61 d1jsca3 Probab=99.43   E-value=2.3e-11  Score=89.02  Aligned_columns=165  Identities=17%

Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             64302579999999998724686777777887799837621089999999818888978987421048988877986658
Q batch____        27 PGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYT  106 (663)
Q Consensus        27 ~g~~l~~~el~~aL~~~~~~~~~~~p~~~~rDr~v~~~GH~~~~~Ya~~~l~G~~~~~~~l~~~r~~~~~~~g~p~~~~~  106 (663)
                      ++..+.--.++.+|-..+       +.......++.|.|...   +.........                     +..+
T Consensus         7 ~~~~i~p~~~~~~l~~~~-------~~~~~~~i~v~d~G~~~---~~~~~~~~~~---------------------~~~~   55 (172)
T d1jsca3           7 PGSKIKPQTVIKKLSKVA-------NDTGRHVIVTTGVGQHQ---MWAAQHWTWR---------------------NPHT   55 (172)
T ss_dssp             SSSCCCHHHHHHHHHHHH-------HHTCSCEEEEECSSHHH---HHHHHHSCCC---------------------STTC
T ss_pred             CCCCCCHHHHHHHHHHHC-------CCCCCCEEEEECCCCHH---HHHHHHCCCC---------------------CCCE
T ss_conf             998759999999999873-------22599779995788014---6686403136---------------------9988


Q ss_pred             CCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf             87532887205689999999999998532125565567896599997042257858899999999749996899996798
Q batch____       107 AGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNG  186 (663)
Q Consensus       107 p~~~~~tG~lG~gls~A~G~A~a~~~~~~~~~~~~~~~~~~~v~~viGDG~l~eG~~~EAln~A~~~~l~~li~I~ddN~  186 (663)
                      -......|.+|.+++.|+|.+++..              +++|+|++|||++  .+..+.+..|..++++.+++|+|||+
T Consensus        56 ~~~~~~~~~mG~~~~~a~Ga~la~p--------------~~~Vv~i~GDGsf--~~~~~~l~~a~~~~~~i~~vv~nN~~  119 (172)
T d1jsca3          56 FITSGGLGTMGYGLPAAIGAQVAKP--------------ESLVIDIDGDASF--NMTLTELSSAVQAGTPVKILILNNEE  119 (172)
T ss_dssp             EECCCSSCCTTCHHHHHHHHHHHCT--------------TSEEEEEEEHHHH--HHHGGGHHHHHHHTCCCEEEEEECCC
T ss_pred             EEECCCHHHHCHHHHHHHHHHHHCC--------------CCEEEEEECCCCC--CCCHHHHHHHHHCCCCEEEEEEECCC
T ss_conf             9930302121107999999997379--------------9769999618522--40879999999729985999995777


Q ss_pred             CCCCCCHHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf             6327775560101489998740892589617999999999999998306997699983435
Q batch____       187 ISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLMCKTII  247 (663)
Q Consensus       187 ~sis~~~~~~~~~~~~~~~~a~g~~~~~~~dG~D~~~i~~a~~~a~~~~~~P~~I~~~T~k  247 (663)
                      +.....     ..+.....+++|.....+   ++..++.++++++.+ .++|++|++.+-+
T Consensus       120 ~~~~~~-----~~~~~~~a~a~g~~~~~v---~~~~el~~al~~a~~-~~gp~lIev~vd~  171 (172)
T d1jsca3         120 SHTHQL-----NPDFIKLAEAMGLKGLRV---KKQEELDAKLKEFVS-TKGPVLLEVEVDK  171 (172)
T ss_dssp             CCCCCC-----CCCHHHHHHHHTSEEEEE---CSHHHHHHHHHHHHH-CSSCEEEEEECCC
T ss_pred             CCCCCC-----CCCHHHHHHHCCEEEEEE---CCHHHHHHHHHHHHH-CCCCEEEEEECCC
T ss_conf             742332-----256888850023239998---898999999999996-6998899998289