 |
| Job Description | P0AAM3 | | Confidence | 34.40% | Date | Thu Jan 5 11:13:17 GMT 2012 |
| Rank | 21 | Aligned Residues | 46 |
| % Identity | 20% | Template | d1u0la1 |
| SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
| Resolution | 2.80 |
|
|   |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . |
|
|
|
|
|
|
|  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | Q | I | R | T | I | D | G | N | Q | A | K | V | D | V | C | G | I | Q | R | D | V | D | L | T | L | V | G | S | C | D | E | N | . |
G | Q | P | R | V | G | Q | W | V | L | V | H | V |
| Query Conservation |   |
  |
|
|
|   |
|   |   |   |   |
|   |
|
|   |   |
|   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   | . |   |   |
|   |
|
|
|   |
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |
|   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |
| Template Sequence |   |
G | I | V | V | S | F | H | S | N | M | V | T | V | E | D | E | E | T | G | E | R | I | L | C | K | L | R | G | K | F | R | L | Q | N | L | K | I | Y | V | G | D | R | V | E | Y | T | P |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |
| G | G | G | T | T | T | T |
|
|
|
| T | T |
|  |  |  |  |  |
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|