L ++ +P + VA D Sbjct: 2 KKLLIIDTFNFLHRAYHALPKTFRGPDGQPTNAIYGFTSMLINVLNQIKPDYVVAALD-- 59 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R YKA R PM E+L ++P + + + G EADD+ T+A Sbjct: 60 GKEPTFRVGEFTAYKAQRKPMEEDLQTQIPKVFEVLDAFNIKKIVVEGYEADDVIGTVAT 119 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK---RWLDAPFIDKEFGVQPQQLPDYW 169 K+ I+S D+ QL I +K WL +D + G + ++ DY Sbjct: 120 KLKGK-VDILIISNDRDLWQLAGNGNIIMVPGKKGEFEWLGEKEVDAKLGFEADKIADYK 178 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLC 228 GL G S +PGV G+G +AT+LL ++ SLE IY N++ + E +KKL E A + Sbjct: 179 GLRGDPSDNIPGVFGVGEVTATKLLQKYGSLEEIYRNIEKIEPESLKKKLLESYEQALMS 238 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 + +A++ D+ NL++ + Sbjct: 239 KRLAQIVLDVPFQINLEECKY 259 >UniRef50_C5RBK8 DNA polymerase I n=9 Tax=Lactobacillales RepID=C5RBK8_WEIPA Length = 931 Score = 276 bits (706), Expect = 6e-73, Method: Composition-based stats. Identities = 77/267 (28%), Positives = 129/267 (48%), Gaps = 22/267 (8%) Query: 1 MAV-HLLIVDALNLIRRI-------------HAVQGSPCVETCQHALDQLIMHSQPTHAV 46 MA LL++D +L R H + + + LD +I P A+ Sbjct: 33 MAKPTLLLIDGNSLAFRAFYALINQVDRFVNHEGLHTNALVGFNNLLDGIIDPFNPDLAL 92 Query: 47 AVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDL 106 +D + +R + +YK R P+EL ++ LR E G+ + G EADD+ Sbjct: 93 VAWDAGK--TTFRTGKFDNYKGNRDNTPQELVEQFEPLRKMVELHGIKSYELPGFEADDI 150 Query: 107 AATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEF-GVQ 161 T+A + G+ TIV+ D+ QL+S + + + I + + G++ Sbjct: 151 IGTMARLGEENGYSVTIVTGDRDMTQLVSDDITVWVTKKGISEIDHYTPAMIAELYDGLE 210 Query: 162 PQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLET 220 P+Q+ D GL G +S PGVAGIGPK+A +L+ ++ S+ +YE +D + K ++KL Sbjct: 211 PKQIVDIKGLQGDTSDNYPGVAGIGPKTALKLIKQYHSIPEMYEQIDEMKASKQKEKLVN 270 Query: 221 HKEMAFLCRDIARLQTDLHIDGNLQQL 247 K+ A L RD+A++ TD + +L L Sbjct: 271 GKQDAMLSRDLAKILTDAPVTISLSDL 297 >UniRef50_Q6KHF6 DNA polymerase I n=1 Tax=Mycoplasma mobile RepID=Q6KHF6_MYCMO Length = 295 Score = 276 bits (706), Expect = 7e-73, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 136/267 (50%), Gaps = 20/267 (7%) Query: 1 MAV-HLLIVDALNLIRR---IHAVQG----------SPCVETCQHALDQLIMHSQPTHAV 46 M++ +L++D L + A G + V T + + +L+ PTH Sbjct: 1 MSMNKILLIDGNLLAFKSFFATAYIGSSLQTSTGIPTNAVHTFINTIFKLLKELNPTHIF 60 Query: 47 AVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDL 106 FD ++ +RH+ +YK+ R P+ L + ++ + + + S EADDL Sbjct: 61 VAFDKPGKT--FRHEFFEEYKSKRQSTPDSLKVQFIYIKRVLSKMRICWFEESLIEADDL 118 Query: 107 AATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL---DAPFIDKEFGVQPQ 163 AT K+ + + + S+DK QL++ + + + K + + + P Sbjct: 119 IATWVSKINTSKDEVIVYSSDKDLLQLVAKNVSVISKWDKNEYVIDNENNFFERHSIFPN 178 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHK 222 Q+PD+ LAG +S G++GIGPK+A LL EFQ +E +YENL + +K ++ LE K Sbjct: 179 QIPDFKALAGDASDNYLGISGIGPKTAINLLSEFQIIENLYENLANIKSKKVKEVLELEK 238 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQLRL 249 + AFL + IA+L+TD++++ +L+ ++L Sbjct: 239 DKAFLYKKIAKLKTDVNLNFSLEDIKL 265 >UniRef50_A3EQ00 DNA polymerase I n=3 Tax=Leptospirillum RepID=A3EQ00_9BACT Length = 872 Score = 275 bits (705), Expect = 8e-73, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 125/264 (47%), Gaps = 18/264 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L+++D I R + + + + + L ++ P+ VF E Sbjct: 23 PSTLVLMDGFGYIFRAYHSRVTFVTRAGLPTDAITVFGNMLLSVLKELSPSAMAVVF--E 80 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +R+ R + LP+ KA RP P + ++P + GVP ST G EADD A LA+ Sbjct: 81 SRTGNVRSEILPEIKANRPEPPSDFLQQIPYIERLIRGIGVPLLSTDGYEADDTIAALAL 140 Query: 113 KVTQAGH------QATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLP 166 K ++S+DK L+S + + D K+ L + +++GV+P Q+P Sbjct: 141 KWLNHHDRTNVPCHVVVLSSDKDLLTLVSERVWVYDPMTKKVLGPSDVREKWGVEPWQIP 200 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDA-VAEKWRKKLETHKEMA 225 D L G ++ +PGV GIG K+A +LL +++ +YE+LD V E+ R L H+E Sbjct: 201 DLLALTGDTADNIPGVPGIGQKTAAKLLGNQGTIDTLYEDLDNVVPERIRALLREHRERV 260 Query: 226 FLCRDIARLQTDLHIDGNLQQLRL 249 F + + L +DL + + L L Sbjct: 261 FRNKKVTVLHSDLALSLEPESLSL 284 >UniRef50_Q1N615 Exonuclease IX n=1 Tax=Bermanella marisrubri RepID=Q1N615_9GAMM Length = 263 Score = 275 bits (705), Expect = 9e-73, Method: Composition-based stats. Identities = 97/254 (38%), Positives = 144/254 (56%), Gaps = 8/254 (3%) Query: 3 VHLLIVDALNLIRRIHAVQG------SPCVETCQHALDQLIMHSQPTHAVAVFDDENRSS 56 + +L+ DA+NLIRRI+A Q + Q+A+ + I H +P+H VFD +++ Sbjct: 1 MDVLLFDAMNLIRRIYATQQDKPDGVENTLLLSQNAMLKDIEHFRPSHVACVFDGHSKT- 59 Query: 57 GWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQ 116 WRH P YKA R PMP++L +P FEQ G+ C EADD+ ATLAVK Q Sbjct: 60 -WRHTIYPAYKANRNPMPKDLSAALPEFHRRFEQIGIRCLLYDYLEADDVIATLAVKSQQ 118 Query: 117 AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISS 176 G IVSTDKGY Q++ + +F ++ L+ + G +P QL D+ L G S+ Sbjct: 119 RGKSVCIVSTDKGYMQIMDEQTSLYHHFDRKQLNLDDVRSILGFEPSQLVDFLSLVGDST 178 Query: 177 SKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQT 236 ++VPGV GIG K+A +LL +F L+ I + D ++ K ++LE H +A R + L+T Sbjct: 179 NEVPGVDGIGQKTAGKLLDQFGDLDSILIHSDEISGKVGRQLENHFRIALRARKMVTLKT 238 Query: 237 DLHIDGNLQQLRLV 250 D + NL+ LR + Sbjct: 239 DCELAINLKGLRYL 252 >UniRef50_D1AZX7 DNA polymerase I n=3 Tax=Campylobacterales RepID=D1AZX7_SULD5 Length = 885 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 13/256 (5%) Query: 3 VHLLIVDALNLIRRIH-------AVQGSPC--VETCQHALDQLIMHSQPTHAVAVFDDEN 53 L I+D R + QG P + + + + + +F ++ Sbjct: 2 KTLTIIDTFGFFFRNYYALPQLRNSQGFPTGLLTGFANFIYAIKNEHDTDY--VMFALDS 59 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH+ P+YKA RP PEEL ++P + E+ G C+S G EADD+ A+ Sbjct: 60 KGKNFRHELDPNYKANRPEAPEELKKQLPVAISWIEKMGFKCYSEEGFEADDVIASAVKF 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSPT-LRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 + G + IV+ DK QL+ + I D +K +D+ ++FGV P ++ +Y L Sbjct: 120 AKRHGIKVRIVTHDKDLYQLIDDGRVVIYDPMKKIEIDSEKCFEKFGVYPDKINEYLSLV 179 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLCRDI 231 G ++ +PGV GIGPK A +LL +F S+E IY NL+ +A + + LE +E AFL + + Sbjct: 180 GDTADNIPGVKGIGPKGAKKLLDDFGSVENIYANLERIANPRSKSMLEEGRESAFLSKQL 239 Query: 232 ARLQTDLHIDGNLQQL 247 RL L+I + Sbjct: 240 VRLDDSLNIADTFEAF 255 >UniRef50_Q67KY2 DNA polymerase I n=1 Tax=Symbiobacterium thermophilum RepID=Q67KY2_SYMTH Length = 283 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 73/256 (28%), Positives = 114/256 (44%), Gaps = 12/256 (4%) Query: 5 LLIVDALNLIRRIHA------VQGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRSS 56 +L+VD + R A +G P V L +L+ +P+H D + Sbjct: 1 MLLVDGGLMFRTFFALPPMTDPKGRPVNAVYGFVSMLLRLLATLRPSHVAVAADSPV-AE 59 Query: 57 GWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQ 116 R P YKA RP P +L + LR + G EADDL T+A Sbjct: 60 NRRAVLYPPYKANRPECPPDLAPQFALLREVLAALNITVVGVRGYEADDLMGTMARMAEA 119 Query: 117 AGHQATIVSTDKGYCQLLSPTL---RIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 G + +++ D+ QLLS ++ Q D E+G+ P QL D GLAG Sbjct: 120 EGMEVILLTGDRDAFQLLSGRTAVQYVKRLNQTITYDVARFVTEWGILPSQLADLKGLAG 179 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR 233 +S +PG+ GIGPK+A +LL ++ +LE + + A K R++LE +E+A L + +A Sbjct: 180 DASDNIPGIRGIGPKTAVRLLQQYVTLEAVLAHAHAQPGKLRQRLEEGREIALLSKRLAT 239 Query: 234 LQTDLHIDGNLQQLRL 249 + + + L Sbjct: 240 IDRHVPVSCTPGACAL 255 >UniRef50_Q1LTX9 DNA polymerase I n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=Q1LTX9_BAUCH Length = 306 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 18/259 (6%) Query: 5 LLIVDA-LNLIRRIHAVQ------GSP--CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 LL+VD L R HA G P + + L+ L + +FD + Sbjct: 2 LLLVDGSFYLYRAYHAFPLLTNNLGEPTGAIYGVINMLNSLFKQYSTSSIAIIFDAYGQ- 60 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +RH+ DYK R M ++L ++ L + G+P G E+DD+ TLA + Sbjct: 61 -NFRHKIFHDYKLNRTRMSKDLSCQIDPLYKIIQSMGLPLLVVKGVESDDVIGTLAHQAM 119 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 I + DK QL+SP + + + L + K+FGV P+ + DY L G Sbjct: 120 CNNINVLISTGDKDMAQLVSPKIHLFNSTMNMRLGPKEVQKKFGVLPELIIDYIALVGDK 179 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEMAFLC 228 S +PGV GIG K+A LL +F L+ +Y+NL + + KL+ ++E AFL Sbjct: 180 SDNIPGVPGIGKKTAKILLQQFGGLKFLYQNLHKLNHFNLCRNKNLATKLDNYREKAFLS 239 Query: 229 RDIARLQTDLHIDGNLQQL 247 +A ++T++ +D QL Sbjct: 240 YQLATIRTNVMLDITYDQL 258 >UniRef50_A0RC28 5'-3' exonuclease n=75 Tax=Bacillus RepID=A0RC28_BACAH Length = 301 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 115/261 (44%), Gaps = 20/261 (7%) Query: 3 VHLLIVDALNLIRRIHAV-----------QGSPC--VETCQHALDQLIMHSQPTHAVAVF 49 +L+VD + L+ R G+P + L + +PTH V + Sbjct: 15 KKVLLVDGMALLFRAFYATSVYGQFMKRQDGTPTNGIHGYMKHLLTAMQAIEPTHIVTCW 74 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D S+ +R + +YKA R PEEL + ++ + VP G EADD T Sbjct: 75 DMG--STTFRTESFSNYKANRAAPPEELIPQFDLVQEMTAKLSVPVIGMKGYEADDCIGT 132 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQL 165 LA + + I++ D QL+ + + + + I +E GV+P Q+ Sbjct: 133 LAKQYCNE-AEVYILTGDTDLLQLVDKNVTVMLLRKGMGNYEYYTPEKIMEEKGVEPWQI 191 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 G +S PGV GIG K+A +L+ E ++ + EN+ ++ + R K+E+ E Sbjct: 192 VHAKAFMGDTSDNYPGVKGIGEKTAYKLIQEHGTVATVLENVASLTKAQRTKIESDLENL 251 Query: 226 FLCRDIARLQTDLHIDGNLQQ 246 + +A++ ++ I +L++ Sbjct: 252 NISLQLAQIHCEVPISCSLEE 272 >UniRef50_B0SCM1 DNA-directed DNA polymerase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCM1_LEPBA Length = 942 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 122/267 (45%), Gaps = 21/267 (7%) Query: 1 MAVHLLIVDAL-------------NLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVA 47 M+ LLI+D NL + S + L +L+ TH Sbjct: 1 MSGRLLIIDGHALAFRAYFAFAASNLTNSKTGLP-SGAIFGFWRMLFKLLQDEHVTHIAF 59 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 FD R R+ +YKA R PMPE+L ++ + + P + +G EADD+ Sbjct: 60 TFDPGTRLE--RNDLYEEYKAHRKPMPEDLKPQIQKIYEMLQALEFPMYKINGIEADDII 117 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQ 163 +L K + + I+S+DK Q+L + + R + +D ++ G+ + Sbjct: 118 GSLCKKFGKDFEEIVILSSDKDLYQVLDKNIHMLRGKRGVSEFEKIDPKWVKTNIGITKE 177 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHK 222 Q+ DY L G +S +PGV GIG K A +L+ EF LE IY+ +D V K KL K Sbjct: 178 QVTDYMALLGDASDNIPGVKGIGEKGAAKLIQEFGDLETIYKKIDKVKNKSLIDKLIADK 237 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQLRL 249 E AFL R +A + T+L +D L+L Sbjct: 238 ENAFLSRKLATIVTNLKLDIKKSDLKL 264 >UniRef50_B5RMA2 DNA polymerase I n=2 Tax=Borrelia RepID=B5RMA2_BORDL Length = 922 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 130/262 (49%), Gaps = 17/262 (6%) Query: 1 MAVHLLIVDALNLIRR-IHAVQGSPCVE----------TCQHALDQLIMHSQPTHAVAVF 49 M + ++DALN+I R H ++ +P L +I +P + + F Sbjct: 1 MKE-IYLIDALNIIFRNYHVMKNNPLTNSKGENVSAFIGFFKTLFFIIKEKKPENLIVTF 59 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D E + +R ++ P YKA R P+ L ++ ++ + +P + G EADDL A+ Sbjct: 60 DSE--TQTFRQKQYPSYKATRDAPPDNLIPQIHWIKEGLIKANIPMFELQGYEADDLIAS 117 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW--LDAPFIDKEFGVQPQQLPD 167 K Q + I+S DK QL+S +I + ++ ++ K+FG+ Q+ D Sbjct: 118 FTKKAEQNNYLTYIISPDKDLLQLISNQTKIFKIENSSFLEMNNDYVIKKFGINKSQIKD 177 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 Y + G S +PG+ GIG K A++LL EF +L GIYENL + K+R+ L KE AFL Sbjct: 178 YLSIVGDPSDNIPGIKGIGQKGASKLLNEFHTLNGIYENLSLINNKYREILLREKENAFL 237 Query: 228 CRDIARLQTDLHIDGNLQQLRL 249 + L DL + +L+ RL Sbjct: 238 SYKLISLVEDLELP-SLETFRL 258 >UniRef50_A1QZY0 DNA polymerase I n=1 Tax=Borrelia turicatae 91E135 RepID=A1QZY0_BORT9 Length = 919 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 82/260 (31%), Positives = 132/260 (50%), Gaps = 16/260 (6%) Query: 3 VHLLIVDALNLIRR-IHAVQGSPCVE----------TCQHALDQLIMHSQPTHAVAVFDD 51 + ++DALN+I R H ++ +P L +I P + + FD Sbjct: 2 KEIYLIDALNIIFRNYHVMKNNPLTNKKGENVNAFIGFFKTLFFIIKEKNPENLIVTFDS 61 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 E + +R Q+ P YKA R P+ L ++ ++ + + +P + G EADDL A+ A Sbjct: 62 E--TQTFRQQKYPSYKATRDAPPDNLIPQIYWIKESLIKANIPMFEIQGYEADDLIASFA 119 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW--LDAPFIDKEFGVQPQQLPDYW 169 K + I+S DK QL+S +I + +D ++ K+FGV Q+ DY Sbjct: 120 KKAEINNYLTYIISPDKDLLQLMSAKTKILKIENSSFVEMDNDYVMKKFGVNKSQIKDYL 179 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 + G S +PG+ GIG K A +LL EFQ+L GIY+NLD++ K+R+ L +E AFL Sbjct: 180 SIVGDRSDNIPGIKGIGEKGAAKLLNEFQTLNGIYDNLDSINNKYREILLKERENAFLSY 239 Query: 230 DIARLQTDLHIDGNLQQLRL 249 ++ L DL + L++ +L Sbjct: 240 ELISLVEDLELPA-LEKFKL 258 >UniRef50_C7RDU0 DNA polymerase I n=3 Tax=Anaerococcus RepID=C7RDU0_ANAPD Length = 879 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 67/264 (25%), Positives = 130/264 (49%), Gaps = 16/264 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ ++++D +LI R + V + +P + + FD Sbjct: 1 MSKTVMLIDGSSLIFRAFFALPKLTNNDGVMTNGVYGFLTMYNNAFDRYKPDYVLVAFDR 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 +++ +RH+ DYK R MP EL + L+ + V G EADD+ T A Sbjct: 61 ASKT--FRHKEFEDYKGTRDKMPSELSYQFGILKDILDSLNVKYTDLDGFEADDIVGTYA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPD 167 +AG+++ +++ D+ Y QL+ + + + + + I +EFG+ P+QL + Sbjct: 119 KMAQEAGYESVLITGDRDYLQLVDEKIVVNLTKKGVSETKEYTVDTIKEEFGLSPKQLIE 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW-RKKLETHKEMAF 226 GL G S +PGV GIGPK A + ++ S+EG+Y+++D V+ K ++ L + +A+ Sbjct: 179 VKGLEGDKSDNIPGVDGIGPKKAIGFIQKYGSIEGLYDHIDEVSGKKTKQTLIDSEAIAY 238 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 + + I + T ++ +L++L++ Sbjct: 239 MSKKIGTIVTSAPVEFDLEELKVK 262 >UniRef50_Q6MEQ2 Probable DNA polymerase I n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEQ2_PARUW Length = 891 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 124/259 (47%), Gaps = 12/259 (4%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L I+DA I R + + + + ++ +LI PTH VAVFD N Sbjct: 2 DKLYILDASGYIYRSYFAIRQMTNARGESTNALFGFIRSVLKLIKDFNPTHLVAVFDGPN 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 S R + P YKA R MP++L ++ + + G+P G EADD ++A Sbjct: 62 NSQK-RTELYPAYKAHRKEMPKDLLYQILWSQRFCQLMGIPELMVPGVEADDTMGSIAKW 120 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR-WLDAPFIDKEFGVQPQQLPDYWGLA 172 A I ++DK CQL+S + I + F+ +DA + ++FGV P Q+ DY + Sbjct: 121 AATLNTTAYICTSDKDMCQLVSNQILILNTFKDNLIIDANGVKEQFGVMPAQMIDYLAII 180 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRK-KLETHKEMAFLCRDI 231 G +S +PG+ G GPK+A LL +F SL+ I E+ V+ K ++ L + KE L + + Sbjct: 181 GDASDNIPGLTGFGPKTAADLLEKFGSLDYILEHPLEVSGKKKQDTLISEKEKVLLSKKL 240 Query: 232 ARLQTDLHIDGNLQQLRLV 250 + T + +L Sbjct: 241 VIVDTTVSFPNQEDFFKLT 259 >UniRef50_Q1II21 DNA polymerase I n=2 Tax=Acidobacteria RepID=Q1II21_ACIBL Length = 929 Score = 273 bits (699), Expect = 4e-72, Method: Composition-based stats. Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 38/280 (13%) Query: 4 HLLIVDALNLIRRIHAV------------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 + ++D + R + + + L++L P H A+ Sbjct: 34 RVFLIDTFGFVFRAYHAMARQRPMSTKTGIPTSATYVFVNMLNKLRQDFAPEHIAAIM-- 91 Query: 52 ENRSSGWRHQR---------------------LPDYKAGRPPMPEELHDEMPALRAAFEQ 90 +R + YKA R MPE+L +MP + A Sbjct: 92 -EGGKTFRDEEAAAVATINKFDIKTQTFQEIAYGGYKANRTEMPEDLTQQMPYIERALNA 150 Query: 91 RGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL- 149 +P S G EADD+ TLA K G+ IVS+DK QL++ + I + + + Sbjct: 151 YRIPMISAEGFEADDVIGTLAKKAADGGYPVYIVSSDKDMMQLVTERVCILNPPKDNLIC 210 Query: 150 DAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDA 209 D +++ GV P+++ D L G S VPG GIG K + QL+ F ++E ++ Sbjct: 211 DPKKVEEILGVPPERVVDVMALRGDSIDNVPGAPGIGDKGSVQLIQRFGTVEAALDHAGE 270 Query: 210 V-AEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 V +++ R+ L+ +++ + + ++TD+ + Q +R Sbjct: 271 VESKRQRESLQQNRDAVLFSKRMVTIRTDIDMPFEPQAMR 310 >UniRef50_Q2SRK9 DNA polymerase I n=4 Tax=Mollicutes RepID=Q2SRK9_MYCCT Length = 911 Score = 273 bits (698), Expect = 6e-72, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 129/263 (49%), Gaps = 24/263 (9%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------------SPCVETCQHALDQLIMHSQP-TH 44 M +L+VD +LI R + V + + L +I P H Sbjct: 1 MKTKILVVDGNSLIFRAFYATAYSPNTSLLKTKSGVLTNAVYSFINMLLSVIHQRGPYDH 60 Query: 45 AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEAD 104 + FD ++ +RH L DYKA R P EL ++ +R + + + EAD Sbjct: 61 ILIAFDKGKKT--FRHDLLSDYKANRIKTPNELVEQFSIVREFLTKANIQWFEQENIEAD 118 Query: 105 DLAATLAVKVTQA--GHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEF 158 D+A ++ + QA I+S+DK QL++ + + Q +D + +++ Sbjct: 119 DIAGSICKYAEKQFDNLQAEILSSDKDMYQLITNKVICLNPVQGVNELEEVDTNKLFEKW 178 Query: 159 GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL 218 + P Q+PDY + G SS + GV GIG K A +L+ ++Q+LE IY NL+ + + KL Sbjct: 179 QILPNQVPDYKAIVGDSSDNLKGVNGIGQKGAIKLIQQYQNLENIYNNLEQIKGAIKTKL 238 Query: 219 ETHKEMAFLCRDIARLQTDLHID 241 E K+MAFLC+D+A ++TD+ ++ Sbjct: 239 EQDKKMAFLCKDLATIKTDVTLE 261 >UniRef50_Q7VRJ4 DNA polymerase I n=3 Tax=Enterobacteriaceae RepID=Q7VRJ4_BLOFL Length = 943 Score = 272 bits (697), Expect = 8e-72, Method: Composition-based stats. Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 20/263 (7%) Query: 4 HLLIVDALNLIRRIHAVQ-------GSPC--VETCQHALDQLIMHSQPTHAVAVFDDENR 54 +++VD + R + G P + + LI QP+H +FD + Sbjct: 10 PIILVDGSFYMYRAYHAYPPLTTQNGQPVWVIYGVISMIKSLITRYQPSHMAVIFDVSGK 69 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + +R YK+ R +P++L ++ + G+ + EADD+ ATLA Sbjct: 70 T--FRDDLFKQYKSNRIKIPDDLSIQIIPTHKIIKAMGISVLNIPNVEADDVIATLATFY 127 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 Q I + DK Q++S + + + L+ ++K+FGV P + DY L G Sbjct: 128 AQLNKTVLISTGDKDMAQIVSSNIILINTMSNIMLNPTEVEKKFGVPPTLIADYLALVGD 187 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEMAFL 227 + +PGV GIG K+A +L + +L +Y+NL+ + +K + L +KE+AFL Sbjct: 188 RADNIPGVPGIGKKTAQIVLNQIGNLNILYQNLNNILQLNIRGRKKIYQALLINKELAFL 247 Query: 228 CRDIARLQTDLHIDGNLQQLRLV 250 C +A ++ D+ + + +L+ Sbjct: 248 CYKLATIKIDVPLQES--DYKLL 268 >UniRef50_UPI0001BC5C75 DNA polymerase I n=3 Tax=Fusobacterium RepID=UPI0001BC5C75 Length = 894 Score = 272 bits (697), Expect = 8e-72, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 132/263 (50%), Gaps = 15/263 (5%) Query: 3 VHLLIVDALNLIRRIHAVQ--------GSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 L++D ++ R + + V +L QL+ + + A FD + R Sbjct: 2 KRALLLDVSAMMYRAYYANMNMRTKEMPTGAVYGFLLSLFQLLKEYESEYMAAAFDIK-R 60 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 S R + +YK+ R PE+L ++P + A + G+ G EADD+ +L+ K+ Sbjct: 61 SHLKRTELYAEYKSNRDTTPEDLVKQIPYIEAILDAFGIQRIKIDGYEADDILGSLSTKL 120 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 ++ G TIV+ DK QLL I ++ + V P+++PD +GL G Sbjct: 121 SKKGIPVTIVTGDKDISQLLDENTEIYLLGKEVLKTREDVKNYIDVYPEKIPDLFGLIGD 180 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA------EKWRKKLETHKEMAFLC 228 SS +PGV IGPK A +L ++ +LEGIYEN+D ++ + + ++ KE+AFL Sbjct: 181 SSDCIPGVRKIGPKKAVPMLEKYGNLEGIYENIDKLSELPGVGKTLIQIMKEDKELAFLS 240 Query: 229 RDIARLQTDLHIDGNLQQLRLVR 251 R +A+++ +L +L++L+ + Sbjct: 241 RSLAKIERNLDFPFSLEELQFEK 263 >UniRef50_Q30VQ3 DNA polymerase I n=7 Tax=Desulfovibrionales RepID=Q30VQ3_DESDG Length = 931 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 74/257 (28%), Positives = 114/257 (44%), Gaps = 14/257 (5%) Query: 2 AVHLLIVDALNLIRR-IHAVQG--------SPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 + ++D I R +A Q + + L +L+ QP + A F + Sbjct: 77 KEPVYLIDGSAFIFRGFYAFQNMQRSDGLPTNALFIVLRILLKLLREEQPAY--AAFFMD 134 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH YKA R PE L ++ +R G+P + G EADD A+LA Sbjct: 135 GKGPTFRHALYDQYKANRSATPEPLVQQLDPIRRGVRSLGIPLEVSDGCEADDCIASLAA 194 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK--RWLDAPFIDKEFGVQPQQLPDYWG 170 K ++ IV DK Q + + + D K + LD +E G+ P Q PD+ Sbjct: 195 KF-KSERPVIIVGADKDLKQCIDDNVYLWDPGAKQEKLLDLAGFTEETGLSPSQWPDFQA 253 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 + G SS +PGV G+GPK+A Q+ EF +LE I EN A+ +KK + +L R Sbjct: 254 VIGDSSDNIPGVPGVGPKTAAQIFAEFPTLEAIQENEKALKPGVQKKFAGQWDNIYLYRR 313 Query: 231 IARLQTDLHIDGNLQQL 247 + L T L+ + Sbjct: 314 LTTLDTGRCTSLALKDM 330 >UniRef50_A6VZB4 5'-3' exonuclease n=2 Tax=Marinomonas RepID=A6VZB4_MARMS Length = 263 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 103/261 (39%), Positives = 150/261 (57%), Gaps = 12/261 (4%) Query: 1 MAVHLLIVDALNLIRRIHAV-----QGSPCVETCQH----ALDQLIMHSQPTHAVAVFDD 51 M LLI+D LNLIRR++A + +E Q AL +L P++AV VFD Sbjct: 1 MDKKLLIIDGLNLIRRLYAALESEQDSTRRIERTQSIAIEALAKLTHQFTPSYAVVVFDS 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ WRH+ P+YK GR PM + L + +P F +PC G EADDL ATLA Sbjct: 61 NGKT--WRHRVYPEYKLGRVPMDDTLLESLPDFAKVFRFNHLPCLRIDGWEADDLIATLA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLL-SPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 VK + ++ IVSTDKG+ QLL + + DYF K D ++ ++GV+P+QL DYW Sbjct: 119 VKAANSNVKSYIVSTDKGFTQLLGNDRILQYDYFAKLGYDKIWVPGKYGVEPEQLTDYWA 178 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G +++++PGV GIGPK+A ++ F ++E IY NL + +E+ + L E L R Sbjct: 179 LVGDTTNRIPGVKGIGPKTALSIISLFPTVEEIYANLPSFSERIQSMLAGGYEQCLLSRS 238 Query: 231 IARLQTDLHIDGNLQQLRLVR 251 + L+TD+ I L QLR ++ Sbjct: 239 LVALKTDVEIGVRLSQLRYIK 259 >UniRef50_Q30R59 DNA polymerase A n=6 Tax=Epsilonproteobacteria RepID=Q30R59_SULDN Length = 902 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 122/261 (46%), Gaps = 14/261 (5%) Query: 1 MAVHLLIVDALNLIRR--------IHAVQGSPC--VETCQHALDQLIMHSQPTHAVAVFD 50 M+ + I+D R + QG P + + + L + V D Sbjct: 1 MSKTVTIIDTFGFFFRSFYALPQHLKNSQGFPTGLLTGFTNFISTLQKQHDSDYIVFAID 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +R + P+YKA R P P+EL ++P ++ G G EADD+ AT+ Sbjct: 61 --TKGDSFRKEIDPNYKANRQPPPQELSMQLPIAIEWIDKMGYKTLGFDGYEADDVIATV 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPT-LRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 + + +VS DK QL+ + + D +K+ +D K++G+ P+Q DY Sbjct: 119 VRFAKEKSYNVRVVSHDKDLFQLIDDGRVVLVDAIKKQVMDEDECFKKYGISPKQFIDYQ 178 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLC 228 + G S+ +PGV GIG A +LL+E+++L+ IY N++ + +KKL KE A++ Sbjct: 179 SILGDSADNIPGVKGIGKVGAEKLLIEYETLDNIYANIENIKPLGIQKKLLEFKEQAYMS 238 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 + + L + + ++ ++ Sbjct: 239 KKLVTLSCSVFESFDFEEFKM 259 >UniRef50_P52027 DNA polymerase I n=4 Tax=Deinococci RepID=DPO1_DEIRA Length = 956 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 16/260 (6%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L+++D L R + + + + L + + + + VFD Sbjct: 46 PDTLVLIDGHALAFRSYFALPPLNNSKGEMTHAIVGFMKLLLR-LARQKSNQVIVVFDPP 104 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +RH++ YK+GR PE+L ++ +RA + G P G EADD+ A+L Sbjct: 105 VKT--FRHEQYEGYKSGRAQTPEDLPGQINRIRALVDALGFPRLEEPGYEADDVIASLTR 162 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 G++ IV++D+ QLL +++ + +++++GV +Q DY L Sbjct: 163 MAEGKGYEVRIVTSDRDAYQLLDEHVKVI-ANDFSLIGPAQVEEKYGVTVRQWVDYRALT 221 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK---WRKKLETHKEMAFLCR 229 G +S +PG GIGPK+A +LL E+ +LE +YE A K RKKL +E Sbjct: 222 GDASDNIPGAKGIGPKTAAKLLQEYGTLEKVYEAAHAGTLKPDGTRKKLLDSEENVKFSH 281 Query: 230 DIARLQTDLHIDGNLQQLRL 249 D++ + TDL +D RL Sbjct: 282 DLSCMVTDLPLDIEFGVRRL 301 >UniRef50_Q04Q27 DNA-directed DNA polymerase n=4 Tax=Leptospira RepID=Q04Q27_LEPBJ Length = 921 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 20/264 (7%) Query: 3 VHLLIVDALNLIRRIHAVQGSP------------CVETCQHALDQLIMHSQPTHAVAVFD 50 LLI+D + R + G+ L +L+ PTH FD Sbjct: 2 KRLLIIDGHAFVFRAYYAFGASNLTNSKTGKPSGATFGFFKMLFKLLQDYTPTHVAMTFD 61 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 R + DYKA R PMPE+L ++ + E+ G G+EADD+ TL Sbjct: 62 PGGPLE--RGKTFEDYKANRKPMPEDLRPQIKEVMETLEKIGFKVLKMEGHEADDIIGTL 119 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLS-PTLRIRDYFQK----RWLDAPFIDKEFGVQPQQL 165 + I S DK QLL +++ + +D+ ++ +E G+ +Q+ Sbjct: 120 CETYRTIAKEILIFSGDKDLYQLLEKKNIKMLRGKKGVTEFVEIDSAWVKEELGIDVKQI 179 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEM 224 PDY G+ G +S +PGV GIG K A++LL E+++L+GIY+NL+ + + KL KE Sbjct: 180 PDYMGIVGDTSDNIPGVKGIGDKGASKLLQEYKTLDGIYKNLNKIKNPSIQTKLSEQKEN 239 Query: 225 AFLCRDIARLQTDLHIDGNLQQLR 248 A+L + +A ++ DL + + + Sbjct: 240 AYLSKQLATIRRDLKLGITEKDIE 263 >UniRef50_Q83GI7 DNA polymerase I n=2 Tax=Tropheryma whipplei RepID=Q83GI7_TROWT Length = 356 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 21/265 (7%) Query: 2 AVHLLIVDALNLIRRIHAVQGS-----------PCVETCQHALDQLIMHSQPTHAVAVFD 50 + L++VD +L R + G+ + + L QL+ +H FD Sbjct: 8 SKRLILVDGHSLAFR--SFYGTKAIAVVNGVQVNALYGFVNRLTQLLESGPVSHFAVAFD 65 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 +S +R + P+YK R +PEE ++ ++ GV ++ EADD+ ATL Sbjct: 66 VSRKS--FRTEAYPEYKGTRKKVPEEFFPQVDLIKEFLHLIGVNHFAVQNYEADDIIATL 123 Query: 111 AVKVTQAGH-QATIVSTDKGYCQLLSPTLRIRDYFQKR-----WLDAPFIDKEFGVQPQQ 164 + + G I+S D+ QL++ + + + K + +G++P Sbjct: 124 SRLALEEGFSDVRILSGDRDLIQLVNNKVSLLFFSAKHRLGFAVYTPEAVMDRYGIEPHV 183 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 PD L G SS +PG+ IG K+AT LL ++ L+ I E+ ++ + + + Sbjct: 184 YPDMAALVGESSDNLPGIKKIGEKTATTLLQKYGCLQKIIESRWEISGVVGQNIRNDYHV 243 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 A R + L DL + ++ L L Sbjct: 244 ALRNRKLNTLVNDLPLPASVSDLSL 268 >UniRef50_C1A3H5 DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3H5_GEMAT Length = 984 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 120/269 (44%), Gaps = 26/269 (9%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPC--VETCQHALDQLIMHSQPTHAVAVFD 50 A L ++D LI R +G L +L+ QP V D Sbjct: 9 APRLFLIDGYALIYRAFFALLQRPLSTSRGENTSIAWGIASFLKRLLNTHQPELLAWVHD 68 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMP----ALRAAFEQRGVPCWSTSGNEADDL 106 + +R + PDYKA R + ++L + + +P S G EADD+ Sbjct: 69 S---GATFRDELYPDYKATREKLTDDLQADFDQGLQRVLQLLAAYDIPVLSAPGFEADDV 125 Query: 107 AATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQ-------KRWLDAPFIDKEFG 159 T+A + +AG+ +VS DK + QL+ P + + + + + W+ G Sbjct: 126 IGTMAARGVEAGYNVVVVSGDKDFQQLVRPGVWLLNPGRGGPASVDESWVGVENGSDRLG 185 Query: 160 VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW-RKKL 218 V P+++ DY + G +S VPGV GIG K A +L+ ++ LE I N++ + +K R+ L Sbjct: 186 VPPERVIDYLAIVGDTSDNVPGVKGIGEKGAIELITQYGPLENILANVENITKKRPREAL 245 Query: 219 ETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 + + + A L + + + D+ + ++L Sbjct: 246 QQYADSARLSKQLVTIHCDVPVPFESEKL 274 >UniRef50_B2IJU1 DNA polymerase I n=25 Tax=cellular organisms RepID=B2IJU1_BEII9 Length = 1043 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 119/278 (42%), Gaps = 33/278 (11%) Query: 3 VHLLIVDALNLIRRIHAVQ--------------GSPCVETCQHALDQLIMH----SQPTH 44 + +VD + + R + + V L Q I +PTH Sbjct: 33 DRVFLVDGSSFVFRAYFQSIRQDAKYNYRSDRLPTGAVRLFCTKLFQFIREGAADLKPTH 92 Query: 45 AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEAD 104 +FD + +R + P YK+ R PE+L + P +RA+ G+ EAD Sbjct: 93 LAIIFDKSE--NSFRKEIYPPYKSNRSEPPEDLIPQFPLMRASVRAFGLQPVEQDRYEAD 150 Query: 105 DLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYF----------QKRWLDAPFI 154 DL AT A + G + I+S DK QL+ P + + D Q+R + + Sbjct: 151 DLIATYATQAHALGAEVLIISADKDLMQLIGPGVSMYDPASGEAGAKGARQERRIGQEEV 210 Query: 155 DKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW 214 FGV P ++ D LAG S+ VPG GIG K+A QL+ ++ L+ + + + + Sbjct: 211 VAYFGVGPDKVIDVQALAGDSTDNVPGARGIGIKTAAQLINDYGDLDNLLKLAREIKQPK 270 Query: 215 RKKLETHKE---MAFLCRDIARLQTDLHIDGNLQQLRL 249 R+++ T E + + R + L D+ ++ L L L Sbjct: 271 RREILTEPESVGLIEISRKLVTLVRDVPVEIPLADLGL 308 >UniRef50_D2NTK8 DNA polymerase I n=2 Tax=Rothia mucilaginosa RepID=D2NTK8_9MICC Length = 1003 Score = 269 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 26/272 (9%) Query: 3 VHLLIVDALNLIRR----IHAV--------------QGSPCVETCQHALDQLIMHSQPTH 44 LL++D +L R I+ + Q + V L +I +QP+H Sbjct: 6 KTLLLIDGHSLALRSFFGIYTMAEKTGQHIFVRSDGQHTEAVHAFLSTLLSIIKDNQPSH 65 Query: 45 AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEAD 104 FD + +R +YK GR +PE + ++ ++ +P + EAD Sbjct: 66 IAVAFDLPGGT--FRTAEYGEYKGGRNAIPEAFNGQIDLIKKMLGALNIPALTYENYEAD 123 Query: 105 DLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------RWLDAPFIDKEF 158 D+ ATL + T+AG++ I+S D+ QL++ + + + +D ++K+ Sbjct: 124 DIVATLTRRGTEAGYKVLILSGDRDIFQLVTDDVTLLYPVTTGPSKGIQRMDPAAVEKKT 183 Query: 159 GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL 218 V P PD L G + +PGV G+GP A + L E+ SL+G+ +N D + K + L Sbjct: 184 KVPPHMYPDLAALTGEQADNLPGVPGVGPGFAAKWLGEYGSLQGVLDNRDKIGGKKGEAL 243 Query: 219 ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 + + R + +L DL ++ L+ Sbjct: 244 RENVDNVVRNRRLNQLVNDLDLNVTLEDTAFT 275 >UniRef50_C7LZ56 DNA polymerase I n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ56_ACIFD Length = 886 Score = 269 bits (689), Expect = 6e-71, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 119/250 (47%), Gaps = 11/250 (4%) Query: 9 DALNLIR----RIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLP 64 A +R R + + + L ++ ++PTH D E + +R L Sbjct: 26 RAFYALREPMMRTESGVATNALFGFASMLANVVAQTRPTHLAVALDAEGPT--FRDAILE 83 Query: 65 DYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIV 124 YK R P P++L ++ A R E GVP SG EADD+ ATLA + AG IV Sbjct: 84 SYKGTRAPTPDDLRQQLDAARGLLEAIGVPAVEASGFEADDVIATLATRARDAGIATRIV 143 Query: 125 STDKGYCQLLSPTLRI-----RDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKV 179 + D+ QL+ L + + D + + +GV P + D L G SS + Sbjct: 144 TGDRDLLQLVEDPLIVVLLTRKGVSNLEAFDEAKVLETYGVPPARYGDLASLRGDSSDNL 203 Query: 180 PGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLH 239 PGV GIGPK+A LL F+S+EGI +LDA++ + R+ LE + R + +L+ D+ Sbjct: 204 PGVPGIGPKTAAALLDRFESIEGILAHLDALSARQREALEQARSQLLEARLLTQLRRDVA 263 Query: 240 IDGNLQQLRL 249 +L LRL Sbjct: 264 ELPSLDALRL 273 >UniRef50_Q47YA8 Uncharacterized exonuclease xni n=1 Tax=Colwellia psychrerythraea 34H RepID=XNI_COLP3 Length = 290 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 105/273 (38%), Positives = 160/273 (58%), Gaps = 26/273 (9%) Query: 1 MAVHLLIVDALNLIRRIHAVQGSPCV-----------------------ETCQHALDQLI 37 M+ HL+++DALNLIRR++AVQ P + TC +AL ++I Sbjct: 1 MSAHLILIDALNLIRRVYAVQERPFIQIKQDHDDELSASTLKQVLFNTQNTCVNALIKII 60 Query: 38 MHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWS 97 QPTHA+ VFD ++ WR+Q YK GR MP+ L +++ ++ AF ++GV + Sbjct: 61 DQHQPTHALTVFD--SQEPCWRYQLFEGYKKGRKKMPDHLANKLIDIQDAFMEQGVDSLT 118 Query: 98 TSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKE 157 + +EADDL ATLAVK+ G + TI+STDKG+ LLSP + I DYF +R+LD + + Sbjct: 119 SDEDEADDLIATLAVKMALHGQKVTIISTDKGFLPLLSPNIHIYDYFNRRYLDEEHVQSK 178 Query: 158 FGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKK 217 F V+ QL D+W L G +++K+ GV+GIG +A +LL ++ SL+ I E D + + +K Sbjct: 179 FSVKTSQLIDFWTLTGDNTNKIEGVSGIGQVTAAKLLNQYGSLKAILEATD-LKDSLAEK 237 Query: 218 LETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 L E L R + L+ D+ + NL+ +RL Sbjct: 238 LTQSLEQMDLARKLLTLKQDIPLGFNLKDIRLT 270 >UniRef50_C3U0N4 DNA polymerase I n=1 Tax=uncultured bacterium RepID=C3U0N4_9BACT Length = 803 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 28/266 (10%) Query: 2 AVHLLIVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDE 52 L+++D+ ++ R + G P + L ++I +P + A FD Sbjct: 16 KKTLVLLDSHAILHRAYHALPDFASPSGEPTGALYGVVAMLLKIIEDFKPDYIAACFDLP 75 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH+ YK R + L ++ R F G+P + G EADD+ T+A Sbjct: 76 EPT--YRHEAFAAYKGTRSKTDDALVQQIIRSRDIFAAFGIPIYEHPGFEADDMLGTIAY 133 Query: 113 KVTQAGH-QATIVSTDKGYCQLLSPTLRIRDYFQKRWL------DAPFIDKEFGVQPQQL 165 + I S D Q + R++ Y K+ + D + + FG P+ + Sbjct: 134 QTRDDKDLTVIIASGDMDTMQCV-EKKRVQVYTLKKGIKDTILYDEEAVKERFGFGPKLV 192 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDA---------VAEKWRK 216 PDY GL G +S +PG+ GIG K+AT L+ +F S++ IY+ L + + Sbjct: 193 PDYKGLRGDTSDNIPGIVGIGEKTATDLITQFGSIDDIYKKLKKDEAPFLAAGIKPRIIG 252 Query: 217 KLETHKEMAFLCRDIARLQTDLHIDG 242 L+ +E A + +A ++TD I Sbjct: 253 LLKAGEEEAQFSKMLATIRTDAPITF 278 >UniRef50_A8FKC7 DNA polymerase I n=20 Tax=Campylobacter RepID=A8FKC7_CAMJ8 Length = 879 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 77/254 (30%), Positives = 115/254 (45%), Gaps = 13/254 (5%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L I+D R++ Q S + + + L + + V D + Sbjct: 2 KTLTIIDTFGFFFRLYYALKGFKNSQGQASGMISGFANFIYSLKNEHKSDYIVFALDSKG 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R + P+YK R P P EL +++P E+ G S G EADD+ A+ Sbjct: 62 KT--FRSEIDPNYKQNRTPPPPELLEQIPICIEMIEKMGFISVSQEGYEADDIIASFVRT 119 Query: 114 VTQAGHQATIVSTDKGYCQLL-SPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 I++ DK QL+ I K D +++GV+P Q+ D+ L Sbjct: 120 CEDRDIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEAACLEKYGVKPHQIRDFLALC 179 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDI 231 G SS +PGV GIG K A LL EF S+EGIYENL V E+ R L KE AFL + + Sbjct: 180 GDSSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLVRNERSRNLLLEGKENAFLSKKL 239 Query: 232 ARLQTDLHIDGNLQ 245 A L +L + ++ Sbjct: 240 ASLYENLEVQDLIE 253 >UniRef50_D1B5M0 DNA polymerase I n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5M0_THEAS Length = 836 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 79/245 (32%), Positives = 118/245 (48%), Gaps = 16/245 (6%) Query: 1 MAVHLLIVDALNLIRR-------IHAVQGSP--CVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ L+VD L R + A G+P V + L +++ +PT FD Sbjct: 1 MSDRFLLVDGHGLAFRAFYALPALSAPDGTPVNAVLGFLNMLYKVLEDQRPTGWAIFFDP 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 R + L YKAGR P P+E ++P + E G P G EADD+ A A Sbjct: 61 PG--PVIRREVLESYKAGRRPTPQEFKVQLPIIIDLLEALGHPVHVREGQEADDVIAATA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 V ++ +G + I+S DK Q++SP++++ + R D +E+ P + D Sbjct: 119 VNLSGSG-EVVILSADKDLLQVISPSVKVCRPVKGVSEFRVYDQEAFLEEYRFPPALMAD 177 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 Y L G S +PGV GIG K A +L+ LE IYE LD ++ RK+LE +E+AFL Sbjct: 178 YLALTGDSVDNIPGVPGIGDKGARELVSSLGPLESIYEALDRLSPAKRKRLEEGRELAFL 237 Query: 228 CRDIA 232 R + Sbjct: 238 SRQLV 242 >UniRef50_A2SN70 DNA polymerase I n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SN70_METPP Length = 265 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 84/254 (33%), Positives = 128/254 (50%), Gaps = 10/254 (3%) Query: 4 HLLIVDALNLIRRIH-AVQGSP-------CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 LL++D +++RR++ AV G + H++ + + PTH +A FDD + Sbjct: 6 KLLLLDGTSVVRRVYEAVPGDDGPARVDGAITASMHSIKRALGEHLPTHFLAAFDDGGPT 65 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 WRHQ LP YK+ R PM E L +P L E G S G EADD+ T+A + Sbjct: 66 --WRHQLLPTYKSTRKPMYEGLRAALPRLYRDMESLGFSWVSPPGVEADDVIGTIAHRAA 123 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 G + IVS D C LLS +R+ ++F + W D ++ + G+ P Q+ Y GL G Sbjct: 124 ARGFEVVIVSNDVDMCALLSANVRVYNHFAREWRDETWLASQIGITPAQVSAYIGLVGEE 183 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQ 235 VPGVAG+GPK+A +LL + L+G+ + K ++L E L + + L+ Sbjct: 184 KKSVPGVAGVGPKTAAKLLAQHGDLDGVLAAAAEMPGKIGERLRAGAEACRLSQALGTLK 243 Query: 236 TDLHIDGNLQQLRL 249 D+ + QL L Sbjct: 244 LDVDLSIRPSQLAL 257 >UniRef50_C8PHS8 DNA polymerase I n=2 Tax=Campylobacter RepID=C8PHS8_9PROT Length = 938 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 14/257 (5%) Query: 3 VHLLIVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + I+D R++ G P V + L + + + D + Sbjct: 2 QTITIIDTFGFFFRLYYAMSGLKTKDGKPSGMVSGFASFIANLSKEFKSDYIIFALDSKG 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R P+YK R P L ++P E+ G+ G EADDL A++ K Sbjct: 62 KT--FRSDIDPNYKTNRQAPPPALLQQLPVCIEMIEKMGLYSLGREGYEADDLIASVVKK 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 H+ IV++DK QL+ ++I + +K + +GV P+Q+ D+ + G Sbjct: 120 YGAT-HKINIVTSDKDLYQLIGENVKIYSHGKKMLYGREECLQRYGVYPEQIVDFLAICG 178 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIA 232 S+ +PGV GIG K A +LL E+ SL+ IY NLD + + K R+ L K+ A++ + +A Sbjct: 179 DSADNIPGVRGIGDKGAKKLLDEWGSLDEIYSNLDRLPQNKQREYLIEGKQSAYISKRLA 238 Query: 233 RLQTDLHIDGNLQQLRL 249 L +L I L+ + Sbjct: 239 TLYDELEIP-PLEDAKF 254 >UniRef50_A7ILD7 5'-3' exonuclease n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7ILD7_XANP2 Length = 299 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 114/264 (43%), Gaps = 22/264 (8%) Query: 2 AVHLLIVDALNLIRRIHAVQGSPCV------------ETCQHALDQLIMHSQP----THA 45 H+L++D + + R A G+P V + L+ + +H Sbjct: 9 DDHVLLIDGSSFLWR--AFYGAPAVIRRSDGHPVGAISGFCWMMWTLLHETSAVPPASHR 66 Query: 46 VAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADD 105 +FD R WRH L YKA R P+++ + +RAA +P +G EADD Sbjct: 67 AVIFDAGRR--NWRHDILASYKANRNEPPDDIKRQFKPVRAACAALPIPSVELAGYEADD 124 Query: 106 LAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI--RDYFQKRWLDAPFIDKEFGVQPQ 163 L AT K +G TI + DK QL+ + D + R + + + FGV P Sbjct: 125 LIATYTRKAVASGAGVTIATGDKDLAQLVDDRTGVCLYDASKGRTMREAEVLERFGVPPA 184 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 + D LAG ++ +PGV GIG K A +L+ SLE I A EK K+ H Sbjct: 185 GVLDLLALAGDTTDNIPGVPGIGAKRAAELVSRHGSLEDIIAAGTARKEKQAAKVADHAA 244 Query: 224 MAFLCRDIARLQTDLHIDGNLQQL 247 A + R +A L T + + L L Sbjct: 245 SARISRSLATLDTAVPVPLALAHL 268 >UniRef50_A5CXW1 DNA polymerase I n=2 Tax=sulfur-oxidizing symbionts RepID=A5CXW1_VESOH Length = 909 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 14/255 (5%) Query: 1 MAVHLLIVDALNLIRRIHAVQ---------GSP--CVETCQHALDQLIMHSQPTHAVAVF 49 M L+++D + R + G P + +A+ L Q + +F Sbjct: 1 MPHKLILMDGSAFLFRAYFSTLKQNLTNQNGFPTGAMFGVINAMKSLQRKYQEARIIIIF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D R +RH P YKA R P+ L ++ L + G+ S EADD+ AT Sbjct: 61 DA--RGKNFRHNIYPQYKANRKPIDGGLVVQIEPLYEMIQAMGIHFICVSKVEADDVIAT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 L+ Q + I S DK QL+ + + + D + ++ GV P+++ D+ Sbjct: 119 LSCCANQNNIKTIIASGDKDLMQLVGTNISQLN-MKGVLHDRQSVIEKIGVAPEKILDFL 177 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G S+ +PGV +GPK+A + L + + GI EN + K +KL + ++ L Sbjct: 178 ALTGDSADNIPGVPSVGPKTAIKWLQIYSDILGIKENAMQIKGKVGEKLRDNFDLLDLSY 237 Query: 230 DIARLQTDLHIDGNL 244 + +L+ D+ + N+ Sbjct: 238 QLVKLKFDVVLPCNI 252 >UniRef50_UPI0000DAED41 hypothetical protein Wendoof_01000149 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAED41 Length = 529 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 125/261 (47%), Gaps = 16/261 (6%) Query: 1 MAVHLL-IVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFD 50 M I+D + R + V G P V + + + I HS + D Sbjct: 1 MKEKTFTIIDGYGFLFRAYYVLPHLITTTGMPIGGVYGFLNMVLKYIAHS--DYLTIALD 58 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +RH P+YKA R PE+L + LR A E + G EADD+ ATL Sbjct: 59 AGKK--NFRHNLYPEYKANRVTPPEDLTPQFTILREAVEAFNLSYEEIEGYEADDIIATL 116 Query: 111 AVK-VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 A K + +VS+DK QLL+ + I D + ++D + ++FGV +L D + Sbjct: 117 AAKYANHQDFKVVVVSSDKDLFQLLNHNILIFDPIKNIYIDEKQVIEKFGVNSHKLLDLF 176 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLC 228 L G +S +PGV GIGPK+A +LL EF SL I EN+D + + + R L HKE A + Sbjct: 177 SLTGDASDNIPGVPGIGPKTAAKLLDEFDSLNNIIENIDNIEQTRIRNILAEHKEKALIS 236 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 R++ L + + ++ + + Sbjct: 237 RELLSLCEKVDLQHDIAKCEV 257 >UniRef50_P54161 5'-3' exonuclease n=31 Tax=Bacillales RepID=EX53_BACSU Length = 296 Score = 266 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 66/264 (25%), Positives = 112/264 (42%), Gaps = 20/264 (7%) Query: 4 HLLIVDALNLIRRIHAVQG-------------SPCVETCQHALDQLIMHSQPTHAVAVFD 50 LL+VD + L+ R + V L + QPTH V +D Sbjct: 5 KLLLVDGMALLFRAFFATAVHRNFMINDSGVPTNGVNGFLKHLITAVETFQPTHVVCCWD 64 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 +++ +R+ DYKA R P EL + + A + G+ +G EADD TL Sbjct: 65 MGSKT--YRNDLFQDYKANRSAPPVELIPQFDLAKEAAAELGIMNIGFAGYEADDCIGTL 122 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLP 166 A T+V+ D+ QLL+ + + + + +E GV P+ L Sbjct: 123 ADLFANE-ADITVVTGDRDLLQLLTDKVSVALLQKGIGNYKVYTKETFYEETGVMPKALI 181 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D L G SS PGV GIG K+A +L+ E+++++ + ENL + + + K++ Sbjct: 182 DIKALMGDSSDNYPGVKGIGEKTAYKLIREYETIDRLLENLSLLPKGQQGKIQQGLSDLE 241 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 + R +A + + + L+ Sbjct: 242 MSRKLAEIHCSVPLACTLKDALFT 265 >UniRef50_O51498 DNA polymerase I n=20 Tax=Borrelia RepID=DPO1_BORBU Length = 908 Score = 266 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 130/261 (49%), Gaps = 16/261 (6%) Query: 3 VHLLIVDALNLIRR-IHAVQGSPCVE----------TCQHALDQLIMHSQPTHAVAVFDD 51 L ++DALN+I R H ++ P + L +I P H + FD Sbjct: 2 KELYLIDALNIIFRNYHVMKNYPLLNTQGENVNAFIGFFKTLFFIIKEKNPEHLIITFDS 61 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 E + +R Q+ P YKA R P++L ++ ++ + +P + G EADDL A+ A Sbjct: 62 EVPT--FRKQKYPSYKATRDLPPDDLIPQIGWIKEGLLKAKIPIFEMEGYEADDLLASFA 119 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL--DAPFIDKEFGVQPQQLPDYW 169 K + + I+S DK Q +S ++I ++ D ++ K+FGV Q+ DY Sbjct: 120 KKAAKNNYLTYIISPDKDLLQTMSEYVKILKIENNSFIEMDNEYVTKKFGVNSFQIKDYL 179 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 + G S +PG+ GIG K A LL EF++L+GIY NL+ + +K R+ L KE AFL Sbjct: 180 AIVGDRSDNIPGIKGIGAKGAANLLREFKTLDGIYSNLEIINKKHRELLIKEKENAFLSY 239 Query: 230 DIARLQTDLHIDGNLQQLRLV 250 ++ L+ +L I ++ L Sbjct: 240 ELVSLEENLKIP-EIENFALK 259 >UniRef50_A5IXV4 DNA polymerase I: 5' 3' exonuclease domain n=7 Tax=Mycoplasma RepID=A5IXV4_MYCAP Length = 305 Score = 266 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 85/269 (31%), Positives = 128/269 (47%), Gaps = 27/269 (10%) Query: 5 LLIVDALNLIRR-IHAVQG---------------SPCVETCQHALDQLIMHSQPTHAVAV 48 +L+VD LI + +A + V L +LI PTH Sbjct: 8 MLLVDGNFLIFQSFYASYNKYNPNSVLVAKDGTTTNGVHVFFQTLFKLIKFYNPTHLFIA 67 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + ++ RH+ DYKAGR PE + ++ + + + G EADDL A Sbjct: 68 FDAKGKTK--RHEEYDDYKAGREKAPEIIFEQFDLAKKILSAMNIKWFEKVGYEADDLIA 125 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK-------RWLDAPFIDKEFGVQ 161 T+A +Q + I S DK QL++ I +K + +G+ Sbjct: 126 TIAKHNSQFNN--YIYSKDKDLLQLVNQNNSIIKVVKKVGNFTEYKLETVNEFADIYGIN 183 Query: 162 PQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETH 221 P Q+PDY GLAG SS K+ GVAGIGPK A LL EF +LE IYEN++ + K ++ LE Sbjct: 184 PNQIPDYKGLAGDSSDKLKGVAGIGPKKAISLLNEFGTLEAIYENINKITGKTKEYLEND 243 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 E A C+ +A L + + +D N++ +++ Sbjct: 244 CESAHFCKRLAILNSYVEMDTNIEDYKIM 272 >UniRef50_B6WQX5 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQX5_9DELT Length = 919 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 75/259 (28%), Positives = 112/259 (43%), Gaps = 14/259 (5%) Query: 2 AVHLLIVDALNLIRRIHAV-------QGSPCVETCQ--HALDQLIMHSQPTHAVAVFDDE 52 A + ++D I R G P L +++ +P + V D Sbjct: 11 AEPVFLMDGSAFIYRGFFANRNMQRSDGFPTNSLVVVSRVLLRILREERPRYFAFVQD-- 68 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH+ P YKA R PE+L ++ ++ G+ + G EADD A+LA Sbjct: 69 GKGPNFRHEIFPLYKANRDATPEDLVRQLDPIQRMVRALGLRLEVSQGCEADDCIASLAA 128 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK--RWLDAPFIDKEFGVQPQQLPDYWG 170 + H IVS DK Q L P + + D K + + E GV P Q PD Sbjct: 129 RFAGE-HPVIIVSGDKDLKQCLGPNVYMWDPASKEEKLVSEADFTAESGVTPGQWPDVQA 187 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G +S +PGV GIGPK+A Q+ SLE I ++ + K + KL+ H E F+ R Sbjct: 188 LIGDTSDNIPGVPGIGPKTARQIFSICPSLEDIRDHFVLLPPKLQAKLQEHLENMFIWRQ 247 Query: 231 IARLQTDLHIDGNLQQLRL 249 + L + L LR+ Sbjct: 248 LTTLSREACPGVTLDDLRV 266 >UniRef50_Q2NK60 DNA polymerase I n=5 Tax=Candidatus Phytoplasma RepID=Q2NK60_AYWBP Length = 847 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 119/259 (45%), Gaps = 21/259 (8%) Query: 3 VHLLIVDALNLIRRIHAVQG--------------SPCVETCQHALDQLIMHSQPTHAVAV 48 HL++VD +L+ R + + + + ++++ ++ + + Sbjct: 2 KHLVLVDGNSLLFRAYHATASKYKPLLQNKKGIYTNALLSFIRMFEKILEETK-GYILVA 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + RHQ YK GRP P L ++P ++ E GV + EADD+ Sbjct: 61 FDTPKTTK--RHQLYDAYKQGRPETPSALISQIPLIKQYLELIGVKYHAQDEYEADDIIG 118 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQ 164 TLA + + + +I S+D QL+ + + + + ++ + +E+G++ Q Sbjct: 119 TLAKEASNQNNTVSIYSSDCDLLQLVDKKITVCLLKKGLREIKYYTPTTLLEEYGLKEYQ 178 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + DY L G S + GV GIGPK+A +LL E+ +L+ + +NLD + + K++ + Sbjct: 179 MIDYKSLIGDPSDNIKGVLGIGPKTAQKLLQEYDTLDNLMQNLDNIKPILKTKIQNSQTD 238 Query: 225 AFLCRDIARLQTDLHIDGN 243 L + + + + + + Sbjct: 239 LELSKILTAINLKVPLPFD 257 >UniRef50_B3PMZ8 5'-3' exonuclease, exo domain of DNA polymerase I n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PMZ8_MYCA5 Length = 293 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 20/257 (7%) Query: 1 MAVHLLIVDALNLIRRIHAVQG-------------SPCVETCQHALDQLIMHSQPTHAVA 47 M +L++D L R + + V + L LI + TH Sbjct: 1 MKNKILVIDGTYLAYRSYFATTYKGVVMANQEGTLTNAVFGFFNTLLTLIKMQKVTHVFV 60 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 FD + ++ +RH+ YKA R P + + ++ ++ + + + G EADD+ Sbjct: 61 AFDSKIKT--FRHELFSGYKATRQKAPSDFYVQLNFIQQLLDALNITNFYKDGFEADDII 118 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL---DAPFIDKEFGVQPQQ 164 A + ++ + I S D+ QL++P + I K +A + + P Q Sbjct: 119 AKVVSIFSE--DEILIHSADQDLNQLINPNVAIIKKNNKGVYFELNANNFGEYYDFLPSQ 176 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + DY L G SS GV GIGPKSA LL E+ +LE I+ N++++ + K+E +KE Sbjct: 177 VIDYKALVGDSSDNFKGVPGIGPKSAAGLLHEYGTLENIFANIESIKPALKAKIEANKEE 236 Query: 225 AFLCRDIARLQTDLHID 241 A + +A L+TD I Sbjct: 237 ALRDKYLATLRTDFEIP 253 >UniRef50_B3DZC7 5'-3' exonuclease n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZC7_METI4 Length = 296 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 67/259 (25%), Positives = 124/259 (47%), Gaps = 13/259 (5%) Query: 3 VHLLIVDALNLIRR-IHAVQ--------GSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + L++VD R +A+ + + L +L+ +P VFD Sbjct: 1 MRLVLVDGNYYAFRSFYAMPSLATRSGEPTNALYGLTMVLRRLLSDLKPELGAVVFDGGL 60 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + R DYKA RP +P L ++P ++ + G+ G EADD+ A+ K Sbjct: 61 PAE--RLALRADYKANRPEIPSALKSQLPWIKKLVKALGLCPIEVEGQEADDVIASYTKK 118 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW--LDAPFIDKEFGVQPQQLPDYWGL 171 + G + ++DK L+ +R+ +KR+ L I++++ V+P Q+PD L Sbjct: 119 AVEKGIDVVLATSDKDLMSLVGEHVRVYTVEKKRFKLLGQREIEEKWSVKPSQIPDVLAL 178 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G S +PGV GIG K+AT+ ++++ SL + + D ++ K LE +KE + + Sbjct: 179 IGDSVDNIPGVEGIGKKTATKWIIQYGSLFSLLQARDIPDRRFAKLLEENKERIMINWKM 238 Query: 232 ARLQTDLHIDGNLQQLRLV 250 L+ ++ + +++LR+V Sbjct: 239 LELKDNIELPLPIEELRIV 257 >UniRef50_B2A646 DNA polymerase I n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A646_NATTJ Length = 930 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 15/256 (5%) Query: 3 VHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 +++D +L+ R + + L +L+ P + VFD + Sbjct: 10 DKFVVIDGNSLLNRAFYALPLLQTKQGFFTNAIYGFTTMLLKLVQDESPNYLAVVFDTKA 69 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +RH + P+YK R P+E+ +MP L+ E + + G EADDL Sbjct: 70 KT--FRHHKFPEYKGHRDKAPDEMRPQMPMLKELLEAMNINYFEKDGYEADDLIGAFTKI 127 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 Q + +V+ DK QLL I + D + +EFGV +L D Sbjct: 128 AKQEDKETMVVTGDKDLLQLLDDKTTILLTKKGITQMESYDGEKVKEEFGVNVDKLIDLK 187 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G S VPGV G+G K+A +LL + LE +Y++LD V K + KL +K+ AFL + Sbjct: 188 ALTGDKSDNVPGVPGVGKKTALKLLNNYGDLEKLYKSLDGVGGKLQSKLADNKDKAFLSK 247 Query: 230 DIARLQTDLHIDGNLQ 245 ++ + + + NL Sbjct: 248 ELVTIDCEESLIENLD 263 >UniRef50_Q72ES3 DNA polymerase I n=3 Tax=Desulfovibrio vulgaris RepID=Q72ES3_DESVH Length = 1015 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 113/258 (43%), Gaps = 14/258 (5%) Query: 3 VHLLIVDALNLIRR-IHAVQG--------SPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L ++D I R +A Q + + L +L+ +P H V D Sbjct: 12 EPLWLMDGSAFIFRGFYAFQNMQRSDGFPTNALFIVTRILLRLLREEKPRHFAFVLD--G 69 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH P YKA R PE L ++ +R G+P + G EADD A+LA + Sbjct: 70 KGPTFRHDLFPLYKAQRAATPEPLVQQLEPIRRMVTALGLPLEVSDGCEADDCIASLAAR 129 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK--RWLDAPFIDKEFGVQPQQLPDYWGL 171 I+ DK Q L P + + D K + E G+ P Q PD + Sbjct: 130 YRDE-RPVVIIGADKDLKQCLHPNVVLWDPGAKEEKLTTLASFTAETGLTPAQWPDVQAV 188 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G +S +PG+ G+GPK+A+++ +F +LE I + D + +KK E H + FL R + Sbjct: 189 IGDTSDNIPGIPGVGPKTASKIFADFPTLEDIRDGFDRLPPNLQKKFEQHLDAMFLYRQL 248 Query: 232 ARLQTDLHIDGNLQQLRL 249 L D D ++L + Sbjct: 249 TTLAIDRCADLTPERLSV 266 >UniRef50_C3XEZ4 DNA polymerase I n=3 Tax=Bacteria RepID=C3XEZ4_9HELI Length = 1102 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 76/252 (30%), Positives = 122/252 (48%), Gaps = 19/252 (7%) Query: 4 HLLIVDALNLIRR-------IHAVQGSPC--VETCQHALDQLIMHSQPTHAVAVFDDENR 54 +++VD R +H + P + + L + + +F E Sbjct: 7 KVILVDTFGFFFRSYYALPPLHNSKHFPTSLLTGFATLIFNLYKEHKDS--CIIFTLEGG 64 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + R + P YKA R P++L ++P E+ G+P S G EADD ATLA Sbjct: 65 GTNRRKEFYPQYKANRKESPQDLLAQLPVAIEWLEKMGLPTLSLQGYEADDCIATLATLA 124 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 + G++ I+S DK QL+S + I DY +K+ + ++FGV P Y + G Sbjct: 125 KKDGYETQIISHDKDLYQLISEGIYIFDYAKKQAITQKECYEKFGVLPNDFIMYQSIVGD 184 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDA--------VAEKWRKKLETHKEMAF 226 SS VPG+ GIGPK A +L F+SLE +YE+++ + ++ ++ HKE AF Sbjct: 185 SSDNVPGIKGIGPKGAQSILAHFKSLESLYESIEKDYENIVSLLGKRTAGLIKEHKEQAF 244 Query: 227 LCRDIARLQTDL 238 + R++ L+TDL Sbjct: 245 ISRNLVTLRTDL 256 >UniRef50_A5TW64 DNA-directed DNA polymerase I n=10 Tax=Fusobacterium RepID=A5TW64_FUSNP Length = 914 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 22/268 (8%) Query: 3 VHLLIVDALNLIRRIHAVQ--------GSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 +++D ++ R + + V + L +I +P + A FD + R Sbjct: 2 KKAVLLDVSAIMYRAYFANMNFRTKNEPTGAVYGFINTLLSIINEFKPDYMAAAFDVK-R 60 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 SS R + DYK+ R PE+L ++P + + + + G EADD+ +LA K+ Sbjct: 61 SSLKRTEIYSDYKSNRQSAPEDLITQIPRIEEVLDAFNINRYKIEGYEADDVLGSLAKKL 120 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQ-------KRWLDAPFIDKEFGVQPQQLPD 167 + + IV+ DK QL+ + + + ++ + GV P+++PD Sbjct: 121 AKQDIEVIIVTGDKDLSQLVEKNITVALLGKGAEGEKFGTLKNSDDVVNYLGVVPEKIPD 180 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA------EKWRKKLETH 221 +GL G S +PGV IG K A + ++ SLE IYEN+D + K L Sbjct: 181 LFGLIGDKSDGIPGVTKIGEKKALAIFSQYDSLEKIYENIDNLKSIDGIGPSLIKNLINE 240 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLRL 249 K++AF+ R++A++ T+L ID L+ Sbjct: 241 KDIAFMSRELAKIFTNLDIDVEESGLQY 268 >UniRef50_A4Y4Y4 Uncharacterized exonuclease xni n=21 Tax=Shewanella RepID=XNI_SHEPC Length = 262 Score = 263 bits (672), Expect = 6e-69, Method: Composition-based stats. Identities = 101/250 (40%), Positives = 141/250 (56%), Gaps = 8/250 (3%) Query: 4 HLLIVDALNLIRRIHAV-----QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGW 58 LI+D LNL+RRI+A E A +L+ P+H V+D + W Sbjct: 3 KFLIIDGLNLVRRIYAAIPDENDMESLKERVTSACTKLLRVHHPSHIAIVWDGDE--ISW 60 Query: 59 RHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAG 118 R Q PDYK GR PMPE L + AL+ + + EADD+ ATLAVK +A Sbjct: 61 RKQLYPDYKKGRKPMPEPLAQGLRALQEHLATLNIASIYAAA-EADDVIATLAVKTAKAQ 119 Query: 119 HQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSK 178 +A IVSTDKG+ QL P + D+F +++LD ++++ GV Q D LAG S +K Sbjct: 120 GEAIIVSTDKGFSQLNHPRITQWDHFNQQYLDIAALEQKLGVDRSQFLDLMALAGDSGNK 179 Query: 179 VPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDL 238 +PG+AGIGPKSA +LL F++L ++ +L + K KKL KEMA L +A+LQTDL Sbjct: 180 IPGIAGIGPKSAAELLKTFRTLSTLFSSLPNLGAKQAKKLAEGKEMARLSYKLAQLQTDL 239 Query: 239 HIDGNLQQLR 248 ++ NL+ R Sbjct: 240 PLNINLKDFR 249 >UniRef50_C6C0R6 DNA polymerase I n=3 Tax=Desulfovibrio RepID=C6C0R6_DESAD Length = 904 Score = 262 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 14/258 (5%) Query: 3 VHLLIVDALNLIRR-IHAVQ--------GSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L ++D R HA + + L ++I +P + V + D Sbjct: 12 DPLYLIDGSAFFYRGFHAYPDLKRSDGVPTNAMFFVLRTLLKVIKEEKPKYLVFILD--G 69 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH+ YKA RPPMP++L ++ L+ A GVP + G EADD A+LA + Sbjct: 70 KGKNFRHELYDQYKAQRPPMPDDLRSQIEPLKEALNVIGVPLIVSEGEEADDCIASLAAR 129 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYF--QKRWLDAPFIDKEFGVQPQQLPDYWGL 171 ++ I+ DK Q L + + D +++ ++ ++P+Q D+ L Sbjct: 130 Y-KSERPVVILGADKDLKQCLDENVFMWDPAGKKEKITSLADFREDTKLEPEQWADFQAL 188 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G S+ +PGV G+G +AT+++ E+ +LE I +N D + +KK++ E F+ R++ Sbjct: 189 VGDSADNIPGVPGVGKVTATKIMAEYPTLEDIRDNYDKLKPAIQKKMKDELENIFVYREL 248 Query: 232 ARLQTDLHIDGNLQQLRL 249 R++ D +L+Q L Sbjct: 249 TRMRLGSCSDCDLKQCEL 266 >UniRef50_Q21SR9 5'-3' exonuclease n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SR9_RHOFD Length = 270 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 89/258 (34%), Positives = 134/258 (51%), Gaps = 11/258 (4%) Query: 3 VHLLIVDALNLIRRIHAVQGSP--------CVETCQHALDQLIMHSQPTHAVAVFDDENR 54 + LLI+DALN+IRRIH P +++ + + + +PTHAVAVFD R Sbjct: 1 MSLLIIDALNIIRRIHEAIAEPDSEEKVADTIKSSLGSFKRALKTHRPTHAVAVFDHGGR 60 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + W+H Y+A R PMP+ L D + L+ G+ + G EADD A L K Sbjct: 61 T--WKHDLYDGYQANRKPMPQPLRDGLLTLKRELHDMGLHWIAIEGIEADDAIAALVEKW 118 Query: 115 TQ-AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 + + QA I+STDK + QLL+ + I D+F++ W D+ ++ ++FGV P Q+ D L G Sbjct: 119 CKYSAKQAIILSTDKDFLQLLNDQVCIYDHFKEVWRDSAYVQEKFGVTPSQMGDLLALMG 178 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR 233 + VPGV +G K+A LL +L+ + N D V + L E+A L R + Sbjct: 179 DAVDGVPGVDKVGRKTAATLLRINGNLDRLISNADKVGGQVGANLRKGIEIARLSRQLVS 238 Query: 234 LQTDLHIDGNLQQLRLVR 251 +TD + + L VR Sbjct: 239 FKTDRPLGLTWKMLAQVR 256 >UniRef50_C5BR48 5'-3' exonuclease n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BR48_TERTT Length = 301 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 22/268 (8%) Query: 2 AVHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 + + ++DA I R + Q + V L + + +P + FD Sbjct: 6 SDTVYLIDASIYIFRYYFSLPDNWWGREHQPTAAVYGYGRWLLRFLKAVRPKYIACCFD- 64 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 E+ +S +R++ P YKA R E L ++ A + G+ +++ EADDL ATLA Sbjct: 65 ESLTSCFRNELYPGYKASRALPDESLAFQLAACKGLSAAYGLATYASPRFEADDLIATLA 124 Query: 112 VKVTQAGHQATIVSTDKGYCQLL-SPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 K + G +VS DK Q++ + + D+ + LD+ I ++G+ P+Q+ D+ Sbjct: 125 AKSRKRGLSVCVVSRDKDLSQIIRTARDTLWDFPDREPLDSDAIFAKYGIYPEQMADFLA 184 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-------KWRKKLETHKE 223 L G S +PGVAGIG K+A LL EF S I N + VA+ K KL + Sbjct: 185 LVGDPSDDIPGVAGIGGKTAAALLAEFGSWREIRRNYNRVAKCAIRGAAKLGDKLAAAEA 244 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRLVR 251 L R +AR+ +D + R+ R Sbjct: 245 QIELSRQLARVASDAPLGAR---FRVTR 269 >UniRef50_C3WHF0 DNA polymerase I n=3 Tax=Fusobacterium RepID=C3WHF0_9FUSO Length = 916 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 22/268 (8%) Query: 3 VHLLIVDALNLIRRIHAVQ--------GSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 +++D ++ R + + V + L +I P + A FD + R Sbjct: 2 KRAVLLDVSAIMYRAYFANMNFRTKNEPTGAVYGFINTLLSIIKEFNPDYMAAAFDVK-R 60 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 SS R + DYK+ R PE+L ++P + + + + EADD+ ++A K+ Sbjct: 61 SSLKRTEIFGDYKSNRQSTPEDLVAQIPRIEEVLDAFNINRYRIESYEADDVLGSIAKKI 120 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW-------LDAPFIDKEFGVQPQQLPD 167 + + IV+ DK QL+ + I + A + GV P+++PD Sbjct: 121 AKDDLEVIIVTGDKDLSQLVEKNITIALLGKGTEGEKFGMLRTAEDVVNYLGVVPEKIPD 180 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA------EKWRKKLETH 221 +GL G S +PGV IG K A + ++ SLE IYEN+D + K L Sbjct: 181 LFGLIGDKSDGIPGVTKIGEKKALAIFSKYDSLEKIYENIDDLKNIEGIGPSLIKNLTNE 240 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLRL 249 K++AFL R++A++ T+L I+ + L+ Sbjct: 241 KDIAFLSRELAKIFTNLDINLEEENLKY 268 >UniRef50_Q8K9D0 5'-3' exonuclease n=4 Tax=Buchnera aphidicola RepID=EX53_BUCAP Length = 287 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 68/267 (25%), Positives = 129/267 (48%), Gaps = 19/267 (7%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLI-MHSQPTHAVAVFDD 51 ++IVD + R + S + + ++ + + +FD Sbjct: 6 KKPIIIVDGSLYLYRSYFTFQNFNSNEENPSGAIYGMLKTIQNILNKNYNSKKIIIIFDS 65 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +R+ +YK+ R MP +L+ ++ L E+ G+ S G EADD+ +LA Sbjct: 66 SKK--NFRNTIFKEYKSNRSAMPNKLYVQIQPLFKILEEIGIKTLSILGIEADDIIGSLA 123 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 K+ Q G Q IVS DK QL++ + + + + L I +++G+ P++ D L Sbjct: 124 YKLEQKGEQVLIVSHDKDMIQLITDNINVLNISKNSILTPEKIQEKYGIYPKEFIDLLAL 183 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEM 224 G SS +PGV IG K+A LL +F +++ IY N++ + A+ +L+ +K+ Sbjct: 184 MGDSSDNIPGVPKIGIKTALFLLKKFSNIKNIYNNIEKIQSLPFRNAKNAAIQLKNYKKT 243 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRLVR 251 AFL +A+++ D+ I+ +++ L + Sbjct: 244 AFLSYQLAKIKLDVPINITSEEITLKK 270 >UniRef50_UPI0001978038 DNA polymerase I n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001978038 Length = 913 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 71/257 (27%), Positives = 107/257 (41%), Gaps = 15/257 (5%) Query: 4 HLLIVDALNLIRR-------IHAVQGSPC--VETCQHALDQLIMHSQPTHAVAVFDDENR 54 L ++D R + QG P + + L L P+ F E Sbjct: 3 TLSVIDTFGFFFRSFYALPPLKNSQGFPTGLLVGFCNLLQSLYKD--PSCTYIAFALEGG 60 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 R +YKA R PEEL ++P + G S G EADD+ A++ Sbjct: 61 GRNKRRDIYSEYKANRQAAPEELRLQLPIAIEWIAKMGFLNISIEGYEADDVVASINKVA 120 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 I+S DK QL+ I D K+ + +++GV P+ DY L G Sbjct: 121 NAQNITVRIISHDKDLYQLIDENTYIYDPIGKKDIKEAQCLQKYGVYPKNFIDYQSLVGD 180 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV----AEKWRKKLETHKEMAFLCRD 230 SS V GV GIG KSA +L+ F S+E +Y +D V + K ++ K+ AFL + Sbjct: 181 SSDNVMGVKGIGAKSAQKLIQRFGSIESLYARIDEVESATTPRIAKLIKEGKDNAFLSKK 240 Query: 231 IARLQTDLHIDGNLQQL 247 + L +L + +L + Sbjct: 241 LVTLYDNLLENIDLNKC 257 >UniRef50_Q4UR88 Exodeoxyribonuclease IX n=14 Tax=Bacteria RepID=Q4UR88_XANC8 Length = 332 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 104/259 (40%), Gaps = 18/259 (6%) Query: 2 AVHLLIVDALNLIRRI-HAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 V L +VDA + R H++ + V L L+ +P H FD Sbjct: 22 PVPLYLVDASLYVFRAWHSIPDEFQDAQGWPTNAVHGFARFLLDLLERERPQHITIAFD- 80 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 E S +RH P YK R P P+ L + +A G+ + EADDL + Sbjct: 81 EALDSCFRHAIYPAYKGNREPAPDALRRQFAHCKALCAALGLSVLAHREYEADDLIGSAL 140 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 G + IVS DK QLL DY + + GV Q+ DY L Sbjct: 141 HSARARGLRGIIVSADKDLSQLLFEHDEQWDYARNVRWGMDGVKARHGVHAHQMADYLAL 200 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEM 224 G + +PG+ GIG KSA LL F SL+ + E LD + A + +L +E Sbjct: 201 CGDAIDNIPGITGIGAKSAAVLLAHFGSLDALLERLDELPFLRLRGAAQMALRLREQREH 260 Query: 225 AFLCRDIARLQTDLHIDGN 243 A L R + + D ++ Sbjct: 261 ALLWRQLTTIALDAPLELT 279 >UniRef50_B8IZN9 DNA polymerase I n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZN9_DESDA Length = 921 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 111/261 (42%), Gaps = 15/261 (5%) Query: 2 AVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 + ++D I R + + L +++ +P + + V + Sbjct: 11 TEPVFLMDGSAFIYRGFFANRNMQRSDGFPTNALVVVTRVLLRILREERPQYFLFV--KD 68 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH P YKA R PE+L +M + G+ + EADD A+LA Sbjct: 69 GKGKNFRHDIFPLYKANRDATPEDLVRQMQPIERMVTALGMNLEVSDHCEADDCIASLAA 128 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYF--QKRWLDAPFIDKEFGVQPQQLPDYWG 170 + +Q IV DK Q L P + + D ++ L A +E G+ P Q PD Sbjct: 129 RFSQE-RPVVIVGGDKDLKQCLGPNVYMWDPAFRDEKLLTAAQFTEESGLTPAQWPDVQA 187 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G +S +PGV GIGPK+A ++ SLE I ++ + K + KL H + F R Sbjct: 188 LVGDTSDNIPGVPGIGPKTAAKIFEICPSLEDIRDHFALLPPKIQDKLRDHLDEMFTWRK 247 Query: 231 IARLQTDLHIDGNLQQLRLVR 251 + L D+ + L LVR Sbjct: 248 LTTLSLDVCTAVEMDDL-LVR 267 >UniRef50_B2KCD2 DNA polymerase I n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCD2_ELUMP Length = 862 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 16/260 (6%) Query: 2 AVHLLIVDALNLIRR-IHAVQGSP--------CVETCQHALDQLIMHSQPTHAVAVFDDE 52 + I DA N + R HA+ + L +L+ +P + FD Sbjct: 5 KKTIYIADAHNFLHRNYHALPKLSTSQGLEVGALYGFVRWLVKLVEEKKPHYVAVCFDSR 64 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 S R + DYKA R P+ E L ++ R G+ ++ G EADD+ +A Sbjct: 65 G-GSTKRKKMFSDYKAHRKPVDEALLTQLQLAREVVSGMGLKVFAVQGIEADDIIGFIAK 123 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIR--DYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 K G A + ++DK QLL+ +++ ++ ++ ++F + + L DY Sbjct: 124 KSVAEGADAVLATSDKDALQLLNEHIKLWPAGAAKESLKGPDYVKEKFNIAQKYLTDYLA 183 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRK----KLETHKEMAF 226 + G SS VPGVAG+GPK+A +L+ F LE I + A K +K K+ ++ +A Sbjct: 184 IVGDSSDNVPGVAGLGPKTAAELINNFGYLEDIIKEAKAGNPKIKKGAAQKIIDNEAVAI 243 Query: 227 LCRDIARLQTDLHIDGNLQQ 246 L + + L ++ +D L+ Sbjct: 244 LSKQLVTLDENIPMDFTLED 263 >UniRef50_C1SHV2 DNA polymerase I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHV2_9BACT Length = 798 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 68/255 (26%), Positives = 125/255 (49%), Gaps = 18/255 (7%) Query: 6 LIVDALNLIRRIH---------AVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSS 56 +++D + R + A + + ++ LI + VFD + ++ Sbjct: 3 IVIDGSYIAFRTYHKSPPLTNSAGVPTSVIHGVMQSIITLINKYGRENIAVVFDAKGKNR 62 Query: 57 GWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQ 116 RH+ P+YKA R PE+L + + GV + G E DD+ AT+A Sbjct: 63 --RHEIHPEYKATRDATPEDLGLQFGIMDELIPLLGVAYYKVDGYEGDDIMATIA---AH 117 Query: 117 AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISS 176 +++ DK Q++ ++I D + + + ++FGV P+++ + LAG ++ Sbjct: 118 TKDDVGMLTKDKDIYQIVDDRVKIYDSQKGEFFGRDMVIEKFGVPPEKVRELLALAGDTA 177 Query: 177 SKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQT 236 +PGVAG+G K+A +LL E SL+GIYEN+++V K + KL +K+ A+L D+ L Sbjct: 178 DNIPGVAGVGVKTAAKLLNEHGSLDGIYENIESVKGKLKDKLIDNKDSAYLSYDLVGL-- 235 Query: 237 DLHIDGNLQQLRLVR 251 I ++ + +V+ Sbjct: 236 --DILESIPDVEIVK 248 >UniRef50_B5JW38 Exodeoxyribonuclease IX n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW38_9GAMM Length = 382 Score = 256 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 18/248 (7%) Query: 7 IVDALNLIRR--------IHAVQGSPC--VETCQHALDQLIMHSQPTHAVAVFDDENRSS 56 +VD+ + R + +G P V + QL+ QP+H FD + Sbjct: 6 LVDSSIYVFRSWHVMPDTLTDAEGHPANAVYGFADFVLQLLHSEQPSHIGFAFDLC-HAG 64 Query: 57 GWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQ 116 WR + YKA RPP P EL + R + G+ C+ + EADD+ T + + + Sbjct: 65 NWRREIDAQYKANRPPPPAELKRQFAHCRELLQASGLACFGSDRFEADDIIGTFSRSLRE 124 Query: 117 AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISS 176 G +TI++ DK QL+ + + + LD I K++G+ P+Q+ D L G S Sbjct: 125 QGFVSTIITGDKDLTQLIGEGDEWWEVARNKRLDYRGIHKQWGIYPEQVADLLALVGDKS 184 Query: 177 SKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE------KWRKKL-ETHKEMAFLCR 229 + GV G+G K+A LL +F ++G+ N+DA+ E K + L H++ L + Sbjct: 185 DNIAGVPGVGVKTAANLLKKFGDIDGVLNNIDAIGEMKFRSAKRIENLVRMHQDTIRLAK 244 Query: 230 DIARLQTD 237 + + D Sbjct: 245 LLTVIPDD 252 >UniRef50_C7N982 DNA polymerase I n=6 Tax=Leptotrichia RepID=C7N982_LEPBD Length = 1046 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 20/266 (7%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 +I+D ++ R H + + L+ +I +P + VA D + Sbjct: 2 KRAVILDTSAIMYRSHFALMGMRNSSGMSTGATFGFINTLESVIREFRPDYLVACLDVK- 60 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 R R L YKA R MPEEL ++ + + +P + +G EADD+ AT A K Sbjct: 61 RDELERTGELETYKAHRESMPEELVMQIDTIMKVLDGYRIPKYKKAGQEADDVIATFATK 120 Query: 114 V---TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQ-------KRWLDAPFIDKEFGVQPQ 163 + +++ DK QL+ + I + K + + GV P Sbjct: 121 FSNDADEQIEVFVITGDKDLTQLVDGKINIALLGKGDKNSAFKHIKTDEDVVEYLGVTPD 180 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 ++PD +GL G S +PGVAGIGPK+ +L+ + +LEGIYEN+D + K ++KL T KE Sbjct: 181 KIPDLFGLMGDKSDGIPGVAGIGPKNGVKLITTYGNLEGIYENIDEIKGKQKEKLLTDKE 240 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRL 249 AF+ R++A ++ +L ++ + +L+ Sbjct: 241 NAFISRELATVKRELDVEYDKNKLKF 266 >UniRef50_D0KVP7 5'-3' exonuclease, N-terminal resolvase-like domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KVP7_HALNC Length = 324 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 81/269 (30%), Positives = 125/269 (46%), Gaps = 32/269 (11%) Query: 7 IVDALNLIRRI-HAVQGS---------PCVETCQHALDQLIM-----HSQPT------H- 44 ++D+ I R H + + ++ AL L+ + QP+ H Sbjct: 16 LIDSHAQIWRAWHGAEKTLVDADDQPVGALQGFADALLTLLESVFDQNIQPSVTPHAEHG 75 Query: 45 --AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNE 102 V FD + +R P YKA RPP P EL ++P RA E G+ G E Sbjct: 76 PVIVCTFDAPC-NRSFRQTIYPAYKAHRPPAPAELTAQLPRCRALAEAAGLCAIDHPGYE 134 Query: 103 ADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQP 162 ADD+ TL ++ + TI++ DK QLL P R + +++ L +++ FGV+P Sbjct: 135 ADDVIGTLVQRLRKRNRAVTIITGDKDLAQLLGPDDRWFNPMRQKVLAYGDVERHFGVKP 194 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWR 215 QQ+ D+ L G S +PGV GIGP+ A LL + +++GIY NL AV A + + Sbjct: 195 QQIADWLALTGDVSDNIPGVPGIGPRIAGNLLKKHGTIDGIYANLAAVYGMKFRGAPRVQ 254 Query: 216 KKLETHKEMAFLCRDIARLQTDLHIDGNL 244 K L H+ + L R + + L I+ Sbjct: 255 KLLAEHESLVRLSRQLTGIVCTLPIEHTP 283 >UniRef50_Q3ICC5 Uncharacterized exonuclease xni n=3 Tax=Alteromonadales RepID=XNI_PSEHT Length = 257 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 99/260 (38%), Positives = 152/260 (58%), Gaps = 15/260 (5%) Query: 1 MAVHLLIVDALNLIRRIHAVQGSPCVET-----------CQHALDQLIMHSQPTHAVAVF 49 M HLL++DALNLIRRI+AV + + HA +L+ ++ THA+AVF Sbjct: 1 MKPHLLLIDALNLIRRIYAVDANQKHHSDEQMLKASCARVAHACSKLLSSTKATHAIAVF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + WR+ DYK R PMP+ L D + +AA E+ G+ + +EADD+ AT Sbjct: 61 DGD---KSWRYHFYKDYKHSRAPMPQILKDALVQFKAAIEETGIVVFEPINDEADDIIAT 117 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 LA K + + IVSTDKG+ L+ + + DYF+K +LD I + FGV+ ++L ++W Sbjct: 118 LANKASHNNISSVIVSTDKGFLPFLNEHIAVYDYFKKHYLDQDSIKQRFGVEQKKLVEFW 177 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 AG ++ +PGV GIG KSA L+ + S+E N DA++ RKKL + +M + + Sbjct: 178 AFAGDKTNDIPGVKGIGTKSAQLLVNNYSSVEDAL-NDDALSASLRKKLTENMDMYVISK 236 Query: 230 DIARLQTDLHIDGNLQQLRL 249 + L+TD+++ +L+QLRL Sbjct: 237 QLVSLRTDINLGFSLKQLRL 256 >UniRef50_A8MQG8 Uncharacterized protein At3g52050.3 n=15 Tax=Magnoliophyta RepID=A8MQG8_ARATH Length = 448 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 43/290 (14%) Query: 4 HLLIVDALNLIRRIH-------------AVQGSP----CVETCQHALDQLIMHSQPTHAV 46 ++++D ++I R + G+ + + L ++ P+H Sbjct: 118 RVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLK-FLPSHVA 176 Query: 47 AVFDDEN----------------RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQ 90 VFD + + +RH P YK+ RPP P+ + + L+A+ + Sbjct: 177 VVFDHDGVPYGTTSNSSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASIKA 236 Query: 91 RGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR--- 147 + G EADD+ TLA++ AG + +VS DK + Q+LSP+LR+ + Sbjct: 237 MSIKVIEVPGVEADDVIGTLAMRSISAGFKVRVVSPDKDFFQILSPSLRLLRLTPRGSEM 296 Query: 148 -WLDAPFIDKEFG-VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYE 205 K+FG ++P Q D LAG S +PGV GIG A +L+ F +LE + + Sbjct: 297 ASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGTLENLLQ 356 Query: 206 NLDAVA-EKWRKKLETHKEMAFLCRDIARLQTDLH---IDGNLQQLRLVR 251 ++D + K ++ L + A L + +A L++DL + + + L + Sbjct: 357 SVDEIKEGKIKESLIASADQAILSKKLALLRSDLPDYIVPFDTKDLTFKK 406 >UniRef50_Q89AD1 5'-3' exonuclease n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=EX53_BUCBP Length = 302 Score = 252 bits (645), Expect = 8e-66, Method: Composition-based stats. Identities = 70/264 (26%), Positives = 136/264 (51%), Gaps = 18/264 (6%) Query: 3 VHLLIVDALNLIRRIHAVQ-------GSP--CVETCQHALDQLIMHSQPTHAVAVFDDEN 53 V+ L++D + + R + P + + L +++ ++ V +FD Sbjct: 8 VNYLLIDGTSYLYRAYYAFLKFKNNFNKPCGAIYGMLNMLRSMLLKYPYSNIVVIFDSPQ 67 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R++ YK RP MP +L +++ + + G+P S EADD+ TLA K Sbjct: 68 KT--FRNELFIPYKKNRPKMPNDLKEQILPIHHIIKHIGIPIISIPHVEADDIIGTLATK 125 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 + + + I + DK QL++ + + LD + K++G+ P+ +PD GL G Sbjct: 126 LYKKKYFILISTNDKDLAQLVNIHIHVLIGTSNIVLDESKVKKKYGIIPKLIPDLLGLMG 185 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKK-------LETHKEMAF 226 +S +PGV +G K+A LL F SLE IY N++ + + KK L T+K++AF Sbjct: 186 DNSDNIPGVPTVGKKTALILLKTFGSLENIYNNIEKIPKCLIKKAKTIYNNLHTYKKLAF 245 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 L + +A ++TD++++ ++++++ Sbjct: 246 LSQKLATIKTDINVNITTKKIKML 269 >UniRef50_A6SUA5 5'-3' exonuclease n=3 Tax=cellular organisms RepID=A6SUA5_JANMA Length = 261 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 72/253 (28%), Positives = 121/253 (47%), Gaps = 11/253 (4%) Query: 4 HLLIVDALNLIRRIH--------AVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 LL +D LN++RR++ A + + + +L+ PTH + FD + Sbjct: 3 KLLAIDGLNIVRRVYEANMEEDTAAKADAALRHSLASFRKLLNTHLPTHVLPAFDFGGHT 62 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 WRH P Y+ R PMPE L + +P + G+ S EADD+ AT ++ Sbjct: 63 --WRHDLYPRYRENRAPMPEVLRERLPDFYVQLTELGLHVVSVPEVEADDVIATGVLRWL 120 Query: 116 QAGH-QATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 G +A I STDK L+ I D+F+ W D+ +++ +FGV P+ L D L G Sbjct: 121 GEGRGEAIIASTDKDLHTLIEHGAVIWDHFKGEWHDSKWVESKFGVSPEMLTDLLALMGD 180 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARL 234 S +PGV+ +G K+A +LL + +++ I + + +KL K+ ++ R + L Sbjct: 181 VSDSIPGVSKVGVKTAAKLLQSYGNIDRIMAGAGILKDTLGEKLRKDKDQLYMSRQLVAL 240 Query: 235 QTDLHIDGNLQQL 247 + D+ + L Sbjct: 241 KDDVRMGVTWNML 253 >UniRef50_B1HWJ8 Probable 5'-3' exonuclease n=2 Tax=Bacillaceae RepID=B1HWJ8_LYSSC Length = 296 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 20/263 (7%) Query: 4 HLLIVDALNLIRR-----------IHAVQGSPC--VETCQHALDQLIMHSQPTHAVAVFD 50 LLIVD + L+ R I G+P + + +PTH +D Sbjct: 7 KLLIVDGMALLFRSFFASAAMGHFIRLADGTPTNGAQGFVRHVLTAQSLMKPTHMAVCWD 66 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +R++ YKA RP PEE+ + + Q G + G EADDL ++ Sbjct: 67 MGAHT--FRNELFDGYKANRPAPPEEMLPQFDMAKNLSLQMGWQNFGVKGMEADDLIGSM 124 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLP 166 K Q T++S DK QLL P+ I + Y + +E+ ++P Q Sbjct: 125 IAKW-QDDADITVISGDKDLLQLLRPSTEIAFMKKGYTEYDIYTHGRFKEEYSIEPAQFA 183 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 G +S PGV GIGPK A L+ + S++ + +L + R K++ +M Sbjct: 184 QVKAFMGDTSDGYPGVKGIGPKQALTLIQTYGSIDSVLASLGELKPGQRTKIQDQIDMLK 243 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 L ++A +QTD+ I+ +L L L Sbjct: 244 LSHELATIQTDVPIEADLSSLVL 266 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B9M4P2 DNA polymerase I n=3 Tax=Deltaproteobacteria Rep... 322 9e-87 UniRef50_A1ASW3 DNA polymerase I n=12 Tax=Deltaproteobacteria Re... 322 1e-86 UniRef50_Q04957 DNA polymerase I n=117 Tax=Firmicutes RepID=DPO1... 316 4e-85 UniRef50_B8D217 DNA polymerase I n=1 Tax=Halothermothrix orenii ... 315 7e-85 UniRef50_A6FZM5 DNA polymerase I n=2 Tax=Deltaproteobacteria Rep... 314 2e-84 UniRef50_B3TC83 Putative DNA polymerase family A n=1 Tax=uncultu... 313 3e-84 UniRef50_A0LCQ8 DNA polymerase I n=1 Tax=Magnetococcus sp. MC-1 ... 310 2e-83 UniRef50_A5GAH5 Ribonuclease H n=6 Tax=Desulfuromonadales RepID=... 310 3e-83 UniRef50_Q2LQV1 DNA polymerase I n=1 Tax=Syntrophus aciditrophic... 308 1e-82 UniRef50_Q6MPP6 DNA polymerase I n=1 Tax=Bdellovibrio bacteriovo... 307 2e-82 UniRef50_B6IUP1 DNA polymerase I, putative n=2 Tax=Alphaproteoba... 307 2e-82 UniRef50_Q6X9S0 DNA polymerase I n=3 Tax=Bacillales RepID=Q6X9S0... 307 2e-82 UniRef50_B0KAJ0 DNA polymerase I n=12 Tax=Thermoanaerobacterales... 307 3e-82 UniRef50_Q0AVE2 DNA polymerase I n=1 Tax=Syntrophomonas wolfei s... 306 6e-82 UniRef50_C7MNN5 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID... 305 1e-81 UniRef50_Q3ABL3 DNA polymerase I n=1 Tax=Carboxydothermus hydrog... 303 2e-81 UniRef50_C8W0H1 DNA polymerase I n=2 Tax=Clostridia RepID=C8W0H1... 303 3e-81 UniRef50_Q6X9Q9 DNA polymerase I n=1 Tax=Spirochaeta thermophila... 302 5e-81 UniRef50_Q59156 DNA polymerase I n=6 Tax=Clostridia RepID=DPO1_A... 302 7e-81 UniRef50_C4Z982 DNA polymerase I n=2 Tax=Clostridiales RepID=C4Z... 302 9e-81 UniRef50_D0XR83 DNA polymerase I n=2 Tax=Alphaproteobacteria Rep... 302 1e-80 UniRef50_Q1QDQ1 DNA polymerase I n=24 Tax=cellular organisms Rep... 302 1e-80 UniRef50_B8H5J7 DNA polymerase I n=23 Tax=Alphaproteobacteria Re... 301 1e-80 UniRef50_Q0F0N6 DNA polymerase I n=1 Tax=Mariprofundus ferrooxyd... 301 2e-80 UniRef50_O34996 DNA polymerase I n=38 Tax=Bacteria RepID=DPO1_BACSU 301 2e-80 UniRef50_B9KYZ1 DNA polymerase I n=4 Tax=Thermomicrobia (class) ... 300 3e-80 UniRef50_Q1NVM3 DNA polymerase A n=2 Tax=Deltaproteobacteria Rep... 299 5e-80 UniRef50_C9LLQ0 DNA polymerase I n=1 Tax=Dialister invisus DSM 1... 298 8e-80 UniRef50_A6TSU6 DNA polymerase I n=13 Tax=Clostridiaceae RepID=A... 298 1e-79 UniRef50_D1BM52 DNA polymerase I n=6 Tax=Veillonellaceae RepID=D... 298 1e-79 UniRef50_B2RLP5 DNA polymerase I n=2 Tax=Porphyromonas gingivali... 298 1e-79 UniRef50_A0PZF5 DNA polymerase I n=27 Tax=Clostridia RepID=A0PZF... 297 2e-79 UniRef50_A4YLA1 DNA polymerase I (POL I) n=63 Tax=cellular organ... 297 2e-79 UniRef50_C1A095 DNA polymerase I n=60 Tax=Actinomycetales RepID=... 297 3e-79 UniRef50_A7HP95 DNA polymerase I n=11 Tax=Alphaproteobacteria Re... 296 6e-79 UniRef50_B0TER6 DNA polymerase i n=2 Tax=Heliobacteriaceae RepID... 295 6e-79 UniRef50_A5WH47 DNA polymerase I n=4 Tax=Bacteria RepID=A5WH47_P... 295 7e-79 UniRef50_D0WFK8 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID... 295 1e-78 UniRef50_A9H4T5 DNA polymerase I n=43 Tax=Alphaproteobacteria Re... 294 2e-78 UniRef50_B6R626 DNA polymerase I superfamily protein n=1 Tax=Pse... 294 2e-78 UniRef50_B7LVW5 Uncharacterized exonuclease xni n=98 Tax=Enterob... 294 2e-78 UniRef50_Q2JCJ5 DNA polymerase I n=10 Tax=Actinomycetales RepID=... 294 2e-78 UniRef50_D2RIE4 DNA polymerase I n=5 Tax=Clostridiales RepID=D2R... 294 2e-78 UniRef50_Q9S1G2 DNA polymerase I n=25 Tax=Rhizobiales RepID=DPO1... 293 4e-78 UniRef50_C4LIB4 DNA polymerase I n=1 Tax=Corynebacterium kroppen... 293 4e-78 UniRef50_Q1RH76 DNA polymerase I n=18 Tax=Rickettsia RepID=DPO1_... 293 5e-78 UniRef50_Q9F173 DNA polymerase I n=177 Tax=Proteobacteria RepID=... 292 5e-78 UniRef50_C1XI40 DNA polymerase I n=24 Tax=Bacteria RepID=C1XI40_... 292 6e-78 UniRef50_Q9RAA9 DNA polymerase I n=2 Tax=spotted fever group Rep... 292 6e-78 UniRef50_D0L9T3 DNA polymerase I n=2 Tax=Corynebacterineae RepID... 292 6e-78 UniRef50_C8PRX0 DNA polymerase I n=1 Tax=Treponema vincentii ATC... 292 7e-78 UniRef50_B1YKA1 DNA polymerase I n=3 Tax=Bacilli RepID=B1YKA1_EXIS2 292 8e-78 UniRef50_A6CAX6 DNA polymerase I n=2 Tax=Planctomycetaceae RepID... 292 9e-78 UniRef50_C0ZE02 Putative 5'-3' exonuclease n=1 Tax=Brevibacillus... 291 1e-77 UniRef50_Q1V0V5 DNA polymerase I n=3 Tax=Candidatus Pelagibacter... 291 2e-77 UniRef50_B2V602 5'-3' exonuclease n=4 Tax=Hydrogenothermaceae Re... 291 2e-77 UniRef50_P43741 DNA polymerase I n=222 Tax=cellular organisms Re... 291 2e-77 UniRef50_C1ZLA6 DNA polymerase I n=1 Tax=Planctomyces limnophilu... 290 2e-77 UniRef50_A0LIP7 DNA polymerase I n=1 Tax=Syntrophobacter fumarox... 290 3e-77 UniRef50_Q4JW27 DNA polymerase I n=2 Tax=Corynebacterium jeikeiu... 290 3e-77 UniRef50_C6XHK7 DNA polymerase I n=1 Tax=Candidatus Liberibacter... 290 3e-77 UniRef50_C3U0N1 Truncated DNA polymerase I n=1 Tax=uncultured ba... 290 3e-77 UniRef50_B8FU82 DNA polymerase I n=2 Tax=Desulfitobacterium hafn... 289 5e-77 UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkalip... 289 5e-77 UniRef50_B2TNM6 DNA polymerase I n=7 Tax=Clostridiales RepID=B2T... 289 6e-77 UniRef50_Q2RHE8 DNA polymerase I n=4 Tax=Clostridia RepID=Q2RHE8... 289 6e-77 UniRef50_C7GEY2 DNA polymerase I n=6 Tax=Clostridiales RepID=C7G... 289 7e-77 UniRef50_Q1PUU8 Stongly similair to DNA polymerase I n=1 Tax=Can... 289 7e-77 UniRef50_C5CBM1 DNA polymerase I n=2 Tax=Micrococcus luteus NCTC... 289 8e-77 UniRef50_B1BYY4 DNA polymerase I n=4 Tax=Bacteria RepID=B1BYY4_9... 289 8e-77 UniRef50_A6G5W6 DNA polymerase I n=2 Tax=cellular organisms RepI... 288 9e-77 UniRef50_P52028 DNA polymerase I, thermostable n=18 Tax=Bacteria... 288 1e-76 UniRef50_Q1AUF6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilu... 287 2e-76 UniRef50_Q2S226 DNA polymerase I n=4 Tax=Rhodothermaceae RepID=Q... 287 2e-76 UniRef50_C7HT94 DNA polymerase I n=1 Tax=Anaerococcus vaginalis ... 287 2e-76 UniRef50_O67550 5'-3' exonuclease n=2 Tax=Aquificaceae RepID=EX5... 287 2e-76 UniRef50_UPI0001976BF8 DNA polymerase I n=1 Tax=Bifidobacterium ... 287 2e-76 UniRef50_A9NF42 DNA polymerase I n=1 Tax=Acholeplasma laidlawii ... 287 2e-76 UniRef50_A6NVK8 DNA polymerase I n=2 Tax=Bacteria RepID=A6NVK8_9... 287 3e-76 UniRef50_D0YSZ1 DNA polymerase I n=6 Tax=Actinobacteridae RepID=... 286 3e-76 UniRef50_C4Z0G0 DNA polymerase I n=23 Tax=Bacteria RepID=C4Z0G0_... 286 3e-76 UniRef50_D1VS49 DNA polymerase I n=1 Tax=Peptoniphilus lacrimali... 286 3e-76 UniRef50_Q21YU4 DNA polymerase I n=39 Tax=Betaproteobacteria Rep... 286 4e-76 UniRef50_Q02DA6 DNA polymerase I n=1 Tax=Candidatus Solibacter u... 285 7e-76 UniRef50_A0JWM3 DNA polymerase I n=7 Tax=Actinobacteria (class) ... 285 8e-76 UniRef50_C4FFL7 Putative uncharacterized protein n=2 Tax=Bifidob... 285 8e-76 UniRef50_B0VJ17 DNA polymerase I n=1 Tax=Candidatus Cloacamonas ... 285 9e-76 UniRef50_C3J9S9 DNA polymerase type I n=2 Tax=Bacteria RepID=C3J... 285 1e-75 UniRef50_A7NJD5 DNA polymerase I n=2 Tax=Roseiflexus RepID=A7NJD... 285 1e-75 UniRef50_B2UNN5 DNA polymerase I n=1 Tax=Akkermansia muciniphila... 285 1e-75 UniRef50_B6G9J6 Putative uncharacterized protein n=2 Tax=Collins... 285 1e-75 UniRef50_C2D755 DNA-directed DNA polymerase n=1 Tax=Atopobium va... 284 2e-75 UniRef50_B0S404 DNA polymerase I n=2 Tax=Finegoldia magna RepID=... 284 2e-75 UniRef50_B1GZ14 DNA polymerase I n=1 Tax=uncultured Termite grou... 284 2e-75 UniRef50_D1CFH6 DNA polymerase I n=1 Tax=Thermobaculum terrenum ... 284 2e-75 UniRef50_D1PTJ0 DNA-directed DNA polymerase I (Fragment) n=1 Tax... 283 3e-75 UniRef50_O08307 DNA polymerase I n=4 Tax=Chloroflexi (class) Rep... 283 3e-75 UniRef50_Q2GBP7 DNA polymerase I n=10 Tax=Alphaproteobacteria Re... 283 3e-75 UniRef50_Q1D7R1 DNA polymerase I n=4 Tax=Myxococcaceae RepID=Q1D... 283 3e-75 UniRef50_A7HD60 DNA polymerase I n=2 Tax=Cystobacterineae RepID=... 283 4e-75 UniRef50_C2BWF0 DNA-directed DNA polymerase n=1 Tax=Mobiluncus c... 283 4e-75 UniRef50_C8W7U1 DNA polymerase I n=3 Tax=Coriobacteriaceae RepID... 283 4e-75 UniRef50_B1WPN5 DNA polymerase I n=13 Tax=Bacteria RepID=B1WPN5_... 283 5e-75 UniRef50_B1C859 DNA polymerase I n=1 Tax=Anaerofustis stercoriho... 283 5e-75 UniRef50_B8DUU4 DNA polymerase I n=16 Tax=Bifidobacterium RepID=... 282 7e-75 UniRef50_P46835 DNA polymerase I n=51 Tax=Actinobacteridae RepID... 282 9e-75 UniRef50_Q1JIU7 DNA polymerase I n=14 Tax=Streptococcus RepID=Q1... 281 1e-74 UniRef50_A6KZN3 DNA polymerase I n=15 Tax=Bacteroides RepID=A6KZ... 281 1e-74 UniRef50_B0PCZ2 DNA polymerase I n=3 Tax=Clostridiales RepID=B0P... 281 1e-74 UniRef50_UPI0001744922 DNA polymerase I n=1 Tax=Verrucomicrobium... 281 1e-74 UniRef50_A8R8A1 DNA polymerase I n=2 Tax=unclassified Erysipelot... 281 2e-74 UniRef50_D2RAL7 DNA-directed DNA polymerase n=2 Tax=Gardnerella ... 280 2e-74 UniRef50_B5YG86 DNA polymerase I n=1 Tax=Thermodesulfovibrio yel... 280 2e-74 UniRef50_Q252Y8 DNA polymerase I n=14 Tax=Chlamydiaceae RepID=Q2... 280 3e-74 UniRef50_B9Y7P1 DNA polymerase I n=2 Tax=Erysipelotrichaceae Rep... 280 3e-74 UniRef50_Q65W28 PolA protein n=42 Tax=Bacteria RepID=Q65W28_MANSM 280 3e-74 UniRef50_Q3Z6P9 DNA-directed DNA polymerase I n=5 Tax=Dehalococc... 280 4e-74 UniRef50_A8USN7 DNA polymerase I 3'-5' exo domain n=1 Tax=Hydrog... 280 4e-74 UniRef50_A8SN89 DNA polymerase I n=2 Tax=Clostridiales Family XI... 280 4e-74 UniRef50_C0X9C1 Possible DNA polymerase I (Fragment) n=1 Tax=Ent... 279 5e-74 UniRef50_D1Y4U0 DNA polymerase I n=1 Tax=Pyramidobacter piscolen... 279 5e-74 UniRef50_C8NZ98 DNA polymerase I n=1 Tax=Erysipelothrix rhusiopa... 279 5e-74 UniRef50_A5CDT3 DNA polymerase I n=2 Tax=Orientia tsutsugamushi ... 279 5e-74 UniRef50_P59200 DNA polymerase I n=187 Tax=Firmicutes RepID=DPO1... 279 7e-74 UniRef50_C0E6N1 Putative uncharacterized protein n=1 Tax=Coryneb... 279 8e-74 UniRef50_UPI00016BFC66 DNA polymerase I n=1 Tax=Epulopiscium sp.... 278 1e-73 UniRef50_A9ITV6 DNA polymerase I n=89 Tax=Proteobacteria RepID=A... 278 1e-73 UniRef50_B4U0B7 DNA polymerase I n=5 Tax=Streptococcus RepID=B4U... 278 2e-73 UniRef50_C7GZ50 DNA polymerase I n=1 Tax=Eubacterium saphenum AT... 277 2e-73 UniRef50_B8I3Y7 DNA polymerase I n=6 Tax=Clostridium RepID=B8I3Y... 277 2e-73 UniRef50_B2GGW1 DNA polymerase I n=1 Tax=Kocuria rhizophila DC22... 277 2e-73 UniRef50_C6W4A8 DNA polymerase I n=44 Tax=Bacteria RepID=C6W4A8_... 276 3e-73 UniRef50_Q55971 DNA polymerase I n=13 Tax=Cyanobacteria RepID=DP... 276 4e-73 UniRef50_C2MBR8 DNA polymerase type I n=1 Tax=Porphyromonas ueno... 276 6e-73 UniRef50_C7H3Z2 DNA polymerase I n=2 Tax=Ruminococcaceae RepID=C... 275 8e-73 UniRef50_Q2JPZ4 DNA polymerase I n=3 Tax=Cyanobacteria RepID=Q2J... 275 1e-72 UniRef50_Q7WZP8 DNA polymerase type I n=2 Tax=unclassified Bacte... 274 2e-72 UniRef50_Q4L6E6 Similar to 5&apos n=2 Tax=Staphylococcus RepID=Q... 274 2e-72 UniRef50_B0MR22 DNA polymerase I n=1 Tax=Eubacterium siraeum DSM... 274 2e-72 UniRef50_D1AJI6 DNA polymerase I n=2 Tax=Fusobacteriaceae RepID=... 274 2e-72 UniRef50_C6CWL9 5'-3' exonuclease n=3 Tax=Bacillales RepID=C6CWL... 274 2e-72 UniRef50_C1TPP4 DNA polymerase I n=2 Tax=Synergistaceae RepID=C1... 274 2e-72 UniRef50_A9G0B1 DNA polymerase I n=3 Tax=Sorangium cellulosum 'S... 273 3e-72 UniRef50_D1R879 Putative uncharacterized protein n=1 Tax=Parachl... 273 4e-72 UniRef50_Q11NX3 DNA polymerase I n=11 Tax=Bacteria RepID=Q11NX3_... 272 7e-72 UniRef50_Q04G12 DNA polymerase I n=28 Tax=Lactobacillales RepID=... 272 9e-72 UniRef50_A5EWG4 DNA polymerase I n=10 Tax=Gammaproteobacteria Re... 271 1e-71 UniRef50_B9L837 DNA polymerase I n=2 Tax=Nautiliaceae RepID=B9L8... 271 1e-71 UniRef50_D2R075 DNA polymerase I n=1 Tax=Pirellula staleyi DSM 6... 271 1e-71 UniRef50_C5CIW2 DNA polymerase I n=1 Tax=Kosmotoga olearia TBF 1... 271 1e-71 UniRef50_D0LQ66 DNA polymerase I n=1 Tax=Haliangium ochraceum DS... 271 1e-71 UniRef50_C5RBK8 DNA polymerase I n=9 Tax=Lactobacillales RepID=C... 271 1e-71 UniRef50_Q7UI29 DNA polymerase I n=1 Tax=Rhodopirellula baltica ... 271 1e-71 UniRef50_C4GAN0 Putative uncharacterized protein n=1 Tax=Shuttle... 271 1e-71 UniRef50_B0MYJ0 Putative uncharacterized protein n=1 Tax=Alistip... 271 2e-71 UniRef50_D2QFD0 DNA polymerase I n=3 Tax=Bacteria RepID=D2QFD0_9... 271 2e-71 UniRef50_UPI0001C32326 DNA polymerase I n=1 Tax=Conexibacter woe... 270 3e-71 UniRef50_Q73M72 DNA polymerase I n=1 Tax=Treponema denticola Rep... 270 4e-71 UniRef50_B9YEU0 DNA polymerase I n=2 Tax=Cyanobacteria RepID=B9Y... 270 4e-71 UniRef50_Q8NWQ2 MW1329 protein n=63 Tax=Staphylococcaceae RepID=... 270 4e-71 UniRef50_D0RQG2 DNA polymerase I n=1 Tax=alpha proteobacterium H... 270 4e-71 UniRef50_Q5HCC8 DNA polymerase I n=14 Tax=Rickettsiales RepID=Q5... 270 5e-71 UniRef50_Q2GI23 DNA polymerase I n=6 Tax=Rickettsiales RepID=Q2G... 269 5e-71 UniRef50_Q118S8 DNA polymerase I n=4 Tax=Cyanobacteria RepID=Q11... 269 5e-71 UniRef50_B4S5F3 DNA polymerase I n=12 Tax=Chlorobiaceae RepID=B4... 269 6e-71 UniRef50_P74933 DNA polymerase I n=3 Tax=Bacteria RepID=DPO1_TREPA 269 7e-71 UniRef50_Q14QK7 DNA polymerase I n=1 Tax=Spiroplasma citri RepID... 268 8e-71 UniRef50_Q67KY2 DNA polymerase I n=1 Tax=Symbiobacterium thermop... 268 1e-70 UniRef50_C7RDU0 DNA polymerase I n=3 Tax=Anaerococcus RepID=C7RD... 267 2e-70 UniRef50_UPI0001C17162 DNA polymerase A n=2 Tax=Nostocaceae RepI... 267 2e-70 UniRef50_Q2GD93 DNA polymerase I n=2 Tax=Neorickettsia RepID=Q2G... 267 3e-70 UniRef50_Q6MEQ2 Probable DNA polymerase I n=1 Tax=Candidatus Pro... 266 4e-70 UniRef50_B1VB35 DNA polymerase I n=1 Tax=Candidatus Phytoplasma ... 265 7e-70 UniRef50_C0E901 Putative uncharacterized protein (Fragment) n=2 ... 265 8e-70 UniRef50_A9BEU8 DNA polymerase I n=1 Tax=Petrotoga mobilis SJ95 ... 265 8e-70 UniRef50_UPI0001BC5C75 DNA polymerase I n=3 Tax=Fusobacterium Re... 265 9e-70 UniRef50_Q9HT80 DNA polymerase I n=9 Tax=Gammaproteobacteria Rep... 265 9e-70 UniRef50_B6YQQ9 DNA polymerase I n=13 Tax=Bacteroidales RepID=B6... 265 1e-69 UniRef50_A0RC28 5'-3' exonuclease n=75 Tax=Bacillus RepID=A0RC28... 264 2e-69 UniRef50_Q83GI7 DNA polymerase I n=2 Tax=Tropheryma whipplei Rep... 263 3e-69 UniRef50_A7HJZ2 DNA polymerase I n=11 Tax=Bacteria RepID=A7HJZ2_... 263 3e-69 UniRef50_C5B5N3 DNA polymerase I n=1 Tax=Methylobacterium extorq... 263 4e-69 UniRef50_C0QYF7 DNA polymerase I n=3 Tax=Brachyspira RepID=C0QYF... 263 5e-69 UniRef50_B0KVB0 Putative 5'-3' exonuclease n=1 Tax=uncultured ca... 262 7e-69 UniRef50_D1B5M0 DNA polymerase I n=1 Tax=Thermanaerovibrio acida... 262 7e-69 UniRef50_Q6KHF6 DNA polymerase I n=1 Tax=Mycoplasma mobile RepID... 261 1e-68 UniRef50_Q30VQ3 DNA polymerase I n=7 Tax=Desulfovibrionales RepI... 261 2e-68 UniRef50_C1A3H5 DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca... 261 2e-68 UniRef50_Q04Q27 DNA-directed DNA polymerase n=4 Tax=Leptospira R... 261 2e-68 UniRef50_B7FRK5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 260 2e-68 UniRef50_Q2SRK9 DNA polymerase I n=4 Tax=Mollicutes RepID=Q2SRK9... 260 2e-68 UniRef50_A6DML3 DNA-directed DNA polymerase, DNA polimerase I pr... 260 4e-68 UniRef50_B6WQX5 Putative uncharacterized protein n=1 Tax=Desulfo... 260 4e-68 UniRef50_B2IJU1 DNA polymerase I n=25 Tax=cellular organisms Rep... 259 5e-68 UniRef50_Q1II21 DNA polymerase I n=2 Tax=Acidobacteria RepID=Q1I... 259 7e-68 UniRef50_P52027 DNA polymerase I n=4 Tax=Deinococci RepID=DPO1_D... 258 1e-67 UniRef50_D2NTK8 DNA polymerase I n=2 Tax=Rothia mucilaginosa Rep... 258 1e-67 UniRef50_C9RNE9 DNA polymerase I n=1 Tax=Fibrobacter succinogene... 258 1e-67 UniRef50_D1AZX7 DNA polymerase I n=3 Tax=Campylobacterales RepID... 257 2e-67 UniRef50_A5CXW1 DNA polymerase I n=2 Tax=sulfur-oxidizing symbio... 257 2e-67 UniRef50_Q1LTX9 DNA polymerase I n=1 Tax=Baumannia cicadellinico... 257 3e-67 UniRef50_A3EQ00 DNA polymerase I n=3 Tax=Leptospirillum RepID=A3... 256 3e-67 UniRef50_Q30R59 DNA polymerase A n=6 Tax=Epsilonproteobacteria R... 256 4e-67 UniRef50_C6C0R6 DNA polymerase I n=3 Tax=Desulfovibrio RepID=C6C... 256 5e-67 UniRef50_B2A646 DNA polymerase I n=1 Tax=Natranaerobius thermoph... 256 6e-67 UniRef50_C9Y9S8 Putative uncharacterized protein n=1 Tax=Curviba... 255 9e-67 UniRef50_A5TW64 DNA-directed DNA polymerase I n=10 Tax=Fusobacte... 255 1e-66 UniRef50_Q2NK60 DNA polymerase I n=5 Tax=Candidatus Phytoplasma ... 255 2e-66 UniRef50_B3PMZ8 5'-3' exonuclease, exo domain of DNA polymerase ... 254 2e-66 UniRef50_B0SCM1 DNA-directed DNA polymerase n=2 Tax=Leptospira b... 254 2e-66 UniRef50_Q72ES3 DNA polymerase I n=3 Tax=Desulfovibrio vulgaris ... 253 3e-66 UniRef50_A7ILD7 5'-3' exonuclease n=1 Tax=Xanthobacter autotroph... 253 4e-66 UniRef50_C3WHF0 DNA polymerase I n=3 Tax=Fusobacterium RepID=C3W... 253 4e-66 UniRef50_B8IZN9 DNA polymerase I n=1 Tax=Desulfovibrio desulfuri... 253 4e-66 UniRef50_P54161 5'-3' exonuclease n=31 Tax=Bacillales RepID=EX53... 252 7e-66 UniRef50_C8PHS8 DNA polymerase I n=2 Tax=Campylobacter RepID=C8P... 252 7e-66 UniRef50_Q8K9D0 5'-3' exonuclease n=4 Tax=Buchnera aphidicola Re... 252 9e-66 UniRef50_C7LZ56 DNA polymerase I n=1 Tax=Acidimicrobium ferrooxi... 251 1e-65 UniRef50_C3U0N4 DNA polymerase I n=1 Tax=uncultured bacterium Re... 251 2e-65 UniRef50_UPI0001978038 DNA polymerase I n=1 Tax=Helicobacter cin... 251 2e-65 UniRef50_C3XEZ4 DNA polymerase I n=3 Tax=Bacteria RepID=C3XEZ4_9... 250 3e-65 UniRef50_C7N982 DNA polymerase I n=6 Tax=Leptotrichia RepID=C7N9... 248 9e-65 UniRef50_Q4UR88 Exodeoxyribonuclease IX n=14 Tax=Bacteria RepID=... 248 1e-64 UniRef50_B5FAT7 Uncharacterized exonuclease xni n=138 Tax=Gammap... 248 2e-64 UniRef50_Q7VRJ4 DNA polymerase I n=3 Tax=Enterobacteriaceae RepI... 247 2e-64 UniRef50_UPI00016C3887 DNA polymerase I n=1 Tax=Gemmata obscurig... 246 4e-64 UniRef50_B3DZC7 5'-3' exonuclease n=1 Tax=Methylacidiphilum infe... 246 6e-64 UniRef50_B5RMA2 DNA polymerase I n=2 Tax=Borrelia RepID=B5RMA2_B... 246 6e-64 UniRef50_C5BR48 5'-3' exonuclease n=1 Tax=Teredinibacter turnera... 246 6e-64 UniRef50_UPI0000DAED41 hypothetical protein Wendoof_01000149 n=1... 245 9e-64 UniRef50_B5JW38 Exodeoxyribonuclease IX n=1 Tax=gamma proteobact... 245 1e-63 UniRef50_Q9PQ75 5'-3' exonuclease n=15 Tax=Ureaplasma RepID=EX53... 245 1e-63 UniRef50_A8FKC7 DNA polymerase I n=20 Tax=Campylobacter RepID=A8... 245 1e-63 UniRef50_A1QZY0 DNA polymerase I n=1 Tax=Borrelia turicatae 91E1... 244 2e-63 UniRef50_A5IXV4 DNA polymerase I: 5' 3' exonuclease domain n=7 T... 244 3e-63 UniRef50_Q7VGK4 DNA polymerase I n=8 Tax=Campylobacterales RepID... 243 6e-63 UniRef50_O51498 DNA polymerase I n=20 Tax=Borrelia RepID=DPO1_BORBU 242 7e-63 UniRef50_B4D756 5'-3' exonuclease n=1 Tax=Chthoniobacter flavus ... 242 7e-63 UniRef50_B8GPC5 5'-3' exonuclease n=1 Tax=Thioalkalivibrio sp. H... 241 1e-62 UniRef50_B5YDJ0 DNA polymerase I n=3 Tax=Dictyoglomus RepID=B5YD... 241 1e-62 UniRef50_B1ZX82 5'-3' exonuclease n=3 Tax=Verrucomicrobia RepID=... 241 1e-62 UniRef50_Q8I7W9 Mitochondrial DNA polymerase A n=2 Tax=Eukaryota... 241 2e-62 UniRef50_B1HWJ8 Probable 5'-3' exonuclease n=2 Tax=Bacillaceae R... 241 2e-62 UniRef50_B2KCD2 DNA polymerase I n=1 Tax=Elusimicrobium minutum ... 240 3e-62 UniRef50_C1SHV2 DNA polymerase I n=1 Tax=Denitrovibrio acetiphil... 239 5e-62 UniRef50_D1AV04 DNA polymerase I n=1 Tax=Streptobacillus monilif... 239 9e-62 UniRef50_A2SN70 DNA polymerase I n=1 Tax=Methylibium petroleiphi... 238 1e-61 UniRef50_A0KHE3 Uncharacterized exonuclease xni n=3 Tax=Aeromona... 238 2e-61 UniRef50_D0KVP7 5'-3' exonuclease, N-terminal resolvase-like dom... 238 2e-61 UniRef50_Q1N615 Exonuclease IX n=1 Tax=Bermanella marisrubri Rep... 238 2e-61 Sequences not found previously or not previously below threshold: >UniRef50_B9M4P2 DNA polymerase I n=3 Tax=Deltaproteobacteria RepID=B9M4P2_GEOSF Length = 891 Score = 322 bits (825), Expect = 9e-87, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 13/258 (5%) Query: 1 MAVH--LLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVF 49 M L ++D + I R + + + L +++ +P H VF Sbjct: 1 MPEKPKLYLIDGSSYIYRAYYAIRHLSSPKGFPTNALYGFIQMLLKVVKDRKPDHLAVVF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +R++ P YKA R MP++L ++ ++ A +P G EADD+ T Sbjct: 61 DAGKLT--FRNEIYPAYKANRSAMPDDLRLQIEPIKEAVRAFRIPVLELPGFEADDIIGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 +A + G A IV+ DK Q+++ ++ + D + + + + FGV P+++ D Sbjct: 119 IACDCEKKGMAAVIVTGDKDLMQIVTDSVTLLDTMKDKASGPAEVVERFGVPPERVVDIL 178 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 LAG SS +PG+ GIG K+A +L+ E SL+ + EN V K ++L + A L R Sbjct: 179 ALAGDSSDNIPGIPGIGEKTAIKLIQEHHSLDQLLENASVVKGKVGERLREFADQARLSR 238 Query: 230 DIARLQTDLHIDGNLQQL 247 +A ++ ++ + + Sbjct: 239 RLATIECNVPVPYSYGDF 256 >UniRef50_A1ASW3 DNA polymerase I n=12 Tax=Deltaproteobacteria RepID=A1ASW3_PELPD Length = 893 Score = 322 bits (825), Expect = 1e-86, Method: Composition-based stats. Identities = 75/258 (29%), Positives = 128/258 (49%), Gaps = 13/258 (5%) Query: 1 MA--VHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVF 49 M+ L +VD + I R + + + L +L+ QP H VF Sbjct: 1 MSHDDTLYLVDGSSYIYRAYYAIRHLSSPTGHPTNTIYGFTQMLLKLLKEHQPRHVAVVF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +R + PDYKA R +P++L +M +R +P +G EADD+ Sbjct: 61 DVGRET--FRTELYPDYKANRAALPDDLRVQMGPIRDLVRAFNIPALELAGFEADDIIGC 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 LA + + G + IV+ DK Q+++ + + D +++ + + FGV+P+ + D Sbjct: 119 LAARFSATGGRVVIVTGDKDLMQIVTERVTLLDTMKEKRSAITDVIERFGVEPRLVTDIL 178 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 GLAG +S +PGV GIG K+A +L+ E+ SL+ + E V K +KL ++ A L R Sbjct: 179 GLAGDASDNIPGVPGIGEKTAMKLIREYGSLDQLLERASEVKGKNGEKLREFRDQALLSR 238 Query: 230 DIARLQTDLHIDGNLQQL 247 +A ++ D+ I L++L Sbjct: 239 RLATIRCDVPIQVELEEL 256 >UniRef50_Q04957 DNA polymerase I n=117 Tax=Firmicutes RepID=DPO1_BACCA Length = 877 Score = 316 bits (811), Expect = 4e-85, Method: Composition-based stats. Identities = 70/264 (26%), Positives = 127/264 (48%), Gaps = 16/264 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L+++D ++ R + V L++++ +PTH + FD Sbjct: 1 MKKKLVLIDGSSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEEPTHMLVAFDA 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH+ +YK GR P EL ++ P LR +P + EADD+ TLA Sbjct: 61 GKTT--FRHEAFQEYKGGRQQTPPELSEQFPLLRELLRAYRIPAYELENYEADDIIGTLA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 + Q G + ++S D+ QL SP + + + + +++G+ P+Q+ D Sbjct: 119 ARAEQEGFEVKVISGDRDLTQLASPHVTVDITKKGITDIEPYTPEAVREKYGLTPEQIVD 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAF 226 GL G S +PGV GIG K+A +LL +F ++E + ++D + K ++ L H+EMA Sbjct: 179 LKGLMGDKSDNIPGVPGIGEKTAVKLLRQFGTVENVLASIDEIKGEKLKETLRQHREMAL 238 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 L + +A ++ D ++ +L + Sbjct: 239 LSKKLAAIRRDAPVELSLDDIAYQ 262 >UniRef50_B8D217 DNA polymerase I n=1 Tax=Halothermothrix orenii H 168 RepID=B8D217_HALOH Length = 870 Score = 315 bits (809), Expect = 7e-85, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 16/265 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L ++D +L R + V L +L+ +P FD Sbjct: 1 MKKKLYLLDGQSLAHRAFYALPLLSTSRGEYTNAVFGFTRMLLKLLDEEKPDLIAVAFD- 59 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ +RH+ +YKA R MPEEL ++ ++ + +P G EADD+ T+A Sbjct: 60 -KKAPTFRHKEYKEYKAHRKKMPEELKPQLSLIKEVLKSFSIPIIEIEGFEADDIIGTMA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLPD 167 K + G + IV+ D+ QL++ + + + D + + + ++PQQL D Sbjct: 119 RKGEEEGFEVVIVTGDRDALQLVTEDVSVMYTKRGISDIVRYDLNKVRERYELEPQQLID 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR-KKLETHKEMAF 226 GL G SS +PGV GIG K+A +LL EF SLE I +N+D V+ K R + L+ + + A Sbjct: 179 MKGLMGDSSDNIPGVPGIGEKTAIKLLKEFSSLEEILDNIDKVSGKKRKENLQKYADQAR 238 Query: 227 LCRDIARLQTDLHIDGNLQQLRLVR 251 L + + ++ D+ +D L + L + Sbjct: 239 LSKRLGEIKVDVPLDVELDECHLGK 263 >UniRef50_A6FZM5 DNA polymerase I n=2 Tax=Deltaproteobacteria RepID=A6FZM5_9DELT Length = 898 Score = 314 bits (806), Expect = 2e-84, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 130/259 (50%), Gaps = 12/259 (4%) Query: 2 AVHLLIVDALNLIRRIHAVQG----------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 L+++DA +LI R + + + +++ QP VFD Sbjct: 4 PERLILIDASSLIYRAYYAIPANFSTADGLHTNAIYGFATMFRKILSGRQPERGAVVFDA 63 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ +R ++ P+YKA RP M EL +++P + E P G EADD+ TL Sbjct: 64 PGKT--FREEQYPEYKAQRPRMDPELREQLPWVDKLVEAHRFPHLRVPGYEADDIIGTLT 121 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + AG + I+S DK + QL+ PT+R+ D + DA + K++GV P DY L Sbjct: 122 RQAVDAGMEVYIISGDKDFAQLIGPTVRMIDTLRDVTFDAELVRKKWGVPPSLFIDYLAL 181 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G +PGV GIGPK+A +LL + LEG+ + + K +++LE + E A + + + Sbjct: 182 VGDKVDNIPGVPGIGPKTAKKLLDAYGDLEGVLTHTSELKGKQKERLEDNAEQARMSQKL 241 Query: 232 ARLQTDLHIDGNLQQLRLV 250 A + T + ++ L+ L+LV Sbjct: 242 ATIDTQVELELGLEDLKLV 260 >UniRef50_B3TC83 Putative DNA polymerase family A n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC83_9ZZZZ Length = 891 Score = 313 bits (803), Expect = 3e-84, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 13/260 (5%) Query: 2 AVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L ++D N + R + + V L +L+ QP A FD + Sbjct: 4 TPRLFLIDGNNQMYRAYHALHGLTGPDGRSTNAVYGFITMLRKLLSDQQPDLVAAAFDLK 63 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH+ DYKA R PMPE+L +++ + A GVP + +G EADD+ TLA Sbjct: 64 GPT--FRHELAADYKATRRPMPEDLVEQVSWVHEACAALGVPVVTHAGFEADDVIGTLAT 121 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYF-QKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + AG + +V+ DK + QL+ +R+ + + W D + ++FGV+P Q+ D L Sbjct: 122 QAVAAGLEVVVVTGDKDFFQLVGDRIRVFNPRDEGAWYDDAGVLEKFGVRPDQVVDVLAL 181 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRD 230 G +S V GV GIG K A +LL +F SL+ + ++ D + +K+R L H + A R+ Sbjct: 182 MGDASDNVKGVPGIGEKGARELLADFGSLDWLLDHADELPKKKYRTALTEHADNARRSRE 241 Query: 231 IARLQTDLHIDGNLQQLRLV 250 + RL TD+ + ++ R Sbjct: 242 LVRLVTDVPVPYEPERYRYR 261 >UniRef50_A0LCQ8 DNA polymerase I n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LCQ8_MAGSM Length = 911 Score = 310 bits (796), Expect = 2e-83, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 123/260 (47%), Gaps = 12/260 (4%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L ++D + R + + L ++I +P FD Sbjct: 3 TQRLFLIDGSGYLYRAFFGVRNLTRRDGFPTNAIFGFIKMLRKVIEDEKPDFVTIAFD-- 60 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +RH YKA R PMP+EL ++P + + +P + G EADD+ T A Sbjct: 61 TKAPTFRHTMDAQYKANRKPMPDELRVQIPVIHDVIDAFNIPRIALEGYEADDIIGTFAR 120 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 AG + +VS DK QL++P +++ D + +W + + +GV +++PD GLA Sbjct: 121 LGCAAGVEVVVVSGDKDLMQLITPQVKMFDGSKDKWYGPEDVVESWGVAAERIPDLLGLA 180 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLCRDI 231 G +S +PGV GIGPK+A QL+ EF SLEG+ + + K R L + A + Sbjct: 181 GDTSDNIPGVGGIGPKTAAQLIAEFGSLEGVLHGAERIKQPKRRTALLEQADTARRSLQL 240 Query: 232 ARLQTDLHIDGNLQQLRLVR 251 A + ++ + +LQ R+ R Sbjct: 241 ATINREVPLPFDLQGARMQR 260 >UniRef50_A5GAH5 Ribonuclease H n=6 Tax=Desulfuromonadales RepID=A5GAH5_GEOUR Length = 484 Score = 310 bits (795), Expect = 3e-83, Method: Composition-based stats. Identities = 77/257 (29%), Positives = 124/257 (48%), Gaps = 11/257 (4%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 A L ++D + I R + + V L L+ ++P + V D Sbjct: 4 APQLYVLDGSSYIYRAYYGVRDLATSGGMPTNAVFGFTRMLLGLLQENRPDYLAVVLDPP 63 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 R +R + P YKA R MP +L ++P +R + +P G EADD+ ATLA Sbjct: 64 -REETFRRELYPAYKAHRDAMPADLVPQLPYIRQILQALNIPALEAPGFEADDVIATLAR 122 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 + G + T+V+ DK Q++ + + D + + FGV P+ +PD GLA Sbjct: 123 RYAAEGIEVTVVTGDKDLLQIVGDGINLLDTMKDLRSGPQEVLDRFGVPPELVPDVLGLA 182 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW-RKKLETHKEMAFLCRDI 231 G +S +PGV GIG K+A +L+ F SLEG+ + V K R+ L H + A L + + Sbjct: 183 GDTSDNIPGVPGIGEKTAAELVRRFGSLEGVLQWKSLVNGKQRRENLHAHADQARLSKTL 242 Query: 232 ARLQTDLHIDGNLQQLR 248 A ++ D+ +D +L +L Sbjct: 243 ATVRYDVPLDLSLAELE 259 >UniRef50_Q2LQV1 DNA polymerase I n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQV1_SYNAS Length = 901 Score = 308 bits (790), Expect = 1e-82, Method: Composition-based stats. Identities = 79/259 (30%), Positives = 127/259 (49%), Gaps = 12/259 (4%) Query: 2 AVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 + +VD N + R + V + L +L+ +P + FD + Sbjct: 12 KSTIYLVDGSNYLYRAFYAIRELSNSRGLPTNAVYGFTNMLIKLLRERKPEYIAITFDLK 71 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH+ YKA R PE L ++P ++ +P G EADD+ TLA Sbjct: 72 GPT--FRHETYAQYKATRKATPEALIPQIPYIKDIIRGFSIPILEQQGTEADDIIGTLAC 129 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 + G + IVS DK QLLSP + + D R D + + FGV P+++P+ GL Sbjct: 130 RFAGEGLKVIIVSGDKDMLQLLSPDVIMIDTMNDRTYDVAAVRERFGVDPEKVPEILGLT 189 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDI 231 G S +PG+ GIGPK A +L+ E+ S+E I N++ + K R + + E A L RD+ Sbjct: 190 GDMSDNIPGIPGIGPKGALRLVEEYGSIEEILRNVERLRNPKLRDSVRVYGEQALLSRDL 249 Query: 232 ARLQTDLHIDGNLQQLRLV 250 AR++T + + +L++ RL Sbjct: 250 ARIRTGIPLTFDLEEARLQ 268 >UniRef50_Q6MPP6 DNA polymerase I n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPP6_BDEBA Length = 863 Score = 307 bits (788), Expect = 2e-82, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 12/258 (4%) Query: 3 VHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + ++D + R V + +L+ +P + V +D Sbjct: 2 KKIYLIDVSAMFFRAFYAIRALSSPSGVPVNAVYGFLSMMIKLLKEEKPEYLVFCYD--R 59 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +R YKA R MP+EL ++P ++ + GVP + EADD+ TL Sbjct: 60 KEPSFRKTMYDGYKAHRTEMPDELAQQIPYIKRLADLLGVPAFEVESFEADDIIGTLTKW 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 + G + IVS DK + QL+ + + D + +A + +++GV+P Q DY + G Sbjct: 120 SRRNGMEVFIVSGDKDFGQLIEDGVTLYDTMKGVRYNAEGVFEKWGVRPDQFIDYLAIVG 179 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHKEMAFLCRDIA 232 +S VPGV G+G K A +LL +F+ +E IYEN+D V K R+KL K+ A L + + Sbjct: 180 DASDNVPGVKGVGEKGAIKLLEQFKHVEDIYENIDKVESKSVREKLIASKDNALLSKKLV 239 Query: 233 RLQTDLHIDGNLQQLRLV 250 + D+ + +L+ +L Sbjct: 240 TISCDVPMPDDLEAYKLK 257 >UniRef50_B6IUP1 DNA polymerase I, putative n=2 Tax=Alphaproteobacteria RepID=B6IUP1_RHOCS Length = 987 Score = 307 bits (787), Expect = 2e-82, Method: Composition-based stats. Identities = 81/259 (31%), Positives = 128/259 (49%), Gaps = 12/259 (4%) Query: 2 AVHLLIVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDE 52 L +VD I R + G+P V + L +L+ + +FD + Sbjct: 33 PEALYLVDGSGFIFRAYHALPPLNRPDGTPVNAVLGFTNMLMKLLAELKAEAVAVIFDAK 92 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +R++ PDYKA RP PE+L + +R A + +PC G EADDL AT A Sbjct: 93 R--LNFRNEFYPDYKANRPEPPEDLRPQFAIIREAVDAFCLPCLELEGYEADDLIATYAR 150 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 + G T+VS+DK QL+ +R+ D + R + + ++FGV P+++ D LA Sbjct: 151 LAREQGRPVTVVSSDKDLMQLVRDGVRLMDPMKGRLIGPEEVAEKFGVPPEKVVDVQALA 210 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDI 231 G S VPGV GIG K+A QL+ E+ LE + E + + R+KL + E+A + + + Sbjct: 211 GDSVDNVPGVPGIGVKTAAQLITEYGDLETLLERAGEIRQAGRRQKLLENAELARISKRL 270 Query: 232 ARLQTDLHIDGNLQQLRLV 250 RL + + L +LR+ Sbjct: 271 VRLDDAVPVPVPLDRLRVR 289 >UniRef50_Q6X9S0 DNA polymerase I n=3 Tax=Bacillales RepID=Q6X9S0_9BACL Length = 903 Score = 307 bits (787), Expect = 2e-82, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 15/259 (5%) Query: 4 HLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 L++VD ++ R + V + L +LI +PTH + FD Sbjct: 3 KLILVDGNSVANRAFYAVRLLSTRGGLHTNAVYGFANMLLKLIEEERPTHFLVAFDAGKA 62 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + +RH+ YKAGR P EL ++ P +R GV EADD+ TLA + Sbjct: 63 T--FRHREYEAYKAGRLQTPPELSEQFPYIRELVRAFGVASGELEEYEADDMIGTLAKRA 120 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYWG 170 G +V+ D+ QL+S + + + D I +E+G P ++ D G Sbjct: 121 EAEGVDTLVVTGDRDLLQLVSDRVTVALTRKGITETERYDPARIREEYGFDPDRIRDLKG 180 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G +S +PGV G+G K+A +LL ++ SLE + E+ +A K + L H + A L + Sbjct: 181 LMGDASDNLPGVPGVGEKTALKLLRQYGSLESVLEHASEIAGKLGENLRAHADAARLSKR 240 Query: 231 IARLQTDLHIDGNLQQLRL 249 +A + + + LRL Sbjct: 241 LATIDCAVPLQSGWDWLRL 259 >UniRef50_B0KAJ0 DNA polymerase I n=12 Tax=Thermoanaerobacterales RepID=B0KAJ0_THEP3 Length = 872 Score = 307 bits (786), Expect = 3e-82, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 129/263 (49%), Gaps = 16/263 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ L++D +L+ R + + + L +LI +P + FD Sbjct: 1 MS-KFLVIDGSSLMYRAYYALPMLTTSEGLHTNALYGFTMMLIKLIEEEKPDYIAIAFD- 58 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ +RH+ DYKA R MPEEL +++ L+ E + G EADD+ T++ Sbjct: 59 -KKAPTFRHKEYQDYKATRQAMPEELAEQVDLLKEIIEGFNIKILELEGYEADDIIGTIS 117 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 + + +V+ D+ QL+S ++++ + D + + + + P Q D Sbjct: 118 KLAEEKEMEVLVVTGDRDALQLVSDKVKVKISKKGITQMEEFDEKAVLERYEITPHQFID 177 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 GL G S +PG+ IG K+A +LL +F ++E + +NL + K ++ +E +KE+A + Sbjct: 178 LKGLMGDKSDNIPGIPNIGEKTAIKLLKDFGTIENLLQNLSQLKGKIKENIENNKELAIM 237 Query: 228 CRDIARLQTDLHIDGNLQQLRLV 250 + +A ++ D+ I+ + ++ R+ Sbjct: 238 SKKLATIKRDIPIEIDFEEYRVK 260 >UniRef50_Q0AVE2 DNA polymerase I n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVE2_SYNWW Length = 866 Score = 306 bits (784), Expect = 6e-82, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 130/261 (49%), Gaps = 16/261 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 MA +++D +L+ R + V ++++ QPTH FD Sbjct: 1 MADKFILIDGNSLLYRAFYALPLLHNSAGVYTNGVYGFLTMFNRVLAEIQPTHIAVAFDK 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + + +R++ +YKA R PEEL + LR + G EADD+ TL+ Sbjct: 61 DRST--FRNELYSEYKANRSAPPEELGGQFQLLRDVLAALNIEYLEMQGYEADDIIGTLS 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 K + G + I++ D QL+S + + + D + ++GV+P+++ + Sbjct: 119 KKAEEQGLKTVILTGDGDALQLVSEQVEVLLTKKGISEMELYDPQGVKDKWGVEPEKMVE 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAF 226 GL G +S +PGV G+GPK+A +L+ EF SLE +YENL V +K +KLE ++E AF Sbjct: 179 IKGLMGDASDNIPGVPGVGPKTAMKLVQEFTSLENLYENLPQVKGKKLVEKLEQNREQAF 238 Query: 227 LCRDIARLQTDLHIDGNLQQL 247 L R +A + D+ +D +++ Sbjct: 239 LSRQLATINRDMELDFSIEDY 259 >UniRef50_C7MNN5 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID=C7MNN5_CRYCD Length = 885 Score = 305 bits (781), Expect = 1e-81, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 131/263 (49%), Gaps = 16/263 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 M + ++D +L+ R + + V + I + P V FD Sbjct: 1 MPKTIAVIDGNSLMHRAYHAVPPTMNAPDGTPTNAVFGFLSMFLKFIDIAHPDAVVCAFD 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 R L YKA RPPM ++L + P + G+P G E DD+ T+ Sbjct: 61 VGK--PQHRIAALEQYKAQRPPMDDDLRVQFPVVEQVLAAMGIPAVKVPGWEGDDILGTI 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLP 166 A + AG+ +V+ DK CQL S RI + + D +++++GV P+Q+P Sbjct: 119 AARGDAAGYDTLLVTGDKDACQLASDHTRIVNTKRGISDVVIFDPAGVEEKYGVSPEQIP 178 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D+ GL G SS +PGV GIGPK+A +LL F S+EGIYE+LD + K ++ + +++ AF Sbjct: 179 DFLGLMGDSSDNIPGVPGIGPKTAAKLLQRFGSIEGIYEHLDELKGKQQESIRDNRDAAF 238 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 L RD+A ++ DL + +L+ L Sbjct: 239 LSRDVAIIKCDLDFELDLENLTF 261 >UniRef50_Q3ABL3 DNA polymerase I n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABL3_CARHZ Length = 831 Score = 303 bits (778), Expect = 2e-81, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 121/260 (46%), Gaps = 15/260 (5%) Query: 4 HLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 +++VD +L+ R + + V L ++I +P + FD + Sbjct: 3 KVVLVDGNSLLHRAFFALPPLKTTKGEPTGAVYGFLTMLFRVIKDEKPEYLAVAFDISRK 62 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + +R ++ YK R P+EL + +R + VP G EADD+ L+ Sbjct: 63 T--FRTEQFTAYKGHRKEAPDELVPQFALVREVLKVLNVPYIELDGYEADDIIGHLSRAF 120 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW----LDAPFIDKEFGVQPQQLPDYWG 170 GH+ I + D+ QL+ + + +D I + +G++P+QL D G Sbjct: 121 AGQGHEVVIYTADRDMLQLVDEKTVVYLTKKGITELVKMDLAAILENYGLKPKQLVDVKG 180 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G S +PGV GIG K+A L+ + S+E + + D + K R+KL H+ +A + + Sbjct: 181 LMGDPSDNIPGVPGIGEKTALDLIKTYGSVEEVLAHKDELKPKLREKLAEHENLAKISKQ 240 Query: 231 IARLQTDLHIDGNLQQLRLV 250 +A + ++ ++ +L+ L++ Sbjct: 241 LATILREIPLEISLEDLKVK 260 >UniRef50_C8W0H1 DNA polymerase I n=2 Tax=Clostridia RepID=C8W0H1_DESAS Length = 888 Score = 303 bits (777), Expect = 3e-81, Method: Composition-based stats. Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 15/258 (5%) Query: 3 VHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 +L++D +LI R + V + L +++ QP FD Sbjct: 12 NTILVIDGNSLIHRAFHAIPLLSTADGLPTNAVYGFTNMLLKILNDIQPKWVTVAFDKSK 71 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +R+Q +YKA R PEEL + ++ + G EADDL T+ K Sbjct: 72 TT--FRNQEYSEYKAHRKATPEELRPQFSLVKDVLNALSIKWLEAEGYEADDLIGTIVKK 129 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 + I+S DK QL+S R + +A + ++FGV P Q+ DY Sbjct: 130 AEEEDADVVILSGDKDILQLVSDKTRAILTKKGITEIEEYNAENVYRKFGVHPNQITDYK 189 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 GL G S +PGV GIGPK+AT+LL +F S+E I NLD + + R +E + E A L + Sbjct: 190 GLTGDPSDNIPGVPGIGPKTATKLLQDFDSVENILANLDKITSRARTLMENNSEQALLSK 249 Query: 230 DIARLQTDLHIDGNLQQL 247 +A + T++ + L+Q Sbjct: 250 RLATIITNVPVQITLEQC 267 >UniRef50_Q6X9Q9 DNA polymerase I n=1 Tax=Spirochaeta thermophila RepID=Q6X9Q9_9SPIO Length = 897 Score = 302 bits (775), Expect = 5e-81, Method: Composition-based stats. Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 15/259 (5%) Query: 3 VHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 L ++DA LI R + + + + L + + P + V D Sbjct: 2 KPLFLIDAYGLIYRAYFALIRAPMRTKDGRNTSAIYGFFRMLFRFVKEYDPVYCGVVLDS 61 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +R + YKA R PE+LH ++P + E G +G EADD+ TLA Sbjct: 62 --LTPTFREKTFEAYKATRQKTPEDLHPQIPVIEEILEALGFATVRMNGFEADDVMGTLA 119 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL--DAPFIDKEFGVQPQQLPDYW 169 G +VS DK QL++ ++I + ++ D + +++GV+ Q+ D+ Sbjct: 120 AMAQAEGRPCFVVSGDKDLAQLVTKGVKIVRMDKDDFVVLDEEGVKEKWGVRADQIVDFL 179 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G +S +PGV GIG K+A +LL E+ SLEG+Y +LD ++ R+KLE +E AFL R Sbjct: 180 ALVGDASDNIPGVEGIGEKTAQRLLAEYGSLEGVYAHLDELSPSLRRKLEEGRERAFLSR 239 Query: 230 DIARLQTDLHIDGNLQQLR 248 D+A ++TDL + + LR Sbjct: 240 DLATIRTDLDLSLTIGDLR 258 >UniRef50_Q59156 DNA polymerase I n=6 Tax=Clostridia RepID=DPO1_ANATD Length = 850 Score = 302 bits (774), Expect = 7e-81, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 123/263 (46%), Gaps = 17/263 (6%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + L+I D +++ R + + + + + + +P + FD Sbjct: 1 MKLVIFDGNSILYRAFFALPELTTSNNIPTNAIYGFVNVILKYLEQEKPDYVAVAFD--K 58 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 R R +YKA R PMP+ L ++P +R +P G EADD+ +L + Sbjct: 59 RGREARKSEYEEYKANRKPMPDNLQVQIPYVREILYAFNIPIIEFEGYEADDVIGSLVNQ 118 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------RWLDAPFIDKEFGVQPQQLPD 167 G I++ D+ QLL + ++ K + +++GV Q+PD Sbjct: 119 FKNTGLDIVIITGDRDTLQLLDKNVVVKIVSTKFDKTVEDLYTVENVKEKYGVWANQVPD 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 Y L G S +PGV GIG KSA +LL E+ SLE IY+NLD + R+KLE K+MAFL Sbjct: 179 YKALVGDQSDNIPGVKGIGEKSAQKLLEEYSSLEEIYQNLDKIKSSIREKLEAGKDMAFL 238 Query: 228 CRDIARLQTDLHIDGNLQQLRLV 250 + +A + DL ++ L+ LR Sbjct: 239 SKRLATIVCDLPLNVKLEDLRTK 261 >UniRef50_C4Z982 DNA polymerase I n=2 Tax=Clostridiales RepID=C4Z982_EUBR3 Length = 903 Score = 302 bits (773), Expect = 9e-81, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 124/265 (46%), Gaps = 18/265 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ L+++D +++ R + + V + + +++ +P + FD Sbjct: 1 MSEKLVLIDGHSILNRAYHGLPDLTNSEGLHTNAVYGFLNIMFKILDEEKPDYLTVAFDV 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH+ YK R PM EEL ++P ++ G+ G EADD+ TL+ Sbjct: 61 --HAPTFRHRMFDAYKGTRKPMDEELRQQVPMIKEMLTAMGIKIVEKEGYEADDILGTLS 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW------LDAPFIDKEFGVQPQQL 165 V+ +AG I+S D+ QL + + +R K+ + + +++GV P++ Sbjct: 119 VRAEKAGMDVAIISGDRDLLQLATDHVMVRIPKTKKTGTEIENYNTADVIEKYGVTPKEF 178 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR-KKLETHKEM 224 D L G +S +PGV GIG K+A L+ ++ +E ++E+ + V K + + E Sbjct: 179 IDVKALQGDTSDNIPGVPGIGEKTAGALIAKYHCIEAVHEDAENVKPPRASKNIVEYWEQ 238 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 A + +++A + D +D +L Sbjct: 239 ALMSKELATIILDAPVDYEFSDAKL 263 >UniRef50_D0XR83 DNA polymerase I n=2 Tax=Alphaproteobacteria RepID=D0XR83_9CAUL Length = 994 Score = 302 bits (773), Expect = 1e-80, Method: Composition-based stats. Identities = 88/264 (33%), Positives = 127/264 (48%), Gaps = 17/264 (6%) Query: 2 AVHLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMHSQ----PTHAVA 47 AV L ++DA I R + G P V+ + L +L+ + PTH A Sbjct: 44 AVRLWLIDASAYIFRAYHALPPLTRKSDGLPVGAVQGYCNMLWKLLKDMKGADGPTHLAA 103 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 +FD ++ +R+ YKA R PE+L + P +R A GV C G EADDL Sbjct: 104 IFDHSEKT--FRNALYDQYKANRSAPPEDLVPQFPLVRDATRAFGVHCVELPGYEADDLI 161 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPD 167 AT A KV AG + IVS+DK QL+ P++ + D + R L + ++FGV P ++ D Sbjct: 162 ATYACKVRDAGGECVIVSSDKDLMQLIGPSVVMWDPMKDRRLAEDAVMEKFGVTPDKMID 221 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAF 226 L G S VPG GIGPK+A QLL E+ L+ + E + K R+ L ++ Sbjct: 222 LQALIGDSVDNVPGAPGIGPKTAAQLLDEYGDLDTLLERAGEIKQPKRRETLINFRDQIL 281 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 L R + RL D + R+ Sbjct: 282 LSRQLVRLTCDAPAPEPIDDFRVR 305 >UniRef50_Q1QDQ1 DNA polymerase I n=24 Tax=cellular organisms RepID=Q1QDQ1_PSYCK Length = 988 Score = 302 bits (773), Expect = 1e-80, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 12/256 (4%) Query: 4 HLLIVDALNLIRRIHAVQG----------SPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 ++VD + R + + + +AL +L+ PTH FD Sbjct: 40 PFILVDGSYYLFRTYHALPKTMQNSQGLVTNAIRGTLNALLKLMRRYHPTHMAVCFD--T 97 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +S +RH +YKA RP M EL +++P + G+P G EADD+ TLA + Sbjct: 98 KSPTFRHAMSEEYKANRPKMDIELAEQIPYIHRLVTALGIPLLRIEGAEADDIIGTLAYR 157 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 GH I + DK QL++ + + D F + D+ + ++FG+ P+Q+ D+ L G Sbjct: 158 AVAEGHHVVISTGDKDMMQLINDCVILEDSFTGKMTDSAGVVEKFGINPEQMIDFLTLMG 217 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR 233 SS + GV GIG K+A LL E+ +++ + +N+ + + K L + + + +A Sbjct: 218 DSSDGIKGVPGIGKKTAKDLLNEYGNIDNMLKNVANIKGRAGKNLLEYADDIPMNAQLAT 277 Query: 234 LQTDLHIDGNLQQLRL 249 + TDL + + Q L++ Sbjct: 278 IVTDLEVGQDWQDLKI 293 >UniRef50_B8H5J7 DNA polymerase I n=23 Tax=Alphaproteobacteria RepID=B8H5J7_CAUCN Length = 982 Score = 301 bits (772), Expect = 1e-80, Method: Composition-based stats. Identities = 80/263 (30%), Positives = 122/263 (46%), Gaps = 16/263 (6%) Query: 2 AVHLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMHSQ---PTHAVAV 48 AV L +VD + R + G P V+ + L +L+ Q PTH + Sbjct: 40 AVRLFLVDGSAYLFRAYHALPPLTRKSDGLPVGAVQGFCNMLWKLLRDMQGDTPTHLAVI 99 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 +D ++ +R+ YKA RPP PE+L + P +R A GVP G EADDL A Sbjct: 100 WDHSEKT--FRNALYDQYKAHRPPPPEDLIPQFPLVREATLAFGVPAIELPGYEADDLIA 157 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 A K G +A IVS+DK QL+ + + D + ++ + ++FGV P+++ D Sbjct: 158 AYACKARDIGGEAIIVSSDKDLMQLVGDGVSMYDPMKGVRIEREQVFEKFGVYPEKVVDV 217 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFL 227 L G S VPG GIG K+A QL+ E+ L+ + + K R+ L + L Sbjct: 218 QALCGDSVDNVPGAPGIGIKTAAQLITEYGDLDTLLARAGEIKQPKRRETLINFADQIRL 277 Query: 228 CRDIARLQTDLHIDGNLQQLRLV 250 R + +L D + L L + Sbjct: 278 SRALVKLDCDTPLPQPLDALTVR 300 >UniRef50_Q0F0N6 DNA polymerase I n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0N6_9PROT Length = 917 Score = 301 bits (771), Expect = 2e-80, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 14/261 (5%) Query: 1 MAVHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 M HL+++D N + R + + V L ++ PTH FD Sbjct: 1 MP-HLVLIDGPNYVFRAFHAVRHNLTNSKGEPTNAVFGYVQMLRSILKELGPTHVAVAFD 59 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + + +R++ DYKA RPPMPE+L + P++ + + EADD+ ATL Sbjct: 60 PKGGT--FRNRMYADYKAHRPPMPEDLAAQWPSIFDVTDAFRLNRICVEDYEADDVIATL 117 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 A + G +IVSTDK QL+ + + D +++ + + +GV P ++ D Sbjct: 118 ARQAEARGWDVSIVSTDKDLMQLVGERIWMLDTMKRKDYGPEEVKERWGVGPDRIQDLLA 177 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLCR 229 LAG S+ +PGV GIGPK+A LL + LEG+ + +K R+ L + A L Sbjct: 178 LAGDSADNIPGVPGIGPKTAVTLLEAYGDLEGVLTRAGEIKQQKRRENLIEFADDARLSY 237 Query: 230 DIARLQTDLHIDGNLQQLRLV 250 + L + + L L + Sbjct: 238 RLVALDEQVPLPIELDDLAVT 258 >UniRef50_O34996 DNA polymerase I n=38 Tax=Bacteria RepID=DPO1_BACSU Length = 880 Score = 301 bits (771), Expect = 2e-80, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 16/262 (6%) Query: 3 VHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L++VD +L R + V L +++ +PTH + FD Sbjct: 5 KKLVLVDGNSLAYRAFFALPLLSNDKGVHTNAVYGFAMILMKMLEDEKPTHMLVAFDAGK 64 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH +YK GR P EL ++MP +R + + + EADD+ TLA Sbjct: 65 TT--FRHGTFKEYKGGRQKTPPELSEQMPFIRELLDAYQISRYELEQYEADDIIGTLAKS 122 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 + G + + S DK QL + + + + + +++G+ P+Q+ D Sbjct: 123 AEKDGFEVKVFSGDKDLTQLATDKTTVAITRKGITDVEFYTPEHVKEKYGLTPEQIIDMK 182 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLC 228 GL G SS +PGV G+G K+A +LL +F S+E + E++D V+ +K ++KLE K+ A + Sbjct: 183 GLMGDSSDNIPGVPGVGEKTAIKLLKQFDSVEKLLESIDEVSGKKLKEKLEEFKDQALMS 242 Query: 229 RDIARLQTDLHIDGNLQQLRLV 250 +++A + TD I+ ++ L Sbjct: 243 KELATIMTDAPIEVSVSGLEYQ 264 >UniRef50_B9KYZ1 DNA polymerase I n=4 Tax=Thermomicrobia (class) RepID=B9KYZ1_THERP Length = 917 Score = 300 bits (769), Expect = 3e-80, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 125/262 (47%), Gaps = 19/262 (7%) Query: 4 HLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L++VD L R + + + V L +++ +P + + FD Sbjct: 9 RLVLVDGHGLAYRAYHALPPTLATSAGEPTHVVFGFASMLLEVLNDFEPDYVIVCFDTGR 68 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +R Q +YKA RP P++L ++ +R + G+P + G EADDL TLA + Sbjct: 69 ---SFRQQLYEEYKAHRPETPDDLKHQLERIRQLLDALGIPIVTREGYEADDLIGTLAAR 125 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW-----LDAPFIDKEFGVQPQQLPDY 168 T G + IV+ D QL+ +R+ ++R+ D + + +G P++LP+Y Sbjct: 126 ATANGLEVLIVTGDTDLLQLVDEDVRVILPGRQRFGDYRVYDRQAVIERYGFPPERLPEY 185 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFL 227 L G S +PGV GIG K+AT+L+ F SLE + + +D V + R+ L +E Sbjct: 186 KALVGDPSDNIPGVPGIGEKTATRLIQRFSSLEEMLDRIDEVEPPRLREALRAARETVLA 245 Query: 228 CRDIARLQTDLHIDGNLQQLRL 249 R +A + D I +L+Q R Sbjct: 246 SRRLATIVRDADITLDLEQARF 267 >UniRef50_Q1NVM3 DNA polymerase A n=2 Tax=Deltaproteobacteria RepID=Q1NVM3_9DELT Length = 910 Score = 299 bits (767), Expect = 5e-80, Method: Composition-based stats. Identities = 86/260 (33%), Positives = 130/260 (50%), Gaps = 14/260 (5%) Query: 1 MAVH--LLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVF 49 M + ++D I R + + + L ++I + H VF Sbjct: 1 MKKPPPVYLIDGSAYIHRAYHAITPLTNRDGLPTHAIYGFTTTLLRVIREGEARHLAVVF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D R +RHQ P YKA RP MPE+L ++P ++ + G EADDL A Sbjct: 61 DA--RGPNFRHQLYPQYKANRPAMPEDLACQLPYIKEIVAAYRITSLEREGFEADDLIAA 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 ++ AGH+ IVS DK QL+ P + D R LDA ++ ++ + P +L DY+ Sbjct: 119 AGRRLAAAGHRVVIVSGDKDLLQLVGPNITFWDPMGDRLLDAAAVEAKYQLPPAKLLDYF 178 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLC 228 L G SS +PGV G+GPK+A +L+ EF L+ + NL+ V A K R+KL H++ A L Sbjct: 179 ALIGDSSDNIPGVPGVGPKTAVKLIKEFGDLDQLLANLEQVSAPKLRQKLADHRDAALLA 238 Query: 229 RDIARLQTDLHIDGNLQQLR 248 R++ RL+ DL I ++ R Sbjct: 239 RELIRLKDDLEIPATPEEYR 258 >UniRef50_C9LLQ0 DNA polymerase I n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLQ0_9FIRM Length = 858 Score = 298 bits (765), Expect = 8e-80, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 124/260 (47%), Gaps = 15/260 (5%) Query: 1 MAVHLLIVDALNLIRRI--------HAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 M L++VD +L+ R + + V + L + + P + FD Sbjct: 1 MEKKLVVVDGSSLLYRAFFGLPPLSYHGIPTNAVMGFLNMLYDIYKNFDPEYMAVSFDKN 60 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +R + +YKA R P P EL + +R A G + G E DD+ TLA Sbjct: 61 KQT--FRSEVYKEYKATRKPAPPELVPQFALIREALRTLGAAVYEVDGYEGDDILGTLAA 118 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW----LDAPFIDKEFGVQPQQLPDY 168 + + IV+ D+ QL + + + + + +++G+ P+Q+ D Sbjct: 119 RYEKE-LPVFIVTGDRDALQLATKDTTVYITQRGVSQMAAMTPEAVVEKYGITPRQVIDM 177 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G +S +PGV G+G K+A +LL ++Q+L+ +Y ++ + K+L +KE+A+L Sbjct: 178 KALMGDTSDNIPGVPGVGEKTAAKLLSQYQTLDNLYGHVGEIKGAVGKRLAANKELAYLS 237 Query: 229 RDIARLQTDLHIDGNLQQLR 248 +A ++TD+ + L++++ Sbjct: 238 YRLATIKTDVPFEAALEEMK 257 >UniRef50_A6TSU6 DNA polymerase I n=13 Tax=Clostridiaceae RepID=A6TSU6_ALKMQ Length = 897 Score = 298 bits (764), Expect = 1e-79, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 128/260 (49%), Gaps = 16/260 (6%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 ++I+D +LI R Q + + L +++ P + FD Sbjct: 4 KRMVIIDGNSLINRAFYALPPLTNKEGQHTNAIYGFMTMLLKVMDDYDPQYISVAFD--R 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +RH+ YKAGR MP EL +++ L+ + + G EADDL TL+ Sbjct: 62 KAPTFRHKSFEGYKAGRKKMPPELAEQLEPLKEVLDAFHIYRVEIDGFEADDLIGTLSKY 121 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 + + IV+ DK QL S ++I + D I +++ V P+Q D Sbjct: 122 AEEQDIECLIVTGDKDALQLASEKVKILFTKKGISSLEIYDPQKIMEQYEVTPEQFIDLK 181 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLC 228 GL G +S +PG+ G+G K+A +LL +F ++E + +N ++ +K R+K+E + E A + Sbjct: 182 GLMGDNSDNIPGIPGVGEKTAIKLLKQFGTVENLIQNAGEISAQKLREKVENNTEQAMMS 241 Query: 229 RDIARLQTDLHIDGNLQQLR 248 + +A + T++ ++ L++L+ Sbjct: 242 KRLATIMTNVPVEIELEKLK 261 >UniRef50_D1BM52 DNA polymerase I n=6 Tax=Veillonellaceae RepID=D1BM52_VEIPT Length = 873 Score = 298 bits (763), Expect = 1e-79, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 123/259 (47%), Gaps = 16/259 (6%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L+I+D +L+ R + V L +L P + FD Sbjct: 2 KKLMIIDGSSLLFRAFFALPPLKSALGTPTNAVYGFLTMLIKLYEEINPDYIAVAFDKGR 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R + +YK RP PE+L + ++ + G+ G E DD+ +L+ K Sbjct: 62 QT--FRTEMYSEYKGNRPDAPEDLRPQFSLIQDVLKALGICVIEEEGFEGDDILGSLSKK 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLPDYW 169 I++ D+ QL++ + + + +++ +G P ++ + Sbjct: 120 FGAPEMAVQIITGDRDNLQLVTEHSHVFLTKKGISDMLEVTLDNMEELYGYGPDKVIEMK 179 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLC 228 L G SS +PGV G+G K+A +L+ E+ +LE +YE+++ ++ +K +++L +KE+AFL Sbjct: 180 ALMGDSSDNIPGVPGVGEKTALKLITEYGNLESVYEHIEDISGKKLKERLVENKELAFLS 239 Query: 229 RDIARLQTDLHIDGNLQQL 247 R++A ++TD+ + ++ Sbjct: 240 RELATIKTDMELSYKVEDF 258 >UniRef50_B2RLP5 DNA polymerase I n=2 Tax=Porphyromonas gingivalis RepID=B2RLP5_PORG3 Length = 926 Score = 298 bits (763), Expect = 1e-79, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 17/263 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 M L ++DA LI R + + + V L ++ P H VF Sbjct: 1 MTERLFLLDAYALIFRAYYAFIRSPRIDSTGRDTGAVFGFALTLLDILEKESPEHIAVVF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D S +RH+ +YKA R PE + +P ++ +P EADD T Sbjct: 61 DPPGGS--FRHREYAEYKAQREETPEGIRIAVPLIKEMLAAFRIPAVEVPDFEADDTIGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL---DAPFIDKEFGVQ-PQQL 165 LA + + G +V+ DK + QL+S ++I + ++FG+ P Q+ Sbjct: 119 LAKQAEEQGLAVRMVTPDKDFGQLVSERIKIYRPKSGGGYETWGPAEVCEKFGLSIPGQM 178 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 DY GL G SS +PG GIG K+A +LL E+ S++GIY + D + KK++ +E Sbjct: 179 IDYLGLVGDSSDNIPGCKGIGAKTAEKLLAEYGSIDGIYAHQDELKGAVAKKIQEGEEQT 238 Query: 226 FLCRDIARLQTDLHIDGNLQQLR 248 R +A ++TD I + + R Sbjct: 239 RFSRYLATIRTDAPIVFDSEAYR 261 >UniRef50_A0PZF5 DNA polymerase I n=27 Tax=Clostridia RepID=A0PZF5_CLONN Length = 878 Score = 297 bits (761), Expect = 2e-79, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 134/261 (51%), Gaps = 16/261 (6%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LLI+D +L+ R + + L ++ +P + V FD Sbjct: 3 KERLLILDGHSLMYRAFFALPPLTNKEGIHTNAIYGFIKMLLKMKEEIKPDYIVTTFD-- 60 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +RH+ +YKAGR MP+EL+++ P ++ + + + G EADDL TL+ Sbjct: 61 KKAPTFRHKEYEEYKAGRAKMPDELNEQFPIVKDILNKLAINIFEIEGFEADDLIGTLSK 120 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 + G + IV+ D+ QL + +R+ + +K D + +E+GV P + D Sbjct: 121 FAEEKGIEVYIVTGDRDALQLATDNVRVVINKKGMSEKEIYDKNKMIEEYGVTPTEFIDV 180 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFL 227 GL G S +PGV GIG K+A +L+ E+ S+E + EN++ ++ +K ++ L ++E A L Sbjct: 181 KGLMGDKSDNIPGVPGIGNKTALKLIKEYGSIENVLENVENISGKKMKQNLIDYREQAIL 240 Query: 228 CRDIARLQTDLHIDGNLQQLR 248 + +A + D+ I+ NL +++ Sbjct: 241 SKKLATICKDVPIEINLDEIK 261 >UniRef50_A4YLA1 DNA polymerase I (POL I) n=63 Tax=cellular organisms RepID=A4YLA1_BRASO Length = 1034 Score = 297 bits (761), Expect = 2e-79, Method: Composition-based stats. Identities = 80/262 (30%), Positives = 125/262 (47%), Gaps = 17/262 (6%) Query: 3 VHLLIVDALNLIRRIHAVQG----------SPCVETCQHALDQLIMH----SQPTHAVAV 48 H+ +VD + I R + V + L +L+ +PTH V Sbjct: 55 DHVFLVDGSSYIFRAYHALPPLNRKSDGLNVNAVLGFCNMLWKLLRDMPETDRPTHLAIV 114 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD +R+Q DYKA RPP P++L + +R A +PC SG EADDL A Sbjct: 115 FDKS--EVTFRNQIYADYKAHRPPAPDDLIPQFALIREAVRAFDLPCLEQSGFEADDLIA 172 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 T A + G TIVS+DK QL++ + + D + R + + ++FGV P+++ + Sbjct: 173 TYARLACERGATTTIVSSDKDLMQLVNDCVTMYDTMKDRRIGTAEVIEKFGVPPEKVVEV 232 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFL 227 LAG S+ VPGV GIG K+A QL+ ++ LE + + K R+ L + E A + Sbjct: 233 QALAGDSTDNVPGVPGIGIKTAAQLINDYGDLESLLTRAAEIKQPKRREALIENAEKARI 292 Query: 228 CRDIARLQTDLHIDGNLQQLRL 249 R + L + ++ L L + Sbjct: 293 SRQLVLLDDKVALEVPLDDLAV 314 >UniRef50_C1A095 DNA polymerase I n=60 Tax=Actinomycetales RepID=C1A095_RHOE4 Length = 915 Score = 297 bits (760), Expect = 3e-79, Method: Composition-based stats. Identities = 66/260 (25%), Positives = 118/260 (45%), Gaps = 17/260 (6%) Query: 5 LLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L+++D +L R Q + V L L+ QPTH A FD Sbjct: 28 LMLLDGHSLAFRAFYALPAENFKTHSGQATNAVYGFTSMLINLLRDEQPTHLAAAFDVSR 87 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R P+YKA R P+E ++ + G+P + G EADD+ ATL + Sbjct: 88 QT--FRADLFPEYKAQRAKAPDEFKGQIDITKDVLGALGIPVMAEEGFEADDVIATLTTQ 145 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 G++ +V+ D+ QL++ + + + +++++ + P Q PD+ Sbjct: 146 AEALGYRVLVVTGDRDSLQLVTDNVTVLYPKKGVSELTRFTQTAVEEKYSLTPSQYPDFA 205 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G S +PG+ G+G K+AT+ + E+ L+G+ +N+D V K L + L R Sbjct: 206 ALRGDPSDNLPGIPGVGEKTATKWIREYGDLQGLVDNVDKVRGKVGDSLRENLANVLLNR 265 Query: 230 DIARLQTDLHIDGNLQQLRL 249 + + D+ + +QL L Sbjct: 266 QLTEMVRDVPLPYTPEQLVL 285 >UniRef50_A7HP95 DNA polymerase I n=11 Tax=Alphaproteobacteria RepID=A7HP95_PARL1 Length = 979 Score = 296 bits (758), Expect = 6e-79, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 127/258 (49%), Gaps = 17/258 (6%) Query: 3 VHLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIM----HSQPTHAVAV 48 HL +VD I R + G P V + L +LI +PTH + Sbjct: 22 DHLFLVDGSGYIFRAYHALPPLTRKSDGMPVGAVAGFCNMLYKLIEDTKDEFEPTHLAVI 81 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD ++ +R+ P+YKA R E+L + +R A GVPC G EADD+ A Sbjct: 82 FDAAAKT--FRNDIYPEYKANRVEPSEDLRPQFALVRDATRAFGVPCIEKKGYEADDIIA 139 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 T A +AG + TIVS+DK QL++ + + D + + + + ++FGV P+++ D Sbjct: 140 TYARLAHEAGARVTIVSSDKDLMQLVNDNVDMLDTMKLKTIAREQVIEKFGVPPEKVVDV 199 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFL 227 LAG S+ VPGV GIG K+A QL+ E+ LE + + +K R+ L E A + Sbjct: 200 QALAGDSTDNVPGVPGIGIKTAAQLIGEYGDLETLLARAGEIKQQKRRENLIEFAEQARI 259 Query: 228 CRDIARLQTDLHIDGNLQ 245 R + L ++ ++ L+ Sbjct: 260 SRRLVELDNNVPLEEPLE 277 >UniRef50_B0TER6 DNA polymerase i n=2 Tax=Heliobacteriaceae RepID=B0TER6_HELMI Length = 939 Score = 295 bits (757), Expect = 6e-79, Method: Composition-based stats. Identities = 74/257 (28%), Positives = 119/257 (46%), Gaps = 15/257 (5%) Query: 5 LLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 +++D +L+ R + V L++L QP D Sbjct: 6 FMVIDGSSLLHRAFYALPLMSTSQGVHTNAVYGFLTMLERLRREYQPDFLAVCLDKSR-- 63 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 R QR YKA R PEEL + L+ +P + G EADDL L Sbjct: 64 ITHRTQRYEAYKAQRGATPEELRPQFGLLKEVLAAWRIPLFEEEGYEADDLIGALVCLAK 123 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYWGL 171 + G + IV+ D+ QL+SP + + + D + + G+ P+Q+ D+ GL Sbjct: 124 KQGIDSLIVTGDRDAWQLISPGVEVLFTRKGISELERYDEEALKAKIGLTPRQVVDWKGL 183 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G S +PGV G+G K A +LL +F ++ +YE LD V K ++KL TH+E AFL R++ Sbjct: 184 MGDPSDNIPGVPGVGEKRAFKLLEQFGDMDSLYERLDEVKGKLKEKLATHREQAFLSREL 243 Query: 232 ARLQTDLHIDGNLQQLR 248 A +Q ++ ++ + + R Sbjct: 244 ATIQCNIPLEPDWEACR 260 >UniRef50_A5WH47 DNA polymerase I n=4 Tax=Bacteria RepID=A5WH47_PSYWF Length = 1022 Score = 295 bits (757), Expect = 7e-79, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 12/256 (4%) Query: 4 HLLIVDALNLIRRIHAVQG----------SPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 ++VD + R + + + +AL +++ PTH FD Sbjct: 53 PFVLVDGSYYLFRTYHALPKTMMTTQGLTTNAIRGTLNALLKVMRRYHPTHMAVCFD--T 110 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +S +RH +YKA RP M EL +++P + G+P G EADD+ TL + Sbjct: 111 KSPTFRHTMSEEYKANRPKMDPELAEQIPYIHRLVRALGIPLLRIEGAEADDIIGTLTHR 170 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 + GH I + DK QL++ + + D F + +D P ++++FG++P Q+ D L G Sbjct: 171 AIEEGHHVVISTGDKDMMQLVNDCVILEDSFAGKVVDVPAVEEKFGIKPNQIIDLLTLMG 230 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR 233 +S + G+ +G K+A + L ++Q+++ I N + K +KL + R +A Sbjct: 231 DASDGIKGIPSVGQKTAVKWLNQYQTVDNILANAHNIKGKVGEKLVEFVDNIPRDRQLAT 290 Query: 234 LQTDLHIDGNLQQLRL 249 + T+L I + + LR+ Sbjct: 291 IVTNLDIGQDWEDLRI 306 >UniRef50_D0WFK8 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID=D0WFK8_9ACTN Length = 905 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 16/259 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 M + ++D +L+ R + + L + ++P V FD Sbjct: 1 MPRTIAVIDGNSLMHRAYHAVPPTMNAVDGTPTNAAFGFMSMLLKFYEDARPDAIVCAFD 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + R + + YKA RPPM +EL + P + + G+P G E DD+ T+ Sbjct: 61 AGKPT--HRIEAMKAYKAQRPPMDDELRVQFPVIEGLLDAMGIPVVKVKGWEGDDILGTI 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLP 166 A + G +V+ DK QL+S R+ + + + +GV Q P Sbjct: 119 AARDEALGWNTLLVTGDKDAYQLVSDHTRVVTTRKGITDVVIYGPDEVLERYGVTAAQFP 178 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D+ GL G ++ +PGV GIGPK+AT+LL + S++GIY+NLD + K + L +++ A+ Sbjct: 179 DFLGLQGDTADNIPGVPGIGPKTATKLLQAYGSMDGIYKNLDKLKGKQLQNLADNRDQAY 238 Query: 227 LCRDIARLQTDLHIDGNLQ 245 L RD+A + DL + +L+ Sbjct: 239 LSRDLAVIVQDLDFELDLE 257 >UniRef50_A9H4T5 DNA polymerase I n=43 Tax=Alphaproteobacteria RepID=A9H4T5_GLUDA Length = 943 Score = 294 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 87/256 (33%), Positives = 125/256 (48%), Gaps = 12/256 (4%) Query: 2 AVHLLIVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDE 52 +HL++VD I R G+P V + L +L+ TH +FD Sbjct: 6 PIHLILVDGSGFIFRAFHALPPMTAPDGTPVNAVFGFTNMLARLLRDHVGTHLAVIFDAG 65 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +R+ YKA RP PEEL + +R A GVP +G EADDL A A Sbjct: 66 R--VTFRNGIYDQYKAHRPEPPEELRPQFALVRDATAAFGVPGIEEAGWEADDLIAAYAR 123 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 VT AG + T+VS+DK QL+ P + + D +++ + ++ +FGV P ++ D L Sbjct: 124 LVTDAGGRCTVVSSDKDLMQLIRPGVEMLDPIRQKPIGPKEVEAKFGVTPDKVIDVQALI 183 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDI 231 G S VPGV GIGPK+A+ L+ E+ SL+ I + A+ K R L H E A L R + Sbjct: 184 GDSVDNVPGVPGIGPKTASALIAEYGSLDAILDGAPAMKPSKRRDSLIEHAERARLSRVL 243 Query: 232 ARLQTDLHIDGNLQQL 247 L+ D L+ L Sbjct: 244 VTLREDAPCPLGLEDL 259 >UniRef50_B6R626 DNA polymerase I superfamily protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R626_9RHOB Length = 980 Score = 294 bits (753), Expect = 2e-78, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 131/265 (49%), Gaps = 20/265 (7%) Query: 3 VHLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMH-------SQPTHA 45 HL+++D I R + G P V + L +++ +PTH Sbjct: 18 DHLILIDGSTFIFRAYHALPPLTRKPDGLPVGAVSGFCNMLWKMMQEGPTKEEGDEPTHF 77 Query: 46 VAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADD 105 +FD ++ +R+ P+YKA RPP PE+L + +R A GVP G EADD Sbjct: 78 AVIFDKSGKT--FRNDFYPEYKAHRPPPPEDLRPQFGLIRQATRAFGVPAIEQQGYEADD 135 Query: 106 LAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQL 165 L AT A + G + TIVS DK QL++ + + D + + + P + ++FGV P+++ Sbjct: 136 LIATYARQAEAQGARVTIVSGDKDLMQLVTDKIGMVDTMKNKIIGKPEVFEKFGVGPEKV 195 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEM 224 + LAG S VPGV GIG K+A L+ EF L+ + E + + +K R+ L E Sbjct: 196 VEVQSLAGDSVDNVPGVPGIGLKTAALLINEFGDLDTLLEQAETIKQKKRRENLIEFAEQ 255 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 A + + + +L+ + ++ ++ + Sbjct: 256 ARISKRLVQLEEAVPVETPVEDFSV 280 >UniRef50_B7LVW5 Uncharacterized exonuclease xni n=98 Tax=Enterobacteriaceae RepID=XNI_ESCF3 Length = 251 Score = 294 bits (753), Expect = 2e-78, Method: Composition-based stats. Identities = 241/251 (96%), Positives = 246/251 (98%) Query: 1 MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRH 60 MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTH VAVFDDENR+SGWRH Sbjct: 1 MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHVVAVFDDENRNSGWRH 60 Query: 61 QRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQ 120 QRLPDYKAGRPPMP+ELH+EMP LRAAFEQRGVPCWS +GNEADDLAATLAVKVTQAGHQ Sbjct: 61 QRLPDYKAGRPPMPDELHNEMPTLRAAFEQRGVPCWSATGNEADDLAATLAVKVTQAGHQ 120 Query: 121 ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVP 180 ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVP Sbjct: 121 ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVP 180 Query: 181 GVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHI 240 GVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLE HKEMAFLCRDIARLQTD+HI Sbjct: 181 GVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLEMHKEMAFLCRDIARLQTDVHI 240 Query: 241 DGNLQQLRLVR 251 DGNLQQLRL R Sbjct: 241 DGNLQQLRLKR 251 >UniRef50_Q2JCJ5 DNA polymerase I n=10 Tax=Actinomycetales RepID=Q2JCJ5_FRASC Length = 945 Score = 294 bits (753), Expect = 2e-78, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 109/264 (41%), Gaps = 17/264 (6%) Query: 2 AVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 LL++D +L R Q + V L ++ +PTH +D Sbjct: 57 TPRLLLLDGHSLAYRAFYALPVENFSTTTGQPTNAVYGFTSMLINVLRDERPTHVAVAWD 116 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +RH + +YKAGR P + ++ + + VP S G EADD+ ATL Sbjct: 117 L--PTPTFRHTQYAEYKAGRGETPADFVGQVSLIHQVCDALAVPGVSAPGYEADDVIATL 174 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLP 166 A G +V+ D+ QL+ + + + + ++G+ P Q P Sbjct: 175 ATLGAAEGMDVLVVTGDRDALQLVDERVTVLMTRKGISDMVRFTPDEVQAKYGLSPVQYP 234 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D+ L G S +P V G+G K+AT+ + +F SL + ++ D + K L H Sbjct: 235 DFAALRGDPSDNLPSVPGVGEKTATKWIQQFGSLAELVDHADEIGGKTGASLRAHLSEVI 294 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 R + L D+ +D LR+ Sbjct: 295 RNRSLTELSRDVPLDVVPAGLRMR 318 >UniRef50_D2RIE4 DNA polymerase I n=5 Tax=Clostridiales RepID=D2RIE4_ACIFE Length = 872 Score = 294 bits (753), Expect = 2e-78, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 127/265 (47%), Gaps = 18/265 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L++D +LI R + V + + +L+ QP++ + FD Sbjct: 1 MDEKFLLIDGSSLIHRAFFALPPLTNKNGVNTGAVYGLCNMILKLLQEIQPSYMLVAFDK 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ +R ++ P+YK R P EL ++ P + G+P EADD+ TL+ Sbjct: 61 SRKT--FRTEKFPEYKGQRKATPPELKEQFPLSIQLLQSMGIPTLEVDNYEADDIIGTLS 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEF-GVQPQQLP 166 Q IV+ D+ QL+ +++ + D +E+ G+QP+Q+ Sbjct: 119 SGAP-ENVQVRIVTGDRDEFQLIKGNVQVLFTKKGISNIAVYDEKAFGEEYQGLQPRQII 177 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHKEMA 225 D GL G +S +PGV G+GPK+A +L+ E++++E + ++ + V K ++KL ++E A Sbjct: 178 DLKGLMGDTSDNIPGVPGVGPKTALKLITEYRTVENVLDHAEEVKGKALKEKLRNNREQA 237 Query: 226 FLCRDIARLQTDLHIDGNLQQLRLV 250 L +D+A + + ID + L Sbjct: 238 LLSKDLATICLQVPIDRDPGAYVLT 262 >UniRef50_Q9S1G2 DNA polymerase I n=25 Tax=Rhizobiales RepID=DPO1_RHILE Length = 1016 Score = 293 bits (751), Expect = 4e-78, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 126/256 (49%), Gaps = 22/256 (8%) Query: 1 MAV--HLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMHSQ------- 41 M HL +VD I R G P V + L +L+ ++ Sbjct: 18 MKKGDHLFLVDGSGFIFRAFHALPPLTRKTDGLPIGAVSGFCNMLWKLLRDARNTDVGVT 77 Query: 42 PTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGN 101 PTH +FD ++ +R YKA R PEEL + +R A +PC T G Sbjct: 78 PTHLAVIFDYSAKT--FRKDLYDAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGF 135 Query: 102 EADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQ 161 EADD+ AT A + G TIVS+DK QL+SP + + D + + + P + +++GV Sbjct: 136 EADDIIATYARQAEATGADVTIVSSDKDLMQLVSPNVHMYDSMKDKQIGIPDVIEKWGVP 195 Query: 162 PQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLET 220 P+++ D + G S VPG+ GIGPK+A QLL E+ L+ + E + + K R+ + Sbjct: 196 PEKMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQVKRRETILA 255 Query: 221 HKEMAFLCRDIARLQT 236 + +MA L RD+ RL+T Sbjct: 256 NIDMARLSRDLVRLRT 271 >UniRef50_C4LIB4 DNA polymerase I n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LIB4_CORK4 Length = 925 Score = 293 bits (751), Expect = 4e-78, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 17/264 (6%) Query: 2 AVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 LL++D +L R Q + V L L+ +PTH+ A FD Sbjct: 11 KKKLLLLDGHSLAFRAFYALPADKFTDSSGQHTNAVYGFISMLVTLLEQEKPTHSAAAFD 70 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +R ++ DYKA RP P E ++ +R A E G+ EADD+ ATL Sbjct: 71 LAGPT--FRSEKFADYKAQRPETPPEFKGQIELIRQALETFGITTVDYKRYEADDVIATL 128 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLP 166 A + + G I + D+ QL++ + + + +++++GV P Q P Sbjct: 129 ATQGHEQGFDTYICTGDRDSLQLVTDDVTVLYTLRGVSNLARFTPEAVEEKYGVTPTQYP 188 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D L G +S +PGV G+GPK+A + + ++ SL + +N+D + K L + Sbjct: 189 DLAALRGDTSDNMPGVPGVGPKTAQKWINKYGSLSNLIDNIDDIGGKVGDALRRDIDTVI 248 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 R++ + DL I + + + Sbjct: 249 QARELTEMVRDLPIKCSPEDCEIR 272 >UniRef50_Q1RH76 DNA polymerase I n=18 Tax=Rickettsia RepID=DPO1_RICBR Length = 871 Score = 293 bits (750), Expect = 5e-78, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 14/260 (5%) Query: 1 MAVH--LLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVF 49 M LL++D + R + Q + L +L+ +P HA VF Sbjct: 1 MTKKNTLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFTSMLLKLLNDFKPKHAAVVF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH+ P+YKA RPP PE+L ++P +R P +G EADD+ AT Sbjct: 61 DSGGK--NFRHEIYPEYKANRPPPPEDLIAQLPLVRDVARNLNFPILEKNGFEADDIIAT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 A K G + ++S+DK QL++ ++I D + +++ + ++FGV +L + Sbjct: 119 FAAKTASIGEEVVVISSDKDLLQLMNDNVKIYDPLKAKYITEDNVVEKFGVTSDKLREVM 178 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLC 228 L G S +PGV IGPK+A+ L+ +F ++E I+ +L+ V+ K R+ L+ KE A + Sbjct: 179 ALIGDKSDNIPGVPSIGPKTASSLITQFGTVENIFNSLEQVSSIKQRETLQNSKEAALIS 238 Query: 229 RDIARLQTDLHIDGNLQQLR 248 + L ++ +D L L Sbjct: 239 WQLIGLDYNVDMDFKLDALE 258 >UniRef50_Q9F173 DNA polymerase I n=177 Tax=Proteobacteria RepID=DPO1_SALTY Length = 928 Score = 292 bits (749), Expect = 5e-78, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 134/266 (50%), Gaps = 18/266 (6%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L++VD + + R + + + + + L LIM QPTHA VFD + Sbjct: 6 ENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAVVFDAK 65 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +R + YK+ RPPMP++L ++ L A + G+P + SG EADD+ TLA Sbjct: 66 GKT--FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 + + G I + DK QL++P + + + L + ++GV P+ + D+ L Sbjct: 124 EAEKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFLALM 183 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEMA 225 G SS +PGV G+G K+A LL L+ +Y + + A+ KL +K++A Sbjct: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNKDVA 243 Query: 226 FLCRDIARLQTDLHIDGNLQQLRLVR 251 +L +A ++TD+ ++ +QL + + Sbjct: 244 YLSYKLATIKTDVELELTCEQLEVQQ 269 >UniRef50_C1XI40 DNA polymerase I n=24 Tax=Bacteria RepID=C1XI40_MEIRU Length = 1273 Score = 292 bits (749), Expect = 6e-78, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 13/256 (5%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 + +VD +L R + + + + L +L+ + VFD Sbjct: 19 PDRIWLVDGHHLAYRSYFAFEKLATSRGEPTQAIFGFLRTLLKLLKEDG-DCVIVVFDPP 77 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 R+ +RH +YKAGR P++ H ++ ++ + G+ G EADD+ TLA Sbjct: 78 TRT--FRHDAFEEYKAGRAATPDDFHPQLEKIKELVDLMGLQRLEVPGYEADDVIGTLAK 135 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 K Q G+ I++ D+ QLLS +++ R + + +++GV Q DY L Sbjct: 136 KAEQEGYPVRILTGDRDSFQLLSEAVQVMLP-DGRLMHPQAVQEKYGVSVAQWVDYRSLV 194 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIA 232 G SS +PG GIG K+A +LL E+ SLEG+Y NL+A++ K R LE ++ L R ++ Sbjct: 195 GDSSDNLPGAKGIGEKTAAKLLQEWGSLEGLYANLEALSPKIRASLEESRDNVQLSRTLS 254 Query: 233 RLQTDLHIDGNLQQLR 248 + TDL ++ + + Sbjct: 255 LIHTDLPLELDFRDCH 270 >UniRef50_Q9RAA9 DNA polymerase I n=2 Tax=spotted fever group RepID=DPO1_RICFE Length = 922 Score = 292 bits (749), Expect = 6e-78, Method: Composition-based stats. Identities = 76/257 (29%), Positives = 125/257 (48%), Gaps = 12/257 (4%) Query: 2 AVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LL++D + R + Q + L +L+ +P H VFD Sbjct: 4 KNTLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFASMLLKLLSDFKPKHVAVVFDSG 63 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH P+YKA RPP PE+L ++P +R P +G EADD+ AT A Sbjct: 64 GK--NFRHHIYPEYKANRPPPPEDLVVQLPLVRDVASNLNFPILEKNGYEADDIIATFAA 121 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 K G ++S+DK QL+ ++I D + +++ + K+FG +L + L Sbjct: 122 KTAALGEDVVVISSDKDLLQLMGENIKIYDPLKGKYITEDDVVKKFGTTSDKLREVMALI 181 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDI 231 G S +PGV IGPK+A+ L+ +F S+E I+ +L+ V+ K R+ L+ KE A + + Sbjct: 182 GDRSDNIPGVPSIGPKTASSLITQFGSVENIFNSLEQVSSLKQRETLQNSKEAALISWQL 241 Query: 232 ARLQTDLHIDGNLQQLR 248 L +++ +D L L Sbjct: 242 IGLDSNVDLDFQLNNLE 258 >UniRef50_D0L9T3 DNA polymerase I n=2 Tax=Corynebacterineae RepID=D0L9T3_GORB4 Length = 949 Score = 292 bits (749), Expect = 6e-78, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 17/261 (6%) Query: 5 LLIVDALNLIRRIHAVQG-----------SPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L+++D +L R + V L L+ +PTH A FD Sbjct: 26 LMLLDGHSLAYRAFFALPAENFKTATGQTTNAVYGFTSMLINLLRDEEPTHIAAAFDVSR 85 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R + P YKA R P+E + ++ + + G+P + G EADD+ ATLA + Sbjct: 86 KT--FRSEMYPAYKAQRSKSPDEFNGQVDLTKEVLDALGIPVMAIEGYEADDIIATLATQ 143 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 G+ +V+ D+ QL++ ++ + + ++K++G+ P Q PDY Sbjct: 144 ADAEGYSVLVVTGDRDSLQLVNDSVTVLYPRKGVSELTRFTPAEVEKKYGLTPTQYPDYA 203 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G S +PG+ G+G K+A++ + E+ SL + +++D V K L + R Sbjct: 204 ALRGDPSDNLPGIPGVGEKTASKWIREYGSLASLVDHVDEVKGKVGDALRANLASVQTNR 263 Query: 230 DIARLQTDLHIDGNLQQLRLV 250 + L D+ + +L +V Sbjct: 264 QLTELVRDMQLPAGPDELAMV 284 >UniRef50_C8PRX0 DNA polymerase I n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PRX0_9SPIO Length = 951 Score = 292 bits (749), Expect = 7e-78, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 16/260 (6%) Query: 3 VHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 L ++D+ LI R + + + +L ++ +P + +A FD Sbjct: 7 DTLYLLDSYGLIYRSYFAFISHPLTNKAGENVSALYGFFRSLAMILKTYRPRYFLAAFDS 66 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 R+ +RH+ +YKA R PE+LH ++P + G+ C G EADD+ ATLA Sbjct: 67 --RTPTFRHEWYSEYKATRDKTPEDLHAQIPHIEKILTALGIACLRKDGFEADDIIATLA 124 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL---DAPFIDKEFGVQPQQLPDY 168 + Q G + I+S DK QL+ + + + L + +GV P Q+ DY Sbjct: 125 RRSAQEGRRCVIISGDKDLAQLVGDFVSVLKPDKSEALAQCGVEEVKAHWGVAPAQMLDY 184 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G S+ +PGV GIGPK+A +LL ++ +L+ +YE++D++A +KKL K+ A+ Sbjct: 185 LSLIGDSADNIPGVKGIGPKTAVKLLQDYGTLDAVYEHIDSIAGAVQKKLAAGKDSAYFS 244 Query: 229 RDIARLQTDLHIDGNLQQLR 248 + + L ++ I+G L R Sbjct: 245 KKLITLADNVPIEGTLDDYR 264 >UniRef50_B1YKA1 DNA polymerase I n=3 Tax=Bacilli RepID=B1YKA1_EXIS2 Length = 865 Score = 292 bits (748), Expect = 8e-78, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 18/263 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M LL++D +L R + + L +L+ QPTH + FD Sbjct: 2 MENKLLLIDGNSLTYRAFFALPPMTDAQGRNTNAAYGFTMMLLKLLEEEQPTHMLVAFDA 61 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 S +RH +YK R P EL ++ P +R E G+ EADDL TLA Sbjct: 62 S--SETFRHDVYQEYKGSREKTPSELREQFPIVRDICEALGIQMMELHRYEADDLIGTLA 119 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW----LDAPFIDKEFG-VQPQQLP 166 + + IV+ DK QL++ + + + + + +G ++P Q+ Sbjct: 120 QTMPA--DRIRIVTGDKDLLQLVTSQVEVLITKRGITDVLCMTEELFAETYGGLKPIQMI 177 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D GL G S +PGV GIG K+A +L+ + S+EG+YE+++ + K ++K+ ++E+A Sbjct: 178 DLKGLMGDKSDNIPGVPGIGEKTAIKLISAYGSVEGLYEHVEDLKGKQKEKVVANEELAR 237 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 L +++A ++ D+ +D L L++ Sbjct: 238 LSKELATIKLDVPLDVTLDDLQI 260 >UniRef50_A6CAX6 DNA polymerase I n=2 Tax=Planctomycetaceae RepID=A6CAX6_9PLAN Length = 900 Score = 292 bits (748), Expect = 9e-78, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 12/260 (4%) Query: 1 MAVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L I+D +L+ ++ Q + + + +I P + + D Sbjct: 1 MKETLYIIDTFSLVFQVFHAVPAMTGPTGQPTNAIFGITRDILNIIKTHSPDYLIFAMDS 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + R+ +YKA R MPE+L ++P + + VP G EADD+ AT+A Sbjct: 61 SGPGT--RNDLYSEYKANRSAMPEDLVPQIPHIMDVVKGFQVPVIECPGWEADDVFATIA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + G + TIV+ DK QL++ ++R+ + + +++DA + ++GV+P Q+ D+ L Sbjct: 119 RLANEKGIETTIVTNDKDARQLINDSIRLYNIRKNQFMDAEAVQADWGVRPDQVIDFQSL 178 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRD 230 G S +PGV +GPK A L+ +F +LEG+ N D K ++ L+ + A + R+ Sbjct: 179 VGDSVDNIPGVPLVGPKKAQTLIEQFGTLEGVLANADKAKGPKLQQNLKEFADQARMSRE 238 Query: 231 IARLQTDLHIDGNLQQLRLV 250 + L L ++ N + RL Sbjct: 239 LVTLNQSLDLNINWEASRLT 258 >UniRef50_C0ZE02 Putative 5'-3' exonuclease n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE02_BREBN Length = 292 Score = 291 bits (746), Expect = 1e-77, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 1 MAV--HLLIVDALNLIRRIHAVQG-------------SPCVETCQHALDQLIMHSQPTHA 45 M+ +L++D ++ + R + V + ++P+H Sbjct: 1 MSDSGKVLLIDGMSFLFRAFYGSAWGGAYRQTSTGVYTNAVYGFTKMMLDYAELTRPSHL 60 Query: 46 VAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADD 105 V +D +R S R Q YK+ R P+EL + ++ + VP G E DD Sbjct: 61 VVGWDVASRESLVRSQWYDGYKSNRQAAPDELIPQFDLVKEVTDAFSVPNLGCPGFEGDD 120 Query: 106 LAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK---RWLDAPFIDKEFGVQP 162 + TL+ ++++ GH+ I + D QL+S + ++ + + G+ P Sbjct: 121 VLGTLSTRLSEEGHEVIIATGDYDSLQLISERVSVKILKNGGKHEHYNPASLLALRGITP 180 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHK 222 +Q+ D L G +S +PG GIG K+AT+L+ E L+ +Y NL K R KLE ++ Sbjct: 181 EQVVDVKALMGDASDCIPGCPGIGEKTATKLITEHGDLDNLYVNLANCTPKMRSKLEENR 240 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQ 246 + +L R +A + D+ ++ L+ Sbjct: 241 DQVYLSRKLATIIRDVPVEYALED 264 >UniRef50_Q1V0V5 DNA polymerase I n=3 Tax=Candidatus Pelagibacter RepID=Q1V0V5_PELUB Length = 924 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 20/268 (7%) Query: 2 AVHLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMH-------SQPTH 44 H ++D I R + G P V L +L+ +PTH Sbjct: 7 TDHFYLIDGSGYIFRAYYALPPLTRKSDGLPVGAVSGFCSMLFKLLEDSKSNENLQKPTH 66 Query: 45 AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEAD 104 +FD ++ +R++ DYKA R P++L + +R + +P EAD Sbjct: 67 FAVIFDAARKT--FRNEIYSDYKANRSEAPDDLAPQFEYIRKSVVAFNLPSVDLPNYEAD 124 Query: 105 DLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQ 164 DL AT ++ G + TIVS+DK QL +RI D + +++ I +FGV P++ Sbjct: 125 DLIATYVEQILAKGAKVTIVSSDKDLMQLYRKDVRIFDPMKNKFITPEDIVTKFGVGPEK 184 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKE 223 + D LAG SS VPGV GIG K+A +L+ ++ +LE + +N + + K R+ L +K+ Sbjct: 185 VIDVQSLAGDSSDNVPGVPGIGVKTAAELINKYGTLEKLLDNAQEIKQNKRRETLIENKD 244 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRLVR 251 A + + + L D ++ L++ L + Sbjct: 245 KAIISKKLVTLMKDAPVERKLEEFHLKK 272 >UniRef50_B2V602 5'-3' exonuclease n=4 Tax=Hydrogenothermaceae RepID=B2V602_SULSY Length = 299 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 132/261 (50%), Gaps = 12/261 (4%) Query: 1 MAVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M +L++D + + R + + + V L + + + FD Sbjct: 1 MKNKVLLIDGSSYLYRAYYALPPLTAPDGRPTGAVYGFIRMLLKTLSVFNTPYVAVAFDL 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ RH++ +YKA R P+ L ++P L+ + G+ G EADD+ ATL+ Sbjct: 61 PGKT--LRHEKFSEYKATRKETPDPLKQQIPILKEIIQLLGIKILEIPGYEADDIIATLS 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 K + G++A IV+ DK QL+S ++I + ++ LD I +++G+ PQQ DY + Sbjct: 119 KKAEKEGYEAIIVTPDKDMNQLISDNIKIFNPVKEELLDKEKIKEKYGIHPQQFIDYLTM 178 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLET-HKEMAFLCRD 230 G + +PG+ GIGPK+A LL EF SLE I EN+D + K ++ + KE ++ Sbjct: 179 IGDAVDNIPGIKGIGPKTAAALLQEFGSLENILENVDKLKGKLKESFKELDKEQLQRMKE 238 Query: 231 IARLQTDLHIDGNLQQLRLVR 251 I +L ++ I+ ++ L+ + Sbjct: 239 IIKLDANIEINIKIEDLKKSK 259 >UniRef50_P43741 DNA polymerase I n=222 Tax=cellular organisms RepID=DPO1_HAEIN Length = 930 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 128/264 (48%), Gaps = 18/264 (6%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L++VD + + R + + + + L LI QPTH VFD + Sbjct: 6 TNPLVLVDGSSYLYRAFHAFPSLTNAAGEPTSAMYGVLNMLKSLISQVQPTHIAVVFDAK 65 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +R + YK+ RPPMP++L ++ L G+P G EADD+ TLA+ Sbjct: 66 GKT--FRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEADDVIGTLAL 123 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 + + G + I + DK QL+ + + + LD + +++G+ P+ + DY L Sbjct: 124 QASSLGKKVLISTGDKDMAQLVDDNIMLINTMNNSLLDRKGVIEKYGIPPELIIDYLALM 183 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEMA 225 G S+ +PGVAG+G K+A LL S+ IY NL+ V A+K +KL K A Sbjct: 184 GDSADNIPGVAGVGEKTALGLLQGIGSMAEIYANLEKVAELPIRGAKKLGEKLLAEKNNA 243 Query: 226 FLCRDIARLQTDLHIDGNLQQLRL 249 L +A ++TD+ ++ QL L Sbjct: 244 DLSYTLATIKTDVELNVTTDQLLL 267 >UniRef50_C1ZLA6 DNA polymerase I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZLA6_PLALI Length = 1031 Score = 290 bits (744), Expect = 2e-77, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 12/256 (4%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 ++D ++ ++ Q + V L LI +PT + D Sbjct: 94 ERAWLIDVFGVMFQVFHAIPPMTSPAGQPTNAVFGFCRDLLWLIEKQKPTWLICAMDSPG 153 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 R P+YKA R MPE+L ++P L+ FE G+P G EADD+ A+LA + Sbjct: 154 PG--IRESWYPEYKANRTEMPEDLRPQIPLLKEVFEAFGLPIIQQDGWEADDVLASLAAQ 211 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 + G IV+ DK QLL+P ++I + + W + + +E+G++P Q+ D+ GL G Sbjct: 212 FARHGTDVAIVTNDKDARQLLTPQIQIYNLRKMTWFNEASLLEEWGIRPDQVVDFQGLVG 271 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIA 232 + VPGV +GPK A LL +F++LEG+ + D K ++ L+ E A L + + Sbjct: 272 DAVDNVPGVPLVGPKKAAALLQQFETLEGVLAHADQAPGAKLKENLKNFAEQARLSQKLV 331 Query: 233 RLQTDLHIDGNLQQLR 248 RL T+L +D + + R Sbjct: 332 RLNTELQLDFDPEAGR 347 >UniRef50_A0LIP7 DNA polymerase I n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIP7_SYNFM Length = 902 Score = 290 bits (743), Expect = 3e-77, Method: Composition-based stats. Identities = 82/257 (31%), Positives = 124/257 (48%), Gaps = 13/257 (5%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 A +VD + I R + + V LD+++ +P + VFD Sbjct: 5 ARTFYLVDGSSYIYRAYYAVSRLTNSRGFPTGAVLGFAQMLDKVVREKKPDYICVVFDAP 64 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH+ YKA R PE++ ++P ++ RG+P G EADDL ATL Sbjct: 65 GPT--FRHEMYAPYKATRQKAPEDMIAQIPYIKDLVRFRGIPQMELPGYEADDLIATLTH 122 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPT-LRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + + +VS+DK QL+ +R D + R ++ +GV P ++ DY L Sbjct: 123 WAVEQDIEVVVVSSDKDLHQLIDDPVVRQWDPQKDRVFMEWEVEDRYGVPPGRMVDYLAL 182 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRD 230 G SS VPGV GIG K+A QLL E+ SL+ IY NL V + R KLE H+E A L R Sbjct: 183 VGDSSDNVPGVKGIGDKTARQLLQEWGSLDRIYANLARVGSASVRDKLEKHREEALLSRR 242 Query: 231 IARLQTDLHIDGNLQQL 247 + + D+ ++ L+ Sbjct: 243 LVSFREDVPVERKLEAF 259 >UniRef50_Q4JW27 DNA polymerase I n=2 Tax=Corynebacterium jeikeium RepID=Q4JW27_CORJK Length = 859 Score = 290 bits (743), Expect = 3e-77, Method: Composition-based stats. Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 18/262 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 MA LL++D +L R Q + V L+ QPTH A F Sbjct: 1 MA-KLLLLDGHSLAFRAFYALPAANFSTVGGQHTNAVYGFLGMFLTLMDKEQPTHVAAAF 59 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +R + P+YKA RP PEE ++ +R E GV EADD+ AT Sbjct: 60 DLSGPT--FREESFPEYKAQRPSTPEEFKGQIELIRRTLEALGVTTLDKESYEADDIIAT 117 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQL 165 LA + + G I + D+ QL++ + + + +++++GV P Q Sbjct: 118 LATEGAKDGMDVLICTGDRDSLQLVTEDVTVLYTLKGVSELHRFTPQAVEEKYGVTPTQY 177 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 PD L G +S +PGV G+GPK+A + + ++ SL+G+ +N+D + K L + + Sbjct: 178 PDLAALRGDTSDNMPGVPGVGPKTAQKWIAKYGSLQGVIDNMDDIGGKVGANLRENIDNV 237 Query: 226 FLCRDIARLQTDLHIDGNLQQL 247 L RDI + DL + +L L Sbjct: 238 VLARDITEMVRDLKLVDDLDAL 259 >UniRef50_C6XHK7 DNA polymerase I n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHK7_LIBAP Length = 976 Score = 290 bits (743), Expect = 3e-77, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 129/263 (49%), Gaps = 17/263 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQG----------SPCVETCQHALDQLI----MHSQPTHAVA 47 HL +VD + I R + + L +L+ S +H Sbjct: 4 ENHLFLVDGSSFIYRAFYATPLLSRKHDGLPVNAIAGFCNMLWKLLQNSRKESIASHFAV 63 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 +FD + +R++ PDYKA RP +PE L ++P +R A + G+P G EADD+ Sbjct: 64 IFDY--PAVTFRNEIYPDYKANRPKIPEMLLPQLPLVRLATQAFGIPAIEIQGFEADDII 121 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPD 167 AT + G TI+STDK QL+SPT + D ++ +D + K++G+ P+++ Sbjct: 122 ATYTYIAEKEGFAVTIISTDKDLMQLVSPTTCLYDTVKEEKIDIEHVIKKWGIPPEKMVC 181 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAF 226 L G S +PG+ GIG K+A LL E+ +LE I N + +K R+ + + E A Sbjct: 182 LQALTGDSIDNIPGIPGIGYKTAALLLQEYGNLENILINASRIKQKKRRENILEYAETAR 241 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 L R + L+TD+ I L+ L L Sbjct: 242 LSRKLVMLRTDVPITIPLEHLIL 264 >UniRef50_C3U0N1 Truncated DNA polymerase I n=1 Tax=uncultured bacterium RepID=C3U0N1_9BACT Length = 557 Score = 290 bits (742), Expect = 3e-77, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 19/267 (7%) Query: 1 MAVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 M L ++DA+ LI R + + + L LI +PTH F Sbjct: 1 MPKKLFLLDAMALIYRAYYALIRSPRITSKGRNTNAQFGFTSTLIDLINKEKPTHLAVCF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D E + RH +YKA R PE+L +P ++ +P G EADD+ T Sbjct: 61 DTEAATE--RHTDFAEYKANRQAAPEDLISALPDIKKIITAFNIPVVELDGYEADDVIGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQL-LSPTLRIRDY----FQKRWLDAPFIDKEFGVQP-Q 163 LA + G++ +V+ DK Y QL + + I ++ LDA I +++G++ Sbjct: 119 LAWQAADKGYEVFMVTPDKDYGQLLIHNNVFIYKPPYQGGKEDILDAKKICEKWGIERVD 178 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 Q+ D GL G + +PG+AGIG K+A +LL EF +LE I N D + +K+ KE Sbjct: 179 QVVDMLGLMGDAVDNIPGIAGIGEKTACKLLKEFDNLENILANADNIKGAVGEKIRNGKE 238 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRLV 250 A + + +AR+ TD+ + + + RL Sbjct: 239 AALMSKKLARIITDVPVQFHEEDYRLK 265 >UniRef50_B8FU82 DNA polymerase I n=2 Tax=Desulfitobacterium hafniense RepID=B8FU82_DESHD Length = 873 Score = 289 bits (741), Expect = 5e-77, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 126/265 (47%), Gaps = 17/265 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ +LI+D +L R + + + L +L++ +P + V FD Sbjct: 1 MS-KILILDGNSLANRTFYALPMMTTADGKPTNVLHGFMTMLLRLLLEQKPDYWVVAFDK 59 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + R ++ DYKA R P+ L + L+ +P G EADD+ AT+ Sbjct: 60 TKATV--RIEQYADYKAQRKETPDALKPQFDFLKELLTAFAMPILECPGYEADDIIATVT 117 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW----LDAPFIDKEFGVQPQQLPD 167 Q + I + D+ QL+SP + + D + +++ ++P Q+ D Sbjct: 118 SLAEQREWETQIYTGDRDALQLISPRTTVYLTRKGITEVDAYDEGALYEKYQLRPAQIID 177 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAF 226 GL G +S +PGV G+G K+A +LL E+ S+E + +N+D ++ +K ++ L + + A Sbjct: 178 LKGLMGDASDNIPGVPGVGEKTALKLLWEYGSVENVLDNIDKISGKKLQENLRNNTDKAL 237 Query: 227 LCRDIARLQTDLHIDGNLQQLRLVR 251 L + +A + D+ ++ +L +L R Sbjct: 238 LSKKLATMLYDIPLEIDLDRLVYRR 262 >UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QY72_9DELT Length = 914 Score = 289 bits (741), Expect = 5e-77, Method: Composition-based stats. Identities = 85/261 (32%), Positives = 131/261 (50%), Gaps = 14/261 (5%) Query: 1 MAVH--LLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 M+ L ++D I R + Q + V L ++I P + + Sbjct: 1 MSSREPLYLIDGSAYIYRAYHAIRPLSNAAGQPTHAVYGFTTTLLRVIREKTPRYLAIAY 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH+ P YKA RP MP +L ++P ++ + +G EADDL A Sbjct: 61 DS--KGPNFRHEIYPAYKANRPEMPADLACQIPYIKEVVSAYHITTLEQAGVEADDLIAA 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 A ++ IVS DK QL++ + + D Q ++D + K++ V PQQL DY+ Sbjct: 119 AARRLAGPDQPLIIVSGDKDLLQLVNEWVTLWDPMQDTFMDPAAVAKKYQVSPQQLLDYF 178 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLC 228 L G SS VPGV G+GPK+A +L+ +F SLE ++ NL+ V A K R+KL H++ A L Sbjct: 179 ALIGDSSDNVPGVPGVGPKTAAKLIDQFGSLEQLFANLEQVSAAKLREKLAAHRQDAQLA 238 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 R + RL+ DL + +L L Sbjct: 239 RRLIRLKDDLELPTSLDDYTL 259 >UniRef50_B2TNM6 DNA polymerase I n=7 Tax=Clostridiales RepID=B2TNM6_CLOBB Length = 871 Score = 289 bits (741), Expect = 6e-77, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 16/260 (6%) Query: 3 VHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 LLI+D+ +L+ R + + + L ++ P + +A FD Sbjct: 2 KRLLILDSNSLMNRAFYALPPLTNDDGVNTNAIYGFTNMLFKMKDEINPDNIIATFD--K 59 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +S +RH+ +YKAGR MP EL ++ P ++ + G+ + G EADD+ T++ Sbjct: 60 KSPTFRHKEYSEYKAGRKKMPPELGEQFPIIKELLKYMGIKTFEIDGFEADDIIGTISKF 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLPDYW 169 + + IV+ DK QL S ++ + D EF + P Q D Sbjct: 120 GEENDMEVYIVTGDKDALQLASEKTKVVITKKGVTETAIYDYKAFMDEFEITPTQFIDVK 179 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLC 228 GL G S +PGV G+G K+A +L+ E+ +LE + +++ ++ +K ++ LE + E A Sbjct: 180 GLMGDKSDNIPGVPGVGEKTAFKLIKEYGTLEDVLKHIPEISGKKLKENLENNMEQAIFS 239 Query: 229 RDIARLQTDLHIDGNLQQLR 248 + +A + ++ +D NL + Sbjct: 240 KKLATIMREVPLDINLSDIE 259 >UniRef50_Q2RHE8 DNA polymerase I n=4 Tax=Clostridia RepID=Q2RHE8_MOOTA Length = 885 Score = 289 bits (740), Expect = 6e-77, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 110/260 (42%), Gaps = 16/260 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LL+VD ++I R + V L + +P + + FD Sbjct: 5 TARLLLVDGNSVIHRAFHALPPLQTREGIRTNAVYGFATMLQKAREMFKPDYIIVAFDHS 64 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +R++ +YK RP EL + ++ + G EADDL TL+ Sbjct: 65 K--VTFRNELYDEYKGTRPETDPELRPQFALVKRLLAAWNLASCEVEGYEADDLIGTLSR 122 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDY 168 + G + I++ D+ QL+ +++ + +D I K +G++P+QL D Sbjct: 123 QGAATGLEVLILTGDRDALQLVGERVKVLLMRRGLSQVEVIDREAIKKNYGLEPEQLIDV 182 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFL 227 L G +S +PGV G+G K+A QL+ ++ LEG+ + + + + L T + A L Sbjct: 183 KALMGDASDNIPGVPGVGEKTAVQLVRQYGDLEGVLAHSGEIKGRRVAENLVTFADQARL 242 Query: 228 CRDIARLQTDLHIDGNLQQL 247 R +A + + +L Sbjct: 243 ARRLATIDCQAPVTLDLAGC 262 >UniRef50_C7GEY2 DNA polymerase I n=6 Tax=Clostridiales RepID=C7GEY2_9FIRM Length = 930 Score = 289 bits (740), Expect = 7e-77, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 128/265 (48%), Gaps = 18/265 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L+++D +++ R + V + + +++ QP + FD Sbjct: 5 MGEKLVLIDGHSILNRAFFGIPDLTNSEGLHTNAVYGFLNIMFKILEEEQPDYLTVAFDV 64 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH+ +YK R PM +EL +++P ++ + GV G EADDL T+A Sbjct: 65 SEPT--FRHKMFAEYKGTRKPMAQELREQVPLMKEMLKAMGVTTIEKGGYEADDLLGTIA 122 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW------LDAPFIDKEFGVQPQQL 165 + Q G ++VS D+ QL + ++IR KR +A + +++ V P + Sbjct: 123 KQSEQKGLTVSVVSGDRDLLQLATDHIKIRIPKTKRTGTEIEDYNAAEVQEKYQVTPIEF 182 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR-KKLETHKEM 224 D L G ++ +PGV GIG K+AT ++ ++ S+E Y ++D + K L+ + ++ Sbjct: 183 IDVKALMGDTADNIPGVPGIGEKTATAIIAQYGSVENAYAHVDELKPPRASKNLKEYYDL 242 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 A + + +A ++ ID +L +L Sbjct: 243 AQMSKTLATIEIHADIDYDLSGAKL 267 >UniRef50_Q1PUU8 Stongly similair to DNA polymerase I n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUU8_9BACT Length = 887 Score = 289 bits (740), Expect = 7e-77, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 126/260 (48%), Gaps = 13/260 (5%) Query: 1 MAVHLLIVDALNLIRRIHAV--------QGSPC--VETCQHALDQLIMHSQPTHAVAVFD 50 M I+D + + G+P V L +L+ +P + VFD Sbjct: 1 MPERFFIIDGHSHCYQAFYAITAKLTTPDGTPANAVYGFTRMLLKLLREQRPDYLALVFD 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + ++ RHQ+ DYKA R PE+L ++P + G+P ++ G EADD+ +L Sbjct: 61 TKYTTN--RHQKYSDYKATRKETPEDLQVQIPLIYKVVRAFGIPVYAAKGYEADDVIGSL 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 + + + IV++DK QL+ P ++I + +D+ + + G+ P Q+ D Sbjct: 119 VTVLEKKEIEVVIVTSDKDLEQLIGPKVKILHAKKGEIIDSDVLFTQKGIMPNQVVDVLA 178 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR-KKLETHKEMAFLCR 229 LAG S +PGV GIG K+A L+ ++ SLE + N+ ++ K R + L T + A R Sbjct: 179 LAGDVSDNIPGVPGIGNKTALDLIKKWGSLESVLANVGHISGKKRQENLRTFADQARFSR 238 Query: 230 DIARLQTDLHIDGNLQQLRL 249 ++ L D+ + +++ RL Sbjct: 239 ELLDLYNDIPLTVDMESCRL 258 >UniRef50_C5CBM1 DNA polymerase I n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5CBM1_MICLC Length = 937 Score = 289 bits (740), Expect = 8e-77, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 17/263 (6%) Query: 2 AVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 LL++D ++ R Q + V L +I +PTH FD Sbjct: 10 PQRLLVLDGHSMAFRAFYALPAENFATDTGQHTNAVYGFTAMLLTMIRQQRPTHVAVAFD 69 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +R + +YKAGR P E ++ E G+P + G EADD+ ATL Sbjct: 70 LSGPT--FRSEEYAEYKAGRSETPAEFAGQIELTVKVMEALGIPTLTLEGYEADDIVATL 127 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW----LDAPFIDKEFGVQPQQLP 166 + + +AG +A +VS D+ QL+S + + +DA + ++GV P Q P Sbjct: 128 SARAEEAGWEAVVVSGDRDAFQLISERTTVLYPKKGVSDIPPMDADAVLAKYGVAPAQYP 187 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 + L G ++ +PGV G+GP A + L ++ L+G+ + + K + L H E Sbjct: 188 ELAALVGEAADNLPGVPGVGPGFAAKWLKQYGDLDGVLAHAHEITGKKGEALREHLEDVR 247 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 R + L DL + L+ +RL Sbjct: 248 RNRRLNALVRDLDLPIGLEAMRL 270 >UniRef50_B1BYY4 DNA polymerase I n=4 Tax=Bacteria RepID=B1BYY4_9FIRM Length = 873 Score = 289 bits (740), Expect = 8e-77, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 118/267 (44%), Gaps = 21/267 (7%) Query: 1 MAVHLLIVDALNLIRRIHAVQ-------------GSPCVETCQHALDQLIMHSQPTHAVA 47 M L+++D +L+ R + + V + L+ ++ P + V Sbjct: 4 MKE-LVLIDGNSLLYRAYYATAAMGNLMVNKDGIPTNAVYGFANMLENILKG-NPEYIVV 61 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 FD ++ +R+ YK R P+EL + +R G+ G E DD+ Sbjct: 62 AFDYGKKT--FRNDLFEVYKGTRSATPDELVCQFSMIREYLTAHGIHYQEIEGYEGDDVI 119 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQ 163 T+A ++ + +IV++DK QL+ + + + + + +G+ P Sbjct: 120 GTIASIASKKRFKVSIVTSDKDMLQLVDDNVSVYLTKKGVAELEKITPEKFKEMYGLIPD 179 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 Q+ D GL G + +PG+ G+G K+A +LL ++ ++E + ++LD + K +K+ + + Sbjct: 180 QMRDLKGLMGDKADNIPGIPGVGEKTALKLLKQYHTIENLNDHLDELKGKMGEKIRDNID 239 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRLV 250 L + IA + D+ ++ +L Sbjct: 240 QGLLSKKIATIIKDVPMELDLDDFYYQ 266 >UniRef50_A6G5W6 DNA polymerase I n=2 Tax=cellular organisms RepID=A6G5W6_9DELT Length = 933 Score = 288 bits (739), Expect = 9e-77, Method: Composition-based stats. Identities = 86/260 (33%), Positives = 129/260 (49%), Gaps = 18/260 (6%) Query: 5 LLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 + +VDA N + R + + V + + P H +AVFD S Sbjct: 1 MFLVDANNFLFRAYHALPMLTAPDGRPVNAVHGYVRMVQAIRKEFAPQHLLAVFDASG-S 59 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 GWR + +YKA RPP PE+L ++P +R A + +P EADDL A Sbjct: 60 KGWRRELYAEYKANRPPPPEDLQPQIPLVREATDALSIPWLEDPRYEADDLIARYVQAGV 119 Query: 116 QAGHQATIVSTDKGYCQLL-------SPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 +A + IVS+DK QL+ ++R+ D + R + + +FGV P++L D Sbjct: 120 EAKLEVVIVSSDKDLMQLVAGPDDVREGSVRLWDTMKNRRVGPAEVVAKFGVGPEKLGDL 179 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFL 227 LAG SS +PGV GIGPK+AT LL + LEGI N D + +K R+ LET+ E A + Sbjct: 180 LALAGDSSDNIPGVKGIGPKTATSLLETYGDLEGILSNTDKIKQKKRRENLETYAEDARM 239 Query: 228 CRDIARLQTDLHIDGNLQQL 247 R + L+TD + ++ + Sbjct: 240 SRKLVALRTDYDLPRPIEDV 259 >UniRef50_P52028 DNA polymerase I, thermostable n=18 Tax=Bacteria RepID=DPO1T_THET8 Length = 834 Score = 288 bits (737), Expect = 1e-76, Method: Composition-based stats. Identities = 76/255 (29%), Positives = 131/255 (51%), Gaps = 13/255 (5%) Query: 4 HLLIVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDENR 54 +L+VD +L R +G P V +L + + VFD + Sbjct: 13 RVLLVDGHHLAYRTFFALKGLTTSRGEPVQAVYGFAKSLLKALKEDGYKAVFVVFDA--K 70 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + +RH+ YKAGR P PE+ ++ ++ + G G EADD+ ATLA K Sbjct: 71 APSFRHEAYEAYKAGRAPTPEDFPRQLALIKELVDLLGFTRLEVPGYEADDVLATLAKKA 130 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 + G++ I++ D+ QL+S + + + + ++ +++G++P+Q D+ L G Sbjct: 131 EKEGYEVRILTADRDLYQLVSDRVAVLHP-EGHLITPEWLWEKYGLRPEQWVDFRALVGD 189 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIAR 233 S +PGV GIG K+A +LL E+ SLE + +NLD V R+K++ H E L +++R Sbjct: 190 PSDNLPGVKGIGEKTALKLLKEWGSLENLLKNLDRVKPENVREKIKAHLEDLRLSLELSR 249 Query: 234 LQTDLHIDGNLQQLR 248 ++TDL ++ +L Q R Sbjct: 250 VRTDLPLEVDLAQGR 264 >UniRef50_Q1AUF6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUF6_RUBXD Length = 843 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 18/263 (6%) Query: 3 VHLLIVDALNLIRRIHAVQG----------SPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 + + ++D +L+ R + + + +L+ + V+D Sbjct: 12 MRVYLIDGYSLLYRAFYALPQSIATSSGLPTNALYGFTSMVLKLLDSDEELGIGVVWDGG 71 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R + P+YKA R MPEEL ++ L E +P G EADD+ AT++ Sbjct: 72 LPA--FRTEVYPEYKAQRSAMPEELRVQLDHLDEILEAMNIPVVRVEGFEADDVLATVSR 129 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDY 168 ++ G + IV+ D+ QL+ +R+ + + + +E+GV P+Q+PDY Sbjct: 130 RLP-EGVELYIVTGDQDAMQLVDGRVRVLRTTRGVSETKVYGRREVMEEYGVSPEQIPDY 188 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHKEMAFL 227 L G S +PGV GIGPKSA LL F SLE +YE L+ V + R+KLE +E AFL Sbjct: 189 KALVGDPSDNIPGVRGIGPKSAAALLRRFGSLEALYERLEEVEARGTRRKLEEGRENAFL 248 Query: 228 CRDIARLQTDLHIDGNLQQLRLV 250 +AR++ D + + ++LR Sbjct: 249 SLRLARMRFDAPVQFDPERLRFR 271 >UniRef50_Q2S226 DNA polymerase I n=4 Tax=Rhodothermaceae RepID=Q2S226_SALRD Length = 926 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 17/260 (6%) Query: 5 LLIVDALNLIRRIHA-----------VQGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L ++DA++L R H Q + ++L +LI HA VFD E Sbjct: 13 LYLIDAMSLAYRAHYIFISRPLINSKGQNTSAAYGFTNSLLKLIEDHDIEHAAVVFD-EG 71 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +R + DYKA R P PEEL + +P ++ E +P G EADD+ LA + Sbjct: 72 EEDTFRKEMYDDYKANRDPPPEELLENIPYIKEIVEGLDIPVLEVPGVEADDVIGALAKQ 131 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 IVS DK + QLLS + I + E+G+ P Q D Sbjct: 132 AEADDADVVIVSPDKDFKQLLSDKVSIYKPAKGDQDFEIKTGDTFRDEYGLDPAQFVDML 191 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW-RKKLETHKEMAFLC 228 L G SS VPGV GIG K+A +LL E+ S+E + ++ D ++ K R+ ++ H E A L Sbjct: 192 ALMGDSSDNVPGVYGIGEKTAQKLLREYHSVENLIDHADDLSGKRAREGMQEHAEEARLS 251 Query: 229 RDIARLQTDLHIDGNLQQLR 248 + + R++T+L + + +L+ Sbjct: 252 KRLVRIRTELDVGLDWHELQ 271 >UniRef50_C7HT94 DNA polymerase I n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HT94_9FIRM Length = 893 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 70/264 (26%), Positives = 128/264 (48%), Gaps = 16/264 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ ++++D +LI R + V + + +P + + FD Sbjct: 15 MSKKVMLIDGSSLIFRAFFALPNLTNADGVMTNGVYGFLTMYFRAVEEYKPDYILVAFD- 73 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ +RH+ DYKA R P EL+ + L+ + V G EADD+ T + Sbjct: 74 -KKTKTFRHKEFEDYKANRDKAPNELNYQFGILKDILDSLNVKYLDIDGYEADDIVGTFS 132 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 + G + I++ DK Y QL++ + + + + I+ ++G+ P+QL D Sbjct: 133 TIAKEEGLETVIITGDKDYFQLVNDKVVVFLTRKGISQMEEITVKSIEDDYGLSPKQLID 192 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW-RKKLETHKEMAF 226 GL G S +PGV GIG K+A + + ++ S+EG+YENLD + K ++ LE K++AF Sbjct: 193 VKGLMGDKSDNIPGVDGIGEKTAIKFIKKYGSMEGLYENLDDIKGKKTKENLENSKQIAF 252 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 L + I + T+ + + +L++ Sbjct: 253 LSKKIGTIVTNAPVGMKISELKVK 276 >UniRef50_O67550 5'-3' exonuclease n=2 Tax=Aquificaceae RepID=EX53_AQUAE Length = 289 Score = 287 bits (735), Expect = 2e-76, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 122/258 (47%), Gaps = 14/258 (5%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L I+D + + R + + L LI +P + V VFD Sbjct: 2 KTLYILDGSSFVYRSFFALPPLSTSKGFPTNAIYGFLRMLFSLIKKERPQYLVVVFDAPA 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ R + DYK RP P+ L ++P ++ + G+P G EADD+ A LA K Sbjct: 62 KT--KREKIYADYKKQRPKAPDPLKVQIPVIKEILKLAGIPLLELPGYEADDVIAYLAEK 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 +Q G + I S DK QL+S + + + + K+FGV+PQ++PDY L G Sbjct: 120 FSQKGFKVKIYSPDKDLLQLVSENVLVINPMNDEVFTKERVIKKFGVEPQKIPDYLALVG 179 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR 233 VPG+ G+GPK+A +L ++ S+E I +N + R+ KE L + + Sbjct: 180 DKVDNVPGIEGVGPKTAINILKKYGSVENILKNWEKF---QREFPRAKKEDLELSYKLVK 236 Query: 234 LQTDLHIDGNLQQLRLVR 251 L TDL I+ + + L++ R Sbjct: 237 LYTDLDIELSEEDLKIKR 254 >UniRef50_UPI0001976BF8 DNA polymerase I n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976BF8 Length = 943 Score = 287 bits (735), Expect = 2e-76, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 17/261 (6%) Query: 4 HLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LL+VD +L R Q + V L Q++ +P H FD + Sbjct: 15 TLLVVDGHSLAFRAFFALPAENFSTQAGQATNAVWGFATMLSQVLDSEKPDHLAVAFDMK 74 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R++ LP YK R PE+L ++P ++ GV G E DD+ ATLA Sbjct: 75 GGT--FRNEMLPQYKGTREAAPEDLLTQLPLIQKMLTALGVTYVEKQGYEGDDIIATLAA 132 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIR----DYFQKRWLDAPFIDKEFGVQPQQLPDY 168 ++G+ ++S D+ QL+ + + + + + ++ ++ V P Q PD Sbjct: 133 MGERSGYDTLVLSGDRDAFQLIDERVTVLYPGHHFKDLKHMTPQAVEDKYHVGPAQYPDL 192 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G ++ +PGV G+G A + + ++ LEGI E+ D + K + L + E L Sbjct: 193 AALRGETADNIPGVPGVGDGFAAKWINQYGGLEGIIEHADEIGGKKGESLRENIEQVKLN 252 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 R + L+ D+ + ++ L Sbjct: 253 RKVNALRRDVDLGIGIEDLTF 273 >UniRef50_A9NF42 DNA polymerase I n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF42_ACHLI Length = 880 Score = 287 bits (735), Expect = 2e-76, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 125/265 (47%), Gaps = 21/265 (7%) Query: 3 VHLLIVDALNLIRRIHAVQG--------------SPCVETCQHALDQLIMHSQPTHAVAV 48 + +VD +++ R + + V +D++I S +H + Sbjct: 2 KKITLVDGNSILFRAYNATAYPGAKVLQTSTGIYTNAVFAFSGMIDKIIEISN-SHMLIA 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + RH+ DYKAGR MPEEL ++P + + G+ +S +G EADD+ Sbjct: 61 FDTGEPT--HRHKSYDDYKAGRKEMPEELGSQIPLIHELIKYLGIKEYSMAGYEADDIIG 118 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQ 164 TLA +AG++ + S+D QL++ + + + + + +G + Sbjct: 119 TLAKMAEKAGYKVDVFSSDYDLLQLVTEHITVHMLKKGMRVVETYTPETLKETYGFSHEL 178 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 D+ L G S +PGV G+G +A +L+ E+ +LE I N + + K + + T+KE Sbjct: 179 FIDFKALVGDKSDNIPGVPGVGEVTAKKLIAEYGTLENILNNAEHIKGKLGENIRTNKEQ 238 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 A ++++ + TD+ + +L+ ++ Sbjct: 239 AVFSKELSTILTDMPLPFDLEDTKV 263 >UniRef50_A6NVK8 DNA polymerase I n=2 Tax=Bacteria RepID=A6NVK8_9BACE Length = 889 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 19/261 (7%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + L+++D +++ R Q + V L +L+ +P FD Sbjct: 1 MKLMVIDGNSIVNRAFYGVHMLTTRDGQPTNAVYGFLTILQKLVDEEKPDALCCTFD--R 58 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +RH YKA R MP+EL +MP L+ + +P + G EADDL T++VK Sbjct: 59 KAPTFRHLAYEGYKAQRKGMPDELASQMPILKEVLDAMNIPRYEMDGWEADDLIGTISVK 118 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------RWLDAPFIDKEFGVQPQQLPD 167 AG +V+ DK QL++ R++ + + + + +G P + D Sbjct: 119 DAAAGWDTVVVTGDKDSLQLVTDRTRVKLVSTRMGQTTTKEMTPDTFRETYGFDPIHIID 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV--AEKWRKKLETHKEMA 225 L G +S +PGV G+G K+A L+ +QS+E IY +LD V KKL +E A Sbjct: 179 LKALMGDASDNIPGVKGVGEKTAMDLIQRYQSVEAIYADLDKVEAKPAVLKKLTEGREQA 238 Query: 226 FLCRDIARLQTDLHIDGNLQQ 246 + D+A ++TD +D + Sbjct: 239 MMSYDLATIRTDAPLDFKPED 259 >UniRef50_D0YSZ1 DNA polymerase I n=6 Tax=Actinobacteridae RepID=D0YSZ1_9ACTO Length = 1040 Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 18/264 (6%) Query: 1 MAV-HLLIVDALNLIRRIHAVQG-----------SPCVETCQHALDQLIMHSQPTHAVAV 48 M+ LL++D +L R + + V L ++ +PTH A Sbjct: 1 MSDLRLLVLDGHSLAFRAFYSRPPENFRTTTGVYTNAVHGFMSMLLAMLRREKPTHIGAA 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD S +R PDYK GR P E ++ ++ + G+ + EADD+ A Sbjct: 61 FDLSRHS--FRTDIYPDYKGGRAETPPEFLGQIENIQRLLDALGIKWLTMENVEADDILA 118 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDY----FQKRWLDAPFIDKEFGVQPQQ 164 TLA + G Q + S D+ QL+ + + Q + + ++GV P Q Sbjct: 119 TLATQGKAQGMQVLVSSGDRDTFQLIDESTTVLYPGHNAAQTTRMTPQAVKDKYGVWPAQ 178 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 P+ L G + +PGV +G KSA + ++ LEGI + + K + L H + Sbjct: 179 YPEVAALVGEKADNLPGVPLVGEKSAAAWINQYGGLEGILAHRGELKGKRGENLRAHVDD 238 Query: 225 AFLCRDIARLQTDLHIDGNLQQLR 248 R++ RL+TDLH+ L LR Sbjct: 239 VLRNRELNRLRTDLHLPLQLDDLR 262 >UniRef50_C4Z0G0 DNA polymerase I n=23 Tax=Bacteria RepID=C4Z0G0_EUBE2 Length = 894 Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 120/264 (45%), Gaps = 18/264 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ L+++D +++ R + + + L + + +P + FD Sbjct: 1 MSEKLILIDGHSILNRAFYGVPDLTNAEGIHTNAMYGFLNILFKFLDEEKPDYITVAFDL 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH+ YK R PM EL ++P ++ + + G EADD+ T+A Sbjct: 61 SAPT--FRHKVFDGYKGTRKPMQPELKQQVPLMKELLKAMNITVVEQEGYEADDILGTIA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLD------APFIDKEFGVQPQQL 165 + G +IVS D+ QL ++IR K+ + + +GV P + Sbjct: 119 KESAAKGIDVSIVSGDRDLLQLADEHIKIRIPKTKKGVTEVEDYYPSDVFNLYGVTPHEF 178 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEM 224 D L G +S +PG G+GPK+A+ ++ ++ SL+ ++E+L + K + + + E Sbjct: 179 IDVKALMGDTSDNIPGAPGVGPKTASAIIQKYHSLDNVFEHLCELKPPKAKISITENVEQ 238 Query: 225 AFLCRDIARLQTDLHIDGNLQQLR 248 + R ++ ++ D+ ID ++ + Sbjct: 239 IKMSRFLSEIKIDVPIDYKVEDSK 262 >UniRef50_D1VS49 DNA polymerase I n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VS49_9FIRM Length = 885 Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 131/265 (49%), Gaps = 17/265 (6%) Query: 1 MAVHLLIV-DALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFD 50 M+ ++ ++ D +L R + + L+ I +P+H V FD Sbjct: 1 MSKNIFLIIDGSSLFFRAFYALPLLKTKRGIYTNAIYGFVMMLENAIERVKPSHIVVCFD 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + ++ +R + DYK R P EL + P +R + + + EADD+A TL Sbjct: 61 RKGKT--FRSELYKDYKGTRQKTPNELEQQFPLVRDILKYMNIVVLDSPVYEADDIAGTL 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLP 166 ++ ++ G+++ +++ DK Y QL+ + + ++ I+ ++G+ PQ+ Sbjct: 119 SLIASKEGYKSYLLTGDKDYYQLVDDNTNVLMTRKGITELEVVNLQSINDDYGISPQEFI 178 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMA 225 D GL G SS +PGV GIGPK+ +L+ E+ ++E +Y +L ++ +K ++ LE +K A Sbjct: 179 DLKGLMGDSSDNIPGVPGIGPKTGLKLIKEYSTIENLYNHLSEISGKKLKENLEENKVQA 238 Query: 226 FLCRDIARLQTDLHIDGNLQQLRLV 250 F+ + + + ++ + L L++ Sbjct: 239 FMSKKLGTIVRNIDLPVGLSDLKIK 263 >UniRef50_Q21YU4 DNA polymerase I n=39 Tax=Betaproteobacteria RepID=Q21YU4_RHOFD Length = 957 Score = 286 bits (733), Expect = 4e-76, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 15/259 (5%) Query: 2 AVHLLIVDALNLIRRIHAVQG-------------SPCVETCQHALDQLIMHSQPTHAVAV 48 LL+VD + + R + + + L L +A + Sbjct: 12 PKTLLLVDGSSYLYRAFHAMPDLRAVPGDPSSAPTGAIRGMINMLQSLRKEVPADYAACI 71 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FDD+ + +R P+YKA R PMP++L ++ + G + G EADD+ Sbjct: 72 FDDKGPT--FRDALYPEYKAHRSPMPDDLRSQIEPIHEVVRLMGWKVLAVPGVEADDVIG 129 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 TLAV + G + + S DK QL++ + I D R D ++ EFGV PQ + D+ Sbjct: 130 TLAVTAARQGIEVIVSSGDKDLAQLVNSHITIIDTMNGRRRDVAGVEAEFGVPPQLMVDF 189 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G VPGV +GPK+A + L E+ SL+ + N D + + L+ + L Sbjct: 190 QTLVGDVIDNVPGVPKVGPKTAAKWLQEYGSLDAVVANADQIKGVVGENLKKSLDWLPLG 249 Query: 229 RDIARLQTDLHIDGNLQQL 247 R + ++TD +DG + L Sbjct: 250 RQLLTIKTDCDLDGWMPDL 268 >UniRef50_Q02DA6 DNA polymerase I n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02DA6_SOLUE Length = 865 Score = 285 bits (731), Expect = 7e-76, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 18/262 (6%) Query: 3 VHLLIVDALNLIRRIHAVQG--------------SPCVETCQHALDQLIMHSQPTHAVAV 48 L ++D I R + + + V + L +L P + A+ Sbjct: 8 QKLFLIDTFGFIFRAYHARARTGAPPMRTSTGFSTEAVYIFNNMLRKLSKQHDPPYVAAI 67 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 F E+ + R Q +YKA R P +L D++P +R E +P G EADD+ Sbjct: 68 F--ESGEATHRVQEFAEYKANRTETPPDLLDQIPFVRRVLEAMRIPILEYPGFEADDVIG 125 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQ-KRWLDAPFIDKEFGVQPQQLPD 167 T+ + G IVS+DK QL++ + + + + + + + GV P Q+ D Sbjct: 126 TITRRAEAEGLDVVIVSSDKDMLQLVTEHVSMLNPAKDDKLYNPEEVKTFMGVPPVQVAD 185 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHKEMAF 226 L G S +PG GIG K A Q+L +F S+E E V K +R+ L+ + + Sbjct: 186 LLALMGDSVDNIPGAPGIGDKGAKQILEKFGSIEAALERAAEVERKVYRESLQNNVDRIR 245 Query: 227 LCRDIARLQTDLHIDGNLQQLR 248 + + +A + TD+ I+ L ++ Sbjct: 246 MSKRLATISTDVPIEFTLDAVK 267 >UniRef50_A0JWM3 DNA polymerase I n=7 Tax=Actinobacteria (class) RepID=A0JWM3_ARTS2 Length = 955 Score = 285 bits (731), Expect = 8e-76, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 16/259 (6%) Query: 4 HLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LL++D ++ R Q + + L LI +PTH FD Sbjct: 67 RLLVLDGHSMAFRAFFALPADKFSTAAGQHTNAIHGFTSMLINLIKEQKPTHVAVAFDVS 126 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + + R +YK GR P E+ ++ + G+ G EADD+ ATLA Sbjct: 127 DET-THRKAEYSEYKGGRNETPREMSGQIDLIDKVMGAWGIKTIKMPGYEADDVLATLAA 185 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLPDY 168 +AG++ +V+ D+ QL++ + + + LDAP I +++ V P Q D Sbjct: 186 MGEKAGYEVLLVTGDRDAFQLITDNVFVLYPRKGVSDIPRLDAPAIQEKYFVSPAQYSDL 245 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G S+ +PGV G+GPK+A + + + LEG+ E+LD + K L + + Sbjct: 246 AALVGESADNLPGVPGVGPKTAAKWINLYGGLEGVLEHLDKIGGKVGDSLRENVDAVKRN 305 Query: 229 RDIARLQTDLHIDGNLQQL 247 R + RL TDL + L L Sbjct: 306 RRLNRLHTDLELPVTLDDL 324 >UniRef50_C4FFL7 Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=C4FFL7_9BIFI Length = 982 Score = 285 bits (731), Expect = 8e-76, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 17/261 (6%) Query: 4 HLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LL+VD +L R Q + V L Q+I +P H FD + Sbjct: 12 TLLVVDGHSLAFRAFFALPVENFSTSSGQATNAVWGFATMLAQVIDAEKPDHLAVAFDVK 71 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R+ LP YK R PE+L ++P +++ + GV G E DD+ TLA Sbjct: 72 GGT--FRNTMLPQYKGTRDAAPEDLLSQLPLIQSMLDALGVTYIEKPGYEGDDVIGTLAT 129 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIR----DYFQKRWLDAPFIDKEFGVQPQQLPDY 168 QA ++ ++S D+ QL+ + + + + + + ++ V P Q PD Sbjct: 130 MGEQAKYKTLVLSGDRDAFQLVDDWVTVLYPGHHFKDLKHMTPEAVFAKYKVTPAQYPDL 189 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G ++ +PGV G+G A + + ++ SLEGI E+ D + K + L + + L Sbjct: 190 AALRGETADNIPGVPGVGDGFAAKWINQYGSLEGICEHADEIGGKKGESLRENLDQVKLN 249 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 R + L D+ + + L Sbjct: 250 RKVNALVRDIDLGVTVDDLTF 270 >UniRef50_B0VJ17 DNA polymerase I n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ17_9BACT Length = 918 Score = 285 bits (730), Expect = 9e-76, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 132/261 (50%), Gaps = 15/261 (5%) Query: 1 MAVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 MA L ++D L+ R H + + ++ ++ ++Q + F Sbjct: 1 MAEKLYLIDGTALLYRAHFAFIKNPLINSKGIHTSAIFGVINSFLHILENTQAAYVAISF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D ++ +RH YKA RPPMP+EL ++ ++ FE G+ G EADD+ T Sbjct: 61 D--RKAPTFRHNLYEAYKAQRPPMPDELTAQIEPVKRFFELIGLKEIGLDGYEADDILGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 LA Q +++DK YCQL+ + D + LD + ++GV P+Q DY Sbjct: 119 LAKLYKDQ-FQIVFLTSDKDYCQLVDERSVMLDPMKDIVLDRDAVYAKYGVYPEQFIDYL 177 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G S +PGV+ IGPK+A LL E+Q+L+ IY NLD + + ++ L +KE A+L + Sbjct: 178 ALVGDPSDNIPGVSSIGPKTAAMLLSEYQTLDNIYANLDKLKPRLQEVLRENKENAYLSK 237 Query: 230 DIARLQTDLHID-GNLQQLRL 249 +A++ TD+ I +L+ L Sbjct: 238 QLAKIDTDVPIPKPDLEHLTF 258 >UniRef50_C3J9S9 DNA polymerase type I n=2 Tax=Bacteria RepID=C3J9S9_9PORP Length = 937 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 16/260 (6%) Query: 3 VHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 L ++DA LI R + + + ++L ++I +P + +FD Sbjct: 8 KRLFLLDASMLIYRAYFAFIHTPRFDSKGNNTSALLGFANSLIEIIKKEKPDYLAVIFDP 67 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 E S +RH+ YKA R PE + P ++ E +P EADD+ TL+ Sbjct: 68 EGGS--FRHREYTAYKAQRDATPEGILWAFPQVKRLLEALRIPAIEVPDYEADDVVGTLS 125 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK--RWLDAPFIDKEFG-VQPQQLPDY 168 + + G + +V+ DK Y QL++ + K + ++FG V Q+ DY Sbjct: 126 QRAEKEGFEVYMVTADKDYGQLVTEHALMYRPGTKGAEVWGEAEVCEKFGLVHCSQMVDY 185 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G +S +PG GIGPK A++LL +F S++ IYE+LD ++ +KKLE +E L Sbjct: 186 LALVGDASDNIPGCKGIGPKKASELLTQFGSIDAIYEHLDELSPSLKKKLEEGRENTLLS 245 Query: 229 RDIARLQTDLHIDGNLQQLR 248 R +A++ T++ ++ + R Sbjct: 246 RYLAKICTEVPMEVEWETFR 265 >UniRef50_A7NJD5 DNA polymerase I n=2 Tax=Roseiflexus RepID=A7NJD5_ROSCS Length = 972 Score = 285 bits (729), Expect = 1e-75, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 22/264 (8%) Query: 5 LLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 LL++D L R + + V A+ I QP +A FD Sbjct: 8 LLLIDGHALAYRAFHALAEAGLRSSTGEPTYAVYGFTSAMLNAIEEYQPEYAAVAFDVGK 67 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +R +YKA R P E ++ ++ +P ++ G EADD+ TLA + Sbjct: 68 ---TFRDDLYAEYKANRAETPAEFEQQLERIKQVLAAFDIPIYTAEGYEADDVIGTLARQ 124 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRI-------RDYFQKRWLDAPFIDKEF-GVQPQQL 165 T+ G I++ D QL+ + + R + + + G++P QL Sbjct: 125 ATERGVDVLILTGDTDTLQLVDDHVTVLLNNPYLRGPKNTTRYGVAEVTERYKGLRPHQL 184 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 D GL G S +PGV GIG A LL +F ++E +Y++LD ++++K LE +++A Sbjct: 185 ADLRGLKGDPSDNIPGVKGIGEAGAIALLNQFGTIENLYDHLDEAPKRYQKHLEGQRDIA 244 Query: 226 FLCRDIARLQTDLHIDGNLQQLRL 249 + +A + D + NL L Sbjct: 245 LFSKKLATIVCDAPVTLNLADATL 268 >UniRef50_B2UNN5 DNA polymerase I n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNN5_AKKM8 Length = 945 Score = 285 bits (729), Expect = 1e-75, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 125/263 (47%), Gaps = 19/263 (7%) Query: 2 AVHLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFD 50 + L I+D + L R H + V + L ++ H +PTH A FD Sbjct: 6 SKRLFILDGMALAYRAHFAFFSNPIRNSKGVNTSAVYGFANTLLGILEHERPTHIAACFD 65 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 ++ RH+ P YKA R MPEEL D+MP + E +P G EADD TL Sbjct: 66 TSAPTA--RHKLYPAYKANRESMPEELSDQMPLIFRLLEAMNIPILRYEGYEADDTIGTL 123 Query: 111 AVKVTQ-AGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQP-QQ 164 A G Q +VS DK QL+S T + ++ +D + +++G++ Q Sbjct: 124 ARIADGTEGFQTYMVSQDKDLGQLISSTCFLWKPGKRGNDHEVIDLAKLKEQWGIERADQ 183 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + D L G SS +PG+ G+G K+A L+ EF S+E + N D + K ++ +E + M Sbjct: 184 VVDILALMGDSSDNIPGLPGVGEKTAKLLIGEFGSVENLLSNTDKLKGKRKQIVEENGAM 243 Query: 225 AFLCRDIARLQTDLHIDGNLQQL 247 A L + +A + ++ + L +L Sbjct: 244 ATLSKQLATIDRNVPLTVTLPEL 266 >UniRef50_B6G9J6 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6G9J6_9ACTN Length = 932 Score = 285 bits (729), Expect = 1e-75, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 17/260 (6%) Query: 5 LLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 + ++D +L+ R + V + +++ P V FD + Sbjct: 14 IAVIDGNSLMHRAFHAVPPTMNAPDGSPTNAVFGFLNMFLKMVDEFSPDGVVCAFDKGH- 72 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 R + LP YKA RPPM L + P ++ VP G E DD+ TLA + Sbjct: 73 -PKVRMEMLPQYKAQRPPMDPNLRAQFPMIKELLASLSVPVVELEGWEGDDILGTLARRG 131 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEF-GVQPQQLPDYW 169 AG +V+ D+ QL++ + + + + +D + G+ P+ +PD++ Sbjct: 132 EAAGCDMYLVTGDRDMYQLVTDHVHVVSTRKGLSDIAIMTPESVDDLYHGITPELVPDFY 191 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 GL G SS +PGV GIGPK A+ L+V++ SL+ + + D V K + L H + A + R Sbjct: 192 GLKGDSSDNIPGVPGIGPKKASALIVQYGSLDEVIAHADEVKGKMGESLRAHIDDALVSR 251 Query: 230 DIARLQTDLHIDGNLQQLRL 249 IA + TD ++ +L ++ Sbjct: 252 KIATIMTDAPVECDLDEVSF 271 >UniRef50_C2D755 DNA-directed DNA polymerase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D755_9ACTN Length = 1030 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 17/258 (6%) Query: 2 AVHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 + ++D +L+ R + + + + L +L+ P + FD Sbjct: 67 TKTIAVIDGNSLMHRAFHAIMQPMSAPDGRSTNALLGFFNMLIKLVRSFSPDGIICAFDK 126 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 R LP YKA RPPM LH++ P ++ +P G E DD+ TLA Sbjct: 127 GK--PQVRIDMLPQYKAQRPPMDPSLHEQFPMVKELLRALQIPVVELQGWEGDDILGTLA 184 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEF-GVQPQQLP 166 + G+ + + D+ QL + + + + R + +D + G+ P +P Sbjct: 185 HQGELQGYSMLLFTGDRDIYQLATEHVSVVSTKKGVSDVRIMTPEDVDDLYHGITPNLVP 244 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D++GL G +S +PGV GIGPK A L+VE+ SLEG+ + D V+ K + L H + A Sbjct: 245 DFYGLKGDTSDNIPGVPGIGPKRAAALIVEYGSLEGVIAHADQVSGKMGENLRNHIDDAR 304 Query: 227 LCRDIARLQTDLHIDGNL 244 L + +A ++ D I +L Sbjct: 305 LSKRVATIRRDAPITVDL 322 >UniRef50_B0S404 DNA polymerase I n=2 Tax=Finegoldia magna RepID=B0S404_FINM2 Length = 875 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 129/267 (48%), Gaps = 19/267 (7%) Query: 1 MAVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ LI+D +L+ R + V + ++ P V FD Sbjct: 1 MSKKALIIDGSSLLFRGFYAIRDLTTKDGIHTNGVFGFMNMYYSVMGKINPDLVVVCFD- 59 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH++ +YK R PEEL + L+ + GV G EADD+A TLA Sbjct: 60 -RKEPTFRHEKYSEYKGNRQETPEELIGQFDMLKELLKAMGVSYIDLKGYEADDIAGTLA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 + + + +++ DK Y QL+ ++ + + D + +E+G+ P+Q+ D Sbjct: 119 KQASSKDYDVYLLTGDKDYLQLIDDNTKVVLTKRGITETKIYDVDVLKEEYGITPKQMID 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW-RKKLETHKEMAF 226 GL G S +PG+ G+G K+A + + ++ S+EG+YE++D ++ K ++K+ +++A+ Sbjct: 179 LKGLMGDKSDNIPGIDGVGEKTALKYIQKYGSIEGLYEHVDEISGKKTKQKVIDGEDIAY 238 Query: 227 LCRDIARLQTDLHID---GNLQQLRLV 250 L R++ + TD+ D ++ + Sbjct: 239 LSRELGTINTDVPEDLMGFGIEDCTIK 265 >UniRef50_B1GZ14 DNA polymerase I n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZ14_UNCTG Length = 908 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 76/256 (29%), Positives = 118/256 (46%), Gaps = 12/256 (4%) Query: 3 VHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 I+D I R + V L ++ +P + FD + Sbjct: 2 KKFFIIDGNAYIHRAYHALPPLSTSNNRQVNAVYGFVKLLLKIKNSFKPDYMAVCFDYPS 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH+ DYKA R P+ + L +MP R A + V G EADDL AT+ Sbjct: 62 K--NFRHEIFKDYKANRKPLDKALISQMPIAREAVKALNVVGIEIKGYEADDLIATVTGN 119 Query: 114 VTQAGHQATIVSTDKGYCQLL-SPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 +G Q IV+ DK QL T+ I +Y + D +++++GV P+QL D + L Sbjct: 120 NKGSGVQTVIVTGDKDILQLAEDETVLIWNYSKDIMYDTKKVEEKYGVAPKQLSDIFALM 179 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIA 232 G +S +PG+ GIG K+A +L+ +F +LE + +N D+V K L KE A L R + Sbjct: 180 GDASDNIPGIKGIGEKTAVKLIEKFGNLENVLQNADSVKGNMGKLLSHGKEQALLSRKLI 239 Query: 233 RLQTDLHIDGNLQQLR 248 L + +D L + Sbjct: 240 ELNRRVPLDYKLGEFE 255 >UniRef50_D1CFH6 DNA polymerase I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFH6_THET1 Length = 930 Score = 284 bits (727), Expect = 2e-75, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 125/259 (48%), Gaps = 19/259 (7%) Query: 2 AVHLLIVDALNLIRRIHAVQG----------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 AV ++++DA +LI R + + + + L Q+I P FD Sbjct: 6 AVKVVLIDAYSLIYRAYHALPSDLATSKGEKTNAIYGFCNMLVQVINRENPDSIAVAFDV 65 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 +RH +YKA R PMP++L ++ +R +P + G EADD+ +LA Sbjct: 66 GK---AFRHDEFVEYKAQRAPMPDDLQAQIGRVRQVIAAFDIPVYEVPGYEADDVIGSLA 122 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW-----LDAPFIDKEFGVQPQQLP 166 K++ GHQ IV+ DK + QL+S ++ + + R+ + ++G P+ + Sbjct: 123 KKLSSQGHQVVIVTGDKDFLQLVSDSVSVVLPARGRFSEVQVYTPDLVRLQYGFDPRYIV 182 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMA 225 D+ L G +S +PGV G+G K+A L+ F SL+ I EN+D++ + R ++ H+ Sbjct: 183 DFKALMGDASDNIPGVPGVGEKTARSLIQTFGSLQNILENVDSIKPERIRNAIKEHQSQL 242 Query: 226 FLCRDIARLQTDLHIDGNL 244 +A + TD+ +D Sbjct: 243 IQNLRLATIVTDIDVDIEP 261 >UniRef50_D1PTJ0 DNA-directed DNA polymerase I (Fragment) n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PTJ0_9BACT Length = 661 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 18/263 (6%) Query: 3 VHLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 L ++DA +I R + + + + L+++I PTH FD Sbjct: 2 EKLFLLDAYAIIFRSYYAFIKRPTINSKGLNTSAILGFCNTLNEIIEKENPTHIGVAFDY 61 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 +RH+ P YKA R PE++ +P ++ + +P +G EADD+ TLA Sbjct: 62 GK---TFRHEAFPPYKAQREATPEDIKLSVPHIQDILKAMHIPILQVNGFEADDVIGTLA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLD---APFIDKEFGV-QPQQLPD 167 + + G + +++ DK Y QL+ + + D I ++G+ Q+ D Sbjct: 119 TQAAEKGIETYMLTPDKDYGQLIRQHVYMFRPRHGGGYDKIGEKEIQAKYGIASAAQVID 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 L G SS PG G+G K+A +L+ EF + E + EN D + K R+K+E + + Sbjct: 179 LLALMGDSSDNYPGCPGVGEKTAVKLIHEFGTCENLIENSDQLKGKMREKVENAVDDIKM 238 Query: 228 CRDIARLQTDLHIDGNLQQLRLV 250 + +A ++TD+ I+ NL +L++ Sbjct: 239 SKFLATIRTDVPIELNLDELKMT 261 >UniRef50_O08307 DNA polymerase I n=4 Tax=Chloroflexi (class) RepID=DPO1_CHLAA Length = 942 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 75/268 (27%), Positives = 125/268 (46%), Gaps = 22/268 (8%) Query: 1 MAVHLL-IVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAV 48 MA LL +VD L R + + V L + +P +A Sbjct: 1 MAYPLLVLVDGHALAYRAFFALRESGLRSSRGEPTYAVFGFAQILLTALAEYRPDYAAVA 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD +R +YKAGR PEE + + ++ + +P ++ G EADD+ Sbjct: 61 FDVGR---TFRDDLYAEYKAGRAETPEEFYPQFERIKQLVQALNIPIYTAEGYEADDVIG 117 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI--RDYFQKR----WLDAPFIDKEF-GVQ 161 TLA + T+ G I++ D QL++ +R+ + + + D + K + G++ Sbjct: 118 TLARQATERGVDTIILTGDSDVLQLVNDHVRVALANPYGGKTSVTLYDLEQVRKRYDGLE 177 Query: 162 PQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETH 221 P QL D GL G +S +PGV GIG K A LL +F+SL+ + E +DA ++++ L Sbjct: 178 PDQLADLRGLKGDTSDNIPGVRGIGEKGAIALLKQFRSLDALLEQIDAAPKRYQTLLREQ 237 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLRL 249 E A R +A + TD+ + +L+ R+ Sbjct: 238 AEAARFSRQLATIVTDVPVQLDLEAARI 265 >UniRef50_Q2GBP7 DNA polymerase I n=10 Tax=Alphaproteobacteria RepID=Q2GBP7_NOVAD Length = 945 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 82/270 (30%), Positives = 121/270 (44%), Gaps = 22/270 (8%) Query: 2 AVHLLIVDALNLIRRIHA-------VQGSP--CVETCQHALDQLIMHSQ----PTHAVAV 48 HL +VD I R + +G P V L +L PTH + Sbjct: 4 KQHLYLVDGSAYIFRAYHRLPPLTNPRGVPVGAVYGYTTMLWKLAEDLHKADGPTHLAVI 63 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 D + +R+ YKA RPP PE+L + P +R A + C EADDL A Sbjct: 64 LDKAG--TSFRNDLYDQYKANRPPPPEDLVPQFPLIRDATRAFSLACIEEDALEADDLIA 121 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSP------TLRIRDYFQKRWLDAPFIDKEFGVQP 162 + A T G TIVS+DK QL+ + + D + + +D P + ++FGV P Sbjct: 122 SYARAATLRGWDVTIVSSDKDLMQLVGKCATGGGCIDMLDTMKNQRIDIPEVVEKFGVPP 181 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETH 221 +++ D L G S VPG+ GIGPK+AT+L+ E LE + K R+ L Sbjct: 182 EKVGDVLALMGDSVDNVPGIRGIGPKTATKLIQEHGDLESALAAAPTMKAGKLRESLIEQ 241 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLRLVR 251 EMA L R + L+ D + ++ +L + Sbjct: 242 AEMARLSRVLVALKEDCPLPVPIEDFKLGQ 271 >UniRef50_Q1D7R1 DNA polymerase I n=4 Tax=Myxococcaceae RepID=Q1D7R1_MYXXD Length = 908 Score = 283 bits (725), Expect = 3e-75, Method: Composition-based stats. Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 12/256 (4%) Query: 2 AVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 A L+++DA I R + + V + + + +PTH FD E Sbjct: 10 APTLVLIDASGFIFRAYHAIPPLTTSKGVQTNAVLGFTRMVLKALRELKPTHVALAFDKE 69 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +R+ R + P YKA R PE+L + +R E VP +G EADD+ TLAV Sbjct: 70 SRTE--RQKIDPTYKANREGPPEDLVPQFALIRRVVEAINVPVLEVAGWEADDVIGTLAV 127 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 K Q G +V+ DK + Q++ +R+ D + + G++P Q+ DY L Sbjct: 128 KAKQEGFCVQVVTGDKDFVQIVDDDVRLYDPMKDVHTLPADVKARLGIEPGQMRDYLALI 187 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDI 231 G + VP V GIGPK+AT+L+ +F +E + LD V + K R+ + +H+E + + Sbjct: 188 GDAVDNVPKVPGIGPKTATELIQQFGDVETLLSRLDEVKKPKIRENIASHRESLLRAKVL 247 Query: 232 ARLQTDLHIDGNLQQL 247 +TDL +D + L Sbjct: 248 VTFKTDLSLDVRMADL 263 >UniRef50_A7HD60 DNA polymerase I n=2 Tax=Cystobacterineae RepID=A7HD60_ANADF Length = 899 Score = 283 bits (725), Expect = 4e-75, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 118/272 (43%), Gaps = 24/272 (8%) Query: 1 MAVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L ++D + R + + V L + + PTH V V D Sbjct: 1 MP-TLTLIDGSGFVFRAYHAIPHLSTTRGTPTNAVYGFTTMLLKALREHAPTHVVLVMDA 59 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 +S +R++ P YKA RP P++L + P +R + VP G EADD+ ATLA Sbjct: 60 GRKS--FRNEIDPAYKANRPEAPDDLQVQFPLVREVADALAVPRIEEPGVEADDVIATLA 117 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYF-----QKRWLDAPFIDKEFGVQPQQLP 166 + + G + +V+ DK + QL+ L + D + W ++K+ GV+P Q+ Sbjct: 118 SRAREQGWEVVVVTGDKDFGQLVDERLSLYDPMAEASGRGGWTGPGEVEKKLGVRPDQVI 177 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-------KWRKKLE 219 +Y + G VPG+ GIG +A L+ F ++E + + + K ++K+ Sbjct: 178 EYMAILGDKIDNVPGIPGIGEVTAAALVRHFGTVEEMLRRPEEIKAALSRGGEKVKEKIV 237 Query: 220 THKEMAFLCRDIARLQTDLHIDGNLQQLRLVR 251 +E R + L+ DL + Q R Sbjct: 238 ASEERIRKNRQLVSLRRDLVLPFAPGQFERRR 269 >UniRef50_C2BWF0 DNA-directed DNA polymerase n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWF0_9ACTO Length = 932 Score = 283 bits (725), Expect = 4e-75, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 17/262 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQG-----------SPCVETCQHALDQLIMHSQPTHAVAVFD 50 LL++D +L R + + V L +I +PTH A FD Sbjct: 3 KKRLLVLDGHSLAFRAFFSRDPEHFRTSTGVYTNAVHGFFSMLLTMIRAEKPTHIGAAFD 62 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 S +R PDYK GR P E ++ ++ G+ + EADD+ ATL Sbjct: 63 LSRHS--FRTDIYPDYKGGRAETPPEFIGQVENIQKMLSAMGIKWLTEPNVEADDILATL 120 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDY----FQKRWLDAPFIDKEFGVQPQQLP 166 A K T++G + + S D+ QL+S + + + + + + + V PQQ P Sbjct: 121 ATKGTKSGMEVLVSSGDRDSFQLISDDVTVLYPGRSISETKRMTPQAVKDRYDVWPQQYP 180 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 + L G + +PGV +G K A + E+ SL+ + E+ D + K + L H + Sbjct: 181 EIAALVGEHADNLPGVPLVGEKVAASWINEYGSLDSLLEHRDELKGKRGENLRQHIDDVL 240 Query: 227 LCRDIARLQTDLHIDGNLQQLR 248 R + RL+TDL + +L+ L Sbjct: 241 RNRQLNRLRTDLQLPLSLEDLH 262 >UniRef50_C8W7U1 DNA polymerase I n=3 Tax=Coriobacteriaceae RepID=C8W7U1_ATOPD Length = 912 Score = 283 bits (724), Expect = 4e-75, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 17/261 (6%) Query: 4 HLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + ++D +L+ R G+P + + +L+ P + FD Sbjct: 29 TIAVIDGNSLMHRAFHAIRQPMAAPDGTPTGALFGFFNMFIKLVESFSPDGVICAFDKGK 88 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 R LP YKA RPPM LH + P ++ + VP G E DD+ TLA + Sbjct: 89 --PQIRIDMLPQYKAQRPPMDPALHAQFPVVKELLKTLDVPVCQLEGWEGDDILGTLARR 146 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEF-GVQPQQLPDY 168 G+Q + + D+ QL + ++I + + + + G+ P+ +PD+ Sbjct: 147 GEAEGYQMLLFTGDRDMYQLSTENVKIVSTRKGVSDVSIMTPETVADLYAGITPELVPDF 206 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 +GL G SS +PGV GIGPK A L+VE+ SL+ + + D V K + L H + A L Sbjct: 207 YGLKGDSSDNIPGVPGIGPKKAAALIVEYGSLDEVIAHADEVKGKVGENLRAHIDDALLS 266 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 R +A ++TD +D NL + Sbjct: 267 RKVATIRTDAPLDINLDDAKF 287 >UniRef50_B1WPN5 DNA polymerase I n=13 Tax=Bacteria RepID=B1WPN5_CYAA5 Length = 970 Score = 283 bits (724), Expect = 5e-75, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 126/272 (46%), Gaps = 28/272 (10%) Query: 5 LLIVDALNLIRRIHAV--------------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 L+++D +L R + + ++L Q I P + FD Sbjct: 10 LMLIDGHSLAFRAYYAFAKARKGPLRTSTGIPTSVCFGFLNSLIQAIKLENPQYIAIAFD 69 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +RH+ +YKA R PE+ ++ L+ E + + G EADD+ T+ Sbjct: 70 S--KEPTFRHEADVNYKADRKETPEDFIPDILNLQRLLEALNITIITAPGYEADDVLGTV 127 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR------------WLDAPFIDKEF 158 A K +Q G++ IVS D+ QL++ + + +R + + ++ Sbjct: 128 ATKGSQEGYRVKIVSGDRDLFQLVNDDNHLSVLYLERNAVKSSSGEGYTEFNVEAVTEKM 187 Query: 159 GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL 218 G++P Q+ DY L G S +PGV GIG K+A +LL E+ +LE +Y N++ + +KKL Sbjct: 188 GIKPTQVIDYKALCGDKSDNIPGVRGIGEKTAVKLLSEYGTLEAVYNNIEEIKGANQKKL 247 Query: 219 ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 + K+ A + +A + TD ++ +++ L Sbjct: 248 KEGKKEAEHSQYLAEIVTDAPLEFQIERCELK 279 >UniRef50_B1C859 DNA polymerase I n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C859_9FIRM Length = 888 Score = 283 bits (724), Expect = 5e-75, Method: Composition-based stats. Identities = 67/259 (25%), Positives = 132/259 (50%), Gaps = 15/259 (5%) Query: 1 MAVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M L+I+DA ++I + + V + + +LI +P + A FD Sbjct: 1 MKKKLVIIDAYSIIYKCFFGVRPMHSPKGISTNAVYGFLNIILKLISDEKPNYLYAAFDK 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ +RH + DYKAGR MPEEL +++P + + + EADD+ +++ Sbjct: 61 GHK--NFRHDKYADYKAGRQSMPEELREQIPYIERLLDAANIISLKVDDYEADDIIGSVS 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 + G +++ D+ QL+S +I + ++ ++ +++ + P+Q+ D Sbjct: 119 EVADKEGIDTVVITGDRDSFQLVSEHTKILYSKRGISDIEVINEDYLKEKYNLTPKQMID 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 L G S +PGV G+G K+A LL ++ L+G+YE+++ + K ++KL K+ AFL Sbjct: 179 LKALMGDKSDNIPGVKGVGEKTALNLLEKYSDLDGVYEHIEEIKGKLQEKLINDKDNAFL 238 Query: 228 CRDIARLQTDLHIDGNLQQ 246 +D+ ++ ++ ID +L + Sbjct: 239 SKDLGTIEVNMDIDLDLNE 257 >UniRef50_B8DUU4 DNA polymerase I n=16 Tax=Bifidobacterium RepID=B8DUU4_BIFA0 Length = 960 Score = 282 bits (723), Expect = 7e-75, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 116/263 (44%), Gaps = 17/263 (6%) Query: 4 HLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LL++D +L R Q + V L Q+I +P FD + Sbjct: 11 TLLVIDGHSLAFRAFYALPAENFSAKDGQATNAVYGFFTMLSQVIASQKPDLLGVAFDVK 70 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R++ L YK R PEEL ++P ++ E GV + G E DD+ ATLA Sbjct: 71 GGT--FRNKMLTQYKGTREAAPEELISQIPLIQDMLEAFGVTYVTKQGYEGDDVIATLAT 128 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 A ++ ++S D+ QL+ + + + + + + ++ ++ V P+Q PD Sbjct: 129 MGEHADYRTYVLSGDRDAFQLIDDDITVLYPGYHFKELKAMTPQAVEDKYHVTPRQYPDL 188 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G ++ +PGV G+G A + + ++ L+G+ E+ D + K L E L Sbjct: 189 AALRGETADNIPGVPGVGDGFAAKWINQYGGLDGVIEHADEIKGKKGDALRESIEQIRLN 248 Query: 229 RDIARLQTDLHIDGNLQQLRLVR 251 R + L DL + ++ L + Sbjct: 249 RKVNALVRDLDLGVDIADLTFGK 271 >UniRef50_P46835 DNA polymerase I n=51 Tax=Actinobacteridae RepID=DPO1_MYCLE Length = 911 Score = 282 bits (722), Expect = 9e-75, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 17/261 (6%) Query: 5 LLIVDALNLIRRIHAVQGS-----------PCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L+++D +L R + V L L+ PTH A FD Sbjct: 18 LMLLDGNSLAFRAFYALPTENFKTRGGLTTNAVYGFTAMLINLLREEAPTHIAAAFDVSR 77 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R + YKA R +P E H ++ + G+ ++ +G EADDL ATLA + Sbjct: 78 KT--FRSECYAGYKANRSSIPAEFHGQIDITKEVLGALGITVFAEAGFEADDLIATLATQ 135 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 G++ +V+ D+ QL+S + + + + +++GV P Q PD Sbjct: 136 AENEGYRVLVVTGDRDALQLVSNDVTVLYPRKGVSELTRFTPEAVIEKYGVTPAQYPDLA 195 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G S +PG+ G+G K+A + +V++ SL+G+ +N+++V K + L TH R Sbjct: 196 ALRGDPSDNLPGIPGVGEKTAAKWIVDYGSLQGLVDNVESVRGKVGEALRTHLASVVRNR 255 Query: 230 DIARLQTDLHIDGNLQQLRLV 250 ++ L D+ + LRL Sbjct: 256 ELTELVKDVPLVQTSDTLRLQ 276 >UniRef50_Q1JIU7 DNA polymerase I n=14 Tax=Streptococcus RepID=Q1JIU7_STRPD Length = 880 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 22/268 (8%) Query: 2 AVHLLIVDALNLIRRIHAVQ-------------GSPCVETCQHALDQLIMHSQPTHAVAV 48 LL++D ++ R + + LD ++ QPTH + Sbjct: 4 KNKLLLIDGSSVAFRAFFALYNQIDRFKNHSGLHTNAIYGFHLMLDHMMKRVQPTHVLVA 63 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + +R + DYKAGR P+E ++ P +R G+ + EADD+ Sbjct: 64 FDAGKTT--FRTEMYADYKAGRAKTPDEFREQFPYIREMLTALGIAYYELEHYEADDIIG 121 Query: 109 TLAVKVTQAG--HQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQP 162 TL + TIVS DK QL + + ++ ++ G+ P Sbjct: 122 TLDKMAERTEVPFDVTIVSGDKDLIQLTDENTVVEISKKGVAEFEEFTPAYLMEKMGLTP 181 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETH 221 Q D L G S +PGV IG K+ +LL EF SLEGIYE++D K ++ L Sbjct: 182 NQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSLEGIYEHIDGFKASKMKENLIND 241 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLRL 249 ++ AFL + +A + T I L + Sbjct: 242 RDQAFLSKTLATINTASPITIGLDDIVY 269 >UniRef50_A6KZN3 DNA polymerase I n=15 Tax=Bacteroides RepID=A6KZN3_BACV8 Length = 971 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 17/261 (6%) Query: 3 VHLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 L ++DA LI R + + V + L++++ PTH FD Sbjct: 2 DKLFLLDAYALIYRAYYAFIKSPRINSKGFNTSAVLGFVNTLEEVLKKENPTHIGVAFDP 61 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH+ YKA R PE + +P ++ +P G EADD+ TLA Sbjct: 62 AGPT--FRHEAYEQYKAQREETPEVIRLSVPIIKDIIRAYRIPILEVPGYEADDVIGTLA 119 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK---RWLDAPFIDKEFGV-QPQQLPD 167 + + G +++ DK Y QL+ + + + + +F + P Q+ D Sbjct: 120 TEAGKRGITTYMMTPDKDYGQLVGGNVFMYRPKHTGGFEVMGIEEVKAKFDIQSPAQVID 179 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 GL G SS +PG G+G K+A +L+ ++ S+E + + + + K+ET+++M Sbjct: 180 MLGLMGDSSDNIPGCPGVGEKTAQKLIAQYGSIENLLSHSAELKGALKTKVETNRKMIEF 239 Query: 228 CRDIARLQTDLHIDGNLQQLR 248 + +A ++ D+ I N+ +L+ Sbjct: 240 SKFLATIKIDVPIALNMDELK 260 >UniRef50_B0PCZ2 DNA polymerase I n=3 Tax=Clostridiales RepID=B0PCZ2_9FIRM Length = 874 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 120/264 (45%), Gaps = 19/264 (7%) Query: 2 AVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 AV LL VD +++ R + + + L +++ ++P FD Sbjct: 6 AVKLLAVDGNSILNRAYYGIKALTTKNGEFTNGIYGFLSILLRVLDEAEPDAVAVAFDL- 64 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 R+ +RH+ YKA R MP EL ++ L+ G + G EADD+ TLA Sbjct: 65 -RAPTFRHKLYDGYKAQRKGMPHELASQLEPLKELLGALGFQIVTCEGYEADDILGTLAR 123 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------RWLDAPFIDKEFGVQPQQLP 166 + G I + D+ QL+ P + +R K D + +++GV+P QL Sbjct: 124 SSAETGWDCVIATGDRDSLQLVGPHVSVRLATTKMGQPASTLYDETAVREKYGVEPAQLV 183 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD--AVAEKWRKKLETHKEM 224 D L G +S +PGVAGIG K+A L+ ++ ++ IY LD + RKKL KEM Sbjct: 184 DVKALMGDASDNIPGVAGIGEKTALSLIGQYHDIDAIYAQLDTLEIKPGVRKKLGEGKEM 243 Query: 225 AFLCRDIARLQTDLHIDGNLQQLR 248 A+ R + + D ID + R Sbjct: 244 AYTSRKLGEICCDAPIDASPAAYR 267 >UniRef50_UPI0001744922 DNA polymerase I n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744922 Length = 971 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 19/265 (7%) Query: 2 AVHLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFD 50 L ++D++ L+ R H + + +AL ++ + +PTH A FD Sbjct: 6 PQRLFLLDSMALLYRAHFALIRKPIFTSDGVNTSALFGYANALLDILQNQKPTHLGAAFD 65 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + RH P YKA R MPE+L +PA + + +P G EADD+ TL Sbjct: 66 TSAPTP--RHTMFPAYKAQREEMPEDLSVAIPAAKRLLKAMRIPVLEVDGWEADDIIGTL 123 Query: 111 AVKVTQAG-HQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQ-PQQ 164 A G + +V+ DK + QL++ I ++ L + + +GV P Q Sbjct: 124 AHHAEARGGFETYMVTPDKDFGQLVTENTLIYKPGRQGADTEILGVKEVCERWGVSNPGQ 183 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + D GL G +S +PG+AG+G K+A +L+ +F S+E + + +D + K + K++ EM Sbjct: 184 VIDLLGLMGDASDNIPGIAGVGEKTAAKLIQQFGSVEAMLDRVDEIEGKLKDKVKAGAEM 243 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 A + + +A + D + L L L Sbjct: 244 ARISKQLATIMVDAPLTVQLDDLAL 268 >UniRef50_A8R8A1 DNA polymerase I n=2 Tax=unclassified Erysipelotrichaceae RepID=A8R8A1_9FIRM Length = 861 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 126/262 (48%), Gaps = 20/262 (7%) Query: 3 VHLLIVDALNLIRRIHAVQ------------GSPCVETCQHALDQLIMHSQPTHAVAVFD 50 LL++D +++ R + + V +++ + P + +D Sbjct: 2 EKLLLIDGNSMLFRAYYATLYGRMMTTSNGIPTNAVYGFITMVNKALDMIDPDYVFVAWD 61 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +RH +YK R + +EL + P +R + G+ + G EADD+ ++ Sbjct: 62 AGKPT--FRHTTYKEYKGTRKELDKELIVQFPIVREYLDAAGIKRYECEGIEADDIIGSI 119 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLP 166 A + I+S+D+ QL+ PT + + +D + + + + PQQ+ Sbjct: 120 AKQ--HPELAIHILSSDRDLLQLIDPTTDVYLMKKGISEIEVMDEAQLMETYTLCPQQII 177 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D L G S+ +PGV GIG K+A +LL E+QS++ +YE++ + K ++KLE KE AF Sbjct: 178 DLKALMGDSADNIPGVKGIGEKTAIKLLKEYQSVDNVYEHIAEIKGKLKEKLENGKESAF 237 Query: 227 LCRDIARLQTDLHIDGNLQQLR 248 L + +A ++TD I +++ + Sbjct: 238 LSKFLATIKTDAKIPVDMKTCK 259 >UniRef50_D2RAL7 DNA-directed DNA polymerase n=2 Tax=Gardnerella vaginalis RepID=D2RAL7_GARVA Length = 1025 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 17/261 (6%) Query: 4 HLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LL+VD +L R Q + + L Q++ +P FD + Sbjct: 19 TLLVVDGHSLAFRAFFAISADNFSTRSGQATNSIWGFITMLSQVVKKEKPDRLAIAFDVK 78 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R+ LP YK R P+EL ++P ++ + GV G E DD+ TLAV Sbjct: 79 GGT--FRNTMLPQYKGTRDAAPQELLSQLPIIQQMLKALGVTYIEKPGYEGDDVIGTLAV 136 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIR----DYFQKRWLDAPFIDKEFGVQPQQLPDY 168 + AG++ ++S D+ QL+ + + + + +D + +++ V P+Q PD Sbjct: 137 MGSNAGYRTLVLSGDRDAFQLIDDNITVLYPGQHFKDLKEMDKNAVYEKYHVTPKQYPDL 196 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G ++ +PGV G+G A + + +F SLE I E+ + ++ K + L + + L Sbjct: 197 AALRGETADNIPGVPGVGDGYAAKWINQFGSLENIIEHSNEISGKKGEALRENIDQVRLN 256 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 R + L DL + + L Sbjct: 257 RKVNALVCDLDLGVTVDDLCF 277 >UniRef50_B5YG86 DNA polymerase I n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG86_THEYD Length = 838 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 13/258 (5%) Query: 5 LLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 + +VD I R + + + L +L+ + + FD + + Sbjct: 4 IYLVDGSCFIYRAYHAIKGLSTSRGIPTNAIYGFTRMLLKLLREKNVKYILCAFDSPHPT 63 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 RH+ +YK RP P++L ++ ++ + G+ G EADD+ AT + Sbjct: 64 --KRHKIYEEYKITRPETPKDLPVQIDYIKQIIDALGITRIEVPGYEADDIIATAVGVIN 121 Query: 116 Q-AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 Q A I+S DK QL+S ++I D + +D ++ K++GV P++L D+ L G Sbjct: 122 QFAPLNFIIISIDKDMLQLVSDNVKIYDPINELIIDREYVIKKYGVPPEKLNDFMALVGD 181 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIAR 233 + +PGV GIG K+A L+ + S+E I +NLD + K ++ + + L +++ Sbjct: 182 AIDNIPGVKGIGEKTAANLIKRYGSIENILKNLDIIKPLKVSDIIKKNIKSLQLSKELVI 241 Query: 234 LQTDLHIDGNLQQLRLVR 251 L+ D I+ L L++ + Sbjct: 242 LRKDTPIEIKLDDLKIKQ 259 >UniRef50_Q252Y8 DNA polymerase I n=14 Tax=Chlamydiaceae RepID=Q252Y8_CHLFF Length = 869 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 73/256 (28%), Positives = 129/256 (50%), Gaps = 11/256 (4%) Query: 4 HLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 + I+DA + R + +G+ V ++++LI P H VAVFD N Sbjct: 3 KIFILDASGFVFRAYFALPDMKNSSGKGTQAVFGFIRSINKLIKEFSPNHMVAVFDGPN- 61 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + R + DYK+ R E+L+ ++P ++ G+ G EADD+ A+++ Sbjct: 62 NKQSRREIYADYKSNREKKEEDLYQQIPVVKEYCNLLGLSHLEVEGVEADDVIASVSKLA 121 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW-LDAPFIDKEFGVQPQQLPDYWGLAG 173 G++ I + DK QL+SP + + + ++ + +D + +GV P ++PDY L G Sbjct: 122 IAEGYEVCICTADKDLLQLVSPNVVVINPWKDQPPIDENGVVNIYGVPPCRIPDYLALVG 181 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR 233 +S +PGV+G GPK A LL ++ S+EGI E+LD + K K++ L +D+A Sbjct: 182 DTSDNIPGVSGCGPKKAAALLQKYHSVEGILEHLDELTGSTHKMFSEQKDILLLSKDLAV 241 Query: 234 LQTDLHIDGNLQQLRL 249 L ++ + ++ L Sbjct: 242 LNNNVPLPTEIKDLEF 257 >UniRef50_B9Y7P1 DNA polymerase I n=2 Tax=Erysipelotrichaceae RepID=B9Y7P1_9FIRM Length = 900 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 118/262 (45%), Gaps = 19/262 (7%) Query: 3 VHLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 +L+VD +++ R + + +++ + QP + FD Sbjct: 32 KKMLLVDGNSMLFRAFYATFMRPMSTSTGIPTNAIYGFAMMINKAVQIIQPDAMLVAFDK 91 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH+ +YK GR P+ L ++ P +R E G+ + + EADD+ ++ Sbjct: 92 GKHT--FRHELFAEYKGGRKETPDALVEQFPIVREYLEAAGIKQFEMTDIEADDIIGSMI 149 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 K ++S+D+ QL+ T + + + + ++ G+ P Q+ D Sbjct: 150 KKY--PDWDINVLSSDRDMLQLIDETTSVWLMKKGISDIEEMTVESLKEKMGITPDQIRD 207 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 GL G +S +PG+ +G K+A +LL +F ++E + N D + K + +E K+ A L Sbjct: 208 LKGLMGDASDNIPGIPKVGEKTALKLLEQFGTVENLIANTDQLKGKLKDNVEAFKDQALL 267 Query: 228 CRDIARLQTDLHIDGNLQQLRL 249 + +A ++TD+ I ++ Sbjct: 268 SKRLATIKTDVEIPFETEEFTF 289 >UniRef50_Q65W28 PolA protein n=42 Tax=Bacteria RepID=Q65W28_MANSM Length = 965 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 18/263 (6%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L++VD + + R + + + + L LI QP+H VFD + Sbjct: 16 NPLVLVDGSSYLYRAFHAFPPLTNSLGEPTGAMFGVLNMLKSLITQVQPSHIAVVFDAKG 75 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R + YK+ RPPMP++L ++ L G+P S G EADD+ TLA++ Sbjct: 76 KT--FRDELFEQYKSHRPPMPDDLRKQIQPLHDIIRALGIPLLSIEGVEADDVIGTLALQ 133 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 + AG + I + DK QL+ + + + LD + +++G+ P+ + DY L G Sbjct: 134 ASSAGKKVLISTGDKDMAQLVDDNIMLINTMNNTLLDREGVIEKYGIPPELIIDYLALMG 193 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEMAF 226 SS +PG++G+G K+A LL S+ IY NLD V A+K +KL K A Sbjct: 194 DSSDNIPGISGVGEKTALGLLQGIGSMAEIYANLDKVADLPIRGAKKLGEKLAAAKADAD 253 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 L +A ++TD+ +D N +QL + Sbjct: 254 LSYVLATIKTDVELDLNPEQLII 276 >UniRef50_Q3Z6P9 DNA-directed DNA polymerase I n=5 Tax=Dehalococcoides RepID=Q3Z6P9_DEHE1 Length = 903 Score = 280 bits (717), Expect = 4e-74, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 20/266 (7%) Query: 1 MAVHLL-IVDALNLIRRIHAVQG----------SPCVETCQHALDQLIMHSQPTHAVAVF 49 M ++ + D NL+ R + V L +++ +P F Sbjct: 1 MNKPVIVLFDGTNLVHRAYHVLPPLAIRKTGEVVGAAFGFASILIKVLTDLKPDCYAISF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH+ YKA RPPMP+EL ++ +R + +P + SG EADD+ T Sbjct: 61 D--RKGPTFRHEMFKAYKAQRPPMPDELVSQLGRVRQIVDAFNMPVYEQSGFEADDVLGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIR------DYFQKRWLDAPFIDKEFGVQPQ 163 LA + AG + I S D QL+ P +RI + D + ++G+ P+ Sbjct: 119 LATRAAAAGMEVIIASGDADSMQLVGPDIRILYPGPAGSFASTSLYDEVAVRAKYGLGPE 178 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHK 222 + DY L G S +PGV GIGPK+A +L+ E+ +E IY+NLD + +KKL + Sbjct: 179 HIADYKALMGDPSDNIPGVPGIGPKTAQKLIEEYGGIEDIYKNLDKISPPGLQKKLADNA 238 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQLR 248 E+A + + + DL +D ++++ R Sbjct: 239 EVARDSKILTTIVCDLPLDFSIEECR 264 >UniRef50_A8USN7 DNA polymerase I 3'-5' exo domain n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8USN7_9AQUI Length = 291 Score = 280 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 14/255 (5%) Query: 5 LLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 + ++DA + I R + + AL ++ +P + V VFD + Sbjct: 6 IYLIDASSFIYRGFFALPPLTTKDGFPTGAIYGFLRALLSIMKSERPEYLVVVFDHPAPT 65 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 R +YKAGRP MP+ L ++P ++ G+P G EADDL A LA + + Sbjct: 66 --KRDSLFKEYKAGRPSMPDPLRLQIPVIKELLWLMGIPTLEVEGYEADDLIAILAKRFS 123 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 + G + I + DK QL+S + + + + + +FGV PQ++ DY L G Sbjct: 124 EKGFKVKIYTPDKDMLQLVSENVVVINPMNWEVFNPDKVKDKFGVPPQKVADYLALVGDK 183 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQ 235 VPGV G+GPK+A +L+ +F + I E + + + + +E L + + Sbjct: 184 IDNVPGVRGVGPKTAVKLIEKFGGVPNILERWEEFKKIYPE---AKREELELSYQLVKPM 240 Query: 236 TDLHIDGNLQQLRLV 250 TD + + + +L Sbjct: 241 TDAEVSLSDEDFKLR 255 >UniRef50_A8SN89 DNA polymerase I n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=A8SN89_9FIRM Length = 888 Score = 280 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 15/261 (5%) Query: 3 VHLLIVDALNLIRRIHAVQGS---------PCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 +L++D +LI R + V + + + PTH FD + Sbjct: 14 KKILLIDGSSLIFRAFYAIRNLTTKDGVFVNGVYGFLNMYYKALELINPTHIFVAFDKGS 73 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +RH DYK R P E+ + L+ V EADD+ T+A Sbjct: 74 KT--FRHNEFADYKGTRDNAPNEITYQFGILKDLLSSMNVNYLELDEYEADDIIGTIAKL 131 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 + G + I + D+ Y QL+ + + + + ++ I +E+ + P+QL D Sbjct: 132 AQKEGFEVDIFTGDRDYLQLVDDNILVYLTKKGISEIKLMNTESILEEYDLSPKQLIDVK 191 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G SS +PGV G+G K+A +L+ E+ +LE +YEN+D + K ++ L K+ A+L R Sbjct: 192 ALQGDSSDNIPGVKGVGEKTALKLIQEYGNLENLYENIDNLKGKLKENLVNEKDKAYLSR 251 Query: 230 DIARLQTDLHIDGNLQQLRLV 250 + + + I+ N++ + Sbjct: 252 YLGEIFLRVPIERNIEDFEIK 272 >UniRef50_C0X9C1 Possible DNA polymerase I (Fragment) n=1 Tax=Enterococcus faecalis TX0104 RepID=C0X9C1_ENTFA Length = 428 Score = 279 bits (715), Expect = 5e-74, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 131/267 (49%), Gaps = 21/267 (7%) Query: 2 AVHLLIVDALNLIRRIHAVQG-------------SPCVETCQHALDQLIMHSQPTHAVAV 48 LL+VD ++ R + + + + ++ PTH + Sbjct: 3 KKKLLLVDGNSVAFRAFFALHNSLERFKNKNGLHTNAIYAFNNMFENVMQKEMPTHVLVA 62 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + +R + +YKAGR P E ++MP +R E GV + EADD+ Sbjct: 63 FDAGKTT--FRTEFYSEYKAGRSKTPGEFKEQMPYIRELLEGLGVKYYELPNYEADDIIG 120 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEF-GVQPQ 163 TLA KV + + ++S D+ QL + T+++ + I +++ G+ P+ Sbjct: 121 TLANKVDKDEYDVVVLSGDRDLTQLATDTVKVDITVKGVSDIESYTPEHIAEKYDGLTPK 180 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHK 222 Q+ D GLAG +S +PGV IG K+A +LL ++ S+EG+YEN+D + + K ++ L K Sbjct: 181 QIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVYENIDEMKKSKMKENLINDK 240 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQLRL 249 E AFL + +A ++ + ++ N++ L Sbjct: 241 EQAFLSKRLATIEVNAPVEVNVEDLAY 267 >UniRef50_D1Y4U0 DNA polymerase I n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4U0_9BACT Length = 866 Score = 279 bits (715), Expect = 5e-74, Method: Composition-based stats. Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 16/254 (6%) Query: 1 MA-VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 M+ +L++D + R + + + ++ +P A FD Sbjct: 3 MSGKKILLIDGHGIAFRAFYAIPELNAPDGTPTNALVGFFNMFARVRHDQRPDEIYAAFD 62 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +RH+ P+YKA R P PEE ++P L GV EADDL + Sbjct: 63 M--KEPTFRHRLYPEYKATRRPTPEEFKIQVPLLHEMLPLLGVHIMERPSVEADDLIGSA 120 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLP 166 AV+ G + I+++DK Q+L P ++I + D P +++G P + Sbjct: 121 AVQFASRGDEVLILTSDKDIMQVLRPGVKILRPGKGVSSFEEYDVPHFTEKYGFPPDTMV 180 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 DY L G S +PGV G+G K+A++LL + S+EGI E+ + +KK+E H A Sbjct: 181 DYLSLMGDSIDNIPGVPGVGEKTASKLLQSYGSIEGIMEHAGELKPALQKKIEEHGAQAV 240 Query: 227 LCRDIARLQTDLHI 240 R + RL+ D + Sbjct: 241 ANRKLTRLKCDEDL 254 >UniRef50_C8NZ98 DNA polymerase I n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ98_ERYRH Length = 833 Score = 279 bits (715), Expect = 5e-74, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 20/263 (7%) Query: 3 VHLLIVDALNLIRRIHAVQ------------GSPCVETCQHALDQLIMHSQPTHAVAVFD 50 LL++D +++ R + + V L + I PTH + FD Sbjct: 2 NKLLLIDGNSMLFRAYYGTLSRGYMKSSSGVVTNAVYGFSTMLAKAIEIINPTHVLVAFD 61 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 ++++ +RH +YK R + EEL + +R + + + SG EADD+ T+ Sbjct: 62 TKDKT--FRHDMFDEYKGTRKEVDEELVSQFALVREFLDAYPIKRFELSGYEADDIIGTM 119 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLP 166 + + I+++D+ QL+ + + + R +D + E G++P+Q+ Sbjct: 120 SRMY--PDFKVEILTSDRDMLQLIDDNVDVLLMKKGLTDLRLMDKTSLMDEMGIEPKQIV 177 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D L G +S +PGV IG K+A +LL ++ + E +Y + + + K +K+ +E A Sbjct: 178 DMKALMGDTSDNIPGVPSIGEKTALKLLGQYTTFENLYVHKEEIKGKMGEKIREFEEQAR 237 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 + +A + T + +D +L ++ Sbjct: 238 MSYKLAEIHTSVPLDIDLSSIKY 260 >UniRef50_A5CDT3 DNA polymerase I n=2 Tax=Orientia tsutsugamushi RepID=A5CDT3_ORITB Length = 910 Score = 279 bits (715), Expect = 5e-74, Method: Composition-based stats. Identities = 79/256 (30%), Positives = 132/256 (51%), Gaps = 12/256 (4%) Query: 3 VHLLIVDALNLIRRIHAVQ-------GSP--CVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + ++D I R + V G+P V + +I P + V VFD Sbjct: 28 KKIFLLDGYPFIFRAYFVNQDLTSHNGNPIGGVYGFATMIMNIISEFNPEYMVVVFDTG- 86 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +RH+ P+YK+ RP +P EL + P +R + + G EADD+ A+LA K Sbjct: 87 -LDNFRHKIYPEYKSHRPELPSELKIQFPLVREIVKYLNINTIEMEGVEADDVIASLANK 145 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 A + IVS+DK QL++ + I D +K+++ ++ GV+P Q+ D+ L G Sbjct: 146 FGNASDEIIIVSSDKDLLQLVNNKVYIYDPIKKQYIREKETIEKLGVRPSQVRDFLSLTG 205 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDIA 232 S +PG+ GIGPK+A +LL +F SL I N + + + RK +E H+++A L + Sbjct: 206 DVSDNIPGIPGIGPKTAIKLLEQFDSLNNILHNYANIASPRHRKLIEEHRQLAELSWQLV 265 Query: 233 RLQTDLHIDGNLQQLR 248 L+ DL+++ +++ LR Sbjct: 266 GLKQDLNLNLSVENLR 281 >UniRef50_P59200 DNA polymerase I n=187 Tax=Firmicutes RepID=DPO1_STRR6 Length = 877 Score = 279 bits (714), Expect = 7e-74, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 116/266 (43%), Gaps = 20/266 (7%) Query: 2 AVHLLIVDALNLIRRIHAVQ-------------GSPCVETCQHALDQLIMHSQPTHAVAV 48 LL++D ++ R + + Q L L+ +P+H + Sbjct: 3 KKKLLLIDGSSVAFRAFFALYQQLDRFKNAAGLHTNAIYGFQLMLSHLLERVEPSHILVA 62 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + +R + DYK GR P+E ++ P +R + G+ + + EADD+ Sbjct: 63 FDAGKTT--FRTEMYADYKGGRAKTPDEFREQFPFIRELLDHMGIRHYELAQYEADDIIG 120 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQ 164 TL Q G TIVS DK QL + + ++ +E G+ P Q Sbjct: 121 TLDKLAEQDGFDITIVSGDKDLIQLTDEHTVVEISKKGVAEFEAFTPDYLMEEMGLTPAQ 180 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKE 223 D L G S +PGV +G K+ +LL+E SLEGIYEN+D + K ++ L KE Sbjct: 181 FIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEHGSLEGIYENIDGMKTSKMKENLINDKE 240 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRL 249 AFL + +A + T I L+ L Sbjct: 241 QAFLSKTLATIDTKAPIAIGLEDLVY 266 >UniRef50_C0E6N1 Putative uncharacterized protein n=1 Tax=Corynebacterium matruchotii ATCC 33806 RepID=C0E6N1_9CORY Length = 893 Score = 279 bits (714), Expect = 8e-74, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 102/253 (40%), Gaps = 17/253 (6%) Query: 13 LIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQ 61 + R Q + + L L+ QPTH FD + +R + Sbjct: 1 MAFRAFYALPTEKFTTSTGQATNAIYGFLSMLATLLHDEQPTHVAVAFDVGRTT--FRTE 58 Query: 62 RLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQA 121 PDYKA R P E ++P L+ G+ EADD+ ATLA G + Sbjct: 59 MFPDYKAQRDETPPEFISQIPILKNLLTALGITTIEKPNYEADDIIATLATTAQPLGFET 118 Query: 122 TIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYWGLAGISSS 177 IV+ D+ QL++ T + + + ++G+ P+Q PD+ L G S Sbjct: 119 LIVTGDRDSLQLVNNTTTVLYPMKGVSVIHRFTPQAVQDKYGLTPEQYPDFAALRGDPSD 178 Query: 178 KVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTD 237 +P + +G K+AT+ +V+ +L + N D + L + L R + + + Sbjct: 179 NLPSIPKVGEKTATKWIVQHGNLTNLLNNADTIKGVVGTNLRERIDQVKLNRQLTEMVKN 238 Query: 238 LHIDGNLQQLRLV 250 L + +L+L Sbjct: 239 LDLTHTPPELKLQ 251 >UniRef50_UPI00016BFC66 DNA polymerase I n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFC66 Length = 865 Score = 278 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 18/264 (6%) Query: 3 VHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + +++VD ++ R + + L L+ QP FD Sbjct: 1 MKIMLVDGFSIAYRAFYGMPLLSTKEGIFTNAIYGFLKILFNLLDTHQPDALAVAFDFAA 60 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RHQ YKA R PMP EL ++P L+ G+ S G EADD+ TLA Sbjct: 61 PT--FRHQYALTYKATRKPMPSELQPQIPLLQDLLSAMGISHISAPGFEADDILGTLATA 118 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW------LDAPFIDKEFGVQPQQLPD 167 A H IVS D+ Q+ + +++I K+ A + ++GV P +L D Sbjct: 119 AAAAKHDVLIVSGDRDLLQIATDSIQIXIPKTKQTGTEIESYYAADVVAKYGVIPTELID 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAF 226 L G +S +PGV G+G K+A +L+ E+++++ +Y NL+ + K ++ L T+K+ A+ Sbjct: 179 VKALMGDASDNIPGVKGVGEKTALKLIAEYKNIDTLYANLENIKGAKLKENLATYKDSAY 238 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 + +A ++ D+ I+ LQ Sbjct: 239 DSKFLATIKIDIPINFTLQDFSFK 262 >UniRef50_A9ITV6 DNA polymerase I n=89 Tax=Proteobacteria RepID=A9ITV6_BORPD Length = 948 Score = 278 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 11/249 (4%) Query: 1 MAVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M LL+VD + + R + + + + L +L+ + +A +FD Sbjct: 44 MNKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVSDHKADYAACIFDA 103 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ +R PDYK+ RPPMPE+L ++ + A G + G EADD+ TLA Sbjct: 104 RGKT--FRDDLYPDYKSHRPPMPEDLAAQIEPIHQAVRALGWQVLAIEGVEADDIIGTLA 161 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + + G + + + DK QL+ + + + LD + +FGV P ++ DY L Sbjct: 162 CQASGMGIRTIVSTGDKDLAQLVDANVTLVNTMSGEVLDETGVRNKFGVPPDRIVDYLML 221 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G + VPGVA +GPK+A + L EF S++ + E D + L L R + Sbjct: 222 VGDAIDNVPGVAKVGPKTAAKWLAEFGSIDSLVEQADGIKGVAGNNLREAIGQFPLTRQL 281 Query: 232 ARLQTDLHI 240 ++ D + Sbjct: 282 LTVKCDCDL 290 >UniRef50_B4U0B7 DNA polymerase I n=5 Tax=Streptococcus RepID=B4U0B7_STREM Length = 899 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 22/269 (8%) Query: 2 AVHLLIVDALNLIRRIHAVQ-------------GSPCVETCQHALDQLIMHSQPTHAVAV 48 LL++D ++ R + + LD ++ QPTH + Sbjct: 23 KNKLLLIDGSSVAFRAFFALYNQIDRFKNHSGLHTNAIYGFHLMLDHMMKRVQPTHVLVA 82 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + +R + DYKAGR P+E ++ P +R G+ + EADD+ Sbjct: 83 FDAGKTT--FRTELFADYKAGRAKTPDEFREQFPYIRDMLGALGIAFYELEHYEADDIIG 140 Query: 109 TLAVKVTQAG--HQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQP 162 TL + TIVS DK QL + + ++ + G+ P Sbjct: 141 TLDKMAERTELPFDVTIVSGDKDLIQLTDANTVVEISKKGVAEFEEFTPAYLMDKMGLTP 200 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETH 221 +Q D L G S +PGV IG K+ +LL E+ SLEGIY+++D+ K ++ L Sbjct: 201 EQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEYGSLEGIYQHVDSFKPSKMKENLLHD 260 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 KE AFL + +A + T I L+ + Sbjct: 261 KEQAFLSKTLATINTSAPITIGLEDIVYQ 289 >UniRef50_C7GZ50 DNA polymerase I n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ50_9FIRM Length = 918 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 15/262 (5%) Query: 2 AVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 + +I+D +L R + + + L + I P + FD Sbjct: 3 SKRAIIIDGNSLFFRAYYAIKANMSADGMATNAIYGFLSMLYKSINDFSPDYIAVAFDLG 62 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +RH++ DYKA R +EL ++P ++ + E DD+ + A Sbjct: 63 GKT--FRHEKFDDYKANRRKTDDELLMQIPVIKEILAAMNIKILQKKAFEGDDIIGSFAR 120 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLPDY 168 V + I+S DK QL+S +I + D + E+ P+ DY Sbjct: 121 FVESDDVEVIIISGDKDMFQLISDNTKIAYTKRGISNIDIYDIQKFEDEYNFAPKHFIDY 180 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 + G SS GV GIG K A L+ ++Q++E IY+N+D ++ K + LE K AF+ Sbjct: 181 KAIMGDSSDNYKGVKGIGDKGARNLVTKYQTIENIYQNIDEISGKTKLALENSKMQAFMG 240 Query: 229 RDIARLQTDLHIDGNLQQLRLV 250 +++A + +L + L ++LV Sbjct: 241 KELATIIVNLDLGLTLDDVKLV 262 >UniRef50_B8I3Y7 DNA polymerase I n=6 Tax=Clostridium RepID=B8I3Y7_CLOCE Length = 896 Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 21/265 (7%) Query: 2 AVHLLIVDALNLIRRIHAVQG------------SPCVETCQHALDQLIMHSQPTHAVAVF 49 +L+VD +++ R + V + L + + P + F Sbjct: 4 EDKILVVDGNSILNRAFYGLSRAAMLTTSEGLYTNAVFGFINILSKHLQDENPKYVCVAF 63 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + + +RH+ YKA R MP EL ++P ++ + + G EADD+ T Sbjct: 64 DLKAPT--FRHKEYDQYKAQRKGMPNELAVQVPIIKQVLDAMNIARVEVEGFEADDILGT 121 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------RWLDAPFIDKEFGVQPQ 163 ++ + G + +++ D+ QL S RI+ + D + +++GV P Sbjct: 122 VSSYAEKQGMKTILLTGDRDSLQLASNYTRIKLPVTRANKTETDEYDYEKVIEKYGVTPG 181 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHK 222 QL D GL G +S +PGV GIG K+A L+ +F SLE +YEN+D V +K R+KLE +K Sbjct: 182 QLIDVKGLMGDTSDNIPGVPGIGEKTALALIKKFNSLEELYENIDKVDKKGVREKLENNK 241 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQL 247 E+AF+C+ +A + + NL Sbjct: 242 ELAFMCKRLATIYRKVPGVENLNDF 266 >UniRef50_B2GGW1 DNA polymerase I n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GGW1_KOCRD Length = 960 Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats. Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 24/272 (8%) Query: 2 AVHLLIVDALNLIRRIHAVQ------------------GSPCVETCQHALDQLIMHSQPT 43 LL++D +L R + V + + +L+ +PT Sbjct: 40 EKRLLLIDGHSLAFRAFFALSRAAEYGNGPGFVTSEGVHTEGVYGFVNTMVKLVREEKPT 99 Query: 44 HAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEA 103 H V FD E + R Q +YK GR PEE H ++P ++ E GVP + G+EA Sbjct: 100 HLVVSFDLEGPT--LRSQEYGEYKGGRDETPEEFHGQVPNIQRVLEALGVPIVTMEGHEA 157 Query: 104 DDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFG 159 DD+ ATLA + + + S D+ Q+++ + + R R +DA + +++ Sbjct: 158 DDVLATLASRAAAEDFEVLVFSGDRDAFQMITDHVTVVYPGRTPSDLRRMDAAAVYEKYK 217 Query: 160 VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLE 219 V PQ PD L G ++ +PGV G+GP A + + + ++ + E+ + K + L Sbjct: 218 VAPQNYPDLAALTGETADNLPGVPGVGPGFAAKWITAYGPVDSLLEHAGQITGKKGEALR 277 Query: 220 THKEMAFLCRDIARLQTDLHIDGNLQQLRLVR 251 ++E+ R + RL TDL ++ +L L + Sbjct: 278 ENEELVRRNRKLNRLVTDLPLEIDLSATALPK 309 >UniRef50_C6W4A8 DNA polymerase I n=44 Tax=Bacteria RepID=C6W4A8_DYAFD Length = 963 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 21/268 (7%) Query: 1 MAV---HLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAV 46 M L ++DA+ LI R H + V + L +++ +PTH Sbjct: 1 MEKPIHKLFLLDAMALIYRAHFAFIKAPRITSKGLNTSAVFGFTNTLLEVLQKEKPTHIG 60 Query: 47 AVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDL 106 FD + +RH + YKA R PE++ +P ++ +P G EADD+ Sbjct: 61 VAFDTAAPT--FRHVQFEAYKAQREAQPEDITVAIPLVKRLLRGMCIPILELDGYEADDI 118 Query: 107 AATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDY----FQKRWLDAPFIDKEFGVQP 162 T+A + ++ G + +++ DK Y QL+ + I L I + +Q Sbjct: 119 IGTIAKEASREGFEVYMMTPDKDYGQLVEQYIHIYKPAFLGKGAEVLGVQQILDRWQIQR 178 Query: 163 -QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETH 221 Q+ D GL G + +PG+ G+G K+A +L+ E+ ++E + + + K +K+ + Sbjct: 179 IDQVIDILGLMGDAVDNIPGIPGVGEKTAQKLIQEYDTIENLITHAGEIKGKLGEKIREN 238 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLRL 249 + A L + +A + + + + + L + Sbjct: 239 FDKAVLSKQLATIDCKVPVPFDAEDLTI 266 >UniRef50_Q55971 DNA polymerase I n=13 Tax=Cyanobacteria RepID=DPO1_SYNY3 Length = 986 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 29/277 (10%) Query: 1 MAVH---LLIVDALNLIRRIHAVQG--------------SPCVETCQHALDQLIMHSQPT 43 M+ LL+VD +L R + G + ++L Q++ +P Sbjct: 3 MSAKSPLLLLVDGHSLAFRAYYAFGLSKKGPLRTTAGIPTSVCFGFLNSLMQVMESQKPA 62 Query: 44 HAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEA 103 FD R +RH+ YK+ R PE+ +++ L+ E + + +G EA Sbjct: 63 AIAIAFD--RREPTFRHEADGAYKSNRQETPEDFAEDLSYLQQLLEALNLQTITYAGYEA 120 Query: 104 DDLAATLAVKVTQAGHQATIVSTDKGYCQLLSP--TLRIRDYFQK--------RWLDAPF 153 DD+ TLA + + AG+Q I+S D+ QL+SP + + + LD Sbjct: 121 DDILGTLACQGSDAGYQVKILSGDRDLFQLVSPEKNISVLYLTRNPFSSNTGYDELDWQG 180 Query: 154 IDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK 213 + + GV P Q+ D+ L G S +PG+ GIG K+A +LL E+++LE +YENL + Sbjct: 181 VVDKMGVTPAQIVDFKALCGDKSDCIPGINGIGEKTAIKLLAEYETLEKVYENLAQIKGA 240 Query: 214 WRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 + +L+ K+ A + +AR+ D+ + + L+L Sbjct: 241 LKTRLDNGKDDAMHSQMLARIVVDVPLPVTWEDLQLT 277 >UniRef50_C2MBR8 DNA polymerase type I n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MBR8_9PORP Length = 948 Score = 276 bits (706), Expect = 6e-73, Method: Composition-based stats. Identities = 80/265 (30%), Positives = 127/265 (47%), Gaps = 20/265 (7%) Query: 1 MAVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 M L ++DA LI R + + + + L +I +P + Sbjct: 1 MP-TLYLLDAYALIYRAYYAFINRPLVDAQGRDTSALYGFASTLQDIIDKERPDYIAVAM 59 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH+ P+YKA RP PE + MP ++ + +P G EADDL T Sbjct: 60 DMPGGT--FRHKEYPEYKANRPETPETIRFSMPYIKELVQAYQIPLLGVEGYEADDLIGT 117 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQ-PQQ 164 L+ + +AG++ +V+ DK Y QL+ P ++ + L A I ++G++ P Q Sbjct: 118 LSRQAVEAGYEVRMVTPDKDYGQLVGPHAQMFAPQRTGSGFELLGAEEITAKYGIRYPLQ 177 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + DY GL G SS VPG GIG +A +LL EF ++E IY +D V + KKL KE Sbjct: 178 MIDYLGLVGDSSDNVPGCPGIGKVAAQRLLEEFDTIEDIYARIDQVKPTYAKKLLAAKEQ 237 Query: 225 AFLCRDIARLQTDLH-IDGNLQQLR 248 L R + + TD+ + + Q++ Sbjct: 238 TMLSRHLVTIVTDVPGVTFDPDQMK 262 >UniRef50_C7H3Z2 DNA polymerase I n=2 Tax=Ruminococcaceae RepID=C7H3Z2_9FIRM Length = 859 Score = 275 bits (705), Expect = 8e-73, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 122/267 (45%), Gaps = 19/267 (7%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 + + LL++D ++ R + + + ++ L+ +P FD Sbjct: 6 LTMRLLVIDGNSIANRAFYGIKLLTTKDGRYTNAIFGFLNIMNSLLRECEPDEVAVAFDL 65 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 ++ + +RH+ YK R MP+EL +MP L+ G S G EADD+ TLA Sbjct: 66 KHPT--FRHEMYDGYKGTRHAMPDELAQQMPILKELLTDLGYRQVSAKGWEADDILGTLA 123 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDY------FQKRWLDAPFIDKEFGVQPQQL 165 + + D+ QL+S T + + +D I +++G++P+QL Sbjct: 124 AACEARRDDCFLATGDRDSLQLVSETTTVLLATSAMGRSKTETMDLDAIHEKYGIEPKQL 183 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLD--AVAEKWRKKLETHKE 223 + L G +S +PGV GIG K+A L+ F +L+ +Y++LD + + R+ L +E Sbjct: 184 IEVKSLMGDTSDNIPGVKGIGEKTAMTLVKNFGTLDSVYDHLDSPIIKPRQRENLLACRE 243 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRLV 250 A+L + ++TD ID ++ Sbjct: 244 DAYLSHTLGTIRTDAPIDTAEGAYKVT 270 >UniRef50_Q2JPZ4 DNA polymerase I n=3 Tax=Cyanobacteria RepID=Q2JPZ4_SYNJB Length = 931 Score = 275 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 22/268 (8%) Query: 2 AVHLLIVDALNLIRRIHAV--------------QGSPCVETCQHALDQLIMHSQPTHAVA 47 LL+VD +L R + +L +++ PTH Sbjct: 5 TPTLLLVDGHSLAYRSFYAFAYSREGGLRTSTGIPTSVSFGFLKSLLEVLDKYTPTHVAV 64 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 FD R +RH+ YK+GRP P E +++ L+ +P G EADD+ Sbjct: 65 AFD--TRQPTFRHEADETYKSGRPETPPEFIEDVENLKQVLTALRIPILVVPGFEADDIL 122 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLS--PTLRIRDYFQK---RWLDAPFIDKEFGVQP 162 TL+ Q ++ I+S D+ QL+ +R+ K + ++ G+ P Sbjct: 123 GTLSRLAPQ-DYRVQILSGDQDLFQLIDTDGRVRVLHLNSKDRISEFGPEQVKEKLGIWP 181 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHK 222 Q+ DY L G S +PGV GIGPK A +LL + SL+ I+++LD + K ++ L+ Sbjct: 182 WQVVDYKALCGDPSDNIPGVKGIGPKRAVELLERYGSLDEIFDHLDEIQGKVQQYLKEGI 241 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQLRLV 250 A + +AR++ D+ + + + ++L Sbjct: 242 PAAHHSQFMARIKCDVPLSPDWESMKLT 269 >UniRef50_Q7WZP8 DNA polymerase type I n=2 Tax=unclassified Bacteroidetes RepID=Q7WZP8_9BACT Length = 939 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 18/266 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQG-----------SPCVETCQHALDQLIMHSQPTHAVAVF 49 + L ++D ++LI R H G + + + L L+ +PTH + F Sbjct: 4 LTPKLFLLDGMSLIYRAHFALGKAATTTAQGLKTGAILGFVNTLVALLEKEKPTHLIVAF 63 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + ++ +RH P YK+ RP PEE+ +P +++ E G+ + SG EADDL T Sbjct: 64 DGKEKT--FRHALFPAYKSHRPVQPEEISIAIPYIKSILEGFGILAITYSGYEADDLLGT 121 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYF----QKRWLDAPFIDKEFGV-QPQQ 164 LA K G + I+STDK Q++ + + + L I ++ + +P+Q Sbjct: 122 LAKKAAVMGCRTYIMSTDKDLAQIVGDNIYLYKPSSYGEKSTILGEKEILAQWEIARPEQ 181 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + D L G S +PG+ IG K+A +L+ EF +LE I + + K + L + + Sbjct: 182 VRDILALEGDPSDFIPGIPSIGKKTARKLIKEFDNLENILAHSHMLTGKLKANLIQYADQ 241 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRLV 250 L +++A ++T++ I +L++ Sbjct: 242 GILSKELATIRTNVPITLDLEKCHYQ 267 >UniRef50_Q4L6E6 Similar to 5&apos n=2 Tax=Staphylococcus RepID=Q4L6E6_STAHJ Length = 292 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 20/258 (7%) Query: 1 MAVHLLIVDALNLIRRIHAVQ-------------GSPCVETCQHALDQLIMHSQPTHAVA 47 M +L+VD + L+ R + ++ + I P+H Sbjct: 1 MENRVLLVDGMALLFRHFYATSLHNQFMYNSKDIPTNGIQGFVRHIFTAINEINPSHVAV 60 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 +D + +R+ DYK RP PEEL + ++ +Q G + EADD+ Sbjct: 61 CWDMGQST--FRNDMYTDYKQNRPAPPEELIPQFDYVKEISDQFGFINVGMTNYEADDVI 118 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQ 163 TLA + + I++ DK Q ++ + + + ++E+ + PQ Sbjct: 119 GTLAKTFSDNN-EVHIITGDKDLLQCINNNVEVWLIKKGFNIYNRYTLARFNEEYQLNPQ 177 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 QL D G S+ PGV GIG K+A +L+ + S+E + N+D + RKK+E K+ Sbjct: 178 QLIDIKAFMGDSADGYPGVKGIGEKTALKLIQTYGSVENVLSNIDQLTPAQRKKIEADKD 237 Query: 224 MAFLCRDIARLQTDLHID 241 L + +A + T++ ++ Sbjct: 238 NLTLSKRLAEIYTEVPLN 255 >UniRef50_B0MR22 DNA polymerase I n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR22_9FIRM Length = 829 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 15/256 (5%) Query: 5 LLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 LI+D +++ R + V + L L P FD ++ Sbjct: 3 FLIIDGNSILNRAFYGIRVLTNSRGVATNAVTGFMNTLLMLEKDVNPDMIAVAFDL--KA 60 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +RH+ YKA R MPE+L ++P ++ G+ G EADD+ T++ Sbjct: 61 LTFRHKMYDGYKANRKGMPEDLAQQLPYMKKIITAMGITIIEKEGFEADDIIGTVSAACA 120 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQK--RWLDAPFIDKEFGVQPQQLPDYWGLAG 173 T+ + D+ QL++ + +R K + I +E+GV P+Q+ + L G Sbjct: 121 DKKIPCTVSTGDRDSFQLVNDYVTVRLAKTKGDIYYTPDVIMEEYGVTPKQMIEVKALMG 180 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDA--VAEKWRKKLETHKEMAFLCRDI 231 SS +PGV GIG K+A L+ EF S++G+YEN+ + + + R KLE KE ++ R + Sbjct: 181 DSSDNIPGVPGIGEKTALSLIKEFASVDGVYENIGSTLITKGVRTKLENGKESCYMSRQL 240 Query: 232 ARLQTDLHIDGNLQQL 247 A + ID L Sbjct: 241 AEICLTAPIDTELSHY 256 >UniRef50_D1AJI6 DNA polymerase I n=2 Tax=Fusobacteriaceae RepID=D1AJI6_SEBTE Length = 885 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 80/265 (30%), Positives = 136/265 (51%), Gaps = 18/265 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M +I+D ++ R H + + + L+ +I P + VA D Sbjct: 1 MP-KAVILDTSAIMYRTHFALMGMRNSKGKATGATYGFINTLNLIIKEFSPDYLVACLDV 59 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + RS R L +YKA R MPEEL ++P + + +P + G EADD+ ATLA Sbjct: 60 K-RSELKRTSELTEYKAHREDMPEELVYQIPKIMEVLDAYNIPKYKVDGYEADDVIATLA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------RWL-DAPFIDKEFGVQPQQ 164 K + ++ IV+ DK QL+ + I + +++ + + GV+P Q Sbjct: 119 KKFSDDNNEVFIVTGDKDLMQLIKDNINIALLGKGDGKSQFKYIQTEQDVVEYLGVRPDQ 178 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + D +GL G S +PG+ GIGPK+ +L+ ++ +LE +YEN++ + K ++KLE KE Sbjct: 179 VIDLFGLMGDKSDGIPGIQGIGPKTGVELISKYGNLETLYENIEEIKGKRKEKLENEKEN 238 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRL 249 AFL R++A + DL ++ N ++L+ Sbjct: 239 AFLSRELATVHMDLDVEYNKEKLKY 263 >UniRef50_C6CWL9 5'-3' exonuclease n=3 Tax=Bacillales RepID=C6CWL9_PAESJ Length = 285 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 18/261 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFD 50 +LIVD + L+ R Q + + L + QPTH +D Sbjct: 3 ENKILIVDGMALLFRAFFAQQYSARRMADGTPTNAIYGFMQYLFDAVNQFQPTHVACCWD 62 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 +++ +R + +YKA RP P++L + ++ G+P G EADD T+ Sbjct: 63 MGSKT--FRTEMYSNYKANRPEAPDDLIPQFSLVKDIVAALGIPNIGIEGYEADDCIGTV 120 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLP 166 + +++Q I++ D+ QL+ + + + R D F+ ++ G+ P Q+ Sbjct: 121 SKQLSQM-AHVYILTGDQDMLQLVEERIHVVIMKKGRGNYAVYDLGFLKEDKGIHPFQVI 179 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 + GL G +S PGV GIG K+A +LL EF+S++GI NLD+V++ + K+E +M Sbjct: 180 EMKGLTGDTSDNYPGVKGIGEKTALKLLQEFESIDGILSNLDSVSKSIKAKIEADLDMLH 239 Query: 227 LCRDIARLQTDLHIDGNLQQL 247 L R +AR+ ++ + +L++ Sbjct: 240 LSRTLARINIEVPVACSLEEC 260 >UniRef50_C1TPP4 DNA polymerase I n=2 Tax=Synergistaceae RepID=C1TPP4_9BACT Length = 854 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 111/259 (42%), Gaps = 17/259 (6%) Query: 1 MAV-HLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 M ++ VD L R + + + L ++ P VFD Sbjct: 1 MTEGPIMFVDGHGLAFRAFYAIPELTAPDGTPTNALVGFFNMLSKIKKEWAPQSLSVVFD 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 ++ +RH+ +YK GR P PEE ++P L+ G+P G EADD+ + Sbjct: 61 APGKT--FRHEMFEEYKKGRKPTPEEFKVQLPILKKMLGLLGIPVICRPGVEADDVIGAV 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLP 166 + + G +V++DK Q+L + + + DA E+G P ++ Sbjct: 119 SREYAYKGTPVLVVTSDKDMLQILDEGITVIRPGKGISSFNRWDAETFQGEYGFPPARMA 178 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 DY L G S VPGV GIG K+A +LL ++ LEGI + + RKKLE + ++A Sbjct: 179 DYLALVGDSVDNVPGVPGIGDKTARRLLGKYGDLEGILAHTADLTAGQRKKLEENADLAR 238 Query: 227 LCRDIARLQTD-LHIDGNL 244 + L D D +L Sbjct: 239 KSLILTTLSVDGAPDDVDL 257 >UniRef50_A9G0B1 DNA polymerase I n=3 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G0B1_SORC5 Length = 900 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 13/259 (5%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L +VD + R + + + L +L+ +P + D Sbjct: 14 PDVLYLVDLSGYVFRAYHAISPLSSPSGEPTHATYGTVAMLTKLVDERKPAYLGVAMDSP 73 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +R + P YKA RPP P +L +M R E +P + G EADDL A Sbjct: 74 GKT--FRDELDPRYKAHRPPPPPDLGVQMSRCREIVEAYRIPIFIQEGLEADDLVAVAVA 131 Query: 113 KVTQAGHQATIVSTDKGYCQLL-SPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + + G + I S+DK QL+ + + D + + P + +FGV P+Q+ D L Sbjct: 132 RAKERGLRVVIASSDKDLMQLVDGEQVMLWDAMRDKVYGHPEVVAKFGVPPEQVRDLLAL 191 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRD 230 G +S VPGV G+G K+A +LL +F SL IYE + V + + R+ L+ ++ A L + Sbjct: 192 VGDTSDNVPGVPGVGLKTAAELLAQFGSLSAIYERIGEVKKPRIRESLQQNEADARLSQK 251 Query: 231 IARLQTDLHIDGNLQQLRL 249 + L + +L+ LR Sbjct: 252 LVTLDGGAPVSLDLETLRY 270 >UniRef50_D1R879 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R879_9CHLA Length = 896 Score = 273 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 12/255 (4%) Query: 5 LLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 L ++DA + R + + + + ++ +L P H V VFD N + Sbjct: 10 LYVLDASGFLYRSYFAIRNMTNKQGESTNALYGFIRSVLKLFKDFNPEHLVCVFDGPN-N 68 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 + R + P+YKA R MP +L ++ + G+P S EADD T+A Sbjct: 69 AKKRLELYPNYKAHRSAMPPDLRYQIEWAQDFCSLMGIPYLSVPEVEADDTMGTVAKWAE 128 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQ-KRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 Q G + ++DK QL++P + + + + LDA I+KE+GV P Q+ D + G Sbjct: 129 QQGAITYLCTSDKDMAQLVNPHVFLLNTHKDNTILDAASIEKEWGVPPSQMVDLLAMTGD 188 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR-KKLETHKEMAFLCRDIAR 233 +S +PG+ G G K+A LL +F SL+ I + + V K + + L+T ++A + RD+ Sbjct: 189 ASDNIPGLTGFGEKTAAALLRQFGSLDYILAHPEEVPGKKKQETLQTEADLARISRDLVT 248 Query: 234 LQTDLHIDGNLQQLR 248 + + I + + Sbjct: 249 IDLSVEIPQEIAFYK 263 >UniRef50_Q11NX3 DNA polymerase I n=11 Tax=Bacteria RepID=Q11NX3_CYTH3 Length = 946 Score = 272 bits (696), Expect = 7e-72, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 18/264 (6%) Query: 3 VHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 L ++DA+ LI R H + V ++L ++++ +PTH FD Sbjct: 2 KKLFLLDAMALIYRAHFAFSKNPRVTSTGISTGAVFGFTNSLLEILLKEKPTHIGVAFDL 61 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + + +RH +YKA R PE++ +P + E +P G EADD+ T + Sbjct: 62 QGPT--FRHDNFTEYKANRQEQPEDISVAIPYIYRLLEGMNIPILGVPGYEADDIVGTFS 119 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDY----FQKRWLDAPFIDKEFGV-QPQQLP 166 G +++ DK Y QL++ + + D + +F + + Q+ Sbjct: 120 KIAPPLGFDVYMMTMDKDYMQLVNEHVFLYRPAYMGNDVEIYDINKVLAKFNIKEVDQVR 179 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D GL G + +PG+ GIG K+A +L+ +F S+E + +N D + K ++ + Sbjct: 180 DILGLQGDTVDNIPGIPGIGEKTAQKLIADFGSVENLIKNADQLKGKQKENVINFAAQGL 239 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 L +++A + ++ I+ + + LR+ Sbjct: 240 LSKELATIHCEVPIEFDEEALRVK 263 >UniRef50_Q04G12 DNA polymerase I n=28 Tax=Lactobacillales RepID=Q04G12_OENOB Length = 903 Score = 272 bits (696), Expect = 9e-72, Method: Composition-based stats. Identities = 68/266 (25%), Positives = 129/266 (48%), Gaps = 19/266 (7%) Query: 1 MAVHLLIVDALNLIRRIHAV-------------QGSPCVETCQHALDQLIMHSQPTHAVA 47 M LL++D +L R + + + DQ++ P +A+ Sbjct: 12 MTKTLLLIDGNSLAFRAFYAMYNQLDRMVAHTGLHTNALVAFNNFFDQVVEKMNPDYALV 71 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 +D ++ +R + DYK R P EL ++ P LR + G+ + G EADD+ Sbjct: 72 AWDAGKGATTFRAKIFDDYKGDRQTTPPELSEQFPYLRKMVDLHGIHSYELPGFEADDII 131 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEF-GVQP 162 T + +AG + TI++ D+ QL++ + + + F+ +++ G+ P Sbjct: 132 GTYSKLAEKAGLKTTIITGDRDLTQLVTDNVSVNVTKKGVTELDRYTPKFLAEKWGGITP 191 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETH 221 Q+ + L G +S PGV +G K+A +LL EF SL+GIY+++D++ K ++ L Sbjct: 192 SQVIEMKSLTGDTSDHYPGVTKVGLKTAIKLLNEFGSLDGIYQHIDSMKTSKLKENLLND 251 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQL 247 KE A+ ++A ++TD ++ +++L Sbjct: 252 KESAYRAHELATIRTDAPVELEMKEL 277 >UniRef50_A5EWG4 DNA polymerase I n=10 Tax=Gammaproteobacteria RepID=A5EWG4_DICNV Length = 901 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 72/256 (28%), Positives = 111/256 (43%), Gaps = 15/256 (5%) Query: 5 LLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 +++VD + + R + + L +L QP + VFD ++ Sbjct: 8 VVLVDGSSYLFRAFYALPPLTTQKGHPTGAMHGVIKMLMRLYDDYQPNYFAVVFDAAGKT 67 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +RHQ PDYKA RPPMPE+L ++ L G P SG EADD+ TLA + Sbjct: 68 --FRHQIYPDYKANRPPMPEDLAVQIQPLHQLITALGFPLIMESGVEADDVIGTLARQAL 125 Query: 116 QAGHQATIVSTDKGYCQLLS-PTLRIRDYFQKRWLDAPFIDKEFGV---QPQQLPDYWGL 171 +Q I S DK QLL+ + + D + + A + K F + Q+ D+ L Sbjct: 126 AEDYQVIISSGDKDMTQLLTHADITLLDTMKNETITASDVAKRFKIEQLTAAQVIDFLAL 185 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G S +PGV +G K+A + L + SL+ I EN D + K L + + Sbjct: 186 VGDKSDNIPGVEKVGAKTAEKWLATYGSLDAIIENADKIRGKVGDNLRAGLAQLKCSQQL 245 Query: 232 ARLQTDLHIDGNLQQL 247 A + L + + L Sbjct: 246 ATINQTLDLPYRIADL 261 >UniRef50_B9L837 DNA polymerase I n=2 Tax=Nautiliaceae RepID=B9L837_NAUPA Length = 872 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 11/257 (4%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + L I+D + R + + + + L + + V D + Sbjct: 1 MTLTIIDTFGFLFRNFYALPPLKSKKGFPTGMITGFLNFVASLGRDFETDYIVFTLDSKE 60 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +R + DYKA RP PE+L ++P + G G E+DD+ A+LA Sbjct: 61 K-DTFRKEIFKDYKANRPEAPEDLKTQLPVAIELINEMGFKMLEIPGYESDDIIASLAKL 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSP-TLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 G + IVS DK QL+ + I D +K ++ ++FGV P+ ++ L Sbjct: 120 AASQGIKVKIVSHDKDMYQLIDDDKIVIFDPIKKVEINEAKCIEKFGVHPKDFINFQALV 179 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIA 232 G SS +PGV G+G K+A +L+ ++++LE +Y+++D + +KKL KE AFL R++ Sbjct: 180 GDSSDNIPGVKGVGVKTAAKLINQYKTLENLYDHIDEIKGALQKKLLADKENAFLSRELV 239 Query: 233 RLQTDLHIDGNLQQLRL 249 L+TDL + NL++ + Sbjct: 240 TLKTDLFDNINLEEFKY 256 >UniRef50_D2R075 DNA polymerase I n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R075_9PLAN Length = 966 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 77/258 (29%), Positives = 136/258 (52%), Gaps = 12/258 (4%) Query: 4 HLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 + ++DA +LI ++ Q V+ + LI + + VA FD + Sbjct: 18 TVYVIDAHSLIYQVFHAMPEMTSPSGQPVGAVQGFVRDMLDLIENRSAEYIVAAFDHPSP 77 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + +RH +YK R MP +L ++P ++ + G+ S G EADD+ ATLA +V Sbjct: 78 T--FRHTMYENYKVHRDEMPGDLQSQIPIIQQFLDALGITQLSIPGFEADDILATLAKRV 135 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 G + +V++DK QL++ +++ + + D + +G++P Q+ D+ L G Sbjct: 136 ASDGGRCLVVTSDKDCRQLINDRVQMLNLRKNEIFDDVALMATWGIRPDQVVDFQSLVGD 195 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIAR 233 S VPGV IGPK A +LL ++++LEG+ +N D V+ K ++ L+ ++ AFL RD+ R Sbjct: 196 SVDNVPGVPLIGPKIAQELLAKYETLEGVLDNADQVSGAKRKENLKNFRDQAFLSRDLVR 255 Query: 234 LQTDLHIDGNLQQLRLVR 251 L+ D+ D + +R+ R Sbjct: 256 LKNDMEFDLDWSSVRVGR 273 >UniRef50_C5CIW2 DNA polymerase I n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIW2_KOSOT Length = 896 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 18/266 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQP--THAVAV 48 MA L + D ++ R + + + V L + I + +A+ Sbjct: 1 MANRLFLFDGTAIVYRAYFAIDVSLTNSKGEPTNAVYGTARMLSRFIKNYIAEGDYALFA 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + + RH YKA R MP+ L ++ + E G+ S + EADD+ A Sbjct: 61 FD--RKEATHRHDLFEGYKATRAEMPDALVAQLKYIPDLVEGFGIKFHSVATLEADDIIA 118 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQ 164 T K + IVS DK QL+ +++ + D ++++FG+ P++ Sbjct: 119 TAVTKYRDKFDEIVIVSGDKDILQLVDEKVKVLRFVSGLTDLEEYDRRKVEEKFGLPPEK 178 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + + L G +S +PGV GIG K+A +LL E+ S++ IY+N+ ++ RKKL K+ Sbjct: 179 IYELLSLCGDTSDNIPGVPGIGIKTALKLLKEYGSIDEIYKNIRKLSPGLRKKLMDGKKA 238 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRLV 250 + + + RL TD + L++LR Sbjct: 239 LEMSKKLVRLVTDADLHIELEELRYR 264 >UniRef50_D0LQ66 DNA polymerase I n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQ66_HALO1 Length = 930 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 114/261 (43%), Gaps = 18/261 (6%) Query: 3 VHLLIVDALNLIRRIHAVQ--------------GSPCVETCQHALDQLIMHSQPTHAVAV 48 L I+D I R + + + L +L + +P V Sbjct: 2 ERLHILDGHGYIYRAYFALAGPGSQRLSTKGGMPTAALFVYAQMLIRLFIDERPERIAVV 61 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD R+ +R++ YKA R PE+L ++P E G P G EADD+ A Sbjct: 62 FDPPGRT--FRNELDDAYKATRRETPEDLKPQLPYFSKLTEALGWPVICEQGVEADDVIA 119 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDY 168 TL + G + S DK QL+ + + D + DA ++K+FGV P +L DY Sbjct: 120 TLVGRARAQGWDVVVYSGDKDLMQLVDEGVTVIDSLRSIVYDAARVEKKFGVPPAKLRDY 179 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLE--THKEMAF 226 L G S VPG+ G+G K+A +LL + S++GI + + + K ++ E Sbjct: 180 LALVGDVSDNVPGMPGVGAKTAAKLLGSYDSIDGILAHNEELKGKMGERFRDPEALERLA 239 Query: 227 LCRDIARLQTDLHIDGNLQQL 247 R++ L++D+ D L L Sbjct: 240 RSRELVTLRSDVATDAELDAL 260 >UniRef50_C5RBK8 DNA polymerase I n=9 Tax=Lactobacillales RepID=C5RBK8_WEIPA Length = 931 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 76/269 (28%), Positives = 128/269 (47%), Gaps = 22/269 (8%) Query: 1 MAV-HLLIVDALNLIRRIHAVQ-------------GSPCVETCQHALDQLIMHSQPTHAV 46 MA LL++D +L R + + + LD +I P A+ Sbjct: 33 MAKPTLLLIDGNSLAFRAFYALINQVDRFVNHEGLHTNALVGFNNLLDGIIDPFNPDLAL 92 Query: 47 AVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDL 106 +D + +R + +YK R P+EL ++ LR E G+ + G EADD+ Sbjct: 93 VAWDAGKTT--FRTGKFDNYKGNRDNTPQELVEQFEPLRKMVELHGIKSYELPGFEADDI 150 Query: 107 AATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEF-GVQ 161 T+A + G+ TIV+ D+ QL+S + + + I + + G++ Sbjct: 151 IGTMARLGEENGYSVTIVTGDRDMTQLVSDDITVWVTKKGISEIDHYTPAMIAELYDGLE 210 Query: 162 PQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLET 220 P+Q+ D GL G +S PGVAGIGPK+A +L+ ++ S+ +YE +D + K ++KL Sbjct: 211 PKQIVDIKGLQGDTSDNYPGVAGIGPKTALKLIKQYHSIPEMYEQIDEMKASKQKEKLVN 270 Query: 221 HKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 K+ A L RD+A++ TD + +L L Sbjct: 271 GKQDAMLSRDLAKILTDAPVTISLSDLNY 299 >UniRef50_Q7UI29 DNA polymerase I n=1 Tax=Rhodopirellula baltica RepID=Q7UI29_RHOBA Length = 1027 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 78/253 (30%), Positives = 131/253 (51%), Gaps = 12/253 (4%) Query: 5 LLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 +++VDA +LI ++ V + +L+ P + +A FD Sbjct: 130 VVVVDAHSLIYQVFHALPPMTSTGGLPVSAVYGFVGDMLELLSRKNPDYLIAAFDKS--E 187 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +R++ P+YKA R MP+EL ++P +R A + G+ SG EADDL AT+A KV Sbjct: 188 VTFRNELYPEYKANRDSMPDELRQQIPLIRQAIDAMGIGIIEQSGFEADDLLATVAAKVE 247 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 +AG + +V++DK QL+S +I + + + +DA + +G++P Q+ DY L G Sbjct: 248 EAGGRCLVVTSDKDCRQLISDQTKIYNIRKDQEIDAAELFGLWGIRPDQVVDYQALVGDP 307 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR-KKLETHKEMAFLCRDIARL 234 VPG++ IGPK A QLL +LE I N ++++ K R + L +E A + R++ L Sbjct: 308 VDNVPGISLIGPKIAQQLLETHDTLEEILNNAESISGKKRKENLMNGREAAMMSRELVEL 367 Query: 235 QTDLHIDGNLQQL 247 + D+ + Sbjct: 368 KRDVESPIPWNRC 380 >UniRef50_C4GAN0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GAN0_9FIRM Length = 910 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 20/267 (7%) Query: 1 MAV--HLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 MA LL++D +++ R Q + V + L + + +P H F Sbjct: 1 MAEQSKLLLIDGHSILNRAFYGLPDLTNSKGQHTNAVYGFLNILFKTMEEEKPDHLTVAF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH+ DYK R PM EL +++P ++ G+ + G EADDL T Sbjct: 61 DLSAPT--FRHRMFADYKGTRKPMAAELREQVPMIKEMLAAMGICLVTKEGLEADDLLGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW------LDAPFIDKEFGVQPQ 163 ++ AG TI+S D+ QL + ++I K+ A + + + V P Sbjct: 119 MSKIGEAAGMDVTILSGDRDLLQLATDKVKIMIPKTKKGGTETESYYAKDVRETYQVSPT 178 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHK 222 + D L G ++ +PGV GIG K+A ++ + S+E +E+ + + + + + Sbjct: 179 EFIDVKALWGDTADNIPGVPGIGEKTAINIIAAYGSIEAAHEHAEDLKPPRAARNIVDFW 238 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQLRL 249 + A L + +A + ID +L ++ Sbjct: 239 DQARLSKTLATIDVHAKIDYDLAAAQI 265 >UniRef50_B0MYJ0 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYJ0_9BACT Length = 959 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 17/262 (6%) Query: 3 VHLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 L +VDA LI + + + V L + P FD Sbjct: 2 KKLFLVDAYALIFKYYYAFMGRPMRNRAGMNTSVVFGFTKFLRDIQKREHPDLLGVAFDP 61 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + S +R + P+YKA R PE++ +P ++ E +P G EADD+ TLA Sbjct: 62 KGGS--FRREIFPEYKANRAETPEDILLSVPYVKRIVEAMCIPVLEVPGYEADDVIGTLA 119 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK---RWLDAPFIDKEFGV-QPQQLPD 167 K +AG+ +V+ DK Y QL+ +I + I +++G+ PQ + D Sbjct: 120 HKGVEAGYDVFMVTPDKDYGQLVCDNCKIYKQKGNDGIEIVGREAIREKYGIENPQLVRD 179 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 L G +S +PGV GIG K+A +L+ E+ ++E I +N D + + +K+ + L Sbjct: 180 ILALWGDASDNIPGVPGIGEKTACKLVQEWGTVENILQNADRIKSRQGEKIAEWGDKLLL 239 Query: 228 CRDIARLQTDLHIDGNLQQLRL 249 + + + D+ ID + L + Sbjct: 240 AKRLTTICLDVPIDFREEDLTV 261 >UniRef50_D2QFD0 DNA polymerase I n=3 Tax=Bacteria RepID=D2QFD0_9SPHI Length = 1024 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 18/263 (6%) Query: 2 AVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 L ++DAL LI R H + V +A+ +++ +PTH FD Sbjct: 5 TKKLFLLDALALIYRAHFAFSKSPRISSRGINTSAVFGFMNAMIEVLTKEKPTHIGVAFD 64 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 ++ +RH+ P YKA R PE++ MP ++ E +P G EADD+ T+ Sbjct: 65 SAKKT--FRHESFPMYKANRQSQPEDISVAMPYIKQIVEAMHIPMLILDGYEADDIIGTI 122 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDY----FQKRWLDAPFIDKEFGVQP-QQL 165 A K A + +++ DK Y QL+ + I L + + + ++ +Q+ Sbjct: 123 AKKAALADFEVYMMTPDKDYGQLVEEHIHIYKPAFMGKPAEKLGVTEVLERWQIERIEQV 182 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 D GL G S +PG+ GIG K+A +L+ +F S+E + D + K ++ + + Sbjct: 183 TDMLGLMGDSVDNIPGIPGIGEKTAQKLIADFGSVENLIARADELKGKLKENVVNFAQQG 242 Query: 226 FLCRDIARLQTDLHIDGNLQQLR 248 + +++A + D+ + + + LR Sbjct: 243 LMSKELATIHLDVPVPFDEEHLR 265 >UniRef50_UPI0001C32326 DNA polymerase I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32326 Length = 884 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 18/262 (6%) Query: 2 AVHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 L ++D +L R + + L +++ P + +D Sbjct: 25 PDELFLIDGNSLAYRAFFALPESIATSTGFPTNAIFGFASMLVKILTEYGPRATIVAWDR 84 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + R + P+YKA R P+ + P L E G S G EADD+ ATLA Sbjct: 85 GHSG---RREVYPEYKAQRSSRPDLFKQQWPHLEPLVESFGYQNVSLDGYEADDVIATLA 141 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRI----RDYFQKRWLDAPFIDKEFGVQPQQLPD 167 + AG +V+ D+ QL+ ++I R + R D + +G+ P+ +PD Sbjct: 142 ERAKAAGIPVMVVTGDRDSFQLVDEGVQIMATSRGITETRTYDRQGVIDRYGIPPELVPD 201 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAF 226 + GL G +S +PGV GIG K+A QLL +F LEG+ N + K R+ L H E A Sbjct: 202 FIGLKGDTSDNIPGVPGIGDKTAAQLLNDFGDLEGVLANAHTIRARKRRENLIEHAEDAR 261 Query: 227 LCRDIARLQTDLHIDGNLQQLR 248 + + +A ++ DL + ++ + Sbjct: 262 VSKQLATMRRDLEVAIDVAAVH 283 >UniRef50_Q73M72 DNA polymerase I n=1 Tax=Treponema denticola RepID=Q73M72_TREDE Length = 936 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 16/261 (6%) Query: 1 MAVHLLIVDALNLIRRIHAV---------QGSP--CVETCQHALDQLIMHSQPTHAVAVF 49 M + ++DA LI R + +G + +L + P V Sbjct: 1 MKDTIYVLDAYGLIYRSYFAFISRPLTNSKGENVSAIFGFFKSLHSIFTEYNPKLFVTAL 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH+ +YKA R P++LH ++ + + +P +G EADD+ A+ Sbjct: 61 DS--LTPTFRHEMYKEYKATRDKTPDDLHAQIDKIEEILKTFKLPTVRCNGFEADDVIAS 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQ---KRWLDAPFIDKEFGVQPQQLP 166 +A + G + ++S DK QL+S T + + DA + +E+GV P + Sbjct: 119 IAALAEKEGRECVVISGDKDLMQLVSKTTTMLKPGKIKAWEGFDAENVKEEWGVYPDGML 178 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D L G S+ VPG+ G+GPK+A +LL E++SL+GIY N + + K+E KE A+ Sbjct: 179 DLLSLIGDSADNVPGIKGVGPKTAVKLLEEYKSLDGIYANTGNLKGALKTKIEEGKESAY 238 Query: 227 LCRDIARLQTDLHIDGNLQQL 247 +++ RL+ D+ ++ +L Sbjct: 239 FSKELIRLRFDVPVEKDLNAY 259 >UniRef50_B9YEU0 DNA polymerase I n=2 Tax=Cyanobacteria RepID=B9YEU0_ANAAZ Length = 982 Score = 270 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 27/272 (9%) Query: 4 HLLIVDALNLIRRIHAV--------------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 ++VD +L R + + L ++I +P F Sbjct: 20 TFILVDGHSLAFRSYFAFAKGKNGGLRTKAGIPTSVCFGFIKCLLEVITTQKPQAIAVAF 79 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH+ YKA R PE+ ++ L +P ++ G EADD+ T Sbjct: 80 DLGLPT--FRHEADDTYKADRLETPEDFIPDLENLNELLRGLNLPIFTAPGYEADDVLGT 137 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLS--PTLRIRDYFQK---------RWLDAPFIDKEF 158 L+ K + AG++ I+S D+ QL+ + + ++ + A + ++ Sbjct: 138 LSQKASAAGYRVKILSGDRDLFQLIDGDKGITVLNFSPEALKRYANSITEFQAEQVKEKL 197 Query: 159 GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL 218 GV P Q+ D+ L G S +PGV GIG K+A +LL + SL+GIY LD + ++KL Sbjct: 198 GVLPTQIVDFKALCGDKSDNIPGVRGIGEKTAVKLLNTYNSLDGIYAKLDEITGSTQEKL 257 Query: 219 ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 KE A R +A++ D+ ++ NL+ +L Sbjct: 258 IAGKEDASHSRYLAQIVVDVPLEVNLEDCQLT 289 >UniRef50_Q8NWQ2 MW1329 protein n=63 Tax=Staphylococcaceae RepID=Q8NWQ2_STAAW Length = 292 Score = 270 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 20/258 (7%) Query: 1 MAVHLLIVDALNLIRRIHAVQ-------------GSPCVETCQHALDQLIMHSQPTHAVA 47 M +L+VD + L+ R + ++ + I +PTH Sbjct: 1 MPNKILLVDGMALLFRHFYATSLHKQFMYNSQGVPTNGIQGFVRHIFSAIHEIRPTHVAV 60 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 +D + +R+ YK R PEEL + ++ EQ G EADD+ Sbjct: 61 CWDMGQST--FRNDMFDGYKQNRSAPPEELIPQFDYVKEISEQFGFVNIGVKNYEADDVI 118 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQ 163 TLA + + I++ DK Q ++ + + + ++E+ ++PQ Sbjct: 119 GTLAQQYSTDN-DVYIITGDKDLLQCINDNVEVWLIKKGFNIYNRYTLHRFNEEYALEPQ 177 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 QL D G ++ GV GIG K+A +L+ ++QS+E + EN+DA++ R K+ + + Sbjct: 178 QLIDIKAFMGDTADGYAGVKGIGEKTAIKLIQQYQSVENVVENIDALSAGQRNKINDNLD 237 Query: 224 MAFLCRDIARLQTDLHID 241 +L + +A + T + ID Sbjct: 238 ELYLSKRLAEIHTQVPID 255 >UniRef50_D0RQG2 DNA polymerase I n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQG2_9RICK Length = 925 Score = 270 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 123/267 (46%), Gaps = 20/267 (7%) Query: 2 AVHLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMHSQ-------PTH 44 HL ++D I R + G P V + L + ++ PTH Sbjct: 4 EKHLFLIDGSGYIFRAYYALPPLTRKSDGLPVGAVSGFCNMLYSFLEKAKAGNTMDTPTH 63 Query: 45 AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEAD 104 +FD + +R+ DYK R PE+L + +R A + +P EAD Sbjct: 64 LAVIFDSARK--NFRNDIYKDYKGNRSDAPEDLIPQFDYIRKAVKAFNLPSIEMLNYEAD 121 Query: 105 DLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQ 164 DL AT K + + TIVS+DK QL+ + D + R + + ++FGV P++ Sbjct: 122 DLIATYKEKAKKKKIKITIVSSDKDLMQLVDKETFMLDTMKDRHIGIEEVKEKFGVPPEK 181 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKE 223 + D LAG S +PGV GIG K+A +L+ +F SL+ + + D + K R+ L +K+ Sbjct: 182 VIDVQSLAGDSVDNIPGVPGIGVKTAAELINQFGSLDELLKKADTIKQPKRRQTLLDNKK 241 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRLV 250 A + R++ L+ D+ I ++ L Sbjct: 242 NALISRELVTLKCDVPIKEEIEDFILK 268 >UniRef50_Q5HCC8 DNA polymerase I n=14 Tax=Rickettsiales RepID=Q5HCC8_EHRRW Length = 865 Score = 270 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 17/263 (6%) Query: 1 MAVHLL----IVDALNLIRRIHAVQGS---------PCVETCQHALDQLIMHSQPTHAVA 47 M + L+ I+DA L+ R + V + L + I + V Sbjct: 1 MHLTLMSIFTIIDAYGLLFRAYYALPHLSTSNGVPIGGVYGFINMLLKYIEVHTANYLVV 60 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 FD + +RH P YK+ R +PE+L + P LR A + +G EADD+ Sbjct: 61 AFDTGGK--NFRHDIYPQYKSNRIKLPEDLISQFPLLREAVNALNISYEEVAGYEADDVI 118 Query: 108 ATLAVKVTQ-AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLP 166 ATL+ ++ G + T+V++DK QLL + I D + +++ + +FG+ +L Sbjct: 119 ATLSKNYSKFDGIKVTVVTSDKDLLQLLEHNIHIFDPVKNKYIVEDDVQDKFGISSSKLL 178 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMA 225 D+ L G +S +PGV GIG K+A +LL F SL+ + A+ K R+ + +++ A Sbjct: 179 DFLSLTGDTSDNIPGVPGIGIKTAAKLLNNFGSLDNLLSQPHAIEKNKCRESIIKYQDQA 238 Query: 226 FLCRDIARLQTDLHIDGNLQQLR 248 L R + L +++D N+++ R Sbjct: 239 ILSRQLLTLCDTVNLDNNIEKYR 261 >UniRef50_Q2GI23 DNA polymerase I n=6 Tax=Rickettsiales RepID=Q2GI23_EHRCR Length = 944 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 127/260 (48%), Gaps = 14/260 (5%) Query: 3 VHLL-IVDALNLIRRIHAVQGS---------PCVETCQHALDQLIMHSQPTHAVAVFDDE 52 + + I+DA L+ R + + V + + I + V VFD Sbjct: 1 MRVFTIIDAYGLLFRAYYALPNLRTSYGLPIGGVYGFINIFLKYIEKHVTDYLVVVFDTG 60 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +RH P+YK RP +P++L + LR A + G EADD+ ATL+ Sbjct: 61 SK--NFRHNIYPEYKGNRPKLPDDLIPQFSLLREAVNAFNIASEEVVGYEADDVIATLSK 118 Query: 113 KVTQ-AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 K + G + T+V++DK QLL + I D + ++++ + +FG+ QL D+ L Sbjct: 119 KYCKLQGVKVTVVTSDKDLLQLLKYNICIFDPIKNKYIEEEDVQSKFGISSNQLLDFLSL 178 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLCRD 230 G +S VPG+ GIG K+A +LL +F SL+ + ++ V K R+ + + + A L R Sbjct: 179 TGDASDNVPGIPGIGVKTAAKLLNDFGSLDNLLLHVHEVKTNKCRESITQYSDQAILSRQ 238 Query: 231 IARLQTDLHIDGNLQQLRLV 250 + L ++ I G++++ Sbjct: 239 LVTLCDEVDICGDIEKYSFQ 258 >UniRef50_Q118S8 DNA polymerase I n=4 Tax=Cyanobacteria RepID=Q118S8_TRIEI Length = 1045 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 23/267 (8%) Query: 6 LIVDALNLIRRIHAV--------------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 L VD +L R + + +L ++I +P + FD Sbjct: 9 LFVDGHSLAFRSYYAFAKSRNGGLKTSTGIPTSICFGFLKSLLEVINTQKPEYLAIAFDL 68 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RH+ +YKA RP PE+L ++ L+ + + + G EADD+ TLA Sbjct: 69 GKPT--FRHEADKNYKADRPEPPEDLIIDLGNLQDLLKAFNLTVITAPGYEADDILGTLA 126 Query: 112 VKVTQAGHQATIVSTDKGYCQLLS--PTLRIRDYFQKR-----WLDAPFIDKEFGVQPQQ 164 K + G + I+S D+ QL+ + + + + ++ G+ P Q Sbjct: 127 KKASATGFKVKILSGDQDLFQLIDAEKGISVLHLPGGKGSIPQEFFPEEVKEKLGILPTQ 186 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + DY L G S +PGV GIG K+A +LL E+ L IY +L+ + +KKL K Sbjct: 187 VVDYKALCGDKSDNIPGVRGIGQKTAVKLLNEYGCLSEIYASLEQIKGANKKKLVLGKTE 246 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRLVR 251 A + +A+++ ++ ++ +++ + + Sbjct: 247 AEHSQFMAKIEVNVPLNIDIEDCKFKK 273 >UniRef50_B4S5F3 DNA polymerase I n=12 Tax=Chlorobiaceae RepID=B4S5F3_PROA2 Length = 950 Score = 269 bits (689), Expect = 6e-71, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 116/262 (44%), Gaps = 18/262 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFD 50 L ++D + L+ R + L ++ P + FD Sbjct: 34 KPELFLLDGMALVYRAFFALQRADMKTRDGVPTGAAFGFLTTLLKIYETYAPDYLAVAFD 93 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 R +RH+R YKA RP PE+L ++ + E +P G EADDL T Sbjct: 94 S--REKTFRHERYDAYKANRPQPPEDLITQLDFIFRLIEAFNIPILKQPGYEADDLIGTA 151 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFGVQPQQLP 166 A + + IVS DK QL+ + + +++ A + +E G+ P Q Sbjct: 152 AREFEPE-CRINIVSPDKDMTQLIHDGVTLLKPGKRQNELLRFGAAELKEELGIAPDQFI 210 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D L G SS +PG GIGPK+A++LL+ + SL+ I +NL+ + + RK LE Sbjct: 211 DLLTLTGDSSDNIPGAKGIGPKTASKLLLSYGSLDEISKNLEKLPPRTRKSLEEFLPERE 270 Query: 227 LCRDIARLQTDLHIDGNLQQLR 248 L RD+ ++TD+ + L L+ Sbjct: 271 LIRDLVTIKTDIDLQTPLASLQ 292 >UniRef50_P74933 DNA polymerase I n=3 Tax=Bacteria RepID=DPO1_TREPA Length = 997 Score = 269 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 83/259 (32%), Positives = 124/259 (47%), Gaps = 16/259 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQGS-----------PCVETCQHALDQLIMHSQPTHAVAVFD 50 L ++DA LI R + V +L L+ H +P + VAVFD Sbjct: 4 KKTLYLLDAYGLIYRSYHAFARAPLINDSGANVSAVYGFFRSLHTLLCHYRPRYFVAVFD 63 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +RH + P YKA R EL+ ++P + G+ G EADDL ATL Sbjct: 64 S--LTPTFRHVQYPAYKAKRDKTSAELYAQIPLIEEILCALGITVLRHDGFEADDLIATL 121 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDY---FQKRWLDAPFIDKEFGVQPQQLPD 167 A +V I+S+DK QL+ T+++ + DA ++ + + V P QL D Sbjct: 122 AKRVAAEHCHVVIISSDKDVLQLVCDTVQVLRLDIDHKWTCCDAAYVQQRWTVMPTQLLD 181 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 + L G SS VPGV GIGPK+A LL F +L+GIY + ++ E R K+ K+ AF Sbjct: 182 LFSLMGDSSDNVPGVRGIGPKTAAHLLHCFGTLDGIYRHTYSLKEALRTKIVCGKKDAFF 241 Query: 228 CRDIARLQTDLHIDGNLQQ 246 R + L+ D+ +L+ Sbjct: 242 SRSLIELRDDVPCVFSLED 260 >UniRef50_Q14QK7 DNA polymerase I n=1 Tax=Spiroplasma citri RepID=Q14QK7_SPICI Length = 869 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 18/255 (7%) Query: 3 VHLLIVDALNLIRRIHAVQ-------------GSPCVETCQHALDQLIMHSQPTHAVAVF 49 +L++D +L+ R + V + L++++ + V F Sbjct: 2 KKVLLIDGNSLLFRAFYATAYNGEMLKSLDGTPTNAVYAFTNMLNKILKANNYYSVVVAF 61 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH L DYK GR P EL + P ++ + +P G EADDL Sbjct: 62 DKGKK--NFRHDLLVDYKDGRSKTPNELIVQFPIVKEFLDSYQIPYLEQEGYEADDLLGC 119 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR---WLDAPFIDKEFGVQPQQLP 166 LA+ + I S+DK QL++ I Q +D + ++G++P Q+P Sbjct: 120 LAMLAEKEDFYVDIFSSDKDLYQLITNKTNILVPRQGDSADVIDEAALIAKWGIKPLQVP 179 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D GL G S + GV +G K+A +L+ E+ S+E +Y+N++ + ++ L HKE A Sbjct: 180 DLKGLMGDPSDNLKGVPKVGEKTAIKLIKEYHSIENLYDNIEHIKGALQQNLLNHKESAL 239 Query: 227 LCRDIARLQTDLHID 241 LC+ IA + D++++ Sbjct: 240 LCKKIATIFCDINLE 254 >UniRef50_Q67KY2 DNA polymerase I n=1 Tax=Symbiobacterium thermophilum RepID=Q67KY2_SYMTH Length = 283 Score = 268 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 71/257 (27%), Positives = 112/257 (43%), Gaps = 14/257 (5%) Query: 5 LLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 +L+VD L+ R + V L +L+ +P+H D + Sbjct: 1 MLLVDG-GLMFRTFFALPPMTDPKGRPVNAVYGFVSMLLRLLATLRPSHVAVAADSPV-A 58 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 R P YKA RP P +L + LR + G EADDL T+A Sbjct: 59 ENRRAVLYPPYKANRPECPPDLAPQFALLREVLAALNITVVGVRGYEADDLMGTMARMAE 118 Query: 116 QAGHQATIVSTDKGYCQLLSPTL---RIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 G + +++ D+ QLLS ++ Q D E+G+ P QL D GLA Sbjct: 119 AEGMEVILLTGDRDAFQLLSGRTAVQYVKRLNQTITYDVARFVTEWGILPSQLADLKGLA 178 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIA 232 G +S +PG+ GIGPK+A +LL ++ +LE + + A K R++LE +E+A L + +A Sbjct: 179 GDASDNIPGIRGIGPKTAVRLLQQYVTLEAVLAHAHAQPGKLRQRLEEGREIALLSKRLA 238 Query: 233 RLQTDLHIDGNLQQLRL 249 + + + L Sbjct: 239 TIDRHVPVSCTPGACAL 255 >UniRef50_C7RDU0 DNA polymerase I n=3 Tax=Anaerococcus RepID=C7RDU0_ANAPD Length = 879 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 67/264 (25%), Positives = 129/264 (48%), Gaps = 16/264 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ ++++D +LI R + V + +P + + FD Sbjct: 1 MSKTVMLIDGSSLIFRAFFALPKLTNNDGVMTNGVYGFLTMYNNAFDRYKPDYVLVAFDR 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 +++ +RH+ DYK R MP EL + L+ + V G EADD+ T A Sbjct: 61 ASKT--FRHKEFEDYKGTRDKMPSELSYQFGILKDILDSLNVKYTDLDGFEADDIVGTYA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 +AG+++ +++ D+ Y QL+ + + + + I +EFG+ P+QL + Sbjct: 119 KMAQEAGYESVLITGDRDYLQLVDEKIVVNLTKKGVSETKEYTVDTIKEEFGLSPKQLIE 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW-RKKLETHKEMAF 226 GL G S +PGV GIGPK A + ++ S+EG+Y+++D V+ K ++ L + +A+ Sbjct: 179 VKGLEGDKSDNIPGVDGIGPKKAIGFIQKYGSIEGLYDHIDEVSGKKTKQTLIDSEAIAY 238 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 + + I + T ++ +L++L++ Sbjct: 239 MSKKIGTIVTSAPVEFDLEELKVK 262 >UniRef50_UPI0001C17162 DNA polymerase A n=2 Tax=Nostocaceae RepID=UPI0001C17162 Length = 988 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 27/272 (9%) Query: 4 HLLIVDALNLIRRIHAV--------------QGSPCVETCQHALDQLIMHSQPTHAVAVF 49 +++VD +L R + + L +I+ QP F Sbjct: 12 TIILVDGHSLAFRSYFAFAKSRAGGLRTKSGIPTNVCFGFMQCLLDVIVKEQPQAIAVAF 71 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D + +RH+ +YKA R PE+ ++ L E + + G EADD+ T Sbjct: 72 DLAAPT--FRHEADSNYKANRADTPEDFIPDLVNLYDLLEALNIQVITQPGYEADDILGT 129 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPT--LRIRDYFQK---------RWLDAPFIDKEF 158 LA +G++ I+S D+ QL+ + + ++ + + + ++ Sbjct: 130 LAETSVCSGYRVKILSGDRDLFQLIDENKGISVLNFTPEALKSSSNGIKEFHTLDVKEKL 189 Query: 159 GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL 218 GV P Q+ D+ L G +S +PGV GIG K+A +LL ++SL IY N++ + ++KL Sbjct: 190 GVLPTQVVDFKALCGDTSDNIPGVKGIGEKTAVKLLNIYKSLTEIYANINKITGANQQKL 249 Query: 219 ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 +E AF + +A++ TD+ I +Q L Sbjct: 250 IAGQESAFHSQYLAKIVTDVPITIKIQDCHLK 281 >UniRef50_Q2GD93 DNA polymerase I n=2 Tax=Neorickettsia RepID=Q2GD93_NEOSM Length = 829 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 12/259 (4%) Query: 1 MAVHLLIVDALNLIRRIHAVQGS--------PCVETCQHALDQLIMHSQPTHAVAVFDDE 52 M+ L+I+DA N + + + V + L + + ++P + V D Sbjct: 1 MSETLMIIDAYNFLFSAYFALPNLTHNELPVGAVYGFLNILLKHLR-TKPEYLVVALDHG 59 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R +YKA RPP+P L + LR + + G EADD+ ATL Sbjct: 60 KST--FRETIYNNYKANRPPVPGNLTPQFALLRECVDVLNLNPLEIEGFEADDVIATLVR 117 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 K +++ + I+STDK QL++ + + + + R + + ++FGV P Q+ D+ L Sbjct: 118 KFSKSDLKIKILSTDKDLMQLVNENVHVINPIKNRIIGVNEVKEKFGVFPTQMTDFLSLV 177 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIA 232 G +S +PGV GIG K+A +LL F ++E N + + ++ L H + L + + Sbjct: 178 GDTSDNIPGVPGIGVKTAAKLLNTFGAIENFRLN-EISPARIKESLLRHHDQLTLSKRLV 236 Query: 233 RLQTDLHIDGNLQQLRLVR 251 L D++I +L +R + Sbjct: 237 SLVDDINIQCSLDCIRYQQ 255 >UniRef50_Q6MEQ2 Probable DNA polymerase I n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEQ2_PARUW Length = 891 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 125/259 (48%), Gaps = 12/259 (4%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L I+DA I R + + + + ++ +LI PTH VAVFD N Sbjct: 2 DKLYILDASGYIYRSYFAIRQMTNARGESTNALFGFIRSVLKLIKDFNPTHLVAVFDGPN 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 +S R + P YKA R MP++L ++ + + G+P G EADD ++A Sbjct: 62 -NSQKRTELYPAYKAHRKEMPKDLLYQILWSQRFCQLMGIPELMVPGVEADDTMGSIAKW 120 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR-WLDAPFIDKEFGVQPQQLPDYWGLA 172 A I ++DK CQL+S + I + F+ +DA + ++FGV P Q+ DY + Sbjct: 121 AATLNTTAYICTSDKDMCQLVSNQILILNTFKDNLIIDANGVKEQFGVMPAQMIDYLAII 180 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRK-KLETHKEMAFLCRDI 231 G +S +PG+ G GPK+A LL +F SL+ I E+ V+ K ++ L + KE L + + Sbjct: 181 GDASDNIPGLTGFGPKTAADLLEKFGSLDYILEHPLEVSGKKKQDTLISEKEKVLLSKKL 240 Query: 232 ARLQTDLHIDGNLQQLRLV 250 + T + +L Sbjct: 241 VIVDTTVSFPNQEDFFKLT 259 >UniRef50_B1VB35 DNA polymerase I n=1 Tax=Candidatus Phytoplasma australiense RepID=B1VB35_PHYAS Length = 676 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 65/266 (24%), Positives = 126/266 (47%), Gaps = 21/266 (7%) Query: 3 VHLLIVDALNLIRRIHAVQG--------------SPCVETCQHALDQLIMHSQPTHAVAV 48 HL++VD +L+ R + + + + ++++ ++ + + Sbjct: 2 QHLVLVDGNSLVFRAYHATANNGKKLLQNKKGVYTNALLSFIKMFEKILEQTK-NYILVA 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + + RHQ +YK GRP P+EL D++P ++ +GV + EADD+ Sbjct: 61 FDTHHPT--KRHQMYDNYKKGRPETPQELIDQIPLIKKYLTLKGVKHHFQAEFEADDIIG 118 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQ 164 TLA + + +I S+D+ QL+ + + + + + +E+G++ Q Sbjct: 119 TLAKMASNKNIKVSIYSSDQDLLQLVDTNTSVYLIKKGLKLIKHYNPKTLLEEYGLKEYQ 178 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + DY L G SS + GVAGIGPK+A LL + +L+ + +LDA+ ++K+ E Sbjct: 179 MIDYKALMGDSSDNIKGVAGIGPKTAKNLLQTYDNLDNLLSHLDAIKPSLKEKINNCMED 238 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRLV 250 L + + + T + + L+Q + Sbjct: 239 LKLSKILTTIDTKVPLPFELEQTEIK 264 >UniRef50_C0E901 Putative uncharacterized protein (Fragment) n=2 Tax=Clostridiales RepID=C0E901_9CLOT Length = 890 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 17/263 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 A+ +L VD +++ R + + V + +D++I +P FD Sbjct: 40 AMKVLAVDGNSILNRSYYGVRNLSNSKGVPTNAVFGFFNVMDKMIKEVEPDCVAVAFDLS 99 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH++ YKAGR MPEEL ++P + + G G EADD+ T A Sbjct: 100 APT--FRHKQYDGYKAGRKGMPEELAVQLPITKELIQLFGYHIVECEGFEADDIMGTFAR 157 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR--WLDAPFIDKEFGVQPQQLPDYWG 170 + + I + D+ QL+ + +R K D I +E+GV P +L + Sbjct: 158 LCREQKAECVIATGDRDNLQLVGDGVTVRLATNKEAILFDTDKIVQEYGVTPPELIEVKA 217 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR-KKL---ETHKEMAF 226 L G SS +PGV GIG K+A L+ ++ S+ I ++ + R K L E +E+A Sbjct: 218 LMGDSSDNIPGVKGIGEKTALSLVSKYHSVSYILDHAQELDATTRVKNLLSAEGARELAE 277 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 + R + + + IDG+L + Sbjct: 278 MSRMLGTIVDNAPIDGDLSHYAV 300 >UniRef50_A9BEU8 DNA polymerase I n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEU8_PETMO Length = 896 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 20/266 (7%) Query: 1 MAVHLLIVDALNLIRRIHAVQG----------SPCVETCQHALDQLIMHS---QPTHAVA 47 MA L ++D + R G + + L +L+ + Sbjct: 1 MAN-LYLIDGSGIAYRAFFALGDWMSTSDGLPTNAIYGVARMLLKLLKEYVKKGEDSIIF 59 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 V D +++ +RH+ L YKA RP PE+ ++P + E+ G+ + EADD+ Sbjct: 60 VMD--KKTTTYRHELLESYKAQRPETPEKYIQQIPYIYEMVEKLGIKLVAMDNYEADDVI 117 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW----LDAPFIDKEFGVQPQ 163 AT+ K + I+++DK QL+ + I Q DA ++K+ GV P+ Sbjct: 118 ATIVSKKKRNYDNVYIITSDKDMMQLVKDNVYILRPEQGITEMVKYDAQQVEKKMGVPPE 177 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 ++ D L G SS +PGV GIG K+A +LL ++ +++ +Y++LD + + KL+ KE Sbjct: 178 KIADLLALMGDSSDNIPGVKGIGIKTAQKLLQDYDNIDDLYQHLDEIKGSTKNKLKNEKE 237 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRL 249 A+L + + +L D I+ + + Sbjct: 238 TAYLSKKLVQLMVDAPIEEIFEDKEI 263 >UniRef50_UPI0001BC5C75 DNA polymerase I n=3 Tax=Fusobacterium RepID=UPI0001BC5C75 Length = 894 Score = 265 bits (679), Expect = 9e-70, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 132/263 (50%), Gaps = 15/263 (5%) Query: 3 VHLLIVDALNLIRRIHAVQ--------GSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 L++D ++ R + + V +L QL+ + + A FD + R Sbjct: 2 KRALLLDVSAMMYRAYYANMNMRTKEMPTGAVYGFLLSLFQLLKEYESEYMAAAFDIK-R 60 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 S R + +YK+ R PE+L ++P + A + G+ G EADD+ +L+ K+ Sbjct: 61 SHLKRTELYAEYKSNRDTTPEDLVKQIPYIEAILDAFGIQRIKIDGYEADDILGSLSTKL 120 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 ++ G TIV+ DK QLL I ++ + V P+++PD +GL G Sbjct: 121 SKKGIPVTIVTGDKDISQLLDENTEIYLLGKEVLKTREDVKNYIDVYPEKIPDLFGLIGD 180 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA------EKWRKKLETHKEMAFLC 228 SS +PGV IGPK A +L ++ +LEGIYEN+D ++ + + ++ KE+AFL Sbjct: 181 SSDCIPGVRKIGPKKAVPMLEKYGNLEGIYENIDKLSELPGVGKTLIQIMKEDKELAFLS 240 Query: 229 RDIARLQTDLHIDGNLQQLRLVR 251 R +A+++ +L +L++L+ + Sbjct: 241 RSLAKIERNLDFPFSLEELQFEK 263 >UniRef50_Q9HT80 DNA polymerase I n=9 Tax=Gammaproteobacteria RepID=DPO1_PSEAE Length = 913 Score = 265 bits (679), Expect = 9e-70, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 20/265 (7%) Query: 1 MAV-HLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 M+ L++VD + + R + + V+ + L L + VFD Sbjct: 1 MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFD 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + + +R + +YKA RP MP++L ++ L A+ G+P G EADD+ TL Sbjct: 61 AKGPT--FRDELFAEYKANRPSMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTL 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 A A I + DK QL+ + + + LD + ++FGV P+ + D+ Sbjct: 119 ARSSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSRLDVDGVKEKFGVGPELIIDFLA 178 Query: 171 LAGISSSKVPGVAGIGPKSA-TQLLVEFQSLEGIYENLDAVA-------EKWRKKLETHK 222 L G +PGV G+G K+A L LE +Y +LD V + KLE ++ Sbjct: 179 LMGDKVDNIPGVPGVGEKTALGLLTGVGGGLEVLYASLDKVPELPIRGAKGLPAKLEENR 238 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQL 247 E AFL +A ++TD+ +D + +L Sbjct: 239 EQAFLSYQLATIKTDVELDVEIDKL 263 >UniRef50_B6YQQ9 DNA polymerase I n=13 Tax=Bacteroidales RepID=B6YQQ9_AZOPC Length = 928 Score = 265 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 124/261 (47%), Gaps = 19/261 (7%) Query: 3 VHLLIVDALNLIRRIHA-----------VQGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 + L ++DA LI R + + + + LD ++ PTH FD Sbjct: 1 MKLFLLDAYALIYRAYYSFIKMPLINSKGFNTSAIFGFVNTLDNILRRENPTHIGVAFDP 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +RHQ YKA R PE + +P ++ +P SG EADD+ T+A Sbjct: 61 IEPT--FRHQVFKQYKAQREETPETIRLSIPIIKDIVSAYHIPILEVSGYEADDVIGTVA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR----WLDAPFIDKEFG-VQPQQLP 166 K T ++ +++ DK Y QL+ + I ++ L I +++G + P Q+ Sbjct: 119 KK-TSRDYEIFMMTPDKDYGQLVDEHIFIYKPRYRKDGFEILGVKEIKEKYGFISPIQMI 177 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D+ GL G SS +PG GIG +A +L+ F S+E + +N+ + + K+E +KE Sbjct: 178 DFLGLMGDSSDNIPGCPGIGEITAKKLIARFGSIENLLKNVHFLNGILKTKIERNKETIL 237 Query: 227 LCRDIARLQTDLHIDGNLQQL 247 + +A ++TD+ I+ N +L Sbjct: 238 FSKFLATIKTDVPINFNPNEL 258 >UniRef50_A0RC28 5'-3' exonuclease n=75 Tax=Bacillus RepID=A0RC28_BACAH Length = 301 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 20/261 (7%) Query: 3 VHLLIVDALNLIRRIHAVQ-------------GSPCVETCQHALDQLIMHSQPTHAVAVF 49 +L+VD + L+ R + + L + +PTH V + Sbjct: 15 KKVLLVDGMALLFRAFYATSVYGQFMKRQDGTPTNGIHGYMKHLLTAMQAIEPTHIVTCW 74 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D S+ +R + +YKA R PEEL + ++ + VP G EADD T Sbjct: 75 DMG--STTFRTESFSNYKANRAAPPEELIPQFDLVQEMTAKLSVPVIGMKGYEADDCIGT 132 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQL 165 LA + + I++ D QL+ + + + + I +E GV+P Q+ Sbjct: 133 LAKQYCNE-AEVYILTGDTDLLQLVDKNVTVMLLRKGMGNYEYYTPEKIMEEKGVEPWQI 191 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 G +S PGV GIG K+A +L+ E ++ + EN+ ++ + R K+E+ E Sbjct: 192 VHAKAFMGDTSDNYPGVKGIGEKTAYKLIQEHGTVATVLENVASLTKAQRTKIESDLENL 251 Query: 226 FLCRDIARLQTDLHIDGNLQQ 246 + +A++ ++ I +L++ Sbjct: 252 NISLQLAQIHCEVPISCSLEE 272 >UniRef50_Q83GI7 DNA polymerase I n=2 Tax=Tropheryma whipplei RepID=Q83GI7_TROWT Length = 356 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 17/263 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 + L++VD +L R + + L QL+ +H FD Sbjct: 8 SKRLILVDGHSLAFRSFYGTKAIAVVNGVQVNALYGFVNRLTQLLESGPVSHFAVAFDVS 67 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +S +R + P+YK R +PEE ++ ++ GV ++ EADD+ ATL+ Sbjct: 68 RKS--FRTEAYPEYKGTRKKVPEEFFPQVDLIKEFLHLIGVNHFAVQNYEADDIIATLSR 125 Query: 113 KVTQAGH-QATIVSTDKGYCQLLSPTLRIRDYFQKRW-----LDAPFIDKEFGVQPQQLP 166 + G I+S D+ QL++ + + + K + +G++P P Sbjct: 126 LALEEGFSDVRILSGDRDLIQLVNNKVSLLFFSAKHRLGFAVYTPEAVMDRYGIEPHVYP 185 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D L G SS +PG+ IG K+AT LL ++ L+ I E+ ++ + + +A Sbjct: 186 DMAALVGESSDNLPGIKKIGEKTATTLLQKYGCLQKIIESRWEISGVVGQNIRNDYHVAL 245 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 R + L DL + ++ L L Sbjct: 246 RNRKLNTLVNDLPLPASVSDLSL 268 >UniRef50_A7HJZ2 DNA polymerase I n=11 Tax=Bacteria RepID=A7HJZ2_FERNB Length = 898 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 24/272 (8%) Query: 1 MAVHLLIVDALNLIRRIHAVQ----------GSPCVETCQHALDQLIMHS---QPTHAVA 47 MA + + D L+ R + + + L + + + Sbjct: 1 MA-RVFLFDGTGLLYRAYFAIDQSLTTTSGVPTNALYGLSRMLVKFLKEHVIINEDYCAF 59 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 + D + S +R + DYKA RP PE L ++ E G+ G EADD+ Sbjct: 60 MLDVKG-GSTYRKELYADYKAHRPETPEPLLKQISLADELIEGFGIKLIKVPGYEADDVI 118 Query: 108 ATLAVKVTQAGH-----QATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEF 158 ATLA K + + I+++DK QL++ + + + + I +++ Sbjct: 119 ATLAKKFEKEKQKYNISEINIITSDKDMLQLVNENIFVWRVEKGVTDLKKYTNNEIIEKY 178 Query: 159 GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL 218 G+ +Q+ DY L G S +PGV+GIG K+A ++L EF S+E +N+ + EK R + Sbjct: 179 GITSEQIKDYLALVGDVSDNIPGVSGIGEKTAAKILNEFGSVENALKNISKLPEKIRNAI 238 Query: 219 ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 E + E L R + L T++ I ++++L Sbjct: 239 ENNIEDFELSRKLVELNTNVEIKIDIEELLYK 270 >UniRef50_C5B5N3 DNA polymerase I n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5N3_METEA Length = 957 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 88/277 (31%), Positives = 122/277 (44%), Gaps = 32/277 (11%) Query: 4 HLLIVDALNLIRRIHA---------------VQGSPCVETCQHALDQLIMH----SQPTH 44 L++VDA + + R + + L Q + PTH Sbjct: 12 RLILVDASSFVFRAYHQSLNQDPKYNARPSDGLPTGAARLFFAKLFQFVRDGAAGVVPTH 71 Query: 45 AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEAD 104 VFD +R R Q P+YKA R P +L +MP +R A G+P EAD Sbjct: 72 LGIVFDKGSR-ESHRRQLYPEYKANRSETPADLRPQMPLVREAVRAFGLPVIELDRTEAD 130 Query: 105 DLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRD----------YFQKRWLDAPFI 154 DL AT A G + IVS DK QL+SP +R D Y +R LD + Sbjct: 131 DLIATYARAAEAKGAEVVIVSADKDLQQLVSPRIRFYDAESGSKGKPGYRPERNLDVEAV 190 Query: 155 DKEF-GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-E 212 ++ G+QP Q+ D L G +S +PGV GIG K+A QLL+E+ SLE + E A+ Sbjct: 191 VAKWEGLQPGQIGDALALIGDTSDNIPGVPGIGLKTAAQLLLEYGSLEALLEGASAIKQP 250 Query: 213 KWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL 249 K R+ L E A L R + L + + + L L Sbjct: 251 KRRENLLAAAEGARLSRRLVELDCSVDLPVDPDTLAL 287 >UniRef50_C0QYF7 DNA polymerase I n=3 Tax=Brachyspira RepID=C0QYF7_BRAHW Length = 920 Score = 263 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 17/259 (6%) Query: 1 MAVHLLIVDALNLIRRIHA-----------VQGSPCVETCQHALDQLIMHSQPTHAVAVF 49 M LI+DA ++ R H Q + LI + Sbjct: 1 MKKTFLIIDAFGILYRYHFIFLKRPLLNSKGQNVSSINGFMRTYFSLINTYPAEYVAIAL 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D ++ +R++ +YK R MP++L ++P L + G+ EADD+ T Sbjct: 61 DSSRKT--FRNEIYKEYKENRESMPDDLRSQIPILYNLIDALGISRIVLDNYEADDIVGT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK---RWLDAPFIDKEFGVQPQQLP 166 +A + + + I S DK QL+ +++ + DA + ++ GV P Q+ Sbjct: 119 IAERNKKENIKTIIYSPDKDILQLVDDDVKVVASNKDNELMEYDAQAVKEKRGVYPNQII 178 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D L G +S +PGV G+G K+A +LL E++SL+GIYEN+D++ K ++KL K+MA+ Sbjct: 179 DLLSLMGDASDNIPGVKGVGEKTALKLLEEYKSLDGIYENIDSIKGKIQEKLLESKDMAY 238 Query: 227 LCRDIARLQTDLHIDGNLQ 245 + +A ++ ++ NL Sbjct: 239 MSYKLATIERNIE-GFNLD 256 >UniRef50_B0KVB0 Putative 5'-3' exonuclease n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVB0_9BACT Length = 306 Score = 262 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 17/261 (6%) Query: 3 VHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 LLI+D N + R + Q + + L ++ +P + VA D Sbjct: 2 KKLLIIDTFNFLHRAYHALPKTFRGPDGQPTNAIYGFTSMLINVLNQIKPDYVVAALD-- 59 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +R YKA R PM E+L ++P + + + G EADD+ T+A Sbjct: 60 GKEPTFRVGEFTAYKAQRKPMEEDLQTQIPKVFEVLDAFNIKKIVVEGYEADDVIGTVAT 119 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK---RWLDAPFIDKEFGVQPQQLPDYW 169 K+ I+S D+ QL I +K WL +D + G + ++ DY Sbjct: 120 KLKGK-VDILIISNDRDLWQLAGNGNIIMVPGKKGEFEWLGEKEVDAKLGFEADKIADYK 178 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLC 228 GL G S +PGV G+G +AT+LL ++ SLE IY N++ + E +KKL E A + Sbjct: 179 GLRGDPSDNIPGVFGVGEVTATKLLQKYGSLEEIYRNIEKIEPESLKKKLLESYEQALMS 238 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 + +A++ D+ NL++ + Sbjct: 239 KRLAQIVLDVPFQINLEECKY 259 >UniRef50_D1B5M0 DNA polymerase I n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5M0_THEAS Length = 836 Score = 262 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 120/261 (45%), Gaps = 21/261 (8%) Query: 1 MAVHLLIVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFDD 51 M+ L+VD L R G+P V + L +++ +PT FD Sbjct: 1 MSDRFLLVDGHGLAFRAFYALPALSAPDGTPVNAVLGFLNMLYKVLEDQRPTGWAIFFDP 60 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 R + L YKAGR P P+E ++P + E G P G EADD+ A A Sbjct: 61 PG--PVIRREVLESYKAGRRPTPQEFKVQLPIIIDLLEALGHPVHVREGQEADDVIAATA 118 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPD 167 V ++ +G + I+S DK Q++SP++++ + R D +E+ P + D Sbjct: 119 VNLSGSG-EVVILSADKDLLQVISPSVKVCRPVKGVSEFRVYDQEAFLEEYRFPPALMAD 177 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 Y L G S +PGV GIG K A +L+ LE IYE LD ++ RK+LE +E+AFL Sbjct: 178 YLALTGDSVDNIPGVPGIGDKGARELVSSLGPLESIYEALDRLSPAKRKRLEEGRELAFL 237 Query: 228 CRDIARLQTDLHIDGNLQQLR 248 R + L + +R Sbjct: 238 SRQLV-----LPVPTESLDVR 253 >UniRef50_Q6KHF6 DNA polymerase I n=1 Tax=Mycoplasma mobile RepID=Q6KHF6_MYCMO Length = 295 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 73/267 (27%), Positives = 134/267 (50%), Gaps = 20/267 (7%) Query: 1 MAV-HLLIVDALNLIRRIHAVQ-------------GSPCVETCQHALDQLIMHSQPTHAV 46 M++ +L++D L + + V T + + +L+ PTH Sbjct: 1 MSMNKILLIDGNLLAFKSFFATAYIGSSLQTSTGIPTNAVHTFINTIFKLLKELNPTHIF 60 Query: 47 AVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDL 106 FD ++ +RH+ +YK+ R P+ L + ++ + + + S EADDL Sbjct: 61 VAFDKPGKT--FRHEFFEEYKSKRQSTPDSLKVQFIYIKRVLSKMRICWFEESLIEADDL 118 Query: 107 AATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL---DAPFIDKEFGVQPQ 163 AT K+ + + + S+DK QL++ + + + K + + + P Sbjct: 119 IATWVSKINTSKDEVIVYSSDKDLLQLVAKNVSVISKWDKNEYVIDNENNFFERHSIFPN 178 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHK 222 Q+PD+ LAG +S G++GIGPK+A LL EFQ +E +YENL + +K ++ LE K Sbjct: 179 QIPDFKALAGDASDNYLGISGIGPKTAINLLSEFQIIENLYENLANIKSKKVKEVLELEK 238 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQLRL 249 + AFL + IA+L+TD++++ +L+ ++L Sbjct: 239 DKAFLYKKIAKLKTDVNLNFSLEDIKL 265 >UniRef50_Q30VQ3 DNA polymerase I n=7 Tax=Desulfovibrionales RepID=Q30VQ3_DESDG Length = 931 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 111/260 (42%), Gaps = 14/260 (5%) Query: 2 AVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 + ++D I R + + L +L+ QP +A D + Sbjct: 77 KEPVYLIDGSAFIFRGFYAFQNMQRSDGLPTNALFIVLRILLKLLREEQPAYAAFFMDGK 136 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH YKA R PE L ++ +R G+P + G EADD A+LA Sbjct: 137 GPT--FRHALYDQYKANRSATPEPLVQQLDPIRRGVRSLGIPLEVSDGCEADDCIASLAA 194 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDY--FQKRWLDAPFIDKEFGVQPQQLPDYWG 170 K IV DK Q + + + D Q++ LD +E G+ P Q PD+ Sbjct: 195 KFKSE-RPVIIVGADKDLKQCIDDNVYLWDPGAKQEKLLDLAGFTEETGLSPSQWPDFQA 253 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 + G SS +PGV G+GPK+A Q+ EF +LE I EN A+ +KK + +L R Sbjct: 254 VIGDSSDNIPGVPGVGPKTAAQIFAEFPTLEAIQENEKALKPGVQKKFAGQWDNIYLYRR 313 Query: 231 IARLQTDLHIDGNLQQLRLV 250 + L T L+ + + Sbjct: 314 LTTLDTGRCTSLALKDMTVQ 333 >UniRef50_C1A3H5 DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3H5_GEMAT Length = 984 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 26/273 (9%) Query: 2 AVHLLIVDALNLIRRIHAV-----------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 A L ++D LI R + + L +L+ QP V D Sbjct: 9 APRLFLIDGYALIYRAFFALLQRPLSTSRGENTSIAWGIASFLKRLLNTHQPELLAWVHD 68 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMP----ALRAAFEQRGVPCWSTSGNEADDL 106 +R + PDYKA R + ++L + + +P S G EADD+ Sbjct: 69 SGA---TFRDELYPDYKATREKLTDDLQADFDQGLQRVLQLLAAYDIPVLSAPGFEADDV 125 Query: 107 AATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK-------RWLDAPFIDKEFG 159 T+A + +AG+ +VS DK + QL+ P + + + + W+ G Sbjct: 126 IGTMAARGVEAGYNVVVVSGDKDFQQLVRPGVWLLNPGRGGPASVDESWVGVENGSDRLG 185 Query: 160 VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW-RKKL 218 V P+++ DY + G +S VPGV GIG K A +L+ ++ LE I N++ + +K R+ L Sbjct: 186 VPPERVIDYLAIVGDTSDNVPGVKGIGEKGAIELITQYGPLENILANVENITKKRPREAL 245 Query: 219 ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLVR 251 + + + A L + + + D+ + ++L + + Sbjct: 246 QQYADSARLSKQLVTIHCDVPVPFESEKLTVGQ 278 >UniRef50_Q04Q27 DNA-directed DNA polymerase n=4 Tax=Leptospira RepID=Q04Q27_LEPBJ Length = 921 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 20/264 (7%) Query: 3 VHLLIVDALNLIRRIHAVQG----SP--------CVETCQHALDQLIMHSQPTHAVAVFD 50 LLI+D + R + G + L +L+ PTH FD Sbjct: 2 KRLLIIDGHAFVFRAYYAFGASNLTNSKTGKPSGATFGFFKMLFKLLQDYTPTHVAMTFD 61 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 R + DYKA R PMPE+L ++ + E+ G G+EADD+ TL Sbjct: 62 PGG--PLERGKTFEDYKANRKPMPEDLRPQIKEVMETLEKIGFKVLKMEGHEADDIIGTL 119 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLS-PTLRIRDYFQK----RWLDAPFIDKEFGVQPQQL 165 + I S DK QLL +++ + +D+ ++ +E G+ +Q+ Sbjct: 120 CETYRTIAKEILIFSGDKDLYQLLEKKNIKMLRGKKGVTEFVEIDSAWVKEELGIDVKQI 179 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEM 224 PDY G+ G +S +PGV GIG K A++LL E+++L+GIY+NL+ + + KL KE Sbjct: 180 PDYMGIVGDTSDNIPGVKGIGDKGASKLLQEYKTLDGIYKNLNKIKNPSIQTKLSEQKEN 239 Query: 225 AFLCRDIARLQTDLHIDGNLQQLR 248 A+L + +A ++ DL + + + Sbjct: 240 AYLSKQLATIRRDLKLGITEKDIE 263 >UniRef50_B7FRK5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FRK5_PHATR Length = 389 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 23/260 (8%) Query: 2 AVHLLIVDALNLIRRIHA---------VQGSPCVETCQHALDQLI-----MHSQPTHAVA 47 + L++VDA I R + + V + +LI +P V Sbjct: 58 SDPLILVDASAYIFRAYYSMPPIHRSDGMPTGAVMGFCSMIMRLILNRIVEGERP-RLVL 116 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 VFD + ++ +RH P+YK RP P +L + +R A + G+P + EADD+ Sbjct: 117 VFDAKGKT--FRHSLYPEYKGNRPDAPVDLVPQFALVREAAKAYGIPQIEAATFEADDVI 174 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPT-----LRIRDYFQKRWLDAPFIDKEFGVQP 162 ATLA + G I+S DK QL++ + + D + + +++G P Sbjct: 175 ATLATMAIEEGIDTNILSGDKDLWQLITDREEIPSVHMIDPMTMGRITYDEVVEKWGCGP 234 Query: 163 QQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETH 221 + L D LAG S+ VPGV GIGPK A L+ EF SLE + N+D V ++ R+KL+ + Sbjct: 235 RLLGDILALAGDSADNVPGVPGIGPKIAALLIEEFGSLEKLLANVDTVKQRARREKLKAN 294 Query: 222 KEMAFLCRDIARLQTDLHID 241 ++ A L R + L+ D+ +D Sbjct: 295 EQQARLSRVLVDLRRDVPMD 314 >UniRef50_Q2SRK9 DNA polymerase I n=4 Tax=Mollicutes RepID=Q2SRK9_MYCCT Length = 911 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 78/273 (28%), Positives = 130/273 (47%), Gaps = 28/273 (10%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------------SPCVETCQHALDQLIMHSQP-TH 44 M +L+VD +LI R + V + + L +I P H Sbjct: 1 MKTKILVVDGNSLIFRAFYATAYSPNTSLLKTKSGVLTNAVYSFINMLLSVIHQRGPYDH 60 Query: 45 AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEAD 104 + FD ++ +RH L DYKA R P EL ++ +R + + + EAD Sbjct: 61 ILIAFDKGKKT--FRHDLLSDYKANRIKTPNELVEQFSIVREFLTKANIQWFEQENIEAD 118 Query: 105 DLAATLAVKVTQA--GHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEF 158 D+A ++ + QA I+S+DK QL++ + + Q +D + +++ Sbjct: 119 DIAGSICKYAEKQFDNLQAEILSSDKDMYQLITNKVICLNPVQGVNELEEVDTNKLFEKW 178 Query: 159 GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL 218 + P Q+PDY + G SS + GV GIG K A +L+ ++Q+LE IY NL+ + + KL Sbjct: 179 QILPNQVPDYKAIVGDSSDNLKGVNGIGQKGAIKLIQQYQNLENIYNNLEQIKGAIKTKL 238 Query: 219 ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLVR 251 E K+MAFLC+D+A ++TD+ L+ + Sbjct: 239 EQDKKMAFLCKDLATIKTDV----TLENFSFKK 267 >UniRef50_A6DML3 DNA-directed DNA polymerase, DNA polimerase I protein n=3 Tax=Bacteria RepID=A6DML3_9BACT Length = 1036 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 16/261 (6%) Query: 1 MAVH--LLIVDALNLIRRIHAVQ----------GSPCVETCQHALDQLIMHSQPTHAVAV 48 M+ + ++D++ I R + + ++ + +I P+H VAV Sbjct: 1 MSDQSSIFVIDSMAYIFRAFYGIRANMHSKDGLPTNALFGFINSFENIIRDFNPSHVVAV 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD S +R++ +YKA R PEEL + ++ RG+P G EADD+ A Sbjct: 61 FDAG--SETFRNEMYSEYKANRKECPEELKPQFDLVKEYIALRGIPLLIQKGFEADDIIA 118 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRI-RDYFQKRWLDAPFIDKEFGVQPQQLPD 167 T+A + T + + I S DK QL++ I + +DA + + GV+P Q+ D Sbjct: 119 TVAKQATGSHIKTVICSGDKDLMQLVNDDTLICHTHKNNLMIDAEKVVEIMGVRPDQIVD 178 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWR-KKLETHKEMAF 226 Y + G S+ +PG+ GIGPK A +LL EF +LE I + D + K + + + ++A Sbjct: 179 YLSICGDSADNIPGLPGIGPKGAAKLLAEFDNLETILASHDKIKGKKQSETIREKADLAT 238 Query: 227 LCRDIARLQTDLHIDGNLQQL 247 L + + LQ ++ +D + ++L Sbjct: 239 LSKSLVILQDEMTLDKSYEEL 259 >UniRef50_B6WQX5 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQX5_9DELT Length = 919 Score = 260 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 14/260 (5%) Query: 2 AVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 A + ++D I R + + L +++ +P + V D Sbjct: 11 AEPVFLMDGSAFIYRGFFANRNMQRSDGFPTNSLVVVSRVLLRILREERPRYFAFVQD-- 68 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH+ P YKA R PE+L ++ ++ G+ + G EADD A+LA Sbjct: 69 GKGPNFRHEIFPLYKANRDATPEDLVRQLDPIQRMVRALGLRLEVSQGCEADDCIASLAA 128 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDY--FQKRWLDAPFIDKEFGVQPQQLPDYWG 170 + H IVS DK Q L P + + D +++ + E GV P Q PD Sbjct: 129 RFAGE-HPVIIVSGDKDLKQCLGPNVYMWDPASKEEKLVSEADFTAESGVTPGQWPDVQA 187 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G +S +PGV GIGPK+A Q+ SLE I ++ + K + KL+ H E F+ R Sbjct: 188 LIGDTSDNIPGVPGIGPKTARQIFSICPSLEDIRDHFVLLPPKLQAKLQEHLENMFIWRQ 247 Query: 231 IARLQTDLHIDGNLQQLRLV 250 + L + L LR+ Sbjct: 248 LTTLSREACPGVTLDDLRVR 267 >UniRef50_B2IJU1 DNA polymerase I n=25 Tax=cellular organisms RepID=B2IJU1_BEII9 Length = 1043 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 118/278 (42%), Gaps = 33/278 (11%) Query: 3 VHLLIVDALNLIRRIHAVQ--------------GSPCVETCQHALDQLIMH----SQPTH 44 + +VD + + R + + V L Q I +PTH Sbjct: 33 DRVFLVDGSSFVFRAYFQSIRQDAKYNYRSDRLPTGAVRLFCTKLFQFIREGAADLKPTH 92 Query: 45 AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEAD 104 +FD + +R + P YK+ R PE+L + P +RA+ G+ EAD Sbjct: 93 LAIIFDKS--ENSFRKEIYPPYKSNRSEPPEDLIPQFPLMRASVRAFGLQPVEQDRYEAD 150 Query: 105 DLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDY----------FQKRWLDAPFI 154 DL AT A + G + I+S DK QL+ P + + D Q+R + + Sbjct: 151 DLIATYATQAHALGAEVLIISADKDLMQLIGPGVSMYDPASGEAGAKGARQERRIGQEEV 210 Query: 155 DKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKW 214 FGV P ++ D LAG S+ VPG GIG K+A QL+ ++ L+ + + + + Sbjct: 211 VAYFGVGPDKVIDVQALAGDSTDNVPGARGIGIKTAAQLINDYGDLDNLLKLAREIKQPK 270 Query: 215 RKKLETHKEM---AFLCRDIARLQTDLHIDGNLQQLRL 249 R+++ T E + R + L D+ ++ L L L Sbjct: 271 RREILTEPESVGLIEISRKLVTLVRDVPVEIPLADLGL 308 >UniRef50_Q1II21 DNA polymerase I n=2 Tax=Acidobacteria RepID=Q1II21_ACIBL Length = 929 Score = 259 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 64/277 (23%), Positives = 119/277 (42%), Gaps = 32/277 (11%) Query: 4 HLLIVDALNLIRRIHAV------------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 + ++D + R + + + L++L P H A+ + Sbjct: 34 RVFLIDTFGFVFRAYHAMARQRPMSTKTGIPTSATYVFVNMLNKLRQDFAPEHIAAIMEG 93 Query: 52 EN------------------RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGV 93 ++ ++ YKA R MPE+L +MP + A + Sbjct: 94 GKTFRDEEAAAVATINKFDIKTQTFQEIAYGGYKANRTEMPEDLTQQMPYIERALNAYRI 153 Query: 94 PCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL-DAP 152 P S G EADD+ TLA K G+ IVS+DK QL++ + I + + + D Sbjct: 154 PMISAEGFEADDVIGTLAKKAADGGYPVYIVSSDKDMMQLVTERVCILNPPKDNLICDPK 213 Query: 153 FIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-A 211 +++ GV P+++ D L G S VPG GIG K + QL+ F ++E ++ V + Sbjct: 214 KVEEILGVPPERVVDVMALRGDSIDNVPGAPGIGDKGSVQLIQRFGTVEAALDHAGEVES 273 Query: 212 EKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR 248 ++ R+ L+ +++ + + ++TD+ + Q +R Sbjct: 274 KRQRESLQQNRDAVLFSKRMVTIRTDIDMPFEPQAMR 310 >UniRef50_P52027 DNA polymerase I n=4 Tax=Deinococci RepID=DPO1_DEIRA Length = 956 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 120/255 (47%), Gaps = 16/255 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L+++D L R + + + L +L + + VFD Sbjct: 46 PDTLVLIDGHALAFRSYFALPPLNNSKGEMTHAIVGFMKLLLRLARQ-KSNQVIVVFDPP 104 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 ++ +RH++ YK+GR PE+L ++ +RA + G P G EADD+ A+L Sbjct: 105 VKT--FRHEQYEGYKSGRAQTPEDLPGQINRIRALVDALGFPRLEEPGYEADDVIASLTR 162 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 G++ IV++D+ QLL +++ + +++++GV +Q DY L Sbjct: 163 MAEGKGYEVRIVTSDRDAYQLLDEHVKVI-ANDFSLIGPAQVEEKYGVTVRQWVDYRALT 221 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK---WRKKLETHKEMAFLCR 229 G +S +PG GIGPK+A +LL E+ +LE +YE A K RKKL +E Sbjct: 222 GDASDNIPGAKGIGPKTAAKLLQEYGTLEKVYEAAHAGTLKPDGTRKKLLDSEENVKFSH 281 Query: 230 DIARLQTDLHIDGNL 244 D++ + TDL +D Sbjct: 282 DLSCMVTDLPLDIEF 296 >UniRef50_D2NTK8 DNA polymerase I n=2 Tax=Rothia mucilaginosa RepID=D2NTK8_9MICC Length = 1003 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 26/272 (9%) Query: 3 VHLLIVDALNLIRRIHAV------------------QGSPCVETCQHALDQLIMHSQPTH 44 LL++D +L R Q + V L +I +QP+H Sbjct: 6 KTLLLIDGHSLALRSFFGIYTMAEKTGQHIFVRSDGQHTEAVHAFLSTLLSIIKDNQPSH 65 Query: 45 AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEAD 104 FD + +R +YK GR +PE + ++ ++ +P + EAD Sbjct: 66 IAVAFDLPGGT--FRTAEYGEYKGGRNAIPEAFNGQIDLIKKMLGALNIPALTYENYEAD 123 Query: 105 DLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK------RWLDAPFIDKEF 158 D+ ATL + T+AG++ I+S D+ QL++ + + + +D ++K+ Sbjct: 124 DIVATLTRRGTEAGYKVLILSGDRDIFQLVTDDVTLLYPVTTGPSKGIQRMDPAAVEKKT 183 Query: 159 GVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL 218 V P PD L G + +PGV G+GP A + L E+ SL+G+ +N D + K + L Sbjct: 184 KVPPHMYPDLAALTGEQADNLPGVPGVGPGFAAKWLGEYGSLQGVLDNRDKIGGKKGEAL 243 Query: 219 ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 + + R + +L DL ++ L+ Sbjct: 244 RENVDNVVRNRRLNQLVNDLDLNVTLEDTAFT 275 >UniRef50_C9RNE9 DNA polymerase I n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNE9_FIBSS Length = 972 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 86/266 (32%), Positives = 130/266 (48%), Gaps = 18/266 (6%) Query: 1 MAVH-LLIVDALNLIRRIHAVQGSP-----------CVETCQHALDQLIMHSQPTHAVAV 48 MA LL++D+ L R+ + A+ +++ +PTH Sbjct: 1 MAEKTLLLLDSFALAFRMFYAYSQNPLVNSKGEDVSMMHGYWGAVLRILAKHKPTHFAIA 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 D + +RH+ PDYKA R PMPEE+ +MP L + E G+P S G EADD+ A Sbjct: 61 RDV-AHTKTFRHELYPDYKANRGPMPEEMAAQMPLLCESMEASGIPLLSEPGYEADDVMA 119 Query: 109 TLAVKVTQAGHQ-ATIVSTDKGYCQLLSPTLRIRDYFQK---RWLDAPFIDKEFGVQPQQ 164 + A AG I+S DK Q+++ + + + + +++G+ P++ Sbjct: 120 SAAEAAVNAGFDHVVIISKDKDMSQIVTDKIHLFHLEKGADGIDFGPQQVLEKYGIPPEK 179 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHKE 223 + DY L G SS VPGV +GPK+A QLL E+ ++ IY NLD + +K L +KE Sbjct: 180 IRDYLALMGDSSDNVPGVPKVGPKTAIQLLTEYGDMDNIYANLDNIKKKGLHDNLANNKE 239 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRL 249 AFL R++ LQT GNL L Sbjct: 240 QAFLSRELVTLQTKRAYHGNLDALEF 265 >UniRef50_D1AZX7 DNA polymerase I n=3 Tax=Campylobacterales RepID=D1AZX7_SULD5 Length = 885 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 13/256 (5%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L I+D R + + + + + + + + D + Sbjct: 2 KTLTIIDTFGFFFRNYYALPQLRNSQGFPTGLLTGFANFIYAIKNEHDTDYVMFALDSKG 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH+ P+YKA RP PEEL ++P + E+ G C+S G EADD+ A+ Sbjct: 62 K--NFRHELDPNYKANRPEAPEELKKQLPVAISWIEKMGFKCYSEEGFEADDVIASAVKF 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSP-TLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 + G + IV+ DK QL+ + I D +K +D+ ++FGV P ++ +Y L Sbjct: 120 AKRHGIKVRIVTHDKDLYQLIDDGRVVIYDPMKKIEIDSEKCFEKFGVYPDKINEYLSLV 179 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKEMAFLCRDI 231 G ++ +PGV GIGPK A +LL +F S+E IY NL+ +A + + LE +E AFL + + Sbjct: 180 GDTADNIPGVKGIGPKGAKKLLDDFGSVENIYANLERIANPRSKSMLEEGRESAFLSKQL 239 Query: 232 ARLQTDLHIDGNLQQL 247 RL L+I + Sbjct: 240 VRLDDSLNIADTFEAF 255 >UniRef50_A5CXW1 DNA polymerase I n=2 Tax=sulfur-oxidizing symbionts RepID=A5CXW1_VESOH Length = 909 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 14/257 (5%) Query: 1 MAVHLLIVDALNLIRRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVF 49 M L+++D + R + + + +A+ L Q + +F Sbjct: 1 MPHKLILMDGSAFLFRAYFSTLKQNLTNQNGFPTGAMFGVINAMKSLQRKYQEARIIIIF 60 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D R +RH P YKA R P+ L ++ L + G+ S EADD+ AT Sbjct: 61 DA--RGKNFRHNIYPQYKANRKPIDGGLVVQIEPLYEMIQAMGIHFICVSKVEADDVIAT 118 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 L+ Q + I S DK QL+ + + + D + ++ GV P+++ D+ Sbjct: 119 LSCCANQNNIKTIIASGDKDLMQLVGTNISQLN-MKGVLHDRQSVIEKIGVAPEKILDFL 177 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G S+ +PGV +GPK+A + L + + GI EN + K +KL + ++ L Sbjct: 178 ALTGDSADNIPGVPSVGPKTAIKWLQIYSDILGIKENAMQIKGKVGEKLRDNFDLLDLSY 237 Query: 230 DIARLQTDLHIDGNLQQ 246 + +L+ D+ + N+ Sbjct: 238 QLVKLKFDVVLPCNILD 254 >UniRef50_Q1LTX9 DNA polymerase I n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=Q1LTX9_BAUCH Length = 306 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 18/262 (6%) Query: 5 LLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 LL+VD + R + + + + + L+ L + +FD Sbjct: 2 LLLVDGSFYLYRAYHAFPLLTNNLGEPTGAIYGVINMLNSLFKQYSTSSIAIIFDAYG-- 59 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 +RH+ DYK R M ++L ++ L + G+P G E+DD+ TLA + Sbjct: 60 QNFRHKIFHDYKLNRTRMSKDLSCQIDPLYKIIQSMGLPLLVVKGVESDDVIGTLAHQAM 119 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 I + DK QL+SP + + + L + K+FGV P+ + DY L G Sbjct: 120 CNNINVLISTGDKDMAQLVSPKIHLFNSTMNMRLGPKEVQKKFGVLPELIIDYIALVGDK 179 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEMAFLC 228 S +PGV GIG K+A LL +F L+ +Y+NL + + KL+ ++E AFL Sbjct: 180 SDNIPGVPGIGKKTAKILLQQFGGLKFLYQNLHKLNHFNLCRNKNLATKLDNYREKAFLS 239 Query: 229 RDIARLQTDLHIDGNLQQLRLV 250 +A ++T++ +D QL + Sbjct: 240 YQLATIRTNVMLDITYDQLIVK 261 >UniRef50_A3EQ00 DNA polymerase I n=3 Tax=Leptospirillum RepID=A3EQ00_9BACT Length = 872 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 18/264 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L+++D I R + + + + + L ++ P+ VF E Sbjct: 23 PSTLVLMDGFGYIFRAYHSRVTFVTRAGLPTDAITVFGNMLLSVLKELSPSAMAVVF--E 80 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +R+ R + LP+ KA RP P + ++P + GVP ST G EADD A LA+ Sbjct: 81 SRTGNVRSEILPEIKANRPEPPSDFLQQIPYIERLIRGIGVPLLSTDGYEADDTIAALAL 140 Query: 113 KVTQAGHQ------ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLP 166 K + ++S+DK L+S + + D K+ L + +++GV+P Q+P Sbjct: 141 KWLNHHDRTNVPCHVVVLSSDKDLLTLVSERVWVYDPMTKKVLGPSDVREKWGVEPWQIP 200 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDA-VAEKWRKKLETHKEMA 225 D L G ++ +PGV GIG K+A +LL +++ +YE+LD V E+ R L H+E Sbjct: 201 DLLALTGDTADNIPGVPGIGQKTAAKLLGNQGTIDTLYEDLDNVVPERIRALLREHRERV 260 Query: 226 FLCRDIARLQTDLHIDGNLQQLRL 249 F + + L +DL + + L L Sbjct: 261 FRNKKVTVLHSDLALSLEPESLSL 284 >UniRef50_Q30R59 DNA polymerase A n=6 Tax=Epsilonproteobacteria RepID=Q30R59_SULDN Length = 902 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 14/261 (5%) Query: 1 MAVHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 M+ + I+D R + + + + L + V D Sbjct: 1 MSKTVTIIDTFGFFFRSFYALPQHLKNSQGFPTGLLTGFTNFISTLQKQHDSDYIVFAID 60 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +R + P+YKA R P P+EL ++P ++ G G EADD+ AT+ Sbjct: 61 --TKGDSFRKEIDPNYKANRQPPPQELSMQLPIAIEWIDKMGYKTLGFDGYEADDVIATV 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSP-TLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 + + +VS DK QL+ + + D +K+ +D K++G+ P+Q DY Sbjct: 119 VRFAKEKSYNVRVVSHDKDLFQLIDDGRVVLVDAIKKQVMDEDECFKKYGISPKQFIDYQ 178 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLC 228 + G S+ +PGV GIG A +LL+E+++L+ IY N++ + +KKL KE A++ Sbjct: 179 SILGDSADNIPGVKGIGKVGAEKLLIEYETLDNIYANIENIKPLGIQKKLLEFKEQAYMS 238 Query: 229 RDIARLQTDLHIDGNLQQLRL 249 + + L + + ++ ++ Sbjct: 239 KKLVTLSCSVFESFDFEEFKM 259 >UniRef50_C6C0R6 DNA polymerase I n=3 Tax=Desulfovibrio RepID=C6C0R6_DESAD Length = 904 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 14/259 (5%) Query: 3 VHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L ++D R + + L ++I +P + V + D + Sbjct: 12 DPLYLIDGSAFFYRGFHAYPDLKRSDGVPTNAMFFVLRTLLKVIKEEKPKYLVFILDGKG 71 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH+ YKA RPPMP++L ++ L+ A GVP + G EADD A+LA + Sbjct: 72 K--NFRHELYDQYKAQRPPMPDDLRSQIEPLKEALNVIGVPLIVSEGEEADDCIASLAAR 129 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDY--FQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 I+ DK Q L + + D +++ ++ ++P+Q D+ L Sbjct: 130 YKSE-RPVVILGADKDLKQCLDENVFMWDPAGKKEKITSLADFREDTKLEPEQWADFQAL 188 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G S+ +PGV G+G +AT+++ E+ +LE I +N D + +KK++ E F+ R++ Sbjct: 189 VGDSADNIPGVPGVGKVTATKIMAEYPTLEDIRDNYDKLKPAIQKKMKDELENIFVYREL 248 Query: 232 ARLQTDLHIDGNLQQLRLV 250 R++ D +L+Q L Sbjct: 249 TRMRLGSCSDCDLKQCELR 267 >UniRef50_B2A646 DNA polymerase I n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A646_NATTJ Length = 930 Score = 256 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 15/262 (5%) Query: 3 VHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 +++D +L+ R + + L +L+ P + VFD + Sbjct: 10 DKFVVIDGNSLLNRAFYALPLLQTKQGFFTNAIYGFTTMLLKLVQDESPNYLAVVFDTKA 69 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +RH + P+YK R P+E+ +MP L+ E + + G EADDL Sbjct: 70 KT--FRHHKFPEYKGHRDKAPDEMRPQMPMLKELLEAMNINYFEKDGYEADDLIGAFTKI 127 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYW 169 Q + +V+ DK QLL I + D + +EFGV +L D Sbjct: 128 AKQEDKETMVVTGDKDLLQLLDDKTTILLTKKGITQMESYDGEKVKEEFGVNVDKLIDLK 187 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCR 229 L G S VPGV G+G K+A +LL + LE +Y++LD V K + KL +K+ AFL + Sbjct: 188 ALTGDKSDNVPGVPGVGKKTALKLLNNYGDLEKLYKSLDGVGGKLQSKLADNKDKAFLSK 247 Query: 230 DIARLQTDLHIDGNLQQLRLVR 251 ++ + + + NL +L + Sbjct: 248 ELVTIDCEESLIENLDWNQLSK 269 >UniRef50_C9Y9S8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9S8_9BURK Length = 430 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 2/225 (0%) Query: 23 SPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMP 82 + V + ++ L + VFD + + +R + P+YKA R PMP++L ++ Sbjct: 50 TGAVRIMINMMNSLRKEYPADYVACVFDAKGPT--FRDEIYPEYKAHRDPMPDDLRSQIA 107 Query: 83 ALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRD 142 + G G EADD+ TLA G + + S DK QL++ + I D Sbjct: 108 PIHEIVRLLGWKVLDVPGVEADDVIGTLAATAASQGIEVIVSSGDKDLAQLVNEHITIID 167 Query: 143 YFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEG 202 + D ++ EFGV + + DY L G + VPGVA +GPK+A + L ++ SL+G Sbjct: 168 TMNGKRRDLAGVEAEFGVPARLMLDYQTLVGDTVDNVPGVAKVGPKTAVKWLQQYGSLQG 227 Query: 203 IYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQL 247 + +N + + L + R + ++TD + G + L Sbjct: 228 VVDNAANIGGVVGENLRKALDWLPTGRTLLTIKTDCDLTGWVDGL 272 >UniRef50_A5TW64 DNA-directed DNA polymerase I n=10 Tax=Fusobacterium RepID=A5TW64_FUSNP Length = 914 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 22/268 (8%) Query: 3 VHLLIVDALNLIRRIHAV--------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 +++D ++ R + + + V + L +I +P + A FD + R Sbjct: 2 KKAVLLDVSAIMYRAYFANMNFRTKNEPTGAVYGFINTLLSIINEFKPDYMAAAFDVK-R 60 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 SS R + DYK+ R PE+L ++P + + + + G EADD+ +LA K+ Sbjct: 61 SSLKRTEIYSDYKSNRQSAPEDLITQIPRIEEVLDAFNINRYKIEGYEADDVLGSLAKKL 120 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQ-------KRWLDAPFIDKEFGVQPQQLPD 167 + + IV+ DK QL+ + + + ++ + GV P+++PD Sbjct: 121 AKQDIEVIIVTGDKDLSQLVEKNITVALLGKGAEGEKFGTLKNSDDVVNYLGVVPEKIPD 180 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA------EKWRKKLETH 221 +GL G S +PGV IG K A + ++ SLE IYEN+D + K L Sbjct: 181 LFGLIGDKSDGIPGVTKIGEKKALAIFSQYDSLEKIYENIDNLKSIDGIGPSLIKNLINE 240 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLRL 249 K++AF+ R++A++ T+L ID L+ Sbjct: 241 KDIAFMSRELAKIFTNLDIDVEESGLQY 268 >UniRef50_Q2NK60 DNA polymerase I n=5 Tax=Candidatus Phytoplasma RepID=Q2NK60_AYWBP Length = 847 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 118/259 (45%), Gaps = 21/259 (8%) Query: 3 VHLLIVDALNLIRRIHAVQG--------------SPCVETCQHALDQLIMHSQPTHAVAV 48 HL++VD +L+ R + + + + ++++ ++ + + Sbjct: 2 KHLVLVDGNSLLFRAYHATASKYKPLLQNKKGIYTNALLSFIRMFEKILEETK-GYILVA 60 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + RHQ YK GRP P L ++P ++ E GV + EADD+ Sbjct: 61 FDTPKTT--KRHQLYDAYKQGRPETPSALISQIPLIKQYLELIGVKYHAQDEYEADDIIG 118 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQ 164 TLA + + + +I S+D QL+ + + + ++ + +E+G++ Q Sbjct: 119 TLAKEASNQNNTVSIYSSDCDLLQLVDKKITVCLLKKGLREIKYYTPTTLLEEYGLKEYQ 178 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + DY L G S + GV GIGPK+A +LL E+ +L+ + +NLD + + K++ + Sbjct: 179 MIDYKSLIGDPSDNIKGVLGIGPKTAQKLLQEYDTLDNLMQNLDNIKPILKTKIQNSQTD 238 Query: 225 AFLCRDIARLQTDLHIDGN 243 L + + + + + + Sbjct: 239 LELSKILTAINLKVPLPFD 257 >UniRef50_B3PMZ8 5'-3' exonuclease, exo domain of DNA polymerase I n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PMZ8_MYCA5 Length = 293 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 20/257 (7%) Query: 1 MAVHLLIVDALNLIRRIHAVQG-------------SPCVETCQHALDQLIMHSQPTHAVA 47 M +L++D L R + + V + L LI + TH Sbjct: 1 MKNKILVIDGTYLAYRSYFATTYKGVVMANQEGTLTNAVFGFFNTLLTLIKMQKVTHVFV 60 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 FD + ++ +RH+ YKA R P + + ++ ++ + + + G EADD+ Sbjct: 61 AFDSKIKT--FRHELFSGYKATRQKAPSDFYVQLNFIQQLLDALNITNFYKDGFEADDII 118 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL---DAPFIDKEFGVQPQQ 164 A + ++ + I S D+ QL++P + I K +A + + P Q Sbjct: 119 AKVVSIFSE--DEILIHSADQDLNQLINPNVAIIKKNNKGVYFELNANNFGEYYDFLPSQ 176 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + DY L G SS GV GIGPKSA LL E+ +LE I+ N++++ + K+E +KE Sbjct: 177 VIDYKALVGDSSDNFKGVPGIGPKSAAGLLHEYGTLENIFANIESIKPALKAKIEANKEE 236 Query: 225 AFLCRDIARLQTDLHID 241 A + +A L+TD I Sbjct: 237 ALRDKYLATLRTDFEIP 253 >UniRef50_B0SCM1 DNA-directed DNA polymerase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCM1_LEPBA Length = 942 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 120/267 (44%), Gaps = 21/267 (7%) Query: 1 MAVHLLIVDAL-------------NLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVA 47 M+ LLI+D NL S + L +L+ TH Sbjct: 1 MSGRLLIIDGHALAFRAYFAFAASNLTN-SKTGLPSGAIFGFWRMLFKLLQDEHVTHIAF 59 Query: 48 VFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLA 107 FD R R+ +YKA R PMPE+L ++ + + P + +G EADD+ Sbjct: 60 TFDPGTR--LERNDLYEEYKAHRKPMPEDLKPQIQKIYEMLQALEFPMYKINGIEADDII 117 Query: 108 ATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQ 163 +L K + + I+S+DK Q+L + + + +D ++ G+ + Sbjct: 118 GSLCKKFGKDFEEIVILSSDKDLYQVLDKNIHMLRGKRGVSEFEKIDPKWVKTNIGITKE 177 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEK-WRKKLETHK 222 Q+ DY L G +S +PGV GIG K A +L+ EF LE IY+ +D V K KL K Sbjct: 178 QVTDYMALLGDASDNIPGVKGIGEKGAAKLIQEFGDLETIYKKIDKVKNKSLIDKLIADK 237 Query: 223 EMAFLCRDIARLQTDLHIDGNLQQLRL 249 E AFL R +A + T+L +D L+L Sbjct: 238 ENAFLSRKLATIVTNLKLDIKKSDLKL 264 >UniRef50_Q72ES3 DNA polymerase I n=3 Tax=Desulfovibrio vulgaris RepID=Q72ES3_DESVH Length = 1015 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 69/259 (26%), Positives = 112/259 (43%), Gaps = 14/259 (5%) Query: 3 VHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L ++D I R + + L +L+ +P H V D + Sbjct: 12 EPLWLMDGSAFIFRGFYAFQNMQRSDGFPTNALFIVTRILLRLLREEKPRHFAFVLDGKG 71 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + +RH P YKA R PE L ++ +R G+P + G EADD A+LA + Sbjct: 72 PT--FRHDLFPLYKAQRAATPEPLVQQLEPIRRMVTALGLPLEVSDGCEADDCIASLAAR 129 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDY--FQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 I+ DK Q L P + + D +++ E G+ P Q PD + Sbjct: 130 YRDE-RPVVIIGADKDLKQCLHPNVVLWDPGAKEEKLTTLASFTAETGLTPAQWPDVQAV 188 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G +S +PG+ G+GPK+A+++ +F +LE I + D + +KK E H + FL R + Sbjct: 189 IGDTSDNIPGIPGVGPKTASKIFADFPTLEDIRDGFDRLPPNLQKKFEQHLDAMFLYRQL 248 Query: 232 ARLQTDLHIDGNLQQLRLV 250 L D D ++L + Sbjct: 249 TTLAIDRCADLTPERLSVQ 267 >UniRef50_A7ILD7 5'-3' exonuclease n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7ILD7_XANP2 Length = 299 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 18/261 (6%) Query: 3 VHLLIVDALNLIRRIHAV--------QGSP--CVETCQHALDQLIMHSQP----THAVAV 48 H+L++D + + R G P + + L+ + +H + Sbjct: 10 DHVLLIDGSSFLWRAFYGAPAVIRRSDGHPVGAISGFCWMMWTLLHETSAVPPASHRAVI 69 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD R WRH L YKA R P+++ + +RAA +P +G EADDL A Sbjct: 70 FDAGRR--NWRHDILASYKANRNEPPDDIKRQFKPVRAACAALPIPSVELAGYEADDLIA 127 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPT--LRIRDYFQKRWLDAPFIDKEFGVQPQQLP 166 T K +G TI + DK QL+ + + D + R + + + FGV P + Sbjct: 128 TYTRKAVASGAGVTIATGDKDLAQLVDDRTGVCLYDASKGRTMREAEVLERFGVPPAGVL 187 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D LAG ++ +PGV GIG K A +L+ SLE I A EK K+ H A Sbjct: 188 DLLALAGDTTDNIPGVPGIGAKRAAELVSRHGSLEDIIAAGTARKEKQAAKVADHAASAR 247 Query: 227 LCRDIARLQTDLHIDGNLQQL 247 + R +A L T + + L L Sbjct: 248 ISRSLATLDTAVPVPLALAHL 268 >UniRef50_C3WHF0 DNA polymerase I n=3 Tax=Fusobacterium RepID=C3WHF0_9FUSO Length = 916 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 22/268 (8%) Query: 3 VHLLIVDALNLIRRIHAV--------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 +++D ++ R + + + V + L +I P + A FD + R Sbjct: 2 KRAVLLDVSAIMYRAYFANMNFRTKNEPTGAVYGFINTLLSIIKEFNPDYMAAAFDVK-R 60 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 SS R + DYK+ R PE+L ++P + + + + EADD+ ++A K+ Sbjct: 61 SSLKRTEIFGDYKSNRQSTPEDLVAQIPRIEEVLDAFNINRYRIESYEADDVLGSIAKKI 120 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW-------LDAPFIDKEFGVQPQQLPD 167 + + IV+ DK QL+ + I + A + GV P+++PD Sbjct: 121 AKDDLEVIIVTGDKDLSQLVEKNITIALLGKGTEGEKFGMLRTAEDVVNYLGVVPEKIPD 180 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA------EKWRKKLETH 221 +GL G S +PGV IG K A + ++ SLE IYEN+D + K L Sbjct: 181 LFGLIGDKSDGIPGVTKIGEKKALAIFSKYDSLEKIYENIDDLKNIEGIGPSLIKNLTNE 240 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLRL 249 K++AFL R++A++ T+L I+ + L+ Sbjct: 241 KDIAFLSRELAKIFTNLDINLEEENLKY 268 >UniRef50_B8IZN9 DNA polymerase I n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZN9_DESDA Length = 921 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 68/257 (26%), Positives = 109/257 (42%), Gaps = 14/257 (5%) Query: 2 AVHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 + ++D I R + + L +++ +P + + V D + Sbjct: 11 TEPVFLMDGSAFIYRGFFANRNMQRSDGFPTNALVVVTRVLLRILREERPQYFLFVKDGK 70 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH P YKA R PE+L +M + G+ + EADD A+LA Sbjct: 71 GK--NFRHDIFPLYKANRDATPEDLVRQMQPIERMVTALGMNLEVSDHCEADDCIASLAA 128 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDY--FQKRWLDAPFIDKEFGVQPQQLPDYWG 170 + +Q IV DK Q L P + + D ++ L A +E G+ P Q PD Sbjct: 129 RFSQE-RPVVIVGGDKDLKQCLGPNVYMWDPAFRDEKLLTAAQFTEESGLTPAQWPDVQA 187 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRD 230 L G +S +PGV GIGPK+A ++ SLE I ++ + K + KL H + F R Sbjct: 188 LVGDTSDNIPGVPGIGPKTAAKIFEICPSLEDIRDHFALLPPKIQDKLRDHLDEMFTWRK 247 Query: 231 IARLQTDLHIDGNLQQL 247 + L D+ + L Sbjct: 248 LTTLSLDVCTAVEMDDL 264 >UniRef50_P54161 5'-3' exonuclease n=31 Tax=Bacillales RepID=EX53_BACSU Length = 296 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 20/265 (7%) Query: 3 VHLLIVDALNLIRRIHAVQ-------------GSPCVETCQHALDQLIMHSQPTHAVAVF 49 LL+VD + L+ R + V L + QPTH V + Sbjct: 4 NKLLLVDGMALLFRAFFATAVHRNFMINDSGVPTNGVNGFLKHLITAVETFQPTHVVCCW 63 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D +++ +R+ DYKA R P EL + + A + G+ +G EADD T Sbjct: 64 DMGSKT--YRNDLFQDYKANRSAPPVELIPQFDLAKEAAAELGIMNIGFAGYEADDCIGT 121 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQL 165 LA T+V+ D+ QLL+ + + + + +E GV P+ L Sbjct: 122 LADLFANE-ADITVVTGDRDLLQLLTDKVSVALLQKGIGNYKVYTKETFYEETGVMPKAL 180 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 225 D L G SS PGV GIG K+A +L+ E+++++ + ENL + + + K++ Sbjct: 181 IDIKALMGDSSDNYPGVKGIGEKTAYKLIREYETIDRLLENLSLLPKGQQGKIQQGLSDL 240 Query: 226 FLCRDIARLQTDLHIDGNLQQLRLV 250 + R +A + + + L+ Sbjct: 241 EMSRKLAEIHCSVPLACTLKDALFT 265 >UniRef50_C8PHS8 DNA polymerase I n=2 Tax=Campylobacter RepID=C8PHS8_9PROT Length = 938 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 14/259 (5%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + I+D R++ + S V + L + + + D + Sbjct: 2 QTITIIDTFGFFFRLYYAMSGLKTKDGKPSGMVSGFASFIANLSKEFKSDYIIFALDSKG 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R P+YK R P L ++P E+ G+ G EADDL A++ K Sbjct: 62 KT--FRSDIDPNYKTNRQAPPPALLQQLPVCIEMIEKMGLYSLGREGYEADDLIASVVKK 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 H+ IV++DK QL+ ++I + +K + +GV P+Q+ D+ + G Sbjct: 120 YGAT-HKINIVTSDKDLYQLIGENVKIYSHGKKMLYGREECLQRYGVYPEQIVDFLAICG 178 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLCRDIA 232 S+ +PGV GIG K A +LL E+ SL+ IY NLD + + K R+ L K+ A++ + +A Sbjct: 179 DSADNIPGVRGIGDKGAKKLLDEWGSLDEIYSNLDRLPQNKQREYLIEGKQSAYISKRLA 238 Query: 233 RLQTDLHIDGNLQQLRLVR 251 L +L I L+ + + Sbjct: 239 TLYDELEIP-PLEDAKFPQ 256 >UniRef50_Q8K9D0 5'-3' exonuclease n=4 Tax=Buchnera aphidicola RepID=EX53_BUCAP Length = 287 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 68/267 (25%), Positives = 129/267 (48%), Gaps = 19/267 (7%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLI-MHSQPTHAVAVFDD 51 ++IVD + R + S + + ++ + + +FD Sbjct: 6 KKPIIIVDGSLYLYRSYFTFQNFNSNEENPSGAIYGMLKTIQNILNKNYNSKKIIIIFDS 65 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 + +R+ +YK+ R MP +L+ ++ L E+ G+ S G EADD+ +LA Sbjct: 66 SKK--NFRNTIFKEYKSNRSAMPNKLYVQIQPLFKILEEIGIKTLSILGIEADDIIGSLA 123 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 K+ Q G Q IVS DK QL++ + + + + L I +++G+ P++ D L Sbjct: 124 YKLEQKGEQVLIVSHDKDMIQLITDNINVLNISKNSILTPEKIQEKYGIYPKEFIDLLAL 183 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEM 224 G SS +PGV IG K+A LL +F +++ IY N++ + A+ +L+ +K+ Sbjct: 184 MGDSSDNIPGVPKIGIKTALFLLKKFSNIKNIYNNIEKIQSLPFRNAKNAAIQLKNYKKT 243 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRLVR 251 AFL +A+++ D+ I+ +++ L + Sbjct: 244 AFLSYQLAKIKLDVPINITSEEITLKK 270 >UniRef50_C7LZ56 DNA polymerase I n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ56_ACIFD Length = 886 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 77/251 (30%), Positives = 116/251 (46%), Gaps = 18/251 (7%) Query: 15 RRIHAVQ-----------GSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRL 63 R + + L ++ ++PTH D E + +R L Sbjct: 25 FRAFYALREPMMRTESGVATNALFGFASMLANVVAQTRPTHLAVALDAEGPT--FRDAIL 82 Query: 64 PDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATI 123 YK R P P++L ++ A R E GVP SG EADD+ ATLA + AG I Sbjct: 83 ESYKGTRAPTPDDLRQQLDAARGLLEAIGVPAVEASGFEADDVIATLATRARDAGIATRI 142 Query: 124 VSTDKGYCQLL-SPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDYWGLAGISSSK 178 V+ D+ QL+ P + + + D + + +GV P + D L G SS Sbjct: 143 VTGDRDLLQLVEDPLIVVLLTRKGVSNLEAFDEAKVLETYGVPPARYGDLASLRGDSSDN 202 Query: 179 VPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDL 238 +PGV GIGPK+A LL F+S+EGI +LDA++ + R+ LE + R + +L+ D+ Sbjct: 203 LPGVPGIGPKTAAALLDRFESIEGILAHLDALSARQREALEQARSQLLEARLLTQLRRDV 262 Query: 239 HIDGNLQQLRL 249 +L LRL Sbjct: 263 AELPSLDALRL 273 >UniRef50_C3U0N4 DNA polymerase I n=1 Tax=uncultured bacterium RepID=C3U0N4_9BACT Length = 803 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 26/265 (9%) Query: 2 AVHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 L+++D+ ++ R + + + + L ++I +P + A FD Sbjct: 16 KKTLVLLDSHAILHRAYHALPDFASPSGEPTGALYGVVAMLLKIIEDFKPDYIAACFDLP 75 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 + +RH+ YK R + L ++ R F G+P + G EADD+ T+A Sbjct: 76 EPT--YRHEAFAAYKGTRSKTDDALVQQIIRSRDIFAAFGIPIYEHPGFEADDMLGTIAY 133 Query: 113 KVT-QAGHQATIVSTDKGYCQLLSPT-LRIRDYFQK----RWLDAPFIDKEFGVQPQQLP 166 + I S D Q + +++ + D + + FG P+ +P Sbjct: 134 QTRDDKDLTVIIASGDMDTMQCVEKKRVQVYTLKKGIKDTILYDEEAVKERFGFGPKLVP 193 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDA---------VAEKWRKK 217 DY GL G +S +PG+ GIG K+AT L+ +F S++ IY+ L + + Sbjct: 194 DYKGLRGDTSDNIPGIVGIGEKTATDLITQFGSIDDIYKKLKKDEAPFLAAGIKPRIIGL 253 Query: 218 LETHKEMAFLCRDIARLQTDLHIDG 242 L+ +E A + +A ++TD I Sbjct: 254 LKAGEEEAQFSKMLATIRTDAPITF 278 >UniRef50_UPI0001978038 DNA polymerase I n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001978038 Length = 913 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 104/258 (40%), Gaps = 15/258 (5%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L ++D R + + + L L T+ + Sbjct: 2 NTLSVIDTFGFFFRSFYALPPLKNSQGFPTGLLVGFCNLLQSLYKDPSCTYIAFALEGGG 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 R R +YKA R PEEL ++P + G S G EADD+ A++ Sbjct: 62 R--NKRRDIYSEYKANRQAAPEELRLQLPIAIEWIAKMGFLNISIEGYEADDVVASINKV 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 I+S DK QL+ I D K+ + +++GV P+ DY L G Sbjct: 120 ANAQNITVRIISHDKDLYQLIDENTYIYDPIGKKDIKEAQCLQKYGVYPKNFIDYQSLVG 179 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV----AEKWRKKLETHKEMAFLCR 229 SS V GV GIG KSA +L+ F S+E +Y +D V + K ++ K+ AFL + Sbjct: 180 DSSDNVMGVKGIGAKSAQKLIQRFGSIESLYARIDEVESATTPRIAKLIKEGKDNAFLSK 239 Query: 230 DIARLQTDLHIDGNLQQL 247 + L +L + +L + Sbjct: 240 KLVTLYDNLLENIDLNKC 257 >UniRef50_C3XEZ4 DNA polymerase I n=3 Tax=Bacteria RepID=C3XEZ4_9HELI Length = 1102 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 74/252 (29%), Positives = 120/252 (47%), Gaps = 19/252 (7%) Query: 4 HLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENR 54 +++VD R + + + + L + + + F E Sbjct: 7 KVILVDTFGFFFRSYYALPPLHNSKHFPTSLLTGFATLIFNLYKEHKDSCII--FTLEGG 64 Query: 55 SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKV 114 + R + P YKA R P++L ++P E+ G+P S G EADD ATLA Sbjct: 65 GTNRRKEFYPQYKANRKESPQDLLAQLPVAIEWLEKMGLPTLSLQGYEADDCIATLATLA 124 Query: 115 TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGI 174 + G++ I+S DK QL+S + I DY +K+ + ++FGV P Y + G Sbjct: 125 KKDGYETQIISHDKDLYQLISEGIYIFDYAKKQAITQKECYEKFGVLPNDFIMYQSIVGD 184 Query: 175 SSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDA--------VAEKWRKKLETHKEMAF 226 SS VPG+ GIGPK A +L F+SLE +YE+++ + ++ ++ HKE AF Sbjct: 185 SSDNVPGIKGIGPKGAQSILAHFKSLESLYESIEKDYENIVSLLGKRTAGLIKEHKEQAF 244 Query: 227 LCRDIARLQTDL 238 + R++ L+TDL Sbjct: 245 ISRNLVTLRTDL 256 >UniRef50_C7N982 DNA polymerase I n=6 Tax=Leptotrichia RepID=C7N982_LEPBD Length = 1046 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 20/266 (7%) Query: 3 VHLLIVDALNLIRRIHAVQ---------GSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 +I+D ++ R H + + L+ +I +P + VA D + Sbjct: 2 KRAVILDTSAIMYRSHFALMGMRNSSGMSTGATFGFINTLESVIREFRPDYLVACLDVK- 60 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 R R L YKA R MPEEL ++ + + +P + +G EADD+ AT A K Sbjct: 61 RDELERTGELETYKAHRESMPEELVMQIDTIMKVLDGYRIPKYKKAGQEADDVIATFATK 120 Query: 114 V---TQAGHQATIVSTDKGYCQLLSPTLRIRDYFQ-------KRWLDAPFIDKEFGVQPQ 163 + +++ DK QL+ + I + K + + GV P Sbjct: 121 FSNDADEQIEVFVITGDKDLTQLVDGKINIALLGKGDKNSAFKHIKTDEDVVEYLGVTPD 180 Query: 164 QLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKE 223 ++PD +GL G S +PGVAGIGPK+ +L+ + +LEGIYEN+D + K ++KL T KE Sbjct: 181 KIPDLFGLMGDKSDGIPGVAGIGPKNGVKLITTYGNLEGIYENIDEIKGKQKEKLLTDKE 240 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRL 249 AF+ R++A ++ +L ++ + +L+ Sbjct: 241 NAFISRELATVKRELDVEYDKNKLKF 266 >UniRef50_Q4UR88 Exodeoxyribonuclease IX n=14 Tax=Bacteria RepID=Q4UR88_XANC8 Length = 332 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 100/259 (38%), Gaps = 18/259 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQG----------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 V L +VDA + R + V L L+ +P H FD Sbjct: 22 PVPLYLVDASLYVFRAWHSIPDEFQDAQGWPTNAVHGFARFLLDLLERERPQHITIAFD- 80 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 E S +RH P YK R P P+ L + +A G+ + EADDL + Sbjct: 81 EALDSCFRHAIYPAYKGNREPAPDALRRQFAHCKALCAALGLSVLAHREYEADDLIGSAL 140 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 G + IVS DK QLL DY + + GV Q+ DY L Sbjct: 141 HSARARGLRGIIVSADKDLSQLLFEHDEQWDYARNVRWGMDGVKARHGVHAHQMADYLAL 200 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-------EKWRKKLETHKEM 224 G + +PG+ GIG KSA LL F SL+ + E LD + + +L +E Sbjct: 201 CGDAIDNIPGITGIGAKSAAVLLAHFGSLDALLERLDELPFLRLRGAAQMALRLREQREH 260 Query: 225 AFLCRDIARLQTDLHIDGN 243 A L R + + D ++ Sbjct: 261 ALLWRQLTTIALDAPLELT 279 >UniRef50_B5FAT7 Uncharacterized exonuclease xni n=138 Tax=Gammaproteobacteria RepID=XNI_VIBFM Length = 262 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 129/256 (50%), Positives = 180/256 (70%), Gaps = 6/256 (2%) Query: 1 MAVHLLIVDALNLIRRIHAVQGSP-----CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 MA+HL+I+DALNLIRR+H+ Q + + T +++++ ++PTH +AVFD + Sbjct: 1 MAIHLVIIDALNLIRRVHSAQPNQDDIQAVITTTTRTINKILKETEPTHIIAVFDHHLQD 60 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 GWR + LP YK R PMPE L M ++ A+ + G+ + G+EADDL ATLA KV Sbjct: 61 RGWRAEILPQYKEDRKPMPEALQKGMDDIQEAWWKLGIDSLLSDGDEADDLVATLANKVA 120 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 Q TI+STDKGYCQLLSPTLRIRDYFQ RWLDAPF++KEFG++P+QL DYWGLAGIS Sbjct: 121 VHNEQVTIISTDKGYCQLLSPTLRIRDYFQHRWLDAPFVEKEFGLKPEQLADYWGLAGIS 180 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQ 235 SSK+ G+ G+GPK+A ++L +F ++E E+ + + +K+RKK + H E A LCR +A L+ Sbjct: 181 SSKITGIPGVGPKAALEILTQFPTIEAANES-EDLPKKYRKKFDEHYETAILCRQVAGLR 239 Query: 236 TDLHIDGNLQQLRLVR 251 TD+ + NLQ +R + Sbjct: 240 TDIELGFNLQDIRYEK 255 >UniRef50_Q7VRJ4 DNA polymerase I n=3 Tax=Enterobacteriaceae RepID=Q7VRJ4_BLOFL Length = 943 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 20/263 (7%) Query: 3 VHLLIVDALNLIRRIHAVQ-------GSPC--VETCQHALDQLIMHSQPTHAVAVFDDEN 53 +++VD + R + G P + + LI QP+H +FD Sbjct: 9 NPIILVDGSFYMYRAYHAYPPLTTQNGQPVWVIYGVISMIKSLITRYQPSHMAVIFDVSG 68 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R YK+ R +P++L ++ + G+ + EADD+ ATLA Sbjct: 69 KT--FRDDLFKQYKSNRIKIPDDLSIQIIPTHKIIKAMGISVLNIPNVEADDVIATLATF 126 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 Q I + DK Q++S + + + L+ ++K+FGV P + DY L G Sbjct: 127 YAQLNKTVLISTGDKDMAQIVSSNIILINTMSNIMLNPTEVEKKFGVPPTLIADYLALVG 186 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-------AEKWRKKLETHKEMAF 226 + +PGV GIG K+A +L + +L +Y+NL+ + +K + L +KE+AF Sbjct: 187 DRADNIPGVPGIGKKTAQIVLNQIGNLNILYQNLNNILQLNIRGRKKIYQALLINKELAF 246 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 LC +A ++ D+ + + +L Sbjct: 247 LCYKLATIKIDVPLQES--DYKL 267 >UniRef50_UPI00016C3887 DNA polymerase I n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3887 Length = 824 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 22/267 (8%) Query: 1 MAVHL-----LIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAV 46 M+ + ++DA LI ++ + + V AL L + + Sbjct: 1 MSDPVSAGSMYLLDAHGLIFQMFYGVGPMSAPDGRPTNAVFGVTRALMNLYDR-GADYLI 59 Query: 47 AVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDL 106 A D E + +R + YKA R P P +L + P ++ E VP G EADD+ Sbjct: 60 ATLDHEKPT--FRVEIDAAYKAHRDPPPPDLLLQEPMIQQVMEAMRVPFLIAPGYEADDV 117 Query: 107 AATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK-RWLDAPFIDKEFGVQPQQL 165 AT++ + G + ++DK QL++ +++ + + LDA + ++GV+P Q+ Sbjct: 118 MATVSTQAAARGLDVFLCTSDKDCRQLITDKVKMLNLRKDYEALDAAGVLADWGVRPDQV 177 Query: 166 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE--KWRKKLETHKE 223 D+ L G S V GVAG+GPK+A + L +F +L+ + N D A K R+ L+ Sbjct: 178 VDFQALVGDSVDGVKGVAGVGPKTAAKWLQQFGTLDVLIANADQAAGGPKTRQALKDAVA 237 Query: 224 MAFL--CRDIARLQTDLHIDGNLQQLR 248 L + + L D+ + + + R Sbjct: 238 SGALAKSKRLVCLDRDVPVAFDWEGWR 264 >UniRef50_B3DZC7 5'-3' exonuclease n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZC7_METI4 Length = 296 Score = 246 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 13/259 (5%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + L++VD R + + + L +L+ +P VFD Sbjct: 1 MRLVLVDGNYYAFRSFYAMPSLATRSGEPTNALYGLTMVLRRLLSDLKPELGAVVFDGGL 60 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 + R DYKA RP +P L ++P ++ + G+ G EADD+ A+ K Sbjct: 61 PAE--RLALRADYKANRPEIPSALKSQLPWIKKLVKALGLCPIEVEGQEADDVIASYTKK 118 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW--LDAPFIDKEFGVQPQQLPDYWGL 171 + G + ++DK L+ +R+ +KR+ L I++++ V+P Q+PD L Sbjct: 119 AVEKGIDVVLATSDKDLMSLVGEHVRVYTVEKKRFKLLGQREIEEKWSVKPSQIPDVLAL 178 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDI 231 G S +PGV GIG K+AT+ ++++ SL + + D ++ K LE +KE + + Sbjct: 179 IGDSVDNIPGVEGIGKKTATKWIIQYGSLFSLLQARDIPDRRFAKLLEENKERIMINWKM 238 Query: 232 ARLQTDLHIDGNLQQLRLV 250 L+ ++ + +++LR+V Sbjct: 239 LELKDNIELPLPIEELRIV 257 >UniRef50_B5RMA2 DNA polymerase I n=2 Tax=Borrelia RepID=B5RMA2_BORDL Length = 922 Score = 246 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 80/262 (30%), Positives = 128/262 (48%), Gaps = 17/262 (6%) Query: 1 MAVHLLIVDALNLIRRIHAVQGSP-----------CVETCQHALDQLIMHSQPTHAVAVF 49 M + ++DALN+I R + V + L +I +P + + F Sbjct: 1 MKE-IYLIDALNIIFRNYHVMKNNPLTNSKGENVSAFIGFFKTLFFIIKEKKPENLIVTF 59 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D E + +R ++ P YKA R P+ L ++ ++ + +P + G EADDL A+ Sbjct: 60 DSE--TQTFRQKQYPSYKATRDAPPDNLIPQIHWIKEGLIKANIPMFELQGYEADDLIAS 117 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW--LDAPFIDKEFGVQPQQLPD 167 K Q + I+S DK QL+S +I + ++ ++ K+FG+ Q+ D Sbjct: 118 FTKKAEQNNYLTYIISPDKDLLQLISNQTKIFKIENSSFLEMNNDYVIKKFGINKSQIKD 177 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 Y + G S +PG+ GIG K A++LL EF +L GIYENL + K+R+ L KE AFL Sbjct: 178 YLSIVGDPSDNIPGIKGIGQKGASKLLNEFHTLNGIYENLSLINNKYREILLREKENAFL 237 Query: 228 CRDIARLQTDLHIDGNLQQLRL 249 + L DL + +L+ RL Sbjct: 238 SYKLISLVEDLELP-SLETFRL 258 >UniRef50_C5BR48 5'-3' exonuclease n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BR48_TERTT Length = 301 Score = 246 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 22/268 (8%) Query: 2 AVHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIMHSQPTHAVAVFDD 51 + + ++DA I R + Q + V L + + +P + FD Sbjct: 6 SDTVYLIDASIYIFRYYFSLPDNWWGREHQPTAAVYGYGRWLLRFLKAVRPKYIACCFD- 64 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 E+ +S +R++ P YKA R E L ++ A + G+ +++ EADDL ATLA Sbjct: 65 ESLTSCFRNELYPGYKASRALPDESLAFQLAACKGLSAAYGLATYASPRFEADDLIATLA 124 Query: 112 VKVTQAGHQATIVSTDKGYCQLL-SPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 K + G +VS DK Q++ + + D+ + LD+ I ++G+ P+Q+ D+ Sbjct: 125 AKSRKRGLSVCVVSRDKDLSQIIRTARDTLWDFPDREPLDSDAIFAKYGIYPEQMADFLA 184 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-------KWRKKLETHKE 223 L G S +PGVAGIG K+A LL EF S I N + VA+ K KL + Sbjct: 185 LVGDPSDDIPGVAGIGGKTAAALLAEFGSWREIRRNYNRVAKCAIRGAAKLGDKLAAAEA 244 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRLVR 251 L R +AR+ +D + + R+ R Sbjct: 245 QIELSRQLARVASDAPLG---ARFRVTR 269 >UniRef50_UPI0000DAED41 hypothetical protein Wendoof_01000149 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAED41 Length = 529 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 125/262 (47%), Gaps = 16/262 (6%) Query: 1 MAVHLL-IVDALNLIRRIHAV-------QGSP--CVETCQHALDQLIMHSQPTHAVAVFD 50 M I+D + R + V G P V + + + I HS + D Sbjct: 1 MKEKTFTIIDGYGFLFRAYYVLPHLITTTGMPIGGVYGFLNMVLKYIAHS--DYLTIALD 58 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +RH P+YKA R PE+L + LR A E + G EADD+ ATL Sbjct: 59 AGKK--NFRHNLYPEYKANRVTPPEDLTPQFTILREAVEAFNLSYEEIEGYEADDIIATL 116 Query: 111 AVK-VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYW 169 A K + +VS+DK QLL+ + I D + ++D + ++FGV +L D + Sbjct: 117 AAKYANHQDFKVVVVSSDKDLFQLLNHNILIFDPIKNIYIDEKQVIEKFGVNSHKLLDLF 176 Query: 170 GLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKEMAFLC 228 L G +S +PGV GIGPK+A +LL EF SL I EN+D + + + R L HKE A + Sbjct: 177 SLTGDASDNIPGVPGIGPKTAAKLLDEFDSLNNIIENIDNIEQTRIRNILAEHKEKALIS 236 Query: 229 RDIARLQTDLHIDGNLQQLRLV 250 R++ L + + ++ + + Sbjct: 237 RELLSLCEKVDLQHDIAKCEVR 258 >UniRef50_B5JW38 Exodeoxyribonuclease IX n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW38_9GAMM Length = 382 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 19/254 (7%) Query: 1 MAVHLLIVDALNLIRRIHAVQGS----------PCVETCQHALDQLIMHSQPTHAVAVFD 50 M +VD+ + R V V + QL+ QP+H FD Sbjct: 1 MP-RAHLVDSSIYVFRSWHVMPDTLTDAEGHPANAVYGFADFVLQLLHSEQPSHIGFAFD 59 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + + WR + YKA RPP P EL + R + G+ C+ + EADD+ T Sbjct: 60 LCHAGN-WRREIDAQYKANRPPPPAELKRQFAHCRELLQASGLACFGSDRFEADDIIGTF 118 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 + + + G +TI++ DK QL+ + + + LD I K++G+ P+Q+ D Sbjct: 119 SRSLREQGFVSTIITGDKDLTQLIGEGDEWWEVARNKRLDYRGIHKQWGIYPEQVADLLA 178 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV------AEKWRKKL-ETHKE 223 L G S + GV G+G K+A LL +F ++G+ N+DA+ + K + L H++ Sbjct: 179 LVGDKSDNIAGVPGVGVKTAANLLKKFGDIDGVLNNIDAIGEMKFRSAKRIENLVRMHQD 238 Query: 224 MAFLCRDIARLQTD 237 L + + + D Sbjct: 239 TIRLAKLLTVIPDD 252 >UniRef50_Q9PQ75 5'-3' exonuclease n=15 Tax=Ureaplasma RepID=EX53_UREPA Length = 289 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 124/266 (46%), Gaps = 20/266 (7%) Query: 3 VHLLIVDALNLIRRIHAVQ-------------GSPCVETCQHALDQLIMHSQPTHAVAVF 49 +++D +LI R + ++ + +++ Q T+ + Sbjct: 2 KKAIVIDGNSLIYRAFHATYKQAEWAVEKQLMPTNAIKLVASMIFKILNQEQFTYGLIAM 61 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D ++ +R Q YKA R PM +L ++P L+ F G S G EADD + Sbjct: 62 DASKQT--FRAQEYAAYKATRKPMDAKLIVQLPYLKKLFVAMGFRIISQPGIEADDFVGS 119 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEF-----GVQPQQ 164 + + + TI S+D+ QL++ +++ + F G+ P Q Sbjct: 120 FSNLMNKFDVDTTIYSSDRDMLQLINKNTKLKLLKTGTSVMQEINLTNFSLLNNGILPYQ 179 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEM 224 + +Y GL G SS + GV GIGPK+A LL+++ ++E IY NL+ +A + KL HK+M Sbjct: 180 IIEYKGLVGDSSDNLIGVKGIGPKTAINLLLKYDNIENIYTNLEKIAPSVKNKLIEHKDM 239 Query: 225 AFLCRDIARLQTDLHIDGNLQQLRLV 250 AFL + +A +QTDL D L+ L Sbjct: 240 AFLSKKLAAIQTDLLFDEKLENFVLK 265 >UniRef50_A8FKC7 DNA polymerase I n=20 Tax=Campylobacter RepID=A8FKC7_CAMJ8 Length = 879 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 77/255 (30%), Positives = 116/255 (45%), Gaps = 13/255 (5%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L I+D R++ Q S + + + L + + V D + Sbjct: 2 KTLTIIDTFGFFFRLYYALKGFKNSQGQASGMISGFANFIYSLKNEHKSDYIVFALDSKG 61 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 ++ +R + P+YK R P P EL +++P E+ G S G EADD+ A+ Sbjct: 62 KT--FRSEIDPNYKQNRTPPPPELLEQIPICIEMIEKMGFISVSQEGYEADDIIASFVRT 119 Query: 114 VTQAGHQATIVSTDKGYCQLL-SPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLA 172 I++ DK QL+ I K D +++GV+P Q+ D+ L Sbjct: 120 CEDRDIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEAACLEKYGVKPHQIRDFLALC 179 Query: 173 GISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLETHKEMAFLCRDI 231 G SS +PGV GIG K A LL EF S+EGIYENL V E+ R L KE AFL + + Sbjct: 180 GDSSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLVRNERSRNLLLEGKENAFLSKKL 239 Query: 232 ARLQTDLHIDGNLQQ 246 A L +L + +++ Sbjct: 240 ASLYENLEVQDLIEK 254 >UniRef50_A1QZY0 DNA polymerase I n=1 Tax=Borrelia turicatae 91E135 RepID=A1QZY0_BORT9 Length = 919 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 130/262 (49%), Gaps = 17/262 (6%) Query: 1 MAVHLLIVDALNLIRRIHA-----------VQGSPCVETCQHALDQLIMHSQPTHAVAVF 49 M + ++DALN+I R + + L +I P + + F Sbjct: 1 MKE-IYLIDALNIIFRNYHVMKNNPLTNKKGENVNAFIGFFKTLFFIIKEKNPENLIVTF 59 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D E + +R Q+ P YKA R P+ L ++ ++ + + +P + G EADDL A+ Sbjct: 60 DSE--TQTFRQQKYPSYKATRDAPPDNLIPQIYWIKESLIKANIPMFEIQGYEADDLIAS 117 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRW--LDAPFIDKEFGVQPQQLPD 167 A K + I+S DK QL+S +I + +D ++ K+FGV Q+ D Sbjct: 118 FAKKAEINNYLTYIISPDKDLLQLMSAKTKILKIENSSFVEMDNDYVMKKFGVNKSQIKD 177 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 Y + G S +PG+ GIG K A +LL EFQ+L GIY+NLD++ K+R+ L +E AFL Sbjct: 178 YLSIVGDRSDNIPGIKGIGEKGAAKLLNEFQTLNGIYDNLDSINNKYREILLKERENAFL 237 Query: 228 CRDIARLQTDLHIDGNLQQLRL 249 ++ L DL + L++ +L Sbjct: 238 SYELISLVEDLELP-ALEKFKL 258 >UniRef50_A5IXV4 DNA polymerase I: 5' 3' exonuclease domain n=7 Tax=Mycoplasma RepID=A5IXV4_MYCAP Length = 305 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 83/268 (30%), Positives = 126/268 (47%), Gaps = 27/268 (10%) Query: 5 LLIVDALNLIRRIHAV----------------QGSPCVETCQHALDQLIMHSQPTHAVAV 48 +L+VD LI + + V L +LI PTH Sbjct: 8 MLLVDGNFLIFQSFYASYNKYNPNSVLVAKDGTTTNGVHVFFQTLFKLIKFYNPTHLFIA 67 Query: 49 FDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAA 108 FD + ++ RH+ DYKAGR PE + ++ + + + G EADDL A Sbjct: 68 FDAKGKT--KRHEEYDDYKAGREKAPEIIFEQFDLAKKILSAMNIKWFEKVGYEADDLIA 125 Query: 109 TLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIR-------DYFQKRWLDAPFIDKEFGVQ 161 T+A +Q + I S DK QL++ I ++ + + +G+ Sbjct: 126 TIAKHNSQFNN--YIYSKDKDLLQLVNQNNSIIKVVKKVGNFTEYKLETVNEFADIYGIN 183 Query: 162 PQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETH 221 P Q+PDY GLAG SS K+ GVAGIGPK A LL EF +LE IYEN++ + K ++ LE Sbjct: 184 PNQIPDYKGLAGDSSDKLKGVAGIGPKKAISLLNEFGTLEAIYENINKITGKTKEYLEND 243 Query: 222 KEMAFLCRDIARLQTDLHIDGNLQQLRL 249 E A C+ +A L + + +D N++ ++ Sbjct: 244 CESAHFCKRLAILNSYVEMDTNIEDYKI 271 >UniRef50_Q7VGK4 DNA polymerase I n=8 Tax=Campylobacterales RepID=Q7VGK4_HELHP Length = 912 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 99/258 (38%), Gaps = 15/258 (5%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 L ++D R + + + L L T+ E Sbjct: 2 NTLSVIDTFGFFFRSFYALPPLKNKEGFPTGLLVGFCNLLQSLYKDPSCTYLAFAL--EG 59 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 R Q YK R P P+EL ++P E+ G S G EADD+ A++ Sbjct: 60 GGENKRRQIYDAYKRNRQPPPQELLMQLPIAIEWIEKMGFLNISIEGYEADDVIASINKV 119 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 I+S DK QL+ I D KR + ++GV P+ DY L G Sbjct: 120 ANAQNIVVRIISHDKDLYQLIDENTYIYDPIGKRDIREAECLYKYGVNPKNFIDYQSLVG 179 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDA----VAEKWRKKLETHKEMAFLCR 229 +S + G+ GIG KSA +L+ F S+E +YE V + L K AFL + Sbjct: 180 DTSDNIVGIKGIGAKSAQKLITHFGSIESLYERESELEEVVTPRIAHLLREGKNNAFLSK 239 Query: 230 DIARLQTDLHIDGNLQQL 247 + L DL + +L + Sbjct: 240 KLVTLYDDLLENIDLSKC 257 >UniRef50_O51498 DNA polymerase I n=20 Tax=Borrelia RepID=DPO1_BORBU Length = 908 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 80/263 (30%), Positives = 128/263 (48%), Gaps = 17/263 (6%) Query: 1 MAVHLLIVDALNLIRRIHA-----------VQGSPCVETCQHALDQLIMHSQPTHAVAVF 49 M L ++DALN+I R + + L +I P H + F Sbjct: 1 MKE-LYLIDALNIIFRNYHVMKNYPLLNTQGENVNAFIGFFKTLFFIIKEKNPEHLIITF 59 Query: 50 DDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAAT 109 D E + +R Q+ P YKA R P++L ++ ++ + +P + G EADDL A+ Sbjct: 60 DSEVPT--FRKQKYPSYKATRDLPPDDLIPQIGWIKEGLLKAKIPIFEMEGYEADDLLAS 117 Query: 110 LAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWL--DAPFIDKEFGVQPQQLPD 167 A K + + I+S DK Q +S ++I ++ D ++ K+FGV Q+ D Sbjct: 118 FAKKAAKNNYLTYIISPDKDLLQTMSEYVKILKIENNSFIEMDNEYVTKKFGVNSFQIKD 177 Query: 168 YWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFL 227 Y + G S +PG+ GIG K A LL EF++L+GIY NL+ + +K R+ L KE AFL Sbjct: 178 YLAIVGDRSDNIPGIKGIGAKGAANLLREFKTLDGIYSNLEIINKKHRELLIKEKENAFL 237 Query: 228 CRDIARLQTDLHIDGNLQQLRLV 250 ++ L+ +L I ++ L Sbjct: 238 SYELVSLEENLKIP-EIENFALK 259 >UniRef50_B4D756 5'-3' exonuclease n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D756_9BACT Length = 323 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 66/267 (24%), Positives = 111/267 (41%), Gaps = 21/267 (7%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 + LL++D + R + + + + +++ QP ++D Sbjct: 1 MKLLLIDGHYYVYRSFFAIRELSNSRGEPTNAIYGFIKTVRRMVKDLQPDLGAIMWDMGM 60 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 R P YK R MP+ + ++ ++ G EADDL T AV Sbjct: 61 --PQRRVALQPAYKQQRAEMPDLMRPQLTFIQNLVPMLGFASVWLPDTEADDLMGTYAVA 118 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKR---------WLDAPFIDKEFGVQPQQ 164 G + + DK QL++ +++ + L + K++GV+PQQ Sbjct: 119 ARARGDDVVLATNDKDLFQLVNGNVKVYSTNKTDLAAPSDTHALLGIDAVRKKWGVEPQQ 178 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVA-EKWRKKLETHKE 223 + D L G + +PGV G+GPK A LL SL+ + NLDAV E+ R+KL+ + Sbjct: 179 IGDVLALIGDTVDNIPGVEGVGPKGAATLLNTHGSLDALLANLDAVKNERTREKLKASRA 238 Query: 224 MAFLCRDIARLQTDLHIDGNLQQLRLV 250 R++ RL DL + L L + Sbjct: 239 QIEQNREMVRLDLDLPLPEPLDALAIR 265 >UniRef50_B8GPC5 5'-3' exonuclease n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPC5_THISH Length = 332 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 19/262 (7%) Query: 2 AVHLLIVDALNLIRRIHAVQGS----------PCVETCQHALDQLIMHSQPTHAVAVFDD 51 A L +VD+ + R V L +L+ + P V FD Sbjct: 7 ASPLWLVDSSIYVFRAWFTLPEAITDREGHPANAVTGFGEFLVRLLTRAAPAPVVFAFD- 65 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 E+ +RH+ P+YKA RPP PE L + RA G P +S+ EADD+ TL Sbjct: 66 ESLGQSYRHEIYPEYKANRPPAPESLKRQFRQCRALVTALGFPAFSSPRYEADDIIGTLT 125 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGL 171 + AG +++ DK QL+ P ++ Q R LDA ++K+ GV+P+Q+ D L Sbjct: 126 ARQQAAGGSVHLITADKDLTQLVGPGDLWWEFQQDRRLDARGVEKKLGVRPEQVADQLAL 185 Query: 172 AGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-------KWRKKLETHKEM 224 AG +PGV GIG +A ++L F L+ ++ + D VA+ + + H+ Sbjct: 186 AGDKVDNIPGVPGIGMATAARILRRFGDLDTLFADTDEVAKLHIRGARRLADLVREHEHS 245 Query: 225 AFLCRDIARLQTDL-HIDGNLQ 245 L R + + D+ + L Sbjct: 246 VRLSRRLTGIHCDIEDLPQALD 267 >UniRef50_B5YDJ0 DNA polymerase I n=3 Tax=Dictyoglomus RepID=B5YDJ0_DICT6 Length = 856 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 18/263 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDDE 52 +LI+D +LI R++ + + L + + P FD Sbjct: 19 KRKILIIDGSSLIYRVYYALPPLKTKNGELTNALYGFIRILLKAVEDFNPDLVGVAFD-- 76 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 +RH +YKA RPPM ++L ++P +R +P G EADD+ AT+ Sbjct: 77 RPEPTFRHVIYKEYKAKRPPMKDDLKAQIPWIREFLRLNDIPLLEEPGYEADDIIATIVN 136 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLPDY 168 K I+S D QL+S + + D + FGV+P ++P Y Sbjct: 137 KY--KDDLKYILSGDLDLLQLVSDKTFLIHPQKGITEFTIYDPKAVKDRFGVEPYKIPLY 194 Query: 169 WGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLC 228 L G S +PGV GIGPK A+++L + S++ + + R+ +E + + Sbjct: 195 KVLVGDESDNIPGVNGIGPKKASKILEKISSVDEFKSKIKVLDSDLRELIEKNWNIIERN 254 Query: 229 RDIARLQTDLHIDGNLQQLRLVR 251 ++ L+ ++ D L+ + R Sbjct: 255 LELVTLK-NIDKDLILKPFEIKR 276 >UniRef50_B1ZX82 5'-3' exonuclease n=3 Tax=Verrucomicrobia RepID=B1ZX82_OPITP Length = 320 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 119/257 (46%), Gaps = 20/257 (7%) Query: 1 MAVHLLIVDALNLIRRIHAVQG---------SPCVETCQHALDQLIMHSQPTHAVAVFDD 51 MA L+VD NL R + + +L L ++P V FD Sbjct: 1 MA-KWLLVDGFNLAYRCFYAIPELTRADGFPTNALHGWLKSLWMLADQTKPDACVVFFDL 59 Query: 52 ENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLA 111 R DYKA R MPE L ++P +++ G G E+DDL A+ A Sbjct: 60 GGAQD--RLALHADYKAQREEMPESLARQLPYVKSLTRAMGCVGVEQEGVESDDLLASQA 117 Query: 112 VKVTQAGHQATIVSTDKGYCQLLSPTLRIRDY-------FQKRWLDAPFIDKEFGVQPQQ 164 V +++AGH+ IVS+DK + Q++ ++I R +DA + +FGV P+ Sbjct: 118 VALSRAGHEVLIVSSDKDFAQIVDERVKIMLPPPTANPKLGWRLMDAAGVQAKFGVPPRM 177 Query: 165 LPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAE-KWRKKLETHKE 223 + DY L G +S +PG+AG+GPK+A + L EF++LEG+ + + ++R+ + + Sbjct: 178 IADYLALVGDTSDNIPGLAGVGPKTAAKWLNEFETLEGVMAHCAELKPERFREPICAEAD 237 Query: 224 MAFLCRDIARLQTDLHI 240 + L L + Sbjct: 238 KLRRNLKLTTLNLGLPV 254 >UniRef50_Q8I7W9 Mitochondrial DNA polymerase A n=2 Tax=Eukaryota RepID=Q8I7W9_DICDI Length = 1369 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 121/280 (43%), Gaps = 32/280 (11%) Query: 2 AVHLLIVDALNLIRRIHAVQGS--------PCVETCQHALDQLIMHSQP-THAVAVFDDE 52 H +++D + + +A S + ++ ++I +P V FD + Sbjct: 271 KKHTVLIDGTLMAYKANATTPSLTNEGMNVNVLYGFMRSMLKVIDELKPIDSIVVCFDPK 330 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 S +R P+YK+ RPP P EL ++ + + V G E DDL AT + Sbjct: 331 G-GSSFRRDLYPEYKSNRPPTPPELLQQLLLIPEVTDSINVAFTKVDGYECDDLLATYSK 389 Query: 113 KVTQAGHQ----------------------ATIVSTDKGYCQLLSPTLRIRDYFQKRWLD 150 TQ G++ TIV+ DK QL++ + + + +D Sbjct: 390 LATQEGNKFIEGNDQYDPTHPESNRFNGSQVTIVTDDKDIYQLVNDNVSVYSTRRGSMVD 449 Query: 151 APFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV 210 + +FG +P + + L G +PG+ IG K+AT ++ +F +L I EN+D + Sbjct: 450 KQGVIDKFGFEPNKFVTFQSLIGDKVDNIPGIPRIGEKTATDIIKKFGNLNSIIENIDQL 509 Query: 211 AEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLV 250 +K+ + + + + + +A+L ++ I+ NL ++ Sbjct: 510 PQKFIEPIRSSIDQLRISYQLAKLNDNVSINLNLDDIKYK 549 >UniRef50_B1HWJ8 Probable 5'-3' exonuclease n=2 Tax=Bacillaceae RepID=B1HWJ8_LYSSC Length = 296 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 110/263 (41%), Gaps = 20/263 (7%) Query: 4 HLLIVDALNLIRRIHAV-------------QGSPCVETCQHALDQLIMHSQPTHAVAVFD 50 LLIVD + L+ R + + + +PTH +D Sbjct: 7 KLLIVDGMALLFRSFFASAAMGHFIRLADGTPTNGAQGFVRHVLTAQSLMKPTHMAVCWD 66 Query: 51 DENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATL 110 + +R++ YKA RP PEE+ + + Q G + G EADDL ++ Sbjct: 67 MGAHT--FRNELFDGYKANRPAPPEEMLPQFDMAKNLSLQMGWQNFGVKGMEADDLIGSM 124 Query: 111 AVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQK----RWLDAPFIDKEFGVQPQQLP 166 K Q T++S DK QLL P+ I + +E+ ++P Q Sbjct: 125 IAKW-QDDADITVISGDKDLLQLLRPSTEIAFMKKGYTEYDIYTHGRFKEEYSIEPAQFA 183 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 G +S PGV GIGPK A L+ + S++ + +L + R K++ +M Sbjct: 184 QVKAFMGDTSDGYPGVKGIGPKQALTLIQTYGSIDSVLASLGELKPGQRTKIQDQIDMLK 243 Query: 227 LCRDIARLQTDLHIDGNLQQLRL 249 L ++A +QTD+ I+ +L L L Sbjct: 244 LSHELATIQTDVPIEADLSSLVL 266 >UniRef50_B2KCD2 DNA polymerase I n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCD2_ELUMP Length = 862 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 16/260 (6%) Query: 2 AVHLLIVDALNLIRRIHAVQGS---------PCVETCQHALDQLIMHSQPTHAVAVFDDE 52 + I DA N + R + + L +L+ +P + FD Sbjct: 5 KKTIYIADAHNFLHRNYHALPKLSTSQGLEVGALYGFVRWLVKLVEEKKPHYVAVCFD-S 63 Query: 53 NRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAV 112 S R + DYKA R P+ E L ++ R G+ ++ G EADD+ +A Sbjct: 64 RGGSTKRKKMFSDYKAHRKPVDEALLTQLQLAREVVSGMGLKVFAVQGIEADDIIGFIAK 123 Query: 113 KVTQAGHQATIVSTDKGYCQLLSPTLRIR--DYFQKRWLDAPFIDKEFGVQPQQLPDYWG 170 K G A + ++DK QLL+ +++ ++ ++ ++F + + L DY Sbjct: 124 KSVAEGADAVLATSDKDALQLLNEHIKLWPAGAAKESLKGPDYVKEKFNIAQKYLTDYLA 183 Query: 171 LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRK----KLETHKEMAF 226 + G SS VPGVAG+GPK+A +L+ F LE I + A K +K K+ ++ +A Sbjct: 184 IVGDSSDNVPGVAGLGPKTAAELINNFGYLEDIIKEAKAGNPKIKKGAAQKIIDNEAVAI 243 Query: 227 LCRDIARLQTDLHIDGNLQQ 246 L + + L ++ +D L+ Sbjct: 244 LSKQLVTLDENIPMDFTLED 263 >UniRef50_C1SHV2 DNA polymerase I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHV2_9BACT Length = 798 Score = 239 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 68/255 (26%), Positives = 125/255 (49%), Gaps = 18/255 (7%) Query: 6 LIVDALNLIRRIH---------AVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSS 56 +++D + R + A + + ++ LI + VFD + ++ Sbjct: 3 IVIDGSYIAFRTYHKSPPLTNSAGVPTSVIHGVMQSIITLINKYGRENIAVVFDAKGKNR 62 Query: 57 GWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQ 116 RH+ P+YKA R PE+L + + GV + G E DD+ AT+A Sbjct: 63 --RHEIHPEYKATRDATPEDLGLQFGIMDELIPLLGVAYYKVDGYEGDDIMATIAA---H 117 Query: 117 AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISS 176 +++ DK Q++ ++I D + + + ++FGV P+++ + LAG ++ Sbjct: 118 TKDDVGMLTKDKDIYQIVDDRVKIYDSQKGEFFGRDMVIEKFGVPPEKVRELLALAGDTA 177 Query: 177 SKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQT 236 +PGVAG+G K+A +LL E SL+GIYEN+++V K + KL +K+ A+L D+ L Sbjct: 178 DNIPGVAGVGVKTAAKLLNEHGSLDGIYENIESVKGKLKDKLIDNKDSAYLSYDLVGL-- 235 Query: 237 DLHIDGNLQQLRLVR 251 I ++ + +V+ Sbjct: 236 --DILESIPDVEIVK 248 >UniRef50_D1AV04 DNA polymerase I n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AV04_STRM9 Length = 861 Score = 239 bits (610), Expect = 9e-62, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 132/264 (50%), Gaps = 18/264 (6%) Query: 3 VHLLIVDALNLIRRIHAV---------QGSPCVETCQHALDQLIMHSQPTHAVAVFDDEN 53 +LI+D ++ R + + + L+ + + P + +A D + Sbjct: 2 KKILILDTSAIMYRAYFALMNFRNSNGEPVGAMLGFIKQLELALSYFSPEYVIAAKDVK- 60 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 R+ R + +YK R MP+EL ++ A+ E G+P EADD+ A+++ K Sbjct: 61 RAELKRREIYKEYKENRSGMPDELVMQLDAIDGILEGYGIPIIKIPSYEADDVIASISKK 120 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDA-------PFIDKEFGVQPQQLP 166 ++ ++ I++ DK QL++P I +K + + + GV+ Q+ Sbjct: 121 YSK-DYEIIILTGDKDLAQLINPNTSIALLGKKDENEPYKIIENDEDVIEYLGVKSYQIK 179 Query: 167 DYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAF 226 D +GL G SS +PGV GIGPK+ +L+ E+ +++ IY N+D + +KK+ K++A+ Sbjct: 180 DLFGLIGDSSDGIPGVLGIGPKTGAKLIAEYDNIDNIYANIDNIKGALQKKIIASKDLAY 239 Query: 227 LCRDIARLQTDLHIDGNLQQLRLV 250 + R++A + +L ID N++ ++ Sbjct: 240 ISRELATVFDELDIDLNIEDAKIK 263 >UniRef50_A2SN70 DNA polymerase I n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SN70_METPP Length = 265 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 81/254 (31%), Positives = 125/254 (49%), Gaps = 10/254 (3%) Query: 4 HLLIVDALNLIRRIHAVQG--------SPCVETCQHALDQLIMHSQPTHAVAVFDDENRS 55 LL++D +++RR++ + H++ + + PTH +A FDD + Sbjct: 6 KLLLLDGTSVVRRVYEAVPGDDGPARVDGAITASMHSIKRALGEHLPTHFLAAFDDGGPT 65 Query: 56 SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115 WRHQ LP YK+ R PM E L +P L E G S G EADD+ T+A + Sbjct: 66 --WRHQLLPTYKSTRKPMYEGLRAALPRLYRDMESLGFSWVSPPGVEADDVIGTIAHRAA 123 Query: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175 G + IVS D C LLS +R+ ++F + W D ++ + G+ P Q+ Y GL G Sbjct: 124 ARGFEVVIVSNDVDMCALLSANVRVYNHFAREWRDETWLASQIGITPAQVSAYIGLVGEE 183 Query: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQ 235 VPGVAG+GPK+A +LL + L+G+ + K ++L E L + + L+ Sbjct: 184 KKSVPGVAGVGPKTAAKLLAQHGDLDGVLAAAAEMPGKIGERLRAGAEACRLSQALGTLK 243 Query: 236 TDLHIDGNLQQLRL 249 D+ + QL L Sbjct: 244 LDVDLSIRPSQLAL 257 >UniRef50_A0KHE3 Uncharacterized exonuclease xni n=3 Tax=Aeromonadaceae RepID=XNI_AERHH Length = 267 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 117/257 (45%), Positives = 159/257 (61%), Gaps = 13/257 (5%) Query: 4 HLLIVDALNLIRRIHAVQGSPCVE----------TCQHALDQLIMHSQPTHAVAVFDDEN 53 HLLI+DALNLIRR+HAVQ + + +L+ S+PTH +AVFD E Sbjct: 7 HLLIIDALNLIRRLHAVQAQQALTPAQALIATRANLINTCRKLLAASEPTHVIAVFDGEV 66 Query: 54 RSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVK 113 S WR + P YK GR PMP EL + + L+ AF + GV + +EADDL ATLA Sbjct: 67 HS--WRKEVYPAYKEGRTPMPTELREGLNELQDAFWECGVDALLSQTDEADDLIATLATG 124 Query: 114 VTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAG 173 + Q G +ATI+STDKG+CQL+ P ++IRDYF KRWLDA F+++++GV P QL D+W L G Sbjct: 125 IAQHGARATIISTDKGFCQLICPQIQIRDYFNKRWLDAAFVEQQYGVAPAQLVDFWALTG 184 Query: 174 ISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENL-DAVAEKWRKKLETHKEMAFLCRDIA 232 I S + GV GIGPK+ATQLL ++ L + A K KL H++ A L + + Sbjct: 185 IGGSNIKGVPGIGPKTATQLLQQYGDLASLLAACQQEDAAKALLKLRQHQDEALLAQRLV 244 Query: 233 RLQTDLHIDGNLQQLRL 249 RLQ D+ + NL+++R Sbjct: 245 RLQRDIPLGFNLREIRY 261 >UniRef50_D0KVP7 5'-3' exonuclease, N-terminal resolvase-like domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KVP7_HALNC Length = 324 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 79/275 (28%), Positives = 119/275 (43%), Gaps = 34/275 (12%) Query: 2 AVHLLIVDALNLIRRIHAV----------QGSPCVETCQHALDQLIM------------- 38 ++D+ I R Q ++ AL L+ Sbjct: 11 PSRAWLIDSHAQIWRAWHGAEKTLVDADDQPVGALQGFADALLTLLESVFDQNIQPSVTP 70 Query: 39 --HSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCW 96 P V FD + +R P YKA RPP P EL ++P RA E G+ Sbjct: 71 HAEHGPV-IVCTFDAPC-NRSFRQTIYPAYKAHRPPAPAELTAQLPRCRALAEAAGLCAI 128 Query: 97 STSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDK 156 G EADD+ TL ++ + TI++ DK QLL P R + +++ L +++ Sbjct: 129 DHPGYEADDVIGTLVQRLRKRNRAVTIITGDKDLAQLLGPDDRWFNPMRQKVLAYGDVER 188 Query: 157 EFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV------ 210 FGV+PQQ+ D+ L G S +PGV GIGP+ A LL + +++GIY NL AV Sbjct: 189 HFGVKPQQIADWLALTGDVSDNIPGVPGIGPRIAGNLLKKHGTIDGIYANLAAVYGMKFR 248 Query: 211 -AEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNL 244 A + +K L H+ + L R + + L I+ Sbjct: 249 GAPRVQKLLAEHESLVRLSRQLTGIVCTLPIEHTP 283 >UniRef50_Q1N615 Exonuclease IX n=1 Tax=Bermanella marisrubri RepID=Q1N615_9GAMM Length = 263 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 97/253 (38%), Positives = 143/253 (56%), Gaps = 8/253 (3%) Query: 3 VHLLIVDALNLIRRIHAVQG------SPCVETCQHALDQLIMHSQPTHAVAVFDDENRSS 56 + +L+ DA+NLIRRI+A Q + Q+A+ + I H +P+H VFD +++ Sbjct: 1 MDVLLFDAMNLIRRIYATQQDKPDGVENTLLLSQNAMLKDIEHFRPSHVACVFDGHSKT- 59 Query: 57 GWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQ 116 WRH P YKA R PMP++L +P FEQ G+ C EADD+ ATLAVK Q Sbjct: 60 -WRHTIYPAYKANRNPMPKDLSAALPEFHRRFEQIGIRCLLYDYLEADDVIATLAVKSQQ 118 Query: 117 AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISS 176 G IVSTDKGY Q++ + +F ++ L+ + G +P QL D+ L G S+ Sbjct: 119 RGKSVCIVSTDKGYMQIMDEQTSLYHHFDRKQLNLDDVRSILGFEPSQLVDFLSLVGDST 178 Query: 177 SKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQT 236 ++VPGV GIG K+A +LL +F L+ I + D ++ K ++LE H +A R + L+T Sbjct: 179 NEVPGVDGIGQKTAGKLLDQFGDLDSILIHSDEISGKVGRQLENHFRIALRARKMVTLKT 238 Query: 237 DLHIDGNLQQLRL 249 D + NL+ LR Sbjct: 239 DCELAINLKGLRY 251 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.172 0.514 Lambda K H 0.267 0.0522 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,024,846,337 Number of Sequences: 3077464 Number of extensions: 109366472 Number of successful extensions: 282850 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1108 Number of HSP's successfully gapped in prelim test: 516 Number of HSP's that attempted gapping in prelim test: 277959 Number of HSP's gapped (non-prelim): 1836 length of query: 251 length of database: 1,040,396,356 effective HSP length: 126 effective length of query: 125 effective length of database: 652,635,892 effective search space: 81579486500 effective search space used: 81579486500 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 92 (39.7 bits)