101 c3njrB_ Probab=99.69   E-value=1.8e-16  Score=117.26  Aligned_columns=148  Identities=21%

Q ss_pred             HCCCHHHCCCCHHHHHHH-HHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             534834277748999999-9967788788899977898589999984047752888639889678764201111123210
Q batch____        11 ESEHRIHNPFTEEKYATL-GRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVH   89 (248)
Q Consensus        11 ~~~~~~~~~~~~~~~~~l-~~~~~l~pg~rVLDiGcG~G~~~~~la~~~~~~v~g~d~~~~~~~~~~~~~~~~~~~~~~~   89 (248)
                      .+.+..-.+++.+.++.+ +..++++||++|||||||+|.++..++.. +..++++|+++.+++.++++....+..+++.
T Consensus         9 ~~~f~~~~~~t~~e~r~~~l~~l~~~~g~~VLDiG~G~G~~~~~~a~~-~~~v~avd~~~~~~~~ar~n~~~~gl~~~v~   87 (184)
T c3njrB_           9 ESAFAHDGQITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMR   87 (184)
T ss_dssp             GGGSCCSSCCCCHHHHHHHHHHHCCCTTCEEEEESCTTCHHHHHHHHT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEE
T ss_pred             HHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCC-CCCCHHHCCHHHHHHHHHHHHHHCCCCCCCE
T ss_conf             455302888786899999999709996889999467846766431023-3332011006999999999999828987854


Q ss_pred             CHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCHHH
Q ss_conf             00002311122321249998877984127899999865423797189997372378889988998500136776689899
Q batch____        90 FIHNDAAGYVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPG  169 (248)
Q Consensus        90 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (248)
                      +..++..+...+-..+..    ++.+..++..+++++.++|||||++++......                     +...
T Consensus        88 ~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~e---------------------~~~~  142 (184)
T c3njrB_          88 AVQGTAPAALADLPLPEA----VFIGGGGSQALYDRLWEWLAPGTRIVANAVTLE---------------------SETL  142 (184)
T ss_dssp             EEESCTTGGGTTSCCCSE----EEESSCCCHHHHHHHHHHSCTTCEEEEEECSHH---------------------HHHH
T ss_pred             EEECCHHHCCCCCCCHHH----HHHCCCCCHHCHHHHHHHCCCCCEEEEECCCHH---------------------HHHH
T ss_conf             895502220002898221----121022501058989873289868999647801---------------------5999


Q ss_pred             HHHHHHHCCCEEEEE
Q ss_conf             999999769817999
Q batch____       170 LVGAFDDLGYDVVEM  184 (248)
Q Consensus       170 ~~~~l~~aG~~~~~~  184 (248)
                      ..+.+++.||+++.+
T Consensus       143 ~~~~l~~~g~~~~~~  157 (184)
T c3njrB_         143 LTQLHARHGGQLLRI  157 (184)
T ss_dssp             HHHHHHHHCCEEEEE
T ss_pred             HHHHHHHCCCEEEEE
T ss_conf             999998649949999