BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (158 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erw... 280 8e-75 UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Ga... 245 3e-64 UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Pro... 227 1e-58 UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Ba... 217 9e-56 UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Pr... 190 1e-47 UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=P... 182 4e-45 UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Ga... 172 4e-42 UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Ga... 165 5e-40 UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Pr... 149 2e-35 UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Prote... 143 2e-33 UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myx... 140 9e-33 UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chrom... 140 9e-33 UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 T... 135 4e-31 UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Sti... 134 1e-30 UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Ba... 130 1e-29 UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria R... 130 1e-29 UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cell... 130 2e-29 UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Pro... 126 2e-28 UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteob... 124 1e-27 UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Hal... 121 9e-27 UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cel... 119 3e-26 UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellu... 117 1e-25 UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrob... 116 2e-25 UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Pol... 114 7e-25 UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibro... 102 3e-21 UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Pr... 100 2e-20 UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 ... 100 2e-20 UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Pr... 97 1e-19 UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neo... 97 2e-19 UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=B... 94 2e-18 UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syn... 92 6e-18 UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB famil... 92 7e-18 UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Des... 92 7e-18 UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylob... 91 9e-18 UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultur... 89 3e-17 UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Pr... 88 8e-17 UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Ba... 88 8e-17 UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergis... 88 1e-16 UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaer... 87 2e-16 UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobac... 87 2e-16 UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax... 87 2e-16 UniRef50_P64276 Transcription elongation factor greA n=48 Tax=de... 86 3e-16 UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Pr... 86 3e-16 UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Pr... 86 4e-16 UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Prote... 86 5e-16 UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Ri... 85 6e-16 UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobac... 84 1e-15 UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfob... 84 2e-15 UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxa... 83 3e-15 UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chl... 83 3e-15 UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Ricketts... 82 8e-15 UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Fi... 81 1e-14 UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultur... 80 1e-14 UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=La... 80 2e-14 UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 ... 80 2e-14 UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Pla... 80 2e-14 UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctom... 80 2e-14 UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mol... 79 4e-14 UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylob... 79 5e-14 UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostrid... 78 7e-14 UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bac... 78 1e-13 UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Ba... 77 1e-13 UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylob... 77 1e-13 UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clo... 77 1e-13 UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitu... 77 2e-13 UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Aci... 76 3e-13 UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicut... 76 3e-13 UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=L... 76 3e-13 UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotel... 75 7e-13 UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gam... 75 7e-13 UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veill... 75 7e-13 UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methy... 75 7e-13 UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pir... 75 8e-13 UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syn... 75 8e-13 UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostrid... 74 2e-12 UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangi... 74 2e-12 UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=The... 74 2e-12 UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=The... 74 2e-12 UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Ba... 73 3e-12 UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=De... 73 3e-12 UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Pro... 73 3e-12 UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodo... 73 4e-12 UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=c... 73 4e-12 UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacter... 72 5e-12 UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Saliniba... 72 7e-12 UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia ... 72 8e-12 UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Ba... 71 9e-12 UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntr... 71 1e-11 UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 ... 71 1e-11 UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacte... 71 1e-11 UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria... 70 2e-11 UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobac... 70 2e-11 UniRef50_UPI00016C498C transcription elongation factor greA n=1 ... 70 2e-11 UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bi... 70 3e-11 UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteri... 70 3e-11 UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria... 69 4e-11 UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus ... 69 4e-11 UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospi... 69 5e-11 UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobac... 69 7e-11 UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuoke... 68 7e-11 UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Pr... 68 8e-11 UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Cl... 68 9e-11 UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chtho... 68 1e-10 UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Myc... 68 1e-10 UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococ... 68 1e-10 UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostrid... 67 1e-10 UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiother... 67 1e-10 UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia ... 67 1e-10 UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachysp... 67 2e-10 UniRef50_C6UNA6 Putative transcription elongation factor GreA n=... 67 2e-10 UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerob... 67 2e-10 UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 ... 67 2e-10 UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Th... 67 3e-10 UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotr... 67 3e-10 UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Ach... 65 8e-10 UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostri... 65 1e-09 UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Myc... 64 2e-09 UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobac... 64 2e-09 UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Act... 64 2e-09 UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermoba... 63 2e-09 UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 ... 63 3e-09 UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bif... 62 4e-09 UniRef50_Q0HPS7 GreA/GreB family elongation factor n=4 Tax=Gamma... 62 5e-09 UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroi... 62 7e-09 UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostrid... 62 8e-09 UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clo... 62 8e-09 UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipel... 60 2e-08 UniRef50_A4YC68 GreA/GreB family elongation factor n=1 Tax=Shewa... 60 2e-08 UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothe... 60 3e-08 UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobac... 59 5e-08 UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehaloco... 59 7e-08 UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Myc... 59 7e-08 UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidi... 59 7e-08 UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Deh... 58 8e-08 UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusi... 58 1e-07 UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Acti... 58 1e-07 UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acido... 57 2e-07 UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Bo... 57 2e-07 UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidat... 56 3e-07 UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Co... 56 4e-07 UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Myc... 56 4e-07 UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Ba... 55 6e-07 UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinse... 55 6e-07 UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/G... 55 7e-07 UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cell... 55 7e-07 UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betap... 55 1e-06 UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verru... 54 1e-06 UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Co... 54 2e-06 UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobac... 54 2e-06 UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Myc... 54 2e-06 UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisp... 54 2e-06 UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomy... 54 2e-06 UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9... 54 2e-06 UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinop... 53 3e-06 UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ur... 53 3e-06 UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=F... 53 4e-06 UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candida... 52 5e-06 UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chtho... 52 6e-06 UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bactero... 52 6e-06 UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pse... 51 1e-05 UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax... 51 1e-05 UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spiro... 51 2e-05 UniRef50_C7MX98 Transcription elongation factor n=1 Tax=Saccharo... 50 2e-05 UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Fla... 50 2e-05 UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Ac... 50 2e-05 UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia m... 50 2e-05 UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bac... 50 3e-05 UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Tre... 50 3e-05 UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Ta... 49 4e-05 UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exigu... 49 4e-05 UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alph... 49 4e-05 UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax... 49 4e-05 UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochro... 49 7e-05 UniRef50_A6NYB0 Putative uncharacterized protein n=1 Tax=Bactero... 48 1e-04 UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh... 47 1e-04 UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Ch... 47 1e-04 UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clost... 47 2e-04 UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Fi... 47 2e-04 UniRef50_UPI0001B58AC8 GreA/GreB family elongation factor n=1 Ta... 46 4e-04 UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gem... 46 4e-04 UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachl... 45 5e-04 UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacte... 43 0.003 UniRef50_B3DVF3 Transcription elongation factor GreA fused to un... 43 0.004 UniRef50_Q6F8Q7 Fragment of transcription elongation factor (Gre... 42 0.006 UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostri... 42 0.007 UniRef50_Q88Q22 Transcription elongation factor, putative n=11 T... 41 0.011 UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candi... 40 0.017 UniRef50_A2VH02 Transcription elongation factor greA (Transcript... 40 0.022 UniRef50_UPI0001AEE145 nucleoside diphosphate kinase regulator n... 39 0.040 UniRef50_B1ZXU0 GreA/GreB family elongation factor n=1 Tax=Opitu... 39 0.051 UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=... 39 0.057 UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deino... 39 0.066 UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deino... 38 0.082 UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotom... 38 0.087 >UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erwinia RepID=D2T9B8_ERWPY Length = 187 Score = 280 bits (717), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 135/156 (86%), Positives = 142/156 (91%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 MKT L+TREGY LKQEL++LWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR Sbjct: 29 MKTKLITREGYNLLKQELDFLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 88 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 RVRYLTKCLE L+IVDYSPQQ+GKVFFGAWVE+ENDDG RFRIVGYDEIFGR DYISI Sbjct: 89 RVRYLTKCLEQLRIVDYSPQQDGKVFFGAWVEVENDDGDIKRFRIVGYDEIFGRNDYISI 148 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 DSPMARALLKKEVGD A V TPAGEA WY+N I YV Sbjct: 149 DSPMARALLKKEVGDAATVFTPAGEALWYINDISYV 184 >UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Gammaproteobacteria RepID=GREB_PSEPK Length = 162 Score = 245 bits (626), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 117/155 (75%), Positives = 136/155 (87%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M T ++T EG+E LK+EL++LWR RPE+T+KV WAASLGDRSENADYQYNKK LREIDR Sbjct: 1 MSTNIITTEGHEALKKELDHLWRVYRPEITQKVAWAASLGDRSENADYQYNKKLLREIDR 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 RVRYL K LE++K+V YSP+QEGKVFFGAWVEIEND+G T +FRIVGYDEI+GR DYISI Sbjct: 61 RVRYLRKRLEDVKVVAYSPEQEGKVFFGAWVEIENDEGETMKFRIVGYDEIYGRNDYISI 120 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 DSPMARALLKKE GD VV+TP GEA+WYV++I Y Sbjct: 121 DSPMARALLKKEEGDEVVVHTPTGEATWYVSSIRY 155 >UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Proteobacteria RepID=C5BN87_TERTT Length = 172 Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 109/155 (70%), Positives = 127/155 (81%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M TPL+T EG KLK EL+YLWR ERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR Sbjct: 17 MSTPLITEEGLTKLKSELDYLWRTERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 76 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 RVRYL K +++LK+V Y+ +QEG V+FG+WV+IEN+ G RIVGYDEIFG K+YISI Sbjct: 77 RVRYLRKRIDSLKVVRYAKEQEGSVYFGSWVKIENEAGENKELRIVGYDEIFGEKNYISI 136 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 DSPMA+ALL+K+VGD A+V T GE W + I Y Sbjct: 137 DSPMAKALLRKKVGDEAIVKTEVGEFCWEIMEISY 171 >UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Bacteria RepID=Q12SN9_SHEDO Length = 166 Score = 217 bits (553), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 111/156 (71%), Positives = 125/156 (80%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 +KT L+T EG KL ELNYLWRE RPE+TKKV WAASLGDRSENADY+ NK+ LR+ID Sbjct: 7 VKTNLITAEGLAKLTHELNYLWREYRPEITKKVAWAASLGDRSENADYKENKRLLRQIDG 66 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFG-RKDYIS 119 RVR+L K +E LK+V Y+ +QEGKVFFGAWVEIEND+GV RFRIVG DEI+G K YIS Sbjct: 67 RVRFLRKRIEALKVVPYAAEQEGKVFFGAWVEIENDEGVKKRFRIVGPDEIYGDAKGYIS 126 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 IDSPMARALLKKEV D A V TP GE WY+N I Y Sbjct: 127 IDSPMARALLKKEVDDDASVLTPTGEQFWYINKIFY 162 >UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Proteobacteria RepID=GREB_HAEDU Length = 162 Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 92/154 (59%), Positives = 122/154 (79%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+ +TR G++ L QEL YLW+EERP+VT+ V+ AA+LGDRSENA+Y Y K+RLREIDRR Sbjct: 3 KSNYITRAGWQALDQELKYLWKEERPKVTQSVSEAAALGDRSENAEYIYGKRRLREIDRR 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 +R+L+K LE L+I+DY PQQ GKVFFGAW+E+EN++G +++RIVG DE K++ISID Sbjct: 63 IRFLSKRLEALQIIDYHPQQAGKVFFGAWIELENNEGEINQYRIVGCDEFDPTKNWISID 122 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ARAL+ K V D V TP G+A +Y+N I Y Sbjct: 123 SPVARALIGKCVDDEIEVQTPTGKAVFYINKIWY 156 >UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=Proteobacteria RepID=GREB_YERPE Length = 171 Score = 182 bits (461), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 93/154 (60%), Positives = 117/154 (75%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+ +TREG++ L +EL+YLWREERP VT+ V+ AA++GDRSENA+Y Y KKRLREIDRR Sbjct: 3 KSNYITREGWQALDRELHYLWREERPVVTQAVSEAAAMGDRSENAEYIYGKKRLREIDRR 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 VR+L K LE LKIVD P+QEGKVFFGAWV +EN+ FR+VG DE K +ISID Sbjct: 63 VRFLAKRLEVLKIVDPDPRQEGKVFFGAWVRVENEQEEQRIFRLVGPDEFDPAKKWISID 122 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ARAL+ K+V D V TP GEA++++ I Y Sbjct: 123 SPVARALIGKQVDDEVTVQTPNGEATYWILEIRY 156 >UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Gammaproteobacteria RepID=GREB_PSEAE Length = 168 Score = 172 bits (435), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 87/153 (56%), Positives = 111/153 (72%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 TPL+T EG +L+ EL+ LW RP+VT+ V+ AA+LGDRSENA+Y Y KK LREID RV Sbjct: 12 TPLITPEGAARLRAELHELWHVRRPQVTQAVSEAAALGDRSENAEYIYGKKMLREIDSRV 71 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 R+L K LENLK+V P +V+FGAWV +E++DG R+RIVG DE+ R + ISIDS Sbjct: 72 RFLRKRLENLKVVGERPADPNRVYFGAWVTLEDEDGEQARYRIVGPDELDLRNNQISIDS 131 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 P+ARAL+ KE+ +V TPAGE W+V IEY Sbjct: 132 PLARALVGKELDAEVLVRTPAGEKLWFVVEIEY 164 >UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Gammaproteobacteria RepID=A6W1U9_MARMS Length = 196 Score = 165 bits (417), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 83/154 (53%), Positives = 109/154 (70%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+ +T+EG + L EL YLW+E+RP VT+ V AA+ GDRSENA+Y Y KK+LREIDRR Sbjct: 38 KSAYITQEGAQALLAELKYLWKEKRPAVTETVREAAAQGDRSENAEYIYGKKQLREIDRR 97 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 VRYL K LE +VD P + +VFFGAWV +E++ G +RIVG DE+ YISID Sbjct: 98 VRYLEKRLEVCTVVDRFPSDQERVFFGAWVTLEDEAGNLKEYRIVGPDELDHHSSYISID 157 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ARALLKK+ GD V+ GE ++ ++A+EY Sbjct: 158 SPVARALLKKQEGDEVVIRLAGGEKTYIIDAVEY 191 >UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Proteobacteria RepID=GREB_XANCP Length = 168 Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 83/155 (53%), Positives = 107/155 (69%), Gaps = 1/155 (0%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 T L+T EG+ +LK EL+ LWR RPEV + + AA+ GDRSENA+Y Y KK+L EIDRRV Sbjct: 12 TALITPEGHARLKAELDELWRLRRPEVVRALAAAAAEGDRSENAEYTYRKKQLGEIDRRV 71 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISID 121 RYL+K LE L++VD +P VFFGA VE+E+ D G R+RIVG DE + +ISID Sbjct: 72 RYLSKRLEALRVVDTAPTDPQAVFFGAQVELEDADSGELLRYRIVGPDETDAGRGWISID 131 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 SP+ARALLKK V D P+G+ ++ V +EY Sbjct: 132 SPLARALLKKRVDDEFEAQLPSGKHTFVVVVVEYA 166 >UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Proteobacteria RepID=Q1H0G6_METFK Length = 165 Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 78/155 (50%), Positives = 103/155 (66%), Gaps = 2/155 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T EGY +LK E L++ ERP+V V WAAS GDRSEN DY Y KKRLR+ID R+R+L Sbjct: 8 ITPEGYARLKDEFEQLYKVERPKVVSDVAWAASNGDRSENGDYIYGKKRLRQIDSRLRFL 67 Query: 66 TKCLENLKIVDYSPQQE-GKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 K ++ +VD + QQ+ K++FGAWVE+ + D H +RIVG DE+ K YIS SP Sbjct: 68 MKRMDIAVVVDPAQQQDLEKIYFGAWVELYSIDKDSEHHYRIVGQDELDPGKGYISWISP 127 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 +ARALL K+ GD+ V TPAGE + + + Y P Sbjct: 128 LARALLGKQPGDVIRVETPAGEERFEIVDVSYHPP 162 >UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myxococcales RepID=A7HDS3_ANADF Length = 169 Score = 140 bits (354), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 69/153 (45%), Positives = 101/153 (66%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T EG+ +L E +W +RP++ +V AA+LGDRSENA+Y Y KK+LRE+DRR+R+L Sbjct: 14 ITPEGFRRLASEHERIWSVDRPKIVAEVEAAAALGDRSENAEYVYGKKKLRELDRRLRFL 73 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 ++ ++ L +VD P G+ FFGAWV IE+D+G FR+VG DE IS+++P+ Sbjct: 74 SERMDALTVVDPRPHPHGRAFFGAWVTIEDDEGEARTFRLVGPDEFDVAAGLISVEAPLG 133 Query: 126 RALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 RALL K+ GD + PAGEA + A+ + P Sbjct: 134 RALLGKQEGDTVLFLRPAGEAELTIMAVRWSPP 166 >UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUF3_CHRSD Length = 178 Score = 140 bits (354), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 70/154 (45%), Positives = 101/154 (65%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+ L+T GY +LK +L R +RP ++ KV AA+LGDRSENADY YNKK L + R Sbjct: 21 KSSLITARGYARLKGIHEHLSRVKRPALSTKVGEAAALGDRSENADYTYNKKELNRVIAR 80 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 +RYL K L+ L++VD P +V+FGA+V +E+DDG RIVG+DE K +IS+D Sbjct: 81 IRYLGKRLDELQVVDRLPADTSRVYFGAYVTLEDDDGEEMTIRIVGHDETDTDKRWISVD 140 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +P+A+A+L K + + VN P G+ ++ + I Y Sbjct: 141 APLAQAMLGKGLDEDVTVNAPGGDTTYIITDIAY 174 >UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=Q0PQI1_9GAMM Length = 166 Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/124 (53%), Positives = 89/124 (71%), Gaps = 1/124 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+P +T +G+++L E LW+ R EV K ++ AA+ GDRSENA+Y Y KK LREIDRR Sbjct: 35 KSPYITSDGHQRLLAEEQGLWKRRR-EVVKALSAAAAEGDRSENAEYIYRKKELREIDRR 93 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 +RYL K + LK+V+ P +VFF AWV +E++ GVTHR+RIVG DEI + DYIS+D Sbjct: 94 IRYLQKRIPELKVVEQPPSNRQQVFFAAWVTLEDEQGVTHRYRIVGPDEIDHQADYISMD 153 Query: 122 SPMA 125 SP+ Sbjct: 154 SPLG 157 >UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q096W9_STIAU Length = 144 Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 71/144 (49%), Positives = 98/144 (68%), Gaps = 1/144 (0%) Query: 14 LKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLK 73 + +EL L ERP+VT +V+ AA+ GDRSENA+Y Y KKRLREIDRR+R+L K L+ Sbjct: 1 MHRELLRLLNVERPKVTAEVSAAAAQGDRSENAEYIYGKKRLREIDRRIRFLQKRLDTAT 60 Query: 74 IVDYSPQQ-EGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKE 132 IV + Q +G+V+FGA V +E++DGV ++IVG DEI + IS++SP+ +ALL+K Sbjct: 61 IVTPAEQTDQGRVYFGATVTLEDEDGVQTTYQIVGSDEIDTQGGRISVESPIGKALLRKA 120 Query: 133 VGDLAVVNTPAGEASWYVNAIEYV 156 VGD V P GE + AI Y+ Sbjct: 121 VGDSVEVMRPRGEIELTIVAIAYM 144 >UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Bacteria RepID=GREB_NEIMA Length = 163 Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 72/153 (47%), Positives = 97/153 (63%), Gaps = 1/153 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T G++ LK EL L +ERPE+ + V WAA GDRSEN DY Y K+R+REIDRR+R+L Sbjct: 9 ITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGDRSENGDYLYGKRRMREIDRRIRFL 68 Query: 66 TKCLENLKIVDYSPQQE-GKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 TK LE +VD ++ +VFFGA V + DG +IVG DEI ++ IS SP+ Sbjct: 69 TKRLEAAVVVDPELREATDQVFFGATVGLLRGDGREQTVKIVGIDEIDTAQNKISWISPL 128 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 AR L+K GD V+NTP G + ++EY+K Sbjct: 129 ARCLIKAREGDEVVLNTPEGREEIEILSVEYIK 161 >UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria RepID=D0J5N8_COMTE Length = 231 Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 71/154 (46%), Positives = 98/154 (63%), Gaps = 1/154 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T +GY+++K EL L ERP++ + V WAAS GDRSEN DY Y KKRLREIDRR+R+L Sbjct: 74 ITPQGYQRIKDELLDLIDNERPKIVEIVHWAASNGDRSENGDYLYGKKRLREIDRRIRFL 133 Query: 66 TKCLENLKIVDYSPQQ-EGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 TK LE ++VD + +VFFGA V +D+GV I+G DE ++ +S +P+ Sbjct: 134 TKRLEIAEVVDPAVHAGSDQVFFGATVSYVDDEGVERTITIMGIDEADSAQNQVSWIAPV 193 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 +RALLK VGD + TPAG + + Y +P Sbjct: 194 SRALLKARVGDEVALPTPAGVRMLEILDVSYPQP 227 >UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cellular organisms RepID=Q2Y7V5_NITMU Length = 213 Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/152 (46%), Positives = 98/152 (64%), Gaps = 2/152 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T EG+++L E +L ERP+VT V+WAA+ GDRSENADY Y KKRLREIDRR+R+L Sbjct: 34 ITPEGHKRLMDEFLWLMNRERPQVTATVSWAAANGDRSENADYIYGKKRLREIDRRIRFL 93 Query: 66 TKCLENLKIVDYS-PQQ-EGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 T+ L+ +I+D S P++ E ++FFGA V N+ G IVG +EI + YIS SP Sbjct: 94 TRRLDMAEIIDPSMPREDESRIFFGATVTYINEKGEEKIVSIVGVNEIDTTRGYISWVSP 153 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +AR LLK GD+ ++ P G + + Y Sbjct: 154 LARTLLKAREGDVVTLHAPGGTEELEILEVRY 185 >UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Proteobacteria RepID=B5ZLJ0_GLUDA Length = 180 Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 72/154 (46%), Positives = 90/154 (58%), Gaps = 1/154 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 VT G ++ ELN L R+ERP + V+WAA GDRSEN DY Y KKRLREIDRRVR+L Sbjct: 23 VTPAGMAAMRGELNALLRDERPRIVDIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRFL 82 Query: 66 TKCLENLKIVDYSPQ-QEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 T+ +E +VD + Q + +VFFGA V +D IVG DE +S+ SP+ Sbjct: 83 TRRIEKAIVVDPAAQTRRDRVFFGATVTYVTEDDTERTVVIVGVDESDLAAGQVSLASPV 142 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 ARALL VGD + TPAG + I Y P Sbjct: 143 ARALLGGRVGDEVRLLTPAGAEMIEILRIAYPAP 176 >UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteobacteria RepID=A2SJD8_METPP Length = 213 Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/151 (47%), Positives = 91/151 (60%), Gaps = 1/151 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T G+ +L+ EL L +ERP+V + V+WAA GDRSEN DY Y KKRLREIDRR+R+L Sbjct: 58 ITPAGFARLRAELMQLLDDERPKVVETVSWAAKNGDRSENGDYLYGKKRLREIDRRIRFL 117 Query: 66 TKCLENLKIVDYSPQQ-EGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 TK LE ++ D S + +VFFGA V DGV I G DE + +S SP+ Sbjct: 118 TKRLEIAEVADPSVHRGSDQVFFGATVTYAAPDGVERTITIKGIDEADNLQAEVSWISPV 177 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 ARALLK VGD + TP G + V + Y Sbjct: 178 ARALLKARVGDEVTLLTPQGPQTIEVIEVRY 208 >UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZQ0_HALNC Length = 175 Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 69/160 (43%), Positives = 97/160 (60%), Gaps = 5/160 (3%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M T +++ G+ +L EL+ LWR ER V + V+ AA+LGDRSENA+Y Y K+RLREIDR Sbjct: 1 MSTAVISARGHARLLAELDQLWRVERRLVVQAVSEAAALGDRSENAEYIYGKRRLREIDR 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 R+RYL K L ++K+V P KV+FGA + + D +VG DEI ISI Sbjct: 61 RIRYLQKRLGDIKVVRQPPTDMNKVYFGARITLLYADDREQTVCLVGPDEIDPANQLISI 120 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEAS-----WYVNAIEY 155 DSP+A+A+L K + V+ P+ ++ + AIEY Sbjct: 121 DSPLAKAVLGKALDAEVVLFLPSETSTPRRVHAEIIAIEY 160 >UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cellular organisms RepID=Q0BR49_GRABC Length = 169 Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 67/138 (48%), Positives = 87/138 (63%), Gaps = 1/138 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T G+ ++ EL L REERP++ + V+WAA GDRSEN DY Y KKRLREIDRRVR+L Sbjct: 15 MTPVGHAQMVAELKQLMREERPKIVEIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRFL 74 Query: 66 TKCLENLKIVDYSPQ-QEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 TK LEN ++D + Q + +++FGA V N T + IVG DE IS+ SP+ Sbjct: 75 TKRLENAVVIDPATQPHKDRIYFGATVTYINAADETVQVTIVGADEADMALGRISLLSPV 134 Query: 125 ARALLKKEVGDLAVVNTP 142 A+ALL GD V TP Sbjct: 135 AKALLGASKGDEVTVITP 152 >UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellular organisms RepID=Q2G8D8_NOVAD Length = 182 Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/151 (39%), Positives = 91/151 (60%), Gaps = 1/151 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T G+ L+ ++L ERP + + V+WAA GDRSEN DY Y +KR+REIDR + +L Sbjct: 29 ITPAGFAALRARYDHLLGTERPAIVEIVSWAAGNGDRSENGDYLYGRKRMREIDRELAFL 88 Query: 66 TKCLENLKIVDYSPQQE-GKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + ++ ++VD + Q++ +V FGA VEI ++D +VG DE K I +P+ Sbjct: 89 ARRMKASRVVDPARQEDRSRVLFGATVEIADEDDNRKVLTLVGDDEQDASKGLIGWSAPI 148 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 A+AL VGDL +V P+G+ W + AI Y Sbjct: 149 AKALRGSRVGDLRIVRLPSGQKEWEIMAISY 179 >UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrobacter RepID=Q2N9J5_ERYLH Length = 159 Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/152 (40%), Positives = 89/152 (58%), Gaps = 1/152 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T GY LK + L ERPE+ + V+WAA GDRSEN DY Y +KR+REIDR + +L Sbjct: 8 ITPGGYAALKARYDRLLGTERPEIVEIVSWAAGNGDRSENGDYIYGRKRMREIDRELAHL 67 Query: 66 TKCLENLKIVDYSPQQE-GKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + +++ ++++ S Q + + FFGA + + ++D +VG DE I SP+ Sbjct: 68 ARRMKHARVIEPSEQPDKDRAFFGATLTLADEDDARKTVTLVGDDEQDASAGKIGWSSPL 127 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 ARAL VGDL V+ P+GE W V AI Y Sbjct: 128 ARALRGARVGDLRTVHLPSGEREWEVMAIAYA 159 >UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Polynucleobacter necessarius RepID=B1XUH7_POLNS Length = 168 Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 71/160 (44%), Positives = 94/160 (58%), Gaps = 9/160 (5%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T GYE++K EL L +R EV K V WAAS GDRSEN DY Y KKRLREIDRR+R+L Sbjct: 7 ITLAGYERIKTELLQLLNLDRLEVVKVVHWAASNGDRSENGDYIYGKKRLREIDRRIRFL 66 Query: 66 TKCLENLKIVDYSPQQEG-----KVFFGAWVEIEN----DDGVTHRFRIVGYDEIFGRKD 116 K LE +VD S ++ G +VFFGA V + G IVG DE+ K Sbjct: 67 NKRLEFAIVVDNSARKSGENDADQVFFGASVTYSALEGPEAGKRTSITIVGVDEVDLDKS 126 Query: 117 YISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 ++S SP+A+AL+K +GD + TP G + ++Y+ Sbjct: 127 HVSWVSPIAKALIKSRIGDCVFIQTPTGPTEIEILDVQYL 166 >UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNS9_FIBSS Length = 169 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 61/154 (39%), Positives = 91/154 (59%), Gaps = 5/154 (3%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 L+++EG+EK K E +L ERP + +V AA+ GDRSENA Y Y + R+REIDRR+R Sbjct: 18 LISKEGFEKFKAEWEHLKYVERPAMINQVQAAAAEGDRSENAAYTYGRMRVREIDRRLRE 77 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR---FRIVGYDEIFGRKDYISID 121 L + L+ +IV+ + ++G + FGA V++ D T R + IVG EI + IS+ Sbjct: 78 LDRILDGAQIVENAATKDGSIRFGATVKM--IDKKTKREKIYSIVGDKEIDPLQGRISMK 135 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ AL K+ GD V P G+ + + + Y Sbjct: 136 SPIGEALQGKKAGDTVEVQAPRGKIVYEILEVNY 169 >UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Proteobacteria RepID=GREA_ALHEH Length = 158 Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/156 (35%), Positives = 90/156 (57%), Gaps = 3/156 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K PL R G EKL++EL L ERP + + + A GD ENA+Y +++ ++ R Sbjct: 3 KVPLTAR-GAEKLREELQRLKTVERPRIIQAIAEAREHGDLKENAEYHAAREQQSFVEGR 61 Query: 62 VRYLTKCLENLKIVDYSP-QQEGKVFFGAWVE-IENDDGVTHRFRIVGYDEIFGRKDYIS 119 ++ + L N +++D + +GKV FGA V+ ++ D G ++IVG DE ++ +S Sbjct: 62 IQEIEGKLSNAQVIDPAAVNAQGKVIFGATVDLVDEDSGKEVTYQIVGEDEADIKQGLVS 121 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 ++SP+ARAL+ KE GDL V P GE + + + Y Sbjct: 122 VNSPIARALIGKEEGDLVTVQAPGGEREYEIVEVRY 157 >UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87FB5 Length = 144 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 87/144 (60%), Gaps = 2/144 (1%) Query: 14 LKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLK 73 +++EL+ L + +RPE K ++WAA GDRSEN DY Y KK+LR+ID R+++L +E+ Sbjct: 1 MQRELSSLIKLDRPETVKVISWAAGNGDRSENGDYIYGKKKLRQIDSRIKFLLTAIEDAD 60 Query: 74 IVDYSPQ-QEGKVFFGAWVEIENDDG-VTHRFRIVGYDEIFGRKDYISIDSPMARALLKK 131 IV S + KV+FGA V++ ++ T RIVG EI IS SP+A+AL+ + Sbjct: 61 IVHPSTSIDKKKVYFGANVKLLDEQSKSTLDIRIVGAHEINHNIGNISWLSPLAKALIGR 120 Query: 132 EVGDLAVVNTPAGEASWYVNAIEY 155 DL V TP ++ + ++Y Sbjct: 121 TSSDLIEVQTPMNIKTYIILKVDY 144 >UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Proteobacteria RepID=GREA_BAUCH Length = 158 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/157 (35%), Positives = 90/157 (57%), Gaps = 3/157 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + P+ R G E+L++ELNYL RPE+ + + A GD ENA+Y +++ + R Sbjct: 3 QIPMTLR-GAEQLREELNYLKNVRRPEIIRNIAEAREYGDLKENAEYHAAREQQGFCEGR 61 Query: 62 VRYLTKCLENLKIVDYSPQ-QEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 ++ + L + +I+D + GKV FG V ++N + +RIVG DE + + IS Sbjct: 62 IQEIESKLSHAQIIDVTKLFPSGKVVFGVTVSVQNLNINEEQTYRIVGDDEANFKHNLIS 121 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 I SP+AR L+ K+ GD+ ++ TP GE + + IEY+ Sbjct: 122 ISSPIARGLIGKKKGDIVLIKTPRGEVKYQILKIEYL 158 >UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neorickettsia RepID=GREA_NEOSM Length = 159 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 91/156 (58%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ +TREGY KL++EL L + +P V V A LGD SENA+Y +K ++ Sbjct: 1 MRKLPITREGYCKLQEELEKLVKVVKPSVVAAVAQARELGDLSENAEYHEARKEQSFVEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 ++R L CL +++D S +V FGA V +EN + ++IVG E ++ IS Sbjct: 61 KIRELQLCLSEAEVIDVSQFTGERVKFGASVTLENMESKSVLIYQIVGNLESDIKEGKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + SP+ +A++ KEVG++ ++ P+G+ ++ + +E+ Sbjct: 121 VSSPIGKAVMNKEVGEIVEIDLPSGKKTYKILGVEF 156 >UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=Bacteria RepID=GREA_ANASK Length = 166 Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 91/158 (57%), Gaps = 1/158 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ +T+ G +LK EL L ERP++ K++ A + GD SENA+Y K++ I+ Sbjct: 1 MQRVPMTKGGLVRLKDELRRLKSVERPKIVKEIAEARAHGDLSENAEYHAAKEKQSHIEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R+ + + + +++D + +V FGA V +E+ + G +RIVG E ++ IS Sbjct: 61 RIAQVEHWIASAEVIDVTKHAGDRVVFGATVSLEDAESGDQVTYRIVGELEADLKQGKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 + SP+ARAL+ + GD VV +P GE + + ++ +V+ Sbjct: 121 VTSPIARALIGRSEGDTVVVRSPGGEKEYEIQSVAFVE 158 >UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=GREA_SYNFM Length = 156 Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 53/140 (37%), Positives = 84/140 (60%), Gaps = 1/140 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+EG+E+LK EL L R+ERP V + + A S GD SENA+Y+ K++ I+ R++ L Sbjct: 6 ITKEGFERLKIELQRLQRDERPMVIRAIEEARSHGDISENAEYEAAKEKQAMIEGRIQDL 65 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + + +IV+ S G+ FG+ V +E+ + G +R+VG E + IS+ SP+ Sbjct: 66 CQKMGECEIVEPSDNDNGRAIFGSTVVVEDTETGEVTSYRLVGPYEADVQSGTISVVSPL 125 Query: 125 ARALLKKEVGDLAVVNTPAG 144 +AL+ KE G+ V TP G Sbjct: 126 GKALIGKEEGEEIRVQTPKG 145 >UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB family n=2 Tax=Cystobacterineae RepID=Q1CX76_MYXXD Length = 167 Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 43/92 (46%), Positives = 63/92 (68%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 L LE++++V+ Q G+VFFGAWVE+E++DG R+RIVG DE + +S++SP+ Sbjct: 74 LAAVLEDVRVVEPDASQAGRVFFGAWVELEDEDGGPVRYRIVGPDESDVKAGRLSVESPL 133 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 ARALL KEVG+ VV+ P G + V A++Y Sbjct: 134 ARALLGKEVGESVVVDRPRGPVEYTVTAVDYA 165 >UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Desulfovibrionaceae RepID=GREA_DESVH Length = 163 Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 53/157 (33%), Positives = 92/157 (58%), Gaps = 2/157 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M + ++ EG+++L++EL+ L ++ERP V + + A GD SENA Y ++R ++ Sbjct: 1 MSSIPISVEGFKQLEKELDRL-KKERPGVIQAIKEAREEGDLSENAGYDAARERQGMLEA 59 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R++Y+ + ++D KV FGA V+IE+ + G + ++G DE K IS Sbjct: 60 RIKYIESRMAQFNVIDLDTISGDKVMFGATVKIEDLESGEEKEYTLLGPDEADYAKGSIS 119 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 + SP+ARA+L KE GD VV+ P G+ + + +I ++ Sbjct: 120 VQSPVARAMLGKEEGDEIVVDAPRGKIHYEIVSIRFL 156 >UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylobacterales RepID=Q30T56_SULDN Length = 174 Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 6/158 (3%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ P+ + EGY+ L +E +L E+P+ ++ AA+LGDRSENADYQ K++LR ID+ Sbjct: 1 MQEPM-SIEGYDVLIEEFKFLLEVEKPKTAQEKLVAAALGDRSENADYQAAKEKLRHIDK 59 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI---ENDDGVTHRFRIVGYDEIFGRKDY 117 R+ YL ++ I+D S KV FG+ V I E+D + I G E Sbjct: 60 RLFYLNAMIQKAHIIDPSTLLHTKVSFGSSVRILDLESDK--EEVYTICGVLESEPENGL 117 Query: 118 ISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 ISI SP+A+ +L K V D + P + + + I Y Sbjct: 118 ISIHSPLAQVMLGKRVSDEFKIQLPLMKKEYEILEIYY 155 >UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultured candidate division OP8 bacterium RepID=Q2Z001_9BACT Length = 156 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 1/151 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T EG +KL+ EL L +RP K + A GD ENAD++ K I R+ YL Sbjct: 6 ITPEGLKKLEAELKRLREVDRPANVKAIEEARGHGDLRENADFKCAKDEQAMIVGRIAYL 65 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + + ++D S +V FGA V ++N D G +R+VG DE + ISI SP+ Sbjct: 66 QGRISHAAVIDPSKLSGNRVVFGARVFLKNLDTGEPIVYRLVGEDEADIEQGSISITSPL 125 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 AR L+++EVG+ A + P+G S+ + IE+ Sbjct: 126 ARGLIRREVGEQAKIAVPSGIKSFEIVKIEF 156 >UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Proteobacteria RepID=GREA_GEOLS Length = 158 Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 5/153 (3%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+E YE L++EL L REERP+V + + A S GD SENA+Y K R I+ R++ L Sbjct: 7 LTKESYEALQEELKRLIREERPKVIQDIAEARSHGDLSENAEYDAAKNRQGFIEGRIQEL 66 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEI---ENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 L +VD + + KV FGA V + +++ +T ++IVG DE + IS S Sbjct: 67 QGKLARAHVVDLTGLKPDKVVFGATVTLYDTASEEEIT--YKIVGEDEADIKLGKISCTS 124 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 P+ +AL+ ++ D V PAG + + I+Y Sbjct: 125 PVGKALIGHKLDDSVKVKVPAGTKEYEIIEIKY 157 >UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Bacteria RepID=GREA_BRUA1 Length = 157 Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 2/156 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K P+ R G+EKLK+EL + + ERP + + + A + GD SENA+Y K+ + R Sbjct: 3 KFPMTPR-GFEKLKEELRWRQQSERPRIIEAIAEARAHGDLSENAEYHAAKEAQSLNEGR 61 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR-FRIVGYDEIFGRKDYISI 120 + L + +++D S ++ FGA V + ++D + ++IVG E ++ ISI Sbjct: 62 INELEDLVARAEVIDVSKLTGDRIKFGATVTMIDEDTEEEKIYQIVGDQEADVKEGRISI 121 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 SP+ARAL+ K GD VN P G S+ + A+++V Sbjct: 122 SSPIARALIGKGEGDTIEVNAPGGSRSYEIIALKFV 157 >UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergistaceae RepID=D1B632_THEAS Length = 164 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 81/141 (57%), Gaps = 1/141 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 ++TREGYEKLKQEL L + R E+ K+ A + GD SENA+Y K+ +++ R+ + Sbjct: 12 IMTREGYEKLKQELASLRGDGRSEIASKLEEARAFGDLSENAEYHAAKEEQEKLESRIMW 71 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L L K+V+ S V GA V++ + D G T+ + +VG +E + + IS SP Sbjct: 72 LEYQLSKAKVVESSDIDTSTVSLGATVQLRDLDTGNTYTYVLVGSEEADPKANRISAQSP 131 Query: 124 MARALLKKEVGDLAVVNTPAG 144 + +A++ + G+ +V P G Sbjct: 132 VGKAIIGRAEGEEVIVRVPKG 152 >UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaeromyxobacter RepID=B4UMG4_ANASK Length = 169 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/153 (36%), Positives = 75/153 (49%), Gaps = 15/153 (9%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 VT EG L++ L L R +R GD + D + RL E+D R+ L Sbjct: 31 VTPEGQAALREALARL-RADR-------------GDAARLPDAE-RPARLGELDARIAAL 75 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 L L ++ EG+V FG WV +E +DG +R+VG DE R+ IS SP+A Sbjct: 76 DATLGALTVLGPEATPEGQVGFGTWVTVEEEDGRRVTWRLVGPDEADARRGLISAGSPVA 135 Query: 126 RALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 RALL + GD+ VN P GEA V A+ P Sbjct: 136 RALLGRRAGDVVEVNRPGGEAELTVVAVRRTAP 168 >UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AU03_RUBXD Length = 154 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 2/151 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T EG+ KL++EL YL R EV +++ A GD SEN++Y K ++RR+ L Sbjct: 1 MTPEGFAKLQEELKYLTEVRRKEVAERIRQAREFGDISENSEYDDAKNEQGLLERRISEL 60 Query: 66 TKCLENLKIVD-YSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 + L N KIVD S +EG V G V + DG F+IVG +E +S SP Sbjct: 61 QRRLRNAKIVDPASSAEEGAVDLGTRVTLRVVGDGRERTFQIVGANEADPASGKLSHASP 120 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 + +ALL++ VG+ V+TP G + + ++E Sbjct: 121 VGKALLRRRVGEKVRVSTPRGATEYEIVSVE 151 >UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIH5_9BACT Length = 159 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 90/159 (56%), Gaps = 12/159 (7%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 + +T+ G ++L++ +N L ERPEV K V A GD SENA+Y+ ++R R ID + Sbjct: 4 SQFITKTGMQRLQKRINELL-AERPEVIKAVAIAREFGDLSENAEYKAARERQRAIDNEI 62 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWV---EIENDDGVTHRFRIVGYDEIF-----GR 114 YL + NLK++D S + V FG + +I + + + +VG +E+ G Sbjct: 63 DYLRRRSANLKVIDTSEFPKDMVRFGTYCVAEDINTKECIC--YHLVGPEELNYYNEEGI 120 Query: 115 KDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 ++ +SI SP+ +ALL K++G++A+V P GE + I Sbjct: 121 QE-VSIVSPIGKALLSKKIGEIAIVKAPIGERKLKIREI 158 >UniRef50_P64276 Transcription elongation factor greA n=48 Tax=delta/epsilon subdivisions RepID=GREA_HELPJ Length = 164 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 2/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K P+ + GY K+ EL L ERP + K++ A GD ENA+Y K++ R I+ R Sbjct: 3 KEPM-SMHGYNKICAELKQLKEVERPNIVKEIDIARGHGDLKENAEYHAAKEKQRFIEAR 61 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L++ + N +++D S KV FG+ ++I N D+ + IVG E K IS Sbjct: 62 IVDLSEIVANAQVIDPSALAHNKVSFGSTIKILNLDNDKEFSYTIVGSVESDPAKGLISF 121 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+A++L+ K GD + P GE+ + + I Y Sbjct: 122 GSPIAKSLIGKSKGDAVSIQLPNGESDFEILDIYY 156 >UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Proteobacteria RepID=GREA_SPHWW Length = 158 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 2/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K P++ EG + L +EL L + ERP + + A + GD SENA+Y K+R +I+ Sbjct: 6 KLPMLA-EGQKMLTEELARL-KAERPLIIDAIEEARAHGDLSENAEYHAAKERQGQIEAS 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + + L +++D S K+ FGA V + +DD R++IVG E + IS + Sbjct: 64 IADIEDRLSRAQVIDPSMLSGDKIVFGATVTLLDDDEKPVRYQIVGQTEADAKTGKISYN 123 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 SP+ RAL+ K+V D V P+G+ + V+ IE++ Sbjct: 124 SPLGRALIGKKVDDEVEVTVPSGDRFYLVSKIEFI 158 >UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Proteobacteria RepID=GREA_PSEPK Length = 160 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 89/155 (57%), Gaps = 6/155 (3%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T +G L++E +L + ERP +++ + A LGD ENA+Y ++ ++ R+R + Sbjct: 8 MTVQGARALEEEHLFLSKTERPRLSQAIGEARELGDLKENAEYHAAREEQGMVEARIRDI 67 Query: 66 TKCLENLKIVDYSP-QQEGKVFFGAWVEIEN---DDGVTHRFRIVGYDEIFGRKDYISID 121 L+N ++D + GKV FG V + N D+ VT ++IVG DE ++ +S Sbjct: 68 EGRLQNSVVIDVTTIPHTGKVIFGTTVVLANTETDEEVT--YQIVGEDEADVKQGKLSSG 125 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 +P+ARA++ KE GD VV TP+G + + ++++ Sbjct: 126 APIARAIIGKEEGDTVVVKTPSGTVEYEIVEVKHI 160 >UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Proteobacteria RepID=Q1H282_METFK Length = 165 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 14/150 (9%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 VT G++ L+Q+ + L +E +P +K D ++RL IDR +RYL Sbjct: 30 VTPHGFKLLQQQASALEQERQPLTMRK--------------DDPAVQQRLAMIDRDLRYL 75 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 LE+ +VD + Q V FGA VE+E+++G +H F IVG DE + +S SP+A Sbjct: 76 QARLESAIVVDPATQPTDTVLFGATVEVEDENGNSHTFMIVGEDEADIATNRVSWVSPLA 135 Query: 126 RALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +AL+ +++GD + PAG + AI Y Sbjct: 136 KALIGQKIGDSVTWHRPAGNLELEIIAIHY 165 >UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Rickettsia RepID=GREA_RICCK Length = 162 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 86/153 (56%), Gaps = 5/153 (3%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T +G++KL+ EL +L ER ++++ + A GD SENA+Y+ +++ I+ R++ L Sbjct: 7 ITAKGFKKLEHELKHLKHVERKKISEDIAEAREHGDLSENAEYEAAREKQAFIEGRIKEL 66 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDG---VTHRFRIVGYDEIFGRKDYISIDS 122 +I+D S + FGA V + +DD VT + +VG E + +SI S Sbjct: 67 EDMAARAEIIDISKLSGDNIKFGATVTLIDDDTEEKVT--YIVVGEYEADITRKRVSIAS 124 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 P+A+AL+ K VGD V TP G S+ V +EY Sbjct: 125 PIAKALIGKSVGDFVEVTTPKGSKSYEVVEVEY 157 >UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobacillus rhamnosus RepID=C7T958_LACRG Length = 165 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 4/154 (2%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T G LKQE+ L + RP K + AA+LGDRSENA+Y K+ LR+++ R+RYL Sbjct: 7 ITPAGLANLKQEVADL-KAIRPAKIKNLAEAAALGDRSENAEYSAAKRELRQLEGRLRYL 65 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 K + K+ +P G WV +E +DD + +VG E ++I+SP+ Sbjct: 66 DKLIRYAKVT--TPAAANLADIGNWVTLEFDDDQDEDTYELVGPAEAGMGAAKLAINSPL 123 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 A+ + VGD V P+G V AI P Sbjct: 124 GAAVRRHHVGDTVTVTAPSGTYQVTVMAISPHAP 157 >UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKN0_DESAH Length = 175 Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 1/146 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T EGY LK+EL L ERP+ K + A + GD SENA++ K R I+ R+ L Sbjct: 26 ITIEGYAALKEELQRLKTIERPQNIKAIEIARAHGDLSENAEFDAAKDRQSFIEGRIGEL 85 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + + KI+D + + V F + V IEN D G + IVG +E K IS+ SP+ Sbjct: 86 GYKIASAKIIDPATVSKDCVRFASRVVIENLDSGEEVEYMIVGQEESDIHKGKISVSSPL 145 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYV 150 ALL K+ GD V+ P G+ ++ + Sbjct: 146 GMALLGKQPGDEIVIQAPGGKRNYEI 171 >UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxalobacteraceae RepID=A6STV7_JANMA Length = 175 Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 1/121 (0%) Query: 36 AASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEG-KVFFGAWVEIE 94 AA D ++ A + LREI++R+ YL +E+ ++VD S +G ++FFGA V+ E Sbjct: 51 AAMQMDAADTAMASAQEASLREIEQRIHYLQTRVESAEVVDASVHADGDRIFFGASVDYE 110 Query: 95 NDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 N G TH IVG DE+ + IS SP+A++LL E GD ++ TPAG +V + Sbjct: 111 NTAGETHTATIVGLDELDPAQGRISWLSPLAQSLLGAEEGDTVLLQTPAGPEELHVLTVR 170 Query: 155 Y 155 Y Sbjct: 171 Y 171 >UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chloroflexi (class) RepID=GREA_CHLAA Length = 157 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 1/140 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +TREG +L+ EL YL ER ++ +++ A LGD SE+ +Y+ KK ++ R+R L Sbjct: 8 LTREGRARLEAELEYLTTVERKQIAERIAAAKELGDISESGEYEDAKKAQALLEGRIREL 67 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 L +++D G+V G+ V + DDG + IVG E R+ IS +SP+ Sbjct: 68 KHLLSRAEVIDEDQASNGEVRVGSSVTVRFEDDGTEETWTIVGSAEANPRQGRISNESPL 127 Query: 125 ARALLKKEVGDLAVVNTPAG 144 ALL K + V+TP+G Sbjct: 128 GAALLGKRARNKVTVHTPSG 147 >UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Rickettsiales RepID=B9KH08_ANAMF Length = 174 Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 7/157 (4%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +TR G++KL+ EL L + ERP++ K ++ A LGD SENA+Y ++R ++ ++ L Sbjct: 19 ITRRGFQKLEAELEAL-KSERPKIIKSISDARELGDLSENAEYHAARERQGLVESKIMEL 77 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEI-----ENDDGVTHRFRIVGYDEIFGRKDYISI 120 +++D S V FGA V + + D +++IVG E K+ ISI Sbjct: 78 ESKRSRAEVIDVSELSGDTVMFGATVTVSVYDEQTDSTGVMQYQIVGEYEADVSKNMISI 137 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWY-VNAIEYV 156 SP+ +LL + GD V TP G+ Y + IE+V Sbjct: 138 KSPLVLSLLGRREGDSVEVKTPRGDYKIYQIMKIEFV 174 >UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Firmicutes RepID=GREA_LEUCK Length = 160 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 1/142 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T EG +KL+ EL L +RPE+T ++ A S GD SEN++YQ K ++ R+ L Sbjct: 9 MTAEGRDKLQAELEDLITRQRPEITNRIQIARSYGDLSENSEYQSAKDEQAFVEGRILTL 68 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 K +EN +I+D + V G V E D + IVG E IS +S M Sbjct: 69 KKMIENAEIIDPNATAADVVSLGKTVTFKELPDEEPETYAIVGSTESDPLAGKISNESAM 128 Query: 125 ARALLKKEVGDLAVVNTPAGEA 146 A ALL K+VGD V P+GE+ Sbjct: 129 AVALLDKKVGDKVSVPLPSGES 150 >UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H062_UNCTG Length = 158 Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 1/145 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +TREG +KL +ELN L + +P + ++ A GD ENA+Y K+ L + RR+ L Sbjct: 6 LTREGRKKLIKELNELQKR-KPLIQDEIASAREHGDLRENAEYCAAKETLANLIRRIMEL 64 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 T + KI++ KVF G V I+++ G +++ IV +E + ISI SP+A Sbjct: 65 TSKIACAKIIEEQNIDSDKVFIGVTVTIKDEYGADYQYAIVDLEEADPVANRISIQSPLA 124 Query: 126 RALLKKEVGDLAVVNTPAGEASWYV 150 + LL G+ V PAG+ + + Sbjct: 125 QGLLGHTAGETVAVELPAGKTKFKI 149 >UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=Lactobacillaceae RepID=A5VME9_LACRD Length = 165 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 6/149 (4%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T GY ++++++ L +++RP +++ A +LGD SEN +Y K+ LR ++ R+RYL Sbjct: 18 MTANGYHEIEEQIAKL-QQQRPAKIEQLKAARALGDLSENTEYSTAKRELRHLESRLRYL 76 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 K L+ +IV +P+ + + G V IE DD + IVG E K IS DSP+ Sbjct: 77 NKQLQYAEIV--TPKNDHTIDLGTTVTIEFEDDHEQETYHIVGKQEADLAKQKISFDSPL 134 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAI 153 +A+L + G V P ++S+ V + Sbjct: 135 GQAILHQTAGTTVTVEAP--QSSYKVKIV 161 >UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37CEA Length = 156 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 1/151 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M ++RE Y+KL ELN L +R EV +++ A S GD SENA+Y K ++ Sbjct: 1 MAVKQMSRESYDKLVAELNDLIINKRKEVAERLKVARSYGDLSENAEYDEAKNEQAILEA 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 + L ++N +IVD S ++ + + I+ D G F IV + R+ IS Sbjct: 61 HIAELQYTIDNAEIVDDSNISVDEIGMSSKITIKRLDTGKIETFTIVSTNHANVREGKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYV 150 SP+ +A +KK VGD+ +V+ PAGE + V Sbjct: 121 DASPIGKAAMKKRVGDVFIVDAPAGELKFEV 151 >UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Planctomycetaceae RepID=GREA_RHOBA Length = 159 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 9/155 (5%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +TREGY K+K E+N + EE P + +K+ A GD ENA+Y ++ + ++ L Sbjct: 7 MTREGYNKIKAEINRMENEEMPMIVQKIAEAREEGDLKENAEYHAQRENQGMLMAKINEL 66 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDY----ISI 120 + I+D S + +V FG V +E+ G +F +VG G +DY I + Sbjct: 67 RDKIARASIIDVSSLPKDEVVFGCTVTVEDVAYGDEEQFTLVGA----GDEDYDSGKILV 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP + L+ K+VG+ A V+ PAG+ + + IE+ Sbjct: 123 TSPFGQGLVGKKVGETAEVDVPAGKLKFKILKIEF 157 >UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZBG3_PLALI Length = 160 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 11/161 (6%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ ++REGY+KLK+E+ L ++ P++ + + A + GD ENA+Y ++ + Sbjct: 1 MELQPISREGYDKLKEEIRKLEHDDMPKIAEAIAEARAEGDLKENAEYHGQREEQGRLQA 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R+ L L + IVD S +G V FG V ++N DDG ++ VG G +DY+S Sbjct: 61 RINSLKSKLASCYIVDKSTLPKGVVAFGTRVTVKNTDDGDIEKYEFVGP----GEEDYMS 116 Query: 120 ------IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+A ALL K+V D + P G ++ + IE Sbjct: 117 DVMKILTTSPLASALLGKKVNDKVSIQVPRGTINYEITEIE 157 >UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mollicutes RepID=GREA_MYCCT Length = 157 Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 49/136 (36%), Positives = 78/136 (57%), Gaps = 2/136 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T+EG E+LK EL L RP+V +++ A + GD SENADY + R E++ R Sbjct: 3 KEIILTQEGLEELKAELKNLLEVTRPKVIEELVEARNQGDLSENADYDAARNRQAEVEAR 62 Query: 62 VRYLTKCLENLKIVDYS-PQQEGKVFFGAWVE-IENDDGVTHRFRIVGYDEIFGRKDYIS 119 ++ + + K++D S G+V G+ VE + + D T +IVG E IS Sbjct: 63 IKEVETLINRAKVIDNSKTHSTGEVKIGSTVEFLSSLDHKTKEIKIVGAIEADPFSRLIS 122 Query: 120 IDSPMARALLKKEVGD 135 +SP+A+A+L K++GD Sbjct: 123 NESPIAKAILGKKIGD 138 >UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylobacter upsaliensis RM3195 RepID=Q4HT85_CAMUP Length = 161 Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ ++ G+EKL EL L +RP V ++ A S GD ENA+Y +++ I+ Sbjct: 1 MEKEAMSSFGFEKLSAELKDLKDNQRPAVVVEIDVARSHGDLKENAEYHAAREKQALIES 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R+ L L +++D + + V FG+ V I + + ++ +VG E K YIS Sbjct: 61 RIAELGGILSRAQVIDPASYEHESVKFGSSVLIMDLESEKESKYTLVGTCESDLEKGYIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 I SP+ARA+L K+ GD V P GE+ + + ++ Y Sbjct: 121 IASPLARAMLGKKEGDEFKVRLPKGESEFEILSVTY 156 >UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostridiales RepID=Q67JL1_SYMTH Length = 157 Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 1/153 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K L++ +G ++L+QEL YL +R EV +++ A GD SEN++Y+ K I+ R Sbjct: 4 KEVLLSLDGLKQLEQELLYLRTVKRMEVAERIKQAREYGDISENSEYEDAKNEQAFIEGR 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISI 120 + L K L N +++D Q+ V G+ V + + + G H + IVG E + IS Sbjct: 64 ILVLEKMLRNARVIDEPVGQQEVVVLGSTVVLRDLEYGDEHTYTIVGTTEADPAHNRISN 123 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 +SP+ RA++ + VG + V+ P G + + AI Sbjct: 124 ESPVGRAIMGQRVGTVVAVDAPDGVFKYEIVAI 156 >UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bacilli RepID=GREA_OENOB Length = 162 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 73/142 (51%), Gaps = 1/142 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 KT +T EG KL+ EL+ L +RP +T ++ A S GD SEN++YQ K ++ R Sbjct: 5 KTYPMTAEGLAKLQAELDDLITNKRPAITSRIQEARSFGDLSENSEYQSAKDEQAFVEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISI 120 V+ L + ++ +++D S + V G + E DG + IVG E IS Sbjct: 65 VKQLQQMIQFAQVIDASSASKNVVTLGKKISFKEVPDGDEETYTIVGSAESDPLSGKISN 124 Query: 121 DSPMARALLKKEVGDLAVVNTP 142 DSPM +ALL + GD + P Sbjct: 125 DSPMGKALLDHKTGDKVEIPLP 146 >UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Bacteria RepID=GREA_LISW6 Length = 160 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 1/149 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T EG KL+ EL L +R EV +++ A S GD SEN++Y K ++ R+ + Sbjct: 9 MTLEGKAKLENELQELKTVKRKEVVERIKIARSFGDLSENSEYDSAKDEQAFVEGRITTI 68 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVE-IENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + N +I+D + G V G V IE DG + IVG E + IS DSP+ Sbjct: 69 ENMIRNAQIIDAAEAHNGLVTLGNTVTFIELPDGEEETYTIVGSAEADPFEGKISNDSPI 128 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAI 153 A+ LL + G+ + TPAG+ + + I Sbjct: 129 AKGLLGHKEGEEVTIQTPAGDMNVKIEKI 157 >UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylobacteraceae RepID=D1B0C0_SULD5 Length = 167 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 85/159 (53%), Gaps = 6/159 (3%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K P+ T GY+KL EL+ L + +RPE ++ A S GD ENA+Y K++L ID R Sbjct: 4 KEPM-TEYGYKKLTDELSDLKKRQRPETVIELDIARSHGDLKENAEYHAAKEKLAFIDSR 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN---DDGVTHRFRIVGYDEIFGRKDYI 118 + L+ + +++D S + KV FG+ + +EN ++ VT + IVG E I Sbjct: 63 IAELSDLVSRSQVIDPSTYEHDKVRFGSTITLENLETNEEVT--YSIVGSTESNPDLGLI 120 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 S SP+++ L+ + V + ++ P G + + I Y + Sbjct: 121 SYHSPLSKQLMGRCVDEEVMIKLPVGTQEYAILNITYCE 159 >UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clostridiales RepID=GREA_CLOAB Length = 158 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 5/152 (3%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 ++T +G +KL++EL YL +R E+T+K+ A S GD SEN++Y K ++ R+ Sbjct: 8 VITYKGVKKLEEELEYLKTTKRKEITEKIKVALSFGDLSENSEYDEAKNDQAFVEGRIAQ 67 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN---DDGVTHRFRIVGYDEIFGRKDYISID 121 + L+N ++D S + V G+ V +++ D+ + F IVG E ++ IS + Sbjct: 68 IENMLKNANVIDESELKNDVVSVGSKVMVKDYQFDEEI--EFSIVGSAEADPIENKISNE 125 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 SP+ AL+ K+VGD VN P G + + AI Sbjct: 126 SPVGSALIGKKVGDEIEVNVPDGVDKYKILAI 157 >UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZQE9_OPITP Length = 166 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 68/149 (45%), Gaps = 13/149 (8%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T G E+L +ELN L ERP + K+ LR++D R R L Sbjct: 31 LTEAGAERLHEELNRLRTVERPALAGAAADLD-------------AKRELRKLDERAREL 77 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 + L +I+ V FGA V ++ +DG T +RIVG DE IS SP+A Sbjct: 78 QQILATAEIISSPAPDRSIVRFGAKVTVKEEDGTTSTYRIVGIDETEFYTGGISFQSPLA 137 Query: 126 RALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +ALL VGD +PAG + IE Sbjct: 138 QALLGASVGDRIQFQSPAGPRQLEIQLIE 166 >UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9R4_ACIC5 Length = 165 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 5/135 (3%) Query: 13 KLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENL 72 KL +++ L E E+ ++ AA+LGD SENA+Y K+R ++ R+ L K + L Sbjct: 8 KLLEDIKQLEHELAHELPAEIKKAAALGDLSENAEYHMAKQRQEFVNARLGQLKKRMAEL 67 Query: 73 KIVDYSPQQEGKVFFGAWVEI---ENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALL 129 +V+ + +V FG+ VE+ D+ + +++V +E K IS SP+ RAL+ Sbjct: 68 SLVNLANIPHDRVAFGSTVEVFDTSKDEKI--EYKLVTSEESDVSKGLISTTSPIGRALI 125 Query: 130 KKEVGDLAVVNTPAG 144 K+VGD A V TP+G Sbjct: 126 GKQVGDTATVVTPSG 140 >UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicutes RepID=C4Z9L9_EUBR3 Length = 185 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/156 (35%), Positives = 84/156 (53%), Gaps = 5/156 (3%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T G +KL+ EL L +R EV++K+ A GD SENA+Y K R+I+ R Sbjct: 27 KKNILTYAGLKKLEDELEQLKVVKRKEVSQKIKEAREQGDLSENAEYDAAKDEQRDIEAR 86 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI---ENDDGVTHRFRIVGYDEIFGRKDYI 118 + + K L+N ++V K+ G + I E D+ + ++IVG E K I Sbjct: 87 IEEIEKILKNAEVVVEEEVDLDKISIGCKIRILDCEFDEEL--EYKIVGSTEANSLKGKI 144 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 S +SP+ +ALL K+VGD V T GE ++ V I+ Sbjct: 145 SNESPVGKALLGKKVGDTVTVETQVGELTYKVLEIQ 180 >UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=Lactobacillus RepID=GREA1_LACPL Length = 156 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 4/149 (2%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T GY ++QE+ L +++RPE + + AA+LGDRSENA+Y K+ L ++ R+RYL Sbjct: 8 MTAAGYHAIEQEIEDL-KQQRPERIRILAAAAALGDRSENAEYSSAKRDLGRLESRLRYL 66 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 K L+ +IV P ++ G +V IE DD +++VG E + IS SP+ Sbjct: 67 NKQLQYAQIV--QPADNDQLDIGKFVTIEFLDDHDQITYQLVGKQEANLEQQKISFTSPI 124 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAI 153 +AL V D+ VN P G V A+ Sbjct: 125 GQALANHTVDDVVTVNAPNGAYQVKVIAV 153 >UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotella copri DSM 18205 RepID=D1PEW3_9BACT Length = 154 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 1/150 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +++EGY++L EL ++ E P V + A GD SEN +Y K+ ++ R+ + Sbjct: 4 MSQEGYDELVAELQHMVNVELPAVRDAIAEARDKGDLSENFEYHAAKREQGKLLSRISFK 63 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 K LEN +++D S + V + ++I N + + + IV E ISI SP+ Sbjct: 64 QKVLENARVIDKSRLKSDTVGLLSKIKITNLANKCSMNYTIVNPHEADLHSGKISIKSPI 123 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 A+ALL K+ G+ +V PAG + ++++E Sbjct: 124 AKALLGKKAGEEVMVKVPAGLLKFRLDSVE 153 >UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gammaproteobacteria RepID=GREA_VESOH Length = 159 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 2/152 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 VT G + L+ L L RP + + + A + GD ENA+Y K+ ++ R++ + Sbjct: 6 VTAFGAKALEAALLKLKDVSRPRIIEDIRIARAHGDLKENAEYHAAKEEQSFVEGRIKEI 65 Query: 66 TKCLENLKIVDYSP-QQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSP 123 L ++I+D + Q+G+ FG + + N D ++IVG DE D IS SP Sbjct: 66 ELKLSRMQIIDVTKLSQDGRCVFGTTITLMNSVDNSEITYQIVGEDEADISLDKISCHSP 125 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +A AL+ E GD +V P G+ + + ++EY Sbjct: 126 IASALMGNEEGDKVIVKAPKGDIVYKILSVEY 157 >UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veillonellaceae RepID=D2RL35_ACIFE Length = 172 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 7/154 (4%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 ++T EG +KL+ EL+YL E+R +V +++ A S GD SEN++Y K ++ R+ Sbjct: 6 ILTEEGLKKLEDELDYLRSEKRQQVAERLKVAISYGDISENSEYDDAKNEQAFVEGRILT 65 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTH---RFRIVGYDEI--FGRKDYIS 119 L + N +I+ + + V G V+IE D TH + +VG E IS Sbjct: 66 LENMIRNAQIIKDTDITKNVVSLGCKVKIE--DMETHDQEEYTVVGTTEADPMAEPPRIS 123 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 +SP+ +A+L ++VG + V TP GE + + A+ Sbjct: 124 NESPVGKAILGQKVGAVVKVTTPIGELDYKIVAV 157 >UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae RepID=C6WVB7_METML Length = 168 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 62/111 (55%) Query: 45 NADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFR 104 AD + K ++ EI+R +RY+ L++ +VD + Q V FGA +E+E+ G H F Sbjct: 56 TADDTFAKDKVAEIERDLRYVRARLDSAILVDPTKQSHETVLFGATIEVEDGAGAQHTFH 115 Query: 105 IVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 IVG DE + +S SP+A++LL ++VGD PAG + + I Y Sbjct: 116 IVGEDEADASINKVSWVSPLAKSLLGQKVGDTVTWQRPAGNINLEILDIHY 166 >UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R891_9PLAN Length = 164 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 11/150 (7%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +TREGY KLK EL+ + + P++T+K+ A + GD ENA+Y ++ + ++ + Sbjct: 7 MTREGYAKLKAELDRMENVDMPDITQKIADARAEGDLKENAEYHAQREAQGLLQAKINLI 66 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDY----ISI 120 L I+D S +V FG V +++ D F +VG G +DY I I Sbjct: 67 RNKLSKASIIDPSTMPRDQVSFGTTVLVKDIDMDEEEEFTLVGA----GEEDYNAGRILI 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYV 150 SP+ +AL+ K++GD VV+ PA + S+ + Sbjct: 123 TSPLGQALVGKKIGD--VVDVPAPKGSYQL 150 >UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syntrophus aciditrophicus SB RepID=GREA_SYNAS Length = 161 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 2/154 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+ G+E LK+EL +L P K + A + GD SENA+Y K++ + +++ L Sbjct: 6 ITKSGFENLKKELEHLKCVLIPANIKDIEIARAHGDLSENAEYTAAKEKQSFLHGKLQEL 65 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 L ++D + ++ FGA V IE G +++VG E ++ IS+ SP+ Sbjct: 66 ENNLALSNVIDLKMLSDDRIVFGATVIIEEASTGKQTNYQLVGPFESNISENKISVTSPI 125 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 +AL+ K +GD V+TP G ++ V I Y+ P Sbjct: 126 GKALIGKSIGDEVKVHTPGGIRNFEVVDI-YINP 158 >UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostridium acetobutylicum RepID=Q97HP4_CLOAB Length = 158 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 26/154 (16%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 + ++T+ Y+KLK+E Y +R E+ KK AA+ GDRSENA+Y+ K+ +RR+ Sbjct: 2 SRMLTKSDYDKLKEEYEYRNTVKRHEIAKKKMEAAAFGDRSENAEYKAAKEEYYHNNRRL 61 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRK------- 115 +++ L+N IV+ + + +V G+ + ++ +G DE F K Sbjct: 62 GQISRLLKNAIIVE-EDKIDDEVNIGSEMLLK-----------IGADETFKAKLVTTLNI 109 Query: 116 -------DYISIDSPMARALLKKEVGDLAVVNTP 142 +YIS+DSP +AL KK VGD VN P Sbjct: 110 SVEDEDIEYISVDSPFGKALYKKHVGDSIDVNLP 143 >UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKY5_HALO1 Length = 169 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 1/152 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T G+ +K +L L +RP K + A GD SENADY K+ I+ R+R Sbjct: 7 MTPSGHAWMKAQLKKLKEVDRPANAKAIEVARGHGDLSENADYDAAKEEQGMIEARIREY 66 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 L +++D + +V FGA V +E+ D G + IVG E + IS+ +P+ Sbjct: 67 EAKLALSEVIDPTKLSGERVKFGATVTVEDIDTGDEATYTIVGEHEADIKNKRISVTAPV 126 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 ARAL+ K +GD V TP G ++ + ++++ Sbjct: 127 ARALIGKAIGDETQVQTPKGTRAFEIVDVKWL 158 >UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=Thermomicrobia (class) RepID=B9KZF4_THERP Length = 156 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 4/153 (2%) Query: 4 PLV-TREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 P+V T EG L+QEL +L + + P + +++ ++ GD S+N++Y+ K+ L + R+ Sbjct: 6 PIVLTPEGKAALEQELEHLRQHKLPLLLERLQQLSNEGDISDNSEYEDTKEELVLTEARI 65 Query: 63 RYLTKCLENLKIVDYS-PQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 R + L +++ + PQ E V G+ V + +++G + IV +E + ISI+ Sbjct: 66 REIEHILRRAQMITRAGPQDE--VRLGSRVTVIDEEGSVETWVIVSPEEANAAQGRISIE 123 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+ ALL K VG V P GE + + IE Sbjct: 124 SPVGAALLGKRVGTTVTVRAPGGEMRFTIQRIE 156 >UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=GREA_THERP Length = 156 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 2/140 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +TREG E L+QE YL + RPE+ + + A GD ENA Y K I+ R+R + Sbjct: 8 ITREGLEALRQEYEYLVKHRRPEIARVIQEAREHGDIRENAAYDAAKHDQAFIEGRIREI 67 Query: 66 TKCLENLKIVDYSPQQEGKVF-FGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + L+ +++++ + V G+ V IE DG + IVG E IS +SP+ Sbjct: 68 EELLKRVELIEQPTDGDRSVVRVGSTVTIEI-DGEIETYTIVGAIEAKPSAGRISNESPV 126 Query: 125 ARALLKKEVGDLAVVNTPAG 144 RALL G++ + TP G Sbjct: 127 GRALLGHRAGEIVPIETPNG 146 >UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Bacteroidetes RepID=GREA_FLAPJ Length = 158 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 1/139 (0%) Query: 7 TREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLT 66 T EG +KLK EL L ERP+ + + A GD SENA+Y K+ ++ +++ + Sbjct: 8 TAEGLKKLKDELEQLKAIERPKASADIAEARDKGDLSENAEYDAAKEAQGLLELKIKKME 67 Query: 67 KCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 + N +++D S K + V+I+N +G+ + +V E + IS+ SP+ Sbjct: 68 EVYSNARLIDESQLDVSKALVLSHVKIKNQSNGMEMSYHLVAESEADLKTGKISVTSPIG 127 Query: 126 RALLKKEVGDLAVVNTPAG 144 + LL K VG++A + P G Sbjct: 128 KGLLGKSVGEIAEITVPNG 146 >UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=Desulfovibrionales RepID=GREA_DESMR Length = 164 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 1/133 (0%) Query: 27 PEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVF 86 P V + A GD ENA Y+ ++R ++ R+ Y+ + ++D + +V Sbjct: 26 PGVILAIKEAREEGDLRENAGYEAARERQGMLEARINYIESRMSRFNVIDLATLGGEQVI 85 Query: 87 FGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGE 145 FGA VEIE+ D G ++ ++G DE K IS+ SP+ ALL K VGD VV+ P G+ Sbjct: 86 FGATVEIEDVDTGDVKKYTLLGPDEAEPSKGSISLLSPVGLALLGKFVGDEIVVDAPRGK 145 Query: 146 ASWYVNAIEYVKP 158 ++ + +I + P Sbjct: 146 INYEIVSIAFHGP 158 >UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Proteobacteria RepID=GREA_AZOC5 Length = 157 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 2/150 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K P+ T G+ L++EL + + ERP + ++ A + GD SENA+Y K+ + R Sbjct: 3 KIPM-TGAGFVALEEELRFRQQVERPRIISAISEARAHGDLSENAEYHAAKELQSLNEGR 61 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRF-RIVGYDEIFGRKDYISI 120 + L + +++D S V FGA V + ++D R +IVG E + ISI Sbjct: 62 IAELEDKISRAEVIDVSKLSGDIVKFGATVTLVDEDTEEERVWQIVGDSEADAKAGRISI 121 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYV 150 SP+ARAL+ K+ G V TP G S+ + Sbjct: 122 SSPVARALIGKKKGSSVEVVTPKGARSFEI 151 >UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodobacter sp. SW2 RepID=C8S319_9RHOB Length = 167 Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/100 (42%), Positives = 55/100 (55%) Query: 59 DRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYI 118 +R +RYL L + VD S Q G+V FGA VE+ DG ++I G DE ++ I Sbjct: 66 ERDIRYLEARLRSAIPVDPSSQPAGEVAFGARVEVALADGSRQVWQITGEDEADATQNRI 125 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 + SP+ARALL EVGDL + P+G V AI Y P Sbjct: 126 APQSPLARALLGAEVGDLVIWRKPSGPVELEVLAIAYADP 165 >UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=cellular organisms RepID=GREA_BACCR Length = 158 Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 1/153 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 KT +T+EG +KL+ EL L R EV +++ A S GD SEN++Y K ++ R Sbjct: 5 KTYPMTQEGKQKLENELEQLKTVRRKEVVERIKIARSFGDLSENSEYDAAKDEQAFVEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISI 120 + L + N I+ + + V G V E +G + IVG E + IS Sbjct: 65 ITQLENMIRNAVIIKDTGEVSTVVTLGKTVTFKELPNGDEEAYTIVGSAEADPFEGRISN 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 DSP+A++LL K++G+ + TP GE + ++ Sbjct: 125 DSPIAKSLLGKQIGEKVTIQTPGGEMQVEIVSV 157 >UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYY1_9FIRM Length = 158 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 7/151 (4%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 T +T++G E+ ++E + L R EV ++ A + GD SEN++Y K E++ R+ Sbjct: 4 TVFLTQKGLEEKQKEYDELVGVRRKEVADRIKEATAYGDLSENSEYDAAKNEQAELEERI 63 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR----FRIVGYDEIFGRKDYI 118 L L N +I+D + + V G V ++N +T + +RIVG E + I Sbjct: 64 SVLEDMLNNYEIIDSNAAKGDVVDLGLNVHLKN---ITKKKEETYRIVGSAEADPFNNLI 120 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWY 149 S +SP+ + LLK +VG+ ++ P+G+ Y Sbjct: 121 SNESPIGKGLLKHKVGETVSIDIPSGKTVKY 151 >UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2N3_SALRD Length = 164 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 1/136 (0%) Query: 19 NYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYS 78 + L EER + ++ A + GD SENA+Y K+ +++ R++ + + +IVD S Sbjct: 27 HQLKTEERSRIADEIAEARAKGDLSENAEYDAAKEEQGKLEARIKQIEDTIARARIVDES 86 Query: 79 PQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLA 137 + K + + V +EN D G F +V +E ++ IS+DSP+ LL +E GD Sbjct: 87 TVDDSKAYILSDVTVENLDTGDEQTFTLVSEEEANISENKISVDSPIGEGLLAQEEGDEV 146 Query: 138 VVNTPAGEASWYVNAI 153 ++ PAG + + I Sbjct: 147 SIDVPAGTVHFKIKDI 162 >UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N7T1_SLAHD Length = 155 Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 4/141 (2%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 ++T EG EKL+ EL YL E+R EV +++ A GD SEN++Y K ++ R+ Sbjct: 6 VLTPEGKEKLEAELLYLENEKRAEVGERIKIAREFGDISENSEYDDAKNEQGMLEVRIAQ 65 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR-FRIVGYDEIFGRKDYISIDSP 123 + L N +V+ +P++ +V G+ V + D G R F IVG E + IS DSP Sbjct: 66 INDILANATVVE-APKRSNRVTVGSTVTV--DMGGRERVFTIVGGAEANAAEGKISNDSP 122 Query: 124 MARALLKKEVGDLAVVNTPAG 144 + LL + GD P G Sbjct: 123 VGSVLLGSKKGDQLTTEGPTG 143 >UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Bacteria RepID=GREA_CHLCH Length = 160 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 3/155 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T +GY +LK+EL L + R EV +K+ A + GD SENA+Y ++ +I+ R+ L Sbjct: 7 LTNDGYNRLKEELYVLVHQTRKEVLEKIAEARAHGDLSENAEYDAAREEQSQIEARIGDL 66 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTH--RFRIVGYDEIFGRKDYISIDSP 123 L I+D + KV+ V++ N D + +V +E IS+ SP Sbjct: 67 ESKLSAATILDPKQIKTDKVYILTSVKLRNLDNPDEIIEYTLVSSEEADTDAGKISVRSP 126 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 + R+L+ K VG + P GE + + I +VKP Sbjct: 127 VGRSLIGKTVGAKVTIVVPKGELHYEILEI-FVKP 160 >UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LES5_SYNFM Length = 155 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 10/158 (6%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 MK P +TR GY +L +EL +L RPEV +++ A + G + EN Y ++R + + Sbjct: 1 MKVP-ITRLGYHRLLRELFFLRHVVRPEVIEELQEARTGGIKIENQQYMLARERHMVLQK 59 Query: 61 RVRYLTKCLENLKIVD----YSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRK 115 +++ L + L + +IV + Q E FG V I+N + G T R+++VG E Sbjct: 60 KIQDLERKLASCEIVVGRKFFFKQAE----FGTIVVIQNIETGETQRYQLVGPYESNVVD 115 Query: 116 DYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 +SIDSP+ R L+ + G+ +V TPAG + V +I Sbjct: 116 GKLSIDSPVGRHLVGRREGEEVLVYTPAGVRMYRVVSI 153 >UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31C12 Length = 154 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 2/139 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+EG + L+ EL L R E+ ++ A GD ENA+Y K+ ++ R+ L Sbjct: 7 ITQEGLDALRAELEQLETVARREIAARIRTAREWGDLKENAEYHAAKEDQAHLETRILKL 66 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 + N + + S + V FG+ VE+E G R+ +VG E R +SI+SP+A Sbjct: 67 RERERNATVTEASSDVD-IVAFGSTVEVET-GGKNARYTLVGAAEASARDGKLSIESPVA 124 Query: 126 RALLKKEVGDLAVVNTPAG 144 RAL+ G+ V TP+G Sbjct: 125 RALIGARAGEDVQVQTPSG 143 >UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514 RepID=B9XEY1_9BACT Length = 170 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 13/150 (8%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T +G ++L+ ELN L E+R + + G+ S NA + ++ + + + L Sbjct: 33 LTPDGAQRLRAELNRLQAEKRSQT--------ATGEFSGNA-----QTEMQLVGQHILQL 79 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 + L +IV PQ +V FGA V + ++ G R+RIVG DE +D++S SP+A Sbjct: 80 EQSLATAEIVPPPPQPWEQVRFGATVTVRDESGNETRYRIVGVDETDIDRDWVSWLSPIA 139 Query: 126 RALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 RAL+ +G+ PAGE + +I Y Sbjct: 140 RALINARIGERVHFRFPAGEKQLEIVSITY 169 >UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria RepID=B0N6V6_9FIRM Length = 161 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 3/138 (2%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 L+T+ G EKL+QE + L ERP+V +++ A S GD SENADY +++ ++ R++ Sbjct: 7 LLTQSGVEKLEQERDNLINVERPKVIEELQLARSQGDLSENADYDAAREKQAHLESRIKE 66 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEI---ENDDGVTHRFRIVGYDEIFGRKDYISID 121 + L+N +++ V G V I D ++IVGY E IS + Sbjct: 67 IDYMLQNAEVISEEQMDLKVVKPGTTVTILDLSEKDAEPESYQIVGYTETDPLNGKISNE 126 Query: 122 SPMARALLKKEVGDLAVV 139 SP+A+A+L V ++ V Sbjct: 127 SPLAKAVLGHGVNEIVTV 144 >UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobacteriaceae RepID=C8W826_ATOPD Length = 159 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 73/146 (50%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 ++T EG +KL EL Y E+ E+ +++ A GD SEN++Y K+ + R+ Sbjct: 8 VLTPEGRQKLVDELAYREGEKHDEIVERIKEARGFGDLSENSEYDAAKEEQSHNESRINE 67 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + + L K+V+ +++ V G VE+ + G T ++ IVG E + IS +SP Sbjct: 68 IRQILSVAKVVEGGSKRKVTVAIGTTVELADAKGKTTKYVIVGTTETNSLEHKISNESPA 127 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYV 150 AL+ + GD TP G+ Y Sbjct: 128 GEALIGHKKGDEVEFTTPNGKVKKYT 153 >UniRef50_UPI00016C498C transcription elongation factor greA n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C498C Length = 161 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 1/146 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +TREGY+KLK EL+ L E E+TK+V A LGD SENA+Y ++ + R+ L Sbjct: 8 MTREGYDKLKVELDRLRGAEMIEITKRVAAARDLGDLSENAEYHAAREDQGILQARIDAL 67 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + L IVD S + V FG+ V + + D F +V + K I SP+ Sbjct: 68 SDRLSRAVIVDTSNLPKDTVAFGSKVRVLDVDVDEEETFELVSPGQENPDKGRILTGSPI 127 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYV 150 + L+ ++ GD + P+G + + Sbjct: 128 GQGLIGRKKGDTVEIQVPSGTIKFKI 153 >UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bifidobacteriaceae RepID=B8DTJ6_BIFA0 Length = 160 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 80/145 (55%), Gaps = 6/145 (4%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K L+T+E Y+K+K+EL + E R E+T+++ A + GD SEN YQ ++ + + R Sbjct: 6 KVVLLTQEAYDKMKEELAHREGEYRDEITERIAAARAEGDLSENGGYQAAREEQSKNEGR 65 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDY--IS 119 + L L N KI++ +P+ G+V G+ V IE G ++G +I DY IS Sbjct: 66 INELIVKLRNAKIIE-APKA-GEVGNGSLVTIEL--GGNEMQYVIGSRDITVATDYDVIS 121 Query: 120 IDSPMARALLKKEVGDLAVVNTPAG 144 +SP+ A++ +VGD+ P G Sbjct: 122 PESPIGGAIIGHKVGDVVTYKAPNG 146 >UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteria RepID=D0J9T5_BLASP Length = 162 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 1/138 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+EG +KL+QE+ L ERP+++ ++ A GD SENA+Y K+ ++ + L Sbjct: 9 ITKEGLKKLQQEIERLENIERPKISMQIAEARDKGDLSENAEYDAIKEAQEFLEMNIAKL 68 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSPM 124 K L N +I+D S +V + V ++N G + +V E + ISI++P+ Sbjct: 69 KKKLSNARIIDGSQINRTRVSILSTVRVKNLTYGGEQIYTLVPEGEADLKSGKISINTPI 128 Query: 125 ARALLKKEVGDLAVVNTP 142 + LL K+VG +A + P Sbjct: 129 STGLLGKQVGQIAHIKLP 146 >UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria RepID=A3ESJ0_9BACT Length = 160 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/151 (33%), Positives = 82/151 (54%), Gaps = 1/151 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+ GYEKLK+EL L EERP+ + + A + GD SENA+Y K+R I+ R++ L Sbjct: 6 MTKAGYEKLKEELEKLKHEERPKNIQDIAEARAHGDLSENAEYHAAKERQGFINSRIKEL 65 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVE-IENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + + +V + Q ++ FGA V + D R+ +VG +E + IS+ SP+ Sbjct: 66 EAKIASAIVVSSAHQDHSRITFGATVRLVPLDSKEEKRYTLVGQEEADLKAGRISVHSPV 125 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +AL+ G+ + PAGE + + I Y Sbjct: 126 GKALIGHSEGETVTIRVPAGEVQYTIAEIFY 156 >UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus RepID=Q5SKM1_THET8 Length = 155 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 10/161 (6%) Query: 1 MKTPL-VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREID 59 MK P+ +T EGY +L++ELN+L +R E++ A GD ENA Y ++ + + + Sbjct: 1 MKKPVYLTPEGYRRLQEELNHLKTVKRQEISADFEQALEEGDLRENAGYDEARRAMWQNE 60 Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDE--IFGRKDY 117 R+ L L IV+ +V G VE+E + G IVG E IF K Sbjct: 61 ARIAQLEDLLSRAVIVENGSFD--QVALGCQVELETETGERLSLAIVGSHEADIFSGK-- 116 Query: 118 ISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 IS +SP+ +ALL K+VGD+ + G+ V I +KP Sbjct: 117 ISDESPLGQALLGKKVGDVVEIR---GKKGAQVYTILEIKP 154 >UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospira RepID=Q04UP0_LEPBJ Length = 927 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 1/147 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 LVTR + K+E +L E PE +K + A GD ENA+Y+ +R ++ ++ Sbjct: 768 LVTRRALNRKKEEFEHLLNVEMPENSKDIGEAQERGDLRENAEYKAAMERQVQLQAAIKR 827 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSP 123 L +++ I+D + + K+ G +++N+ G + I+G + K IS SP Sbjct: 828 LEAEIKSAIILDLTNVKTDKINIGVTAKLKNESTGEVVAYSILGAWDADTEKHIISYQSP 887 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYV 150 +A++LL K+VGD AV+N E + V Sbjct: 888 LAKSLLGKKVGDAAVLNLTGAETRYTV 914 >UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03RN4_LACBA Length = 132 Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 66/130 (50%) Query: 25 ERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGK 84 +RP+V ++ A S GD SEN++Y+ K ++ R+ + + L+ +I+D + + Sbjct: 3 QRPKVIDRIKIARSYGDLSENSEYESAKDEQSMLETRISTVERMLQYAQIIDNDDTDKDE 62 Query: 85 VFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAG 144 + G V + DD + IVG E IS DSP+A+ LL VG+ TP G Sbjct: 63 ITVGKKVTFQEDDDEPEEYTIVGAAEADPMSGKISNDSPIAKGLLGHRVGETVTFPTPGG 122 Query: 145 EASWYVNAIE 154 + + V A++ Sbjct: 123 DMTVKVIAVD 132 >UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ19_9FIRM Length = 156 Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 3/144 (2%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T EGY KL ++LNYL +R E+ +++ A +LGD SEN++Y K ++ Sbjct: 4 KQVMLTEEGYNKLVEKLNYLKSVKRIEIAQRLKAAIALGDLSENSEYDDAKNEQAFLEGE 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISI 120 ++ LT + N I+ V G+ V +++ + G F +VG E + IS Sbjct: 64 IQDLTAKIRNSHIIKAGAGD--VVQMGSKVTVKDIEFGDEETFMLVGSTEADPDEGKISN 121 Query: 121 DSPMARALLKKEVGDLAVVNTPAG 144 +SP+ +ALL ++ G + V+ PAG Sbjct: 122 ESPLGQALLGQKSGSVIDVHAPAG 145 >UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Proteobacteria RepID=GREA_BUCCC Length = 159 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 54/157 (34%), Positives = 81/157 (51%), Gaps = 3/157 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K P+ R G+ KLK EL L RP + K + A LGD ENA+Y ++ + R Sbjct: 4 KIPMTLR-GFNKLKSELKKLKYITRPCIVKAIANARQLGDLKENAEYHSAREEQSFCENR 62 Query: 62 VRYLTKCLENLKIVDYSPQQ-EGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYIS 119 + + L +I+D + +G V FG+ V + + + IVG DE ++ IS Sbjct: 63 ICEIENKLLRAQIIDITKIPFKGIVIFGSTVTVLQISTSNIFVYTIVGDDEANYKEFSIS 122 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 I SPM+RAL+ K+ D+ VNTP G + + IEY+ Sbjct: 123 IHSPMSRALIGKKKNDIIKVNTPTGYIKYIIKKIEYI 159 >UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Clostridia RepID=GREA_CLOB8 Length = 160 Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 5/143 (3%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 ++T EG +KL+ EL YL +R E+T+K+ A GD SEN++Y K + R+ Sbjct: 8 VMTYEGVKKLESELEYLKTVKRKEITEKIKIALGYGDLSENSEYDEAKNDQAFTEGRIIQ 67 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEI---ENDDGVTHRFRIVGYDEIFGRKDYISID 121 L L+N +VD S V G+ V++ E D+ V + IVG E IS + Sbjct: 68 LENMLKNAVVVDESEIPSDIVSVGSKVKVKDYEFDEEV--EYSIVGSAEADPMNFKISNE 125 Query: 122 SPMARALLKKEVGDLAVVNTPAG 144 SP+ AL+ K+VGD+ V P G Sbjct: 126 SPVGNALVGKKVGDVVEVTVPDG 148 >UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5K0_9BACT Length = 169 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 80/148 (54%), Gaps = 14/148 (9%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T +G E+L++EL L ++ A L E + + ++ LR + R++ L Sbjct: 32 MTVDGAERLQKELAVLADQK-----------AQL---EETGEGEISRDELRRVTSRMQAL 77 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 ++ L + +++ S + +V FG +V I + GV +RIVG DE+ +IS SP+A Sbjct: 78 SQRLADAEVIAISESRGDEVRFGMFVTIRDAGGVEDEYRIVGVDEVDLEAGWISWLSPLA 137 Query: 126 RALLKKEVGDLAVVNTPAGEASWYVNAI 153 +A++ +++GD+ PAGE ++ A+ Sbjct: 138 QAIVGRKIGDVVQFQAPAGEKKLHIVAV 165 >UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Mycoplasma RepID=GREA_MYCGE Length = 161 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/133 (33%), Positives = 76/133 (57%), Gaps = 3/133 (2%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+EG+++L++EL L + +RPE+ + + A GD SENADY K + EI+ R+ + Sbjct: 8 LTQEGFKQLEKELENLIQVKRPEIIRLLQEARDQGDLSENADYDAAKAQQGEIETRIAEI 67 Query: 66 TKCLENLKIV-DYSPQQE-GKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 L N K++ D+ + + KV G+ VEI + ++ IVG E + IS +S Sbjct: 68 QDILANAKLISDHQAKTKVTKVSLGSTVEIYDYSSKSNEKYTIVGTLEANPEEHKISNES 127 Query: 123 PMARALLKKEVGD 135 P+A A+ + +GD Sbjct: 128 PLALAIYGRLIGD 140 >UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococcus RepID=Q1J0L4_DEIGD Length = 156 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 2/150 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+ GY+KL++ L YL R ++++ + A + GD E+A Y + + E + R+ L Sbjct: 8 MTKRGYDKLRETLEYLKTTRREQISEYMGSAIADGDLRESAAYDEARMQQSENEARILEL 67 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 LE +I++ G GA V++ ++ G +F +VG E+ K IS SP+ Sbjct: 68 EDQLERAQIIEEDAS--GGAGLGAKVKVRDEKGNERQFELVGTYEVDVLKGKISDASPIG 125 Query: 126 RALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +AL K G + V P G A + V + Y Sbjct: 126 QALSGKRPGQIVTVQLPKGSAKFEVLEVTY 155 >UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostridiales RepID=A8SDG2_9FIRM Length = 161 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 1/141 (0%) Query: 10 GYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCL 69 G + +++EL YL R E+ +++ A S GD SEN++Y K ++ R+ L + + Sbjct: 11 GLKAMQEELEYLKTVRRKELAEEIKEARSHGDLSENSEYDEAKNTQGLVENRITELEQTI 70 Query: 70 ENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARAL 128 +N I+D S V G V I E + + IVG E IS +SP+ AL Sbjct: 71 KNAVIIDESELSVDNVSVGTHVTIRETGEDEAEEYDIVGRTEADAFNGKISDESPVGHAL 130 Query: 129 LKKEVGDLAVVNTPAGEASWY 149 + K VGD A V P G+ Y Sbjct: 131 MGKAVGDKAEVLLPTGQTVVY 151 >UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiothermus RepID=C1XQ58_9DEIN Length = 159 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 4/152 (2%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T EG ++L+ EL L +R E+ A GD ENA Y ++ + DRR+ L Sbjct: 9 LTAEGLKRLQDELTTLKTVKRQEIAAAFEQAIEEGDLRENAGYDEARRAQWDNDRRISEL 68 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDE--IFGRKDYISIDSP 123 L +V+ +V G VE+E D G IVG E +F K IS +SP Sbjct: 69 ESILARAVVVEAGNGTPLEVGLGVSVELETDTGARMSLTIVGSHEADVFNGK--ISNESP 126 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 M + L+ K+VGD +P G S+ + + Y Sbjct: 127 MGQRLMGKKVGDRVEYPSPKGVQSYTIVELSY 158 >UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WJ76_9ACTN Length = 161 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 4/141 (2%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 ++T EG +KL++EL++L E+R EV +++ A GD SEN++Y K ++ R+ Sbjct: 12 VLTPEGKQKLEEELHFLETEKRAEVGERIRVAREFGDISENSEYDDAKNEQGLMEARIAQ 71 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR-FRIVGYDEIFGRKDYISIDSP 123 + L N +V+ +P++ +V G+ V + D G R F IVG E IS +SP Sbjct: 72 INDILSNAVLVE-APKRSNRVNIGSTVTV--DMGGRERVFTIVGAAEADVSSGKISNESP 128 Query: 124 MARALLKKEVGDLAVVNTPAG 144 + ALL + GD P G Sbjct: 129 VGAALLGGKKGDHFTAEGPTG 149 >UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachyspira RepID=C0QWD9_BRAHW Length = 154 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 3/146 (2%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M P +T+EGY+K K +L L + E + + A GD ENA+Y K++ ++ Sbjct: 1 MAKP-ITKEGYDKAKSKLADL-KAEFETLPAIIAEAREKGDLKENAEYHAAKEKQGLLNA 58 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYIS 119 ++ L L +I+D + + V FG V++++ +RIVG E K+ I+ Sbjct: 59 QISKLESDLAGCEIIDPANLDKDTVTFGKRVKVKDKSRNAVFEYRIVGELEADMSKNEIT 118 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGE 145 I +P+A+ LL K++GD+ + PAG+ Sbjct: 119 IVTPIAKGLLGKKIGDVVTIKVPAGD 144 >UniRef50_C6UNA6 Putative transcription elongation factor GreA n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UNA6_HODCD Length = 155 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 1/139 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +T GY L +LN+ + ++P + ++ A SLGD SENADYQ ++ + + Sbjct: 1 MAATTLTALGYISLVAQLNWRRQHKKPALKAQLKAARSLGDLSENADYQAARREDKLNEA 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 R+ + + L K+ + + + + V ++ DG F IVG DE + + + Sbjct: 61 RINEILQTLARAKLAP-ARSAANRPSYNSTVVLKRADGKLLAFNIVGDDEAIATEANVGL 119 Query: 121 DSPMARALLKKEVGDLAVV 139 S +AR L K+VGD+ VV Sbjct: 120 SSDVARQCLNKKVGDVVVV 138 >UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6T4_SPHTD Length = 157 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 2/139 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+EG + L+ EL+ L R E+ + + A GD ENA Y K I+ R+R + Sbjct: 8 ITKEGLKALQDELDDLVNRRRVEIAQALQAAREEGDLRENAGYDAAKHDQAFIEGRIREI 67 Query: 66 TKCLENLKIVDYSPQQEGKVF-FGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 L +++D +P + +V G+ V IE DG + IVG E IS +SP Sbjct: 68 EDILRRAEVIDEAPNGDARVVRLGSTVTIEI-DGAQETYTIVGAVEAKPAAGRISNESPF 126 Query: 125 ARALLKKEVGDLAVVNTPA 143 RALL G+ + TPA Sbjct: 127 GRALLGHREGEEVEIQTPA 145 >UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3129D Length = 161 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 1/144 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T +G KLK EL +L E+R EV ++ A GD SENA+Y K ++ + Sbjct: 3 KDVILTPDGLAKLKSELEHLSTEKRREVAARIKEAREFGDISENAEYDDAKNEQAMLESK 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISI 120 + L + L ++D V G+ V++ ++ G + + IVG E + +S Sbjct: 63 IAQLEEKLRAATVIDSRSVGTDVVGIGSSVQVADSQSGKSDTYVIVGSAEANPAERKLSN 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAG 144 +SP+ +AL+ ++ G+ A V P G Sbjct: 123 ESPVGKALIGRKAGETATVQLPNG 146 >UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Thermotogaceae RepID=GREA_PETMO Length = 159 Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 2/143 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +TREGYEKLK+E L + EV +++ A LGD SEN++Y+ K ID R++ + Sbjct: 8 LTREGYEKLKREREELKKRLMGEVAERIKEARELGDLSENSEYEEAKNEQGMIDSRIKEI 67 Query: 66 TKCLENLKIVDYSPQQEGK-VFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L+N +I++ + V G V+I++ F +V E ++ ISI+SP Sbjct: 68 DYILDNAEIIENGGNHDNSTVSLGKKVKIKDYRLNREQEFVLVTPQEANIEENKISIESP 127 Query: 124 MARALLKKEVGDLAVVNTPAGEA 146 + R+LL ++ G++ + T G + Sbjct: 128 IGRSLLGRKKGEVINIKTARGSS 150 >UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8A6_9FIRM Length = 151 Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 1/140 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+EGY+ LK+ELN L R E+++K+ A GD SEN++Y K ++ R++ L Sbjct: 1 MTQEGYDALKKELNELKSVTRGEISEKIRVARGFGDLSENSEYDEAKNEQAVVEARIKKL 60 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSPM 124 L+++KI++ V G+ V+I + D + I E + IS +SP+ Sbjct: 61 EDQLKHVKIIERDQISTDVVSVGSRVKILDMDYDEEMVYTIASSVESHNDLESISDESPV 120 Query: 125 ARALLKKEVGDLAVVNTPAG 144 + L+ +VGD+ ++ PA Sbjct: 121 GKGLIGHKVGDVVEIHAPAA 140 >UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Acholeplasmataceae RepID=GREA_ACHLI Length = 158 Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 8/146 (5%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+ G ++LK EL +L +R E + + A GD SENADY + I+ R+ + Sbjct: 9 LTQSGLDQLKDELTHLKDVKRVENLEALKEAREQGDLSENADYDAARNEQARIEARILEI 68 Query: 66 TKCLENLKIV----DYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 L+N+KI+ D + GK +VE D + +VG E + ISI+ Sbjct: 69 ESILKNVKIIRTNDDSTTVNIGKKVLLHFVEKNKD----VEYHVVGTIEADPKNFKISIE 124 Query: 122 SPMARALLKKEVGDLAVVNTPAGEAS 147 SP+ RA+ KEVGDL + + + S Sbjct: 125 SPLGRAIKGKEVGDLVQIKSATNKQS 150 >UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostridium RepID=B2V1C0_CLOBA Length = 155 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 11/156 (7%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T E +KL++EL Y +R E+ K+ AA+ GDRSENA+Y+ RE D R++YL Sbjct: 5 LTEENMKKLQEELEYRLTVKRAEIAKEKLVAAAHGDRSENAEYKEACANYRENDNRIQYL 64 Query: 66 TKCLENLKIVDYSPQQEGKVFFGA-----WVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 + ++D + + + + +VE +++D +T +V ++ ISI Sbjct: 65 MTMISTATVIDDTEIDKSSLGINSKARIKFVEDDDEDVIT----LVTTMDLDPENMLISI 120 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 +S + +AL+ K+ G+ V P A + V +E + Sbjct: 121 ESDLGKALMGKKAGETVEVEAPG--AKYTVKILEIL 154 >UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Mycoplasma RepID=GREA_MYCAP Length = 163 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 12/144 (8%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 ++ E Y K K E L ERP V + A + GD SENA+Y + R E++RR+ L Sbjct: 11 LSEETYNKYKNEYTELVTVERPAVQASLKEARAQGDLSENAEYDAARDRQSEVERRILEL 70 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDY------IS 119 + LEN +I+D + K GA V N T++ +V I G D IS Sbjct: 71 ERILENAEIIDTKSAVQNKAGIGATVRYLNMK--TNKELVVT---IMGPHDSNPIENKIS 125 Query: 120 IDSPMARALLKKE-VGDLAVVNTP 142 +SP+A+A+++ +GD+ V P Sbjct: 126 NESPVAQAIMEANGIGDVVEVEVP 149 >UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKD0_FIBSS Length = 151 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 7/150 (4%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR-RVR 63 + T+E Y+KL ++L L ERP V +++ A + GD SENA+Y K+RL ID + Sbjct: 1 MFTQEAYDKLVKDLENLKNVERPRVLQELVDARAQGDLSENAEYHAAKERLASIDNIEMP 60 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR---FRIVGYDEIFGRKDYISI 120 L L +++ + + + FGA + +N T R +++V +E IS Sbjct: 61 KLQDQLARAQVIAFDANSD-TIKFGATITAKNLK--TKREIVYQLVSPEEADALNGKISF 117 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYV 150 SP+ AL+ K+ GD V TP G+ + + Sbjct: 118 KSPIGAALMGKKRGDTVEVVTPKGKNQFEI 147 >UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Actinomycetales RepID=D2PP26_9ACTO Length = 169 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 10/146 (6%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T++GY++LK EL +L R E+T++++ A GD EN Y K +I+ R+R L Sbjct: 12 LTQDGYDQLKSELEHLKGPARAEITQRISEARDEGDLKENGGYHAAKDEQGKIEARIRQL 71 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEI--ENDDGVTHRFRIVGYDEIFGRKDYISID-- 121 L + V +P+ +G V G V I DD V F ++G E+ + ID Sbjct: 72 EDMLRRAR-VGETPKDDGVVEPGMKVSITFAGDDDV-ETF-LLGSRELLALDTSVDIDVY 128 Query: 122 ---SPMARALLKKEVGDLAVVNTPAG 144 SP+ A++ K+ GD A P G Sbjct: 129 SPQSPLGAAIMGKKKGDKATYEAPNG 154 >UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDC6_THET1 Length = 159 Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 4/152 (2%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T +G ++L++EL L ER +++ ++ A GD SE+ +Y+ K ++ R++ L Sbjct: 9 LTEQGLKELREELERLRTVERAKISARIREAKEGGDISESGEYEDAKHSQAFLEGRIKEL 68 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIV-GYDEIFGRKDYISIDSPM 124 K L N +++D S Q G V G+ V +E ++G T+ + IV G + GR + I S Sbjct: 69 EKLLANAEVIDRSAQPAGTVGLGSKVTVE-ENGRTYTYTIVDGAEAGRGRDGEVRISSKS 127 Query: 125 A--RALLKKEVGDLAVVNTPAGEASWYVNAIE 154 A ALL + VGD V PAG+ ++ + ++E Sbjct: 128 AVGSALLGRRVGDSVEVEVPAGKLTFKILSVE 159 >UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017427C8 Length = 151 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 4/148 (2%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T G +LK EL L + R E+ +K+ A GD SENA+Y ++ ++ R+ + Sbjct: 7 ITEAGKNELKDELETL-KGRRGEIAEKIAEARDYGDLSENAEYDAAREEQGIVETRIAEI 65 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 L+N I+ + G+V G+ VE+ T + +VG E + +S +SP+ Sbjct: 66 ENILQNAAII--TGGVSGQVGLGSVVELMTGSK-TAVYTVVGPVEADPLEGKVSNESPIG 122 Query: 126 RALLKKEVGDLAVVNTPAGEASWYVNAI 153 AL+ K+V D+ +NTP G+ + + +I Sbjct: 123 AALMGKKVDDIVEINTPKGKLEYKIISI 150 >UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bifidobacterium RepID=A1A150_BIFAA Length = 159 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 6/145 (4%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 KT L+T+E Y+K+K+EL + E R E+ KV+ A + GD SEN YQ ++ R R Sbjct: 5 KTILLTQEAYDKMKEELAWREGEYRDEILSKVSAARAEGDLSENGGYQAAREAQRVNQGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDY--IS 119 + LT L N KI+ + + G+V G+ V +E + ++G ++ DY IS Sbjct: 65 IDELTVKLRNAKIL--TAPKAGEVGDGSLVTLEVNG--REMVYVLGTRDLSIATDYSIIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAG 144 +SP+ A+ GD P G Sbjct: 121 PESPIGAAINGAHAGDTVTYTAPNG 145 >UniRef50_Q0HPS7 GreA/GreB family elongation factor n=4 Tax=Gammaproteobacteria RepID=Q0HPS7_SHESR Length = 56 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 29/49 (59%), Positives = 38/49 (77%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQ 49 MK L+TR+G+ L +EL YLW+E RP++T KV AA+ GDRSENADY+ Sbjct: 1 MKAHLITRQGWMTLDKELKYLWKEYRPQITLKVQEAAAQGDRSENADYR 49 >UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ08_9BACE Length = 157 Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 5/151 (3%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 ++ E +++LK EL YL EV ++ A S GD SEN++Y K ++ R+ + Sbjct: 7 LSPERWKELKDELVYLKTVREKEVADQIKEARSFGDLSENSEYDEAKNEQGKLYSRIAEV 66 Query: 66 TKCLENLKIVDYSPQQEGKVFFGA---WVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 LEN +++ V G+ +++E ++ + + +VG E IS DS Sbjct: 67 ENILENCVVIEEEIHDGKTVRLGSKLKVLDVEFNEELD--YEVVGSQEADPMNGRISEDS 124 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 P RALL K VG+ VV PAG + V +I Sbjct: 125 PFGRALLGKSVGEDVVVEAPAGALHYKVLSI 155 >UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostridium RepID=B9E669_CLOK1 Length = 157 Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 6/147 (4%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ ++T G +KL++EL YL +R E+ + A + GD SENADY K+ + Sbjct: 4 MQDVILTEAGKKKLEEELEYLKTVKRVEIKAALKAARAQGDLSENADYSAAKEDQSMTET 63 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVF---FGAWVEIENDDGVTHRFRIVGYDEIFGRKDY 117 R++ L L+N I++ S E VF A V+ + D V +V E + Sbjct: 64 RIQELEYQLKNAVIIESSL--ETDVFDINRTALVKFYDVDEV-EEVTLVSSVESDVKNMR 120 Query: 118 ISIDSPMARALLKKEVGDLAVVNTPAG 144 ISI+SP+ +AL + +VGD A V +P G Sbjct: 121 ISIESPLGKALFRLKVGDKATVISPDG 147 >UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clostridia RepID=GREA_SYNWW Length = 159 Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T+EG EKL+ EL +L +R EV +++ A + GD +EN++Y+ K I+ R Sbjct: 5 KEVVLTKEGLEKLENELEHLKSVKREEVAERIKQAIAFGDITENSEYEDAKNEQAFIEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISI 120 + L K L+ ++++ + V G+ + + E G +V E + IS Sbjct: 65 IISLEKTLKKARLMEDEDIRTDVVSLGSRITLKEMKSGREVTVTLVSSVESKLKDGKISD 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ +A++ K+V V PAG + + +E Sbjct: 125 ESPVGKAIMGKKVKSTVSVEAPAGTIKYKIIKVE 158 >UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipelotrichaceae RepID=B7CAB2_9FIRM Length = 162 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 6/140 (4%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 VT+EGY L E L + R EV ++ A + GD SENADY ++ +++ R+R L Sbjct: 8 VTQEGYNDLVNEHENLVHKVRQEVIVELQEARAQGDLSENADYDAAREHQAQVEGRIREL 67 Query: 66 TKCLENLKIVDYSPQQEGK-----VFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 ++N +I+ S E K V G+ V+I + D F IVG E +S Sbjct: 68 EAMIKNAEIITESADVEDKKKKNVVKLGSTVKILDLSDNQEVTFNIVGTIEADPFNGKLS 127 Query: 120 IDSPMARALLKKEVGDLAVV 139 +P+A ++ +VGD+ V Sbjct: 128 NTTPLAEVIMDHKVGDVCTV 147 >UniRef50_A4YC68 GreA/GreB family elongation factor n=1 Tax=Shewanella putrefaciens CN-32 RepID=A4YC68_SHEPC Length = 66 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/47 (59%), Positives = 36/47 (76%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENAD 47 MK L+TR+G+ L +EL YLW+E RP++T KV AA+ GDRSENAD Sbjct: 1 MKAHLITRQGWLALDKELKYLWKEYRPQITLKVQEAAAQGDRSENAD 47 >UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9H5_COPPD Length = 163 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 2/148 (1%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 ++T EGY+K+ +EL YL +R EV +K+ A +LGD SEN++++ K+ ++ R+ Sbjct: 8 AILTEEGYKKILEELKYLKEVKRKEVAEKIQEARALGDLSENSEFEAAKEEQALLEERIA 67 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVG-YDEIFGRKDYISID 121 L + N ++V +V G V + ++ G F IVG +E+ IS Sbjct: 68 RLETLVYNARVVKAEDLALDQVSVGTKVLVLDESAGREESFIIVGNSEEVDPFSGKISSK 127 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWY 149 SP+ LL ++ GD + G + Y Sbjct: 128 SPLGSRLLGRKRGDRVEIKLRNGSKAVY 155 >UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobacillus fermentum RepID=D2KXD7_LACFE Length = 303 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 7/127 (5%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T GY +++++ L +++RP + ++ A LGD SEN +Y K+ LR ++ +RYL Sbjct: 20 MTPAGYRAIEEQIEAL-KQKRPTLIARLKAARVLGDLSENTEYSTAKRELRHLESCLRYL 78 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVG---YDEIFGRKDYISID 121 K L K++D S +GKV G V I DD ++IVG ++ ++ ++ D Sbjct: 79 DKQLTYAKVIDVS--DDGKVALGKVVTIRFLDDQEEATYQIVGRYQAEQASLTEEVLAFD 136 Query: 122 SPMARAL 128 SP+ AL Sbjct: 137 SPLGLAL 143 >UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehalococcoides RepID=A5FRA2_DEHSB Length = 266 Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 3/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K P+ T GY+KL+ EL L + +R V +++ AA D ENA Y K++ +I+ R Sbjct: 113 KIPM-TASGYKKLEDELCIL-KVKRIAVIEEMRLAALDKDMRENAPYHAAKEQRGQIEGR 170 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 ++ + L++ ++ +Y+ KV G V++ + +G + +V EI K IS Sbjct: 171 IKEIEHELKHAEVSEYTDNNTSKVNMGNTVKLRDLKNGEQCIYTLVSPKEIEPLKGRISA 230 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ +AL + GD + P+G + + I + Sbjct: 231 SSPIGKALFNRSKGDNIEIEVPSGTLQYVIEDISF 265 >UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Mycoplasma RepID=GREA_MYCPU Length = 157 Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 3/138 (2%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+E +K ++E +L ERP V ++ A GD SENA+Y +++ +I+ R+ L Sbjct: 9 LTQETIKKYEEEKWHLINVERPAVILEIKEARQQGDLSENAEYDAAREKQGQIEDRITEL 68 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSPM 124 L N + K+ G+ V I N G F+IVG + ++ IS +SP+ Sbjct: 69 ENILSNA--ISIQESHSDKIGLGSVVRILNQSTGKERTFKIVGSFDTDPTQNKISYESPL 126 Query: 125 ARALLKKEVGDLAVVNTP 142 A++++ GD+ ++ P Sbjct: 127 AKSIIGFSKGDVVEIDAP 144 >UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0F0_ACIFD Length = 160 Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 2/130 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +++ Y+ L QEL L + R E+ K + A +LGD SEN DY K +++ R+R + Sbjct: 6 ISQATYDALVQELEELTTQGRIEIAKAIEAARALGDLSENGDYHAAKDAQGKMEARIRQI 65 Query: 66 TKCLENLKIVDYS-PQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + L++ ++V P E + + E +D V H + + +E + +S SP+ Sbjct: 66 QQILQSARVVSADLPTDEVRPGVVVGLRYEGEDDVEH-YLVGSIEERHPGLEVVSPTSPL 124 Query: 125 ARALLKKEVG 134 ALL VG Sbjct: 125 GEALLGARVG 134 >UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Dehalococcoides RepID=GREA_DEHE1 Length = 156 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 80/155 (51%), Gaps = 3/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K P+ T GY+KL+ EL+ L + +R +V +++ AA D ENA Y K++ +I+ R Sbjct: 4 KIPM-TASGYKKLEDELSTL-KVKRIDVIEEMRLAAMDKDMRENAPYHAAKEQRGQIEGR 61 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 ++ + L+ + +Y+ KV G+ V++ + +G + +V EI K IS Sbjct: 62 IKEIEHELKYADVSEYTDTNTSKVNMGSTVKLRDPKNGECCTYTLVSPKEIEPLKGKISA 121 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ +A+ + G+ + P+G + + I + Sbjct: 122 SSPIGKAVFNRNKGEQIEIEVPSGTLQYIIEDISF 156 >UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBD2_ELUMP Length = 156 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 2/151 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 ++R+ YEKL+++L L +E + +++ ++ AA GD ENA+Y K R E +++ L Sbjct: 6 LSRKNYEKLREDLTAL-KEIKAKLSLEIGEAAQQGDLRENAEYAAAKSRQEETLVKIQDL 64 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDG-VTHRFRIVGYDEIFGRKDYISIDSPM 124 + L N +I D + + GA V + + + + +VG E K +S+ SP+ Sbjct: 65 EQKLRNAQITDDIQVDKSEARIGATVTVHDISADIDFTYTLVGSMESNPEKGLLSVQSPL 124 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 A ++L K+ G+ P G+ + + +EY Sbjct: 125 AVSILGKKEGEEFEAVLPKGKKMYKLVKLEY 155 >UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Actinomycetales RepID=A0JU41_ARTS2 Length = 164 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 5/141 (3%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+E +++LK EL++L R E+ +K+ A GD EN Y K+ +I+ R+R L Sbjct: 12 LTQEAFDRLKAELDHLSGAGRAEIVQKIEAARQEGDLKENGGYHAAKEEQGKIEARIRQL 71 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDY--ISIDSP 123 T L + V SP +G V G V + G F ++G EI G D S SP Sbjct: 72 TVLLRDAH-VGESPADDGIVEPGMIV-VARIAGDEETF-LLGSREIAGDSDLDVFSEKSP 128 Query: 124 MARALLKKEVGDLAVVNTPAG 144 + A++ + GD P G Sbjct: 129 LGSAIVGHKEGDKLSYTAPNG 149 >UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acidobacteria RepID=Q01RT9_SOLUE Length = 164 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 5/136 (3%) Query: 12 EKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLEN 71 +KL+ E+ L E ++ K++ A GD ENA+Y K R + R+ L L Sbjct: 6 KKLQDEITALEYELHVDLPKEILKARLHGDLKENAEYHAAKDRQGFVSARLGQLKSRLGQ 65 Query: 72 LKIVDYSPQQEGKVFFGAWV---EIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARAL 128 L ++D++ K G+ V ++++D +T + +V +E +S SP+ RAL Sbjct: 66 LAMIDFTKIPRDKAGLGSTVVVLDVKSDQEIT--YHLVTSEEADAPNGKVSTTSPIGRAL 123 Query: 129 LKKEVGDLAVVNTPAG 144 L K VGD V +P G Sbjct: 124 LGKTVGDEVKVMSPGG 139 >UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Borrelia RepID=GREA_BORBU Length = 901 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 1/154 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 L K ++EL YL E PE +K++ A LGD ENA+Y K++ + + +R+ Sbjct: 746 LTILSSLNKKQKELKYLKEVEIPENSKEIGKARELGDLKENAEYHSAKEKQQFLTKRLNS 805 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSP 123 L +EN K++D Q V FG V I N+ G + I+G E + IS SP Sbjct: 806 LMLEIENAKVIDTKDLQSSVVGFGTKVVILNEVTGKDESYLILGPWESNPDEGIISYKSP 865 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 LL GD ++V IE +K Sbjct: 866 FGENLLDSREGDSLNFVINNTNFKYFVKKIEPIK 899 >UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYP5_9BACT Length = 741 Score = 56.2 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 1/141 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 VT+ GYEK K+EL+ + + E + + A S GD ENA+YQ +++ ++ + L Sbjct: 589 VTKHGYEKQKKELDNIMNIQFAENARDLGEAISRGDLRENAEYQAAREKQAQLIEKAERL 648 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDG-VTHRFRIVGYDEIFGRKDYISIDSPM 124 L+ + ++ + V G V I+N D T + ++G + K+ IS SP+ Sbjct: 649 KADLQKIVFIEPYTVKTNIVSPGTKVTIKNKDKETTETYTLLGPWDADIDKNIISYLSPI 708 Query: 125 ARALLKKEVGDLAVVNTPAGE 145 + LL K+ G+ + P E Sbjct: 709 GKGLLNKKTGETVTIQLPENE 729 >UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Corynebacterineae RepID=GREA_RHOE4 Length = 164 Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 10/145 (6%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+E +++LK EL+ L RP + ++ GD EN Y ++ + + R+R L Sbjct: 9 LTQESHDRLKNELDQLIAN-RPVIAAEINERREEGDLKENGGYHAAREEQGQQEARIRQL 67 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEI--ENDDGVTHRFRIVGYDEIFGRKD----YIS 119 + L + K+ + +P Q G G+ V++ + D+ T F I +E G +D S Sbjct: 68 QELLNSAKVGE-APTQSGVALPGSVVKVYYDGDESDTETFLIATREE--GARDAKLEVYS 124 Query: 120 IDSPMARALLKKEVGDLAVVNTPAG 144 +SP+ ALL+ +VGD N P G Sbjct: 125 PNSPLGGALLEAKVGDTREYNLPNG 149 >UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=GREA_MYCA5 Length = 159 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 4/140 (2%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T + +++ ++ L YL RP+V +++ A + GD SENA+Y + + I+ + + Sbjct: 10 LTADSFKQYQERLQYLQEVLRPQVIEEIKEARNQGDLSENAEYDAARDKQATIENEITEI 69 Query: 66 TKCLENLKIV-DYSPQQEGKVFFGAWVEIEN--DDGVTHRFRIVGYDEIFGRKDYISIDS 122 L+N +I+ + +Q V G+ V + + DD V + F+IVG + IS S Sbjct: 70 QHILDNYEIIKTQTNRQVSVVRIGSNVSVVSLKDDTVIN-FQIVGALDTDPFNGKISNTS 128 Query: 123 PMARALLKKEVGDLAVVNTP 142 P+A+A++ ++ G++ V P Sbjct: 129 PLAKAVIGRKAGEVVEVEAP 148 >UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Bacilli RepID=GREA_STRP2 Length = 160 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 7/123 (5%) Query: 26 RPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKV 85 RPEV +++ A S GD SEN++Y+ K ++ ++ L + +IV+ + +V Sbjct: 28 RPEVVERIKIARSYGDLSENSEYEAAKDEQAFVEGQISSLETKIRYAEIVNSDAVAQDEV 87 Query: 86 FFGAWVEI----ENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNT 141 G V I E+++ V G D G+ +S +SP+ +AL+ K+ GD A + T Sbjct: 88 AIGKTVTIQEIGEDEEEVYIIVGSAGADAFAGK---VSNESPIGQALIGKKTGDTATIET 144 Query: 142 PAG 144 P G Sbjct: 145 PVG 147 >UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9C2_9ACTN Length = 156 Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 6/150 (4%) Query: 5 LVTREGYEKLKQELNYLWREE--RPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 ++T EG +KL +EL WRE E+ + + A + GD SEN++Y K + + R+ Sbjct: 7 VLTAEGRQKLVEEL--AWREGDYAKEIVEDIKEARAFGDLSENSEYDAAKDKQAQNAARI 64 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 + L N ++ + + V G+ V + + +G +VG E + IS +S Sbjct: 65 AEIQAILANAQVA--ATTGDLTVSIGSTVSLIDPNGEVMEVTLVGTTETNSLEHKISNES 122 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNA 152 P+ A++ GD V TP+G+ Y A Sbjct: 123 PVGHAIIGHGEGDSVEVVTPSGKTRVYTIA 152 >UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/GreB family n=2 Tax=Aurantimonadaceae RepID=Q1YFK5_MOBAS Length = 158 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 3/110 (2%) Query: 37 ASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVF-FGAWVEIEN 95 A+L +R E A +K + I+R +RY +++ P+ G FG+ V IE Sbjct: 42 AALNERKEAARQADDKIAIANINRDLRYWNARRATAELI--RPRDTGGTAQFGSVVSIER 99 Query: 96 DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGE 145 +DG T +F IVG DE IS SP+AR+L+ + VGD+ T E Sbjct: 100 EDGRTQQFTIVGIDEADPSAGLISYLSPLARSLIGRTVGDIVRAGTADAE 149 >UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cellular organisms RepID=C6B1R3_RHILS Length = 160 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 1/77 (1%) Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 R +RYLT L +++ SP V FG+ V DDG +RIVG DE + IS Sbjct: 71 RDLRYLTARLRTAQLMP-SPTSIDTVAFGSTVTFRRDDGRVQTYRIVGEDEADPKAGSIS 129 Query: 120 IDSPMARALLKKEVGDL 136 SP+AR L+ K VGD+ Sbjct: 130 YVSPVARLLMGKAVGDM 146 >UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betaproteobacteria RepID=B6BTF1_9PROT Length = 164 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 15/150 (10%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 VT G+++LK+ ++ + E + L D EN + NK +L +R +RY Sbjct: 30 VTPNGHKQLKETIHLIETE--------IKSIKELEDSPEN---KQNKMKL---ERDLRYY 75 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 K E ++D ++ KV FGA V + +++ ++F+IVG DE +++ +S SP+A Sbjct: 76 LKRFETAILID-KHEENNKVLFGAHVILIDENDEAYKFQIVGEDEADIKQNKLSYVSPLA 134 Query: 126 RALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + L+ +GD V G ++++I Y Sbjct: 135 KELIGSLIGDEVVWKRADGNRVVFIDSINY 164 >UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verrucomicrobia RepID=B1ZZX3_OPITP Length = 616 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 1/150 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +V++ YE+ ++E + ++ PE +K + A GD EN++Y+ K+ + + Sbjct: 459 IVSKASYERKREEYETIVSKKIPENSKAIAAAREHGDLRENSEYKMAKQEQQVLMAHKTN 518 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + L +I D+ +V G VE+ + DG + ++G + K +IS +P Sbjct: 519 LERDLGRARISDFKDASIDQVSVGTVVEVASVKDGHHTTYTVLGAWDGDPEKHFISYKTP 578 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAI 153 ALL K+ GD+ V T A + + + +I Sbjct: 579 FGAALLGKKTGDVINVKTDASDEDYAIVSI 608 >UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Corynebacterineae RepID=GREA_MYCVP Length = 164 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T E Y++LK EL+ L RP + ++ GD EN Y +++ + + R+R L Sbjct: 9 LTEESYDRLKAELDQLIAN-RPVIAAEINDRREEGDLRENGGYHAAREQQGQEEARIRQL 67 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEI--ENDDGVTHRFRIVGYDEIF--GRKDYISID 121 + L N K+ + +P+Q G G+ V++ ++D+ T F I ++ G+ + S + Sbjct: 68 QELLNNAKVGE-APKQSGIALPGSVVKVYYDDDEKDTETFLIGTREQGVSDGKLEVYSPN 126 Query: 122 SPMARALLKKEVGDLAVVNTPAG 144 SP+ AL+ +VG+ P+G Sbjct: 127 SPLGGALIDAKVGESRSYTVPSG 149 >UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobacter sphaeroides RepID=B9KMW2_RHOSK Length = 164 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 50/97 (51%) Query: 59 DRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYI 118 +R +RYL + + +VD + Q +V FG V +E++ G + I G DE I Sbjct: 66 ERDIRYLEARIASAILVDPAAQPLDEVAFGLAVTVEDEAGRRTVWEITGEDEAQATARRI 125 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + +P+ARAL+ +G+ V PAGE + V I + Sbjct: 126 APQAPLARALMGARLGEKVVWTRPAGEVTLTVTGIAH 162 >UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Mycoplasma RepID=GREA_MYCH7 Length = 160 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 2/132 (1%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 L+T++ E++++EL +L ER V +++ A S GD SENA+Y +++ I+ R+R Sbjct: 10 LLTQQKLEEIEKELEHLINVERVNVIQEIKDARSQGDLSENAEYDVAREKQGIIESRIRE 69 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + KI+ + +V G+ V +EN + G F+IV + K IS SP Sbjct: 70 LETIISKAKII-KADLGSSRVSIGSKVSLENVESGEIQTFQIVSSIDADPFKSKISNFSP 128 Query: 124 MARALLKKEVGD 135 +A+ALL + GD Sbjct: 129 IAQALLGQHQGD 140 >UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK30_9BACT Length = 693 Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 5/148 (3%) Query: 2 KTPLVTRE-GYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 K P VT + Y+ L++E L E P+ +K + A GD EN +++ K R + + Sbjct: 531 KLPQVTSQRSYKALQEEHERLVNTEIPDNSKAIAAAREHGDLRENFEFRAAKDRQKYLQL 590 Query: 61 RVRYLTKCLENLKIVDYSP-QQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 RV L L + D+S + + +V A V I++ + T + IVG + K+++S Sbjct: 591 RVGELDAMLNKIGPTDFSEFKVKNRVIPAAKVTIKSPEAET-TYSIVGMLDGDPDKNWLS 649 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEAS 147 ++P+A+++L +VGD + P G+ + Sbjct: 650 FETPLAKSMLGHQVGD--SIELPGGDEA 675 >UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomycetales RepID=B2GLP4_KOCRD Length = 165 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 7/144 (4%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+E Y++LK+EL+Y+ R E+ ++ A S GD EN Y ++ + + R+ L Sbjct: 9 LTQEAYDRLKKELDYIAGPYRQEIVDRIEQARSEGDLKENGGYHAAREEQGKNEGRIVQL 68 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWV--EIENDDGVTHRF--RIVGYDEIFGRK-DYISI 120 T+ LEN ++ + +P +G + G V EI D+ +T R V D G + S Sbjct: 69 TQLLENAQVGE-APADDGVIEAGMVVTAEIAGDE-MTFLMGSREVAEDLTGGEDLEVFSE 126 Query: 121 DSPMARALLKKEVGDLAVVNTPAG 144 SPM A+ +VG+ P G Sbjct: 127 RSPMGAAINGHKVGETVSYQAPNG 150 >UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9BACT Length = 597 Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 52/104 (50%) Query: 52 KKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEI 111 + L ++R + ++ L+ ++ + +V FGA V +E+D G RF++VG +E Sbjct: 493 RSELATLERELAQVSAVLQGAIVIRLASPPRDEVRFGAEVVVEDDRGSRSRFQLVGENEA 552 Query: 112 FGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + ++ SP+ RAL +G TPAG ++ V I Y Sbjct: 553 APERGLVNWFSPLGRALAGARLGQRVEWTTPAGRGAYVVREISY 596 >UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PP41_CHIPD Length = 157 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 1/149 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 VT+E +++++EL++L + R E+ + + A GD ENA+Y K+ + +V L Sbjct: 7 VTKETLDQMREELSFLKTKGRAEIARAIAEAREKGDLKENAEYDAAKEAQGMHEAKVAIL 66 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + +IV+ KV V I N + T +++V E + + IS+ SP+ Sbjct: 67 ESAIATARIVEADSIDTSKVSILCKVTITNMANKKTVTYQLVSEKEADLKLNKISVTSPI 126 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAI 153 + LL K VG++A V+ P G + + I Sbjct: 127 GKGLLGKAVGEIADVHAPNGSLKFKIENI 155 >UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ureaplasma RepID=GREA_UREP2 Length = 156 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 1/119 (0%) Query: 27 PEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVF 86 P +TK++ A GD SENADY K + +R + + LEN ++++ + +V Sbjct: 27 PAITKQLQDAREQGDLSENADYDAAKNEQAALKKRKDEIEEILENYELIEDVLRSTDEVS 86 Query: 87 FGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAG 144 G+ +EI N +VG + + ISID+P+ +AL+K++ G V+T A Sbjct: 87 IGSTIEIYNYQKDCEEVITLVGSMDSDPFANKISIDTPLGKALVKQKKGTEVTVHTLAS 145 >UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=Firmicutes RepID=GREA_STRPG Length = 160 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 7/123 (5%) Query: 26 RPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKV 85 RPE+ +++ A S GD SEN++Y K ++ ++ L + +I+D + +V Sbjct: 28 RPEIVERIKIARSYGDLSENSEYDAAKDEQAFVEGQISTLETKIRYAEIIDSDAVAKDEV 87 Query: 86 FFGAWVEIENDDGVTHR--FRIVGY--DEIFGRKDYISIDSPMARALLKKEVGDLAVVNT 141 G V I + G T + + IVG +IF K IS +SP+A+AL+ K+ GD + + Sbjct: 88 AIGKTV-IVQEVGTTDKDTYHIVGAAGADIFSGK--ISNESPIAQALIGKKTGDKVRIES 144 Query: 142 PAG 144 PA Sbjct: 145 PAA 147 >UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MF39_PARUW Length = 723 Score = 52.0 bits (123), Expect = 5e-06, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 70/129 (54%) Query: 7 TREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLT 66 T EGY K++ + + E E +++ A +LGD EN+++++ ++R + ++ L+ Sbjct: 575 TEEGYLKIQDRIRQIGTVEVVENAREIEAARALGDLRENSEFKFAQERRARLQSELKTLS 634 Query: 67 KCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMAR 126 + +I+ +V G+ +++ + G R+ I+G + K+ +S++S A+ Sbjct: 635 EQFGRARIITPDDILTDEVGIGSVIDLIDSQGQKIRYSILGPWDADPEKNILSLNSKFAQ 694 Query: 127 ALLKKEVGD 135 A++ K++GD Sbjct: 695 AMIGKKIGD 703 >UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3Z7_9BACT Length = 609 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 1/157 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T +V+ E EK K E + L ++ PE K++ A S GD EN +++ K+ R + RR Sbjct: 452 QTLIVSWESMEKKKAEYDDLVNKKIPENVKEIQVARSYGDLRENFEFKAAKEMQRVLSRR 511 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISI 120 + L + D++ +V G V + E DG T + I+G + K +S Sbjct: 512 RAETERDLAQARGTDFANPDTAQVSVGTIVTLKETGDGRTDVYTILGAWDGDPDKGIVSY 571 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 S +A+AL+ + G+ V T G+ + + IE K Sbjct: 572 QSALAQALIGHKPGEQVNVPTEHGDRTARIEKIEAYK 608 >UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPJ1_9BACE Length = 197 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 8/134 (5%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +TR+ + +++EL+Y RP++ + V A GD SEN +Y+ K+ + R+R+L Sbjct: 35 LTRKDLQMMREELDYRRITLRPQLLEAVKEARGFGDLSENFEYKAAKQEKNRNESRIRFL 94 Query: 66 TKCLENLKIV-DYSPQQEGKVFFGAWVEIENDDGVTHRFRIVG---YDEIFGRKDYISID 121 + ++ D + ++ V +E DD T +++V D + GR IS + Sbjct: 95 ENMIRTAVVISDQAAPDTVGLYDKVTVYLEEDD-ETETYQVVTTMRQDALHGR---ISKE 150 Query: 122 SPMARALLKKEVGD 135 SP+ ALL K VGD Sbjct: 151 SPVGSALLGKRVGD 164 >UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pseudomonas RepID=Q4K5S3_PSEF5 Length = 197 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 1/132 (0%) Query: 13 KLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENL 72 ++ + NY+ + E+ +V S + +K+R+ E++R +RY T+ L + Sbjct: 55 QISAQPNYVTPQGLAELQARVALLHSQHSEQNDLGDDADKQRMAELERDLRYFTQRLHSA 114 Query: 73 KIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKE 132 ++V + KV G+ V ++ ++VG D+ K I+ SP+ RALL + Sbjct: 115 QVVTTA-NSTDKVQIGSRVTFADEQDRQQSVQLVGEDQADAAKGLINWASPLGRALLGAQ 173 Query: 133 VGDLAVVNTPAG 144 GD + PAG Sbjct: 174 PGDEVLWQRPAG 185 >UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax=Alphaproteobacteria RepID=B9J7D6_AGRRK Length = 160 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 R +RYL + + + + +P V FG+ V DDG +RIVG DE + IS Sbjct: 71 RDLRYLAERIRTAQPIP-APASIDIVAFGSTVTFSRDDGRVQTYRIVGEDEADPKTGSIS 129 Query: 120 IDSPMARALLKKEVGDLAVVN 140 SP+A+ L+ K VGD+A V Sbjct: 130 FVSPVAKLLMGKSVGDVASVG 150 >UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QK34_9SPHI Length = 171 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 15/152 (9%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 VT G L+ E L +E T+ L D +E ++L ++ ++ L Sbjct: 31 VTPRGLAMLRDEFEKLEKEHALAQTQ-------LTDENERT------RQLALLNGQIAAL 77 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDG--VTHRFRIVGYDEIFGRKDYISIDSP 123 + + K+V+ +V FGA V + + + IVG DE I+ +P Sbjct: 78 NQRIATAKVVNMQDHPLDEVRFGATVTLSSQSTGKADQQLTIVGVDEADAIHGRIAFPAP 137 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +AR LL K+VGD + TP GE + + +I Y Sbjct: 138 IARLLLGKKVGDFITLRTPRGENALEITSIYY 169 >UniRef50_C7MX98 Transcription elongation factor n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MX98_SACVD Length = 154 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 8/151 (5%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 TP ++ +L++EL L R++R E+ ++ LGD ++ AD + + +DRR Sbjct: 3 STPGLSPATRSRLERELEQL-RKQRAELLPRL-GEDPLGDSADQADLVERSEVVSRLDRR 60 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDY--IS 119 + + L S + EG + G V + DDG +VG D ++ Sbjct: 61 INEVVDLLHG----QISTESEGGLPSGTKVTLRFDDGSVEDMVVVGVAAEADEDDTSTLT 116 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYV 150 DSP+ +AL + GD TP GE + + Sbjct: 117 ADSPLGQALAGHQEGDTVTYRTPKGEVTAEI 147 >UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X3W9_FLAB3 Length = 183 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 16/131 (12%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 VT G E L+QE L E+ +K+ D S +Y+ ++ R++ L Sbjct: 48 VTPAGMEALQQERADLISEQ-----EKL-------DPSHEREYRI---AFNHLNARLQLL 92 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + + KI+D + +G+V FGA V +N ++ + F++VG DE K ++ +P+ Sbjct: 93 NGRMASAKIIDTARLSQGEVHFGATVTFKNLNNNLRQTFQLVGVDEANISKGKLAFTTPL 152 Query: 125 ARALLKKEVGD 135 A+AL+ +VG+ Sbjct: 153 AKALINSKVGE 163 >UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Actinobacteria (class) RepID=GREA_SACEN Length = 162 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 4/141 (2%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T++ +++LK EL+ L RP + K+ A GD EN Y ++ ++ R+R L Sbjct: 9 LTQDAFDRLKSELDELVGN-RPVIAAKINEAREEGDLKENGGYHAAREEQGHLESRIRQL 67 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDE-IFGRKDYISIDSP 123 + L K+ D P + G G+ + + DD T +F + +E G + S SP Sbjct: 68 QELLRTAKVGDV-PTEAGVAKPGSVLTVRYDDEDETEKFLLATREEGAHGDLEVYSPSSP 126 Query: 124 MARALLKKEVGDLAVVNTPAG 144 + +ALL + G+ P G Sbjct: 127 LGQALLDAKEGETREYELPNG 147 >UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia mucilaginosa RepID=D2NP88_9MICC Length = 189 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 15/148 (10%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T++ +++L QEL YL R E+ ++ A GD EN Y + + + R++ L Sbjct: 33 LTQDAFDRLTQELEYLSGPYRQEIVDRIAQARDEGDLRENGGYHAARDEQAKNEARIKQL 92 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYI------- 118 LE I D +P +G V G +E E G T +F ++G EI +D + Sbjct: 93 KHLLETAHIGD-TPADDGVVEHGMVIEAEV-AGRTLKF-LLGSREI---EDTLPAGSDLK 146 Query: 119 --SIDSPMARALLKKEVGDLAVVNTPAG 144 S SP+ A++ + GD P G Sbjct: 147 VFSEKSPLGAAIMGAKQGDEVTYTAPNG 174 >UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bacteroidetes RepID=A3HZU2_9SPHI Length = 166 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 16/151 (10%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 VT G E+L+ E L EE+ +T AA+ ++ +++ I +++ L Sbjct: 31 VTETGMEELQAEKQALI-EEKSNLT-----AATEQEKRIASNF---------ISAKIKLL 75 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + + KIVD S Q + ++ FGA V ++ +++VG DE K+ IS SP+ Sbjct: 76 DERIATAKIVDLSEQPKNEIRFGAKVTLKIGKSPKAMTYQLVGVDEADISKNKISFISPI 135 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 A L+ K+VG+ A ++ G+ + V I+Y Sbjct: 136 AMILIGKKVGEKATLSLTKGDRVFEVMEIKY 166 >UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Treponema RepID=GREA_TREPS Length = 162 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 1/132 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +VT + K+EL L PE ++++ A LGD ENA+Y+ ++ ++ V Sbjct: 8 VVTAKMLNAKKKELQDLLDVRIPENSREIGRALELGDLRENAEYKAAREEQTRLNNMVTR 67 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + +E ++ D + G+V FG + ++N G + I+G E + IS SP Sbjct: 68 LQEEIERAQVFDPTTVVAGRVSFGTVISLKNHTSGEDETYTILGPWESAPERGIISYMSP 127 Query: 124 MARALLKKEVGD 135 + LL ++ G+ Sbjct: 128 LGSNLLNRKTGE 139 >UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Tax=Flavobacteriaceae RepID=A0M1N1_GRAFK Length = 166 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 18/135 (13%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLRE-IDRR 61 T VT G +LKQEL L E R V A+ K+R + ID + Sbjct: 28 TNYVTPNGLAELKQELKDLEYE-RAHV---------------EAENDTEKRRAQSLIDGK 71 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISI 120 + L++ L+ +++D Q + ++ FGA V++ N+ G F+IVG DE +K I+ Sbjct: 72 INLLSERLQTARLLDSKDQPKDEIRFGARVKLTNETSGQLQEFQIVGVDEADIKKKKIAF 131 Query: 121 DSPMARALLKKEVGD 135 +P+A+A+ ++VG+ Sbjct: 132 VAPIAKAVTGRKVGE 146 >UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L6P4_EXISA Length = 152 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 P +T G+ +L L + R ER + +++ A D E+ Y ++ I+ + Sbjct: 3 PKLTETGHHQLTDRL-VMLRRERTDARERLRTARKFCDFREDVTYTEAVRQYERIEADIL 61 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWV---EIENDDGVTHRFRIVGYDEIFGRKDYISI 120 L L++ IV+ S Q E V FG V E++ ++ T R+RIV E + IS+ Sbjct: 62 ELNHLLDDATIVE-SVQSE-VVTFGNRVVIREVQQEE--TERYRIVSEAEADLERGSISV 117 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+ R L+ +G V TP G V IE Sbjct: 118 TSPLGRRLMGATMGQTIQVETPGGTIQVEVLHIE 151 >UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alphaproteobacteria RepID=B0T2S8_CAUSK Length = 161 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Query: 45 NADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFR 104 D ++ + R +RY + + ++ + P + + FG V + +DG FR Sbjct: 55 GGDVAQDRTAMARATRDLRYWSARRASAQLRELDPALD-VLQFGGSVTFDREDGRRQTFR 113 Query: 105 IVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVV 139 IVG DE + +S SP+ARALL K VGD A+V Sbjct: 114 IVGEDEADPTQGSVSYVSPVARALLGKAVGDTAIV 148 >UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax=Deinococcus deserti VCD115 RepID=C1CW74_DEIDV Length = 162 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 17/159 (10%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAAS-------LGDRSENADYQYNKKRLREI 58 +TREGYE+L+Q L +ER + + +T A+ L +RS NA Q ++R+ I Sbjct: 7 LTREGYERLEQSLE----KERQRLEETITSLANTVDDAMDLENRSLNA-AQIGQERI-AI 60 Query: 59 DRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKD- 116 + R+ L L IV+ G+V G+ V +E+D G + ++V EI + Sbjct: 61 EARILELEDVLARAVIVEEEDLPRGQVAVGSVVMLEDDKHGRQLQVQLVSAVEISAMTEG 120 Query: 117 --YISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 +S DSP+ +AL+ + G+ V AG + V ++ Sbjct: 121 VTQVSDDSPVGKALMGRREGETFDVELEAGRVQYTVRSV 159 >UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochrobactrum RepID=A6X2G5_OCHA4 Length = 156 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 61/137 (44%), Gaps = 20/137 (14%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 LVT G ++ E+ L RE L D A+ + + I R +RY Sbjct: 27 LVTPTGLTMIEDEIARLQRE--------------LAD----ANVAGERSAIARISRDLRY 68 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 T EN ++ P + V FG VE+EN DDG R+ IVG DE IS +P Sbjct: 69 WTTRRENAELSVPVPDSD-VVRFGMTVELENLDDGKVRRWTIVGEDEADPSNGKISHVAP 127 Query: 124 MARALLKKEVGDLAVVN 140 +A L K VGD+ +N Sbjct: 128 VAILLFGKPVGDVVKIN 144 >UniRef50_A6NYB0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NYB0_9BACE Length = 163 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 11/121 (9%) Query: 36 AASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN 95 A+++GDRSENA++Q + + L L+ K S GKV G+ +++ Sbjct: 44 ASAMGDRSENAEWQIANDNIARYTVSIMSLVNTLDTYKKFSASYTPTGKVMVGSTLKV-- 101 Query: 96 DDGVTHRFRIVGYDEIF------GRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWY 149 V R Y +I+ + IS +P+ A+L K G +V P G+ +Y Sbjct: 102 ---VDRRHNSTLYIKIYPAGLGNAKIGAISTATPLGSAVLGKTAGTEVIVKAPLGDIPYY 158 Query: 150 V 150 + Sbjct: 159 I 159 >UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh1 n=6 Tax=Thermaceae RepID=Q5SJG6_THET8 Length = 156 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 8/152 (5%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+ GYE+L Q+L RE E TK + D +++ + K+ I+ R+ L Sbjct: 7 LTKAGYERLMQQLER-ERERLQEATKILQELMESSDDYDDSGLEAAKQEKARIEARIDSL 65 Query: 66 TKCLENLKIVDYSPQQEGKVF-FGAWVEIEND-DGVTHRFRIVGYDE--IFGRKDYISID 121 L I++ + G+V G+ VE+E+ G ++V E + IS Sbjct: 66 EDILSRAVILE---EGSGEVIGLGSVVELEDPLSGERLSVQVVSPAEANVLDTPMKISDA 122 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 SPM +ALL VGD+ ++TP G + V AI Sbjct: 123 SPMGKALLGHRVGDVLSLDTPKGRREFRVVAI 154 >UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Chlamydiaceae RepID=GREA_CHLPN Length = 722 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 68/134 (50%) Query: 7 TREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLT 66 T E + ++K +L L +E + K++ A SLGD EN++Y++ ++ + +R L+ Sbjct: 571 TSESFSRMKAKLQSLVGKEMVDNAKEIEDARSLGDLRENSEYKFALEKRARLQEEIRVLS 630 Query: 67 KCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMAR 126 + + +I+ KV G V ++ D G + I+G + +S+ S +A+ Sbjct: 631 EEINRARILTKDLVFTDKVGVGCKVTLKGDAGEVVEYTILGPWDADPDSCILSLQSKLAQ 690 Query: 127 ALLKKEVGDLAVVN 140 +L K++ D+ ++ Sbjct: 691 NMLGKKLNDVVILQ 704 >UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clostridiales RepID=A9KJU6_CLOPH Length = 167 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 69/131 (52%), Gaps = 2/131 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+ +K+++E+ Y R E V A + GD SEN +Y KK + + R+RYL Sbjct: 5 LTKNDIDKMQEEIEYRKLTVRKEAIDAVKEARAHGDLSENFEYYAAKKDKNKNEGRIRYL 64 Query: 66 TKCLENLKIV-DYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + ++ +++ D+S + E + + E D+ + +++++ + ISI+SP+ Sbjct: 65 ERMIKTAEVIEDHSSEDEIGINNTVSIYFEEDNEI-EKYKLITTVRENSLQGLISIESPL 123 Query: 125 ARALLKKEVGD 135 +A+L +V D Sbjct: 124 GKAILGHKVED 134 >UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Firmicutes RepID=C4ZAT8_EUBR3 Length = 167 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 2/131 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T +K++ E+ Y R + V A + GD SEN +Y+ K+ + + R+RYL Sbjct: 5 LTANDIKKMEDEIEYRKLVVRKKALDDVKVARAQGDLSENFEYKAAKQFKNQNESRIRYL 64 Query: 66 TKCLENLKIV-DYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 K ++ ++ D S E +F V E+DD T ++IV K+ IS +SP+ Sbjct: 65 EKMIKTAVVISDESKDDEVGMFNTVDVYFEDDDE-TETYKIVTTVRGNSLKNLISKESPL 123 Query: 125 ARALLKKEVGD 135 A+ +VGD Sbjct: 124 GAAIFGHKVGD 134 >UniRef50_UPI0001B58AC8 GreA/GreB family elongation factor n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B58AC8 Length = 148 Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 3/100 (3%) Query: 45 NADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFR 104 + D Q+ +++ R+ R+R L L+N +V P +G G + + DDG F Sbjct: 32 DGDDQFERRQHRQA--RIRQLQDLLQN-AVVGEDPPDDGIAEPGMVLTVRYDDGGVETFL 88 Query: 105 IVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAG 144 + DE+ G + S DSP+ RAL + G+ P+G Sbjct: 89 LAARDEVGGGLEVYSPDSPLGRALHGAKPGEQREYEVPSG 128 >UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABM5_GEMAT Length = 161 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 16/136 (11%) Query: 12 EKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLEN 71 EKL+ ELN E + A LGD EN++Y+ +R + + R+ LT+ + Sbjct: 14 EKLQFELNVTLPNE-------IRKAVELGDLKENSEYKAALERQQFVQARLGQLTQRVTK 66 Query: 72 LKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFG-----RKDYISIDSPMAR 126 L +D + +V G+ V +E+ Y+ +FG ++++ SP+ R Sbjct: 67 LANIDITQIPGDRVGLGSKVIVEDLQSKARET----YELVFGDAGELHDGHVTMGSPIGR 122 Query: 127 ALLKKEVGDLAVVNTP 142 AL K VG+ A++ P Sbjct: 123 ALQGKSVGEEAILKLP 138 >UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R523_9CHLA Length = 731 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 66/130 (50%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 T EGY + ++ + + E E +++ A SLGD EN++Y++ ++ + ++ L Sbjct: 582 TTEEGYLQTQERIRQIGTTEVVENAREIEAARSLGDLRENSEYKFALEKRSRLQGELKRL 641 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 ++ L +I+ +V G+ VE+E+ + + I+G + + +S S A Sbjct: 642 SEQLNRARIITKDDIYLNQVSVGSIVELEDPEKNVVTYTILGPWDADADTNILSFQSKFA 701 Query: 126 RALLKKEVGD 135 A+L ++VG+ Sbjct: 702 EAMLGRKVGE 711 >UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514 RepID=B9XT30_9BACT Length = 606 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 3/133 (2%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +V+ + E+ K E L +++ P +K++ A S GD EN +Y+ K+ + + RR Sbjct: 451 IVSWDSLERRKNEYAELVQKKIPANSKEIAIARSYGDLRENHEYKAAKEMQKILMRRKAE 510 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIE--NDDGVTHRFRIVGYDEIFGRKDYISIDS 122 L L + DY + V G V++ N + H F I+G + K+ IS + Sbjct: 511 LESELVRARGTDYLNPKTDAVSIGTIVKVTDLNSSHIEH-FNILGAWDSDPEKNVISYLA 569 Query: 123 PMARALLKKEVGD 135 P+A++LL ++ G+ Sbjct: 570 PLAQSLLNRKPGE 582 >UniRef50_B3DVF3 Transcription elongation factor GreA fused to uncharacterized associated domain n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVF3_METI4 Length = 614 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 1/141 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +V+ E E+ K+EL+ L R++ PE +K + A S GD EN +Y+ K+ + RR Sbjct: 454 IVSWESLEQKKKELDELVRKKIPENSKDIAHARSYGDLRENHEYKAAKEMQVVLMRRKAE 513 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + + D+S V G V + T+ I+G + K IS + Sbjct: 514 LESMISRARATDFSNVDTTTVNIGTVVSYTDLKTNRTNSVAILGAWDSNPSKGIISYLAA 573 Query: 124 MARALLKKEVGDLAVVNTPAG 144 ++LL + GD+ V+ G Sbjct: 574 FGQSLLGHKTGDVLQVSLEDG 594 >UniRef50_Q6F8Q7 Fragment of transcription elongation factor (GreB-like) (Part 1) pseudogene n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F8Q7_ACIAD Length = 57 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 49 QYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGA 89 YNKK LREID ++RYLTK E V SP+Q+ K +FG Sbjct: 18 HYNKK-LREIDCKIRYLTKLFEVAHKVKSSPEQDEKAYFGV 57 >UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VBG3_9CLOT Length = 195 Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 8/134 (5%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T +K+++E+ Y R E + V A + GD SEN +Y KK ++R+RYL Sbjct: 35 LTESDIKKMEEEIEYRKVVVRKEKLEAVKEARAQGDLSENFEYYAAKKDKNANEKRIRYL 94 Query: 66 TKCLENLKIV-DYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGY---DEIFGRKDYISID 121 + + +I+ D S E + V E D+ +RIV D + G IS Sbjct: 95 DRMVRTAEIIKDESADDEVGLNNTVRVYFEEDEE-EDTYRIVTTVREDVLNG---IISNI 150 Query: 122 SPMARALLKKEVGD 135 SPM +ALL +VGD Sbjct: 151 SPMGKALLGHKVGD 164 >UniRef50_Q88Q22 Transcription elongation factor, putative n=11 Tax=Pseudomonas RepID=Q88Q22_PSEPK Length = 165 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 1/133 (0%) Query: 13 KLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENL 72 ++ ++ NY+ ++ +V +L + + +K+RL + +R +RY + +++ Sbjct: 22 RISEQPNYVTASGLRQLQTRVAELNALRSELQAQGERGDKQRLADTERDLRYFSARVQSA 81 Query: 73 KIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKE 132 ++V + KV G+ V + ++VG DE I+ SP+ RALL Sbjct: 82 QVVPAATSHS-KVQIGSRVRFVDAQDQEQVVQLVGEDEADAGHGLINWGSPLGRALLGAG 140 Query: 133 VGDLAVVNTPAGE 145 GD V P GE Sbjct: 141 PGDEVVWRRPVGE 153 >UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1G7_DESAP Length = 154 Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 11/103 (10%) Query: 54 RLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIF 112 R+RE+ R R + L + G + +E+ D G + FR+V EI Sbjct: 59 RVRELLARARVVEGQCPPLPLT----------LIGCDIRVEDLDRGHSEMFRVVSPYEIN 108 Query: 113 GRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 ++S SP+ R LL KE G + V P G + V ++ Y Sbjct: 109 PAAGHVSFLSPVGRGLLLKEPGQVLAVQAPGGTFRYRVVSVTY 151 >UniRef50_A2VH02 Transcription elongation factor greA (Transcript cleavage factor greA ) (Fragment) n=1 Tax=Mycobacterium tuberculosis C RepID=A2VH02_MYCTU Length = 110 Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+E +++LK EL+ L RP + ++ GD EN Y ++ + + R+R L Sbjct: 9 LTQESHDRLKAELDQLI-ANRPVIAAEINDRREEGDLRENGGYHAAREEQGQQEARIRQL 67 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEI 93 L N K+ + +P+Q G G+ V++ Sbjct: 68 QDLLSNAKVGE-APKQSGVALPGSVVKV 94 >UniRef50_UPI0001AEE145 nucleoside diphosphate kinase regulator n=1 Tax=Streptomyces albus J1074 RepID=UPI0001AEE145 Length = 160 Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 67/167 (40%), Gaps = 26/167 (15%) Query: 4 PL-VTREGYEKLKQELNYLWREERPEVTKKVTWAASL-------GDRSENADYQYNKKRL 55 PL ++ L+QEL + E + T AA+L GDR + AD L Sbjct: 5 PLPISAAARHALEQELADVRAE-------RETVAATLQDPDIVAGDRGDAADQLQRSGDL 57 Query: 56 REIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRI----VGYDEI 111 +D R+ +T L D P G V G+ V + DDG I GYD Sbjct: 58 ARLDARIEDITTRLRQAD--DAGPPPAGVVGVGSTVTVRFDDGAEQTVSIGEVTQGYDAS 115 Query: 112 FGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 ++ DSP+ +AL+ GD TP GEA V ++ P Sbjct: 116 L-----VTADSPLGKALMGCRPGDAVRYRTPDGEAGAVVVSLGGAPP 157 >UniRef50_B1ZXU0 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXU0_OPITP Length = 204 Score = 38.9 bits (89), Expect = 0.051, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 65/165 (39%), Gaps = 14/165 (8%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 T + R GY ++ E + +R + A S GD EN ++ K+ +R +DR++ Sbjct: 17 TTIYVRPGYNRVLAEEFEALKVKRAALVLDKIEAHSQGDLRENFGFKAAKEAIRAVDRKM 76 Query: 63 RYLTKCLENLKIVDYSP-----QQEGKVFFGAWVEIENDDGVTHR-----FRIVGYDEIF 112 L + + + P + + G IE D T R F + Y E Sbjct: 77 MALDRFVARNTFKEVDPAAWLTKSTDTLQLGHVTTIEKQDVTTKRTHSFTFLVTTYGETA 136 Query: 113 GRKD----YISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 D + SP+A A+L G V PAGE+ + +I Sbjct: 137 SDPDSGLECLPHTSPLATAVLGLAAGAQTKVMLPAGESLLTLISI 181 >UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CMB9_9FLAO Length = 139 Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 46/95 (48%) Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 + ++ L L++ KIVD + Q V F + + + +++G + R ++V E KD IS Sbjct: 33 QSIQKLLTELDSAKIVDEAEMQNDVVRFHSIITVTSENGWSRRVQLVLPPERDVSKDKIS 92 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 I +PM AL GD P+G + +E Sbjct: 93 ILTPMGIALFGYAEGDTVSWEFPSGPKRLRIEKVE 127 >UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deinococci RepID=Q1IZY0_DEIGD Length = 162 Score = 38.5 bits (88), Expect = 0.066, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 7/155 (4%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +TREG+E+L++ L + E T+ + +E+ + K+ I+ R+ L Sbjct: 10 LTREGFERLQRTLAQ-EQARLAEATRILQEQMETSADNEDTGLEDAKREKLNIEARIEEL 68 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDG-VTHRFRIVGYDE---IFGRKDYISID 121 L +++ + G+V GA V + N+ T R ++V E + G IS + Sbjct: 69 EDTLARATLIE-DHENAGRVELGAVVTLNNETTKQTMRVQVVSAPEATVLGGSLPRISEE 127 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWY-VNAIEY 155 SP+ R L+ ++ + VVN G+ Y V IEY Sbjct: 128 SPVGRQLMGRKKDETFVVNLENGKQVKYRVQDIEY 162 >UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1IXC6_DEIGD Length = 158 Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 13/156 (8%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVT-WAASLGDRS--ENADYQYNKKRLREIDRRV 62 +T EGY +L++ L +ER + T AA+L D E+ +Q + L ++ R+ Sbjct: 7 MTAEGYRRLQETLE----KERQRLEDATTSMAATLDDAMDLEDRSFQAAQYDLPTMEARI 62 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRI-----VGYDEIFGRKDY 117 L L IV+ ++G V G+ V + D+ R+ V D + Sbjct: 63 LELEDVLARAVIVEEPQARDGGVALGSVV-VLRDEQHDRELRVQLVSAVEVDALAEGATQ 121 Query: 118 ISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 +S DSP+ +ALL + G+ V+ + A + V +I Sbjct: 122 VSEDSPVGKALLGRRAGESFEVDLGSSRARYTVKSI 157 >UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D4X0_PELTS Length = 150 Score = 38.1 bits (87), Expect = 0.087, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 12/102 (11%) Query: 55 LREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVG--YDEI 111 ++ +DR +R +K KI D + V G+ VEI+N + +++ IV Y E+ Sbjct: 51 IQRLDRLIRNASKS----KIAD---NKVPFVTIGSEVEIQNLSEQEVYKYFIVNPFYSEV 103 Query: 112 FGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 R+ +IS SP+ ++LL K+VGD V P G + + +I Sbjct: 104 --REGHISFLSPVGKSLLLKKVGDEVEVKAPGGVFRYKIKSI 143 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erw... 204 8e-52 UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Pr... 195 3e-49 UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Ga... 191 5e-48 UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=P... 191 8e-48 UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Pro... 188 6e-47 UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Prote... 186 3e-46 UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Ga... 185 4e-46 UniRef50_P64276 Transcription elongation factor greA n=48 Tax=de... 184 1e-45 UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Ga... 183 2e-45 UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Pr... 182 3e-45 UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Pr... 181 7e-45 UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Pr... 181 7e-45 UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=B... 179 2e-44 UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria R... 179 3e-44 UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfob... 178 4e-44 UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cell... 177 1e-43 UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Ba... 177 1e-43 UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Ba... 176 2e-43 UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Ba... 175 3e-43 UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangi... 174 6e-43 UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Des... 174 7e-43 UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Pr... 174 8e-43 UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=c... 174 9e-43 UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myx... 174 1e-42 UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Ri... 172 4e-42 UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Cl... 171 6e-42 UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylob... 171 8e-42 UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Ba... 171 9e-42 UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Pro... 170 1e-41 UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteob... 170 2e-41 UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostrid... 169 2e-41 UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chrom... 169 2e-41 UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Pr... 169 2e-41 UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylob... 169 3e-41 UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bac... 169 4e-41 UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cel... 169 4e-41 UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neo... 168 5e-41 UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultur... 167 7e-41 UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chl... 167 8e-41 UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syn... 167 8e-41 UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clo... 167 1e-40 UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobac... 166 2e-40 UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gam... 166 2e-40 UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrob... 166 2e-40 UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syn... 166 3e-40 UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiother... 166 3e-40 UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Pla... 165 3e-40 UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Sti... 165 5e-40 UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibro... 164 7e-40 UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergis... 164 7e-40 UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Ricketts... 164 7e-40 UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Pro... 164 9e-40 UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus ... 163 1e-39 UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuoke... 163 1e-39 UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pir... 163 2e-39 UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultur... 162 4e-39 UniRef50_UPI00016C498C transcription elongation factor greA n=1 ... 162 4e-39 UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Fi... 162 4e-39 UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Pr... 161 5e-39 UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veill... 161 5e-39 UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerob... 161 6e-39 UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria... 161 6e-39 UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Ba... 161 8e-39 UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 ... 161 9e-39 UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellu... 159 3e-38 UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=The... 158 5e-38 UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicut... 158 5e-38 UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehaloco... 158 6e-38 UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobac... 157 7e-38 UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylob... 157 1e-37 UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotel... 157 1e-37 UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Hal... 155 3e-37 UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostrid... 155 4e-37 UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacter... 155 5e-37 UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Prote... 154 7e-37 UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobac... 153 1e-36 UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=The... 153 1e-36 UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 ... 153 2e-36 UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=De... 152 2e-36 UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococ... 152 4e-36 UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria... 152 4e-36 UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroi... 151 5e-36 UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotr... 151 8e-36 UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 ... 151 9e-36 UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia ... 151 1e-35 UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Deh... 150 1e-35 UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Pr... 150 2e-35 UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctom... 149 2e-35 UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Ba... 149 3e-35 UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia ... 149 3e-35 UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobac... 147 7e-35 UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clo... 147 1e-34 UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 ... 146 2e-34 UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidat... 146 2e-34 UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobac... 146 3e-34 UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Pol... 146 3e-34 UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mol... 145 5e-34 UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntr... 145 6e-34 UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinse... 144 6e-34 UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachysp... 144 7e-34 UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=L... 143 1e-33 UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acido... 143 1e-33 UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Saliniba... 143 2e-33 UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=La... 143 2e-33 UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Myc... 142 3e-33 UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chtho... 142 4e-33 UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipel... 141 5e-33 UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Act... 141 6e-33 UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Bo... 141 6e-33 UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacte... 141 7e-33 UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospi... 141 7e-33 UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Ach... 141 8e-33 UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteri... 141 9e-33 UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Aci... 140 2e-32 UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermoba... 139 2e-32 UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Myc... 139 3e-32 UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Myc... 139 3e-32 UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Myc... 139 4e-32 UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostri... 138 5e-32 UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothe... 138 5e-32 UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinop... 137 7e-32 UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidi... 137 1e-31 UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Ba... 137 1e-31 UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=F... 137 1e-31 UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostrid... 136 2e-31 UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 ... 136 3e-31 UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Th... 135 4e-31 UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 T... 135 5e-31 UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax... 135 5e-31 UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verru... 134 1e-30 UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusi... 134 1e-30 UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methy... 134 1e-30 UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bi... 132 4e-30 UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitu... 132 4e-30 UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Acti... 132 4e-30 UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pse... 131 5e-30 UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxa... 131 8e-30 UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Tre... 131 9e-30 UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Myc... 129 2e-29 UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bactero... 129 2e-29 UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candida... 129 4e-29 UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisp... 128 5e-29 UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia m... 127 9e-29 UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaer... 127 9e-29 UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chtho... 127 1e-28 UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Ch... 127 1e-28 UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachl... 127 1e-28 UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Ac... 125 4e-28 UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh... 124 1e-27 UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Co... 124 1e-27 UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exigu... 123 2e-27 UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9... 123 2e-27 UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bif... 123 2e-27 UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spiro... 123 2e-27 UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodo... 123 2e-27 UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomy... 123 2e-27 UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Co... 122 3e-27 UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Fi... 122 3e-27 UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ur... 119 2e-26 UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB famil... 119 4e-26 UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Fla... 117 1e-25 UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobac... 117 1e-25 UniRef50_C6UNA6 Putative transcription elongation factor GreA n=... 117 1e-25 UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostrid... 116 2e-25 UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clost... 116 2e-25 UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobac... 114 1e-24 UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bac... 112 5e-24 UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cell... 109 3e-23 UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax... 109 4e-23 UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betap... 108 5e-23 UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gem... 106 2e-22 UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Ta... 106 3e-22 UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax... 103 2e-21 UniRef50_C7MX98 Transcription elongation factor n=1 Tax=Saccharo... 100 1e-20 UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/G... 100 1e-20 UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochro... 100 2e-20 UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alph... 97 2e-19 UniRef50_A6NYB0 Putative uncharacterized protein n=1 Tax=Bactero... 87 2e-16 UniRef50_UPI0001B58AC8 GreA/GreB family elongation factor n=1 Ta... 86 3e-16 Sequences not found previously or not previously below threshold: UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostri... 127 2e-28 UniRef50_B3DVF3 Transcription elongation factor GreA fused to un... 124 1e-27 UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacte... 120 2e-26 UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victi... 117 1e-25 UniRef50_UPI0001746370 transcript cleavage factor/unknown domain... 114 7e-25 UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akker... 110 1e-23 UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromon... 109 2e-23 UniRef50_Q88Q22 Transcription elongation factor, putative n=11 T... 106 3e-22 UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococ... 105 4e-22 UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=unc... 105 5e-22 UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deino... 100 2e-20 UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deino... 98 9e-20 UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococ... 96 5e-19 UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, famil... 91 8e-18 UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desul... 87 1e-16 UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacte... 86 3e-16 UniRef50_A2VH02 Transcription elongation factor greA (Transcript... 86 3e-16 UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=... 85 9e-16 UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophag... 84 1e-15 UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphin... 83 3e-15 UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Ter... 82 5e-15 UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candi... 82 7e-15 UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methy... 81 1e-14 UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms Re... 80 2e-14 UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobac... 79 5e-14 UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella... 78 8e-14 UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotom... 78 8e-14 UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Prote... 77 1e-13 UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitu... 77 1e-13 UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=... 77 1e-13 UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein,... 77 2e-13 UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospi... 77 2e-13 UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desul... 77 3e-13 UniRef50_P65095 Uncharacterized protein Rv3788/MT3896 n=17 Tax=M... 76 5e-13 UniRef50_A1TEF4 GreA/GreB family elongation factor n=5 Tax=Actin... 76 5e-13 UniRef50_B1ZXU0 GreA/GreB family elongation factor n=1 Tax=Opitu... 75 6e-13 UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9 T... 75 6e-13 UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Bruc... 75 6e-13 UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavo... 75 8e-13 UniRef50_Q0BS89 Transcription elongation factor greB n=1 Tax=Gra... 74 2e-12 UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Prot... 74 2e-12 UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizo... 74 2e-12 UniRef50_C1YJ21 Transcription elongation factor n=3 Tax=Actinomy... 73 2e-12 UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Prot... 73 3e-12 UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhi... 73 3e-12 UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betap... 73 3e-12 UniRef50_C4DVL0 Transcription elongation factor n=1 Tax=Stackebr... 73 3e-12 UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular... 73 4e-12 UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 T... 72 4e-12 UniRef50_A4T6M8 GreA/GreB family elongation factor n=3 Tax=Mycob... 72 4e-12 UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroi... 72 4e-12 UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitu... 72 4e-12 UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 T... 72 5e-12 UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=... 71 9e-12 UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein,... 71 1e-11 UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltapro... 71 1e-11 UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 T... 71 1e-11 UniRef50_UPI0001B57B91 nucleoside diphosphate kinase regulator n... 71 1e-11 UniRef50_A4FHQ7 Nucleoside diphosphate kinase regulator n=1 Tax=... 71 2e-11 UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein,... 70 2e-11 UniRef50_UPI0001AEE145 nucleoside diphosphate kinase regulator n... 70 3e-11 UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator p... 70 3e-11 UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methy... 69 3e-11 UniRef50_A5VFW5 GreA/GreB family elongation factor n=3 Tax=Sphin... 69 4e-11 UniRef50_D1SYS0 GreA/GreB family elongation factor n=1 Tax=Acido... 69 5e-11 UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteoba... 68 7e-11 UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain... 68 1e-10 UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Brady... 67 1e-10 UniRef50_C0ZE34 Putative uncharacterized protein n=1 Tax=Breviba... 67 2e-10 UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burk... 66 5e-10 UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseud... 65 7e-10 >UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erwinia RepID=D2T9B8_ERWPY Length = 187 Score = 204 bits (519), Expect = 8e-52, Method: Composition-based stats. Identities = 135/156 (86%), Positives = 142/156 (91%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 MKT L+TREGY LKQEL++LWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR Sbjct: 29 MKTKLITREGYNLLKQELDFLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 88 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 RVRYLTKCLE L+IVDYSPQQ+GKVFFGAWVE+ENDDG RFRIVGYDEIFGR DYISI Sbjct: 89 RVRYLTKCLEQLRIVDYSPQQDGKVFFGAWVEVENDDGDIKRFRIVGYDEIFGRNDYISI 148 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 DSPMARALLKKEVGD A V TPAGEA WY+N I YV Sbjct: 149 DSPMARALLKKEVGDAATVFTPAGEALWYINDISYV 184 >UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Proteobacteria RepID=GREB_HAEDU Length = 162 Score = 195 bits (497), Expect = 3e-49, Method: Composition-based stats. Identities = 92/154 (59%), Positives = 122/154 (79%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+ +TR G++ L QEL YLW+EERP+VT+ V+ AA+LGDRSENA+Y Y K+RLREIDRR Sbjct: 3 KSNYITRAGWQALDQELKYLWKEERPKVTQSVSEAAALGDRSENAEYIYGKRRLREIDRR 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 +R+L+K LE L+I+DY PQQ GKVFFGAW+E+EN++G +++RIVG DE K++ISID Sbjct: 63 IRFLSKRLEALQIIDYHPQQAGKVFFGAWIELENNEGEINQYRIVGCDEFDPTKNWISID 122 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ARAL+ K V D V TP G+A +Y+N I Y Sbjct: 123 SPVARALIGKCVDDEIEVQTPTGKAVFYINKIWY 156 >UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Gammaproteobacteria RepID=GREB_PSEPK Length = 162 Score = 191 bits (487), Expect = 5e-48, Method: Composition-based stats. Identities = 117/155 (75%), Positives = 136/155 (87%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M T ++T EG+E LK+EL++LWR RPE+T+KV WAASLGDRSENADYQYNKK LREIDR Sbjct: 1 MSTNIITTEGHEALKKELDHLWRVYRPEITQKVAWAASLGDRSENADYQYNKKLLREIDR 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 RVRYL K LE++K+V YSP+QEGKVFFGAWVEIEND+G T +FRIVGYDEI+GR DYISI Sbjct: 61 RVRYLRKRLEDVKVVAYSPEQEGKVFFGAWVEIENDEGETMKFRIVGYDEIYGRNDYISI 120 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 DSPMARALLKKE GD VV+TP GEA+WYV++I Y Sbjct: 121 DSPMARALLKKEEGDEVVVHTPTGEATWYVSSIRY 155 >UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=Proteobacteria RepID=GREB_YERPE Length = 171 Score = 191 bits (485), Expect = 8e-48, Method: Composition-based stats. Identities = 93/154 (60%), Positives = 117/154 (75%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+ +TREG++ L +EL+YLWREERP VT+ V+ AA++GDRSENA+Y Y KKRLREIDRR Sbjct: 3 KSNYITREGWQALDRELHYLWREERPVVTQAVSEAAAMGDRSENAEYIYGKKRLREIDRR 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 VR+L K LE LKIVD P+QEGKVFFGAWV +EN+ FR+VG DE K +ISID Sbjct: 63 VRFLAKRLEVLKIVDPDPRQEGKVFFGAWVRVENEQEEQRIFRLVGPDEFDPAKKWISID 122 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ARAL+ K+V D V TP GEA++++ I Y Sbjct: 123 SPVARALIGKQVDDEVTVQTPNGEATYWILEIRY 156 >UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Proteobacteria RepID=C5BN87_TERTT Length = 172 Score = 188 bits (478), Expect = 6e-47, Method: Composition-based stats. Identities = 109/155 (70%), Positives = 127/155 (81%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M TPL+T EG KLK EL+YLWR ERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR Sbjct: 17 MSTPLITEEGLTKLKSELDYLWRTERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 76 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 RVRYL K +++LK+V Y+ +QEG V+FG+WV+IEN+ G RIVGYDEIFG K+YISI Sbjct: 77 RVRYLRKRIDSLKVVRYAKEQEGSVYFGSWVKIENEAGENKELRIVGYDEIFGEKNYISI 136 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 DSPMA+ALL+K+VGD A+V T GE W + I Y Sbjct: 137 DSPMAKALLRKKVGDEAIVKTEVGEFCWEIMEISY 171 >UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Proteobacteria RepID=Q1H0G6_METFK Length = 165 Score = 186 bits (472), Expect = 3e-46, Method: Composition-based stats. Identities = 78/159 (49%), Positives = 104/159 (65%), Gaps = 2/159 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T EGY +LK E L++ ERP+V V WAAS GDRSEN DY Y KKRLR+ID R Sbjct: 4 QKNYITPEGYARLKDEFEQLYKVERPKVVSDVAWAASNGDRSENGDYIYGKKRLRQIDSR 63 Query: 62 VRYLTKCLENLKIVDYSPQQE-GKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 +R+L K ++ +VD + QQ+ K++FGAWVE+ + D H +RIVG DE+ K YIS Sbjct: 64 LRFLMKRMDIAVVVDPAQQQDLEKIYFGAWVELYSIDKDSEHHYRIVGQDELDPGKGYIS 123 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 SP+ARALL K+ GD+ V TPAGE + + + Y P Sbjct: 124 WISPLARALLGKQPGDVIRVETPAGEERFEIVDVSYHPP 162 >UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Gammaproteobacteria RepID=GREB_PSEAE Length = 168 Score = 185 bits (471), Expect = 4e-46, Method: Composition-based stats. Identities = 87/155 (56%), Positives = 111/155 (71%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 TPL+T EG +L+ EL+ LW RP+VT+ V+ AA+LGDRSENA+Y Y KK LREID RV Sbjct: 12 TPLITPEGAARLRAELHELWHVRRPQVTQAVSEAAALGDRSENAEYIYGKKMLREIDSRV 71 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 R+L K LENLK+V P +V+FGAWV +E++DG R+RIVG DE+ R + ISIDS Sbjct: 72 RFLRKRLENLKVVGERPADPNRVYFGAWVTLEDEDGEQARYRIVGPDELDLRNNQISIDS 131 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 P+ARAL+ KE+ +V TPAGE W+V IEY Sbjct: 132 PLARALVGKELDAEVLVRTPAGEKLWFVVEIEYPP 166 >UniRef50_P64276 Transcription elongation factor greA n=48 Tax=delta/epsilon subdivisions RepID=GREA_HELPJ Length = 164 Score = 184 bits (467), Expect = 1e-45, Method: Composition-based stats. Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M ++ GY K+ EL L ERP + K++ A GD ENA+Y K++ R I+ Sbjct: 1 MNKEPMSMHGYNKICAELKQLKEVERPNIVKEIDIARGHGDLKENAEYHAAKEKQRFIEA 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R+ L++ + N +++D S KV FG+ ++I N D+ + IVG E K IS Sbjct: 61 RIVDLSEIVANAQVIDPSALAHNKVSFGSTIKILNLDNDKEFSYTIVGSVESDPAKGLIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+A++L+ K GD + P GE+ + + I Y Sbjct: 121 FGSPIAKSLIGKSKGDAVSIQLPNGESDFEILDIYY 156 >UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Gammaproteobacteria RepID=A6W1U9_MARMS Length = 196 Score = 183 bits (465), Expect = 2e-45, Method: Composition-based stats. Identities = 83/154 (53%), Positives = 109/154 (70%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+ +T+EG + L EL YLW+E+RP VT+ V AA+ GDRSENA+Y Y KK+LREIDRR Sbjct: 38 KSAYITQEGAQALLAELKYLWKEKRPAVTETVREAAAQGDRSENAEYIYGKKQLREIDRR 97 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 VRYL K LE +VD P + +VFFGAWV +E++ G +RIVG DE+ YISID Sbjct: 98 VRYLEKRLEVCTVVDRFPSDQERVFFGAWVTLEDEAGNLKEYRIVGPDELDHHSSYISID 157 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ARALLKK+ GD V+ GE ++ ++A+EY Sbjct: 158 SPVARALLKKQEGDEVVIRLAGGEKTYIIDAVEY 191 >UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Proteobacteria RepID=GREA_BAUCH Length = 158 Score = 182 bits (463), Expect = 3e-45, Method: Composition-based stats. Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 2/158 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +T G E+L++ELNYL RPE+ + + A GD ENA+Y +++ + Sbjct: 1 MNQIPMTLRGAEQLREELNYLKNVRRPEIIRNIAEAREYGDLKENAEYHAAREQQGFCEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQ-QEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYI 118 R++ + L + +I+D + GKV FG V ++N + +RIVG DE + + I Sbjct: 61 RIQEIESKLSHAQIIDVTKLFPSGKVVFGVTVSVQNLNINEEQTYRIVGDDEANFKHNLI 120 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 SI SP+AR L+ K+ GD+ ++ TP GE + + IEY+ Sbjct: 121 SISSPIARGLIGKKKGDIVLIKTPRGEVKYQILKIEYL 158 >UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Proteobacteria RepID=GREA_ALHEH Length = 158 Score = 181 bits (460), Expect = 7e-45, Method: Composition-based stats. Identities = 54/157 (34%), Positives = 90/157 (57%), Gaps = 2/157 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +T G EKL++EL L ERP + + + A GD ENA+Y +++ ++ Sbjct: 1 MSKVPLTARGAEKLREELQRLKTVERPRIIQAIAEAREHGDLKENAEYHAAREQQSFVEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQ-EGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYI 118 R++ + L N +++D + +GKV FGA V++ ++D G ++IVG DE ++ + Sbjct: 61 RIQEIEGKLSNAQVIDPAAVNAQGKVIFGATVDLVDEDSGKEVTYQIVGEDEADIKQGLV 120 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 S++SP+ARAL+ KE GDL V P GE + + + Y Sbjct: 121 SVNSPIARALIGKEEGDLVTVQAPGGEREYEIVEVRY 157 >UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Proteobacteria RepID=GREA_GEOLS Length = 158 Score = 181 bits (460), Expect = 7e-45, Method: Composition-based stats. Identities = 55/152 (36%), Positives = 82/152 (53%), Gaps = 1/152 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T+E YE L++EL L REERP+V + + A S GD SENA+Y K R I+ R++ Sbjct: 6 PLTKESYEALQEELKRLIREERPKVIQDIAEARSHGDLSENAEYDAAKNRQGFIEGRIQE 65 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L L +VD + + KV FGA V + + ++IVG DE + IS SP Sbjct: 66 LQGKLARAHVVDLTGLKPDKVVFGATVTLYDTASEEEITYKIVGEDEADIKLGKISCTSP 125 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + +AL+ ++ D V PAG + + I+Y Sbjct: 126 VGKALIGHKLDDSVKVKVPAGTKEYEIIEIKY 157 >UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=Bacteria RepID=GREA_ANASK Length = 166 Score = 179 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 91/158 (57%), Gaps = 1/158 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ +T+ G +LK EL L ERP++ K++ A + GD SENA+Y K++ I+ Sbjct: 1 MQRVPMTKGGLVRLKDELRRLKSVERPKIVKEIAEARAHGDLSENAEYHAAKEKQSHIEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R+ + + + +++D + +V FGA V +E+ + G +RIVG E ++ IS Sbjct: 61 RIAQVEHWIASAEVIDVTKHAGDRVVFGATVSLEDAESGDQVTYRIVGELEADLKQGKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 + SP+ARAL+ + GD VV +P GE + + ++ +V+ Sbjct: 121 VTSPIARALIGRSEGDTVVVRSPGGEKEYEIQSVAFVE 158 >UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria RepID=D0J5N8_COMTE Length = 231 Score = 179 bits (455), Expect = 3e-44, Method: Composition-based stats. Identities = 71/157 (45%), Positives = 98/157 (62%), Gaps = 1/157 (0%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 +T +GY+++K EL L ERP++ + V WAAS GDRSEN DY Y KKRLREIDRR+ Sbjct: 71 KNYITPQGYQRIKDELLDLIDNERPKIVEIVHWAASNGDRSENGDYLYGKKRLREIDRRI 130 Query: 63 RYLTKCLENLKIVDYSPQQ-EGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 R+LTK LE ++VD + +VFFGA V +D+GV I+G DE ++ +S Sbjct: 131 RFLTKRLEIAEVVDPAVHAGSDQVFFGATVSYVDDEGVERTITIMGIDEADSAQNQVSWI 190 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 +P++RALLK VGD + TPAG + + Y +P Sbjct: 191 APVSRALLKARVGDEVALPTPAGVRMLEILDVSYPQP 227 >UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKN0_DESAH Length = 175 Score = 178 bits (453), Expect = 4e-44, Method: Composition-based stats. Identities = 55/150 (36%), Positives = 80/150 (53%), Gaps = 1/150 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T EGY LK+EL L ERP+ K + A + GD SENA++ K R I+ R+ Sbjct: 25 PITIEGYAALKEELQRLKTIERPQNIKAIEIARAHGDLSENAEFDAAKDRQSFIEGRIGE 84 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + + KI+D + + V F + V IEN D G + IVG +E K IS+ SP Sbjct: 85 LGYKIASAKIIDPATVSKDCVRFASRVVIENLDSGEEVEYMIVGQEESDIHKGKISVSSP 144 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAI 153 + ALL K+ GD V+ P G+ ++ + I Sbjct: 145 LGMALLGKQPGDEIVIQAPGGKRNYEIVDI 174 >UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cellular organisms RepID=Q2Y7V5_NITMU Length = 213 Score = 177 bits (450), Expect = 1e-43, Method: Composition-based stats. Identities = 70/156 (44%), Positives = 96/156 (61%), Gaps = 2/156 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T EG+++L E +L ERP+VT V+WAA+ GDRSENADY Y KKRLREIDRR Sbjct: 30 SKNYITPEGHKRLMDEFLWLMNRERPQVTATVSWAAANGDRSENADYIYGKKRLREIDRR 89 Query: 62 VRYLTKCLENLKIVDYS--PQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 +R+LT+ L+ +I+D S + E ++FFGA V N+ G IVG +EI + YIS Sbjct: 90 IRFLTRRLDMAEIIDPSMPREDESRIFFGATVTYINEKGEEKIVSIVGVNEIDTTRGYIS 149 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+AR LLK GD+ ++ P G + + Y Sbjct: 150 WVSPLARTLLKAREGDVVTLHAPGGTEELEILEVRY 185 >UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Bacteria RepID=Q12SN9_SHEDO Length = 166 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 111/156 (71%), Positives = 125/156 (80%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 +KT L+T EG KL ELNYLWRE RPE+TKKV WAASLGDRSENADY+ NK+ LR+ID Sbjct: 7 VKTNLITAEGLAKLTHELNYLWREYRPEITKKVAWAASLGDRSENADYKENKRLLRQIDG 66 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGR-KDYIS 119 RVR+L K +E LK+V Y+ +QEGKVFFGAWVEIEND+GV RFRIVG DEI+G K YIS Sbjct: 67 RVRFLRKRIEALKVVPYAAEQEGKVFFGAWVEIENDEGVKKRFRIVGPDEIYGDAKGYIS 126 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 IDSPMARALLKKEV D A V TP GE WY+N I Y Sbjct: 127 IDSPMARALLKKEVDDDASVLTPTGEQFWYINKIFY 162 >UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Bacteria RepID=GREA_LISW6 Length = 160 Score = 176 bits (446), Expect = 2e-43, Method: Composition-based stats. Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 1/153 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K +T EG KL+ EL L +R EV +++ A S GD SEN++Y K ++ R Sbjct: 5 KVFPMTLEGKAKLENELQELKTVKRKEVVERIKIARSFGDLSENSEYDSAKDEQAFVEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVE-IENDDGVTHRFRIVGYDEIFGRKDYISI 120 + + + N +I+D + G V G V IE DG + IVG E + IS Sbjct: 65 ITTIENMIRNAQIIDAAEAHNGLVTLGNTVTFIELPDGEEETYTIVGSAEADPFEGKISN 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 DSP+A+ LL + G+ + TPAG+ + + I Sbjct: 125 DSPIAKGLLGHKEGEEVTIQTPAGDMNVKIEKI 157 >UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Bacteria RepID=GREA_BRUA1 Length = 157 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 1/157 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ +T G+EKLK+EL + + ERP + + + A + GD SENA+Y K+ + Sbjct: 1 MEKFPMTPRGFEKLKEELRWRQQSERPRIIEAIAEARAHGDLSENAEYHAAKEAQSLNEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR-FRIVGYDEIFGRKDYIS 119 R+ L + +++D S ++ FGA V + ++D + ++IVG E ++ IS Sbjct: 61 RINELEDLVARAEVIDVSKLTGDRIKFGATVTMIDEDTEEEKIYQIVGDQEADVKEGRIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 I SP+ARAL+ K GD VN P G S+ + A+++V Sbjct: 121 ISSPIARALIGKGEGDTIEVNAPGGSRSYEIIALKFV 157 >UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKY5_HALO1 Length = 169 Score = 174 bits (443), Expect = 6e-43, Method: Composition-based stats. Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 1/154 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T G+ +K +L L +RP K + A GD SENADY K+ I+ R+R Sbjct: 6 PMTPSGHAWMKAQLKKLKEVDRPANAKAIEVARGHGDLSENADYDAAKEEQGMIEARIRE 65 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L +++D + +V FGA V +E+ D G + IVG E + IS+ +P Sbjct: 66 YEAKLALSEVIDPTKLSGERVKFGATVTVEDIDTGDEATYTIVGEHEADIKNKRISVTAP 125 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 +ARAL+ K +GD V TP G ++ + ++++ Sbjct: 126 VARALIGKAIGDETQVQTPKGTRAFEIVDVKWLP 159 >UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Desulfovibrionaceae RepID=GREA_DESVH Length = 163 Score = 174 bits (442), Expect = 7e-43, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 91/157 (57%), Gaps = 2/157 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M + ++ EG+++L++EL+ L + ERP V + + A GD SENA Y ++R ++ Sbjct: 1 MSSIPISVEGFKQLEKELDRLKK-ERPGVIQAIKEAREEGDLSENAGYDAARERQGMLEA 59 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R++Y+ + ++D KV FGA V+IE+ + G + ++G DE K IS Sbjct: 60 RIKYIESRMAQFNVIDLDTISGDKVMFGATVKIEDLESGEEKEYTLLGPDEADYAKGSIS 119 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 + SP+ARA+L KE GD VV+ P G+ + + +I ++ Sbjct: 120 VQSPVARAMLGKEEGDEIVVDAPRGKIHYEIVSIRFL 156 >UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Proteobacteria RepID=GREA_SPHWW Length = 158 Score = 174 bits (442), Expect = 8e-43, Method: Composition-based stats. Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 2/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K P++ EG + L +EL L + ERP + + A + GD SENA+Y K+R +I+ Sbjct: 6 KLPML-AEGQKMLTEELARL-KAERPLIIDAIEEARAHGDLSENAEYHAAKERQGQIEAS 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + + L +++D S K+ FGA V + +DD R++IVG E + IS + Sbjct: 64 IADIEDRLSRAQVIDPSMLSGDKIVFGATVTLLDDDEKPVRYQIVGQTEADAKTGKISYN 123 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 SP+ RAL+ K+V D V P+G+ + V+ IE++ Sbjct: 124 SPLGRALIGKKVDDEVEVTVPSGDRFYLVSKIEFI 158 >UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=cellular organisms RepID=GREA_BACCR Length = 158 Score = 174 bits (441), Expect = 9e-43, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 KT +T+EG +KL+ EL L R EV +++ A S GD SEN++Y K ++ R Sbjct: 5 KTYPMTQEGKQKLENELEQLKTVRRKEVVERIKIARSFGDLSENSEYDAAKDEQAFVEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L + N I+ + + V G V + +G + IVG E + IS Sbjct: 65 ITQLENMIRNAVIIKDTGEVSTVVTLGKTVTFKELPNGDEEAYTIVGSAEADPFEGRISN 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 DSP+A++LL K++G+ + TP GE + +++ Sbjct: 125 DSPIAKSLLGKQIGEKVTIQTPGGEMQVEIVSVK 158 >UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myxococcales RepID=A7HDS3_ANADF Length = 169 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 70/157 (44%), Positives = 102/157 (64%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K +T EG+ +L E +W +RP++ +V AA+LGDRSENA+Y Y KK+LRE+DRR Sbjct: 10 KPRYITPEGFRRLASEHERIWSVDRPKIVAEVEAAAALGDRSENAEYVYGKKKLRELDRR 69 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 +R+L++ ++ L +VD P G+ FFGAWV IE+D+G FR+VG DE IS++ Sbjct: 70 LRFLSERMDALTVVDPRPHPHGRAFFGAWVTIEDDEGEARTFRLVGPDEFDVAAGLISVE 129 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 +P+ RALL K+ GD + PAGEA + A+ + P Sbjct: 130 APLGRALLGKQEGDTVLFLRPAGEAELTIMAVRWSPP 166 >UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Rickettsia RepID=GREA_RICCK Length = 162 Score = 172 bits (436), Expect = 4e-42, Method: Composition-based stats. Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 1/152 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T +G++KL+ EL +L ER ++++ + A GD SENA+Y+ +++ I+ R++ Sbjct: 6 PITAKGFKKLEHELKHLKHVERKKISEDIAEAREHGDLSENAEYEAAREKQAFIEGRIKE 65 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTH-RFRIVGYDEIFGRKDYISIDSP 123 L +I+D S + FGA V + +DD + +VG E + +SI SP Sbjct: 66 LEDMAARAEIIDISKLSGDNIKFGATVTLIDDDTEEKVTYIVVGEYEADITRKRVSIASP 125 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +A+AL+ K VGD V TP G S+ V +EY Sbjct: 126 IAKALIGKSVGDFVEVTTPKGSKSYEVVEVEY 157 >UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Clostridia RepID=GREA_CLOB8 Length = 160 Score = 171 bits (435), Expect = 6e-42, Method: Composition-based stats. Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T EG +KL+ EL YL +R E+T+K+ A GD SEN++Y K + R Sbjct: 5 KQYVMTYEGVKKLESELEYLKTVKRKEITEKIKIALGYGDLSENSEYDEAKNDQAFTEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L L+N +VD S V G+ V++++ + + IVG E IS Sbjct: 65 IIQLENMLKNAVVVDESEIPSDIVSVGSKVKVKDYEFDEEVEYSIVGSAEADPMNFKISN 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ AL+ K+VGD+ V P G + + I Sbjct: 125 ESPVGNALVGKKVGDVVEVTVPDGVNKFEILGIS 158 >UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylobacteraceae RepID=D1B0C0_SULD5 Length = 167 Score = 171 bits (433), Expect = 8e-42, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 1/154 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T GY+KL EL+ L + +RPE ++ A S GD ENA+Y K++L ID R+ Sbjct: 6 PMTEYGYKKLTDELSDLKKRQRPETVIELDIARSHGDLKENAEYHAAKEKLAFIDSRIAE 65 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L+ + +++D S + KV FG+ + +EN + + IVG E IS SP Sbjct: 66 LSDLVSRSQVIDPSTYEHDKVRFGSTITLENLETNEEVTYSIVGSTESNPDLGLISYHSP 125 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 +++ L+ + V + ++ P G + + I Y + Sbjct: 126 LSKQLMGRCVDEEVMIKLPVGTQEYAILNITYCE 159 >UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Bacteria RepID=GREB_NEIMA Length = 163 Score = 171 bits (433), Expect = 9e-42, Method: Composition-based stats. Identities = 72/156 (46%), Positives = 96/156 (61%), Gaps = 1/156 (0%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 +T G++ LK EL L +ERPE+ + V WAA GDRSEN DY Y K+R+REIDRR+ Sbjct: 6 KNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGDRSENGDYLYGKRRMREIDRRI 65 Query: 63 RYLTKCLENLKIVDYS-PQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 R+LTK LE +VD + +VFFGA V + DG +IVG DEI ++ IS Sbjct: 66 RFLTKRLEAAVVVDPELREATDQVFFGATVGLLRGDGREQTVKIVGIDEIDTAQNKISWI 125 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 SP+AR L+K GD V+NTP G + ++EY+K Sbjct: 126 SPLARCLIKAREGDEVVLNTPEGREEIEILSVEYIK 161 >UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Proteobacteria RepID=GREA_AZOC5 Length = 157 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 1/157 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ +T G+ L++EL + + ERP + ++ A + GD SENA+Y K+ + Sbjct: 1 MEKIPMTGAGFVALEEELRFRQQVERPRIISAISEARAHGDLSENAEYHAAKELQSLNEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR-FRIVGYDEIFGRKDYIS 119 R+ L + +++D S V FGA V + ++D R ++IVG E + IS Sbjct: 61 RIAELEDKISRAEVIDVSKLSGDIVKFGATVTLVDEDTEEERVWQIVGDSEADAKAGRIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 I SP+ARAL+ K+ G V TP G S+ + + + Sbjct: 121 ISSPVARALIGKKKGSSVEVVTPKGARSFEIVEVRWA 157 >UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteobacteria RepID=A2SJD8_METPP Length = 213 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 71/157 (45%), Positives = 91/157 (57%), Gaps = 1/157 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T G+ +L+ EL L +ERP+V + V+WAA GDRSEN DY Y KKRLREIDRR Sbjct: 54 SKNYITPAGFARLRAELMQLLDDERPKVVETVSWAAKNGDRSENGDYLYGKKRLREIDRR 113 Query: 62 VRYLTKCLENLKIVDYSPQQ-EGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 +R+LTK LE ++ D S + +VFFGA V DGV I G DE + +S Sbjct: 114 IRFLTKRLEIAEVADPSVHRGSDQVFFGATVTYAAPDGVERTITIKGIDEADNLQAEVSW 173 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 SP+ARALLK VGD + TP G + V + Y Sbjct: 174 ISPVARALLKARVGDEVTLLTPQGPQTIEVIEVRYPP 210 >UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostridiales RepID=Q67JL1_SYMTH Length = 157 Score = 169 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 50/154 (32%), Positives = 85/154 (55%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K L++ +G ++L+QEL YL +R EV +++ A GD SEN++Y+ K I+ R Sbjct: 4 KEVLLSLDGLKQLEQELLYLRTVKRMEVAERIKQAREYGDISENSEYEDAKNEQAFIEGR 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L K L N +++D Q+ V G+ V + + + G H + IVG E + IS Sbjct: 64 ILVLEKMLRNARVIDEPVGQQEVVVLGSTVVLRDLEYGDEHTYTIVGTTEADPAHNRISN 123 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ RA++ + VG + V+ P G + + AI+ Sbjct: 124 ESPVGRAIMGQRVGTVVAVDAPDGVFKYEIVAIK 157 >UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUF3_CHRSD Length = 178 Score = 169 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 70/154 (45%), Positives = 101/154 (65%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+ L+T GY +LK +L R +RP ++ KV AA+LGDRSENADY YNKK L + R Sbjct: 21 KSSLITARGYARLKGIHEHLSRVKRPALSTKVGEAAALGDRSENADYTYNKKELNRVIAR 80 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 +RYL K L+ L++VD P +V+FGA+V +E+DDG RIVG+DE K +IS+D Sbjct: 81 IRYLGKRLDELQVVDRLPADTSRVYFGAYVTLEDDDGEEMTIRIVGHDETDTDKRWISVD 140 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +P+A+A+L K + + VN P G+ ++ + I Y Sbjct: 141 APLAQAMLGKGLDEDVTVNAPGGDTTYIITDIAY 174 >UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Proteobacteria RepID=GREB_XANCP Length = 168 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 83/157 (52%), Positives = 107/157 (68%), Gaps = 1/157 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 T L+T EG+ +LK EL+ LWR RPEV + + AA+ GDRSENA+Y Y KK+L EIDRR Sbjct: 11 STALITPEGHARLKAELDELWRLRRPEVVRALAAAAAEGDRSENAEYTYRKKQLGEIDRR 70 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 VRYL+K LE L++VD +P VFFGA VE+E+ D G R+RIVG DE + +ISI Sbjct: 71 VRYLSKRLEALRVVDTAPTDPQAVFFGAQVELEDADSGELLRYRIVGPDETDAGRGWISI 130 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 DSP+ARALLKK V D P+G+ ++ V +EY Sbjct: 131 DSPLARALLKKRVDDEFEAQLPSGKHTFVVVVVEYAA 167 >UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylobacter upsaliensis RM3195 RepID=Q4HT85_CAMUP Length = 161 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ ++ G+EKL EL L +RP V ++ A S GD ENA+Y +++ I+ Sbjct: 1 MEKEAMSSFGFEKLSAELKDLKDNQRPAVVVEIDVARSHGDLKENAEYHAAREKQALIES 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R+ L L +++D + + V FG+ V I + + ++ +VG E K YIS Sbjct: 61 RIAELGGILSRAQVIDPASYEHESVKFGSSVLIMDLESEKESKYTLVGTCESDLEKGYIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 I SP+ARA+L K+ GD V P GE+ + + ++ Y Sbjct: 121 IASPLARAMLGKKEGDEFKVRLPKGESEFEILSVTY 156 >UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bacilli RepID=GREA_OENOB Length = 162 Score = 169 bits (428), Expect = 4e-41, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 2/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 KT +T EG KL+ EL+ L +RP +T ++ A S GD SEN++YQ K ++ R Sbjct: 5 KTYPMTAEGLAKLQAELDDLITNKRPAITSRIQEARSFGDLSENSEYQSAKDEQAFVEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 V+ L + ++ +++D S + V G + + DG + IVG E IS Sbjct: 65 VKQLQQMIQFAQVIDASSASKNVVTLGKKISFKEVPDGDEETYTIVGSAESDPLSGKISN 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIE 154 DSPM +ALL + GD + P + + + Sbjct: 125 DSPMGKALLDHKTGDKVEIPLPENHSVTVEILHVS 159 >UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cellular organisms RepID=Q0BR49_GRABC Length = 169 Score = 169 bits (428), Expect = 4e-41, Method: Composition-based stats. Identities = 68/152 (44%), Positives = 91/152 (59%), Gaps = 1/152 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T G+ ++ EL L REERP++ + V+WAA GDRSEN DY Y KKRLREIDRRVR+ Sbjct: 14 YMTPVGHAQMVAELKQLMREERPKIVEIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRF 73 Query: 65 LTKCLENLKIVDYSPQQ-EGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 LTK LEN ++D + Q + +++FGA V N T + IVG DE IS+ SP Sbjct: 74 LTKRLENAVVIDPATQPHKDRIYFGATVTYINAADETVQVTIVGADEADMALGRISLLSP 133 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +A+ALL GD V TP + ++Y Sbjct: 134 VAKALLGASKGDEVTVITPVKTEILDILDVDY 165 >UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neorickettsia RepID=GREA_NEOSM Length = 159 Score = 168 bits (427), Expect = 5e-41, Method: Composition-based stats. Identities = 53/156 (33%), Positives = 91/156 (58%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ +TREGY KL++EL L + +P V V A LGD SENA+Y +K ++ Sbjct: 1 MRKLPITREGYCKLQEELEKLVKVVKPSVVAAVAQARELGDLSENAEYHEARKEQSFVEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 ++R L CL +++D S +V FGA V +EN + ++IVG E ++ IS Sbjct: 61 KIRELQLCLSEAEVIDVSQFTGERVKFGASVTLENMESKSVLIYQIVGNLESDIKEGKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + SP+ +A++ KEVG++ ++ P+G+ ++ + +E+ Sbjct: 121 VSSPIGKAVMNKEVGEIVEIDLPSGKKTYKILGVEF 156 >UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultured candidate division OP8 bacterium RepID=Q2Z001_9BACT Length = 156 Score = 167 bits (425), Expect = 7e-41, Method: Composition-based stats. Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ +T EG +KL+ EL L +RP K + A GD ENAD++ K I Sbjct: 1 MERYPITPEGLKKLEAELKRLREVDRPANVKAIEEARGHGDLRENADFKCAKDEQAMIVG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R+ YL + + ++D S +V FGA V ++N D G +R+VG DE + IS Sbjct: 61 RIAYLQGRISHAAVIDPSKLSGNRVVFGARVFLKNLDTGEPIVYRLVGEDEADIEQGSIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 I SP+AR L+++EVG+ A + P+G S+ + IE+ Sbjct: 121 ITSPLARGLIRREVGEQAKIAVPSGIKSFEIVKIEF 156 >UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chloroflexi (class) RepID=GREA_CHLAA Length = 157 Score = 167 bits (425), Expect = 8e-41, Method: Composition-based stats. Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K +TREG +L+ EL YL ER ++ +++ A LGD SE+ +Y+ KK ++ R Sbjct: 4 KPTYLTREGRARLEAELEYLTTVERKQIAERIAAAKELGDISESGEYEDAKKAQALLEGR 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISI 120 +R L L +++D G+V G+ V + DDG + IVG E R+ IS Sbjct: 64 IRELKHLLSRAEVIDEDQASNGEVRVGSSVTVRFEDDGTEETWTIVGSAEANPRQGRISN 123 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ ALL K + V+TP+G + + Sbjct: 124 ESPLGAALLGKRARNKVTVHTPSGVMKLTILKVR 157 >UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syntrophus aciditrophicus SB RepID=GREA_SYNAS Length = 161 Score = 167 bits (425), Expect = 8e-41, Method: Composition-based stats. Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 2/159 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ +T+ G+E LK+EL +L P K + A + GD SENA+Y K++ + Sbjct: 1 MEKMPITKSGFENLKKELEHLKCVLIPANIKDIEIARAHGDLSENAEYTAAKEKQSFLHG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYIS 119 +++ L L ++D + ++ FGA V IE G +++VG E ++ IS Sbjct: 61 KLQELENNLALSNVIDLKMLSDDRIVFGATVIIEEASTGKQTNYQLVGPFESNISENKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 + SP+ +AL+ K +GD V+TP G ++ V I Y+ P Sbjct: 121 VTSPIGKALIGKSIGDEVKVHTPGGIRNFEVVDI-YINP 158 >UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clostridiales RepID=GREA_CLOAB Length = 158 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T +G +KL++EL YL +R E+T+K+ A S GD SEN++Y K ++ R Sbjct: 5 KKYVITYKGVKKLEEELEYLKTTKRKEITEKIKVALSFGDLSENSEYDEAKNDQAFVEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISI 120 + + L+N ++D S + V G+ V +++ F IVG E ++ IS Sbjct: 65 IAQIENMLKNANVIDESELKNDVVSVGSKVMVKDYQFDEEIEFSIVGSAEADPIENKISN 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ AL+ K+VGD VN P G + + AI+ Sbjct: 125 ESPVGSALIGKKVGDEIEVNVPDGVDKYKILAIK 158 >UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AU03_RUBXD Length = 154 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 2/151 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T EG+ KL++EL YL R EV +++ A GD SEN++Y K ++RR+ L Sbjct: 1 MTPEGFAKLQEELKYLTEVRRKEVAERIRQAREFGDISENSEYDDAKNEQGLLERRISEL 60 Query: 66 TKCLENLKIVDY-SPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 + L N KIVD S +EG V G V + DG F+IVG +E +S SP Sbjct: 61 QRRLRNAKIVDPASSAEEGAVDLGTRVTLRVVGDGRERTFQIVGANEADPASGKLSHASP 120 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 + +ALL++ VG+ V+TP G + + ++E Sbjct: 121 VGKALLRRRVGEKVRVSTPRGATEYEIVSVE 151 >UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gammaproteobacteria RepID=GREA_VESOH Length = 159 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 2/158 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M VT G + L+ L L RP + + + A + GD ENA+Y K+ ++ Sbjct: 1 MNNIPVTAFGAKALEAALLKLKDVSRPRIIEDIRIARAHGDLKENAEYHAAKEEQSFVEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQ-EGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYI 118 R++ + L ++I+D + +G+ FG + + N D ++IVG DE D I Sbjct: 61 RIKEIELKLSRMQIIDVTKLSQDGRCVFGTTITLMNSVDNSEITYQIVGEDEADISLDKI 120 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 S SP+A AL+ E GD +V P G+ + + ++EY Sbjct: 121 SCHSPIASALMGNEEGDKVIVKAPKGDIVYKILSVEYY 158 >UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrobacter RepID=Q2N9J5_ERYLH Length = 159 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 64/159 (40%), Positives = 91/159 (57%), Gaps = 3/159 (1%) Query: 1 MKTP--LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREI 58 M P +T GY LK + L ERPE+ + V+WAA GDRSEN DY Y +KR+REI Sbjct: 1 MSQPSHPITPGGYAALKARYDRLLGTERPEIVEIVSWAAGNGDRSENGDYIYGRKRMREI 60 Query: 59 DRRVRYLTKCLENLKIVDYSPQQE-GKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDY 117 DR + +L + +++ ++++ S Q + + FFGA + + ++D +VG DE Sbjct: 61 DRELAHLARRMKHARVIEPSEQPDKDRAFFGATLTLADEDDARKTVTLVGDDEQDASAGK 120 Query: 118 ISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 I SP+ARAL VGDL V+ P+GE W V AI Y Sbjct: 121 IGWSSPLARALRGARVGDLRTVHLPSGEREWEVMAIAYA 159 >UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=GREA_SYNFM Length = 156 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 56/155 (36%), Positives = 88/155 (56%), Gaps = 1/155 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +T+EG+E+LK EL L R+ERP V + + A S GD SENA+Y+ K++ I+ Sbjct: 1 MPRVPITKEGFERLKIELQRLQRDERPMVIRAIEEARSHGDISENAEYEAAKEKQAMIEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R++ L + + +IV+ S G+ FG+ V +E+ + G +R+VG E + IS Sbjct: 61 RIQDLCQKMGECEIVEPSDNDNGRAIFGSTVVVEDTETGEVTSYRLVGPYEADVQSGTIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 + SP+ +AL+ KE G+ V TP G + V I Sbjct: 121 VVSPLGKALIGKEEGEEIRVQTPKGVRNIEVLEIR 155 >UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiothermus RepID=C1XQ58_9DEIN Length = 159 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 70/154 (45%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K +T EG ++L+ EL L +R E+ A GD ENA Y ++ + DRR Sbjct: 5 KPVYLTAEGLKRLQDELTTLKTVKRQEIAAAFEQAIEEGDLRENAGYDEARRAQWDNDRR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + L L +V+ +V G VE+E D G IVG E IS + Sbjct: 65 ISELESILARAVVVEAGNGTPLEVGLGVSVELETDTGARMSLTIVGSHEADVFNGKISNE 124 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SPM + L+ K+VGD +P G S+ + + Y Sbjct: 125 SPMGQRLMGKKVGDRVEYPSPKGVQSYTIVELSY 158 >UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Planctomycetaceae RepID=GREA_RHOBA Length = 159 Score = 165 bits (419), Expect = 3e-40, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 +++ +TREGY K+K E+N + EE P + +K+ A GD ENA+Y ++ + Sbjct: 2 VESVPMTREGYNKIKAEINRMENEEMPMIVQKIAEAREEGDLKENAEYHAQRENQGMLMA 61 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYIS 119 ++ L + I+D S + +V FG V +E+ G +F +VG + I Sbjct: 62 KINELRDKIARASIIDVSSLPKDEVVFGCTVTVEDVAYGDEEQFTLVGAGDEDYDSGKIL 121 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + SP + L+ K+VG+ A V+ PAG+ + + IE+ Sbjct: 122 VTSPFGQGLVGKKVGETAEVDVPAGKLKFKILKIEF 157 >UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q096W9_STIAU Length = 144 Score = 165 bits (418), Expect = 5e-40, Method: Composition-based stats. Identities = 71/144 (49%), Positives = 98/144 (68%), Gaps = 1/144 (0%) Query: 14 LKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLK 73 + +EL L ERP+VT +V+ AA+ GDRSENA+Y Y KKRLREIDRR+R+L K L+ Sbjct: 1 MHRELLRLLNVERPKVTAEVSAAAAQGDRSENAEYIYGKKRLREIDRRIRFLQKRLDTAT 60 Query: 74 IVDYSPQ-QEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKE 132 IV + Q +G+V+FGA V +E++DGV ++IVG DEI + IS++SP+ +ALL+K Sbjct: 61 IVTPAEQTDQGRVYFGATVTLEDEDGVQTTYQIVGSDEIDTQGGRISVESPIGKALLRKA 120 Query: 133 VGDLAVVNTPAGEASWYVNAIEYV 156 VGD V P GE + AI Y+ Sbjct: 121 VGDSVEVMRPRGEIELTIVAIAYM 144 >UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNS9_FIBSS Length = 169 Score = 164 bits (417), Expect = 7e-40, Method: Composition-based stats. Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 2/156 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 MK L+++EG+EK K E +L ERP + +V AA+ GDRSENA Y Y + R+REIDR Sbjct: 15 MK-HLISKEGFEKFKAEWEHLKYVERPAMINQVQAAAAEGDRSENAAYTYGRMRVREIDR 73 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR-FRIVGYDEIFGRKDYIS 119 R+R L + L+ +IV+ + ++G + FGA V++ + + + IVG EI + IS Sbjct: 74 RLRELDRILDGAQIVENAATKDGSIRFGATVKMIDKKTKREKIYSIVGDKEIDPLQGRIS 133 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + SP+ AL K+ GD V P G+ + + + Y Sbjct: 134 MKSPIGEALQGKKAGDTVEVQAPRGKIVYEILEVNY 169 >UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergistaceae RepID=D1B632_THEAS Length = 164 Score = 164 bits (417), Expect = 7e-40, Method: Composition-based stats. Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + ++TREGYEKLKQEL L + R E+ K+ A + GD SENA+Y K+ +++ R Sbjct: 9 EQVIMTREGYEKLKQELASLRGDGRSEIASKLEEARAFGDLSENAEYHAAKEEQEKLESR 68 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + +L L K+V+ S V GA V++ + D G T+ + +VG +E + + IS Sbjct: 69 IMWLEYQLSKAKVVESSDIDTSTVSLGATVQLRDLDTGNTYTYVLVGSEEADPKANRISA 128 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+ +A++ + G+ +V P G + I Sbjct: 129 QSPVGKAIIGRAEGEEVIVRVPKGTRHLRIERIS 162 >UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Rickettsiales RepID=B9KH08_ANAMF Length = 174 Score = 164 bits (417), Expect = 7e-40, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 7/158 (4%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +TR G++KL+ EL L ERP++ K ++ A LGD SENA+Y ++R ++ ++ Sbjct: 18 PITRRGFQKLEAELEALKS-ERPKIIKSISDARELGDLSENAEYHAARERQGLVESKIME 76 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEI-----ENDDGVTHRFRIVGYDEIFGRKDYIS 119 L +++D S V FGA V + + D +++IVG E K+ IS Sbjct: 77 LESKRSRAEVIDVSELSGDTVMFGATVTVSVYDEQTDSTGVMQYQIVGEYEADVSKNMIS 136 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEAS-WYVNAIEYV 156 I SP+ +LL + GD V TP G+ + + IE+V Sbjct: 137 IKSPLVLSLLGRREGDSVEVKTPRGDYKIYQIMKIEFV 174 >UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Proteobacteria RepID=B5ZLJ0_GLUDA Length = 180 Score = 164 bits (416), Expect = 9e-40, Method: Composition-based stats. Identities = 72/155 (46%), Positives = 90/155 (58%), Gaps = 1/155 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 VT G ++ ELN L R+ERP + V+WAA GDRSEN DY Y KKRLREIDRRVR+ Sbjct: 22 YVTPAGMAAMRGELNALLRDERPRIVDIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRF 81 Query: 65 LTKCLENLKIVDYSPQ-QEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 LT+ +E +VD + Q + +VFFGA V +D IVG DE +S+ SP Sbjct: 82 LTRRIEKAIVVDPAAQTRRDRVFFGATVTYVTEDDTERTVVIVGVDESDLAAGQVSLASP 141 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 +ARALL VGD + TPAG + I Y P Sbjct: 142 VARALLGGRVGDEVRLLTPAGAEMIEILRIAYPAP 176 >UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus RepID=Q5SKM1_THET8 Length = 155 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 3/157 (1%) Query: 1 MKTP-LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREID 59 MK P +T EGY +L++ELN+L +R E++ A GD ENA Y ++ + + + Sbjct: 1 MKKPVYLTPEGYRRLQEELNHLKTVKRQEISADFEQALEEGDLRENAGYDEARRAMWQNE 60 Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 R+ L L IV+ +V G VE+E + G IVG E IS Sbjct: 61 ARIAQLEDLLSRAVIVENGSF--DQVALGCQVELETETGERLSLAIVGSHEADIFSGKIS 118 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 +SP+ +ALL K+VGD+ + G + + I+ + Sbjct: 119 DESPLGQALLGKKVGDVVEIRGKKGAQVYTILEIKPL 155 >UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ19_9FIRM Length = 156 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 3/154 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T EGY KL ++LNYL +R E+ +++ A +LGD SEN++Y K ++ Sbjct: 4 KQVMLTEEGYNKLVEKLNYLKSVKRIEIAQRLKAAIALGDLSENSEYDDAKNEQAFLEGE 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISI 120 ++ LT + N I+ V G+ V +++ + G F +VG E + IS Sbjct: 64 IQDLTAKIRNSHII--KAGAGDVVQMGSKVTVKDIEFGDEETFMLVGSTEADPDEGKISN 121 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ +ALL ++ G + V+ PAG + + I+ Sbjct: 122 ESPLGQALLGQKSGSVIDVHAPAGIIKYEILDIK 155 >UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R891_9PLAN Length = 164 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 1/152 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +TREGY KLK EL+ + + P++T+K+ A + GD ENA+Y ++ + ++ Sbjct: 6 PMTREGYAKLKAELDRMENVDMPDITQKIADARAEGDLKENAEYHAQREAQGLLQAKINL 65 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 + L I+D S +V FG V +++ D F +VG E I I SP Sbjct: 66 IRNKLSKASIIDPSTMPRDQVSFGTTVLVKDIDMDEEEEFTLVGAGEEDYNAGRILITSP 125 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + +AL+ K++GD+ V P G + +++ Sbjct: 126 LGQALVGKKIGDVVDVPAPKGSYQLEILTLKF 157 >UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H062_UNCTG Length = 158 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 1/154 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +TREG +KL +ELN L + +P + ++ A GD ENA+Y K+ L + R Sbjct: 1 MSEIYLTREGRKKLIKELNELQK-RKPLIQDEIASAREHGDLRENAEYCAAKETLANLIR 59 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 R+ LT + KI++ KVF G V I+++ G +++ IV +E + ISI Sbjct: 60 RIMELTSKIACAKIIEEQNIDSDKVFIGVTVTIKDEYGADYQYAIVDLEEADPVANRISI 119 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+A+ LL G+ V PAG+ + + I Sbjct: 120 QSPLAQGLLGHTAGETVAVELPAGKTKFKILKIS 153 >UniRef50_UPI00016C498C transcription elongation factor greA n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C498C Length = 161 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 1/151 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +TREGY+KLK EL+ L E E+TK+V A LGD SENA+Y ++ + R+ Sbjct: 7 PMTREGYDKLKVELDRLRGAEMIEITKRVAAARDLGDLSENAEYHAAREDQGILQARIDA 66 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSP 123 L+ L IVD S + V FG+ V + + D F +V + K I SP Sbjct: 67 LSDRLSRAVIVDTSNLPKDTVAFGSKVRVLDVDVDEEETFELVSPGQENPDKGRILTGSP 126 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 + + L+ ++ GD + P+G + + I Sbjct: 127 IGQGLIGRKKGDTVEIQVPSGTIKFKILEIS 157 >UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Firmicutes RepID=GREA_LEUCK Length = 160 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 78/155 (50%), Gaps = 2/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K +T EG +KL+ EL L +RPE+T ++ A S GD SEN++YQ K ++ R Sbjct: 5 KVFPMTAEGRDKLQAELEDLITRQRPEITNRIQIARSYGDLSENSEYQSAKDEQAFVEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L K +EN +I+D + V G V + D + IVG E IS Sbjct: 65 ILTLKKMIENAEIIDPNATAADVVSLGKTVTFKELPDEEPETYAIVGSTESDPLAGKISN 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 +S MA ALL K+VGD V P+GE + +E Sbjct: 125 ESAMAVALLDKKVGDKVSVPLPSGESIDVEILKVE 159 >UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Proteobacteria RepID=GREA_PSEPK Length = 160 Score = 161 bits (409), Expect = 5e-39, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 86/154 (55%), Gaps = 2/154 (1%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T +G L++E +L + ERP +++ + A LGD ENA+Y ++ ++ R+R Sbjct: 7 PMTVQGARALEEEHLFLSKTERPRLSQAIGEARELGDLKENAEYHAAREEQGMVEARIRD 66 Query: 65 LTKCLENLKIVDYSPQQ-EGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDS 122 + L+N ++D + GKV FG V + N + ++IVG DE ++ +S + Sbjct: 67 IEGRLQNSVVIDVTTIPHTGKVIFGTTVVLANTETDEEVTYQIVGEDEADVKQGKLSSGA 126 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 P+ARA++ KE GD VV TP+G + + ++++ Sbjct: 127 PIARAIIGKEEGDTVVVKTPSGTVEYEIVEVKHI 160 >UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veillonellaceae RepID=D2RL35_ACIFE Length = 172 Score = 161 bits (409), Expect = 5e-39, Method: Composition-based stats. Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 3/153 (1%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 ++T EG +KL+ EL+YL E+R +V +++ A S GD SEN++Y K ++ R+ Sbjct: 6 ILTEEGLKKLEDELDYLRSEKRQQVAERLKVAISYGDISENSEYDDAKNEQAFVEGRILT 65 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKD--YISID 121 L + N +I+ + + V G V+IE+ + + +VG E + IS + Sbjct: 66 LENMIRNAQIIKDTDITKNVVSLGCKVKIEDMETHDQEEYTVVGTTEADPMAEPPRISNE 125 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+ +A+L ++VG + V TP GE + + A+ Sbjct: 126 SPVGKAILGQKVGAVVKVTTPIGELDYKIVAVS 158 >UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6T4_SPHTD Length = 157 Score = 161 bits (408), Expect = 6e-39, Method: Composition-based stats. Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 2/151 (1%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T+EG + L+ EL+ L R E+ + + A GD ENA Y K I+ R+R Sbjct: 7 PITKEGLKALQDELDDLVNRRRVEIAQALQAAREEGDLRENAGYDAAKHDQAFIEGRIRE 66 Query: 65 LTKCLENLKIVDYSPQQEGK-VFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 + L +++D +P + + V G+ V IE DG + IVG E IS +SP Sbjct: 67 IEDILRRAEVIDEAPNGDARVVRLGSTVTIE-IDGAQETYTIVGAVEAKPAAGRISNESP 125 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 RALL G+ + TPA + +E Sbjct: 126 FGRALLGHREGEEVEIQTPAAVLHARIVNVE 156 >UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria RepID=A3ESJ0_9BACT Length = 160 Score = 161 bits (408), Expect = 6e-39, Method: Composition-based stats. Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +T+ GYEKLK+EL L EERP+ + + A + GD SENA+Y K+R I+ Sbjct: 1 MNQVPMTKAGYEKLKEELEKLKHEERPKNIQDIAEARAHGDLSENAEYHAAKERQGFINS 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYIS 119 R++ L + + +V + Q ++ FGA V + D R+ +VG +E + IS Sbjct: 61 RIKELEAKIASAIVVSSAHQDHSRITFGATVRLVPLDSKEEKRYTLVGQEEADLKAGRIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + SP+ +AL+ G+ + PAGE + + I Y Sbjct: 121 VHSPVGKALIGHSEGETVTIRVPAGEVQYTIAEIFY 156 >UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Bacteria RepID=GREA_CHLCH Length = 160 Score = 161 bits (408), Expect = 8e-39, Method: Composition-based stats. Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 3/156 (1%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T +GY +LK+EL L + R EV +K+ A + GD SENA+Y ++ +I+ R+ Sbjct: 6 YLTNDGYNRLKEELYVLVHQTRKEVLEKIAEARAHGDLSENAEYDAAREEQSQIEARIGD 65 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD--GVTHRFRIVGYDEIFGRKDYISIDS 122 L L I+D + KV+ V++ N D + +V +E IS+ S Sbjct: 66 LESKLSAATILDPKQIKTDKVYILTSVKLRNLDNPDEIIEYTLVSSEEADTDAGKISVRS 125 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 P+ R+L+ K VG + P GE + + I +VKP Sbjct: 126 PVGRSLIGKTVGAKVTIVVPKGELHYEILEI-FVKP 160 >UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3129D Length = 161 Score = 161 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 2/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T +G KLK EL +L E+R EV ++ A GD SENA+Y K ++ + Sbjct: 3 KDVILTPDGLAKLKSELEHLSTEKRREVAARIKEAREFGDISENAEYDDAKNEQAMLESK 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L + L ++D V G+ V++ + G + + IVG E + +S Sbjct: 63 IAQLEEKLRAATVIDSRSVGTDVVGIGSSVQVADSQSGKSDTYVIVGSAEANPAERKLSN 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 +SP+ +AL+ ++ G+ A V P G+ + I+ Sbjct: 123 ESPVGKALIGRKAGETATVQLPNGKQRELRITKID 157 >UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellular organisms RepID=Q2G8D8_NOVAD Length = 182 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 1/154 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T G+ L+ ++L ERP + + V+WAA GDRSEN DY Y +KR+REIDR + + Sbjct: 28 PITPAGFAALRARYDHLLGTERPAIVEIVSWAAGNGDRSENGDYLYGRKRMREIDRELAF 87 Query: 65 LTKCLENLKIVDYS-PQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + ++ ++VD + + +V FGA VEI ++D +VG DE K I +P Sbjct: 88 LARRMKASRVVDPARQEDRSRVLFGATVEIADEDDNRKVLTLVGDDEQDASKGLIGWSAP 147 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 +A+AL VGDL +V P+G+ W + AI Y + Sbjct: 148 IAKALRGSRVGDLRIVRLPSGQKEWEIMAISYPE 181 >UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=GREA_THERP Length = 156 Score = 158 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 2/151 (1%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +TREG E L+QE YL + RPE+ + + A GD ENA Y K I+ R+R Sbjct: 7 PITREGLEALRQEYEYLVKHRRPEIARVIQEAREHGDIRENAAYDAAKHDQAFIEGRIRE 66 Query: 65 LTKCLENLKIVD-YSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 + + L+ +++++ + V G+ V IE DG + IVG E IS +SP Sbjct: 67 IEELLKRVELIEQPTDGDRSVVRVGSTVTIE-IDGEIETYTIVGAIEAKPSAGRISNESP 125 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 + RALL G++ + TP G + ++ Sbjct: 126 VGRALLGHRAGEIVPIETPNGTLMARIIEVQ 156 >UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicutes RepID=C4Z9L9_EUBR3 Length = 185 Score = 158 bits (400), Expect = 5e-38, Method: Composition-based stats. Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T G +KL+ EL L +R EV++K+ A GD SENA+Y K R+I+ R Sbjct: 27 KKNILTYAGLKKLEDELEQLKVVKRKEVSQKIKEAREQGDLSENAEYDAAKDEQRDIEAR 86 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + + K L+N ++V K+ G + I + + ++IVG E K IS Sbjct: 87 IEEIEKILKNAEVVVEEEVDLDKISIGCKIRILDCEFDEELEYKIVGSTEANSLKGKISN 146 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ +ALL K+VGD V T GE ++ V I+ Sbjct: 147 ESPVGKALLGKKVGDTVTVETQVGELTYKVLEIQ 180 >UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehalococcoides RepID=A5FRA2_DEHSB Length = 266 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 2/156 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 ++ +T GY+KL+ EL L + +R V +++ AA D ENA Y K++ +I+ Sbjct: 111 VEKIPMTASGYKKLEDELCIL-KVKRIAVIEEMRLAALDKDMRENAPYHAAKEQRGQIEG 169 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R++ + L++ ++ +Y+ KV G V++ + +G + +V EI K IS Sbjct: 170 RIKEIEHELKHAEVSEYTDNNTSKVNMGNTVKLRDLKNGEQCIYTLVSPKEIEPLKGRIS 229 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ +AL + GD + P+G + + I + Sbjct: 230 ASSPIGKALFNRSKGDNIEIEVPSGTLQYVIEDISF 265 >UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobacteriaceae RepID=C8W826_ATOPD Length = 159 Score = 157 bits (399), Expect = 7e-38, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 1/153 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T EG +KL EL Y E+ E+ +++ A GD SEN++Y K+ + R Sbjct: 5 KEIVLTPEGRQKLVDELAYREGEKHDEIVERIKEARGFGDLSENSEYDAAKEEQSHNESR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + + + L K+V+ +++ V G VE+ + G T ++ IVG E + IS + Sbjct: 65 INEIRQILSVAKVVEGGSKRKVTVAIGTTVELADAKGKTTKYVIVGTTETNSLEHKISNE 124 Query: 122 SPMARALLKKEVGDLAVVNTPAGE-ASWYVNAI 153 SP AL+ + GD TP G+ + + +I Sbjct: 125 SPAGEALIGHKKGDEVEFTTPNGKVKKYTIISI 157 >UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylobacterales RepID=Q30T56_SULDN Length = 174 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 2/156 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ P+ + EGY+ L +E +L E+P+ ++ AA+LGDRSENADYQ K++LR ID+ Sbjct: 1 MQEPM-SIEGYDVLIEEFKFLLEVEKPKTAQEKLVAAALGDRSENADYQAAKEKLRHIDK 59 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R+ YL ++ I+D S KV FG+ V I + + + I G E IS Sbjct: 60 RLFYLNAMIQKAHIIDPSTLLHTKVSFGSSVRILDLESDKEEVYTICGVLESEPENGLIS 119 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 I SP+A+ +L K V D + P + + + I Y Sbjct: 120 IHSPLAQVMLGKRVSDEFKIQLPLMKKEYEILEIYY 155 >UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotella copri DSM 18205 RepID=D1PEW3_9BACT Length = 154 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 1/151 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +++EGY++L EL ++ E P V + A GD SEN +Y K+ ++ R+ + Sbjct: 3 YMSQEGYDELVAELQHMVNVELPAVRDAIAEARDKGDLSENFEYHAAKREQGKLLSRISF 62 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 K LEN +++D S + V + ++I N + + + IV E ISI SP Sbjct: 63 KQKVLENARVIDKSRLKSDTVGLLSKIKITNLANKCSMNYTIVNPHEADLHSGKISIKSP 122 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +A+ALL K+ G+ +V PAG + ++++E Sbjct: 123 IAKALLGKKAGEEVMVKVPAGLLKFRLDSVE 153 >UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZQ0_HALNC Length = 175 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 69/161 (42%), Positives = 97/161 (60%), Gaps = 5/161 (3%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M T +++ G+ +L EL+ LWR ER V + V+ AA+LGDRSENA+Y Y K+RLREIDR Sbjct: 1 MSTAVISARGHARLLAELDQLWRVERRLVVQAVSEAAALGDRSENAEYIYGKRRLREIDR 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 R+RYL K L ++K+V P KV+FGA + + D +VG DEI ISI Sbjct: 61 RIRYLQKRLGDIKVVRQPPTDMNKVYFGARITLLYADDREQTVCLVGPDEIDPANQLISI 120 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEAS-----WYVNAIEYV 156 DSP+A+A+L K + V+ P+ ++ + AIEY Sbjct: 121 DSPLAKAVLGKALDAEVVLFLPSETSTPRRVHAEIIAIEYP 161 >UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostridiales RepID=A8SDG2_9FIRM Length = 161 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 2/156 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + ++ G + +++EL YL R E+ +++ A S GD SEN++Y K ++ R Sbjct: 3 QEIKMSAAGLKAMQEELEYLKTVRRKELAEEIKEARSHGDLSENSEYDEAKNTQGLVENR 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISI 120 + L + ++N I+D S V G V I E + + IVG E IS Sbjct: 63 ITELEQTIKNAVIIDESELSVDNVSVGTHVTIRETGEDEAEEYDIVGRTEADAFNGKISD 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIEY 155 +SP+ AL+ K VGD A V P G + V AI + Sbjct: 123 ESPVGHALMGKAVGDKAEVLLPTGQTVVYTVLAITH 158 >UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYY1_9FIRM Length = 158 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 2/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T +T++G E+ ++E + L R EV ++ A + GD SEN++Y K E++ R Sbjct: 3 ETVFLTQKGLEEKQKEYDELVGVRRKEVADRIKEATAYGDLSENSEYDAAKNEQAELEER 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISI 120 + L L N +I+D + + V G V ++N +RIVG E + IS Sbjct: 63 ISVLEDMLNNYEIIDSNAAKGDVVDLGLNVHLKNITKKKEETYRIVGSAEADPFNNLISN 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 +SP+ + LLK +VG+ ++ P+G+ + + I Sbjct: 123 ESPIGKGLLKHKVGETVSIDIPSGKTVKYKILKIS 157 >UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Proteobacteria RepID=Q1H282_METFK Length = 165 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 52/152 (34%), Positives = 81/152 (53%), Gaps = 14/152 (9%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 VT G++ L+Q+ + L +E +P +K D ++RL IDR +R Sbjct: 28 NYVTPHGFKLLQQQASALEQERQPLTMRK--------------DDPAVQQRLAMIDRDLR 73 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 YL LE+ +VD + Q V FGA VE+E+++G +H F IVG DE + +S SP Sbjct: 74 YLQARLESAIVVDPATQPTDTVLFGATVEVEDENGNSHTFMIVGEDEADIATNRVSWVSP 133 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +A+AL+ +++GD + PAG + AI Y Sbjct: 134 LAKALIGQKIGDSVTWHRPAGNLELEIIAIHY 165 >UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03RN4_LACBA Length = 132 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 66/131 (50%) Query: 24 EERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEG 83 +RP+V ++ A S GD SEN++Y+ K ++ R+ + + L+ +I+D + Sbjct: 2 VQRPKVIDRIKIARSYGDLSENSEYESAKDEQSMLETRISTVERMLQYAQIIDNDDTDKD 61 Query: 84 KVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPA 143 ++ G V + DD + IVG E IS DSP+A+ LL VG+ TP Sbjct: 62 EITVGKKVTFQEDDDEPEEYTIVGAAEADPMSGKISNDSPIAKGLLGHRVGETVTFPTPG 121 Query: 144 GEASWYVNAIE 154 G+ + V A++ Sbjct: 122 GDMTVKVIAVD 132 >UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=Thermomicrobia (class) RepID=B9KZF4_THERP Length = 156 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 81/150 (54%), Gaps = 1/150 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 ++T EG L+QEL +L + + P + +++ ++ GD S+N++Y+ K+ L + R+R Sbjct: 8 VLTPEGKAALEQELEHLRQHKLPLLLERLQQLSNEGDISDNSEYEDTKEELVLTEARIRE 67 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + L +++ + + +V G+ V + +++G + IV +E + ISI+SP+ Sbjct: 68 IEHILRRAQMITRA-GPQDEVRLGSRVTVIDEEGSVETWVIVSPEEANAAQGRISIESPV 126 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 ALL K VG V P GE + + IE Sbjct: 127 GAALLGKRVGTTVTVRAPGGEMRFTIQRIE 156 >UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37CEA Length = 156 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 1/155 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M ++RE Y+KL ELN L +R EV +++ A S GD SENA+Y K ++ Sbjct: 1 MAVKQMSRESYDKLVAELNDLIINKRKEVAERLKVARSYGDLSENAEYDEAKNEQAILEA 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 + L ++N +IVD S ++ + + I+ D G F IV + R+ IS Sbjct: 61 HIAELQYTIDNAEIVDDSNISVDEIGMSSKITIKRLDTGKIETFTIVSTNHANVREGKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+ +A +KK VGD+ +V+ PAGE + V I Sbjct: 121 DASPIGKAAMKKRVGDVFIVDAPAGELKFEVVEIS 155 >UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=Desulfovibrionales RepID=GREA_DESMR Length = 164 Score = 152 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 1/133 (0%) Query: 27 PEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVF 86 P V + A GD ENA Y+ ++R ++ R+ Y+ + ++D + +V Sbjct: 26 PGVILAIKEAREEGDLRENAGYEAARERQGMLEARINYIESRMSRFNVIDLATLGGEQVI 85 Query: 87 FGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGE 145 FGA VEIE+ D G ++ ++G DE K IS+ SP+ ALL K VGD VV+ P G+ Sbjct: 86 FGATVEIEDVDTGDVKKYTLLGPDEAEPSKGSISLLSPVGLALLGKFVGDEIVVDAPRGK 145 Query: 146 ASWYVNAIEYVKP 158 ++ + +I + P Sbjct: 146 INYEIVSIAFHGP 158 >UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococcus RepID=Q1J0L4_DEIGD Length = 156 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 2/151 (1%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T+ GY+KL++ L YL R ++++ + A + GD E+A Y + + E + R+ Sbjct: 7 PMTKRGYDKLRETLEYLKTTRREQISEYMGSAIADGDLRESAAYDEARMQQSENEARILE 66 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 L LE +I++ G GA V++ ++ G +F +VG E+ K IS SP+ Sbjct: 67 LEDQLERAQIIEEDA--SGGAGLGAKVKVRDEKGNERQFELVGTYEVDVLKGKISDASPI 124 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +AL K G + V P G A + V + Y Sbjct: 125 GQALSGKRPGQIVTVQLPKGSAKFEVLEVTY 155 >UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria RepID=B0N6V6_9FIRM Length = 161 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 4/157 (2%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + L+T+ G EKL+QE + L ERP+V +++ A S GD SENADY +++ ++ R Sbjct: 4 EKVLLTQSGVEKLEQERDNLINVERPKVIEELQLARSQGDLSENADYDAAREKQAHLESR 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN---DDGVTHRFRIVGYDEIFGRKDYI 118 ++ + L+N +++ V G V I + D ++IVGY E I Sbjct: 64 IKEIDYMLQNAEVISEEQMDLKVVKPGTTVTILDLSEKDAEPESYQIVGYTETDPLNGKI 123 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 S +SP+A+A+L V ++ V + IE+ Sbjct: 124 SNESPLAKAVLGHGVNEIVTVGVAD-PYDVKIVNIEF 159 >UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ08_9BACE Length = 157 Score = 151 bits (383), Expect = 5e-36, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++ E +++LK EL YL EV ++ A S GD SEN++Y K ++ R Sbjct: 3 KEFKLSPERWKELKDELVYLKTVREKEVADQIKEARSFGDLSENSEYDEAKNEQGKLYSR 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISI 120 + + LEN +++ V G+ +++ + + + +VG E IS Sbjct: 63 IAEVENILENCVVIEEEIHDGKTVRLGSKLKVLDVEFNEELDYEVVGSQEADPMNGRISE 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 DSP RALL K VG+ VV PAG + V +I Sbjct: 123 DSPFGRALLGKSVGEDVVVEAPAGALHYKVLSIS 156 >UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8A6_9FIRM Length = 151 Score = 151 bits (382), Expect = 8e-36, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 1/149 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+EGY+ LK+ELN L R E+++K+ A GD SEN++Y K ++ R++ L Sbjct: 1 MTQEGYDALKKELNELKSVTRGEISEKIRVARGFGDLSENSEYDEAKNEQAVVEARIKKL 60 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSPM 124 L+++KI++ V G+ V+I + D + I E + IS +SP+ Sbjct: 61 EDQLKHVKIIERDQISTDVVSVGSRVKILDMDYDEEMVYTIASSVESHNDLESISDESPV 120 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAI 153 + L+ +VGD+ ++ PA + I Sbjct: 121 GKGLIGHKVGDVVEIHAPAAVLKLKILEI 149 >UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017427C8 Length = 151 Score = 151 bits (381), Expect = 9e-36, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 4/153 (2%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K +T G +LK EL L R E+ +K+ A GD SENA+Y ++ ++ R Sbjct: 3 KVYQITEAGKNELKDELETLKG-RRGEIAEKIAEARDYGDLSENAEYDAAREEQGIVETR 61 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + + L+N I+ + G+V G+ VE+ T + +VG E + +S + Sbjct: 62 IAEIENILQNAAII--TGGVSGQVGLGSVVELMTGS-KTAVYTVVGPVEADPLEGKVSNE 118 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+ AL+ K+V D+ +NTP G+ + + +I+ Sbjct: 119 SPIGAALMGKKVDDIVEINTPKGKLEYKIISIK 151 >UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WJ76_9ACTN Length = 161 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 3/154 (1%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 ++T EG +KL++EL++L E+R EV +++ A GD SEN++Y K ++ R+ Sbjct: 10 EIVLTPEGKQKLEEELHFLETEKRAEVGERIRVAREFGDISENSEYDDAKNEQGLMEARI 69 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 + L N +V+ +P++ +V G+ V + + G F IVG E IS +S Sbjct: 70 AQINDILSNAVLVE-APKRSNRVNIGSTVTV-DMGGRERVFTIVGAAEADVSSGKISNES 127 Query: 123 PMARALLKKEVGDLAVVNTPAGE-ASWYVNAIEY 155 P+ ALL + GD P G + IE+ Sbjct: 128 PVGAALLGGKKGDHFTAEGPTGRVIEMDIVKIEH 161 >UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Dehalococcoides RepID=GREA_DEHE1 Length = 156 Score = 150 bits (379), Expect = 1e-35, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 80/156 (51%), Gaps = 2/156 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 ++ +T GY+KL+ EL+ L + +R +V +++ AA D ENA Y K++ +I+ Sbjct: 2 VEKIPMTASGYKKLEDELSTL-KVKRIDVIEEMRLAAMDKDMRENAPYHAAKEQRGQIEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R++ + L+ + +Y+ KV G+ V++ + +G + +V EI K IS Sbjct: 61 RIKEIEHELKYADVSEYTDTNTSKVNMGSTVKLRDPKNGECCTYTLVSPKEIEPLKGKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ +A+ + G+ + P+G + + I + Sbjct: 121 ASSPIGKAVFNRNKGEQIEIEVPSGTLQYIIEDISF 156 >UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Proteobacteria RepID=GREA_BUCCC Length = 159 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 2/156 (1%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 +T G+ KLK EL L RP + K + A LGD ENA+Y ++ + R+ Sbjct: 4 KIPMTLRGFNKLKSELKKLKYITRPCIVKAIANARQLGDLKENAEYHSAREEQSFCENRI 63 Query: 63 RYLTKCLENLKIVDYSPQQ-EGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISI 120 + L +I+D + +G V FG+ V + + + IVG DE ++ ISI Sbjct: 64 CEIENKLLRAQIIDITKIPFKGIVIFGSTVTVLQISTSNIFVYTIVGDDEANYKEFSISI 123 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 SPM+RAL+ K+ D+ VNTP G + + IEY+ Sbjct: 124 HSPMSRALIGKKKNDIIKVNTPTGYIKYIIKKIEYI 159 >UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZBG3_PLALI Length = 160 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 3/160 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ ++REGY+KLK+E+ L ++ P++ + + A + GD ENA+Y ++ + Sbjct: 1 MELQPISREGYDKLKEEIRKLEHDDMPKIAEAIAEARAEGDLKENAEYHGQREEQGRLQA 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKD--Y 117 R+ L L + IVD S +G V FG V ++N DDG ++ VG E D Sbjct: 61 RINSLKSKLASCYIVDKSTLPKGVVAFGTRVTVKNTDDGDIEKYEFVGPGEEDYMSDVMK 120 Query: 118 ISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 I SP+A ALL K+V D + P G ++ + IE + Sbjct: 121 ILTTSPLASALLGKKVNDKVSIQVPRGTINYEITEIEELA 160 >UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Bacteroidetes RepID=GREA_FLAPJ Length = 158 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 1/148 (0%) Query: 7 TREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLT 66 T EG +KLK EL L ERP+ + + A GD SENA+Y K+ ++ +++ + Sbjct: 8 TAEGLKKLKDELEQLKAIERPKASADIAEARDKGDLSENAEYDAAKEAQGLLELKIKKME 67 Query: 67 KCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 + N +++D S K + V+I+N +G+ + +V E + IS+ SP+ Sbjct: 68 EVYSNARLIDESQLDVSKALVLSHVKIKNQSNGMEMSYHLVAESEADLKTGKISVTSPIG 127 Query: 126 RALLKKEVGDLAVVNTPAGEASWYVNAI 153 + LL K VG++A + P G + V I Sbjct: 128 KGLLGKSVGEIAEITVPNGILKFEVLEI 155 >UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N7T1_SLAHD Length = 155 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 3/152 (1%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 ++T EG EKL+ EL YL E+R EV +++ A GD SEN++Y K ++ R+ Sbjct: 6 VLTPEGKEKLEAELLYLENEKRAEVGERIKIAREFGDISENSEYDDAKNEQGMLEVRIAQ 65 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + L N +V+ +P++ +V G+ V + + G F IVG E + IS DSP+ Sbjct: 66 INDILANATVVE-APKRSNRVTVGSTVTV-DMGGRERVFTIVGGAEANAAEGKISNDSPV 123 Query: 125 ARALLKKEVGDLAVVNTPAG-EASWYVNAIEY 155 LL + GD P G + V IE+ Sbjct: 124 GSVLLGSKKGDQLTTEGPTGRKIEITVLNIEH 155 >UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKD0_FIBSS Length = 151 Score = 147 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 3/150 (2%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR-RVR 63 + T+E Y+KL ++L L ERP V +++ A + GD SENA+Y K+RL ID + Sbjct: 1 MFTQEAYDKLVKDLENLKNVERPRVLQELVDARAQGDLSENAEYHAAKERLASIDNIEMP 60 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDS 122 L L +++ + + FGA + +N +++V +E IS S Sbjct: 61 KLQDQLARAQVIAFDANS-DTIKFGATITAKNLKTKREIVYQLVSPEEADALNGKISFKS 119 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNA 152 P+ AL+ K+ GD V TP G+ + + Sbjct: 120 PIGAALMGKKRGDTVEVVTPKGKNQFEIID 149 >UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clostridia RepID=GREA_SYNWW Length = 159 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T+EG EKL+ EL +L +R EV +++ A + GD +EN++Y+ K I+ R Sbjct: 5 KEVVLTKEGLEKLENELEHLKSVKREEVAERIKQAIAFGDITENSEYEDAKNEQAFIEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L K L+ ++++ + V G+ + ++ G +V E + IS Sbjct: 65 IISLEKTLKKARLMEDEDIRTDVVSLGSRITLKEMKSGREVTVTLVSSVESKLKDGKISD 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ +A++ K+V V PAG + + +E Sbjct: 125 ESPVGKAIMGKKVKSTVSVEAPAGTIKYKIIKVE 158 >UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31C12 Length = 154 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 2/148 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+EG + L+ EL L R E+ ++ A GD ENA+Y K+ ++ R+ L Sbjct: 7 ITQEGLDALRAELEQLETVARREIAARIRTAREWGDLKENAEYHAAKEDQAHLETRILKL 66 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 + N + + S V FG+ VE+E G R+ +VG E R +SI+SP+A Sbjct: 67 RERERNATVTEASS-DVDIVAFGSTVEVETG-GKNARYTLVGAAEASARDGKLSIESPVA 124 Query: 126 RALLKKEVGDLAVVNTPAGEASWYVNAI 153 RAL+ G+ V TP+G V + Sbjct: 125 RALIGARAGEDVQVQTPSGARILRVVRV 152 >UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYP5_9BACT Length = 741 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 1/153 (0%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 VT+ GYEK K+EL+ + + E + + A S GD ENA+YQ +++ ++ + Sbjct: 586 KIYVTKHGYEKQKKELDNIMNIQFAENARDLGEAISRGDLRENAEYQAAREKQAQLIEKA 645 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGV-THRFRIVGYDEIFGRKDYISID 121 L L+ + ++ + V G V I+N D T + ++G + K+ IS Sbjct: 646 ERLKADLQKIVFIEPYTVKTNIVSPGTKVTIKNKDKETTETYTLLGPWDADIDKNIISYL 705 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+ + LL K+ G+ + P E + IE Sbjct: 706 SPIGKGLLNKKTGETVTIQLPENEIVCDIIKIE 738 >UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobacillus rhamnosus RepID=C7T958_LACRG Length = 165 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 54/154 (35%), Positives = 78/154 (50%), Gaps = 4/154 (2%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T G LKQE+ L RP K + AA+LGDRSENA+Y K+ LR+++ R+RYL Sbjct: 7 ITPAGLANLKQEVADLKAI-RPAKIKNLAEAAALGDRSENAEYSAAKRELRQLEGRLRYL 65 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 K + K+ +P G WV +E +DD + +VG E ++I+SP+ Sbjct: 66 DKLIRYAKV--TTPAAANLADIGNWVTLEFDDDQDEDTYELVGPAEAGMGAAKLAINSPL 123 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 A+ + VGD V P+G V AI P Sbjct: 124 GAAVRRHHVGDTVTVTAPSGTYQVTVMAISPHAP 157 >UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Polynucleobacter necessarius RepID=B1XUH7_POLNS Length = 168 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 70/164 (42%), Positives = 92/164 (56%), Gaps = 9/164 (5%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T GYE++K EL L +R EV K V WAAS GDRSEN DY Y KKRLREIDRR Sbjct: 3 EKNYITLAGYERIKTELLQLLNLDRLEVVKVVHWAASNGDRSENGDYIYGKKRLREIDRR 62 Query: 62 VRYLTKCLENLKIVDYS-----PQQEGKVFFGAWVEIEN----DDGVTHRFRIVGYDEIF 112 +R+L K LE +VD S +VFFGA V + G IVG DE+ Sbjct: 63 IRFLNKRLEFAIVVDNSARKSGENDADQVFFGASVTYSALEGPEAGKRTSITIVGVDEVD 122 Query: 113 GRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 K ++S SP+A+AL+K +GD + TP G + ++Y+ Sbjct: 123 LDKSHVSWVSPIAKALIKSRIGDCVFIQTPTGPTEIEILDVQYL 166 >UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mollicutes RepID=GREA_MYCCT Length = 157 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T+EG E+LK EL L RP+V +++ A + GD SENADY + R E++ R Sbjct: 3 KEIILTQEGLEELKAELKNLLEVTRPKVIEELVEARNQGDLSENADYDAARNRQAEVEAR 62 Query: 62 VRYLTKCLENLKIVDYS-PQQEGKVFFGAWVE-IENDDGVTHRFRIVGYDEIFGRKDYIS 119 ++ + + K++D S G+V G+ VE + + D T +IVG E IS Sbjct: 63 IKEVETLINRAKVIDNSKTHSTGEVKIGSTVEFLSSLDHKTKEIKIVGAIEADPFSRLIS 122 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+A+A+L K++GD + + +I+ Sbjct: 123 NESPIAKAILGKKIGDTVEIKDILKPYKITIKSIK 157 >UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LES5_SYNFM Length = 155 Score = 145 bits (366), Expect = 6e-34, Method: Composition-based stats. Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 2/154 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 MK P +TR GY +L +EL +L RPEV +++ A + G + EN Y ++R + + Sbjct: 1 MKVP-ITRLGYHRLLRELFFLRHVVRPEVIEELQEARTGGIKIENQQYMLARERHMVLQK 59 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 +++ L + L + +IV + FG V I+N + G T R+++VG E +S Sbjct: 60 KIQDLERKLASCEIVVGRKFFFKQAEFGTIVVIQNIETGETQRYQLVGPYESNVVDGKLS 119 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 IDSP+ R L+ + G+ +V TPAG + V +I Sbjct: 120 IDSPVGRHLVGRREGEEVLVYTPAGVRMYRVVSI 153 >UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9C2_9ACTN Length = 156 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 3/154 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 ++T EG +KL +EL + + E+ + + A + GD SEN++Y K + + R Sbjct: 4 SQIVLTAEGRQKLVEELAWREGDYAKEIVEDIKEARAFGDLSENSEYDAAKDKQAQNAAR 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + + L N ++ + + V G+ V + + +G +VG E + IS + Sbjct: 64 IAEIQAILANAQV--AATTGDLTVSIGSTVSLIDPNGEVMEVTLVGTTETNSLEHKISNE 121 Query: 122 SPMARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 SP+ A++ GD V TP+G+ + + I Sbjct: 122 SPVGHAIIGHGEGDSVEVVTPSGKTRVYTIAKIA 155 >UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachyspira RepID=C0QWD9_BRAHW Length = 154 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 3/155 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M P +T+EGY+K K +L L + E + + A GD ENA+Y K++ ++ Sbjct: 1 MAKP-ITKEGYDKAKSKLADL-KAEFETLPAIIAEAREKGDLKENAEYHAAKEKQGLLNA 58 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYIS 119 ++ L L +I+D + + V FG V++++ +RIVG E K+ I+ Sbjct: 59 QISKLESDLAGCEIIDPANLDKDTVTFGKRVKVKDKSRNAVFEYRIVGELEADMSKNEIT 118 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 I +P+A+ LL K++GD+ + PAG+ + I Sbjct: 119 IVTPIAKGLLGKKIGDVVTIKVPAGDKVLEILEIS 153 >UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=Lactobacillus RepID=GREA1_LACPL Length = 156 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 4/152 (2%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +T GY ++QE+ L +++RPE + + AA+LGDRSENA+Y K+ L ++ R+R Sbjct: 6 NKMTAAGYHAIEQEIEDL-KQQRPERIRILAAAAALGDRSENAEYSSAKRDLGRLESRLR 64 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDS 122 YL K L+ +IV + ++ G +V IE DD +++VG E + IS S Sbjct: 65 YLNKQLQYAQIVQPA--DNDQLDIGKFVTIEFLDDHDQITYQLVGKQEANLEQQKISFTS 122 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 P+ +AL V D+ VN P G V A++ Sbjct: 123 PIGQALANHTVDDVVTVNAPNGAYQVKVIAVK 154 >UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acidobacteria RepID=Q01RT9_SOLUE Length = 164 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 1/143 (0%) Query: 12 EKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLEN 71 +KL+ E+ L E ++ K++ A GD ENA+Y K R + R+ L L Sbjct: 6 KKLQDEITALEYELHVDLPKEILKARLHGDLKENAEYHAAKDRQGFVSARLGQLKSRLGQ 65 Query: 72 LKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLK 130 L ++D++ K G+ V + + + +V +E +S SP+ RALL Sbjct: 66 LAMIDFTKIPRDKAGLGSTVVVLDVKSDQEITYHLVTSEEADAPNGKVSTTSPIGRALLG 125 Query: 131 KEVGDLAVVNTPAGEASWYVNAI 153 K VGD V +P G + + Sbjct: 126 KTVGDEVKVMSPGGVKELEILKL 148 >UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2N3_SALRD Length = 164 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 50/154 (32%), Positives = 84/154 (54%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T +T EG E+LK+EL+ L EER + ++ A + GD SENA+Y K+ +++ R Sbjct: 10 ETVYMTEEGLEELKEELHQLKTEERSRIADEIAEARAKGDLSENAEYDAAKEEQGKLEAR 69 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 ++ + + +IVD S + K + + V +EN D G F +V +E ++ IS+ Sbjct: 70 IKQIEDTIARARIVDESTVDDSKAYILSDVTVENLDTGDEQTFTLVSEEEANISENKISV 129 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 DSP+ LL +E GD ++ PAG + + I Sbjct: 130 DSPIGEGLLAQEEGDEVSIDVPAGTVHFKIKDIS 163 >UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=Lactobacillaceae RepID=A5VME9_LACRD Length = 165 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 7/158 (4%) Query: 1 MKTPL---VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLRE 57 MK +T GY ++++++ L ++RP +++ A +LGD SEN +Y K+ LR Sbjct: 10 MKNVYFQKMTANGYHEIEEQIAKLQ-QQRPAKIEQLKAARALGDLSENTEYSTAKRELRH 68 Query: 58 IDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDG-VTHRFRIVGYDEIFGRKD 116 ++ R+RYL K L+ +IV +P+ + + G V IE +D + IVG E K Sbjct: 69 LESRLRYLNKQLQYAEIV--TPKNDHTIDLGTTVTIEFEDDHEQETYHIVGKQEADLAKQ 126 Query: 117 YISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 IS DSP+ +A+L + G V P + +E Sbjct: 127 KISFDSPLGQAILHQTAGTTVTVEAPQSSYKVKIVKVE 164 >UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Mycoplasma RepID=GREA_MYCGE Length = 161 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 9/158 (5%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 +T+EG+++L++EL L + +RPE+ + + A GD SENADY K + EI+ R+ Sbjct: 5 KNYLTQEGFKQLEKELENLIQVKRPEIIRLLQEARDQGDLSENADYDAAKAQQGEIETRI 64 Query: 63 RYLTKCLENLKIVDY--SPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 + L N K++ + + KV G+ VEI + ++ IVG E + IS Sbjct: 65 AEIQDILANAKLISDHQAKTKVTKVSLGSTVEIYDYSSKSNEKYTIVGTLEANPEEHKIS 124 Query: 120 IDSPMARALLKKEVGDL---AVVNTPAGEASWYVNAIE 154 +SP+A A+ + +GD + P + I Sbjct: 125 NESPLALAIYGRLIGDECDVVGIEVP---YRVKILKIS 159 >UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3Z7_9BACT Length = 609 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 1/157 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T +V+ E EK K E + L ++ PE K++ A S GD EN +++ K+ R + RR Sbjct: 452 QTLIVSWESMEKKKAEYDDLVNKKIPENVKEIQVARSYGDLRENFEFKAAKEMQRVLSRR 511 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISI 120 + L + D++ +V G V + E DG T + I+G + K +S Sbjct: 512 RAETERDLAQARGTDFANPDTAQVSVGTIVTLKETGDGRTDVYTILGAWDGDPDKGIVSY 571 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 S +A+AL+ + G+ V T G+ + + IE K Sbjct: 572 QSALAQALIGHKPGEQVNVPTEHGDRTARIEKIEAYK 608 >UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipelotrichaceae RepID=B7CAB2_9FIRM Length = 162 Score = 141 bits (357), Expect = 5e-33, Method: Composition-based stats. Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 6/156 (3%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 VT+EGY L E L + R EV ++ A + GD SENADY ++ +++ R+R Sbjct: 7 YVTQEGYNDLVNEHENLVHKVRQEVIVELQEARAQGDLSENADYDAAREHQAQVEGRIRE 66 Query: 65 LTKCLENLKIVDYSPQQEGK-----VFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYI 118 L ++N +I+ S E K V G+ V+I + D F IVG E + Sbjct: 67 LEAMIKNAEIITESADVEDKKKKNVVKLGSTVKILDLSDNQEVTFNIVGTIEADPFNGKL 126 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 S +P+A ++ +VGD+ V + I+ Sbjct: 127 SNTTPLAEVIMDHKVGDVCTVKRVEEPYDVKILEIK 162 >UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Actinomycetales RepID=D2PP26_9ACTO Length = 169 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 7/159 (4%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T++GY++LK EL +L R E+T++++ A GD EN Y K +I+ R Sbjct: 8 SVVWLTQDGYDQLKSELEHLKGPARAEITQRISEARDEGDLKENGGYHAAKDEQGKIEAR 67 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDE-----IFGRKD 116 +R L L ++ + +P+ +G V G V I ++G E D Sbjct: 68 IRQLEDMLRRARVGE-TPKDDGVVEPGMKVSITFAGDDDVETFLLGSRELLALDTSVDID 126 Query: 117 YISIDSPMARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 S SP+ A++ K+ GD A P G+ + + A E Sbjct: 127 VYSPQSPLGAAIMGKKKGDKATYEAPNGKDVTVEIVAAE 165 >UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Borrelia RepID=GREA_BORBU Length = 901 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 2/159 (1%) Query: 1 MKTPLVT-REGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREID 59 M+ +T K ++EL YL E PE +K++ A LGD ENA+Y K++ + + Sbjct: 741 MEIGFLTILSSLNKKQKELKYLKEVEIPENSKEIGKARELGDLKENAEYHSAKEKQQFLT 800 Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYI 118 +R+ L +EN K++D Q V FG V I N+ G + I+G E + I Sbjct: 801 KRLNSLMLEIENAKVIDTKDLQSSVVGFGTKVVILNEVTGKDESYLILGPWESNPDEGII 860 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 S SP LL GD ++V IE +K Sbjct: 861 SYKSPFGENLLDSREGDSLNFVINNTNFKYFVKKIEPIK 899 >UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514 RepID=B9XEY1_9BACT Length = 170 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 13/154 (8%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T +G ++L+ ELN L E+R + + G+ S N + ++ + + Sbjct: 29 AKNYLTPDGAQRLRAELNRLQAEKRSQT--------ATGEFSGN-----AQTEMQLVGQH 75 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + L + L +IV PQ +V FGA V + ++ G R+RIVG DE +D++S Sbjct: 76 ILQLEQSLATAEIVPPPPQPWEQVRFGATVTVRDESGNETRYRIVGVDETDIDRDWVSWL 135 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ARAL+ +G+ PAGE + +I Y Sbjct: 136 SPIARALINARIGERVHFRFPAGEKQLEIVSITY 169 >UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospira RepID=Q04UP0_LEPBJ Length = 927 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 1/150 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 LVTR + K+E +L E PE +K + A GD ENA+Y+ +R ++ ++ Sbjct: 768 LVTRRALNRKKEEFEHLLNVEMPENSKDIGEAQERGDLRENAEYKAAMERQVQLQAAIKR 827 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSP 123 L +++ I+D + + K+ G +++N+ G + I+G + K IS SP Sbjct: 828 LEAEIKSAIILDLTNVKTDKINIGVTAKLKNESTGEVVAYSILGAWDADTEKHIISYQSP 887 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAI 153 +A++LL K+VGD AV+N E + V I Sbjct: 888 LAKSLLGKKVGDAAVLNLTGAETRYTVLEI 917 >UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Acholeplasmataceae RepID=GREA_ACHLI Length = 158 Score = 141 bits (356), Expect = 8e-33, Method: Composition-based stats. Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 3/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K +T+ G ++LK EL +L +R E + + A GD SENADY + I+ R Sbjct: 5 KVYELTQSGLDQLKDELTHLKDVKRVENLEALKEAREQGDLSENADYDAARNEQARIEAR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + + L+N+KI+ + V G V + + + +VG E + ISI Sbjct: 65 ILEIESILKNVKII-RTNDDSTTVNIGKKVLLHFVEKNKDVEYHVVGTIEADPKNFKISI 123 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEAS-WYVNAIE 154 +SP+ RA+ KEVGDL + + + S + AI Sbjct: 124 ESPLGRAIKGKEVGDLVQIKSATNKQSNVEIKAIS 158 >UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteria RepID=D0J9T5_BLASP Length = 162 Score = 141 bits (355), Expect = 9e-33, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 2/158 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K +T+EG +KL+QE+ L ERP+++ ++ A GD SENA+Y K+ ++ Sbjct: 5 KFEYITKEGLKKLQQEIERLENIERPKISMQIAEARDKGDLSENAEYDAIKEAQEFLEMN 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISI 120 + L K L N +I+D S +V + V ++N G + +V E + ISI Sbjct: 65 IAKLKKKLSNARIIDGSQINRTRVSILSTVRVKNLTYGGEQIYTLVPEGEADLKSGKISI 124 Query: 121 DSPMARALLKKEVGDLAVVNTPA-GEASWYVNAIEYVK 157 ++P++ LL K+VG +A + P + + I + + Sbjct: 125 NTPISTGLLGKQVGQIAHIKLPNKMILDYEILEIAFSE 162 >UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9R4_ACIC5 Length = 165 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 12 EKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLEN 71 +KL +++ L E E+ ++ AA+LGD SENA+Y K+R ++ R+ L K + Sbjct: 7 KKLLEDIKQLEHELAHELPAEIKKAAALGDLSENAEYHMAKQRQEFVNARLGQLKKRMAE 66 Query: 72 LKIVDYSPQQEGKVFFGAWVEIENDDGVTH-RFRIVGYDEIFGRKDYISIDSPMARALLK 130 L +V+ + +V FG+ VE+ + +++V +E K IS SP+ RAL+ Sbjct: 67 LSLVNLANIPHDRVAFGSTVEVFDTSKDEKIEYKLVTSEESDVSKGLISTTSPIGRALIG 126 Query: 131 KEVGDLAVVNTPAGEASWYVNAI 153 K+VGD A V TP+G V + Sbjct: 127 KQVGDTATVVTPSGNRELEVLKL 149 >UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDC6_THET1 Length = 159 Score = 139 bits (351), Expect = 2e-32, Method: Composition-based stats. Identities = 48/152 (31%), Positives = 84/152 (55%), Gaps = 4/152 (2%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T +G ++L++EL L ER +++ ++ A GD SE+ +Y+ K ++ R++ L Sbjct: 9 LTEQGLKELREELERLRTVERAKISARIREAKEGGDISESGEYEDAKHSQAFLEGRIKEL 68 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKD---YISIDS 122 K L N +++D S Q G V G+ V +E ++G T+ + IV E +D IS S Sbjct: 69 EKLLANAEVIDRSAQPAGTVGLGSKVTVE-ENGRTYTYTIVDGAEAGRGRDGEVRISSKS 127 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 + ALL + VGD V PAG+ ++ + ++E Sbjct: 128 AVGSALLGRRVGDSVEVEVPAGKLTFKILSVE 159 >UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Mycoplasma RepID=GREA_MYCAP Length = 163 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 3/158 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + ++ E Y K K E L ERP V + A + GD SENA+Y + R E++RR Sbjct: 7 EKIYLSEETYNKYKNEYTELVTVERPAVQASLKEARAQGDLSENAEYDAARDRQSEVERR 66 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L + LEN +I+D + K GA V N I+G + ++ IS Sbjct: 67 ILELERILENAEIIDTKSAVQNKAGIGATVRYLNMKTNKELVVTIMGPHDSNPIENKISN 126 Query: 121 DSPMARALLKKE-VGDLAVVNTPAGEASWYVNAIEYVK 157 +SP+A+A+++ +GD+ V P + + V I Y K Sbjct: 127 ESPVAQAIMEANGIGDVVEVEVPQ-KYNIKVLDISYAK 163 >UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Mycoplasma RepID=GREA_MYCPU Length = 157 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 4/152 (2%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 +T+E +K ++E +L ERP V ++ A GD SENA+Y +++ +I+ R+ Sbjct: 6 KIYLTQETIKKYEEEKWHLINVERPAVILEIKEARQQGDLSENAEYDAAREKQGQIEDRI 65 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISID 121 L L N + K+ G+ V I N G F+IVG + ++ IS + Sbjct: 66 TELENILSNA--ISIQESHSDKIGLGSVVRILNQSTGKERTFKIVGSFDTDPTQNKISYE 123 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 SP+A++++ GD+ ++ P + + + ++ Sbjct: 124 SPLAKSIIGFSKGDVVEIDAPD-KYTTKILSV 154 >UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=GREA_MYCA5 Length = 159 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 77/154 (50%), Gaps = 3/154 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T + +++ ++ L YL RP+V +++ A + GD SENA+Y + + I+ Sbjct: 6 EKIYLTADSFKQYQERLQYLQEVLRPQVIEEIKEARNQGDLSENAEYDAARDKQATIENE 65 Query: 62 VRYLTKCLENLKIV-DYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 + + L+N +I+ + +Q V G+ V + + D F+IVG + IS Sbjct: 66 ITEIQHILDNYEIIKTQTNRQVSVVRIGSNVSVVSLKDDTVINFQIVGALDTDPFNGKIS 125 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 SP+A+A++ ++ G++ V P + + + Sbjct: 126 NTSPLAKAVIGRKAGEVVEVEAPN-KYQVKIVHV 158 >UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostridium RepID=B2V1C0_CLOBA Length = 155 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 1/153 (0%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +T E +KL++EL Y +R E+ K+ AA+ GDRSENA+Y+ RE D R++ Sbjct: 3 NTLTEENMKKLQEELEYRLTVKRAEIAKEKLVAAAHGDRSENAEYKEACANYRENDNRIQ 62 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDS 122 YL + ++D + + + + I+ +D +V ++ ISI+S Sbjct: 63 YLMTMISTATVIDDTEIDKSSLGINSKARIKFVEDDDEDVITLVTTMDLDPENMLISIES 122 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + +AL+ K+ G+ V P + + + I Y Sbjct: 123 DLGKALMGKKAGETVEVEAPGAKYTVKILEILY 155 >UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9H5_COPPD Length = 163 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 3/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + ++T EGY+K+ +EL YL +R EV +K+ A +LGD SEN++++ K+ ++ R Sbjct: 6 EEAILTEEGYKKILEELKYLKEVKRKEVAEKIQEARALGDLSENSEFEAAKEEQALLEER 65 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVG-YDEIFGRKDYIS 119 + L + N ++V +V G V + ++ G F IVG +E+ IS Sbjct: 66 IARLETLVYNARVVKAEDLALDQVSVGTKVLVLDESAGREESFIIVGNSEEVDPFSGKIS 125 Query: 120 IDSPMARALLKKEVGDLAVVNTPAG-EASWYVNAI 153 SP+ LL ++ GD + G +A + + I Sbjct: 126 SKSPLGSRLLGRKRGDRVEIKLRNGSKAVYEILDI 160 >UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PP41_CHIPD Length = 157 Score = 137 bits (347), Expect = 7e-32, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 1/152 (0%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 VT+E +++++EL++L + R E+ + + A GD ENA+Y K+ + +V Sbjct: 4 INYVTKETLDQMREELSFLKTKGRAEIARAIAEAREKGDLKENAEYDAAKEAQGMHEAKV 63 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISID 121 L + +IV+ KV V I N + T +++V E + + IS+ Sbjct: 64 AILESAIATARIVEADSIDTSKVSILCKVTITNMANKKTVTYQLVSEKEADLKLNKISVT 123 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 SP+ + LL K VG++A V+ P G + + I Sbjct: 124 SPIGKGLLGKAVGEIADVHAPNGSLKFKIENI 155 >UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0F0_ACIFD Length = 160 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 2/158 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +++ Y+ L QEL L + R E+ K + A +LGD SEN DY K +++ Sbjct: 1 MSEVEISQATYDALVQELEELTTQGRIEIAKAIEAARALGDLSENGDYHAAKDAQGKMEA 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGY-DEIFGRKDYIS 119 R+R + + L++ ++V + +V G V + + +VG +E + +S Sbjct: 61 RIRQIQQILQSARVV-SADLPTDEVRPGVVVGLRYEGEDDVEHYLVGSIEERHPGLEVVS 119 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 SP+ ALL VG P G V I +K Sbjct: 120 PTSPLGEALLGARVGAWVEYEAPRGTLKVQVVEIGPLK 157 >UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Bacilli RepID=GREA_STRP2 Length = 160 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 KT +T E EKL++EL L RPEV +++ A S GD SEN++Y+ K ++ + Sbjct: 4 KTYPMTLEEKEKLEKELEELKLVRRPEVVERIKIARSYGDLSENSEYEAAKDEQAFVEGQ 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISI 120 + L + +IV+ + +V G V I E + + IVG +S Sbjct: 64 ISSLETKIRYAEIVNSDAVAQDEVAIGKTVTIQEIGEDEEEVYIIVGSAGADAFAGKVSN 123 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ +AL+ K+ GD A + TP G + +E Sbjct: 124 ESPIGQALIGKKTGDTATIETPVGSYDVKILKVE 157 >UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=Firmicutes RepID=GREA_STRPG Length = 160 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 1/132 (0%) Query: 24 EERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEG 83 RPE+ +++ A S GD SEN++Y K ++ ++ L + +I+D + Sbjct: 26 VRRPEIVERIKIARSYGDLSENSEYDAAKDEQAFVEGQISTLETKIRYAEIIDSDAVAKD 85 Query: 84 KVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTP 142 +V G V + E + IVG IS +SP+A+AL+ K+ GD + +P Sbjct: 86 EVAIGKTVIVQEVGTTDKDTYHIVGAAGADIFSGKISNESPIAQALIGKKTGDKVRIESP 145 Query: 143 AGEASWYVNAIE 154 A + ++E Sbjct: 146 AATYDVEIISVE 157 >UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostridium RepID=B9E669_CLOK1 Length = 157 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 2/154 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ ++T G +KL++EL YL +R E+ + A + GD SENADY K+ + Sbjct: 4 MQDVILTEAGKKKLEEELEYLKTVKRVEIKAALKAARAQGDLSENADYSAAKEDQSMTET 63 Query: 61 RVRYLTKCLENLKIVDYS-PQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 R++ L L+N I++ S + A V+ + D +V E + IS Sbjct: 64 RIQELEYQLKNAVIIESSLETDVFDINRTALVKFYDVD-EVEEVTLVSSVESDVKNMRIS 122 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 I+SP+ +AL + +VGD A V +P G V + Sbjct: 123 IESPLGKALFRLKVGDKATVISPDGNYDVEVEKL 156 >UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87FB5 Length = 144 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 87/144 (60%), Gaps = 2/144 (1%) Query: 14 LKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLK 73 +++EL+ L + +RPE K ++WAA GDRSEN DY Y KK+LR+ID R+++L +E+ Sbjct: 1 MQRELSSLIKLDRPETVKVISWAAGNGDRSENGDYIYGKKKLRQIDSRIKFLLTAIEDAD 60 Query: 74 IVDYSP-QQEGKVFFGAWVEIENDDGV-THRFRIVGYDEIFGRKDYISIDSPMARALLKK 131 IV S + KV+FGA V++ ++ T RIVG EI IS SP+A+AL+ + Sbjct: 61 IVHPSTSIDKKKVYFGANVKLLDEQSKSTLDIRIVGAHEINHNIGNISWLSPLAKALIGR 120 Query: 132 EVGDLAVVNTPAGEASWYVNAIEY 155 DL V TP ++ + ++Y Sbjct: 121 TSSDLIEVQTPMNIKTYIILKVDY 144 >UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Thermotogaceae RepID=GREA_PETMO Length = 159 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 3/156 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +TREGYEKLK+E L + EV +++ A LGD SEN++Y+ K ID R Sbjct: 4 QVYQLTREGYEKLKREREELKKRLMGEVAERIKEARELGDLSENSEYEEAKNEQGMIDSR 63 Query: 62 VRYLTKCLENLKIVDY-SPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 ++ + L+N +I++ V G V+I++ F +V E ++ IS Sbjct: 64 IKEIDYILDNAEIIENGGNHDNSTVSLGKKVKIKDYRLNREQEFVLVTPQEANIEENKIS 123 Query: 120 IDSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIE 154 I+SP+ R+LL ++ G++ + T G + I Sbjct: 124 IESPIGRSLLGRKKGEVINIKTARGSSKKIEIKEIS 159 >UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=Q0PQI1_9GAMM Length = 166 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 66/126 (52%), Positives = 89/126 (70%), Gaps = 1/126 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+P +T +G+++L E LW+ R EV K ++ AA+ GDRSENA+Y Y KK LREIDRR Sbjct: 35 KSPYITSDGHQRLLAEEQGLWKRRR-EVVKALSAAAAEGDRSENAEYIYRKKELREIDRR 93 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 +RYL K + LK+V+ P +VFF AWV +E++ GVTHR+RIVG DEI + DYIS+D Sbjct: 94 IRYLQKRIPELKVVEQPPSNRQQVFFAAWVTLEDEQGVTHRYRIVGPDEIDHQADYISMD 153 Query: 122 SPMARA 127 SP+ Sbjct: 154 SPLGAG 159 >UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIH5_9BACT Length = 159 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 6/157 (3%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 + +T+ G ++L++ +N L ERPEV K V A GD SENA+Y+ ++R R ID + Sbjct: 4 SQFITKTGMQRLQKRINELL-AERPEVIKAVAIAREFGDLSENAEYKAARERQRAIDNEI 62 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR-FRIVGYDEIFGRKD----Y 117 YL + NLK++D S + V FG + E+ + + +VG +E+ + Sbjct: 63 DYLRRRSANLKVIDTSEFPKDMVRFGTYCVAEDINTKECICYHLVGPEELNYYNEEGIQE 122 Query: 118 ISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SI SP+ +ALL K++G++A+V P GE + I+ Sbjct: 123 VSIVSPIGKALLSKKIGEIAIVKAPIGERKLKIREIK 159 >UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verrucomicrobia RepID=B1ZZX3_OPITP Length = 616 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 1/151 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +V++ YE+ ++E + ++ PE +K + A GD EN++Y+ K+ + + Sbjct: 459 IVSKASYERKREEYETIVSKKIPENSKAIAAAREHGDLRENSEYKMAKQEQQVLMAHKTN 518 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + L +I D+ +V G VE+ + DG + ++G + K +IS +P Sbjct: 519 LERDLGRARISDFKDASIDQVSVGTVVEVASVKDGHHTTYTVLGAWDGDPEKHFISYKTP 578 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 ALL K+ GD+ V T A + + + +I Sbjct: 579 FGAALLGKKTGDVINVKTDASDEDYAIVSIA 609 >UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBD2_ELUMP Length = 156 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 2/156 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ ++R+ YEKL+++L L +E + +++ ++ AA GD ENA+Y K R E Sbjct: 1 MEKYYLSRKNYEKLREDLTAL-KEIKAKLSLEIGEAAQQGDLRENAEYAAAKSRQEETLV 59 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYIS 119 +++ L + L N +I D + + GA V + + + + +VG E K +S Sbjct: 60 KIQDLEQKLRNAQITDDIQVDKSEARIGATVTVHDISADIDFTYTLVGSMESNPEKGLLS 119 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + SP+A ++L K+ G+ P G+ + + +EY Sbjct: 120 VQSPLAVSILGKKEGEEFEAVLPKGKKMYKLVKLEY 155 >UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae RepID=C6WVB7_METML Length = 168 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 14/152 (9%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 VT G +L+ T + + A L AD + K ++ EI+R +R Sbjct: 29 NYVTPSGALELQ--------------TLEESLVAELNRLKLTADDTFAKDKVAEIERDLR 74 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 Y+ L++ +VD + Q V FGA +E+E+ G H F IVG DE + +S SP Sbjct: 75 YVRARLDSAILVDPTKQSHETVLFGATIEVEDGAGAQHTFHIVGEDEADASINKVSWVSP 134 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +A++LL ++VGD PAG + + I Y Sbjct: 135 LAKSLLGQKVGDTVTWQRPAGNINLEILDIHY 166 >UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bifidobacteriaceae RepID=B8DTJ6_BIFA0 Length = 160 Score = 132 bits (333), Expect = 4e-30, Method: Composition-based stats. Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K L+T+E Y+K+K+EL + E R E+T+++ A + GD SEN YQ ++ + + R Sbjct: 6 KVVLLTQEAYDKMKEELAHREGEYRDEITERIAAARAEGDLSENGGYQAAREEQSKNEGR 65 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDY--IS 119 + L L N KI++ + G+V G+ V IE G ++ I G +I DY IS Sbjct: 66 INELIVKLRNAKIIE--APKAGEVGNGSLVTIELG-GNEMQYVI-GSRDITVATDYDVIS 121 Query: 120 IDSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIEYVK 157 +SP+ A++ +VGD+ P G E S + E + Sbjct: 122 PESPIGGAIIGHKVGDVVTYKAPNGREISVTIKESEPLN 160 >UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZQE9_OPITP Length = 166 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 50/150 (33%), Positives = 69/150 (46%), Gaps = 13/150 (8%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T G E+L +ELN L ERP + + K+ LR++D R R Sbjct: 30 YLTEAGAERLHEELNRLRTVERPALAGAAADLDA-------------KRELRKLDERARE 76 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 L + L +I+ V FGA V ++ +DG T +RIVG DE IS SP+ Sbjct: 77 LQQILATAEIISSPAPDRSIVRFGAKVTVKEEDGTTSTYRIVGIDETEFYTGGISFQSPL 136 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 A+ALL VGD +PAG + IE Sbjct: 137 AQALLGASVGDRIQFQSPAGPRQLEIQLIE 166 >UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Actinomycetales RepID=A0JU41_ARTS2 Length = 164 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 6/150 (4%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+E +++LK EL++L R E+ +K+ A GD EN Y K+ +I+ R+R L Sbjct: 12 LTQEAFDRLKAELDHLSGAGRAEIVQKIEAARQEGDLKENGGYHAAKEEQGKIEARIRQL 71 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEI--FGRKDYISIDSP 123 T L + + + SP +G V G V + G F ++G EI D S SP Sbjct: 72 TVLLRDAHVGE-SPADDGIVEPGMIV-VARIAGDEETF-LLGSREIAGDSDLDVFSEKSP 128 Query: 124 MARALLKKEVGDLAVVNTPAGE-ASWYVNA 152 + A++ + GD P G+ + + + Sbjct: 129 LGSAIVGHKEGDKLSYTAPNGKDITVEILS 158 >UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pseudomonas RepID=Q4K5S3_PSEF5 Length = 197 Score = 131 bits (331), Expect = 5e-30, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 1/144 (0%) Query: 13 KLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENL 72 ++ + NY+ + E+ +V S + +K+R+ E++R +RY T+ L + Sbjct: 55 QISAQPNYVTPQGLAELQARVALLHSQHSEQNDLGDDADKQRMAELERDLRYFTQRLHSA 114 Query: 73 KIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKE 132 ++V + KV G+ V ++ ++VG D+ K I+ SP+ RALL + Sbjct: 115 QVV-TTANSTDKVQIGSRVTFADEQDRQQSVQLVGEDQADAAKGLINWASPLGRALLGAQ 173 Query: 133 VGDLAVVNTPAGEASWYVNAIEYV 156 GD + PAG + IE Sbjct: 174 PGDEVLWQRPAGNQLIEIIRIEPA 197 >UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxalobacteraceae RepID=A6STV7_JANMA Length = 175 Score = 131 bits (330), Expect = 8e-30, Method: Composition-based stats. Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 9/155 (5%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +T +GY L+QEL L RP AA D ++ A + LREI++R+ Sbjct: 27 NYITPDGYRHLQQELQQLLDVARP--------AAMQMDAADTAMASAQEASLREIEQRIH 78 Query: 64 YLTKCLENLKIVDYSPQ-QEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 YL +E+ ++VD S ++FFGA V+ EN G TH IVG DE+ + IS S Sbjct: 79 YLQTRVESAEVVDASVHADGDRIFFGASVDYENTAGETHTATIVGLDELDPAQGRISWLS 138 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 P+A++LL E GD ++ TPAG +V + Y Sbjct: 139 PLAQSLLGAEEGDTVLLQTPAGPEELHVLTVRYPA 173 >UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Treponema RepID=GREA_TREPS Length = 162 Score = 131 bits (330), Expect = 9e-30, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 1/154 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +VT + K+EL L PE ++++ A LGD ENA+Y+ ++ ++ V Sbjct: 8 VVTAKMLNAKKKELQDLLDVRIPENSREIGRALELGDLRENAEYKAAREEQTRLNNMVTR 67 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + +E ++ D + G+V FG + ++N G + I+G E + IS SP Sbjct: 68 LQEEIERAQVFDPTTVVAGRVSFGTVISLKNHTSGEDETYTILGPWESAPERGIISYMSP 127 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 + LL ++ G+ E + + +I + Sbjct: 128 LGSNLLNRKTGEQLAFTVGEHEKVYEILSISAAE 161 >UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Mycoplasma RepID=GREA_MYCH7 Length = 160 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 3/152 (1%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 L+T++ E++++EL +L ER V +++ A S GD SENA+Y +++ I+ R+ Sbjct: 8 KILLTQQKLEEIEKELEHLINVERVNVIQEIKDARSQGDLSENAEYDVAREKQGIIESRI 67 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISID 121 R L + KI+ + +V G+ V +EN + G F+IV + K IS Sbjct: 68 RELETIISKAKII-KADLGSSRVSIGSKVSLENVESGEIQTFQIVSSIDADPFKSKISNF 126 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 SP+A+ALL + GD V+ + S + + Sbjct: 127 SPIAQALLGQHQGDEVEVDV-NEKYSVRILEV 157 >UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPJ1_9BACE Length = 197 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 2/148 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +TR+ + +++EL+Y RP++ + V A GD SEN +Y+ K+ + R+R+L Sbjct: 35 LTRKDLQMMREELDYRRITLRPQLLEAVKEARGFGDLSENFEYKAAKQEKNRNESRIRFL 94 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + ++ V V + +D T +++V IS +SP+ Sbjct: 95 ENMIRTAVVISDQAAP-DTVGLYDKVTVYLEEDDETETYQVVTTMRQDALHGRISKESPV 153 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNA 152 ALL K VGD + + V Sbjct: 154 GSALLGKRVGDRIYIQVNDNYGYYVVIK 181 >UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MF39_PARUW Length = 723 Score = 129 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 76/147 (51%), Gaps = 4/147 (2%) Query: 7 TREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLT 66 T EGY K++ + + E E +++ A +LGD EN+++++ ++R + ++ L+ Sbjct: 575 TEEGYLKIQDRIRQIGTVEVVENAREIEAARALGDLRENSEFKFAQERRARLQSELKTLS 634 Query: 67 KCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMAR 126 + +I+ +V G+ +++ + G R+ I+G + K+ +S++S A+ Sbjct: 635 EQFGRARIITPDDILTDEVGIGSVIDLIDSQGQKIRYSILGPWDADPEKNILSLNSKFAQ 694 Query: 127 ALLKKEVGDLAVVNTPAGEASWYVNAI 153 A++ K++GD + ++ V ++ Sbjct: 695 AMIGKKIGDQFQFK----DETFKVLSL 717 >UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK30_9BACT Length = 693 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 6/158 (3%) Query: 2 KTPLVT-REGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 K P VT + Y+ L++E L E P+ +K + A GD EN +++ K R + + Sbjct: 531 KLPQVTSQRSYKALQEEHERLVNTEIPDNSKAIAAAREHGDLRENFEFRAAKDRQKYLQL 590 Query: 61 RVRYLTKCLENLKIVDYSPQQ-EGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 RV L L + D+S + + +V A V I++ + T + IVG + K+++S Sbjct: 591 RVGELDAMLNKIGPTDFSEFKVKNRVIPAAKVTIKSPEAET-TYSIVGMLDGDPDKNWLS 649 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 ++P+A+++L +VGD + P G+ + A+E + Sbjct: 650 FETPLAKSMLGHQVGD--SIELPGGD-EAEILAVEPLD 684 >UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia mucilaginosa RepID=D2NP88_9MICC Length = 189 Score = 127 bits (321), Expect = 9e-29, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 10/154 (6%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T++ +++L QEL YL R E+ ++ A GD EN Y + + + R++ L Sbjct: 33 LTQDAFDRLTQELEYLSGPYRQEIVDRIAQARDEGDLRENGGYHAARDEQAKNEARIKQL 92 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDE------IFGRKDYIS 119 LE I D +P +G V G +E E G T +F ++G E S Sbjct: 93 KHLLETAHIGD-TPADDGVVEHGMVIEAEV-AGRTLKF-LLGSREIEDTLPAGSDLKVFS 149 Query: 120 IDSPMARALLKKEVGDLAVVNTPAG-EASWYVNA 152 SP+ A++ + GD P G E S + + Sbjct: 150 EKSPLGAAIMGAKQGDEVTYTAPNGKELSAKIIS 183 >UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaeromyxobacter RepID=B4UMG4_ANASK Length = 169 Score = 127 bits (321), Expect = 9e-29, Method: Composition-based stats. Identities = 56/154 (36%), Positives = 73/154 (47%), Gaps = 15/154 (9%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 VT EG L++ L L + AA L D A RL E+D R+ Sbjct: 30 YVTPEGQAALREALARLRADR--------GDAARLPDAERPA-------RLGELDARIAA 74 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 L L L ++ EG+V FG WV +E +DG +R+VG DE R+ IS SP+ Sbjct: 75 LDATLGALTVLGPEATPEGQVGFGTWVTVEEEDGRRVTWRLVGPDEADARRGLISAGSPV 134 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 ARALL + GD+ VN P GEA V A+ P Sbjct: 135 ARALLGRRAGDVVEVNRPGGEAELTVVAVRRTAP 168 >UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5K0_9BACT Length = 169 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 14/151 (9%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T +G E+L++EL L ++ E + + ++ LR + R++ L Sbjct: 32 MTVDGAERLQKELAVLADQKAQ--------------LEETGEGEISRDELRRVTSRMQAL 77 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 ++ L + +++ S + +V FG +V I + GV +RIVG DE+ +IS SP+A Sbjct: 78 SQRLADAEVIAISESRGDEVRFGMFVTIRDAGGVEDEYRIVGVDEVDLEAGWISWLSPLA 137 Query: 126 RALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 +A++ +++GD+ PAGE ++ A+ Sbjct: 138 QAIVGRKIGDVVQFQAPAGEKKLHIVAVRPP 168 >UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Chlamydiaceae RepID=GREA_CHLPN Length = 722 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 73/148 (49%), Gaps = 4/148 (2%) Query: 7 TREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLT 66 T E + ++K +L L +E + K++ A SLGD EN++Y++ ++ + +R L+ Sbjct: 571 TSESFSRMKAKLQSLVGKEMVDNAKEIEDARSLGDLRENSEYKFALEKRARLQEEIRVLS 630 Query: 67 KCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMAR 126 + + +I+ KV G V ++ D G + I+G + +S+ S +A+ Sbjct: 631 EEINRARILTKDLVFTDKVGVGCKVTLKGDAGEVVEYTILGPWDADPDSCILSLQSKLAQ 690 Query: 127 ALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +L K++ D+ ++ + ++ I+ Sbjct: 691 NMLGKKLNDVVILQG----KEYKISRIQ 714 >UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R523_9CHLA Length = 731 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 72/152 (47%), Gaps = 4/152 (2%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 T T EGY + ++ + + E E +++ A SLGD EN++Y++ ++ + + Sbjct: 579 TIWTTEEGYLQTQERIRQIGTTEVVENAREIEAARSLGDLRENSEYKFALEKRSRLQGEL 638 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 + L++ L +I+ +V G+ VE+E+ + + I+G + + +S S Sbjct: 639 KRLSEQLNRARIITKDDIYLNQVSVGSIVELEDPEKNVVTYTILGPWDADADTNILSFQS 698 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 A A+L ++VG+ ++ + I+ Sbjct: 699 KFAEAMLGRKVGEEFEFR----NQNFTIRTIK 726 >UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VBG3_9CLOT Length = 195 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 3/155 (1%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +T +K+++E+ Y R E + V A + GD SEN +Y KK ++R+R Sbjct: 33 NQLTESDIKKMEEEIEYRKVVVRKEKLEAVKEARAQGDLSENFEYYAAKKDKNANEKRIR 92 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTH-RFRIVGYDEIFGRKDYISIDS 122 YL + + +I+ + +V V + ++ +RIV IS S Sbjct: 93 YLDRMVRTAEII-KDESADDEVGLNNTVRVYFEEDEEEDTYRIVTTVREDVLNGIISNIS 151 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 PM +ALL +VGD V P +++ E VK Sbjct: 152 PMGKALLGHKVGDRVEV-VPGKGDPFHIVIREIVK 185 >UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Actinobacteria (class) RepID=GREA_SACEN Length = 162 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 4/145 (2%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T++ +++LK EL+ L RP + K+ A GD EN Y ++ ++ R Sbjct: 5 QVTWLTQDAFDRLKSELDELVGN-RPVIAAKINEAREEGDLKENGGYHAAREEQGHLESR 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDE-IFGRKDYIS 119 +R L + L K+ D P + G G+ + + +D+ T +F + +E G + S Sbjct: 64 IRQLQELLRTAKVGDV-PTEAGVAKPGSVLTVRYDDEDETEKFLLATREEGAHGDLEVYS 122 Query: 120 IDSPMARALLKKEVGDLAVVNTPAG 144 SP+ +ALL + G+ P G Sbjct: 123 PSSPLGQALLDAKEGETREYELPNG 147 >UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh1 n=6 Tax=Thermaceae RepID=Q5SJG6_THET8 Length = 156 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 6/155 (3%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T+ GYE+L Q+L RE E TK + D +++ + K+ I+ R Sbjct: 3 REVKLTKAGYERLMQQLER-ERERLQEATKILQELMESSDDYDDSGLEAAKQEKARIEAR 61 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRK--DYI 118 + L L I++ + G+ VE+E+ G ++V E I Sbjct: 62 IDSLEDILSRAVILEEG--SGEVIGLGSVVELEDPLSGERLSVQVVSPAEANVLDTPMKI 119 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 S SPM +ALL VGD+ ++TP G + V AI Sbjct: 120 SDASPMGKALLGHRVGDVLSLDTPKGRREFRVVAI 154 >UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Corynebacterineae RepID=GREA_RHOE4 Length = 164 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 6/146 (4%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+E +++LK EL+ L RP + ++ GD EN Y ++ + + R+R L Sbjct: 9 LTQESHDRLKNELDQLIAN-RPVIAAEINERREEGDLKENGGYHAAREEQGQQEARIRQL 67 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEI--ENDDGVTHRFRIVGYDEI--FGRKDYISID 121 + L + K+ + +P Q G G+ V++ + D+ T F I +E + + S + Sbjct: 68 QELLNSAKVGE-APTQSGVALPGSVVKVYYDGDESDTETFLIATREEGARDAKLEVYSPN 126 Query: 122 SPMARALLKKEVGDLAVVNTPAGEAS 147 SP+ ALL+ +VGD N P G Sbjct: 127 SPLGGALLEAKVGDTREYNLPNGSTM 152 >UniRef50_B3DVF3 Transcription elongation factor GreA fused to uncharacterized associated domain n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVF3_METI4 Length = 614 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 2/152 (1%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +V+ E E+ K+EL+ L R++ PE +K + A S GD EN +Y+ K+ + RR Sbjct: 454 IVSWESLEQKKKELDELVRKKIPENSKDIAHARSYGDLRENHEYKAAKEMQVVLMRRKAE 513 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + + D+S V G V + T+ I+G + K IS + Sbjct: 514 LESMISRARATDFSNVDTTTVNIGTVVSYTDLKTNRTNSVAILGAWDSNPSKGIISYLAA 573 Query: 124 MARALLKKEVGDLAVVNTPAG-EASWYVNAIE 154 ++LL + GD+ V+ G ++ I Sbjct: 574 FGQSLLGHKTGDVLQVSLEDGITTEIRIDKIS 605 >UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L6P4_EXISA Length = 152 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 5/155 (3%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 MK P +T G+ +L L L R ER + +++ A D E+ Y ++ I+ Sbjct: 1 MK-PKLTETGHHQLTDRLVMLRR-ERTDARERLRTARKFCDFREDVTYTEAVRQYERIEA 58 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYIS 119 + L L++ IV+ Q V FG V I E T R+RIV E + IS Sbjct: 59 DILELNHLLDDATIVE--SVQSEVVTFGNRVVIREVQQEETERYRIVSEAEADLERGSIS 116 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 + SP+ R L+ +G V TP G V IE Sbjct: 117 VTSPLGRRLMGATMGQTIQVETPGGTIQVEVLHIE 151 >UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9BACT Length = 597 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 13/152 (8%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T G E+ ++ L L + R E+ A+ D E + L ++R + Sbjct: 459 YMTAAGAERYRRRLQQLV-QRRDELL-----ASPDDDLPE-------RSELATLERELAQ 505 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 ++ L+ ++ + +V FGA V +E+D G RF++VG +E + ++ SP+ Sbjct: 506 VSAVLQGAIVIRLASPPRDEVRFGAEVVVEDDRGSRSRFQLVGENEAAPERGLVNWFSPL 565 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 RAL +G TPAG ++ V I Y Sbjct: 566 GRALAGARLGQRVEWTTPAGRGAYVVREISYP 597 >UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bifidobacterium RepID=A1A150_BIFAA Length = 159 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 7/154 (4%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 KT L+T+E Y+K+K+EL + E R E+ KV+ A + GD SEN YQ ++ R R Sbjct: 5 KTILLTQEAYDKMKEELAWREGEYRDEILSKVSAARAEGDLSENGGYQAAREAQRVNQGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDY--IS 119 + LT L N KI+ + + G+V G+ V +E +G + + G ++ DY IS Sbjct: 65 IDELTVKLRNAKIL--TAPKAGEVGDGSLVTLEV-NGREMVYVL-GTRDLSIATDYSIIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAG-EASWYVNA 152 +SP+ A+ GD P G E S + Sbjct: 121 PESPIGAAINGAHAGDTVTYTAPNGREISVTIKE 154 >UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QK34_9SPHI Length = 171 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 15/156 (9%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 VT G L+ E L +E T+ L D +E ++L ++ + Sbjct: 27 SVNYVTPRGLAMLRDEFEKLEKEHALAQTQ-------LTDENERT------RQLALLNGQ 73 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD--GVTHRFRIVGYDEIFGRKDYIS 119 + L + + K+V+ +V FGA V + + + IVG DE I+ Sbjct: 74 IAALNQRIATAKVVNMQDHPLDEVRFGATVTLSSQSTGKADQQLTIVGVDEADAIHGRIA 133 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +P+AR LL K+VGD + TP GE + + +I Y Sbjct: 134 FPAPIARLLLGKKVGDFITLRTPRGENALEITSIYY 169 >UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodobacter sp. SW2 RepID=C8S319_9RHOB Length = 167 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 68/155 (43%), Gaps = 15/155 (9%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 VT G L+ L E ++ + +R + +R +R Sbjct: 26 NYVTPRGLALLQTRL--------AEAQARLAALRARPERLDKLPEAAA-------ERDIR 70 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 YL L + VD S Q G+V FGA VE+ DG ++I G DE ++ I+ SP Sbjct: 71 YLEARLRSAIPVDPSSQPAGEVAFGARVEVALADGSRQVWQITGEDEADATQNRIAPQSP 130 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 +ARALL EVGDL + P+G V AI Y P Sbjct: 131 LARALLGAEVGDLVIWRKPSGPVELEVLAIAYADP 165 >UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomycetales RepID=B2GLP4_KOCRD Length = 165 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 8/153 (5%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+E Y++LK+EL+Y+ R E+ ++ A S GD EN Y ++ + + R+ L Sbjct: 9 LTQEAYDRLKKELDYIAGPYRQEIVDRIEQARSEGDLKENGGYHAAREEQGKNEGRIVQL 68 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRF----RIVGYDEIFGRK-DYISI 120 T+ LEN ++ + +P +G + G V E G F R V D G + S Sbjct: 69 TQLLENAQVGE-APADDGVIEAGMVVTAE-IAGDEMTFLMGSREVAEDLTGGEDLEVFSE 126 Query: 121 DSPMARALLKKEVGDLAVVNTPAGE-ASWYVNA 152 SPM A+ +VG+ P G+ + + Sbjct: 127 RSPMGAAINGHKVGETVSYQAPNGKDITVKILK 159 >UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Corynebacterineae RepID=GREA_MYCVP Length = 164 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 8/146 (5%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T E Y++LK EL+ L RP + ++ GD EN Y +++ + + R+R L Sbjct: 9 LTEESYDRLKAELDQLIAN-RPVIAAEINDRREEGDLRENGGYHAAREQQGQEEARIRQL 67 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEI--ENDDGVTHRFRIVGYDE---IFGRKDYISI 120 + L N K+ + +P+Q G G+ V++ ++D+ T F I G E G+ + S Sbjct: 68 QELLNNAKVGE-APKQSGIALPGSVVKVYYDDDEKDTETFLI-GTREQGVSDGKLEVYSP 125 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEA 146 +SP+ AL+ +VG+ P+G Sbjct: 126 NSPLGGALIDAKVGESRSYTVPSGNT 151 >UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Firmicutes RepID=C4ZAT8_EUBR3 Length = 167 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 5/152 (3%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T +K++ E+ Y R + V A + GD SEN +Y+ K+ + + R+RYL Sbjct: 5 LTANDIKKMEDEIEYRKLVVRKKALDDVKVARAQGDLSENFEYKAAKQFKNQNESRIRYL 64 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 K ++ ++ ++ +V V++ DD T ++IV K+ IS +SP+ Sbjct: 65 EKMIKTAVVI-SDESKDDEVGMFNTVDVYFEDDDETETYKIVTTVRGNSLKNLISKESPL 123 Query: 125 ARALLKKEVGDLAVVNTPAGEASW--YVNAIE 154 A+ +VGD V + S+ + I+ Sbjct: 124 GAAIFGHKVGDRCEVKV-NDDYSYFVKIMKIQ 154 >UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514 RepID=B9XT30_9BACT Length = 606 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 1/154 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +V+ + E+ K E L +++ P +K++ A S GD EN +Y+ K+ + + RR Sbjct: 451 IVSWDSLERRKNEYAELVQKKIPANSKEIAIARSYGDLRENHEYKAAKEMQKILMRRKAE 510 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L L + DY + V G V++ + + F I+G + K+ IS +P Sbjct: 511 LESELVRARGTDYLNPKTDAVSIGTIVKVTDLNSSHIEHFNILGAWDSDPEKNVISYLAP 570 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 +A++LL ++ G+ + + ++ I K Sbjct: 571 LAQSLLNRKPGEEVDYEMDGQKRRFRIDEITPYK 604 >UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ureaplasma RepID=GREA_UREP2 Length = 156 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 1/154 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +++ E+L+ EL + + P +TK++ A GD SENADY K + + Sbjct: 1 MAKYTISKHRLEELQLELREILDVKWPAITKQLQDAREQGDLSENADYDAAKNEQAALKK 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R + + LEN ++++ + +V G+ +EI N +VG + + IS Sbjct: 61 RKDEIEEILENYELIEDVLRSTDEVSIGSTIEIYNYQKDCEEVITLVGSMDSDPFANKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 ID+P+ +AL+K++ G V+T A + I Sbjct: 121 IDTPLGKALVKQKKGTEVTVHTLASPYKVKIIKI 154 >UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB family n=2 Tax=Cystobacterineae RepID=Q1CX76_MYXXD Length = 167 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 15/153 (9%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T EGY L++EL + P+ + A + + + Sbjct: 29 YITPEGYRALQEELAAAQGPD-PKAGEFTELEAGVRRKERERRV--------------QE 73 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 L LE++++V+ Q G+VFFGAWVE+E++DG R+RIVG DE + +S++SP+ Sbjct: 74 LAAVLEDVRVVEPDASQAGRVFFGAWVELEDEDGGPVRYRIVGPDESDVKAGRLSVESPL 133 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 ARALL KEVG+ VV+ P G + V A++Y Sbjct: 134 ARALLGKEVGESVVVDRPRGPVEYTVTAVDYAA 166 >UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5G0_9BACT Length = 698 Score = 117 bits (295), Expect = 1e-25, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 76/156 (48%), Gaps = 5/156 (3%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 + + +++L EL+ + + PE + + A + GD EN+++ K+R + RR Sbjct: 539 NYTSVKSHKRLMAELDDIINVQVPENREALKVARAHGDFRENSEFDAAKERRNFLSRRRG 598 Query: 64 YLTKCLENLKIVD-YSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 L + L ++ + S + E G+ +E+++++G ++++G + + ++S + Sbjct: 599 ELERELTRIQPISLKSVRVEDSAVIGSEIELQDENGEKEVYQLLGAWDGDPERRFLSYRT 658 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 + +A+L ++VG G + + A+ + P Sbjct: 659 RLGKAVLNRKVGSEFS----DGSRQYKLIAVRPLSP 690 >UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X3W9_FLAB3 Length = 183 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 16/155 (10%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 VT G E L+QE L E+ D S +Y+ ++ R Sbjct: 44 AENWVTPAGMEALQQERADLISEQ------------EKLDPSHEREYRIA---FNHLNAR 88 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGV-THRFRIVGYDEIFGRKDYISI 120 ++ L + + KI+D + +G+V FGA V +N + F++VG DE K ++ Sbjct: 89 LQLLNGRMASAKIIDTARLSQGEVHFGATVTFKNLNNNLRQTFQLVGVDEANISKGKLAF 148 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +P+A+AL+ +VG+ + + + +I Y Sbjct: 149 TTPLAKALINSKVGEKVTLQLGDKTNIFEILSIGY 183 >UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobacillus fermentum RepID=D2KXD7_LACFE Length = 303 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 7/130 (5%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T GY +++++ L +++RP + ++ A LGD SEN +Y K+ LR ++ +RYL Sbjct: 20 MTPAGYRAIEEQIEAL-KQKRPTLIARLKAARVLGDLSENTEYSTAKRELRHLESCLRYL 78 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVG---YDEIFGRKDYISID 121 K L K++D S +GKV G V I DD ++IVG ++ ++ ++ D Sbjct: 79 DKQLTYAKVIDVS--DDGKVALGKVVTIRFLDDQEEATYQIVGRYQAEQASLTEEVLAFD 136 Query: 122 SPMARALLKK 131 SP+ AL K Sbjct: 137 SPLGLALKGK 146 >UniRef50_C6UNA6 Putative transcription elongation factor GreA n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UNA6_HODCD Length = 155 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 1/139 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +T GY L +LN+ + ++P + ++ A SLGD SENADYQ ++ + + Sbjct: 1 MAATTLTALGYISLVAQLNWRRQHKKPALKAQLKAARSLGDLSENADYQAARREDKLNEA 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 R+ + + L K+ + + + + V ++ DG F IVG DE + + + Sbjct: 61 RINEILQTLARAKLA-PARSAANRPSYNSTVVLKRADGKLLAFNIVGDDEAIATEANVGL 119 Query: 121 DSPMARALLKKEVGDLAVV 139 S +AR L K+VGD+ VV Sbjct: 120 SSDVARQCLNKKVGDVVVV 138 >UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostridium acetobutylicum RepID=Q97HP4_CLOAB Length = 158 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 4/141 (2%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 ++T+ Y+KLK+E Y +R E+ KK AA+ GDRSENA+Y+ K+ +RR+ Sbjct: 4 MLTKSDYDKLKEEYEYRNTVKRHEIAKKKMEAAAFGDRSENAEYKAAKEEYYHNNRRLGQ 63 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEI---FGRKDYISID 121 +++ L+N IV+ +V G+ + ++ T + ++V I +YIS+D Sbjct: 64 ISRLLKNAIIVEEDKID-DEVNIGSEMLLKIGADETFKAKLVTTLNISVEDEDIEYISVD 122 Query: 122 SPMARALLKKEVGDLAVVNTP 142 SP +AL KK VGD VN P Sbjct: 123 SPFGKALYKKHVGDSIDVNLP 143 >UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clostridiales RepID=A9KJU6_CLOPH Length = 167 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 69/148 (46%), Gaps = 2/148 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+ +K+++E+ Y R E V A + GD SEN +Y KK + + R+RYL Sbjct: 5 LTKNDIDKMQEEIEYRKLTVRKEAIDAVKEARAHGDLSENFEYYAAKKDKNKNEGRIRYL 64 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + ++ ++++ E ++ V I +D +++++ + ISI+SP+ Sbjct: 65 ERMIKTAEVIE-DHSSEDEIGINNTVSIYFEEDNEIEKYKLITTVRENSLQGLISIESPL 123 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNA 152 +A+L +V D V + + Sbjct: 124 GKAILGHKVEDRVYVKVRDDYGYYVIIK 151 >UniRef50_UPI0001746370 transcript cleavage factor/unknown domain fusion protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746370 Length = 627 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 2/155 (1%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +V+ + EK K EL L R + P+ K + A GD EN +Y+ ++ + R Sbjct: 463 VVSWDSMEKRKIELEELVRVKIPQNKKDIQIAREYGDLRENFEYKSARQHQAVLLRMQST 522 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 + L + D+ V G V++++ G T I+G + + +S S Sbjct: 523 YERELRRARGTDFVGVSTETVGIGTIVDLQDVGTGKTETQTILGAWDGDPDQSILSYLSE 582 Query: 124 MARALLKKEVGDLAVVNTPA-GEASWYVNAIEYVK 157 MA+AL+ K VGD A + T G + +I + Sbjct: 583 MAKALIGKRVGDEAELPTDTHGTRKVKIVSIRPYR 617 >UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobacter sphaeroides RepID=B9KMW2_RHOSK Length = 164 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 15/154 (9%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 LVT G L+ L ++ + DR + +R +R Sbjct: 26 NLVTPRGLADLQARL--------LATQARLRALRAREDRLDRLPEAAA-------ERDIR 70 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 YL + + +VD + Q +V FG V +E++ G + I G DE I+ +P Sbjct: 71 YLEARIASAILVDPAAQPLDEVAFGLAVTVEDEAGRRTVWEITGEDEAQATARRIAPQAP 130 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 +ARAL+ +G+ V PAGE + V I + + Sbjct: 131 LARALMGARLGEKVVWTRPAGEVTLTVTGIAHPE 164 >UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bacteroidetes RepID=A3HZU2_9SPHI Length = 166 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 16/154 (10%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 T VT G E+L+ E L E+ AA+ ++ +++ K + Sbjct: 28 TNYVTETGMEELQAEKQALIEEK------SNLTAATEQEKRIASNFISAK---------I 72 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISID 121 + L + + KIVD S Q + ++ FGA V ++ +++VG DE K+ IS Sbjct: 73 KLLDERIATAKIVDLSEQPKNEIRFGAKVTLKIGKSPKAMTYQLVGVDEADISKNKISFI 132 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+A L+ K+VG+ A ++ G+ + V I+Y Sbjct: 133 SPIAMILIGKKVGEKATLSLTKGDRVFEVMEIKY 166 >UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNZ9_AKKM8 Length = 615 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 3/153 (1%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 V+ E E K+EL L + PE + + GD EN YQ K+ + ++RR Sbjct: 460 FVSWESLEARKKELEELVNVKIPENLHNKKISRAEGDLRENGGYQDAKEVEKVLNRRRAE 519 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVT-HRFRIVGYDEIFGRKDYISIDSP 123 L L + D++ + G V ++ +G + I+G + K +S S Sbjct: 520 LEHALALARGTDFAVTDTSRAAMGTKVTLQPLNGGEPVVYTILGAWDTNPEKHIVSYLSQ 579 Query: 124 MARALLKKEVGDLAVVNTPAGEAS--WYVNAIE 154 + + L K VGD + G+ + + IE Sbjct: 580 VGKELTGKSVGDQVKIVPMDGDKKKVYTITKIE 612 >UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RPW8_9ACTO Length = 166 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 63/153 (41%), Gaps = 7/153 (4%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 ++++ +++L+ EL+ L RP + ++ GD EN Y ++ + + R+ YL Sbjct: 13 LSQDAHDRLQAELDELIAN-RPAIAAEINARREEGDLRENGGYHAAREEQGKQEGRILYL 71 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFR-IVGYDEIFGRKDY--ISIDS 122 + L ++ + V G V I DD ++G EI + S +S Sbjct: 72 KELLRTAQVGE--APSADTVSPGMVVTIYFDDDTDDTETFLLGSREISSTTELTVYSPES 129 Query: 123 PMARALLKKEVGDLAVVNTPAG-EASWYVNAIE 154 + +++L G P+G + V E Sbjct: 130 ALGKSILGTRPGQTVTYTAPSGADIKVTVVRFE 162 >UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cellular organisms RepID=C6B1R3_RHILS Length = 160 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 21/152 (13%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR-V 62 LVT G + L+ + A D + + ++R R + Sbjct: 29 NLVTEAGLKALELQFQQ---------------AREAYDAASPIEDVNERRRQAASPLRDL 73 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 RYLT L +++ SP V FG+ V DDG +RIVG DE + IS S Sbjct: 74 RYLTARLRTAQLM-PSPTSIDTVAFGSTVTFRRDDGRVQTYRIVGEDEADPKAGSISYVS 132 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 P+AR L+ K VGD+ G + AI Sbjct: 133 PVARLLMGKAVGDMVE----TGGQELEIIAIA 160 >UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax=Alphaproteobacteria RepID=B9J7D6_AGRRK Length = 160 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 19/151 (12%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 L+T G + L+ +L A+++ D +E R +R Sbjct: 29 NLMTEAGLKALELQLQQ--------ARAAYAAASTIEDVNERRRQAAGP------LRDLR 74 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 YL + + + + +P V FG+ V DDG +RIVG DE + IS SP Sbjct: 75 YLAERIRTAQPI-PAPASIDIVAFGSTVTFSRDDGRVQTYRIVGEDEADPKTGSISFVSP 133 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +A+ L+ K VGD+A V G+ + AI Sbjct: 134 VAKLLMGKSVGDVASV----GDQELEIIAIA 160 >UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betaproteobacteria RepID=B6BTF1_9PROT Length = 164 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 15/152 (9%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 VT G+++LK+ ++ + E + L D EN K+ +++R +R Sbjct: 28 NYVTPNGHKQLKETIHLIETE--------IKSIKELEDSPEN------KQNKMKLERDLR 73 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 Y K E ++D + KV FGA V + +++ ++F+IVG DE +++ +S SP Sbjct: 74 YYLKRFETAILIDKHEEN-NKVLFGAHVILIDENDEAYKFQIVGEDEADIKQNKLSYVSP 132 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +A+ L+ +GD V G ++++I Y Sbjct: 133 LAKELIGSLIGDEVVWKRADGNRVVFIDSINY 164 >UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABM5_GEMAT Length = 161 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 67/144 (46%), Gaps = 1/144 (0%) Query: 12 EKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLEN 71 ++ +E+ L E + ++ A LGD EN++Y+ +R + + R+ LT+ + Sbjct: 7 AQMAREVEKLQFELNVTLPNEIRKAVELGDLKENSEYKAALERQQFVQARLGQLTQRVTK 66 Query: 72 LKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLK 130 L +D + +V G+ V +E+ + +V D ++++ SP+ RAL Sbjct: 67 LANIDITQIPGDRVGLGSKVIVEDLQSKARETYELVFGDAGELHDGHVTMGSPIGRALQG 126 Query: 131 KEVGDLAVVNTPAGEASWYVNAIE 154 K VG+ A++ P + ++ Sbjct: 127 KSVGEEAILKLPTRIRKLQIVELQ 150 >UniRef50_Q88Q22 Transcription elongation factor, putative n=11 Tax=Pseudomonas RepID=Q88Q22_PSEPK Length = 165 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 1/141 (0%) Query: 13 KLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENL 72 ++ ++ NY+ ++ +V +L + + +K+RL + +R +RY + +++ Sbjct: 22 RISEQPNYVTASGLRQLQTRVAELNALRSELQAQGERGDKQRLADTERDLRYFSARVQSA 81 Query: 73 KIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKE 132 ++V + KV G+ V + ++VG DE I+ SP+ RALL Sbjct: 82 QVV-PAATSHSKVQIGSRVRFVDAQDQEQVVQLVGEDEADAGHGLINWGSPLGRALLGAG 140 Query: 133 VGDLAVVNTPAGEASWYVNAI 153 GD V P GE V I Sbjct: 141 PGDEVVWRRPVGEQVIEVVEI 161 >UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Tax=Flavobacteriaceae RepID=A0M1N1_GRAFK Length = 166 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 16/154 (10%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 T VT G +LKQEL L E E + ++ ID ++ Sbjct: 28 TNYVTPNGLAELKQELKDLEYERAHV---------------EAENDTEKRRAQSLIDGKI 72 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISID 121 L++ L+ +++D Q + ++ FGA V++ N+ G F+IVG DE +K I+ Sbjct: 73 NLLSERLQTARLLDSKDQPKDEIRFGARVKLTNETSGQLQEFQIVGVDEADIKKKKIAFV 132 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +P+A+A+ ++VG+ V I Y Sbjct: 133 APIAKAVTGRKVGEEIDFKLGNEIRKLKVLGITY 166 >UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococcus radiodurans RepID=Q9RRW0_DEIRA Length = 183 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 9/161 (5%) Query: 1 MKTPL-VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREID 59 M PL +T EG +L+ L + R E ++V + +E+ D ++ L ++ Sbjct: 24 MTQPLPLTPEGLSRLQAALER--EQARREEARRVVQEQMEANENESLDLAAAQETLGAVE 81 Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKD-- 116 R+ L L ++ +G+ G+ V + N G +V E Sbjct: 82 ARIEELEDQLARAVVLAPGAGNDGRAAVGSRVTLLNIGLGRELPLHLVSAAEAAAGPGTS 141 Query: 117 ---YISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +S +SP+ RALL + G+ V+ +A + V +E Sbjct: 142 GVALVSTESPVGRALLGRRAGEEFTVDLGRTQAQYRVLMVE 182 >UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=uncultured bacterium URE4 RepID=C0JZV3_9BACT Length = 112 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 1/102 (0%) Query: 54 RLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGV-THRFRIVGYDEIF 112 R ++ ++ L + + N +++D S V + V +EN + +F+IVG E Sbjct: 10 RQGLLEVKIARLKEKVANARVIDESKLSADTVQLLSKVTVENMNAKMKMQFQIVGESEAD 69 Query: 113 GRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 K +S +P+ +AL+ G++ P+G + + I Sbjct: 70 FSKGLLSASTPIGKALMGHGKGEVVEAKVPSGIMKFKILDIS 111 >UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax=Deinococcus deserti VCD115 RepID=C1CW74_DEIDV Length = 162 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRS---ENADYQYNKKRLREI--DR 60 +TREGYE+L+Q L +ER + + +T A+ D + EN + I + Sbjct: 7 LTREGYERLEQSLE----KERQRLEETITSLANTVDDAMDLENRSLNAAQIGQERIAIEA 62 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKD--- 116 R+ L L IV+ G+V G+ V +E+D G + ++V EI + Sbjct: 63 RILELEDVLARAVIVEEEDLPRGQVAVGSVVMLEDDKHGRQLQVQLVSAVEISAMTEGVT 122 Query: 117 YISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 +S DSP+ +AL+ + G+ V AG + V ++ Sbjct: 123 QVSDDSPVGKALMGRREGETFDVELEAGRVQYTVRSV 159 >UniRef50_C7MX98 Transcription elongation factor n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MX98_SACVD Length = 154 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 8/158 (5%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 TP ++ +L++EL L + +R E+ ++ LGD ++ AD + + +DRR Sbjct: 3 STPGLSPATRSRLERELEQLRK-QRAELLPRLGE-DPLGDSADQADLVERSEVVSRLDRR 60 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVG-YDEIF-GRKDYIS 119 + + L S + EG + G V + DDG +VG E ++ Sbjct: 61 INEVVDLLHG----QISTESEGGLPSGTKVTLRFDDGSVEDMVVVGVAAEADEDDTSTLT 116 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 DSP+ +AL + GD TP GE + + + + Sbjct: 117 ADSPLGQALAGHQEGDTVTYRTPKGEVTAEIVKLTPPR 154 >UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/GreB family n=2 Tax=Aurantimonadaceae RepID=Q1YFK5_MOBAS Length = 158 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%) Query: 34 TWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI 93 A+L +R E A +K + I+R +RY +++ G FG+ V I Sbjct: 39 AEIAALNERKEAARQADDKIAIANINRDLRYWNARRATAELIRPRDT-GGTAQFGSVVSI 97 Query: 94 ENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 E +DG T +F IVG DE IS SP+AR+L+ + VGD+ AG A + AI Sbjct: 98 EREDGRTQQFTIVGIDEADPSAGLISYLSPLARSLIGRTVGDIVR----AGTADAEIIAI 153 Query: 154 E 154 Sbjct: 154 S 154 >UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deinococci RepID=Q1IZY0_DEIGD Length = 162 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 7/155 (4%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +TREG+E+L++ L + E T+ + +E+ + K+ I+ R+ L Sbjct: 10 LTREGFERLQRTLAQ-EQARLAEATRILQEQMETSADNEDTGLEDAKREKLNIEARIEEL 68 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGV-THRFRIVGYDEIFGRKD---YISID 121 L +++ + G+V GA V + N+ T R ++V E IS + Sbjct: 69 EDTLARATLIE-DHENAGRVELGAVVTLNNETTKQTMRVQVVSAPEATVLGGSLPRISEE 127 Query: 122 SPMARALLKKEVGDLAVVNTPAGE-ASWYVNAIEY 155 SP+ R L+ ++ + VVN G+ + V IEY Sbjct: 128 SPVGRQLMGRKKDETFVVNLENGKQVKYRVQDIEY 162 >UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochrobactrum RepID=A6X2G5_OCHA4 Length = 156 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 24/154 (15%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 LVT G ++ E+ L RE + A G+RS + I R +R Sbjct: 26 NLVTPTGLTMIEDEIARLQRE--------LADANVAGERS----------AIARISRDLR 67 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDS 122 Y T EN ++ P V FG VE+EN DDG R+ IVG DE IS + Sbjct: 68 YWTTRRENAELSVPVP-DSDVVRFGMTVELENLDDGKVRRWTIVGEDEADPSNGKISHVA 126 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 P+A L K VGD+ +N W + +++ V Sbjct: 127 PVAILLFGKPVGDVVKIN----NVEWEIVSLKIV 156 >UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1IXC6_DEIGD Length = 158 Score = 97.9 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 5/156 (3%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T EGY +L++ L + T D E+ +Q + L ++ R Sbjct: 3 EEIPMTAEGYRRLQETLEKERQRLEDATTSMAATLDDAMDL-EDRSFQAAQYDLPTMEAR 61 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKD---Y 117 + L L IV+ ++G V G+ V + ++ R ++V E+ + Sbjct: 62 ILELEDVLARAVIVEEPQARDGGVALGSVVVLRDEQHDRELRVQLVSAVEVDALAEGATQ 121 Query: 118 ISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 +S DSP+ +ALL + G+ V+ + A + V +I Sbjct: 122 VSEDSPVGKALLGRRAGESFEVDLGSSRARYTVKSI 157 >UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alphaproteobacteria RepID=B0T2S8_CAUSK Length = 161 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 19/150 (12%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 LVT G +++ EL + A + GD +++ + + R +R Sbjct: 28 NLVTPGGLVRIEDEL--------AAARAAYSAAQAGGDVAQD------RTAMARATRDLR 73 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 Y + + ++ + P + FG V + +DG FRIVG DE + +S SP Sbjct: 74 YWSARRASAQLRELDPA-LDVLQFGGSVTFDREDGRRQTFRIVGEDEADPTQGSVSYVSP 132 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAI 153 +ARALL K VGD A+V GE + AI Sbjct: 133 VARALLGKAVGDTAIV--AGGE--VEIIAI 158 >UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococcineae RepID=Q83FN6_TROWT Length = 172 Score = 95.6 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 6/152 (3%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +++E + L EL L R E+ K++ A S GD EN Y K+ I+ R++ L Sbjct: 19 LSKEAHSVLVVELEELVTTGRKEIAKRIEQARSEGDLRENGGYSAAKEEQARIEGRIQQL 78 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDY--ISIDSP 123 L + ++ +P+ G V G V G RF ++G EI S S Sbjct: 79 QDLLRHARVG-QAPKARGVVEPGVVVT-ARIGGSERRF-LLGNREIAHTSSLATYSESSA 135 Query: 124 MARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 + +A+L + G +P G + +E Sbjct: 136 IGQAILGLKEGSEIECKSPTGALIKVAILKVE 167 >UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RDE4_PHEZH Length = 161 Score = 91.3 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 56/154 (36%), Gaps = 22/154 (14%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 VT G + +++ L L + A + + Y ++ Sbjct: 27 NYVTSRGLKLIERALADLDQR-----IAGCEDEAQMAWLRRDQRYWAARR---------- 71 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 N ++V+ SP +V FG V D G +VG DE + +S +P Sbjct: 72 ------ANAQVVE-SPADPDEVAFGTRVTFRKDGGAPETVELVGEDEAEPAQGRLSWVAP 124 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 +ARA++ G+ + T + A+E ++ Sbjct: 125 LARAMIGAMPGETVELETRTPAIRLEILAVEPIR 158 >UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desulfuromonadales RepID=B5EI69_GEOBB Length = 143 Score = 87.1 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 1/106 (0%) Query: 51 NKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYD 109 + + ++ L + L ++VD + + + V +++ D + +V + Sbjct: 28 ARSTQTRDSKNLKELGEELVRAEVVDPAGIPPDVITMNSKVCLQDLDSEEELVYTLVFPN 87 Query: 110 EIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 E ISI +P+ A++ GD P G + V I Y Sbjct: 88 EADLASGKISILAPVGTAMIGFRTGDRITWPVPGGMKNLKVKKILY 133 >UniRef50_A6NYB0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NYB0_9BACE Length = 163 Score = 87.1 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%) Query: 14 LKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLK 73 L+ EL + E A+++GDRSENA++Q + + L L+ K Sbjct: 23 LRTELES-VQLRLKEEQDAAQRASAMGDRSENAEWQIANDNIARYTVSIMSLVNTLDTYK 81 Query: 74 IVDYSPQQEGKVFFGAWVEIENDDGVTHRF-RIVGYDEIFGRKDYISIDSPMARALLKKE 132 S GKV G+ +++ + + + +I + IS +P+ A+L K Sbjct: 82 KFSASYTPTGKVMVGSTLKVVDRRHNSTLYIKIYPAGLGNAKIGAISTATPLGSAVLGKT 141 Query: 133 VGDLAVVNTPAGEASWYVNAI 153 G +V P G+ +Y+ + Sbjct: 142 AGTEVIVKAPLGDIPYYIEEV 162 >UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacteria RepID=A0LL17_SYNFM Length = 141 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 1/96 (1%) Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 ++ L + L ++V V + V +++ D G+ + +V E +++ IS Sbjct: 36 HLQVLEEELRKAEVVAARNIPRDTVTMNSKVRVKDLDTGIETIYHLVFPGEADVKQNRIS 95 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + +P+ AL+ VGD+ N PAG + I Y Sbjct: 96 VLAPIGTALIGYAVGDVIQWNVPAGTKKLRIEEILY 131 >UniRef50_A2VH02 Transcription elongation factor greA (Transcript cleavage factor greA ) (Fragment) n=1 Tax=Mycobacterium tuberculosis C RepID=A2VH02_MYCTU Length = 110 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 2/92 (2%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T+E +++LK EL+ L RP + ++ GD EN Y ++ + + R Sbjct: 5 QVTWLTQESHDRLKAELDQLIAN-RPVIAAEINDRREEGDLRENGGYHAAREEQGQQEAR 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI 93 +R L L N K+ + +P+Q G G+ V++ Sbjct: 64 IRQLQDLLSNAKVGE-APKQSGVALPGSVVKV 94 >UniRef50_UPI0001B58AC8 GreA/GreB family elongation factor n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B58AC8 Length = 148 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 1/92 (1%) Query: 53 KRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIF 112 +R + R+R L L+N +V P +G G + + DDG F + DE+ Sbjct: 38 ERRQHRQARIRQLQDLLQNA-VVGEDPPDDGIAEPGMVLTVRYDDGGVETFLLAARDEVG 96 Query: 113 GRKDYISIDSPMARALLKKEVGDLAVVNTPAG 144 G + S DSP+ RAL + G+ P+G Sbjct: 97 GGLEVYSPDSPLGRALHGAKPGEQREYEVPSG 128 >UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CMB9_9FLAO Length = 139 Score = 84.8 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 45/93 (48%) Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 ++ L L++ KIVD + Q V F + + + +++G + R ++V E KD ISI Sbjct: 35 IQKLLTELDSAKIVDEAEMQNDVVRFHSIITVTSENGWSRRVQLVLPPERDVSKDKISIL 94 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +PM AL GD P+G + +E Sbjct: 95 TPMGIALFGYAEGDTVSWEFPSGPKRLRIEKVE 127 >UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11P04_CYTH3 Length = 149 Score = 84.4 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 1/94 (1%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISID 121 L L+ K+V+ V + V I D F++V D+ + + ISI Sbjct: 46 NSLMNELKLGKLVEPEEIPNNVVTMHSIVTIVFMDSNKRVEFQLVYPDKADVKNNKISIF 105 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+A AL+ ++GD PAG + +I Y Sbjct: 106 SPIATALIGYQIGDEIEWCVPAGMTKIKIESIAY 139 >UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphingobacteriales RepID=C6VSR5_DYAFD Length = 134 Score = 83.2 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 1/94 (1%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISID 121 L L +V+ + G + ++V++ E F IV + K ISI Sbjct: 34 MSLAYELNRAVVVEDNELPAGSIRLNSYVKVRETTTNKEMAFSIVMPKDADIAKQRISIL 93 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +PM AL+ G+ PAG + + + Y Sbjct: 94 TPMGAALIGLCKGETVEWKMPAGIRRFKILDVWY 127 >UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BTE2_TERTT Length = 126 Score = 82.5 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 2/93 (2%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISID 121 L L + +VD G+V FG+ V + D+ F+IV DE + + Sbjct: 30 AELRTRLASATVVDNDDIMGGRVQFGSLVTVFSIDEEEEQSFQIVSSDESLSGRGLLDQR 89 Query: 122 SPMARALLKKEVGDLAVVNTPAGEA-SWYVNAI 153 SP+A+AL G++ V G + V I Sbjct: 90 SPLAQALFGAREGEVVRVLLQNGSNCDYEVTHI 122 >UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1G7_DESAP Length = 154 Score = 81.7 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 4/99 (4%) Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYI 118 RVR L L ++V+ G + +E+ D G + FR+V EI ++ Sbjct: 58 NRVREL---LARARVVEGQCPPLPLTLIGCDIRVEDLDRGHSEMFRVVSPYEINPAAGHV 114 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 S SP+ R LL KE G + V P G + V ++ Y Sbjct: 115 SFLSPVGRGLLLKEPGQVLAVQAPGGTFRYRVVSVTYPA 153 >UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Z9_METFK Length = 138 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 1/95 (1%) Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISI 120 + L L + V V + V + ++ +G +V + + IS+ Sbjct: 34 LARLEDELARSEEVPSEQVGADVVTMNSRVLLRDEANGHEMSCTLVFPSDADASANRISV 93 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +P+ A+L VGD+ P G + + I+Y Sbjct: 94 VAPLGTAILGYRVGDVIDWAMPGGVRQYRILKIDY 128 >UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms RepID=B9NGJ6_POPTR Length = 145 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 2/93 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSP 123 L LE IV + V + V + + + +V D+ +S+ SP Sbjct: 43 LDALLERAAIVSPDAIPKDVVTMNSRVVCALEGEAKPRDWTLVYPDDADLATGRLSVLSP 102 Query: 124 MARALLKKEVGDLAVVNTPAGEAS-WYVNAIEY 155 + +ALL GD P G A + I + Sbjct: 103 IGQALLGARSGDTVDYRLPDGRAQRVTIVEIAF 135 >UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5Q8_FLAB3 Length = 170 Score = 79.0 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR-FRIVGYDEIFGRKDYISIDSP 123 L + L + KIV+ + V + V+I ++ T F+IV ++ + ISI SP Sbjct: 69 LLRELHSAKIVESADIPADVVTMNSVVKIHFENNKTVTEFKIVYPEQANIKDRKISIFSP 128 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +A AL+ V D P+G ++ I Y Sbjct: 129 VAAALIGYSVNDEIDWIVPSGMTKIIIDEIIY 160 >UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella forsetii KT0803 RepID=A0LZA7_GRAFK Length = 146 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 44/98 (44%) Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 + L + L++ +I+ S + + V IE V ++IV ++ RK+ IS Sbjct: 33 ASIYKLNEELKDARILTNSEMPLDVIRLNSLVTIETPYAVERTYQIVTPEKGDIRKNKIS 92 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 + +PM AL GD P GE+ + ++ ++ Sbjct: 93 VLAPMGLALFGYAQGDNITWTFPLGESYIKIKEVKQIE 130 >UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D4X0_PELTS Length = 150 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 1/98 (1%) Query: 58 IDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDG-VTHRFRIVGYDEIFGRKD 116 I+ ++ L + + N + + V G+ VEI+N +++ IV R+ Sbjct: 47 IENYIQRLDRLIRNASKSKIADNKVPFVTIGSEVEIQNLSEQEVYKYFIVNPFYSEVREG 106 Query: 117 YISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +IS SP+ ++LL K+VGD V P G + + +I Sbjct: 107 HISFLSPVGKSLLLKKVGDEVEVKAPGGVFRYKIKSIR 144 >UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Proteobacteria RepID=C5S652_CHRVI Length = 171 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 29/94 (30%), Gaps = 2/94 (2%) Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVT-HRFRIVGYDEIFGRKDYISIDS 122 L L ++VD V + V +V ++ ISI + Sbjct: 68 ELEAELARAEVVDPREMPPNVVSMNSTVRFRVMSTNEAFTLTLVYPKDMDASGGKISILA 127 Query: 123 PMARALLKKEVGDLAVVNTP-AGEASWYVNAIEY 155 P+ ALL GD P G + + Y Sbjct: 128 PVGSALLGLSSGDEIEWPKPGGGVLRVRIEEVTY 161 >UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZU20_OPITP Length = 143 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 1/95 (1%) Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDS 122 L L +VD + + G+ VEIE+ + G + +V ++ +S+ + Sbjct: 31 QLRSELSRGVVVDATALPPTAIRLGSTVEIEDLESGEIETYTLVLPEQANVDARKLSVLA 90 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 P+ A++ G +TP G + + Sbjct: 91 PIGTAVIGCLQGAEVAWSTPGGTRRLRIGRVSPPA 125 >UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=Limnobacter sp. MED105 RepID=A6GQE5_9BURK Length = 122 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 1/90 (1%) Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 L L+N + + V + I E + G T++ + + K YIS+ S Sbjct: 19 ELNAALDNAEFIKPQDIPADVVTMNSLFTIVETESGSTNKLMLCYPSDAEPAKGYISVLS 78 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNA 152 P+ +LL ++ G +A TP GE + V Sbjct: 79 PVGASLLGRKAGTVAQWATPNGEQHFAVVK 108 >UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIL5_9SPHI Length = 129 Score = 77.1 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 1/93 (1%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISID 121 L+ L I+ + + V I+++ G IV ++ IS+ Sbjct: 33 MSLSAELSRAVILSNEEFPSDAIRLNSTVRIQDESTGEIMELIIVLPQHANIKEKKISVL 92 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +P+A AL+ GD PAG ++ + + Sbjct: 93 TPIAAALIGFRQGDAVQWKVPAGLKNFRITEVA 125 >UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SEQ9_LEPBA Length = 138 Score = 76.7 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%) Query: 54 RLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVT-HRFRIVGYDEIF 112 + + D V+ L +E + VD V + +EI+N +G+ FR+V ++ Sbjct: 26 KRNKTDANVQDLLGEIERAQKVDSKQIPSNVVTMNSVIEIKNLEGIEFKEFRLVYPEDSN 85 Query: 113 GRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 ++ ISI +P+A A + + GD+ N P G + + I+Y Sbjct: 86 LDQNQISILAPIATASIGYKTGDVIFWNVPDGVYRFQITEIKY 128 >UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desulfitobacterium hafniense RepID=B8G0E1_DESHD Length = 138 Score = 76.7 bits (188), Expect = 3e-13, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 15/136 (11%) Query: 21 LWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQ 80 + +R + K + G N DY ++ L L +V Sbjct: 7 ITAVDRERLLKLINKEREFGSAK-NKDY-------------LKDLEHELNGADVVPSEKI 52 Query: 81 QEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVV 139 + + + +++ + G + +V ++ +D ISI +P+ A+L GD+ Sbjct: 53 PGNAITMNSRILLKDLETGEETVYTLVYPEDADLLEDKISILAPVGTAILGYLEGDIIDW 112 Query: 140 NTPAGEASWYVNAIEY 155 P G + V I Y Sbjct: 113 KVPGGVVRFKVEKILY 128 >UniRef50_P65095 Uncharacterized protein Rv3788/MT3896 n=17 Tax=Mycobacterium RepID=Y3788_MYCTU Length = 161 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 8/145 (5%) Query: 14 LKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLK 73 L EL L + + +GD + A+ L + R+ L + L Sbjct: 18 LAAELARLRQRRDRLEVEVKNDRGMIGDHGDAAEAIQRADELAILGDRINELDRRLRT-- 75 Query: 74 IVDYSPQQEGKVFFGAW-VEIENDDGVTHRFRIVGYDEIFG---RKDYISIDSPMARALL 129 +P + G V + DG ++ E + ++ SP+ +AL Sbjct: 76 --GPTPWSGSETLPGGTEVTLRFPDGEVVTMHVISVVEETPVGREAETLTARSPLGQALA 133 Query: 130 KKEVGDLAVVNTPAGEASWYVNAIE 154 + GD +TP G + A++ Sbjct: 134 GHQPGDTVTYSTPQGPNQVQLLAVK 158 >UniRef50_A1TEF4 GreA/GreB family elongation factor n=5 Tax=Actinomycetales RepID=A1TEF4_MYCVP Length = 159 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 14/143 (9%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T + E L++EL L P T + + D + K+ R+R + Sbjct: 9 MTPQAREDLEKELADLMAVPNPAGTDETERTDQVVDA-----WLARKE-------RIRQI 56 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + L SP +G G + + +D G T F + + ++ SP+ Sbjct: 57 HELLSRADH-STSPADDGIAEPGMVLTVRFDDTGDTETFLLGTRGTADPELEVYTVASPL 115 Query: 125 ARALLKKEVGDLAVVNTPAGEAS 147 ALL G+ P G Sbjct: 116 GSALLGAVPGEQRSFRLPNGSIQ 138 >UniRef50_B1ZXU0 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXU0_OPITP Length = 204 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 16/160 (10%) Query: 10 GYEK-LKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKC 68 GY + L +E L + +R + A S GD EN ++ K+ +R +DR++ L + Sbjct: 24 GYNRVLAEEFEAL-KVKRAALVLDKIEAHSQGDLRENFGFKAAKEAIRAVDRKMMALDRF 82 Query: 69 LEN--LKIVDYS---PQQEGKVFFGAWVEIENDD---GVTHRFRIV----GYDEIFGRKD 116 + K VD + + + G IE D TH F + G Sbjct: 83 VARNTFKEVDPAAWLTKSTDTLQLGHVTTIEKQDVTTKRTHSFTFLVTTYGETASDPDSG 142 Query: 117 Y--ISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 + SP+A A+L G V PAGE+ + +I Sbjct: 143 LECLPHTSPLATAVLGLAAGAQTKVMLPAGESLLTLISIR 182 >UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9 Tax=Gammaproteobacteria RepID=Q3BX42_XANC5 Length = 146 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 2/91 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSP 123 L+ L +++ V + +E E+ G H +V E + IS+ +P Sbjct: 41 LSDELGRARVLPPDQIPGDVVTMHSRIECEDQLHGERHTLTLVYPHEADVQHGRISVLAP 100 Query: 124 MARALLKKEVGDLAVVNTPAG-EASWYVNAI 153 + ALL VG TP G + V A+ Sbjct: 101 VGSALLGLSVGQSIDWRTPDGRDLRLRVTAV 131 >UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Brucella RepID=A9MBQ4_BRUC2 Length = 169 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 33/84 (39%) Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L L+ K+V E V G+ VE +DG R +V E K+ ISI +P Sbjct: 38 ELMAELDRAKVVTAKRIPENVVQMGSTVEFRANDGHERRVTLVYPGEADIAKNRISILTP 97 Query: 124 MARALLKKEVGDLAVVNTPAGEAS 147 + AL+ G G+ Sbjct: 98 IGTALIGLAPGQSISWTARDGKQH 121 >UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FHU8_FLAJ1 Length = 132 Score = 74.8 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISID 121 L++ L+ I S + + V IE+ + +IV ++ ISI Sbjct: 32 NQLSQELDRAVISKESELDSSVIRINSLVTIEDVKANKQMKIQIVLPSYADVKQSKISIL 91 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +P++ A++ + D PAG + + A++ Sbjct: 92 APLSVAIIGFKENDEVDWELPAGIKTLKIVAVD 124 >UniRef50_Q0BS89 Transcription elongation factor greB n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BS89_GRABC Length = 164 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 17/120 (14%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 LVT G ++ E+ L E V + +R + R +R Sbjct: 28 NLVTLSGLTAIEAEIARLQTALAEEKQSTVEES----------------ERRAVLARDLR 71 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 Y + ++V +P+ +V FG V+++ G T +RIVG DE ++ IS SP Sbjct: 72 YWLARRASAQLVPTAPENAEEVAFGDTVKLKLG-GRTVTYRIVGEDEADPKQGLISYASP 130 >UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Proteobacteria RepID=B8GS58_THISH Length = 137 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 2/95 (2%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISID 121 R L LE +V+ S V + V + +G + +V + G ++ IS+ Sbjct: 33 RQLLAELERANVVEPSQVPPTLVTMNSRVRFRVEPEGREFQRTLVYPSGMDGDEEKISVL 92 Query: 122 SPMARALLKKEVGDLAVVNTPA-GEASWYVNAIEY 155 +P+ ALL VGD TP GE + + I Y Sbjct: 93 APIGSALLGLSVGDSIAWPTPKGGEMNVRIMEILY 127 >UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizobiales RepID=A6X582_OCHA4 Length = 142 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 1/92 (1%) Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L L+ K+V + + G+ VE ++DG R +V E + ISI +P Sbjct: 38 ELMVELDRAKVVPAKRLPQNVIHMGSTVEFRSNDGQERRVTLVYPGEADIAQGKISILTP 97 Query: 124 MARALLKKEVGDLAVVNTPAGEA-SWYVNAIE 154 + AL+ G G+ V ++ Sbjct: 98 IGTALIGLAPGQSISWTARDGKQHELNVLSVS 129 >UniRef50_C1YJ21 Transcription elongation factor n=3 Tax=Actinomycetales RepID=C1YJ21_NOCDA Length = 162 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 49/141 (34%), Gaps = 8/141 (5%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +TRE YE+L++EL L P+ GD Y RV + Sbjct: 9 MTREAYERLREELRTLRA--LPDDDPGTGADRGAGDVLPAPRYI---HDPAVRQARVHTI 63 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKD--YISIDSP 123 + L +VD + +G G + I D ++G + S +SP Sbjct: 64 ERLLSEA-VVDEAAPDDGIAAPGKVLTIRYDGEEEDEVFLLGVRDASVADRMTVYSPESP 122 Query: 124 MARALLKKEVGDLAVVNTPAG 144 + AL+ G+ P G Sbjct: 123 LGAALVGARQGERRTFTAPRG 143 >UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Proteobacteria RepID=A6VVR5_MARMS Length = 137 Score = 73.2 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 2/93 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + + +IV+ + V + V + +V + G +D +S+ +P Sbjct: 35 LQEEINRAEIVEPRDMPDNIVTMNSTVTFKVLSSEKEFSKTLVYPKDANGAEDTVSVLAP 94 Query: 124 MARALLKKEVGDLAVVNTPAGEA-SWYVNAIEY 155 + ALL + GD P G+ S + ++Y Sbjct: 95 VGSALLGLKEGDQIDWPKPNGDVLSVVIMKVDY 127 >UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti RepID=Q930S2_RHIME Length = 140 Score = 73.2 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 36/89 (40%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 L + LE ++ V G+ V E +DG F +V D++ K IS+ + Sbjct: 39 AELIEKLERPCVLPDDQVPPDVVKIGSIVTCEVEDGPCRTFSLVYPDDVDAEKGRISVLT 98 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVN 151 P+ ALL G + G+ + + Sbjct: 99 PVGVALLGLRPGQAVEWFSRDGQRNHLIV 127 >UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betaproteobacteria RepID=B9MBQ3_DIAST Length = 135 Score = 73.2 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L L+ + D V + V + G T+ +V E+ G D +S+ +P Sbjct: 34 LEAELDRADVFDPKDMPPNVVTMNSTVRFTLLETGKTNTLTLVYPKEMDGSGDKVSVFAP 93 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + ALL VGD + +P G+ + V+AI++ Sbjct: 94 VGIALLGLGVGDEFQMPSPTGQVTVRVDAIDF 125 >UniRef50_C4DVL0 Transcription elongation factor n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DVL0_9ACTO Length = 152 Score = 73.2 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 4/152 (2%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+ + L+Q+L R ER V +T + GD ++ A L+ +D R Sbjct: 4 KSAPIGANARHTLEQDLAE-VRAERDRVAATLTDTDTTGDSADQAQELQRVTDLQLLDAR 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 V LT L+ + + V G+ V I D T I ++ + ++ Sbjct: 63 VEKLTARLDASA--TATQGRTDLVDVGSTVTIRFSDDTTETLHIGEIADVD-DQLLVTAG 119 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 SP+ RALL GD NTP+G A+ V ++ Sbjct: 120 SPLGRALLGHRAGDTVSYNTPSGHATAVVESL 151 >UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular organisms RepID=B4RF21_PHEZH Length = 214 Score = 72.8 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 2/92 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + L+ +V + V G+ VE + +V D + +S+ SP Sbjct: 121 LARELDRAIVVREGEKSRPFVRLGSTVEYRDRLTEKVRTVELVPPDAADIDANRLSVLSP 180 Query: 124 MARALLKKEVGDLAVVNTPAG-EASWYVNAIE 154 + ALL VGD P G V A+ Sbjct: 181 VGAALLGLSVGDTFSWTAPDGRPRVVTVEAVR 212 >UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQZ8_BDEBA Length = 138 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 2/93 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + L ++ + V + V+ ++ G +V + + +SI +P Sbjct: 36 LEEELSRANVIAQKEIPKNVVTMNSRVQFLDEVSGQESEMTLVYPQDAKLEEGRLSILAP 95 Query: 124 MARALLKKEVGDLAVVNTPAGE-ASWYVNAIEY 155 + ALL VG P G+ V A+ Y Sbjct: 96 VGIALLGLSVGQEINWKLPNGQSKKLKVQAVTY 128 >UniRef50_A4T6M8 GreA/GreB family elongation factor n=3 Tax=Mycobacterium RepID=A4T6M8_MYCGI Length = 157 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 54/144 (37%), Gaps = 22/144 (15%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 T ++ + E L+QEL L P + +V A + K+ R+ Sbjct: 6 TIWMSPQTRESLEQELAALMAAPGPAGSDEVVDA-----------WLARKE-------RI 47 Query: 63 RYLTKCLENLK-IVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISI 120 R + + L + VD + +G G + + DD G T F + + D S+ Sbjct: 48 RQIHELLTKAEHAVDPA--DDGVAEPGMVLTVRFDDAGDTETFLLGTRATVDSELDVYSV 105 Query: 121 DSPMARALLKKEVGDLAVVNTPAG 144 +SPM ALL G P G Sbjct: 106 NSPMGSALLGATPGQQRSYQLPNG 129 >UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroidetes RepID=A6EMP4_9BACT Length = 139 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 38/98 (38%) Query: 57 EIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKD 116 EI + + L + L+ IVD + F + V I +G F+IV + D Sbjct: 30 EIQKSFKRLNEELKTAIIVDEEEMPTDVIRFNSQVLISTKNGWKKEFQIVSPALKDVKAD 89 Query: 117 YISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 ISI + M AL GD P G+ + + Sbjct: 90 KISILTVMGAALFGYAQGDTVEWEFPTGKNLITIEKVA 127 >UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6F4_9BACT Length = 148 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 48/140 (34%), Gaps = 18/140 (12%) Query: 15 KQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKI 74 +Q+ Y+ R + ++ ++ A EN + L + I Sbjct: 3 EQQPIYISRADLLQIRARLNLIAEGRHDREN----------------LARLRAEFDRALI 46 Query: 75 V-DYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKE 132 + D + +G V V +++ D + + + ISI +P+ ALL + Sbjct: 47 IEDDTAMPDGVVTLHCEVRLQDLDTNEIETYTLTLPEHADPEAHRISILAPIGTALLGYQ 106 Query: 133 VGDLAVVNTPAGEASWYVNA 152 V ++ P G + Sbjct: 107 VDNVVTWEMPGGARRLRILE 126 >UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF63_CELJU Length = 180 Score = 72.1 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 2/92 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + +V + V + V E+ D G ++V + + ISI SP Sbjct: 86 LDIEIGRATLVADAQLPADVVAMDSEVTFEDLDSGEQKTIQLVFPAQANVDQLKISILSP 145 Query: 124 MARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 + AL+ +G P G+ V A++ Sbjct: 146 VGSALIGLRIGSSIDWPVPQGKVRRLKVIAVK 177 >UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=Mesorhizobium RepID=Q98F06_RHILO Length = 140 Score = 71.3 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L ++ + D + V G+ V + + G T R +V E ++ IS+ +P Sbjct: 40 ELLFEMDRAVVTDAAAMPADVVRMGSAVTVRGEGGATQRIMLVYPGEADIAENRISVLTP 99 Query: 124 MARALLKKEVGDLAVVNTPAG-EASWYVNAIE 154 M AL+ +G ++ G E S V A++ Sbjct: 100 MGTALIGASIGQAVCWSSRGGRELSVTVEAVD 131 >UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C278_9PLAN Length = 137 Score = 71.3 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 1/92 (1%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L L IV+ V + V + + + + +V + ++ +SI +P Sbjct: 37 LHAELAVAHIVESEEIPADIVTMNSTVRLRDLETDELETYTLVYPQDANIKEGKLSILTP 96 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + A+L +GD AG + V I + Sbjct: 97 IGTAILGYRIGDQLRSRALAGGSKIRVEEILF 128 >UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltaproteobacteria RepID=Q2LTP9_SYNAS Length = 134 Score = 71.3 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 2/95 (2%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISID 121 R L L N +V V + V E+ G +V + +S+ Sbjct: 30 RSLEAELVNAVVVPSEEMPPDVVTMNSCVCFEDLTTGNRETITLVYPGQANMASGRVSVL 89 Query: 122 SPMARALLKKEVGDLAVVNTPAG-EASWYVNAIEY 155 +P+ AL+ VG P G + + + Y Sbjct: 90 APVGSALIGLSVGQTIEWPMPNGRKRRLRIVEVLY 124 >UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GAI2_SORC5 Length = 140 Score = 71.3 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 1/92 (1%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR-FRIVGYDEIFGRKDYISIDSP 123 L +E +V + V + VE+ + D +V + IS+ +P Sbjct: 39 LEIEIERADVVKPADIPPNVVTMNSRVELVDLDTEERLCVTVVFPGNADVKSGRISVLAP 98 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 M ALL D TP+ + I Y Sbjct: 99 MGLALLGCREADEVEWPTPSRTRRLRIERIAY 130 >UniRef50_UPI0001B57B91 nucleoside diphosphate kinase regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B57B91 Length = 152 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 62/154 (40%), Gaps = 13/154 (8%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 ++ +L++E+ L R +R ++ + GD ++ AD + +DR++ + Sbjct: 9 LSEAARRQLEKEIADL-RAQREALSPQPGEQERTGDAADQADVIDRAEAAARLDRQIADV 67 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGY--DEIFGRKDYISIDSP 123 T LE+ + G V + DG F +V ++ I+ DSP Sbjct: 68 TAKLEH------GAYDSSLLPDGTRVSLRFSDGDEEEFTVVTLPGEDADA----ITSDSP 117 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 + AL + G+ TP G+A+ V + Sbjct: 118 LGLALATAKAGEEISYRTPRGQATATVLKLTPPA 151 >UniRef50_A4FHQ7 Nucleoside diphosphate kinase regulator n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FHQ7_SACEN Length = 162 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 6/154 (3%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 P + E +L++E L + R + ++++ +GDR +++ L D R+ Sbjct: 6 PDLPPEARARLEEEARSLRAQRR-HLAEELSQRDPVGDRGDDSLALEGADELAWYDDRIA 64 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGR---KDYISI 120 L + L + Q + G V + +DG R+VG E ++ Sbjct: 65 ALERRLTGR--GRRAGQGAEGLPPGTEVRVRFEDGTVQELRVVGIPEEVPEGEEDQTMTS 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 DSP+A AL G +TP G A ++ + Sbjct: 123 DSPLALALAGGSAGTDVTYSTPDGPARVHLLDVR 156 >UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74EX3_GEOSL Length = 135 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 1/96 (1%) Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYIS 119 ++ L L + IVD V + V++ + +V ++ + IS Sbjct: 30 DLQKLEDELASAMIVDPKDVPPNVVTMNSRVKLRDLRADKEMTISLVFPNDANIAEGKIS 89 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 I SP+ A+L GD + + + + Y Sbjct: 90 ILSPIGTAILGFGAGDTLDLAVRSFAKKIRIEEVLY 125 >UniRef50_UPI0001AEE145 nucleoside diphosphate kinase regulator n=1 Tax=Streptomyces albus J1074 RepID=UPI0001AEE145 Length = 160 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 5/155 (3%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAA-SLGDRSENADYQYNKKRLREIDRRVR 63 ++ L+QEL R ER V + GDR + AD L +D R+ Sbjct: 7 PISAAARHALEQELAD-VRAERETVAATLQDPDIVAGDRGDAADQLQRSGDLARLDARIE 65 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 +T L D P G V G+ V + DDG I G ++ DSP Sbjct: 66 DITTRLRQAD--DAGPPPAGVVGVGSTVTVRFDDGAEQTVSI-GEVTQGYDASLVTADSP 122 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 + +AL+ GD TP GEA V ++ P Sbjct: 123 LGKALMGCRPGDAVRYRTPDGEAGAVVVSLGGAPP 157 >UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746B72 Length = 137 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 12/126 (9%) Query: 32 KVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIV-DYSPQQEGKVFFGAW 90 + + D + + ++R I+ L++ K+ D S + Sbjct: 13 DLHTLRTFLDHDDAFNPLDARERSLLIE--------RLQDAKVFEDESDDEPSVAGLQTL 64 Query: 91 VEIENDDG---VTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEAS 147 V +E+ F +V E D ISI SP+ A+ + G V+++P G Sbjct: 65 VRVEDLSTSPPDQFDFTLVLPHEANFEDDQISILSPLGAAVFGRSAGTQVVMDSPTGTRR 124 Query: 148 WYVNAI 153 V A+ Sbjct: 125 LLVLAV 130 >UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae RepID=C6WYK0_METML Length = 125 Score = 69.4 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 2/92 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSP 123 L L +V V + V ++ G++ +V + + IS+ SP Sbjct: 26 LGDELSRAIVVPADQVPADVVRINSRVIYLDESSGLSREVELVFPEGADLKFGKISVLSP 85 Query: 124 MARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 + ALL + G + P G+ V ++ Sbjct: 86 VGSALLGLKEGQVIDWPFPHGQSRRLKVVSVA 117 >UniRef50_A5VFW5 GreA/GreB family elongation factor n=3 Tax=Sphingomonadaceae RepID=A5VFW5_SPHWW Length = 157 Score = 69.4 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 3/83 (3%) Query: 53 KRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIF 112 ++L+ + R +RY T ++I P + FG V +G IVG DE Sbjct: 59 EQLKSLKRDLRYWTTRHATMEI--QPPADGDEAAFGTRVRYR-LNGQEKAVAIVGDDEAD 115 Query: 113 GRKDYISIDSPMARALLKKEVGD 135 +S SP+ARAL+ GD Sbjct: 116 PAAGLVSFSSPLARALIGAGEGD 138 >UniRef50_D1SYS0 GreA/GreB family elongation factor n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SYS0_9BURK Length = 139 Score = 69.0 bits (168), Expect = 5e-11, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 31/88 (35%), Gaps = 5/88 (5%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-----DGVTHRFRIVGYDEIFGRKDY 117 L L + V + VE+E DG + + Sbjct: 31 ASLADLLATADVTGSRAVDADVVTMNSRVELEGSGTDGADGARQVLTLCYPQDADAAAGR 90 Query: 118 ISIDSPMARALLKKEVGDLAVVNTPAGE 145 +S+ SP+ +LL VGD+A TP GE Sbjct: 91 VSVLSPVGCSLLGLRVGDVAAWRTPQGE 118 >UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteobacteria RepID=Q5P744_AZOSE Length = 158 Score = 68.2 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 1/85 (1%) Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDS 122 L LE +V V + V ++ G ++V +E +S+ + Sbjct: 57 QLRAELERAVVVPPDFLPRHVVTMHSRVRYLDEASGEQREIQVVYPEEADVAAGKVSVFA 116 Query: 123 PMARALLKKEVGDLAVVNTPAGEAS 147 P+ ALL V + + P G Sbjct: 117 PVGAALLGLSVDQVIEWDFPRGPRR 141 >UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain protein n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XWY5_PEDHD Length = 125 Score = 67.8 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 1/90 (1%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L L+ I V + I N G F++V +E + +S+ +P Sbjct: 33 LQAELKAATIYTEEELPSDVVCLKSEARIANVKTGKEFTFKLVMPEEANIKAQKVSVFAP 92 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAI 153 + AL GD P G + + + Sbjct: 93 IGIALFGYRTGDSINWEMPDGIQEFKILEV 122 >UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Bradyrhizobiaceae RepID=Q3SU57_NITWN Length = 151 Score = 67.4 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 54/155 (34%), Gaps = 24/155 (15%) Query: 18 LNYLWREERPEVTKKVTWAASLGDRSENA--DYQYNKKRLREIDRRVRYLTKCLENLKIV 75 L+ L + P + L +E A Y + +L + ++ +I+ Sbjct: 2 LDNLKKTHLPAIAISAHDIDRLRHLAEAAIEKYPATAE----------FLAREIDRAEII 51 Query: 76 --DYSPQQEGK--------VFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSPM 124 D S + + V + V +D G R +V ++ ISI SP+ Sbjct: 52 PADGSLLDDTRDQRWKVNLVTMQSEVTFIDDVSGQKRRVTLVYPEDADVDAGKISILSPI 111 Query: 125 ARALLKKEVGDLAVVNTPAGE-ASWYVNAIEYVKP 158 AL+ G TP+G S V A+ P Sbjct: 112 GAALIGLSAGQSIEFQTPSGGWRSLTVIAVWSYWP 146 >UniRef50_C0ZE34 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE34_BREBN Length = 164 Score = 67.0 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 9/112 (8%) Query: 50 YNKKRLRE---IDRRVRYLTKCLENLKIVDYSPQQEGKVF--FGAWVEIENDDGV-THRF 103 Y K++ +DR + L L D + Q K G+ V++ ++ F Sbjct: 47 YGKEKQAIDEIVDRYKQTLESLLAKE---DSALFQSLKAITLLGSSVKVLFEEDQFEESF 103 Query: 104 RIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +V +I + IS SP+ R LL D V+ +P G V I + Sbjct: 104 TVVYPTDIDPDNNRISFLSPIGRQLLLAAPHDSVVLESPVGRQQVQVREISF 155 >UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burkholderia RepID=Q13WN5_BURXL Length = 136 Score = 65.5 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 37/100 (37%), Gaps = 3/100 (3%) Query: 59 DRRVRY-LTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKD 116 D R++ L LE IVD V + + ++ G + +V Sbjct: 27 DARLQDMLDDVLERAVIVDSHEIPANVVTMNSQATLVDETSGEHMTWTVVYPPNADFAHG 86 Query: 117 YISIDSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIEY 155 +++ SP ALL + G+ P+G E + I + Sbjct: 87 RLNVFSPAGLALLGAKRGERIRFTPPSGTEKVLKLEKILF 126 >UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Z69_PSEA6 Length = 128 Score = 65.1 bits (158), Expect = 7e-10, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 1/113 (0%) Query: 43 SENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTH 101 ++ A+ +Y +R + D +R + L+ IV E V G+ V + D Sbjct: 12 ADLAELEYQLERSKLPDDAIRAIENELDRATIVACKDLPENVVAIGSQVTFKILDSQKVF 71 Query: 102 RFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 + + +D IS+ +P+ AL+ G T G+ S + +E Sbjct: 72 TKALCLPHDSVKFEDSISVFAPIGSALIGLSTGQCIKWQTQRGQQSVEIIKVE 124 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Pr... 181 9e-45 UniRef50_P64276 Transcription elongation factor greA n=48 Tax=de... 179 3e-44 UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Pr... 178 4e-44 UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Pr... 177 8e-44 UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria R... 176 2e-43 UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=P... 176 2e-43 UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfob... 176 2e-43 UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Pr... 176 3e-43 UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Ba... 175 4e-43 UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erw... 174 6e-43 UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Prote... 174 8e-43 UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syn... 174 9e-43 UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Des... 173 2e-42 UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangi... 173 2e-42 UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=B... 173 2e-42 UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Ri... 170 1e-41 UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Pro... 170 1e-41 UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Cl... 170 1e-41 UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Ba... 170 1e-41 UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clo... 169 2e-41 UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Ga... 169 3e-41 UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Ga... 169 3e-41 UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=c... 168 4e-41 UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cell... 168 5e-41 UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Ga... 168 6e-41 UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Pro... 168 7e-41 UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylob... 167 9e-41 UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Pr... 167 1e-40 UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bac... 167 1e-40 UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syn... 166 2e-40 UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylob... 166 2e-40 UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myx... 166 2e-40 UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehaloco... 165 3e-40 UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pir... 165 4e-40 UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultur... 165 4e-40 UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergis... 164 5e-40 UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus ... 164 6e-40 UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Pla... 164 1e-39 UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiother... 164 1e-39 UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gam... 163 2e-39 UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chl... 163 2e-39 UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Ba... 163 2e-39 UniRef50_UPI00016C498C transcription elongation factor greA n=1 ... 162 3e-39 UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neo... 162 3e-39 UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuoke... 161 4e-39 UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostrid... 161 5e-39 UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteob... 161 7e-39 UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cel... 161 9e-39 UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultur... 161 9e-39 UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria... 159 2e-38 UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Ba... 159 2e-38 UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Ricketts... 159 3e-38 UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Pr... 158 4e-38 UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobac... 158 7e-38 UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Fi... 157 8e-38 UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicut... 157 9e-38 UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Deh... 156 2e-37 UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacter... 156 3e-37 UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Ba... 156 3e-37 UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibro... 156 3e-37 UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Pr... 155 5e-37 UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 ... 155 5e-37 UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidat... 154 9e-37 UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chrom... 154 9e-37 UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerob... 154 1e-36 UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veill... 153 1e-36 UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Pro... 153 1e-36 UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrob... 153 2e-36 UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=The... 153 3e-36 UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Sti... 152 3e-36 UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotel... 152 4e-36 UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobac... 152 4e-36 UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=De... 151 8e-36 UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Ba... 151 9e-36 UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostrid... 150 2e-35 UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 ... 149 2e-35 UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=The... 149 3e-35 UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Pr... 149 3e-35 UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clo... 149 4e-35 UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotr... 149 4e-35 UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylob... 148 6e-35 UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobac... 148 7e-35 UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia ... 148 8e-35 UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctom... 147 9e-35 UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococ... 147 1e-34 UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellu... 147 1e-34 UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Hal... 147 1e-34 UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobac... 146 2e-34 UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 ... 146 2e-34 UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Prote... 146 2e-34 UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachysp... 146 2e-34 UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroi... 145 5e-34 UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acido... 145 5e-34 UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia ... 145 6e-34 UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Pol... 144 1e-33 UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Myc... 144 1e-33 UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria... 144 1e-33 UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntr... 143 2e-33 UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Act... 143 2e-33 UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Bo... 143 2e-33 UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteri... 143 2e-33 UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinse... 143 3e-33 UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mol... 141 5e-33 UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Myc... 141 6e-33 UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobac... 141 1e-32 UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospi... 141 1e-32 UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinop... 140 1e-32 UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 ... 140 1e-32 UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=La... 140 2e-32 UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Myc... 140 2e-32 UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chtho... 140 2e-32 UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=L... 139 2e-32 UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostrid... 138 4e-32 UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostri... 138 5e-32 UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacte... 138 6e-32 UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Saliniba... 137 9e-32 UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Myc... 137 1e-31 UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipel... 137 1e-31 UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Aci... 136 2e-31 UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidi... 136 2e-31 UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothe... 136 2e-31 UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax... 135 4e-31 UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusi... 135 4e-31 UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Ach... 135 5e-31 UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Ba... 135 5e-31 UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Th... 134 7e-31 UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacte... 134 7e-31 UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Tre... 133 1e-30 UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Acti... 133 2e-30 UniRef50_B3DVF3 Transcription elongation factor GreA fused to un... 133 2e-30 UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermoba... 133 2e-30 UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verru... 132 4e-30 UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=F... 132 4e-30 UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 ... 130 1e-29 UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candida... 129 2e-29 UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Myc... 129 3e-29 UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methy... 129 3e-29 UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bactero... 129 4e-29 UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bi... 129 4e-29 UniRef50_UPI0001746370 transcript cleavage factor/unknown domain... 128 6e-29 UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pse... 128 7e-29 UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Co... 127 1e-28 UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostri... 127 1e-28 UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia m... 127 2e-28 UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victi... 127 2e-28 UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisp... 126 2e-28 UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Ac... 126 2e-28 UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachl... 126 2e-28 UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Ch... 126 3e-28 UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chtho... 126 3e-28 UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomy... 125 4e-28 UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaer... 125 4e-28 UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxa... 123 2e-27 UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9... 123 2e-27 UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Co... 123 2e-27 UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Fi... 122 3e-27 UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitu... 122 3e-27 UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akker... 122 3e-27 UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bif... 122 4e-27 UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 T... 122 4e-27 UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ur... 121 1e-26 UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodo... 120 1e-26 UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh... 120 1e-26 UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB famil... 119 3e-26 UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobac... 117 8e-26 UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exigu... 117 8e-26 UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Fla... 117 1e-25 UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clost... 117 1e-25 UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostrid... 116 2e-25 UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromon... 116 4e-25 UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desul... 113 2e-24 UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spiro... 113 2e-24 UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Ta... 112 4e-24 UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophag... 112 5e-24 UniRef50_Q88Q22 Transcription elongation factor, putative n=11 T... 112 5e-24 UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobac... 111 6e-24 UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bac... 111 8e-24 UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gem... 110 2e-23 UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methy... 109 2e-23 UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococ... 108 5e-23 UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9 T... 108 5e-23 UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cell... 108 6e-23 UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Prote... 107 8e-23 UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betap... 107 8e-23 UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltapro... 107 1e-22 UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=... 107 1e-22 UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deino... 106 2e-22 UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacte... 106 2e-22 UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax... 106 3e-22 UniRef50_C6UNA6 Putative transcription elongation factor GreA n=... 106 3e-22 UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobac... 106 4e-22 UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphin... 104 9e-22 UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospi... 104 1e-21 UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desul... 103 2e-21 UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=unc... 103 2e-21 UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Bruc... 103 2e-21 UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococ... 103 2e-21 UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizo... 102 5e-21 UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, famil... 102 5e-21 UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deino... 101 6e-21 UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Prot... 101 6e-21 UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 T... 101 9e-21 UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax... 100 1e-20 UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/G... 100 2e-20 UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms Re... 100 2e-20 UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=... 100 2e-20 UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhi... 100 2e-20 UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Brady... 100 2e-20 UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 T... 100 2e-20 UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betap... 99 3e-20 UniRef50_A1TEF4 GreA/GreB family elongation factor n=5 Tax=Actin... 99 4e-20 UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Prot... 99 4e-20 UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteoba... 99 6e-20 UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein,... 98 8e-20 UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella... 98 9e-20 UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteob... 98 1e-19 UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 T... 98 1e-19 UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitu... 97 2e-19 UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candi... 97 2e-19 UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 T... 97 2e-19 UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochro... 96 3e-19 UniRef50_C7MX98 Transcription elongation factor n=1 Tax=Saccharo... 96 3e-19 UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 T... 96 3e-19 UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Ba... 96 4e-19 UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methy... 96 5e-19 UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain... 95 5e-19 UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alph... 95 5e-19 UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroi... 95 7e-19 UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitu... 95 7e-19 UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein,... 95 8e-19 UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=... 95 9e-19 UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acine... 94 9e-19 UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein,... 94 1e-18 UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavo... 94 1e-18 UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphin... 94 1e-18 UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155... 93 2e-18 UniRef50_A4T6M8 GreA/GreB family elongation factor n=3 Tax=Mycob... 93 3e-18 UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bact... 93 3e-18 UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methy... 93 4e-18 UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizo... 91 8e-18 UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular... 91 1e-17 UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalo... 91 1e-17 UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseud... 91 1e-17 UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methy... 91 1e-17 UniRef50_Q5QX12 Transcription elongation factor family protein n... 91 1e-17 UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Ocean... 91 2e-17 UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotom... 90 3e-17 UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novos... 90 3e-17 UniRef50_B2SQJ5 Regulator of nucleoside diphosphate kinase n=8 T... 89 5e-17 UniRef50_P65095 Uncharacterized protein Rv3788/MT3896 n=17 Tax=M... 89 5e-17 Sequences not found previously or not previously below threshold: >UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Proteobacteria RepID=GREA_BAUCH Length = 158 Score = 181 bits (459), Expect = 9e-45, Method: Composition-based stats. Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 2/158 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +T G E+L++ELNYL RPE+ + + A GD ENA+Y +++ + Sbjct: 1 MNQIPMTLRGAEQLREELNYLKNVRRPEIIRNIAEAREYGDLKENAEYHAAREQQGFCEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQ-QEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYI 118 R++ + L + +I+D + GKV FG V ++N + +RIVG DE + + I Sbjct: 61 RIQEIESKLSHAQIIDVTKLFPSGKVVFGVTVSVQNLNINEEQTYRIVGDDEANFKHNLI 120 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 SI SP+AR L+ K+ GD+ ++ TP GE + + IEY+ Sbjct: 121 SISSPIARGLIGKKKGDIVLIKTPRGEVKYQILKIEYL 158 >UniRef50_P64276 Transcription elongation factor greA n=48 Tax=delta/epsilon subdivisions RepID=GREA_HELPJ Length = 164 Score = 179 bits (454), Expect = 3e-44, Method: Composition-based stats. Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M ++ GY K+ EL L ERP + K++ A GD ENA+Y K++ R I+ Sbjct: 1 MNKEPMSMHGYNKICAELKQLKEVERPNIVKEIDIARGHGDLKENAEYHAAKEKQRFIEA 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R+ L++ + N +++D S KV FG+ ++I N D+ + IVG E K IS Sbjct: 61 RIVDLSEIVANAQVIDPSALAHNKVSFGSTIKILNLDNDKEFSYTIVGSVESDPAKGLIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+A++L+ K GD + P GE+ + + I Y Sbjct: 121 FGSPIAKSLIGKSKGDAVSIQLPNGESDFEILDIYY 156 >UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Proteobacteria RepID=GREB_HAEDU Length = 162 Score = 178 bits (453), Expect = 4e-44, Method: Composition-based stats. Identities = 92/154 (59%), Positives = 122/154 (79%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+ +TR G++ L QEL YLW+EERP+VT+ V+ AA+LGDRSENA+Y Y K+RLREIDRR Sbjct: 3 KSNYITRAGWQALDQELKYLWKEERPKVTQSVSEAAALGDRSENAEYIYGKRRLREIDRR 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 +R+L+K LE L+I+DY PQQ GKVFFGAW+E+EN++G +++RIVG DE K++ISID Sbjct: 63 IRFLSKRLEALQIIDYHPQQAGKVFFGAWIELENNEGEINQYRIVGCDEFDPTKNWISID 122 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ARAL+ K V D V TP G+A +Y+N I Y Sbjct: 123 SPVARALIGKCVDDEIEVQTPTGKAVFYINKIWY 156 >UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Proteobacteria RepID=GREA_GEOLS Length = 158 Score = 177 bits (450), Expect = 8e-44, Method: Composition-based stats. Identities = 55/153 (35%), Positives = 82/153 (53%), Gaps = 1/153 (0%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +T+E YE L++EL L REERP+V + + A S GD SENA+Y K R I+ R++ Sbjct: 5 IPLTKESYEALQEELKRLIREERPKVIQDIAEARSHGDLSENAEYDAAKNRQGFIEGRIQ 64 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDS 122 L L +VD + + KV FGA V + + ++IVG DE + IS S Sbjct: 65 ELQGKLARAHVVDLTGLKPDKVVFGATVTLYDTASEEEITYKIVGEDEADIKLGKISCTS 124 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 P+ +AL+ ++ D V PAG + + I+Y Sbjct: 125 PVGKALIGHKLDDSVKVKVPAGTKEYEIIEIKY 157 >UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria RepID=D0J5N8_COMTE Length = 231 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 71/157 (45%), Positives = 98/157 (62%), Gaps = 1/157 (0%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 +T +GY+++K EL L ERP++ + V WAAS GDRSEN DY Y KKRLREIDRR+ Sbjct: 71 KNYITPQGYQRIKDELLDLIDNERPKIVEIVHWAASNGDRSENGDYLYGKKRLREIDRRI 130 Query: 63 RYLTKCLENLKIVDYS-PQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 R+LTK LE ++VD + +VFFGA V +D+GV I+G DE ++ +S Sbjct: 131 RFLTKRLEIAEVVDPAVHAGSDQVFFGATVSYVDDEGVERTITIMGIDEADSAQNQVSWI 190 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 +P++RALLK VGD + TPAG + + Y +P Sbjct: 191 APVSRALLKARVGDEVALPTPAGVRMLEILDVSYPQP 227 >UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=Proteobacteria RepID=GREB_YERPE Length = 171 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 93/154 (60%), Positives = 117/154 (75%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+ +TREG++ L +EL+YLWREERP VT+ V+ AA++GDRSENA+Y Y KKRLREIDRR Sbjct: 3 KSNYITREGWQALDRELHYLWREERPVVTQAVSEAAAMGDRSENAEYIYGKKRLREIDRR 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 VR+L K LE LKIVD P+QEGKVFFGAWV +EN+ FR+VG DE K +ISID Sbjct: 63 VRFLAKRLEVLKIVDPDPRQEGKVFFGAWVRVENEQEEQRIFRLVGPDEFDPAKKWISID 122 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ARAL+ K+V D V TP GEA++++ I Y Sbjct: 123 SPVARALIGKQVDDEVTVQTPNGEATYWILEIRY 156 >UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKN0_DESAH Length = 175 Score = 176 bits (446), Expect = 2e-43, Method: Composition-based stats. Identities = 55/153 (35%), Positives = 80/153 (52%), Gaps = 1/153 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T EGY LK+EL L ERP+ K + A + GD SENA++ K R I+ R Sbjct: 22 DQIPITIEGYAALKEELQRLKTIERPQNIKAIEIARAHGDLSENAEFDAAKDRQSFIEGR 81 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L + + KI+D + + V F + V IEN D G + IVG +E K IS+ Sbjct: 82 IGELGYKIASAKIIDPATVSKDCVRFASRVVIENLDSGEEVEYMIVGQEESDIHKGKISV 141 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 SP+ ALL K+ GD V+ P G+ ++ + I Sbjct: 142 SSPLGMALLGKQPGDEIVIQAPGGKRNYEIVDI 174 >UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Proteobacteria RepID=GREA_ALHEH Length = 158 Score = 176 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 54/157 (34%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +T G EKL++EL L ERP + + + A GD ENA+Y +++ ++ Sbjct: 1 MSKVPLTARGAEKLREELQRLKTVERPRIIQAIAEAREHGDLKENAEYHAAREQQSFVEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQE-GKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYI 118 R++ + L N +++D + GKV FGA V++ ++D G ++IVG DE ++ + Sbjct: 61 RIQEIEGKLSNAQVIDPAAVNAQGKVIFGATVDLVDEDSGKEVTYQIVGEDEADIKQGLV 120 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 S++SP+ARAL+ KE GDL V P GE + + + Y Sbjct: 121 SVNSPIARALIGKEEGDLVTVQAPGGEREYEIVEVRY 157 >UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Bacteria RepID=GREA_BRUA1 Length = 157 Score = 175 bits (444), Expect = 4e-43, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 1/157 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ +T G+EKLK+EL + + ERP + + + A + GD SENA+Y K+ + Sbjct: 1 MEKFPMTPRGFEKLKEELRWRQQSERPRIIEAIAEARAHGDLSENAEYHAAKEAQSLNEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR-FRIVGYDEIFGRKDYIS 119 R+ L + +++D S ++ FGA V + ++D + ++IVG E ++ IS Sbjct: 61 RINELEDLVARAEVIDVSKLTGDRIKFGATVTMIDEDTEEEKIYQIVGDQEADVKEGRIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 I SP+ARAL+ K GD VN P G S+ + A+++V Sbjct: 121 ISSPIARALIGKGEGDTIEVNAPGGSRSYEIIALKFV 157 >UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erwinia RepID=D2T9B8_ERWPY Length = 187 Score = 174 bits (443), Expect = 6e-43, Method: Composition-based stats. Identities = 135/156 (86%), Positives = 142/156 (91%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 MKT L+TREGY LKQEL++LWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR Sbjct: 29 MKTKLITREGYNLLKQELDFLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 88 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 RVRYLTKCLE L+IVDYSPQQ+GKVFFGAWVE+ENDDG RFRIVGYDEIFGR DYISI Sbjct: 89 RVRYLTKCLEQLRIVDYSPQQDGKVFFGAWVEVENDDGDIKRFRIVGYDEIFGRNDYISI 148 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 DSPMARALLKKEVGD A V TPAGEA WY+N I YV Sbjct: 149 DSPMARALLKKEVGDAATVFTPAGEALWYINDISYV 184 >UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Proteobacteria RepID=Q1H0G6_METFK Length = 165 Score = 174 bits (442), Expect = 8e-43, Method: Composition-based stats. Identities = 78/159 (49%), Positives = 104/159 (65%), Gaps = 2/159 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T EGY +LK E L++ ERP+V V WAAS GDRSEN DY Y KKRLR+ID R Sbjct: 4 QKNYITPEGYARLKDEFEQLYKVERPKVVSDVAWAASNGDRSENGDYIYGKKRLRQIDSR 63 Query: 62 VRYLTKCLENLKIVDYSPQQE-GKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYIS 119 +R+L K ++ +VD + QQ+ K++FGAWVE+ + D H +RIVG DE+ K YIS Sbjct: 64 LRFLMKRMDIAVVVDPAQQQDLEKIYFGAWVELYSIDKDSEHHYRIVGQDELDPGKGYIS 123 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 SP+ARALL K+ GD+ V TPAGE + + + Y P Sbjct: 124 WISPLARALLGKQPGDVIRVETPAGEERFEIVDVSYHPP 162 >UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syntrophus aciditrophicus SB RepID=GREA_SYNAS Length = 161 Score = 174 bits (441), Expect = 9e-43, Method: Composition-based stats. Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 2/159 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ +T+ G+E LK+EL +L P K + A + GD SENA+Y K++ + Sbjct: 1 MEKMPITKSGFENLKKELEHLKCVLIPANIKDIEIARAHGDLSENAEYTAAKEKQSFLHG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 +++ L L ++D + ++ FGA V IE G +++VG E ++ IS Sbjct: 61 KLQELENNLALSNVIDLKMLSDDRIVFGATVIIEEASTGKQTNYQLVGPFESNISENKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 + SP+ +AL+ K +GD V+TP G ++ V I Y+ P Sbjct: 121 VTSPIGKALIGKSIGDEVKVHTPGGIRNFEVVDI-YINP 158 >UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Desulfovibrionaceae RepID=GREA_DESVH Length = 163 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 91/157 (57%), Gaps = 2/157 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M + ++ EG+++L++EL+ L + ERP V + + A GD SENA Y ++R ++ Sbjct: 1 MSSIPISVEGFKQLEKELDRLKK-ERPGVIQAIKEAREEGDLSENAGYDAARERQGMLEA 59 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R++Y+ + ++D KV FGA V+IE+ + G + ++G DE K IS Sbjct: 60 RIKYIESRMAQFNVIDLDTISGDKVMFGATVKIEDLESGEEKEYTLLGPDEADYAKGSIS 119 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 + SP+ARA+L KE GD VV+ P G+ + + +I ++ Sbjct: 120 VQSPVARAMLGKEEGDEIVVDAPRGKIHYEIVSIRFL 156 >UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKY5_HALO1 Length = 169 Score = 173 bits (438), Expect = 2e-42, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 1/157 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T G+ +K +L L +RP K + A GD SENADY K+ I+ R Sbjct: 3 DKFPMTPSGHAWMKAQLKKLKEVDRPANAKAIEVARGHGDLSENADYDAAKEEQGMIEAR 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 +R L +++D + +V FGA V +E+ D G + IVG E + IS+ Sbjct: 63 IREYEAKLALSEVIDPTKLSGERVKFGATVTVEDIDTGDEATYTIVGEHEADIKNKRISV 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 +P+ARAL+ K +GD V TP G ++ + ++++ Sbjct: 123 TAPVARALIGKAIGDETQVQTPKGTRAFEIVDVKWLP 159 >UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=Bacteria RepID=GREA_ANASK Length = 166 Score = 173 bits (438), Expect = 2e-42, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 91/158 (57%), Gaps = 1/158 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ +T+ G +LK EL L ERP++ K++ A + GD SENA+Y K++ I+ Sbjct: 1 MQRVPMTKGGLVRLKDELRRLKSVERPKIVKEIAEARAHGDLSENAEYHAAKEKQSHIEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R+ + + + +++D + +V FGA V +E+ + G +RIVG E ++ IS Sbjct: 61 RIAQVEHWIASAEVIDVTKHAGDRVVFGATVSLEDAESGDQVTYRIVGELEADLKQGKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 + SP+ARAL+ + GD VV +P GE + + ++ +V+ Sbjct: 121 VTSPIARALIGRSEGDTVVVRSPGGEKEYEIQSVAFVE 158 >UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Rickettsia RepID=GREA_RICCK Length = 162 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 1/154 (0%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 +T +G++KL+ EL +L ER ++++ + A GD SENA+Y+ +++ I+ R+ Sbjct: 4 KFPITAKGFKKLEHELKHLKHVERKKISEDIAEAREHGDLSENAEYEAAREKQAFIEGRI 63 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTH-RFRIVGYDEIFGRKDYISID 121 + L +I+D S + FGA V + +DD + +VG E + +SI Sbjct: 64 KELEDMAARAEIIDISKLSGDNIKFGATVTLIDDDTEEKVTYIVVGEYEADITRKRVSIA 123 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+A+AL+ K VGD V TP G S+ V +EY Sbjct: 124 SPIAKALIGKSVGDFVEVTTPKGSKSYEVVEVEY 157 >UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Proteobacteria RepID=GREA_AZOC5 Length = 157 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 1/157 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ +T G+ L++EL + + ERP + ++ A + GD SENA+Y K+ + Sbjct: 1 MEKIPMTGAGFVALEEELRFRQQVERPRIISAISEARAHGDLSENAEYHAAKELQSLNEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR-FRIVGYDEIFGRKDYIS 119 R+ L + +++D S V FGA V + ++D R ++IVG E + IS Sbjct: 61 RIAELEDKISRAEVIDVSKLSGDIVKFGATVTLVDEDTEEERVWQIVGDSEADAKAGRIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 I SP+ARAL+ K+ G V TP G S+ + + + Sbjct: 121 ISSPVARALIGKKKGSSVEVVTPKGARSFEIVEVRWA 157 >UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Clostridia RepID=GREA_CLOB8 Length = 160 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T EG +KL+ EL YL +R E+T+K+ A GD SEN++Y K + R Sbjct: 5 KQYVMTYEGVKKLESELEYLKTVKRKEITEKIKIALGYGDLSENSEYDEAKNDQAFTEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L L+N +VD S V G+ V++++ + + IVG E IS Sbjct: 65 IIQLENMLKNAVVVDESEIPSDIVSVGSKVKVKDYEFDEEVEYSIVGSAEADPMNFKISN 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ AL+ K+VGD+ V P G + + I Sbjct: 125 ESPVGNALVGKKVGDVVEVTVPDGVNKFEILGIS 158 >UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Bacteria RepID=GREA_LISW6 Length = 160 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K +T EG KL+ EL L +R EV +++ A S GD SEN++Y K ++ R Sbjct: 5 KVFPMTLEGKAKLENELQELKTVKRKEVVERIKIARSFGDLSENSEYDSAKDEQAFVEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVE-IENDDGVTHRFRIVGYDEIFGRKDYISI 120 + + + N +I+D + G V G V IE DG + IVG E + IS Sbjct: 65 ITTIENMIRNAQIIDAAEAHNGLVTLGNTVTFIELPDGEEETYTIVGSAEADPFEGKISN 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 DSP+A+ LL + G+ + TPAG+ + + I Sbjct: 125 DSPIAKGLLGHKEGEEVTIQTPAGDMNVKIEKIT 158 >UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clostridiales RepID=GREA_CLOAB Length = 158 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T +G +KL++EL YL +R E+T+K+ A S GD SEN++Y K ++ R Sbjct: 5 KKYVITYKGVKKLEEELEYLKTTKRKEITEKIKVALSFGDLSENSEYDEAKNDQAFVEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + + L+N ++D S + V G+ V +++ F IVG E ++ IS Sbjct: 65 IAQIENMLKNANVIDESELKNDVVSVGSKVMVKDYQFDEEIEFSIVGSAEADPIENKISN 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ AL+ K+VGD VN P G + + AI+ Sbjct: 125 ESPVGSALIGKKVGDEIEVNVPDGVDKYKILAIK 158 >UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Gammaproteobacteria RepID=GREB_PSEPK Length = 162 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 117/155 (75%), Positives = 136/155 (87%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M T ++T EG+E LK+EL++LWR RPE+T+KV WAASLGDRSENADYQYNKK LREIDR Sbjct: 1 MSTNIITTEGHEALKKELDHLWRVYRPEITQKVAWAASLGDRSENADYQYNKKLLREIDR 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 RVRYL K LE++K+V YSP+QEGKVFFGAWVEIEND+G T +FRIVGYDEI+GR DYISI Sbjct: 61 RVRYLRKRLEDVKVVAYSPEQEGKVFFGAWVEIENDEGETMKFRIVGYDEIYGRNDYISI 120 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 DSPMARALLKKE GD VV+TP GEA+WYV++I Y Sbjct: 121 DSPMARALLKKEEGDEVVVHTPTGEATWYVSSIRY 155 >UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Gammaproteobacteria RepID=A6W1U9_MARMS Length = 196 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 83/154 (53%), Positives = 109/154 (70%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+ +T+EG + L EL YLW+E+RP VT+ V AA+ GDRSENA+Y Y KK+LREIDRR Sbjct: 38 KSAYITQEGAQALLAELKYLWKEKRPAVTETVREAAAQGDRSENAEYIYGKKQLREIDRR 97 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 VRYL K LE +VD P + +VFFGAWV +E++ G +RIVG DE+ YISID Sbjct: 98 VRYLEKRLEVCTVVDRFPSDQERVFFGAWVTLEDEAGNLKEYRIVGPDELDHHSSYISID 157 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ARALLKK+ GD V+ GE ++ ++A+EY Sbjct: 158 SPVARALLKKQEGDEVVIRLAGGEKTYIIDAVEY 191 >UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=cellular organisms RepID=GREA_BACCR Length = 158 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 KT +T+EG +KL+ EL L R EV +++ A S GD SEN++Y K ++ R Sbjct: 5 KTYPMTQEGKQKLENELEQLKTVRRKEVVERIKIARSFGDLSENSEYDAAKDEQAFVEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L + N I+ + + V G V + +G + IVG E + IS Sbjct: 65 ITQLENMIRNAVIIKDTGEVSTVVTLGKTVTFKELPNGDEEAYTIVGSAEADPFEGRISN 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 DSP+A++LL K++G+ + TP GE + +++ Sbjct: 125 DSPIAKSLLGKQIGEKVTIQTPGGEMQVEIVSVK 158 >UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cellular organisms RepID=Q2Y7V5_NITMU Length = 213 Score = 168 bits (427), Expect = 5e-41, Method: Composition-based stats. Identities = 70/156 (44%), Positives = 96/156 (61%), Gaps = 2/156 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T EG+++L E +L ERP+VT V+WAA+ GDRSENADY Y KKRLREIDRR Sbjct: 30 SKNYITPEGHKRLMDEFLWLMNRERPQVTATVSWAAANGDRSENADYIYGKKRLREIDRR 89 Query: 62 VRYLTKCLENLKIVDYSPQQEG--KVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 +R+LT+ L+ +I+D S +E ++FFGA V N+ G IVG +EI + YIS Sbjct: 90 IRFLTRRLDMAEIIDPSMPREDESRIFFGATVTYINEKGEEKIVSIVGVNEIDTTRGYIS 149 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+AR LLK GD+ ++ P G + + Y Sbjct: 150 WVSPLARTLLKAREGDVVTLHAPGGTEELEILEVRY 185 >UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Gammaproteobacteria RepID=GREB_PSEAE Length = 168 Score = 168 bits (425), Expect = 6e-41, Method: Composition-based stats. Identities = 87/155 (56%), Positives = 111/155 (71%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 TPL+T EG +L+ EL+ LW RP+VT+ V+ AA+LGDRSENA+Y Y KK LREID RV Sbjct: 12 TPLITPEGAARLRAELHELWHVRRPQVTQAVSEAAALGDRSENAEYIYGKKMLREIDSRV 71 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 R+L K LENLK+V P +V+FGAWV +E++DG R+RIVG DE+ R + ISIDS Sbjct: 72 RFLRKRLENLKVVGERPADPNRVYFGAWVTLEDEDGEQARYRIVGPDELDLRNNQISIDS 131 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 P+ARAL+ KE+ +V TPAGE W+V IEY Sbjct: 132 PLARALVGKELDAEVLVRTPAGEKLWFVVEIEYPP 166 >UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Proteobacteria RepID=C5BN87_TERTT Length = 172 Score = 168 bits (425), Expect = 7e-41, Method: Composition-based stats. Identities = 109/155 (70%), Positives = 127/155 (81%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M TPL+T EG KLK EL+YLWR ERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR Sbjct: 17 MSTPLITEEGLTKLKSELDYLWRTERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 76 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 RVRYL K +++LK+V Y+ +QEG V+FG+WV+IEN+ G RIVGYDEIFG K+YISI Sbjct: 77 RVRYLRKRIDSLKVVRYAKEQEGSVYFGSWVKIENEAGENKELRIVGYDEIFGEKNYISI 136 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 DSPMA+ALL+K+VGD A+V T GE W + I Y Sbjct: 137 DSPMAKALLRKKVGDEAIVKTEVGEFCWEIMEISY 171 >UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylobacter upsaliensis RM3195 RepID=Q4HT85_CAMUP Length = 161 Score = 167 bits (424), Expect = 9e-41, Method: Composition-based stats. Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ ++ G+EKL EL L +RP V ++ A S GD ENA+Y +++ I+ Sbjct: 1 MEKEAMSSFGFEKLSAELKDLKDNQRPAVVVEIDVARSHGDLKENAEYHAAREKQALIES 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R+ L L +++D + + V FG+ V I + + ++ +VG E K YIS Sbjct: 61 RIAELGGILSRAQVIDPASYEHESVKFGSSVLIMDLESEKESKYTLVGTCESDLEKGYIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 I SP+ARA+L K+ GD V P GE+ + + ++ Y Sbjct: 121 IASPLARAMLGKKEGDEFKVRLPKGESEFEILSVTY 156 >UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Proteobacteria RepID=GREA_SPHWW Length = 158 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 1/155 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + + EG + L +EL L ERP + + A + GD SENA+Y K+R +I+ Sbjct: 5 EKLPMLAEGQKMLTEELARLK-AERPLIIDAIEEARAHGDLSENAEYHAAKERQGQIEAS 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + + L +++D S K+ FGA V + +DD R++IVG E + IS + Sbjct: 64 IADIEDRLSRAQVIDPSMLSGDKIVFGATVTLLDDDEKPVRYQIVGQTEADAKTGKISYN 123 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 SP+ RAL+ K+V D V P+G+ + V+ IE++ Sbjct: 124 SPLGRALIGKKVDDEVEVTVPSGDRFYLVSKIEFI 158 >UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bacilli RepID=GREA_OENOB Length = 162 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 2/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 KT +T EG KL+ EL+ L +RP +T ++ A S GD SEN++YQ K ++ R Sbjct: 5 KTYPMTAEGLAKLQAELDDLITNKRPAITSRIQEARSFGDLSENSEYQSAKDEQAFVEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 V+ L + ++ +++D S + V G + + DG + IVG E IS Sbjct: 65 VKQLQQMIQFAQVIDASSASKNVVTLGKKISFKEVPDGDEETYTIVGSAESDPLSGKISN 124 Query: 121 DSPMARALLKKEVGDLAVVNTP-AGEASWYVNAIE 154 DSPM +ALL + GD + P + + + Sbjct: 125 DSPMGKALLDHKTGDKVEIPLPENHSVTVEILHVS 159 >UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=GREA_SYNFM Length = 156 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 56/155 (36%), Positives = 88/155 (56%), Gaps = 1/155 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +T+EG+E+LK EL L R+ERP V + + A S GD SENA+Y+ K++ I+ Sbjct: 1 MPRVPITKEGFERLKIELQRLQRDERPMVIRAIEEARSHGDISENAEYEAAKEKQAMIEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R++ L + + +IV+ S G+ FG+ V +E+ + G +R+VG E + IS Sbjct: 61 RIQDLCQKMGECEIVEPSDNDNGRAIFGSTVVVEDTETGEVTSYRLVGPYEADVQSGTIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 + SP+ +AL+ KE G+ V TP G + V I Sbjct: 121 VVSPLGKALIGKEEGEEIRVQTPKGVRNIEVLEIR 155 >UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylobacteraceae RepID=D1B0C0_SULD5 Length = 167 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 1/156 (0%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 +T GY+KL EL+ L + +RPE ++ A S GD ENA+Y K++L ID R+ Sbjct: 4 KEPMTEYGYKKLTDELSDLKKRQRPETVIELDIARSHGDLKENAEYHAAKEKLAFIDSRI 63 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISID 121 L+ + +++D S + KV FG+ + +EN + + IVG E IS Sbjct: 64 AELSDLVSRSQVIDPSTYEHDKVRFGSTITLENLETNEEVTYSIVGSTESNPDLGLISYH 123 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 SP+++ L+ + V + ++ P G + + I Y + Sbjct: 124 SPLSKQLMGRCVDEEVMIKLPVGTQEYAILNITYCE 159 >UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myxococcales RepID=A7HDS3_ANADF Length = 169 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 71/159 (44%), Positives = 103/159 (64%), Gaps = 1/159 (0%) Query: 1 MKTP-LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREID 59 M P +T EG+ +L E +W +RP++ +V AA+LGDRSENA+Y Y KK+LRE+D Sbjct: 8 MTKPRYITPEGFRRLASEHERIWSVDRPKIVAEVEAAAALGDRSENAEYVYGKKKLRELD 67 Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 RR+R+L++ ++ L +VD P G+ FFGAWV IE+D+G FR+VG DE IS Sbjct: 68 RRLRFLSERMDALTVVDPRPHPHGRAFFGAWVTIEDDEGEARTFRLVGPDEFDVAAGLIS 127 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 +++P+ RALL K+ GD + PAGEA + A+ + P Sbjct: 128 VEAPLGRALLGKQEGDTVLFLRPAGEAELTIMAVRWSPP 166 >UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehalococcoides RepID=A5FRA2_DEHSB Length = 266 Score = 165 bits (419), Expect = 3e-40, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 2/156 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 ++ +T GY+KL+ EL L +R V +++ AA D ENA Y K++ +I+ Sbjct: 111 VEKIPMTASGYKKLEDELCILK-VKRIAVIEEMRLAALDKDMRENAPYHAAKEQRGQIEG 169 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R++ + L++ ++ +Y+ KV G V++ + +G + +V EI K IS Sbjct: 170 RIKEIEHELKHAEVSEYTDNNTSKVNMGNTVKLRDLKNGEQCIYTLVSPKEIEPLKGRIS 229 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ +AL + GD + P+G + + I + Sbjct: 230 ASSPIGKALFNRSKGDNIEIEVPSGTLQYVIEDISF 265 >UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R891_9PLAN Length = 164 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 1/153 (0%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +TREGY KLK EL+ + + P++T+K+ A + GD ENA+Y ++ + ++ Sbjct: 5 IPMTREGYAKLKAELDRMENVDMPDITQKIADARAEGDLKENAEYHAQREAQGLLQAKIN 64 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDS 122 + L I+D S +V FG V +++ D F +VG E I I S Sbjct: 65 LIRNKLSKASIIDPSTMPRDQVSFGTTVLVKDIDMDEEEEFTLVGAGEEDYNAGRILITS 124 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 P+ +AL+ K++GD+ V P G + +++ Sbjct: 125 PLGQALVGKKIGDVVDVPAPKGSYQLEILTLKF 157 >UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultured candidate division OP8 bacterium RepID=Q2Z001_9BACT Length = 156 Score = 165 bits (418), Expect = 4e-40, Method: Composition-based stats. Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ +T EG +KL+ EL L +RP K + A GD ENAD++ K I Sbjct: 1 MERYPITPEGLKKLEAELKRLREVDRPANVKAIEEARGHGDLRENADFKCAKDEQAMIVG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R+ YL + + ++D S +V FGA V ++N D G +R+VG DE + IS Sbjct: 61 RIAYLQGRISHAAVIDPSKLSGNRVVFGARVFLKNLDTGEPIVYRLVGEDEADIEQGSIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 I SP+AR L+++EVG+ A + P+G S+ + IE+ Sbjct: 121 ITSPLARGLIRREVGEQAKIAVPSGIKSFEIVKIEF 156 >UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergistaceae RepID=D1B632_THEAS Length = 164 Score = 164 bits (417), Expect = 5e-40, Method: Composition-based stats. Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + ++TREGYEKLKQEL L + R E+ K+ A + GD SENA+Y K+ +++ R Sbjct: 9 EQVIMTREGYEKLKQELASLRGDGRSEIASKLEEARAFGDLSENAEYHAAKEEQEKLESR 68 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + +L L K+V+ S V GA V++ + D G T+ + +VG +E + + IS Sbjct: 69 IMWLEYQLSKAKVVESSDIDTSTVSLGATVQLRDLDTGNTYTYVLVGSEEADPKANRISA 128 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+ +A++ + G+ +V P G + I Sbjct: 129 QSPVGKAIIGRAEGEEVIVRVPKGTRHLRIERIS 162 >UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus RepID=Q5SKM1_THET8 Length = 155 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 3/157 (1%) Query: 1 MKTP-LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREID 59 MK P +T EGY +L++ELN+L +R E++ A GD ENA Y ++ + + + Sbjct: 1 MKKPVYLTPEGYRRLQEELNHLKTVKRQEISADFEQALEEGDLRENAGYDEARRAMWQNE 60 Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 R+ L L IV+ +V G VE+E + G IVG E IS Sbjct: 61 ARIAQLEDLLSRAVIVENGSF--DQVALGCQVELETETGERLSLAIVGSHEADIFSGKIS 118 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 +SP+ +ALL K+VGD+ + G + + I+ + Sbjct: 119 DESPLGQALLGKKVGDVVEIRGKKGAQVYTILEIKPL 155 >UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Planctomycetaceae RepID=GREA_RHOBA Length = 159 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 +++ +TREGY K+K E+N + EE P + +K+ A GD ENA+Y ++ + Sbjct: 2 VESVPMTREGYNKIKAEINRMENEEMPMIVQKIAEAREEGDLKENAEYHAQRENQGMLMA 61 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYIS 119 ++ L + I+D S + +V FG V +E+ G +F +VG + I Sbjct: 62 KINELRDKIARASIIDVSSLPKDEVVFGCTVTVEDVAYGDEEQFTLVGAGDEDYDSGKIL 121 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + SP + L+ K+VG+ A V+ PAG+ + + IE+ Sbjct: 122 VTSPFGQGLVGKKVGETAEVDVPAGKLKFKILKIEF 157 >UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiothermus RepID=C1XQ58_9DEIN Length = 159 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 70/154 (45%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K +T EG ++L+ EL L +R E+ A GD ENA Y ++ + DRR Sbjct: 5 KPVYLTAEGLKRLQDELTTLKTVKRQEIAAAFEQAIEEGDLRENAGYDEARRAQWDNDRR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + L L +V+ +V G VE+E D G IVG E IS + Sbjct: 65 ISELESILARAVVVEAGNGTPLEVGLGVSVELETDTGARMSLTIVGSHEADVFNGKISNE 124 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SPM + L+ K+VGD +P G S+ + + Y Sbjct: 125 SPMGQRLMGKKVGDRVEYPSPKGVQSYTIVELSY 158 >UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gammaproteobacteria RepID=GREA_VESOH Length = 159 Score = 163 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 2/158 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M VT G + L+ L L RP + + + A + GD ENA+Y K+ ++ Sbjct: 1 MNNIPVTAFGAKALEAALLKLKDVSRPRIIEDIRIARAHGDLKENAEYHAAKEEQSFVEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEG-KVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYI 118 R++ + L ++I+D + + + FG + + N D ++IVG DE D I Sbjct: 61 RIKEIELKLSRMQIIDVTKLSQDGRCVFGTTITLMNSVDNSEITYQIVGEDEADISLDKI 120 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 S SP+A AL+ E GD +V P G+ + + ++EY Sbjct: 121 SCHSPIASALMGNEEGDKVIVKAPKGDIVYKILSVEYY 158 >UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chloroflexi (class) RepID=GREA_CHLAA Length = 157 Score = 163 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K +TREG +L+ EL YL ER ++ +++ A LGD SE+ +Y+ KK ++ R Sbjct: 4 KPTYLTREGRARLEAELEYLTTVERKQIAERIAAAKELGDISESGEYEDAKKAQALLEGR 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISI 120 +R L L +++D G+V G+ V + + DG + IVG E R+ IS Sbjct: 64 IRELKHLLSRAEVIDEDQASNGEVRVGSSVTVRFEDDGTEETWTIVGSAEANPRQGRISN 123 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ ALL K + V+TP+G + + Sbjct: 124 ESPLGAALLGKRARNKVTVHTPSGVMKLTILKVR 157 >UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Bacteria RepID=GREB_NEIMA Length = 163 Score = 163 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 72/156 (46%), Positives = 96/156 (61%), Gaps = 1/156 (0%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 +T G++ LK EL L +ERPE+ + V WAA GDRSEN DY Y K+R+REIDRR+ Sbjct: 6 KNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGDRSENGDYLYGKRRMREIDRRI 65 Query: 63 RYLTKCLENLKIVDYS-PQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 R+LTK LE +VD + +VFFGA V + DG +IVG DEI ++ IS Sbjct: 66 RFLTKRLEAAVVVDPELREATDQVFFGATVGLLRGDGREQTVKIVGIDEIDTAQNKISWI 125 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 SP+AR L+K GD V+NTP G + ++EY+K Sbjct: 126 SPLARCLIKAREGDEVVLNTPEGREEIEILSVEYIK 161 >UniRef50_UPI00016C498C transcription elongation factor greA n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C498C Length = 161 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 1/152 (0%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +TREGY+KLK EL+ L E E+TK+V A LGD SENA+Y ++ + R+ Sbjct: 6 IPMTREGYDKLKVELDRLRGAEMIEITKRVAAARDLGDLSENAEYHAAREDQGILQARID 65 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDS 122 L+ L IVD S + V FG+ V + + D F +V + K I S Sbjct: 66 ALSDRLSRAVIVDTSNLPKDTVAFGSKVRVLDVDVDEEETFELVSPGQENPDKGRILTGS 125 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 P+ + L+ ++ GD + P+G + + I Sbjct: 126 PIGQGLIGRKKGDTVEIQVPSGTIKFKILEIS 157 >UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neorickettsia RepID=GREA_NEOSM Length = 159 Score = 162 bits (410), Expect = 3e-39, Method: Composition-based stats. Identities = 53/156 (33%), Positives = 91/156 (58%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ +TREGY KL++EL L + +P V V A LGD SENA+Y +K ++ Sbjct: 1 MRKLPITREGYCKLQEELEKLVKVVKPSVVAAVAQARELGDLSENAEYHEARKEQSFVEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 ++R L CL +++D S +V FGA V +EN + ++IVG E ++ IS Sbjct: 61 KIRELQLCLSEAEVIDVSQFTGERVKFGASVTLENMESKSVLIYQIVGNLESDIKEGKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + SP+ +A++ KEVG++ ++ P+G+ ++ + +E+ Sbjct: 121 VSSPIGKAVMNKEVGEIVEIDLPSGKKTYKILGVEF 156 >UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ19_9FIRM Length = 156 Score = 161 bits (409), Expect = 4e-39, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 3/154 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T EGY KL ++LNYL +R E+ +++ A +LGD SEN++Y K ++ Sbjct: 4 KQVMLTEEGYNKLVEKLNYLKSVKRIEIAQRLKAAIALGDLSENSEYDDAKNEQAFLEGE 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISI 120 ++ LT + N I+ V G+ V +++ + G F +VG E + IS Sbjct: 64 IQDLTAKIRNSHIIKAGA--GDVVQMGSKVTVKDIEFGDEETFMLVGSTEADPDEGKISN 121 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ +ALL ++ G + V+ PAG + + I+ Sbjct: 122 ESPLGQALLGQKSGSVIDVHAPAGIIKYEILDIK 155 >UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostridiales RepID=Q67JL1_SYMTH Length = 157 Score = 161 bits (409), Expect = 5e-39, Method: Composition-based stats. Identities = 50/154 (32%), Positives = 85/154 (55%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K L++ +G ++L+QEL YL +R EV +++ A GD SEN++Y+ K I+ R Sbjct: 4 KEVLLSLDGLKQLEQELLYLRTVKRMEVAERIKQAREYGDISENSEYEDAKNEQAFIEGR 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L K L N +++D Q+ V G+ V + + + G H + IVG E + IS Sbjct: 64 ILVLEKMLRNARVIDEPVGQQEVVVLGSTVVLRDLEYGDEHTYTIVGTTEADPAHNRISN 123 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ RA++ + VG + V+ P G + + AI+ Sbjct: 124 ESPVGRAIMGQRVGTVVAVDAPDGVFKYEIVAIK 157 >UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteobacteria RepID=A2SJD8_METPP Length = 213 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 71/157 (45%), Positives = 91/157 (57%), Gaps = 1/157 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T G+ +L+ EL L +ERP+V + V+WAA GDRSEN DY Y KKRLREIDRR Sbjct: 54 SKNYITPAGFARLRAELMQLLDDERPKVVETVSWAAKNGDRSENGDYLYGKKRLREIDRR 113 Query: 62 VRYLTKCLENLKIVDYSPQQE-GKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 +R+LTK LE ++ D S + +VFFGA V DGV I G DE + +S Sbjct: 114 IRFLTKRLEIAEVADPSVHRGSDQVFFGATVTYAAPDGVERTITIKGIDEADNLQAEVSW 173 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 SP+ARALLK VGD + TP G + V + Y Sbjct: 174 ISPVARALLKARVGDEVTLLTPQGPQTIEVIEVRYPP 210 >UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cellular organisms RepID=Q0BR49_GRABC Length = 169 Score = 161 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 68/152 (44%), Positives = 91/152 (59%), Gaps = 1/152 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T G+ ++ EL L REERP++ + V+WAA GDRSEN DY Y KKRLREIDRRVR+ Sbjct: 14 YMTPVGHAQMVAELKQLMREERPKIVEIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRF 73 Query: 65 LTKCLENLKIVDYSPQQ-EGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 LTK LEN ++D + Q + +++FGA V N T + IVG DE IS+ SP Sbjct: 74 LTKRLENAVVIDPATQPHKDRIYFGATVTYINAADETVQVTIVGADEADMALGRISLLSP 133 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +A+ALL GD V TP + ++Y Sbjct: 134 VAKALLGASKGDEVTVITPVKTEILDILDVDY 165 >UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H062_UNCTG Length = 158 Score = 161 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 1/154 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +TREG +KL +ELN L + + P + ++ A GD ENA+Y K+ L + R Sbjct: 1 MSEIYLTREGRKKLIKELNELQKRK-PLIQDEIASAREHGDLRENAEYCAAKETLANLIR 59 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 R+ LT + KI++ KVF G V I+++ G +++ IV +E + ISI Sbjct: 60 RIMELTSKIACAKIIEEQNIDSDKVFIGVTVTIKDEYGADYQYAIVDLEEADPVANRISI 119 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+A+ LL G+ V PAG+ + + I Sbjct: 120 QSPLAQGLLGHTAGETVAVELPAGKTKFKILKIS 153 >UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria RepID=A3ESJ0_9BACT Length = 160 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +T+ GYEKLK+EL L EERP+ + + A + GD SENA+Y K+R I+ Sbjct: 1 MNQVPMTKAGYEKLKEELEKLKHEERPKNIQDIAEARAHGDLSENAEYHAAKERQGFINS 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYIS 119 R++ L + + +V + Q ++ FGA V + D R+ +VG +E + IS Sbjct: 61 RIKELEAKIASAIVVSSAHQDHSRITFGATVRLVPLDSKEEKRYTLVGQEEADLKAGRIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + SP+ +AL+ G+ + PAGE + + I Y Sbjct: 121 VHSPVGKALIGHSEGETVTIRVPAGEVQYTIAEIFY 156 >UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Bacteria RepID=GREA_CHLCH Length = 160 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 3/157 (1%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +T +GY +LK+EL L + R EV +K+ A + GD SENA+Y ++ +I+ R+ Sbjct: 5 IYLTNDGYNRLKEELYVLVHQTRKEVLEKIAEARAHGDLSENAEYDAAREEQSQIEARIG 64 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD--GVTHRFRIVGYDEIFGRKDYISID 121 L L I+D + KV+ V++ N D + +V +E IS+ Sbjct: 65 DLESKLSAATILDPKQIKTDKVYILTSVKLRNLDNPDEIIEYTLVSSEEADTDAGKISVR 124 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 SP+ R+L+ K VG + P GE + + I +VKP Sbjct: 125 SPVGRSLIGKTVGAKVTIVVPKGELHYEILEI-FVKP 160 >UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Rickettsiales RepID=B9KH08_ANAMF Length = 174 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 7/158 (4%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +TR G++KL+ EL L ERP++ K ++ A LGD SENA+Y ++R ++ ++ Sbjct: 18 PITRRGFQKLEAELEALKS-ERPKIIKSISDARELGDLSENAEYHAARERQGLVESKIME 76 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEI-----ENDDGVTHRFRIVGYDEIFGRKDYIS 119 L +++D S V FGA V + + D +++IVG E K+ IS Sbjct: 77 LESKRSRAEVIDVSELSGDTVMFGATVTVSVYDEQTDSTGVMQYQIVGEYEADVSKNMIS 136 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEAS-WYVNAIEYV 156 I SP+ +LL + GD V TP G+ + + IE+V Sbjct: 137 IKSPLVLSLLGRREGDSVEVKTPRGDYKIYQIMKIEFV 174 >UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Proteobacteria RepID=GREA_PSEPK Length = 160 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 86/156 (55%), Gaps = 2/156 (1%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 +T +G L++E +L + ERP +++ + A LGD ENA+Y ++ ++ R+ Sbjct: 5 KYPMTVQGARALEEEHLFLSKTERPRLSQAIGEARELGDLKENAEYHAAREEQGMVEARI 64 Query: 63 RYLTKCLENLKIVDYSPQQ-EGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 R + L+N ++D + GKV FG V + N + ++IVG DE ++ +S Sbjct: 65 RDIEGRLQNSVVIDVTTIPHTGKVIFGTTVVLANTETDEEVTYQIVGEDEADVKQGKLSS 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 +P+ARA++ KE GD VV TP+G + + ++++ Sbjct: 125 GAPIARAIIGKEEGDTVVVKTPSGTVEYEIVEVKHI 160 >UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AU03_RUBXD Length = 154 Score = 158 bits (399), Expect = 7e-38, Method: Composition-based stats. Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 2/151 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T EG+ KL++EL YL R EV +++ A GD SEN++Y K ++RR+ L Sbjct: 1 MTPEGFAKLQEELKYLTEVRRKEVAERIRQAREFGDISENSEYDDAKNEQGLLERRISEL 60 Query: 66 TKCLENLKIVDY-SPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 + L N KIVD S +EG V G V + DG F+IVG +E +S SP Sbjct: 61 QRRLRNAKIVDPASSAEEGAVDLGTRVTLRVVGDGRERTFQIVGANEADPASGKLSHASP 120 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 + +ALL++ VG+ V+TP G + + ++E Sbjct: 121 VGKALLRRRVGEKVRVSTPRGATEYEIVSVE 151 >UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Firmicutes RepID=GREA_LEUCK Length = 160 Score = 157 bits (398), Expect = 8e-38, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 78/155 (50%), Gaps = 2/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K +T EG +KL+ EL L +RPE+T ++ A S GD SEN++YQ K ++ R Sbjct: 5 KVFPMTAEGRDKLQAELEDLITRQRPEITNRIQIARSYGDLSENSEYQSAKDEQAFVEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L K +EN +I+D + V G V + D + IVG E IS Sbjct: 65 ILTLKKMIENAEIIDPNATAADVVSLGKTVTFKELPDEEPETYAIVGSTESDPLAGKISN 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 +S MA ALL K+VGD V P+GE + +E Sbjct: 125 ESAMAVALLDKKVGDKVSVPLPSGESIDVEILKVE 159 >UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicutes RepID=C4Z9L9_EUBR3 Length = 185 Score = 157 bits (398), Expect = 9e-38, Method: Composition-based stats. Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T G +KL+ EL L +R EV++K+ A GD SENA+Y K R+I+ R Sbjct: 27 KKNILTYAGLKKLEDELEQLKVVKRKEVSQKIKEAREQGDLSENAEYDAAKDEQRDIEAR 86 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + + K L+N ++V K+ G + I + + ++IVG E K IS Sbjct: 87 IEEIEKILKNAEVVVEEEVDLDKISIGCKIRILDCEFDEELEYKIVGSTEANSLKGKISN 146 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ +ALL K+VGD V T GE ++ V I+ Sbjct: 147 ESPVGKALLGKKVGDTVTVETQVGELTYKVLEIQ 180 >UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Dehalococcoides RepID=GREA_DEHE1 Length = 156 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 2/156 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 ++ +T GY+KL+ EL+ L +R +V +++ AA D ENA Y K++ +I+ Sbjct: 2 VEKIPMTASGYKKLEDELSTLK-VKRIDVIEEMRLAAMDKDMRENAPYHAAKEQRGQIEG 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R++ + L+ + +Y+ KV G+ V++ + +G + +V EI K IS Sbjct: 61 RIKEIEHELKYADVSEYTDTNTSKVNMGSTVKLRDPKNGECCTYTLVSPKEIEPLKGKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ +A+ + G+ + P+G + + I + Sbjct: 121 ASSPIGKAVFNRNKGEQIEIEVPSGTLQYIIEDISF 156 >UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYY1_9FIRM Length = 158 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 2/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T +T++G E+ ++E + L R EV ++ A + GD SEN++Y K E++ R Sbjct: 3 ETVFLTQKGLEEKQKEYDELVGVRRKEVADRIKEATAYGDLSENSEYDAAKNEQAELEER 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISI 120 + L L N +I+D + + V G V ++N +RIVG E + IS Sbjct: 63 ISVLEDMLNNYEIIDSNAAKGDVVDLGLNVHLKNITKKKEETYRIVGSAEADPFNNLISN 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 +SP+ + LLK +VG+ ++ P+G+ + + I Sbjct: 123 ESPIGKGLLKHKVGETVSIDIPSGKTVKYKILKIS 157 >UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Bacteria RepID=Q12SN9_SHEDO Length = 166 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 111/156 (71%), Positives = 125/156 (80%), Gaps = 1/156 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 +KT L+T EG KL ELNYLWRE RPE+TKKV WAASLGDRSENADY+ NK+ LR+ID Sbjct: 7 VKTNLITAEGLAKLTHELNYLWREYRPEITKKVAWAASLGDRSENADYKENKRLLRQIDG 66 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGR-KDYIS 119 RVR+L K +E LK+V Y+ +QEGKVFFGAWVEIEND+GV RFRIVG DEI+G K YIS Sbjct: 67 RVRFLRKRIEALKVVPYAAEQEGKVFFGAWVEIENDEGVKKRFRIVGPDEIYGDAKGYIS 126 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 IDSPMARALLKKEV D A V TP GE WY+N I Y Sbjct: 127 IDSPMARALLKKEVDDDASVLTPTGEQFWYINKIFY 162 >UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNS9_FIBSS Length = 169 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 58/154 (37%), Positives = 89/154 (57%), Gaps = 1/154 (0%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 L+++EG+EK K E +L ERP + +V AA+ GDRSENA Y Y + R+REIDRR+ Sbjct: 16 KHLISKEGFEKFKAEWEHLKYVERPAMINQVQAAAAEGDRSENAAYTYGRMRVREIDRRL 75 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISID 121 R L + L+ +IV+ + ++G + FGA V++ + + IVG EI + IS+ Sbjct: 76 RELDRILDGAQIVENAATKDGSIRFGATVKMIDKKTKREKIYSIVGDKEIDPLQGRISMK 135 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ AL K+ GD V P G+ + + + Y Sbjct: 136 SPIGEALQGKKAGDTVEVQAPRGKIVYEILEVNY 169 >UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Proteobacteria RepID=GREB_XANCP Length = 168 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 83/157 (52%), Positives = 107/157 (68%), Gaps = 1/157 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 T L+T EG+ +LK EL+ LWR RPEV + + AA+ GDRSENA+Y Y KK+L EIDRR Sbjct: 11 STALITPEGHARLKAELDELWRLRRPEVVRALAAAAAEGDRSENAEYTYRKKQLGEIDRR 70 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 VRYL+K LE L++VD +P VFFGA VE+E+ D G R+RIVG DE + +ISI Sbjct: 71 VRYLSKRLEALRVVDTAPTDPQAVFFGAQVELEDADSGELLRYRIVGPDETDAGRGWISI 130 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 DSP+ARALLKK V D P+G+ ++ V +EY Sbjct: 131 DSPLARALLKKRVDDEFEAQLPSGKHTFVVVVVEYAA 167 >UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3129D Length = 161 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 2/154 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T +G KLK EL +L E+R EV ++ A GD SENA+Y K ++ + Sbjct: 3 KDVILTPDGLAKLKSELEHLSTEKRREVAARIKEAREFGDISENAEYDDAKNEQAMLESK 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L + L ++D V G+ V++ + G + + IVG E + +S Sbjct: 63 IAQLEEKLRAATVIDSRSVGTDVVGIGSSVQVADSQSGKSDTYVIVGSAEANPAERKLSN 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAGE-ASWYVNAI 153 +SP+ +AL+ ++ G+ A V P G+ + I Sbjct: 123 ESPVGKALIGRKAGETATVQLPNGKQRELRITKI 156 >UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYP5_9BACT Length = 741 Score = 154 bits (390), Expect = 9e-37, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 1/153 (0%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 VT+ GYEK K+EL+ + + E + + A S GD ENA+YQ +++ ++ + Sbjct: 586 KIYVTKHGYEKQKKELDNIMNIQFAENARDLGEAISRGDLRENAEYQAAREKQAQLIEKA 645 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGV-THRFRIVGYDEIFGRKDYISID 121 L L+ + ++ + V G V I+N D T + ++G + K+ IS Sbjct: 646 ERLKADLQKIVFIEPYTVKTNIVSPGTKVTIKNKDKETTETYTLLGPWDADIDKNIISYL 705 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+ + LL K+ G+ + P E + IE Sbjct: 706 SPIGKGLLNKKTGETVTIQLPENEIVCDIIKIE 738 >UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUF3_CHRSD Length = 178 Score = 154 bits (389), Expect = 9e-37, Method: Composition-based stats. Identities = 70/154 (45%), Positives = 101/154 (65%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+ L+T GY +LK +L R +RP ++ KV AA+LGDRSENADY YNKK L + R Sbjct: 21 KSSLITARGYARLKGIHEHLSRVKRPALSTKVGEAAALGDRSENADYTYNKKELNRVIAR 80 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 +RYL K L+ L++VD P +V+FGA+V +E+DDG RIVG+DE K +IS+D Sbjct: 81 IRYLGKRLDELQVVDRLPADTSRVYFGAYVTLEDDDGEEMTIRIVGHDETDTDKRWISVD 140 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +P+A+A+L K + + VN P G+ ++ + I Y Sbjct: 141 APLAQAMLGKGLDEDVTVNAPGGDTTYIITDIAY 174 >UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6T4_SPHTD Length = 157 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 2/154 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T+EG + L+ EL+ L R E+ + + A GD ENA Y K I+ R Sbjct: 4 ERIPITKEGLKALQDELDDLVNRRRVEIAQALQAAREEGDLRENAGYDAAKHDQAFIEGR 63 Query: 62 VRYLTKCLENLKIVDYSPQ-QEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 +R + L +++D +P V G+ V IE DG + IVG E IS Sbjct: 64 IREIEDILRRAEVIDEAPNGDARVVRLGSTVTIE-IDGAQETYTIVGAVEAKPAAGRISN 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP RALL G+ + TPA + +E Sbjct: 123 ESPFGRALLGHREGEEVEIQTPAAVLHARIVNVE 156 >UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veillonellaceae RepID=D2RL35_ACIFE Length = 172 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 47/158 (29%), Positives = 84/158 (53%), Gaps = 3/158 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + ++T EG +KL+ EL+YL E+R +V +++ A S GD SEN++Y K ++ R Sbjct: 3 EQTILTEEGLKKLEDELDYLRSEKRQQVAERLKVAISYGDISENSEYDDAKNEQAFVEGR 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKD--YI 118 + L + N +I+ + + V G V+IE+ + + +VG E + I Sbjct: 63 ILTLENMIRNAQIIKDTDITKNVVSLGCKVKIEDMETHDQEEYTVVGTTEADPMAEPPRI 122 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 S +SP+ +A+L ++VG + V TP GE + + A+ Sbjct: 123 SNESPVGKAILGQKVGAVVKVTTPIGELDYKIVAVSRP 160 >UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Proteobacteria RepID=B5ZLJ0_GLUDA Length = 180 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 71/155 (45%), Positives = 89/155 (57%), Gaps = 1/155 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 VT G ++ ELN L R+ERP + V+WAA GDRSEN DY Y KKRLREIDRRVR+ Sbjct: 22 YVTPAGMAAMRGELNALLRDERPRIVDIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRF 81 Query: 65 LTKCLENLKIVDYS-PQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 LT+ +E +VD + + +VFFGA V +D IVG DE +S+ SP Sbjct: 82 LTRRIEKAIVVDPAAQTRRDRVFFGATVTYVTEDDTERTVVIVGVDESDLAAGQVSLASP 141 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 +ARALL VGD + TPAG + I Y P Sbjct: 142 VARALLGGRVGDEVRLLTPAGAEMIEILRIAYPAP 176 >UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrobacter RepID=Q2N9J5_ERYLH Length = 159 Score = 153 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 64/159 (40%), Positives = 91/159 (57%), Gaps = 3/159 (1%) Query: 1 MKTP--LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREI 58 M P +T GY LK + L ERPE+ + V+WAA GDRSEN DY Y +KR+REI Sbjct: 1 MSQPSHPITPGGYAALKARYDRLLGTERPEIVEIVSWAAGNGDRSENGDYIYGRKRMREI 60 Query: 59 DRRVRYLTKCLENLKIVDYSPQQE-GKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDY 117 DR + +L + +++ ++++ S Q + + FFGA + + ++D +VG DE Sbjct: 61 DRELAHLARRMKHARVIEPSEQPDKDRAFFGATLTLADEDDARKTVTLVGDDEQDASAGK 120 Query: 118 ISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 I SP+ARAL VGDL V+ P+GE W V AI Y Sbjct: 121 IGWSSPLARALRGARVGDLRTVHLPSGEREWEVMAIAYA 159 >UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=GREA_THERP Length = 156 Score = 153 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 2/154 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +TREG E L+QE YL + RPE+ + + A GD ENA Y K I+ R Sbjct: 4 ERIPITREGLEALRQEYEYLVKHRRPEIARVIQEAREHGDIRENAAYDAAKHDQAFIEGR 63 Query: 62 VRYLTKCLENLKIVD-YSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 +R + + L+ +++++ + V G+ V IE DG + IVG E IS Sbjct: 64 IREIEELLKRVELIEQPTDGDRSVVRVGSTVTIE-IDGEIETYTIVGAIEAKPSAGRISN 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ RALL G++ + TP G + ++ Sbjct: 123 ESPVGRALLGHRAGEIVPIETPNGTLMARIIEVQ 156 >UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q096W9_STIAU Length = 144 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 70/143 (48%), Positives = 96/143 (67%), Gaps = 1/143 (0%) Query: 14 LKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLK 73 + +EL L ERP+VT +V+ AA+ GDRSENA+Y Y KKRLREIDRR+R+L K L+ Sbjct: 1 MHRELLRLLNVERPKVTAEVSAAAAQGDRSENAEYIYGKKRLREIDRRIRFLQKRLDTAT 60 Query: 74 IVDYSP-QQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKE 132 IV + +G+V+FGA V +E++DGV ++IVG DEI + IS++SP+ +ALL+K Sbjct: 61 IVTPAEQTDQGRVYFGATVTLEDEDGVQTTYQIVGSDEIDTQGGRISVESPIGKALLRKA 120 Query: 133 VGDLAVVNTPAGEASWYVNAIEY 155 VGD V P GE + AI Y Sbjct: 121 VGDSVEVMRPRGEIELTIVAIAY 143 >UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotella copri DSM 18205 RepID=D1PEW3_9BACT Length = 154 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 1/151 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +++EGY++L EL ++ E P V + A GD SEN +Y K+ ++ R+ + Sbjct: 3 YMSQEGYDELVAELQHMVNVELPAVRDAIAEARDKGDLSENFEYHAAKREQGKLLSRISF 62 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGV-THRFRIVGYDEIFGRKDYISIDSP 123 K LEN +++D S + V + ++I N + + IV E ISI SP Sbjct: 63 KQKVLENARVIDKSRLKSDTVGLLSKIKITNLANKCSMNYTIVNPHEADLHSGKISIKSP 122 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +A+ALL K+ G+ +V PAG + ++++E Sbjct: 123 IAKALLGKKAGEEVMVKVPAGLLKFRLDSVE 153 >UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobacteriaceae RepID=C8W826_ATOPD Length = 159 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T EG +KL EL Y E+ E+ +++ A GD SEN++Y K+ + R Sbjct: 5 KEIVLTPEGRQKLVDELAYREGEKHDEIVERIKEARGFGDLSENSEYDAAKEEQSHNESR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + + + L K+V+ +++ V G VE+ + G T ++ IVG E + IS + Sbjct: 65 INEIRQILSVAKVVEGGSKRKVTVAIGTTVELADAKGKTTKYVIVGTTETNSLEHKISNE 124 Query: 122 SPMARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 SP AL+ + GD TP G+ + + +I Sbjct: 125 SPAGEALIGHKKGDEVEFTTPNGKVKKYTIISIT 158 >UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=Desulfovibrionales RepID=GREA_DESMR Length = 164 Score = 151 bits (381), Expect = 8e-36, Method: Composition-based stats. Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 2/159 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M++ ++ EG+ + + ++ERP V + A GD ENA Y+ ++R ++ Sbjct: 1 MESIPISVEGFRR-LERELERLKKERPGVILAIKEAREEGDLRENAGYEAARERQGMLEA 59 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R+ Y+ + ++D + +V FGA VEIE+ D G ++ ++G DE K IS Sbjct: 60 RINYIESRMSRFNVIDLATLGGEQVIFGATVEIEDVDTGDVKKYTLLGPDEAEPSKGSIS 119 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 + SP+ ALL K VGD VV+ P G+ ++ + +I + P Sbjct: 120 LLSPVGLALLGKFVGDEIVVDAPRGKINYEIVSIAFHGP 158 >UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Bacteroidetes RepID=GREA_FLAPJ Length = 158 Score = 151 bits (381), Expect = 9e-36, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 2/156 (1%) Query: 1 MKTP-LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREID 59 M T T EG +KLK EL L ERP+ + + A GD SENA+Y K+ ++ Sbjct: 1 MSTVSYYTAEGLKKLKDELEQLKAIERPKASADIAEARDKGDLSENAEYDAAKEAQGLLE 60 Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYI 118 +++ + + N +++D S K + V+I+N +G+ + +V E + I Sbjct: 61 LKIKKMEEVYSNARLIDESQLDVSKALVLSHVKIKNQSNGMEMSYHLVAESEADLKTGKI 120 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 S+ SP+ + LL K VG++A + P G + V I Sbjct: 121 SVTSPIGKGLLGKSVGEIAEITVPNGILKFEVLEIT 156 >UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostridiales RepID=A8SDG2_9FIRM Length = 161 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 2/158 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + ++ G + +++EL YL R E+ +++ A S GD SEN++Y K ++ R Sbjct: 3 QEIKMSAAGLKAMQEELEYLKTVRRKELAEEIKEARSHGDLSENSEYDEAKNTQGLVENR 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISI 120 + L + ++N I+D S V G V I E + + IVG E IS Sbjct: 63 ITELEQTIKNAVIIDESELSVDNVSVGTHVTIRETGEDEAEEYDIVGRTEADAFNGKISD 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIEYVK 157 +SP+ AL+ K VGD A V P G + V AI + Sbjct: 123 ESPVGHALMGKAVGDKAEVLLPTGQTVVYTVLAITHSA 160 >UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37CEA Length = 156 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 53/155 (34%), Positives = 80/155 (51%), Gaps = 1/155 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M ++RE Y+KL ELN L +R EV +++ A S GD SENA+Y K ++ Sbjct: 1 MAVKQMSRESYDKLVAELNDLIINKRKEVAERLKVARSYGDLSENAEYDEAKNEQAILEA 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYIS 119 + L ++N +IVD S ++ + + I D G F IV + R+ IS Sbjct: 61 HIAELQYTIDNAEIVDDSNISVDEIGMSSKITIKRLDTGKIETFTIVSTNHANVREGKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+ +A +KK VGD+ +V+ PAGE + V I Sbjct: 121 DASPIGKAAMKKRVGDVFIVDAPAGELKFEVVEIS 155 >UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=Thermomicrobia (class) RepID=B9KZF4_THERP Length = 156 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 1/151 (0%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 ++T EG L+QEL +L + + P + +++ ++ GD S+N++Y+ K+ L + R+R Sbjct: 7 IVLTPEGKAALEQELEHLRQHKLPLLLERLQQLSNEGDISDNSEYEDTKEELVLTEARIR 66 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 + L +++ + +V G+ V + +++G + IV +E + ISI+SP Sbjct: 67 EIEHILRRAQMI-TRAGPQDEVRLGSRVTVIDEEGSVETWVIVSPEEANAAQGRISIESP 125 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 + ALL K VG V P GE + + IE Sbjct: 126 VGAALLGKRVGTTVTVRAPGGEMRFTIQRIE 156 >UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Proteobacteria RepID=GREA_BUCCC Length = 159 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 2/156 (1%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 +T G+ KLK EL L RP + K + A LGD ENA+Y ++ + R+ Sbjct: 4 KIPMTLRGFNKLKSELKKLKYITRPCIVKAIANARQLGDLKENAEYHSAREEQSFCENRI 63 Query: 63 RYLTKCLENLKIVDYSPQQ-EGKVFFGAWVE-IENDDGVTHRFRIVGYDEIFGRKDYISI 120 + L +I+D + +G V FG+ V ++ + IVG DE ++ ISI Sbjct: 64 CEIENKLLRAQIIDITKIPFKGIVIFGSTVTVLQISTSNIFVYTIVGDDEANYKEFSISI 123 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 SPM+RAL+ K+ D+ VNTP G + + IEY+ Sbjct: 124 HSPMSRALIGKKKNDIIKVNTPTGYIKYIIKKIEYI 159 >UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clostridia RepID=GREA_SYNWW Length = 159 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T+EG EKL+ EL +L +R EV +++ A + GD +EN++Y+ K I+ R Sbjct: 5 KEVVLTKEGLEKLENELEHLKSVKREEVAERIKQAIAFGDITENSEYEDAKNEQAFIEGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L K L+ ++++ + V G+ + ++ G +V E + IS Sbjct: 65 IISLEKTLKKARLMEDEDIRTDVVSLGSRITLKEMKSGREVTVTLVSSVESKLKDGKISD 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ +A++ K+V V PAG + + +E Sbjct: 125 ESPVGKAIMGKKVKSTVSVEAPAGTIKYKIIKVE 158 >UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8A6_9FIRM Length = 151 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 1/149 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+EGY+ LK+ELN L R E+++K+ A GD SEN++Y K ++ R++ L Sbjct: 1 MTQEGYDALKKELNELKSVTRGEISEKIRVARGFGDLSENSEYDEAKNEQAVVEARIKKL 60 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSPM 124 L+++KI++ V G+ V+I + D + I E + IS +SP+ Sbjct: 61 EDQLKHVKIIERDQISTDVVSVGSRVKILDMDYDEEMVYTIASSVESHNDLESISDESPV 120 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAI 153 + L+ +VGD+ ++ PA + I Sbjct: 121 GKGLIGHKVGDVVEIHAPAAVLKLKILEI 149 >UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylobacterales RepID=Q30T56_SULDN Length = 174 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 84/156 (53%), Gaps = 2/156 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ ++ EGY+ L +E +L E+P+ ++ AA+LGDRSENADYQ K++LR ID+ Sbjct: 1 MQE-PMSIEGYDVLIEEFKFLLEVEKPKTAQEKLVAAALGDRSENADYQAAKEKLRHIDK 59 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R+ YL ++ I+D S KV FG+ V I + + + I G E IS Sbjct: 60 RLFYLNAMIQKAHIIDPSTLLHTKVSFGSSVRILDLESDKEEVYTICGVLESEPENGLIS 119 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 I SP+A+ +L K V D + P + + + I Y Sbjct: 120 IHSPLAQVMLGKRVSDEFKIQLPLMKKEYEILEIYY 155 >UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKD0_FIBSS Length = 151 Score = 148 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 3/148 (2%) Query: 7 TREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR-RVRYL 65 T+E Y+KL ++L L ERP V +++ A + GD SENA+Y K+RL ID + L Sbjct: 3 TQEAYDKLVKDLENLKNVERPRVLQELVDARAQGDLSENAEYHAAKERLASIDNIEMPKL 62 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 L +++ + + FGA + +N +++V +E IS SP+ Sbjct: 63 QDQLARAQVIAFDANS-DTIKFGATITAKNLKTKREIVYQLVSPEEADALNGKISFKSPI 121 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNA 152 AL+ K+ GD V TP G+ + + Sbjct: 122 GAALMGKKRGDTVEVVTPKGKNQFEIID 149 >UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WJ76_9ACTN Length = 161 Score = 148 bits (373), Expect = 8e-35, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 3/154 (1%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 ++T EG +KL++EL++L E+R EV +++ A GD SEN++Y K ++ R+ Sbjct: 10 EIVLTPEGKQKLEEELHFLETEKRAEVGERIRVAREFGDISENSEYDDAKNEQGLMEARI 69 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 + L N +V+ +P++ +V G+ V + + G F IVG E IS +S Sbjct: 70 AQINDILSNAVLVE-APKRSNRVNIGSTVTV-DMGGRERVFTIVGAAEADVSSGKISNES 127 Query: 123 PMARALLKKEVGDLAVVNTPAGE-ASWYVNAIEY 155 P+ ALL + GD P G + IE+ Sbjct: 128 PVGAALLGGKKGDHFTAEGPTGRVIEMDIVKIEH 161 >UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZBG3_PLALI Length = 160 Score = 147 bits (372), Expect = 9e-35, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 3/157 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ ++REGY+KLK+E+ L ++ P++ + + A + GD ENA+Y ++ + Sbjct: 1 MELQPISREGYDKLKEEIRKLEHDDMPKIAEAIAEARAEGDLKENAEYHGQREEQGRLQA 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKD--Y 117 R+ L L + IVD S +G V FG V ++N DDG ++ VG E D Sbjct: 61 RINSLKSKLASCYIVDKSTLPKGVVAFGTRVTVKNTDDGDIEKYEFVGPGEEDYMSDVMK 120 Query: 118 ISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 I SP+A ALL K+V D + P G ++ + IE Sbjct: 121 ILTTSPLASALLGKKVNDKVSIQVPRGTINYEITEIE 157 >UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococcus RepID=Q1J0L4_DEIGD Length = 156 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 2/152 (1%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +T+ GY+KL++ L YL R ++++ + A + GD E+A Y + + E + R+ Sbjct: 6 IPMTKRGYDKLRETLEYLKTTRREQISEYMGSAIADGDLRESAAYDEARMQQSENEARIL 65 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L LE +I++ G GA V++ ++ G +F +VG E+ K IS SP Sbjct: 66 ELEDQLERAQIIEEDA--SGGAGLGAKVKVRDEKGNERQFELVGTYEVDVLKGKISDASP 123 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + +AL K G + V P G A + V + Y Sbjct: 124 IGQALSGKRPGQIVTVQLPKGSAKFEVLEVTY 155 >UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellular organisms RepID=Q2G8D8_NOVAD Length = 182 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 1/155 (0%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +T G+ L+ ++L ERP + + V+WAA GDRSEN DY Y +KR+REIDR + Sbjct: 27 HPITPAGFAALRARYDHLLGTERPAIVEIVSWAAGNGDRSENGDYLYGRKRMREIDRELA 86 Query: 64 YLTKCLENLKIVDYSPQ-QEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 +L + ++ ++VD + Q +V FGA VEI ++D +VG DE K I + Sbjct: 87 FLARRMKASRVVDPARQEDRSRVLFGATVEIADEDDNRKVLTLVGDDEQDASKGLIGWSA 146 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 P+A+AL VGDL +V P+G+ W + AI Y + Sbjct: 147 PIAKALRGSRVGDLRIVRLPSGQKEWEIMAISYPE 181 >UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZQ0_HALNC Length = 175 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 69/161 (42%), Positives = 95/161 (59%), Gaps = 5/161 (3%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M T +++ G+ +L EL+ LWR ER V + V+ AA+LGDRSENA+Y Y K+RLREIDR Sbjct: 1 MSTAVISARGHARLLAELDQLWRVERRLVVQAVSEAAALGDRSENAEYIYGKRRLREIDR 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 R+RYL K L ++K+V P KV+FGA + + D +VG DEI ISI Sbjct: 61 RIRYLQKRLGDIKVVRQPPTDMNKVYFGARITLLYADDREQTVCLVGPDEIDPANQLISI 120 Query: 121 DSPMARALLKKEVGDLAVVNTPA-----GEASWYVNAIEYV 156 DSP+A+A+L K + V+ P+ + AIEY Sbjct: 121 DSPLAKAVLGKALDAEVVLFLPSETSTPRRVHAEIIAIEYP 161 >UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03RN4_LACBA Length = 132 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 65/130 (50%) Query: 24 EERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEG 83 +RP+V ++ A S GD SEN++Y+ K ++ R+ + + L+ +I+D + Sbjct: 2 VQRPKVIDRIKIARSYGDLSENSEYESAKDEQSMLETRISTVERMLQYAQIIDNDDTDKD 61 Query: 84 KVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPA 143 ++ G V + DD + IVG E IS DSP+A+ LL VG+ TP Sbjct: 62 EITVGKKVTFQEDDDEPEEYTIVGAAEADPMSGKISNDSPIAKGLLGHRVGETVTFPTPG 121 Query: 144 GEASWYVNAI 153 G+ + V A+ Sbjct: 122 GDMTVKVIAV 131 >UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017427C8 Length = 151 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 5/155 (3%) Query: 1 MKTPL-VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREID 59 M +T G +LK EL L R E+ +K+ A GD SENA+Y ++ ++ Sbjct: 1 MNKVYQITEAGKNELKDELETLKG-RRGEIAEKIAEARDYGDLSENAEYDAAREEQGIVE 59 Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 R+ + L+N I+ G+V G+ VE+ T + +VG E + +S Sbjct: 60 TRIAEIENILQNAAIITGGV--SGQVGLGSVVELMTGS-KTAVYTVVGPVEADPLEGKVS 116 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ AL+ K+V D+ +NTP G+ + + +I+ Sbjct: 117 NESPIGAALMGKKVDDIVEINTPKGKLEYKIISIK 151 >UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Proteobacteria RepID=Q1H282_METFK Length = 165 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 52/152 (34%), Positives = 81/152 (53%), Gaps = 14/152 (9%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 VT G++ L+Q+ + L +E +P +K D ++RL IDR +R Sbjct: 28 NYVTPHGFKLLQQQASALEQERQPLTMRK--------------DDPAVQQRLAMIDRDLR 73 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 YL LE+ +VD + Q V FGA VE+E+++G +H F IVG DE + +S SP Sbjct: 74 YLQARLESAIVVDPATQPTDTVLFGATVEVEDENGNSHTFMIVGEDEADIATNRVSWVSP 133 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +A+AL+ +++GD + PAG + AI Y Sbjct: 134 LAKALIGQKIGDSVTWHRPAGNLELEIIAIHY 165 >UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachyspira RepID=C0QWD9_BRAHW Length = 154 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 3/155 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +T+EGY+K K +L L E + + A GD ENA+Y K++ ++ Sbjct: 1 MAK-PITKEGYDKAKSKLADLK-AEFETLPAIIAEAREKGDLKENAEYHAAKEKQGLLNA 58 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYIS 119 ++ L L +I+D + + V FG V++++ +RIVG E K+ I+ Sbjct: 59 QISKLESDLAGCEIIDPANLDKDTVTFGKRVKVKDKSRNAVFEYRIVGELEADMSKNEIT 118 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 I +P+A+ LL K++GD+ + PAG+ + I Sbjct: 119 IVTPIAKGLLGKKIGDVVTIKVPAGDKVLEILEIS 153 >UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ08_9BACE Length = 157 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++ E +++LK EL YL EV ++ A S GD SEN++Y K ++ R Sbjct: 3 KEFKLSPERWKELKDELVYLKTVREKEVADQIKEARSFGDLSENSEYDEAKNEQGKLYSR 62 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + + LEN +++ V G+ +++ + + + +VG E IS Sbjct: 63 IAEVENILENCVVIEEEIHDGKTVRLGSKLKVLDVEFNEELDYEVVGSQEADPMNGRISE 122 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 DSP RALL K VG+ VV PAG + V +I Sbjct: 123 DSPFGRALLGKSVGEDVVVEAPAGALHYKVLSIS 156 >UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acidobacteria RepID=Q01RT9_SOLUE Length = 164 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 1/144 (0%) Query: 12 EKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLEN 71 +KL+ E+ L E ++ K++ A GD ENA+Y K R + R+ L L Sbjct: 6 KKLQDEITALEYELHVDLPKEILKARLHGDLKENAEYHAAKDRQGFVSARLGQLKSRLGQ 65 Query: 72 LKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLK 130 L ++D++ K G+ V + + + +V +E +S SP+ RALL Sbjct: 66 LAMIDFTKIPRDKAGLGSTVVVLDVKSDQEITYHLVTSEEADAPNGKVSTTSPIGRALLG 125 Query: 131 KEVGDLAVVNTPAGEASWYVNAIE 154 K VGD V +P G + + Sbjct: 126 KTVGDEVKVMSPGGVKELEILKLT 149 >UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N7T1_SLAHD Length = 155 Score = 145 bits (366), Expect = 6e-34, Method: Composition-based stats. Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 3/153 (1%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 ++T EG EKL+ EL YL E+R EV +++ A GD SEN++Y K ++ R+ Sbjct: 5 YVLTPEGKEKLEAELLYLENEKRAEVGERIKIAREFGDISENSEYDDAKNEQGMLEVRIA 64 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 + L N +V+ +P++ +V G+ V + + G F IVG E + IS DSP Sbjct: 65 QINDILANATVVE-APKRSNRVTVGSTVTV-DMGGRERVFTIVGGAEANAAEGKISNDSP 122 Query: 124 MARALLKKEVGDLAVVNTPAG-EASWYVNAIEY 155 + LL + GD P G + V IE+ Sbjct: 123 VGSVLLGSKKGDQLTTEGPTGRKIEITVLNIEH 155 >UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Polynucleobacter necessarius RepID=B1XUH7_POLNS Length = 168 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 70/164 (42%), Positives = 92/164 (56%), Gaps = 9/164 (5%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T GYE++K EL L +R EV K V WAAS GDRSEN DY Y KKRLREIDRR Sbjct: 3 EKNYITLAGYERIKTELLQLLNLDRLEVVKVVHWAASNGDRSENGDYIYGKKRLREIDRR 62 Query: 62 VRYLTKCLENLKIVDYS-----PQQEGKVFFGAWVEIEN----DDGVTHRFRIVGYDEIF 112 +R+L K LE +VD S +VFFGA V + G IVG DE+ Sbjct: 63 IRFLNKRLEFAIVVDNSARKSGENDADQVFFGASVTYSALEGPEAGKRTSITIVGVDEVD 122 Query: 113 GRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 K ++S SP+A+AL+K +GD + TP G + ++Y+ Sbjct: 123 LDKSHVSWVSPIAKALIKSRIGDCVFIQTPTGPTEIEILDVQYL 166 >UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Mycoplasma RepID=GREA_MYCPU Length = 157 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 4/152 (2%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 +T+E +K ++E +L ERP V ++ A GD SENA+Y +++ +I+ R+ Sbjct: 6 KIYLTQETIKKYEEEKWHLINVERPAVILEIKEARQQGDLSENAEYDAAREKQGQIEDRI 65 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISID 121 L L N + S K+ G+ V I N G F+IVG + ++ IS + Sbjct: 66 TELENILSNAISIQESH--SDKIGLGSVVRILNQSTGKERTFKIVGSFDTDPTQNKISYE 123 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 SP+A++++ GD+ ++ P + + + ++ Sbjct: 124 SPLAKSIIGFSKGDVVEIDAPD-KYTTKILSV 154 >UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria RepID=B0N6V6_9FIRM Length = 161 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 4/157 (2%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + L+T+ G EKL+QE + L ERP+V +++ A S GD SENADY +++ ++ R Sbjct: 4 EKVLLTQSGVEKLEQERDNLINVERPKVIEELQLARSQGDLSENADYDAAREKQAHLESR 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN---DDGVTHRFRIVGYDEIFGRKDYI 118 ++ + L+N +++ V G V I + D ++IVGY E I Sbjct: 64 IKEIDYMLQNAEVISEEQMDLKVVKPGTTVTILDLSEKDAEPESYQIVGYTETDPLNGKI 123 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 S +SP+A+A+L V ++ V + IE+ Sbjct: 124 SNESPLAKAVLGHGVNEIVTVGVAD-PYDVKIVNIEF 159 >UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LES5_SYNFM Length = 155 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 1/153 (0%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 +TR GY +L +EL +L RPEV +++ A + G + EN Y ++R + +++ Sbjct: 2 KVPITRLGYHRLLRELFFLRHVVRPEVIEELQEARTGGIKIENQQYMLARERHMVLQKKI 61 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISID 121 + L + L + +IV + FG V I+N + G T R+++VG E +SID Sbjct: 62 QDLERKLASCEIVVGRKFFFKQAEFGTIVVIQNIETGETQRYQLVGPYESNVVDGKLSID 121 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+ R L+ + G+ +V TPAG + V +I Sbjct: 122 SPVGRHLVGRREGEEVLVYTPAGVRMYRVVSIT 154 >UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Actinomycetales RepID=D2PP26_9ACTO Length = 169 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 7/160 (4%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T++GY++LK EL +L R E+T++++ A GD EN Y K +I+ R Sbjct: 8 SVVWLTQDGYDQLKSELEHLKGPARAEITQRISEARDEGDLKENGGYHAAKDEQGKIEAR 67 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDE-----IFGRKD 116 +R L L ++ + +P+ +G V G V I ++G E D Sbjct: 68 IRQLEDMLRRARVGE-TPKDDGVVEPGMKVSITFAGDDDVETFLLGSRELLALDTSVDID 126 Query: 117 YISIDSPMARALLKKEVGDLAVVNTPAGE-ASWYVNAIEY 155 S SP+ A++ K+ GD A P G+ + + A E Sbjct: 127 VYSPQSPLGAAIMGKKKGDKATYEAPNGKDVTVEIVAAEP 166 >UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Borrelia RepID=GREA_BORBU Length = 901 Score = 143 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 2/159 (1%) Query: 1 MKTPLVT-REGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREID 59 M+ +T K ++EL YL E PE +K++ A LGD ENA+Y K++ + + Sbjct: 741 MEIGFLTILSSLNKKQKELKYLKEVEIPENSKEIGKARELGDLKENAEYHSAKEKQQFLT 800 Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYI 118 +R+ L +EN K++D Q V FG V I N+ G + I+G E + I Sbjct: 801 KRLNSLMLEIENAKVIDTKDLQSSVVGFGTKVVILNEVTGKDESYLILGPWESNPDEGII 860 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 S SP LL GD ++V IE +K Sbjct: 861 SYKSPFGENLLDSREGDSLNFVINNTNFKYFVKKIEPIK 899 >UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteria RepID=D0J9T5_BLASP Length = 162 Score = 143 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 2/158 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K +T+EG +KL+QE+ L ERP+++ ++ A GD SENA+Y K+ ++ Sbjct: 5 KFEYITKEGLKKLQQEIERLENIERPKISMQIAEARDKGDLSENAEYDAIKEAQEFLEMN 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISI 120 + L K L N +I+D S +V + V ++N G + +V E + ISI Sbjct: 65 IAKLKKKLSNARIIDGSQINRTRVSILSTVRVKNLTYGGEQIYTLVPEGEADLKSGKISI 124 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEA-SWYVNAIEYVK 157 ++P++ LL K+VG +A + P + + I + + Sbjct: 125 NTPISTGLLGKQVGQIAHIKLPNKMILDYEILEIAFSE 162 >UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9C2_9ACTN Length = 156 Score = 143 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 3/154 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 ++T EG +KL +EL + + E+ + + A + GD SEN++Y K + + R Sbjct: 4 SQIVLTAEGRQKLVEELAWREGDYAKEIVEDIKEARAFGDLSENSEYDAAKDKQAQNAAR 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + + L N ++ + + V G+ V + + +G +VG E + IS + Sbjct: 64 IAEIQAILANAQV--AATTGDLTVSIGSTVSLIDPNGEVMEVTLVGTTETNSLEHKISNE 121 Query: 122 SPMARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 SP+ A++ GD V TP+G+ + + I Sbjct: 122 SPVGHAIIGHGEGDSVEVVTPSGKTRVYTIAKIA 155 >UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mollicutes RepID=GREA_MYCCT Length = 157 Score = 141 bits (357), Expect = 5e-33, Method: Composition-based stats. Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K ++T+EG E+LK EL L RP+V +++ A + GD SENADY + R E++ R Sbjct: 3 KEIILTQEGLEELKAELKNLLEVTRPKVIEELVEARNQGDLSENADYDAARNRQAEVEAR 62 Query: 62 VRYLTKCLENLKIVDYSPQ-QEGKVFFGAWVE-IENDDGVTHRFRIVGYDEIFGRKDYIS 119 ++ + + K++D S G+V G+ VE + + D T +IVG E IS Sbjct: 63 IKEVETLINRAKVIDNSKTHSTGEVKIGSTVEFLSSLDHKTKEIKIVGAIEADPFSRLIS 122 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+A+A+L K++GD + + +I+ Sbjct: 123 NESPIAKAILGKKIGDTVEIKDILKPYKITIKSIK 157 >UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Mycoplasma RepID=GREA_MYCGE Length = 161 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 3/155 (1%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 +T+EG+++L++EL L + +RPE+ + + A GD SENADY K + EI+ R+ Sbjct: 5 KNYLTQEGFKQLEKELENLIQVKRPEIIRLLQEARDQGDLSENADYDAAKAQQGEIETRI 64 Query: 63 RYLTKCLENLKIVDYSPQQEGK--VFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 + L N K++ + V G+ VEI + ++ IVG E + IS Sbjct: 65 AEIQDILANAKLISDHQAKTKVTKVSLGSTVEIYDYSSKSNEKYTIVGTLEANPEEHKIS 124 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+A A+ + +GD V + I Sbjct: 125 NESPLALAIYGRLIGDECDVVGIEVPYRVKILKIS 159 >UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobacillus rhamnosus RepID=C7T958_LACRG Length = 165 Score = 141 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 53/154 (34%), Positives = 76/154 (49%), Gaps = 4/154 (2%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T G LKQE+ L RP K + AA+LGDRSENA+Y K+ LR+++ R+RYL Sbjct: 7 ITPAGLANLKQEVADLKAI-RPAKIKNLAEAAALGDRSENAEYSAAKRELRQLEGRLRYL 65 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDG-VTHRFRIVGYDEIFGRKDYISIDSPM 124 K + K+ + G WV +E DD + +VG E ++I+SP+ Sbjct: 66 DKLIRYAKVTTPAA--ANLADIGNWVTLEFDDDQDEDTYELVGPAEAGMGAAKLAINSPL 123 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 A+ + VGD V P+G V AI P Sbjct: 124 GAAVRRHHVGDTVTVTAPSGTYQVTVMAISPHAP 157 >UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospira RepID=Q04UP0_LEPBJ Length = 927 Score = 141 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 1/151 (0%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 LVTR + K+E +L E PE +K + A GD ENA+Y+ +R ++ ++ Sbjct: 767 ILVTRRALNRKKEEFEHLLNVEMPENSKDIGEAQERGDLRENAEYKAAMERQVQLQAAIK 826 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDS 122 L +++ I+D + + K+ G +++N+ G + I+G + K IS S Sbjct: 827 RLEAEIKSAIILDLTNVKTDKINIGVTAKLKNESTGEVVAYSILGAWDADTEKHIISYQS 886 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 P+A++LL K+VGD AV+N E + V I Sbjct: 887 PLAKSLLGKKVGDAAVLNLTGAETRYTVLEI 917 >UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PP41_CHIPD Length = 157 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 1/152 (0%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 VT+E +++++EL++L + R E+ + + A GD ENA+Y K+ + +V Sbjct: 5 NYVTKETLDQMREELSFLKTKGRAEIARAIAEAREKGDLKENAEYDAAKEAQGMHEAKVA 64 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDS 122 L + +IV+ KV V I N + T +++V E + + IS+ S Sbjct: 65 ILESAIATARIVEADSIDTSKVSILCKVTITNMANKKTVTYQLVSEKEADLKLNKISVTS 124 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 P+ + LL K VG++A V+ P G + + I Sbjct: 125 PIGKGLLGKAVGEIADVHAPNGSLKFKIENIT 156 >UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31C12 Length = 154 Score = 140 bits (353), Expect = 1e-32, Method: Composition-based stats. Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 2/148 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T+EG + L+ EL L R E+ ++ A GD ENA+Y K+ ++ R+ L Sbjct: 7 ITQEGLDALRAELEQLETVARREIAARIRTAREWGDLKENAEYHAAKEDQAHLETRILKL 66 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 + N + + S V FG+ VE+E G R+ +VG E R +SI+SP+A Sbjct: 67 RERERNATVTEAS-SDVDIVAFGSTVEVETG-GKNARYTLVGAAEASARDGKLSIESPVA 124 Query: 126 RALLKKEVGDLAVVNTPAGEASWYVNAI 153 RAL+ G+ V TP+G V + Sbjct: 125 RALIGARAGEDVQVQTPSGARILRVVRV 152 >UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=Lactobacillaceae RepID=A5VME9_LACRD Length = 165 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 7/158 (4%) Query: 1 MKTPL---VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLRE 57 MK +T GY ++++++ L ++ RP +++ A +LGD SEN +Y K+ LR Sbjct: 10 MKNVYFQKMTANGYHEIEEQIAKLQQQ-RPAKIEQLKAARALGDLSENTEYSTAKRELRH 68 Query: 58 IDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVT-HRFRIVGYDEIFGRKD 116 ++ R+RYL K L+ +IV +P+ + + G V IE +D + IVG E K Sbjct: 69 LESRLRYLNKQLQYAEIV--TPKNDHTIDLGTTVTIEFEDDHEQETYHIVGKQEADLAKQ 126 Query: 117 YISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 IS DSP+ +A+L + G V P + +E Sbjct: 127 KISFDSPLGQAILHQTAGTTVTVEAPQSSYKVKIVKVE 164 >UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=GREA_MYCA5 Length = 159 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 77/154 (50%), Gaps = 3/154 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T + +++ ++ L YL RP+V +++ A + GD SENA+Y + + I+ Sbjct: 6 EKIYLTADSFKQYQERLQYLQEVLRPQVIEEIKEARNQGDLSENAEYDAARDKQATIENE 65 Query: 62 VRYLTKCLENLKIVDY-SPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 + + L+N +I+ + +Q V G+ V + + D F+IVG + IS Sbjct: 66 ITEIQHILDNYEIIKTQTNRQVSVVRIGSNVSVVSLKDDTVINFQIVGALDTDPFNGKIS 125 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 SP+A+A++ ++ G++ V P + + + Sbjct: 126 NTSPLAKAVIGRKAGEVVEVEAPN-KYQVKIVHV 158 >UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3Z7_9BACT Length = 609 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 1/157 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T +V+ E EK K E + L ++ PE K++ A S GD EN +++ K+ R + RR Sbjct: 452 QTLIVSWESMEKKKAEYDDLVNKKIPENVKEIQVARSYGDLRENFEFKAAKEMQRVLSRR 511 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISI 120 + L + D++ +V G V + E DG T + I+G + K +S Sbjct: 512 RAETERDLAQARGTDFANPDTAQVSVGTIVTLKETGDGRTDVYTILGAWDGDPDKGIVSY 571 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 S +A+AL+ + G+ V T G+ + + IE K Sbjct: 572 QSALAQALIGHKPGEQVNVPTEHGDRTARIEKIEAYK 608 >UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=Lactobacillus RepID=GREA1_LACPL Length = 156 Score = 139 bits (351), Expect = 2e-32, Method: Composition-based stats. Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 4/152 (2%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +T GY ++QE+ L ++ RPE + + AA+LGDRSENA+Y K+ L ++ R+R Sbjct: 6 NKMTAAGYHAIEQEIEDLKQQ-RPERIRILAAAAALGDRSENAEYSSAKRDLGRLESRLR 64 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDS 122 YL K L+ +IV + ++ G +V IE DD +++VG E + IS S Sbjct: 65 YLNKQLQYAQIVQPA--DNDQLDIGKFVTIEFLDDHDQITYQLVGKQEANLEQQKISFTS 122 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 P+ +AL V D+ VN P G V A++ Sbjct: 123 PIGQALANHTVDDVVTVNAPNGAYQVKVIAVK 154 >UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostridium RepID=B9E669_CLOK1 Length = 157 Score = 138 bits (349), Expect = 4e-32, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 2/153 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ ++T G +KL++EL YL +R E+ + A + GD SENADY K+ + Sbjct: 4 MQDVILTEAGKKKLEEELEYLKTVKRVEIKAALKAARAQGDLSENADYSAAKEDQSMTET 63 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYIS 119 R++ L L+N I++ S + ++ D +V E + IS Sbjct: 64 RIQELEYQLKNAVIIESS-LETDVFDINRTALVKFYDVDEVEEVTLVSSVESDVKNMRIS 122 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNA 152 I+SP+ +AL + +VGD A V +P G V Sbjct: 123 IESPLGKALFRLKVGDKATVISPDGNYDVEVEK 155 >UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostridium RepID=B2V1C0_CLOBA Length = 155 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 1/153 (0%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +T E +KL++EL Y +R E+ K+ AA+ GDRSENA+Y+ RE D R++ Sbjct: 3 NTLTEENMKKLQEELEYRLTVKRAEIAKEKLVAAAHGDRSENAEYKEACANYRENDNRIQ 62 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDS 122 YL + ++D + + + + I+ +D +V ++ ISI+S Sbjct: 63 YLMTMISTATVIDDTEIDKSSLGINSKARIKFVEDDDEDVITLVTTMDLDPENMLISIES 122 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + +AL+ K+ G+ V P + + + I Y Sbjct: 123 DLGKALMGKKAGETVEVEAPGAKYTVKILEILY 155 >UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514 RepID=B9XEY1_9BACT Length = 170 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 13/154 (8%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T +G ++L+ ELN L E+R + + G+ S N + ++ + + Sbjct: 29 AKNYLTPDGAQRLRAELNRLQAEKRSQT--------ATGEFSGN-----AQTEMQLVGQH 75 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + L + L +IV PQ +V FGA V + ++ G R+RIVG DE +D++S Sbjct: 76 ILQLEQSLATAEIVPPPPQPWEQVRFGATVTVRDESGNETRYRIVGVDETDIDRDWVSWL 135 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ARAL+ +G+ PAGE + +I Y Sbjct: 136 SPIARALINARIGERVHFRFPAGEKQLEIVSITY 169 >UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2N3_SALRD Length = 164 Score = 137 bits (346), Expect = 9e-32, Method: Composition-based stats. Identities = 50/154 (32%), Positives = 84/154 (54%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T +T EG E+LK+EL+ L EER + ++ A + GD SENA+Y K+ +++ R Sbjct: 10 ETVYMTEEGLEELKEELHQLKTEERSRIADEIAEARAKGDLSENAEYDAAKEEQGKLEAR 69 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 ++ + + +IVD S + K + + V +EN D G F +V +E ++ IS+ Sbjct: 70 IKQIEDTIARARIVDESTVDDSKAYILSDVTVENLDTGDEQTFTLVSEEEANISENKISV 129 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 DSP+ LL +E GD ++ PAG + + I Sbjct: 130 DSPIGEGLLAQEEGDEVSIDVPAGTVHFKIKDIS 163 >UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Mycoplasma RepID=GREA_MYCAP Length = 163 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 3/158 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + ++ E Y K K E L ERP V + A + GD SENA+Y + R E++RR Sbjct: 7 EKIYLSEETYNKYKNEYTELVTVERPAVQASLKEARAQGDLSENAEYDAARDRQSEVERR 66 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + L + LEN +I+D + K GA V N I+G + ++ IS Sbjct: 67 ILELERILENAEIIDTKSAVQNKAGIGATVRYLNMKTNKELVVTIMGPHDSNPIENKISN 126 Query: 121 DSPMARALLKKE-VGDLAVVNTPAGEASWYVNAIEYVK 157 +SP+A+A+++ +GD+ V P + + V I Y K Sbjct: 127 ESPVAQAIMEANGIGDVVEVEVPQ-KYNIKVLDISYAK 163 >UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipelotrichaceae RepID=B7CAB2_9FIRM Length = 162 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 6/159 (3%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + VT+EGY L E L + R EV ++ A + GD SENADY ++ +++ R Sbjct: 4 EKFYVTQEGYNDLVNEHENLVHKVRQEVIVELQEARAQGDLSENADYDAAREHQAQVEGR 63 Query: 62 VRYLTKCLENLKIVDYSP-----QQEGKVFFGAWVEIENDDG-VTHRFRIVGYDEIFGRK 115 +R L ++N +I+ S +++ V G+ V+I + F IVG E Sbjct: 64 IRELEAMIKNAEIITESADVEDKKKKNVVKLGSTVKILDLSDNQEVTFNIVGTIEADPFN 123 Query: 116 DYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +S +P+A ++ +VGD+ V + I+ Sbjct: 124 GKLSNTTPLAEVIMDHKVGDVCTVKRVEEPYDVKILEIK 162 >UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9R4_ACIC5 Length = 165 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 1/144 (0%) Query: 12 EKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLEN 71 +KL +++ L E E+ ++ AA+LGD SENA+Y K+R ++ R+ L K + Sbjct: 7 KKLLEDIKQLEHELAHELPAEIKKAAALGDLSENAEYHMAKQRQEFVNARLGQLKKRMAE 66 Query: 72 LKIVDYSPQQEGKVFFGAWVEIENDDGVTH-RFRIVGYDEIFGRKDYISIDSPMARALLK 130 L +V+ + +V FG+ VE+ + +++V +E K IS SP+ RAL+ Sbjct: 67 LSLVNLANIPHDRVAFGSTVEVFDTSKDEKIEYKLVTSEESDVSKGLISTTSPIGRALIG 126 Query: 131 KEVGDLAVVNTPAGEASWYVNAIE 154 K+VGD A V TP+G V + Sbjct: 127 KQVGDTATVVTPSGNRELEVLKLT 150 >UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0F0_ACIFD Length = 160 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 2/158 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +++ Y+ L QEL L + R E+ K + A +LGD SEN DY K +++ Sbjct: 1 MSEVEISQATYDALVQELEELTTQGRIEIAKAIEAARALGDLSENGDYHAAKDAQGKMEA 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGY-DEIFGRKDYIS 119 R+R + + L++ ++V + +V G V + + +VG +E + +S Sbjct: 61 RIRQIQQILQSARVV-SADLPTDEVRPGVVVGLRYEGEDDVEHYLVGSIEERHPGLEVVS 119 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 SP+ ALL VG P G V I +K Sbjct: 120 PTSPLGEALLGARVGAWVEYEAPRGTLKVQVVEIGPLK 157 >UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9H5_COPPD Length = 163 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 3/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + ++T EGY+K+ +EL YL +R EV +K+ A +LGD SEN++++ K+ ++ R Sbjct: 6 EEAILTEEGYKKILEELKYLKEVKRKEVAEKIQEARALGDLSENSEFEAAKEEQALLEER 65 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVG-YDEIFGRKDYIS 119 + L + N ++V +V G V + ++ G F IVG +E+ IS Sbjct: 66 IARLETLVYNARVVKAEDLALDQVSVGTKVLVLDESAGREESFIIVGNSEEVDPFSGKIS 125 Query: 120 IDSPMARALLKKEVGDLAVVNTPAG-EASWYVNAI 153 SP+ LL ++ GD + G +A + + I Sbjct: 126 SKSPLGSRLLGRKRGDRVEIKLRNGSKAVYEILDI 160 >UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIH5_9BACT Length = 159 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 53/155 (34%), Positives = 87/155 (56%), Gaps = 6/155 (3%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T+ G ++L++ +N L ERPEV K V A GD SENA+Y+ ++R R ID + Y Sbjct: 6 FITKTGMQRLQKRINELL-AERPEVIKAVAIAREFGDLSENAEYKAARERQRAIDNEIDY 64 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR-FRIVGYDEIFGRKD----YIS 119 L + NLK++D S + V FG + E+ + + +VG +E+ + +S Sbjct: 65 LRRRSANLKVIDTSEFPKDMVRFGTYCVAEDINTKECICYHLVGPEELNYYNEEGIQEVS 124 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 I SP+ +ALL K++G++A+V P GE + I+ Sbjct: 125 IVSPIGKALLSKKIGEIAIVKAPIGERKLKIREIK 159 >UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBD2_ELUMP Length = 156 Score = 135 bits (340), Expect = 4e-31, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 2/156 (1%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M+ ++R+ YEKL+++L L + +++ ++ AA GD ENA+Y K R E Sbjct: 1 MEKYYLSRKNYEKLREDLTALKEIK-AKLSLEIGEAAQQGDLRENAEYAAAKSRQEETLV 59 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYIS 119 +++ L + L N +I D + + GA V + + + + +VG E K +S Sbjct: 60 KIQDLEQKLRNAQITDDIQVDKSEARIGATVTVHDISADIDFTYTLVGSMESNPEKGLLS 119 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + SP+A ++L K+ G+ P G+ + + +EY Sbjct: 120 VQSPLAVSILGKKEGEEFEAVLPKGKKMYKLVKLEY 155 >UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Acholeplasmataceae RepID=GREA_ACHLI Length = 158 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 3/155 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K +T+ G ++LK EL +L +R E + + A GD SENADY + I+ R Sbjct: 5 KVYELTQSGLDQLKDELTHLKDVKRVENLEALKEAREQGDLSENADYDAARNEQARIEAR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 + + L+N+KI+ + V G V + + + +VG E + ISI Sbjct: 65 ILEIESILKNVKIIRTND-DSTTVNIGKKVLLHFVEKNKDVEYHVVGTIEADPKNFKISI 123 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEAS-WYVNAIE 154 +SP+ RA+ KEVGDL + + + S + AI Sbjct: 124 ESPLGRAIKGKEVGDLVQIKSATNKQSNVEIKAIS 158 >UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Bacilli RepID=GREA_STRP2 Length = 160 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 KT +T E EKL++EL L RPEV +++ A S GD SEN++Y+ K ++ + Sbjct: 4 KTYPMTLEEKEKLEKELEELKLVRRPEVVERIKIARSYGDLSENSEYEAAKDEQAFVEGQ 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISI 120 + L + +IV+ + +V G V I E + + IVG +S Sbjct: 64 ISSLETKIRYAEIVNSDAVAQDEVAIGKTVTIQEIGEDEEEVYIIVGSAGADAFAGKVSN 123 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+ +AL+ K+ GD A + TP G + +E Sbjct: 124 ESPIGQALIGKKTGDTATIETPVGSYDVKILKVE 157 >UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Thermotogaceae RepID=GREA_PETMO Length = 159 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 3/156 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +TREGYEKLK+E L + EV +++ A LGD SEN++Y+ K ID R Sbjct: 4 QVYQLTREGYEKLKREREELKKRLMGEVAERIKEARELGDLSENSEYEEAKNEQGMIDSR 63 Query: 62 VRYLTKCLENLKIVDY-SPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYIS 119 ++ + L+N +I++ V G V+I++ F +V E ++ IS Sbjct: 64 IKEIDYILDNAEIIENGGNHDNSTVSLGKKVKIKDYRLNREQEFVLVTPQEANIEENKIS 123 Query: 120 IDSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIE 154 I+SP+ R+LL ++ G++ + T G + I Sbjct: 124 IESPIGRSLLGRKKGEVINIKTARGSSKKIEIKEIS 159 >UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514 RepID=B9XT30_9BACT Length = 606 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 1/154 (0%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +V+ + E+ K E L +++ P +K++ A S GD EN +Y+ K+ + + RR Sbjct: 451 IVSWDSLERRKNEYAELVQKKIPANSKEIAIARSYGDLRENHEYKAAKEMQKILMRRKAE 510 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSP 123 L L + DY + V G V++ + + F I+G + K+ IS +P Sbjct: 511 LESELVRARGTDYLNPKTDAVSIGTIVKVTDLNSSHIEHFNILGAWDSDPEKNVISYLAP 570 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 +A++LL ++ G+ + + ++ I K Sbjct: 571 LAQSLLNRKPGEEVDYEMDGQKRRFRIDEITPYK 604 >UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Treponema RepID=GREA_TREPS Length = 162 Score = 133 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 1/153 (0%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 VT + K+EL L PE ++++ A LGD ENA+Y+ ++ ++ V L Sbjct: 9 VTAKMLNAKKKELQDLLDVRIPENSREIGRALELGDLRENAEYKAAREEQTRLNNMVTRL 68 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSPM 124 + +E ++ D + G+V FG + ++N G + I+G E + IS SP+ Sbjct: 69 QEEIERAQVFDPTTVVAGRVSFGTVISLKNHTSGEDETYTILGPWESAPERGIISYMSPL 128 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 LL ++ G+ E + + +I + Sbjct: 129 GSNLLNRKTGEQLAFTVGEHEKVYEILSISAAE 161 >UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Actinomycetales RepID=A0JU41_ARTS2 Length = 164 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 6/156 (3%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T+E +++LK EL++L R E+ +K+ A GD EN Y K+ +I+ R+R Sbjct: 11 WLTQEAFDRLKAELDHLSGAGRAEIVQKIEAARQEGDLKENGGYHAAKEEQGKIEARIRQ 70 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEI--FGRKDYISIDS 122 LT L + + + SP +G V G V G F ++G EI D S S Sbjct: 71 LTVLLRDAHVGE-SPADDGIVEPGMIVVAR-IAGDEETF-LLGSREIAGDSDLDVFSEKS 127 Query: 123 PMARALLKKEVGDLAVVNTPAGE-ASWYVNAIEYVK 157 P+ A++ + GD P G+ + + + + Sbjct: 128 PLGSAIVGHKEGDKLSYTAPNGKDITVEILSAKPYA 163 >UniRef50_B3DVF3 Transcription elongation factor GreA fused to uncharacterized associated domain n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVF3_METI4 Length = 614 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 2/152 (1%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +V+ E E+ K+EL+ L R++ PE +K + A S GD EN +Y+ K+ + RR Sbjct: 454 IVSWESLEQKKKELDELVRKKIPENSKDIAHARSYGDLRENHEYKAAKEMQVVLMRRKAE 513 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + + D+S V G V + T+ I+G + K IS + Sbjct: 514 LESMISRARATDFSNVDTTTVNIGTVVSYTDLKTNRTNSVAILGAWDSNPSKGIISYLAA 573 Query: 124 MARALLKKEVGDLAVVNTPAG-EASWYVNAIE 154 ++LL + GD+ V+ G ++ I Sbjct: 574 FGQSLLGHKTGDVLQVSLEDGITTEIRIDKIS 605 >UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDC6_THET1 Length = 159 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 48/152 (31%), Positives = 84/152 (55%), Gaps = 4/152 (2%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T +G ++L++EL L ER +++ ++ A GD SE+ +Y+ K ++ R++ L Sbjct: 9 LTEQGLKELREELERLRTVERAKISARIREAKEGGDISESGEYEDAKHSQAFLEGRIKEL 68 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKD---YISIDS 122 K L N +++D S Q G V G+ V +E ++G T+ + IV E +D IS S Sbjct: 69 EKLLANAEVIDRSAQPAGTVGLGSKVTVE-ENGRTYTYTIVDGAEAGRGRDGEVRISSKS 127 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 + ALL + VGD V PAG+ ++ + ++E Sbjct: 128 AVGSALLGRRVGDSVEVEVPAGKLTFKILSVE 159 >UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verrucomicrobia RepID=B1ZZX3_OPITP Length = 616 Score = 132 bits (333), Expect = 4e-30, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +V++ YE+ ++E + ++ PE +K + A GD EN++Y+ K+ + + Sbjct: 456 EQLIVSKASYERKREEYETIVSKKIPENSKAIAAAREHGDLRENSEYKMAKQEQQVLMAH 515 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 L + L +I D+ +V G VE+ + DG + ++G + K +IS Sbjct: 516 KTNLERDLGRARISDFKDASIDQVSVGTVVEVASVKDGHHTTYTVLGAWDGDPEKHFISY 575 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +P ALL K+ GD+ V T A + + + +I Sbjct: 576 KTPFGAALLGKKTGDVINVKTDASDEDYAIVSIA 609 >UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=Firmicutes RepID=GREA_STRPG Length = 160 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 1/154 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 KT +T E+L++EL L RPE+ +++ A S GD SEN++Y K ++ + Sbjct: 4 KTYPMTLTEKEQLEKELEELKLVRRPEIVERIKIARSYGDLSENSEYDAAKDEQAFVEGQ 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISI 120 + L + +I+D + +V G V + E + IVG IS Sbjct: 64 ISTLETKIRYAEIIDSDAVAKDEVAIGKTVIVQEVGTTDKDTYHIVGAAGADIFSGKISN 123 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +SP+A+AL+ K+ GD + +PA + ++E Sbjct: 124 ESPIAQALIGKKTGDKVRIESPAATYDVEIISVE 157 >UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87FB5 Length = 144 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 87/144 (60%), Gaps = 2/144 (1%) Query: 14 LKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLK 73 +++EL+ L + +RPE K ++WAA GDRSEN DY Y KK+LR+ID R+++L +E+ Sbjct: 1 MQRELSSLIKLDRPETVKVISWAAGNGDRSENGDYIYGKKKLRQIDSRIKFLLTAIEDAD 60 Query: 74 IVDYSP-QQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKK 131 IV S + KV+FGA V++ ++ T RIVG EI IS SP+A+AL+ + Sbjct: 61 IVHPSTSIDKKKVYFGANVKLLDEQSKSTLDIRIVGAHEINHNIGNISWLSPLAKALIGR 120 Query: 132 EVGDLAVVNTPAGEASWYVNAIEY 155 DL V TP ++ + ++Y Sbjct: 121 TSSDLIEVQTPMNIKTYIILKVDY 144 >UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MF39_PARUW Length = 723 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 80/157 (50%), Gaps = 5/157 (3%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + T EGY K++ + + E E +++ A +LGD EN+++++ ++R + Sbjct: 570 EEIWTTEEGYLKIQDRIRQIGTVEVVENAREIEAARALGDLRENSEFKFAQERRARLQSE 629 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 ++ L++ +I+ +V G+ +++ + G R+ I+G + K+ +S++ Sbjct: 630 LKTLSEQFGRARIITPDDILTDEVGIGSVIDLIDSQGQKIRYSILGPWDADPEKNILSLN 689 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAI-EYVK 157 S A+A++ K++GD + ++ V ++ Y++ Sbjct: 690 SKFAQAMIGKKIGDQFQFK----DETFKVLSLHSYLR 722 >UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Mycoplasma RepID=GREA_MYCH7 Length = 160 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 3/153 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 L+T++ E++++EL +L ER V +++ A S GD SENA+Y +++ I+ R Sbjct: 7 DKILLTQQKLEEIEKELEHLINVERVNVIQEIKDARSQGDLSENAEYDVAREKQGIIESR 66 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISI 120 +R L + KI+ + +V G+ V +EN + G F+IV + K IS Sbjct: 67 IRELETIISKAKIIK-ADLGSSRVSIGSKVSLENVESGEIQTFQIVSSIDADPFKSKISN 125 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 SP+A+ALL + GD V+ + S + + Sbjct: 126 FSPIAQALLGQHQGDEVEVDV-NEKYSVRILEV 157 >UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae RepID=C6WVB7_METML Length = 168 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 14/152 (9%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 VT G +L+ T + + A L AD + K ++ EI+R +R Sbjct: 29 NYVTPSGALELQ--------------TLEESLVAELNRLKLTADDTFAKDKVAEIERDLR 74 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 Y+ L++ +VD + Q V FGA +E+E+ G H F IVG DE + +S SP Sbjct: 75 YVRARLDSAILVDPTKQSHETVLFGATIEVEDGAGAQHTFHIVGEDEADASINKVSWVSP 134 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +A++LL ++VGD PAG + + I Y Sbjct: 135 LAKSLLGQKVGDTVTWQRPAGNINLEILDIHY 166 >UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPJ1_9BACE Length = 197 Score = 129 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 2/150 (1%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +TR+ + +++EL+Y RP++ + V A GD SEN +Y+ K+ + R+R Sbjct: 33 NELTRKDLQMMREELDYRRITLRPQLLEAVKEARGFGDLSENFEYKAAKQEKNRNESRIR 92 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISIDS 122 +L + ++ V V + +D T +++V IS +S Sbjct: 93 FLENMIRTAVVISDQAAP-DTVGLYDKVTVYLEEDDETETYQVVTTMRQDALHGRISKES 151 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNA 152 P+ ALL K VGD + + V Sbjct: 152 PVGSALLGKRVGDRIYIQVNDNYGYYVVIK 181 >UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bifidobacteriaceae RepID=B8DTJ6_BIFA0 Length = 160 Score = 129 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K L+T+E Y+K+K+EL + E R E+T+++ A + GD SEN YQ ++ + + R Sbjct: 6 KVVLLTQEAYDKMKEELAHREGEYRDEITERIAAARAEGDLSENGGYQAAREEQSKNEGR 65 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDY--IS 119 + L L N KI++ + G+V G+ V IE G ++ I G +I DY IS Sbjct: 66 INELIVKLRNAKIIE--APKAGEVGNGSLVTIE-LGGNEMQYVI-GSRDITVATDYDVIS 121 Query: 120 IDSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIEYVK 157 +SP+ A++ +VGD+ P G E S + E + Sbjct: 122 PESPIGGAIIGHKVGDVVTYKAPNGREISVTIKESEPLN 160 >UniRef50_UPI0001746370 transcript cleavage factor/unknown domain fusion protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746370 Length = 627 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 2/154 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 V+ + EK K EL L R + P+ K + A GD EN +Y+ ++ + R Sbjct: 464 VSWDSMEKRKIELEELVRVKIPQNKKDIQIAREYGDLRENFEYKSARQHQAVLLRMQSTY 523 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + L + D+ V G V++++ G T I+G + + +S S M Sbjct: 524 ERELRRARGTDFVGVSTETVGIGTIVDLQDVGTGKTETQTILGAWDGDPDQSILSYLSEM 583 Query: 125 ARALLKKEVGDLAVVNTPA-GEASWYVNAIEYVK 157 A+AL+ K VGD A + T G + +I + Sbjct: 584 AKALIGKRVGDEAELPTDTHGTRKVKIVSIRPYR 617 >UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pseudomonas RepID=Q4K5S3_PSEF5 Length = 197 Score = 128 bits (322), Expect = 7e-29, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 16/155 (10%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + VT +G +L+ +V S + +K+R+ E++R Sbjct: 59 QPNYVTPQGLAELQA---------------RVALLHSQHSEQNDLGDDADKQRMAELERD 103 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 +RY T+ L + ++V + KV G+ V ++ ++VG D+ K I+ Sbjct: 104 LRYFTQRLHSAQVVTTAN-STDKVQIGSRVTFADEQDRQQSVQLVGEDQADAAKGLINWA 162 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 SP+ RALL + GD + PAG + IE Sbjct: 163 SPLGRALLGAQPGDEVLWQRPAGNQLIEIIRIEPA 197 >UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Corynebacterineae RepID=GREA_RHOE4 Length = 164 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 7/160 (4%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T+E +++LK EL+ L RP + ++ GD EN Y ++ + + R Sbjct: 5 QVTWLTQESHDRLKNELDQLI-ANRPVIAAEINERREEGDLKENGGYHAAREEQGQQEAR 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGV--THRFRIVGYDEI--FGRKDY 117 +R L + L + K+ + +P Q G G+ V++ D T F I +E + + Sbjct: 64 IRQLQELLNSAKVGE-APTQSGVALPGSVVKVYYDGDESDTETFLIATREEGARDAKLEV 122 Query: 118 ISIDSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIEYV 156 S +SP+ ALL+ +VGD N P G + + E Sbjct: 123 YSPNSPLGGALLEAKVGDTREYNLPNGSTMKVTLLSAEPY 162 >UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VBG3_9CLOT Length = 195 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 3/152 (1%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +T +K+++E+ Y R E + V A + GD SEN +Y KK ++R+R Sbjct: 33 NQLTESDIKKMEEEIEYRKVVVRKEKLEAVKEARAQGDLSENFEYYAAKKDKNANEKRIR 92 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTH-RFRIVGYDEIFGRKDYISIDS 122 YL + + +I+ + +V V + ++ +RIV IS S Sbjct: 93 YLDRMVRTAEIIK-DESADDEVGLNNTVRVYFEEDEEEDTYRIVTTVREDVLNGIISNIS 151 Query: 123 PMARALLKKEVGDLAVVNTPAGE-ASWYVNAI 153 PM +ALL +VGD V G+ + I Sbjct: 152 PMGKALLGHKVGDRVEVVPGKGDPFHIVIREI 183 >UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia mucilaginosa RepID=D2NP88_9MICC Length = 189 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 13/167 (7%) Query: 1 MKTP---LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLRE 57 M +T++ +++L QEL YL R E+ ++ A GD EN Y + + Sbjct: 25 MAENTGAWLTQDAFDRLTQELEYLSGPYRQEIVDRIAQARDEGDLRENGGYHAARDEQAK 84 Query: 58 IDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDE------I 111 + R++ L LE I D +P +G V G +E E G T +F ++G E Sbjct: 85 NEARIKQLKHLLETAHIGD-TPADDGVVEHGMVIEAEV-AGRTLKF-LLGSREIEDTLPA 141 Query: 112 FGRKDYISIDSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIEYVK 157 S SP+ A++ + GD P G E S + + + Sbjct: 142 GSDLKVFSEKSPLGAAIMGAKQGDEVTYTAPNGKELSAKIISATPYQ 188 >UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5G0_9BACT Length = 698 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 76/158 (48%), Gaps = 5/158 (3%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + + + +++L EL+ + + PE + + A + GD EN+++ K+R + RR Sbjct: 537 EPNYTSVKSHKRLMAELDDIINVQVPENREALKVARAHGDFRENSEFDAAKERRNFLSRR 596 Query: 62 VRYLTKCLENLKIVDYSPQQ-EGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 L + L ++ + + E G+ +E+++++G ++++G + + ++S Sbjct: 597 RGELERELTRIQPISLKSVRVEDSAVIGSEIELQDENGEKEVYQLLGAWDGDPERRFLSY 656 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 + + +A+L ++VG G + + A+ + P Sbjct: 657 RTRLGKAVLNRKVGSEFS----DGSRQYKLIAVRPLSP 690 >UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK30_9BACT Length = 693 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 5/152 (3%) Query: 7 TREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLT 66 ++ Y+ L++E L E P+ +K + A GD EN +++ K R + + RV L Sbjct: 537 SQRSYKALQEEHERLVNTEIPDNSKAIAAAREHGDLRENFEFRAAKDRQKYLQLRVGELD 596 Query: 67 KCLENLKIVDYSPQQ-EGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMA 125 L + D+S + + +V A V I++ + T + IVG + K+++S ++P+A Sbjct: 597 AMLNKIGPTDFSEFKVKNRVIPAAKVTIKSPEAET-TYSIVGMLDGDPDKNWLSFETPLA 655 Query: 126 RALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 +++L +VGD P G+ + A+E + Sbjct: 656 KSMLGHQVGDSIE--LPGGD-EAEILAVEPLD 684 >UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Actinobacteria (class) RepID=GREA_SACEN Length = 162 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 5/157 (3%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T++ +++LK EL+ L RP + K+ A GD EN Y ++ ++ R Sbjct: 5 QVTWLTQDAFDRLKSELDELVGN-RPVIAAKINEAREEGDLKENGGYHAAREEQGHLESR 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDE--IFGRKDYIS 119 +R L + L K+ D P + G G+ + + DD ++ E G + S Sbjct: 64 IRQLQELLRTAKVGDV-PTEAGVAKPGSVLTVRYDDEDETEKFLLATREEGAHGDLEVYS 122 Query: 120 IDSPMARALLKKEVGDLAVVNTPA-GEASWYVNAIEY 155 SP+ +ALL + G+ P G + E Sbjct: 123 PSSPLGQALLDAKEGETREYELPNGGTMKVTLVKAEP 159 >UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R523_9CHLA Length = 731 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 72/152 (47%), Gaps = 4/152 (2%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 T T EGY + ++ + + E E +++ A SLGD EN++Y++ ++ + + Sbjct: 579 TIWTTEEGYLQTQERIRQIGTTEVVENAREIEAARSLGDLRENSEYKFALEKRSRLQGEL 638 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 + L++ L +I+ +V G+ VE+E+ + + I+G + + +S S Sbjct: 639 KRLSEQLNRARIITKDDIYLNQVSVGSIVELEDPEKNVVTYTILGPWDADADTNILSFQS 698 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 A A+L ++VG+ ++ + I+ Sbjct: 699 KFAEAMLGRKVGEEFEFR----NQNFTIRTIK 726 >UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Chlamydiaceae RepID=GREA_CHLPN Length = 722 Score = 126 bits (317), Expect = 3e-28, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 73/148 (49%), Gaps = 4/148 (2%) Query: 7 TREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLT 66 T E + ++K +L L +E + K++ A SLGD EN++Y++ ++ + +R L+ Sbjct: 571 TSESFSRMKAKLQSLVGKEMVDNAKEIEDARSLGDLRENSEYKFALEKRARLQEEIRVLS 630 Query: 67 KCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMAR 126 + + +I+ KV G V ++ D G + I+G + +S+ S +A+ Sbjct: 631 EEINRARILTKDLVFTDKVGVGCKVTLKGDAGEVVEYTILGPWDADPDSCILSLQSKLAQ 690 Query: 127 ALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +L K++ D+ ++ + ++ I+ Sbjct: 691 NMLGKKLNDVVILQG----KEYKISRIQ 714 >UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5K0_9BACT Length = 169 Score = 126 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 14/155 (9%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T +G E+L++EL L ++ E + + ++ LR + R Sbjct: 28 ARNRMTVDGAERLQKELAVLADQKAQ--------------LEETGEGEISRDELRRVTSR 73 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 ++ L++ L + +++ S + +V FG +V I + GV +RIVG DE+ +IS Sbjct: 74 MQALSQRLADAEVIAISESRGDEVRFGMFVTIRDAGGVEDEYRIVGVDEVDLEAGWISWL 133 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 SP+A+A++ +++GD+ PAGE ++ A+ Sbjct: 134 SPLAQAIVGRKIGDVVQFQAPAGEKKLHIVAVRPP 168 >UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomycetales RepID=B2GLP4_KOCRD Length = 165 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 10/158 (6%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T+E Y++LK+EL+Y+ R E+ ++ A S GD EN Y ++ + + R+ Sbjct: 8 WLTQEAYDRLKKELDYIAGPYRQEIVDRIEQARSEGDLKENGGYHAAREEQGKNEGRIVQ 67 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDE------IFGRKDYI 118 LT+ LEN ++ + +P +G + G V E G F ++G E + Sbjct: 68 LTQLLENAQVGE-APADDGVIEAGMVVTAE-IAGDEMTF-LMGSREVAEDLTGGEDLEVF 124 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGE-ASWYVNAIEY 155 S SPM A+ +VG+ P G+ + + + Sbjct: 125 SERSPMGAAINGHKVGETVSYQAPNGKDITVKILKAKP 162 >UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaeromyxobacter RepID=B4UMG4_ANASK Length = 169 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 56/157 (35%), Positives = 74/157 (47%), Gaps = 15/157 (9%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + VT EG L++ L L + AA L D A RL E+D R Sbjct: 27 EVRYVTPEGQAALREALARLRADR--------GDAARLPDAERPA-------RLGELDAR 71 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + L L L ++ EG+V FG WV +E +DG +R+VG DE R+ IS Sbjct: 72 IAALDATLGALTVLGPEATPEGQVGFGTWVTVEEEDGRRVTWRLVGPDEADARRGLISAG 131 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 SP+ARALL + GD+ VN P GEA V A+ P Sbjct: 132 SPVARALLGRRAGDVVEVNRPGGEAELTVVAVRRTAP 168 >UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxalobacteraceae RepID=A6STV7_JANMA Length = 175 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 9/155 (5%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +T +GY L+QEL L RP AA D ++ A + LREI++R+ Sbjct: 27 NYITPDGYRHLQQELQQLLDVARP--------AAMQMDAADTAMASAQEASLREIEQRIH 78 Query: 64 YLTKCLENLKIVDYS-PQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 YL +E+ ++VD S ++FFGA V+ EN G TH IVG DE+ + IS S Sbjct: 79 YLQTRVESAEVVDASVHADGDRIFFGASVDYENTAGETHTATIVGLDELDPAQGRISWLS 138 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 P+A++LL E GD ++ TPAG +V + Y Sbjct: 139 PLAQSLLGAEEGDTVLLQTPAGPEELHVLTVRYPA 173 >UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9BACT Length = 597 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 13/152 (8%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 +T G E+ ++ L L + + A+ D E + L ++R + Sbjct: 459 YMTAAGAERYRRRLQQLVQRRDELL------ASPDDDLPE-------RSELATLERELAQ 505 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPM 124 ++ L+ ++ + +V FGA V +E+D G RF++VG +E + ++ SP+ Sbjct: 506 VSAVLQGAIVIRLASPPRDEVRFGAEVVVEDDRGSRSRFQLVGENEAAPERGLVNWFSPL 565 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 RAL +G TPAG ++ V I Y Sbjct: 566 GRALAGARLGQRVEWTTPAGRGAYVVREISYP 597 >UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Corynebacterineae RepID=GREA_MYCVP Length = 164 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 7/160 (4%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T E Y++LK EL+ L RP + ++ GD EN Y +++ + + R Sbjct: 5 QVTWLTEESYDRLKAELDQLI-ANRPVIAAEINDRREEGDLRENGGYHAAREQQGQEEAR 63 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFR-IVGYDE---IFGRKDY 117 +R L + L N K+ + +P+Q G G+ V++ DD ++G E G+ + Sbjct: 64 IRQLQELLNNAKVGE-APKQSGIALPGSVVKVYYDDDEKDTETFLIGTREQGVSDGKLEV 122 Query: 118 ISIDSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIEYV 156 S +SP+ AL+ +VG+ P+G + + E Sbjct: 123 YSPNSPLGGALIDAKVGESRSYTVPSGNTVKVTLVSAEPY 162 >UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Firmicutes RepID=C4ZAT8_EUBR3 Length = 167 Score = 122 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 3/151 (1%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +T +K++ E+ Y R + V A + GD SEN +Y+ K+ + + R+RYL Sbjct: 5 LTANDIKKMEDEIEYRKLVVRKKALDDVKVARAQGDLSENFEYKAAKQFKNQNESRIRYL 64 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVT-HRFRIVGYDEIFGRKDYISIDSPM 124 K ++ ++ ++ +V V++ +D ++IV K+ IS +SP+ Sbjct: 65 EKMIKTAVVI-SDESKDDEVGMFNTVDVYFEDDDETETYKIVTTVRGNSLKNLISKESPL 123 Query: 125 ARALLKKEVGDLAVVNTPAG-EASWYVNAIE 154 A+ +VGD V + I+ Sbjct: 124 GAAIFGHKVGDRCEVKVNDDYSYFVKIMKIQ 154 >UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZQE9_OPITP Length = 166 Score = 122 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 50/153 (32%), Positives = 69/153 (45%), Gaps = 13/153 (8%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +T G E+L +ELN L ERP + + K+ LR++D R Sbjct: 27 AKRYLTEAGAERLHEELNRLRTVERPALAGAAADLDA-------------KRELRKLDER 73 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 R L + L +I+ V FGA V ++ +DG T +RIVG DE IS Sbjct: 74 ARELQQILATAEIISSPAPDRSIVRFGAKVTVKEEDGTTSTYRIVGIDETEFYTGGISFQ 133 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+A+ALL VGD +PAG + IE Sbjct: 134 SPLAQALLGASVGDRIQFQSPAGPRQLEIQLIE 166 >UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNZ9_AKKM8 Length = 615 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 3/156 (1%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + V+ E E K+EL L + PE + + GD EN YQ K+ + ++RR Sbjct: 457 EPIFVSWESLEARKKELEELVNVKIPENLHNKKISRAEGDLRENGGYQDAKEVEKVLNRR 516 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVT-HRFRIVGYDEIFGRKDYISI 120 L L + D++ + G V ++ +G + I+G + K +S Sbjct: 517 RAELEHALALARGTDFAVTDTSRAAMGTKVTLQPLNGGEPVVYTILGAWDTNPEKHIVSY 576 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEAS--WYVNAIE 154 S + + L K VGD + G+ + + IE Sbjct: 577 LSQVGKELTGKSVGDQVKIVPMDGDKKKVYTITKIE 612 >UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bifidobacterium RepID=A1A150_BIFAA Length = 159 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 7/159 (4%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 KT L+T+E Y+K+K+EL + E R E+ KV+ A + GD SEN YQ ++ R R Sbjct: 5 KTILLTQEAYDKMKEELAWREGEYRDEILSKVSAARAEGDLSENGGYQAAREAQRVNQGR 64 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDY--IS 119 + LT L N KI+ + + G+V G+ V +E +G + + G ++ DY IS Sbjct: 65 IDELTVKLRNAKIL--TAPKAGEVGDGSLVTLEV-NGREMVYVL-GTRDLSIATDYSIIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIEYVK 157 +SP+ A+ GD P G E S + + + Sbjct: 121 PESPIGAAINGAHAGDTVTYTAPNGREISVTIKEAKPLA 159 >UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=Q0PQI1_9GAMM Length = 166 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 66/125 (52%), Positives = 89/125 (71%), Gaps = 1/125 (0%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 K+P +T +G+++L E LW+ R EV K ++ AA+ GDRSENA+Y Y KK LREIDRR Sbjct: 35 KSPYITSDGHQRLLAEEQGLWKRRR-EVVKALSAAAAEGDRSENAEYIYRKKELREIDRR 93 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 +RYL K + LK+V+ P +VFF AWV +E++ GVTHR+RIVG DEI + DYIS+D Sbjct: 94 IRYLQKRIPELKVVEQPPSNRQQVFFAAWVTLEDEQGVTHRYRIVGPDEIDHQADYISMD 153 Query: 122 SPMAR 126 SP+ Sbjct: 154 SPLGA 158 >UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ureaplasma RepID=GREA_UREP2 Length = 156 Score = 121 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 1/154 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +++ E+L+ EL + + P +TK++ A GD SENADY K + + Sbjct: 1 MAKYTISKHRLEELQLELREILDVKWPAITKQLQDAREQGDLSENADYDAAKNEQAALKK 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYIS 119 R + + LEN ++++ + +V G+ +EI N +VG + + IS Sbjct: 61 RKDEIEEILENYELIEDVLRSTDEVSIGSTIEIYNYQKDCEEVITLVGSMDSDPFANKIS 120 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 ID+P+ +AL+K++ G V+T A + I Sbjct: 121 IDTPLGKALVKQKKGTEVTVHTLASPYKVKIIKI 154 >UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodobacter sp. SW2 RepID=C8S319_9RHOB Length = 167 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 68/155 (43%), Gaps = 15/155 (9%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 VT G L+ L E ++ + +R + +R +R Sbjct: 26 NYVTPRGLALLQTRLA--------EAQARLAALRARPERLDKLPEAAA-------ERDIR 70 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 YL L + VD S Q G+V FGA VE+ DG ++I G DE ++ I+ SP Sbjct: 71 YLEARLRSAIPVDPSSQPAGEVAFGARVEVALADGSRQVWQITGEDEADATQNRIAPQSP 130 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP 158 +ARALL EVGDL + P+G V AI Y P Sbjct: 131 LARALLGAEVGDLVIWRKPSGPVELEVLAIAYADP 165 >UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh1 n=6 Tax=Thermaceae RepID=Q5SJG6_THET8 Length = 156 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 6/155 (3%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T+ GYE+L Q+L RE E TK + D +++ + K+ I+ R Sbjct: 3 REVKLTKAGYERLMQQLER-ERERLQEATKILQELMESSDDYDDSGLEAAKQEKARIEAR 61 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRK--DYI 118 + L L I++ + G+ VE+E+ G ++V E I Sbjct: 62 IDSLEDILSRAVILEEG--SGEVIGLGSVVELEDPLSGERLSVQVVSPAEANVLDTPMKI 119 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 S SPM +ALL VGD+ ++TP G + V AI Sbjct: 120 SDASPMGKALLGHRVGDVLSLDTPKGRREFRVVAI 154 >UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB family n=2 Tax=Cystobacterineae RepID=Q1CX76_MYXXD Length = 167 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 15/156 (9%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T EGY L++EL + P+ + A + + Sbjct: 26 EKRYITPEGYRALQEELAAAQGPD-PKAGEFTELEAGVRRKERERRV------------- 71 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + L LE++++V+ Q G+VFFGAWVE+E++DG R+RIVG DE + +S++ Sbjct: 72 -QELAAVLEDVRVVEPDASQAGRVFFGAWVELEDEDGGPVRYRIVGPDESDVKAGRLSVE 130 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 SP+ARALL KEVG+ VV+ P G + V A++Y Sbjct: 131 SPLARALLGKEVGESVVVDRPRGPVEYTVTAVDYAA 166 >UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobacillus fermentum RepID=D2KXD7_LACFE Length = 303 Score = 117 bits (295), Expect = 8e-26, Method: Composition-based stats. Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 10/138 (7%) Query: 1 MKTPL---VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLRE 57 M +T GY +++++ L + +RP + ++ A LGD SEN +Y K+ LR Sbjct: 12 MAKIYYQEMTPAGYRAIEEQIEALKQ-KRPTLIARLKAARVLGDLSENTEYSTAKRELRH 70 Query: 58 IDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTH-RFRIVG---YDEIFG 113 ++ +RYL K L K++D S +GKV G V I D ++IVG ++ Sbjct: 71 LESCLRYLDKQLTYAKVIDVS--DDGKVALGKVVTIRFLDDQEEATYQIVGRYQAEQASL 128 Query: 114 RKDYISIDSPMARALLKK 131 ++ ++ DSP+ AL K Sbjct: 129 TEEVLAFDSPLGLALKGK 146 >UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L6P4_EXISA Length = 152 Score = 117 bits (295), Expect = 8e-26, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 4/154 (2%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 P +T G+ +L L L R ER + +++ A D E+ Y ++ I+ + Sbjct: 2 KPKLTETGHHQLTDRLVMLRR-ERTDARERLRTARKFCDFREDVTYTEAVRQYERIEADI 60 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISID 121 L L++ IV+ Q V FG V I T R+RIV E + IS+ Sbjct: 61 LELNHLLDDATIVES--VQSEVVTFGNRVVIREVQQEETERYRIVSEAEADLERGSISVT 118 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+ R L+ +G V TP G V IE Sbjct: 119 SPLGRRLMGATMGQTIQVETPGGTIQVEVLHIEP 152 >UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X3W9_FLAB3 Length = 183 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 16/155 (10%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 VT G E L+QE L E+ D S +Y+ ++ R Sbjct: 44 AENWVTPAGMEALQQERADLISEQ------------EKLDPSHEREYRIA---FNHLNAR 88 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGV-THRFRIVGYDEIFGRKDYISI 120 ++ L + + KI+D + +G+V FGA V +N + F++VG DE K ++ Sbjct: 89 LQLLNGRMASAKIIDTARLSQGEVHFGATVTFKNLNNNLRQTFQLVGVDEANISKGKLAF 148 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +P+A+AL+ +VG+ + + + +I Y Sbjct: 149 TTPLAKALINSKVGEKVTLQLGDKTNIFEILSIGY 183 >UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clostridiales RepID=A9KJU6_CLOPH Length = 167 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 69/150 (46%), Gaps = 2/150 (1%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +T+ +K+++E+ Y R E V A + GD SEN +Y KK + + R+R Sbjct: 3 NRLTKNDIDKMQEEIEYRKLTVRKEAIDAVKEARAHGDLSENFEYYAAKKDKNKNEGRIR 62 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVT-HRFRIVGYDEIFGRKDYISIDS 122 YL + ++ ++++ E ++ V I ++ +++++ + ISI+S Sbjct: 63 YLERMIKTAEVIE-DHSSEDEIGINNTVSIYFEEDNEIEKYKLITTVRENSLQGLISIES 121 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNA 152 P+ +A+L +V D V + + Sbjct: 122 PLGKAILGHKVEDRVYVKVRDDYGYYVIIK 151 >UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostridium acetobutylicum RepID=Q97HP4_CLOAB Length = 158 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 4/144 (2%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 ++T+ Y+KLK+E Y +R E+ KK AA+ GDRSENA+Y+ K+ +RR+ Sbjct: 4 MLTKSDYDKLKEEYEYRNTVKRHEIAKKKMEAAAFGDRSENAEYKAAKEEYYHNNRRLGQ 63 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEI---FGRKDYISID 121 +++ L+N IV+ +V G+ + ++ T + ++V I +YIS+D Sbjct: 64 ISRLLKNAIIVEEDKID-DEVNIGSEMLLKIGADETFKAKLVTTLNISVEDEDIEYISVD 122 Query: 122 SPMARALLKKEVGDLAVVNTPAGE 145 SP +AL KK VGD VN P Sbjct: 123 SPFGKALYKKHVGDSIDVNLPDNR 146 >UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RPW8_9ACTO Length = 166 Score = 116 bits (290), Expect = 4e-25, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 64/156 (41%), Gaps = 9/156 (5%) Query: 5 LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 ++++ +++L+ EL+ L RP + ++ GD EN Y ++ + + R+ Y Sbjct: 12 WLSQDAHDRLQAELDELI-ANRPAIAAEINARREEGDLRENGGYHAAREEQGKQEGRILY 70 Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN--DDGVTHRFRIVGYDEIFGRKD--YISI 120 L + L ++ + V G V I D T F ++G EI + S Sbjct: 71 LKELLRTAQVGE--APSADTVSPGMVVTIYFDDDTDDTETF-LLGSREISSTTELTVYSP 127 Query: 121 DSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIEY 155 +S + +++L G P+G + V E Sbjct: 128 ESALGKSILGTRPGQTVTYTAPSGADIKVTVVRFEP 163 >UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desulfuromonadales RepID=B5EI69_GEOBB Length = 143 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 1/106 (0%) Query: 51 NKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYD 109 + + ++ L + L ++VD + + + V +++ D + +V + Sbjct: 28 ARSTQTRDSKNLKELGEELVRAEVVDPAGIPPDVITMNSKVCLQDLDSEEELVYTLVFPN 87 Query: 110 EIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 E ISI +P+ A++ GD P G + V I Y Sbjct: 88 EADLASGKISILAPVGTAMIGFRTGDRITWPVPGGMKNLKVKKILY 133 >UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QK34_9SPHI Length = 171 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 15/156 (9%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 VT G L+ E L +E T+ L D +E ++L ++ + Sbjct: 27 SVNYVTPRGLAMLRDEFEKLEKEHALAQTQ-------LTDENERT------RQLALLNGQ 73 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD--GVTHRFRIVGYDEIFGRKDYIS 119 + L + + K+V+ +V FGA V + + + IVG DE I+ Sbjct: 74 IAALNQRIATAKVVNMQDHPLDEVRFGATVTLSSQSTGKADQQLTIVGVDEADAIHGRIA 133 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +P+AR LL K+VGD + TP GE + + +I Y Sbjct: 134 FPAPIARLLLGKKVGDFITLRTPRGENALEITSIYY 169 >UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Tax=Flavobacteriaceae RepID=A0M1N1_GRAFK Length = 166 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 16/154 (10%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 T VT G +LKQEL L E E + ++ ID ++ Sbjct: 28 TNYVTPNGLAELKQELKDLEYERA---------------HVEAENDTEKRRAQSLIDGKI 72 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISID 121 L++ L+ +++D Q + ++ FGA V++ N+ G F+IVG DE +K I+ Sbjct: 73 NLLSERLQTARLLDSKDQPKDEIRFGARVKLTNETSGQLQEFQIVGVDEADIKKKKIAFV 132 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +P+A+A+ ++VG+ V I Y Sbjct: 133 APIAKAVTGRKVGEEIDFKLGNEIRKLKVLGITY 166 >UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11P04_CYTH3 Length = 149 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 1/107 (0%) Query: 50 YNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGY 108 K+ L L+ K+V+ V + V I D F++V Sbjct: 33 EAKQFKSISVVEANSLMNELKLGKLVEPEEIPNNVVTMHSIVTIVFMDSNKRVEFQLVYP 92 Query: 109 DEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 D+ + + ISI SP+A AL+ ++GD PAG + +I Y Sbjct: 93 DKADVKNNKISIFSPIATALIGYQIGDEIEWCVPAGMTKIKIESIAY 139 >UniRef50_Q88Q22 Transcription elongation factor, putative n=11 Tax=Pseudomonas RepID=Q88Q22_PSEPK Length = 165 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 16/152 (10%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + VT G +L+ + L + ++ GD K+RL + +R Sbjct: 26 QPNYVTASGLRQLQTRVAELN-----ALRSELQAQGERGD----------KQRLADTERD 70 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 +RY + +++ ++V + KV G+ V + ++VG DE I+ Sbjct: 71 LRYFSARVQSAQVV-PAATSHSKVQIGSRVRFVDAQDQEQVVQLVGEDEADAGHGLINWG 129 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 SP+ RALL GD V P GE V I Sbjct: 130 SPLGRALLGAGPGDEVVWRRPVGEQVIEVVEI 161 >UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobacter sphaeroides RepID=B9KMW2_RHOSK Length = 164 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 15/154 (9%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 LVT G L+ L ++ + DR + +R +R Sbjct: 26 NLVTPRGLADLQARL--------LATQARLRALRAREDRLDRLPEAAA-------ERDIR 70 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 YL + + +VD + Q +V FG V +E++ G + I G DE I+ +P Sbjct: 71 YLEARIASAILVDPAAQPLDEVAFGLAVTVEDEAGRRTVWEITGEDEAQATARRIAPQAP 130 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 +ARAL+ +G+ V PAGE + V I + + Sbjct: 131 LARALMGARLGEKVVWTRPAGEVTLTVTGIAHPE 164 >UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bacteroidetes RepID=A3HZU2_9SPHI Length = 166 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%) Query: 3 TPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRV 62 T VT G E+L+ E L E+ + I ++ Sbjct: 28 TNYVTETGMEELQAEKQALIEEKSNLTAATEQEKRIASN---------------FISAKI 72 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISID 121 + L + + KIVD S Q + ++ FGA V ++ +++VG DE K+ IS Sbjct: 73 KLLDERIATAKIVDLSEQPKNEIRFGAKVTLKIGKSPKAMTYQLVGVDEADISKNKISFI 132 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SP+A L+ K+VG+ A ++ G+ + V I+Y Sbjct: 133 SPIAMILIGKKVGEKATLSLTKGDRVFEVMEIKY 166 >UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABM5_GEMAT Length = 161 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 67/144 (46%), Gaps = 1/144 (0%) Query: 12 EKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLEN 71 ++ +E+ L E + ++ A LGD EN++Y+ +R + + R+ LT+ + Sbjct: 7 AQMAREVEKLQFELNVTLPNEIRKAVELGDLKENSEYKAALERQQFVQARLGQLTQRVTK 66 Query: 72 LKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLK 130 L +D + +V G+ V +E+ + +V D ++++ SP+ RAL Sbjct: 67 LANIDITQIPGDRVGLGSKVIVEDLQSKARETYELVFGDAGELHDGHVTMGSPIGRALQG 126 Query: 131 KEVGDLAVVNTPAGEASWYVNAIE 154 K VG+ A++ P + ++ Sbjct: 127 KSVGEEAILKLPTRIRKLQIVELQ 150 >UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Z9_METFK Length = 138 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 1/95 (1%) Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISI 120 + L L + V V + V + ++ +G +V + + IS+ Sbjct: 34 LARLEDELARSEEVPSEQVGADVVTMNSRVLLRDEANGHEMSCTLVFPSDADASANRISV 93 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +P+ A+L VGD+ P G + + I+Y Sbjct: 94 VAPLGTAILGYRVGDVIDWAMPGGVRQYRILKIDY 128 >UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococcus radiodurans RepID=Q9RRW0_DEIRA Length = 183 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 65/161 (40%), Gaps = 9/161 (5%) Query: 1 MKTP-LVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREID 59 M P +T EG +L+ L + R E ++V + +E+ D ++ L ++ Sbjct: 24 MTQPLPLTPEGLSRLQAALE--REQARREEARRVVQEQMEANENESLDLAAAQETLGAVE 81 Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKD-- 116 R+ L L ++ +G+ G+ V + N G +V E Sbjct: 82 ARIEELEDQLARAVVLAPGAGNDGRAAVGSRVTLLNIGLGRELPLHLVSAAEAAAGPGTS 141 Query: 117 ---YISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +S +SP+ RALL + G+ V+ +A + V +E Sbjct: 142 GVALVSTESPVGRALLGRRAGEEFTVDLGRTQAQYRVLMVE 182 >UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9 Tax=Gammaproteobacteria RepID=Q3BX42_XANC5 Length = 146 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 2/91 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSP 123 L+ L +++ V + +E E+ G H +V E + IS+ +P Sbjct: 41 LSDELGRARVLPPDQIPGDVVTMHSRIECEDQLHGERHTLTLVYPHEADVQHGRISVLAP 100 Query: 124 MARALLKKEVGDLAVVNTPAGE-ASWYVNAI 153 + ALL VG TP G V A+ Sbjct: 101 VGSALLGLSVGQSIDWRTPDGRDLRLRVTAV 131 >UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cellular organisms RepID=C6B1R3_RHILS Length = 160 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 21/152 (13%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREID-RRV 62 LVT G + L+ + A D + + ++R R + Sbjct: 29 NLVTEAGLKALELQFQQ---------------AREAYDAASPIEDVNERRRQAASPLRDL 73 Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 RYLT L +++ SP V FG+ V DDG +RIVG DE + IS S Sbjct: 74 RYLTARLRTAQLM-PSPTSIDTVAFGSTVTFRRDDGRVQTYRIVGEDEADPKAGSISYVS 132 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 P+AR L+ K VGD+ G + AI Sbjct: 133 PVARLLMGKAVGDMVE----TGGQELEIIAIA 160 >UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Proteobacteria RepID=C5S652_CHRVI Length = 171 Score = 107 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 29/94 (30%), Gaps = 2/94 (2%) Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVT-HRFRIVGYDEIFGRKDYISIDS 122 L L ++VD V + V +V ++ ISI + Sbjct: 68 ELEAELARAEVVDPREMPPNVVSMNSTVRFRVMSTNEAFTLTLVYPKDMDASGGKISILA 127 Query: 123 PMARALLKKEVGDLAVVNTP-AGEASWYVNAIEY 155 P+ ALL GD P G + + Y Sbjct: 128 PVGSALLGLSSGDEIEWPKPGGGVLRVRIEEVTY 161 >UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betaproteobacteria RepID=B6BTF1_9PROT Length = 164 Score = 107 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 15/152 (9%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 VT G+++LK+ ++ + ++ L D EN K+ +++R +R Sbjct: 28 NYVTPNGHKQLKETIHLIET--------EIKSIKELEDSPEN------KQNKMKLERDLR 73 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 Y K E ++D + KV FGA V + +++ ++F+IVG DE +++ +S SP Sbjct: 74 YYLKRFETAILIDKHEEN-NKVLFGAHVILIDENDEAYKFQIVGEDEADIKQNKLSYVSP 132 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +A+ L+ +GD V G ++++I Y Sbjct: 133 LAKELIGSLIGDEVVWKRADGNRVVFIDSINY 164 >UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltaproteobacteria RepID=Q2LTP9_SYNAS Length = 134 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 2/95 (2%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISID 121 R L L N +V V + V E+ G +V + +S+ Sbjct: 30 RSLEAELVNAVVVPSEEMPPDVVTMNSCVCFEDLTTGNRETITLVYPGQANMASGRVSVL 89 Query: 122 SPMARALLKKEVGDLAVVNTPAG-EASWYVNAIEY 155 +P+ AL+ VG P G + + + Y Sbjct: 90 APVGSALIGLSVGQTIEWPMPNGRKRRLRIVEVLY 124 >UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CMB9_9FLAO Length = 139 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 45/93 (48%) Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 ++ L L++ KIVD + Q V F + + + +++G + R ++V E KD ISI Sbjct: 35 IQKLLTELDSAKIVDEAEMQNDVVRFHSIITVTSENGWSRRVQLVLPPERDVSKDKISIL 94 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +PM AL GD P+G + +E Sbjct: 95 TPMGIALFGYAEGDTVSWEFPSGPKRLRIEKVE 127 >UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1IXC6_DEIGD Length = 158 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 5/156 (3%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + +T EGY +L++ L + T D E+ +Q + L ++ R Sbjct: 3 EEIPMTAEGYRRLQETLEKERQRLEDATTSMAATLDDAMDL-EDRSFQAAQYDLPTMEAR 61 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKD---Y 117 + L L IV+ ++G V G+ V + ++ R ++V E+ + Sbjct: 62 ILELEDVLARAVIVEEPQARDGGVALGSVVVLRDEQHDRELRVQLVSAVEVDALAEGATQ 121 Query: 118 ISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 +S DSP+ +ALL + G+ V+ + A + V +I Sbjct: 122 VSEDSPVGKALLGRRAGESFEVDLGSSRARYTVKSI 157 >UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacteria RepID=A0LL17_SYNFM Length = 141 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 1/97 (1%) Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYI 118 + ++ L + L ++V V + V +++ D G+ + +V E +++ I Sbjct: 35 KHLQVLEEELRKAEVVAARNIPRDTVTMNSKVRVKDLDTGIETIYHLVFPGEADVKQNRI 94 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 S+ +P+ AL+ VGD+ N PAG + I Y Sbjct: 95 SVLAPIGTALIGYAVGDVIQWNVPAGTKKLRIEEILY 131 >UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax=Alphaproteobacteria RepID=B9J7D6_AGRRK Length = 160 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 19/151 (12%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 L+T G + L+ +L A+++ D +E R +R Sbjct: 29 NLMTEAGLKALELQLQQ--------ARAAYAAASTIEDVNERRRQAAGP------LRDLR 74 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 YL + + + + +P V FG+ V DDG +RIVG DE + IS SP Sbjct: 75 YLAERIRTAQPI-PAPASIDIVAFGSTVTFSRDDGRVQTYRIVGEDEADPKTGSISFVSP 133 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +A+ L+ K VGD+A V G+ + AI Sbjct: 134 VAKLLMGKSVGDVASV----GDQELEIIAIA 160 >UniRef50_C6UNA6 Putative transcription elongation factor GreA n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UNA6_HODCD Length = 155 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 1/139 (0%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +T GY L +LN+ + ++P + ++ A SLGD SENADYQ ++ + + Sbjct: 1 MAATTLTALGYISLVAQLNWRRQHKKPALKAQLKAARSLGDLSENADYQAARREDKLNEA 60 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI 120 R+ + + L K + + + + + V ++ DG F IVG DE + + + Sbjct: 61 RINEILQTLARAK-LAPARSAANRPSYNSTVVLKRADGKLLAFNIVGDDEAIATEANVGL 119 Query: 121 DSPMARALLKKEVGDLAVV 139 S +AR L K+VGD+ VV Sbjct: 120 SSDVARQCLNKKVGDVVVV 138 >UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5Q8_FLAB3 Length = 170 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 1/108 (0%) Query: 49 QYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR-FRIVG 107 KK L + L + KIV+ + V + V+I ++ T F+IV Sbjct: 53 MDAKKNNSIKAEDAERLLRELHSAKIVESADIPADVVTMNSVVKIHFENNKTVTEFKIVY 112 Query: 108 YDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 ++ + ISI SP+A AL+ V D P+G ++ I Y Sbjct: 113 PEQANIKDRKISIFSPVAAALIGYSVNDEIDWIVPSGMTKIIIDEIIY 160 >UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphingobacteriales RepID=C6VSR5_DYAFD Length = 134 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 1/92 (1%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L L +V+ + G + ++V++ E F IV + K ISI +P Sbjct: 36 LAYELNRAVVVEDNELPAGSIRLNSYVKVRETTTNKEMAFSIVMPKDADIAKQRISILTP 95 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 M AL+ G+ PAG + + + Y Sbjct: 96 MGAALIGLCKGETVEWKMPAGIRRFKILDVWY 127 >UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SEQ9_LEPBA Length = 138 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%) Query: 54 RLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVT-HRFRIVGYDEIF 112 + + D V+ L +E + VD V + +EI+N +G+ FR+V ++ Sbjct: 26 KRNKTDANVQDLLGEIERAQKVDSKQIPSNVVTMNSVIEIKNLEGIEFKEFRLVYPEDSN 85 Query: 113 GRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 ++ ISI +P+A A + + GD+ N P G + + I+Y Sbjct: 86 LDQNQISILAPIATASIGYKTGDVIFWNVPDGVYRFQITEIKY 128 >UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desulfitobacterium hafniense RepID=B8G0E1_DESHD Length = 138 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 48/136 (35%), Gaps = 15/136 (11%) Query: 21 LWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQ 80 + +R + K + G K + ++ L L +V Sbjct: 7 ITAVDRERLLKLINKEREFG---------SAKNK-----DYLKDLEHELNGADVVPSEKI 52 Query: 81 QEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVV 139 + + + +++ + G + +V ++ +D ISI +P+ A+L GD+ Sbjct: 53 PGNAITMNSRILLKDLETGEETVYTLVYPEDADLLEDKISILAPVGTAILGYLEGDIIDW 112 Query: 140 NTPAGEASWYVNAIEY 155 P G + V I Y Sbjct: 113 KVPGGVVRFKVEKILY 128 >UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=uncultured bacterium URE4 RepID=C0JZV3_9BACT Length = 112 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 1/102 (0%) Query: 54 RLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGV-THRFRIVGYDEIF 112 R ++ ++ L + + N +++D S V + V +EN + +F+IVG E Sbjct: 10 RQGLLEVKIARLKEKVANARVIDESKLSADTVQLLSKVTVENMNAKMKMQFQIVGESEAD 69 Query: 113 GRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 K +S +P+ +AL+ G++ P+G + + I Sbjct: 70 FSKGLLSASTPIGKALMGHGKGEVVEAKVPSGIMKFKILDIS 111 >UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Brucella RepID=A9MBQ4_BRUC2 Length = 169 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 36/104 (34%), Gaps = 1/104 (0%) Query: 51 NKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDE 110 + L L+ K+V E V G+ VE +DG R +V E Sbjct: 25 ASNASERFEEIAEELMAELDRAKVVTAKRIPENVVQMGSTVEFRANDGHERRVTLVYPGE 84 Query: 111 IFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEA-SWYVNAI 153 K+ ISI +P+ AL+ G G+ V + Sbjct: 85 ADIAKNRISILTPIGTALIGLAPGQSISWTARDGKQHELNVLKV 128 >UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococcineae RepID=Q83FN6_TROWT Length = 172 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 6/156 (3%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 +++E + L EL L R E+ K++ A S GD EN Y K+ I+ R Sbjct: 15 SETWLSKEAHSVLVVELEELVTTGRKEIAKRIEQARSEGDLRENGGYSAAKEEQARIEGR 74 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDY--IS 119 ++ L L + ++ +P+ G V G V G RF ++G EI S Sbjct: 75 IQQLQDLLRHARVG-QAPKARGVVEPGVVVTAR-IGGSERRF-LLGNREIAHTSSLATYS 131 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 S + +A+L + G +P G + +E Sbjct: 132 ESSAIGQAILGLKEGSEIECKSPTGALIKVAILKVE 167 >UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizobiales RepID=A6X582_OCHA4 Length = 142 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 1/105 (0%) Query: 51 NKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDE 110 ++ L L+ K+V + + G+ VE ++DG R +V E Sbjct: 25 ATNVSERLEEIAEELMVELDRAKVVPAKRLPQNVIHMGSTVEFRSNDGQERRVTLVYPGE 84 Query: 111 IFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEA-SWYVNAIE 154 + ISI +P+ AL+ G G+ V ++ Sbjct: 85 ADIAQGKISILTPIGTALIGLAPGQSISWTARDGKQHELNVLSVS 129 >UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RDE4_PHEZH Length = 161 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 56/154 (36%), Gaps = 22/154 (14%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 VT G + +++ L L + A + + Y ++ Sbjct: 27 NYVTSRGLKLIERALADLDQR-----IAGCEDEAQMAWLRRDQRYWAARR---------- 71 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 N ++V+ SP +V FG V D G +VG DE + +S +P Sbjct: 72 ------ANAQVVE-SPADPDEVAFGTRVTFRKDGGAPETVELVGEDEAEPAQGRLSWVAP 124 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 +ARA++ G+ + T + A+E ++ Sbjct: 125 LARAMIGAMPGETVELETRTPAIRLEILAVEPIR 158 >UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deinococci RepID=Q1IZY0_DEIGD Length = 162 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 7/155 (4%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYL 65 +TREG+E+L++ L + E T+ + +E+ + K+ I+ R+ L Sbjct: 10 LTREGFERLQRTLAQ-EQARLAEATRILQEQMETSADNEDTGLEDAKREKLNIEARIEEL 68 Query: 66 TKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGV-THRFRIVGYDEIFGRKD---YISID 121 L +++ G+V GA V + N+ T R ++V E IS + Sbjct: 69 EDTLARATLIEDHE-NAGRVELGAVVTLNNETTKQTMRVQVVSAPEATVLGGSLPRISEE 127 Query: 122 SPMARALLKKEVGDLAVVNTPAGEA-SWYVNAIEY 155 SP+ R L+ ++ + VVN G+ + V IEY Sbjct: 128 SPVGRQLMGRKKDETFVVNLENGKQVKYRVQDIEY 162 >UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Proteobacteria RepID=B8GS58_THISH Length = 137 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 6/117 (5%) Query: 41 DRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGV 99 DR E+ ++ L R L LE +V+ S V + V + +G Sbjct: 15 DRLEHLLDSLPREALANH----RQLLAELERANVVEPSQVPPTLVTMNSRVRFRVEPEGR 70 Query: 100 THRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTP-AGEASWYVNAIEY 155 + +V + G ++ IS+ +P+ ALL VGD TP GE + + I Y Sbjct: 71 EFQRTLVYPSGMDGDEEKISVLAPIGSALLGLSVGDSIAWPTPKGGEMNVRIMEILY 127 >UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQZ8_BDEBA Length = 138 Score = 101 bits (251), Expect = 9e-21, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 2/93 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + L ++ + V + V+ ++ G +V + + +SI +P Sbjct: 36 LEEELSRANVIAQKEIPKNVVTMNSRVQFLDEVSGQESEMTLVYPQDAKLEEGRLSILAP 95 Query: 124 MARALLKKEVGDLAVVNTPAGE-ASWYVNAIEY 155 + ALL VG P G+ V A+ Y Sbjct: 96 VGIALLGLSVGQEINWKLPNGQSKKLKVQAVTY 128 >UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax=Deinococcus deserti VCD115 RepID=C1CW74_DEIDV Length = 162 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 7/157 (4%) Query: 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREI--DRRVR 63 +TREGYE+L+Q L + +T D EN + I + R+ Sbjct: 7 LTREGYERLEQSLEKERQRLEETITSLANTVDDAMDL-ENRSLNAAQIGQERIAIEARIL 65 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKD---YIS 119 L L IV+ G+V G+ V +E+D G + ++V EI + +S Sbjct: 66 ELEDVLARAVIVEEEDLPRGQVAVGSVVMLEDDKHGRQLQVQLVSAVEISAMTEGVTQVS 125 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 DSP+ +AL+ + G+ V AG + V ++ Sbjct: 126 DDSPVGKALMGRREGETFDVELEAGRVQYTVRSVTAP 162 >UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/GreB family n=2 Tax=Aurantimonadaceae RepID=Q1YFK5_MOBAS Length = 158 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 23/153 (15%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 + LVT G + E+ L +R E A +K + I+R Sbjct: 25 EPNLVTPRGLSLIDAEIAAL------------------NERKEAARQADDKIAIANINRD 66 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 +RY +++ G FG+ V IE +DG T +F IVG DE IS Sbjct: 67 LRYWNARRATAELIRPRDT-GGTAQFGSVVSIEREDGRTQQFTIVGIDEADPSAGLISYL 125 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+AR+L+ + VGD+ AG A + AI Sbjct: 126 SPLARSLIGRTVGDIV----RAGTADAEIIAIS 154 >UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms RepID=B9NGJ6_POPTR Length = 145 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 32/93 (34%), Gaps = 2/93 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDG-VTHRFRIVGYDEIFGRKDYISIDSP 123 L LE IV + V + V + + +V D+ +S+ SP Sbjct: 43 LDALLERAAIVSPDAIPKDVVTMNSRVVCALEGEAKPRDWTLVYPDDADLATGRLSVLSP 102 Query: 124 MARALLKKEVGDLAVVNTPAGE-ASWYVNAIEY 155 + +ALL GD P G + I + Sbjct: 103 IGQALLGARSGDTVDYRLPDGRAQRVTIVEIAF 135 >UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=Limnobacter sp. MED105 RepID=A6GQE5_9BURK Length = 122 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 1/90 (1%) Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEI-ENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 L L+N + + V + I E + G T++ + + K YIS+ S Sbjct: 19 ELNAALDNAEFIKPQDIPADVVTMNSLFTIVETESGSTNKLMLCYPSDAEPAKGYISVLS 78 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNA 152 P+ +LL ++ G +A TP GE + V Sbjct: 79 PVGASLLGRKAGTVAQWATPNGEQHFAVVK 108 >UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti RepID=Q930S2_RHIME Length = 140 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 1/93 (1%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 L + LE ++ V G+ V E +DG F +V D++ K IS+ + Sbjct: 39 AELIEKLERPCVLPDDQVPPDVVKIGSIVTCEVEDGPCRTFSLVYPDDVDAEKGRISVLT 98 Query: 123 PMARALLKKEVGDLAVVNTPAGEA-SWYVNAIE 154 P+ ALL G + G+ V +E Sbjct: 99 PVGVALLGLRPGQAVEWFSRDGQRNHLIVVRVE 131 >UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Bradyrhizobiaceae RepID=Q3SU57_NITWN Length = 151 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 51/155 (32%), Gaps = 24/155 (15%) Query: 18 LNYLWREERPEVTKKVTWAASLGDRSENA--DYQYNKKRLREIDRRVRYLTKCLENLKIV 75 L+ L + P + L +E A Y + +L + ++ +I+ Sbjct: 2 LDNLKKTHLPAIAISAHDIDRLRHLAEAAIEKYPATAE----------FLAREIDRAEII 51 Query: 76 DYS----------PQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSPM 124 + V + V +D G R +V ++ ISI SP+ Sbjct: 52 PADGSLLDDTRDQRWKVNLVTMQSEVTFIDDVSGQKRRVTLVYPEDADVDAGKISILSPI 111 Query: 125 ARALLKKEVGDLAVVNTPAGE-ASWYVNAIEYVKP 158 AL+ G TP+G S V A+ P Sbjct: 112 GAALIGLSAGQSIEFQTPSGGWRSLTVIAVWSYWP 146 >UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF63_CELJU Length = 180 Score = 99.9 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 2/92 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + +V + V + V E+ D G ++V + + ISI SP Sbjct: 86 LDIEIGRATLVADAQLPADVVAMDSEVTFEDLDSGEQKTIQLVFPAQANVDQLKISILSP 145 Query: 124 MARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 + AL+ +G P G+ V A++ Sbjct: 146 VGSALIGLRIGSSIDWPVPQGKVRRLKVIAVK 177 >UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betaproteobacteria RepID=B9MBQ3_DIAST Length = 135 Score = 99.5 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L L+ + D V + V + G T+ +V E+ G D +S+ +P Sbjct: 34 LEAELDRADVFDPKDMPPNVVTMNSTVRFTLLETGKTNTLTLVYPKEMDGSGDKVSVFAP 93 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + ALL VGD + +P G+ + V+AI++ Sbjct: 94 VGIALLGLGVGDEFQMPSPTGQVTVRVDAIDF 125 >UniRef50_A1TEF4 GreA/GreB family elongation factor n=5 Tax=Actinomycetales RepID=A1TEF4_MYCVP Length = 159 Score = 99.1 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 53/154 (34%), Gaps = 15/154 (9%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 +T + E L++EL L P T + + D + K+ R+R Sbjct: 7 VWMTPQAREDLEKELADLMAVPNPAGTDETERTDQVVDA-----WLARKE-------RIR 54 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISIDS 122 + + L SP +G G + + +D G T F + + ++ S Sbjct: 55 QIHELLSRADH-STSPADDGIAEPGMVLTVRFDDTGDTETFLLGTRGTADPELEVYTVAS 113 Query: 123 PMARALLKKEVGDLAVVNTPAGE-ASWYVNAIEY 155 P+ ALL G+ P G V A + Sbjct: 114 PLGSALLGAVPGEQRSFRLPNGSIQQVTVLAAKP 147 >UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Proteobacteria RepID=A6VVR5_MARMS Length = 137 Score = 99.1 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 2/93 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSP 123 L + + +IV+ + V + V + +V + G +D +S+ +P Sbjct: 35 LQEEINRAEIVEPRDMPDNIVTMNSTVTFKVLSSEKEFSKTLVYPKDANGAEDTVSVLAP 94 Query: 124 MARALLKKEVGDLAVVNTPAGE-ASWYVNAIEY 155 + ALL + GD P G+ S + ++Y Sbjct: 95 VGSALLGLKEGDQIDWPKPNGDVLSVVIMKVDY 127 >UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteobacteria RepID=Q5P744_AZOSE Length = 158 Score = 98.7 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 2/94 (2%) Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDS 122 L LE +V V + V ++ G ++V +E +S+ + Sbjct: 57 QLRAELERAVVVPPDFLPRHVVTMHSRVRYLDEASGEQREIQVVYPEEADVAAGKVSVFA 116 Query: 123 PMARALLKKEVGDLAVVNTPAG-EASWYVNAIEY 155 P+ ALL V + + P G V + + Sbjct: 117 PVGAALLGLSVDQVIEWDFPRGPRRRLRVEEVLH 150 >UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIL5_9SPHI Length = 129 Score = 97.9 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 1/95 (1%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISID 121 L+ L I+ + + V I+++ G IV ++ IS+ Sbjct: 33 MSLSAELSRAVILSNEEFPSDAIRLNSTVRIQDESTGEIMELIIVLPQHANIKEKKISVL 92 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYV 156 +P+A AL+ GD PAG ++ + + Sbjct: 93 TPIAAALIGFRQGDAVQWKVPAGLKNFRITEVAAP 127 >UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella forsetii KT0803 RepID=A0LZA7_GRAFK Length = 146 Score = 97.9 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 44/98 (44%) Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 + L + L++ +I+ S + + V IE V ++IV ++ RK+ IS Sbjct: 33 ASIYKLNEELKDARILTNSEMPLDVIRLNSLVTIETPYAVERTYQIVTPEKGDIRKNKIS 92 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 + +PM AL GD P GE+ + ++ ++ Sbjct: 93 VLAPMGLALFGYAQGDNITWTFPLGESYIKIKEVKQIE 130 >UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteobacteria RepID=Q7MD62_VIBVY Length = 135 Score = 97.9 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 5/106 (4%) Query: 53 KRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEI 111 +++ + + L L+ ++ + V + V +V D++ Sbjct: 22 EKMANLSPELEKLENELDRANVLAPQQMPDNIVTMNSTVRFTFVGSDKVMEKTLVYPDQV 81 Query: 112 -FGRKDYISIDSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIEY 155 +SI +P+ ALL VG P G E + + + Y Sbjct: 82 RNPDD--VSIFAPVGSALLGLSVGQQLTWPMPGGAERTIEILEVTY 125 >UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GAI2_SORC5 Length = 140 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 38/117 (32%), Gaps = 2/117 (1%) Query: 41 DRSENADYQYN-KKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGV 99 DR A + R + L +E +V + V + VE+ + D Sbjct: 14 DRDRLARLLEALRARPGGDSPNLEALEIEIERADVVKPADIPPNVVTMNSRVELVDLDTE 73 Query: 100 THR-FRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 +V + IS+ +PM ALL D TP+ + I Y Sbjct: 74 ERLCVTVVFPGNADVKSGRISVLAPMGLALLGCREADEVEWPTPSRTRRLRIERIAY 130 >UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZU20_OPITP Length = 143 Score = 97.2 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 1/95 (1%) Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDS 122 L L +VD + + G+ VEIE+ + G + +V ++ +S+ + Sbjct: 31 QLRSELSRGVVVDATALPPTAIRLGSTVEIEDLESGEIETYTLVLPEQANVDARKLSVLA 90 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 P+ A++ G +TP G + + Sbjct: 91 PIGTAVIGCLQGAEVAWSTPGGTRRLRIGRVSPPA 125 >UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1G7_DESAP Length = 154 Score = 97.2 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 65/159 (40%), Gaps = 8/159 (5%) Query: 1 MKTPL-VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREID 59 M + + ++ Y+ +L + ++ + + A + G ++ + +D Sbjct: 1 MASIIELSNHAYKYFTGQLAQMEAQKL-ALFEDFFTAYAPGVPIDDRT-----EVRLFLD 54 Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYI 118 + + + L ++V+ G + +E+ D G + FR+V EI ++ Sbjct: 55 DYLNRVRELLARARVVEGQCPPLPLTLIGCDIRVEDLDRGHSEMFRVVSPYEINPAAGHV 114 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 S SP+ R LL KE G + V P G + V ++ Y Sbjct: 115 SFLSPVGRGLLLKEPGQVLAVQAPGGTFRYRVVSVTYPA 153 >UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 Tax=Pseudomonas fluorescens RepID=Q3K4S3_PSEPF Length = 136 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 3/93 (3%) Query: 65 LTKCLENL-KIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDS 122 L L+ +V + V + V + G + +V + +SI + Sbjct: 33 LQTELDRADTLVGHDEVPADVVTMNSRVHCREESSGKDYHLTLVYPKHANADEGKVSILA 92 Query: 123 PMARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 P+ ALL +VG P G+ + +E Sbjct: 93 PVGSALLGLKVGQHIDWPAPGGKTLKLTLLEVE 125 >UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochrobactrum RepID=A6X2G5_OCHA4 Length = 156 Score = 96.4 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 24/152 (15%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 LVT G ++ E+ L R ++ A G+ + + I R +R Sbjct: 26 NLVTPTGLTMIEDEIARLQR--------ELADANVAGE----------RSAIARISRDLR 67 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDS 122 Y T EN ++ P V FG VE+EN DDG R+ IVG DE IS + Sbjct: 68 YWTTRRENAELSVPVP-DSDVVRFGMTVELENLDDGKVRRWTIVGEDEADPSNGKISHVA 126 Query: 123 PMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 P+A L K VGD+ +N W + +++ Sbjct: 127 PVAILLFGKPVGDVVKIN----NVEWEIVSLK 154 >UniRef50_C7MX98 Transcription elongation factor n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MX98_SACVD Length = 154 Score = 96.4 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 8/158 (5%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 TP ++ +L++EL L ++ R E+ ++ LGD ++ AD + + +DRR Sbjct: 3 STPGLSPATRSRLERELEQLRKQ-RAELLPRLGE-DPLGDSADQADLVERSEVVSRLDRR 60 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVG-YDEIFGRK-DYIS 119 + + L S + EG + G V + DDG +VG E ++ Sbjct: 61 INEVVDLLH----GQISTESEGGLPSGTKVTLRFDDGSVEDMVVVGVAAEADEDDTSTLT 116 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 DSP+ +AL + GD TP GE + + + + Sbjct: 117 ADSPLGQALAGHQEGDTVTYRTPKGEVTAEIVKLTPPR 154 >UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6Y2_VIBME Length = 136 Score = 96.4 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 3/103 (2%) Query: 53 KRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEI 111 +L ++ + + L L+ +++ V + V+ + + +V ++ Sbjct: 23 DKLPKLSKELERLENELDRATVLNPEEIPADVVTMNSTVKFKFQGSDDVMQKTLVYPHDV 82 Query: 112 FGRKDYISIDSPMARALLKKEVGDLAVVNTPAG-EASWYVNAI 153 G D ISI +P+ ALL G P G E + + I Sbjct: 83 KGNDD-ISIFAPVGSALLGLSKGQQLTWPMPNGVERTIEIIDI 124 >UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Bacteria RepID=Q4KB20_PSEF5 Length = 379 Score = 95.6 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 28/94 (29%), Gaps = 1/94 (1%) Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISID 121 + L LE +V + + ++ D +V ++ S+ Sbjct: 277 IVELEHELERAIVVKPQQVARNVITMNSRALLQ-LDDEEIEVALVYPEDADSTAGKHSVY 335 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 S + A+L + GD + + Y Sbjct: 336 SDIGAAILGYQEGDTIDWRISDRTRRIEIRKVLY 369 >UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae RepID=C6WYK0_METML Length = 125 Score = 95.6 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 2/92 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSP 123 L L +V V + V ++ G++ +V + + IS+ SP Sbjct: 26 LGDELSRAIVVPADQVPADVVRINSRVIYLDESSGLSREVELVFPEGADLKFGKISVLSP 85 Query: 124 MARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 + ALL + G + P G+ V ++ Sbjct: 86 VGSALLGLKEGQVIDWPFPHGQSRRLKVVSVA 117 >UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain protein n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XWY5_PEDHD Length = 125 Score = 95.2 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 1/92 (1%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISID 121 L L+ I V + I N G F++V +E + +S+ Sbjct: 31 EKLQAELKAATIYTEEELPSDVVCLKSEARIANVKTGKEFTFKLVMPEEANIKAQKVSVF 90 Query: 122 SPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 +P+ AL GD P G + + + Sbjct: 91 APIGIALFGYRTGDSINWEMPDGIQEFKILEV 122 >UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alphaproteobacteria RepID=B0T2S8_CAUSK Length = 161 Score = 95.2 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 19/150 (12%) Query: 4 PLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVR 63 LVT G +++ EL + A + GD +++ + + R +R Sbjct: 28 NLVTPGGLVRIEDELA--------AARAAYSAAQAGGDVAQD------RTAMARATRDLR 73 Query: 64 YLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSP 123 Y + + ++ + P + FG V + +DG FRIVG DE + +S SP Sbjct: 74 YWSARRASAQLRELDPA-LDVLQFGGSVTFDREDGRRQTFRIVGEDEADPTQGSVSYVSP 132 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAI 153 +ARALL K VGD A+V GE + AI Sbjct: 133 VARALLGKAVGDTAIVA--GGE--VEIIAI 158 >UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroidetes RepID=A6EMP4_9BACT Length = 139 Score = 94.9 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 40/101 (39%) Query: 57 EIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKD 116 EI + + L + L+ IVD + F + V I +G F+IV + D Sbjct: 30 EIQKSFKRLNEELKTAIIVDEEEMPTDVIRFNSQVLISTKNGWKKEFQIVSPALKDVKAD 89 Query: 117 YISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157 ISI + M AL GD P G+ + + V+ Sbjct: 90 KISILTVMGAALFGYAQGDTVEWEFPTGKNLITIEKVAQVE 130 >UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6F4_9BACT Length = 148 Score = 94.9 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 48/140 (34%), Gaps = 18/140 (12%) Query: 15 KQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKI 74 +Q+ Y+ R + ++ ++ A EN + L + I Sbjct: 3 EQQPIYISRADLLQIRARLNLIAEGRHDREN----------------LARLRAEFDRALI 46 Query: 75 V-DYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKE 132 + D + +G V V +++ D + + + ISI +P+ ALL + Sbjct: 47 IEDDTAMPDGVVTLHCEVRLQDLDTNEIETYTLTLPEHADPEAHRISILAPIGTALLGYQ 106 Query: 133 VGDLAVVNTPAGEASWYVNA 152 V ++ P G + Sbjct: 107 VDNVVTWEMPGGARRLRILE 126 >UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C278_9PLAN Length = 137 Score = 94.9 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 1/92 (1%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L L IV+ V + V + + + + +V + ++ +SI +P Sbjct: 37 LHAELAVAHIVESEEIPADIVTMNSTVRLRDLETDELETYTLVYPQDANIKEGKLSILTP 96 Query: 124 MARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 + A+L +GD AG + V I + Sbjct: 97 IGTAILGYRIGDQLRSRALAGGSKIRVEEILF 128 >UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=Mesorhizobium RepID=Q98F06_RHILO Length = 140 Score = 94.9 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 1/92 (1%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 L ++ + D + V G+ V + + G T R +V E ++ IS+ + Sbjct: 39 EELLFEMDRAVVTDAAAMPADVVRMGSAVTVRGEGGATQRIMLVYPGEADIAENRISVLT 98 Query: 123 PMARALLKKEVGDLAVVNTPAG-EASWYVNAI 153 PM AL+ +G ++ G E S V A+ Sbjct: 99 PMGTALIGASIGQAVCWSSRGGRELSVTVEAV 130 >UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acinetobacter RepID=C6RP41_ACIRA Length = 134 Score = 94.5 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 35/105 (33%), Gaps = 2/105 (1%) Query: 53 KRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEI 111 + + + + +L L ++V+ V V I ++V + Sbjct: 21 EHQSHMTQTIEHLEDELARAEVVEPHEIPANVVSMNTRVLITIAPSTEPTEIQLVYPHDF 80 Query: 112 FGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEA-SWYVNAIEY 155 G K +++ +P+ A+L G P G + + Y Sbjct: 81 RGDKGQVNVLAPIGAAILGLAEGQEIEWPQPDGHLMKVKIEKVLY 125 >UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74EX3_GEOSL Length = 135 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 1/97 (1%) Query: 60 RRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYI 118 + ++ L L + IVD V + V++ + +V ++ + I Sbjct: 29 KDLQKLEDELASAMIVDPKDVPPNVVTMNSRVKLRDLRADKEMTISLVFPNDANIAEGKI 88 Query: 119 SIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEY 155 SI SP+ A+L GD + + + + Y Sbjct: 89 SILSPIGTAILGFGAGDTLDLAVRSFAKKIRIEEVLY 125 >UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FHU8_FLAJ1 Length = 132 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 1/103 (0%) Query: 52 KKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDE 110 K + + L++ L+ I S + + V IE+ + +IV Sbjct: 21 KSKNSTNTKEANQLSQELDRAVISKESELDSSVIRINSLVTIEDVKANKQMKIQIVLPSY 80 Query: 111 IFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAI 153 ++ ISI +P++ A++ + D PAG + + A+ Sbjct: 81 ADVKQSKISILAPLSVAIIGFKENDEVDWELPAGIKTLKIVAV 123 >UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VGM9_SPHWW Length = 137 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 10/135 (7%) Query: 22 WREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQ 81 RP + + A L D + RL ++ + L + L I Sbjct: 5 KAARRPPIHMIDSEADILADLA-----TSAATRLPQVS---QLLLEELGRATIHKADRIP 56 Query: 82 EGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVN 140 V + V+ + G HR+++V + + ISI +P+ L+ G + Sbjct: 57 GDIVTMHSVVQFTDAASGKEHRYQLVYPKDADIAEGRISILTPVGAGLIGLRAGQSILWP 116 Query: 141 TPAG-EASWYVNAIE 154 G E + + Sbjct: 117 DRDGHERLLTIAKVS 131 >UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155 Tax=Enterobacteriaceae RepID=RNK_ECO57 Length = 136 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 2/93 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSP 123 L L+ ++ V + V+ N DG +V ++ +S+ +P Sbjct: 34 LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93 Query: 124 MARALLKKEVGDLAVVNTPAGEAS-WYVNAIEY 155 + ALL VGD P G A+ V +EY Sbjct: 94 VGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126 >UniRef50_A4T6M8 GreA/GreB family elongation factor n=3 Tax=Mycobacterium RepID=A4T6M8_MYCGI Length = 157 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 21/156 (13%) Query: 2 KTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRR 61 T ++ + E L+QEL L P + +V A + K+ R Sbjct: 5 DTIWMSPQTRESLEQELAALMAAPGPAGSDEVVDA-----------WLARKE-------R 46 Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISI 120 +R + + L + P +G G + + DD G T F + + D S+ Sbjct: 47 IRQIHELLTKAEH-AVDPADDGVAEPGMVLTVRFDDAGDTETFLLGTRATVDSELDVYSV 105 Query: 121 DSPMARALLKKEVGDLAVVNTPA-GEASWYVNAIEY 155 +SPM ALL G P G + + + Sbjct: 106 NSPMGSALLGATPGQQRSYQLPNGGTQQVTLLSAKP 141 >UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bacteria RepID=A4XNX9_PSEMY Length = 135 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 3/95 (3%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISID 121 L L+ ++V G V + V + G + +V + G +SI Sbjct: 32 AALQAELDRAEVVGLDEVPAGLVTMNSRVHCREESSGKDYHLTLVYPQDAGGE-GTVSIL 90 Query: 122 SPMARALLKKEVGDLAVVNTPAGEA-SWYVNAIEY 155 +P+ ALL VG P G+ + A+EY Sbjct: 91 APVGSALLGLSVGQHIDWPAPGGKQLKLTLLAVEY 125 >UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methylobacterium RepID=B8IFL5_METNO Length = 141 Score = 92.6 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 2/92 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSP 123 L L+ +IV + V G VE +D G +V E + IS+ +P Sbjct: 45 LADELDRAQIVAGRGRLPPFVRMGCQVEFRDDTTGRVQIVTLVYPGEANIEQGKISVLTP 104 Query: 124 MARALLKKEVGDLAVVNTPAG-EASWYVNAIE 154 + AL+ G T +G S V + Sbjct: 105 IGAALIGLSTGQSITWETRSGLTKSLTVLDVR 136 >UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizobiales RepID=A7IJH2_XANP2 Length = 143 Score = 91.4 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 2/96 (2%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDS 122 L L+ ++V V G+ V E G +V ++ +S+ + Sbjct: 44 EELLAELDRARLVPIGRVPATAVQMGSKVTYE-AGGNARTVTLVYPEDADIAAARVSVMT 102 Query: 123 PMARALLKKEVGDLAVVNTPAGEA-SWYVNAIEYVK 157 P+ AL+ G G V ++ + Sbjct: 103 PIGAALIGLSKGQSICWTARDGRRHELKVIEVQPPE 138 >UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular organisms RepID=B4RF21_PHEZH Length = 214 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 2/92 (2%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSP 123 L + L+ +V + V G+ VE + +V D + +S+ SP Sbjct: 121 LARELDRAIVVREGEKSRPFVRLGSTVEYRDRLTEKVRTVELVPPDAADIDANRLSVLSP 180 Query: 124 MARALLKKEVGDLAVVNTPAGE-ASWYVNAIE 154 + ALL VGD P G V A+ Sbjct: 181 VGAALLGLSVGDTFSWTAPDGRPRVVTVEAVR 212 >UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalobacter formigenes RepID=C3X2V3_OXAFO Length = 140 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 11/135 (8%) Query: 25 ERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGK 84 ERP +T L NA Y + L + L+ +V+ E Sbjct: 13 ERPPITVTTHDYERLEQMLRNAKY--------RNIPGMADLQRELDRANVVEPEELPEDV 64 Query: 85 VFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPA 143 + + +D + +V D+ G IS+ +P+ ALL G P Sbjct: 65 ITINSTARFIDDCTNDQYEITLVYPDKADG-VSKISVLAPVGSALLGLSAGQSIPWQVPG 123 Query: 144 G-EASWYVNAIEYVK 157 + V ++ K Sbjct: 124 RQKLQLRVLDVKAPK 138 >UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Z69_PSEA6 Length = 128 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 1/112 (0%) Query: 44 ENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHR 102 + A+ +Y +R + D +R + L+ IV E V G+ V + D Sbjct: 13 DLAELEYQLERSKLPDDAIRAIENELDRATIVACKDLPENVVAIGSQVTFKILDSQKVFT 72 Query: 103 FRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 + + +D IS+ +P+ AL+ G T G+ S + +E Sbjct: 73 KALCLPHDSVKFEDSISVFAPIGSALIGLSTGQCIKWQTQRGQQSVEIIKVE 124 >UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7L307_METC4 Length = 147 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 2/98 (2%) Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISI 120 V +L + L+ +V V A VE +D + E IS+ Sbjct: 40 VAWLAEELDRATVVPPGAVPPRVVTMHARVEYRDDVTDQVRCVTLTYPGEEDAYASGISV 99 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEAS-WYVNAIEYVK 157 +P+ AL+ G TP+G V + + Sbjct: 100 LTPVGAALVGLSEGHSIRWRTPSGGLRGLTVLRVRFAP 137 >UniRef50_Q5QX12 Transcription elongation factor family protein n=1 Tax=Idiomarina loihiensis RepID=Q5QX12_IDILO Length = 129 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 1/94 (1%) Query: 62 VRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIE-NDDGVTHRFRIVGYDEIFGRKDYISI 120 + L L KIV+ + V + + G + D++ D +S+ Sbjct: 35 LDELEVELARAKIVEPNVMPANVACLNRQVTFKVLETGKVFTKTLTAPDQVDKYDDSLSV 94 Query: 121 DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +P+ AL+ VG T G S + + Sbjct: 95 FAPLGAALIGLSVGQSIQWKTNRGLQSVEIVHVA 128 >UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EFF1_9RHOB Length = 146 Score = 90.6 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 3/91 (3%) Query: 67 KCLENLKIVDYSPQQEGKVFFGAWVEIENDD-GVTHRFRIVGYDEIFGRKDYISIDSPMA 125 + + +IV+ V G+ V ++ G +V ++ + +S+ +P+ Sbjct: 48 EEIGRAQIVEDQQMPGDVVGIGSKVTYRDETTGQNKSVTLVYPEDADITRSQVSVITPIG 107 Query: 126 RALLKKEVGDLAVVNTPAGEAS--WYVNAIE 154 ALL G +T + +E Sbjct: 108 VALLGLREGASFYWDTRRENQRHMLTILKVE 138 >UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D4X0_PELTS Length = 150 Score = 89.9 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 12/155 (7%) Query: 1 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60 M +++ +E L + L + + + K + + EN I+ Sbjct: 1 MVKVALSKTAFEYLVKHLVEIEEGKNKILEKFFPKPSKERNEFEN-----------LIEN 49 Query: 61 RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTH-RFRIVGYDEIFGRKDYIS 119 ++ L + + N + + V G+ VEI+N ++ IV R+ +IS Sbjct: 50 YIQRLDRLIRNASKSKIADNKVPFVTIGSEVEIQNLSEQEVYKYFIVNPFYSEVREGHIS 109 Query: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 SP+ ++LL K+VGD V P G + + +I Sbjct: 110 FLSPVGKSLLLKKVGDEVEVKAPGGVFRYKIKSIR 144 >UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2GA51_NOVAD Length = 159 Score = 89.9 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 2/93 (2%) Query: 63 RYLTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISID 121 R L + + +IV V + V ++ G +V E +D +SI Sbjct: 59 RMLMEEIGRAQIVPAQDLPPDAVAMRSVVRFRDEATGAVRTVTLVYPAEADIAQDRVSIL 118 Query: 122 SPMARALLKKEVGDLAVVNTPAGEAS-WYVNAI 153 +P+ L+ G G+ + + Sbjct: 119 TPVGAGLIGLRAGQSIDWPNVRGKQRAITIEQV 151 >UniRef50_B2SQJ5 Regulator of nucleoside diphosphate kinase n=8 Tax=Xanthomonadaceae RepID=B2SQJ5_XANOP Length = 215 Score = 89.1 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 1/82 (1%) Query: 65 LTKCLENLKIVDYSPQQEGKVFFGAWVEIEND-DGVTHRFRIVGYDEIFGRKDYISIDSP 123 L+ L +++ + V + +E E+ G H V E + I + +P Sbjct: 113 LSDELGRARVLPPDQIRGDVVTMHSRIECEDQLHGGRHTLPPVHPHEADVQHGRICVLAP 172 Query: 124 MARALLKKEVGDLAVVNTPAGE 145 + AL VG TP G Sbjct: 173 VGSALGGLSVGQRIDWRTPDGR 194 >UniRef50_P65095 Uncharacterized protein Rv3788/MT3896 n=17 Tax=Mycobacterium RepID=Y3788_MYCTU Length = 161 Score = 89.1 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 51/150 (34%), Gaps = 8/150 (5%) Query: 9 EGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKC 68 + L EL L + + +GD + A+ L + R+ L + Sbjct: 13 AARDHLAAELARLRQRRDRLEVEVKNDRGMIGDHGDAAEAIQRADELAILGDRINELDRR 72 Query: 69 LENLKIVDYSPQQEGKVFFG-AWVEIENDDGVTHRFRIVGYDEIFG---RKDYISIDSPM 124 L +P + G V + DG ++ E + ++ SP+ Sbjct: 73 LRT----GPTPWSGSETLPGGTEVTLRFPDGEVVTMHVISVVEETPVGREAETLTARSPL 128 Query: 125 ARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 +AL + GD +TP G + A++ Sbjct: 129 GQALAGHQPGDTVTYSTPQGPNQVQLLAVK 158 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.161 0.459 Lambda K H 0.267 0.0495 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,228,278,293 Number of Sequences: 3077464 Number of extensions: 61146991 Number of successful extensions: 297759 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 829 Number of HSP's successfully gapped in prelim test: 206 Number of HSP's that attempted gapping in prelim test: 295568 Number of HSP's gapped (non-prelim): 1498 length of query: 158 length of database: 1,040,396,356 effective HSP length: 118 effective length of query: 40 effective length of database: 677,255,604 effective search space: 27090224160 effective search space used: 27090224160 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 88 (38.2 bits)