BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (968 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B7VIC2 RNA polymerase-associated protein rapA n=29 Tax=... 1288 0.0 UniRef50_A7MSB2 RNA polymerase-associated protein rapA n=212 Tax... 1283 0.0 UniRef50_A1RFP5 RNA polymerase-associated protein rapA n=21 Tax=... 1179 0.0 UniRef50_A3MZ32 RNA polymerase-associated protein rapA n=32 Tax=... 1142 0.0 UniRef50_A5UAT0 RNA polymerase-associated protein rapA n=16 Tax=... 1037 0.0 UniRef50_C6AQR6 RNA polymerase-associated protein RapA (ATP-depe... 1026 0.0 UniRef50_B7V6T4 RNA polymerase-associated protein rapA n=24 Tax=... 961 0.0 UniRef50_B4RZE3 RNA polymerase-associated protein HepA n=3 Tax=A... 875 0.0 UniRef50_C6MG44 SNF2-related protein n=1 Tax=Nitrosomonas sp. AL... 853 0.0 UniRef50_B3PHI1 RNA polymerase-associated protein HepA n=2 Tax=G... 842 0.0 UniRef50_B7RWY5 Type III restriction enzyme, res subunit family ... 839 0.0 UniRef50_Q2SC88 Superfamily II DNA/RNA helicase, SNF2 family n=2... 832 0.0 UniRef50_Q5ZT66 ATP-dependent RNA helicase n=9 Tax=Gammaproteoba... 820 0.0 UniRef50_C5SAQ5 Helicase domain protein n=1 Tax=Allochromatium v... 804 0.0 UniRef50_A4A3Z1 RNA polymerase associated protein rapA n=1 Tax=C... 771 0.0 UniRef50_C0N229 Type III restriction enzyme, res subunit family ... 766 0.0 UniRef50_Q1R0C7 Helicase-like protein n=4 Tax=Gammaproteobacteri... 762 0.0 UniRef50_Q0VNA6 RNA polymerase-associated protein HepA n=2 Tax=A... 728 0.0 UniRef50_B5JYH0 RNA polymerase-associated protein HepA n=1 Tax=g... 723 0.0 UniRef50_A0Z260 ATP-dependent helicase HepA n=1 Tax=marine gamma... 722 0.0 UniRef50_Q5QVN2 Probable ATP-dependent RNA helicase HepA n=2 Tax... 715 0.0 UniRef50_B9XDU2 SNF2-related protein n=1 Tax=bacterium Ellin514 ... 712 0.0 UniRef50_UPI0000E0E48B ATP-dependent helicase HepA n=1 Tax=Glaci... 706 0.0 UniRef50_B5JQV3 Type III restriction enzyme, res subunit family ... 679 0.0 UniRef50_B4DAH6 Helicase domain protein n=2 Tax=Verrucomicrobia ... 674 0.0 UniRef50_Q1Q8E0 Helicase-like n=22 Tax=Gammaproteobacteria RepID... 671 0.0 UniRef50_B1ZQP7 Helicase domain protein n=4 Tax=Bacteria RepID=B... 659 0.0 UniRef50_A6DT84 ATP-dependent helicase HepA n=1 Tax=Lentisphaera... 649 0.0 UniRef50_A6VZC5 Helicase domain protein n=2 Tax=Marinomonas RepI... 632 e-179 UniRef50_C0QC91 RapA n=1 Tax=Desulfobacterium autotrophicum HRM2... 614 e-174 UniRef50_Q21K39 Helicase-like protein n=1 Tax=Saccharophagus deg... 545 e-153 UniRef50_C5BJV2 RNA polymerase-associated protein RapA n=1 Tax=T... 541 e-152 UniRef50_Q1MY01 ATP-dependent helicase HepA n=1 Tax=Bermanella m... 528 e-148 UniRef50_UPI0001698444 ATP-dependent helicase HepA n=1 Tax=Endor... 501 e-140 UniRef50_A4BDR8 Superfamily II DNA/RNA helicase, SNF2 family pro... 498 e-139 UniRef50_C9RJU1 Helicase domain protein n=1 Tax=Fibrobacter succ... 489 e-136 UniRef50_D2YSY0 RNA polymerase-associated protein rapA n=1 Tax=V... 301 1e-79 UniRef50_Q08VX8 Type III restriction enzyme, res subunit family ... 259 3e-67 UniRef50_UPI0001698443 ATP-dependent helicase HepA n=1 Tax=Endor... 219 3e-55 UniRef50_A4IQV6 Helicase, Snf2/Rad54 family n=11 Tax=Bacillaceae... 155 5e-36 UniRef50_B9LVT7 Helicase domain protein n=2 Tax=Halobacteriaceae... 150 3e-34 UniRef50_A7HSB4 Helicase domain protein n=6 Tax=Bacteria RepID=A... 145 6e-33 UniRef50_A7H7X7 Type III restriction protein res subunit n=4 Tax... 142 8e-32 UniRef50_B0TFG6 Helicase (Snf2 family) protein n=1 Tax=Heliobact... 140 3e-31 UniRef50_A9B2A6 Helicase domain protein n=1 Tax=Herpetosiphon au... 140 3e-31 UniRef50_C7HAN1 ATP-dependent helicase n=1 Tax=Faecalibacterium ... 134 2e-29 UniRef50_B9LWH1 Helicase domain protein n=3 Tax=Halobacteriaceae... 130 3e-28 UniRef50_UPI0001AF4744 SNF2 family helicase n=1 Tax=Mycobacteriu... 130 4e-28 UniRef50_A1UB35 Helicase domain protein n=5 Tax=Actinomycetales ... 129 6e-28 UniRef50_D2SCJ3 Helicase domain protein n=3 Tax=Actinomycetales ... 126 4e-27 UniRef50_B8CWH2 Helicase domain protein n=1 Tax=Halothermothrix ... 124 2e-26 UniRef50_A3NZZ0 SNF2-related:Helicase, C-terminal n=4 Tax=Burkho... 122 8e-26 UniRef50_D0LMZ8 Helicase domain protein n=1 Tax=Haliangium ochra... 121 1e-25 UniRef50_Q04VV1 DNA/RNA helicase Superfamily II n=6 Tax=Leptospi... 120 3e-25 UniRef50_Q10WY7 Helicase-like n=2 Tax=Cyanobacteria RepID=Q10WY7... 120 3e-25 UniRef50_C9ZFV2 Putative helicase SNF2 family protein n=1 Tax=St... 118 1e-24 UniRef50_C1TPU8 DNA/RNA helicase, superfamily II, SNF2 family n=... 116 3e-24 UniRef50_A0LQ13 Helicase domain protein n=5 Tax=Bacteria RepID=A... 116 4e-24 UniRef50_A6L6P1 Putative ATP-dependent helicase n=1 Tax=Bacteroi... 116 4e-24 UniRef50_B0TB39 Snf2 family helicase, putative n=2 Tax=Clostridi... 115 6e-24 UniRef50_A6DRD5 Putative ATP-dependent helicase n=1 Tax=Lentisph... 115 7e-24 UniRef50_A8L3E6 Helicase domain protein n=2 Tax=Actinomycetales ... 115 9e-24 UniRef50_O30320 ATP-dependent RNA helicase HepA, putative n=1 Ta... 114 2e-23 UniRef50_UPI0001C38076 helicase-like protein n=1 Tax=Arthrospira... 113 3e-23 UniRef50_D0LCG3 Helicase domain protein n=2 Tax=Actinomycetales ... 112 5e-23 UniRef50_A3T2F3 Putative uncharacterized protein n=1 Tax=Sulfito... 112 6e-23 UniRef50_B0K8X0 Helicase domain protein n=6 Tax=Clostridia RepID... 112 8e-23 UniRef50_P54509 Uncharacterized ATP-dependent helicase yqhH n=93... 112 1e-22 UniRef50_B1LDN7 Helicase family protein n=20 Tax=Bacteria RepID=... 111 1e-22 UniRef50_Q3M125 Type III restriction enzyme, res subunit n=1 Tax... 111 1e-22 UniRef50_D1C8V0 Helicase domain protein n=1 Tax=Sphaerobacter th... 111 1e-22 UniRef50_C7HF43 Helicase domain protein n=1 Tax=Clostridium ther... 111 2e-22 UniRef50_UPI000185C06D superfamily II DNA/RNA helicase, SNF2 fam... 110 2e-22 UniRef50_B4SD80 Helicase domain protein n=7 Tax=Bacteria RepID=B... 110 2e-22 UniRef50_B8G776 Helicase domain protein n=1 Tax=Chloroflexus agg... 110 3e-22 UniRef50_A6FSF7 Helicase/SNF2 family domain protein n=1 Tax=Rose... 109 5e-22 UniRef50_Q5P8U4 Helicase/SNF2 family domain protein n=1 Tax=Arom... 109 7e-22 UniRef50_D2QAP2 ATP-dependent DNA helicase recQ n=3 Tax=Bacteria... 108 8e-22 UniRef50_C7RVR4 Putative uncharacterized protein n=1 Tax=Candida... 108 1e-21 UniRef50_C0GU74 Helicase domain protein n=1 Tax=Desulfonatronosp... 108 1e-21 UniRef50_A6T1M7 ATP-dependent RNA helicase n=7 Tax=Bacteria RepI... 107 2e-21 UniRef50_A4J1V5 Helicase domain protein n=1 Tax=Desulfotomaculum... 106 5e-21 UniRef50_A4VQ25 Superfamily II DNA/RNA helicase, SNF2 family n=1... 105 7e-21 UniRef50_B1XR31 DEAD/H helicase n=2 Tax=Cyanobacteria RepID=B1XR... 105 8e-21 UniRef50_Q3JN30 Helicase (Snf2 family) n=20 Tax=Bacteria RepID=Q... 105 8e-21 UniRef50_B1I2C6 Helicase domain protein n=1 Tax=Candidatus Desul... 105 9e-21 UniRef50_A7NJN1 Helicase domain protein n=3 Tax=cellular organis... 105 1e-20 UniRef50_A6NWV9 Putative uncharacterized protein n=1 Tax=Bactero... 104 1e-20 UniRef50_C1XVJ8 DNA/RNA helicase, superfamily II, SNF2 family n=... 104 2e-20 UniRef50_Q7NGZ6 Gll2741 protein n=2 Tax=Cyanobacteria RepID=Q7NG... 103 2e-20 UniRef50_C8WXJ2 SNF2-related protein n=2 Tax=Alicyclobacillus ac... 103 2e-20 UniRef50_B9LVL0 Helicase domain protein n=1 Tax=Halorubrum lacus... 103 3e-20 UniRef50_C7MHJ1 DNA/RNA helicase, superfamily II, SNF2 family n=... 103 4e-20 UniRef50_D1B6S6 Helicase domain protein n=7 Tax=Bacteria RepID=D... 103 4e-20 UniRef50_Q2J9F3 Helicase-like n=3 Tax=Actinomycetales RepID=Q2J9... 103 5e-20 UniRef50_A0YV27 Putative uncharacterized protein n=1 Tax=Lyngbya... 102 6e-20 UniRef50_A0RTY1 Superfamily II DNA/RNA helicase, SNF2 family n=1... 102 8e-20 UniRef50_A7AJJ3 Putative uncharacterized protein n=2 Tax=Parabac... 102 1e-19 UniRef50_B8HYW4 Helicase domain protein n=1 Tax=Cyanothece sp. P... 101 1e-19 UniRef50_C9RPI9 Helicase domain protein n=1 Tax=Fibrobacter succ... 101 1e-19 UniRef50_B8HUB7 Helicase domain protein n=16 Tax=Bacteria RepID=... 101 1e-19 UniRef50_A7HHH1 Helicase domain protein n=6 Tax=Bacteria RepID=A... 101 2e-19 UniRef50_Q2RKS1 Helicase-like n=1 Tax=Moorella thermoacetica ATC... 100 2e-19 UniRef50_A6P0F9 Putative uncharacterized protein n=1 Tax=Bactero... 100 2e-19 UniRef50_C8X714 Helicase domain protein n=2 Tax=Actinomycetales ... 100 3e-19 UniRef50_A1BHU0 Helicase domain protein n=5 Tax=Bacteria RepID=A... 100 4e-19 UniRef50_C7NT14 Helicase domain protein n=1 Tax=Halorhabdus utah... 100 4e-19 UniRef50_Q05ZJ6 Putative DEAD/H helicase n=1 Tax=Synechococcus s... 100 4e-19 UniRef50_D1P919 Helicase n=1 Tax=Prevotella copri DSM 18205 RepI... 100 5e-19 UniRef50_C4G029 Putative uncharacterized protein n=1 Tax=Abiotro... 99 7e-19 UniRef50_D2PYT4 Type III restriction protein res subunit n=1 Tax... 99 1e-18 UniRef50_C7IJW2 SNF2-related protein n=1 Tax=Clostridium papyros... 98 1e-18 UniRef50_A3JUX8 Helicase n=1 Tax=Rhodobacterales bacterium HTCC2... 98 2e-18 UniRef50_Q2LTY5 Snf2-related protein with C-terminal Helicase n=... 98 2e-18 UniRef50_B7RY95 Type III restriction enzyme, res subunit family ... 98 2e-18 UniRef50_C5VAI1 Helicase domain protein n=2 Tax=Corynebacterium ... 98 2e-18 UniRef50_B9T918 ATP-dependent helicase, putative n=1 Tax=Ricinus... 97 2e-18 UniRef50_Q9KE87 SNF2 helicase n=1 Tax=Bacillus halodurans RepID=... 97 4e-18 UniRef50_A1W7Y8 Helicase domain protein n=6 Tax=Proteobacteria R... 97 4e-18 UniRef50_A7HA03 Helicase domain protein n=6 Tax=Cystobacterineae... 96 5e-18 UniRef50_A4YAV4 Helicase domain protein n=5 Tax=Proteobacteria R... 96 5e-18 UniRef50_Q1GPS5 Type III restriction enzyme, res subunit n=1 Tax... 96 7e-18 UniRef50_A5D3Z6 Putative uncharacterized protein n=3 Tax=Bacteri... 96 9e-18 UniRef50_A1T433 Helicase domain protein n=1 Tax=Mycobacterium va... 96 9e-18 UniRef50_UPI0001BC2D00 putative helicase n=1 Tax=Brevibacterium ... 95 1e-17 UniRef50_A1WLN0 Type III restriction enzyme, res subunit n=1 Tax... 95 1e-17 UniRef50_A9GJG1 Putative uncharacterized protein n=2 Tax=Bacteri... 95 1e-17 UniRef50_Q5P8V3 ATP-dependent helicase n=4 Tax=Bacteria RepID=Q5... 95 2e-17 UniRef50_Q3MB27 Type III restriction enzyme, res subunit n=10 Ta... 94 2e-17 UniRef50_C5DA36 Helicase domain protein n=4 Tax=Bacillaceae RepI... 94 2e-17 UniRef50_A1U084 Helicase domain protein n=2 Tax=Bacteria RepID=A... 94 2e-17 UniRef50_C3QQJ4 Helicase domain-containing protein n=1 Tax=Bacte... 94 3e-17 UniRef50_Q06GB3 Putative helicase n=1 Tax=Rhodococcus sp. NS1 Re... 94 3e-17 UniRef50_Q18F85 ATP-dependent helicase HepA n=3 Tax=Halobacteria... 94 3e-17 UniRef50_C9RHU2 Helicase domain protein n=1 Tax=Methanocaldococc... 93 6e-17 UniRef50_Q5P890 Helicase (Snf2 family) n=10 Tax=Bacteria RepID=Q... 93 6e-17 UniRef50_Q07U65 SNF2-related protein n=2 Tax=Rhodopseudomonas pa... 93 6e-17 UniRef50_Q8NSD7 Superfamily II DNA/RNA helicases, SNF2 family n=... 92 7e-17 UniRef50_Q4UZA6 Helicase n=9 Tax=Proteobacteria RepID=Q4UZA6_XANC8 92 8e-17 UniRef50_A7VHM1 Putative uncharacterized protein n=6 Tax=Bacteri... 92 9e-17 UniRef50_Q9V0B0 Putative DEAH ATP-dependent helicase n=1 Tax=Pyr... 92 9e-17 UniRef50_A3PUQ9 Helicase domain protein n=4 Tax=Actinomycetales ... 92 1e-16 UniRef50_Q2LYC9 Superfamily II DNA/RNA helicase, SNF2 family n=1... 92 1e-16 UniRef50_C3MNX6 Helicase domain protein n=2 Tax=Sulfolobus islan... 92 1e-16 UniRef50_B9XSE7 SNF2-related protein n=1 Tax=bacterium Ellin514 ... 92 1e-16 UniRef50_A8M878 Helicase domain protein n=2 Tax=Actinomycetales ... 91 2e-16 UniRef50_Q3ZWH9 Putative helicase (Snf2 family) n=1 Tax=Dehaloco... 91 3e-16 UniRef50_C7MQ57 DNA/RNA helicase, superfamily II, SNF2 family n=... 90 5e-16 UniRef50_UPI0001B50036 helicase domain protein n=1 Tax=Streptomy... 90 6e-16 UniRef50_B1L8A6 Helicase domain protein n=4 Tax=Thermotoga RepID... 89 6e-16 UniRef50_C5A7B3 Type III restriction endonuclease, res subunit n... 89 8e-16 UniRef50_C6WH64 Helicase domain protein n=3 Tax=Actinomycetales ... 89 9e-16 UniRef50_A0L7C3 Helicase domain protein n=3 Tax=Bacteria RepID=A... 89 1e-15 UniRef50_D1JIN1 Putative uncharacterized protein rapA n=1 Tax=un... 89 1e-15 UniRef50_A9WJK0 Helicase domain protein n=2 Tax=Chloroflexus Rep... 87 2e-15 UniRef50_B1WTF4 Putative uncharacterized protein n=1 Tax=Cyanoth... 87 3e-15 UniRef50_A8H211 Helicase domain protein n=1 Tax=Shewanella peale... 87 4e-15 UniRef50_B2IY28 Helicase domain protein n=5 Tax=Cyanobacteria Re... 86 5e-15 UniRef50_UPI0001BC7C8F helicase domain protein n=1 Tax=Bacteroid... 86 6e-15 UniRef50_Q5V7B8 Putative DEAD/H helicase n=1 Tax=Haloarcula mari... 86 7e-15 UniRef50_C8NCL6 Helicase/SNF2 domain protein n=1 Tax=Cardiobacte... 86 1e-14 UniRef50_A6WGB4 Helicase domain protein n=1 Tax=Kineococcus radi... 85 1e-14 UniRef50_B8L1P8 ATP-dependent helicase HepA n=2 Tax=Proteobacter... 85 1e-14 UniRef50_B1L4S2 Helicase domain protein n=1 Tax=Candidatus Korar... 84 2e-14 UniRef50_B4WUE7 Helicase conserved C-terminal domain protein n=1... 84 3e-14 UniRef50_Q3MDI7 SNF2-related Helicase n=2 Tax=Cyanobacteria RepI... 84 3e-14 UniRef50_Q8U3A6 ATP-dependent RNA helicase hepa, putative n=2 Ta... 83 4e-14 UniRef50_D0TGQ7 Helicase domain-containing protein n=1 Tax=Bacte... 82 1e-13 UniRef50_C9YVZ8 Putative helicase SNF2 family protein n=1 Tax=St... 82 2e-13 UniRef50_B8KMQ8 Putative helicase, Snf2 family n=1 Tax=gamma pro... 81 2e-13 UniRef50_A1RYV5 Helicase domain protein n=1 Tax=Thermofilum pend... 81 2e-13 UniRef50_UPI0001C15DBC ATP-dependent helicase n=1 Tax=Cylindrosp... 81 2e-13 UniRef50_A3ZSC5 Type III restriction enzyme, res subunit n=1 Tax... 81 2e-13 UniRef50_A3MU25 Helicase domain protein n=1 Tax=Pyrobaculum cali... 80 4e-13 UniRef50_A3V5V0 ATP-dependent helicase HepA n=1 Tax=Loktanella v... 80 4e-13 UniRef50_B3G2N1 SNF2 family-related helicase n=1 Tax=Pseudomonas... 80 5e-13 UniRef50_D0L7N9 DEAD-like helicase n=1 Tax=Gordonia bronchialis ... 79 1e-12 UniRef50_C8U0N3 Predicted helicase n=2 Tax=Escherichia coli O103... 79 1e-12 UniRef50_A1U082 Helicase domain protein n=3 Tax=Proteobacteria R... 79 1e-12 UniRef50_Q89W29 Blr0864 protein n=1 Tax=Bradyrhizobium japonicum... 79 1e-12 UniRef50_D2M8T3 Helicase domain protein n=1 Tax=Rhodopseudomonas... 78 2e-12 UniRef50_B5IR31 Type III restriction enzyme, res subunit family ... 78 2e-12 UniRef50_A5PDD5 Putative helicase (Snf2 family) protein n=1 Tax=... 77 3e-12 UniRef50_UPI0001C15F0A hypothetical protein CRC_01468 n=1 Tax=Cy... 77 3e-12 UniRef50_C3QA78 Helicase n=3 Tax=Bacteroidales RepID=C3QA78_9BACE 77 3e-12 UniRef50_D0W197 Helicase/SNF2 domain protein n=3 Tax=Proteobacte... 77 3e-12 UniRef50_B2JBC5 Helicase domain protein n=4 Tax=Cyanobacteria Re... 77 5e-12 UniRef50_A9GV38 Helicase, putative n=1 Tax=Sorangium cellulosum ... 77 5e-12 UniRef50_Q2GBH2 Helicase-like protein n=6 Tax=Alphaproteobacteri... 76 6e-12 UniRef50_UPI0001AF5B89 SNF2 family protein n=1 Tax=Salmonella en... 75 8e-12 UniRef50_C6BED0 Helicase domain protein n=5 Tax=Proteobacteria R... 75 2e-11 UniRef50_C7RNW2 Helicase domain protein n=2 Tax=Bacteria RepID=C... 74 2e-11 UniRef50_C4ZN77 SNF2-related protein n=1 Tax=Thauera sp. MZ1T Re... 74 3e-11 UniRef50_B4WMM9 Helicase conserved C-terminal domain protein n=1... 74 3e-11 UniRef50_B1KKL5 Helicase domain protein n=1 Tax=Shewanella woody... 74 3e-11 UniRef50_UPI0001B4C480 helicase domain-containing protein n=1 Ta... 74 4e-11 UniRef50_B7ABD9 Helicase domain protein n=1 Tax=Thermus aquaticu... 73 5e-11 UniRef50_Q47S04 Helicase, C-terminal:DEAD/DEAH box helicase, N-t... 73 7e-11 UniRef50_A3NZY7 HeliCase, c-terminal:dead/deah box helicase, n-t... 72 1e-10 UniRef50_B4V8K7 Helicase domain containing protein n=1 Tax=Strep... 72 1e-10 UniRef50_Q47ZX3 SNF2 family protein n=1 Tax=Colwellia psychreryt... 71 2e-10 UniRef50_UPI0001926BDB PREDICTED: similar to Zinc finger, RAN-bi... 71 2e-10 UniRef50_Q1IY45 Helicase-like protein n=3 Tax=Deinococci RepID=Q... 71 2e-10 UniRef50_Q7XQJ0 OSJNBa0005N02.1 protein n=6 Tax=Magnoliophyta Re... 70 3e-10 UniRef50_B8P3F9 Predicted protein (Fragment) n=4 Tax=Agaricomyce... 70 3e-10 UniRef50_D1WRW2 Helicase domain protein n=2 Tax=Streptomyces Rep... 70 4e-10 UniRef50_A5UQI3 Helicase domain protein n=5 Tax=Bacteria RepID=A... 70 4e-10 UniRef50_A7HFJ5 Non-specific serine/threonine protein kinase n=1... 70 5e-10 UniRef50_UPI00016C3DA1 helicase, Snf2 family protein n=1 Tax=Gem... 70 5e-10 UniRef50_Q1QNM1 Helicase-like n=8 Tax=Bacteria RepID=Q1QNM1_NITHX 70 5e-10 UniRef50_D0MQ92 DNA repair and recombination protein RAD54 n=1 T... 70 5e-10 UniRef50_A1SC22 Helicase domain protein n=3 Tax=Actinomycetales ... 69 6e-10 UniRef50_A9T545 SNF2 family chromodomain-helicase n=1 Tax=Physco... 69 7e-10 UniRef50_A5UWB2 Helicase domain protein n=7 Tax=Bacteria RepID=A... 69 8e-10 UniRef50_A1UQF9 Helicase domain protein n=3 Tax=Actinomycetales ... 69 8e-10 UniRef50_Q5VNP2 Os01g0636700 protein n=7 Tax=Magnoliophyta RepID... 68 1e-09 UniRef50_B2JC66 SNF2-related protein n=1 Tax=Burkholderia phymat... 68 2e-09 UniRef50_C0FX26 Putative uncharacterized protein n=1 Tax=Rosebur... 68 2e-09 UniRef50_Q9FF11 Similarity to HepA-related protein Harp n=5 Tax=... 68 2e-09 UniRef50_Q3SW23 Superfamily II DNA/RNA helicases, SNF2 family n=... 67 3e-09 UniRef50_A4RZ94 Predicted protein n=2 Tax=Mamiellales RepID=A4RZ... 67 3e-09 UniRef50_C0GNM2 Helicase domain protein n=1 Tax=Desulfonatronosp... 67 5e-09 UniRef50_B3KZB3 DNA repair protein rad54, putative n=8 Tax=Plasm... 66 6e-09 UniRef50_Q23RY4 SNF2 family N-terminal domain containing protein... 66 7e-09 UniRef50_B3L200 SNF2-family protein, putative n=8 Tax=Eukaryota ... 66 7e-09 UniRef50_B9MK35 Helicase domain protein n=2 Tax=Anaerocellum the... 66 8e-09 UniRef50_Q9YF27 Putative uncharacterized protein n=1 Tax=Aeropyr... 65 1e-08 UniRef50_UPI000186EE6A DNA repair and recombination protein RAD5... 65 1e-08 UniRef50_C1ZI41 DNA/RNA helicase, superfamily II, SNF2 family n=... 65 1e-08 UniRef50_B9L3B7 Helicase, Snf2 family n=2 Tax=Bacteria RepID=B9L... 65 1e-08 UniRef50_B7P0R8 Helicase, putative (Fragment) n=1 Tax=Ixodes sca... 65 1e-08 UniRef50_Q8IAN4 DNA repair protein rad54, putative n=3 Tax=Plasm... 65 1e-08 UniRef50_A1SC34 Helicase domain protein n=1 Tax=Nocardioides sp.... 65 1e-08 UniRef50_D2QY10 Helicase domain protein n=1 Tax=Pirellula staley... 65 2e-08 UniRef50_Q9LJK7 DNA repair protein RAD54-like n=9 Tax=Magnolioph... 64 2e-08 UniRef50_Q8IJG6 Chromodomain-helicase-DNA-binding protein 1 homo... 64 2e-08 UniRef50_C6HV11 DNA/RNA helicase, SNF2 family n=1 Tax=Leptospiri... 64 3e-08 UniRef50_UPI0001AF474A helicase domain-containing protein n=1 Ta... 64 3e-08 UniRef50_D1HST8 Whole genome shotgun sequence of line PN40024, s... 64 3e-08 UniRef50_B6K0L8 ATP-dependent helicase RIS1 n=1 Tax=Schizosaccha... 64 3e-08 UniRef50_D1CIG5 Helicase domain protein n=1 Tax=Thermobaculum te... 64 4e-08 UniRef50_Q0D4X8 Os07g0598300 protein (Fragment) n=6 Tax=Poaceae ... 63 5e-08 UniRef50_Q7UGF2 Helicase, Snf2 family n=3 Tax=Bacteria RepID=Q7U... 62 1e-07 UniRef50_Q0RUT7 Possible ATP-dependent helicase n=1 Tax=Rhodococ... 62 1e-07 UniRef50_B9HP20 Chromatin remodeling complex subunit n=1 Tax=Pop... 62 1e-07 UniRef50_Q6BY55 DEHA2A12276p n=4 Tax=Saccharomycetaceae RepID=Q6... 62 2e-07 UniRef50_B9WDA2 ATP-dependent helicase, putative n=5 Tax=Sacchar... 62 2e-07 UniRef50_C1D0X1 Putative uncharacterized protein n=1 Tax=Deinoco... 61 2e-07 UniRef50_C2LZW0 Helicase, SNF2/RAD54 family n=1 Tax=Staphylococc... 61 2e-07 UniRef50_A4RVY4 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 61 2e-07 >UniRef50_B7VIC2 RNA polymerase-associated protein rapA n=29 Tax=Gammaproteobacteria RepID=RAPA_VIBSL Length = 969 Score = 1288 bits (3332), Expect = 0.0, Method: Compositional matrix adjust. Identities = 601/969 (62%), Positives = 772/969 (79%), Gaps = 3/969 (0%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F LGQRWISDTES+LGLGTVVA+DARTVT++F ++ ENR+YAR+D+PVTRV FN GD Sbjct: 1 MTFALGQRWISDTESDLGLGTVVAMDARTVTVMFAASEENRVYARTDAPVTRVAFNVGDV 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I +GW + VEEV E+ GLLTY+GTR DT+E+ V LRE+FL +++ F+KPQD+L+AGQI Sbjct: 61 IECQEGWSLSVEEVIEDKGLLTYLGTREDTQETEVTLREIFLSNQIRFNKPQDKLYAGQI 120 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DRMD F LRYRA +Q + P GL G R LIPHQL IAH+VGRRHAPRVLLADEVG Sbjct: 121 DRMDNFVLRYRALSNQYQQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG 180 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMI+HQQ+LSG AER+LI+VPETLQHQWLVEM+RRFNL F++FD+ER E+ Sbjct: 181 LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIESFA 240 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 ++ NPFDT+Q V+CSLDF R+S++R E E EWDLLVVDEAHHL WS+D PSREYQ +E Sbjct: 241 ESDNPFDTQQYVLCSLDFLRKSRKRYEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE 300 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 LAE+ GVLLLTATPEQLG ESHFARLRLLDP+RF+D+ FVEE+ Y PVADAV L Sbjct: 301 GLAENTSGVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEDQYAPVADAVTALF 360 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS--EDAQSARQELVSMLMDRHGTSRVLF 418 +G KL N N + E++ EQD+EPL + DS E+ ARQEL+ LMDRHGT RVLF Sbjct: 361 SGVKLENSAKNQITELLSEQDVEPLFRVIEGDSSEEEQALARQELIDNLMDRHGTGRVLF 420 Query: 419 RNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 RNTR +KGFPKR ++ + + +PTQY T+++VSG++G + + E RA MLYPE I+QEFE Sbjct: 421 RNTRAAIKGFPKRNVNLLPMDIPTQYTTSMRVSGMIGGKMAPEARAMKMLYPEEIFQEFE 480 Query: 479 GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 G++++WW FD RV WL+ + RS+K+LVI ++A+TALQLEQ LREREG+RA VFHEGM Sbjct: 481 GEDSSWWQFDSRVNWLIEKIQDKRSEKILVIASRASTALQLEQALREREGVRATVFHEGM 540 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 SI+ERD+AAA+FA+E+ GAQVL+CSEIGSEGRNFQFA+ +VMFDLPFNPDLLEQRIGRLD Sbjct: 541 SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD 600 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ DI IHVPYL+ T+Q++L RW+ EGL+AF TCPTGRT+YD + LI LAS + Sbjct: 601 RIGQLRDIDIHVPYLKGTSQAILARWFDEGLNAFAETCPTGRTVYDKYSDVLIEMLASGN 660 Query: 659 QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF 718 TE D++I+ + +++LK+ LE+GRDRLLE+HSNGG+KA +AE I D DTNL+ F Sbjct: 661 -TEQLDEVIEESAKLNQSLKSDLEKGRDRLLEMHSNGGDKAHEIAEKIASTDGDTNLVTF 719 Query: 719 AMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFIT 778 A++LFD IG+NQDD+G+N +V+TPS+HM+VP +PGL +G TITFDRE AL+RED FI+ Sbjct: 720 ALSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRETALSREDMNFIS 779 Query: 779 WEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPP 838 WEHP+I+ G+DL+LS G+S +SLLKNKALPVGT+L+EL+Y+V+AQAPK+ +++FLP Sbjct: 780 WEHPMIQGGIDLLLSEGVGASAVSLLKNKALPVGTILLELVYLVDAQAPKRSGISQFLPK 839 Query: 839 TPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKS 898 TP+R+++D GN+L+AQVEF++FNRQL+ VNRH SKLVN+VQ ++H +++ GE + Sbjct: 840 TPIRLMMDGRGNDLSAQVEFDSFNRQLSPVNRHLASKLVNSVQGEIHKLIEAGETHVLPK 899 Query: 899 ARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLD 958 + A+ + L+ EL RL+AL+AVNPNIRD+EL IE+ ++ + +A +LD Sbjct: 900 VEEVRQQAQKDMQTNLNGELERLQALKAVNPNIRDEELEVIEAQINELTGYISKAQVQLD 959 Query: 959 ALRLIVVTH 967 +LRLIVV+H Sbjct: 960 SLRLIVVSH 968 >UniRef50_A7MSB2 RNA polymerase-associated protein rapA n=212 Tax=Gammaproteobacteria RepID=RAPA_VIBHB Length = 969 Score = 1283 bits (3319), Expect = 0.0, Method: Compositional matrix adjust. Identities = 608/969 (62%), Positives = 771/969 (79%), Gaps = 3/969 (0%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F LGQRWISDTES+LGLGTVVA+DARTVTL+F ++ ENR+YAR+D+PVTRV FN GD Sbjct: 1 MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFAASEENRVYARNDAPVTRVTFNVGDV 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I +GW ++VEEV E+ GL TY GTR DT+E+ + LRE+FL + + F+KPQD+L+AGQI Sbjct: 61 IDCQEGWSLKVEEVLEDEGLYTYFGTREDTQETAIVLREIFLSNHIRFNKPQDKLYAGQI 120 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DRMD F LRYRA + EQ + P GL G R LIPHQL IAH+VGRRHAPRVLLADEVG Sbjct: 121 DRMDNFVLRYRALQNQFEQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG 180 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMI+HQQ+LSG AER+LI+VPETLQHQWLVEM+RRFNL F++FD+ER EA Sbjct: 181 LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA 240 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 +A NPFDT+Q V+CSLDF R+S++R E E EWDLLVVDEAHHL WS+D PSREYQ +E Sbjct: 241 EAENPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE 300 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 LAE GVLLLTATPEQLG ESHFARLRLLDP+RF+D+ FVEE++ Y PVADA+ L Sbjct: 301 GLAERTAGVLLLTATPEQLGRESHFARLRLLDPDRFYDYDAFVEEEEQYAPVADAITSLF 360 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS--EDAQSARQELVSMLMDRHGTSRVLF 418 +G KL ++ N + E++ EQD+EPL + SDS E SARQEL+ LMDRHGT RVLF Sbjct: 361 SGEKLPDEAKNQITELLSEQDVEPLFRIIESDSDEEAKASARQELIDNLMDRHGTGRVLF 420 Query: 419 RNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 RNTR +KGFPKR +H + + +P QY T+++VSG++G + + E RA LYPE I+QEFE Sbjct: 421 RNTRAAIKGFPKRNVHLMPMDIPQQYTTSMRVSGMIGGKMTPEARAVKNLYPEEIFQEFE 480 Query: 479 GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 G++++WW FD RV WL+ + RS KVLVI ++A+TALQLEQ LREREGIRA VFHEGM Sbjct: 481 GEDSSWWQFDSRVNWLLEKVKEKRSDKVLVIASRASTALQLEQALREREGIRATVFHEGM 540 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 SI+ERD+AAA+FA+E+ GAQVL+CSEIGSEGRNFQFA+ +VMFDLPFNPDLLEQRIGRLD Sbjct: 541 SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD 600 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ DI IHVPYL+ T+Q++L RW+ EGL+AF TCPTGR +YD + LI LAS D Sbjct: 601 RIGQKRDIDIHVPYLKDTSQAILARWFDEGLNAFAETCPTGRAVYDKYSDALIEMLASGD 660 Query: 659 QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF 718 D++I+ + ++ LK+QLEQGRDRLLE+HSNGGEKAQ + E I D DTNL+ F Sbjct: 661 -VSNLDEVIEESAKMNKELKSQLEQGRDRLLEMHSNGGEKAQQIVEKISSTDGDTNLVTF 719 Query: 719 AMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFIT 778 A++LFD IG+NQDD+G+N +V+TPS+HM+VP +PGL +G TITFDR+ AL+RED FI+ Sbjct: 720 ALSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMHFIS 779 Query: 779 WEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPP 838 WEHP+I+ G+DL++S G+S +SLLKNKALPVGT+L+EL+Y V+AQAPK+ + RFLP Sbjct: 780 WEHPMIQGGIDLLMSEGVGTSAVSLLKNKALPVGTILLELVYAVDAQAPKRSGITRFLPK 839 Query: 839 TPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKS 898 TP+RM++D GN+L+ QVEFE FNRQL+ VNRH GSKLV +VQ+D+H++++ G+A +E+ Sbjct: 840 TPIRMMMDARGNDLSPQVEFEGFNRQLSPVNRHLGSKLVTSVQKDIHSLIEAGDALVEQK 899 Query: 899 ARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLD 958 + A + + L+AEL RL+AL+AVNPNIRD+E+ +IE +++ ++QA +LD Sbjct: 900 VEEVRKQAHQDMQQSLNAELERLQALKAVNPNIRDEEIESIEEQIKELTGYINQAQVQLD 959 Query: 959 ALRLIVVTH 967 +LRLIVV+H Sbjct: 960 SLRLIVVSH 968 >UniRef50_A1RFP5 RNA polymerase-associated protein rapA n=21 Tax=Gammaproteobacteria RepID=RAPA_SHESW Length = 968 Score = 1179 bits (3051), Expect = 0.0, Method: Compositional matrix adjust. Identities = 558/970 (57%), Positives = 749/970 (77%), Gaps = 6/970 (0%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 MPF LGQRWISDTESELGLGTVV V+ R VT+LFP+TGENR+++R+++P+TRV +NPGDT Sbjct: 1 MPFALGQRWISDTESELGLGTVVQVEGRMVTVLFPATGENRMFSRAEAPLTRVTYNPGDT 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 + SH+GW + +E++ E++GL+ Y G +T E V LRE L+ + F+KPQDRLFAGQI Sbjct: 61 VESHEGWSLTIEDLTEKDGLVIYHGIHSETGEQ-VTLRETLLNHNIRFNKPQDRLFAGQI 119 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DR+DRF +RY+ + + GL+G R LIPHQ+ IAH+VGRR+APRVLLADEVG Sbjct: 120 DRLDRFGVRYQCQMLRHKLATSDLLGLQGPRVGLIPHQMWIAHEVGRRYAPRVLLADEVG 179 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAG+I+HQQLL+G AERVL+IVP+TL+HQWLVEMLRRFNLRF++FD++R EA Sbjct: 180 LGKTIEAGLIIHQQLLTGRAERVLVIVPDTLRHQWLVEMLRRFNLRFSVFDEDRCVEAYA 239 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 D NPF TEQLVICSL+ R+ K+RL+ +A+WDLLVVDEAHHL W+E+APSR YQ +E Sbjct: 240 DHDNPFYTEQLVICSLELLRK-KKRLDQALDADWDLLVVDEAHHLEWTEEAPSRAYQVVE 298 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 L+E VPGVLLLTATP+QLG ESHFARLRLLDP+RF+D+ F+ E+ +Y+ VA A L Sbjct: 299 ALSEVVPGVLLLTATPDQLGHESHFARLRLLDPDRFYDYDAFLAEENSYKDVAIAAEALA 358 Query: 361 AGNKLSNDELNMLGEMIGEQDIEP---LLQAANSDSEDAQSARQELVSMLMDRHGTSRVL 417 KL + +N L E++ E+DI P L+QA DS+ Q+AR EL+ L+DRHGT RVL Sbjct: 359 GNAKLPDAAINSLTELLSEKDIAPSIRLIQADGIDSDVQQAARSELLQELLDRHGTGRVL 418 Query: 418 FRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEF 477 +RN+R VKGFPKR + +P QY TA +VS +MG K+ E +A L PE++YQEF Sbjct: 419 YRNSRASVKGFPKRFFNPHPQTMPEQYLTAARVSSMMGGHKTLEAKAAQALSPEKLYQEF 478 Query: 478 EGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEG 537 E ++A+WW FDPRV+WL+ +L SHRS+KVL+I ++A TAL LE+ LR REGI+A VFHEG Sbjct: 479 EDNSASWWKFDPRVDWLIAFLKSHRSKKVLIIASQAETALSLEEALRTREGIQATVFHEG 538 Query: 538 MSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL 597 MSIIERD+A A+FA+E+ GAQ L+CSEIGSEGRNFQFASH+V+FDLP NPDLLEQRIGRL Sbjct: 539 MSIIERDKAGAYFAQEEGGAQALICSEIGSEGRNFQFASHLVLFDLPLNPDLLEQRIGRL 598 Query: 598 DRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASP 657 DRIGQ +DIQIH+PYLE TAQ L++WYH+GL+AFE TCP+G +Y DL+N L Sbjct: 599 DRIGQKNDIQIHLPYLEDTAQERLMQWYHQGLNAFELTCPSGHVLYAEFAEDLLNVLVGD 658 Query: 658 DQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIA 717 D E +L+ + + +++ LK +EQGRD+LLEI+S+GG++A+A+ E + + D++T LI Sbjct: 659 DADE-LTNLLNHTQSRYKELKHAMEQGRDKLLEINSHGGDRAKAIVERLAQNDENTQLIG 717 Query: 718 FAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFI 777 + L+DIIG++Q+D+G+N I+L PS+HM+ P +PGL EDG+T+TFDR+ AL+R+D I Sbjct: 718 SVIRLWDIIGVDQEDKGENSIILRPSEHMMFPTYPGLPEDGVTVTFDRDTALSRDDIALI 777 Query: 778 TWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLP 837 T EHPL++ GLDLI +TG++++++LKNKALP GTL +ELIY+ +A APK QL R+LP Sbjct: 778 TQEHPLVQTGLDLITGSETGTTSVAVLKNKALPAGTLFLELIYMADASAPKSSQLYRYLP 837 Query: 838 PTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEK 897 PTP+R+LLDKNGN+L+A+V++ +F++QL+AVNRH G KLV A Q +H + GE + Sbjct: 838 PTPIRILLDKNGNDLSAKVDYASFDKQLSAVNRHIGGKLVTASQPILHPLFAKGEEYAQA 897 Query: 898 SARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRL 957 + L+ AR + +L+ EL RLE+L+AVNPNIR++EL + + Q++ LD + +L Sbjct: 898 AVDELVIQAREKMTTQLTGELDRLESLKAVNPNIREEELEYLRNQMQELNTYLDASQLQL 957 Query: 958 DALRLIVVTH 967 DA+R+++V+H Sbjct: 958 DAIRMVLVSH 967 >UniRef50_A3MZ32 RNA polymerase-associated protein rapA n=32 Tax=Gammaproteobacteria RepID=RAPA_ACTP2 Length = 969 Score = 1142 bits (2955), Expect = 0.0, Method: Compositional matrix adjust. Identities = 557/972 (57%), Positives = 715/972 (73%), Gaps = 18/972 (1%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F +GQRWIS++E+ LGLG V A D RTVT+ FP+ E R+YA S +P+TRV F GD I Sbjct: 2 FVVGQRWISESENNLGLGIVTASDNRTVTIQFPAAEEERIYALSVAPLTRVQFQKGDRIN 61 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 S +GWQ+ VEEV E G + Y+G R D+ E V L E+ LD K+ FSKPQDRLF+ QIDR Sbjct: 62 SVEGWQLDVEEVVENQGFIIYLGKRADSGEEAV-LPEMQLDHKVSFSKPQDRLFSAQIDR 120 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 DRFALRYRA ++ QF+ P G+RG R SLIPHQL+IA +VG+R APRVLLADEVGLG Sbjct: 121 SDRFALRYRALQHQQAQFQSPLRGMRGIRASLIPHQLHIAKEVGQRVAPRVLLADEVGLG 180 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDER---YAEAQ 239 KTIEAGMIL QQL SG ERVL++VPE+LQHQWLVEMLRRFNL+F+LFD+ER + +A Sbjct: 181 KTIEAGMILQQQLFSGRVERVLVLVPESLQHQWLVEMLRRFNLKFSLFDEERCSDFDKAD 240 Query: 240 HD----AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 D + NPFD+E LVI S+D+ S R + + + WD+L+VDEAHHL WSE+ PS Sbjct: 241 EDGNDVSENPFDSEALVIASIDWLESSPNRAKQVLASHWDMLIVDEAHHLAWSENEPSVG 300 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 YQ +E+L++ P VLLLTATPEQLG ESHFARL LLD +RF+D+ F+ EQK+Y+PVADA Sbjct: 301 YQFVERLSKQTPAVLLLTATPEQLGQESHFARLALLDADRFYDYHSFIAEQKDYKPVADA 360 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSE---DAQSARQELVSMLMDRHG 412 VA LL LS+DE N + E++ E+D EP+ + NS+ D RQEL+ L+DRHG Sbjct: 361 VATLLNDKPLSHDEQNSIAELLSEKDTEPMFKVINSEKSKENDRLQVRQELIRELIDRHG 420 Query: 413 TSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPER 472 TSRVLFRNTR GVKGFP R H I L +P+QY A+KV G+MG D LYPER Sbjct: 421 TSRVLFRNTRQGVKGFPHRVYHQITLEMPSQYTNALKVMGMMGGVTK-----DDQLYPER 475 Query: 473 IYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAA 532 ++Q A W +FDPR+EWL+ +L +HR +K+LVIC +A TA+ LEQ+LRERE IR+A Sbjct: 476 LFQRM-NPAAKWADFDPRIEWLITFLKNHRDEKILVICKQADTAIALEQILREREAIRSA 534 Query: 533 VFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQ 592 VFHE MSI+ERDRA+A+FA+ + GAQVL+ S IGSEGRNFQFAS++V+F+LP NPDLLEQ Sbjct: 535 VFHEKMSIVERDRASAYFAQMEEGAQVLISSSIGSEGRNFQFASNLVLFNLPDNPDLLEQ 594 Query: 593 RIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLIN 652 IGRLDRIGQ +DIQIHVP E + Q VL WYH+GL+AFE TCP G ++ +L Sbjct: 595 SIGRLDRIGQKNDIQIHVPCFENSMQMVLATWYHQGLNAFEETCPMGAALFREFGEELEG 654 Query: 653 YLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDD 712 +L +P Q GFD+ + ++ + LKA+LEQGRDRLLE++SNGGE AQALAE+I ++D++ Sbjct: 655 FLKNP-QAVGFDEFLVRTFKRQQQLKAELEQGRDRLLELNSNGGEVAQALAEAIAKEDNN 713 Query: 713 TNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALARE 772 +L+ FA++LFD+IG+ Q+D G+ IV++P+ HMLVPDFPG++ED T+TFDR++AL RE Sbjct: 714 PHLVNFALSLFDVIGLEQEDLGEQSIVISPTGHMLVPDFPGIAEDSTTVTFDRQLALMRE 773 Query: 773 DAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQL 832 D +F+TW+HP+IRNG+DLI SGD G S ISLL NK LP GTLL+E IY+VE QAPK L L Sbjct: 774 DVEFLTWDHPMIRNGIDLITSGDIGKSAISLLINKHLPAGTLLLEAIYMVETQAPKGLNL 833 Query: 833 NRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGE 892 RFLPPTPVR+LL GN++AAQV F +QL VN+ +K+ Q D+ ++ + E Sbjct: 834 TRFLPPTPVRILLGNKGNDMAAQVSFTGLEKQLKPVNKQMANKIAKMAQADIKKLIDISE 893 Query: 893 AQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQ 952 +I LI+ A +AD LSAEL RL +L+AVN NIR DE+ A+E R + ++ + Sbjct: 894 QKIAAKLPELIEKASQDADSTLSAELYRLTSLQAVNKNIRADEIEALEQQRIESLKQIAL 953 Query: 953 AGWRLDALRLIV 964 A WRLD+LR+IV Sbjct: 954 ANWRLDSLRVIV 965 >UniRef50_A5UAT0 RNA polymerase-associated protein rapA n=16 Tax=Haemophilus influenzae RepID=RAPA_HAEIE Length = 923 Score = 1037 bits (2682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/971 (52%), Positives = 685/971 (70%), Gaps = 51/971 (5%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 MPF +GQRW+S++E+ LGLG + A+D RTVT+ FP+ E R+YA + +P++R++F+ G+T Sbjct: 1 MPFAIGQRWLSESENALGLGVITALDQRTVTIYFPAADETRIYAIAQAPLSRIVFSKGET 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 ++ GWQ ++ +V+ NGLL Y+ + ++ V ++E + + FS+ +DRLF+ QI Sbjct: 61 LSHQAGWQGEILDVQNMNGLLFYLVK--NPQDEDVIVQERDISPIISFSQAKDRLFSAQI 118 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DR FALRYR + QF+ P GLRG R LIPHQL+IA +VG R PRVLLADEVG Sbjct: 119 DRSTHFALRYRTLCHQQAQFKSPLRGLRGTRAGLIPHQLHIAAEVGNRVNPRVLLADEVG 178 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMIL QL + +RVLIIVPETLQHQWLVEMLRRFNL FALFD+ER + Sbjct: 179 LGKTIEAGMILQNQLFAEKVQRVLIIVPETLQHQWLVEMLRRFNLHFALFDEERCNDFDL 238 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 DA NPF TE L+ICSL++ R+E +A++D L+VDEAHHLVWSE +PS Y +E Sbjct: 239 DAVNPFTTESLIICSLNWLETHPNRVEQALDAQFDCLIVDEAHHLVWSETSPSAAYLFVE 298 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 QLA +P VLLLTATPEQLG ESHFARLRLLDP RF D+ FV+EQ++Y+PV +AV LL Sbjct: 299 QLARIIPSVLLLTATPEQLGQESHFARLRLLDPERFFDYQTFVKEQEHYQPVVNAVESLL 358 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQA-ANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 A LS E N + +++ EQD+EPL +A A+++ E+ Q ARQEL+ L+DRHGT R+LFR Sbjct: 359 ANKALSAVEKNHISDLLLEQDVEPLFKAIASNNDEEQQRARQELIQALIDRHGTGRMLFR 418 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 NTR GVKGFP R+Y + Sbjct: 419 NTRQGVKGFP-----------------------------------------HRVYHQI-- 435 Query: 480 DNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMS 539 T + +++WL+ +L HR +K+ VIC AATA+QLEQ+LRERE IRAAVFHE MS Sbjct: 436 ---TLSEENDKIDWLIDFLKLHRDEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMS 492 Query: 540 IIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDR 599 IIERDRAAA+FA+ + GAQVLL S IGSEGRNFQFA+++V+FDLP NPDLLEQ IGRLDR Sbjct: 493 IIERDRAAAYFADLENGAQVLLSSSIGSEGRNFQFAANLVLFDLPTNPDLLEQCIGRLDR 552 Query: 600 IGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDL--INYLASP 657 IGQ D+QI++P + + QS L RWY+EGL+AFE TCP G ++ ++L + ++ Sbjct: 553 IGQKRDVQIYMPCAKDSPQSRLARWYNEGLNAFEQTCPMGMALFSQFADELEKVRSNSTA 612 Query: 658 DQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIA 717 F L+K + E LK +LE+GRDRLLE++S+GGE+AQALA+ I ++D+ L+ Sbjct: 613 LSENEFSGLLKQTKTAREKLKIELEKGRDRLLELNSHGGEQAQALADQIADEDNSPELVN 672 Query: 718 FAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFI 777 FA+ LFDIIG+ Q+D G N IV++P+ MLVPDFPGL E+G+T+TFDRE+ALARE+ +F+ Sbjct: 673 FALKLFDIIGVEQEDLGANSIVISPTGTMLVPDFPGLKEEGVTVTFDRELALAREEMEFL 732 Query: 778 TWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLP 837 TW+HP+IR G+DL+ SGD G + ++LL NK LP GTLL+ELIYVVE+Q+PK LQLNRFLP Sbjct: 733 TWDHPMIRQGIDLVASGDIGKAAMALLVNKQLPAGTLLIELIYVVESQSPKGLQLNRFLP 792 Query: 838 PTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEK 897 PTP+R+LLD GNN+ QV FET + +L + ++ +++V + ++ +++ G+ ++ Sbjct: 793 PTPIRLLLDNKGNNMGEQVAFETLHSKLKPLGKNIANQMVKMARSNIESLITRGDQLVKS 852 Query: 898 SARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRL 957 A +I A+N+AD++LSAE++RL+ALRAVN NIR E+ +E R Q ++ L +A WRL Sbjct: 853 LAEPIIAEAKNQADQQLSAEINRLQALRAVNKNIRQSEIDILEQQRTQSLDELSKANWRL 912 Query: 958 DALRLIVVTHQ 968 D LR+IV + Sbjct: 913 DCLRVIVTNKE 923 >UniRef50_C6AQR6 RNA polymerase-associated protein RapA (ATP-dependenthelicase hepA) n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6AQR6_AGGAN Length = 952 Score = 1026 bits (2653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 506/972 (52%), Positives = 670/972 (68%), Gaps = 24/972 (2%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F +GQRWIS+TE+ LGLG + AVD R VT+ FP+ E R+YA +P++RV F GD Sbjct: 1 MAFAIGQRWISETENNLGLGVISAVDFRQVTIDFPAAQEQRIYAVQSAPLSRVQFRLGDQ 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 + +GW +V V E NGLL Y+ ++ V+ E+ L ++ FS+PQ+RLF QI Sbjct: 61 VQHIEGWHGEVTNVAENNGLLFYLVQPQAGQDRVVS--EMELAHRISFSRPQERLFFAQI 118 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DR + F LRY A +Y QF+ P GLRG LIPHQL+IA + G+R PRVLLADEVG Sbjct: 119 DRNEHFVLRYHALQYQKAQFQSPLRGLRGIHAGLIPHQLHIAKEAGQRVTPRVLLADEVG 178 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAE--- 237 LGKTIEAGMIL QQL + RVLIIVPETLQHQWLVEMLRRFN F+LFD+ER A+ Sbjct: 179 LGKTIEAGMILQQQLFAEKVRRVLIIVPETLQHQWLVEMLRRFNFHFSLFDEERCADFAA 238 Query: 238 -AQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREY 296 + NPF TE L+IC+LD+ + QR++ L AE+D+L+ DE HHL++ E PS EY Sbjct: 239 TEDREEVNPFTTESLIICALDWLVQHPQRVQQLLAAEFDMLIADEVHHLLYDEINPSLEY 298 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAV 356 Q ++QL + +P VLLLTATPEQLG +SHFARL LLDP+RFHD+ F+EEQ++Y+P+A+A Sbjct: 299 QLVQQLTQQIPAVLLLTATPEQLGQQSHFARLNLLDPHRFHDYRAFLEEQQHYQPIAEAA 358 Query: 357 AMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRV 416 LLA LS E N + ++GE D + ++ L+ L+DRHGT R+ Sbjct: 359 QSLLANKPLSAVEKNKISALLGE------------DINFNGTNKETLIKQLIDRHGTGRL 406 Query: 417 LFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQE 476 LFRNTR V+GFPKR + I LP P QY+ AIK R E + LYPE +E Sbjct: 407 LFRNTRQSVQGFPKRIYYPIALPQPKQYENAIKT-----LRAFDEHPVQCALYPEHFMRE 461 Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 N WW FDPRV+WL+ +L HR +KV VIC A TA+QLEQ+LRE+EGIR+AVFHE Sbjct: 462 LNA-NTAWWEFDPRVQWLIDFLKQHRQEKVFVICRYAGTAIQLEQILREKEGIRSAVFHE 520 Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 MSI+ERDRAAA+F +++ AQVLL S IGSEGRNFQFAS +V+F+LP NPDLLEQ IGR Sbjct: 521 KMSIVERDRAAAYFTQQENAAQVLLSSNIGSEGRNFQFASRLVLFNLPENPDLLEQCIGR 580 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS 656 LDRIGQ DIQI++PY AQ+ L WYH GL+AF TCP G +++ L L + Sbjct: 581 LDRIGQTKDIQIYLPYFTDGAQATLADWYHLGLNAFNETCPMGALLFEQFGEALQKTLEN 640 Query: 657 PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLI 716 P E LI++ +++ LK LEQGRD LLE++SNGGE A+ LA+ I QD L+ Sbjct: 641 PTALEAQKALIEHTQQERLRLKQLLEQGRDLLLELNSNGGESAKQLAQEIAAQDGSPELV 700 Query: 717 AFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQF 776 FA+NLFD+IG+ Q+D G+ IV+TP+ MLVP+FPGL E+G+T+TFDR++ALARE+ +F Sbjct: 701 DFALNLFDVIGVEQEDLGEKSIVITPTGTMLVPEFPGLKEEGVTVTFDRQLALAREELEF 760 Query: 777 ITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFL 836 +TW+HP+I +G+DLI SGD G S ++LL NK LP GTLL+EL+YVVE QAP+ LQL RFL Sbjct: 761 LTWDHPMIYHGIDLITSGDIGKSAVALLPNKHLPAGTLLLELVYVVETQAPQGLQLTRFL 820 Query: 837 PPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIE 896 PPTP+R+LLD GN+LA QV F+ R+L ++R+ +K+ ++ ++ ++ GE + Sbjct: 821 PPTPIRLLLDSKGNDLAQQVVFDHLQRKLKPMDRNMANKVAKMLRPNIETLITQGEKVMA 880 Query: 897 KSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWR 956 + ++ +I A +A + L EL+RL ALR VN NIR DE+ +++ R+Q+++ L QA WR Sbjct: 881 QQSKEIIANAEQQARQHLDEELTRLIALRKVNKNIRQDEIDTLQTQRKQMLQCLQQATWR 940 Query: 957 LDALRLIVVTHQ 968 LD LR+IV + Sbjct: 941 LDCLRVIVTNKE 952 >UniRef50_B7V6T4 RNA polymerase-associated protein rapA n=24 Tax=Gammaproteobacteria RepID=RAPA_PSEA8 Length = 950 Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/964 (52%), Positives = 657/964 (68%), Gaps = 27/964 (2%) Query: 6 GQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHD 65 GQRWISD+E+ELGLGT++A D R +T+L+P+TG+ R YA ++P+TRV F PGD +T + Sbjct: 9 GQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFAPGDEVTHFE 68 Query: 66 GWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDR 125 GW+M V EV+E GLL Y G E+ L E L + + F DRLFAGQID + Sbjct: 69 GWKMTVREVEESEGLLVYHGLTAQNEQ--CTLPETQLSNFIQFRLASDRLFAGQIDPLPW 126 Query: 126 FALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTI 185 F+LRY + S+ + GL G R I HQL+IA +V R APRVLLADEVGLGKTI Sbjct: 127 FSLRYHTLERRSQLLQSSLWGLGGARAQPIAHQLHIAREVADRMAPRVLLADEVGLGKTI 186 Query: 186 EAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNP 245 EAG+I+H+QLLSG A RVLI+VPE LQHQWLVEM RRFNL+ ALFD ER+AE+ DA NP Sbjct: 187 EAGLIIHRQLLSGRAGRVLILVPENLQHQWLVEMRRRFNLQVALFDKERFAES--DASNP 244 Query: 246 FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEH 305 F+ QL + +L++ + ++ + L A WDLLVVDEAHHLVW +D S EY +EQLAE Sbjct: 245 FEDTQLALVALEWLKEDERAQDALFAAGWDLLVVDEAHHLVWHQDQVSAEYALVEQLAEI 304 Query: 306 VPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKL 365 +PGVLLLTATPEQLG +SHFARLRLLDPNRFHD F E + YRPVA+AV LL L Sbjct: 305 IPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLEAFRRESEQYRPVAEAVQELLDHGSL 364 Query: 366 SNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGV 425 S + +G + E L D E AR LV L+DRHGT RVLFRNTR V Sbjct: 365 SAGARKAIHGFLGSEGDELLASVEGGDEE----ARSRLVRELLDRHGTGRVLFRNTRAAV 420 Query: 426 KGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ---EFEGDNA 482 +GFP+RELH LP+P+QY+ + A + + LYPE +Q E DN Sbjct: 421 QGFPQRELHAYPLPMPSQYEE-------LPAGEHPD------LYPEVNFQQQWEDGDDNN 467 Query: 483 TWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 WW FDPRVEWL+ L + KVLVICA A TAL LE LR R GI A VFHEGMSI+E Sbjct: 468 RWWRFDPRVEWLIDTLKMLKQFKVLVICAHAETALDLEDALRLRSGISATVFHEGMSILE 527 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 RDRAAA+FA+E+ GAQVL+CSEIGSEGRNFQFA H+V+FDLP +PDLLEQRIGRLDRIGQ Sbjct: 528 RDRAAAYFADEEFGAQVLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQ 587 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG 662 H IQ+HVP+LE +AQ L +WYH+ L+AF +TCPTG + L+ L + + Sbjct: 588 RHTIQLHVPHLENSAQQRLFQWYHQALNAFLNTCPTGNALQHEFGPRLLPLLDG-GEDKA 646 Query: 663 FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNL 722 +D L+ R + EAL+A+L GRDRLLE++S G + +AL E+IEEQDDD L + L Sbjct: 647 WDALLAEGRARREALEAELHSGRDRLLELNSGGAGEGEALVEAIEEQDDDFALPIYMERL 706 Query: 723 FDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHP 782 FD GI+ +D +N ++L PS+ ML FP ++G+TIT+DR ALARED QF+TWEHP Sbjct: 707 FDAYGIHSEDHSENALILKPSEKMLDAGFPLGDDEGVTITYDRAQALAREDMQFLTWEHP 766 Query: 783 LIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR 842 +++ G+DL+LSG G+++++L+KNKAL GT+L+EL++V EA AP+ LQL R+LPP +R Sbjct: 767 MVQGGMDLVLSGSMGNTSVALIKNKALKPGTVLLELLFVSEAVAPRALQLGRWLPPQALR 826 Query: 843 MLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAI-LQLGEAQIEKSARA 901 LLD NGN+LA +V ET N QL +V R + +K V A Q+DV A + E +I Sbjct: 827 CLLDANGNDLAGRVSLETLNDQLESVPRVSANKFVQA-QRDVLAKQFDVAEGKIVPRHEE 885 Query: 902 LIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALR 961 + A+ + + EL+RL AL+AVNP++RD EL ++ + R++ + LD+A RL+A+R Sbjct: 886 RVARAKQQFAAAMDEELARLTALKAVNPSVRDSELDSLRTQREEGLALLDKASLRLEAIR 945 Query: 962 LIVV 965 ++V Sbjct: 946 ILVA 949 >UniRef50_B4RZE3 RNA polymerase-associated protein HepA n=3 Tax=Alteromonadales RepID=B4RZE3_ALTMD Length = 947 Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust. Identities = 455/969 (46%), Positives = 629/969 (64%), Gaps = 38/969 (3%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F++GQRW+S+TE+ELGLG ++ D R+V +L+P+TGE R Y + D+P+TR++F G+T+ Sbjct: 7 FSVGQRWLSNTETELGLGVIMGTDFRSVEVLYPATGEARKYTKQDAPLTRLIFEIGETVK 66 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 S DGW+M + E +E G+ Y G R DT+ + V L E LDS + ++P+ RLF+ Q+D Sbjct: 67 SQDGWEMTITEKEESQGVCIYHGLREDTK-AQVRLPETMLDSHIQLNQPERRLFSQQLDN 125 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 F LR RA Y + R GL G R SLIPHQL+IA +VG RHAPRVLLADEVGLG Sbjct: 126 PKWFDLRERALDYQYDYLRSSTIGLAGARISLIPHQLHIASEVGGRHAPRVLLADEVGLG 185 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY-----AE 237 KTIEA +I+HQQL +G AERVLI+VP++L HQWLVEMLRR NL FA++D+ R +E Sbjct: 186 KTIEAALIIHQQLKTGRAERVLILVPDSLVHQWLVEMLRRVNLPFAIYDESRCDAIEESE 245 Query: 238 AQHDA--YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 A DA NPF+ +QLV+CS+DF +S++R + + A WDL+VVDEAHHL WS +A S E Sbjct: 246 AS-DAGEVNPFENDQLVLCSIDFLSQSEKRQKQVQAASWDLMVVDEAHHLAWSSEAQSAE 304 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 Y+ +E LA PGVLLLTATP+QLG ESHFARLRLLDP RFH + F+EE+ Y +ADA Sbjct: 305 YKCVEALANLTPGVLLLTATPDQLGHESHFARLRLLDPARFHSYNAFLEEESKYSQLADA 364 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR 415 VA LL+ + ++ + L E P + D ++ R L+ L+D HGT R Sbjct: 365 VAPLLSDAEPNDKQRTKLAEFA------PDVMEHTGDLSTPEN-RHALLHQLIDCHGTGR 417 Query: 416 VLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ 475 +LFRN R ++GFP+R+L +L LP Y A+ + + LYPER+ Sbjct: 418 MLFRNRRANIEGFPERKLSAYELALPEVYADAVSGGDLTYS-----------LYPERMAN 466 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFH 535 +W DPRVEWL+ ++ S + +K+L+ICA A TA +L +V+R + GIR +VFH Sbjct: 467 VVN----SWTKHDPRVEWLLDFMQSVKPEKILLICASARTAQELGEVIRTQSGIRHSVFH 522 Query: 536 EGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIG 595 EGMSI+ERD+AA +FA+E+ GAQ+LLCSEIGSEGRNFQFA H+V+FDLP PDLLEQRIG Sbjct: 523 EGMSIVERDKAAHYFADEEEGAQILLCSEIGSEGRNFQFAHHLVLFDLPITPDLLEQRIG 582 Query: 596 RLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLA 655 RLDRIGQ +QIHVPYL KTAQ VL+ WYHEGL+AFE TCPTG ++D V L+ Sbjct: 583 RLDRIGQTQTVQIHVPYLAKTAQHVLLDWYHEGLNAFEKTCPTGSGVFDDVKPLLVGACL 642 Query: 656 SPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 PD D+LI + L AQLE GRDRLLE++++G + + L E I D + +L Sbjct: 643 HPDDISARDELINMSVTLNSQLVAQLEAGRDRLLELNASGEGRVEQLLEDIVTLDSEQDL 702 Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQ 775 F +FD IG+ Q+++G++ +L P++ M V PGL +G+T+T+ R VA E+ Q Sbjct: 703 SRFMGRVFDAIGVQQEEKGNDCFILMPTESM-VSQLPGLDPEGMTVTYKRRVATTLENVQ 761 Query: 776 FITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRF 835 F++W+HPL+ +D+IL+ G S++ + +LP G +E ++V+ AQAPK LQL RF Sbjct: 762 FLSWDHPLVHTAIDVILTDVHGKSSMGFIAEPSLPKGAYWIEALFVLHAQAPKALQLGRF 821 Query: 836 LPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQI 895 LP TPVR+ LD GN A+ + F+ + + R ++L+ A+QQ + ++ Sbjct: 822 LPQTPVRVCLDAQGN--ASDLSFDVKRK----IGRKISAQLLKALQQPLELAIEKARKLA 875 Query: 896 EKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGW 955 + A A N L E+ RL L+ NP +RD E+ IE+ + + + +A Sbjct: 876 HQQANQKQHDALNTMHLTLGEEIQRLRDLQKRNPAVRDSEIEFIETQMNALDKVIQEADV 935 Query: 956 RLDALRLIV 964 +LDALR++V Sbjct: 936 QLDALRIVV 944 >UniRef50_C6MG44 SNF2-related protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MG44_9PROT Length = 966 Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/971 (45%), Positives = 622/971 (64%), Gaps = 15/971 (1%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRWI D + +LGLGTV V+ R VTL+F +TGE R YAR +P+TRV+F GDT+ Sbjct: 4 FKPGQRWICDVDLQLGLGTVQTVEHRIVTLIFKATGEIRSYARQSAPLTRVVFKSGDTVG 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 S+D ++V EV E NGL+ Y + ++ S + L E L L+ ++P +RLF GQ D+ Sbjct: 64 SYDNAVLKVTEVHERNGLVVY--SCVNESGSSIELAEAQLAHHLLLNRPAERLFTGQFDQ 121 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 F +RY+ + + P GL G RTSLIPHQL IAH+VGRR+APRVLLADEVGLG Sbjct: 122 DKWFRIRYQTLLIRNRLAQAPLYGLVGTRTSLIPHQLYIAHEVGRRYAPRVLLADEVGLG 181 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA--EAQH 240 KTIEAG+ILHQQLL+ A+RVLI+VPETL HQWLVEMLRRFNL+F++FD+ R E Sbjct: 182 KTIEAGLILHQQLLTERAKRVLIVVPETLIHQWLVEMLRRFNLQFSIFDEARCLALEESE 241 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 + NPF +EQL++CSL+F R+ +R + + WDLLVVDEAHHL WS+ A S Y IE Sbjct: 242 EGENPFHSEQLILCSLNFLRQYPKRFQTALQGNWDLLVVDEAHHLHWSQQAVSPGYAMIE 301 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 QLA GVLLLTATPEQLG SH+ARLRLLDP+RF+ F+ F+ E+++Y P+A AV LL Sbjct: 302 QLAACTKGVLLLTATPEQLGKASHYARLRLLDPHRFNSFSAFIAEEQSYEPIAQAVEALL 361 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLL---QAANSDSEDAQSARQELVSMLMDRHGTSRVL 417 G L+ + ++ + + + LL Q +D R +L +L+DRHGT R+L Sbjct: 362 EGQALNAEIRQLIADTLNAAQAQVLLACLQDPAADQSQILKTRNKLAELLLDRHGTGRIL 421 Query: 418 FRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ-E 476 FRNTR +KGFP+R+L + L LP +YQ + + +A + R +L PE +YQ Sbjct: 422 FRNTRAAIKGFPERKLVAVPLALPVEYQQCL-----ITFETTALSQPRLLLCPELLYQAR 476 Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 E + W DPR+ WL L + +KVLVI A T + Q L+ + G VFHE Sbjct: 477 AEPEQPYWTEIDPRISWLSTTLRQLKPEKVLVIAANTQTTRDIAQALKMQTGQHIPVFHE 536 Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 MS+IERDRAAA+FA+++TG+Q+L+CSEIGSEGRNFQF+ H+V+FDLP NPDLLEQRIGR Sbjct: 537 SMSLIERDRAAAFFADKETGSQILICSEIGSEGRNFQFSHHLVLFDLPLNPDLLEQRIGR 596 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS 656 LDRIGQ IQIHVPYLE +A +V+ WYHEGL+AFE TCP G+T++ V LI L Sbjct: 597 LDRIGQTETIQIHVPYLENSALAVMFHWYHEGLNAFEKTCPAGQTVFVKVEEQLIAALHQ 656 Query: 657 -PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 Q + L+ + H L L+ GRD+LLE +S A+ L ++ QD+D L Sbjct: 657 RQTQDKALAGLVGVTQTTHRELNEALDCGRDKLLEYNSFRPGVAEQLMQAARTQDNDPAL 716 Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQ 775 + + +FD G++ ++ + PS+HM +P FPGL ++G IT+ R+VALA ED Sbjct: 717 LQYMETVFDCCGVHIEEHRAGSYLTEPSEHMSMP-FPGLQDEGSVITYMRDVALANEDMH 775 Query: 776 FITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRF 835 F+TWEHP++ + ++ ILS ++G++ + LK++ + GTLL+E ++V+EA Q NR+ Sbjct: 776 FLTWEHPMVTHAIERILSNESGNAVVVALKHQQVQPGTLLLETLFVLEASGQHVQQSNRY 835 Query: 836 LPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQI 895 LPP +R++LD+ G+ ++ + N+ + V +++ + + +L++ E Sbjct: 836 LPPAVIRIVLDEQGSGDYPHLDHDAINQHVQPVAPGIAKQVMQLKEGAIRELLRVSEQHA 895 Query: 896 EKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGW 955 A LI AA + E+ RL+AL+ VNPN+RD+E+ E QQ+ +L + Sbjct: 896 GAQAPQLIAAAEARIRQTFIPEIERLKALQQVNPNVRDEEVQFFEQQLQQLTGALKSSNL 955 Query: 956 RLDALRLIVVT 966 LDA+R+IV T Sbjct: 956 GLDAVRVIVAT 966 >UniRef50_B3PHI1 RNA polymerase-associated protein HepA n=2 Tax=Gammaproteobacteria RepID=B3PHI1_CELJU Length = 977 Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/988 (45%), Positives = 614/988 (62%), Gaps = 42/988 (4%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F +GQRWIS+ E +LGLG V+ V R +TL FP+ GE R YA ++PV+RV + G+T+ Sbjct: 6 FVIGQRWISEAEVDLGLGIVLDVANRRLTLSFPAAGERRTYALDNAPVSRVKYEVGETVR 65 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 DG ++++ ++ E+ G L Y+G D EE A+ E LDS + FS P++RLFAGQID+ Sbjct: 66 HQDGTRIKITKIVEQAGCLMYVGLTKDQEE--FAIPEFELDSFVQFSTPRERLFAGQIDK 123 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 + F LRY+ Y + PY GL G R L+PHQL IA +V +RHAPRVLLADEVGLG Sbjct: 124 HEHFFLRYQTLHYQHQHRHSPYFGLAGPRVQLLPHQLYIAGEVAQRHAPRVLLADEVGLG 183 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY------- 235 KTIEAG++LHQQLLSG +R LI+VP +LQHQWLVEMLRRFNL F L D+ R Sbjct: 184 KTIEAGLVLHQQLLSGRIKRALIVVPASLQHQWLVEMLRRFNLSFTLLDEARCNALVGLD 243 Query: 236 ---------------AEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVD 280 E + ++ NPF++ QLV+CSLDF + R + A WDLL+VD Sbjct: 244 SQEESVDYVDDFEDDTEHRANSENPFESAQLVLCSLDFLTDNPVRYQQAVAAGWDLLLVD 303 Query: 281 EAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFA 340 EAHHL WS S Y IE LA G+LLLTATPEQLG+ESHFARLRLLDP+R++D Sbjct: 304 EAHHLQWSPGHVSAAYACIEGLARVARGLLLLTATPEQLGLESHFARLRLLDPDRYYDLD 363 Query: 341 QFVEEQKNYRPVADAVAMLLAGNKLSNDELN--MLGEMIGEQDIEPLLQAANSDSEDA-Q 397 F EQ++Y+P+ D V LL L+ +G + G + L+Q + D+ Sbjct: 364 AFKAEQQSYKPLNDLVQDLLQARDADAGTLSDSQVGALKGYLPVGTLVQLKQQIASDSFA 423 Query: 398 SARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGAR 457 SA ++ L+DRHGT RVLFRNTRN V GFP R+LH L L Q + + Sbjct: 424 SAVDTAITCLLDRHGTGRVLFRNTRNSVSGFPGRQLHGYALDLGDDEQAFVDQPLV---- 479 Query: 458 KSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATAL 517 A+ RA + + A WW D RV WL +L ++ +KVLVICA A TA Sbjct: 480 --AQIRAETFWHSK--------TQADWWLQDGRVTWLADWLKQNKRKKVLVICASADTAQ 529 Query: 518 QLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH 577 LE+ LR R+GI +VFHE MS+IERDR+AA+FA+ + GAQVL+CSEIGSEGRNFQFA Sbjct: 530 TLEEYLRLRKGILTSVFHEHMSLIERDRSAAYFADLEEGAQVLICSEIGSEGRNFQFAQD 589 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP 637 +V+FDLP NPDLLEQRIGRLDRIGQ + IHVP+ TAQ+ L+ WYH+GL+AFE TC Sbjct: 590 LVLFDLPINPDLLEQRIGRLDRIGQTGTVNIHVPFFRGTAQARLLDWYHQGLNAFEKTCA 649 Query: 638 TGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGE 697 G+ +Y ++L+ L + + F+ L+ R +AL QL+QGRDRLLE++S + Sbjct: 650 IGQAVYSRFADELLPALVG-QEPQVFEALLSTTRAHAQALLEQLQQGRDRLLELNSCKPQ 708 Query: 698 KAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSED 757 +AQ L +++ + D L + ++FD GI+ D ++ +VL PSDHM + FPGL E Sbjct: 709 QAQQLVDALADNDQHPALANYMESVFDCFGIDMDRHSEHSLVLHPSDHMRIEQFPGLPES 768 Query: 758 GITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVE 817 G+TIT+ R+ AL+RED QF+TWEHPL+R DLI+ + G++ LK L G LLVE Sbjct: 769 GLTITYQRQQALSREDMQFLTWEHPLVRGAQDLIVLSEFGNTAFCTLKLPPLKPGNLLVE 828 Query: 818 LIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLV 877 ++V+ AP +LQL+RF+P + +R+LLD G +L+A + +R + V R+ +LV Sbjct: 829 ALFVLHCPAPAELQLSRFIPQSVIRVLLDDKGKDLSAVLNVAQLSRLVQKVPRNNAQELV 888 Query: 878 NAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELT 937 + + I+ E + + LI+ A+ L+ E+ RL+AL VNPN+R +E+ Sbjct: 889 RHARPQLTEIIHKAEQVTQANQAGLIENAKAAVATHLNTEIDRLKALAEVNPNVRQEEIQ 948 Query: 938 AIESNRQQVMESLDQAGWRLDALRLIVV 965 ++ L A RLD+LR+++ Sbjct: 949 YLQERLAASQHFLGLAKVRLDSLRVVMT 976 >UniRef50_B7RWY5 Type III restriction enzyme, res subunit family n=3 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RWY5_9GAMM Length = 920 Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/966 (45%), Positives = 603/966 (62%), Gaps = 46/966 (4%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M + +GQRW+S +++LGLG VV V+ R +TL FP+ GE R YA ++P+TR+ F GD Sbjct: 1 MEYLVGQRWVSHADAQLGLGIVVDVEPRRITLSFPAVGEERTYASENAPLTRLRFKEGDH 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I++ +G ++ V + E +GLL Y GT D + + + E+ LD+ + + PQ RL G Sbjct: 61 ISTVEGVELTVSAINEHHGLLMYTGT--DHHDQQLVVSELELDAFVQLTTPQQRLLNGHF 118 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D+ FALR ++++ GL G RTSL+ HQL IA++VG+RHAPRVLLADEVG Sbjct: 119 DKNQDFALRVATLQHTNRLQGSAARGLMGSRTSLLHHQLYIANEVGQRHAPRVLLADEVG 178 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMI+HQQLL+G A R LI+VP +L HQWLVEMLRRFNL F+LFD +R AE Sbjct: 179 LGKTIEAGMIIHQQLLTGRATRALILVPPSLLHQWLVEMLRRFNLHFSLFDADRLAEMSE 238 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 NPF+ EQLV+CSLD + + A WDL+VVDEAHHL WSED +Y +E Sbjct: 239 G--NPFEAEQLVLCSLDMFEGRDELQQMALAAGWDLVVVDEAHHLHWSEDEAGEDYGFVE 296 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 L+ G+LLLTATPEQ+G SHFARLRLLDP+RFHD F EE+ +R +++ L Sbjct: 297 ALSTCSAGLLLLTATPEQIGQASHFARLRLLDPSRFHDLESFREEETQFRALSEMTDALD 356 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN 420 G SN ++ DA +L+ L+DRHGT RVLFRN Sbjct: 357 RGEMPSNLPEDL----------------------DASQPPAQLIEQLLDRHGTGRVLFRN 394 Query: 421 TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD 480 TR V+GFP+R LH LP P QY+ A+ + ER++ E Sbjct: 395 TRAAVEGFPQRHLHRYPLPQPEQYEHAV------------------VELEERLHPELPYF 436 Query: 481 NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI 540 + +W +FDPRV+WL L + R +KVL+ICA A+TA+ LE L R GIR+A F+E +SI Sbjct: 437 DDSWLDFDPRVDWLETTLKALRPEKVLIICAHASTAVALEHHLHMRAGIRSAAFYEALSI 496 Query: 541 IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI 600 IERDRAAA+FA+E GAQ L+CSEIGSEGRNFQFA H+++FDLP NPDLLEQRIGRLDRI Sbjct: 497 IERDRAAAYFADETGGAQTLVCSEIGSEGRNFQFAHHLILFDLPLNPDLLEQRIGRLDRI 556 Query: 601 GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT 660 GQ HD++IHVPYL+ +AQ L+ WY GLD F +C G I+ + L+ L +T Sbjct: 557 GQDHDVEIHVPYLQGSAQETLLDWYDRGLDLFRDSCSAGYMIFQNFQQRLLPQLEQ--RT 614 Query: 661 EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 FD+L+ + E + +L +GRDRLLE +S E A+ L E IE + L + Sbjct: 615 AAFDELLTDSAEFTLRTRDELREGRDRLLERNSCKREVAETLIEEIESLESGDTLENYLE 674 Query: 721 NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE 780 L + G++Q+ ++ ++L PS+HML FP + E+G T+TF RE L+RED +F+TWE Sbjct: 675 ALCEAFGVDQEFHSEHTLILRPSEHMLTGHFPYVGEEGTTVTFSREKGLSREDMEFVTWE 734 Query: 781 HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP 840 HP+I+ ++++ S + G++ I LK K +P GT+L+E ++ + APK LQ+ RFLP +P Sbjct: 735 HPMIQEAMEMVYSTELGNAAIGTLKLKGVPAGTMLLEAVFTINCVAPKALQVERFLPLSP 794 Query: 841 VRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR 900 +R+L+D G LA V E N + V + T ++ V ++V A + L AQ E + Sbjct: 795 IRLLVDARGKQLAELVPHERLNALVEKVKKATALAIIKQVHKEVDAKMSLANAQAEAKLK 854 Query: 901 ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL 960 A++ A + L AEL+RLEALR +NP IR++EL + ++ + A +L AL Sbjct: 855 AVLTEAEDRMRNDLGAELARLEALRQLNPAIREEELEHLRYRIEECAIHIQHASLQLQAL 914 Query: 961 RLIVVT 966 RL++ T Sbjct: 915 RLVITT 920 >UniRef50_Q2SC88 Superfamily II DNA/RNA helicase, SNF2 family n=2 Tax=Gammaproteobacteria RepID=Q2SC88_HAHCH Length = 967 Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/978 (45%), Positives = 601/978 (61%), Gaps = 33/978 (3%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F +GQRWIS+TE ELGLG + D R +T+ FP+ E R Y+ +++P++RV + GD ++ Sbjct: 9 FVIGQRWISNTEPELGLGIITENDNRRITISFPAATEQRTYSAANAPLSRVQYQVGDNVS 68 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 +D + V V E+ G L Y LD + V L E+ L S + F P+DRLF+GQ+D+ Sbjct: 69 DNDEKKYTVAGVIEQQGYLIYEA--LDEKGRKVDLPELELSSFVHFVSPKDRLFSGQVDK 126 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 + + LR Y + Q GL G R L+PHQ+ IA++V RHAPRVLLADEVGLG Sbjct: 127 LSSYLLRQETLGYQTRQQATQGYGLMGARVQLLPHQMYIANEVAHRHAPRVLLADEVGLG 186 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY-AEAQHD 241 KTIEAG+ILH QLLSG A+RVLI+VPE+L HQWLVEMLRRFNL+F++ D+ER A + Sbjct: 187 KTIEAGLILHHQLLSGRAQRVLIVVPESLLHQWLVEMLRRFNLQFSILDNERCEALTESG 246 Query: 242 AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 NPF+ QLV+CSL+F + Q EH A+WD+LVVDEAHHL WS + S Y IE Sbjct: 247 EENPFECSQLVLCSLNFITDNDQWREHALNAQWDMLVVDEAHHLEWSPEQQSPAYSHIEA 306 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLA 361 LA+ PG+LLLTATPEQLG+ESHFARLRLLDP R+HD +F EE+ Y+PV D V LL Sbjct: 307 LAQKAPGLLLLTATPEQLGLESHFARLRLLDPARYHDLERFREEESQYQPVNDLVKELLG 366 Query: 362 GNKL-----SNDELNMLGEMIGEQDIEPLLQAANSDSEDA-QSARQEL-------VSMLM 408 + S D L + +G+ ++ LL N + DA + +R+E V L+ Sbjct: 367 ESGPTRLLDSQDLQAKLADYLGQDAVDKLLAELNQFAVDADEDSREEALHRVERAVRKLL 426 Query: 409 DRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDML 468 D+HG RVLFRNTR+ +KGFP+R LH LP P + T + A S E R L Sbjct: 427 DQHGVGRVLFRNTRSAIKGFPQRILHLHPLPQPEELAT-------LSASASLEQR----L 475 Query: 469 YPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG 528 +PER+ A W D RVEWL +L +R +KVLVICA A TAL LE LR R G Sbjct: 476 HPERLL------GAEWVKTDSRVEWLAQWLKQNRQEKVLVICAHAETALDLEDFLRLRGG 529 Query: 529 IRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPD 588 R AVFHEG+S++ERDRA A+FA+++ GAQ L+CSEIGSEGRNFQFA H+V+FDLP NPD Sbjct: 530 YRTAVFHEGLSLLERDRAGAYFADDEYGAQALICSEIGSEGRNFQFARHLVLFDLPQNPD 589 Query: 589 LLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYN 648 LLEQRIGRLDRIGQ HD+ IHVP+ E +AQ L+RW++EG++AF CP G IY Sbjct: 590 LLEQRIGRLDRIGQRHDVNIHVPFFENSAQERLLRWHNEGINAFSRPCPAGAAIYQRFAV 649 Query: 649 DLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEE 708 L + L D + F+ LI + + E L+QGRD LLE++S KA L E I E Sbjct: 650 RLESELEQTDDRDEFNQLIADTHQFTEETLQALQQGRDPLLELNSCDPLKANDLVEQIVE 709 Query: 709 QDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVA 768 + L + +F G++Q+ + + P DHM FPGL EDG+T TF R++A Sbjct: 710 DERRKELEDYIERVFSQYGVDQEQHSERAYIFRPGDHMQCSHFPGLPEDGVTATFHRDLA 769 Query: 769 LAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPK 828 L+R+D QF+TWEHP++ LD+IL G+ G++ + +K L G L+VE I+ + APK Sbjct: 770 LSRDDMQFLTWEHPIVTGALDMILCGEFGNTGLCTIKLPPLQPGALMVETIFRLNCPAPK 829 Query: 829 QLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAIL 888 LQL RFLP PVR+L+D +G L + + V + T LV + + ++ Sbjct: 830 ALQLYRFLPKEPVRLLIDSSGKELGQILTAAHLQQLGENVPKRTAQDLVRHARAQIEPLI 889 Query: 889 QLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVME 948 E L++ + E E+ RL+AL VNPNIR DE+ + + + + Sbjct: 890 TKAEKTAAAQKSELVERSIATMLESQQTEIERLKALAEVNPNIRQDEIDFLIQQTETLEK 949 Query: 949 SLDQAGWRLDALRLIVVT 966 L A LDA+R+++ T Sbjct: 950 YLKGAQLTLDAVRVVIAT 967 >UniRef50_Q5ZT66 ATP-dependent RNA helicase n=9 Tax=Gammaproteobacteria RepID=Q5ZT66_LEGPH Length = 958 Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/988 (42%), Positives = 626/988 (63%), Gaps = 57/988 (5%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F +GQRWIS+TES+LGLG + VD R V++ FP+ GE+R+YA ++P++R+++ G+ Sbjct: 1 MTFRIGQRWISNTESQLGLGIITEVDGRQVSISFPAAGEDRIYAIDNAPLSRIVYKTGEE 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I ++D +++V ++E++G+L Y G D + + E+ L+ + + PQ RLF+G + Sbjct: 61 ILTNDQQRIKVTSIQEQDGVLLYTGN--DDLGNVAQVSELALNCFIKLNSPQQRLFSGLL 118 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D+++ F LR + ++ + GL G RT+ + HQ+ IA++V +R APRV+LADEVG Sbjct: 119 DKLNAFKLRIKTLEHLGRLQQSKARGLLGSRTNHLIHQIYIAYEVAQRFAPRVMLADEVG 178 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY----- 235 LGKTIEAGMILH QL +G A RVLIIVP +L HQW VEMLRRFNL F++ +Y Sbjct: 179 LGKTIEAGMILHYQLHTGRASRVLIIVPNSLIHQWFVEMLRRFNLHFSIIGPNQYDAMPS 238 Query: 236 -----------AEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHH 284 E + N F+ EQLV+ SLDF ++ + A+WDLLVVDEAHH Sbjct: 239 TLDELEDNDNPIEPASEDGNLFEGEQLVLTSLDFLMENETARQQALAAQWDLLVVDEAHH 298 Query: 285 LVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVE 344 L WSED+ S EY IE+L+ G+LLLTATPEQ+GM+SHFARLRLLDP RF+DF+ FV Sbjct: 299 LYWSEDSQSPEYTFIEKLSARSTGLLLLTATPEQVGMKSHFARLRLLDPARFYDFSAFVN 358 Query: 345 EQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD--SEDAQSARQE 402 E+K Y + NK+ D ++ E G ++ P L + ++A + Sbjct: 359 EEKQYHEI----------NKIVQDLMDY-KEKNGVDELNPQLHSHLKQLLGKEAPAGINA 407 Query: 403 LVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAED 462 + L+DR GT RVLFRNTR +KGFP+R +H + L P Y I+ S ++ Sbjct: 408 TIKELLDRFGTGRVLFRNTRAAIKGFPERRIHPVALTCPALYSEIIRESNLI-------- 459 Query: 463 RARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQV 522 LYPE + +N +W DPRV+WL+ + R +K+LVICAKA TA+ LEQ Sbjct: 460 ----HLYPETLL-----NNDSWIEHDPRVQWLVNKINELRPEKILVICAKAKTAISLEQY 510 Query: 523 LREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFD 582 L+ R GIR+ +FHEG++IIERDRAAA+FAE++ GAQVL+CSEIGSEGRNFQF+ H+V+FD Sbjct: 511 LKLRTGIRSTLFHEGLTIIERDRAAAYFAEQENGAQVLVCSEIGSEGRNFQFSHHLVLFD 570 Query: 583 LPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI 642 LP NPDLLEQRIGRLDRIGQ H I+IHVPYL TAQ L RWYHEG++ + +C G +I Sbjct: 571 LPLNPDLLEQRIGRLDRIGQNHPIEIHVPYLAGTAQEKLFRWYHEGINILQQSCSVGFSI 630 Query: 643 YDSVYNDLINYLASPDQ---TEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKA 699 ++ N L L+SP Q + + LI + + + +K L GRDRLLE++S Sbjct: 631 FEVFENRLTPVLSSPLQDISEQSLEKLIADTQLHTQHIKEALNAGRDRLLELNSCNYTIG 690 Query: 700 QALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGI 759 + L E+IE +++ L + ++ GI+Q+ +N +L P +HM FPGL EDG+ Sbjct: 691 KELIEAIEAEENCLELENYMSQVYQEYGIDQEYHSENAEILRPGNHMKTAHFPGLKEDGM 750 Query: 760 TITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELI 819 T+T+ R AL RED +F++WEHP++ + +++IL + G++T++ + K++ GTL +E Sbjct: 751 TVTYSRSKALVREDMEFLSWEHPMVYDTMEMILESELGNATVTTISIKSIKPGTLFLETF 810 Query: 820 YVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNA 879 Y + + APK LQL+RF+P P+R+L+D G NL+ + +E N + RH G ++ Sbjct: 811 YTINSSAPKYLQLDRFIPSLPIRILMDTTGKNLSGILSYEQLNNLCQPLKRHLGYPVIKQ 870 Query: 880 VQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAI 939 V++++ +ILQ E + I+ A++ + S E++RLE+L+ +NP IRD+E I Sbjct: 871 VREEIESILQQTNKIAEDQMKLFIEEAKSTMELTTSQEVNRLESLQKINPAIRDEE---I 927 Query: 940 ESNRQQVMES---LDQAGWRLDALRLIV 964 E ++++ ES ++ + +L A+R+++ Sbjct: 928 EFFKKKISESNYFINSSTLKLQAIRVVI 955 >UniRef50_C5SAQ5 Helicase domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SAQ5_CHRVI Length = 928 Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/964 (46%), Positives = 582/964 (60%), Gaps = 41/964 (4%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRW+S+T++ELGLG V AVD R V + +P+TGE RLYARS++P+ R++ G+ I Sbjct: 4 FVPGQRWLSETQTELGLGLVEAVDGRHVRIAYPATGETRLYARSEAPLARLVVERGERIR 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 G +++V E + E+GL+ Y G D E L E LD +L F++P RL A ++D Sbjct: 64 DRAGRELRVIEARVEHGLIIYRGE--DAEGQLRELPEPELDDRLSFNRPGQRLLAARLDS 121 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 F LR+R + P GL G R +LIPHQL+IA +V RR APRVLLADEVGLG Sbjct: 122 DHWFRLRHRTWTQGMREAGSPTLGLVGARVALIPHQLHIAAEVSRREAPRVLLADEVGLG 181 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTIEAG+ILH+ L+G+A RVLI+ PE L HQWLVEM RRFNL ALFD ER+ + D Sbjct: 182 KTIEAGLILHRMRLTGSARRVLILTPEPLLHQWLVEMRRRFNLALALFDQERFESIRDD- 240 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 NPF +EQ V+C L+ + EAEWDLL+VDEAHHL WSE PS Y+ +E L Sbjct: 241 -NPFLSEQCVLCGLELLVAQAGAGRAVLEAEWDLLIVDEAHHLTWSETDPSPAYRLVEAL 299 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 A +P VLLLTATPEQLG HF RLRLLDP RFHD A F +E+ Y P+A A LL Sbjct: 300 ASRIPSVLLLTATPEQLGRAGHFGRLRLLDPARFHDPAAFQDEEARYAPIAALAARLLDD 359 Query: 363 NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR 422 L + + L ++GE D D R+ L+ L+DRHGT RVLFRNTR Sbjct: 360 EPLDDADRARLESLLGE-----------CDGLD----RETLIERLIDRHGTGRVLFRNTR 404 Query: 423 NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNA 482 + GFP+REL LP P Y+T + + AR L PE + + Sbjct: 405 ATIPGFPRRELIAHPLPEPDAYRTVPDLDPL----------AR--LTPECAH------GS 446 Query: 483 TWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 W + DPR++WL+ L R KVL+ICA+A T L+L + LR+R GI AAVFHEGM I+E Sbjct: 447 GWESVDPRLDWLIATLRDLRPAKVLLICAQAHTVLELREALRQRAGIHAAVFHEGMEIVE 506 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 RDRAAA+FA + G Q+LLCSEIGSEGRNFQFA H+++FDLP PDLLEQRIGRLDRIGQ Sbjct: 507 RDRAAAYFASVEDGTQILLCSEIGSEGRNFQFAHHLILFDLPLEPDLLEQRIGRLDRIGQ 566 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG 662 A I++HVPYL +L RWY EGL AFE CP +++ + L + LA P Q E Sbjct: 567 AQTIRLHVPYLSGGPMEILFRWYAEGLGAFEQLCPAAAAVHERLGGRLRDALADPAQAEA 626 Query: 663 FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNL 722 LI R L +L GRDRLLE+HS+ + AL ESI D + ++ + + Sbjct: 627 ---LIAETRMLASQLNGELAAGRDRLLELHSHRLTRDAALVESIAASDAERSVADYLSDF 683 Query: 723 FDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHP 782 +D G+ + +V+ P ML FP L EDG+T TFDR ALA ED F+TWEHP Sbjct: 684 WDAFGVEHEPGPGGSVVVRPGPQMLQETFPRLPEDGLTATFDRAQALANEDRAFLTWEHP 743 Query: 783 LIRNGLDLILSGDTGSSTISLLKNKA-LPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPV 841 + R ++L+ + + GS+ + L++ A P TLL+E++YV E AP +LQ+ FLPPT V Sbjct: 744 MTREAMELLTASELGSAALILIQGDARFPRATLLLEILYVAECPAPPELQVEHFLPPTLV 803 Query: 842 RMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARA 901 R+LLD G + A ++ E+ + N L+ + + L+ GE + + Sbjct: 804 RLLLDAEGRDRAGEIAHESLRGDCLSHNGTLARALIASQASRLAERLEQGEELAHGALKD 863 Query: 902 LIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALR 961 L AR + L EL RL AL AVNP +R DE+ + R+++ L QA RLDALR Sbjct: 864 LEQEARARMHQVLGDELERLLALAAVNPAVRPDEIARLRHRRERLDVLLGQAHLRLDALR 923 Query: 962 LIVV 965 LI+ Sbjct: 924 LIIA 927 >UniRef50_A4A3Z1 RNA polymerase associated protein rapA n=1 Tax=Congregibacter litoralis KT71 RepID=A4A3Z1_9GAMM Length = 916 Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/972 (44%), Positives = 581/972 (59%), Gaps = 67/972 (6%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M + +GQRW+S +SELGLG VV +D R V++ FP+ E R YA ++P+TRV GD Sbjct: 4 MSYAIGQRWLSHADSELGLGIVVELDGRRVSVHFPAVEEERTYATDNAPLTRVKLREGDA 63 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVF----LDSKLVFSKPQDRLF 116 + + DG ++QV V EE LL Y E +G RE+ LD + + P+ RL Sbjct: 64 LHTRDGRKLQVLAVHEEQELLIY-------EVAGEGQRELLAELDLDDHIDLATPRQRLL 116 Query: 117 AGQIDRMDRFALRYRARKYSSEQFRMPYSGLRG---QRTSLIPHQLNIAHDVGRRHAPRV 173 A Q D FALR ++ R+ SGLRG RT+L+PHQL +A++VG+RHAPRV Sbjct: 117 ASQYDGHAAFALRMATAEHLH---RLQQSGLRGLLGTRTALLPHQLYVANEVGKRHAPRV 173 Query: 174 LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDE 233 LLADEVGLGKTIEAGMILH+QLLSG + RVLI+VP +LQ QWLVEM RRFNL+FALFDD+ Sbjct: 174 LLADEVGLGKTIEAGMILHRQLLSGDSRRVLIMVPASLQFQWLVEMRRRFNLQFALFDDD 233 Query: 234 RYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPS 293 R E+ + NPF+ EQLV+CS D R L +AEWD+L+VDE H L W D+ S Sbjct: 234 RLMES-GEGSNPFEDEQLVLCSTDLFLDPTARALAL-DAEWDMLIVDEVHRLAWHRDSVS 291 Query: 294 REYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVA 353 E++ +E +A +PG+LLLTATPEQ+G+E+HFARL LLDP RFHDFA F EE+ Y+ + Sbjct: 292 DEFRFLESMAAQIPGLLLLTATPEQVGLEAHFARLALLDPERFHDFAAFEEEESQYKRWS 351 Query: 354 DAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGT 413 L G K DI+P ++A + V+ L+DR+GT Sbjct: 352 SLTDALDRGEKPQG----------LPADIDP------------EAAPERQVAALLDRYGT 389 Query: 414 SRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERI 473 RVLFRN R V GFP RE+ LP A D + + Sbjct: 390 GRVLFRNARASVGGFPTREMQPHPLP------------------------AVDSPVYQHL 425 Query: 474 YQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAV 533 Y + D W DPRV WL+ L + R +KVLVICAKA TAL LE L+ R GIR+A Sbjct: 426 YPDLHVDTEQWLQEDPRVAWLVSQLKALRPEKVLVICAKADTALALESYLQLRAGIRSAA 485 Query: 534 FHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQR 593 FHE +S++ERDRAAA+FAE++ GAQ L+CSEIG EGRNFQFA H+++FDLP +PD LEQR Sbjct: 486 FHEQLSLVERDRAAAYFAEQEQGAQALICSEIGGEGRNFQFAQHLILFDLPEHPDQLEQR 545 Query: 594 IGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINY 653 IGRLDRIGQ I IHVPY+E +AQ L+RWYHEG+D F +C G I L Sbjct: 546 IGRLDRIGQKERIFIHVPYIEGSAQETLMRWYHEGIDLFRSSCSAGDMILGEFKESLEEQ 605 Query: 654 LASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDT 713 L +Q F+ L+++ + E + +L +GRD+LLE S E+ QAL +I + +D Sbjct: 606 LR--EQNGAFEALLRDTADFTERARKELSEGRDKLLERSSCNAEQGQALGTAISDIEDPD 663 Query: 714 NLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALARED 773 L AF L D+ G+ +D GD+ VL + L+ FP + EDG T+T R+ ALARED Sbjct: 664 TLGAFLRELCDVTGVEHEDLGDSSSVLRRGEQELLEIFPEVPEDGCTVTVSRDEALARED 723 Query: 774 AQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLN 833 F+ WEHP + N + +L G +++ +K K +P G+ L EL++ V AP+ L L Sbjct: 724 WIFLGWEHPWMENAMTTVLGSALGQASVGAMKLKGVPGGSRLYELLFTVSLSAPRALGLQ 783 Query: 834 RFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEA 893 R+LP P R+LLD +G +L+ + E N ++ V R T SK+V +++++ + EA Sbjct: 784 RYLPLAPQRILLDASGRDLSKLLTHERLNERVEKVPRGTVSKIVRQLREEIETRIDDAEA 843 Query: 894 QIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQA 953 Q A E++ E++RL ALRAVNP IR++E+ + ++ + +L A Sbjct: 844 QFAGELETRQKEAAQRYGEQMDEEIARLSALRAVNPAIREEEIENLRLRKEAGLVALGTA 903 Query: 954 GWRLDALRLIVV 965 L +RL++ Sbjct: 904 RSTLQGVRLVIT 915 >UniRef50_C0N229 Type III restriction enzyme, res subunit family n=2 Tax=Gammaproteobacteria RepID=C0N229_9GAMM Length = 948 Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/965 (42%), Positives = 587/965 (60%), Gaps = 26/965 (2%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F +GQRW+S++E+ELGLG + + R + + FP+T E R YA +++P++RV+++ G+ + Sbjct: 6 FVVGQRWVSNSEAELGLGIIKQLSGRQIEVFFPATEETRFYAANNAPLSRVIYSVGEQVK 65 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 + + + V+E NG Y G D + +++ E+ LDS++ F+KPQDRLFAGQ+D+ Sbjct: 66 TREQQSFTISTVQEFNGNYIYQGDSSDGD--AISIHEMDLDSRVHFNKPQDRLFAGQVDK 123 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 +F LR + + GL G R +PHQL IA +V +R APRVLLADEVGLG Sbjct: 124 NSKFELRAKTLAHQHSLLSSSVYGLLGGRVQFLPHQLYIARNVTQRFAPRVLLADEVGLG 183 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY-AEAQHD 241 KTIEAG+ILH+Q+L+G R LI+VP+ L HQWLVEMLRRFNLRF L D +R+ A + D Sbjct: 184 KTIEAGLILHRQVLTGQVRRALIVVPDALLHQWLVEMLRRFNLRFTLIDKDRHEALTEQD 243 Query: 242 AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 NPFD+ QLV+C L + A+WD+++VDEAHHL W E S EY IE Sbjct: 244 EGNPFDSAQLVLCGLSELIAHPDMQADVTAADWDMMIVDEAHHLYWQEGNVSDEYALIET 303 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLA 361 LA +P +LLLTATPEQLG++SHFARLRLLDP+RFHD A F ++++ Y+PV++ + +L A Sbjct: 304 LAAQIPSLLLLTATPEQLGIDSHFARLRLLDPDRFHDLAAFKQQEEAYQPVSELIDLLDA 363 Query: 362 GNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT 421 L + + + E LL + + A Q + L+DRHGT RVLFRNT Sbjct: 364 DTALEQVQKPATQKQLAEYLDADLLAQLLVE-DTFLDASQIAIRQLLDRHGTGRVLFRNT 422 Query: 422 RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDN 481 R+ V GFP+R LH L LP QT+ + +L PE + GD Sbjct: 423 RDVVAGFPERVLHPYPLTLPEALQTSDE----------------PVLLPENLL----GD- 461 Query: 482 ATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSII 541 W D RV+WL+ +L +HR KVL+ICA+A TA+ LE +LR G+R+AVFHE MS++ Sbjct: 462 -AWLQTDERVQWLVDFLKAHRQDKVLIICAQADTAMDLETLLRLHHGVRSAVFHEDMSLV 520 Query: 542 ERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 RDRAAA+FAEE+ GAQ L+CSEIGSEGRNFQF +V+FDLP NPDLLEQRIGRLDRIG Sbjct: 521 NRDRAAAFFAEEEEGAQCLVCSEIGSEGRNFQFCHQLVLFDLPNNPDLLEQRIGRLDRIG 580 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 Q H + IHVP+ EK+AQ VL WYH+G++AFE G+ + L L + + Sbjct: 581 QHHAVNIHVPFYEKSAQQVLFNWYHQGMNAFERVFAAGQVVSAQTDVLLQRCLQDSNDKK 640 Query: 662 GFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 +LI++ +E A ++ GR+RLLE +S + A + +E+ L + + Sbjct: 641 AQSELIESTQEIVATTLAAMQSGRNRLLERNSFDKQDAGLIVAELEDATRALELADYMDD 700 Query: 722 LFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEH 781 +FD G++Q + I++ P HML FP L EDG+T T+ R AL+RED F++WEH Sbjct: 701 VFDAFGVDQQTHSADSIIVEPGSHMLFEQFPALPEDGLTATYQRHRALSREDMAFLSWEH 760 Query: 782 PLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPV 841 P++ +DL++S D G+S L+ A GTLL+E ++VV + +QLQ NRF+ + + Sbjct: 761 PMVTGAMDLVISSDLGNSAFCTLETSAFNAGTLLLEALFVVNCVSGRQLQTNRFITDSHL 820 Query: 842 RMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARA 901 R+++D+ G V FN+ + R T +L+ + + +++ E + Sbjct: 821 RLVIDERGRQHQESVPDREFNKLAGRIPRATAQELIRHARGQISGLIEHAEKAVVAPQER 880 Query: 902 LIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALR 961 + A + +L AE RL+AL VNP IR E+ + R Q+ +S+ A RLDA+R Sbjct: 881 IRQQALDAMHAELEAEQQRLQALAEVNPTIRQQEIDFLAQRRAQLADSIQSAELRLDAVR 940 Query: 962 LIVVT 966 + +VT Sbjct: 941 VAIVT 945 >UniRef50_Q1R0C7 Helicase-like protein n=4 Tax=Gammaproteobacteria RepID=Q1R0C7_CHRSD Length = 980 Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/991 (44%), Positives = 607/991 (61%), Gaps = 45/991 (4%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRW+SD E+ELGLGT+++ D R+VT+LF ++ E R Y+ +P+TRV+F GD I Sbjct: 4 FIPGQRWVSDGEAELGLGTILSCDFRSVTVLFAASQETRTYSVRQAPLTRVVFGAGDRIE 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLV----FSKPQDRLFAG 118 + DG + V++ KE GLL Y+ D E E F +S+L F + +DRL G Sbjct: 64 AADGRTLTVDDTKEAKGLLIYVVETADGE------YEEFPESRLADSMRFQQARDRLLTG 117 Query: 119 QIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADE 178 Q+DR D F LRYR + + P +GL G R LIPHQL IA +V RRHAPRVLLADE Sbjct: 118 QVDRNDWFELRYRTLHHYHRIAQHPANGLAGPRVDLIPHQLYIADEVSRRHAPRVLLADE 177 Query: 179 VGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEA 238 VGLGKTIEAG+ILH+ L++G AER LI+VP++L HQWLVEMLRRF+L F L D++ ++ Sbjct: 178 VGLGKTIEAGLILHRLLITGRAERALILVPDSLTHQWLVEMLRRFSLHFTLLDEQ---QS 234 Query: 239 QHDAYNPFDTEQLVICSLD--FARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREY 296 QH NPF++ QLV+ S FA +Q C+ WDLL+VDEAHHL WS +A Y Sbjct: 235 QHSTGNPFESAQLVLASQQWLFANPHRQTQAQACD--WDLLIVDEAHHLDWSPEASGPGY 292 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAV 356 +EQLA + GVLLLTATPEQ+G+ SHFARLRLLDP R+ A F E+ Y VA+AV Sbjct: 293 ACVEQLAHAIDGVLLLTATPEQMGLASHFARLRLLDPERYTSLAAFEAEETGYARVAEAV 352 Query: 357 AML--LAGNKLSNDELNMLGEMIGEQDIEPLLQA-ANSDSEDAQ--SARQELVSMLMDRH 411 L L G+ D + G +I + D + LL + +S+D Q SAR++L L+DRH Sbjct: 353 DALERLPGDAADRDSV---GAVIDDADSQALLDTLIDPESDDTQRDSARRQLREQLLDRH 409 Query: 412 GTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAI-KVSGIMGAR-----KSAEDRAR 465 GT RV+FRN+R V GFP+R LH +L P+ Y+ + K+ M + D Sbjct: 410 GTGRVMFRNSRRHVAGFPERHLHVTRLAPPSSYRRELRKLDRDMDYLDDLLITTGLDHPE 469 Query: 466 DMLYPERIYQE----FEGDNA----TWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATAL 517 +LYP+ +Y+ GD A WW DPRV WL+ LT K+LVI TA Sbjct: 470 VLLYPDAMYRAQCDASPGDTALNAEPWWQIDPRVTWLLERLTEVGRDKMLVIAHDRETAS 529 Query: 518 QLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH 577 L + LR G++A VFHEG+++IERDRAAA FA+E+ G QVL+CSEIGSEGRNFQF H Sbjct: 530 DLSEALRVLGGVQAPVFHEGLTLIERDRAAAAFADEEDGCQVLVCSEIGSEGRNFQFCRH 589 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP 637 +VMFDLP +PD LEQRIGRLDRIGQ H I+IHVP E + L+RWY EG+ AF+ Sbjct: 590 LVMFDLPAHPDQLEQRIGRLDRIGQQHAIEIHVPVFEDSPGERLLRWYDEGMRAFDAPHG 649 Query: 638 TGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGE 697 G +YD+ + D + + ++I + R E+ A E GRDRLLE ++ Sbjct: 650 IGSELYDA-FGDSVADALL--DDDALAEVIADTRRFFESRLAAHEAGRDRLLEWNACRPA 706 Query: 698 KAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGL--S 755 +AQA+ E+I E DDD L + D+ G+ D G ++ L HML PGL Sbjct: 707 RAQAITEAIRELDDDPALPRYVDKALDVFGVESRDLGGDIQHLLAGPHML-DGLPGLVKG 765 Query: 756 EDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLL 815 E+G + TFDR+ ALAR+D Q ++WEHPL+R ++ IL G G++ ++LL++ A+P G L+ Sbjct: 766 EEGFSATFDRQRALARDDVQRLSWEHPLVREMMERILDGTLGNTALALLQHPAIPGGRLM 825 Query: 816 VELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSK 875 EL++ AP+ L + RFLPPT VR+LLD++G NL +V F + L V + Sbjct: 826 AELVFRTHCPAPRHLNVGRFLPPTAVRLLLDESGANLTQKVSFGGLAKNLQKVKKAVARD 885 Query: 876 LVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDE 935 L+ + + +L E + E ++I+AA+ + L EL+RL+AL NP +RD E Sbjct: 886 LIKSRHAQLRDLLTRAEDEAENELPSIIEAAQTHMRDTLDTELARLKALARHNPAVRDAE 945 Query: 936 LTAIESNRQQVMESLDQAGWRLDALRLIVVT 966 + A+ R+++ ++D RLDA+R++V Sbjct: 946 IEALAHERRELDTAIDATRLRLDAVRVVVTV 976 >UniRef50_Q0VNA6 RNA polymerase-associated protein HepA n=2 Tax=Alcanivorax RepID=Q0VNA6_ALCBS Length = 969 Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/1001 (43%), Positives = 596/1001 (59%), Gaps = 76/1001 (7%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRW+S++E+ELGLG + +D R VT+ +P+ E R YA++++P++RV F+ GDTI Sbjct: 4 FIPGQRWLSESETELGLGIIKELDYRLVTVEYPAVEEERTYAKNNAPLSRVTFDSGDTIR 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLD-TEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 + D ++ V +V E NGL Y+ D + E + E L L + DRL + Q+ Sbjct: 64 TADEMELVVTDVNELNGLKIYMAHPKDGSPEDIQPVPETNLGHTLRLTAALDRLLSNQLS 123 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 F LR + Q + GLRG R LI HQL IA V R APRVLLADEVGL Sbjct: 124 SNRWFELRIDSLNAHCRQQQSAIKGLRGPRIDLIGHQLYIADQVANRFAPRVLLADEVGL 183 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEAG+ILHQQLL+G A+RVL++VP L HQW VEM+RRFNL F++FD ER Q + Sbjct: 184 GKTIEAGLILHQQLLTGRAKRVLVVVPSPLVHQWFVEMVRRFNLHFSIFDAERLNALQPE 243 Query: 242 AY---------------------------------NPFDTEQLVICSLDFARRSKQRLEH 268 NPF +EQL++CS DF S+ +E Sbjct: 244 TSIKDMLAQIIEEENSPNDGADEAASNLSAASGDDNPFLSEQLILCSTDFL--SECDIEQ 301 Query: 269 LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 L A+WDLLVVDEAHHL WS S +YQ +E +A+ G+LLLTATPEQLG+ESH+ARL Sbjct: 302 LAAADWDLLVVDEAHHLEWSAQQASDDYQRVETIAKQARGLLLLTATPEQLGLESHYARL 361 Query: 329 RLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNK----LSNDELNMLGEMIGEQDIEP 384 RLLDP R+ F EEQ +Y+ VA L +K L + + +L +M DI+ Sbjct: 362 RLLDPERYPSLEAFKEEQAHYQDVAALAGRLHDESKWDEALKQEAVALLPDM----DID- 416 Query: 385 LLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQY 444 +S R+ + + L+DR G RV+FRNTR+ + GFP R +H I L LP +Y Sbjct: 417 ------------ESNREAIQAELLDRSGPGRVMFRNTRHNIAGFPARHVHGIPLTLPDEY 464 Query: 445 QTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ 504 + +++ L+PE ++ + W DPRV WL + HR Sbjct: 465 ------------KYDSDEEIDGHLHPETLFH-----DDRWCTLDPRVTWLENFFKQHRHD 507 Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSE 564 KVLVICA TA L + G+ A+FHE M +IERDRAAA+FA++ GAQ L+CSE Sbjct: 508 KVLVICASKNTATDLHAHCNYKLGMNVAMFHEDMDLIERDRAAAFFADDFDGAQALICSE 567 Query: 565 IGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW 624 IGSEGRNFQFA H+V+ DLP NPDLLEQRIGRLDRIGQ DIQIHVPY E+ AQ VL RW Sbjct: 568 IGSEGRNFQFAHHLVLLDLPLNPDLLEQRIGRLDRIGQTDDIQIHVPYFEQHAQEVLFRW 627 Query: 625 YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQG 684 YHEG++AFEHT P G IY + L L + + L+ + R L LE G Sbjct: 628 YHEGMNAFEHTNPAGHDIYLRSRDALEPLLTGDPEYTAIEALVDDTRAITTELHTLLETG 687 Query: 685 RDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSD 744 RDRLLE+ S GE+A+ L + D+D+ L F +FD G+ Q+D D ++L P Sbjct: 688 RDRLLELSSFDGERAETLISDLIAADEDSPL-PFMQRIFDRYGVEQEDHSDTAVILKPGP 746 Query: 745 HMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLL 804 HM FP L E+G+T+T +R ALAR+D QF+TWEHP++ L+++L+ G + +SLL Sbjct: 747 HMRDA-FPSLPEEGVTMTDNRATALARDDMQFLTWEHPMVTGSLEMMLTEHRGKAAVSLL 805 Query: 805 KNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQ 864 KN + GTLL+E IY V+A APK LQ +RFLP T +R LLD NG N++ + + ++Q Sbjct: 806 KNPKIKAGTLLIEAIYTVDAVAPKHLQADRFLPTTVIRHLLDANGKNISQAISHDGLSQQ 865 Query: 865 LNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEAL 924 + +++ K+V + + + +L+ + + A ++I AA+ + EK + EL+RL+AL Sbjct: 866 CHKMDKPLSRKIVGSQKALLEKLLKADDISASQEAESIITAAQQKMREKQAHELARLKAL 925 Query: 925 RAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVV 965 +A NP +R E+ A+E Q + + LD+A +L+A+R+IV Sbjct: 926 QAKNPAVRHAEIDALEDQTQALEKCLDEARCQLEAVRIIVA 966 >UniRef50_B5JYH0 RNA polymerase-associated protein HepA n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JYH0_9GAMM Length = 915 Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/971 (41%), Positives = 576/971 (59%), Gaps = 66/971 (6%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F+ GQRWIS+ E +LGLG V+ D R+V + F S GE R YA S +P++RV+ G+ + Sbjct: 4 FSPGQRWISEAEPDLGLGLVIEADVRSVRIAFLSCGEERTYAVSSAPLSRVLLREGERVR 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 +GW V++V EE GL Y G R D E VA+ E L + + P+DRLF Q+DR Sbjct: 64 HGEGWHFTVDQVAEEQGLAAYRGHRDDGE--TVAVPETQLAHDIQLNAPRDRLFTNQLDR 121 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 F LRY + + + GL+G R S +PHQL IA +V R +PRVLLADEVGLG Sbjct: 122 HSAFTLRYETLRQRARLEQSDVRGLQGARISPLPHQLYIASEVASRPSPRVLLADEVGLG 181 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTIEAG+ILH Q L+ +R LI+VP+ L QWL+E++RRFNL A FD+ER A+ Sbjct: 182 KTIEAGLILHHQWLTERCQRALIVVPQALVSQWLLELMRRFNLAAAHFDEERCRAAEMAT 241 Query: 243 Y-NPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 NPF +EQLV+CSL+F +R E A WDL V+DEAHHL W+ +A S EYQ +E+ Sbjct: 242 DDNPFVSEQLVVCSLEFLMAEPERAEQALAAHWDLAVIDEAHHLGWTPEAVSPEYQWVER 301 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLA 361 LA G+LLLTATPEQLG HFARLRLLDP RF+D QFV+E+ Y AD V L+ Sbjct: 302 LARQTAGLLLLTATPEQLGRAGHFARLRLLDPARFNDLEQFVQEESRYEAAADGVDWLMQ 361 Query: 362 GNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT 421 G LS ++ L Q + P L + + ++A ARQ+LV LMDRHGT RVLFRNT Sbjct: 362 GEPLSQEQRQTL------QALYPELPSDQALKDEA--ARQQLVRDLMDRHGTGRVLFRNT 413 Query: 422 RNGVKG---FPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 R+ V FP+R LH ++ + ++ E Sbjct: 414 RSHVSDFTHFPRRHLHR-------------------------------YVHSDEVHCE-- 440 Query: 479 GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 +WL+ +L SHR +KVLVIC A A+ LEQ L+ +EGI A FHEGM Sbjct: 441 -------------DWLVEWLKSHR-EKVLVICHSAERAVALEQRLQLKEGILCAAFHEGM 486 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 ++ RDRAAAWF ED GAQ LLCSEIGSEGRNFQFA H+V+ DLP PD+LEQRIGRLD Sbjct: 487 GLLARDRAAAWFG-EDMGAQALLCSEIGSEGRNFQFAHHLVLMDLPDQPDVLEQRIGRLD 545 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQA D+ IHVP +E + ++VL+RWY EGLDAF CP + +S+ + + ++ + Sbjct: 546 RIGQAQDVDIHVPVIEGSREAVLMRWYDEGLDAFSAPCPAASAVRESMNDTIEQAMSHAE 605 Query: 659 QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDD---DTNL 715 D LI+ RE H LK +LE+GRDRLLE S ++AQ L + ++ Q+ + L Sbjct: 606 DGAVLDALIEQTREAHRVLKTKLEKGRDRLLERSSCDIDRAQPLLDCLKAQETPQAEEVL 665 Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQ 775 +++ + D G++ + ++ ++ P DH LS++G ++T+ R+ AL RED Sbjct: 666 LSYLEQVCDNFGVDFEMLDTDVALMRPGDHYR-GGLRDLSDEGRSVTWHRQQALEREDLL 724 Query: 776 FITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRF 835 F+TWEHPL+ + +D + + G++++ L+ LP G LLVE ++ + AP+ L+L R+ Sbjct: 725 FLTWEHPLVTDAMDDVAGSNMGAASVGTLEQSGLPEGQLLVECLFRIHHVAPRSLELGRY 784 Query: 836 LPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQI 895 LPP R+++D ++++ + F +N V R T +++++ + + +L E Sbjct: 785 LPPQLFRIVIDAQQRHISSALPFSKVAMHVNKVPRETAKQVIDSQRSLLEPMLDRAEQIA 844 Query: 896 EKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGW 955 E + I+ + ++L EL RL L+A N ++R DE+ + + E++++A Sbjct: 845 EGALAPAIEKGLQKITQELEPELQRLITLQAHNASVRSDEIDQLGVKVEAAKEAVNEATL 904 Query: 956 RLDALRLIVVT 966 +++ +R++V Sbjct: 905 KMEGVRVLVTV 915 >UniRef50_A0Z260 ATP-dependent helicase HepA n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z260_9GAMM Length = 917 Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/969 (41%), Positives = 579/969 (59%), Gaps = 60/969 (6%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F +GQRW+S + ELGLG VV +D R +TL FP+ GE R YA +P+TR++ GD Sbjct: 4 FAVGQRWVSHADVELGLGIVVELDGRRITLHFPAVGEERTYATDRAPLTRLILESGDRYQ 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 +G + V E E G+L Y+ E+ V+ E+ +D + P+DRL Q+D+ Sbjct: 64 HINGQEYAVLERHESEGILAYLIESAAGEQELVS--ELDIDPHIQLRSPRDRLLNNQLDK 121 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 + F LR+ K + GL G RTSL+ HQ+ IA +VG R APRVLLADEVGLG Sbjct: 122 LLDFQLRFETLKQRAHFSGSAVRGLLGARTSLLSHQVYIASEVGTRIAPRVLLADEVGLG 181 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTIEAG+IL QQL SG A R LI+VP++L HQWLVEMLRRFNL F+LFD +R + + D+ Sbjct: 182 KTIEAGLILSQQLASGRASRALILVPDSLIHQWLVEMLRRFNLAFSLFDSDRLNDLEIDS 241 Query: 243 YNPFDTEQLVICSLDF-ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 F++EQL++C A+ RL L A+WD+++VDEAHHL + IE Sbjct: 242 --AFESEQLILCPFSLVAQNEDARLSAL-SAQWDMVIVDEAHHLSRQNSQEETLSRFIEA 298 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLA 361 LA H G+LLLTATPEQ G+ESHF RLRLLDP+RF D F+ EQ+ + + +L + Sbjct: 299 LAGHCSGLLLLTATPEQAGIESHFDRLRLLDPDRFSDLNTFLAEQEQFSEWNRIIELLQS 358 Query: 362 GNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT 421 G Q+ L + D++ A RQ L+DR+GT RVLFRNT Sbjct: 359 G-----------------QNTVTLPPGIDQDTDSASQIRQ-----LLDRYGTGRVLFRNT 396 Query: 422 RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDN 481 R V GFP R L++ L P Y++A S+E L+PE + E E Sbjct: 397 RASVPGFPNRHLNSYPLEAPELYRSA-----------SSE------LFPEMSFSEPE--- 436 Query: 482 ATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSII 541 W DPRV WL L + R +KVLVI A A TAL LE L R GIR A FHEG++++ Sbjct: 437 --WLEHDPRVAWLESQLRALRPEKVLVIAANATTALALEHQLHLRAGIRCAAFHEGLTLV 494 Query: 542 ERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 ERDRAAA+FA+E GAQ L+CSEIGSEGRNFQFA H++ FDLP NPDLLEQRIGRLDRIG Sbjct: 495 ERDRAAAYFADEHGGAQALICSEIGSEGRNFQFAHHLICFDLPKNPDLLEQRIGRLDRIG 554 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 Q D+ IHVP++ +AQ VL +W+ + L+AF +C G T+ L + LA+P T Sbjct: 555 QTADVSIHVPFIRDSAQQVLFQWHDQALNAFTRSCAVGYTVLQQFLEPLNSALAAP--TS 612 Query: 662 GFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 + L+ N +L+ Q+ +GRDRLLE++S+ + ++ SI+ ++ +++FA Sbjct: 613 PIEKLLANSLALRTSLETQMREGRDRLLELNSHDANRGASIIASIQGEETPEQVLSFAEL 672 Query: 722 LFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEH 781 LFD IG++QD + +L P++ ++ + PGLSEDG + FDRE AL R+D F+T EH Sbjct: 673 LFDRIGVSQDYHTETTHLLKPTEMLITGELPGLSEDGTVVCFDRETALVRDDVSFLTLEH 732 Query: 782 PLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPV 841 PL+R + ++LS + G+S + LK+ +P GT+L+E +Y ++ AP L++ R++ TP+ Sbjct: 733 PLLREAMAVVLSSELGNSALGTLKHPKIPGGTVLLECVYSLDCMAPNYLEMGRYVDQTPL 792 Query: 842 RMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAV----QQDVHAILQLGEAQIEK 897 R ++D + + + NR + + T + ++ + +Q + A L ++++E Sbjct: 793 RFVIDPKCIDRGQTIGHQALNRMIGPITTATAANVMRRIRSLLEQQLKAADALAKSELEL 852 Query: 898 SARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRL 957 R + +E+L AE SRL LR+VNP +RD E++ +E+ + + S++ A Sbjct: 853 RKRQAVQT----INEQLGAEHSRLVYLRSVNPAVRDSEISELEARIAKTLASVNDAQAVS 908 Query: 958 DALRLIVVT 966 ALR+++ T Sbjct: 909 QALRVVIAT 917 >UniRef50_Q5QVN2 Probable ATP-dependent RNA helicase HepA n=2 Tax=Idiomarina RepID=Q5QVN2_IDILO Length = 886 Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/965 (39%), Positives = 564/965 (58%), Gaps = 82/965 (8%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F +GQR++S+TE+ELGLG + + R +T++FP+TGE RLY+ ++P+ R Sbjct: 4 FRVGQRYLSETETELGLGMITQAEGRHLTVMFPATGEVRLYSAQEAPLARYQLQVQQQGK 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 DGW ++E+ E G++TY G R D +ES V + E L ++ + RL AGQ DR Sbjct: 64 HADGWSFTIQELTESQGIVTYHGLRDDNQES-VVVPETQLSHQVDSNPALTRLLAGQADR 122 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 +D + LR A ++ + +GL G RT L+PHQL IA V R+ PRVLLADEVGLG Sbjct: 123 LDMYQLRCEASEHLAHHQASEVAGLLGVRTHLLPHQLYIAKTVADRYHPRVLLADEVGLG 182 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTIEAGMI+ ++L +G ++RVLI+VPE+L HQWLVE+ RRF L F LFDDER +A+ D+ Sbjct: 183 KTIEAGMIIKRRLNTGRSQRVLIVVPESLMHQWLVELRRRFALNFTLFDDERCEQAEADS 242 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 NPF TEQ +I S F S+ E L +AE+DLLV+DEAHHL +AP E+ A++ L Sbjct: 243 ENPFLTEQHIIISSRFMHESRWS-ESLLKAEFDLLVIDEAHHL--QPEAP--EFSAVKNL 297 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 E VPG+LLLTATPEQ G E HF RL+LLDP+RF DFA F +EQ Y+ +A+ + Sbjct: 298 CEAVPGLLLLTATPEQEGAEGHFQRLQLLDPDRFSDFASFQQEQTQYKELAEQAESVTDP 357 Query: 363 NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR 422 +L + L+D+HGT RV+FRN R Sbjct: 358 AELDD---------------------------------------LLDKHGTGRVMFRNRR 378 Query: 423 NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNA 482 + GFP+R H ++L D P+ ++ Sbjct: 379 ADIGGFPERHFHPVEL---------------------------DECEPD--------EDM 403 Query: 483 TWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 WW DPR++WL+ ++ +RS+K L+IC A L L + LR G++AA FHEGM++ E Sbjct: 404 PWWMEDPRIDWLLNHIKQNRSEKALLICKTAEQVLDLSEALRVLAGVQAATFHEGMTLTE 463 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 RDR+AA+FA E+ G+ +LLCSEIGSEGRNFQF +++FDLP NPDLLEQRIGRLDRIGQ Sbjct: 464 RDRSAAFFASEEDGSPILLCSEIGSEGRNFQFVHQLILFDLPSNPDLLEQRIGRLDRIGQ 523 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG 662 +I I++PY + +A+++L+ WY +G++AF GR +YD+ D+ +A +Q Sbjct: 524 QQNIDIYLPYCKGSAEAILLPWYEQGMNAFSQCNAIGRKLYDAFGTDIEQAVA--EQEPL 581 Query: 663 FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNL 722 D+L+K +E HE + +G+D+L +++ E A+ + E I D L F + Sbjct: 582 SDELLKQTKELHETWLERNREGQDKLQALNACRPETAEKIIEQIHSDSDTDTLADFMIAF 641 Query: 723 FDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHP 782 FD G+N + + + P +HM V PGL +DGITITFDR AL ED F++W+HP Sbjct: 642 FDRFGVNNEVLDEERWFIRPGEHMRVGSLPGLPDDGITITFDRVTALNFEDTDFLSWDHP 701 Query: 783 LIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR 842 +++ L+L+ + D GS+ ++ LKN A+P GT +EL + APK L F P +R Sbjct: 702 MVQAALELLTADDFGSTCVAELKNPAIPAGTWFLELDFASIVPAPKAAALQEFCPLQSLR 761 Query: 843 MLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARAL 902 +L + G L+A+V E ++Q + +++ T +++ ++ I+Q G+ Q + + Sbjct: 762 LLFNGQGQELSAKVSRELLDQQSSFIDKKTARQILRQLRDPAQKIIQSGQQQAREWQQKQ 821 Query: 903 IDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRL 962 +D + A + L E +RL LR NP++R E+ AI +Q+ +L+ L A+R+ Sbjct: 822 LDKVKQNALDALQHERTRLLELRKKNPSVRSSEIEAINWREEQITAALESPQLSLQAVRI 881 Query: 963 IVVTH 967 +V H Sbjct: 882 LVNNH 886 >UniRef50_B9XDU2 SNF2-related protein n=1 Tax=bacterium Ellin514 RepID=B9XDU2_9BACT Length = 943 Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/975 (42%), Positives = 572/975 (58%), Gaps = 62/975 (6%) Query: 10 ISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQM 69 +S++E ELGL TVV V +LF +TGE R YA ++P+ RV F GDT+ ++D ++ Sbjct: 1 MSESEPELGLATVVHTGEGRVQVLFSATGETRTYASDNAPLKRVRFRIGDTVKTNDDKEL 60 Query: 70 QVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALR 129 V+EV E+ GLL Y+G A+ E L + L P+DRLFAG+ D F LR Sbjct: 61 TVKEVIEKEGLLLYVG-------QDQAVPEAELSASLSLRGPEDRLFAGRFDEPATFELR 113 Query: 130 YRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGM 189 + + P G G R LIPHQL IA +V R APRV+L+DEVGLGKTIEAG+ Sbjct: 114 RLTLELLHRLRKSPVRGFVGGRIDLIPHQLYIAQEVASRQAPRVMLSDEVGLGKTIEAGL 173 Query: 190 ILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA--EAQHDAYNPFD 247 ILH+ LLS A R+L++VPE+L HQW VEMLRRFN+ +FD+ER A EA NPF Sbjct: 174 ILHRLLLSERANRILVLVPESLVHQWFVEMLRRFNVWLNIFDEERCAAIEAGDPGANPFL 233 Query: 248 TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVP 307 +QLV+ S++F S R A WD+LVVDEAHHL WS++ PSREYQ +E+L+ Sbjct: 234 DDQLVLTSINFLASSPTRSAQAVAAGWDVLVVDEAHHLKWSKENPSREYQIVEELSRQSE 293 Query: 308 GVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSN 367 G+LLLTATPEQLGMESHFARL+LLDP+R HD A F+ E ++Y+P AD LL G K + Sbjct: 294 GLLLLTATPEQLGMESHFARLQLLDPDRHHDLASFLAESRDYKPTADIAEKLLTGKKPTR 353 Query: 368 DELNMLGEMIGEQD--IEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGV 425 ++ LG + E L + ++E A Q L+ L+D HG RVLFRNTR G+ Sbjct: 354 KDITFLGNLFAHNAELKEHLEKVGKGNAE----ASQALLKDLLDMHGPGRVLFRNTRAGM 409 Query: 426 KGFPKRELHTIKL-PLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATW 484 GFPKR H KL P P AE+ + +R+ EF D Sbjct: 410 TGFPKRSAHLAKLDPGP-----------------KAEE------WLDRVSTEFAVDAGEA 446 Query: 485 -------WNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEG 537 DPR+ WL+ L QKVL+IC ++ LR I+ +FHEG Sbjct: 447 NLKASLDLTKDPRILWLVDLLQKLDPQKVLLICRTIEKVEAIDAALRRHVSIKTGIFHEG 506 Query: 538 MSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL 597 +++++RDR AAWFAE D GA++LLCSEIGSEGRNFQFA H+V+FDLP NP+LLEQRIGRL Sbjct: 507 LTLVQRDRNAAWFAEAD-GARLLLCSEIGSEGRNFQFAHHLVLFDLPLNPELLEQRIGRL 565 Query: 598 DRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI---YDSVYNDLINYL 654 DRIGQ DI IHVPYL + Q VL RWYHEGLDAFE G + + +DL Sbjct: 566 DRIGQTKDIHIHVPYLAHSPQEVLARWYHEGLDAFEKNLEGGNELLLRFGRAVHDLALEF 625 Query: 655 ASPDQTEG---FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDD 711 + D++E DL++ + L+ LEQGRDRLLE++S A+ + E I+++D Sbjct: 626 SVADRSEADQELADLLERTADGRRELRQVLEQGRDRLLEMNSFRAPVARQIIELIQKEDR 685 Query: 712 DTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAR 771 T+L + +++FD G++ ++ + L P ++ FP + +G+ T DR AL R Sbjct: 686 QTDLEDYLLSMFDHFGVHIEELAPHTWQLNPQG-IITDSFPAMPAEGLIATCDRRRALGR 744 Query: 772 EDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQ 831 ED F+TW+HP++ ++L+L + G+ + ++L TLL+EL +++EA A +L Sbjct: 745 EDIGFLTWDHPMVTGAMELLLGSEAGNCSFAVLPTAG--ERTLLLELAFILEAIAAPRLH 802 Query: 832 LNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQ---QDVHAIL 888 ++RFLP TP+R++++ N++ + +L + + KL++ Q + A+L Sbjct: 803 MDRFLPATPIRLVINHKLENVSESHPGKVLEERL---RKGSPYKLLDNEQLARGTLPAML 859 Query: 889 QLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVME 948 E A L AA E ++ L E+ RL+ LR VN +IR E+ E ++Q+ Sbjct: 860 HHASTLAETGAETLRQAALKEMNQLLGHEVQRLKTLRQVNDHIRPQEIIMAEEQQKQLAT 919 Query: 949 SLDQAGWRLDALRLI 963 ++ QA RLD+LRLI Sbjct: 920 TILQARTRLDSLRLI 934 >UniRef50_UPI0000E0E48B ATP-dependent helicase HepA n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E48B Length = 944 Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/978 (40%), Positives = 560/978 (57%), Gaps = 53/978 (5%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M FT+GQRW+S + ELGLG V V R VT+ FP T E++ Y+ SP+ R++ GD Sbjct: 1 MNFTVGQRWLSSQQPELGLGIVADVQLRQVTIYFPVTQEDKHYSIDSSPLIRLLLEKGDI 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 D + V + + NGL+ Y+ ES V L E L ++P+DRLF Q+ Sbjct: 61 GLDVDKQEFCVLDTMDTNGLIQYLVEYTHNNES-VVLTETQLSHLTQINQPEDRLFTLQL 119 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D+ + F R A + P GL G R SLI HQ++IA+ VG R APRVLLADEVG Sbjct: 120 DKYNWFDARREAFDARFTHQQSPLLGLSGARVSLIEHQIHIANQVGNRFAPRVLLADEVG 179 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEA MI+ +Q LSG A R+LIIVPETL HQWLVEM RR N+ A+FD R Sbjct: 180 LGKTIEAAMIIQKQRLSGRATRILIIVPETLIHQWLVEMHRRVNVPCAVFDASRVEALLE 239 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 D NPFD EQ+V+ S+D + + WDL+VVDEAHHL WS + S EY +E Sbjct: 240 DGMNPFDAEQIVLISIDTLVTEPKINAWALASSWDLMVVDEAHHLHWSNETVSDEYALVE 299 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 L + PGVLLLTATP+QLG ESHFARLRLLDP RF DFA + EQ Y+ +A+ LL Sbjct: 300 GLTQITPGVLLLTATPDQLGHESHFARLRLLDPARFTDFATYEAEQAQYKVLAELTDALL 359 Query: 361 --------------AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSM 406 +SN+ + + + D+E L A ++ Q +++ Sbjct: 360 DEQSTMSLVAELAETEATISNELQTHVASIYTDIDVEYL----------ATTSHQSMINH 409 Query: 407 LMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARD 466 L+DRHGT R+ FRNTR + G +R LH L LP ++QT D R Sbjct: 410 LIDRHGTGRMFFRNTRQSIAGLNERILHAYPLALPEEWQTL--------------DCPRS 455 Query: 467 MLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLRER 526 E +++W DPRV+WL+ YL + K L+IC T LQL + +++ Sbjct: 456 HTC---FIHELPALHSSWLYDDPRVDWLLEYLED-TTNKTLLICRSQRTVLQLAEFIKKL 511 Query: 527 EGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFN 586 G VFHE MSIIERDRAA +F++ + A +LLCSEIGSEGRNFQFA H+++FDLP + Sbjct: 512 TGQHLPVFHENMSIIERDRAAHYFSDPENSAPLLLCSEIGSEGRNFQFAQHLILFDLPAH 571 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSV 646 PDLLEQRIGRLDRIGQ+ + IHVPY+E T Q+ L + YHEGL++F TC G ++ ++ Sbjct: 572 PDLLEQRIGRLDRIGQSQTVNIHVPYVEHTGQATLFKLYHEGLNSFNQTCAIGAKVFATL 631 Query: 647 YNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESI 706 + + + LA P + +D+I + +QGRD+LLEI ++G ++L +++ Sbjct: 632 DHKIQSALAEPTE---INDVIIQAAALASQFNEERQQGRDKLLEISASGKGTIESLVDAL 688 Query: 707 EEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDRE 766 + ++ +F + D +GI + +L P+D L P L ++G+TIT+ R+ Sbjct: 689 NAPELAHSVESFMHLICDALGIAHIVNDAHSFILQPTDQ-LAHAIPSLPDEGLTITYRRD 747 Query: 767 VALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQA 826 VA ARE+ FI+W+HPLI +D+I S G +++S + N ALP G VE +Y+++A Sbjct: 748 VATAREELSFISWDHPLIHEAIDIITSEVNGKASLSFMSNTALPAGAFFVECLYILQANT 807 Query: 827 PKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHA 886 N +LP TPV + LD GN++ + +L V+R KLV A+ + + Sbjct: 808 DNTTGFNPYLPQTPVLIQLDSQGNSM------NNVSVELTKVDRKLSQKLVPALAKPIKL 861 Query: 887 ILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQV 946 +L EA ++ ++ +AA +L AE++RL L+ VNP+I D E+ ++S +Q Sbjct: 862 VLAKAEALAQERVASVKEAAHEFIHTQLGAEITRLTELQKVNPSISDIEIAHMQSTLEQA 921 Query: 947 MESLDQAGWRLDALRLIV 964 + +A LDA+R+++ Sbjct: 922 QTRIQEATLYLDAIRVVI 939 >UniRef50_B5JQV3 Type III restriction enzyme, res subunit family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQV3_9BACT Length = 953 Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/977 (40%), Positives = 567/977 (58%), Gaps = 52/977 (5%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 + +GQR++S+ E ELGLG V VD V L FP++GE R+YA + + RV+F G+ + Sbjct: 4 YAVGQRFVSEPEPELGLGLVEEVDGYRVGLNFPASGEKRIYAAGAAVLKRVIFREGERVN 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 + G VE ++E +G+ Y G G + RE L + FS PQDRL +GQ++ Sbjct: 64 TLTGASFAVEAMEEVDGIFVYSG-------EGQSAREDELVAAGSFSHPQDRLMSGQVED 116 Query: 123 MDRFALRYRA----RKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADE 178 + F LR RA K S + R G G R LIPHQ I +V R PRVLL+DE Sbjct: 117 SEVFDLRQRALLMQNKIRSSELR----GFFGGRLDLIPHQYYILKEVSSRQLPRVLLSDE 172 Query: 179 VGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY--A 236 VGLGKTIEA +IL + G A+R LI+VPE L HQW VE+LRRF L F +FD+ER Sbjct: 173 VGLGKTIEACLILQRLRAVGRAQRALILVPEPLVHQWFVELLRRFGLWFGIFDEERCRAL 232 Query: 237 EAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREY 296 EA ++ NPF EQLV+CS+D+ S+ R EA WD+++VDEAHHL WS + S EY Sbjct: 233 EASNEGGNPFLDEQLVLCSVDYLANSEVRSWQAIEAGWDIVIVDEAHHLEWSPEEVSPEY 292 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAV 356 +E L E PG+LLLTATP QLG+ HFARLRLLDP+R+ D F EE + VA+ Sbjct: 293 ALVESLGERSPGLLLLTATPTQLGLAGHFARLRLLDPDRYSDLDTFQEEMSGFEKVAEIA 352 Query: 357 AMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRV 416 A ++ ++L N + L ++ +D + L + S AR L+ L+D HGT RV Sbjct: 353 AKIIDEDELDNSDAAALQDIF-HRDQDGLKKRLADLSAKKPGARDSLIKALLDEHGTGRV 411 Query: 417 LFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQE 476 +FRNTR +KGFPKR PL ++ + + + D D+ Y Sbjct: 412 VFRNTRANMKGFPKR--MYCPAPLKSEGNQTLLAKLVRELEAESTDSESDIRY------N 463 Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 F+G DPR+ WL+ +L + + K L+IC A+ LE LRE I +FHE Sbjct: 464 FKG--------DPRLVWLVSFLKARKGVKTLLICKSRQKAIALETALRESLNISIGLFHE 515 Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 + +++RDR AAWFAEED GAQVL+CSEIGSEGRNFQFA H+V+FDLP NP LLEQRIGR Sbjct: 516 ELQLVQRDRNAAWFAEED-GAQVLICSEIGSEGRNFQFAQHLVLFDLPINPGLLEQRIGR 574 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYL-- 654 LDRIGQ IQIHVPY+ + Q V+ W H+GLD FE +C G Y + + + + L Sbjct: 575 LDRIGQTSTIQIHVPYVVGSPQEVVAEWCHQGLDGFE-SCVHGGAEYLARFGERLVSLAI 633 Query: 655 -------ASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIE 707 A D+ E F D + R + L A+L +GRDRLLE++S GE A+ + + Sbjct: 634 EYGSGKKAKRDKLEAFIDETQAFRSE---LSARLSKGRDRLLELNSFNGEVAKEVVREVR 690 Query: 708 EQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREV 767 + ++D+NL +F +L + G+ D++ D ++L PS H V FP L +G TF+R Sbjct: 691 KAENDSNLKSFLFDLLEFYGVRVDEQEDGDVILDPS-HAYVESFPSLPAEGTLATFERRR 749 Query: 768 ALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAP 827 A+ RED FIT +H L+ + +DL+++ + G S SL ++ L +E+++V+E A Sbjct: 750 AITREDMMFITQDHSLVSDAIDLLVTSEKGVSAFSLHESDD---PGLSLEVVFVLETVAL 806 Query: 828 KQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAI 887 L ++RFL PTP+R+++D GN+L+ + + L + + + ++ + A+ Sbjct: 807 SHLHVDRFLSPTPIRVVVDIRGNDLSEERDLAWVEENLEPGDINRFLERPGFSREFLEAM 866 Query: 888 LQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVM 947 + E EK + L A + +A + L E+ RL L+ +N N+R +E+ ++ Q V Sbjct: 867 IGGAEEIAEKRVKRLKTAFKTKAKKVLQHEIERLMDLQKINDNVRSEEIAIAKAELQGVN 926 Query: 948 ESLDQAGWRLDALRLIV 964 +++D + RLD+LRLIV Sbjct: 927 QAIDDSCLRLDSLRLIV 943 >UniRef50_B4DAH6 Helicase domain protein n=2 Tax=Verrucomicrobia RepID=B4DAH6_9BACT Length = 916 Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/971 (40%), Positives = 557/971 (57%), Gaps = 70/971 (7%) Query: 1 MPFTL---GQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNP 57 MP L GQRW+SDTE ELGLG ++ + V + FP+ E R YA +P+ RV F+ Sbjct: 1 MPSDLPIPGQRWVSDTEPELGLGIILKAEYGRVEVFFPAAMEQRQYALKSAPLRRVRFHE 60 Query: 58 GDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFA 117 GD I + +G Q+ V ++E +G+L Y+ G + E L + FSKP+DRL A Sbjct: 61 GDRIKTSEGQQLLVTTIEERSGMLVYLA-------EGQEVTEAQLSDTISFSKPEDRLLA 113 Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLAD 177 GQ+D F LR A + + G G R LI HQ++IA +V R PRVLLAD Sbjct: 114 GQVDENATFDLRGEALQRRCRHRQSAVRGFVGGRVDLITHQMSIAGEVASRLVPRVLLAD 173 Query: 178 EVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAE 237 EVGLGKTIEAG+ILH+ L+G A+R+L++VPE+L HQW VEMLRRFNL F+LFD+ER Sbjct: 174 EVGLGKTIEAGLILHRLHLTGRAQRILVLVPESLVHQWFVEMLRRFNLLFSLFDEERCVS 233 Query: 238 AQHD--AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 + + NPF QL+ICS F + QR + + A WDLLVVDEAHHL WS +A S + Sbjct: 234 IEQNDPTANPFLDSQLIICSTAFLSGNAQRAQQVLAAGWDLLVVDEAHHLEWSHEAVSPQ 293 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 Y +E LA+ G+LLLTATP+QLG E HFARLRLLDP+R+ + +F+EE ++Y VA A Sbjct: 294 YALVESLAKQTKGLLLLTATPQQLGPEGHFARLRLLDPDRYDNLERFMEEAEHYEQVAKA 353 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR 415 + L+ G L+ + + G Q + Q + + + AR L+S L+D GT R Sbjct: 354 IDRLIDGKPLTKSDRTVFG-----QKSSRIRQRCDELAAGDEKARAALISDLLDEFGTGR 408 Query: 416 VLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ 475 V+FRNTR + GFP+R+ + L +G GA Sbjct: 409 VMFRNTRAALSGFPERQAKLVSLD-----------AGKTGA------------------- 438 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFH 535 + +++WL+ L +KVL+IC ++ + L+ + A+FH Sbjct: 439 ----------ELEAKIKWLVALLKEFAEEKVLLICRTRELVEEISERLQRELNVAVALFH 488 Query: 536 EGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIG 595 E +++++RDR AA+F+EE+ GA++L+CSEIGSEGRNFQFA H+V+FDLP +P+LLEQRIG Sbjct: 489 EELTLLQRDRNAAFFSEEE-GARILICSEIGSEGRNFQFAHHLVLFDLPEDPELLEQRIG 547 Query: 596 RLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLA 655 RLDRIGQ IQIHVPYL TA VL RWYHEGL+AFE I ++ DL L Sbjct: 548 RLDRIGQTATIQIHVPYLRGTASEVLARWYHEGLNAFEKNPHGASEIVRALEKDL-AALR 606 Query: 656 SPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 + LI R+ + +LE G DRLLE++S A+ L I D D Sbjct: 607 QKFSAAKLEKLITKSRDLSGKVAKKLEHGHDRLLELNSCKVGVAEELTRQIRALDTDEKF 666 Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQ 775 F + L D G+ +D G +L P H++ FP + E+G+T+TFDR AL+RED Sbjct: 667 EHFVIGLLDHFGVQVEDHGVRSYILRPG-HLITDAFPTVPEEGMTVTFDRTRALSREDLG 725 Query: 776 FITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRF 835 F++ +HPL+R LDL+L + G++ + K +L+E+ VVE AP L +RF Sbjct: 726 FVSGDHPLVRASLDLLLGSERGNTAFGMWKGGG--SEGMLLEIYTVVECIAPAALHADRF 783 Query: 836 LPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVN--AVQQD-VHAILQLGE 892 LP TP+R+++D + LA + E + + +L++ AV++ + A+L+ + Sbjct: 784 LPATPIRVVVD---HALADHTDDEAVAS--AKLEKGDIFRLLDRGAVKKKLLPAMLEKAQ 838 Query: 893 AQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQ 952 A + A+ LI+AA +L E+ RLE LR +N ++R +E+ AI + + ++ Sbjct: 839 AMAAERAQRLIEAANTAMTLQLRNEIERLEDLRQINDHVRPEEIEAIRQQQTDLQAAIAA 898 Query: 953 AGWRLDALRLI 963 A RLDA+RLI Sbjct: 899 AQPRLDAVRLI 909 >UniRef50_Q1Q8E0 Helicase-like n=22 Tax=Gammaproteobacteria RepID=Q1Q8E0_PSYCK Length = 1028 Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/979 (39%), Positives = 572/979 (58%), Gaps = 46/979 (4%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F +GQR++SDTESELGLG V+ VD R V +LFP + E R+YA++ +P++RV+F GD+I+ Sbjct: 79 FAVGQRYLSDTESELGLGVVIDVDDRCVHILFPQSEETRVYAKNSAPLSRVVFKVGDSIS 138 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 G V V+E G+L Y E A+ E L + + +KP +RL AG+I+R Sbjct: 139 DQAGKSYTVNAVEEVMGVLKY-----SVNEHEKAIMETRLAANITLAKPLERLLAGRIER 193 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 D + LR + S P GL G R +I HQL IAH+VG+R APRVLLADEVGLG Sbjct: 194 SDWYDLRQDILRMQSALAGHPLKGLMGARVDIIEHQLYIAHEVGKRIAPRVLLADEVGLG 253 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAE-AQHD 241 KTIEAG+I+HQQLL+G AERVLI+VP++LQ+QW++E+ RRFNL FALFD R A +HD Sbjct: 254 KTIEAGLIIHQQLLTGKAERVLILVPDSLQYQWMIELRRRFNLNFALFDLVRTAAIKEHD 313 Query: 242 A-YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSE-DAPSREYQAI 299 N F TEQ VI +D + EA +DLLVVDEAHHL W E + +Y I Sbjct: 314 PEQNVFMTEQCVIAGMDLLLDHPDLYDQAMEAGFDLLVVDEAHHLHWDEAQGGNDKYDLI 373 Query: 300 EQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML 359 AE GV+LLTATPEQLG +SHFARLRLLDP+RF D +F++ Q + A ++L Sbjct: 374 ADFAEETAGVMLLTATPEQLGAQSHFARLRLLDPDRFDDLDEFIDGQDAFAETAAVASLL 433 Query: 360 LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 + LS+ ++ L ++ E L N D + R ++ L+DRHGT R+LFR Sbjct: 434 IEDKPLSDGQIAALSSLLTISIDE--LATINED----EKLRTYALNELLDRHGTGRILFR 487 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 NTR VKGF R LPLP + + + +G + E+++ E Sbjct: 488 NTRESVKGFYGRSSQPYPLPLPEAWVDSYQTNGKL---------------REQLWGEENQ 532 Query: 480 DNATWWNFDPRVEWLMGYLTSH-RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 + W DPRV WL+ L + +KVL+I AT LE VLR GI+ A+F E M Sbjct: 533 PDGGWLEDDPRVPWLIDILKGELKHKKVLLIARSGATVESLEAVLRLHAGIKTAIFTEQM 592 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 +++ERD+AAA+FA+ + GAQ+LLCSEIGSEGRNFQFAS ++++DLP NPD LEQRIGRLD Sbjct: 593 TLLERDQAAAFFADGE-GAQILLCSEIGSEGRNFQFASQLILWDLPANPDTLEQRIGRLD 651 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ I +HVPY++ TAQ L +WY+ L+ F PT +++ + +L L D Sbjct: 652 RIGQTQQIMLHVPYVQGTAQERLYQWYNNALNMFNQISPTAQSVQEQYIQELKPMLEGAD 711 Query: 659 QTEG---FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 D+I + + L+ QL+ GRDRLLE +S A +A+++ + D L Sbjct: 712 NDVNRAILADIIAEAAQTRQGLETQLQAGRDRLLEYNSCRPRVAGRIADAMRDFDGHNLL 771 Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDF----PGLSEDGITITFDREVALAR 771 F F I + + D V++P D + D+ P EDG+T+TF+RE AL R Sbjct: 772 PQFIERFFASANIEHNIQRDGSWVISPIDSTEISDYIDGLPLGDEDGMTLTFEREQALQR 831 Query: 772 EDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQ 831 ED FIT EHPL++ +L + G++T+++LK+ A+P G +++E+ + VEA APK L Sbjct: 832 EDIAFITHEHPLMQAIYELASTSTFGNTTVAMLKSAAVPQGMVMLEVNFRVEAIAPKLLN 891 Query: 832 LNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLV----NAVQQDVHAI 887 L L +R+ + + G++L+A++ + + ++++ +++ + ++Q + Sbjct: 892 LPATLSTQNIRVFISEQGSDLSARISADMIMPHIERLDKNRARQVIKVRGDVIEQRYYEA 951 Query: 888 LQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVM 947 + Q+ + + A ++ S E+ RL+ L+ +NPN+R E+ +E + Q Sbjct: 952 EDIARQQLTEIG----EQASARFSQQWSREIKRLKHLQTINPNVRPAEIERLEQLKLQGE 1007 Query: 948 ESLDQAGWRLDALRLIVVT 966 ++L D++R++V Sbjct: 1008 QALAGLSLVPDSIRVLVAV 1026 >UniRef50_B1ZQP7 Helicase domain protein n=4 Tax=Bacteria RepID=B1ZQP7_OPITP Length = 982 Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/992 (39%), Positives = 555/992 (55%), Gaps = 42/992 (4%) Query: 1 MPF-TLGQRWISDTESELGLGTVVAVD--ARTVTLLFPSTGENRLYARSDSPVTRVMFNP 57 MP LGQR +S+ E ELGLG V +VD AR + + FP+TGE RLYA S + RV F Sbjct: 1 MPLEVLGQRCLSEREPELGLGIVASVDRAARRLGIDFPATGEKRLYALGTSVLKRVQFRA 60 Query: 58 GDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFA 117 GD++TS +G VE V+EE+GLL Y G +G LRE + S P +RL A Sbjct: 61 GDSVTSREGTTFTVETVEEEDGLLVYFG-------AGRRLREDGISDVTSVSSPAERLMA 113 Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLAD 177 GQ+D + F LR + + ++ + G G R LIPHQ I H+V R PRVLLAD Sbjct: 114 GQVDPGEVFELRSQVLEAQAQFRQSEVRGFLGGRIELIPHQFYILHEVAARQIPRVLLAD 173 Query: 178 EVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA- 236 EVGLGKTIEA +I+ + L G A RVLI+VPE+L HQW VE+LRRFNL F+++D+ER Sbjct: 174 EVGLGKTIEACLIVQRLLAVGQARRVLILVPESLTHQWFVELLRRFNLWFSIYDEERCTA 233 Query: 237 -EAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 E NPF + QL + + F ++R E A WD++VVDEAHHL W+ DA S E Sbjct: 234 QEQSTPGENPFLSSQLALAGVRFLAADERRREQAIAAGWDVVVVDEAHHLAWAPDAASPE 293 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 Y +E LA PG+LLLTATP QLG+ HFARLRLLDP+R++DF +FV E + Y VA Sbjct: 294 YAIVEALARRAPGLLLLTATPTQLGLAGHFARLRLLDPDRYNDFDRFVAEAEGYATVAGV 353 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR 415 +LA L+ + L + I ++D L Q + +E AR+ L+ L+D+HGT R Sbjct: 354 AEKILAQKPLTPRDHAAL-KAIFQKDPVRLEQHLAALAEAQPGAREALLKTLLDQHGTGR 412 Query: 416 VLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY-PERIY 474 V+FRNTR + GFPKR+ + L + A + + +S ED ++ P I Sbjct: 413 VMFRNTRAAMSGFPKRKFCPVPLGVDLGAAAAGEPASAAPTDESDEDLLLELGEEPGAIV 472 Query: 475 QEF-----------------EGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATAL 517 EG+ + DPR++WL+ +L HR+ KVL+IC Sbjct: 473 SGAALLARAARELQAEESGTEGEIRYAFRGDPRIKWLVDFLRRHRTTKVLLICRSPRKVA 532 Query: 518 QLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH 577 +E ++ER I++A+FHEG+S+++RDR AAWFAE D GAQ+LLCSEIGSEGRNFQFA H Sbjct: 533 AIEAAVQERAAIKSALFHEGLSLVQRDRNAAWFAEPD-GAQLLLCSEIGSEGRNFQFAHH 591 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP 637 +V+FDLP NP LLEQRIGRLDRIGQ I+IHVPYL +A ++ WY GL+AFE Sbjct: 592 LVLFDLPLNPGLLEQRIGRLDRIGQTETIRIHVPYLTGSATECVIEWYQRGLNAFEAPLH 651 Query: 638 TGRTIYDSVYNDLINYLAS-----PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIH 692 G L+ A D+ E D L+ + E L +L+QGRDRLLE+ Sbjct: 652 GGDAYRQEFRARLLALAAKYRGGEIDRAE-LDRLVADTSAFREVLARKLKQGRDRLLELA 710 Query: 693 SNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFP 752 S A+++ E + D D + + + + G+ + + L PS L FP Sbjct: 711 SFNRATAESVIERVRAADADPRVRQVLLAVLEHFGVEVKEHEAGDLALDPSRAYL-ESFP 769 Query: 753 GLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVG 812 + +G+ TF R A ARED +F++ +HPL+++ LDL++ G++ + + Sbjct: 770 SVPAEGMLATFSRSRATAREDLRFLSADHPLMQDALDLLIDSPAGTAAFGTIVSDQ---P 826 Query: 813 TLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHT 872 LL+E ++V+E A + ++++FL PTPVR+L+D G +L A+ + R+ + H Sbjct: 827 NLLLEAVFVLETVADSRWRVDQFLAPTPVRVLIDLRGTDLTAERDARAVAREFEDADIHR 886 Query: 873 GSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIR 932 + + +L L A A L AE RLE LR +N +R Sbjct: 887 FLERPGFDAPLLQRMLAAANGVAAARTGELKSEALARATAALDAEAQRLEDLRRLNDQVR 946 Query: 933 DDELTAIESNRQQVMESLDQAGWRLDALRLIV 964 +E+ Q +++QA RLD++RLIV Sbjct: 947 PEEIELTRQQLQHTRTAIEQARLRLDSIRLIV 978 >UniRef50_A6DT84 ATP-dependent helicase HepA n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DT84_9BACT Length = 943 Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/969 (37%), Positives = 561/969 (57%), Gaps = 45/969 (4%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 + GQR+ S++E ELGLG V+ + + +LFP+T RLY +PV RV G + Sbjct: 2 YRAGQRYFSESEPELGLGVVLKHEFGNLEILFPATETRRLYVSESAPVKRVALRIGQSFD 61 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 + +G ++ E++EE+G YI + G +RE L + L S P+DRL G D Sbjct: 62 A-EGEDFKITEIREEDGNFLYINAK------GQEVREFQLPNHLSLSGPEDRLMMGSFDD 114 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 F LR R + SEQ G +G R L+PHQ +A +V PRVLLADEVGLG Sbjct: 115 PHLFDLRRRTLMHQSEQLSSEIYGFQGARLDLLPHQFYVADEVSSMAKPRVLLADEVGLG 174 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY--AEAQH 240 KTIEAG+ILH+ LL G RVLI++P+ LQ+QW VEM R+FNL F+L DDER+ EA Sbjct: 175 KTIEAGLILHRLLLRGDVTRVLILLPDALQNQWFVEMYRKFNLWFSLIDDERFKAVEANP 234 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 D NPF + L+ICS ++A S + E + + EWDL++VDEAHH+ W + S EY +E Sbjct: 235 DNDNPFLDDPLIICSTEYAAASAKVSEAIVQGEWDLIIVDEAHHISWRPETVSNEYLLVE 294 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 +LA+ V ++LLTATP+QLG ESHFARLRLLDP+RF+D F EQ YR + LL Sbjct: 295 ELAKKVERLVLLTATPDQLGEESHFARLRLLDPDRFYDLDVFKNEQSQYRDKVKGLDKLL 354 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN 420 KL + + +++G+Q PLL+ + + Q R EL+ L+DRHGTSRV+FRN Sbjct: 355 EAEKLDAKAMKLCEKLLGDQ--HPLLERLKKEVLEGQ-LRHELLRELIDRHGTSRVIFRN 411 Query: 421 TRNGVKGFPKRELHTIKLPLPTQYQTA-IKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 TR ++ FP ++ P P + A + G ++ E + PE+ Sbjct: 412 TRKVMENFP------VRCPRPIGLEAADLDFVGKEASQILEESDLDLFVCPEK------- 458 Query: 480 DNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMS 539 + +V+W+ L +K L+IC+ +EQ +R+ ++ AVFHEG+S Sbjct: 459 --------NVKVQWICETLKEKVDEKFLLICSSREKVEAIEQGIRQHMELKMAVFHEGLS 510 Query: 540 IIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDR 599 + +RDR A +F+ +DTGA++L+CSEIGSEGRNFQF ++++FDLP NP LLEQRIGRLDR Sbjct: 511 LNQRDRNAVFFS-QDTGARLLICSEIGSEGRNFQFCQNLILFDLPMNPGLLEQRIGRLDR 569 Query: 600 IGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS--- 656 IGQ DIQI PY + + +SVL +Y GLDAF G + + L + Sbjct: 570 IGQTADIQIFYPYRKSSVESVLADFYSLGLDAFARPLHGGEKMTQELKPYLEEVIVQWAE 629 Query: 657 --PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTN 714 +E +L+K + K QLE+GRD LLE++S E+ + +S+ + D++ Sbjct: 630 KIEGASEALAELLKVSSKLATETKCQLEEGRDHLLELYSFDPERGYEICQSLRKTDNEGA 689 Query: 715 LIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDA 774 L + +LFD +G++ D D + + P ++L D PGLS +G I R L RED Sbjct: 690 LFKYLEDLFDYLGVDCRDVEDAVYKIEPGQNLLC-DLPGLSREGNLIATQRAETLQREDV 748 Query: 775 QFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNR 834 +TWEHPL+R+G+D++ SG++G++ ++ + + ++++E + V+E P + +NR Sbjct: 749 ALMTWEHPLLRSGMDILSSGESGNNCFAICVDPS--SRSIILEAVLVLECLLPAKSGVNR 806 Query: 835 FLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQ 894 FLPPTP+ + +D G NL+ ++ +E + +L R V +Q + +L++ + Sbjct: 807 FLPPTPIFVRVDHRGRNLSTEIVYEECDLELGDPMRLMDKSAVK--EQLLPEMLRITQKL 864 Query: 895 IEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAG 954 ++ + +ID A+ + ++E++RL+ L+ N I+D+E+ + + + +M + ++ Sbjct: 865 AQEKSVKIIDEAQVKVKAYFASEMARLKDLQEKNSFIKDEEINDLNNAFELLMTEIPKSR 924 Query: 955 WRLDALRLI 963 R DALRL+ Sbjct: 925 IRQDALRLV 933 >UniRef50_A6VZC5 Helicase domain protein n=2 Tax=Marinomonas RepID=A6VZC5_MARMS Length = 942 Score = 632 bits (1630), Expect = e-179, Method: Compositional matrix adjust. Identities = 382/981 (38%), Positives = 546/981 (55%), Gaps = 60/981 (6%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 + GQRW S E +LG+G +V ++ TL FP +R Y+ + + R GD + Sbjct: 2 YQTGQRWSSRNEPDLGVGMIVDTQNKSFTLHFPDAEADRQYSNDQTSLVRRTLTVGDQLH 61 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDT--EESGVAL---REVFLDSKLVFSKPQDRLFA 117 D V EV+E N L+ Y + D EES + + LDS L S P R++ Sbjct: 62 FQDE-TFTVLEVEEINDLIEYRISEDDDWLEESIIQFPRNDKNELDSLLALS-PARRMW- 118 Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLAD 177 F LR ++ + P GL G + L+PHQ+ +AH++ R R LL D Sbjct: 119 --------FDLRRHTLEHQAANAASPVRGLMGLKAELLPHQIYLAHEIANRPKARALLCD 170 Query: 178 EVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAE 237 EVG+GKT+EAG+ILHQ+LL+G +RVLI+ P LQHQWLVEMLRRF+ F+L ++ Y + Sbjct: 171 EVGMGKTLEAGLILHQRLLNGLCKRVLILTPTNLQHQWLVEMLRRFHQPFSLINESVYED 230 Query: 238 AQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQ 297 NPF+ + VI +D+A + + +H+ +AEWD+++VDEAHHL W + PS YQ Sbjct: 231 FMEGDDNPFEQQPFVISPIDWASQHPKATQHMLDAEWDMVIVDEAHHLAWHPETPSIGYQ 290 Query: 298 AIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVA 357 + +LA +LLL+ATPEQ G HF+RL+LLD + +HDF + +Q+ ++ A+ Sbjct: 291 VVARLAAKTESLLLLSATPEQTGEREHFSRLQLLDADHYHDFEHYQTQQQAFKQAAELAE 350 Query: 358 MLLAGNKLSN-----DELNMLGEMIGEQDIEPLLQAANSDSEDAQS-ARQELVSMLMDRH 411 LL ++ + D G + E + QA S S Q+ A +E +S L+DRH Sbjct: 351 ALLPFSQEDSSPAALDWNKAFGSYLQEVSAKDWFQALTSKSGAEQTEAAKEAISWLIDRH 410 Query: 412 GTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE 471 GT R +FRNTR V GFP R LH+ L +++A + E D L Sbjct: 411 GTGREMFRNTRAAVGGFPDRYLHSYPLDNNEHFESADR-------HVQPETEVPDGL--- 460 Query: 472 RIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRA 531 W DPR WL +L ++ KVLVIC A A L L G ++ Sbjct: 461 -------------WEKDPRWVWLKEFLEC-QADKVLVICHTADMAQWLNDQLT-FAGFQS 505 Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLE 591 A FHE M +I RDRAAA+FA+ED GAQ+L+CSEIGSEGRNFQF+ H+VM+DLP +PDLLE Sbjct: 506 ADFHEQMPLIHRDRAAAYFADED-GAQILVCSEIGSEGRNFQFSHHIVMYDLPEHPDLLE 564 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI 651 QRIGRLDR+GQ +D+QIHVPYL+K+ Q L WYH L+AF T +G + ++ + L Sbjct: 565 QRIGRLDRLGQLNDVQIHVPYLKKSVQERLFNWYHHALNAFCRTTGSGDKVEEAFGDSLH 624 Query: 652 NYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDD 711 YL D DL+K HEAL Q+E+GR+RLLE+ S E+A+AL E I Q Sbjct: 625 AYLHGQDDDT---DLLKEANIYHEALLKQMEEGRNRLLEMSSCRPEQARALIEQINNQAT 681 Query: 712 D-----TNLIAFAMNLF-DIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDR 765 + A N++ D I DD L PS M++ PG+ E+G + DR Sbjct: 682 KGLHHYIEQVTHAFNIYADCIN---DDPDRAAWFLRPSTDMMLEALPGIEEEGKMLMLDR 738 Query: 766 EVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQ 825 A RED F TWEHPLI +D + D+G T ++L ALP GT+LVE ++V+EA Sbjct: 739 RQASQREDVAFATWEHPLITMLMDEVQGFDSGKLTSAILPIAALPEGTVLVESMFVIEAT 798 Query: 826 APKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVH 885 A +L+L + LP TP+ L D NG L Q + + +L V + V A+++++ Sbjct: 799 AHPRLKLAQSLPMTPMWQLSDSNGKFLHQQFTADKWAEKLKGVPNRVAEQWVAALRKNLI 858 Query: 886 AILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQ 945 +LQ + + AR ++ AA+ + E+ RL L+A N IRD+++ +E+N Q+ Sbjct: 859 EVLQAHQLNAQDQARPIVHAAKTSYQHRCQNEIERLVELKAFNDTIRDEDIERLETNMQE 918 Query: 946 VMESLDQAGWRLDALRLIVVT 966 + +D+ RLDA+R+I+ T Sbjct: 919 GLTRIDEHQIRLDAIRIILTT 939 >UniRef50_C0QC91 RapA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC91_DESAH Length = 905 Score = 614 bits (1583), Expect = e-174, Method: Compositional matrix adjust. Identities = 371/973 (38%), Positives = 526/973 (54%), Gaps = 76/973 (7%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M GQR+ S+ E ELGLG +V D+RT+T+ F ++ R Y + +P+ RV F GDT Sbjct: 2 MQLKKGQRFTSEMEPELGLGVLVTSDSRTLTVNFAASNCVRRYTTAAAPLRRVRFEVGDT 61 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I D M +E V +GLL Y G +G + E L + S P+DRL+AG Sbjct: 62 IVFGDNRTMVIETVDNRDGLLVYGG-------AGECVPEQDLADTMSLSAPRDRLWAGIF 114 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D D F LR+ A + P G G R LIPHQ IA +V R+ PR+LLADE G Sbjct: 115 DPADTFDLRFEANRLRHAHETSPAMGFMGGRVDLIPHQFYIAGEVSNRYLPRILLADETG 174 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDE--RYAEA 238 LGKTIEA ++LH+ LLS RVLI+VPE+L HQW +E+ RRFNL F +FD E R E Sbjct: 175 LGKTIEACLVLHRLLLSERISRVLILVPESLVHQWFIELYRRFNLVFRIFDPELCRELER 234 Query: 239 QHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA 298 NPF +EQLVIC LD + L +A WD++VVDEAHHL + Y Sbjct: 235 SEPGQNPFFSEQLVICCLDGMAADETSRIQLVQAGWDMVVVDEAHHL----EEGGAAYSL 290 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAM 358 +E LA G++LL+ATPEQLG +HF+ LRLLDP+R+ +F ++EE + YR A+ Sbjct: 291 VEALATAQAGMMLLSATPEQLGRRNHFSHLRLLDPDRYTNFDDYLEESRQYRQTAET--- 347 Query: 359 LLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLF 418 L+ ED+Q ++ L+D HG R +F Sbjct: 348 ---------------------------LENLADPGEDSQE-----ITALLDSHGPGRAVF 375 Query: 419 RNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 RNTR +KGFP+R + PL + T + + G A ++ A D Sbjct: 376 RNTRAVIKGFPQRS--GVLYPLVPKTDTTVAL-GRCDAPVASLSMADD------------ 420 Query: 479 GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 D ++ ++EWL G L S + +KVL+ICA + A +E L ++ A F + M Sbjct: 421 -DPGVFF---AKIEWLKGLLKSLKREKVLLICATSEKAAAIETALATLITMKIARFTQDM 476 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 ++++RDR+AAWFAE GA++++CSEIGSEGRNFQFA H+VMFDLP NP+L+EQRIGRLD Sbjct: 477 TLVQRDRSAAWFAEP-LGAELMICSEIGSEGRNFQFAHHLVMFDLPDNPELVEQRIGRLD 535 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ H I IHVPY + Q+VL RWY EG FE+ I+ L + D Sbjct: 536 RIGQHHPIVIHVPYAHDSRQAVLARWYREGTGIFENNISGIHQIHRQFAARLADLSDLCD 595 Query: 659 QT-----EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDT 713 Q D LI + R +L+ GRD+LLE++S KA+ L ++I E D D Sbjct: 596 QAGQVPYGALDQLIADTRTFAAETSKRLKSGRDKLLELNSFRPRKAEQLVKTICETDQDQ 655 Query: 714 NLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALARED 773 ++ F +F I+ + L + VP FPG DG+ +TFDR VA+ R+D Sbjct: 656 SIDLFMAKIFKFYAISPEPIMARTFRLEVFNSAGVP-FPGFKGDGMIVTFDRTVAVTRDD 714 Query: 774 AQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLN 833 F+TW+HP++ ++L L D G++ I+ + +L+E +Y +E AP+ L +N Sbjct: 715 IVFLTWDHPMVTGAMELFLGSDHGNAAIAEVNGTG--KFEILLESVYTLECVAPRALHMN 772 Query: 834 RFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEA 893 RFL TP+R L+D N NL+ + L+ R + +Q + +L G Sbjct: 773 RFLARTPIRTLVDHNLTNLSQDRSWALTAASLSTPARSWLGQFPEIKEQLLPELLAAGRR 832 Query: 894 QIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQA 953 E++A +I A+ ++ + E +RLE L+ +NP IR+DE+ + ++ +DQA Sbjct: 833 FSEQAAARVISRAKAAVEKVVGGEAARLERLKRINPAIREDEIRRAKDEATTLVIHIDQA 892 Query: 954 GWRLDALRLIVVT 966 RLD+LRLI V+ Sbjct: 893 RLRLDSLRLIKVS 905 >UniRef50_Q21K39 Helicase-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21K39_SACD2 Length = 874 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 347/976 (35%), Positives = 518/976 (53%), Gaps = 120/976 (12%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRW+ D+E ELGLG VV +D RTVT+LFP R Y +P+TR+ F GD I Sbjct: 4 FVQGQRWVVDSEPELGLGMVVGMDERTVTILFPEVDTERRYNAQQAPLTRIQFEVGDEIQ 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 +G V V E+NG+L Y ++G + E L + ++P RL GQ+D+ Sbjct: 64 PREGEPQIVATVHEQNGVLVY------ETQNGQLVVETMLAGSIRLNQPYMRLITGQLDK 117 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQ---RTSLIPHQLNIAHDVGRRHAPRVLLADEV 179 + F R RK+ + + SGL+G R +LIPHQL +A R RVLLADEV Sbjct: 118 PNWFHFR---RKFDNAMTKAWCSGLKGYLGVRANLIPHQLYVATSACNRERVRVLLADEV 174 Query: 180 GLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY---- 235 GLGKT+EAG+IL + L R LIIVP+TLQ QWLVE++R+F+L +L+D E Y Sbjct: 175 GLGKTLEAGLILSRLLKLERVSRALIIVPDTLQVQWLVELVRKFSLYPSLYDGEGYDFGN 234 Query: 236 AEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 A ++ TEQ + S DF D+ +VDEAHH+ S Sbjct: 235 AGVHIVPHSVLITEQENLLSHDF----------------DIAIVDEAHHI----SMESEG 274 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 + ++ L+ + ++LLTATPEQLG ESHFARL+LLD +F DF F+ ++ Y ++ Sbjct: 275 FAVLKMLSTLLNHLILLTATPEQLGAESHFARLQLLDAAKFTDFDSFISQENTYAELSKR 334 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR 415 + L AG +++ + +EP D E ++ L+D+HG R Sbjct: 335 IQDLPAGKD----------QLVADLGLEP------GDDEF-------VIKQLLDQHGVGR 371 Query: 416 VLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ 475 V+FRN R V GFP R + LP Q + ED Sbjct: 372 VMFRNARKAVAGFPAR------ICLPHQLE---------------ED------------- 397 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFH 535 +D + EWL +L ++ QK LVIC A T + E L E+ GI AVF+ Sbjct: 398 ----------GWDSKFEWLAQWLKANPKQKALVICHTADTVKECELYLWEKHGIDVAVFY 447 Query: 536 EGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIG 595 E ++IERD++AA+FA+E+ GA++LLCSEIGSEGRNFQF+SH++ DLP +P+LLEQRIG Sbjct: 448 EEQTLIERDKSAAYFADEERGARILLCSEIGSEGRNFQFSSHLICLDLPDHPELLEQRIG 507 Query: 596 RLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLA 655 RLDRIGQ +D+ +HVP ++ + + WY++ L+ E P I+D + Sbjct: 508 RLDRIGQKNDVSVHVPCHPESDTAKQLFWYNDILNCVEQQNPASTAIHDKYWQQDSLSWG 567 Query: 656 SPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIE--EQDDDT 713 S D E RE+ L+ ++ +GRD LLE++S A LA+SI EQ Sbjct: 568 SADLAE--------IREELAQLQLKIVEGRDALLELNSCRQPFADQLAQSIADFEQATPE 619 Query: 714 NLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALARED 773 L++ A L + + D + L PSD ML+P PGL +G+ +T+DR++A +RED Sbjct: 620 ELVSEASELLQ---FHYEQTFDGIFSLIPSDKMLIPALPGLPAEGVELTYDRDIANSRED 676 Query: 774 AQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLN 833 F+TW+ P I +L+ + GS+++++L ++ LP G L+E+ + Q+P + Sbjct: 677 LHFLTWDSPFIEGLWELLHHSELGSASVAMLPSRQLPAGHCLLEVCFDFMIQSPAAKECL 736 Query: 834 RFLPPTPVR-MLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGE 892 F+ + VR ++LD N+L+ + L V +H +++ + ++ + + E Sbjct: 737 PFIQESSVRSLVLDVGENDLSGILPESALEANLQGVKKHLAREVIKSRKEAIPQWFKKAE 796 Query: 893 AQIEKSARALIDAARNE-ADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLD 951 I + ++ + AA E A E+ RL+ L+A NP I D E+ +E Q V +++ Sbjct: 797 -DISVAKKSAVQAAATERAQSFFEGEIKRLKTLKAKNPLIDDAEIALLEVKSQAVQHAIN 855 Query: 952 QAG-WRLDALRLIVVT 966 A +L A+RLIV+T Sbjct: 856 HAAHLQLSAIRLIVIT 871 >UniRef50_C5BJV2 RNA polymerase-associated protein RapA n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BJV2_TERTT Length = 879 Score = 541 bits (1393), Expect = e-152, Method: Compositional matrix adjust. Identities = 347/968 (35%), Positives = 516/968 (53%), Gaps = 97/968 (10%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRW+ D+E ELGLG V V+ARTV++ FP R YA + +P+TR+ +N D I Sbjct: 4 FVQGQRWVVDSEPELGLGIVTGVEARTVSIFFPQGECERNYATAQAPLTRIQYNIDDRIE 63 Query: 63 SHDGWQMQVEEVKEENGLLTYI--GTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 DG + +V V E+ GLL Y G RL + E L +++ ++P RL GQ+ Sbjct: 64 LADGSEAKVVHVHEQGGLLIYDIGGDRL--------VPETMLAAEVSLNQPLVRLLTGQL 115 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D F R + + ++ GL G R +LIPHQL +A RVLLADEVG Sbjct: 116 DAPKWFYFRRQLDAAMGKTWQSRLGGLLGVRANLIPHQLYVAWMACEHEKVRVLLADEVG 175 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMIL + L R LI+VP+ LQ QWLVE++R+F L LF DE +H Sbjct: 176 LGKTIEAGMILSRLLKFERVARALILVPDALQVQWLVELVRKFGLMPVLFSDE-----EH 230 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 D F + Q+ I + +R +E L AE+D+ +VDEAHH++ +A + +E Sbjct: 231 D----FSSGQIHI--VPHSRADALSVE-LQAAEFDITIVDEAHHILPESEA----FVCLE 279 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 L+ ++LLTATPEQLG ESHFARL+LLDP +F + E++ +Y+ + + L Sbjct: 280 ALSATSDHLVLLTATPEQLGAESHFARLQLLDPAKFSSLEKLHEQEAHYQSLNQRIRALP 339 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN 420 AG +E ++ ++ + Q LV L+D HG RV+FRN Sbjct: 340 AGRDALIEEYHLAKDI----------------------SDQALVDQLLDSHGVGRVMFRN 377 Query: 421 TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD 480 R+ + GFP+R+ A ++D Sbjct: 378 VRSAIAGFPQRQ---------------------AVAHSLSDD------------------ 398 Query: 481 NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI 540 +W R EWL + +H +K+LVIC + A E L ++ GI AA+FHE ++ Sbjct: 399 --SWAT---RFEWLAQFSRAHPDEKILVICRQLAQVKDCENYLWQKHGIDAALFHEEQNL 453 Query: 541 IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI 600 IERD+AAA+FA+ + G+Q+L+CSEIGSEGRNFQF+ H+V DLP +PDLLEQRIGRLDRI Sbjct: 454 IERDKAAAYFADSEHGSQLLVCSEIGSEGRNFQFSCHLVCLDLPEHPDLLEQRIGRLDRI 513 Query: 601 GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT 660 GQ D+ +HVP+ + ++ +W+++ L E P ++D V D+ + L S + Sbjct: 514 GQTRDVHVHVPFAAHSRTALQFQWFNDVLQCVEQQNPAAGPVHDKVVADVEDDLYS--EA 571 Query: 661 EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 ++LI R Q AL+A+++ GRD LLE++S A LA I + + DT A Sbjct: 572 VLTEELISQTRAQVAALQAEIQSGRDALLEMNSCRQPFADELAAGIADFEQDTPQ-ALVE 630 Query: 721 NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE 780 D++ + + GD L PSD ML+P PG+ +G ITF+R +A RED F++W+ Sbjct: 631 TASDLLNFHFEATGDASFSLIPSDKMLIPALPGIPPEGTEITFNRALASHREDLLFMSWD 690 Query: 781 HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP 840 I +L+ D GS++++ L +K LP G L+E+ + V Q+ FL Sbjct: 691 ATFITGLWELLHHSDLGSASVATLPSKQLPAGHCLLEVCFDVVIQSRLATACLPFLTSHS 750 Query: 841 VRML-LDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSA 899 VR L LD + +L++ + E + + V +H +V + + ++ + EA E+ Sbjct: 751 VRTLVLDISDKDLSSLLPEEALQQNIQGVKKHLARDVVKSRKDEIGKWYEKAEAFAEQQQ 810 Query: 900 RALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQ-AGWRLD 958 + L+ A +A AE++RL L N + DEL A+E R V +L++ A +L Sbjct: 811 QTLLADALEQARAHFEAEITRLRNLAHNNAAVGRDELVALEERRDGVCNALEKHAHLQLS 870 Query: 959 ALRLIVVT 966 A+RLIV+T Sbjct: 871 AIRLIVIT 878 >UniRef50_Q1MY01 ATP-dependent helicase HepA n=1 Tax=Bermanella marisrubri RepID=Q1MY01_9GAMM Length = 898 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 332/973 (34%), Positives = 511/973 (52%), Gaps = 88/973 (9%) Query: 1 MP-FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGD 59 MP + GQR++S E ELGLG V + R +T+ FP + RLY+ + +P+ R F PGD Sbjct: 1 MPQYIEGQRYVSLAEPELGLGVVTGYENRQITIEFPLSETTRLYSANTTPLLRCRFEPGD 60 Query: 60 TITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQ 119 T+ + G + V +E +GL+ Y D S + E+ + P DRL +GQ Sbjct: 61 TVKTRTGEFICVSSSEEVDGLIEY---HYDGNHS---ISEIMIADDQGKVSPLDRLKSGQ 114 Query: 120 IDRMDRFALRYRA-RKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADE 178 + L + R Q R Y G G + +L+PHQ ++A V PR LLADE Sbjct: 115 LGSYKWQNLYQKLDRSMIEHQGRGSY-GFVGPKINLVPHQFDVAQQVLSMPLPRALLADE 173 Query: 179 VGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEA 238 VGLGKTIEAG+++HQ ++SG A+R+LI VP +L +QWLVEM R+FNL L DDE + + Sbjct: 174 VGLGKTIEAGLVIHQLMVSGRAQRILICVPASLVNQWLVEMRRKFNLNCTLIDDE-FCQN 232 Query: 239 QHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA 298 Q + NPF+ Q+ +C+ D+ S Q +E +WD++V+DE+H L W +A Y++ Sbjct: 233 Q-EGSNPFNQVQVALCNFDWLTHS-QYMEQALSTQWDMMVIDESHRLQWQSEA----YRS 286 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAM 358 L++ G LLLTATPEQLG+ESHFARL LLDP RF D QF+ E+K Y V++ V Sbjct: 287 ALALSKVSSGALLLTATPEQLGVESHFARLHLLDPLRFPDLEQFLNEEKQYALVSELV-- 344 Query: 359 LLAGNKLSNDELNMLGEMIGEQDIEPL----LQAANSDSEDAQSARQELVSMLMDRHGTS 414 D + M G DIE L L +D + Q+ V + DR+GT Sbjct: 345 ---------DRIEMEGLAACLADIEALDDQRLSELANDYVENGKDEQQFVDWMSDRYGTG 395 Query: 415 RVLFRNTRNGVKGFPKR--ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPER 472 R+++RNTR + GFP+R E H +K D++ + Sbjct: 396 RMVYRNTRRSIAGFPQRHIEFHHLK------------------------DQSHE------ 425 Query: 473 IYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAA 532 EWL +L S +KVL+IC +A A L + + I + Sbjct: 426 -------------------EWLKEWLESLGDEKVLIICKQAEQARDLSEFINTHTLIESG 466 Query: 533 VFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQ 592 FHEG S+IERD+ AA F E D G Q+L+ SEIG EGRNFQ A ++V++DLP +PDL++Q Sbjct: 467 AFHEGYSLIERDQIAAQFVEPD-GLQILVSSEIGGEGRNFQHAKYLVLYDLPSHPDLVDQ 525 Query: 593 RIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLIN 652 RIGRLDRIGQ DI +H+P ++ QS L YH GLD F P IY++ ++ + Sbjct: 526 RIGRLDRIGQGSDIYVHIPLQSRSEQSRLAALYHHGLDLFNQPNPAAAPIYEAYSYEIED 585 Query: 653 YLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDD 712 L + + E +I C++ L ++EQGRD+LLE HS ++ L +SI+E D++ Sbjct: 586 MLETGENAEA---VIMQCQQACFQLLDEIEQGRDKLLEQHSFSKDRVSPLLDSIKELDEE 642 Query: 713 TNLIAFAM-NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAR 771 + + A+ ++FD I+ + G V+ P ++ + E+ TITFDR A R Sbjct: 643 QDTLRHALFDIFDHSHIDIETAGAGNFVVRPGENCPFSFMNDIQEEAATITFDRNKAALR 702 Query: 772 EDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQ 831 ED +FI+W+HP +R LD + + + +L ++ L GT +VE + +A P +L+ Sbjct: 703 EDLEFISWDHPWMRGMLDDLEAAGNAYTACALFEDDKLANGTAVVECYFDFKANGPGRLE 762 Query: 832 LNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLG 891 LNR+L P R + ++ N + + E + +++ + + + L Sbjct: 763 LNRYLAPQSRRYFITEDLKNATSHLSEEDMTERFKPISKEMAREAIELKWGSIQNAAMLA 822 Query: 892 EAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLD 951 E + + I A + ++ +EL+R ++L + P E+ A+ + ++ + L Sbjct: 823 EKLAIHTTQNSIGEAVEKLLDQSKSELARYKSLEMM-PGAYQAEIDALTTRTKEAIGLLQ 881 Query: 952 QAGWRLDALRLIV 964 A +L ++ + + Sbjct: 882 NAKPQLKSITVWI 894 >UniRef50_UPI0001698444 ATP-dependent helicase HepA n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698444 Length = 555 Score = 501 bits (1290), Expect = e-140, Method: Compositional matrix adjust. Identities = 262/554 (47%), Positives = 349/554 (62%), Gaps = 13/554 (2%) Query: 277 LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 +++DEAHHL WSED PS EY +E LA + PG+LLLTATPEQLG HFARLRLLDP+RF Sbjct: 1 MIIDEAHHLAWSEDDPSPEYLLVEALALNTPGILLLTATPEQLGRAGHFARLRLLDPDRF 60 Query: 337 HDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLL-QAANSDSED 395 H F+ E++ YRP A+A+ L+ LS D + + GE++ LL +++DS++ Sbjct: 61 HSLEAFLAEEQAYRPAAEAIDRLMQRTPLSEDAQAQILDQFGEEECAKLLAMISDADSDE 120 Query: 396 AQ--SARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGI 453 AQ SAR L+ +L+DRHGT RV+FRN R G+ GFP+RE H LP P Y + Sbjct: 121 AQRESARSALIELLLDRHGTGRVMFRNNRAGISGFPEREFHGYPLPNPECYD-----AEQ 175 Query: 454 MGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKA 513 + ++SA A L PERI+ WW DPRV WL +L + K+L+ICA A Sbjct: 176 IDPQQSAPPDA--WLTPERIHAA--AGLKEWWRTDPRVSWLCRFLRENPEPKLLLICAHA 231 Query: 514 ATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ 573 TA++L++ LR EGI AA+FHEGMSIIERDRAAAWFA+ D G+++LLCSEIGSEGRNFQ Sbjct: 232 QTAIELQEALRSLEGIGAALFHEGMSIIERDRAAAWFADPDQGSRILLCSEIGSEGRNFQ 291 Query: 574 FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFE 633 FA H+V+FDLP NPDLLEQRIGRLDRIGQ +++HVPYL Q LVRWYHEGLDAF Sbjct: 292 FAHHLVLFDLPLNPDLLEQRIGRLDRIGQQQTVRVHVPYLSPGPQERLVRWYHEGLDAFH 351 Query: 634 HTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHS 693 HT P TI+ + L L + + L+ E + +L+QGRD LLE+ Sbjct: 352 HTVPGAHTIFSQLAPALQQVLEEDEAEAELEPLLAATAELRQQTAQRLQQGRDHLLELAG 411 Query: 694 NGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPG 753 A + I D + L + LF G + G N VL P++ + PG Sbjct: 412 CRQPLADQIVRQIRSLDSSSRLYEYCERLFGCFGAEVEPLG-NGFVLRPAEQISNNRLPG 470 Query: 754 LSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGT 813 L +DG+T+TFDR ALA ED QF+TWEHP++R + ++S ++G+S+ L++ + G Sbjct: 471 LPDDGLTLTFDRADALAHEDRQFLTWEHPMLREAMQQVISQESGNSSAIALRHPEMKPGQ 530 Query: 814 LLVELIYVVEAQAP 827 LL+E ++ +E AP Sbjct: 531 LLIEALFQIECIAP 544 >UniRef50_A4BDR8 Superfamily II DNA/RNA helicase, SNF2 family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BDR8_9GAMM Length = 883 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 333/967 (34%), Positives = 496/967 (51%), Gaps = 97/967 (10%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRW+ D+E ELGLG V +VDAR V L FP + R YA D+P+TR + G+T+ Sbjct: 4 FVQGQRWLVDSEPELGLGMVQSVDARAVLLYFPDSDTERQYALRDAPLTRYTLDVGETLD 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 D + + V NGL+ Y T D + + E L K+ + P RL GQ D Sbjct: 64 HRDQGEKTIAVVHSMNGLIVYETT--DQQ----MVPETELADKVKRNNPMVRLLTGQTDH 117 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 + FA R + +GL G R++L+PHQL +A R LLADEVGLG Sbjct: 118 PNWFAFRSALNSGIQAIWSTHLNGLLGTRSTLLPHQLYVARSATEHSHVRALLADEVGLG 177 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTIEAG+I+++ G R+LI VP LQ QWLVE++RRF+L F E Y +HD Sbjct: 178 KTIEAGLIINRLRQQGRIRRILIAVPPALQAQWLVELIRRFSL-FC----EMYQGPEHD- 231 Query: 243 YNPFDTEQL-VICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 F Q+ +I + S++ L H+ E +WD+LVVDEAHHL + +A + Q Sbjct: 232 ---FAIGQVHLITHTELT--SEETLAHISEQDWDMLVVDEAHHL--NTEADEADSLHWSQ 284 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLA 361 A +P +LLLTATPEQLG +SHF RL+LLD RF F Q+ ++ ++ + D +A L Sbjct: 285 FARQLPHLLLLTATPEQLGQQSHFGRLQLLDAGRFASFEQYQADEASFADLTD-IARALN 343 Query: 362 GNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT 421 N+++ D + Q +E L + +D+ A SA L+DRHGT RV++RNT Sbjct: 344 ENQVTPDVI---------QQLESLGISWQNDAHQALSA-------LLDRHGTGRVVYRNT 387 Query: 422 RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDN 481 R GV GF +R Q +++ F D+ Sbjct: 388 RKGVSGFHRR-------------QADLEL--------------------------FASDS 408 Query: 482 ATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSII 541 RV+ L +L ++R +KVL+I TA L L G+ A FHE + +I Sbjct: 409 -------DRVKALAQWLKTNRDEKVLLIAHDKETAKSLAYELWHDFGVDATSFHEDLDLI 461 Query: 542 ERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 ERDRAAA FA+ D GA +L+CSEIG EGRNFQF H++++D+P +PD LEQRIGRLDRIG Sbjct: 462 ERDRAAAHFADVDDGAHILVCSEIGGEGRNFQFCHHLILWDIPSHPDSLEQRIGRLDRIG 521 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 Q I IH L+ + +WYH+ L E + P TI++ D Sbjct: 522 QTQTIGIHAYLLQNSDDQRRYQWYHDLLGCVEQSQPAAGTIHEQFAEDWF--------AR 573 Query: 662 GFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIE--EQDDDTNLIAFA 719 G D L + R+Q L QLEQGRD LLE++S +A + IE EQ+ +++ A Sbjct: 574 GDDALADSIRKQMRELTEQLEQGRDILLELNSCRQPEADNIRNQIETLEQNHPLSVVEMA 633 Query: 720 MNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITW 779 NL + ++ + + + L PS +ML+P PG+ E G +TFDR++A RED F++W Sbjct: 634 ANLLN---LHFESIANGIYELIPSSNMLIPVLPGIPEGGAVVTFDRQIASQREDTLFLSW 690 Query: 780 EHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPT 839 EHP I+ D++ + G ++I+LL+++ +P G LL+E+ + V L L Sbjct: 691 EHPFIQGLADMLQGSELGQASIALLESEQVPAGQLLMEVQWSVSVPERLTHALKPHLNTA 750 Query: 840 PVRMLLDKNG-NNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKS 898 R L+ + G +L+ + + Q+ + K++ ++ + + + + E Sbjct: 751 LFRTLVLEGGVKDLSGVLSEDALQAQIKTLPVKIARKMIREAKERISPLYETSQTLAEDR 810 Query: 899 ARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLD 958 ++ R A + R+ L +VNP + ++ ++ E+L Q + Sbjct: 811 FNTALEETRASLVAANQARVERMSYLASVNPIVTQADVEKLKIQTLLEEEALSQCEFSTS 870 Query: 959 ALRLIVV 965 +RLI+ Sbjct: 871 GVRLILC 877 >UniRef50_C9RJU1 Helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJU1_FIBSS Length = 995 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 340/1028 (33%), Positives = 515/1028 (50%), Gaps = 97/1028 (9%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F +GQR++S E LGLG V V RTV +LFPS G+ R+Y ++P+ R + G+T Sbjct: 1 MMFKIGQRYVSQAEPTLGLGIVSEVQGRTVKILFPSIGQARIYRTDEAPIERFVLQVGET 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 + S G V+ V+E+ G++ Y+G +G ++E L +K+ ++P A Sbjct: 61 VKSEKGVSFVVDSVREDAGIMVYVG------RNGKEMKESELSAKISTARPAVLFKALAD 114 Query: 121 DRM--DRFALRYR-ARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHA-PRVLLA 176 D + R LR+ A + + P G+ G R ++IPHQ + + PR++L+ Sbjct: 115 DEVCSSRDFLRHEDAMEMYYKWISSPVRGMIGPRVNMIPHQYYLCYRACSSSTLPRLMLS 174 Query: 177 DEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA 236 DEVGLGKTIEAGMI H G +R L+IVPETL+HQW++EM RRFN F L D E Y Sbjct: 175 DEVGLGKTIEAGMIWHALKSRGRIQRTLVIVPETLKHQWMIEMKRRFNQLFTLVD-EGYI 233 Query: 237 EA-------QHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSE 289 NPF +I S+DF +E L + WD+ ++DEAHHLV + Sbjct: 234 RGLFVGVAKDETKPNPFMQSNDIIVSIDFLMAQPALIEDLLKTNWDMTIIDEAHHLVCED 293 Query: 290 DAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY 349 S EY ++ GVLLLT TP QL ES F RL++LDP RF D+ F+++Q+ Y Sbjct: 294 GFTSHEYMLANRVIGRSKGVLLLTGTPLQLHPESQFNRLKMLDPVRFADYNDFIKDQEAY 353 Query: 350 RPVADAVAMLLAGNKLSND-----ELNMLGEMIGEQD-IEPLLQAANSDSEDAQSARQEL 403 + ++ NKL D + L E + + I P L+ NS S A E Sbjct: 354 ------LKLVRDLNKLPTDPNHHMSWDDLYECVPKNSQIRPWLEQENSKSMTAG----EW 403 Query: 404 VSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDR 463 + ++D GT V+FRNTR GV GFPKR L I L Y+ + V+ S + + Sbjct: 404 MRRIVDGMGTGSVVFRNTRKGVGGFPKRVLDEIPLEPNPAYREMVDVAADRDLEASTDIQ 463 Query: 464 ARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVL 523 +L + W D R WL G+L ++++KVL+IC LE +L Sbjct: 464 ENGLLCTRF---------SDAWAMDERFVWLKGFLKEYKNEKVLLICESIQVVQALETLL 514 Query: 524 REREGIRAAV-FHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFD 582 E G A V FHE MSI+ RD+AAA F++ D GA +L+ SEIGSEGRNFQF+ H+V+FD Sbjct: 515 LEFLGEGAFVMFHEDMSIMARDKAAANFSKPD-GANLLIASEIGSEGRNFQFSHHLVLFD 573 Query: 583 LPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI 642 LP + L+EQRIGRLDRIGQ DI IHVPY++ + Q V+ RWY+EGL++F +G + Sbjct: 574 LPLDAALVEQRIGRLDRIGQDKDIIIHVPYVKGSGQEVMFRWYNEGLNSFGAPLMSGGEL 633 Query: 643 YDSVYNDLINYLASPDQT-EGF-DDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 + LI LA+P + E F +++I ++ E ++ +E GRDRLLE +S EKA+ Sbjct: 634 FLKYTESLIEALATPRASLENFVENVIPQVKKDCEQMRKHIENGRDRLLEFNSRNPEKAK 693 Query: 701 ALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRG-DNMIVLTPSDHMLVPDFPGLSE--- 756 + + I E D + L + G++ + + ++T + PG+ + Sbjct: 694 EITDEIRELDAEPELKNLVFDSLMNRGLDVEKSSVQDCFLITMGPQVEAGSVPGMPDLAM 753 Query: 757 ---------------------------------DGITITFDREVALAREDAQFITWEHPL 783 +T+TFDR+VA+ +D +FI+ +HPL Sbjct: 754 AAATAGGGRVNSQTDLCGEGGGDGDGDGRVSGGTCMTVTFDRDVAMTHDDIEFISLDHPL 813 Query: 784 IRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRM 843 + D S G+ + ++ N L L+++ + VE ++ P ++ Sbjct: 814 AQGVFDYETSFGRGTVSCAIWPNSGL--RGLMMQYNFAVELPVSEEWGCADIAGPKYFKV 871 Query: 844 LLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVN-AVQQDVHAILQLGEAQ----IEKS 898 L++ G N++ E F +A + G N AV + + G A+ + + Sbjct: 872 LVNAKGENMS-----EHFEDLSDAALKDVGVPQGNAAVDMTLRYFAKDGLAKARLIVSEQ 926 Query: 899 ARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDE-LTAIESNRQQVMESLDQAGWRL 957 A+ + A N + + E R+ L ++ E L + N Q+ + + RL Sbjct: 927 AKKYAEEAANAVEARSEQEYQRMNHLLSMRGKAGTSEALKQLRKNVQERKKIVANPQLRL 986 Query: 958 DALRLIVV 965 DA+RL+V Sbjct: 987 DAIRLVVC 994 >UniRef50_D2YSY0 RNA polymerase-associated protein rapA n=1 Tax=Vibrio mimicus VM573 RepID=D2YSY0_VIBMI Length = 253 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 135/252 (53%), Positives = 199/252 (78%) Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQ 775 + FA++LFD IG++Q+DRG+N +V+TP++HM+VP +PGL +G TITFDR+ AL+RED Sbjct: 1 MTFALSLFDAIGLHQEDRGENALVVTPAEHMMVPSYPGLPYEGATITFDRDTALSREDMH 60 Query: 776 FITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRF 835 FI+WEHP+++ G+DL++S G+ +SLLKNKALPVGT+L+EL+YVV+AQAPK+ ++RF Sbjct: 61 FISWEHPMVQGGIDLLMSEGVGTCAVSLLKNKALPVGTILLELVYVVDAQAPKRSGISRF 120 Query: 836 LPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQI 895 LP +P+R+L+D GN+L++QVEFE+FNRQL+ VNRH SKLV++VQ DVH ++ EA + Sbjct: 121 LPVSPIRILMDARGNDLSSQVEFESFNRQLSPVNRHLASKLVSSVQHDVHRLITASEAAV 180 Query: 896 EKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGW 955 E A+ + A+ + + L++EL RL AL+AVNPNIRD+E+ +E +++ + QA + Sbjct: 181 EPRVSAIREQAQRDMQQSLNSELERLLALKAVNPNIRDEEIEVLEQQIKELTGYIAQAQY 240 Query: 956 RLDALRLIVVTH 967 +LD+LRLIVV H Sbjct: 241 QLDSLRLIVVAH 252 >UniRef50_Q08VX8 Type III restriction enzyme, res subunit family n=3 Tax=Cystobacterineae RepID=Q08VX8_STIAU Length = 1102 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 264/904 (29%), Positives = 390/904 (43%), Gaps = 123/904 (13%) Query: 14 ESELGLGTVVAV--DARTVTLLFPSTGENRLYARSDSPV---------TRVMFNPGDTIT 62 + E G+G + A+ + + FP AR D+PV G+ + Sbjct: 106 QPEWGVGHLAALMEEGAKAVVFFP--------AREDAPVLVSTKGSALVAYALPAGEPVV 157 Query: 63 SHDGWQMQVEEVKEE---NGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFA-- 117 + G V V EE GL Y+ DT E + +S+L P+ L + Sbjct: 158 TVKGRAATV--VSEEPGARGLRRYVIRYTDTGEE-----DEMPESELRALPPRSDLLSTL 210 Query: 118 --GQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLL 175 G++ F LR +A E+ L R + PHQ+ + V PR +L Sbjct: 211 REGRVGDAKAFTLRKQALVLDDERRCDALGALLASRVMVKPHQVGVVQRVLSARRPRFVL 270 Query: 176 ADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY 235 ADEVGLGKTIEAGM+ L+G A RVL++ P L QWLVE+ +FN F L D +RY Sbjct: 271 ADEVGLGKTIEAGMVFSALRLAGLARRVLVVAPSHLTVQWLVELFHKFNQLFTLMDSDRY 330 Query: 236 AEA--QHDAYNPFDTEQLVICSLDFARRSKQRLEHLC--EAEWDLLVVDEAHHLVWSEDA 291 A++ + +P++ LV+ SL+ R+++ + EA WDL+++DEAHHL Sbjct: 331 AQSLKEQPDVSPWERFPLVVTSLELLSRTEEHRRAVAADEAFWDLVIIDEAHHL-----K 385 Query: 292 PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRP 351 + ++A + LAE+ G+LLLTATP QL + L L+D F E Sbjct: 386 GEKAFEAAQGLAENSWGLLLLTATPMQLDPAEYHGLLTLIDAATAPTVKGFEERLARQEE 445 Query: 352 VADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRH 411 ++ AV LL G + ++ + G+ ++ L R L+ L + + Sbjct: 446 LSSAVRALLEGGEPASAVKALAKRFPGDAKLQGL------------KDRDALLEHLAETY 493 Query: 412 GTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQ----YQTAIKVSGIMGARKSAEDRARDM 467 S L RN R V GF R LH + L + A+ V + GA A M Sbjct: 494 SLSDRLVRNRRAVVGGFSSRRLHRHPVQLSAEELKTRDAALAV--LAGASLRGAPLANVM 551 Query: 468 LYPERIYQEFEG----------DNATWWNFDPRVEWLMGYL----TSHRSQKVLVICAKA 513 E F G N D ++ +G L R KVLV Sbjct: 552 RRLESSPSAFAGAVSANPALKAANLKLPARDAKLNAFLGVLRGIWAQEREAKVLVFTESR 611 Query: 514 ATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ 573 T L+ Q REGI A +H + ++ERDR A F + + G QVLLC+E+G EGRNFQ Sbjct: 612 DT-LEALQAELGREGIEALGYHGDLPLVERDRQVARFRDPE-GPQVLLCTEVGGEGRNFQ 669 Query: 574 FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFE 633 FA H+V +DLP++P +EQRIGRLDRIGQ+ ++IHV T S ++ + + F Sbjct: 670 FAHHLVHYDLPWSPATVEQRIGRLDRIGQSKPVEIHVFDPAGTLASDVLMLLADAVGVFG 729 Query: 634 HTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHS 693 T + + V + L P E + + EA +AQ+++ D LL++ S Sbjct: 730 ETVGGLDAVLEEVEDRLAELALLP--REARVAYAAELKAKVEAARAQVKRAYDPLLDLRS 787 Query: 694 NGGEKAQAL-----------------AESIEE------QDDDTNLIAFAMNLFDIIGI-- 728 + L AE +E+ +D D L L +GI Sbjct: 788 FDKPAVERLVTRAQTRMGIEVDEDEEAEPLEDGLWGVARDLDERLEESVTELAKRVGIRV 847 Query: 729 NQDDRGDNMIVLTPSDHML-VPDFPGLS--EDGITI-TFDREVALAREDAQFITWEHPLI 784 + DD D H L V PGL ED + TF R+ A+ E+ ++ H L+ Sbjct: 848 DTDDEVDAFQCAFHFGHALNVEGLPGLDVMEDRTVLGTFWRDTAVEAEELEYFATGHSLV 907 Query: 785 RNGLDLILSGDTGSSTISLLKNKALPVGTLL---VELIYVVEAQAPKQL---------QL 832 + G G S ++ + GTL +E +Y V+ P+ QL Sbjct: 908 EALFGFLRDGPYGRSGFRFIEKR----GTLKAKGLEFLYHVQLPEPEDTSPGARVPSRQL 963 Query: 833 NRFL 836 RFL Sbjct: 964 ARFL 967 >UniRef50_UPI0001698443 ATP-dependent helicase HepA n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698443 Length = 292 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 118/233 (50%), Positives = 152/233 (65%), Gaps = 3/233 (1%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRWISDTESELGLG+VV ++ RTVTL F ++ R+YA +++P+TR+ F+ GD + Sbjct: 4 FIPGQRWISDTESELGLGSVVKLEGRTVTLRFEASDATRVYASANAPLTRIRFDSGDQVE 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 G + + V E+ GLL Y + D L E L L F+KP+DRL GQ+D Sbjct: 64 DQQGEALHITSVSEQQGLLIYSVRQQDGNTR--QLPESELSHYLRFNKPRDRLLTGQLDA 121 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 F LRY + + ++ GL+G R LIPHQL IAH+V RHAPRVLLADEVGLG Sbjct: 122 NHWFELRYHSLHHQAQLAESANYGLQGARIDLIPHQLYIAHEVAGRHAPRVLLADEVGLG 181 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPET-LQHQWLVEMLRRFNLRFALFDDER 234 KTIEA +ILHQQL+SG R LI+ T +WLVE+LRRFN F++FD+ER Sbjct: 182 KTIEACLILHQQLISGRTNRALILGALTACCTKWLVELLRRFNRHFSIFDEER 234 >UniRef50_A4IQV6 Helicase, Snf2/Rad54 family n=11 Tax=Bacillaceae RepID=A4IQV6_GEOTN Length = 554 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 135/507 (26%), Positives = 237/507 (46%), Gaps = 78/507 (15%) Query: 144 YSGLRGQR----TSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGA 199 ++GL+ + +++PHQL +A V + +LADEVGLGKTIEAG++L + ++ G Sbjct: 46 FNGLQAPKHLPHLTILPHQLEVARRVVEEMNGKAILADEVGLGKTIEAGLVLKEYMIRGL 105 Query: 200 AERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFA 259 ++ LI+VP +L QW+ E+ +F + A+ + Y Q D +V+ S+D A Sbjct: 106 VKKALILVPASLVSQWVKELNEKFFIP-AVQQKKSYVWEQCD---------IVVSSIDTA 155 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 ++ R + + E +D++++DEAH L ++ ++ Y+ ++ L + LLLTATP Q Sbjct: 156 KKPPHR-DIIYEQPYDMIIIDEAHKL---KNNKTKNYEFVQNLKKKF--CLLLTATPIQN 209 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVA--DAVAMLLAGNKLSNDELNMLGEMI 377 +E F + LL P + QF + R V D + L+ + N + E Sbjct: 210 RIEEIFNLVSLLKPGHLGNAEQFAKTYGKTRAVQTNDHLKALVNKVMIRNRRADTPIEW- 268 Query: 378 GEQDIEPLL-----------QAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVK 426 ++ +EP+L +A + ++ + L+++L + + LF +N + Sbjct: 269 SKRHVEPVLIEFTDEERELYEAVKALRHESFAGSFSLITLLREACSSREALFLTIKNMID 328 Query: 427 GFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWN 486 K G + PE + E NA N Sbjct: 329 ----------------------KCEGAV---------------PEALEHVLEKINAVTTN 351 Query: 487 FDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRA 546 + E + + S + KV++ AT L L+ L++ GI + F G ++D Sbjct: 352 --SKAEKALELIRS-INDKVIIFTEYRATQLYLQWFLKQH-GISSVPFRGGFRRGKKDWM 407 Query: 547 AAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 F AQV + +E G EG N QF +++ +DLP+NP LEQRIGR+ R+GQ D+ Sbjct: 408 QELF---KNHAQVFIATEAGGEGINLQFCRYVINYDLPWNPMRLEQRIGRVHRLGQTDDV 464 Query: 607 QIHVPYLEKTAQSVLVRWYHEGLDAFE 633 I+ +++T + ++ +E + FE Sbjct: 465 HIYNFAVKQTVEEHILTLLYEKIRLFE 491 >UniRef50_B9LVT7 Helicase domain protein n=2 Tax=Halobacteriaceae RepID=B9LVT7_HALLT Length = 584 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 158/570 (27%), Positives = 255/570 (44%), Gaps = 86/570 (15%) Query: 152 TSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 L+ HQ++ A+ + LLADEVGLGKTIE GMIL + E VLI+ P L Sbjct: 61 VKLLEHQVDAAYRALFEMDGKALLADEVGLGKTIEVGMILKEMHFRETDESVLILTPAQL 120 Query: 212 QHQWLVEMLRRFNLRFAL-FDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLC 270 QW E+ +F L F +DDE + FD +I S+D A+ + R + + Sbjct: 121 AKQWQAELREKFGLDFVCNYDDE---------FEDFDAHDYIIASIDTAKSERHR-QTVL 170 Query: 271 EAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRL 330 + +WD+LV+DEAH++ ++ + Y I++L+ + LTATP Q + + + L Sbjct: 171 DRDWDVLVLDEAHYV---KNEETDRYDLIDRLSYNYA--FFLTATPIQNELTDLYNVVSL 225 Query: 331 LDPNRFHD---FAQFV-----EEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDI 382 L P F F Q+ E N + D + ++ N+ +++ I + Sbjct: 226 LRPGLFGTRDVFHQYFVNSNQETLVNRDELQDRLNKVMIRNRREETDIDFTDRTIDTRTF 285 Query: 383 EP------LLQAANSDSEDA--QSARQELVSMLMDRHGTSR-VLFRNTRNGVKGFPKREL 433 +P L QA + + A Q Q+LV ML+ + S V + T KR Sbjct: 286 DPTPKERELYQAVSDYVKGAYSQDQGQKLVLMLLQKEVVSSPVALKET------IEKRLY 339 Query: 434 HTIKLPLPTQYQTAIK-VSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVE 492 +L + ++ + + I K ++R D++ R E Sbjct: 340 EQSELTHADELESILDLIEDIDTVTK--QERLLDIVEEARETVE---------------- 381 Query: 493 WLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAE 552 MG +V+V AT Q+ L EG FH G S E+++ F E Sbjct: 382 --MG--------RVIVFTQFRATQRQVLDRLA-SEGYTVHAFHGGHSSSEKEQIVEDFEE 430 Query: 553 EDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPY 612 E +L+ ++ SEGRN QF + +V L +NP +EQRIGR+ RIGQ D+ + Sbjct: 431 E---GGILVSTDAMSEGRNLQFCNLLVNLGLSWNPMRMEQRIGRVHRIGQKRDVFVFNMA 487 Query: 613 LEKTAQS-VLVRWYHEGLDAFEHTC-----------PTGRTIYDSVYNDLINYLASPDQT 660 L+ T + VL R YH+ +D F+ + +G + D +++ L+N + D Sbjct: 488 LKGTVEEYVLERLYHK-IDLFQQSVGELSSILSRLEESGTSFEDQIFDRLVNADSEVDLE 546 Query: 661 EGFDDLIKNCREQHEALKAQLEQGRDRLLE 690 FD + + +EQ E L +LE+ + + E Sbjct: 547 NDFDAMAVDLQEQRE-LADKLEEFNNGVFE 575 >UniRef50_A7HSB4 Helicase domain protein n=6 Tax=Bacteria RepID=A7HSB4_PARL1 Length = 941 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 163/532 (30%), Positives = 244/532 (45%), Gaps = 102/532 (19%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQL + + R LLADEVGLGKTIEAG++L + L G +R+L++ P+ L Q Sbjct: 95 LPHQLYALNRAVGQDRIRYLLADEVGLGKTIEAGLVLRELKLRGRVKRILVVAPKGLVRQ 154 Query: 215 WLVEMLRRFNLRFALFDDERYA--------EAQHDAYNPFDTEQLVICSLDF-----ARR 261 W EM + F D A A+ +A+ D VIC+LD +RR Sbjct: 155 WQAEMRQHFGEPLHFVDPSSLAALRQWRGDSAEDNAWRMHDQ---VICALDSVKPLESRR 211 Query: 262 ----------SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLL 311 +++R E L A WDL+++DEAH + S + +R Y+ LAE P +LL Sbjct: 212 GWSLDQIQTYNRERFEDLVSAAWDLVIIDEAHRMGGSTEQVAR-YKLGAALAEASPYLLL 270 Query: 312 LTATPEQLGMESHFARL-RLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDEL 370 L+ATP Q G F RL +LLD + F D E+ ++ K + + Sbjct: 271 LSATPHQ-GKTDQFMRLMQLLDRDAFPDEGSVSHERVQ--------PFVIRTEKRA--AI 319 Query: 371 NMLGEMIGEQDIEPLLQAANSDSEDAQ-SARQELVSMLMD--RHGTSRVLFRNTRNGVKG 427 N G+ + P L ++ + A+ +A+Q+L + D RHG ++ L R+ G Sbjct: 320 NAEGQPL----FRPRLTRLHAVAWQARHAAQQQLYEAVTDYVRHGYNQALAAKQRH--VG 373 Query: 428 FPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAED------RARDMLYPERIYQEFEG-- 479 F L + L T AI+ + + R++ D R D L P+ + + +G Sbjct: 374 F----LMILMQRLVTSSTAAIRAT--LEKRQAVLDTPQTQARLFDTLSPDE-WADLDGEA 426 Query: 480 --DNATWWNF----DPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG---IR 530 D A N VE L+ RS + AKA + L+L L++ EG ++ Sbjct: 427 QVDLALQANGLELEKSEVETLLAL---ARSTEAAGTDAKAESLLELIYKLQQEEGDPALK 483 Query: 531 AAVFHE------------------------GMSIIERDRAAAWFAEEDTGAQVLLCSEIG 566 VF E GM + R R FA + A+VL+ ++ G Sbjct: 484 VLVFTEFVPTQAMLADYLESRGFTVATLNGGMDMEARTRTLQTFAGD---ARVLISTDAG 540 Query: 567 SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ 618 EG N QF +V FD+P+NP +EQRIGR+DRIGQ H ++ LE T + Sbjct: 541 GEGLNLQFCHVIVNFDMPWNPMRIEQRIGRVDRIGQKHVVRALNFVLEDTVE 592 >UniRef50_A7H7X7 Type III restriction protein res subunit n=4 Tax=Anaeromyxobacter RepID=A7H7X7_ANADF Length = 905 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 127/376 (33%), Positives = 171/376 (45%), Gaps = 23/376 (6%) Query: 66 GWQMQV-EEVKEENGLLT--YIGTRLDTEESG--VALREVFLDS---KLVFSKPQDRLFA 117 GW + V +V EE L + G T SG AL EV D+ K P D L + Sbjct: 22 GWGVGVIVQVAEEGRRLAVRFAGREGITVVSGRDSALVEVPADTPIEKAAAGGPLDALAS 81 Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLAD 177 G+ FALR R + + + L R ++PHQ+ A + PR +LAD Sbjct: 82 GEQGAATAFALRTRVSRLEALRRADSLGALLSSRVHVLPHQVGAAGRILSDRLPRFVLAD 141 Query: 178 EVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAE 237 EVGLGKT+EAG++ G AERVL++VPE L QWL E+ +FN F+L ER A Sbjct: 142 EVGLGKTVEAGLVFAGMRQLGIAERVLVVVPEHLAFQWLAELFHKFNALFSLLTPERIAA 201 Query: 238 AQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQ 297 + I S + R + + +DLLVVDEAHHL +EDA + Sbjct: 202 LGGAEAALARSPH-AIVSFEALRDDPDLADVAADIPFDLLVVDEAHHL--AEDA---LHA 255 Query: 298 AIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVA 357 A+ L GVLLLTATP +L +F L L++P +F+ + + A+ Sbjct: 256 AVAPLCRAAYGVLLLTATPVRLDPREYFRLLSLVEPVPSTTLDEFLARLEQHEAYAEVAR 315 Query: 358 MLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVL 417 LLAG E LG + + L ED R L++ L DR+ S L Sbjct: 316 TLLAGGS----EAEALGALRALAPGDELFT-----REDPVPDRLTLLAHLADRYSLSARL 366 Query: 418 FRNTRNGVKGFPKREL 433 RN R V F R L Sbjct: 367 IRNRRVKVGAFTSRVL 382 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 103/362 (28%), Positives = 167/362 (46%), Gaps = 47/362 (12%) Query: 527 EGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFN 586 EG+ A ++ + S+ RDR A F + + G VLL E G EGRNFQFA +V DLP + Sbjct: 430 EGLEALLYDDAPSLEGRDRLVARFRDPE-GPMVLLSGESGGEGRNFQFACQLVCADLPES 488 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHE----------GLDAFEHTC 636 P +LEQRIGRLDR+GQ ++IH+ +E ++ L Y + GLDA + Sbjct: 489 PLVLEQRIGRLDRLGQHRPVEIHL-VVEPGEEAFLADLYEKEIGIFEEPVGGLDAVLASL 547 Query: 637 P----------TGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGR- 685 P T RT ++ DL +A+ + + D + + R A+L +G Sbjct: 548 PEELEALRRKRTDRT-REAFRKDLAERVATARRAQHEGDPLLDIRSAALPDLARLVKGAF 606 Query: 686 DRLLEIHSNGGEKAQALAESIEE------QDDDTNLIAFAMNLFDIIGINQDDRGDNM-- 737 R+ E G E + E++E+ + + L ++ IG+ D N+ Sbjct: 607 GRMGEEVPEGIEGPRVSGEAVEQSLVTLSRWLEEELEEVTTDVGQRIGMEVDT-DQNVHP 665 Query: 738 --IVLTPSDHMLVPDFPGL--SEDGITI--TFDREVALAREDAQFITWEHPLIRNGLDLI 791 + T M + PG+ E+ +T ++ RE A+AR++ Q+ H L+ + L+ Sbjct: 666 FEVAFTLGSGMRIEALPGMEMPEEPVTYLGSYWRETAVARDELQWFATGHKLVEALVGLV 725 Query: 792 LSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAP-------KQLQLNRFLPPTPVRML 844 GD G S +L + A G L V + + A Q +R+L +PV +L Sbjct: 726 RDGDAGRSA-ALKREWAPRRGGLYVRFEPRLASSADLAPGARVASRQASRYLDLSPVSVL 784 Query: 845 LD 846 ++ Sbjct: 785 VE 786 >UniRef50_B0TFG6 Helicase (Snf2 family) protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TFG6_HELMI Length = 537 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 137/494 (27%), Positives = 219/494 (44%), Gaps = 56/494 (11%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQ++ A R +LADEVGLGKTIEAG+ L + L G + LI+ P+ L Q Sbjct: 47 LPHQIDAAWRALYPMGGRAILADEVGLGKTIEAGIFLKELQLRGQLNKTLILTPKNLTGQ 106 Query: 215 WLVEMLRRFNLRFALFDDER-YAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAE 273 W EM +F F + ++R Y H PF V+ S+D A+RS + + + Sbjct: 107 WASEMRNKFG--FPCWVNKREYGWHWH----PF-----VVASIDLAKRSPH-ADIIRQIP 154 Query: 274 WDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDP 333 +D +++DEAH L ++ S YQ + +LLLTATP Q ++ F + LL P Sbjct: 155 YDAVIIDEAHRL---KNPRSSNYQFARTINSK--NLLLLTATPVQNDLKELFHLVDLLRP 209 Query: 334 NRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS 393 F +FA F + L G + D + ++ + +L + ++ Sbjct: 210 GYFGNFADF-------------QSAFLRGKREPKDPREL------QEILSGVLIRHHRET 250 Query: 394 EDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGI 453 + ++ + + +D R L+ ++G +R K L S Sbjct: 251 CAVKLPKRHVHLLPIDLTEPERELYNAVIQYLRGEFRRRKKNRKSTLSLLILLREICSSS 310 Query: 454 MGARKSAEDRARDMLYP--ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICA 511 A + E + L P RI Q +G T +L +R +KV++ Sbjct: 311 FAALGTIEQMGLEELVPLARRIRQNAKGHVVT------------EFLKQNR-EKVVIFTE 357 Query: 512 KAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRN 571 T L L + GI V+H G+ R F + D VL+ +E G EG N Sbjct: 358 YFQTMDYLSLHL-QAAGIPVLVYHGGLGRWTRAMTQHQFQKSDV--PVLISTESGGEGIN 414 Query: 572 FQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDA 631 QF S ++ +DLP+NP +EQRIGR+ R+GQ+ D+ ++ T + ++R E ++ Sbjct: 415 LQFCSQVINYDLPWNPMRVEQRIGRVHRLGQSRDVHVYNLSTRGTIEEQMLRLLSEKIEM 474 Query: 632 FEHTC-PTGRTIYD 644 F T P R +Y Sbjct: 475 FAQTIGPIERILYS 488 >UniRef50_A9B2A6 Helicase domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B2A6_HERA2 Length = 669 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 150/550 (27%), Positives = 241/550 (43%), Gaps = 59/550 (10%) Query: 104 SKLVFSKPQD----RLFAGQIDRMDRFALRYRARKYS-----SEQFRMPYSGLRGQRTSL 154 +L F P D RL +G + DR+A+R +A Y+ + Y+ + + Sbjct: 89 GELRFRPPTDGERARLLSGHVTPADRWAVREQAEHYTLKGGFDHLLSLEYAAIDAKE--- 145 Query: 155 IPHQLNIAHDV-GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 +QL V G H +LADEVGLGKTIEAG+I+ + L LI+ P L Sbjct: 146 --YQLRAVRRVLGEMHG-NAILADEVGLGKTIEAGLIIKEYHLREMIRTCLILTPAPLSE 202 Query: 214 QWLVEMLRRFNLRFA-LFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEA 272 QWL EM +F + F L DD A+ LV+ S+D A+ + ++ L + Sbjct: 203 QWLEEMHDKFGMNFHRLGDDSDIAQY-----------PLVVGSIDRAKGAYRKA--LTDR 249 Query: 273 EWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLD 332 WD+LV+DE H L ++ + Y+ + L LLL+ATP Q + + + + Sbjct: 250 TWDMLVIDECHML---KNHRTGRYKFVFNLNR--KHCLLLSATPVQNELRELYNLITVAR 304 Query: 333 PNRFHDFAQ----FVEEQKNYRPVADAVAML---LAGNKLSNDELNMLGEMIGEQDIEPL 385 P Q F+E++++ R V A+L + N+ SN + +I +IE Sbjct: 305 PGHLKGPRQFQKLFMEDRRHARNVEHLRALLNEVMIRNRRSNTLTELPPRLIHHHEIE-- 362 Query: 386 LQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQ 445 D D A + R+ ++ ++ V + L T Sbjct: 363 ---LTDDEHDFHDAMVRFCKHIYQRYVEGDIVLQSIDGKVVVSKLVLVLMTLLKEMTSSP 419 Query: 446 TAI--KVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRS 503 A+ + G M AR D A D ER+ + + + L+ + + S Sbjct: 420 RAVGHTLRGAMSARLGKMD-AADNGELERLLKIVDE-----MQIPSKARTLLKIIKNDDS 473 Query: 504 QKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCS 563 K++V AT L L + G+ + +FH G+S +++ A F D AQV L + Sbjct: 474 -KIIVYTEFVATLEFLRDFLVD-HGVESVLFHGGLSGMQKRNAVERF--RDGKAQVFLST 529 Query: 564 EIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVR 623 E G +G N QF +V +DLP+NP +EQRIGR+ R GQ ++I+ L T + ++ Sbjct: 530 ESGGQGLNLQFCHRLVNYDLPWNPMRIEQRIGRVHRYGQERPVEIYTLILRGTIEEYILH 589 Query: 624 WYHEGLDAFE 633 +D F+ Sbjct: 590 VLTGKIDMFQ 599 >UniRef50_C7HAN1 ATP-dependent helicase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAN1_9FIRM Length = 961 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 123/466 (26%), Positives = 217/466 (46%), Gaps = 44/466 (9%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +P+QL+ A +R R+L+AD VGLGKT+EAG+++ + + G +R+L++ +++ Q Sbjct: 119 MPYQLDPAKLSLQRPRQRILIADTVGLGKTLEAGILMSELIARGKGKRILVVTVKSMMTQ 178 Query: 215 WLVEMLRRFNLRFALFDDERYAEAQH---DAYNPFDTEQLVICSLDFARRSKQRLEHLCE 271 + EM RF + D R + + YNPF I S+D +R + HL + Sbjct: 179 FQKEMWNRFTIPLVRLDSNRIQKIRASLPSNYNPFFYYDKTIVSIDTLKRDVEYRTHLEK 238 Query: 272 AEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLL 331 A WD++V+DEA ++ D ++ + + LA +++L+ATP +S + + +L Sbjct: 239 AYWDIIVIDEAQNVAERGDHQAQRSRLAKLLANRSDTMIMLSATPHDGRAKSFASLMNML 298 Query: 332 DPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANS 391 DP D +NY P D + + + +D N + E+ + A++ Sbjct: 299 DPTAIAD-------PENYTP-EDIRGLCI--RRFKSDVKNQVNGSFLERQVTLEHCHASA 348 Query: 392 DSEDAQSARQEL-VSMLMDRHGTSRVLFRNT-RNGVKGFPKRELHTIKLPLPTQYQ--TA 447 E A E+ + M + +S LF+ + + P +I+ L Y+ TA Sbjct: 349 QEEYAFDLLAEMQLEMDAGKAKSSGRLFKTSLEKSLFSSPAACRKSIEARLKKLYKKYTA 408 Query: 448 IKVSGIMGARKSAE-DRARDMLYPERI--YQE----FEGDNATWWNFDPRVEWLMGYLTS 500 +S I R E A + PE YQ+ D+ W DP Sbjct: 409 DDISDI---RLLEELHTALGQVTPENFTRYQKLLELLRSDSYGWNPKDP----------- 454 Query: 501 HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHE---GMSIIERDRAAAWFAEEDTGA 557 +V++ + T L + LR G++++ E GMS E+ R F ++ Sbjct: 455 --GDRVVIFTERIETMNYLAEHLRTDLGLKSSAIQEISGGMSDAEQQRIVEDFGRTESST 512 Query: 558 QVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQ 602 ++L+ S++ SEG N + SH ++ FD+P++ + +QR GR+DR GQ Sbjct: 513 RILVASDVASEGLNLHYLSHRLIHFDIPWSLMVFQQRNGRIDRYGQ 558 >UniRef50_B9LWH1 Helicase domain protein n=3 Tax=Halobacteriaceae RepID=B9LWH1_HALLT Length = 988 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 87/248 (35%), Positives = 131/248 (52%), Gaps = 19/248 (7%) Query: 113 DRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR 172 DRL A QID LR RA + + L R + P+Q+ A+++ + R Sbjct: 59 DRLAARQIDSPIHHDLRERATRLDLAYRYDRFLSLTNNRIEIEPYQVQAAYEILNSYDHR 118 Query: 173 VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD 232 L+ DEVGLGKTIEAG+++ + + G AERVLI+ P L QW EM +F+ F ++D Sbjct: 119 YLIGDEVGLGKTIEAGIVIEELIARGRAERVLIVAPAPLTVQWQEEMREKFDRNFVIYDR 178 Query: 233 ERYAEAQ--HDAYNPFDTEQLVICSLDFARRS-----------KQRLEHLCEAEWDLLVV 279 E + H N ++ E L+I S+DFA+++ + L++L E+ WD+ V Sbjct: 179 ETVENHRQSHPNQNVWEQEDLIITSIDFAKQTNDDPESDRVSVRDALDNLNES-WDVAVF 237 Query: 280 DEAHHLV---WSEDAPSR--EYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN 334 DEAHHL S+D+ R Y E +AE+ +LL+T TP + + + + LLDP Sbjct: 238 DEAHHLTARRGSDDSIERTQRYTVGEAVAENSDALLLMTGTPHKGKSDQFYFLVSLLDPY 297 Query: 335 RFHDFAQF 342 RF +Q Sbjct: 298 RFSHESQI 305 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 68/272 (25%), Positives = 126/272 (46%), Gaps = 22/272 (8%) Query: 541 IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI 600 +++DR + + A ++L ++ EG N QFA MV +DLP+NP ++QR+GRL R Sbjct: 525 LDQDRRREEMEKFENEANLMLATDAAQEGLNLQFAHIMVNYDLPWNPIRIDQRMGRLHRY 584 Query: 601 GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPT-----GRTIYDSVYNDLINYLA 655 GQ ++I + + T +S ++ E + E GR + D +D I +A Sbjct: 585 GQERTVEIRNLFFKNTRESEILNLLVEKTNQIESDLGMRSDVLGRVLEDVDLDDTI--MA 642 Query: 656 SPDQTEGFDDLIKNCREQHEALKAQLEQGRDR-LLEIHSNGGEKAQALAESIE------- 707 + + D+++ + E E K LE + L+ + ++ + + + IE Sbjct: 643 AIAEDRPSDEVVADIDEAIEERKNALETVENEFLIRNRFDLSDEDEEILDVIERSQHGDV 702 Query: 708 EQDDDTNLIAFAMNLF--DIIGINQDD--RGDNMIVLTPSDHMLVPDFPGLSEDGITITF 763 +DD L+ + F DI G+ G ++ L D + G + TF Sbjct: 703 SEDDIEVLVREFFDEFGGDIRGVRPGPARAGGDVFQLDVPDVLCGNQVAGRYDQA---TF 759 Query: 764 DREVALAREDAQFITWEHPLIRNGLDLILSGD 795 R+VA+ +D +FI +HPL+++ ++ L + Sbjct: 760 TRQVAMEEDDVEFIALDHPLVQSLIEFCLDSN 791 >UniRef50_UPI0001AF4744 SNF2 family helicase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF4744 Length = 2150 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 135/484 (27%), Positives = 218/484 (45%), Gaps = 45/484 (9%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQ +A R R +LADEVGLGKTIEAG+ + + L G A+RVL++ P L+ Q Sbjct: 196 MPHQEAVARHALSRLRGRAVLADEVGLGKTIEAGLAVKELTLRGLAKRVLVLCPAPLREQ 255 Query: 215 WLVEMLRRFNLRFALFDDERYAEAQHDAYNP-FDTEQLVICSLDFARRSKQRLEHLCEAE 273 W EM +F+L+F D Y + P ++ +I SL R E L + Sbjct: 256 WREEMNHKFDLQF----DVAY-------HGPEVGNQEKLIVSLALGTRQA---EKLTKHP 301 Query: 274 WDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDP 333 WD+++VDEAH + RE I L LTATP Q + + + LL P Sbjct: 302 WDIVIVDEAHRAAGAGARKRREL--ITALTSACRYAFFLTATPVQNDLLELYRLIELLRP 359 Query: 334 NRFHDFAQFVEE-QKNYRP--VADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAAN 390 F F E + Y P +D A+ +L + M+ + ++ +++ Sbjct: 360 GTFTSVKTFQREFMRGYDPRTPSDPAAL----RRLISSA--MIRTTRAQAGVDRVVRRPV 413 Query: 391 SDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV 450 + + +EL ++ D L RN +R ++L T ++ Sbjct: 414 DVPIELGAPERELYALSTD-------LLRNVMRSPSDTMRRRSLALRL---TASPFSMGT 463 Query: 451 SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVIC 510 + + A + ++R R +L D ++ + ++ ++ H +VLV Sbjct: 464 TALRMADRHPDERVRVVLSE---IGHLAMDISSSARENKALQITHQWIREH--GRVLVFT 518 Query: 511 AKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGR 570 T L + + E EG+ A FH MS ER A F + A V++ ++ G+EG+ Sbjct: 519 QHTDTVTGLLRRM-EAEGLTARAFHGSMSASERAATIAAFRSGE--APVMISTDAGAEGQ 575 Query: 571 NFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD-IQIHVPYLEKTAQSVLVRWYHEGL 629 N QF + ++ +DLP+NP +EQRIGR+DR+ Q D + + Y +T + R E L Sbjct: 576 NLQFCNCVLNYDLPWNPMRIEQRIGRVDRLTQPRDEVFVANLYACRTIDESVYRLLAEKL 635 Query: 630 DAFE 633 FE Sbjct: 636 RMFE 639 >UniRef50_A1UB35 Helicase domain protein n=5 Tax=Actinomycetales RepID=A1UB35_MYCSK Length = 1201 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 142/515 (27%), Positives = 223/515 (43%), Gaps = 94/515 (18%) Query: 170 APR--VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRF 227 APR +LLAD+VGLGKTIEAGM++ + LL A V+I+ P L +W EM +F L F Sbjct: 292 APRANLLLADDVGLGKTIEAGMVIQELLLRHRARTVIIVCPAGLSVKWQNEMHDKFGLDF 351 Query: 228 ALFDDERYAEAQ--HDAY-NPFDTEQLVICSLDF---ARRSKQRLEHLCEAE-------- 273 + + E E + H + NPF +I S+ + R +Q + L Sbjct: 352 RIVNSETMKEVRRTHGVHANPFTLFPRIIVSMAWLPGPRAQRQLRDALITKSRGAGPRFA 411 Query: 274 WDLLVVDEAHHLVWSEDAPSR---------------EYQAIEQLAEHVPGVLLLTATPEQ 318 +D+LVVDEAHH+ + P+R +A+ LAE L L+ATP Sbjct: 412 FDVLVVDEAHHVAPA--TPTRTDKVGLRKGYAVDSQRTRAVRDLAERSEHRLFLSATPHN 469 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIG 378 ES A L ++DP RF +F++EQ +A +L D L Sbjct: 470 GYTESFTALLEMIDPQRFVR-GKFIDEQ---------ALQTVAVRRLKKD----LPGQFH 515 Query: 379 EQDIEPLLQAANSDSE-------------------DAQSARQELVSMLMDRHGTSRVLFR 419 E+ +E LL ++D E D + A+ +L R +S V F Sbjct: 516 ERKVEKLLITPSADEEAAYDRLIAFTQRRDTAAKGDDRGAKDMATLLLKKRFFSSPVAFA 575 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSG-------IMGARKSAEDRARDMLYPER 472 T + K +R L + +Y + + + + ++ L P Sbjct: 576 RTVDVYKDTRQRGL---VVDFDAEYDEVLGLDADELEEGRVEQPETQTLQQTKNALPPLT 632 Query: 473 IYQEFEGDNATWWNF------DPRVEWLMGYLTSHR-------SQKVLVICAKAATALQL 519 + + D + W D ++ L+ YL ++ +++V+V T + Sbjct: 633 AADKDDLDWLSDWGHSYEARPDSKLTALIDYLEANTKANGEWLNERVVVFTEYVDTLEWI 692 Query: 520 EQVLRER--EGIRAAVFHEGMSIIERDRAAAWFAEEDT--GAQVLLCSEIGSEGRNFQ-F 574 +LR+R E R AV +R+ A F + + ++LL ++ EG + Q + Sbjct: 693 HGILRQRGYEADRVAVIDGSTDGEQREVIRARFNTDPSREKLRILLATDAAGEGIDLQDY 752 Query: 575 ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 +V FD+PFNP+ LEQRIGR+DR GQ HD +I Sbjct: 753 CHRLVNFDIPFNPNRLEQRIGRIDRYGQTHDPEIR 787 >UniRef50_D2SCJ3 Helicase domain protein n=3 Tax=Actinomycetales RepID=D2SCJ3_9ACTO Length = 973 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 124/460 (26%), Positives = 207/460 (45%), Gaps = 43/460 (9%) Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 PR+LLAD VGLGKT+E GMIL + + G ER+L++ P + Q E+ RF L F Sbjct: 134 PRILLADAVGLGKTLEIGMILAELVRRGRGERILVVTPRHVLEQMQFELWTRFALPFVRL 193 Query: 231 DD---ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 D +R + NPF + VI S+D +S + L HL + WD +V+DE+H++ Sbjct: 194 DSLGIQRIRQQLPANRNPFTFYKRVIISID-TLKSDRYLAHLQKQRWDAVVIDESHNVT- 251 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL-RLLDPNRFHDFAQFVEEQ 346 ++ S+ + LA ++L +ATP G + FA L R+LDP+ +E++ Sbjct: 252 --NSTSQNNRLARLLASRTDALVLASATPHN-GKTASFAELVRMLDPSAVRPDGGLIEDE 308 Query: 347 KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSM 406 +++ ++ S D +++G E+ L A S +E A R+ + Sbjct: 309 VKR--------LVIRRHRHSPDVASVVGGDWAERKEPQNLLVAPSPAESA-IVRELEDTW 359 Query: 407 LMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIK---------VSGIMGAR 457 L G+S + G+ FP L L P + +++ G AR Sbjct: 360 LYPPDGSSP--YSGANGGL--FPW-TLAKAFLSSPAALRESVRERIRRLDPPRKGDQAAR 414 Query: 458 KSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS-----HRSQKVLVICAK 512 + R + + T + L+ YL + + +V + Sbjct: 415 PAPTSEQRREIEALENLDALAAEAGT--ETSGKCAALLTYLRKIGVGPKKPMRAVVFAER 472 Query: 513 AATALQLEQVLREREGI---RAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEG 569 AT L++ L G+ + AV H G+S +++ F + + +VL+ ++ SEG Sbjct: 473 VATLRWLQESLCADLGLSQDQVAVLHGGLSDVDQQEVVESFKQASSPIRVLVTGDVASEG 532 Query: 570 RNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 N H ++ FD+P++ +EQR GR+DR GQ H QI Sbjct: 533 VNLHAQCHELIHFDIPWSLIRIEQRNGRIDRYGQKHQPQI 572 >UniRef50_B8CWH2 Helicase domain protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWH2_HALOH Length = 467 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 121/510 (23%), Positives = 229/510 (44%), Gaps = 60/510 (11%) Query: 179 VGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEA 238 +GLGKTIEAGMIL + + G ++ LI+VP +L QW EM+ +F + D+ + Sbjct: 1 MGLGKTIEAGMILREYMDRGLVKKFLILVPASLGFQWTNEMVNKFKI------DDIFFNR 54 Query: 239 QHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA 298 + + FD + I SLD A+R K +L + ++D+++VDEAH L ++ + ++ Sbjct: 55 KGRGWMYFDHQ---IASLDKAKR-KNHARYLKQIDFDMVIVDEAHRL---KNRDTLNWKF 107 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAM 358 + L + LLLTATP Q ++ + + +L P+ + D+ F + Sbjct: 108 VNSLKKKY--CLLLTATPIQNNLKELYNLITILYPDLYKDYKDFKDR------------- 152 Query: 359 LLAGNKL--SNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRV 416 +AG L ++D+L + D++ ++ + D + + + ++ R Sbjct: 153 YVAGKHLVKNSDQLKV--------DLDKVMIRNSHDDTGLVFPERHIHQVTVELTPEERE 204 Query: 417 LFRNTRNGVKG-FPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ 475 L+ + VK + +R + I + YQ + S R A R + Y +Y Sbjct: 205 LYNKVTSYVKDEYNRRRVKKISILNLLTYQRELCSSSFALQRTLARSRDKSP-YLRELYG 263 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFH 535 A + +++ + L Q ++ +A + E+ G + +F+ Sbjct: 264 L-----ARNIRTNAKIKEVEKILKGIDGQAIIFTEYRATQEFIAHYL--EKRGYKTILFN 316 Query: 536 EGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIG 595 +S ++ F ++ VL+ +E GS+G N QF + ++ +DLP+NP +EQRIG Sbjct: 317 GALSSSGKEWIKYIFQQK---KDVLISTEAGSQGLNLQFCNVIINYDLPWNPMKIEQRIG 373 Query: 596 RLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIY------DSVYND 649 R+ R+GQ D+ I+ + T + ++ + ++ F+ I + D Sbjct: 374 RVHRLGQTKDVLIYNLATKDTIEEKILNLLYNKINLFKEIIGNMENIIINPRDGKKLEGD 433 Query: 650 LINYLAS----PDQTEGFDDLIKNCREQHE 675 +I ++ D GFD+L K + E Sbjct: 434 IIKVISQAKDDKDLERGFDELTKKFTTRKE 463 >UniRef50_A3NZZ0 SNF2-related:Helicase, C-terminal n=4 Tax=Burkholderiales RepID=A3NZZ0_BURP0 Length = 1045 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 137/504 (27%), Positives = 224/504 (44%), Gaps = 95/504 (18%) Query: 173 VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD 232 +L+AD+VGLGKT+EAG+++ + LL A VLI+ P +LQ +W VEML +F L F + D Sbjct: 143 LLIADDVGLGKTVEAGLVIQELLLRHRARTVLIVCPASLQEKWRVEMLEKFGLDFRVVDT 202 Query: 233 E---RYAEAQHDAYNPFDTEQLVICSLDFAR-----RSKQRL--EHLCEA-EWDLLVVDE 281 + R + NP+ + +I S+D+A+ R+ + + H+ ++DLLVVDE Sbjct: 203 DYIKRLRRERGIHTNPWTSHPRLITSMDWAKGGEGLRAMRDVLPPHVGHPRKFDLLVVDE 262 Query: 282 AHHLVWSEDA----PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFH 337 AH++ S A S+ + + + H L LTATP ES + L LLD RF Sbjct: 263 AHNVAPSAGAHYALESQRTRFVRAIGPHFQHRLFLTATPHNGYTESFTSLLELLDDQRF- 321 Query: 338 DFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS-EDA 396 A +L N+LS + L + + D PL + E Sbjct: 322 -----------------ARNILPDENRLSQVMIRRLKSDLVDADGNPLYARRTLQALEVP 364 Query: 397 QSARQELVSMLMDRHGTSRVL-FRNTRNGV-KGFPKRELHTIKLPLPTQYQTAIK--VSG 452 +A + V +D + SR N NG F R L L P + + ++ V+ Sbjct: 365 YTAEEREVHRKLDDYCASREKDAENAGNGFGTAFVNRLLKKRLLSSPAAFASTLEKHVTS 424 Query: 453 IMGAR-----------------KSAEDRARD-------------------MLYPERIYQE 476 + AR K+ ED A D L PE Q Sbjct: 425 LSEARPAKLDTMAERILHKAILKADEDYADDGDVENAQAEAVEEATRRSIPLTPE---QR 481 Query: 477 FEGDNATWW------NFDPRVEWLMGYLTSH-------RSQKVLVICAKAATALQLEQVL 523 D+ W D + + ++ +L+++ ++V++ T + Q+L Sbjct: 482 ATLDDLRAWAQRARNQADSKAQAILRWLSAYLKPDGQWNDRRVILFTEYRTTHQWMHQIL 541 Query: 524 RER--EGIRAAVFHEGMSIIERDRAAAWF--AEEDTGAQVLLCSEIGSEGRNFQ-FASHM 578 G R + H G+S ER+ A F + +D+ ++LL ++ SEG + Q + + Sbjct: 542 ASHGFGGERLGLLHGGLSQEEREPIKAAFQASPQDSPVRILLATDAASEGIDLQNHCNRL 601 Query: 579 VMFDLPFNPDLLEQRIGRLDRIGQ 602 + ++P+NP+++EQR GR+DR GQ Sbjct: 602 IHLEIPYNPNVMEQRNGRIDRHGQ 625 >UniRef50_D0LMZ8 Helicase domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LMZ8_HALO1 Length = 1094 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/193 (41%), Positives = 109/193 (56%), Gaps = 11/193 (5%) Query: 151 RTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPE- 209 R + P+QL V PR+L+AD VGLGKT+EAG IL + + A R+L++ P Sbjct: 102 RLEIAPYQLVPLMRVLHLSRPRLLIADGVGLGKTVEAGFILAELIARRRAHRILLVTPPG 161 Query: 210 TLQHQWLVEMLRRFNLRFALFDDERYAE---AQHDAYNPFDTEQLVICSLDFARRSKQRL 266 L H+W EM RF LRF + D E E Q NPFD E L + S+DFA++ + L Sbjct: 162 PLLHKWQSEMRERFGLRFKILDREAVTEIRFQQELGANPFDHESLGLISIDFAKQERV-L 220 Query: 267 EHLCEAEWDLLVVDEAHHLVWSEDAPSRE----YQAIEQLAEHVPGVLLLTATPEQLGME 322 + L +D++V+DEAHH A RE ++ E LA G+LLLTATP G + Sbjct: 221 QDLERTHYDVVVIDEAHHCASLGSAGDREDSLRHRLAEALARRSDGLLLLTATPHD-GHD 279 Query: 323 SHFARL-RLLDPN 334 +HFA L LLDP+ Sbjct: 280 AHFASLVELLDPS 292 >UniRef50_Q04VV1 DNA/RNA helicase Superfamily II n=6 Tax=Leptospira RepID=Q04VV1_LEPBJ Length = 951 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 4/199 (2%) Query: 145 SGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVL 204 S L RT L+PHQ+ + V PR +LADEVGLGKTIEA +++ + + ++VL Sbjct: 104 SALSNSRTRLLPHQIESTYIVVNSLRPRFILADEVGLGKTIEAALVMKELIFRRGYKKVL 163 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQ 264 I+ P L QW E+ +FN F + ++ + F Q +I S+DF + K Sbjct: 164 IVTPSPLLVQWQQELKNKFNEDFEIVKRRNFSTDGDKNWKNF---QHIITSVDFIKNPKY 220 Query: 265 RLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESH 324 E + + +WD+++ DEAH L +R Y E++++ +LLLTATP + +E Sbjct: 221 -AEEILKTKWDIVIFDEAHRLRRDYHKITRSYLFAEKISKKCECLLLLTATPFRGKLEEL 279 Query: 325 FARLRLLDPNRFHDFAQFV 343 + + L+DPN + FV Sbjct: 280 YYLMHLIDPNILGPYHTFV 298 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 75/315 (23%), Positives = 127/315 (40%), Gaps = 50/315 (15%) Query: 529 IRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPD 588 + +FH + ++ A F T ++L+C+E G EGRN QFA+ + +DLP++P Sbjct: 503 FQVTLFHGSLGADAKENAIVEFK---TKTEILICTEAGGEGRNLQFANVLFNYDLPWSPL 559 Query: 589 LLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYN 648 +EQRIGR+ R GQ ++ I + T ++ + FE + + + ++ + Sbjct: 560 KIEQRIGRIHRFGQKDNVFIFNFASKDTVAERILEVLTNKIRLFEESIGSSDELLGAIED 619 Query: 649 DLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEE 708 +L D F + + + E +E+ D ++I G EK AL Sbjct: 620 EL-------DFNSSFMKFVTGNKSRTE-----MEEEIDNRIKIAKKGFEKLGALVTP--- 664 Query: 709 QDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITI------- 761 LI F NL D ++R N L FP E G + Sbjct: 665 -----KLIDF--NLLDYYNHTLEERSFNNTHLEEFISRFTKIFP--EEAGFKLIRKKSQI 715 Query: 762 -------------TFDREVALAREDAQFITWEHPLIRNGLDLILSGDTG-SSTISLLKNK 807 TFD E+AL + +F+ + H LI + ++ G + + NK Sbjct: 716 YEIDSSQYKGKYGTFDSELALQNDSLEFLAFGHLLIDRTVSYLIQNQKGWGVSFHSVSNK 775 Query: 808 ALPVGTLLVELIYVV 822 V LVE +++ Sbjct: 776 EYYV--FLVEFQFIL 788 >UniRef50_Q10WY7 Helicase-like n=2 Tax=Cyanobacteria RepID=Q10WY7_TRIEI Length = 1065 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 106/186 (56%), Gaps = 10/186 (5%) Query: 156 PHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQW 215 PHQ+ I V ++ L+ADEVGLGKTIE G+IL LL+ A +RVL++ P ++Q QW Sbjct: 325 PHQIKILKQVAKKFPCNFLIADEVGLGKTIETGLILRYLLLTKAIQRVLVLAPASVQPQW 384 Query: 216 LVEMLRRFNLRFALFDDERYAEAQHDA-----YNPFDTEQLVICSLDFARRSKQRLEHLC 270 E+ +FNL F ++ + + + NP+++ +L++ S RR+++ E L Sbjct: 385 QEELREKFNLHFWSYNKGEFKDPYDNTSTINKTNPWNSHKLILASSHLVRRAERMTEILA 444 Query: 271 EAEWDLLVVDEAHHLVWS-----EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHF 325 +WDL+++DEAHH ++ P+ + ++QL E ++LL+ATP Q+ F Sbjct: 445 AEKWDLIILDEAHHARRQAPQNRKETPNSLLKLMQQLREKTKSLILLSATPMQIDPIEVF 504 Query: 326 ARLRLL 331 L LL Sbjct: 505 DLLELL 510 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 79/154 (51%), Gaps = 13/154 (8%) Query: 494 LMGYLTSHRSQ-----KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAA 548 L ++T+ R++ V++ T L + L++ G + A + + +D+ Sbjct: 761 LSHFITTLRTELIDRDSVIIFTQYTDTMDYLRRTLKDLYGSQIACYSGRGGEVYQDQKWC 820 Query: 549 WFAEEDT-------GAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 +E ++LLC+E SEG N Q ++ +D+P+NP +EQRIGRLDRIG Sbjct: 821 LVPKEKIKQKFRAGSIKILLCTESASEGLNLQTCGVIINYDMPWNPMRVEQRIGRLDRIG 880 Query: 602 QAH-DIQIHVPYLEKTAQSVLVRWYHEGLDAFEH 634 Q + ++I+ Y + T ++ + + + +D F++ Sbjct: 881 QFYPTVRIYNFYYDGTVEAKVYKKLRDRIDTFQN 914 >UniRef50_C9ZFV2 Putative helicase SNF2 family protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZFV2_STRSW Length = 1001 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 124/451 (27%), Positives = 198/451 (43%), Gaps = 41/451 (9%) Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 PR+L+AD VGLGKT+E G+ L + + G ER+L++ P+ + Q+ E+ RF + Sbjct: 147 PRLLIADVVGLGKTLEIGLTLAELIRRGRGERILVVTPQHVLEQFQHELWTRFAIPLVRL 206 Query: 231 DD---ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 D ER NPF + + VI S+D + + Q HL + WD +V+DE+H+L+ Sbjct: 207 DSVGIERIQREIPAGRNPFTSFKRVIVSIDTLKNTDQYRHHLEQIRWDAVVIDESHNLI- 265 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQK 347 + S Q LA ++L +ATP +S + LLDP D + Sbjct: 266 --NRGSLRNQLARTLAPRTDALILASATPHNGDAKSFAELIGLLDPVAIRD-------PE 316 Query: 348 NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSML 407 NYR AD + + K+S + + ++ + +E + +EL ++ Sbjct: 317 NYR-AADIEHLFIRRTKISPEVREQMKGQWADRGPSHSVHCPAGPAE--EKIFEELAAVW 373 Query: 408 MDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGA-------RKSA 460 + G + V V FP L + L + VS + R +A Sbjct: 374 LPADGGTSVC------SVPLFPYTLLKSF---LSSHAALRATVSARIRTLEKKNEPRGTA 424 Query: 461 EDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLE 520 + A E E D+A + ++ +G + Q+V+V + T L Sbjct: 425 AELAALYRLSELAADLTEADSAKFAALVRQLREEIG-VGPGSDQRVVVFSERVQTLEWLA 483 Query: 521 QVLREREGI--RAA-----VFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ 573 QVL G RAA V H G+S ++ F DT +VLL ++ SEG N Sbjct: 484 QVLPAALGFKGRAARDCVRVMHGGLSDEQQMACVEEFGLADTPVRVLLTGDVASEGVNLH 543 Query: 574 FASH-MVMFDLPFNPDLLEQRIGRLDRIGQA 603 H +V +D+P++ +EQR GR+DR GQA Sbjct: 544 RQCHQLVHYDVPWSLIRIEQRNGRIDRYGQA 574 >UniRef50_C1TPU8 DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPU8_9BACT Length = 955 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 81/220 (36%), Positives = 112/220 (50%), Gaps = 30/220 (13%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQ++ R LLADEVGLGKTIEAG+++ + L G R L++ P++L Q Sbjct: 99 LPHQIHALSRAISSDRVRYLLADEVGLGKTIEAGLVMRELKLRGLVRRTLVVAPKSLAMQ 158 Query: 215 WLVEMLRRFNLRFALFDDE---------RYAEAQHDA---YNPFDTEQLVICSLD----F 258 W+ EM FN F+L + +Y + D YNP+ I +LD Sbjct: 159 WVSEMSTHFNESFSLVNPSDLDALERPGQYVIGKTDHISDYNPWMRFSQAIVTLDSVKPI 218 Query: 259 ARR-----------SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVP 307 ARR ++ R E L + +WDL+VVDE+H + S D +R Y+ + LAE P Sbjct: 219 ARRRGWSKEKIRAYNRNRYERLVQGQWDLIVVDESHRMGGSTDQVAR-YKLGQGLAEAAP 277 Query: 308 GVLLLTATPEQLGMESHFARL-RLLDPNRFHDFAQFVEEQ 346 +LLL+ATP Q G F RL LLDP F D E+ Sbjct: 278 YLLLLSATPHQ-GKSDAFQRLMSLLDPMVFPDLESVTREK 316 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 4/103 (3%) Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSE 564 K+L+ T L+ L ER GI A+ + MS+ ER A F + A++L+ ++ Sbjct: 495 KLLIFTEFVPTQAMLQTFLEER-GIPCAILNGSMSMDERRMAQRDFRD---NARILISTD 550 Query: 565 IGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 G EG N QF +V +DLP+NP +EQRIGR+DRIGQ+ ++ Sbjct: 551 AGGEGLNLQFCHVVVNYDLPWNPMRIEQRIGRVDRIGQSKIVR 593 >UniRef50_A0LQ13 Helicase domain protein n=5 Tax=Bacteria RepID=A0LQ13_SYNFM Length = 1058 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 138/503 (27%), Positives = 226/503 (44%), Gaps = 86/503 (17%) Query: 173 VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD 232 +L+AD+VGLGKTIEAG+++ + L+ A V ++ P +LQ +W EM +F L F + D Sbjct: 146 LLIADDVGLGKTIEAGLVIQELLVRHRARTVFVVCPASLQVKWQTEMQEKFGLEFRIVDT 205 Query: 233 E---RYAEAQHDAYNPFDTEQLVICSLDFARRSKQ-RL------EHLCEA-EWDLLVVDE 281 E R + NP+ + ++ S+D+ + + RL H+ ++D+LVVDE Sbjct: 206 EYIKRLRRERGIHVNPWTSYPRLVTSMDWMKSGEGFRLLKDVLPPHITYPRKFDILVVDE 265 Query: 282 AHHLVWSEDA----PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFH 337 AH++ + + S+ + + LA H L L+ATP ES + L LLD RF Sbjct: 266 AHNVAPASASMYALESQRTRLVRSLAPHFTHRLFLSATPHNGYQESFTSLLELLDDQRFA 325 Query: 338 DFAQFVEEQKNYRPVADAVAMLLAGN--------KLSNDELNMLGEMIGEQDIEPLLQAA 389 E+Q + V + ++ N KL E++ E E+ I LL Sbjct: 326 RTVMPDEKQLHRVMVRRLKSDIVDANGTPVFPVRKLEGLEIDYAEE---ERQIHALLGKY 382 Query: 390 NSD-SEDAQSARQE----LVSMLMDRHGTSR------VLFRNTRNGVKGFPKRELHTI-- 436 +D S+ + R E V ML+ + S L ++ +G PK + T+ Sbjct: 383 TADRSKSVKGTRFEYGTDFVHMLLKKRLFSSPMAFALTLAKHRDTLERGKPKGDRDTMDD 442 Query: 437 ----KLPLPTQYQ------------TAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD 480 K L T+ + A++V G + S E RDML D Sbjct: 443 RILRKAILKTEEEYSDDSLVEEAQHEAVEVVGELAPPLSREQ--RDML-----------D 489 Query: 481 NATWWN------FDPRVEWLMGYLTSH-------RSQKVLVICAKAATALQLEQVLRER- 526 + W D + + ++ +L SH ++V++ AT L Q+L Sbjct: 490 RLSAWGEKARNRVDSKAKAILDWLESHLKTDGRWNGKRVILFTEYRATHSWLHQILTANG 549 Query: 527 -EGIRAAVFHEGMSIIERDRAAAWF-AEED-TGAQVLLCSEIGSEGRNFQ-FASHMVMFD 582 G R H M ER+ A F A D + ++LL ++ SEG + Q ++++ + Sbjct: 550 YGGDRLMYLHGSMLPDERESVKAAFQAHPDISPVRILLATDAASEGIDLQNHCNYLIHVE 609 Query: 583 LPFNPDLLEQRIGRLDRIGQAHD 605 +P+NP+++EQR GR+DR GQ D Sbjct: 610 IPWNPNVMEQRNGRIDRHGQKED 632 >UniRef50_A6L6P1 Putative ATP-dependent helicase n=1 Tax=Bacteroides vulgatus ATCC 8482 RepID=A6L6P1_BACV8 Length = 921 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 28/207 (13%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQ+ + V + R LLADEVG+GKTIEAG+I+ ++ L G +R+L++VP++ Q Sbjct: 84 LPHQILVLEKVMQGIQTRFLLADEVGMGKTIEAGLIIKEKKLRGELKRILLVVPKSAMLQ 143 Query: 215 WLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQ---------LVICSLD-----FAR 260 W E+ FN F ++D E + + F+ E+ +I S D AR Sbjct: 144 WQQELKEHFNESFYIYDSE-FISGMARTFASFEAEEELNFWKQHNQIIVSTDALKPLIAR 202 Query: 261 R----------SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVL 310 + +K RLE + A++D+L++DEAH + S SR YQ E L VP VL Sbjct: 203 QGWTQDKIDEYNKYRLEAVVNADFDMLILDEAHRMGGSTALVSR-YQMAETLCNSVPNVL 261 Query: 311 LLTATPEQLGMESHFAR-LRLLDPNRF 336 LL+ATP + G HF R L+L+D + F Sbjct: 262 LLSATPHR-GKSDHFRRVLQLIDSDAF 287 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 65/131 (49%), Gaps = 10/131 (7%) Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSE 564 K+LV T L + L E+ G + M + ER +A F AQV++ ++ Sbjct: 476 KILVFTEFRKTQAYLNEQL-EKAGFTTVGINGNMDLQERQKALIKFK---NNAQVMIATD 531 Query: 565 IGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW 624 E N QF + + +DLP+NP +EQRIGR+DRIGQ H + + Y T SV R Sbjct: 532 AAGESLNMQFCNIVFNYDLPWNPMAIEQRIGRVDRIGQKHPV---IAYNMLTNNSVDTRV 588 Query: 625 YH---EGLDAF 632 Y E LDA Sbjct: 589 YEIIVEKLDAI 599 >UniRef50_B0TB39 Snf2 family helicase, putative n=2 Tax=Clostridiales RepID=B0TB39_HELMI Length = 581 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 74/185 (40%), Positives = 108/185 (58%), Gaps = 13/185 (7%) Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 R LL DEVG+GKT+EAG+I + +L G A RVLI+ P +L QW EM +FNL F +D Sbjct: 75 RALLCDEVGMGKTVEAGLIALEYMLRGLARRVLILAPPSLVSQWREEMQVKFNLDFITYD 134 Query: 232 DERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA 291 D + +A H+ + F +I S+D A+R RL+ + A +DL++ DEAHHL ++ Sbjct: 135 DPAF-KAHHEPWTFFPR---IIASIDTAKRESHRLQ-IGAAAFDLVICDEAHHL---KNR 186 Query: 292 PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRP 351 ++ YQ + QL + +LLLTATP + +E F + LL P + A F +K Y Sbjct: 187 RTQAYQLVSQLQKKY--ILLLTATPVENDLEELFNLITLLLPGQLETAAAF---KKKYIT 241 Query: 352 VADAV 356 DA+ Sbjct: 242 RGDAL 246 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 100/189 (52%), Gaps = 18/189 (9%) Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSE 564 KV+V + T L + L E G A H GM +E++ +FA+ AQVLL +E Sbjct: 385 KVIVFTGFSETHRYLVRRLTE-AGFAVAQLHGGMKRLEKEEQVRYFADV---AQVLLSTE 440 Query: 565 IGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW 624 GSEGRN QF +V +DLP+NP +EQRIGR+ RIGQ D+ I+ +AQ L Sbjct: 441 TGSEGRNLQFCRCLVNYDLPWNPMQIEQRIGRIHRIGQERDVYIY----NLSAQDTLEAH 496 Query: 625 YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQ---HEALKAQL 681 E LDA ++ V +L L + + +GF+D++ N Q ++AQ+ Sbjct: 497 MLELLDA-------KINMFQLVVGELDMILGNLKENQGFEDMVLNAWLQSADEREMEAQM 549 Query: 682 EQGRDRLLE 690 ++ D+LLE Sbjct: 550 DKVGDQLLE 558 >UniRef50_A6DRD5 Putative ATP-dependent helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DRD5_9BACT Length = 956 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 113/468 (24%), Positives = 214/468 (45%), Gaps = 51/468 (10%) Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 PR+L+AD VGLGKTIE G+ L + + G +R++++ +++ Q+ E+ RF + Sbjct: 123 PRMLIADGVGLGKTIEVGIFLSEMMKRGKGKRIMVLALKSVLGQFQQEIWNRFAIPLVRL 182 Query: 231 DDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 D + A+ + + NPF+ I S+D + + + H+ +++WD++V+DE H + Sbjct: 183 DSQGIAQIKSELPANKNPFEYYDKTIVSIDTLKNNAKFRHHIEKSKWDIIVIDECHTV-- 240 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQK 347 ++ S+ + LA ++L +ATP ES + +++P ++ +E+ Sbjct: 241 -SNSSSQRGSLAQFLATRCESLILTSATPHNGKKESFANLINMIEPTAIPKNGEYSQEEV 299 Query: 348 NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQEL-VSM 406 + V +L SN E++I P+ + ED +Q++ +S Sbjct: 300 DPYYVRRFKQDILDEEVKSN---------FQEREIVPIHAELYQEEEDFLEVQQKIKISA 350 Query: 407 LMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRAR- 465 L T+ L+ G K F ++ + L Y ++ + ++ A+ AR Sbjct: 351 LESLEKTTEDLW-----GNKDFVGKKDFLFSIGLFKGYMSSPSAALSSLKKRVAKIEARQ 405 Query: 466 --------------DMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRS--QKVLVI 509 D++ E+I E ++ +D L+ S R ++++V Sbjct: 406 AENNLAENNTELLNDLI--EKI--EVIVNDKKDAKYDAFKNELIKLKWSGRKKDERIVVF 461 Query: 510 CAKAATALQLEQVLREREGI---RAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG 566 + T LE+ L+E + VFH G + E+ F ++D+ +VL+ S+ G Sbjct: 462 AERIDTIGYLEKRLQEDFNVADKAVQVFHGGQTDTEQQAIIDDFGKKDSDIRVLITSDAG 521 Query: 567 SEGRNFQF-ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYL 613 S+G N F + M +D+P++ LEQR GR+DR GQ+ PY+ Sbjct: 522 SQGVNLHFYCNRMFNYDIPWSLITLEQRNGRIDRYGQS-----KTPYI 564 >UniRef50_A8L3E6 Helicase domain protein n=2 Tax=Actinomycetales RepID=A8L3E6_FRASN Length = 1046 Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 122/454 (26%), Positives = 197/454 (43%), Gaps = 33/454 (7%) Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 PRVL+AD VGLGKT+E GM+L + G A+RVL++ P + Q E+ RF L Sbjct: 124 PRVLIADAVGLGKTLEIGMLLAELTRRGRADRVLVVTPRHVLEQMQHELWCRFGLPLVRL 183 Query: 231 DDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 D + + + + NPF + +I S+D + + R L WD++V+DE+H+L Sbjct: 184 DSDGLQRVRQNLPASRNPFTFYRRIIVSIDTLKSPRYR-SFLERHRWDVVVIDESHNLT- 241 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQK 347 + + + LA + ++L +ATP ES LRLLDP ++ Sbjct: 242 --NTGTLNNELARVLAPNTEALVLASATPHNGKKESFAELLRLLDPTAVGPDGEY----- 294 Query: 348 NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSML 407 VAD + + ++ S + +G + ++ A S +EDA + E+ Sbjct: 295 ---DVADVERLFIRRHRHSPEVAAEVGADWALRPEPVVIPVAASPAEDAIA--TEISRTW 349 Query: 408 MDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDM 467 + G S V R + K L + L T +++ G + D Sbjct: 350 LYPQGPSPVAGRGSALFPWTLAKASLSSPAALLETTEARLKRLASRSGGGAGERNGGGDH 409 Query: 468 LYPERIYQEFE--------GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICA-KAATALQ 518 R + G++A E+L RS V+ A + AT Sbjct: 410 ELERRALERLRDLTELALAGESA---KLTALAEYLRTIGVGARSATRAVLFAERVATLRW 466 Query: 519 LEQVLREREGI---RAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQF- 574 L L ER G+ + AV H G+ +E++R F + ++L+ ++ SEG N Sbjct: 467 LASELPERLGLAKDQIAVMHGGLPDVEQERIVDDFKTTASPVRLLITGDVASEGVNLHAQ 526 Query: 575 ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 H+V D+P++ +EQR GR+DR GQ H QI Sbjct: 527 CHHLVHVDIPWSLIRIEQRNGRIDRYGQKHPPQI 560 >UniRef50_O30320 ATP-dependent RNA helicase HepA, putative n=1 Tax=Archaeoglobus fulgidus RepID=O30320_ARCFU Length = 943 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 135/518 (26%), Positives = 227/518 (43%), Gaps = 89/518 (17%) Query: 143 PYSGLRGQRTSLIPHQL-------NIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQL 195 P S L + +L+P+QL +IA D GR RVL+A E GLGKTI AG+ + + + Sbjct: 23 PVSVLAASKINLLPYQLEDFLNLLDIA-DSGR--PVRVLIAYETGLGKTILAGLFIKEMV 79 Query: 196 LSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICS 255 + R+LI+ P +Q+QW E+ +F + L EA +P ++ +I S Sbjct: 80 IRNPNTRILIVTPPNVQYQWQDELKNKFGMHVPLL-----TEADKQGKDPL-KQKWLIAS 133 Query: 256 LDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTAT 315 +D + + L + + WD++VVDE H +R Q I+ L + +L LTAT Sbjct: 134 MD-TLKGENWLRRVEDHRWDIVVVDELHRAT----IKNRRAQLIQVLRDRTKHMLALTAT 188 Query: 316 PEQLGMESHFA-RLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLG 374 P G E F RL L++ N V+EQ N++ + D L++ G Sbjct: 189 PHD-GKEDQFVFRLSLINRN--------VDEQ-NWKEFVKKYTF----RRRKRDVLDLEG 234 Query: 375 EMIGEQDIEPL--------------------LQAANSDSEDAQSARQELVSMLMDRHGTS 414 I Q + PL +++ +E+ LV+ ++ R +S Sbjct: 235 RKIFPQKVYPLTIEIEPDEEEKEFYWEVEKYVRSYYKLAEEENKRSIGLVATIVGRAVSS 294 Query: 415 ------RVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTA------------IKVSGIMGA 456 +VL R +GF + EL + L Q +K+ + Sbjct: 295 SINAGVQVLKNRYRRLFEGFAE-ELEDAEDILDELKQAEEEGDDEKLEKLRMKIIESVPV 353 Query: 457 RKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAA 514 RK ++ +++L ER+ G+ D + E L+ + H + KV++ A Sbjct: 354 RKDLVEKEKEVL--ERLIT--LGEKLLERGRDKKTERLVQVVNEHMEKGNKVIIFTQFLA 409 Query: 515 TALQLEQVLREREGIRAAV-FHEGMSIIERDR--AAAWFAEEDTGAQVLLCSEIGSEGRN 571 T LE+ +E G + V H G++ E+ A W A++L+ ++ E N Sbjct: 410 TLDHLERTFKEIYGENSVVTVHGGLTHEEKKNRIAKLW-----DSAKILIATDAAGESLN 464 Query: 572 FQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 Q A+ ++ +++P+NP + QR+GR+ R GQ DI I Sbjct: 465 LQAANVVIHYEIPWNPVVYIQRVGRVYRYGQEKDIYIQ 502 >UniRef50_UPI0001C38076 helicase-like protein n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C38076 Length = 1044 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/196 (35%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLII 206 L+ L PHQL I V L+ADEVGLGKT+E G IL L+SG +RVL++ Sbjct: 288 LKSIPVQLWPHQLKILRRVAETFPRSFLIADEVGLGKTVETGAILRYLLVSGRVKRVLVL 347 Query: 207 VPETLQHQWLVEMLRRFNLRFALFDDERYAEAQ------HDAYNPFDTEQLVICSLDFAR 260 P ++Q QW E+ +FNL F + + + + +A NP++ L++ S R Sbjct: 348 APASVQSQWHEELREKFNLHFWSYGQKEFKDPYGAVSTVREAENPWNRHPLIVASSHLVR 407 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHL-----VWSEDAPSREYQAIEQLAEHVPGVLLLTAT 315 R ++ E L WDL+V+DEAHH +D P+ + + QL + +LLL+AT Sbjct: 408 RRERSQELLAAEPWDLVVLDEAHHARRRTPKAHQDTPNSLLELMGQLRDRTRSLLLLSAT 467 Query: 316 PEQLGMESHFARLRLL 331 P Q+ F L LL Sbjct: 468 PMQIDAIEVFDLLELL 483 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 17/230 (7%) Query: 558 QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH-DIQIHVPYLEKT 616 Q+LLC+E SEG N Q ++ +DLP+NP +EQRIGR+DRIGQ + ++IH Y + T Sbjct: 811 QLLLCTESASEGLNLQTCGVLINYDLPWNPMRVEQRIGRVDRIGQRYPTVKIHNLYYDGT 870 Query: 617 AQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEA 676 ++ + R E + F + + I V + + S D E +D++ E Sbjct: 871 VEAKVYRRLRERIGLFTNVVGNLQPILARVPTFIEQAVMSADPEE--EDVLMASFEDG-F 927 Query: 677 LKAQLEQGRDRLLEI--HSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRG 734 L L D +++I ++ + +L S + L + + + G + G Sbjct: 928 LTDSLNPSLDEMVKIDVEADLAQLRHSLPRSPLTWEALETLFSHS-QILRAAGFHFQKEG 986 Query: 735 DNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLI 784 D + L F G + D +TF +V A D ITW PL Sbjct: 987 DRLWTL----------FSGENGDRHRVTFSPQVFEADPDLPLITWGDPLF 1026 >UniRef50_D0LCG3 Helicase domain protein n=2 Tax=Actinomycetales RepID=D0LCG3_GORB4 Length = 937 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 119/470 (25%), Positives = 210/470 (44%), Gaps = 43/470 (9%) Query: 157 HQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWL 216 +QL A + PR+L+ D VGLGKT+E G++L + + G ER+L++ P + Q+ Sbjct: 111 YQLRPAAQALKNLRPRILIGDAVGLGKTLEIGILLSELIRRGRGERILVVTPRAVLEQFQ 170 Query: 217 VEMLRRFNLRFALFDD---ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAE 273 E+ RF + D ++ + + NPF + VI S+D + + HL Sbjct: 171 QELWTRFAIPLVRLDSAGIQKVKQTLPSSRNPFSYYKRVIVSIDTLKNPARYKHHLKSQH 230 Query: 274 WDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDP 333 WD +V+DE H+L+ + ++ + LA +L +ATP ES + +LDP Sbjct: 231 WDAVVIDECHNLI---NRGTQNNELARLLASQSDAFILASATPHNGKQESFAELINMLDP 287 Query: 334 NRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS 393 D +Y+ D + + ++ S D + E+ ++ + + + Sbjct: 288 TAIVD-------PNDYK-AKDIEHLYVRRHRNSADVKLDVSHKWRERRKPDIVGVSPTIA 339 Query: 394 EDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGI 453 E ++ +EL + + H T + G + FP L+ L P A++ S Sbjct: 340 E--RAVLRELEDVWL--HPTGDPVIEG--KGRQLFPW-TLYKAFLSSP----RALRASIA 388 Query: 454 MGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYL-----TSHRSQKVLV 508 R DR R+ + +R+ E AT ++E L+ YL + ++V++ Sbjct: 389 RRLRTIDNDRDRESVALQRLDDLAERAEAT---TPAKLEELVAYLGRIGVAASSDERVVI 445 Query: 509 ICAKAATALQLEQVLRER--------EGIRAA-VFHEGMSIIERDRAAAWFAEEDTGAQV 559 + T L+ LR R G+ A V H G+S + F ++ + ++ Sbjct: 446 FSERIDTLDWLQAELRRRLKFPTKAINGLLAVEVLHAGLSDEKIQAVVEGFGQKASPIRI 505 Query: 560 LLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 L+ S++ SEG N H +V +DLP++ ++QR GR+DR GQ H QI Sbjct: 506 LIASDMASEGLNLHKECHQLVHYDLPWSFIRIQQRNGRIDRYGQLHSPQI 555 >UniRef50_A3T2F3 Putative uncharacterized protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T2F3_9RHOB Length = 972 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 141/491 (28%), Positives = 215/491 (43%), Gaps = 71/491 (14%) Query: 140 FRMPY-SGLRGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLL 196 F+ P+ +G+ L+P L A D+ PRV L+AD+VGLGKTIEAG++L + LL Sbjct: 81 FQAPFRAGIEISPYQLVP--LAKALDL-----PRVNLLIADDVGLGKTIEAGLVLREMLL 133 Query: 197 SGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD---AYNPFDTEQLVI 253 A+ ++ P + QW E+ +F L + D E +AE + D YNP+ I Sbjct: 134 RKRADFFIVAAPAAMTLQWKEELSSKFGLNAQIVDAEFFAEMRADRGFGYNPWQATSAYI 193 Query: 254 CSLDFARRSKQRLEHLC----EAEWDLLVVDEAHHLVWSEDAPSREYQ-------AIEQL 302 S R + +L++DEAHH + A S+ Y A+ +L Sbjct: 194 ISHSLLRDEAYTVGLKAILGDPRPRSMLILDEAHH---AAPAHSQAYATDSQLTFAVREL 250 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 ++ L LTATP S A L +LDP RF ++Q DA+ + Sbjct: 251 SKKFEHRLFLTATPHNGHSNSFSALLEMLDPQRFTRGIPVTQDQH------DAIMV---- 300 Query: 363 NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELV--SMLMDRHGTSRVLFRN 420 +L +D L L + P+ + N + +D + EL LMD F + Sbjct: 301 RRLKSD-LRELSDTPF-----PIRRIKNIELDDTAAIAPELALFESLMD--------FGD 346 Query: 421 TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDR-ARDMLYPERIYQEFEG 479 + G+ L L + + + + +G E R A + L Q F+G Sbjct: 347 LADRKGGYSFVRLQQRLLSSVSAFHSTLTAE--IGKMPDGEVRDAGNALATAAKSQAFKG 404 Query: 480 DNATWWNFDPRVEWLMGYLTSHRS--QKVLVICAKAATALQ------LEQVLREREGIRA 531 D A N W+ + SH S Q+ +++ ++ L LE++ E R Sbjct: 405 D-AKSRNL---ATWIRENMGSHDSWNQRRVIVFSEYRDTLDWLRKQLLEELSLSPEDDRI 460 Query: 532 AVFHEGMSIIERDRAAAWF-AEEDTGA-QVLLCSEIGSEGRNFQFASH-MVMFDLPFNPD 588 A FH ER+R A F A+ D ++LLC++ EG N Q + + FDLP+NP Sbjct: 461 AEFHGSTQPNERERIKARFNADPDQEPLRILLCTDAAREGINLQHRCYDLFHFDLPWNPS 520 Query: 589 LLEQRIGRLDR 599 LEQR GR+DR Sbjct: 521 RLEQRNGRIDR 531 >UniRef50_B0K8X0 Helicase domain protein n=6 Tax=Clostridia RepID=B0K8X0_THEP3 Length = 894 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 108/209 (51%), Gaps = 18/209 (8%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQ+ + + R LLADEVGLGKTIEAG+I+ + G +R+LII P+ L Q Sbjct: 91 LPHQMYALNRALSKSTVRYLLADEVGLGKTIEAGLIIKELKARGLVKRILIISPKGLITQ 150 Query: 215 WLVEMLRRFNLRFALF--DDERYAEAQHDAYNPFDTEQLVICSLDFAR------------ 260 W E+ +FN F + D + + N +D VI SLD + Sbjct: 151 WHDELELKFNEDFKIILPQDFEVLKRIYGEGNIWDKFPQVITSLDSVKPVEKRQGWTKER 210 Query: 261 ---RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPE 317 +K+R+E+L A WD++VVDEAH L S +R IE L++ P +LLLTATP Sbjct: 211 IKEFNKERMENLVMAGWDIIVVDEAHRLAGSSSDVARHKLGIE-LSKASPYLLLLTATPH 269 Query: 318 QLGMESHFARLRLLDPNRFHDFAQFVEEQ 346 Q +S +RL+D F + V EQ Sbjct: 270 QGKTDSFLRLMRLIDKEAFPNEKAIVREQ 298 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 4/106 (3%) Query: 503 SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLC 562 SQK +V AT L+ L E +G + A+ + MS+ ERD A E VL+ Sbjct: 472 SQKFIVFTEFLATQQYLKDFL-ESKGYKVAILNGSMSMEERD---ASLKEFKNYKDVLIS 527 Query: 563 SEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 ++ G EG N QF + ++ +DLP+NP +EQRIGR+DRIGQ D+ + Sbjct: 528 TDAGGEGLNLQFCNIVINYDLPWNPMKIEQRIGRVDRIGQERDVLV 573 >UniRef50_P54509 Uncharacterized ATP-dependent helicase yqhH n=93 Tax=Bacillales RepID=YQHH_BACSU Length = 557 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 109/191 (57%), Gaps = 16/191 (8%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQL +A V + + +LADEVGLGKT+EAG+IL + ++ G A+++LI+VP +L Q Sbjct: 61 LPHQLEVAQKVVEKMNGKAILADEVGLGKTVEAGLILKEYMIRGLAKKILILVPASLVSQ 120 Query: 215 WLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEW 274 W+ E+ +F L A+ + Y Q D +V+ S+D A+RS R E + + Sbjct: 121 WVKELQEKF-LIPAVEQKKSYVWEQCD---------IVVSSIDTAKRSPHR-EIVLSIPY 169 Query: 275 DLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN 334 DL+++DEAH L +++ ++ Y+ + L + LLLTATP Q +E F + LL P Sbjct: 170 DLVIIDEAHKL---KNSKTKNYEFVRNLVKKY--CLLLTATPIQNRIEEIFNLVSLLKPG 224 Query: 335 RFHDFAQFVEE 345 F EE Sbjct: 225 HLGSQNHFQEE 235 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 6/130 (4%) Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGA-QVLLCS 563 KV++ AT + L+ L++ GI + F G ++D W + G QVL+ + Sbjct: 374 KVIIFTEYRATQIYLQWFLQQN-GISSVPFRGGFKRGKKD----WMKDLFRGKIQVLIAT 428 Query: 564 EIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVR 623 E G EG N QF +HM+ +DLP+NP LEQRIGR+ R+GQ D+ I+ + T + +++ Sbjct: 429 EAGGEGINLQFCNHMINYDLPWNPMRLEQRIGRIHRLGQERDVHIYNMATKHTVEEHILK 488 Query: 624 WYHEGLDAFE 633 +E + FE Sbjct: 489 LLYEKIHLFE 498 >UniRef50_B1LDN7 Helicase family protein n=20 Tax=Bacteria RepID=B1LDN7_ECOSM Length = 952 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 111/469 (23%), Positives = 211/469 (44%), Gaps = 36/469 (7%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +P QL+ + R+L+AD VGLGKT+EAG+++ + + G +R+L++ +++ Q Sbjct: 108 MPFQLDPTRMALAQPRQRILIADAVGLGKTLEAGILVSELIRRGRGKRILVLAVKSMLTQ 167 Query: 215 WLVEMLRRFNLRFALFDDERYAEAQH---DAYNPFDTEQLVICSLDFARRSKQRLEHLCE 271 + E RF + D + ++ +NPF I S+D ++ + HL Sbjct: 168 FQKEFWSRFAIPLTRLDSAGLQKVRNRIPTNHNPFHYFDKTIISIDTLKQDIEYRHHLEN 227 Query: 272 AEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLL 331 A WD++V+DEAH+ V S + + LA +++L+ATP ES + + +L Sbjct: 228 AWWDIIVIDEAHN-VAERGTSSLRSKLAKLLAGRSDTLIMLSATPHDGKAESFASLMNML 286 Query: 332 DPN-----RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSND--ELNMLGEMIGEQDIEP 384 DP + +++A F ++ R V ++G + +L L E+ Sbjct: 287 DPTAIANPKEYEYADFADKNLVVRRFKKDVKDQMSGEFPERNIVKLTRLASGAEEEAYRR 346 Query: 385 LLQAA--NSDSEDAQSARQELVSMLMDR--HGTSRVLFRNTRNGVKGFPKRELHTIKLPL 440 L+++ + D E AQS + L + +++ + N +K R+ H + + Sbjct: 347 LVESQFRDDDDEQAQSNKGRLFKITLEKALFSSPMACASVVANRLKRLESRKDHNSQSQI 406 Query: 441 PTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS 500 + ++ I A ++ L + I ++ W + + L+ + S Sbjct: 407 NELESLLLALNNI-----DASQFSKYQLLLDTIRKDLA------WKANNTEDRLVIFTES 455 Query: 501 HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVL 560 ++ + L +A L+ +Q+ R V E + F + + ++L Sbjct: 456 IKTLEFLEQQLRADLKLKDDQIATLRGDQGDTVLMETVEA---------FGKTQSPLRLL 506 Query: 561 LCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 +CS++ SEG N SH M+ FD+P++ + +QR GR+DR GQ H QI Sbjct: 507 VCSDVASEGINLHHLSHKMIHFDIPWSLMVFQQRNGRIDRYGQKHQPQI 555 >UniRef50_Q3M125 Type III restriction enzyme, res subunit n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3M125_ANAVT Length = 900 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 79/209 (37%), Positives = 114/209 (54%), Gaps = 12/209 (5%) Query: 151 RTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPET 210 R +L+PHQL + V + R L+AD+VGLGKTIEAG+IL L GA +R+LI+ P + Sbjct: 89 RIALLPHQLWVCRRVVQELPARCLVADDVGLGKTIEAGLILWTLLSKGAVKRILIVCPAS 148 Query: 211 LQHQWLVEMLRRFNLRFALFDDERY-AEAQHDAYNPFDTEQLVICSLDFARR-SKQRLEH 268 L QW + F++R RY EA + ++T VI SL R+ S R + Sbjct: 149 LVEQWQHRLRVMFDIRCT-----RYITEADTLKSDFWNTHHQVIASLPTLRKNSGDRHKR 203 Query: 269 LCEAE-WDLLVVDEAHHLVWSEDA-PSREYQAIEQLA---EHVPGVLLLTATPEQLGMES 323 L +AE WDLL+VDEAHHL E + P+ Y I++L + V V+ + TP + Sbjct: 204 LFDAEPWDLLIVDEAHHLNADEQSGPTLGYSFIDKLVNRYKKVRSVVFFSGTPHRGKNYE 263 Query: 324 HFARLRLLDPNRFHDFAQFVEEQKNYRPV 352 F+ L+LL + FH E+ ++ R V Sbjct: 264 FFSLLKLLREDLFHPKKLLKEQLQSLRSV 292 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%) Query: 542 ERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRI 600 +R+ AA F + + + L+ +E G EG + Q + ++ DLP+NP L QR+GRL+R Sbjct: 526 KRENAAEKFNKGEV--RFLISTEAGGEGIDLQENCYSLIHVDLPWNPMRLHQRVGRLNRY 583 Query: 601 GQAHDIQI 608 GQ +++ Sbjct: 584 GQKRAVEV 591 >UniRef50_D1C8V0 Helicase domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8V0_SPHTD Length = 1266 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/174 (37%), Positives = 96/174 (55%), Gaps = 10/174 (5%) Query: 156 PHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQW 215 PHQ ++ + R R L+ADEVGLGKTIEAG+ + Q LLSG R LI+ P ++ QW Sbjct: 297 PHQSRVSDAIVARFPERFLIADEVGLGKTIEAGLAIRQLLLSGRVRRCLILTPRSVMRQW 356 Query: 216 LVEMLRRFNLRFALFDDERYA-----EAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLC 270 E+ +F L +D R+ E + NPFD+E +++ S +R +++ + L Sbjct: 357 QEELYEKFLLDVPRYDGGRFVTVFGEEREPTTPNPFDSEPILLASSQLVKRRERQSQVLA 416 Query: 271 EAEWDLLVVDEAHH-----LVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 WDL+VVDEAHH + P+R + + L G+LLLTATP Q+ Sbjct: 417 ALPWDLVVVDEAHHARRKDFLSGRYRPNRLLELLRALRHRTQGMLLLTATPMQV 470 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 24/49 (48%), Positives = 36/49 (73%) Query: 558 QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 ++LLC+E SEG N Q ++ +D+P+NP +EQRIGR+DRIGQ + + Sbjct: 813 KILLCTEAASEGLNLQTCGVLINYDMPWNPMRVEQRIGRVDRIGQQYPV 861 >UniRef50_C7HF43 Helicase domain protein n=1 Tax=Clostridium thermocellum DSM 2360 RepID=C7HF43_CLOTM Length = 889 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 107/212 (50%), Gaps = 24/212 (11%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQL++ + + R +LADEVGLGKTIEAG+I+ + G R+LI+ P L Q Sbjct: 91 LPHQLHVLNRALSNNNVRYILADEVGLGKTIEAGLIIKELKARGLIRRILIVCPTGLVTQ 150 Query: 215 WLVEMLRRFNLRFAL-----FDDERYAEAQHDAYNPFDTEQLVICSLD------------ 257 W +EM +FN +F + +D R D Y FD VI +D Sbjct: 151 WDMEMKEKFNEKFHVILPENYDAIRQITGNEDVYGQFDQ---VISPMDSIKPLERRAGWT 207 Query: 258 ---FARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTA 314 A+ +++R+ + + WDL+ +DEAH + S +R Y+ + LA P +LLLTA Sbjct: 208 EEKIAKYNEERIYSIINSGWDLIAIDEAHRVAGSSGEVAR-YKLGKLLAAASPYLLLLTA 266 Query: 315 TPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ 346 TP E +R++D F + V+EQ Sbjct: 267 TPHNGKTEPFLRLIRMIDEKAFPNADAVVKEQ 298 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 75/132 (56%), Gaps = 4/132 (3%) Query: 488 DPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAA 547 +P E + R +K+++ AT L ++L++R G ++ + MSI ER+ Sbjct: 458 EPLFEIIDDLFAEDRQRKIIIFTEFVATQSYLVKLLKDR-GYSTSILNGSMSIEERN--- 513 Query: 548 AWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 A E T +L+ ++ G EG N QF++ ++ +DLP+NP +EQRIGR+DRIGQ D+ Sbjct: 514 AVLHEFKTQTDILISTDAGGEGLNLQFSNCIINYDLPWNPMKIEQRIGRVDRIGQQRDVV 573 Query: 608 IHVPYLEKTAQS 619 ++ L T ++ Sbjct: 574 VYNFILADTVEN 585 >UniRef50_UPI000185C06D superfamily II DNA/RNA helicase, SNF2 family n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C06D Length = 1004 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 119/457 (26%), Positives = 208/457 (45%), Gaps = 49/457 (10%) Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 PR+LLAD VGLGKT+E GMI+ + + G ER+L++ P+ + Q+ E+ RF + Sbjct: 141 PRILLADAVGLGKTLEIGMIVAELIRRGRGERILVVTPKHVLEQFQQEIWTRFAIPLVRL 200 Query: 231 DDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 D + + + NPF VI S+D + +K + + L + WD++V+DE H+ Sbjct: 201 DSHGIQKVRQKLPASKNPFSYFPRVIVSMDTLKSAKYKAQ-LEKVNWDIVVIDEIHN--- 256 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLD-----PNRFHDFAQ- 341 + ++ ++ LA ++L +ATP ES L+LLD P+ D Sbjct: 257 ATNSGTQNNDLARTLAPRTEALILASATPHNGNPESFKEILKLLDPLAVRPDGSIDMGLA 316 Query: 342 ---FVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDI--EPLLQAANSDSEDA 396 + +N V V A + + LN+ E E++ L S ++ Sbjct: 317 KKLIIRRHRNSPEVKSVVGAKWAPRE---EPLNIPVEASAEENAVANELRDTWISATDSV 373 Query: 397 QSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGA 456 ++R L + + + F ++ ++ K L TI+ TQ+ T Sbjct: 374 DTSRSHLFAWTLVKA------FLSSPAALEASIKNRLRTIE----TQHGTT------NNQ 417 Query: 457 RKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATA 516 + A R ++ Y ++ E A+ N+ + S RS+ +VI ++ + Sbjct: 418 EQLALQRLLELNY--KVTPEASNKYASLVNY-----LIETVGISKRSKNRVVIFSERVST 470 Query: 517 LQL--EQVLREREGIRAAV--FHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNF 572 L E ++R+ + AAV H MS IE+ F DT +VL+ ++ SEG N Sbjct: 471 LGWLQENLIRDLKLSPAAVKTMHGQMSDIEQMELIDEFKRTDTKLRVLITGDVASEGVNL 530 Query: 573 QFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 H +V +D+P++ ++QR GR+DR GQ ++ +I Sbjct: 531 HAQCHDLVHYDIPWSLIRIQQRNGRIDRYGQENNPRI 567 >UniRef50_B4SD80 Helicase domain protein n=7 Tax=Bacteria RepID=B4SD80_PELPB Length = 927 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/197 (36%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 145 SGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVL 204 S L R L+PHQ+ + H + R L+ADEVGLGKTIE +IL + G +R L Sbjct: 88 SALTSARIDLLPHQVVLTHRIATASPRRFLIADEVGLGKTIETALILRELASRGELDRAL 147 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQ 264 ++VP L + W E+ FNL F +F E + N F +I S+D +R Sbjct: 148 MVVPAGLVNNWHRELNEVFNLGFEVFGSE--GDITDRKTNAFAKHDRLIASVDTLKRPA- 204 Query: 265 RLEHLCEA-EWDLLVVDEAHHLVWSEDA----PSREYQAIEQLAEHVPGVLLLTATPEQL 319 R+ L +A WDL+V DEAHHL S + + Y+ E L +H +LLL+ATP Q Sbjct: 205 RIRRLLDAPRWDLVVFDEAHHLSASRNGGKVRKTENYKLAEALKDHSRDLLLLSATPHQG 264 Query: 320 GMESHFARLRLLDPNRF 336 + ++L++P F Sbjct: 265 NHFQFWMLVQLMNPTLF 281 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 27/252 (10%) Query: 550 FAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 F ++D G +VL+C+ G EG N QF+ + FDLP+NP +EQRIGR+ R GQ + Q++ Sbjct: 565 FRQKD-GPRVLVCTAAGREGINLQFSRILFNFDLPWNPMDVEQRIGRIHRYGQNYTAQVY 623 Query: 610 VPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT-IYDSVYNDL-INYLASPDQTEGFDDLI 667 L T + + E L T G+ +V DL L + +D L Sbjct: 624 NLVLSDTIEGRIFLMLDEKLTEIARTV--GKVDDQGNVAEDLRTQILGQLSERLNYDRLY 681 Query: 668 KNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQD----DDTNLIAFAMNLF 723 + E + Q+E L SN E Q + ++ D DD + + Sbjct: 682 QEALSDPELKRTQIE-----LEAAMSNSREARQVVFNLFQDLDGFSLDDYKPFSDVSSSL 736 Query: 724 D----IIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDG---ITITFDREVALAREDAQF 776 D + +R ++ + + L+ +EDG + T +R A A+++ + Sbjct: 737 DRIVRFLSAALLERQQKLVRIDEQTYDLI------AEDGNRQVRFTLNRNAATAQDELEL 790 Query: 777 ITWEHPLIRNGL 788 + +HP+I++ L Sbjct: 791 LGLDHPIIQSEL 802 >UniRef50_B8G776 Helicase domain protein n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G776_CHLAD Length = 966 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 80/230 (34%), Positives = 104/230 (45%), Gaps = 39/230 (16%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQL R LLADEVGLGKTIEAG+I+ + L G R LII P+ L Q Sbjct: 91 LPHQLRALSRAISTDRVRYLLADEVGLGKTIEAGLIMKELKLRGLVRRTLIIAPKGLVTQ 150 Query: 215 WLVEMLRRFNLRFALFDDERYAEAQHDA-------------------------------Y 243 W+ EM FN +F E Y + A Sbjct: 151 WVAEMAMHFNEQFHAILSEDYKSLKRIAAIAKTEARGMRTTSLEPSSLISPPSSIFTANA 210 Query: 244 NPFDTEQLVICSLDFARRSK-------QRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREY 296 NPF V+ S+D + +R E L A WDL++VDEAH L S D +R Y Sbjct: 211 NPFTAFDQVVVSMDSVKPPSNADSAAWERFEDLISAGWDLVIVDEAHRLGGSTDQVAR-Y 269 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ 346 + + LAE P +LLL+ATP Q E+ + + LLD F D +E+ Sbjct: 270 RLGQGLAEAAPYLLLLSATPHQGKTEAFYRLIALLDSQAFPDVNSVTKER 319 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 4/103 (3%) Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSE 564 KVLV T L + L +R G + M + R + FA A++L+ ++ Sbjct: 503 KVLVFTEFVPTQEMLYEFLTQR-GFTVVCLNGAMDMAARKQVQDAFA---NNARILISTD 558 Query: 565 IGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 G EG N QF ++ +D+P+NP LEQRIGR+DRIGQ H ++ Sbjct: 559 AGGEGLNLQFCHVVINYDIPWNPMRLEQRIGRVDRIGQTHTVR 601 >UniRef50_A6FSF7 Helicase/SNF2 family domain protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FSF7_9RHOB Length = 871 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 104/215 (48%), Gaps = 6/215 (2%) Query: 124 DRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGK 183 D A RA+ + + + R L+PHQL + V R R L+AD+VGLGK Sbjct: 61 DPLATLARAQALAVQSINDQWGVFSRSRVQLLPHQLWVCRQVTRTWPTRWLVADDVGLGK 120 Query: 184 TIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAY 243 TIE+G+IL L SG RVL++ P L QW + F++R E A+ Sbjct: 121 TIESGLILEPLLTSGRVRRVLVLTPARLAPQWRARLKTMFDIRL----QEYSADLDRGRV 176 Query: 244 NPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL- 302 + ++T Q V+ S R K R L WDL++VDEAHH E + Y +E+L Sbjct: 177 SFWETAQQVVASFHTLRMKKARDRLLTAEPWDLVIVDEAHHFQAQERTNTLTYSLLEELE 236 Query: 303 -AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 A + ++L T TP + A ++L+ P+ F Sbjct: 237 NAGKIGSLVLFTGTPHRGKDYGFLALMQLVRPDLF 271 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIG 601 RD+AA F T + L+ +E G EG + Q + +V DLP+NP L QR+GRL+R G Sbjct: 507 RDKAAEDFNGGRT--RFLISTEAGGEGIDLQDRCATLVHVDLPWNPMRLHQRVGRLNRYG 564 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWY 625 Q +Q+ YL + ++V R + Sbjct: 565 QKRAVQV---YLMRNPETVEARIW 585 >UniRef50_Q5P8U4 Helicase/SNF2 family domain protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P8U4_AZOSE Length = 883 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 9/213 (4%) Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAG 188 R RA+ + + R SL+PHQL + H R+ R+L+AD+VG+GKT+EAG Sbjct: 66 RLRAQAAAIRSVNDAWGVFSRSRISLLPHQLWVCHKALRQWPVRLLIADDVGMGKTVEAG 125 Query: 189 MILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDT 248 +IL L GA +R+L++ P L QW + + + F++R A++ A+A + ++T Sbjct: 126 LILWPLLAKGAIKRLLVLTPAKLVEQWQLRLRQMFDIRLAIYT----ADADTPRTDFWNT 181 Query: 249 EQLVICSLDFARRSKQ-RLEHLCEA-EWDLLVVDEAHHLVWSED-APSREYQAIEQLAE- 304 + V+ SL + R + L A EWD+++VDEAHHL E+ A + Q +E + E Sbjct: 182 QDRVVASLPTLKADNNGRHDRLLSAPEWDMVIVDEAHHLNADENGAKTLGLQLLESMQEL 241 Query: 305 -HVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 + +L T TP + ++ + LLD N F Sbjct: 242 GKITSCILFTGTPHRGKDYGFWSLMSLLDRNLF 274 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Query: 558 QVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 + L+ +E G EG + Q S ++ DLP+NP L QR+GRL+R GQ +++ Sbjct: 528 RFLISTEAGGEGIDLQEHCSALIHVDLPWNPMRLHQRVGRLNRYGQTQSVEV 579 >UniRef50_D2QAP2 ATP-dependent DNA helicase recQ n=3 Tax=Bacteria RepID=D2QAP2_9BIFI Length = 1185 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 108/221 (48%), Gaps = 11/221 (4%) Query: 124 DRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP-RVLLADEVGLG 182 D F L A + P S + +PHQ+ ++ P R LLAD+ G G Sbjct: 83 DEFRLAAEALRIKYAALYDPMSAVYSSDIDPLPHQIRAVYEDMLPKVPLRFLLADDPGAG 142 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTI AG+ + + LL AAER+LI+ P L QW E+ +FNL F +F +Q + Sbjct: 143 KTIMAGLYIKEMLLRSAAERMLIVCPGGLAEQWRDELADKFNLDFEVFQPSMRELSQ--S 200 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHL------VWSEDAPSREY 296 NPF +I +D R+ + + L E WD+ VVDEAH + V+ E ++ + Sbjct: 201 GNPFREHARLIVRMDQVARNDEYRKMLSEVSWDIAVVDEAHRMSAHYKNVFGETDYTKRF 260 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFAR-LRLLDPNRF 336 E LA LL+TATP G E F + LLDP+RF Sbjct: 261 HFGEILARTSENYLLMTATPHS-GKEDDFQLFMTLLDPDRF 300 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 3/113 (2%) Query: 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAV--FHEGMSIIERDRAAAW 549 E ++ TS K++V T L+ + G AV H GM ER R Sbjct: 515 EKVLNTGTSELPHKMIVFTEHKDTLTYLQGRIDTLLGRPEAVETIHGGMDRAERKRVQER 574 Query: 550 FAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 F + ++L+ ++ EG N Q A MV +DLP+NP+ +EQR GR+ RIGQ Sbjct: 575 FVN-NPATRILVATDAAGEGLNLQRADLMVNYDLPWNPNRIEQRFGRIHRIGQ 626 >UniRef50_C7RVR4 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVR4_9PROT Length = 1097 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 101/181 (55%), Gaps = 17/181 (9%) Query: 156 PHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQW 215 PHQ+ + PR+L+ADEVGLGKTIEAG++L LSG A+R+LI+ P+ + QW Sbjct: 300 PHQILTFQRMLDHWPPRLLIADEVGLGKTIEAGLVLRYAWLSGRAQRILIMAPKAVMTQW 359 Query: 216 LVEMLRRFNLRFALFDDERYA----------EAQHDAYNPFDTEQLVICSLDFARRSKQR 265 E+ +FNL + ++D +R + + A + + E VI S RR ++ Sbjct: 360 QAELREKFNLNWPIYDGKRLSWYPSPLLRGKSEKEVARDEWHREPFVIVSSHLMRRRDRQ 419 Query: 266 LEHLCEAE-WDLLVVDEAHHL------VWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 E L A+ WDL+V+DE+HH E P+ + +++L E G+LLLTATP Q Sbjct: 420 NELLEVADPWDLIVLDESHHARRKSPGAAQEGPPNLLLKLMQRLKERTDGLLLLTATPMQ 479 Query: 319 L 319 + Sbjct: 480 V 480 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 27/46 (58%), Positives = 36/46 (78%) Query: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 AQVL+C++ +EG NFQF +V FD P+NP +EQRIGR+DR+GQ Sbjct: 838 AQVLVCTDAAAEGLNFQFCGALVNFDSPWNPMRIEQRIGRVDRLGQ 883 >UniRef50_C0GU74 Helicase domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GU74_9DELT Length = 955 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 111/463 (23%), Positives = 199/463 (42%), Gaps = 35/463 (7%) Query: 154 LIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 +P+QL+ A + R+L+AD VGLGKT+EAG++L + + G +R+L++ +++ Sbjct: 113 FVPYQLDPALQALEKPRQRILIADSVGLGKTLEAGVLLSELIRRGRGKRILVVTMKSMLT 172 Query: 214 QWLVEMLRRFNLRFALFDD---ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLC 270 Q+ E+ RF + D +R +NPF I S+D ++ + HL Sbjct: 173 QFQKELWTRFTIPLTRLDSIGLQRVRSRIPTNHNPFYYFDKSIISMDTLKQDNEFRVHLE 232 Query: 271 EAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRL 330 +A WD++V+DEAH++ ++ + L+ +++L+ATP S + + + Sbjct: 233 KATWDVIVIDEAHNVAERGHGRTQRARLARLLSRQSDSLIMLSATPHDGRARSFASLMNM 292 Query: 331 LDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAAN 390 LDP + Q +Y P D + L + D + + E+ I A Sbjct: 293 LDPT-------AIANQDDYGP--DDIKGLFI-RRFKKDIQHQVKGSFQERRISTCHIPAT 342 Query: 391 SDSEDAQSARQELVSMLMDRHGTSRVLFRNT-RNGVKGFPKRELHTIKLPLPTQYQTAIK 449 E A + L ++ T LF+ T + P L TI L Q Q + Sbjct: 343 EQEERAFAGLAGLNLHSLNNKRTGGQLFQTTLEKALFSSPAACLETIDARL-RQLQREPQ 401 Query: 450 VSGIMGARKSAEDRARDMLYPERIYQEFE---------GDNATWWNFDPRVEWLMGYLTS 500 + + E R+ + F+ W DP ++ L+ + Sbjct: 402 ADYVGDVQSLKELRSAVAEITSESFSRFQKLVDLLSSPSSELHWTGKDP-LDRLVIFTER 460 Query: 501 HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVL 560 + + L A L+ V R G+ S IE+ R F +++ ++L Sbjct: 461 IATLEFLYRHLPPALGLKDRHVERLHGGL---------SDIEQQRVVEDFGRDESPLRLL 511 Query: 561 LCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQ 602 + S++ SEG N + H ++ FD+P++ + +QR GR+DR GQ Sbjct: 512 IASDVASEGINLHYLCHRLIHFDIPWSLMVFQQRNGRIDRYGQ 554 >UniRef50_A6T1M7 ATP-dependent RNA helicase n=7 Tax=Bacteria RepID=A6T1M7_JANMA Length = 1173 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 14/216 (6%) Query: 134 KYSSEQFRM-------PYSGLRGQRTSLIPHQLNIAHDVGRRHAP-RVLLADEVGLGKTI 185 K ++E +R+ P + +PHQ+ ++ P R +LAD+ G GKTI Sbjct: 78 KLAAEAYRINLAHLFDPMMAVHTSNVEPLPHQITAVYESMLPRQPLRYVLADDPGAGKTI 137 Query: 186 EAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNP 245 AG+ + + L+ A+R+LI+ P +L QW EM +F L F LF E+ +++ NP Sbjct: 138 MAGLFIRELLMRADAKRILIVAPGSLVEQWQDEMFEKFGLSFTLFSREQVEQSR--GGNP 195 Query: 246 FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS----EDAPSREYQAIEQ 301 FD L++ +D R++ E L + WDL+VVDEAH L S + ++ +Q E Sbjct: 196 FDDIDLMVARVDQLSRNEDLQEKLRLSHWDLIVVDEAHKLSASYFGNKVNKTKRFQLGEL 255 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFH 337 L LL+TATP E + LLD +RF+ Sbjct: 256 LGSITRHFLLMTATPHNGKEEDFQLFMSLLDSDRFY 291 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 3/105 (2%) Query: 500 SHRSQKVLVICAKAATALQLEQVLREREGIRAAV--FHEGMSIIERDRAAAWFAEEDTGA 557 S R +K+++ T L +R G AV H G+ ER + F D Sbjct: 501 SGRQRKLIIFTEHRDTLNYLAVKIRGLIGNEDAVTMIHGGIKREERRKVQELF-RNDPAT 559 Query: 558 QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 +VLL ++ EG N Q A+ MV +DLP+NP+ LEQR GR+ RIGQ Sbjct: 560 RVLLATDAAGEGVNLQNANLMVNYDLPWNPNRLEQRFGRIHRIGQ 604 >UniRef50_A4J1V5 Helicase domain protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1V5_DESRM Length = 942 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 116/211 (54%), Gaps = 16/211 (7%) Query: 151 RTSLIPHQLNIAHDVGRRHAPR-VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPE 209 R L PHQ++ A R + V++ADEVGLGKTIEAG++L Q+ + ++L+I+P Sbjct: 34 RVDLNPHQVDAALFALRSPLSKGVIMADEVGLGKTIEAGLVLSQR-WAERKRKILLILPA 92 Query: 210 TLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAY-NPFDTEQ-LVICSLDFARRSKQRLE 267 TL+ QW +E+ +F L + + Y + + PF+ + ++ICS FA R E Sbjct: 93 TLRKQWQMELEEKFFLPTLILESASYNCLRKEGITKPFERQDAIIICSFHFA---AARAE 149 Query: 268 HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 L + WDL+++DEAH L ++ Q+I+ H P LLLTATP Q + + Sbjct: 150 ELRQVSWDLVIIDEAHRLRNVYKTSNKMAQSIKTAVSHAPK-LLLTATPLQNSLLELYGL 208 Query: 328 LRLLDPNRFHDFA----QFV----EEQKNYR 350 + ++D + F D QF+ EEQ+N++ Sbjct: 209 VSVIDDHVFGDVKTYRDQFIHESDEEQRNHK 239 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 5/85 (5%) Query: 535 HEGMSIIE----RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLL 590 H+G II D AA E +L+ +E +EG N QF S +V +DLP+NP + Sbjct: 467 HQGQDIITGSPTADMRAALIEEFRERGTILIATESAAEGVNLQFCSLVVNYDLPWNPQRI 526 Query: 591 EQRIGRLDRIGQAHDIQIHVPYLEK 615 EQRIGR R GQ +D+ + V +L K Sbjct: 527 EQRIGRCHRYGQKYDVVV-VNFLNK 550 >UniRef50_A4VQ25 Superfamily II DNA/RNA helicase, SNF2 family n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VQ25_PSEU5 Length = 957 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 106/194 (54%), Gaps = 4/194 (2%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +P QL AH V ++ PR+L+AD VGLGKT+EAG++ + + G A R+L++ +++ Q Sbjct: 108 LPFQLQPAHQVLQQLRPRLLIADTVGLGKTLEAGILTAELMRRGKARRILVVTTKSMMRQ 167 Query: 215 WLVEMLRRFNLRFALFDDERYAEAQHDA---YNPFDTEQLVICSLDFARRSKQRLEHLCE 271 + E RF + D + D +NPF+ I S+D +R + +L + Sbjct: 168 FQQEFWNRFTIPLTRLDSAGIQRIRRDIPANHNPFNYYDRTIISVDTLKRDSEYRHYLEK 227 Query: 272 AEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLL 331 A WDL+++DEAH++ + + ++ + E L++ ++LLTATP +S + +R+L Sbjct: 228 AWWDLIIIDEAHNVSYKGNR-TQSNRLAELLSQRSDALILLTATPHNGKKDSFASLMRML 286 Query: 332 DPNRFHDFAQFVEE 345 DP A + + Sbjct: 287 DPTVLPSGADYTRD 300 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 4/110 (3%) Query: 503 SQKVLVICAKAATALQLEQVLREREGIR---AAVFHEGMSIIERDRAAAWFAEEDTGAQV 559 S ++++ + T L+Q L + G++ A+ H + E + F + + ++ Sbjct: 442 SDRLVIFTERVETLKFLQQELPKALGLKDDAVAILHGQLPDQEIQQTVEDFGKTHSPLRL 501 Query: 560 LLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 L+ S++ SEG N + +H ++ FD+ ++ + +QR GR+DR GQ +I Sbjct: 502 LIASDVASEGLNLHYQAHRLIHFDISWSLMVFQQRNGRVDRYGQTRAPKI 551 >UniRef50_B1XR31 DEAD/H helicase n=2 Tax=Cyanobacteria RepID=B1XR31_SYNP2 Length = 1111 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 65/174 (37%), Positives = 100/174 (57%), Gaps = 11/174 (6%) Query: 156 PHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQW 215 PHQ+ I V L+ADEVGLGKTIE G+IL +SG A+R+L++ P ++Q QW Sbjct: 357 PHQIKILRHVVENFPCSFLIADEVGLGKTIETGLILRYLFVSGKAKRILVLAPASVQPQW 416 Query: 216 LVEMLRRFNLRFALFDDERYAEAQHDAY----NPFDTEQLVICSLDFARRSKQRLEHLCE 271 EM +FNL F + + + NP++T+ L++ S RR + R+E L Sbjct: 417 HSEMREKFNLHFWSYSKGQLTNPDGETCPSLDNPWNTQDLILASSHLVRR-RDRMEELLA 475 Query: 272 AE-WDLLVVDEAHHLVWS-----EDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 AE WD++++DEAHH ++ P+R + ++QL E ++LL+ATP Q+ Sbjct: 476 AEPWDVVIIDEAHHARRKAPQNRKETPNRLLELLQQLREKTLSMVLLSATPMQI 529 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%) Query: 558 QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD-IQIHVPYLEKT 616 ++LLC+E SEG N Q ++ +D+P+NP +EQRIGR+DRIGQ + IH Y + T Sbjct: 872 KILLCTESASEGLNLQTCGVLINYDMPWNPMRVEQRIGRIDRIGQTFPRVIIHNFYYDGT 931 Query: 617 AQSVLVRWYHEGLDAF 632 ++ + + + + AF Sbjct: 932 VEARVYQRLRDRIHAF 947 >UniRef50_Q3JN30 Helicase (Snf2 family) n=20 Tax=Bacteria RepID=Q3JN30_BURP1 Length = 960 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 108/201 (53%), Gaps = 7/201 (3%) Query: 145 SGLRGQRTSLIPHQLNIAHDVGRRHAPR-VLLADEVGLGKTIEAGMILHQQLLSGAAERV 203 S L + L PHQ+ A R R V+LADEVGLGKTIEAG+++ Q+ + R+ Sbjct: 32 SALVDSQVDLNPHQVEAALFACRNPLSRGVILADEVGLGKTIEAGLVISQR-WAERRRRI 90 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERY-AEAQHDAYNPFDTE-QLVICSLDFARR 261 LIIVP L+ QW E+ +F+L+ + + + Y A + + NPF T + VICS FA Sbjct: 91 LIIVPANLRKQWHQELQDKFSLQGLILESKNYNALRKSERQNPFLTSFEPVICSYQFA-- 148 Query: 262 SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGM 321 K + + + E EWDL+V DEAH L + + ++ HV +LLTATP Q + Sbjct: 149 -KSKAKDIKEIEWDLVVFDEAHRLRNVYKTSNVIAKTLKDALVHVHSKVLLTATPLQNSL 207 Query: 322 ESHFARLRLLDPNRFHDFAQF 342 + + ++D F D F Sbjct: 208 LELYGLVSMIDERVFGDIDSF 228 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 9/128 (7%) Query: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ-AHDIQIHVPYLEK 615 ++++ +E G+EG N QF S ++ +DLP+NP +EQRIGR R GQ + ++ L Sbjct: 505 GKIMIATEAGAEGINLQFCSLVINYDLPWNPQRIEQRIGRCHRYGQKFDVVVVNFVDLSN 564 Query: 616 TAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHE 675 A + + FE + ++ + + D D+ +NCRE E Sbjct: 565 EADRRVYDLLSQKFQLFEGVFGASDEVLGAIGSGV-------DFERRIADIYRNCRESDE 617 Query: 676 ALKAQLEQ 683 +KA EQ Sbjct: 618 -IKASFEQ 624 >UniRef50_B1I2C6 Helicase domain protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2C6_DESAP Length = 1147 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 17/204 (8%) Query: 143 PYSGLRGQRTSLIPHQLNIAHDVGRRHA-PRVLLADEVGLGKTIEAGMILHQQLLSGAAE 201 PY GL R +PHQL +D + A R LLAD+ G GKTI AG+++ + L G AE Sbjct: 93 PYFGLSISRVDPLPHQLEAVYDYLLKLARVRFLLADDAGAGKTIMAGLLIRELQLRGLAE 152 Query: 202 RVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARR 261 R+L++ P L QW E+ +F+ +F + + N + ++ VI SLD A+R Sbjct: 153 RILVVCPANLSFQWQRELKEKFDEKFLVLKGGDIRD--QFGVNQWLEQKKVITSLDLAKR 210 Query: 262 SKQRLEHLCEAEWDLLVVDEAHHLVWSEDA-PSREYQAIEQLAEHVPGVLLLTATPEQLG 320 ++ L L + WDL++VDEAH + W+ A + Y E L + +L+LTATP + Sbjct: 211 -EEILPGLRQVRWDLVIVDEAHRMSWTPPARKTARYALGELLRDTSDHILMLTATPHK-- 267 Query: 321 MESHFARLRLLDPNRFHDFAQFVE 344 DPN F F Q ++ Sbjct: 268 ----------GDPNNFSLFLQLLD 281 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 4/85 (4%) Query: 528 GIRAAVFHEGMSIIERDRAAA-WFAEE---DTGAQVLLCSEIGSEGRNFQFASHMVMFDL 583 G++ H GM RD +AE+ + QVL+ +E EG N Q + + +D+ Sbjct: 522 GLKVGYIHGGMKPGSRDEPGTRLYAEQQFREGEIQVLVATEAAGEGINLQVCNILFNYDI 581 Query: 584 PFNPDLLEQRIGRLDRIGQAHDIQI 608 P+NP+ LEQR+GR+ R GQ D I Sbjct: 582 PWNPNRLEQRMGRIHRYGQRKDCLI 606 >UniRef50_A7NJN1 Helicase domain protein n=3 Tax=cellular organisms RepID=A7NJN1_ROSCS Length = 1129 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 111/215 (51%), Gaps = 18/215 (8%) Query: 132 ARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGM 189 AR+Y P + + +PHQ+ + H PRV L+AD+ G GKTI AG+ Sbjct: 80 ARRYRYASLYDPLLAMNISKVDPLPHQIEAVYGYVL-HQPRVRFLIADDPGAGKTIMAGL 138 Query: 190 ILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDE----RYAEAQHDAYNP 245 ++ + L G R+LI+ P L+ QW E+ RF+ RF L D + R+ E N Sbjct: 139 VIKEMKLRGLVRRILIVAPGHLRDQWQRELKERFDERFVLMDRQTMRNRFGE------NA 192 Query: 246 FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA----PSREYQAIEQ 301 +++E VI SLDFAR+ + ++ L A WDL +VDEAH + + ++ Y+ E Sbjct: 193 WESEFQVITSLDFARQ-EDVMQALAGAHWDLTIVDEAHKMAAYKYGDKMEKTKRYRLGEL 251 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 L+ + +L LTATP + E+ L LL P F Sbjct: 252 LSRNSTQLLFLTATPHRGDPENFRLFLDLLQPGAF 286 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 5/142 (3%) Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSE 564 K+L+ T LE+ +R+ G R H GM + R A F E AQV++ +E Sbjct: 494 KILIFTESRDTLDYLERRMRD-WGYRVCTIHGGMPLDARIEAEKTFKNE---AQVMVATE 549 Query: 565 IGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW 624 EG N QF M+ +D+P+NP+ LEQR+GR+ R GQ ++ I T + ++ Sbjct: 550 AAGEGINLQFCHLMINYDIPWNPNRLEQRMGRIHRYGQTREVTIFNLVAADTREGRVLHR 609 Query: 625 YHEGLDAFEHTCPTGRTIYDSV 646 E LD + R ++D + Sbjct: 610 LFEKLDEIRSALGSDR-VFDVI 630 >UniRef50_A6NWV9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NWV9_9BACE Length = 943 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 156 PHQLNIAHDVGRRH-APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 PHQ+ A + A +++ADEVGLGKTIEAG+++ Q +G +++++ P +L+ Q Sbjct: 39 PHQIEAALFAFKSPLAKGLIMADEVGLGKTIEAGLVMCQYWSTGK-HKIIVVCPASLRKQ 97 Query: 215 WLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEW 274 W E+ +F + + D + Y E NPF ++VICS FA R ++E + + Sbjct: 98 WSFELTEKFGIPNEILDSKNYNEYIRSGKNPFSQRKIVICSYYFAAR---KMEEIRLCGF 154 Query: 275 DLLVVDEAHHL--VWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLD 332 DL ++DEAH L V+ ++A + + E LA+ LLLTATP Q + + ++D Sbjct: 155 DLAIIDEAHKLRNVYKKNAKT-AHAIKEALAD--AKKLLLTATPFQNSLMELYGLTSIID 211 Query: 333 PNRFHDFAQFVEE 345 N F D F E Sbjct: 212 ENIFGDSRSFRSE 224 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 11/81 (13%) Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNP 587 GI+AA DR AA A+V++ +E +EG N QF S +V +DLP+NP Sbjct: 476 GIKAA-----------DRRAALVDYFRDTAEVMIATEAAAEGLNLQFCSLVVNYDLPWNP 524 Query: 588 DLLEQRIGRLDRIGQAHDIQI 608 +EQRIGR R GQ D+ + Sbjct: 525 QRIEQRIGRCHRYGQKSDVVV 545 >UniRef50_C1XVJ8 DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XVJ8_9DEIN Length = 916 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 11/210 (5%) Query: 131 RARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAG 188 RA S+ P+ L QR+ ++P + + PRV L+AD+VGLGKTIEAG Sbjct: 75 RALTLSALHADAPFLAL--QRSRVVPANYQLVPLLMALRQPRVRLLIADDVGLGKTIEAG 132 Query: 189 MILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD---ERYAEAQHDAYNP 245 +I + L+ G A RVL++ P L QW + R F+L F + +R A NP Sbjct: 133 LITKELLVRGKARRVLVLAPAHLLAQWQEALRRFFHLDFVVLSGSNLKRLARTLPPGANP 192 Query: 246 FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW--SEDAPSRE-YQAIEQL 302 + LVI S+D+A++ R + L + +WDL++VDEAH +E E ++ + +L Sbjct: 193 WTMHDLVIASIDYAKQDGVRPQVLFQ-DWDLVLVDEAHMAARPPTEKGSQMERFRLVREL 251 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLD 332 A VP +LL TATP ES ++ L LD Sbjct: 252 ARRVPHLLLATATPHNGYTESFYSLLEHLD 281 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%) Query: 533 VFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLE 591 VF + ER+R A VL+ +++ SEG N Q +A+ +V +DLP+NP+ LE Sbjct: 505 VFGVHGEMSEREREEVLLAFSQQKQAVLVATDVFSEGLNLQHYAARLVHYDLPWNPNRLE 564 Query: 592 QRIGRLDRIGQ 602 QR GR+DR GQ Sbjct: 565 QRNGRIDRFGQ 575 >UniRef50_Q7NGZ6 Gll2741 protein n=2 Tax=Cyanobacteria RepID=Q7NGZ6_GLOVI Length = 1066 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 110/209 (52%), Gaps = 17/209 (8%) Query: 151 RTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPE- 209 R L P+QL R R+LLAD VGLGKT++AG+++ + + A R+L++ P Sbjct: 97 RLRLEPYQLVPVLRAIRMSRVRLLLADAVGLGKTVQAGLVITELMARRIAHRILVVCPAG 156 Query: 210 TLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA---YNPFDTEQLVICSLDFARRSKQRL 266 L QW VEM RF LR + D + E + A NPFD L + S+DF ++ + L Sbjct: 157 PLLEQWKVEMSERFGLRLEVIDRAKLEEVRRGAELGANPFDHISLGLVSIDFLKQERI-L 215 Query: 267 EHLCEAEWDLLVVDEAHH---LVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMES 323 + L A +D++V+DEAHH L +E S+ + E LA +L TATP G + Sbjct: 216 DQLERASYDVVVIDEAHHCMDLGSNEREDSQRRRLAEVLARQCDAFILATATPHD-GSDR 274 Query: 324 HFARL-RLLDPNRFHDFAQFVEEQKNYRP 351 FA L LLDP+ V+ Q + RP Sbjct: 275 SFASLCELLDPS-------LVDGQGSLRP 296 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Query: 559 VLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKT 616 +L+ ++ +EG N H ++ +LPFNP+ LEQR GR+DR GQ HD + +L T Sbjct: 561 ILVSTDAAAEGLNLHQRCHQLIHLELPFNPNRLEQRNGRIDRYGQQHDPIVRYLFLRGT 619 >UniRef50_C8WXJ2 SNF2-related protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WXJ2_ALIAD Length = 572 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 16/190 (8%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQ+ A V R R +LADEVGLGKTIEAG++L + L+ G R L++VP +L Q Sbjct: 76 LPHQVETALRVVRDLRGRAILADEVGLGKTIEAGLVLKEYLVRGLVRRALVLVPASLVSQ 135 Query: 215 WLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEW 274 W E+ ++F + A Q D + ++ E +V+ S+D A+R E + W Sbjct: 136 WTKELNQKFRID---------AIPQRDEWT-WEAEGVVVASIDTAKRPPH-AERVQAQWW 184 Query: 275 DLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN 334 D+++VDEAH L ++ ++ +Q + QL +LLLTATP Q ++ + LL P Sbjct: 185 DMIIVDEAHKL---KNPSTKNWQLLNQLQHKY--MLLLTATPIQNQLKELHTLVTLLKPG 239 Query: 335 RFHDFAQFVE 344 + A+F E Sbjct: 240 ELGNPAEFAE 249 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 3/126 (2%) Query: 525 EREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLP 584 ++ GI A F G ++D F+++ +VL+ +E G EG N QF HM+ +DLP Sbjct: 410 KKHGISAVPFRGGFRRGKKDWMRELFSKK---IRVLVATESGGEGINLQFCHHMINYDLP 466 Query: 585 FNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYD 644 +NP LEQRIGR+ R+GQ H I + T + ++ E + FE I Sbjct: 467 WNPMRLEQRIGRIHRLGQTHACHIAHLVTKDTIEEHIMEILQEKVRMFEAVIGRLDDIVS 526 Query: 645 SVYNDL 650 V DL Sbjct: 527 DVRLDL 532 >UniRef50_B9LVL0 Helicase domain protein n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LVL0_HALLT Length = 969 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 110/185 (59%), Gaps = 7/185 (3%) Query: 154 LIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 L P+QL + V ++ R L+AD+VGLGKTIEAG+IL + A+RVL +VP LQ Sbjct: 108 LEPYQLACVNWVMQKLRQRALIADDVGLGKTIEAGLILKELTARNRADRVLFVVPAHLQK 167 Query: 214 QWLVEMLRRFNLRFALFDDERYAEAQH----DAYNPFDTE-QLVICSLDFARRSKQRLEH 268 +W+ +M R F++ D ++ E + + N +D + Q ++ S+ F R+ + R E Sbjct: 168 KWIRDMDRFFDIS-PTPADRQWVEGERRRLGEETNIWDQDHQQMVTSMAFLRQEEFR-EE 225 Query: 269 LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 L +A WD++VVDEAH ++PS+ + +E++A++ +LLL+ATP E+ + + Sbjct: 226 LDDAFWDVVVVDEAHKAAKRGESPSKTSKMVERVADNSDSLLLLSATPHDGKGEAFRSLI 285 Query: 329 RLLDP 333 +DP Sbjct: 286 EYIDP 290 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/285 (23%), Positives = 128/285 (44%), Gaps = 23/285 (8%) Query: 533 VFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLE 591 V H G+ +R R F +++L ++ SEG + Q + H MV ++LP+NP+ LE Sbjct: 513 VIHGGVDKEDRTRIEDEFNH--GQSRLLFATDAASEGIDLQHSCHIMVNYELPWNPNRLE 570 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI 651 QRIGRL R GQ ++ + E T +S + + +++ + + D I Sbjct: 571 QRIGRLHRYGQEKEVTVWNFSFEDTRESKVFEMLQDKVESIRGQLGNTADVLGML--DDI 628 Query: 652 NYLASPDQTEGFDDLIKNCREQHEAL----KAQLEQGRDRLLEIHSNGGEKAQALAESIE 707 N + ++ D+ +E+ E L + L + +R L + E+++ + + Sbjct: 629 NVDSLIMESIRNDEPASATKEELEELIDERQRTLAEWYERSLIDTTTFDEESRRKIQDVM 688 Query: 708 EQDDDT-----NLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGI--- 759 +Q +D +L F +G + + G+N+ +P+ S DG Sbjct: 689 DQSEDVYGSEADLREFFERGISALGGDVEKAGNNLF------RAELPESLRRSRDGDPYG 742 Query: 760 TITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLL 804 TF+RE A+ E ++I+ + L++ + +L + G+ I LL Sbjct: 743 PFTFNREFAMDHEGIEYISPDAELVQELMQQVLDSEQGTVGIKLL 787 >UniRef50_C7MHJ1 DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MHJ1_BRAFD Length = 961 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 103/192 (53%), Gaps = 12/192 (6%) Query: 156 PHQLNIA-HDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 PHQ++ A + P V+LADEVGLGKTIEAG+++ Q + R+LII P +L+ Q Sbjct: 42 PHQIDAALFALQTPFLPGVILADEVGLGKTIEAGIVI-SQYWAERKRRILIIAPSSLRQQ 100 Query: 215 WLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTE--QLVICSLDFARRSKQRLEHLCEA 272 W E+ +F + + D A+++ DT ++++CS +FA R + L Sbjct: 101 WKQELYEKFLIPSTILD----AKSKDSLLPKTDTRAAEVLVCSYEFAHRHETSLLK---- 152 Query: 273 EWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLD 332 WDL+V DEAH L + ++ +A+ +A +LLTATP Q +E + + + D Sbjct: 153 SWDLVVADEAHRLRSYWNGKAKMAEAVSHVARSAHKTVLLTATPLQNKLEELYGLVSIFD 212 Query: 333 PNRFHDFAQFVE 344 P+ F+ F E Sbjct: 213 PDYFYSLDAFRE 224 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 48/73 (65%), Gaps = 4/73 (5%) Query: 537 GMSIIERDRAAA-WFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIG 595 G+ ++R +A +F E+ T +++ +E +EG N QF S +V +DLP+NP +EQRIG Sbjct: 487 GIPAVDRRKALVDYFREQGT---IMIATEAAAEGINLQFCSMLVNYDLPWNPQRVEQRIG 543 Query: 596 RLDRIGQAHDIQI 608 R+ R GQ H++ + Sbjct: 544 RVHRFGQKHNVVV 556 >UniRef50_D1B6S6 Helicase domain protein n=7 Tax=Bacteria RepID=D1B6S6_THEAS Length = 969 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 81/227 (35%), Positives = 107/227 (47%), Gaps = 37/227 (16%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQ+ R LLADEVGLGKTIEAG+I+ + L G R L+I P+ L Q Sbjct: 95 LPHQIRALSRAISNDRVRYLLADEVGLGKTIEAGLIMRELKLRGLVRRTLVIAPKGLVTQ 154 Query: 215 WLVEMLRRFNLRFALF--DD-------------ERYAEAQHDAY----NPFDTEQLVICS 255 W+ EM FN F L DD E Q D+ N + V+ Sbjct: 155 WVAEMRAHFNEHFQLVLPDDIKTLSRISAVASPESRVSGQEDSQPVTRNSWTLFPQVVVP 214 Query: 256 LD---------------FARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 +D A +++R E L A WDL++VDEAH L S D +R Y+ + Sbjct: 215 MDSVKPLDKRRGWSREQVAEYNRERFEDLISAGWDLVIVDEAHRLGGSTDQVAR-YKLGQ 273 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARL-RLLDPNRFHDFAQFVEEQ 346 LAE P +LLL+ATP Q G F RL L+D F D + +E+ Sbjct: 274 GLAEAAPYLLLLSATPHQ-GKTDAFHRLISLVDAKAFPDVSSVTKER 319 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 4/103 (3%) Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSE 564 KVLV T L + L ER GI + M + ER R FA++ ++L+ ++ Sbjct: 499 KVLVFTEFVPTQEMLMRFLTER-GITVVCLNGSMDLEERKRVQDAFAKD---VRILISTD 554 Query: 565 IGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 G EG N QF ++ +D+P+NP LEQRIGR+DRIGQ H ++ Sbjct: 555 AGGEGLNLQFCHVVINYDIPWNPMRLEQRIGRVDRIGQTHTVR 597 >UniRef50_Q2J9F3 Helicase-like n=3 Tax=Actinomycetales RepID=Q2J9F3_FRASC Length = 1165 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 101/189 (53%), Gaps = 24/189 (12%) Query: 170 APRV--LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRF 227 APRV LLAD+VGLGKTIEAG++ + LL A R++I+ P L +W EM +F F Sbjct: 224 APRVNLLLADDVGLGKTIEAGLVAEELLLRHRARRIMIVCPAGLTLKWRDEMAEKFGRDF 283 Query: 228 ALFDDERYA---EAQHDAYNPFDTEQLVICSLDFARRSK-QRL---------EHLCEAEW 274 + D ER A + A NPF+ L I SL + R K QRL + + Sbjct: 284 TIIDAERCAAVRRSHGSAANPFEVYPLTIVSLPWLRGPKAQRLLDEVLPGDGQPTYPRTF 343 Query: 275 DLLVVDEAHHL-------VWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 DLL++DEAHH+ V++ D S++ + I +LA H L L+ATP + S A Sbjct: 344 DLLILDEAHHIAPAAPRQVYAVD--SQQTKLIRRLAPHFTHRLFLSATPHNGYLASFTAL 401 Query: 328 LRLLDPNRF 336 L +LD RF Sbjct: 402 LEILDDQRF 410 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 5/110 (4%) Query: 504 QKVLVICAKAATALQLEQVLRER--EGIRAAVFHEGMSIIERDRAAAWFAEEDT--GAQV 559 ++V+V T + L +LR+ G R + H G+S+ ER++ F E + +V Sbjct: 625 ERVVVFTEYRDTQIWLAGLLRQEGLAGERLGLLHGGLSVDEREQLRLAFQAEPSEHPMRV 684 Query: 560 LLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 LL ++ SEG + Q H +V +D+PFNP+ LEQRIGR+DR GQ +I Sbjct: 685 LLATDAASEGIDLQNHCHRLVNYDIPFNPNKLEQRIGRIDRYGQRRSPEI 734 >UniRef50_A0YV27 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YV27_9CYAN Length = 1140 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 113/205 (55%), Gaps = 19/205 (9%) Query: 140 FRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP----RVLLADEVGLGKTIEAGMILHQQL 195 F + SG+R +PHQL ++ R P R LLAD+ G GKTI AG++L + Sbjct: 91 FAVSLSGVRP-----LPHQLEAVYE---RILPQVRLRFLLADDPGAGKTIMAGLLLKELK 142 Query: 196 LSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICS 255 L A ER+LI+ P L QW E+ +F F + A+ Q A NP++ + I S Sbjct: 143 LRSAIERILILAPAPLTIQWQDELKSKFAETFEVITST-LAKNQL-AGNPWERFRQCIAS 200 Query: 256 LDFARRSKQRLEHLCEAEWDLLVVDEAHHL---VWSED-APSREYQAIEQLAEHVPGVLL 311 +DFA+R + + L + +WDL+++DEAH ED + Y+ E+L+++ +LL Sbjct: 201 IDFAKRD-EVISGLLQVDWDLVIIDEAHKCSARTQGEDLRRTGRYKLAEELSKNTERLLL 259 Query: 312 LTATPEQLGMESHFARLRLLDPNRF 336 LTATP Q ++ LRLLDP++F Sbjct: 260 LTATPHQGDVDQFHNFLRLLDPDQF 284 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 3/81 (3%) Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNP 587 G H GM++I+R A F Q+ + +E EG N QF MV +D+P+NP Sbjct: 515 GYSTCEIHGGMNVIDRKTAQKNF---QFNKQICIATEAAGEGINLQFCRLMVNYDIPWNP 571 Query: 588 DLLEQRIGRLDRIGQAHDIQI 608 + LEQR+GR+ RIGQ D+ I Sbjct: 572 NRLEQRMGRIHRIGQKRDVYI 592 >UniRef50_A0RTY1 Superfamily II DNA/RNA helicase, SNF2 family n=1 Tax=Cenarchaeum symbiosum RepID=A0RTY1_CENSY Length = 535 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 108/210 (51%), Gaps = 9/210 (4%) Query: 132 ARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHD-VGRRHAPRVLLADEVGLGKTIEAGMI 190 AR+Y P G+ +PHQ+ ++ V + H R LLA + G GKTI AG+I Sbjct: 71 ARRYRFASMYDPLLGMSASLVDPLPHQIEAVYERVLKMHRIRFLLAHDPGAGKTIMAGLI 130 Query: 191 LHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQ 250 + + + R+LI+VP L++QW E++ +F RF + + Y Q + N + E Sbjct: 131 IKELKMRNIINRILIVVPRHLEYQWSKELIEKFEERFVVV-NRSYINNQFE--NAWLKEN 187 Query: 251 LVICSLDFARRSKQRLEHLCEAEWDLLVVDEAH----HLVWSEDAPSREYQAIEQLAEHV 306 +I SLDFA++ +E L A +DL+VVDEAH L + + + Y+ E L+E Sbjct: 188 QIITSLDFAKQD-DIIESLESANFDLIVVDEAHKMSAELYGNTISKTNRYRLGESLSEIT 246 Query: 307 PGVLLLTATPEQLGMESHFARLRLLDPNRF 336 L LTATP + + L LL+P F Sbjct: 247 EHFLFLTATPHKGSPANFRFLLNLLEPGFF 276 >UniRef50_A7AJJ3 Putative uncharacterized protein n=2 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AJJ3_9PORP Length = 949 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 109/197 (55%), Gaps = 7/197 (3%) Query: 151 RTSLIPHQLNIAHDVGRRHAPR-VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPE 209 + + PHQ+ A + + +LADEVGLGKTIEAG+IL +L + R++I+VP Sbjct: 37 KVDMNPHQVEAALFAFKSPLSKGAILADEVGLGKTIEAGIIL-SELWAEHKRRIIIVVPA 95 Query: 210 TLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF-DTEQLVICSLDFARRSKQRLEH 268 +L++QW +E++ +F L + ++E Y E + N F D ++ICS +FA + + L+ Sbjct: 96 SLRNQWNLELMEKFYLPSVILENESYKEIKELDTNLFEDGRHIIICSYNFAIKHSEELQL 155 Query: 269 LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 + +WDL+V DEAH + + + +H + LLTATP Q ++ + + Sbjct: 156 V---DWDLVVFDEAHKMRNVYKKGNIIGNTMMNTFKHYKKI-LLTATPLQNNLKELYGLI 211 Query: 329 RLLDPNRFHDFAQFVEE 345 ++DP+ F F E+ Sbjct: 212 SIIDPHFFSTVDSFNEQ 228 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%) Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 G +II DR A T A++++ +E G+EG N QF S +V +D+P+NP +EQRIGR Sbjct: 480 GRTII--DRKQALVDHFRTDAEIMIATESGAEGINLQFCSLLVNYDMPWNPQRIEQRIGR 537 Query: 597 LDRIGQ 602 R GQ Sbjct: 538 CHRYGQ 543 >UniRef50_B8HYW4 Helicase domain protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HYW4_CYAP4 Length = 894 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 9/207 (4%) Query: 144 YSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERV 203 +S R L+PHQL + V R R L+AD+VGLGKTIEAG+IL + RV Sbjct: 80 WSVFSRSRVKLLPHQLWVCRKVLERWPFRWLIADDVGLGKTIEAGLILWPLISRRIVHRV 139 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSK 263 LI+ P +L QW++ + F+LRF + E A+ + + ++T V+ SL R + Sbjct: 140 LILAPASLVEQWVLRLREMFDLRFTPYTTE--ADTPRNGF--WETHNQVVASLQTLRDDR 195 Query: 264 QRLEH--LCEAEWDLLVVDEAHHLVWSE-DAPSREYQAIEQLAE--HVPGVLLLTATPEQ 318 + L WDL+++DEAHHL E + + ++ +++L E + ++ T TP + Sbjct: 196 RGRHDRLLASPPWDLIIIDEAHHLNADEVNGITLSFKLVQKLHEFQKLKSIVFFTGTPHR 255 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEE 345 S + L+LL P+ + D Q +E+ Sbjct: 256 GKDYSFLSLLKLLRPDVYEDPKQPLEK 282 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 3/67 (4%) Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIG 601 R+RA F E + A+ L+ +E EG + Q H ++ D+P+NP L QR+GRL R G Sbjct: 519 RERAIQLFNEGE--ARFLVSTEAAGEGVDLQQNCHTLIHVDIPWNPMRLHQRVGRLYRYG 576 Query: 602 QAHDIQI 608 Q H +++ Sbjct: 577 QTHKVEV 583 >UniRef50_C9RPI9 Helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RPI9_FIBSS Length = 876 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/190 (34%), Positives = 97/190 (51%), Gaps = 13/190 (6%) Query: 154 LIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 L+PHQL + V R ++AD+VGLGKTIEAG+I+ +G R+LI+ P L Sbjct: 93 LLPHQLWVCKQVLSRWPIGYVIADDVGLGKTIEAGLIMTSLFSTGKVRRILILAPAKLVG 152 Query: 214 QWLVEMLRRFNLRFALFDDERYAEAQHDAYNP--FDTEQLVICSLDFARR-SKQRLEHLC 270 QW M FNL F + E + NP + + V+ S + S R +HLC Sbjct: 153 QWQERMKSMFNLGFFAYSTEV------EKTNPDFWTSATFVVASASTMQADSHGRFDHLC 206 Query: 271 EA-EWDLLVVDEAHHLVWSEDA-PSREYQAIEQLAEH--VPGVLLLTATPEQLGMESHFA 326 +A WDL+VVDEAHH+ E + +++ E L E+ + LL T TP + ++ Sbjct: 207 DAPAWDLVVVDEAHHMNAEEQGNKTLQFKLFEMLQENGKIVSSLLFTGTPHRGKNYGFWS 266 Query: 327 RLRLLDPNRF 336 + L+ P F Sbjct: 267 LMSLVAPGVF 276 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 6/91 (6%) Query: 522 VLREREGIRAAVFHEGMS---IIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHM 578 ++ E ++ V+ +G S I R+ A F + + L+ +E EG + Q H+ Sbjct: 490 IINGDESLKDVVYPDGCSRDISISRNDACEKFNNGEV--RFLISTEAAGEGIDLQKNCHV 547 Query: 579 VM-FDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 ++ DLP+NP L QR+GR+ R+GQ HD+++ Sbjct: 548 LIHIDLPWNPMRLHQRVGRVHRLGQTHDVEV 578 >UniRef50_B8HUB7 Helicase domain protein n=16 Tax=Bacteria RepID=B8HUB7_CYAP4 Length = 1194 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 152 TSLI---PHQLNIAH-DVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIV 207 TSL+ PHQ+ + ++ R R LLAD+ G GKTI AG+ + + L+ G +R LI+ Sbjct: 100 TSLVEPLPHQITAVYSEMLTRQPLRFLLADDPGAGKTIMAGLFIRELLIRGDLQRCLIVC 159 Query: 208 PETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLE 267 P +L QW E+ ++F+L F + ++R A+ N F QLVI LD R+++ Sbjct: 160 PGSLAVQWQDELFQKFHLPFEILTNDRIQAAR--TGNAFAEMQLVIVRLDKLSRNEELQA 217 Query: 268 HLCEAEWDLLVVDEAHHLVWS----EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMES 323 L + +WDL+VVDEAH + S E ++ Y+ + LA LL++ATP E Sbjct: 218 KLGQTDWDLVVVDEAHKMSASFFGGEIRETKRYKLGKLLATLTRHFLLMSATPHNGKEED 277 Query: 324 HFARLRLLDPNRF 336 L LLD +RF Sbjct: 278 FQLFLALLDGDRF 290 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Query: 533 VFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQ 592 + H GM ER +A F ++D +VL+ ++ EG N Q A MV +DLP+NP+ LEQ Sbjct: 538 IIHGGMGRDERKKAEEGF-KQDIKVEVLVATDAAGEGINLQRAHLMVNYDLPWNPNRLEQ 596 Query: 593 RIGRLDRIGQA 603 R GR+ RIGQ Sbjct: 597 RFGRIHRIGQT 607 >UniRef50_A7HHH1 Helicase domain protein n=6 Tax=Bacteria RepID=A7HHH1_ANADF Length = 1145 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 6/210 (2%) Query: 143 PYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLLSGAA 200 PY L R +PHQL +D + PR+ LLAD+ G GKTI AG++L + + G Sbjct: 91 PYFSLSIARVDPLPHQLEAVYDYFLK-LPRIRFLLADDPGAGKTIMAGLLLKELKIRGLV 149 Query: 201 ERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFAR 260 R LI+ P L QW E+ +F +F + E Q+ NP+ V+ S+ + Sbjct: 150 TRTLIVAPANLTFQWQRELKDKFREQFDVMRGE-VLRTQY-GQNPWQERNQVVTSVSWIS 207 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHL-VWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 R + E L + WDL++VDEAH + +S D + +Q E L++ LL+TATP + Sbjct: 208 RVEDAKESLLRSSWDLVIVDEAHKMSAYSSDKKTLAFQIGEALSQRTDHFLLMTATPHKG 267 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNY 349 E+ L LLD + + D E + + Sbjct: 268 DPENFRLFLSLLDRDVYGDVKSLEEAMRRH 297 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Query: 528 GIRAAVFHEGMSIIERDRAAA-WFAEED--TGAQVLLCSEIGSEGRNFQFASHMVMFDLP 584 G+ H GM I +RD +AE + QVL+ +E EG N QF M+ +D+P Sbjct: 525 GLSVTQIHGGMQIGDRDTPGTRIYAEREFREDCQVLVATEAAGEGINLQFCWLMINYDIP 584 Query: 585 FNPDLLEQRIGRLDRIGQAHDIQI 608 +NP LEQR+GR+ R GQ D I Sbjct: 585 WNPVRLEQRMGRIHRYGQQKDCLI 608 >UniRef50_Q2RKS1 Helicase-like n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKS1_MOOTA Length = 972 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 91/286 (31%), Positives = 125/286 (43%), Gaps = 38/286 (13%) Query: 111 PQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHA 170 P ++ AG RF LR+ + +E G + +PHQL V + Sbjct: 56 PLAKMEAGSFSTASRFQLRWLVEQILAENSGEGLLAAGGFKIIPLPHQLLAVSFVLDQFK 115 Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 PRVL+ADEVGLGKTIEA +I + G +RVL++ P L QW EM +F F ++ Sbjct: 116 PRVLIADEVGLGKTIEAALIYEELKARGMVKRVLVVAPSGLCLQWREEMKTKFGEDFIIY 175 Query: 231 DDERYAEAQH---DAYNPFDTEQLVICSLDF----------------ARR--SKQRLEHL 269 D + + N + VI SLDF ARR ++Q Sbjct: 176 DRSTVHSLKQLHGEMTNVWTLADRVITSLDFIKPKKITADLDERAARARRWHNEQVFAAA 235 Query: 270 CEAEWDLLVVDEAHHLVWSEDAPSRE---YQAIEQLAEHVPGVLLLTATPEQLGMESHFA 326 A +D+++ DEAH L ++D E Y+A L + P VLLLTATP Q Sbjct: 236 AAAWFDMVIFDEAHKL--TKDMTGEETARYKAGHALVQAAPIVLLLTATPHQGDQHKFRN 293 Query: 327 RLRLLDPNRFHDFAQFVEE-------QKNYRPVADAVAMLLAGNKL 365 LRL+DP F + E + N R V D GN+L Sbjct: 294 LLRLIDPYLFSGEGRITAEDVKKVTVRNNKRAVVD-----FHGNRL 334 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 3/81 (3%) Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNP 587 G R A+ + MS ER F E A L+ ++ G EG N QF ++ +DLP+NP Sbjct: 532 GYRTALINGAMSTTERIAQVERFRRE---ADFLISTDAGGEGINLQFCHILINYDLPWNP 588 Query: 588 DLLEQRIGRLDRIGQAHDIQI 608 LEQRIGR+DRIGQ HD+++ Sbjct: 589 MRLEQRIGRIDRIGQEHDVKV 609 >UniRef50_A6P0F9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0F9_9BACE Length = 1182 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 98/326 (30%), Positives = 151/326 (46%), Gaps = 38/326 (11%) Query: 146 GLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLI 205 + R +P+Q A V + PR+L+AD VG+GKTIEAG+I+ + AE VLI Sbjct: 255 SMNSARIDFVPYQFRPALKVIQAEQPRLLVADSVGVGKTIEAGLIMKELQARSGAESVLI 314 Query: 206 IVPETL--QHQWLVEMLRRF----------NLRFALFDDER---YAEAQHDAYNPFDTEQ 250 I P+ L + +W +EM +RF +LR A+ D R + + A P+ Sbjct: 315 ICPKPLVAERKWELEM-KRFDETFTQMNSEDLRRAISDTHRDGVWPDRYRKAIVPYSI-- 371 Query: 251 LVICSLD--FARRSKQR--LEHLCEA-EWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEH 305 L +LD ARR K+ L L A ++DL++VDEAHH+ + + Y +E + Sbjct: 372 LTGATLDGVSARRGKKNYGLFDLDPAPQFDLVIVDEAHHI---RNRSTLAYAGVEFFCRN 428 Query: 306 VPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML--LAGN 363 V+LLTATP Q G ++ + L LL P+ D F + P + A + LA + Sbjct: 429 ANAVVLLTATPVQTGDDNLYTLLNLLRPDVVTDPGTF-QLMGRPNPYINKAAHIARLAQD 487 Query: 364 KLSNDELNMLGEMIGEQ------DIEPLLQAANSDSEDAQSARQELVSMLMD---RHGTS 414 + L L E Q P Q+ +R+E V ++ D H S Sbjct: 488 GWQRESLLALEEACNTQWGSRVIRNNPRYQSIREVLSQPTVSREERVGLISDIESLHSFS 547 Query: 415 RVLFRNTRNGVKGFPKRELHTIKLPL 440 ++ R R ++ F R HT+++P Sbjct: 548 GMINRTRRQDIQDFCVRHSHTLEVPF 573 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 15/129 (11%) Query: 488 DPRVEWLMGYLTSHRSQ---KVLVICAKAATALQLEQVLREREGIRAAVFHEGMS----I 540 DP+ E ++ + +++ KV++ + T L + L E +G+R + + + Sbjct: 674 DPKFEAMLRVIEEKQAESNNKVIIFSSFKHTLAYLRRKL-ESQGLRVSQIDGSVRDEDRV 732 Query: 541 IERDRAAAWFAEEDTGAQ---VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL 597 + RDR F ++ + +LL +E+G EG ++QF M+ +DLP+NP +EQRIGR+ Sbjct: 733 LLRDR----FKQDRDCPEALDILLFTEVGCEGLDYQFCDMMINYDLPWNPMRIEQRIGRI 788 Query: 598 DRIGQAHDI 606 DR GQ ++ Sbjct: 789 DRRGQKSEV 797 >UniRef50_C8X714 Helicase domain protein n=2 Tax=Actinomycetales RepID=C8X714_NAKMY Length = 1044 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 99/188 (52%), Gaps = 23/188 (12%) Query: 170 APRV--LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRF 227 APRV LLAD+VGLGKTIEAG++ + LL A R+++I P L +W EM +F F Sbjct: 135 APRVNLLLADDVGLGKTIEAGLVAVELLLRQRARRIMVICPAGLTVKWRQEMAEKFGREF 194 Query: 228 ALFDDERYA---EAQHDAYNPFDTEQLVICSLDFAR--RSKQRLEHLCEA-------EWD 275 + + E+ A A NPF L I SL + R R ++ L+ + E+D Sbjct: 195 TVVNSEQCAVLRRTHGSAANPFRVYPLTIVSLPWLRSPRGQRLLDEVLPVEGPADTREFD 254 Query: 276 LLVVDEAHHLVWSEDAPSREY-------QAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 LL++DEAHH+ + AP + Y + I +LA H L LTATP ES A L Sbjct: 255 LLILDEAHHV--APAAPKQRYAVDSQQTKLIRRLAPHFEHRLFLTATPHNGYPESFEALL 312 Query: 329 RLLDPNRF 336 L+D RF Sbjct: 313 ELVDNQRF 320 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 5/84 (5%) Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDT--GAQVLLCSEIGSEGRNFQFASH-MVMFDLP 584 G+R V H GM+ +ER+ F + T ++L+ ++ SEG + + H ++ +D+P Sbjct: 547 GVR--VLHGGMNPVERENLRQAFQADPTEDPVRILIATDAASEGIDLHWQCHRLINYDIP 604 Query: 585 FNPDLLEQRIGRLDRIGQAHDIQI 608 FNP+ LEQRIGR+DR GQ D ++ Sbjct: 605 FNPNKLEQRIGRIDRYGQRFDPEV 628 >UniRef50_A1BHU0 Helicase domain protein n=5 Tax=Bacteria RepID=A1BHU0_CHLPD Length = 967 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 18/226 (7%) Query: 145 SGLRGQRTSLIPHQLNIAHDVGRRHAPR-VLLADEVGLGKTIEAGMILHQQLLSGAAERV 203 + L+ L PHQ+ A + + LLADEVGLGKTIEAG+IL Q+ + ++ Sbjct: 31 ASLQDATVDLNPHQVEAALFAFKSPLSKGALLADEVGLGKTIEAGIILSQK-WAERKRKL 89 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAE-AQHDAYNPFDTEQLVICSLDFARRS 262 LII P L+ QW E+ +F L + + + + + + NPF+ +++ICS FAR Sbjct: 90 LIIAPANLRKQWNQELADKFFLPSTIIEAKSFNQIIRSGNLNPFEQNEILICSYQFARAK 149 Query: 263 KQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGME 322 + L H+ +WDL+++DEAH L ++ ++I+ H V LLTATP Q + Sbjct: 150 ETWLRHI---QWDLVIIDEAHRLRNVYRPDNKIGKSIKSALAHTQKV-LLTATPLQNSLL 205 Query: 323 SHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSND 368 + + ++D F D F + NY + GN+ ND Sbjct: 206 ELYGLVSIIDDYTFGDLKSF---KTNYARI--------GGNEQYND 240 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 4/67 (5%) Query: 549 WFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 WF E A +++ +E +EG N QF S +V +DLP+NP +EQRIGR R GQ D+ + Sbjct: 499 WFRNE---ATIMIATEAAAEGINLQFCSLVVNYDLPWNPQRIEQRIGRCHRYGQKFDVVV 555 Query: 609 HVPYLEK 615 + +L K Sbjct: 556 -INFLNK 561 >UniRef50_C7NT14 Helicase domain protein n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NT14_HALUD Length = 971 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/186 (36%), Positives = 105/186 (56%), Gaps = 9/186 (4%) Query: 154 LIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 L P+QL + V ++ R L+ D+VGLGKTIEAG+IL + A+RVL +VP LQ Sbjct: 110 LEPYQLACVNWVMQKLRQRALIGDDVGLGKTIEAGLILKELSARNRADRVLFVVPAHLQK 169 Query: 214 QWLVEMLRRFNLRFALFD------DERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLE 267 +W+ +M R F++ + D + R + + +N D +QLV S+ F R+ + R Sbjct: 170 KWIRDMDRFFDVDLTVADRAWVEGERRRLGEEANIWNQ-DQQQLV-TSMAFLRQEEFR-S 226 Query: 268 HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 L +A WD++VVDEAH D+PS+ +E +A + +LLL+ATP E+ + Sbjct: 227 ALRDAFWDVVVVDEAHKAAKRGDSPSKTANMVETVAGNSDSLLLLSATPHDGKGEAFRSL 286 Query: 328 LRLLDP 333 + +DP Sbjct: 287 VEYIDP 292 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 27/264 (10%) Query: 557 AQVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEK 615 +++L ++ SEG + Q + H M ++LP+NP+ LEQRIGR+ R GQ ++++ + Sbjct: 537 SRLLFATDAASEGIDLQHSCHIMANYELPWNPNRLEQRIGRIHRYGQDREVKVWNFLFDD 596 Query: 616 TAQSVLVRWYHEGLDAFEHTCPTGRTI--------YDSVYNDLINYLASPDQT-EGFDDL 666 T +S + ++ + DS+ + I P T E +DL Sbjct: 597 TRESEIFEMLQTKVEEIRSKLGNTADVLGILDDIDVDSLIMESIQNDEPPSATKEELEDL 656 Query: 667 IKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDD----DTNLIAFAMNL 722 I+ E+ L+ E+ L++ + E + + E ++E +D ++ F Sbjct: 657 IE---ERQRTLEEWYERS---LVDTSTFDAESRRQIQEVVDESEDVYGSAGDIREFFEQA 710 Query: 723 FDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGI--TITFDREVALAREDAQFITWE 780 + G + RG N+ + + PD ED TFDRE A+ E+ F+ + Sbjct: 711 VEAFGGEFEKRGTNLYQAELPEDIRPPD-----EDATFGPFTFDREFAMEHEEITFVAPD 765 Query: 781 HPLIRNGLDLILSGDTGSSTISLL 804 +++ + +L D G + LL Sbjct: 766 TDVLQRLMARVLEFDRGDVGLKLL 789 >UniRef50_Q05ZJ6 Putative DEAD/H helicase n=1 Tax=Synechococcus sp. BL107 RepID=Q05ZJ6_9SYNE Length = 1076 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 80/257 (31%), Positives = 130/257 (50%), Gaps = 35/257 (13%) Query: 120 IDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLI---PHQLNIAHDVGRRHAPRVLLA 176 ID R Y + +S+ +P + G+ TS + PHQ + ++ PR+L+A Sbjct: 269 IDERRRIVWSYVLQAAASD---LPGAERVGEGTSAVTPWPHQQRAFQRLWQQWPPRLLIA 325 Query: 177 DEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA 236 DEVGLGKT++AG++L Q LSG A R+L++ P ++ QW E+ +F L + ++ + Sbjct: 326 DEVGLGKTVQAGLLLRQAWLSGRARRMLVMAPASVLKQWQRELREKFGLDWPIYSG-KSL 384 Query: 237 EAQHDAYNP-----------FDTEQLVICSLDFARRSKQRLEHLCEAE-WDLLVVDEAHH 284 + Q + P + E V+ S RR + R + L EAE +DL+V+DEAHH Sbjct: 385 DWQPTRFRPDGLSRPVDRSSWTAEPYVLVSSHLMRR-RDRHKDLLEAEPYDLVVLDEAHH 443 Query: 285 LVWSEDA---------PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLD--- 332 + P+ Q ++QL++ G+LLLTATP Q+ + L LL Sbjct: 444 ARTRRENSSSGGERLRPNTLMQLMQQLSQRTNGLLLLTATPMQVSELEVWDLLALLGMPP 503 Query: 333 ---PNRFHDFAQFVEEQ 346 + F F ++VE++ Sbjct: 504 EWTEDAFERFFEWVEKE 520 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 1/85 (1%) Query: 553 EDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD-IQIHVP 611 ++ A++LLC++ +EG NFQF ++ +D+P+NP +EQRIGR+DRIGQ H+ +QI Sbjct: 825 KEGNAEILLCTDAAAEGLNFQFCGALINYDMPWNPMRVEQRIGRIDRIGQTHEQMQIVNL 884 Query: 612 YLEKTAQSVLVRWYHEGLDAFEHTC 636 +L+ T ++ + R + FE Sbjct: 885 HLDGTVEADVYRALKGRIAMFEQVV 909 >UniRef50_D1P919 Helicase n=1 Tax=Prevotella copri DSM 18205 RepID=D1P919_9BACT Length = 966 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 106/215 (49%), Gaps = 23/215 (10%) Query: 151 RTSLIPHQLNIA-HDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPE 209 R L PHQ+ A + V+LADEVGLGKTIEAG+++ Q + R+LI+ P Sbjct: 39 RVDLNPHQVMAALFAFQSPFSKGVILADEVGLGKTIEAGIVI-SQFWAERKRRILIVAPA 97 Query: 210 TLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHL 269 TL+ QW +E+ +F L + + ++ H + D +Q+ ICS FA R + E L Sbjct: 98 TLRRQWSMELEEKFFLDSFILEKKKGISLDHLS----DGKQIYICSYQFASR---QAEIL 150 Query: 270 CEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGV------LLLTATPEQLGMES 323 WDL+V DEAH L Y+A +A + LLLTATP Q +E Sbjct: 151 SRTHWDLVVYDEAHKL-------RNVYKATPSMASRLKSAFSDSHKLLLTATPLQNNIEE 203 Query: 324 HFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAM 358 + + ++D + F D F + Q Y D +A Sbjct: 204 LYGLVSIIDDHYFGDLKSF-KAQYCYSNKNDDIAF 237 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 95/188 (50%), Gaps = 20/188 (10%) Query: 515 TALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQF 574 T+ ++ + +ER I + F +S +R +F +E A++++ +E SEG N QF Sbjct: 472 TSRKIYKAWKER-NIGTSAFTPSLSANKRQAIVDYFRDE---AEIMIATEAASEGINLQF 527 Query: 575 ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYH---EGLDA 631 S +V +DLP+NP +EQRIGR R GQ +D+ + ++ K A + VR + E Sbjct: 528 CSLIVNYDLPWNPQRVEQRIGRCHRYGQKNDVVV-FNFINK-ANAADVRVFQLLSEKFHL 585 Query: 632 FEHTCPTGRTIYDSVYN---------DLINYLASPDQTEGFDDLIKNCREQHEALKAQLE 682 F+ + + S+ + ++ +P++ DLI+ +E ++KA ++ Sbjct: 586 FDGVFGSSDEVLGSIESGVDFEKRMLNIYQQCRTPEEINAAFDLIQ--QEMDASIKATMQ 643 Query: 683 QGRDRLLE 690 R +LLE Sbjct: 644 DTRKQLLE 651 >UniRef50_C4G029 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G029_ABIDE Length = 1112 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 26/199 (13%) Query: 142 MPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAE 201 + + L G + L+PHQLN + R +L DEVG+GKTIEA +L LL+ + + Sbjct: 163 LGFKELAGCKIYLMPHQLNTIMRCNQEKHCRYMLTDEVGMGKTIEASAVLKLFLLNNSNK 222 Query: 202 RVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARR 261 +VLIIVP+ L+ QW VE+ +F++ A+ + N E +F Sbjct: 223 KVLIIVPDGLKEQWRVELFLKFDI----------AQGKDANGNNVSLESFS----EFINV 268 Query: 262 SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGM 321 + + +D +VVDE H L+ S+D Y ++ +LLL+ATP Q Sbjct: 269 NDDK-------AYDFVVVDEVHRLL-SDDY----YSKFHTISRKADNILLLSATPLQRRT 316 Query: 322 ESHFARLRLLDPNRFHDFA 340 + LRLLDP ++ D++ Sbjct: 317 SDYLNLLRLLDPYKYDDYS 335 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 13/206 (6%) Query: 486 NFDPRVEWLMGYLTSHRSQKVLVICAKAATALQL-----EQVLREREGIRAAVFHEGMSI 540 +++ R+ ++ YL + +VI +L EQ+ +E E + F+ MS Sbjct: 556 DYEDRMLKVIDYLDQELYKGKIVIFTSFQETFELYRDVLEQIYKEEE---LSFFNSDMSS 612 Query: 541 IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI 600 E + F E T ++LLC + G EGRNFQ A +++ DLP++ + +EQRIGRLDR+ Sbjct: 613 DELELNVYRFQNEKT-CRILLCDKSGGEGRNFQVADYIIHLDLPWDANEIEQRIGRLDRL 671 Query: 601 ---GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASP 657 Q ++ V E++ + L ++++GL+ FE + + + + N + + +AS Sbjct: 672 ERDPQRPEVNSVVVVSEESLEQQLFEFWNKGLNVFEESLSGLEIVLEDINNQMFSAIAS- 730 Query: 658 DQTEGFDDLIKNCREQHEALKAQLEQ 683 D G + + + E LK ++++ Sbjct: 731 DIRYGLFNAVSSILETTTQLKKEIKR 756 >UniRef50_D2PYT4 Type III restriction protein res subunit n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PYT4_9ACTO Length = 1078 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/198 (34%), Positives = 93/198 (46%), Gaps = 32/198 (16%) Query: 145 SGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVL 204 +G+ + HQ++ A + R R LLADEVG+GKTI+AGM++ Q L+ R+ Sbjct: 149 TGIMSAGVRMHAHQISAALRIIRDPVQRYLLADEVGMGKTIQAGMVMRQVLIDAPGRRIG 208 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQ 264 IIVP+ L QW E+ +F L D + D E V Q Sbjct: 209 IIVPDALVAQWQAELRDKFYL---------------DDFPTVDAESPV-----------Q 242 Query: 265 RLEHLCEAEW------DLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 L H W DLLVVDEAH L + + Y+ + +A P VL+L+ATP Sbjct: 243 VLGHGEPERWSGFDGVDLLVVDEAHLLARTPGPDASPYRELAAVAHAAPRVLMLSATPFS 302 Query: 319 LGMESHFARLRLLDPNRF 336 G +H A L LLDP F Sbjct: 303 RGAVTHLALLHLLDPQLF 320 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 98/228 (42%), Gaps = 24/228 (10%) Query: 500 SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDR---AAAWFAEEDTG 556 S K +V C + + A L + EG+ V S +E +R AAW A+ Sbjct: 567 SKAPAKAIVFCGRGSLAGDLADRIPVGEGMVKHVHAHLGSQVEAEREQATAAWLAD---- 622 Query: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKT 616 VL+ E G GRNFQ A +P NP+ LEQRIGRLDR G Q V + Sbjct: 623 GGVLVVDETGDVGRNFQEADLAFHIRIPGNPNALEQRIGRLDRYGNQRAAQQFV-VADDD 681 Query: 617 AQSVLVRWYHEGLDAFEHTCPTGRTIYD---SVYNDLINYLASPDQTEGFDDLIKNCREQ 673 + W ++ F I+D S + ++ + LA T D ++ E+ Sbjct: 682 RDGISTAWLTLLVNGF--------GIFDASTSAFQEVADKLAGDVWTALLTDGVEALLER 733 Query: 674 HEALKAQLEQGRDRL-----LEIHSNGGEKAQALAESIEEQDDDTNLI 716 E +KA L + + R+ LE NG + +A +I ++D+ I Sbjct: 734 SEPIKAALLREKRRINELDALEASFNGQSDGEEMARAIAAYEEDSAGI 781 >UniRef50_C7IJW2 SNF2-related protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IJW2_9CLOT Length = 1125 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 96/351 (27%), Positives = 155/351 (44%), Gaps = 53/351 (15%) Query: 19 LGTVVAVD--ARTVTLLFPSTGENRLYAR--------SDSPVTRVMFNPGDTITSHDGWQ 68 +G + +D A TVTL F R Y S + VTR G T+ +D Sbjct: 24 MGQITEIDKFAETVTLKFNDPYSFRKYYEFFPETIKCSINSVTRCKIFEG-TVVQYDFKS 82 Query: 69 MQV-EEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLV-FSKPQDRLFAGQIDRMDRF 126 QV + +K ENG TY +D + +++V DS + F+ + ++ + Sbjct: 83 FQVIKAIKGENGWYTYYLQAVDDK----IIKKVREDSIIAPFNSCEVEPHVQLMNYEFQN 138 Query: 127 ALRYRARKYSSEQFRM------PYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 + Y R ++ + L G + L+PHQL+ + R +LADEVG Sbjct: 139 PIWYIGRTIVDRTMQILENSVYGFKVLAGCKIFLMPHQLHTIMRCLQETKCRYMLADEVG 198 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEA +L L RVLIIVP TL +QW VE+ +F++ Sbjct: 199 LGKTIEACSVLKIFLSQNFNARVLIIVPNTLLNQWKVELYVKFDIM-----------VNE 247 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 D N +VI S++ + +WD ++VDE H L+ + +Y I Sbjct: 248 DIVNG----NMVITSIENLPLNSDIY------KWDFVIVDEVHRLL----SKPEQYNLIH 293 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFH-----DFAQFVEEQ 346 +++ +LLL+ATP Q + L+L+ P +++ +F+ +E+Q Sbjct: 294 KISASTDNILLLSATPVQQKKNEYLKLLKLIMPEKYNSMTEDEFSVLLEKQ 344 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 55/155 (35%), Positives = 82/155 (52%), Gaps = 4/155 (2%) Query: 531 AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLL 590 A F++ MS E + F + DT ++LC E G EGRNFQ A ++ DLP++ + + Sbjct: 613 CAFFNKKMSTEELELNVFRF-QNDTSCFIMLCDESGGEGRNFQCADSVLHIDLPWDANAI 671 Query: 591 EQRIGRLDRIGQ--AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYN 648 EQRIGRLDRIG+ D++ V Y T + L R+++EGL+ F H+ +G I S N Sbjct: 672 EQRIGRLDRIGRDLNRDVKSVVIYTHDTIEEQLFRFWNEGLNVFNHSL-SGLEIIMSEIN 730 Query: 649 DLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQ 683 D I D G I + + +K +E+ Sbjct: 731 DNIVSAVQKDTKYGLSGAIDTIIQLSKDMKNAVER 765 >UniRef50_A3JUX8 Helicase n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JUX8_9RHOB Length = 963 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 109/204 (53%), Gaps = 13/204 (6%) Query: 147 LRGQRTSLIPHQLNIA-HDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLI 205 L R + PHQ+N A + + VLLADEVGLGKTIEAG+++ Q++ G R L+ Sbjct: 44 LTSSRVEMNPHQVNAALFALKSPFSKGVLLADEVGLGKTIEAGLVISQRIAEG-KRRQLL 102 Query: 206 IVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF--DTEQLVICSLDFARRSK 263 +VP +L+ QW E+ +F+++ + D +++ + P ++ +I S +FA R Sbjct: 103 VVPASLRKQWQQELFEKFSIKTDIVDSTVVRRSEYLSAKPLLEAAQKPLIMSYEFAARLA 162 Query: 264 QRLEHLCEAEWDLLVVDEAHHL--VWSED---APSREYQAIEQLAEHVPGVLLLTATPEQ 318 +E +C WDL V+DEAH + V+ + S+ QA+ + P + LLTATP Q Sbjct: 163 DEIE-IC--RWDLAVLDEAHRMRNVYKNEIKPGSSKRSQALSRALRRTPKI-LLTATPLQ 218 Query: 319 LGMESHFARLRLLDPNRFHDFAQF 342 + + + ++D + F F Sbjct: 219 NSLLELYGLISVIDDHAFGGVESF 242 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 14/131 (10%) Query: 545 RAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 +AA A + + +++ +E G+EG N QF S ++ FDLP+NP +EQRIGR R GQ Sbjct: 501 KAALVEAFKSSNKSIMISTESGAEGINLQFCSVLINFDLPWNPQRIEQRIGRCHRYGQKI 560 Query: 605 DIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFD 664 D+ T ++L R H FE + ++D V+ L + + F+ Sbjct: 561 DV---------TVVNMLNRKNHTEARIFELLNEKFK-LFDGVFGSSDEVLGTIESGLDFE 610 Query: 665 D----LIKNCR 671 +++NCR Sbjct: 611 KSILRIVQNCR 621 >UniRef50_Q2LTY5 Snf2-related protein with C-terminal Helicase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTY5_SYNAS Length = 1178 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 79/223 (35%), Positives = 108/223 (48%), Gaps = 28/223 (12%) Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP----RVLLADEVGLGKT 184 R R +QF + SG+R +PHQ+ V R P R LLAD+ G GKT Sbjct: 91 RIRLAYAHDQQFAVSLSGIR-----TLPHQIEA---VYRAMLPQPRLRFLLADDPGAGKT 142 Query: 185 IEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYN 244 I AG+++ + L A ER+LI+ P L QW EMLR F F + A Q N Sbjct: 143 IMAGLLVKELKLREAIERILILCPAPLTIQWQDEMLRWFGEPFDIIFS---AVDQQQLTN 199 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW----------SEDAPSR 294 P+ +I S+D+A++ R E + + WDL+++DEAH S+ ++ Sbjct: 200 PWQRSSQIIASIDYAKQEDVR-ERVWQQRWDLVIIDEAHKCSARTASGGQNRESKVTTTK 258 Query: 295 EYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR-LRLLDPNRF 336 Y L VLLLTATP G E FA LRL+DP+ F Sbjct: 259 RYDLALHLTYQADHVLLLTATPHH-GDEDKFAHFLRLIDPDLF 300 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 3/82 (3%) Query: 525 EREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLP 584 ER G H GM+ ER RA F TGAQV + +E EG N QF M+ +D+P Sbjct: 538 ERWGFSTCEIHGGMNPHERKRAQEVFR---TGAQVCIATEAAGEGINLQFCHLMINYDMP 594 Query: 585 FNPDLLEQRIGRLDRIGQAHDI 606 +NP LEQR+GR+ RIGQ D+ Sbjct: 595 WNPTRLEQRLGRIHRIGQDRDV 616 >UniRef50_B7RY95 Type III restriction enzyme, res subunit family n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY95_9GAMM Length = 1180 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 100/369 (27%), Positives = 161/369 (43%), Gaps = 61/369 (16%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 D+F + AR+ YS L R IP+Q R PR+L+AD VG+G Sbjct: 215 FDQFNAQLSARQIQHPSLSTLYS-LNAARVDFIPYQFRPVMKFIRSDRPRLLIADGVGVG 273 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETL--QHQWLVEMLRRFNLRFALFDDE------- 233 KTIEAG+IL + + VLII P L + +WL EM RRF+ RF D + Sbjct: 274 KTIEAGLILRELQARREIKSVLIICPRPLITEKKWLNEM-RRFDERFTQLDGKTLKFCVQ 332 Query: 234 ------RYAEAQHDAYNPFD--TEQLVICSLDFARRSKQRLEHLCE----AEWDLLVVDE 281 + + P+ E L+ D RS + + L + ++DL++VDE Sbjct: 333 ECDLEGEWPDQHEKTIIPYSLLDESLIHGDQDSNSRSSKSQKGLLDLDPPPKFDLVIVDE 392 Query: 282 AHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDP-------- 333 AHH +++ ++ ++A+ ++ V+ LTATP QLG + + L +L P Sbjct: 393 AHH---AKNPNTQTHEAVRFFCDNAEAVVFLTATPVQLGSKDLYVLLNMLRPDVVIDEES 449 Query: 334 -----------NRFHDFAQFVE---EQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 NR +FA+ E + + + +A + G+K+ D + Sbjct: 450 FNHMSGPNPSINRAVEFARSASEGWEAQAWEAMQEAASTEW-GSKILKDNPEFV------ 502 Query: 380 QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 D+E LL + + +A Q+L H S ++ R R + F RE T +P Sbjct: 503 -DLEGLLASGRLSPQQRVAAIQQLEGF----HSFSGLINRTRRRDIGEFTVREPRTESVP 557 Query: 440 LPTQYQTAI 448 T+ Q+A+ Sbjct: 558 F-TKAQSAL 565 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/44 (61%), Positives = 34/44 (77%) Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 VLL SE+G EG ++QF MV +DLP+NP +EQRIGR+DR GQ Sbjct: 734 VLLFSEVGCEGLDYQFCDAMVNYDLPWNPMKIEQRIGRIDRNGQ 777 >UniRef50_C5VAI1 Helicase domain protein n=2 Tax=Corynebacterium matruchotii RepID=C5VAI1_9CORY Length = 1167 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 10/201 (4%) Query: 143 PYSGLRGQRTSLIPHQLNIAHDVGRRHAP-RVLLADEVGLGKTIEAGMILHQQLLSGAAE 201 P + +PHQ+ ++ P R LLAD+ G GKTI AG+ L + +L + E Sbjct: 101 PMVAVNSSDVDPLPHQIRAVYEELLPRVPLRFLLADDPGAGKTIMAGLYLKELILRSSCE 160 Query: 202 RVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARR 261 R +I+VP L QW E+ ++F+L F +F+ NPF+ +I +D R Sbjct: 161 RAIIVVPGGLVEQWRDELAQKFDLHFEVFN---ATSDDSTGKNPFEAHPYLIVRMDQIAR 217 Query: 262 SKQRLEHLCEAEWDLLVVDEAHHL-----VWS-EDAPSREYQAIEQLAEHVPGVLLLTAT 315 + + + L + +WD+ +VDEAH + +W+ E ++ ++ + L+E LL+TAT Sbjct: 218 NDRLMRLLEQVKWDVAIVDEAHRMAAHYSLWAGEINATKRFKLGQLLSETAHNFLLMTAT 277 Query: 316 PEQLGMESHFARLRLLDPNRF 336 P E + + LLD +RF Sbjct: 278 PHSGKEEDFQSFMSLLDRDRF 298 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 3/106 (2%) Query: 499 TSHRSQKVLVICAKAATALQLEQVLREREGIRAAV--FHEGMSIIERDRAAAWFAEEDTG 556 T+ ++K+++ T LE + + G AV H G R FA D Sbjct: 493 TNGENRKIIIFTEHRDTLTYLEDKITTQLGSTDAVVTIHGGTPRHLRQAIREQFAH-DPR 551 Query: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 VLL ++ EG N Q A MV +DLP+NP+ +EQR GR+ RIGQ Sbjct: 552 TLVLLATDAAGEGLNLQRAHLMVNYDLPWNPNRIEQRFGRIHRIGQ 597 >UniRef50_B9T918 ATP-dependent helicase, putative n=1 Tax=Ricinus communis RepID=B9T918_RICCO Length = 1167 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 99/180 (55%), Gaps = 17/180 (9%) Query: 173 VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD 232 +L+AD+VGLGKTIEAG+++ + LL A VLI+ P +LQ +W VEML +F L F + D Sbjct: 64 LLIADDVGLGKTIEAGLVIQEMLLRHRARTVLIVCPASLQEKWRVEMLEKFGLEFRVVDT 123 Query: 233 ERYAEAQHDA---YNPFDTEQLVICSLDFARRSKQRLEHLCEA---------EWDLLVVD 280 + + + NP+ + +I S+D+ +S + L + + ++D+LVVD Sbjct: 124 AYIKQLRRERGIHANPWTSHPRLIASMDWV-KSGEGLRAMRDVLPAHTSYPRKFDMLVVD 182 Query: 281 EAHHLVWSEDA----PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 EAH++ + A S+ + I ++ H L LTATP ES + L LLD RF Sbjct: 183 EAHNIAPATGANYALESQRTRFIRSISPHFQHRLFLTATPHNGYTESFTSLLELLDDQRF 242 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 68/120 (56%), Gaps = 8/120 (6%) Query: 491 VEWLMGYLTSH---RSQKVLVICAKAATALQLEQVLRERE--GIRAAVFHEGMSIIERDR 545 ++WL L + ++V++ T + ++L + G R A+ H GM+ ER++ Sbjct: 428 LDWLTANLKTDGQWNDRRVILFTEYRTTHQWMHEILASHDFGGDRLAILHGGMAQDEREK 487 Query: 546 AAAWF--AEEDTGAQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 A F + +D+ ++LL ++ SEG + Q + ++ ++P+NP+++EQR GR+DR GQ Sbjct: 488 VKAAFQTSPKDSAVRILLATDAASEGIDLQNHCNCLIHLEIPYNPNVMEQRNGRIDRHGQ 547 >UniRef50_Q9KE87 SNF2 helicase n=1 Tax=Bacillus halodurans RepID=Q9KE87_BACHD Length = 577 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 16/190 (8%) Query: 156 PHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQW 215 P Q A V R +LADEVGLGKTIEAG+I+ + L+ G VLI+VP L QW Sbjct: 54 PWQYETAIKVLRDMQGSAILADEVGLGKTIEAGLIIKELLVRGLINSVLILVPAPLVEQW 113 Query: 216 LVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWD 275 EM +F ++ +E + E + L+I S+ + RSK+R E + + +D Sbjct: 114 RDEMNDKFKIQLTDLKEEGWEE-----------QNLLISSMPYLVRSKKRQEIINKRTFD 162 Query: 276 LLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNR 335 LLVVDEAH L ++ ++ Y+ + + ++ LL++ATP Q M F + +L P Sbjct: 163 LLVVDEAHCL---KNHRTQTYKFVYTIQKN--NTLLMSATPIQNDMRELFNLVNILKPGF 217 Query: 336 FHDFAQFVEE 345 +F E+ Sbjct: 218 LKSRKKFREQ 227 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 2/102 (1%) Query: 508 VICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGS 567 ++ ++ + L L E +H +S E+ ++ F ++ AQV + SE G Sbjct: 381 IVYSEYRVTIDLLSELLEEHDFTVTTYHGRLSSREKQQSIERFKNKE--AQVFISSESGG 438 Query: 568 EGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 +G N QF ++ FDLP+NP +EQRIGR+ R GQ +D++I+ Sbjct: 439 QGLNLQFCRRLINFDLPWNPMRIEQRIGRVHRFGQVNDVEIY 480 >UniRef50_A1W7Y8 Helicase domain protein n=6 Tax=Proteobacteria RepID=A1W7Y8_ACISJ Length = 1046 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 99/180 (55%), Gaps = 17/180 (9%) Query: 173 VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD 232 +L+AD+VGLGKTIEAG+++ + LL A VLII P +LQ +W +EML +F L F + D Sbjct: 142 LLIADDVGLGKTIEAGLVIQEMLLRHRARTVLIICPASLQEKWRIEMLEKFGLDFRVVDT 201 Query: 233 ERYAEAQHDA---YNPFDTEQLVICSLDFARRSKQRLEHLCEA---------EWDLLVVD 280 + + + NP+ + +I S+D+ +S + L + + ++DLLVVD Sbjct: 202 AYIKQLRRERGIHANPWTSHPRLIASMDWV-KSGEGLRAMRDVLPPHAGHPRKFDLLVVD 260 Query: 281 EAHHLVWSEDA----PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 EAH++ + A S+ + I ++ H L LTATP ES + L LLD RF Sbjct: 261 EAHNIAPAAGAHYALESQRTRFIRAISPHFQHRLFLTATPHNGYTESFTSLLELLDDQRF 320 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 3/78 (3%) Query: 528 GIRAAVFHEGMSIIERDRAAAWF--AEEDTGAQVLLCSEIGSEGRNFQ-FASHMVMFDLP 584 G R + H G++ ER+ A F + +D+ ++LL ++ SEG + Q + ++ ++P Sbjct: 548 GERLGLLHGGLTQDEREPIKAAFQASPKDSPVRILLATDAASEGIDLQNHCNCLIHLEIP 607 Query: 585 FNPDLLEQRIGRLDRIGQ 602 +NP+++EQR GR+DR GQ Sbjct: 608 YNPNVMEQRNGRIDRHGQ 625 >UniRef50_A7HA03 Helicase domain protein n=6 Tax=Cystobacterineae RepID=A7HA03_ANADF Length = 921 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/148 (41%), Positives = 83/148 (56%), Gaps = 7/148 (4%) Query: 173 VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD 232 +LADEVGLGKT+EAG++L Q G R +I+VP +L+ QW E+ +F L + D Sbjct: 72 AVLADEVGLGKTVEAGIVLAQLAAEGKG-RAVILVPASLRAQWREELRSKFGLEAEVVDG 130 Query: 233 E--RYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 + R E Q NPFDT +VICS FA + +E + WD+ V+DEAH L + Sbjct: 131 DSVREKERQGLRTNPFDTGGIVICSHPFAALRQADIERV---PWDVAVIDEAHRLRNAYR 187 Query: 291 APSREYQAIEQLAEHVPGVLLLTATPEQ 318 R QA+ + P LLLTATP Q Sbjct: 188 KDHRTGQALRKALRKAPK-LLLTATPLQ 214 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 25/51 (49%), Positives = 36/51 (70%) Query: 558 QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 Q+L+ +E G+EG N QF + +V +DLP+NP +EQRIGR R GQ D+ + Sbjct: 489 QILIMTEAGAEGLNLQFCNLVVNYDLPWNPQRVEQRIGRCHRYGQQRDVLV 539 >UniRef50_A4YAV4 Helicase domain protein n=5 Tax=Proteobacteria RepID=A4YAV4_SHEPC Length = 877 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 73/198 (36%), Positives = 107/198 (54%), Gaps = 21/198 (10%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQ+++ H + + L+AD+VGLGKTIE GM+L+ G A+R+L+I P L Q Sbjct: 96 LPHQIHLVHRILNSGSLDWLIADDVGLGKTIETGMLLYALQQRGQAKRILLITPAGLTRQ 155 Query: 215 WLVEMLRRFNLRFALFDDERYAEAQHDAYNP--FDTEQLVICSLDFARRSKQRLEHLCEA 272 W EM + +F L D + Y + H + P + VI S+D + + LE L +A Sbjct: 156 WQEEM----HDKFGLGDFQIYGHSFH-IHEPREWKMHDHVIASID-KLKQESHLELLLQA 209 Query: 273 E-WDLLVVDEAHHLVWSEDAPSREYQAIEQL--------AEHVPGVLLLTATPEQLGMES 323 + WDL+V DEAH L S Y E+ ++ +LLLTATP Q GM+ Sbjct: 210 DAWDLVVFDEAHRL--SRRQYGLHYDTSERFNLAHSLRRSKKARSILLLTATPHQ-GMQD 266 Query: 324 HF-ARLRLLDPNRFHDFA 340 F + L LL P+R ++FA Sbjct: 267 KFISLLELLRPDRKNEFA 284 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 5/113 (4%) Query: 498 LTSHRSQKVLVICAKAATALQLEQVLREREG-IRAAVFHEGMSIIERDRAAAWFAEEDTG 556 L + ++K+L+ AT +++ + + G + + H GMS ER R W + D Sbjct: 462 LKDNPNEKILIFSEYRATQEYIKEAITGQFGEDKVVLLHGGMSHDER-RDVIW--QFDNE 518 Query: 557 AQVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 Q L+ +E G EG N Q H MV +DLP+NP L QRIGRL R GQ + + Sbjct: 519 VQFLISTEAGGEGINLQQHCHTMVNYDLPWNPMRLVQRIGRLYRYGQQKKVVV 571 >UniRef50_Q1GPS5 Type III restriction enzyme, res subunit n=1 Tax=Sphingopyxis alaskensis RepID=Q1GPS5_SPHAL Length = 1044 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 97/320 (30%), Positives = 142/320 (44%), Gaps = 44/320 (13%) Query: 18 GLGTV-VAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEV-- 74 G+G + A + R V +F S + S V R +P D +M+V + Sbjct: 10 GVGKLQSAAEGRCVVSIFHSIQRSEDIECEVSAVVRAYLSPQTRAYVLDDGRMRVGRISD 69 Query: 75 --KEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRA 132 ++ENGL+TY + ++ + ++F+ P + L AG + + Sbjct: 70 YLQQENGLVTYEVRFPNGKQKDFSEIDLFVRPWNAPEDPAEMLAAGAAESQ----YLHDR 125 Query: 133 RKYSSEQFRMPYSGLRGQRTSL------IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIE 186 R+ + R S +G + L +PHQ+ V R LLADEVGLGKTIE Sbjct: 126 RQAALTPLRSLTSAAQGLTSLLSAGIDFVPHQVAAVRRVLSDPIQRYLLADEVGLGKTIE 185 Query: 187 AGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF 246 AG+I+ Q L+ VLI P L QW E+ + L +++ E PF Sbjct: 186 AGLIIRQHLIDNPDTEVLIATPSALCEQWRRELSEKLRL-------DQFGE-------PF 231 Query: 247 DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAP-SREYQAIEQLAEH 305 + C S +E + D+LVVDEAHHLV ED P S + +LA Sbjct: 232 EC-----C-------SHAEIERVARTP-DVLVVDEAHHLVGLEDGPLSASAARLRELARD 278 Query: 306 VPGVLLLTATPEQLGMESHF 325 VP +LLL+ATP LG E+ F Sbjct: 279 VPVLLLLSATPP-LGEEARF 297 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 28/51 (54%) Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 VL+ EG N F+ +V DLP + +EQRIGRLDR G+ I H Sbjct: 592 VLIGDRTAEEGLNLSFSDAIVHLDLPLSAARIEQRIGRLDRYGRRQGIIRH 642 >UniRef50_A5D3Z6 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A5D3Z6_PELTS Length = 1114 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 143 PYSGLRGQRTSLIPHQLN-IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAE 201 P G+ + +PHQ+ + H + + R LLAD+ G GKTI AG++ + G Sbjct: 90 PLYGISVSQIHPLPHQIEAVYHHILKNPNIRFLLADDPGAGKTIMAGLLFKELKYRGLVS 149 Query: 202 RVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARR 261 RVLI+VP L+ QWL EM RF +F + D R N + +I SLDFA++ Sbjct: 150 RVLIVVPGHLKDQWLREMKERFGEKFLVVD--RSVMNASWGQNIWTENHQIITSLDFAKQ 207 Query: 262 SKQRLEHLCEAEWDLLVVDEAHHL----VWSEDAPSREYQAIEQLAEHVPGVLLLTATPE 317 + + L ++ WDL++VDEAH + + + + YQ E +++ +L LTATP Sbjct: 208 -EDIMFALKDSSWDLVIVDEAHKMSAYRYGDKISKTARYQFGELISQITKYLLFLTATPH 266 Query: 318 QLGMESHFARLRLLDPNRF 336 + E+ L LL P F Sbjct: 267 RGDPENFRLFLDLLQPGFF 285 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 3/105 (2%) Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSE 564 K+L+ T L + + ++ G H GM + R RA F AQV++ +E Sbjct: 483 KLLIFTESKDTLEYLAEKIGKKWGYSVTTVHGGMGMDARIRAEHEFKNR---AQVMVATE 539 Query: 565 IGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 EG N QF MV +D+P+NP+ LEQR+GR+ R GQ ++ I+ Sbjct: 540 AAGEGINLQFCWLMVNYDIPWNPNRLEQRMGRIHRYGQKSEVHIY 584 >UniRef50_A1T433 Helicase domain protein n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T433_MYCVP Length = 964 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 8/198 (4%) Query: 124 DRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVG-RRHAPRVLLADEVGLG 182 D+F L A + P + +PHQ+ +D H R LLAD+ G G Sbjct: 74 DQFWLAIEALRLRHAAVLNPLLAVSSSNVEALPHQVQAVYDCMLTGHPKRFLLADDPGAG 133 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTI AG+ + + L G R LI+VP +L QW E+ +F+L+F +F++ ++ ++ Sbjct: 134 KTIMAGLFIKEALARGWIRRCLIVVPGSLVEQWQNELREKFSLQFEVFENSLLGDSPDES 193 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLV---W-SEDAPSREYQA 298 F +I LD RS + + +DL + DEAH L W S ++ ++ Sbjct: 194 LQNF---PFLIARLDQFSRSSELTARAVDGAYDLAIFDEAHKLAVSSWGSTVTKTKRFKL 250 Query: 299 IEQLAEHVPGVLLLTATP 316 E + + VP LL+TATP Sbjct: 251 AEAIRDAVPSTLLMTATP 268 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 3/107 (2%) Query: 504 QKVLVICAKAATALQLEQVLREREG--IRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLL 561 +K+++ T LE L E G + V H MS +R RA A F E + + VL+ Sbjct: 492 RKIIIFSENRDTLDYLEDRLVELLGRTVDVQVIHGAMSWTDRRRAQANFIAEPS-SSVLI 550 Query: 562 CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 ++ EG N Q A MV +D+P+NP+ LEQR GR+ RIGQ H + Sbjct: 551 ATDAAGEGVNLQVAHLMVNYDVPWNPNRLEQRFGRIHRIGQRHTCHL 597 >UniRef50_UPI0001BC2D00 putative helicase n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2D00 Length = 1033 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 7/178 (3%) Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 PR+LLAD VGLGKTIE G+IL + + G +R+L++ P+ + Q EM +F + F Sbjct: 160 PRILLADAVGLGKTIEIGLILAELIKRGRGDRILVVTPKHVLEQMQHEMWTKFAIPFVRL 219 Query: 231 DD---ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 D +R + NPF + I S+D +S + L HL +WD +V+DE+H++ Sbjct: 220 DSQGIQRIRQKLPATRNPFTYFKRAIISID-TLKSDRYLSHLRRHKWDAVVIDESHNVT- 277 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEE 345 + S ++ + LA++ ++L +ATP ES +RLL+P EE Sbjct: 278 --NTSSLNHRLADTLAKNTDALILASATPHNGKKESFAELIRLLEPTAVKPDGNLDEE 333 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 6/109 (5%) Query: 505 KVLVICAKAAT--ALQ--LEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVL 560 + ++ + AT ALQ L Q L+ ++ + A+ H G+S +E+ F ++ + +VL Sbjct: 490 RAVIFAERVATLHALQADLTQDLKLKDD-QVAILHGGLSDVEQQDVVESFKKKSSPIRVL 548 Query: 561 LCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 + ++ SEG N H +V FD+P++ +EQR GR+DR GQ QI Sbjct: 549 VTGDLASEGVNLHSQCHELVHFDIPWSLIRIEQRNGRIDRYGQTQRPQI 597 >UniRef50_A1WLN0 Type III restriction enzyme, res subunit n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WLN0_VEREI Length = 814 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 3/135 (2%) Query: 155 IPHQLNIAHDVGRRHAP-RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 +PHQ+ ++ P R +LAD+ G GKTI AG+ + + L+ A RVLI+ P +L Sbjct: 110 LPHQITAVYESMLPRQPLRYVLADDPGAGKTIMAGLFIRELLMRADARRVLIVAPGSLVE 169 Query: 214 QWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAE 273 QW EM +F L F LF E+ ++ + NPFD L++ +D R++ E L + Sbjct: 170 QWQDEMFEKFGLSFTLFSREQIDRSR--SGNPFDDIDLLVARVDQLARAEDLQEKLMPTQ 227 Query: 274 WDLLVVDEAHHLVWS 288 WDL+VVDEAH L S Sbjct: 228 WDLVVVDEAHKLSAS 242 >UniRef50_A9GJG1 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A9GJG1_SORC5 Length = 1214 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 86/257 (33%), Positives = 123/257 (47%), Gaps = 30/257 (11%) Query: 117 AGQIDRMDRFALRYRARKYSS------EQFRMPY-SGLRGQRTSLIPHQLNIAHDVGRRH 169 A ++D F A K+S+ +F+ P+ +G++ L+ HQL Sbjct: 200 ASRLDPPAHFGAYLHALKWSAVSAADATRFQSPFRAGIK-----LMAHQLTPLMKALELP 254 Query: 170 APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFAL 229 + +AD+VGLGKTIEAG++L + LL A VL++ P ++ QW EM RRF LRF + Sbjct: 255 RANLFIADDVGLGKTIEAGLVLQELLLRQQASFVLVVCPASVCLQWQGEMQRRFGLRFEV 314 Query: 230 FDDE--RYAEAQHD-AYNPFDTEQLVICSLDFARRSKQR---LEHLCE-AEWDLLVVDEA 282 + Y +H NP+ T I S RRS+ R L HL E A LL++DEA Sbjct: 315 MTRQFVAYRRQEHGFGINPWSTHNRFIVSHALLRRSEYREPLLHHLGERARKGLLILDEA 374 Query: 283 HHLVWSEDAPSREY-------QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNR 335 H + A + +Y + I LA + L+ATP S A L +LDP R Sbjct: 375 H---VAAPASASKYATDTDITRTIRDLAPRFDNRMFLSATPHNGHSNSFSALLEILDPVR 431 Query: 336 FHDFAQFVEEQKNYRPV 352 F VE +K+ PV Sbjct: 432 FTRGVP-VEGKKDLDPV 447 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 534 FHEGMSIIERDRAAAWF--AEEDTGAQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLL 590 FH GM RD F A ++ ++L+ ++ EG N Q + + D+P+NP + Sbjct: 714 FHGGMGDDARDEVQRAFNSAPDEHPVRILVATDAAREGVNLQAHCADLFHIDIPWNPARM 773 Query: 591 EQRIGRLDRIGQ-AHDIQIH 609 EQR GR+DR Q A +++ H Sbjct: 774 EQRNGRIDRTLQPAPEVRCH 793 >UniRef50_Q5P8V3 ATP-dependent helicase n=4 Tax=Bacteria RepID=Q5P8V3_AZOSE Length = 980 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 5/198 (2%) Query: 153 SLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQ 212 +L+P+QL+ A ++ R+L+AD VGLGKT+EAG++ + + G +R+L++ +++ Sbjct: 104 NLVPYQLDPALQALKQPRQRILIADAVGLGKTLEAGILTTELIQRGRGDRILVVTLKSML 163 Query: 213 HQWLVEMLRRFNLRFALFDD---ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHL 269 Q+ E RF++ D +R +NPF+ I S+D + + + +L Sbjct: 164 TQFQKEFWSRFSIPLVRLDSVGLQRVRNTIPSNHNPFNYYDRSIISIDTLKGNLEYRNYL 223 Query: 270 CEAEWDLLVVDEAHHLV--WSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 A WD++++DE H++ SED SR + LA ++LL+ATP S + Sbjct: 224 ENAWWDIIIIDECHNVAARASEDGMSRRARLARMLAGRSDTMILLSATPHDGSARSFASL 283 Query: 328 LRLLDPNRFHDFAQFVEE 345 + LLDP D + E Sbjct: 284 MSLLDPTAISDPDDYTPE 301 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 15/124 (12%) Query: 503 SQKVLVICAKA-----ATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGA 557 S+++ +C A AT L+ Q+ + H GM+ E+ F ++ Sbjct: 456 SERIETLCWLAEHLPTATKLKPNQI---------EILHGGMTDTEQQSIVERFGRKEDPI 506 Query: 558 QVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKT 616 ++LLCS++ SEG N + H +V FDLP++ + +QR GR+DR GQ H QI + E Sbjct: 507 RLLLCSDVASEGLNLHYFCHRLVHFDLPWSLMVFQQRNGRVDRYGQTHQPQIIYLFTETR 566 Query: 617 AQSV 620 Q V Sbjct: 567 IQRV 570 >UniRef50_Q3MB27 Type III restriction enzyme, res subunit n=10 Tax=Bacteria RepID=Q3MB27_ANAVT Length = 1172 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 10/193 (5%) Query: 152 TSLI---PHQLNIAH-DVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIV 207 TSL+ PHQ+ + ++ R R LLAD+ G GKTI AG+++ + L+ G R L++ Sbjct: 101 TSLVEPLPHQITAVYGEMLTRQPLRFLLADDPGAGKTIMAGLLIRELLIRGDLHRCLVVC 160 Query: 208 PETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLE 267 P +L QW E+ ++F+LRF + ++R A + N F L+I LD R++ Sbjct: 161 PGSLAPQWQDELSQKFHLRFEILTNDRIESAV--SGNAFSEIPLLITRLDQLSRNQNLQA 218 Query: 268 HLCEAEWDLLVVDEAHHLVWS----EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMES 323 L + +WDL++ DEAH + S E ++ Y+ + L+ LL++ATP E Sbjct: 219 KLGQTDWDLVICDEAHKMSASFFGGEIQETKRYKLGKLLSSLTRHFLLMSATPHNGKEED 278 Query: 324 HFARLRLLDPNRF 336 + LLD +RF Sbjct: 279 FQLFIALLDGDRF 291 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Query: 533 VFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQ 592 H M ER +A F + D QVL+ ++ EG N Q A MV +DLP+NP+ LEQ Sbjct: 539 TIHGAMGREERRKAQDAFTQ-DIEVQVLIATDAAGEGINLQRAHLMVNYDLPWNPNRLEQ 597 Query: 593 RIGRLDRIGQA 603 R GR+ RIGQ Sbjct: 598 RFGRIHRIGQT 608 >UniRef50_C5DA36 Helicase domain protein n=4 Tax=Bacillaceae RepID=C5DA36_GEOSW Length = 1062 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 11/199 (5%) Query: 146 GLRGQRTSLIPHQLNIAHD-VGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVL 204 L Q +PHQ+ + + R + R LLAD+ G GKTI AGM++ + +A R+L Sbjct: 91 ALGNQHLIPLPHQIEAVYGRMLRVPSVRFLLADDPGAGKTIMAGMLIQELKARQSANRIL 150 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQ 264 I+VP + QW E+ +FN F + R ++ NPF VI SL +A R Sbjct: 151 ILVPPLVLKQWQQELKEKFNEDFLIVT--RSTLNEYSGKNPFVENDCVITSLYWAARDDV 208 Query: 265 RLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE-------YQAIEQLAEHVPGVLLLTATPE 317 R + + EA++DL++VDEAH + ++ YQ E + H LLLTATP Sbjct: 209 R-DLVIEADFDLVIVDEAHKMAAYTSGVKKKKTKRTKLYQLGEIILRHSDHCLLLTATPH 267 Query: 318 QLGMESHFARLRLLDPNRF 336 + +E+ +RL+DP+ F Sbjct: 268 KGDVENFRHLMRLIDPDIF 286 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 6/128 (4%) Query: 479 GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 G W + + + G L + +K+L+ T LE+ LR G+ A Sbjct: 462 GVERKWMELEKTLFGVEGLL--QKGEKILIFTESTDTLHYLEKKLRAH-GVEVAKIIGKF 518 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 S+ ER + F E ++L ++ G E N QF + M+ +D+P+NP+ LEQR+GR+ Sbjct: 519 SMEERRKQVERFKHE---CPIMLATDAGGESINLQFCNQMINYDIPWNPNKLEQRMGRIH 575 Query: 599 RIGQAHDI 606 RIGQ +++ Sbjct: 576 RIGQRNEV 583 >UniRef50_A1U084 Helicase domain protein n=2 Tax=Bacteria RepID=A1U084_MARAV Length = 982 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 94/174 (54%), Gaps = 8/174 (4%) Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 PR+LLAD+VGLGKTIE GMIL + + G +R+L++ +++ Q+ E+ RF L Sbjct: 115 PRLLLADQVGLGKTIEVGMILSELIRRGQGQRILVLAKKSMLTQFQAELWNRFALPLVRM 174 Query: 231 DDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 D + ++ Q + NPF+ +I S+D + + L WD++V+DEAH++ Sbjct: 175 DSDTLSKLQLKIPASKNPFEVYHRIIISIDTLKDIGRYAHFLENTRWDVVVIDEAHNVSG 234 Query: 288 SEDAPSR--EYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL-RLLDPNRFHD 338 + P R Y+ +L+ ++L TATP G F RL LLDP+ D Sbjct: 235 GTN-PERHLSYRLARRLSRRTNSMILTTATPHN-GKRETFGRLISLLDPSAVPD 286 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 13/123 (10%) Query: 495 MGYLTSHRSQKVLVICAKAATALQLEQVLREREGIR------------AAVFHEGMSIIE 542 MG+ S +S ++LV T L L + G A H GMS Sbjct: 428 MGWDGSSKSPRLLVFTESRVTQEYLAPALAKHFGQSFSPKQEKQPEQTIAAIHGGMSDNA 487 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIG 601 A F ++ +++L +++ SEG N H ++ +DLP++ L QR GR+DR G Sbjct: 488 LAAAVEAFGTGNSPVRLMLATDVASEGVNLHHQCHNIIHYDLPWSIITLIQRNGRIDRFG 547 Query: 602 QAH 604 Q + Sbjct: 548 QKY 550 >UniRef50_C3QQJ4 Helicase domain-containing protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QQJ4_9BACE Length = 1139 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 82/264 (31%), Positives = 123/264 (46%), Gaps = 19/264 (7%) Query: 81 LTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQF 140 L + G + S V E F S V + + F G D+ FA R S+ QF Sbjct: 31 LKFTGVNTNKSSSKVITEEQF-SSLEVLTSDGEFNFKGNPDKFVLFAEAERIN--SAYQF 87 Query: 141 RMPYSGLRGQRTSLIPHQLNIAHD-VGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGA 199 P + +PHQ+ + + + R LLAD+ G GKTI AG++L + L+ Sbjct: 88 D-PLFAINCSVVDPLPHQVEAVYKFLLPQPKIRFLLADDTGAGKTIMAGLLLKELLMRKI 146 Query: 200 AERVLIIVPETLQHQWLV-EMLRRFNLRFALFDDERYAEAQHDAYNP--FDTEQLVICSL 256 ER+LII P L QW EM +FN+ F L + + +P F + V+ S+ Sbjct: 147 IERILIITPGGLTKQWQEDEMGVKFNIPFTLVNRSIFNA------DPTIFRSANKVVASI 200 Query: 257 DFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSE----DAPSREYQAIEQLAEHVPGVLLL 312 DF R + L + WD+++ DEAH L E S+ Y+A L++ +LLL Sbjct: 201 DFICR-EDVLNIVSNTNWDMVIFDEAHKLSAYEYGQKTYKSKRYEAAHLLSQQCEHILLL 259 Query: 313 TATPEQLGMESHFARLRLLDPNRF 336 TATP + ++ L+LLD + F Sbjct: 260 TATPHRGRTDTFKKLLQLLDEDIF 283 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 7/90 (7%) Query: 523 LRER---EGIRAAVFHEGMSIIERDRAAAW-FAEEDTGAQVLLCSEIGSEGRNFQFASHM 578 LRER G + AV H G+S+ ER R A W F +T Q+L+ ++ EG N QF + Sbjct: 515 LRERLSNNGYKVAVIHGGLSVDER-RQAQWDFMSPET--QILIATDAAGEGINLQFCRLL 571 Query: 579 VMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 + +D+P+NP+ LEQR+GR+ R GQ +D+ + Sbjct: 572 INWDIPWNPNRLEQRMGRIHRYGQKNDVLV 601 >UniRef50_Q06GB3 Putative helicase n=1 Tax=Rhodococcus sp. NS1 RepID=Q06GB3_9NOCA Length = 1102 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 98/377 (25%), Positives = 165/377 (43%), Gaps = 40/377 (10%) Query: 141 RMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAA 200 R Y G+ + +PHQ + V R + L ADEVGLGKT+EAG++L + LSG A Sbjct: 307 RSAYVGVGTAQVEPLPHQAMLIDRVVRTYPRGYLFADEVGLGKTVEAGLVLRELFLSGRA 366 Query: 201 ERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD-------AYNPFDTEQLVI 253 L++VP ++ QW E+ + NL +D + + +HD NP+ +V+ Sbjct: 367 RTALLLVPASVMRQWQEELHEKMNLDVPRYDKGEFVD-RHDQPIPVAPGTNPWSAFPIVL 425 Query: 254 CSLDFARRSKQRLEHLCEAEWDLLVVDEAHHL----VWSEDAPSREYQAIEQLAEH--VP 307 S ARR +R + L WD+++VDEAHH D P+ + ++ E Sbjct: 426 ASSHLARRRDRRRDILAAGPWDVVLVDEAHHARRRGAKPTDTPNSLLALLLEMREKQMWK 485 Query: 308 GVLLLTATPEQLGMESHFARLRLLD-----PNRFHDFAQFVE------EQKNYRPVADAV 356 + L +ATP Q+ + + LL H+F ++ E + +N++ + + Sbjct: 486 ALYLASATPMQMNPHEAWDLISLLGLTGRWAESAHNFLEYFERLRVSAQVRNWKLLCTML 545 Query: 357 AMLLAGNKLSNDEL--NMLGEMIGEQDIEPLLQAA-NSDSEDAQSARQELVSMLMD---- 409 A D + E +G D + A N S +A++ S MD Sbjct: 546 NDYFADPAAERDTRLEAQVDEALGFVDAYAVTALADNPPSSEARAQMPNETSEWMDRWLR 605 Query: 410 RHGTSR-VLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDML 468 RH R +FRNTR+ ++ + + + +P ++ V + AE R D + Sbjct: 606 RHTPMRDRVFRNTRSTLRKYQNAGIIAEDVIIPYRH-----VDDVFIELAPAERRLYDRI 660 Query: 469 --YPERIYQEFEGDNAT 483 Y R Y ++ D ++ Sbjct: 661 EQYIRRHYNAYKSDQSS 677 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 8/138 (5%) Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD-IQIHVPYLEKTA 617 VL+ ++ SEG N Q ++ +D+P+N +EQRIGR+DRIG +++ IQ+ + T Sbjct: 847 VLIGTDSMSEGLNLQTCGRLINYDMPWNLMRVEQRIGRVDRIGASYEHIQVTNYFYADTV 906 Query: 618 QSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEAL 677 + + E F + ++ I LA D G D+ + + Q +AL Sbjct: 907 EQRVYEGIAEDYGDFTDIVGDAAPVLGNI-EKAIEQLALGD---GSDEAVAD---QVDAL 959 Query: 678 KAQLEQGRDRLLEIHSNG 695 K ++EQ R +++ G Sbjct: 960 KGEVEQLHTRAVQVTDLG 977 >UniRef50_Q18F85 ATP-dependent helicase HepA n=3 Tax=Halobacteriaceae RepID=Q18F85_HALWD Length = 959 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 20/198 (10%) Query: 150 QRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIV 207 QR+ +IP + + V +PRV LLAD+VGLGKTIEAG+I + + A+RVL+I Sbjct: 95 QRSRVIPTEYQLTPVVMALDSPRVRMLLADDVGLGKTIEAGLITSELMSRNKADRVLVIT 154 Query: 208 PETLQHQWLVEMLRRFNLRFALFDD---ERYAEAQHD----AYNPFDTEQLVICSLDFAR 260 P L+ QW FN F + D R+ +A +P+ +I S+D+A+ Sbjct: 155 PANLRDQW----REAFNHFFHIESDIISRRHRKAMEKQIPPGTSPWAHFSKLIVSIDYAK 210 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE------QLAEHVPGVLLLTA 314 + R E L E +WDL+++DEAH ++ + E ++ ++ +H LLLTA Sbjct: 211 QDSVRHEILDE-DWDLVIIDEAHKAAKPHESGANESVNMQRWDFATEITDHAEHCLLLTA 269 Query: 315 TPEQLGMESHFARLRLLD 332 TP +S + LR+LD Sbjct: 270 TPHNGYTDSFASLLRMLD 287 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 3/121 (2%) Query: 488 DPRVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDR 545 D +++ L+ R Q +V++ T L+ + E +G R VF S+ E R Sbjct: 486 DAKLQRLLDETLPQRFQYSRVIIFTKYVDTLEYLKDQIEESQGERTDVFTLHGSLNEAQR 545 Query: 546 AAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVM-FDLPFNPDLLEQRIGRLDRIGQAH 604 + E + VL+ +++ SEG N Q A++ ++ ++LP+NP+ LEQR GR+DR GQ Sbjct: 546 KERFNEFEGSDRAVLIATDVISEGMNLQHAANQIIHYELPWNPNRLEQRNGRIDRYGQEE 605 Query: 605 D 605 D Sbjct: 606 D 606 >UniRef50_C9RHU2 Helicase domain protein n=1 Tax=Methanocaldococcus vulcanius M7 RepID=C9RHU2_METVM Length = 994 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 105/186 (56%), Gaps = 9/186 (4%) Query: 157 HQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWL 216 HQ+++ ++ R L+ADE+GLGKTIE+ I L +++L++ P+ L+ QW Sbjct: 39 HQIHLLYNAMLLRPVRFLIADEIGLGKTIESLAIARYLELKEGIKKILVLTPKILREQWE 98 Query: 217 VEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL 276 E+ R + + D + + +D+ ++I S+D A+R ++ + + +WDL Sbjct: 99 AEIKRVGGIPRIIKDGNDINNIK-SSLQYYDSVYIII-SIDLAKRY---VDKILQIDWDL 153 Query: 277 LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 ++VDEAH++ + ++ + +E+L++ V +LLL+ATP + + + RL+LLDP Sbjct: 154 VIVDEAHNITKN----TQRGKLVEKLSKKVRNMLLLSATPHRGDPQDYLYRLKLLDPTLI 209 Query: 337 HDFAQF 342 DF + Sbjct: 210 DDFDKL 215 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 5/104 (4%) Query: 553 EDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPY 612 ED G ++LL +++ SEG N Q AS ++ +D P++P LEQRIGR+ R+GQ D+ ++ + Sbjct: 457 EDCG-KILLATDVASEGLNLQIASVLINYDSPWSPIKLEQRIGRVWRLGQEKDVSVYNIF 515 Query: 613 LEKTAQSVLVRWYHEGL----DAFEHTCPTGRTIYDSVYNDLIN 652 L L+ ++ + +A ++ G+ IY + +L N Sbjct: 516 LSNRMDLELLNNLYKKIMNIKNALDNQLAIGKEIYIANAENLFN 559 >UniRef50_Q5P890 Helicase (Snf2 family) n=10 Tax=Bacteria RepID=Q5P890_AZOSE Length = 965 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 115/227 (50%), Gaps = 12/227 (5%) Query: 126 FALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIA-HDVGRRHAPRVLLADEVGLGKT 184 +A R +SE+ R+ S L L PHQ++ A + + V+LADEVGLGKT Sbjct: 15 YAWELTRRHAASEEGRLSQS-LFDASVDLNPHQIDAALFALENPLSKGVMLADEVGLGKT 73 Query: 185 IEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA-Y 243 IEA +++ QL + R+L+I P L+ QW E+ +FN+ + D + + + Y Sbjct: 74 IEAALVMC-QLWAERRRRLLVICPAALRKQWAQELSDKFNVPAQVLDARTWLRLRQEGIY 132 Query: 244 NPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLA 303 P D + + I SL+FA R + L WDL+V+DEAH L +A + ++ + L Sbjct: 133 EPLDRDVISIMSLNFAARME---AQLGSVPWDLVVIDEAHKL---RNAHRKSHETGQSLK 186 Query: 304 EHVPG--VLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 + G LLLTATP Q + + L+D + F D F + N Sbjct: 187 RSLAGRRKLLLTATPLQNSLLELYGLSSLIDEDIFGDERSFRAQYGN 233 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/52 (48%), Positives = 36/52 (69%) Query: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 A++L+ +E +EG N QF S +V +DLP+NP +EQRIGR R GQ D+ + Sbjct: 506 AEILIATEAAAEGVNLQFCSLVVNYDLPWNPQRVEQRIGRCHRYGQRFDVVV 557 >UniRef50_Q07U65 SNF2-related protein n=2 Tax=Rhodopseudomonas palustris RepID=Q07U65_RHOP5 Length = 963 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 110/206 (53%), Gaps = 21/206 (10%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRHAP---RVLLADEVGLGKTIEAGMILHQQLLSGAAER- 202 L R + PHQ+ A H+P V+LADEVGLGKTIEA +++ Q+ AER Sbjct: 30 LSTARVDMKPHQVEAARFA--LHSPLSKGVILADEVGLGKTIEACLVIAQKW----AERR 83 Query: 203 --VLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAY-NPFDT-EQLVICSLDF 258 VL+IVP +L+ QW E+ ++F+L + D + + +A+ +PFD +VI S + Sbjct: 84 RHVLLIVPASLRTQWQQELQQKFSLPSVILDSKTHRDAEKSGQPHPFDNPAAIVITSYQY 143 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHL--VWSEDAPSREYQAIEQLAEHVPGVLLLTATP 316 A R L + WDL+V+DEAH L V+ + ++ + + LA ++LTATP Sbjct: 144 AARKHDELHRIA---WDLVVIDEAHRLRNVYKKRQSAQAKKLRDVLASRFK--IMLTATP 198 Query: 317 EQLGMESHFARLRLLDPNRFHDFAQF 342 Q + + + ++D + F D F Sbjct: 199 LQNSLMELYGLVSVIDDSFFGDEQSF 224 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 25/50 (50%), Positives = 35/50 (70%) Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 +L+ +E G+EG N QF S ++ FDLP+NP +EQRIGR R GQ D+ + Sbjct: 513 ILIATESGAEGINLQFCSLLINFDLPWNPQRVEQRIGRCHRYGQKIDVTV 562 >UniRef50_Q8NSD7 Superfamily II DNA/RNA helicases, SNF2 family n=1 Tax=Corynebacterium glutamicum RepID=Q8NSD7_CORGL Length = 962 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 87/167 (52%), Gaps = 7/167 (4%) Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 PRVL+AD VGLGKT+E GMIL + + G ER+L++ P + Q+ EM RF + Sbjct: 134 PRVLIADAVGLGKTLEMGMILAELIRRGRGERILVVTPRHIMEQFQQEMWTRFAIPLVRL 193 Query: 231 DDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 D + + + NPF VI S+D + K R + L + WD +V+DE H+ Sbjct: 194 DSVGIQQVRQKLPASRNPFTYFPRVIVSMDTLKSPKYRAQ-LEKVHWDAVVIDEIHN--- 249 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN 334 + +A ++ + LA ++L +ATP ES LRLLDP Sbjct: 250 ATNAGTQNNELARTLAPTAEALILASATPHNGDPESFKEILRLLDPT 296 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLL 590 AV H G+ E+ R F + D+ ++++ ++ SEG N H +V +D+P++ + Sbjct: 475 AVMHGGLPDQEQMRLVDEFKKTDSPIRIMITGDVASEGVNLHTLCHNLVHYDIPWSLIRI 534 Query: 591 EQRIGRLDRIGQAHDIQI 608 +QR GR+DR GQ H+ I Sbjct: 535 QQRNGRIDRYGQTHNPSI 552 >UniRef50_Q4UZA6 Helicase n=9 Tax=Proteobacteria RepID=Q4UZA6_XANC8 Length = 967 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 71/178 (39%), Positives = 98/178 (55%), Gaps = 10/178 (5%) Query: 146 GLRGQRTSLIPHQLNIA-HDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVL 204 L R + PHQ++ A + VLLADEVGLGKTIEAG++L Q + R+L Sbjct: 48 ALSAARVDMNPHQVDAALFALKSPVEAGVLLADEVGLGKTIEAGLVLAQH-WAQRRRRLL 106 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERY-AEAQHDAYNPFDTEQ-LVICSLDFARRS 262 +IVP TL+ QW E+ +F L + + + + A Q D NPF E +++ S +FA S Sbjct: 107 LIVPATLRKQWTQELEEKFQLPSVILESKSFNAFRQLDVSNPFQIEDAIIVTSYEFA-AS 165 Query: 263 KQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPG--VLLLTATPEQ 318 KQ+ L WDL+V+DEAH L S +A+ L E + G +LLTATP Q Sbjct: 166 KQK--ELAAVSWDLVVLDEAHKLRNLYKGKSASKRAV-ALNEALRGRRKVLLTATPFQ 220 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/50 (52%), Positives = 35/50 (70%) Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 VL+ +E G EG N QF S +V +DLP+NP +EQRIGR+ R GQ D+ + Sbjct: 525 VLITTEAGGEGINLQFCSLLVNYDLPWNPQRVEQRIGRIHRYGQKSDVVV 574 >UniRef50_A7VHM1 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A7VHM1_9CLOT Length = 862 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 11/204 (5%) Query: 143 PYSGLRGQRTSLIPHQLN-IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAE 201 PYS L + PHQ+ + +LADEVGLGKTIEAG+++ L SG Sbjct: 20 PYSCLHMADIDINPHQVEAFTFALSSLKLGGAILADEVGLGKTIEAGLVIKYLLCSG-KN 78 Query: 202 RVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQ-LVICSLDFAR 260 ++L+I+P L+ QW VE+ +F++ + D + D ++Q ++I S FA Sbjct: 79 KILLIMPSNLRKQWQVELEEKFDIDSLIVDSSNW----EDYLAKVKSKQAVIIASYHFAS 134 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG 320 + K + WD V DEAH L S+ ++ +L + +P + LLTATP Q Sbjct: 135 KRKAEFGKIA---WDFCVFDEAHRLRNVYKNGSKMANSLYELTKGIPKI-LLTATPMQNT 190 Query: 321 MESHFARLRLLDPNRFHDFAQFVE 344 + + ++ +D F+ F E Sbjct: 191 LLDIYGLVQFIDDRVFYSKQIFSE 214 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 37/51 (72%) Query: 558 QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 ++LL ++ GSEG N QF + ++ +DLP+NP +EQRIGR R GQ +D+ + Sbjct: 485 KILLVTDSGSEGLNLQFCNTIINYDLPWNPQKIEQRIGRCHRYGQKNDVVV 535 >UniRef50_Q9V0B0 Putative DEAH ATP-dependent helicase n=1 Tax=Pyrococcus abyssi RepID=Q9V0B0_PYRAB Length = 973 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 14/196 (7%) Query: 157 HQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWL 216 HQL + + R+ +ADE+GLGKTI+A I L G A+R+LI+VP+ L+ QW Sbjct: 36 HQLQPLYHAMIQRPVRMFIADEIGLGKTIQALAIARYLNLKGEAKRILILVPKILREQWR 95 Query: 217 VEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL 276 E+ R + + E AE + E I S+D A+ + R + E EWDL Sbjct: 96 EEVERLGIIPIVI---ESGAEVESKLRR---KEGFFIVSIDLAKMPEHR-DKFLEKEWDL 148 Query: 277 LVVDEAHHLVWSEDAPSREYQAIEQLAEHVP--GVLLLTATPEQLGMESHFARLRLLDPN 334 +++DEAH++ ++ Y+ ++ L V+ L+ATP + + + ARL LLDP Sbjct: 149 VIIDEAHNVTLG----TQRYEFVKDLVGKNKDLNVIFLSATPHRGDPKDYLARLTLLDPT 204 Query: 335 RFHDFAQFVEEQKNYR 350 D+++ + Q+ YR Sbjct: 205 LIDDYSKL-DSQEFYR 219 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 6/116 (5%) Query: 502 RSQKVLVICAKAATALQLEQVLREREGIR---AAVFHEGMSIIERDRAAAWFAEEDTGAQ 558 R +KV++ T L + L G+ ++ H GM + + F + + Sbjct: 397 RGEKVIIFTEFKDTLEYLRKNLPSLAGLSDEDVSILHGGMPSGKVEEEIRKF---EKHGK 453 Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLE 614 +L+ +++ SEG N Q A+ ++ ++ P+ P LEQR+GR+ RI Q D++ + +L+ Sbjct: 454 LLISTDVASEGLNLQVANVLINYEAPWTPIKLEQRVGRVWRINQKRDVKAYTIFLD 509 >UniRef50_A3PUQ9 Helicase domain protein n=4 Tax=Actinomycetales RepID=A3PUQ9_MYCSJ Length = 1136 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 79/249 (31%), Positives = 120/249 (48%), Gaps = 19/249 (7%) Query: 102 LDSKLVFSKPQDRLFAGQIDR--MDRFALRYRARKYSSEQFRMPYSGLRGQRTSL----- 154 L ++VF K QD L Q D A + K +E R+ +GL ++ Sbjct: 45 LGQQVVFRKDQDSLTVAQTGSRAFDANATDF---KMVAEAQRITLAGLFDPMLAVATSDV 101 Query: 155 --IPHQLNIAH-DVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 +PHQ+ + ++ R R LLAD+ G GKTI AG+ + + LL + LI+ P L Sbjct: 102 RPLPHQIRAVYGELLPRTPLRFLLADDPGAGKTIMAGLYIKELLLRDDVRQCLIVAPGGL 161 Query: 212 QHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCE 271 QW E+ +F LRF L ++ +A + N F+T L+I +D R+++ L + Sbjct: 162 VEQWQDELFFKFGLRFDLLTNQ-LIDANVN-LNVFETHPLLIARMDQLSRNEELQAQLKD 219 Query: 272 AEWDLLVVDEAH----HLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 EWDL++VDEAH H + ++ + E L +LL+TATP E Sbjct: 220 TEWDLIIVDEAHRMGAHYFGGKLEKTKRFLLGELLGRITRHLLLMTATPHSGKEEDFQLF 279 Query: 328 LRLLDPNRF 336 L LLD +RF Sbjct: 280 LTLLDRDRF 288 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/46 (52%), Positives = 32/46 (69%) Query: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 Q+LL ++ EG N Q A MV +DLP+NP+ +EQR GR+ RIGQ Sbjct: 548 CQILLATDAAGEGLNLQAAHLMVNYDLPWNPNRIEQRFGRIHRIGQ 593 >UniRef50_Q2LYC9 Superfamily II DNA/RNA helicase, SNF2 family n=13 Tax=cellular organisms RepID=Q2LYC9_SYNAS Length = 1193 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 155 IPHQLNIAHDVGRRHAP-RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 +PHQ+ ++ P R LLAD+ G GKTI AG+ + + + G +R LI+ P L Sbjct: 106 LPHQITAVYEAMLPRQPLRFLLADDPGAGKTIMAGLFIKELIARGDLQRCLIVCPGNLAE 165 Query: 214 QWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSK--QRLEHLCE 271 QW E+ RRF+L F + +++ E+ H N F LVI LD R++ QR + Sbjct: 166 QWQDELYRRFHLPFEILTNDKL-ESAHTG-NWFLETNLVIARLDKLSRNEDVQRKLQTPD 223 Query: 272 AEWDLLVVDEAHHLVWS----EDAPSREY---QAIEQLAEHVPGVLLLTATPEQLGMESH 324 WDL+V DEAH + + E ++ Y Q + LA H LL+TATP G E+ Sbjct: 224 CRWDLVVCDEAHKMSATVFGGETKYTKRYRLGQLLSTLARH---FLLMTATPHN-GKETD 279 Query: 325 FAR-LRLLDPNRF 336 F + LLD +RF Sbjct: 280 FQLFMALLDGDRF 292 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 10/122 (8%) Query: 488 DPRVEWLMGYL---TSHRSQKVLVICAKAAT----ALQLEQVLREREGIRAAVFHEGMSI 540 DP + + G + T QK+++ T A ++ +L +E + H GM Sbjct: 512 DPTLPYGAGAIPKPTPSPHQKLVIFTEHRDTLNYLATRITTLLGRKEAV--MTIHGGMGR 569 Query: 541 IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI 600 +R +A F + D QVLL ++ EG N Q A MV +DLP+NP+ +EQR GR+ RI Sbjct: 570 EDRMKAQEAF-KHDPEVQVLLATDAAGEGINLQRAHLMVNYDLPWNPNRIEQRFGRIHRI 628 Query: 601 GQ 602 GQ Sbjct: 629 GQ 630 >UniRef50_C3MNX6 Helicase domain protein n=2 Tax=Sulfolobus islandicus RepID=C3MNX6_SULIL Length = 895 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 103/216 (47%), Gaps = 16/216 (7%) Query: 123 MDRFALRYRAR-KYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 M F L Y + K FR P L G HQ + + + R R L+AD+VGL Sbjct: 1 MSEFILYYLDKLKEYHPMFRYPL--LTGGDYEPYIHQAEMFYRLLSRDPVRFLIADDVGL 58 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRF--NLRFALFDDERYAEAQ 239 GKTIE MI+ Q + +R+L+IVP+ L +QW+ E LR+F + + D Y EA Sbjct: 59 GKTIEGIMIMDQLIKDRGVKRILLIVPKVLINQWISE-LRKFAKEWQLPIIDYRNYREA- 116 Query: 240 HDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAI 299 + I S+D +R++ + + L WDL+VVDE H + ++ Y + Sbjct: 117 ------LSENGIYIVSVDTIKRNEHKSKFLS-VNWDLIVVDEIHKVGIIGSKENQRYTIL 169 Query: 300 EQLAEHVPG--VLLLTATPEQLGMESHFARLRLLDP 333 L P + L+ATP + + RL L+DP Sbjct: 170 ASLVNKNPNSHFIGLSATPHRGNDNDYIKRLVLIDP 205 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 22/174 (12%) Query: 486 NFDPRVEWLMGYLTSH--RSQKVLV----------ICAKAATALQLEQVLREREGIRAAV 533 N D RV+ L+ + +H + KV++ I K AL L RE + + + Sbjct: 377 NSDSRVKALINLVGTHLNKGDKVIIFTEYKDTANYILGKLKDALNLTD--REIKVVTSVT 434 Query: 534 FH-EGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQ 592 + EG+ DR W E ++VL+ +++ SEG N Q A+ ++ +++P + EQ Sbjct: 435 INQEGI-----DRIKGWL--ESKESKVLIATDVASEGLNLQSANVIIHYEIPLSIVRFEQ 487 Query: 593 RIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSV 646 R GR+ R+ Q + I+ L+ + L+ Y+ L + + + D++ Sbjct: 488 RNGRVWRLKQTKPVYIYYISLKIPLEQALLENYYNKLLSITKGTGSNEKVVDAL 541 >UniRef50_B9XSE7 SNF2-related protein n=1 Tax=bacterium Ellin514 RepID=B9XSE7_9BACT Length = 819 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 78/238 (32%), Positives = 120/238 (50%), Gaps = 23/238 (9%) Query: 123 MDRFALRYRARKY-----SSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLAD 177 +DRF LR RA + S + +P+ R + +QL A V R LL+D Sbjct: 277 LDRFFLRERAALWWVSNQSDDLLCLPHC-----RIERLEYQLRTALRVLGPLRGRALLSD 331 Query: 178 EVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAE 237 EVGLGKTIEAG+IL + L G +R L++ +L QW E+ +F L + Sbjct: 332 EVGLGKTIEAGLILKELLTRGMVKRFLVLTVPSLVDQWEEELADKFGLATVTSNQ---TS 388 Query: 238 AQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQ 297 A+++ N + ++ SL ++ LE + WD+LVVDEAH+L + S+ +Q Sbjct: 389 ARNEPQNFWRENPGIVASLHTLKQPAH-LEIARQVSWDILVVDEAHYL---RNRESQAWQ 444 Query: 298 AIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF---HDF-AQFVEEQKNYRP 351 A+ L +LLLTATP Q +E + + LL P + +F A+FV ++ +P Sbjct: 445 AVNALPRQF--LLLLTATPVQNSLEELYNLVTLLQPGQLPSPKEFRARFVNPKRPRQP 500 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/75 (45%), Positives = 45/75 (60%) Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ 618 LL + G+EGRN QF+ +V FDLP+NP +EQRIGRL R+GQ + I+ T Q Sbjct: 675 ALLLTHSGTEGRNLQFSHRLVNFDLPWNPMEIEQRIGRLHRLGQQRPVHIYNLVYAGTLQ 734 Query: 619 SVLVRWYHEGLDAFE 633 L+ E L+ FE Sbjct: 735 EQLLEILQEKLNLFE 749 >UniRef50_A8M878 Helicase domain protein n=2 Tax=Actinomycetales RepID=A8M878_SALAI Length = 956 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/167 (35%), Positives = 90/167 (53%), Gaps = 7/167 (4%) Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 PR+LLAD VGLGKT+E GMIL + + G ER+LI+ P + Q E+ RF L F Sbjct: 132 PRILLADAVGLGKTLEIGMILSELVRRGRGERILIVTPRHVLEQTQQELWSRFALPFVRL 191 Query: 231 DD---ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 D +R + NPF + I S+D +S++ L + WD +V+DE+H+L Sbjct: 192 DSAGIQRVRQKLPANRNPFTYFRRAIISID-TLKSERYAASLKKQRWDAVVIDESHNLA- 249 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN 334 +A ++ + LA + ++L +ATP ES +RLLDP+ Sbjct: 250 --NAATQNNRLARTLARNTETMILASATPHNGRKESFAELVRLLDPS 294 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 4/115 (3%) Query: 498 LTSHRSQKVLVICAKAATALQLEQVLREREGIRA---AVFHEGMSIIERDRAAAWFAEED 554 + S + +V + AT L + L G+ A A+ H G+ E+ + F +E Sbjct: 444 VASGSPTRTVVFAERVATLTWLHKNLPADLGLPAGAVAIMHGGLPDDEQQQIVDAFKQEH 503 Query: 555 TGAQVLLCSEIGSEGRNFQF-ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 +VL+ ++ SEG N H++ +D+P++ +EQR GR+DR Q +I Sbjct: 504 AAIRVLVTGDVASEGVNLHAQCHHLIHYDIPWSLIRIEQRNGRIDRYRQRQPPRI 558 >UniRef50_Q3ZWH9 Putative helicase (Snf2 family) n=1 Tax=Dehalococcoides sp. CBDB1 RepID=Q3ZWH9_DEHSC Length = 1033 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 102/216 (47%), Gaps = 23/216 (10%) Query: 146 GLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLI 205 L R IP+Q R PR+L+AD VG+GKTIEAG+IL + + VLI Sbjct: 99 SLNSARIDFIPYQFRPVFKFIRSDRPRLLIADGVGVGKTIEAGLILQELQARRDIQSVLI 158 Query: 206 IVPETL--QHQWLVEMLRRFNLRFALFDDE--RYAEAQHD--------------AYNPFD 247 I P L + +W +EM RRF F + RY + D +Y+ FD Sbjct: 159 ICPRPLVMERKWQIEM-RRFGEHFTHLEGSTLRYCINEMDLEGIWPEQYKKSIISYSLFD 217 Query: 248 TEQLVICSLDFARRSKQRLEHL-CEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHV 306 L + R+ ++ L L +DL++VDEAHH+ +E + ++A+ ++ Sbjct: 218 EMLLFGPNGGNNRKRRKSLLTLDPPPRFDLVIVDEAHHIRNTE---TYAHKAVRYFCDNA 274 Query: 307 PGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQF 342 VL LTATP QLG F L +L P+ D F Sbjct: 275 EAVLFLTATPIQLGSNDLFVLLNVLRPDLIIDQKSF 310 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 7/126 (5%) Query: 486 NFDPRVEWLMGYLTSHRS---QKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 FDP++E L + + K+++ + T + + L EG R + H G E Sbjct: 515 TFDPKLEALKKVIRDKLTLPNNKIMLFSSFRHTLAYIYKNLIA-EGYRVGLVHGGTPDEE 573 Query: 543 RDRAAAWF---AEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDR 599 R+ F +++ VLL SEIG EG ++QF M+ +DLP+NP +EQRIGR+DR Sbjct: 574 RENIRDRFQLTGQDEKVIDVLLFSEIGCEGLDYQFCDCMINYDLPWNPMRIEQRIGRIDR 633 Query: 600 IGQAHD 605 GQ + Sbjct: 634 NGQKSE 639 >UniRef50_C7MQ57 DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MQ57_SACVD Length = 960 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 6/189 (3%) Query: 157 HQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWL 216 +QL A+ PR+L+ D VGLGKT+E G++L + + G +R+L++ P + Q+ Sbjct: 138 YQLRPAYQALSNLRPRILIGDAVGLGKTLEIGILLTELIKRGRGDRILVVTPRAVLEQFQ 197 Query: 217 VEMLRRFNLRFALFDDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAE 273 EM R+++ D + + + NPF + VI S+D + + HL Sbjct: 198 REMWTRYSIPLVRLDSDGIQKVRQTLPATRNPFSYYKRVIVSIDTLKNPARYRHHLSGHR 257 Query: 274 WDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDP 333 WD++V+DE H+L+ + ++ + LA ++L +ATP ES + LLDP Sbjct: 258 WDVVVIDECHNLI---NKGTQNNELARLLARQTDALILASATPHNGKRESFAELIGLLDP 314 Query: 334 NRFHDFAQF 342 D + Sbjct: 315 AAIADPKDY 323 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%) Query: 550 FAEEDTGAQVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 FA E + ++LL S++ SEG N H +V +DLP++ ++QR GR+DR Q H+ +I Sbjct: 520 FALEASPLRILLASDMASEGLNLHRQCHQLVHYDLPWSFIRIQQRNGRIDRYLQEHEPRI 579 >UniRef50_UPI0001B50036 helicase domain protein n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=UPI0001B50036 Length = 1109 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 98/209 (46%), Gaps = 27/209 (12%) Query: 154 LIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 + PHQ+ A V R LLADEVGLGKT++AG I Q L+ RV+++ P L Sbjct: 161 IYPHQIQAALTVLSDPVQRYLLADEVGLGKTVQAGYIFRQTLIDNPRARVVVLAPAPLVR 220 Query: 214 QWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAE 273 QW EML +F + F + R HD + + T + + Sbjct: 221 QWRSEMLEKFFIDD--FPEARITFTAHDTPDKWATYR----------------------D 256 Query: 274 WDLLVVDEAHHLVWSEDAPSRE-YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLD 332 DLL+VDEAH LV + P++ Y+ + +A +LLL+ATP +H L LLD Sbjct: 257 ADLLIVDEAHLLVQTITEPTQSPYRELCGIAHSATRLLLLSATPVTSHYVTHLGLLHLLD 316 Query: 333 PN--RFHDFAQFVEEQKNYRPVADAVAML 359 + R+ D A F E + + AD L Sbjct: 317 KHLYRWDDRAAFEERYRRRKDFADGAFQL 345 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 12/146 (8%) Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHE---GMSIIERDRAAAWFAEEDTGAQVLL 561 + ++ C + A Q+ LRE+ H G E+ A A + T +Q+L+ Sbjct: 577 RAVIFCGPGSLAGQVADALREQAPAAVVGLHTLDVGSDACEQAVLAWRTAGDTTKSQILV 636 Query: 562 CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLE------- 614 +G N Q A +V LP++P+ LEQRIGR+DR ++ + P + Sbjct: 637 VDASAEDGLNLQLADTVVHVRLPWSPNRLEQRIGRVDRYRGVESLRQNRPAQQFRVGDRE 696 Query: 615 --KTAQSVLVRWYHEGLDAFEHTCPT 638 + R HEG D F + T Sbjct: 697 GDEAFCGAWARVLHEGYDLFTASAST 722 >UniRef50_B1L8A6 Helicase domain protein n=4 Tax=Thermotoga RepID=B1L8A6_THESQ Length = 1013 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 16/233 (6%) Query: 144 YSGLRG----QRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGA 199 YS L +R HQ R+L+ADE+GLGKTI+A I L G Sbjct: 21 YSSLTSPSNRRRIEAFKHQFQTLCHAMLSRPVRILIADEIGLGKTIQALAIARYLELQGE 80 Query: 200 AERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDT-EQLVICSLDF 258 A+++LI+VP+ L+ QW E +RR + + + E + F+ + + S+D Sbjct: 81 AKKILILVPKILREQWKQE-IRRLGGKPVVITNGSEVERKLLRKATFNNAAEYFVVSIDL 139 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVP---GVLLLTAT 315 A +S+ E +WDLL+VDE H++ ++ ++ Y ++ L E ++ L+AT Sbjct: 140 A-KSQNHSEKFSAIDWDLLIVDEVHNVTYN----TQRYNFLKSLIEKSKEDLNIVFLSAT 194 Query: 316 PEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSND 368 P + + + RLRLLDP D+ ++ +K YR V + K+ ND Sbjct: 195 PHRGNPKDYIERLRLLDPTLTADWNA-LDSEKFYRR-THGVLVFRRTKKVVND 245 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 14/129 (10%) Query: 488 DPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQ---VLREREGIR------AAVFHE 536 D +++ L L H +++KV+V T L L E+EGI +V H Sbjct: 393 DSKLKTLAEVLAYHLKKNEKVIVFTEFKDTLEYLRNNLPTLLEQEGIHLSEEKDISVLHG 452 Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 GM E ++ FA + ++L+ +++ SEG N Q A+ ++ +++P++P LEQR+GR Sbjct: 453 GMKSEEIEKQVEKFAND---GKLLISTDVASEGLNLQVANILINYEIPWSPIKLEQRVGR 509 Query: 597 LDRIGQAHD 605 + R+ Q + Sbjct: 510 IWRLNQTKE 518 >UniRef50_C5A7B3 Type III restriction endonuclease, res subunit n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A7B3_THEGJ Length = 1100 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 71/232 (30%), Positives = 116/232 (50%), Gaps = 11/232 (4%) Query: 127 ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHD-VGRRHAPRVLLADEVGLGKTI 185 AL +Y P + + + +P Q++ ++ + R R LLAD+ G GKTI Sbjct: 77 ALAIEGERYHFASLYDPILAVSVSKIAPLPFQIDAVYNHILRNPEIRFLLADDPGAGKTI 136 Query: 186 EAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNP 245 AG+++ + L G AER+LI+VP L QW EM +F F + + E + + Sbjct: 137 MAGLVIKELKLRGLAERILIVVPGHLVPQWKREMKEKFQEEFTIVNREIF----RTTTDV 192 Query: 246 FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAP----SREYQAIEQ 301 + E+ VI S+DF ++ + L+ L +WDL++VDEAH + ++ Y+ E Sbjct: 193 WRREKQVIASIDFLKQ-EDILKSLENVDWDLVIVDEAHKMAAYRFGKKIYRTKRYKVGEV 251 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEE-QKNYRPV 352 L+ + +L LTATP + E+ L LL P F D +E ++N P+ Sbjct: 252 LSRNSTHMLFLTATPHKGDPENFRLLLDLLVPGLFSDKEILLEAIRRNENPI 303 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 36/52 (69%) Query: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 AQV++ +E EG N QF ++ +D+P+NP+ LEQRIGR+ R GQ + + I Sbjct: 535 AQVMVATEAAGEGINLQFCHLLINYDIPWNPNRLEQRIGRVHRYGQRYPVHI 586 >UniRef50_C6WH64 Helicase domain protein n=3 Tax=Actinomycetales RepID=C6WH64_ACTMD Length = 1131 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 94/187 (50%), Gaps = 7/187 (3%) Query: 155 IPHQLNIAH-DVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 +PHQ+ + ++ R R LLAD+ G GKT+ AG+ L + LL R L++VP L Sbjct: 104 LPHQIRAVYGELLERRPLRFLLADDPGAGKTVMAGLYLKELLLRDDVRRCLVVVPGGLVD 163 Query: 214 QWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAE 273 QW E+ +F L F + A F L+I +D R++Q L EAE Sbjct: 164 QWQDELFLKFGLGFEVLSPSMADAALGSGV--FAKHPLLIARMDQLARNEQLSAQLDEAE 221 Query: 274 WDLLVVDEAH----HLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLR 329 +DL+VVDEAH H + ++ +Q E+L + +LL+TATP E L Sbjct: 222 FDLVVVDEAHRMGAHHFGGKVNRTKRFQLGERLRDRTRHLLLMTATPHSGKEEDFQLFLT 281 Query: 330 LLDPNRF 336 LLDP+ F Sbjct: 282 LLDPDGF 288 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 534 FHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQR 593 H G++ R F + +VLL ++ EG N Q A +V +DLP+NP+ +EQR Sbjct: 530 IHGGVNRFRRREITEEFTA-NPACRVLLATDAAGEGLNLQAAHMVVNYDLPWNPNRIEQR 588 Query: 594 IGRLDRIGQ 602 GR+ RIGQ Sbjct: 589 FGRVHRIGQ 597 >UniRef50_A0L7C3 Helicase domain protein n=3 Tax=Bacteria RepID=A0L7C3_MAGSM Length = 954 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 106/206 (51%), Gaps = 4/206 (1%) Query: 144 YSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERV 203 Y+G R + +P+QL+ A ++ R+L+AD VGLGKT+EAG+++ + + G +R+ Sbjct: 103 YTGHRAAMDA-VPYQLDPAIQALQQPRQRILIADSVGLGKTLEAGILVSELIRRGRGKRI 161 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDD---ERYAEAQHDAYNPFDTEQLVICSLDFAR 260 L+ +++ Q+ E RF + D +R +NPF I S+D + Sbjct: 162 LVAAVKSMLTQFQKEFWSRFTIPLTRLDSIGLQRIRSRIPTNHNPFHYFDKSIVSIDTLK 221 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG 320 + + +L A WD++++DEAH++ S + + L+ +++L+ATP Sbjct: 222 QDAEYRTYLENAWWDIIIIDEAHNVAERGKGASLRSRLAKLLSTRSDTLIMLSATPHDGS 281 Query: 321 MESHFARLRLLDPNRFHDFAQFVEEQ 346 ES + + +LDP + ++ +++ Sbjct: 282 AESFASLMNMLDPTAIANPGEYTKDE 307 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 3/92 (3%) Query: 533 VFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLE 591 + H MS +E+ + F +++ ++L+ S++ SEG N + H M+ FD+P++ + + Sbjct: 480 ILHGSMSDVEQQQVVEAFGKDEEPVRLLIASDVASEGINLHYLCHRMIHFDIPWSLMVFQ 539 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVR 623 QR GR+DR GQ H+ YL +Q+ +R Sbjct: 540 QRNGRIDRYGQEQ--TPHIVYLTTNSQNDKIR 569 >UniRef50_D1JIN1 Putative uncharacterized protein rapA n=1 Tax=uncultured archaeon RepID=D1JIN1_9ARCH Length = 1120 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 12/191 (6%) Query: 155 IPHQLNIAHDVGRRHAP-RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 +PHQ+ + R R L+AD+ G GKTI AG+I+ + + +LI+ P L++ Sbjct: 99 LPHQIEAVYSYALRDPKIRFLIADDAGAGKTIMAGLIIKELQYRNLVKNILIVAPGHLKY 158 Query: 214 QWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAE 273 QW EM +F F L + R + N ++T + S+DF ++ ++ L + Sbjct: 159 QWQREMKSKFGTNFTLVN--RSLMESNWGQNIWETHNCCVASIDFLKQD-DIIQKLRASS 215 Query: 274 WDLLVVDEAHHL----VWSEDAP----SREYQAIEQLAEHVPGVLLLTATPEQLGMESHF 325 WDL+VVDEAH + + P ++ Y+ E L+E +L LTATP + E+ Sbjct: 216 WDLVVVDEAHKMSAYGYKTRKGPKVEKTKRYKVGEILSEIATHMLFLTATPHRGDEENFR 275 Query: 326 ARLRLLDPNRF 336 L LL P F Sbjct: 276 LFLDLLRPGFF 286 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 3/82 (3%) Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNP 587 G + H M + R A F E Q+++ +E EG N QF S MV +D+P+NP Sbjct: 507 GYKVNTIHGSMGMDARIEAEHRFKNE---TQIMVATEAAGEGINLQFCSLMVNYDIPWNP 563 Query: 588 DLLEQRIGRLDRIGQAHDIQIH 609 + LEQR+GR+ R GQ ++ I+ Sbjct: 564 NRLEQRMGRIHRYGQDKEVFIY 585 >UniRef50_A9WJK0 Helicase domain protein n=2 Tax=Chloroflexus RepID=A9WJK0_CHLAA Length = 1189 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 102/196 (52%), Gaps = 14/196 (7%) Query: 152 TSLI---PHQLNIAHDVGRRHAP-RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIV 207 TSL+ PHQ+ ++ P R LLAD+ G GKTI AG+++ + + G +R L+I Sbjct: 100 TSLVEPLPHQITAVYEAMLPRQPLRFLLADDPGAGKTIMAGLLMKELIARGDLQRCLVIC 159 Query: 208 PETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLE 267 P L QW E+ RRF+L F + ++ A+ N F LVI LD R +Q Sbjct: 160 PGNLVEQWQDELDRRFHLPFEILTNDGLEAAR--TGNWFLEHPLVIARLDKLARDEQAQA 217 Query: 268 HLCEAE--WDLLVVDEAHHLVWS----EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGM 321 L + +DL+V+DEAH L S E ++ YQ + ++ LL+TATP G Sbjct: 218 KLAAPDNRYDLVVIDEAHKLSASFFGGEIKYTKRYQLGQLVSRLTRHFLLMTATPHN-GK 276 Query: 322 ESHFAR-LRLLDPNRF 336 E+ F L LLD +RF Sbjct: 277 EADFQLFLALLDADRF 292 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 3/102 (2%) Query: 503 SQKVLVICAKAATALQLEQVLREREGIRAAV--FHEGMSIIERDRAAAWFAEEDTGAQVL 560 +QK++V T LE+ + G AV H GM ER +A F D +VL Sbjct: 526 TQKLVVFTEHRDTLTYLERKINGLFGRPDAVVVIHGGMGREERRKAQEQFLH-DPAVRVL 584 Query: 561 LCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 + ++ EG N Q A MV +DLP+NP+ LEQR GR+ RIGQ Sbjct: 585 VATDAAGEGINLQRAHLMVNYDLPWNPNRLEQRFGRIHRIGQ 626 >UniRef50_B1WTF4 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WTF4_CYAA5 Length = 1072 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 108/208 (51%), Gaps = 23/208 (11%) Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 R+L+ADEVGLGKTIE+ I + + A R+LI+ P L+ +W+ ++ RFNL + D Sbjct: 126 RLLIADEVGLGKTIESMYIWKELQIREDARRLLIVCPAMLRDKWVNDLRNRFNLYAEIID 185 Query: 232 DERYAE-AQHDAYNPFDTEQLVICSLDFAR-----------RSKQRLEHLCEAE------ 273 + E Q N L + SL+ R ++ +L L E Sbjct: 186 TKGLLEKVQSFTQNGTPDSFLYVTSLEGMRVKNWDDEKKSNDTRAKLARLLEENPVIDDR 245 Query: 274 --WDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLL 331 +DL+++DEAH+L E A ++ + +++ + ++LLTATP Q+ + + L+L+ Sbjct: 246 GIFDLVIIDEAHYLRNPETANNKLGNLLREVSRY---LILLTATPIQIRSNNLYQLLKLI 302 Query: 332 DPNRFHDFAQFVEEQKNYRPVADAVAML 359 P+ F D F + ++ +P+ DA+ ++ Sbjct: 303 SPDDFFDSTNFEKMLEDNKPIVDALKLI 330 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 31/279 (11%) Query: 491 VEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF 550 ++ L L + +K ++ T L + L+E +GI + GM ++ F Sbjct: 549 IQCLKQKLAENPKEKFVLFAFYRNTLTYLAERLQE-DGIEICLILGGMDKEDKQDKLKSF 607 Query: 551 AEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD-IQIH 609 +++ VLL SE+GSEG + QF ++ +DLP+NP +EQRIGRLDR+ Q + I I Sbjct: 608 -QDNNQISVLLSSEVGSEGIDLQFCRFLINYDLPWNPMRVEQRIGRLDRLNQKSETISII 666 Query: 610 VPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKN 669 L+ T + ++ +E + FE + I +L+ L +P E +L + Sbjct: 667 NFSLKDTIEEYILERLYERIHIFEESIGDLEEILGEKTEELMLDLLNPKLNEK--ELKEE 724 Query: 670 CREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGIN 729 Q A+ Q+E R + +++ NL+AF+ D I Sbjct: 725 ADRQIRAIADQMELER---------------------KLENEAMNLVAFS----DYILST 759 Query: 730 QDDRGDNMIVLTPSD-HMLVPDFPGLSEDGITITFDREV 767 D + LTP + V DF L G IT ++++ Sbjct: 760 VDKSREQKRWLTPDELKAFVEDFFQLQYPGTVITPNQKI 798 >UniRef50_A8H211 Helicase domain protein n=1 Tax=Shewanella pealeana ATCC 700345 RepID=A8H211_SHEPA Length = 1177 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 101/332 (30%), Positives = 149/332 (44%), Gaps = 32/332 (9%) Query: 31 TLLFPSTGENRLYARS----DSPVTRVMFNPGDTIT-SHDGWQMQ-VEEVKEENGLLTYI 84 TLL G+++ Y S S + R GD I H W ++ V E+N L Sbjct: 86 TLLAVFDGDSKAYDVSGLFASSRIDREAPISGDVIRLRHRQWLVEDVIPPPEQNQLTLIK 145 Query: 85 GTRLDTEESGVALREVFLDSKLVFSKPQDRL--FAGQIDRMDRFALRYRARKYSS----- 137 LD + G + +V + +L + Q ++ ID FA A K++S Sbjct: 146 AVCLDDDNQGETI-DVLWEMELGANVVQQKMGGLGANIDEPRHFAAYLHALKWNSVTATD 204 Query: 138 -EQFRMPY-SGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQL 195 F+ P+ +G+ Q L P L A + R + + +AD+VGLGKTIEAG++L + L Sbjct: 205 RNLFQAPFRAGIMLQAHQLEP--LRRALSLPRAN---LFIADDVGLGKTIEAGLVLQELL 259 Query: 196 LSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD---AYNPFDTEQLV 252 L E +LI P ++ QW EM +RF L+F + + + + NP+ T Sbjct: 260 LRQRVEFILISCPASVCLQWRDEMFKRFGLQFEVMNRALVERRRRERGFGVNPWSTHNRF 319 Query: 253 ICSLDFARRSKQRLEHLC----EAEWDLLVVDEAHHLVWSEDA----PSREYQAIEQLAE 304 I S D RR + R L +A+ LLV+DEAH S + S + I +A Sbjct: 320 IISHDLLRRPEYREPLLNTLGDKAKRSLLVLDEAHVAAPSSASNYATDSNITKVIRDVAP 379 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 L L+ATP S + L LLDP RF Sbjct: 380 RFENRLFLSATPHNGHSNSFASLLELLDPQRF 411 >UniRef50_B2IY28 Helicase domain protein n=5 Tax=Cyanobacteria RepID=B2IY28_NOSP7 Length = 1103 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/298 (28%), Positives = 132/298 (44%), Gaps = 44/298 (14%) Query: 145 SGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVL 204 +GL +L PHQ+ + V R LLADEVGLGKTIEAG IL Q LL + Sbjct: 149 TGLISANINLYPHQVEVVRRVLEDPIQRYLLADEVGLGKTIEAGAILRQFLLDEPKRGAV 208 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQ 264 ++VP+ L QW E+ +F + + F V+ D + + Sbjct: 209 VLVPQYLLKQWRTELENKFYI------------------SHFGKRVAVLAVEDIHKIN-- 248 Query: 265 RLEHLCEAEWDLLVVDEAHH---LVWSEDAPSRE-YQAIEQLAEHVPGVLLLTATPEQLG 320 +A L++DEAHH + S+DA R+ +Q ++LA +LLL+ATP Sbjct: 249 -----LKARIGCLILDEAHHIAAMATSKDATVRQRFQTCKELAHKSDRLLLLSATPVLNH 303 Query: 321 MESHFARLRLLDPNRFH--DFAQFVEEQKNYRPVADAVAMLLAGNK--LSNDELNMLGEM 376 + A L LLDP + D A F + ++ + + + G + + L L + Sbjct: 304 EQDFLAMLHLLDPATYKIGDLAGFRAKVESRQEIGRLLLSFKEGAEPAVLKSNLQQLRNL 363 Query: 377 IGE--------QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVK 426 + E D+E LQA +++ + A + VS + H R + RN R V+ Sbjct: 364 VTEDKYLQKLADDLENCLQANSTEQDQIVQAIRTHVSDIYRLH---RRMLRNRRAAVE 418 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 5/139 (3%) Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV---PYLEK 615 +L+C G EG N QFA ++ FDLP++P+ LEQR+GRLDRIG +Q V PYLE Sbjct: 635 ILVCDRSGEEGLNLQFADWLIHFDLPWSPNQLEQRLGRLDRIGSKIGVQSCVLIGPYLED 694 Query: 616 TAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHE 675 + + + +G F+ + + + D +L L G ++I +EQ E Sbjct: 695 SPHNAWYQVLKDGFGIFQQSIASLQFYVDDKLAELETALFQ-SSAAGLLEMISPIQEQIE 753 Query: 676 ALKAQLEQGRDRLLEIHSN 694 A A++ + ++ L EI +N Sbjct: 754 AEIAKISE-QNALDEIDAN 771 >UniRef50_UPI0001BC7C8F helicase domain protein n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC7C8F Length = 1046 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 18/265 (6%) Query: 109 SKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRR 168 S P +R +G ++ R A K + S L+ +T +Q Sbjct: 57 SDPFERCKSGIYGSYSEYSKRNTAFKIKNSN-NSTISSLKASKTLFRAYQFKPLLKFLNS 115 Query: 169 HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFA 228 R+L+ADEVGLGKTIEAG I+ + + VLI+ P++LQ +W E+ +F L F Sbjct: 116 PNRRLLVADEVGLGKTIEAGHIMLELKARRELKNVLIVCPKSLQEKWKAELYEKFGLTFK 175 Query: 229 LFDDERYAEAQHDAYNP-----FDTEQLVI---CSLDFARRSKQRLEHLCE------AEW 274 + D+ + A A + E++ + + D R + R +L + + Sbjct: 176 IVDNAKDLIADLQAKTGTVRAIVNYEKVRMRKRATKDEQRGGEHRYTNLIDYLSENPQRF 235 Query: 275 DLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN 334 L++ DEAH + E ++ Y+ E + L LTATP + E+ + L LLD + Sbjct: 236 SLVLCDEAHKMRNRE---TQTYKGSEIIMSCADAALFLTATPIMISEENLYNLLHLLDNS 292 Query: 335 RFHDFAQFVEEQKNYRPVADAVAML 359 R+ + F+ K RP +A+ +L Sbjct: 293 RYFNPQIFMNRLKENRPFVEAITLL 317 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 5/121 (4%) Query: 488 DPRVEWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDR 545 D +VE L + + K LV+ A L+ + ++ G A + H + R Sbjct: 493 DAKVEELQRIIEAVFKSGTKKLVVFALFRRTLKYLHIRLKKAGYNALIIHG--QVENRAE 550 Query: 546 AAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD 605 F ++D +LL SE+GSEG + QF + MV +DLP+NP ++EQRIGR+DR GQ Sbjct: 551 ILTQF-KKDKNTHILLSSEVGSEGLDMQFCNSMVNYDLPWNPMVVEQRIGRIDRFGQKAK 609 Query: 606 I 606 + Sbjct: 610 V 610 >UniRef50_Q5V7B8 Putative DEAD/H helicase n=1 Tax=Haloarcula marismortui RepID=Q5V7B8_HALMA Length = 1212 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 78/245 (31%), Positives = 112/245 (45%), Gaps = 40/245 (16%) Query: 156 PHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQW 215 PHQ I+ + +L DEVGLGKTIEAG+ L + + G AE+ L +VP L QW Sbjct: 262 PHQRTISDTAVSIYPNNLLFCDEVGLGKTIEAGLTLSRLMQVGEAEQALFLVPAGLVQQW 321 Query: 216 LVEMLRRFNLRFALFDDERY--------------------AEAQHDAY-----NPFDTEQ 250 E+L RFN+ A + + Y DA+ F TE+ Sbjct: 322 QNELLDRFNIH-AYYHERSYDGDYMIGPLGDAEDHRIPTSGAVDADAWENTPIGSFVTER 380 Query: 251 ----LVICSLDFARRSKQR---LEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLA 303 +VI S ARR + + E WDL VVDEAH S ++ Y + Q Sbjct: 381 DEPTVVIESWHTARREGNQGHVAPRIDENVWDLTVVDEAH----SAREETKLYDLLGQAE 436 Query: 304 EHVPGVLLLTATPEQLGMESHFARLRLLD-PNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 E + LTATP QL + + LRL D P + D +FVE + + + D+++ + G Sbjct: 437 EASRCLYALTATPMQLNVGELYDLLRLCDLPEGWDDKDRFVEFFETRQALEDSLSTV--G 494 Query: 363 NKLSN 367 ++ N Sbjct: 495 SRYQN 499 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 11/192 (5%) Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 G I+RD F + DT +L+C++ SEG N Q A ++ FDLP+NP +EQRIGR Sbjct: 840 GKEAIKRD-----FTDGDT--NILICTDSASEGLNLQTADALINFDLPWNPMRVEQRIGR 892 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEG-LDAFEHTCPTGRTIYDSVYNDLINYLA 655 +DRIGQ +++ + Y K + + EG L FE+ R + +S+ D+ + + Sbjct: 893 IDRIGQKNEVVKIINYAYKDSIDGDIYEELEGRLQLFENVVGPMRPVLNSIEQDIKDAVM 952 Query: 656 SPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 + G DD + + E ++ ++ +++ E G + A E+I E Sbjct: 953 G---SSGSDDTREPSEQVVEEADSRAKRAQEKAEETGLAGEPEEVATKEAIIESSGLDGW 1009 Query: 716 IAFAMNLFDIIG 727 + FD IG Sbjct: 1010 EPYCYPAFDEIG 1021 >UniRef50_C8NCL6 Helicase/SNF2 domain protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCL6_9GAMM Length = 937 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 114/222 (51%), Gaps = 25/222 (11%) Query: 146 GLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLLSGAAERV 203 L + L PHQ++ A +H V+LADEVGLGKTIEAG+ L QL + R+ Sbjct: 34 ALMNAQVDLHPHQIDAAL-FALKHPLHEGVMLADEVGLGKTIEAGLTLC-QLWAERRRRL 91 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSK 263 L++ P +L+ QW E+ +F L + + + PF + ++I S +FAR+ Sbjct: 92 LVVCPASLRKQWQEELYEKFALPGVIAE---------GSLPPF-ADGVLIMSYEFARKYA 141 Query: 264 QRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMES 323 L+ A+WD +V+DEAH L + ++ QA+ ++A LLLTATP Q + Sbjct: 142 ALLQ---AADWDCVVLDEAHKLRNAYKDSNKIGQAL-RIAFAGKKKLLLTATPLQNSLME 197 Query: 324 HFARLRLLDPNRFHDFAQFVEE---QKNYRPVADAVAMLLAG 362 + LDP F D QF + QKN +DA+ + L G Sbjct: 198 LYGLSLFLDPYLFGDAKQFRHDFITQKN----SDALRLRLRG 235 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 41/68 (60%) Query: 541 IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI 600 + D+ AA AQ+++ +E +EG N QF S ++ +DLP+NP +EQRIGR R Sbjct: 470 VSADKRAALIDRFRHDAQIMIATEAAAEGVNLQFCSLLINYDLPWNPQRVEQRIGRCHRY 529 Query: 601 GQAHDIQI 608 GQ D+ + Sbjct: 530 GQESDVVV 537 >UniRef50_A6WGB4 Helicase domain protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WGB4_KINRD Length = 1069 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 95/208 (45%), Gaps = 27/208 (12%) Query: 154 LIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 L PHQ+ V R R LLADEVGLGKTIEAG++L Q LL V++I P+ L+ Sbjct: 161 LYPHQIETVLQVMRDPIQRYLLADEVGLGKTIEAGLLLRQYLLDNPTGSVVVIAPDVLRR 220 Query: 214 QWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAE 273 QW E+ +F DD F +L I A S QR + Sbjct: 221 QWQDELRAKF-----FVDD-------------FPRSRLRIV----AHESPQRW--FSDTP 256 Query: 274 WDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDP 333 D +++DEAH LV + +E + + +L P +LLL+ATP + L LLDP Sbjct: 257 EDFVIIDEAHRLV-GQRRSLQEVENLRRLCHGTPRLLLLSATPALNNERAFLELLNLLDP 315 Query: 334 NRFH--DFAQFVEEQKNYRPVADAVAML 359 + D A F + +A A L Sbjct: 316 KIYDVADLAGFTARVRARHEIAKAFYAL 343 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 3/101 (2%) Query: 502 RSQKVLVICAKAATALQLEQVLRER-EGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVL 560 + Q++++ QL LR + G++ A S ER+ + A + + +VL Sbjct: 558 KHQQIVMFVDSTLVGHQLAAALRAKFRGLQVAEHFTDQSPTEREESVAQWRRGSS--RVL 615 Query: 561 LCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 +C EGRNFQ A MV +LP + + LEQRIGR+DR G Sbjct: 616 ICDSSAEEGRNFQDADAMVHVNLPSSVNRLEQRIGRVDRHG 656 >UniRef50_B8L1P8 ATP-dependent helicase HepA n=2 Tax=Proteobacteria RepID=B8L1P8_9GAMM Length = 929 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 6/169 (3%) Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 R+L+AD+VG+GKTIEAG+I + + G RV I+ P L QW E+ RFNL+ Sbjct: 121 RLLIADDVGIGKTIEAGLIARELMDRGEITRVAILCPPHLVEQWQSELETRFNLQAVALT 180 Query: 232 DERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 + + D FD +V+ SLD+ + + R + L A + ++VDEAH S Sbjct: 181 SSSASRIERDLPHGVRLFDHHPVVVVSLDYIKSERHREQFLATAP-ECIIVDEAHTCASS 239 Query: 289 EDAPSREYQAIEQLAEHVP-GVLLLTATPEQLGMESHFARLRLLDPNRF 336 ++ +++LA ++LLTATP + + L LLDP RF Sbjct: 240 GAGKQLRFELLQRLARDAQRHLILLTATPHSGDETAFYNLLSLLDP-RF 287 >UniRef50_B1L4S2 Helicase domain protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L4S2_KORCO Length = 975 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 24/199 (12%) Query: 157 HQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWL 216 HQ + + R+ RVL+ DE+GLGKTI A I G + LIIVP L QW Sbjct: 41 HQCEVLARLALRNPVRVLIGDEIGLGKTITALAISRYMEGVGRVSKALIIVPRVLIPQWR 100 Query: 217 VEMLRRFNLRFALF--DDERYAEAQH--DAYNPFDTEQLVICSLDFARRSKQRLEHLCEA 272 E+ R + D+ Y + Q D Y + S+DF +R K R++ + + Sbjct: 101 KELERMGIGKVNQIERDNIEYLKKQGFPDGY--------YLSSMDFIKREK-RIKEVLDV 151 Query: 273 EWDLLVVDEAHHLVWSEDAPSREYQAI-EQLAEHVP--GVLLLTATPEQLGMESHFARLR 329 WD+++VDEAH L ++ ++ + +L E P V+ L+ATP + + +RLR Sbjct: 152 PWDIIIVDEAHKL----GMKTKRFKEVGRELIERKPRRNVIFLSATPHRGDPADYISRLR 207 Query: 330 LLDPN----RFHDFAQFVE 344 LLDP R D QF E Sbjct: 208 LLDPYLEDWRSLDRKQFYE 226 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 50/78 (64%) Query: 552 EEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVP 611 E D A+VL+ +++ +EG N Q A ++ +++P++ LEQRIGR+ R+GQ +++I+ Sbjct: 463 ERDPRARVLIATDVAAEGLNLQVAHILINYEVPWSLIKLEQRIGRVWRLGQRREVEIYTL 522 Query: 612 YLEKTAQSVLVRWYHEGL 629 ++ A S +R +E L Sbjct: 523 FMANKADSTALRSIYEKL 540 >UniRef50_B4WUE7 Helicase conserved C-terminal domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WUE7_9SYNE Length = 1117 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 80/265 (30%), Positives = 120/265 (45%), Gaps = 37/265 (13%) Query: 99 EVF----LDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSS------EQFRMPY-SGL 147 EVF +D+KL+ + D + + D F+ + +++ F+ PY +G+ Sbjct: 73 EVFWEREIDAKLIGAATWDAVVSQGFDNPRYFSAYFHTLRWNCVTSTDPRLFQAPYRAGI 132 Query: 148 RGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLLSGAAERVLI 205 L P + + PRV +AD+VGLGKTIEAG+IL + LL +RV+I Sbjct: 133 EVNAYQLEPLRKAL-------RMPRVNLFIADDVGLGKTIEAGLILREMLLRQKIKRVVI 185 Query: 206 IVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD---AYNPFDTEQLVICSLDFARRS 262 P ++ QW EM RF L F ++D A + A NP+ T I S R Sbjct: 186 SAPPSVVQQWKEEMESRFGLTFTIYDRAYVARMRRSRGYAINPWTTHNRFIISHALLRNE 245 Query: 263 KQRL---EHLCE-AEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGV-------LL 311 + L E + + ++DEAH+ + A S +Y QL + V + L Sbjct: 246 TYAAPLRDWLGEFSAGSMFILDEAHN---AAPASSSKYAVDSQLTKTVRNLAPRFEHRLF 302 Query: 312 LTATPEQLGMESHFARLRLLDPNRF 336 L+ATP S A L +LDP RF Sbjct: 303 LSATPHNGHSNSFAALLEILDPQRF 327 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 9/113 (7%) Query: 503 SQKVLVICAKAATALQLEQVL------REREGIRAAVFHEGMSIIERDRAAAWFAEEDTG 556 + +VL+ T LEQ L +R R FH G+ R++ A F + Sbjct: 558 NHRVLIFTEYTDTKRYLEQQLGAIIAESDRAQKRIETFHGGIGDERREQVKAAFNADPAA 617 Query: 557 --AQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 ++L+ ++ EG N Q + +++ FD+P+NP +EQR GR+DR Q D+ Sbjct: 618 HPLRILIATDAAREGVNLQNYCANLFHFDVPWNPSRMEQRNGRIDRKLQKADL 670 >UniRef50_Q3MDI7 SNF2-related Helicase n=2 Tax=Cyanobacteria RepID=Q3MDI7_ANAVT Length = 1082 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 65/181 (35%), Positives = 88/181 (48%), Gaps = 17/181 (9%) Query: 171 PRVLL--ADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFA 228 PRV L AD+VGLGKTIEAG+IL + L+ RVLI P ++ QW EM RF L F Sbjct: 124 PRVALFIADDVGLGKTIEAGLILREMLMRQKVRRVLISCPPSVVRQWQEEMESRFGLTFV 183 Query: 229 LFDDERYAEAQHD---AYNPFDTEQLVICSL------DFARRSKQRLEHLCEAEWDLLVV 279 +FD E A + + NP+ T I S +A + L A +L++ Sbjct: 184 IFDREFVASRRQERGYGINPWTTHSRFIISHALLRDETYAAPLRDWLGDFTGA--SMLIL 241 Query: 280 DEAHHLVWSEDAP----SREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNR 335 DEAH+ + A S+ + + +A L L+ATP S A L +LDP R Sbjct: 242 DEAHNAAPASGAKYAVDSQLTRTVRDIAPRFEHKLFLSATPHNGHSNSFAALLEILDPQR 301 Query: 336 F 336 F Sbjct: 302 F 302 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 34/174 (19%) Query: 481 NATWWNFDPRVEWLMGYLTSHRS------------QKVLVICAKAATALQLEQVLRE--- 525 N + DPRVE L+ ++ + ++V++ T L+Q L+E Sbjct: 482 NQARYQADPRVEKLVAWIKQNLCPDLGKPNAAWLEKRVIIFTEYTDTKRYLQQKLQEAIA 541 Query: 526 ------------REGIRAAVFHEGMSIIERDRAAAWFAEEDT--GAQVLLCSEIGSEGRN 571 R R VFH G+ R+ F + ++L+ ++ EG N Sbjct: 542 GSDKERDSEALRRNAERIDVFHGGIGEERREAIKNAFNADPLRHPLRILIATDAAREGVN 601 Query: 572 FQF-ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYL---EKTAQSVL 621 Q + + FD+P+NP +EQR GR+DR Q I +H Y ++T VL Sbjct: 602 LQNNCADLFHFDVPWNPSRMEQRNGRIDRKLQRSPI-VHCYYFVLAQRTEDKVL 654 >UniRef50_Q8U3A6 ATP-dependent RNA helicase hepa, putative n=2 Tax=Pyrococcus RepID=Q8U3A6_PYRFU Length = 940 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 15/185 (8%) Query: 153 SLIP--HQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPET 210 +IP HQ + R+++ADE+GLGKTI+A +I G E+ LI+VP+ Sbjct: 24 GIIPFKHQFQTLYHAMLMRPVRLMIADEIGLGKTIQALLIAKYLDFRGEIEKALIVVPKV 83 Query: 211 LQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLC 270 L+ QW E+ R L A E +E + P + I S+D A+R E + Sbjct: 84 LREQWREEVKR--ILEEAPEVIENGSEIEWKLKRP---RKYFIISIDLAKRYT---EEIL 135 Query: 271 EAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVP-GVLLLTATPEQLGMESHFARLR 329 +WDL++VDE H+ ++ Y+ +++L ++ V+ L+ATP + + ARLR Sbjct: 136 RQKWDLVIVDEVHNATLG----TQRYEFLKELTKNKDLNVIFLSATPHRGNNRDYLARLR 191 Query: 330 LLDPN 334 LLDP Sbjct: 192 LLDPT 196 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 12/153 (7%) Query: 518 QLEQVLREREGI-----RAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNF 572 +L +LR + GI A H GM E +R F E A +L+ +++ SEG N Sbjct: 410 RLPDILRRKHGIVLEKDDIAKLHGGMKSEEIEREINKFHER---ANLLVSTDVASEGLNL 466 Query: 573 QFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYL-EKTAQSVLVRWYHEGLDA 631 AS ++ ++ P++P LEQR+GR+ R+ Q + + + +L +T VL Y + ++ Sbjct: 467 HVASVVINYEAPWSPIKLEQRVGRIWRLNQTRETKAYTIFLATETDLDVLNNLYRKIMNI 526 Query: 632 FEHTCP---TGRTIYDSVYNDLINYLASPDQTE 661 E GR I++ + +L N A + E Sbjct: 527 KEAVGSGPIIGRPIFEGDFENLWNEGAEEENRE 559 >UniRef50_D0TGQ7 Helicase domain-containing protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TGQ7_9BACE Length = 932 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 6/166 (3%) Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 PR+L+AD VGLGKTIE G+ L + + +R+L+ +++ Q+ E+ RF + Sbjct: 122 PRLLIADGVGLGKTIEVGIFLAEMIRRSRGKRILVCALKSILAQFQEEIWNRFAIPLVRL 181 Query: 231 DDERYAEAQHDA---YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 D A+ Q++ NPFD I S+D + + + L + WD++V+DE H + Sbjct: 182 DSLGVAKIQNEIPLNKNPFDYYDKTIISIDTLKNNGRFRAWLEKTHWDIIVIDECHKV-- 239 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDP 333 + D+ R A + LA+ ++L +ATP ES +R+L+P Sbjct: 240 ANDSSLRGDLA-QFLAQRCDSMILTSATPHNGSAESFANLMRMLEP 284 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 17/138 (12%) Query: 469 YPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQ-VLRERE 527 Y + Y F+ WN +P+ +++++ + AT LE+ ++RE + Sbjct: 404 YEDSRYDAFKKVLTELWNKNPK-------------ERIVIFTERIATMKYLEERIIREFK 450 Query: 528 GIRAAVFHEGMSIIERDRAA--AWFAEEDTGAQVLLCSEIGSEGRNFQFASH-MVMFDLP 584 + V S+++ ++ A FA+ED+ V + S+ GS+G N + H M +D+P Sbjct: 451 LNKEQVVRFDGSLLDTEQEAMVGNFAKEDSKISVFISSDSGSQGVNLHYYCHIMFNYDIP 510 Query: 585 FNPDLLEQRIGRLDRIGQ 602 ++ LEQR GR+DR GQ Sbjct: 511 WSLITLEQRNGRIDRYGQ 528 >UniRef50_C9YVZ8 Putative helicase SNF2 family protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YVZ8_STRSW Length = 987 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 9/176 (5%) Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 PR+L+AD VGLGKT+E G++L + + G ER+L++ P+ + Q+ E+ RF + Sbjct: 126 PRILIADVVGLGKTLEIGVLLAELIRRGRGERILVVTPQHVLEQFQRELWTRFAIPLVRL 185 Query: 231 DDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 D Q + NPF + I S+D +S HL +WD +V+DE+H+LV Sbjct: 186 DSTGIQRVQQEIPAGRNPFAYFKRAIISVD-TLKSDVYAHHLEHTDWDAVVIDESHNLV- 243 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL-RLLDPNRFHDFAQF 342 + ++ LA+ ++L +ATP G + FA L ++LD D +++ Sbjct: 244 --NRGTKNNALARLLAQKTDALVLASATPHN-GDAASFAELIKMLDEAAIADPSKY 296 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 550 FAEEDTGAQVLLCSEIGSEGRNFQFASHMVM-FDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 F D ++L ++ SEG N H+++ +DLP++ +EQR GR+DR GQ H Q Sbjct: 528 FGLRDDPVRILFTGDVASEGVNLHQQCHLLIHYDLPWSLIRIEQRNGRIDRYGQEHQPQF 587 >UniRef50_B8KMQ8 Putative helicase, Snf2 family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMQ8_9GAMM Length = 1167 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 33/210 (15%) Query: 156 PHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL--QH 213 P+Q + PR+L+AD+VG+GKTIEA +I+ + E VL+I P+ L +H Sbjct: 257 PYQFRPVMKLIAADRPRLLIADDVGVGKTIEAALIIKELQARQPLESVLVICPKQLVVEH 316 Query: 214 QWLVEMLRRFNLRFALFD--------DE---------RYAEAQHDAYNPFDTEQLVICSL 256 +W E L+RF+ F D DE RYA+A Y+ D E+L++ + Sbjct: 317 KWRNE-LKRFDEDFVELDSATLRYCIDETRLEGKWPSRYAKAIL-PYSLLD-EKLLLGNT 373 Query: 257 DFARRSKQRLEHLCEAEWDLLVVDEAHHL----VWSEDAPSREYQAIEQLAEHVPGVLLL 312 D + L + A +DL++VDEAHH+ WS ++ I+ L + +L+ Sbjct: 374 DGKNKRHGLLSLIPPAAFDLILVDEAHHIRNTNTWS-------HRNIKHLLDSAKAAVLI 426 Query: 313 TATPEQLGMESHFARLRLLDPNRFHDFAQF 342 +ATP Q G F L+LL P+ A+F Sbjct: 427 SATPIQTGATDLFNLLQLLRPDVLVAPAEF 456 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 7/121 (5%) Query: 488 DPRVEWLMGYLTSHR---SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERD 544 DP++E L+G + + + K+L+ T L L E G R + H G++ ER Sbjct: 661 DPKLEALVGIIREKQLMDNNKLLIFSTFRHTLSYLLPRL-ESAGARVGLVHGGIADDERR 719 Query: 545 RAAAWFA---EEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 + A FA E T VLL SE+G+EG + QF +V +D+P+NP +EQRIGR+DR G Sbjct: 720 QTRARFALNKAEPTAFDVLLSSEVGTEGLDNQFCDTLVNYDIPWNPMRIEQRIGRIDRRG 779 Query: 602 Q 602 Q Sbjct: 780 Q 780 >UniRef50_A1RYV5 Helicase domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RYV5_THEPD Length = 813 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/182 (37%), Positives = 86/182 (47%), Gaps = 18/182 (9%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLII 206 LR L HQL+ D PR+LLAD+VGLGKTI+A + + L G VL+I Sbjct: 8 LRSAGKDLYKHQLDFVSDALWFDEPRILLADDVGLGKTIQALLYIKALLELGRVNHVLVI 67 Query: 207 VPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRL 266 VP + QW E L F + F + + + H Y + +LD A + + Sbjct: 68 VPRAVVEQWASE-LEMFEIPFYIVESPDFPLG-HRVY---------LVTLDRA-KVDSYM 115 Query: 267 EHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFA 326 E L + WDL+VVDEAH L R AI L G LLLTATP G ES F Sbjct: 116 EALDKINWDLVVVDEAHKL---RLETLRSKVAI--LCRRARGCLLLTATP-HTGDESSFK 169 Query: 327 RL 328 L Sbjct: 170 FL 171 >UniRef50_UPI0001C15DBC ATP-dependent helicase n=1 Tax=Cylindrospermopsis raciborskii CS-505 RepID=UPI0001C15DBC Length = 961 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 95/180 (52%), Gaps = 7/180 (3%) Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 R+L+AD VGLGKT+E G+++ + + R+L++ +++ Q+ E RF + D Sbjct: 125 RMLIADGVGLGKTLECGVLVAELIARHRGRRILVVTSKSMMAQFQKEFWFRFTIPLVRLD 184 Query: 232 D---ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW- 287 +R +NPF I S+D ++ ++ +L +A WD++++DEAH++ Sbjct: 185 STEVQRIKSIIPTNHNPFYYYDRTIISIDTLKQDREYRNYLEKANWDIIIIDEAHNVAKR 244 Query: 288 --SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEE 345 ED R A+ +L++ ++LL+ATP +S + + +LDP D + + ++ Sbjct: 245 GRGEDNSLRSKLAL-RLSKRSDTLILLSATPHDGKPQSFASLMNMLDPTAIADESDYTKD 303 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 1/60 (1%) Query: 550 FAEEDTGAQVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 F++E ++LL +E+ SEG N + SH ++ FD+P++ L+QR GR+DR GQ+ +I Sbjct: 499 FSKEKDPVRILLATEVASEGINLHYLSHRLIHFDIPWSFMTLQQRNGRIDRYGQSKKPEI 558 >UniRef50_A3ZSC5 Type III restriction enzyme, res subunit n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZSC5_9PLAN Length = 1102 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 105/383 (27%), Positives = 168/383 (43%), Gaps = 56/383 (14%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLF---PSTGENRLY---ARSDSPV---- 50 M ++GQ I+ + + LG+GTVV VD TV++ + P+ ++ S P+ Sbjct: 1 MILSIGQFAIT-SRNMLGIGTVVDVDIDTVSIQYFDSPAPEAVKIVEVCVDSVRPIQLSN 59 Query: 51 -TRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFS 109 TRV + T G + ++ + + G R +ES + F + + Sbjct: 60 ETRVFYRDPTTFRWSVGRVLDFQKDTRKYLVCFPNGHRELLKESTL-----FTRWAMPIA 114 Query: 110 KPQDRLFAGQIDRMDRF---ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVG 166 P + L A Q++ + + YS + + L L+ HQ ++A V Sbjct: 115 DPIE-LLAYQLNETPFWHEGRTSFIQNIYSQRRLSLGMPSLLSSSIDLVEHQFSVARKVL 173 Query: 167 RRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAE-RVLIIVPETLQHQWLVEMLRRFNL 225 R LLADEVGLGKTIE G+++ Q +L E +VL+IVP L QW +E+ RF+L Sbjct: 174 CDPFQRYLLADEVGLGKTIETGILIRQYVLDEPTEHKVLLIVPSVLITQWKLELKLRFDL 233 Query: 226 RFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCE--AEWDLLVVDEAH 283 ++ E+ H S+ +E + + ++V+DEAH Sbjct: 234 ------SDQLGESIHVV-------------------SRDDIEAILQLGPVAGMVVIDEAH 268 Query: 284 HL-VW--SEDAPSRE-YQAIEQL-AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF-- 336 HL W S D R Y + A+ VLLL+ATP + A L L+DP + Sbjct: 269 HLAAWAVSLDPSERSRYNTVAAFTADMQKRVLLLSATPVLNNERAFLAMLHLIDPVLYPL 328 Query: 337 HDFAQFVEEQKNYRPVADAVAML 359 +F F E +N + VA+ + L Sbjct: 329 DEFTAFKERVENRQKVAEVLLSL 351 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 90/360 (25%), Positives = 148/360 (41%), Gaps = 69/360 (19%) Query: 555 TGAQVLLCSEIGSEGRNFQFASHMVM-FDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYL 613 + + VLLC EG N Q S ++ FDLP +P+ +EQRIGRLDR G I+ + L Sbjct: 601 SASSVLLCDATAEEGLNLQKRSACIVNFDLPLSPNRIEQRIGRLDRFGTGKAIKCYNLVL 660 Query: 614 EKTAQSVLVRWYH---EGLDAFEHTCPTGRTIYDS----VYNDLIN-----YLASPDQTE 661 + + ++W H GL F+ + + + + + V+++ I+ + + D+ Sbjct: 661 ASSL--IEIQWNHLLDRGLGVFDQSIASLQYLVEDQLARVWDEFIDAGHEAFEEATDRLG 718 Query: 662 GFDDLIKNCREQHEALKAQLEQGRDRL-----LEIHSNGGE---KAQALAESIE------ 707 G D L+K RE+ L AQ E D LE + + KA AL E+I+ Sbjct: 719 GDDGLVK--RERRIVL-AQDELDSDGFSAKCDLEAFNALAQLDVKASALCEAIDGWMVKR 775 Query: 708 -------EQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHM--------LVPDFP 752 E+ ++ + M + D + DR +++ DH + P P Sbjct: 776 LHFRKSGEKGRHDQVVKYEMCVRDDFKPWKKDRT-SLMPYHEWDHFFRKSLDTDVRPREP 834 Query: 753 GLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPV- 811 +S+ + +TFDR+ A ARE HP + I D G L + Sbjct: 835 VISQTHL-MTFDRQEAQARE-VPLARIGHPFVDAITHQIRLDDRGVCFAMWRYCPELVLD 892 Query: 812 --GTLLVELIYVVEAQ------------APKQLQLNR----FLPPTPVRMLLDKNGNNLA 853 T+ ++ +++EA + L R PP RMLLD + N + Sbjct: 893 EPATIFFQIYFLIEADEAVFRDLKERWPSASITALRRRADDLFPPIAFRMLLDSDLNRIT 952 >UniRef50_A3MU25 Helicase domain protein n=1 Tax=Pyrobaculum calidifontis JCM 11548 RepID=A3MU25_PYRCJ Length = 819 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 107/219 (48%), Gaps = 19/219 (8%) Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 +VLLAD+VGLGKTIE + + SG +VLI+VP L QWL E LR+F F Sbjct: 39 KVLLADDVGLGKTIETLAYVKLGVESGRLAKVLIVVPAALLDQWLDE-LRKFG-----FT 92 Query: 232 DERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA 291 DE A+ P + + ++D A++ + L+ L + WDL+V+DEAH L Sbjct: 93 DEEVYVAREAVLAP--GRPIYVVTMDRAKKD-EYLKLLEQVPWDLVVIDEAHKLRLDT-- 147 Query: 292 PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRP 351 + ++ L E LLLTATP G E +A LR + VEE R Sbjct: 148 ---QRLRLKTLCEKAKSCLLLTATP-HTGDEKSYAILRGTVDKVVRREKRDVEEY-EMRK 202 Query: 352 VADAVAMLLAGNKLSNDELNMLGEMI---GEQDIEPLLQ 387 + + + K + +E L E+I E ++EP+++ Sbjct: 203 IFPNIRYYIVRVKATQEEAKALREIIRLLEEAEVEPIVR 241 >UniRef50_A3V5V0 ATP-dependent helicase HepA n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V5V0_9RHOB Length = 823 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 11/179 (6%) Query: 167 RRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLR 226 R+ R+L+AD+VG+GKTIEAG+IL + L G +R ++ P L QW E+ +F++ Sbjct: 5 RQDVIRLLIADDVGIGKTIEAGLILREMLDRGEIDRFTVLCPPHLVEQWTGELESKFSIP 64 Query: 227 FALFDDERYAEAQHDAYNP---FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAH 283 A + + N F+ + S+DF +S++R A +++VVDEAH Sbjct: 65 ATPVTASEAARLERNLPNTVSIFEAYPFTVVSMDFI-KSERRFFDFKRACPNMVVVDEAH 123 Query: 284 HLVWSEDAPSREYQAIEQLAEHVP-GVLLLTATPEQLGMESHFAR-LRLLDPNRFHDFA 340 V + R Y+ + LA+ +LLLTATP G E+ F L LLD DFA Sbjct: 124 SAVSAGRGRQRRYELVRSLADDPERNLLLLTATPHS-GDETAFHNLLGLLD----RDFA 177 >UniRef50_B3G2N1 SNF2 family-related helicase n=1 Tax=Pseudomonas aeruginosa RepID=B3G2N1_PSEAE Length = 927 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 6/169 (3%) Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 R+L+AD+VG+GKTIEAG+I + + G R+ I+ P L QW E+ RFNL+ Sbjct: 121 RLLIADDVGIGKTIEAGLIARELMDRGEIARLAILCPPHLVEQWQSELETRFNLQAVALT 180 Query: 232 DERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 + + FD +V+ SLD+ + R E A + ++VDEAH S Sbjct: 181 SASAPRIERELPHGMRLFDYHPVVVVSLDYIKSESHR-EQFLAAAPECIIVDEAHTCTSS 239 Query: 289 EDAPSREYQAIEQLA-EHVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 ++ +++LA + ++LLTATP + + L LLDP RF Sbjct: 240 GAGKQLRFELLQRLAKDEQRHLILLTATPHSGDEAAFYNLLSLLDP-RF 287 >UniRef50_D0L7N9 DEAD-like helicase n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L7N9_GORB4 Length = 312 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 10/192 (5%) Query: 102 LDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRM-------PYSGLRGQRTSL 154 D +++F+ LF + F K ++E R+ P + S Sbjct: 45 FDEEMIFADDLSELFIAEDSARWSFTAEPTGFKLATEALRIRMAGNHDPMVAVATSDISP 104 Query: 155 IPHQLNIAH-DVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 +PHQ+ + ++ R R LLAD+ G GKT+ AG+ + +L G R+LI+ P L Sbjct: 105 LPHQIRAVYGELLPRTPLRFLLADDPGAGKTVMAGLYAKELMLRGDLARLLIVAPGGLVD 164 Query: 214 QWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAE 273 QW E+ +F + + E A DA +PF ++I +D R ++ + L +E Sbjct: 165 QWQDELDSKFGIAPTILTRE-LINASIDA-DPFAAHPIMIARMDQLARDEEITDRLARSE 222 Query: 274 WDLLVVDEAHHL 285 WDL+VVDEAH + Sbjct: 223 WDLVVVDEAHRM 234 >UniRef50_C8U0N3 Predicted helicase n=2 Tax=Escherichia coli O103:H2 RepID=C8U0N3_ECO10 Length = 1055 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 38/192 (19%) Query: 154 LIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGA-AERVLIIVPETLQ 212 L P+QL +A V R LLADEVGLGKTIEAG+I+ Q + A V+I+ P L Sbjct: 160 LEPYQLAVARRVLSDPIQRYLLADEVGLGKTIEAGLIVRQHVTENPLAHCVVIVAPGVLH 219 Query: 213 HQWLVEMLRRFNLR------FALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRL 266 QW E+ RF+L + D ++ A ++ P Sbjct: 220 RQWQQELSARFHLEELLNKSIHIIDMAAFSTADPLSFRP--------------------- 258 Query: 267 EHLCEAEWDLLVVDEAHHL-VWSEDAPSRE-YQAIEQLAEHVPGVLLLTATPEQLGMESH 324 D+LV+DEAH + W+ DA + Y ++ LA+ +LLL+ATP ++ Sbjct: 259 --------DMLVIDEAHQVGAWAWDAEYEQRYASVNYLAQQSEKLLLLSATPVTGNEKNF 310 Query: 325 FARLRLLDPNRF 336 A L LLD + Sbjct: 311 LAMLHLLDAKNY 322 >UniRef50_A1U082 Helicase domain protein n=3 Tax=Proteobacteria RepID=A1U082_MARAV Length = 1046 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 20/223 (8%) Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 +E A+ ++ + L Y + +K+++ T L + L E EGI + V H Sbjct: 516 YESLKASDTKYNQLISVLKDYWAQYPDKKIILFAFYKGTLRYLHERLSE-EGIGSLVLHG 574 Query: 537 GM---SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQR 593 GM +I + R A + +LL SE+ +EG + QF+S ++ +DLP+NP +EQR Sbjct: 575 GMDKNEVIRQFRGDAQY-------NILLSSEVAAEGVDLQFSSVLINYDLPWNPMRIEQR 627 Query: 594 IGRLDRIGQAHDIQIHV---PYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI----YDSV 646 IGR+DRIGQ D +IH+ Y + Q V R + LD F + + TI ++ Sbjct: 628 IGRIDRIGQEED-RIHIWNMIYEDTIDQRVYDRLL-DRLDIFRNAMGSMETILGDQVQAL 685 Query: 647 YNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLL 689 +L+ + +P+Q + E++ +A+LE+ D+L+ Sbjct: 686 TKELLGHKLTPEQEVERIEQTAVALEKNRQDQARLEREADQLI 728 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 89/331 (26%), Positives = 140/331 (42%), Gaps = 33/331 (9%) Query: 133 RKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILH 192 R+ S + + YS L T P+Q + +L+ADEVGLGKTIEAG+I Sbjct: 90 RRLSGKLANLIYS-LNTTNTQFFPYQFKPVLQFLDSPSNGLLIADEVGLGKTIEAGLIWT 148 Query: 193 QQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD-DERYAEAQHDAYNPFDTEQL 251 + A R+L++ P L+ +W+ E+ RF + D DE + + P L Sbjct: 149 ELRAREDARRLLVVCPAMLREKWVEELANRFGVMAQCVDADELLTKLESIKARPHQDFAL 208 Query: 252 VIC------SLDFAR-RSKQRLEHLCE---------AEWDLLVVDEAHHLVWSEDAPSRE 295 V FA+ SK L DL+++DEAH+L ++ Sbjct: 209 VASMQGLRPPRGFAQGNSKSGAAKLGRYLDGLDGDDPLLDLVIIDEAHYLRNESSQTNKL 268 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 Q + +A + ++LL+ATP QL + F L+LLD + F F + P+ D Sbjct: 269 GQLLRPVASN---LVLLSATPIQLRNKDLFNLLKLLDEDSFPYEHSFEDTLYANAPLKDL 325 Query: 356 VAMLLAGNKLSNDELNMLGE-----MIGEQ-DIEPLLQ-AANSDSEDAQSARQELVSMLM 408 +L+G + D L E M GE +E L++ +D +R EL L Sbjct: 326 REKVLSGAATTEDFEEALNEAQWRSMFGESLQLEHLIENPPTADQLKDPKSRSELADQLD 385 Query: 409 DRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 + +V+ R + V E I++P Sbjct: 386 RINPLGKVITRTLKREVN-----ENRVIRMP 411 >UniRef50_Q89W29 Blr0864 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89W29_BRAJA Length = 1073 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 90/293 (30%), Positives = 134/293 (45%), Gaps = 44/293 (15%) Query: 114 RLFAGQIDRMDRFALRYRARKYSSEQ------FRMPY-SGLRGQRTSLIPHQLNIAHDVG 166 R+ A D D FA R +++S F+ P+ +G+R L+P + + Sbjct: 67 RVGASGPDSADVFAAHLRVIRWNSSTAAERDLFQAPFRAGIRLDTYQLLPLRKAL----- 121 Query: 167 RRHAPRV--LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN 224 PRV L+AD+VGLGKT+EAG+I + LL + +++ P ++ QW E+ +F Sbjct: 122 --RLPRVNLLIADDVGLGKTVEAGLIARELLLRRRIDFIVVAAPPSMTLQWKDELQAKFG 179 Query: 225 LRFALFDDERYAEAQH---DAYNPFDTEQLVICS----LDFARRSKQR---LEHLCEAEW 274 L F + D E AE + NP+ T I S D S R E A Sbjct: 180 LSFQIVDREHLAEMRRLHGFGVNPWRTGSRFIISHRLLTDEIYISGLRDVLGEFRARA-- 237 Query: 275 DLLVVDEAHHLV---WSEDAPSREY-QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRL 330 LL++DEAHH S A S ++ +A+ ++E L L+ATP S A L + Sbjct: 238 -LLILDEAHHAAPAGGSRYAISSQFTKAVRNISERFEHRLFLSATPHNGHSNSFSALLEM 296 Query: 331 LDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIE 383 LDP RF + ++ PV M+ +L +D L LGE E+ IE Sbjct: 297 LDPQRFTRGVEV--RPRDLEPV-----MV---RRLKSD-LRRLGEAFPERRIE 338 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 18/152 (11%) Query: 488 DPRVEWLMGYLTSH-------RSQKVLVICAKAATALQLEQVLRE------REGIRAAVF 534 D RV WL+ ++ ++ ++++++ T LE+ L E R R VF Sbjct: 497 DARVRWLVEWVKANMLAGKTWNNRRLIIFTEYEDTRRWLERRLLEAIDATDRSDERILVF 556 Query: 535 HEGMSIIERDRAAAWFAEEDT--GAQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLE 591 +R+ F + ++LLC++ EG N Q + S ++ FDLP+NP LE Sbjct: 557 SGATGTDKREAVKRAFNTDPAIEPVRILLCTDAAREGINLQTYCSDLIHFDLPWNPSRLE 616 Query: 592 QRIGRLDRIGQAHDIQI--HVPYLEKTAQSVL 621 QR GR+DR Q + I + Y ++ A VL Sbjct: 617 QRNGRIDRKLQPAKLIICRYFKYEQREADIVL 648 >UniRef50_D2M8T3 Helicase domain protein n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M8T3_RHOPA Length = 956 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 15/175 (8%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQ+ + H + L+AD+VGLGKTIE G+++ R+L++VP L Q Sbjct: 161 LPHQIALVHRIINSGQTNWLIADDVGLGKTIEVGLLMAGLERKENLRRILLVVPSGLTRQ 220 Query: 215 WLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARR----------SKQ 264 W EML +F+ RF ++ + + H + ++ VI SLD A+ S Sbjct: 221 WKDEMLLKFDRRFLIYGVD-FRIFDHREWGLYER---VIISLDLAKPQSTDDNGADLSTT 276 Query: 265 RLEHLCEAEWDLLVVDEAHHLVWSEDAPSR-EYQAIEQLAEHVPGVLLLTATPEQ 318 L WD+++ DEAH L ++ S ++ + L ++LL+ TP Q Sbjct: 277 FGMLLAAGNWDIVIFDEAHRLARNDRGQSTLRFRLAQALRRKTDSLVLLSGTPHQ 331 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 4/116 (3%) Query: 494 LMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEE 553 L+ L + +KVL+ AT + +LR I + + H G + ++ RAA E+ Sbjct: 520 LIDRLVNKDGKKVLIFTEYRATQAFILYILRSVLNIESVLIHGGHTADDK-RAAVEKFED 578 Query: 554 DTGAQVLLCSEIGSEGRNFQFASHMVM-FDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 D VL+ +E G EG N H+++ +DLP+NP + QRIGRL R GQ + + Sbjct: 579 DV--PVLISTEAGGEGLNMHRNCHILINYDLPWNPSRISQRIGRLYRYGQKQRVIV 632 >UniRef50_B5IR31 Type III restriction enzyme, res subunit family n=1 Tax=Thermococcus barophilus MP RepID=B5IR31_9EURY Length = 952 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 92/191 (48%), Gaps = 10/191 (5%) Query: 151 RTSLIP--HQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVP 208 + +IP HQ ++ + RVL+ADE+GLGKTIEA I L +VLI+ P Sbjct: 35 KQKIIPFLHQADLLLHLMTVRPIRVLIADEIGLGKTIEALAIAKYLELQDGIRKVLILTP 94 Query: 209 ETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEH 268 + L QW+ E+ R + + + + + D I S+D A+R ++ Sbjct: 95 KILIEQWVSEVKRVGGMPWIVSSGSQLKNTFFKS--GVDKAYYYIMSIDLAKRYPDIIDS 152 Query: 269 LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 + WDL++VDEAH+ + R+Y + ++LL+ATP + + + RL Sbjct: 153 VG---WDLIIVDEAHN---ATLGTQRDYLLRRLTSNKHRNIILLSATPHRGDYKDYLNRL 206 Query: 329 RLLDPNRFHDF 339 R LDP ++ Sbjct: 207 RYLDPTLTENY 217 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 52/80 (65%), Gaps = 1/80 (1%) Query: 552 EEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVP 611 E++ GA++L+ +++ EG N Q A+ ++ ++ P++P LEQR+GR+ R+GQ + ++ Sbjct: 453 EQENGAKILIATDVAGEGLNLQVANVLINYEAPWSPIKLEQRMGRIWRLGQKKESYVYTV 512 Query: 612 YLE-KTAQSVLVRWYHEGLD 630 +L K + VL YH+ ++ Sbjct: 513 FLSNKMDRDVLENLYHKLMN 532 >UniRef50_A5PDD5 Putative helicase (Snf2 family) protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDD5_9SPHN Length = 992 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 84/177 (47%), Gaps = 4/177 (2%) Query: 486 NFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDR 545 F VEWL H +KV++ + T L + L E G + H G+ + +R Sbjct: 459 KFQRLVEWLRKIRQDHPDEKVIIFSSFRKTIDYLARRL-EDAGFESIELHGGIDL-DRQT 516 Query: 546 AAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG-QAH 604 FA+ G VLL SE+G EG + QF + +DLP+NP +EQRIGR+DRIG Q+ Sbjct: 517 IVNSFADAPAGT-VLLTSEVGGEGLDLQFCRILFNWDLPWNPMRVEQRIGRIDRIGQQSP 575 Query: 605 DIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 I I EKT + + +E L T I + D+ L +P+ TE Sbjct: 576 SIDIINLIAEKTIEERVYERLYERLGIIRSTLGDFEPILGEIIRDIELALVNPELTE 632 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 21/182 (11%) Query: 173 VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD 232 +L+ADEVGLGKTIEAG++ + + + R+LI+ P+ L +W E+ +FN+ + Sbjct: 76 LLIADEVGLGKTIEAGLVWTELVARFDSRRLLIVCPKPLCEKWRDELRNKFNITAHVCKA 135 Query: 233 ERYAEAQHDAYNPFDTEQLVICSLDFAR-----------RSKQRLE---HLCEAE---WD 275 ++ + D D I SL R ++ R+E +L EA+ +D Sbjct: 136 DQLLQLLKDDRVGGDGFA-AIASLPSLRPPKGWEDQDEEKTGARVELAKYLEEADDDLFD 194 Query: 276 LLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNR 335 L+V DEAHHL ++ R Q + ++A+H L L+ATP L A L+L+DP+ Sbjct: 195 LVVFDEAHHLRNTDTMNHRLGQLVCEVADH---KLFLSATPINLRANDLRALLKLIDPDT 251 Query: 336 FH 337 F Sbjct: 252 FE 253 >UniRef50_UPI0001C15F0A hypothetical protein CRC_01468 n=1 Tax=Cylindrospermopsis raciborskii CS-505 RepID=UPI0001C15F0A Length = 964 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 9/192 (4%) Query: 156 PHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQW 215 P+QL R R+L+AD+VG+GKTIEAG+I+ + L G R+ ++ P L QW Sbjct: 104 PYQLVPLLMALRLETVRLLIADDVGIGKTIEAGLIVRELLDRGEIARIAVLCPPHLCDQW 163 Query: 216 LVEMLRRFNLRFALFDD---ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEA 272 E+ +F++ + + A + + F + +I SLD+A +S++R E Sbjct: 164 QQELREKFHIDAVVVRSGTASKLERAIPNGSHIFSYYRHIIVSLDYA-KSERRKASFIEH 222 Query: 273 EWDLLVVDEAHHLVWSEDAPSRE---YQAIEQLAEHVP-GVLLLTATPEQLGMESHFARL 328 D ++VDEAH + + + + +Q I +++E +LLLTATP G+E F L Sbjct: 223 CPDFVIVDEAHTCTRASNKTTSQQQRHQLITEISEKRSRHLLLLTATPHS-GIEESFLSL 281 Query: 329 RLLDPNRFHDFA 340 L F D Sbjct: 282 LGLLKAEFADLT 293 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 1/46 (2%) Query: 558 QVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 ++L+ ++ SEG N Q S ++ +DLP+NP+ LEQR GR+DR GQ Sbjct: 551 RILVATDCLSEGINLQSHFSAVIHYDLPWNPNRLEQREGRIDRYGQ 596 >UniRef50_C3QA78 Helicase n=3 Tax=Bacteroidales RepID=C3QA78_9BACE Length = 829 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 115/484 (23%), Positives = 192/484 (39%), Gaps = 97/484 (20%) Query: 151 RTSLIPHQLNIAHDVGRRHAPRV---LLADEVGLGKTIEA----GMILHQQLLSGAAERV 203 +T L P+Q G R A R ++ADE+GLGKTI+A ++ Q +S A Sbjct: 222 KTKLYPYQKE-----GIRFAFRAGKSIIADEMGLGKTIQAIGTAELMRKHQFISSA---- 272 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDER--YAEAQHDAYNP-FDTEQLV-ICSLDFA 259 LII P +L++QW E+ R F D + E H + E+ I S + Sbjct: 273 LIICPTSLKYQWKKEIER--------FTDAKAIVVEGNHLTRKVLYGAEEFYKIVSYNSV 324 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLV-WSEDAPSREYQAIEQLAEHVPG--VLLLTATP 316 + L+ L D L++DE L W+ I + A H+ ++L+ TP Sbjct: 325 CNDIKILKSL---HTDFLIMDEVQRLKNWNTQ--------ISKAARHIESDYSVILSGTP 373 Query: 317 EQLGMESHFARLRLLDPNRFHDFAQF------------VEEQKNYRPVADAVAMLLAGNK 364 + +E ++ ++ +D + QF V KN + + + +L + Sbjct: 374 LENKLEELYSIMQFVDQFCLGPYYQFLDQTVVRSDTGKVVSYKNLNAIGEQMKNVLIRRR 433 Query: 365 LSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG 424 + L + G M + L + Q +VS L+ + +R L R Sbjct: 434 KKDVALQLPGRMD-----KVLFVPMTEQQRNMHDEYQSIVSQLVFKWTKTRFLSEKDRKR 488 Query: 425 VKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATW 484 + L + +Q + + I+ + + + + L R FE + Sbjct: 489 L------------LLMLSQMRMLCDSTYILDQKTRYDTKVEETLNILR--NVFESGDEKV 534 Query: 485 WNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERD 544 F +W +++ + AK L G+R H G+ R Sbjct: 535 VIFS---QW----------ERMTRLIAKELDVL----------GVRYEYLHGGIPSEARK 571 Query: 545 RAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 F E ++V L ++ GS G N Q AS ++ DLP+NP +LEQRI R+ RIGQ Sbjct: 572 NLTDNFTELPE-SRVFLSTDAGSTGLNLQVASILINLDLPWNPAVLEQRIARIYRIGQKK 630 Query: 605 DIQI 608 +IQ+ Sbjct: 631 NIQV 634 >UniRef50_D0W197 Helicase/SNF2 domain protein n=3 Tax=Proteobacteria RepID=D0W197_NEICI Length = 943 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 109/226 (48%), Gaps = 28/226 (12%) Query: 134 KYSSEQFRMPYSG-------LRGQRTSLIPHQLNIA-HDVGRRHAPRVLLADEVGLGKTI 185 KY + Q SG L + L PHQ++ A + VLLADEVGLGKTI Sbjct: 9 KYYAHQLLCQKSGDERLSQALFEAQVDLQPHQIDAALFALENPLREGVLLADEVGLGKTI 68 Query: 186 EAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNP 245 EAG++L QL + R+L++ P L+ QW E+ +F+L +L D+ + Q+ + Sbjct: 69 EAGLVLC-QLWAERNRRLLVVCPAALRKQWQAELREKFSLP-SLVLDKAVLKQQNLSLTD 126 Query: 246 FDTE----QLVICSLDFARRSKQRLEHLCEAE-----WDLLVVDEAHHLVWSEDAPSREY 296 F T Q+++ S +FA + C AE W+L+V DEAH L + S++ Sbjct: 127 FLTSQAGRQILVVSYEFAAK--------CAAEINATGWNLVVFDEAHKLRNVYKSGSKQP 178 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQF 342 Q + A LLL+ATP Q + + LD + F +F Sbjct: 179 QTLLN-AFAGSQKLLLSATPLQNSLMEFYGLSLFLDEHLFGSKKEF 223 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 36/52 (69%) Query: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 A++++ +E +EG N QF S ++ +DLP+NP +EQRIGR R GQ D+ + Sbjct: 493 AKIMIATESAAEGVNLQFCSLLINYDLPWNPQRIEQRIGRCHRYGQKSDVVV 544 >UniRef50_B2JBC5 Helicase domain protein n=4 Tax=Cyanobacteria RepID=B2JBC5_NOSP7 Length = 946 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 9/186 (4%) Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 ++L+AD+VG+GKTIEAG+I + L G +R+ ++ P L QW E+ +F++ + Sbjct: 123 KLLVADDVGIGKTIEAGLIARELLDRGEVKRIAVLCPPHLCDQWQQELREKFHIDAVVVR 182 Query: 232 DERYAEAQHDAYNP---FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 ++ + + N F + +I SLD+A+ ++R + DL++VDEAH Sbjct: 183 SGTASKLERNIPNNDSVFSYYRHLIVSLDYAKAERRRASFITHCP-DLVIVDEAHTCARP 241 Query: 289 EDAPSRE---YQAIEQLAE-HVPGVLLLTATPEQLGMESHFARLRLLDPNRFH-DFAQFV 343 + + +Q I ++A+ +LLLTATP ES + L LL P H + Sbjct: 242 NKTTTSQQQRHQLITEIAQKQEQHLLLLTATPHSGIEESFLSLLGLLKPEFEHFNLNSLT 301 Query: 344 EEQKNY 349 ++Q+++ Sbjct: 302 DKQRDH 307 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%) Query: 507 LVICAKAATALQLEQVLRER---EGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCS 563 +V C ATA + LR++ +G + V + E +R + +VL+ + Sbjct: 490 IVWCRYIATANYVADALRQKLQKKGSQIRVIAITGELSEDEREIRLEELKSYPQRVLVAT 549 Query: 564 EIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 + SEG N Q S ++ +DLP+NP+ LEQR GR+DR GQ Sbjct: 550 DCLSEGVNLQTHFSAVIHYDLPWNPNRLEQREGRIDRYGQT 590 >UniRef50_A9GV38 Helicase, putative n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GV38_SORC5 Length = 420 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 3/106 (2%) Query: 504 QKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCS 563 ++VLV T +E LRE G+ FH G+S D+ AA A D A+VL+ + Sbjct: 223 EQVLVFTRFRDTLSTIEAALRE-AGVEPVAFHGGLSAA--DKRAALSAFRDGRARVLVST 279 Query: 564 EIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 + G EG N +V FDLP+NP L+EQRIGRL R+GQ +++++ Sbjct: 280 DAGGEGHNLHHCHVLVNFDLPYNPMLIEQRIGRLHRMGQREEVRVY 325 Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 9/84 (10%) Query: 272 AEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLL 331 A WDL++VDEAHH+ A ++ ++ L H +L+LTATP + +E + + LL Sbjct: 16 ASWDLVIVDEAHHVKSRTTAG---FKLVDGL--HSRFLLMLTATPIETDLEELYNLVTLL 70 Query: 332 DPNRFHD----FAQFVEEQKNYRP 351 P +F AQFV+ + P Sbjct: 71 KPGQFATPAAFRAQFVDPKDPLSP 94 >UniRef50_Q2GBH2 Helicase-like protein n=6 Tax=Alphaproteobacteria RepID=Q2GBH2_NOVAD Length = 933 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 12/206 (5%) Query: 127 ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIE 186 ALR R+ + + G+ + L+P + + R R+L+AD+VG+GKTIE Sbjct: 84 ALRLSLRRGAGPFRSAAHLGVEPRAYQLVPLLMAL-----RLEVKRMLIADDVGIGKTIE 138 Query: 187 AGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD---AY 243 AGMIL + L G + ++ P L QW+ E+ ++F++ R + Sbjct: 139 AGMILREMLDRGEIDSFTVLCPPHLVDQWVGELAQKFDIDSVAVTSARARSLEQGIALGD 198 Query: 244 NPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLV-WSEDAPSREYQAIEQL 302 F + SLD+ + +R E +A ++VDEAH V SE + + +++L Sbjct: 199 TIFGVHPFTVVSLDYIKADSRR-EGFAQACPKFVIVDEAHSCVGGSEKGTQQRFSLLQRL 257 Query: 303 AE-HVPGVLLLTATPEQLGMESHFAR 327 E +LLLTATP G + +AR Sbjct: 258 VEDEARHMLLLTATPHS-GNQDAYAR 282 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 10/137 (7%) Query: 472 RIYQEFEGDNATWWNFDPRVEWLMGY---LTSHRSQKVLVICAKAATALQLEQVLREREG 528 ++ + EG N+ + + DP+ L+ LT + + ++ C ATA + + LR R Sbjct: 443 QLISKAEGLNSRFAD-DPKFRELVAQVKDLTGKKEARPVIFCRFIATAEAVGEALRSRFK 501 Query: 529 IRAAVFHEGMSIIE--RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ-FASHMVMFDLPF 585 G E R+R A ED ++L+ ++ SEG N Q + +V +DL + Sbjct: 502 SHTVEVVTGRLTPEERRERVEAL---EDHPNRILVATDCLSEGINLQSLFNAVVHYDLNW 558 Query: 586 NPDLLEQRIGRLDRIGQ 602 NP +QR GR+DR GQ Sbjct: 559 NPTRHQQRDGRVDRFGQ 575 >UniRef50_UPI0001AF5B89 SNF2 family protein n=1 Tax=Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191 RepID=UPI0001AF5B89 Length = 926 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 90/276 (32%), Positives = 135/276 (48%), Gaps = 44/276 (15%) Query: 145 SGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAE-RV 203 S L R + PHQ+ + + + P+ LLADEVGLGKTIEAG+++ + +L E RV Sbjct: 66 SSLISSRVEIEPHQIAVVRRILQDQNPKYLLADEVGLGKTIEAGLVIREHILECKREARV 125 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSK 263 L++VP+ LQ QW E++ RF L+ E N Q+ +CS Sbjct: 126 LVVVPQVLQGQWTQELVDRFALQ----------EVMSGGRN----NQIRLCS-------- 163 Query: 264 QRLEHLCEAE---WD--LLVVDEAHHL---VWSEDAPSR-EYQAIEQLAEHVPGVLLLTA 314 E LC+ E W ++V+DEAH L W D + +Y A+ L VLLL+ Sbjct: 164 --PEELCQPELIGWKPTMMVIDEAHQLARQAWVNDEDEQAQYAAMTALCHQARIVLLLSG 221 Query: 315 TPEQLGMESHF-ARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNML 373 TP G E HF A L ++P + A +E K R VA+ + + L+ + N + Sbjct: 222 TPMH-GNERHFLAMLHCINPQAWQLNAVGIE--KFMRRVAERERLGGIYSSLTPETPNGV 278 Query: 374 GEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMD 409 E + E+ L+ +D E Q AR +++S L+D Sbjct: 279 LEEVIEE-----LRQLFADDEQLQ-ARIDVLSPLVD 308 >UniRef50_C6BED0 Helicase domain protein n=5 Tax=Proteobacteria RepID=C6BED0_RALP1 Length = 949 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 16/187 (8%) Query: 154 LIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 L+P + + DV R +L+AD+VG+GKTIEA +I+ + L G R+ ++ P L Sbjct: 107 LVPLLMALKQDVVR-----LLVADDVGIGKTIEAALIVRELLDRGEISRLAVLCPPHLCE 161 Query: 214 QWLVEMLRRFNLRFALFDD------ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLE 267 QW E+ RF++ + + ER A F+ + SLD+ +S +R + Sbjct: 162 QWQRELKERFHINAVVVRNTTASRLERGLPANQSV---FEAYPFTVVSLDYI-KSDRRRD 217 Query: 268 HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVP-GVLLLTATPEQLGMESHFA 326 A + ++VDEAH +S + Y ++ LAE+ ++LLTATP ++ + Sbjct: 218 EFQRACPECVIVDEAHTCTFSGQGRQQRYTLLKGLAENPERHMVLLTATPHSGDEDAFYN 277 Query: 327 RLRLLDP 333 L LL P Sbjct: 278 LLGLLKP 284 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 18/125 (14%) Query: 488 DPRVEWLMGYL---TSHRSQKVLVICAKAATALQLEQVLREREGIRAAVF--HEGMSII- 541 DP+++ L+ +L TS R Q V V C ATA + + LR VF H+ ++ Sbjct: 465 DPKLKRLIDHLKELTSDRFQPV-VFCRYIATAHYVAEQLR-------LVFPDHQVTAVTG 516 Query: 542 ---ERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRL 597 +R AA A + ++L+ ++ SEG N Q + +V +DL +NP EQR GR+ Sbjct: 517 EFAPTEREAAVDAMGEAEQRILVATDCLSEGINLQNLFTAVVHYDLSWNPTRHEQREGRV 576 Query: 598 DRIGQ 602 DR GQ Sbjct: 577 DRFGQ 581 >UniRef50_C7RNW2 Helicase domain protein n=2 Tax=Bacteria RepID=C7RNW2_9PROT Length = 946 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 5/167 (2%) Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 R+L+AD+VG+GKTIEA +I+ + + G R+ ++ P L QW E+ +RF++ + Sbjct: 120 RLLIADDVGIGKTIEAALIVRELIDRGEISRLTVLCPPHLCEQWQRELQQRFHIHAVVVR 179 Query: 232 DERYAEAQHDA---YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 A + + F+ + SLD+ +S +R + A + ++VDEAH +S Sbjct: 180 SSTAARLERGLPANQSVFEAYPHTVVSLDYI-KSDRRRDEFQRACPECVIVDEAHTCTFS 238 Query: 289 EDAPSREYQAIEQLAEHVP-GVLLLTATPEQLGMESHFARLRLLDPN 334 + Y ++ LAE+ ++LLTATP E+ F L LL P+ Sbjct: 239 GQGRQQRYTLLKGLAENPDRHLILLTATPHSGDEEAFFNLLGLLHPS 285 Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 10/121 (8%) Query: 488 DPRVEWLMGYL---TSHRSQKVLVICAKAATALQLEQVLRE--REGIRAAVFHEGMSIIE 542 DP+++ L+ +L T+ Q V V C ATA + LR+ + + A+ E Sbjct: 463 DPKLKRLLEHLAELTAAGFQPV-VFCRYIATAHYVADALRKAHKSHLVQAITGE---FAA 518 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIG 601 +R AA A + ++L+ ++ SEG N Q + +V +DL +NP EQR GR+DR G Sbjct: 519 SEREAAVDAMGEAEKRILVATDCLSEGVNLQNLFTAVVHYDLSWNPTRHEQREGRVDRFG 578 Query: 602 Q 602 Q Sbjct: 579 Q 579 >UniRef50_C4ZN77 SNF2-related protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZN77_THASP Length = 975 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 102/202 (50%), Gaps = 14/202 (6%) Query: 154 LIPHQLNIAHDVGRRHAPR-VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQ 212 L PHQ+ A R VLLADEVGLGKTIEA +++ Q + R+L+I P +L+ Sbjct: 37 LNPHQIEAALFALRNPLQEGVLLADEVGLGKTIEAALVVC-QYWAERRRRLLVICPASLR 95 Query: 213 HQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQ------LVICSLDFARRSKQRL 266 QW E+ +F + + D + + A + T Q +VI S FA + + L Sbjct: 96 KQWAQELHDKFAVPTTVVD--AVSLRKQSAGDMLATLQRLVGKAVVIMSYQFAAKLEAEL 153 Query: 267 EHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFA 326 + WD++V+DEAH L + A +R QA+++ A LLLTATP Q + + Sbjct: 154 RAV---PWDVVVIDEAHKLRNAHRASNRTGQALKR-ALQGRKKLLLTATPLQNSLMELYG 209 Query: 327 RLRLLDPNRFHDFAQFVEEQKN 348 ++D + F D F ++ N Sbjct: 210 LSTVIDEHLFGDETAFRKQFMN 231 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 40/57 (70%) Query: 552 EEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 ++ TGA++++ +E +EG N QF + ++ +DLP+NP +EQRIGR R GQ D+ + Sbjct: 518 DDGTGAEIMIATEAAAEGVNLQFCALIINYDLPWNPQRVEQRIGRCHRYGQRFDVVV 574 >UniRef50_B4WMM9 Helicase conserved C-terminal domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMM9_9SYNE Length = 1051 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 105/240 (43%), Gaps = 25/240 (10%) Query: 144 YSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERV 203 + + +T HQ + R+L+ADEVGLGKTIEA I + A R+ Sbjct: 103 FYSMESSQTDFYAHQFKPVLKLLDSPVGRLLIADEVGLGKTIEAMYIWKELQTRADARRI 162 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVIC--SLDFARR 261 LI+ P L+ +W ++ +RFN+ FA D + + Q C SL+ R Sbjct: 163 LIVCPAMLRQKWKDDLAQRFNI-FAEIVDAKDLLGRTKLCLESQQNQSFACIASLEGLRP 221 Query: 262 S-----------KQRLEHLCEAE--------WDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 S + L L +A +DL V+DEAH+L + A + + I Sbjct: 222 SGNWEDINTKNTRAELARLLDANPANDEFGLFDLAVIDEAHYLRNAATASNLVGRLIRDA 281 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 + ++ LLLTATP Q+ + F LRL+ P+ F F +PV A+ L A Sbjct: 282 SRYL---LLLTATPVQIDNSNLFQLLRLISPDDFFSEDIFSTMLGANQPVMRALRYLWAS 338 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 1/97 (1%) Query: 556 GAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ-AHDIQIHVPYLE 614 G VLL SE+GSEG + Q +V +DLP+NP +EQRIGRLDR+ Q A I I L+ Sbjct: 596 GPSVLLSSEVGSEGIDLQHCRFLVNYDLPWNPMRVEQRIGRLDRLNQKAERISIVNFSLK 655 Query: 615 KTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI 651 T ++ ++ ++ + FE + +I + +L+ Sbjct: 656 DTVEAEILERLYKRIRIFEESVGDIESILGEMTENLM 692 >UniRef50_B1KKL5 Helicase domain protein n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KKL5_SHEWM Length = 937 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 16/198 (8%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQ+++ H + L+AD+VGLGKT+E +++ + VL+I P L Q Sbjct: 160 LPHQIHLVHHILNSGNLNWLIADDVGLGKTVETILLMSALQHRKQLKSVLLITPAGLTQQ 219 Query: 215 WLVEMLRRF-NL-RFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEA 272 W E++ + NL RF ++ + + +H + V+ S+D ++K L L ++ Sbjct: 220 WQEEIIEKAPNLPRFNVYGTDFPTKHEHHWFK----NDFVVASMD-RLKNKDHLNILLDS 274 Query: 273 -EWDLLVVDEAHHLV-----WSEDAPSREYQAIEQLAEHVPG-VLLLTATPEQLGMESHF 325 ++DL++VDEAH L + D+ R E ++ G ++LLTATP Q GM+ F Sbjct: 275 RQYDLIIVDEAHRLSRRQYGYKLDSSERFELVAELRKQNQNGNLILLTATPHQ-GMQDKF 333 Query: 326 -ARLRLLDPNRFHDFAQF 342 A L LL P R D + Sbjct: 334 IALLELLRPERKSDLLKI 351 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 76/305 (24%), Positives = 137/305 (44%), Gaps = 29/305 (9%) Query: 498 LTSHRSQKVLVICAKAATALQLEQVLREREGIRAA-VFHEGMSIIERDRAAAWFAEEDTG 556 L ++ +KVL+ +T L + L+++ G + + + GM + ER + F E+TG Sbjct: 524 LKNNPKEKVLIFTEYRSTQQYLAKTLQQKIGADSVNLIYGGMKLDERKQQIYDF--ENTG 581 Query: 557 AQVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI-HVPYLE 614 Q L+ +E G EG N Q H M+ +DLP+NP L QR+GRL R GQ + + ++ + Sbjct: 582 -QFLISTEAGGEGINLQEHCHIMINYDLPWNPMRLVQRVGRLYRYGQLKRVVVFNINSSD 640 Query: 615 KTAQSVLVRWYHEGLDAFEHTCPTGRTIY-DSVYNDLINYLAS---------PDQTEGFD 664 + VL Y + + + D++ +D++ ++S Q+E + Sbjct: 641 SLDEKVLETMYGRVEAVVKDLAQVQSSEFNDALMDDILGEVSSLIDIESILENAQSEAIE 700 Query: 665 DLIKNCREQHEALKAQLEQGRDRLLE-IHSNGGEKAQALAESIEEQDDDTNLIAFAMNLF 723 + E E K E RD I+SN + +I +Q ++ AF + Sbjct: 701 RTNQRINEAVEKAKESAELQRDLFQHAINSNDVRNDNPI--NINKQ----HVAAFISGIC 754 Query: 724 DIIGINQDDRGDNMIVL---TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE 780 +++ I + N V P + M + D I+FDR++A R + Q+I + Sbjct: 755 ELLDIEIMSKLHNDEVWQLRIPPNVMELLQTKRSRHD---ISFDRKIASTRANTQYIDVD 811 Query: 781 HPLIR 785 L++ Sbjct: 812 SYLMK 816 >UniRef50_UPI0001B4C480 helicase domain-containing protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4C480 Length = 984 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 15/175 (8%) Query: 167 RRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLR 226 R+ R+L++D+VG+GKT+EAG+I + L G A R+ ++ L QW E+ +F + Sbjct: 111 RQRTVRLLISDDVGIGKTVEAGLIAKELLAQGEATRLAVLCSPALAEQWQGELREKFGID 170 Query: 227 FALFDDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAH 283 L + + + + FD I S DF + ++ R E + DL++VDEAH Sbjct: 171 AELVLASTVSRLERNLELGQSLFDRHPFTIISTDFIKSTRHR-EDFVKHCPDLVIVDEAH 229 Query: 284 HLVWSED-APSREYQAIEQL---------AEHVPGVLLLTATPEQLGMESHFARL 328 V ++D A A QL A+ +LLLTATP G ES F L Sbjct: 230 TCVAADDPAQGGTSSATNQLRYELLRKVSADADRHLLLLTATPHS-GKESAFRNL 283 >UniRef50_B7ABD9 Helicase domain protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7ABD9_THEAQ Length = 923 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 16/211 (7%) Query: 146 GLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLI 205 G+R + L+P + + D R+L+AD+VG+GKT+EA +I + L A R+ + Sbjct: 107 GIRPRAYQLVPLLMALRLD-----PVRLLIADDVGVGKTVEAALIARELLDRKMARRLAV 161 Query: 206 IVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH---DAYNPFDTEQLVICSLDFARRS 262 + P L QW E+ +F L + A + N + Q+++ S+DF + Sbjct: 162 LAPPHLLDQWAEELKEKFALEPVVVSAGSLARLERGLGSGGNLYRGLQVMVASIDFLKHD 221 Query: 263 KQRLEHLCEAEWDLLVVDEAHHLVWSED-APSREYQAIEQLAEHVPG--VLLLTATPEQL 319 + R E DL++VDEAH V + A + Y+ + LA+ P ++LLTATP Sbjct: 222 RHR-PLFLEGAPDLVIVDEAHGAVGGPNQAMQKRYELVRALADD-PSRHLILLTATPHS- 278 Query: 320 GMESHFAR-LRLLDPN-RFHDFAQFVEEQKN 348 G+ F+R L LL P D A+ E Q++ Sbjct: 279 GIPEAFSRLLGLLSPEFATWDLARLDESQRS 309 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%) Query: 558 QVLLCSEIGSEGRNFQFA-SHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPY 612 ++L+ ++ SEG N Q S +V +DLP+NP+ LEQR GR+DR GQ + V Y Sbjct: 536 RILVATDCVSEGVNLQEGFSAVVHYDLPWNPNRLEQREGRVDRYGQKRPKVVAVRY 591 >UniRef50_Q47S04 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal n=1 Tax=Thermobifida fusca YX RepID=Q47S04_THEFY Length = 949 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 12/162 (7%) Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNL--RFAL 229 R+L+AD+VG GKT+EA +I + + G A R+ ++ P L QW E+ +F + L Sbjct: 120 RLLIADDVGTGKTVEAALIAKELVERGEARRMAVVCPPALAEQWQAELRDKFGIEAELVL 179 Query: 230 FDDERYAEAQHDA-YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 R E A + F T I S DF ++R + L DL++VDEAH W Sbjct: 180 PSTVRCLERPLRADQSVFKTYPYTIVSTDFITSEQRRAQFLTHCP-DLVIVDEAH--TWV 236 Query: 289 EDAPSREYQAIEQLAEHVPG-----VLLLTATPEQLGMESHF 325 +P+R Q ++L +V ++L+TATP G E+ F Sbjct: 237 NASPTRLRQQRQELLRNVAAQQDRHLILVTATPHS-GRENAF 277 >UniRef50_A3NZY7 HeliCase, c-terminal:dead/deah box helicase, n-terminal n=2 Tax=Burkholderia pseudomallei RepID=A3NZY7_BURP0 Length = 1043 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 103/229 (44%), Gaps = 35/229 (15%) Query: 152 TSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 T PHQ + +L+ADEVGLGKTIEAG+I + R+L++ P L Sbjct: 100 TDFYPHQYKPLLTLLDSPVNGLLIADEVGLGKTIEAGLIWTELRARYDMRRLLVVCPAML 159 Query: 212 QHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSL--------------D 257 + +W E+ RF L + D A + + + E+ I S D Sbjct: 160 REKWRFELSSRFGLDARVVD---AATLRQELGSTEHRERAWIVSYQGIRVPSEWDATESD 216 Query: 258 FARRS-KQRLEHLC------EAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVL 310 +RS + RL L E DL++ DEAH++ E R + ++ H L Sbjct: 217 KPKRSVRARLADLLYHHADQEPLLDLVIFDEAHYMRNEETGAWRTGSLLRDVSTHQ---L 273 Query: 311 LLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY----RPVADA 355 +L+ATP LG + F LRLLDP+ F ++ E+ +N RPV A Sbjct: 274 MLSATPINLGSDDLFNVLRLLDPDHF----EYPEDFRNVILANRPVIAA 318 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 3/106 (2%) Query: 497 YLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTG 556 ++ R K +V ATA L + L E + A + G ++D + F ED Sbjct: 523 FMAEDRDTKAIVFTTFRATARYLVERL-SAENVEAGLLMGGAEF-DKDAVVSAF-REDRN 579 Query: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 +VL+C+++ +EG + QF +V +DLP+NP +EQRIGR+DRIGQ Sbjct: 580 CRVLVCTDVAAEGVDLQFCRLVVNYDLPWNPMRIEQRIGRIDRIGQ 625 >UniRef50_B4V8K7 Helicase domain containing protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4V8K7_9ACTO Length = 976 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 11/171 (6%) Query: 167 RRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLR 226 R+ R+L++D+VG+GKT+EAG+I + L G A + ++ L QW E+ +F + Sbjct: 109 RQQTVRMLISDDVGIGKTVEAGLIASELLAQGEATGLAVLCSPALAEQWQQELRTKFGID 168 Query: 227 FALFDDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAH 283 L + + + FD VI S DF + + R + + DL++VDEAH Sbjct: 169 AELVLSSTVSRLERGLDLGQSLFDRYPHVIVSTDFIKSPRHRDDFVRHCP-DLVIVDEAH 227 Query: 284 HLVWSEDAPSR-----EYQAIEQLAEHVP-GVLLLTATPEQLGMESHFARL 328 V +ED S Y+ + ++AE ++L+TATP G ES F L Sbjct: 228 TCVAAEDTASGAQNQLRYELLRRVAEDTERHLVLVTATPHS-GKESAFRNL 277 >UniRef50_Q47ZX3 SNF2 family protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZX3_COLP3 Length = 1024 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 48/291 (16%) Query: 157 HQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAER-VLIIVPETLQHQW 215 HQL++ V + + LL DEVGLGKTIEAG ++ + +L + VLI+ P +L QW Sbjct: 168 HQLSVVLQVLNDNVQKYLLGDEVGLGKTIEAGFLVREHILEYTDKACVLILTPPSLVQQW 227 Query: 216 LVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWD 275 EM ++F+L + D++ E Q F Q ++ S ++ Sbjct: 228 RGEMSQKFHLE-DVMDEDLDEEDQKVFIGSF---QDILTSKFITKKPT------------ 271 Query: 276 LLVVDEAHHL---VWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLD 332 ++V+DE H L W +D + I + ++L+ TP ++ A L L+ Sbjct: 272 MVVIDEGHQLGSFAWGDDNKGV-FSQIASACHNSISTIVLSGTPITGNTKNFLAMLHCLN 330 Query: 333 PNRFH-------DFAQFVEEQKNYRPVADAVA-----MLLAG-------NKLSNDELNML 373 P+ + F +EE++ Y + A+ L G +DELN L Sbjct: 331 PDSYQLNDDGISSFNNKIEEREKYSGIYGALVPESDDFTLEGIVEQVESFDFKDDELNFL 390 Query: 374 GEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLF-RNTRN 423 +++P + + + ++ Q R+ V L D G LF R RN Sbjct: 391 -----IANLKPHIDYFSEEKDENQ--RKLAVKALQDYFGDKYRLFQRFIRN 434 >UniRef50_UPI0001926BDB PREDICTED: similar to Zinc finger, RAN-binding domain containing 3 n=1 Tax=Hydra magnipapillata RepID=UPI0001926BDB Length = 576 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 103/474 (21%), Positives = 188/474 (39%), Gaps = 67/474 (14%) Query: 166 GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAER--VLIIVPETLQHQWLVEMLRRF 223 G + RVL+ DE+GLGKT++A I + E+ +LII P +L++ W+ E+ Sbjct: 32 GIKMKGRVLIGDEMGLGKTLQAIAIAYY-----FYEKWPLLIIAPSSLRYNWVNELEDW- 85 Query: 224 NLRFALFDDERYAEAQHDAYNPFDTEQLVIC----SLDFARRSKQRLEHLCEAEWDLLVV 279 L F L D + D F + +I S+ + ++ + + + ++ + +++V Sbjct: 86 -LPFLLPGDINMIRSFADLSQMFVAKVTIISYGLISISHSHKNAKVSDLIAKSNFGVVIV 144 Query: 280 DEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDF 339 DE+H L + + + I + +P V+LL+ TP E + +L LL P +F++F Sbjct: 145 DESHFL---KSMKTVRTKVILNSLKRIPHVILLSGTPSLSRPEELYPQLHLLHPTKFNNF 201 Query: 340 AQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSA 399 F G + + G Q NS S Sbjct: 202 HDF-------------------GERFCGGYFETVRGRGG--------QIFNSFQTRGASN 234 Query: 400 RQELVSMLMDRHGTSRVLFRNTRNGV-KGFPKRELHTIKLPLP--TQYQTAI-----KVS 451 ++L +L + V+ R +N V P + I +P +Y+ +I ++ Sbjct: 235 LEDLNRLLRN------VMIRRLKNEVLTELPSKRRSKIFFEIPESNKYKKSIDEQFKQIR 288 Query: 452 GIMGARKSAED----RARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVL 507 ++ K++ED A D P + + D A V+ + L K L Sbjct: 289 KVLKQLKNSEDGFFLSAFDYNQP---FNQLFCDTALAK--AGAVQKYICDLIDGMPNKFL 343 Query: 508 VICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGS 567 V C +++ L +++ ++ + ++R F +L + S Sbjct: 344 VFCFHMTMVQAIQETLVQKK-VKYICITGSVPPVQRGHLVETFQSNKEYRVAILSIQAAS 402 Query: 568 EGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVL 621 G A H+V +L P +L Q R RIGQ + +QIH + T +L Sbjct: 403 TGLTLTAADHVVFAELHHTPGVLLQAEDRCHRIGQKNAVQIHYLLAQGTIDDIL 456 >UniRef50_Q1IY45 Helicase-like protein n=3 Tax=Deinococci RepID=Q1IY45_DEIGD Length = 933 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 15/189 (7%) Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN------L 225 R+L+AD+VG+GKT+EA +I + L G R+ ++ P L QW E+ +F L Sbjct: 116 RLLIADDVGIGKTVEAALIARELLDRGEIGRLAVLCPPHLAEQWQAELRSKFGIDATPVL 175 Query: 226 RFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHL 285 + ER + F + VI SLDF + + R + L +A +L++VDEAH Sbjct: 176 PTTVKRLERQCRVGESIFERF---KHVIVSLDFVKTDRWRDDFLRKAP-ELVIVDEAHTC 231 Query: 286 VWSEDAPSREYQAIEQL----AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQ 341 + S+ +Q L A+ ++L+TATP ++ + L+LL+P F Sbjct: 232 AEGSEGRSKRHQRYRLLEGLAADPERNLILVTATPHSGKEDAFRSLLKLLNPE-FASLPL 290 Query: 342 FVEEQKNYR 350 + Q+N R Sbjct: 291 DLSGQQNER 299 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 23/273 (8%) Query: 507 LVICAKAATALQLEQVLRER-EGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEI 565 +V C ATA + Q LR +G+ +S ER+ A A + ++L+ ++ Sbjct: 481 IVFCRFIATAEYVAQALRSGLDGVEVRAVTGRLSPEEREAVVADLATAER--RILVATDC 538 Query: 566 GSEGRNFQFA-SHMVMFDLPFNPDLLEQRIGRLDRIGQ-AHDIQIHVPY-----LEKTAQ 618 SEG N Q S ++ +DLP+NP LEQR GR+DR GQ + +++ Y +++ Sbjct: 539 LSEGINLQQDFSAVIHYDLPWNPTRLEQREGRVDRYGQPSKAVKVVTLYGADNRIDRIIL 598 Query: 619 SVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQH---- 674 VLVR + + P + ++V + + + + E + E H Sbjct: 599 EVLVRKHRTIRGTLGLSVPAPDEV-ENVLDLVFQKVLLGENRESMMTPLFELPESHDLEL 657 Query: 675 ---EALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQD 731 EA ++ + R R + N E AQ LA + D + F ++ + G+ Sbjct: 658 RWQEAANREM-RSRSRFAQRSINPEEVAQELAATRAALGDTLAVERFVLDTLKLAGVTVT 716 Query: 732 DRGDNMIVLTPSDHMLVPDFPGLSEDGITITFD 764 R + P +P+ L +G+ + FD Sbjct: 717 ARNGRYEIERPG----LPELRDLFGNGLRVRFD 745 >UniRef50_Q7XQJ0 OSJNBa0005N02.1 protein n=6 Tax=Magnoliophyta RepID=Q7XQJ0_ORYSJ Length = 863 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 120/520 (23%), Positives = 209/520 (40%), Gaps = 87/520 (16%) Query: 154 LIPHQL---NIAHDVGRRHAPRVLLADEVGLGKTIEA--GMILHQQLLSGAAERVLIIVP 208 L P+QL N + R++ +LADE+GLGKT++A + L + L + LI+ P Sbjct: 313 LKPYQLVGVNFLLLLHRKNIGGAILADEMGLGKTVQAVTYLTLLRHLYNDPGPH-LIVCP 371 Query: 209 ETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYN-------------PFDTEQLVICS 255 ++ W E L+++ F++ + A AY+ PF+ L++C Sbjct: 372 ASVLENWERE-LKKWCPSFSII---MFHGAGRTAYSKELSSLGKAGYPPPFNV--LLVCY 425 Query: 256 LDFARRSKQRLEH---LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLL 312 F RRS Q+ + L W +++DEAH L +D S ++ + +A+H L+L Sbjct: 426 SLFERRSAQQKDDRKALKRWRWSCVLMDEAHVL---KDKGSFRWRNLMAVAQHARQRLML 482 Query: 313 TATPEQLGMESHFARLRLLDPNRFH----DFAQFVEEQKNYRPVADAVAMLLAGNKLSND 368 T TP Q + ++ L + P+ F D + + + + + + +L L Sbjct: 483 TGTPLQNDLHELWSLLEFMMPDIFATGDIDLKKLLNAEDH--ELISRIKSILGPFILRRL 540 Query: 369 ELNMLGEMIGEQDIEPLLQAAN---SDSEDAQS---ARQELVSMLMDRHGTSRVLFRNTR 422 + +++ +++ P +Q N DSE Q+ A E R S F N Sbjct: 541 KSDVMQQLV------PKIQHVNFVTMDSEQFQAYNYAIDEYRGACQARSAKSTSNFSN-- 592 Query: 423 NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE----------- 471 N V PKR++ + + + I + DR +LYP+ Sbjct: 593 NVVGLIPKRQISNYFMQFRKIANHPLLIRRIYSDKDV--DRIAKLLYPKGAFGFECSLER 650 Query: 472 -----RIYQEFE--------GDNATWWNF-------DPRVEWLMGYLTS--HRSQKVLVI 509 R Y +F GD+ T + + L L S + +VL+ Sbjct: 651 ATQELRKYNDFAIHQLLVSYGDSGTKGALTDEHVLGSAKCQALAELLPSLANDGHRVLIF 710 Query: 510 CAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEG 569 ++ T L + + E G+ G + ER F + + LL + G +G Sbjct: 711 -SQWTTMLDILEWTLEVIGVTYRRLDGGTPVTERQTIVDTFNNDRSIFACLLSTRAGGQG 769 Query: 570 RNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 N A +++ D+ FNP + Q R RIGQ + I+ Sbjct: 770 LNLIGADTVIIHDMDFNPQMDRQAEDRCHRIGQQKPVTIY 809 >UniRef50_B8P3F9 Predicted protein (Fragment) n=4 Tax=Agaricomycetes RepID=B8P3F9_POSPM Length = 813 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 111/479 (23%), Positives = 188/479 (39%), Gaps = 92/479 (19%) Query: 173 VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLR----------- 221 +LADE+GLGKT + L G+ LI+VP + WL E R Sbjct: 326 CILADEMGLGKTCQVISFLAHLKEQGSQGPHLIVVPSSTLENWLREFDRFAPSISVTSYY 385 Query: 222 -----RFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL 276 R LR L D +R Q D + +++I + + A+ + + +WD+ Sbjct: 386 AGKEERVELRQTLLDTQR--SRQEDGW------EVLITTYNLAQGDDKDRKFFRRIQWDV 437 Query: 277 LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 V DE H L ++ S+ YQ + L LLLT TP Q ++ L + Sbjct: 438 SVFDEGHVL---KNFQSQRYQTL--LRYESKWRLLLTGTPLQNNLQELVVLKDLPKKSER 492 Query: 337 HDFAQFVEEQK---------NYRPVADAVAMLLA-GNKLSNDELNMLGEMIGEQDIEPLL 386 ++ + QK + + + DA A A G ++N + G G+Q + L Sbjct: 493 IEWCEMTPLQKTIYNETLQRSRKTIFDAEAEAQATGETIANGKAPKKGRANGKQKDKVYL 552 Query: 387 QAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT-----------RNGVKGFPKRELHT 435 + +++ D + A ML R T L T R V F K ++ Sbjct: 553 ENSSNVLMDLRKAASH--PMLFRRRFTDDTLASITKLLLKEPDFKRRGAVFRFVKEDMEV 610 Query: 436 -----IKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPR 490 ++L T+Y L P+ Y + + Sbjct: 611 MTDAELQLFCATKY-----------------------LQPDDCYLQA-----------GK 636 Query: 491 VEWLMGYLTSHRSQ-KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAW 549 V+ L+ L + ++ + ++I ++ L + Q + E+EGIR ++ + R Sbjct: 637 VKVLLQLLERYHAEGRRVLIFSQFTQILDILQKVLEKEGIRFSLLTGATPVDARQSLVDE 696 Query: 550 FAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 F ++++ + LL ++ G G N AS ++MFD FNP +Q R RIGQ D+ + Sbjct: 697 FTDDESISVFLLSTKAGGMGINLTAASVVIMFDQDFNPHNDKQAQDRAYRIGQKQDVDV 755 >UniRef50_D1WRW2 Helicase domain protein n=2 Tax=Streptomyces RepID=D1WRW2_9ACTO Length = 973 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 10/170 (5%) Query: 167 RRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLR 226 R+ R+L++D+VG+GKT+EAG+I + L G A + ++ L QW E+ +F + Sbjct: 111 RQQTVRMLISDDVGIGKTVEAGLIAKELLTQGEARGLAVLCSPALAEQWQEELRTKFGID 170 Query: 227 FALF---DDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAH 283 L R + FD VI S DF + ++ R + + DL++VDEAH Sbjct: 171 AELVLASTVSRLERGLDFGQSLFDRYPHVIISTDFIKSTRHRDDFVRHCP-DLVIVDEAH 229 Query: 284 HLVWSEDAPSRE----YQAIEQLAEHVP-GVLLLTATPEQLGMESHFARL 328 V +D S + Y+ + ++AE +LL+TATP G ES F L Sbjct: 230 TCVAVDDTVSTQNQLRYELLRRIAEDPQRHLLLVTATPHS-GKESGFRNL 278 >UniRef50_A5UQI3 Helicase domain protein n=5 Tax=Bacteria RepID=A5UQI3_ROSS1 Length = 986 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 19/181 (10%) Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 R+L+AD+VG+GKTIEA +I + G R+ +I P L QW E+ +F L + Sbjct: 117 RLLIADDVGIGKTIEAALIARELFDRGEIARMAVICPPHLCDQWQRELQHKFALEATVVR 176 Query: 232 -------DERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHH 284 + R + F I S+D+ + ++R + A +L++VDEAH Sbjct: 177 ASTAAALERRLPRGDVSIWEHF---PFTIVSIDYVKNERRR-DSFLRAAPELIIVDEAHA 232 Query: 285 LVWSED-APSREYQAIEQLAEHVP-GVLLLTATPEQLGMESHFARL-RLLDPNRFHDFAQ 341 + D A + Y + LA ++LLTATP G+E FARL L+DP +FA Sbjct: 233 AIGMGDGAQQQRYALVRDLAARSDRHLILLTATPHS-GVEHAFARLIGLIDP----EFAA 287 Query: 342 F 342 F Sbjct: 288 F 288 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%) Query: 553 EDTGAQVLLCSEIGSEGRNFQFA-SHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 E + ++L+ ++ SEG N Q + +V +DLP+NP+ LEQR GR+DR GQ Sbjct: 554 ERSPRRILVATDCLSEGINLQHSFDAVVHYDLPWNPNRLEQREGRVDRYGQ 604 >UniRef50_A7HFJ5 Non-specific serine/threonine protein kinase n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HFJ5_ANADF Length = 1002 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 21/202 (10%) Query: 149 GQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVP 208 G R L P+Q+ + R R LLADE+GLGKT +A + Q + G R LI+ P Sbjct: 311 GLRMKLYPYQVEGVAFLASRG--RALLADEMGLGKTAQAIAAMAQLVRRGDVRRTLIVCP 368 Query: 209 ETLQHQWLVEMLRRFN----LRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQ 264 +L+HQW+ E LR+F + + R EA+ Y + +++ S + AR ++ Sbjct: 369 TSLKHQWVRE-LRQFTTLEPVDIGVVAGAR--EARRAIYA--EARPVLVTSYELARADER 423 Query: 265 RLEHLCEAEWDLLVVDEAHHLV-WSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMES 323 L L DLL++DEA + W +R ++ L +LT TP + ++ Sbjct: 424 ELSDLAP---DLLILDEAQRIKNWR----TRTASVVKGLRSRF--AFVLTGTPLENRLDD 474 Query: 324 HFARLRLLDPNRFHDFAQFVEE 345 ++ ++++DP F +F EE Sbjct: 475 LYSLMQVVDPRIFGPLWRFNEE 496 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Query: 523 LREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFD 582 L ER G+ H G+ R F +D +V L ++ G G N Q ASH+V D Sbjct: 643 LCERLGVGHVRLHGGVPSAARGALIDRF-RDDPECRVFLSTDAGGVGLNLQAASHVVNLD 701 Query: 583 LPFNPDLLEQRIGRLDRIGQAHDIQI 608 LP+NP +L QRI R+ R+GQ + + Sbjct: 702 LPWNPAVLAQRIARVHRLGQREAVNV 727 >UniRef50_UPI00016C3DA1 helicase, Snf2 family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3DA1 Length = 763 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 98/448 (21%), Positives = 189/448 (42%), Gaps = 71/448 (15%) Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 R +L D++GLGKT++ + R L++ P ++++QW E +R+F R Sbjct: 233 RSILGDDMGLGKTVQTLAAVELLARERGIRRALVVAPASVKYQWETE-IRKFTARPVQVI 291 Query: 232 D-------ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHH 284 + ++YAE + + EQ+V + E + + D++V+DEA Sbjct: 292 EGGPGVRLDQYAEPTF--FRLVNYEQVV-----------RDREAINAWKPDVIVLDEAQR 338 Query: 285 LVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVE 344 + E SRE + + ++LT TP + +E + QFV+ Sbjct: 339 IKNWEAKTSREVKKLRSRY-----AIVLTGTPLENRLEE------------LYSIVQFVD 381 Query: 345 EQKNYRPVADAVAMLLAGNKLSNDELNMLG----EMIGEQDIEPLLQAANSDSEDAQSAR 400 E++ + P + L +++ ++ N+ G + I E+ + P+ + R Sbjct: 382 ERR-FGPAFE----FLHEHRVLDENGNLKGYRNLDKIREK-LAPIF---------LRRTR 426 Query: 401 QELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSA 460 E+++ L R T +F + +G + + T+ L Y T + I+ + + Sbjct: 427 GEVLTQLPAR--TDNTVFVELADEQRGPYEEQRVTLARLLQKNYLTDLDRKRILASLVNL 484 Query: 461 EDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLE 520 + ++ D E + ++ H K++V A++ Sbjct: 485 RTICDSLFL-------YDKQTRVSPKLDEFAELVPELVSDH---KLVVFSQWETMAMEAA 534 Query: 521 QVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVM 580 +VL +R G+ + H G+ ER F + D +V L ++ G G N Q A +V Sbjct: 535 KVL-DRLGVGYVLLHGGLPGKERKAVLERF-QADAACKVFLSTDAGGTGLNLQMADTVVN 592 Query: 581 FDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 +LP+NP +LEQRI R+ R+GQ +++ Sbjct: 593 LELPWNPAVLEQRIARVHRMGQNRPVRV 620 >UniRef50_Q1QNM1 Helicase-like n=8 Tax=Bacteria RepID=Q1QNM1_NITHX Length = 928 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 22/214 (10%) Query: 172 RVLLADEVGLGKTIE-AGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 R+LLADEVG+GKT+ AG L LL VLI+ P TL QW +E+ R N+ A++ Sbjct: 264 RLLLADEVGVGKTLSLAGAALVSALLGDGP--VLILCPATLTTQWQIELKDRLNIPSAVW 321 Query: 231 DDERYAEAQHDAYNPFDT----------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVD 280 A P + Q+ I S + + +HL + ++++D Sbjct: 322 LSTEKAWRLDPDEIPMPSIGAAGVVKCPRQIAIVSTGLIFHNTEERKHLMSRSFGMVILD 381 Query: 281 EAHHLVWSEDAPSREYQA------IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN 334 EAH ED +E A + ++A+ VLL TATP Q +E + L++L Sbjct: 382 EAHRARGKEDPEEKERTANNLLSFMFEIAKRARHVLLGTATPIQTDVEDMWDLLKILGMG 441 Query: 335 RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSND 368 H + ++R AV ++ NK++++ Sbjct: 442 AEHVIG---DAWSDWRSTEKAVPIITGKNKVTSE 472 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 30/48 (62%) Query: 558 QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD 605 ++++ ++ EG N Q ++ DLP+NP LEQRIGR+ R GQ D Sbjct: 763 RLIVATDAACEGLNLQTLGTLINVDLPWNPSRLEQRIGRIKRFGQRRD 810 >UniRef50_D0MQ92 DNA repair and recombination protein RAD54 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MQ92_PHYIN Length = 1076 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 115/485 (23%), Positives = 194/485 (40%), Gaps = 83/485 (17%) Query: 173 VLLADEVGLGKTIEAGMILHQQLLSG-----AAERVLIIVPETLQHQWLVEMLRRFNLR- 226 +LAD++GLGKT+++ +++ LL+G R +++ P +L W E+++ + R Sbjct: 207 CILADDMGLGKTLQSITLMYTLLLTGMDMKPTVNRAIVVCPTSLVKNWDDEIIKWLHGRV 266 Query: 227 --FALFDDER---------YAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWD 275 ALF+ +R + E F + L+I S + R Q+ A D Sbjct: 267 KTVALFEAKRETVIKGINQFIEGSKRPRPGFSAQVLII-SYETFRMHAQKFADT-PACCD 324 Query: 276 LLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNR 335 LL+ DEAH L ++A S+ +A+ LA +LL+ TP Q +E FA + +PN Sbjct: 325 LLICDEAHRL---KNANSQINKALSSLA--CRKRVLLSGTPMQNDLEEFFAMVDFTNPNI 379 Query: 336 FHDFAQFVEEQKNY----------------RPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 ++F +KNY R VA + + +L ++ N + G ++ Sbjct: 380 LGTPSEF---RKNYLGPILIGREPDSTDRERQVAQSCSAMLC--EIVNQFILRRGNILNA 434 Query: 380 QDIEP-LLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRN---GVKGFPK----- 430 + + P L+Q Q +L + + ++ R++ N + K Sbjct: 435 KHLPPKLMQVICCPLSPLQ---DKLYNHFLSSSACRDMMKRSSANVLSSITALKKLCNHP 491 Query: 431 ----RELHTIKLPLP-----TQYQTAIKVSGIMGARKS---AEDRARDMLYPERIYQEFE 478 E+ LP QY TA K S G S YPE + Sbjct: 492 LLIFDEMGKTNTKLPGFSNCAQYFTAAKSSKEGGGGDSRHRRGGFGGRTCYPEWSGKMLL 551 Query: 479 GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 D R+ + M T+ R +VI + L + L + + Sbjct: 552 LD---------RLMFSMRKTTTDR----IVIVSNYTQTLDVVSTLCQERHLPFVRLDGTT 598 Query: 539 SIIERDRAAAWFAEEDTGA-QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL 597 S +R + F E T + +LL S+ G G N A+ +V+FD +NP +Q R+ Sbjct: 599 SAKKRKKLVDTFNEPTTNSFALLLSSKAGGCGLNLIGANRLVLFDPDWNPATDKQAAARV 658 Query: 598 DRIGQ 602 R GQ Sbjct: 659 WREGQ 663 >UniRef50_A1SC22 Helicase domain protein n=3 Tax=Actinomycetales RepID=A1SC22_NOCSJ Length = 953 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 10/170 (5%) Query: 167 RRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLR 226 R+ R+L+AD+VG+GKTIEAG+I + L G R+ ++ L QW E+ +F + Sbjct: 114 RQETVRLLIADDVGIGKTIEAGLIAAELLAQGTVRRLAVLCSPALAEQWQRELATKFGID 173 Query: 227 FALF---DDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAH 283 AL +R + FD VI S DF + +++R + L +L++VDEAH Sbjct: 174 AALVLTSTVKRLERGLMLNESLFDRYPHVIVSTDFIKSARRRHDFLLRCP-ELVIVDEAH 232 Query: 284 HLVWSEDAPSRE----YQAIEQLAEHVPGVLLL-TATPEQLGMESHFARL 328 + V R Y+ + LA L++ TATP G E+ F L Sbjct: 233 NCVAGAGVGHRSRHQRYELLRDLAADATRHLVMATATPHS-GDEAAFTNL 281 >UniRef50_A9T545 SNF2 family chromodomain-helicase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T545_PHYPA Length = 1791 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 23/194 (11%) Query: 173 VLLADEVGLGKTIEAGMILH----QQLLSGAAERVLIIVP-ETLQH-QWLVEMLRRFN-L 225 +LADE+GLGKTI++ +L ++ L G L+IVP TL H Q +E L N + Sbjct: 746 CVLADEMGLGKTIQSVAMLETLRCKRNLRGP---FLVIVPVSTLGHWQREIESLTDMNCI 802 Query: 226 RFALFDDERYAEAQHDAYNPFDTEQL----VICSLDFARRSKQRLEHLCEAEWDLLVVDE 281 ++ D+R Q++ +++ L ++ S + R + +L + W ++VDE Sbjct: 803 VYSGTQDDRDIIRQYEFNFASNSKALKFNVLLTSFEMLMRDQNKL---AKETWQYIIVDE 859 Query: 282 AHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQ 341 AH L + S+ QA+ QL G+LLLT TP Q + F+ L LLDP +F+ Sbjct: 860 AHRL---KSRVSKTTQALRQLKVRKGGLLLLTGTPVQNNTKEIFSLLNLLDPEKFNSEED 916 Query: 342 FVEEQKNYRPVADA 355 F+E+ Y + DA Sbjct: 917 FLEK---YGEIEDA 927 >UniRef50_A5UWB2 Helicase domain protein n=7 Tax=Bacteria RepID=A5UWB2_ROSS1 Length = 969 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 17/178 (9%) Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 R+ +AD+VG+GKTIEA ++ + L G R ++ P L QW E+ +FNL + Sbjct: 123 RLFIADDVGVGKTIEALLVARELLDRGEIGRFCVLCPPALCEQWSKELAEKFNLDAVIVR 182 Query: 232 D------ERYAEAQHDAYNPFDTEQLVICSLDFAR--RSKQRLEHLCEAEWDLLVVDEAH 283 ER Y F + + S+DF + R++ + C DL++VDEAH Sbjct: 183 SGTVSQLERQVPPGATIYESFPVQ---VISIDFVKTERNRHQFLQFCP---DLVIVDEAH 236 Query: 284 HLVWSEDAPSREYQAIEQLAEHVP--GVLLLTATPEQLGMESHFARLRLLDPNRFHDF 339 ++ +E A+ Q P ++LLTATP G+E F L L F D+ Sbjct: 237 GAAAAQGRGQQERHALVQDVARKPRRHLILLTATPHS-GIEEAFRSLLGLVRPEFADW 293 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 7/100 (7%) Query: 507 LVICAKAATALQL-EQVLRE-REGIRAAVFHEGMSIIERDRAAAWFAEEDTG-AQVLLCS 563 ++ C ATA + +QV R+ +G++ A M ER A AE D +VL+ + Sbjct: 484 ILWCRYVATAEYVADQVQRDLPDGVQVACVTGRMGDEERQ---ARIAELDADRPRVLVAT 540 Query: 564 EIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 + SEG N Q + +V +DLP+NP+ LEQR GR+DR GQ Sbjct: 541 DCLSEGVNLQSLFTAVVHYDLPWNPNRLEQREGRVDRYGQ 580 >UniRef50_A1UQF9 Helicase domain protein n=3 Tax=Actinomycetales RepID=A1UQF9_MYCSK Length = 1069 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 82/170 (48%), Gaps = 13/170 (7%) Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 R LLADE G GKTI AG+ L + G +R +I+ P L +W+ + R Sbjct: 119 RFLLADEPGTGKTIMAGLYLREMQRLGLVKRAVIVCPANLASKWVDDFSRLLGGGLRQIT 178 Query: 232 DERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLC--EAEWDLLVVDEAHHLVWSE 289 A + DA N D L + SL+ A + + L +A WDL+V DEAH L Sbjct: 179 S---ATVREDALNSND---LWVVSLELAAVNPAVQDALRPDKAGWDLVVFDEAHRLT--- 229 Query: 290 DAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR-LRLLDPNRFHD 338 + +Q LA++ P LL+TATP + G E F L L+DP + D Sbjct: 230 PTAAGFHQVGRLLAKNTPRALLMTATPHR-GKEWLFRHLLHLVDPAIYPD 278 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 2/83 (2%) Query: 527 EGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFN 586 EG A ++ S +RD F D Q+++ ++ G+EG + Q A +V +D+P++ Sbjct: 485 EGYTAQMYSGRQSKPDRDEVRKAFMRGDF--QIIVTTDAGNEGIDLQAAHVLVNYDIPWS 542 Query: 587 PDLLEQRIGRLDRIGQAHDIQIH 609 LEQR+GR+ R+GQ ++ ++ Sbjct: 543 LVRLEQRMGRIHRVGQQREVHLY 565 >UniRef50_Q5VNP2 Os01g0636700 protein n=7 Tax=Magnoliophyta RepID=Q5VNP2_ORYSJ Length = 469 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 21/214 (9%) Query: 152 TSLIPHQLNIAHDVGRRHAPRV---LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVP 208 +SL PHQ + + R H + +LAD++GLGKT +A L S +RVLI+ P Sbjct: 204 SSLFPHQKDGLEWLWRLHCEKSGGGILADDMGLGKTRQASAFLAGLFYSDLTQRVLIVAP 263 Query: 209 ETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTE-QLVICSLDFARRSKQRLE 267 T+ HQW+ E L + L A+ +HD+ E +++ + D R + L Sbjct: 264 GTILHQWIAE-LTKVGFNEDLIHSFWCAKTRHDSLAQVLKEGGVLLITYDLVRLYNEELN 322 Query: 268 HLCEA---------EWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 + WD +++DE H L ++ ++ A++ L+ ++LT TP Q Sbjct: 323 GMSSKSSKMRRACPSWDYVILDEGHVL---KNPNTKNAAALKSLSR--GQTVVLTGTPVQ 377 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPV 352 + + + L P A F E+ +P+ Sbjct: 378 NNLSEFHSLMSLCCPTVLGSLAAF--ERDFCKPI 409 >UniRef50_B2JC66 SNF2-related protein n=1 Tax=Burkholderia phymatum STM815 RepID=B2JC66_BURP8 Length = 990 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 94/214 (43%), Gaps = 26/214 (12%) Query: 126 FALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTI 185 L +A + S E+ G G PHQL V R LLADEVGLGKT+ Sbjct: 8 LCLGVQALRRSVERQIAGLGGATGVAAMSYPHQLANVQRVLTDSRIRHLLADEVGLGKTV 67 Query: 186 EAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN---LRFALFDDERYAEAQHDA 242 +A M+L+ + R LI+VPE L QWL+E R + L A DE + Sbjct: 68 QALMVLNALRIQNPKHRALILVPENLAPQWLLECQSRAHFVPLDHAPPRDETGTHVRIAY 127 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 Y EQL + + + A +DLL+VDE H L S Q I ++ Sbjct: 128 Y-----EQL------------RSVTEIDPAVYDLLIVDEIHRL------QSDARQRIAEV 164 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 A +LLL+ATP ++ L +L+P R Sbjct: 165 AGDFRQLLLLSATPRLEDAQAFRQLLTILEPARI 198 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 32/47 (68%) Query: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 AQ+L+ +++ G N Q A ++ F +P++P +EQ IGRLDR+G A Sbjct: 445 AQLLIAADLAQVGLNLQHARKLIFFSIPWSPIAVEQWIGRLDRLGSA 491 >UniRef50_C0FX26 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FX26_9FIRM Length = 862 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 105/194 (54%), Gaps = 18/194 (9%) Query: 174 LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPET-LQHQWLVEMLRRF-NLRFALFD 231 +L DE G+GK+ EA ++++Q+ L G + R+L+++P L HQW EML RF + + + Sbjct: 56 VLCDEAGMGKSHEAMLVINQKWLEGYS-RILLVIPNADLLHQW-TEMLERFYTVPYVVLT 113 Query: 232 --DERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHL--VW 287 D+ D N F + +VI + DFA +++ + + WDL V +EA+ L V+ Sbjct: 114 NRDQWRQNTSEDNSNAFIQDAIVITTYDFAADNEEAAKVV---NWDLTVFEEANALSPVY 170 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLD----PNRFHDFAQFV 343 ED +++ +A++++A LLLT TP + + + + +D P A+++ Sbjct: 171 RED--NKQAKALKRIAGD-SFKLLLTGTPIEKNIMDLYGLIWFIDETLLPGEKEFLARYL 227 Query: 344 EEQKNYRPVADAVA 357 +NY +++ V+ Sbjct: 228 RRPENYPELSEQVS 241 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 10/112 (8%) Query: 504 QKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCS 563 QK ++ T L+ +L +R A S+I + F E+ +VL+ + Sbjct: 377 QKAVIFTESVETQKMLQNLLSDRYRTLAYNGSADYSVIRQ------FKED---GEVLIST 427 Query: 564 EIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEK 615 + G++G N + A+ ++ +DLP+N LEQRI R R+GQ +D+ + V +++K Sbjct: 428 DNGAKGFNLEEAAFIIHYDLPYNTLKLEQRIDRCHRLGQENDV-LSVAFIDK 478 >UniRef50_Q9FF11 Similarity to HepA-related protein Harp n=5 Tax=Magnoliophyta RepID=Q9FF11_ARATH Length = 1178 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/173 (34%), Positives = 87/173 (50%), Gaps = 25/173 (14%) Query: 153 SLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQ 212 +L+P QL+ G R R +ADE+GLGKT++A I + G+ +L++ P L+ Sbjct: 203 ALLPFQLD-GLRFGLRRGGRCFIADEMGLGKTLQAIAIAGCFISEGS---ILVVCPAVLR 258 Query: 213 HQWLVEMLRRFNLRFALFDDERYAEAQHD--AYNPFDTEQLVICSLDFARRSKQRLEHL- 269 W E L R+ L L D D AY P + +VI S + L+HL Sbjct: 259 FTW-AEELERW-LPSCLPSDVHLVFGHQDNPAYLPRWPKVVVI--------SYKMLQHLR 308 Query: 270 ---CEAEWDLLVVDEAHHLVWSE---DAPSREYQAIEQLAEHVPGVLLLTATP 316 E EW LL+VDE+HHL S+ D P E + + +AE V ++LL+ TP Sbjct: 309 TTMLEREWALLIVDESHHLRCSKKKSDPP--EIKTVLDVAEKVKHIILLSGTP 359 >UniRef50_Q3SW23 Superfamily II DNA/RNA helicases, SNF2 family n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SW23_NITWN Length = 541 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 13/172 (7%) Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 P LLAD+VGLGKTI AG++ + + ++LI+ P+ L QW E+ +F++ + Sbjct: 2 PVTLLADDVGLGKTISAGLVASELIARNRVAKILIVAPKLLGPQWKDELEAKFDIPGEVV 61 Query: 231 DDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHL--VWS 288 + A A+ D VI + AR L+ + + +D+LV+DEAH L ++ Sbjct: 62 TGSKLASAEPDEVG------AVITTYHSAR---AHLDKIPDDRFDMLVLDEAHKLRNLYG 112 Query: 289 EDAPSREYQAIEQLAEH--VPGVLLLTATPEQLGMESHFARLRLLDPNRFHD 338 D + + + + VL+LTATP Q + ++ + LL R H+ Sbjct: 113 VDPTPQVAKVFHRTLQQRRFRYVLMLTATPIQNRLWDLYSLVDLLTVARGHE 164 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 3/121 (2%) Query: 503 SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLC 562 S +++V + T ++ L E G++ + + G S A F + ++ Sbjct: 316 SWRMVVFTGRRETQTTIQAFLEEL-GLKVGIIN-GSSGQRNQDTIARFRGNPPEIRAIVS 373 Query: 563 SEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH-DIQIHVPYLEKTAQSVL 621 +E GSEG N Q A+ ++ FDLP+NP ++EQRIGR+ R+G H ++ I+ L T + + Sbjct: 374 TEAGSEGVNLQIANVLINFDLPWNPMIVEQRIGRVQRLGSQHKNVVIYNVMLAGTFEEYI 433 Query: 622 V 622 V Sbjct: 434 V 434 >UniRef50_A4RZ94 Predicted protein n=2 Tax=Mamiellales RepID=A4RZ94_OSTLU Length = 1326 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 22/184 (11%) Query: 173 VLLADEVGLGKTIEAGMILH--QQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 V+L DE+GLGKT + ++ ++ L + V ++ P T W EM + ++ ++ Sbjct: 319 VILGDEMGLGKTAQCISVIEYVRKNLIRRRQPVCVVAPLTTLGHWKREMEKWTDMNAVVY 378 Query: 231 DD---ERYAEAQHDAYNP------FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDE 281 D +R A+H+ + P FD +++ S + RR+ + E W + VVDE Sbjct: 379 DGSAADREMCAEHEFFIPGTRRVKFD---VMLVSFENVRRNTELFEQFS---WAMCVVDE 432 Query: 282 AHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQ 341 AH L +D S+ ++ L +LLLT TP Q ++ + L +LDP +FH + Sbjct: 433 AHKL---KDVNSQTTLSVTAL--RYDWLLLLTGTPIQNNIKELYGMLHILDPRQFHSWED 487 Query: 342 FVEE 345 F +E Sbjct: 488 FQDE 491 >UniRef50_C0GNM2 Helicase domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GNM2_9DELT Length = 255 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/76 (46%), Positives = 45/76 (59%) Query: 155 IPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +PHQ++ R LLADEVGLGKTIEAG+I+ + L G RVLI+ P+ L Q Sbjct: 89 LPHQIHALARATSGDKVRYLLADEVGLGKTIEAGLIMRELKLRGQVRRVLIVAPKGLVSQ 148 Query: 215 WLVEMLRRFNLRFALF 230 W+ EM F+ F L Sbjct: 149 WVAEMQFHFSEHFQLM 164 >UniRef50_B3KZB3 DNA repair protein rad54, putative n=8 Tax=Plasmodium RepID=B3KZB3_PLAKH Length = 1052 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 93/185 (50%), Gaps = 17/185 (9%) Query: 173 VLLADEVGLGKTIEAGMILHQQLLSG-----AAERVLIIVPETLQHQWLVEMLR----RF 223 +LAD++GLGKT+++ +L+ L G A R LI+ P +L + W E+ + R Sbjct: 150 CILADDMGLGKTLQSISVLYTLLKQGINKKPAVRRCLILCPASLINNWNDEINKWLPGRC 209 Query: 224 NLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAH 283 N+ + + ++ + + ++ICS + R + + L+ ++ D+++ DEAH Sbjct: 210 NVTCVNDNAKEKILSKLEGFKYDYKSTVIICSYECFRINNESLD---KSSIDMIICDEAH 266 Query: 284 HLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFV 343 L ++ ++ Y +I L+ LLL+ TP Q + FA + L +P+ F D F Sbjct: 267 RL---KNDKTKTYMSIYNLSAR--KRLLLSGTPIQNDLSEFFALISLCNPDLFDDTILFR 321 Query: 344 EEQKN 348 ++ N Sbjct: 322 KKYAN 326 >UniRef50_Q23RY4 SNF2 family N-terminal domain containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23RY4_TETTH Length = 731 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 94/484 (19%), Positives = 200/484 (41%), Gaps = 82/484 (16%) Query: 166 GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNL 225 G + R+L+ADE+G+GKTI+A + L L ++++++I P +L+ W E+ + + + Sbjct: 129 GMMNKCRILIADEMGVGKTIQA-ICLAFAYLKNLSKKMIVICPSSLKFYWKQEINKWYRV 187 Query: 226 RFALFDDERYAEAQHDAYNPFDTE-QLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHH 284 ++ + + + + + +++ICS D + + ++E + L + DEAH+ Sbjct: 188 ILNGRQVSQFIQVFQASNDQIEQQTKILICSYDIIQSAINKIE---KYNAFLGIADEAHY 244 Query: 285 LVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVE 344 L ++ ++ +AI + + V+LLT TP + ++ + +L P+ F +F + Sbjct: 245 L---KNPDTKRSKAIIPYLKQLKHVILLTGTPAFAKPQEMYSLVSILRPDVFTNFLDY-- 299 Query: 345 EQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELV 404 G++ P ++ + + S+ + + Sbjct: 300 ---------------------------------GKRYCNPKKSNFHNGLDYSGSSNELEL 326 Query: 405 SMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRA 464 L+ R+ R L ++ N + P ++ IK+ + Q S I K +D+ Sbjct: 327 HYLLTRYMMIRRLKKDVLNEL---PDKKRKKIKVSTDSSIQ-----SQIAQILKKVKDKT 378 Query: 465 RDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQ-LEQVL 523 +L Q+F+ + +++N + T + +L AK L LE++L Sbjct: 379 LQILMNPPPNQQFQNEPDSYFNGNHGSSQFQSLKTCY----MLSGLAKQQQVLNYLEELL 434 Query: 524 REREGIRAAVFHEGMSIIE------RDRAAAW------------------FAEEDTGAQV 559 + + + VF E + I++ DR + F + Sbjct: 435 KSVD--KVIVFAEHIQILDNIEKFANDRKKKYIRIDGSVRDEEKSIRVQSFENNKNISIA 492 Query: 560 LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS 619 +L S G AS+++ ++ + P ++EQ R RIGQ + + H E T + Sbjct: 493 ILSFGAASLGITLTSASNILFAEMHWTPAIMEQAEDRAHRIGQKNPVTCHYLIGEGTLDN 552 Query: 620 VLVR 623 +L + Sbjct: 553 MLYK 556 >UniRef50_B3L200 SNF2-family protein, putative n=8 Tax=Eukaryota RepID=B3L200_PLAKH Length = 3207 Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 114/471 (24%), Positives = 193/471 (40%), Gaps = 86/471 (18%) Query: 173 VLLADEVGLGKTIEA----GMILHQQLLSGAAERVLIIVPETLQHQWLVEM---LRRFNL 225 VLLADE+GLGKT++ G +L+++ L G L+IVP++ WL E L + N+ Sbjct: 1412 VLLADEMGLGKTVQTIAVVGHMLYKEKLIGP---YLVIVPQSTVDNWLNEFKSWLPQANV 1468 Query: 226 R-FALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAE------WDLLV 278 + R H+ + + D + L L + E W L+V Sbjct: 1469 VCYHGNAVSRELIRTHELKKVYVANKGFRYKFDVCITTPSILNSLSDVELLKKMPWQLMV 1528 Query: 279 VDEAHHLVWSEDAPSREYQAIEQ-LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFH 337 VDEAH L ++ S+ + ++Q +AE LLL+ TP +E + L L+P ++ Sbjct: 1529 VDEAHQL---KNRQSKRFIELKQFMAE---SKLLLSGTPLHNNLEELWTLLHFLNPQQYT 1582 Query: 338 DFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQ 397 + F QK Y N++ N L IGE + L+Q Sbjct: 1583 HYENF---QKKY-------------NEIENTSL------IGEAKQKQLMQL--------- 1611 Query: 398 SARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP-----LPTQYQTAIKVSG 452 + EL +++ R + + ++ N V+ + EL I++ L Y+ K SG Sbjct: 1612 --QHELHEVILRR--VKKDVEKSLPNKVERILRVELSPIQIEFYKNILTKNYEQLAKASG 1667 Query: 453 IMGARKSAEDRARDML----YPERIYQEFEGDNATWWNFDPRVEWLMGYLT--------- 499 GA+ S ++ ++ +P + + D + R+ + G + Sbjct: 1668 --GAKNSLQNICMELKKVCNHPFLCCEPVDKDE-----YKERLVYSSGKICLLEKLLIRL 1720 Query: 500 SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV 559 R +VL+ L + L R G + MS R +A F +++ V Sbjct: 1721 KERGNRVLIFSQMVKMLNILSEYLTLR-GFKHQRLDGTMSKEMRKKAMNHFNSKNSDDFV 1779 Query: 560 -LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 LL ++ G G N A ++++D +NP Q R RIGQ +QI+ Sbjct: 1780 FLLSTKAGGLGINLTSADTVIIYDSDWNPQNDLQAGARAHRIGQTKTVQIY 1830 >UniRef50_B9MK35 Helicase domain protein n=2 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MK35_ANATD Length = 889 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 20/182 (10%) Query: 157 HQLNIAHDVGRRHAP---RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 HQ V H R +LADEVGLGKT + GMI L G + VLIIVP+TL Sbjct: 231 HQKYFVKMVFEEHCKDRARYILADEVGLGKTAQLGMIAQITALYG-DKPVLIIVPKTLLW 289 Query: 214 QWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDT---------EQLVICSLDFARRSKQ 264 QW E+ ++ A++D +R+ Y P ++ I S + Sbjct: 290 QWQDELKTMLDIPSAVWDGKRWIVETGQEYRPQANGIPPILQCPRRIGIISQGLITSNSD 349 Query: 265 RLEHLCEAEWDLLVVDEAH-------HLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPE 317 +E L + E++ ++VDEAH + + P+ + + +L++ ++L TATP Sbjct: 350 IVEPLLDLEYECVIVDEAHRARRQNLNKPAEKPEPNNLMKFLLELSQKTKAMILATATPI 409 Query: 318 QL 319 QL Sbjct: 410 QL 411 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 3/98 (3%) Query: 509 ICAKAATALQLEQVLREREGIRAAVFHEGM-SIIERDRAAAWFAEEDTGAQVLLCSEIGS 567 I K ++A+ + + G ++ + G+ S +ERD D ++++ ++ + Sbjct: 700 IAQKLSSAMPDKNIAIYAGGDKSGIIKNGVYSKVERDEIKELVL--DGKIKLMIGTDAAA 757 Query: 568 EGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD 605 EG N Q ++ DLP+NP LEQR GR+ RIGQ D Sbjct: 758 EGLNLQTLGALINVDLPWNPIRLEQRQGRIRRIGQQFD 795 >UniRef50_Q9YF27 Putative uncharacterized protein n=1 Tax=Aeropyrum pernix RepID=Q9YF27_AERPE Length = 1039 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 10/192 (5%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILH--QQLLSGAAERVL 204 + G++ L+ HQ + R+L+AD +GLGKT+ A IL + + RVL Sbjct: 23 IYGEKNPLL-HQTEVVAKSLFIKPTRILIADVIGLGKTVTALRILKTIEHYKNQKLGRVL 81 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQ 264 I VP L QW EM R + L + + A P I S+D +R + Sbjct: 82 IAVPAVLVEQWKDEM-RSMGINPILIERK---SLDFRAKQPELPSGWYIGSIDTLKRP-E 136 Query: 265 RLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLA--EHVPGVLLLTATPEQLGME 322 + L +WD +VVDEAH L P+ ++ + +L VLLL+ATP + Sbjct: 137 YMAFLQRNKWDAIVVDEAHKLGVVGGEPNMRWRNLGKLIMENRDAIVLLLSATPHRGKAN 196 Query: 323 SHFARLRLLDPN 334 + +RL L+DP Sbjct: 197 DYLSRLALVDPT 208 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 17/173 (9%) Query: 503 SQKVLVICAKAATALQLEQVLRE-------REGIRAAVFHEGMSIIERDRAAAWFAEEDT 555 SQK +V TA L + LR+ GI E IE + W +E+ Sbjct: 452 SQKAIVFTEFKDTATYLYEKLRKWAEDEFGDPGIVRVFTSENRGEIEDIKR--WLSED-- 507 Query: 556 GAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYL-- 613 G +VL+ +++ EG N Q+A+ ++ +++ ++P LEQRIGR+ R GQ + +L Sbjct: 508 GRRVLVTTDVAGEGLNLQYANVIINYEITWSPIRLEQRIGRVWRYGQDKTTYVFNLFLAD 567 Query: 614 ---EKTAQSVLVRWYHEGLDAFEHTCPTGRTIY-DSVYNDLINYLASPDQTEG 662 ++ A++V + Y + + G ++ ++ N+L+ + +T G Sbjct: 568 GLEKEVAETVFAKLYGISISVGKLEPILGEQVFLSTIRNELLEHAVEERETIG 620 >UniRef50_UPI000186EE6A DNA repair and recombination protein RAD54B, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186EE6A Length = 840 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 106/464 (22%), Positives = 177/464 (38%), Gaps = 78/464 (16%) Query: 173 VLLADEVGLGKTIEAGMILHQQLLSG------AAERVLIIVPETLQHQWLVEMLRRFNLR 226 V+LADE+GLGKT++ ++ L G +RVLI+ P +L W E ++ R Sbjct: 278 VILADEMGLGKTLQCISLIWTLLKQGPYNKKPVIKRVLIVTPTSLIMNWYNEFIKWLG-R 336 Query: 227 FALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLV 286 + Y Q + + +VI S + R + ++ E DLLV DEAH + Sbjct: 337 VKIVP---YVVNQKNKPSEIKYHSVVIISYEMLIRC---VNNVMEHNVDLLVCDEAHRI- 389 Query: 287 WSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ 346 +++ + Q + QL + +LLT TP Q ++ + + +PN +QF Sbjct: 390 --KNSNIKTAQVLNQL--NCKKKILLTGTPLQNDLQELYTLIDFANPNILGSPSQF---- 441 Query: 347 KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS-EDAQSARQELVS 405 Q +P++ + DS ED E Sbjct: 442 -------------------------------RIQFADPIIASRQPDSNEDVVKKGNERSI 470 Query: 406 MLMDRHGTSRVLFRNTRNGVKGF--PKRELHT-IKLPLPTQYQTAIKVSGIMGARKSAE- 461 L + ++ L R TRN +K + P+ ++ K+ P + V+ + A++S E Sbjct: 471 NL--KKIINKFLLRRTRNILKNYLPPRHDIVVFCKITEPQRNMYNSLVNSFLNAKESEEF 528 Query: 462 -----------DRARDMLYPERI-----YQEFEGDNATWWNFDPRVEWLMGYLTSHRSQK 505 + YP + Y E + D T V +L + +K Sbjct: 529 IEGSSHLELITSLKKICNYPSLLNKDDNYLE-KIDIDTSGKLKVTVNFLKELQMTSVKEK 587 Query: 506 VLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEI 565 VL++ T LE+V +R++ F LL S+ Sbjct: 588 VLIVSNATQTLNLLEKVFHVL-NYSTCRLDGNTPSAQRNKIVEDFNTSRDLFIFLLSSKA 646 Query: 566 GSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 G G N AS +++FD +NP Q I R+ R GQ + I+ Sbjct: 647 GGVGLNVTGASRLILFDSDWNPATDLQAISRIWRDGQKFPVFIY 690 >UniRef50_C1ZI41 DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZI41_PLALI Length = 872 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%) Query: 540 IIERDRAAAWFA-EEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 + +R+RAA+ E+D G +VLL S + G N Q AS ++ DLP+NP +LEQRI R Sbjct: 673 VSQRERAASVSQFEDDPGTRVLLASNAAATGLNLQAASIVINVDLPWNPAILEQRIARAH 732 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVR 623 R+GQ +Q++V E+T + L++ Sbjct: 733 RMGQEKPVQVYVLVTEETFEERLLK 757 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 23/195 (11%) Query: 152 TSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 T L+ +QL A + A R +LADE+GLGKTI+A + +VL++ P ++ Sbjct: 335 TPLLGYQLEGAAFLA--CAGRAILADEMGLGKTIQALAAIEILFRELDISKVLVVCPASV 392 Query: 212 QHQWLVEMLRRFNLRFALFDDERYAEAQHDAYN--PFDTEQLVICSLDFARRSKQRLEHL 269 + QW E+L+ L E +H+ Y PF IC+ + + +H+ Sbjct: 393 KSQWRNEILKFTTHSVQLVGGS--IETRHEQYGAAPF-----TICNYEQVLK-----DHV 440 Query: 270 CEA--EWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 A WD++++DE + + +R QAI+ L +LT TP + ++ ++ Sbjct: 441 SIAAKRWDVVILDEGQRI---RNWETRTAQAIKSLRSRF--AFVLTGTPLENKLDDLYSI 495 Query: 328 LRLLDPNRFHDFAQF 342 ++ +D R +F Sbjct: 496 MQFIDDRRLSPAFRF 510 >UniRef50_B9L3B7 Helicase, Snf2 family n=2 Tax=Bacteria RepID=B9L3B7_THERP Length = 900 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 20/189 (10%) Query: 150 QRTSLIPHQ---LNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLII 206 Q T L HQ + +A D+ R R+LLADEVGLGKT++ G+ L G VL++ Sbjct: 228 QGTGLWAHQKYFVKLAFDLHRERGARLLLADEVGLGKTVQLGLAAKLMALWGGGN-VLVL 286 Query: 207 VPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVIC-------SLDFA 259 VP+ L QW E+ + A++ + + Y E L C S Sbjct: 287 VPKPLLWQWQDELWDLLAVPSAVWTGRGWIDENGVDYQANGLEGLRRCPRKVGIVSAGLI 346 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA---------IEQLAEHVPGVL 310 +S + E L ++ +++DEAH PS + ++++AE +L Sbjct: 347 TQSDEAAEILASLRYECVILDEAHRARRRNLGPSHRNEKADPNNLLRFLQRVAERTRSLL 406 Query: 311 LLTATPEQL 319 L TATP QL Sbjct: 407 LATATPVQL 415 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 31/49 (63%) Query: 558 QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 ++L+ ++ SEG N Q ++ DLP+NP LEQR GR+ RIGQ + Sbjct: 753 RILVGTDAASEGLNLQRLGTLINVDLPWNPTRLEQRKGRIQRIGQPRAV 801 >UniRef50_B7P0R8 Helicase, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7P0R8_IXOSC Length = 624 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 87/181 (48%), Gaps = 22/181 (12%) Query: 174 LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRF--NLRFALF- 230 +LADE+GLGKTI+ ++ SG L++ P + WL E RRF +L L+ Sbjct: 44 ILADEMGLGKTIQVIALVAGLADSGLPGPYLVVAPLSTLTNWLAE-FRRFTPSLTSLLYH 102 Query: 231 -DDERYAEAQHDAYNPFDTE-------QLVICSLDFARRSKQRLEHLCEAEWDLLVVDEA 282 E+ AE A D E +V+ S + A R + +L L +W LLVVDEA Sbjct: 103 GTKEQRAELVSGATRGQDPETSALRRATVVLTSYEVAMRDRAKLAPL---DWGLLVVDEA 159 Query: 283 HHLVWSEDAPSREYQAIEQLAEH-VPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQ 341 H L + + + +LA++ P LLLT TP Q + +A L L P F+D Sbjct: 160 HRL------KNFRCRLMRELAQYNAPNRLLLTGTPLQNSLTELWALLHFLIPEIFNDLRA 213 Query: 342 F 342 F Sbjct: 214 F 214 >UniRef50_Q8IAN4 DNA repair protein rad54, putative n=3 Tax=Plasmodium RepID=Q8IAN4_PLAF7 Length = 1239 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 19/180 (10%) Query: 173 VLLADEVGLGKTIEAGMILHQQLLSG-----AAERVLIIVPETLQHQWLVEMLR----RF 223 +LAD++GLGKT+++ +L+ L G A R LI+ P +L + W E+ + R Sbjct: 159 CILADDMGLGKTLQSITVLYTLLKQGFHKKCAVRRCLILCPASLINNWNDEISKWIPNRC 218 Query: 224 NLRFALFDDERYAEAQHDAYNPFDTEQLV-ICSLDFARRSKQRLEHLCEAEWDLLVVDEA 282 N+ + + ++ + + +D + V ICS + R + + L+ ++ D+++ DEA Sbjct: 219 NVTCVNDNAKEKIVSKLEGF-KYDIQSTVLICSYECFRINNEFLD---KSSIDMIICDEA 274 Query: 283 HHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQF 342 H L ++ ++ Y +I L LLL+ TP Q + +A + L +P+ F D F Sbjct: 275 HRL---KNDKTKTYTSIYNLT--AKKRLLLSGTPIQNDLGEFYALISLCNPDLFDDINLF 329 >UniRef50_A1SC34 Helicase domain protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SC34_NOCSJ Length = 724 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 13/134 (9%) Query: 488 DPRVEWLMGYL--------TSHRSQKVLVICAKAATALQLEQVLREREGI--RAAVFHEG 537 D R++ L+G+L S +++V++ A T L +VLR+R + R AV Sbjct: 172 DSRLDRLIGFLDAVCRPDGKSWSNERVVIFTEYAHTVDWLTRVLRQRGYVEDRLAVIQGS 231 Query: 538 MSIIERDRAAAWFAEEDTG--AQVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRI 594 +R+ + F + +VLL ++ EG + Q H +V FD+PFNP LEQRI Sbjct: 232 TKPEDREYIRSQFTADPAKELVRVLLATDAAGEGIDLQTHCHRLVNFDIPFNPSRLEQRI 291 Query: 595 GRLDRIGQAHDIQI 608 GR+DR GQ + Q+ Sbjct: 292 GRIDRYGQTDEPQV 305 >UniRef50_D2QY10 Helicase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY10_9PLAN Length = 949 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 19/247 (7%) Query: 114 RLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV 173 RL Q RM R A+R+ R + P+ P+QL + R+ Sbjct: 61 RLGDFQSCRMLRNAIRFGFRSSAG-----PFRSFGKIAVEPRPYQLVPLLMALKLDPVRL 115 Query: 174 LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNL--RFALFD 231 L+AD+VG+GKT+EA +I + L +R+ ++ P L QW E+ +F++ L Sbjct: 116 LIADDVGIGKTVEALLIARELLDRAEVQRMSVLCPPHLAEQWQDELRDKFHIEAELVLSS 175 Query: 232 DERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA 291 + + + FD I SLD+ +S+ R A +L++VDEAH S Sbjct: 176 TAKRLDRVCGNRSVFDVFPYTIVSLDYI-KSESRRNDFIRACPELVIVDEAHTCTSSAQ- 233 Query: 292 PSR------EYQAIEQLAEHVPG--VLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFV 343 P R ++ + +L++ P +LL+TATP E + L LL+P F D + Sbjct: 234 PGRGGTRQQRHEVVRELSKS-PNRHMLLVTATPHSGNEEGFRSLLGLLNPE-FADLPTDL 291 Query: 344 EEQKNYR 350 +N R Sbjct: 292 SGDENRR 298 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 19/205 (9%) Query: 459 SAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ--KVLVICAKAATA 516 +A++R R +L R + EGD DP++ ++ + S+ + ++ C ATA Sbjct: 446 AAKERKR-LLDMARAADKLEGDG------DPKLVQMVPIVKRLVSEGHRPILFCRFIATA 498 Query: 517 LQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ-FA 575 L + LR+R V I +R A + VL+C++ SEG N Q Sbjct: 499 EYLAEQLRQRLPKGVTVIAVTGQIPPSEREARIQEMRNHEQYVLVCTDCLSEGINLQHLF 558 Query: 576 SHMVMFDLPFNPDLLEQRIGRLDRIGQAH-DIQIHVPY-----LEKTAQSVLVRWYHEGL 629 ++ +DL +NP EQR GR+DR GQ ++++ Y ++ VL+R + Sbjct: 559 DSVIHYDLSWNPTRHEQREGRVDRFGQPKPEVKVLTYYGTDNQIDGVVLEVLIRKHKAIR 618 Query: 630 DAFEHTCP---TGRTIYDSVYNDLI 651 A + P T + +++Y L+ Sbjct: 619 KALGVSVPVPTTSNAVLEALYEGLL 643 >UniRef50_Q9LJK7 DNA repair protein RAD54-like n=9 Tax=Magnoliophyta RepID=Q9LJK7_ARATH Length = 959 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 106/485 (21%), Positives = 185/485 (38%), Gaps = 82/485 (16%) Query: 173 VLLADEVGLGKTIEAGMILHQQLLSG-----AAERVLIIVPETLQHQWLVEMLRRFNLRF 227 +LAD++GLGKT+++ +L+ L G ++ +I+ P +L W E+ + R Sbjct: 207 CILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRI 266 Query: 228 ALFDDERYAEAQHDAY--------NPFDTEQLVICSLDFARRSKQRLEHLCEAE-WDLLV 278 L E+ D P Q++I S + R + C++E DLL+ Sbjct: 267 QLI---ALCESTRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSK---FCQSESCDLLI 320 Query: 279 VDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHD 338 DEAH L + +R ++ +LL+ TP Q +E FA + +P D Sbjct: 321 CDEAHRLKNDQTLTNRALASLT-----CKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGD 375 Query: 339 FAQF----------------VEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDI 382 A F EE+KN AD A L +K++ L ++ Sbjct: 376 AAHFRHYYEAPIICGREPTATEEEKNL--AADRSAEL--SSKVNQFILRRTNALLSNHLP 431 Query: 383 EPLLQAANSDSEDAQS-------ARQELVSMLMDRHGTSRVL-FRNTRNGVKGFPKRELH 434 +++ QS + + L L D ++VL + + PK Sbjct: 432 PKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLAYITALKKLCNHPKLIYD 491 Query: 435 TIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ----EFEGDNATWWNFDPR 490 TIK P G +G E +P ++ + G + W + Sbjct: 492 TIKSGNP----------GTVGFENCLE------FFPAEMFSGRSGAWTGGDGAWVELSGK 535 Query: 491 VEWLMGYLTSHRSQ---KVLVICAKAATALQLEQVLREREGIRAAVFH-EGMSIIERDRA 546 + L L + R + +++++ T Q+ RER R +G + I + + Sbjct: 536 MHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRER---RYPFLRLDGSTTISKRQK 592 Query: 547 AAWFAEEDTGAQ--VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 + T + LL S+ G G N A+ +V+FD +NP +Q R+ R GQ Sbjct: 593 LVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKK 652 Query: 605 DIQIH 609 + ++ Sbjct: 653 RVYVY 657 >UniRef50_Q8IJG6 Chromodomain-helicase-DNA-binding protein 1 homolog, putative n=2 Tax=Eukaryota RepID=Q8IJG6_PLAF7 Length = 3328 Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 114/482 (23%), Positives = 194/482 (40%), Gaps = 108/482 (22%) Query: 173 VLLADEVGLGKTIEA----GMILHQQLLSGAAERVLIIVPETLQHQWL------------ 216 VLLADE+GLGKT++ G +L+++ L G L+IVP++ WL Sbjct: 1317 VLLADEMGLGKTVQTIAVVGHMLYKEKLIGP---YLVIVPQSTVDNWLNEFKSWLPQANV 1373 Query: 217 ---------VEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLE 267 E++R L+ ++ Y FD V + S +E Sbjct: 1374 VCYHGNAVSRELIRTHELKKVYVPNKGYRYK-------FD----VCITTPSILNSVSDVE 1422 Query: 268 HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ-LAEHVPGVLLLTATPEQLGMESHFA 326 L + W L+VVDEAH L ++ S+ + ++Q +AE LLL+ TP +E + Sbjct: 1423 LLKKMPWQLMVVDEAHQL---KNRQSKRFIELKQFMAE---SKLLLSGTPLHNNLEELWT 1476 Query: 327 RLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLL 386 L L+P ++ + F QK Y N++ N L IGE + L+ Sbjct: 1477 LLHFLNPQQYTYYETF---QKKY-------------NEIENTSL------IGEAKQKQLI 1514 Query: 387 QAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP-----LP 441 Q + EL +++ R + + ++ N V+ + EL I++ L Sbjct: 1515 Q-----------LQHELHEVILRR--VKKDVEKSLPNKVERILRVELSPIQIEYYKNILT 1561 Query: 442 TQYQTAIKVSGIMGARKSAEDRARDML----YPERIYQEFEGDNATWWNFDPRVEWLMGY 497 Y+ K SG GA+ S ++ ++ +P + + D + R+ + G Sbjct: 1562 KNYEQLAKASG--GAKNSLQNICMELKKVCNHPFLCAEPLDKD-----EYKERLVYSSGK 1614 Query: 498 LT---------SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAA 548 + R +VL+ L + L R G + M+ R +A Sbjct: 1615 ICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLR-GFKHQRLDGTMTKEMRKKAMN 1673 Query: 549 WFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 F +++ V LL ++ G G N A ++++D +NP Q R RIGQ +Q Sbjct: 1674 HFNSKNSDDFVFLLSTKAGGLGINLTSADTVIIYDSDWNPQNDLQAGARAHRIGQTKTVQ 1733 Query: 608 IH 609 I+ Sbjct: 1734 IY 1735 >UniRef50_C6HV11 DNA/RNA helicase, SNF2 family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HV11_9BACT Length = 824 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 1/81 (1%) Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNP 587 GI + FH G+ R F ED +V L ++ GS G N Q AS +V DLP+NP Sbjct: 564 GIGSVSFHGGIPSDRRPALVERF-REDPDCRVFLSTDAGSTGLNLQHASVLVNMDLPWNP 622 Query: 588 DLLEQRIGRLDRIGQAHDIQI 608 +LEQRI R+ R+GQ +QI Sbjct: 623 AILEQRIARIHRMGQKRPVQI 643 >UniRef50_UPI0001AF474A helicase domain-containing protein n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF474A Length = 955 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 21/207 (10%) Query: 122 RMDRFALRYRARKYSSEQFRMPYSGL--RGQRTSLIPHQLNIAHDVGRRHAPRVLLADEV 179 R+ R ALR R S FR ++GL + L+P + A + R +L+AD V Sbjct: 72 RLLRDALRLSFRG-SGGPFRS-FAGLAVTPRNYQLVPLMMAAAQETTR-----LLIADGV 124 Query: 180 GLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF---DDERYA 236 G+GKT+EAG+I + L +G A+R++++ L QW E+ +F + L R Sbjct: 125 GIGKTVEAGLIAAELLATGNAQRMVVLCSPQLAPQWQHELRDKFGIGAQLLLPSTVNRLM 184 Query: 237 EAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAH----HLVWSEDAP 292 + N ++ ++ S DF ++ +R E +L++VDEAH H + A Sbjct: 185 RSVPFGSNVYEHHPHLVISTDFIKQRTRRDEFALHCP-ELVIVDEAHSCVPHAGTARSAQ 243 Query: 293 SR-EYQAIEQLAEHVPG--VLLLTATP 316 ++ Y + +LA+ PG +LLLT TP Sbjct: 244 TQLRYTLLRKLADD-PGRHLLLLTGTP 269 >UniRef50_D1HST8 Whole genome shotgun sequence of line PN40024, scaffold_9.assembly12x (Fragment) n=3 Tax=Magnoliophyta RepID=D1HST8_VITVI Length = 1539 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 24/194 (12%) Query: 168 RHAPRVLLADEVGLGKTIEA----GMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRF 223 R+ V+LADE+GLGKT+++ G + + Q + G L++VP + W E + Sbjct: 437 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIYGP---FLVVVPLSTLSNWAKEFKKWL 493 Query: 224 -NLRFALFDDERYAE---AQHDAYNPFDTEQLVI-----CSLDFARRSKQRLEHLCEAEW 274 +L ++ R + Q++ Y T + ++ + + + K L + +W Sbjct: 494 PDLNVIVYVGTRASREVCQQYEFYTNKKTGRTILFNALLTTYEVVLKDKAVLSKI---KW 550 Query: 275 DLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN 334 + L+VDEAH L SE ++ Y + + + LL+T TP Q +E +A L LDP+ Sbjct: 551 NYLMVDEAHRLKNSE---AQLYTTLSEFS--AKNKLLITGTPLQNSVEELWALLHFLDPD 605 Query: 335 RFHDFAQFVEEQKN 348 +F + FV+ KN Sbjct: 606 KFKNKDDFVQNYKN 619 >UniRef50_B6K0L8 ATP-dependent helicase RIS1 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K0L8_SCHJY Length = 867 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 4/142 (2%) Query: 471 ERIYQEFEGDNATW---WNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLRERE 527 +R Y+ F W +E + T +K+L+ ++ L+L V +RE Sbjct: 678 QRFYRRFSRHLDEWVPSSKIQSAIELVRRIRTEQPGEKILIF-SQFTQFLELLSVPLQRE 736 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNP 587 GIR V+ MS +RD A F +++ +L+ + GS G N A+H+V+ D +NP Sbjct: 737 GIRFVVYDGSMSASQRDEAIHRFQHKESVQVMLVSLKAGSTGLNLTAANHVVLLDPFYNP 796 Query: 588 DLLEQRIGRLDRIGQAHDIQIH 609 + EQ I R RIGQ ++ ++ Sbjct: 797 SVEEQAIDRAYRIGQKREVHVY 818 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 36/225 (16%) Query: 154 LIPHQLN-----IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGA--AERVLII 206 L+PHQL + G H +LAD++GLGKT++A +L + A + LI+ Sbjct: 265 LMPHQLEGQRWMCGMEQGLVHGG--ILADDMGLGKTVQALALLTSRRACAADGPKTNLIV 322 Query: 207 VPETLQHQWLVEMLRRF--NLRFALFDDERYAEAQHDAY--NPFDTEQLVICSLDFARRS 262 V L HQW E+ + + RF ++ + +D+Y + FD ++ F +S Sbjct: 323 VSVALLHQWADEIQSKVAADQRFKVYVHHGSTKRDYDSYQMSQFDVVLTTYNTIAFEFKS 382 Query: 263 KQRLEH--------------LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPG 308 +R + E W +++DEAH + E A+ A + Sbjct: 383 YKRYQAKLAQDADAPSQSFPFLETVWYRILLDEAHTIRNHET-----LAAVGCCALNASY 437 Query: 309 VLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY-RPV 352 LT TP Q + ++ L+ L R + ++ QK++ RP+ Sbjct: 438 RWCLTGTPIQNHIGELYSLLKFL---RVKPYCKWSVFQKDFTRPL 479 >UniRef50_D1CIG5 Helicase domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CIG5_THET1 Length = 950 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 16/205 (7%) Query: 142 MPYSGLRGQRTSLIPHQLNIAHDVG--RRHAPRVLLADEVGLGKTIEAGMILHQQLLSGA 199 +P+ L R S +P V R+ R+L+AD+VG+GKTIEA +I + L G Sbjct: 89 VPFRSL--GRLSFVPRPYQFVPLVMALRQRVVRLLIADDVGVGKTIEAALIARELLDRGI 146 Query: 200 AERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA----YNPFDTEQLVICS 255 R+ ++ P L QW E+ +F++ + + + + F ++ S Sbjct: 147 IRRLAVLCPAHLCSQWQTELAEKFSIHAEVVQPSTIGRLERNLPRTDVSIFKHYPFLVAS 206 Query: 256 LDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE----YQAIEQLAEHVP-GVL 310 +DF + + R E +L++VDEAH + S + Y + LA ++ Sbjct: 207 IDFLKGDRYR-ETFVRDAPELIIVDEAHIATRPGERGSSQQQQRYSLLSALARRADRHLV 265 Query: 311 LLTATPEQLGMESHF-ARLRLLDPN 334 L+TATP G+E F + L LLDP Sbjct: 266 LVTATPHS-GIEGSFRSLLGLLDPR 289 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Query: 558 QVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD 605 +VL+ ++ SEG N Q +V +DLP+NP+ LEQR GR+DR GQ D Sbjct: 546 RVLVATDCLSEGINLQDHFDAVVHYDLPWNPNRLEQREGRVDRFGQQRD 594 >UniRef50_Q0D4X8 Os07g0598300 protein (Fragment) n=6 Tax=Poaceae RepID=Q0D4X8_ORYSJ Length = 1158 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 11/168 (6%) Query: 151 RTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPET 210 R +L+P QL RRH R L+ADE+GLGKT++A I G VLI+ P Sbjct: 187 RDALLPFQLEGVKFGLRRHG-RCLIADEMGLGKTLQAIAIACCYKDEGP---VLIVCPAV 242 Query: 211 LQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD-TEQLVICSLDFARRSKQRLEHL 269 L++ W E L R++ F L D D+ + V+ S R ++ + + Sbjct: 243 LRYTW-AEELERWDPSF-LPKDIHLVFGHQDSLERLGACPKAVVISYQMLSRLRKSMMN- 299 Query: 270 CEAEWDLLVVDEAHHLVWSEDAPSR-EYQAIEQLAEHVPGVLLLTATP 316 W L+++DE+H++ ++ + E QA+ +LA +V ++LL+ TP Sbjct: 300 --RRWALMIIDESHNIRCTKKKHEKNETQAVLELAPNVSRIVLLSGTP 345 >UniRef50_Q7UGF2 Helicase, Snf2 family n=3 Tax=Bacteria RepID=Q7UGF2_RHOBA Length = 914 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 28/196 (14%) Query: 154 LIPHQLN-IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAE--RVLIIVPET 210 L+P+QL+ IA G A R +LAD++GLGKTI+ I +LL+ ++ RVL++ P + Sbjct: 346 LLPYQLDGIAFAAG---AGRAILADDMGLGKTIQG--IGVAELLAKLSDISRVLVVCPAS 400 Query: 211 LQHQWLVEMLRRFNLRFALF----DDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRL 266 L+ QW E+ RF+ R + +ER + + D + IC+ + R + Sbjct: 401 LKSQWRDEIA-RFSGRSSQIVLGKGEERIEQYESDTF-------FTICNYEQVLRDLTAV 452 Query: 267 EHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFA 326 E++ WDL+++DE + ++ S+ I QL P L+L+ TP + + F Sbjct: 453 ENV---SWDLIILDEGQRI---KNWESKTSNVIRQL--ESPFRLVLSGTPLENRLGELFT 504 Query: 327 RLRLLDPNRFHDFAQF 342 R +D + QF Sbjct: 505 VTRFIDDDLLGPAYQF 520 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 36/58 (62%) Query: 552 EEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 + D +V+ + GS G N Q A+ ++ DLP+NP +LEQRI R R+GQ + + ++ Sbjct: 696 QNDPECRVINMTNAGSTGLNLQAANTVINVDLPWNPAVLEQRIARAYRMGQENPVHVY 753 >UniRef50_Q0RUT7 Possible ATP-dependent helicase n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RUT7_RHOSR Length = 417 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 3/90 (3%) Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 PR+L+AD VGLGKT+E GMIL + + G ER+L++ P+ + Q E+ RF L F Sbjct: 322 PRILIADAVGLGKTLEIGMILSELVRRGRGERILVVTPKHVLEQMQHELWCRFALPFVRL 381 Query: 231 DD---ERYAEAQHDAYNPFDTEQLVICSLD 257 D ++ + NPF + I S+D Sbjct: 382 DSAGIQKVRQKLPATRNPFTYFKRAIISID 411 >UniRef50_B9HP20 Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HP20_POPTR Length = 1748 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 19/186 (10%) Query: 168 RHAPRVLLADEVGLGKTIEA----GMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRF 223 R+ V+LADE+GLGKT+++ G + + Q +SG L++VP + W E + Sbjct: 635 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQISGP---FLVVVPLSTLSNWAKEFRKWL 691 Query: 224 -NLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEA 282 ++ ++ R + + F ++ + + + K L + +W+ L+VDEA Sbjct: 692 PDMNVIVYVGTRASRERVGQPIKFSA---LLTTYEVVLKDKAVLSKI---KWNYLMVDEA 745 Query: 283 HHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQF 342 H L SE ++ Y + + + LL+T TP Q +E +A L LDP++F F Sbjct: 746 HRLKNSE---AQLYTTLLEFS--TKNKLLITGTPLQNSVEELWALLHFLDPDKFRSKDDF 800 Query: 343 VEEQKN 348 V KN Sbjct: 801 VHNYKN 806 >UniRef50_Q6BY55 DEHA2A12276p n=4 Tax=Saccharomycetaceae RepID=Q6BY55_DEBHA Length = 771 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 25/208 (12%) Query: 174 LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN-----LRFA 228 +LADE+GLGKTI+ L + +G LI+VP + W E+ +RF L++ Sbjct: 138 ILADEMGLGKTIQCIAFLTFLMENGINGPFLIVVPLSTISNWCNEV-KRFAPSLKMLKYI 196 Query: 229 LFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 ER A YN +V+ S + + R +L + W L+VDE H L Sbjct: 197 GSKQERSDLAISSDYN------IVLTSYEISIRDFSKLNRI---NWKYLIVDEGHRL--- 244 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 ++ + +++L +V LL+T TP Q ++ ++ L + P+ FHD F ++ N Sbjct: 245 KNMNCTLIKFLKKL--NVNNKLLITGTPLQNNLDELWSLLNFILPDIFHDLDLF-QQWFN 301 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEM 376 + D + N ++DE N L EM Sbjct: 302 F----DELTNFQQQNTGNDDETNRLIEM 325 >UniRef50_B9WDA2 ATP-dependent helicase, putative n=5 Tax=Saccharomycetales RepID=B9WDA2_CANDC Length = 870 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 11/171 (6%) Query: 174 LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRF--NLRFALFD 231 +LADE+GLGKT++ L + +G L++VP + W E +R+F ++ + Sbjct: 199 ILADEMGLGKTLQCISFLSHLIENGINGPFLVVVPVSTLSNWFNE-IRKFAPKIKVTKYI 257 Query: 232 DERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA 291 + + D + +++ S + + R L + W L+VDE H L +++ Sbjct: 258 GTKQERNEIDLLQQQEITNIILTSYEISIRD---FNKLVKINWKYLIVDEGHRL---KNS 311 Query: 292 PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQF 342 + +++L +V LLLT TP Q + ++ L + P+ FHD F Sbjct: 312 QCLLIKILKKL--NVSNRLLLTGTPLQNNLNELWSLLNFILPDIFHDLELF 360 >UniRef50_C1D0X1 Putative uncharacterized protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1D0X1_DEIDV Length = 916 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 90/190 (47%), Gaps = 23/190 (12%) Query: 153 SLIPHQLNIAHDVGRRHA-----PRVLLADEVGLGKTIEAGMILHQQLLSGAAER-VLII 206 L PHQ H H+ R+LLAD+VGLGKT++ + + Q+++ E+ VLI Sbjct: 241 GLWPHQKAFIHQTILAHSGPFKRARLLLADQVGLGKTLQ--LAVSAQIIALQGEKPVLIA 298 Query: 207 VPETLQHQWLVEMLRRFNLRFALFD-------DERYAEAQHDAYNPFDTEQLVICSLDFA 259 VP+TL QW EM + A +D DER + P + L F Sbjct: 299 VPKTLLGQWQAEMWDLLRVPSARWDSSVKGWIDERGRVTRGFRNCPRRIALVSSSWLSFL 358 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA----PSREYQAIEQLAEHVPGVLLLTAT 315 S + E +++L+++DEAH S P+ Y+A +LA VLL TAT Sbjct: 359 GDSPH---EVFEQDFELVILDEAHRARKSGKGKQRRPNNLYRAFCRLAARSRSVLLATAT 415 Query: 316 PEQLGM-ESH 324 P QL + E+H Sbjct: 416 PVQLDLVEAH 425 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 33/51 (64%) Query: 554 DTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 D +L+ ++ SEG N Q S+++ DLP+NP LEQR GR+ RIGQ H Sbjct: 754 DGTVTLLVGTDAASEGLNLQRLSNLINIDLPWNPTRLEQRKGRIQRIGQKH 804 >UniRef50_C2LZW0 Helicase, SNF2/RAD54 family n=1 Tax=Staphylococcus hominis SK119 RepID=C2LZW0_STAHO Length = 1220 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 26/147 (17%) Query: 174 LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRR--FNLRFALFD 231 +L+D VGLGKT+ A I++ + +S VLI+ P +L+ QW +E+L +NL + + Sbjct: 274 MLSDSVGLGKTVTAASIIN-KYISEGKNNVLIVAPASLEEQW-IEVLENPPWNLTYK--N 329 Query: 232 DERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA 291 + ++ Q+ I +D + K ++E+ E+ +L ++DEAH+ + Sbjct: 330 NFKFISQQN------------IGEID---KLKNKIENKLESNVNLFIIDEAHNY---RNP 371 Query: 292 PSREYQAIEQLAEHVPG--VLLLTATP 316 S+ Y + +L + P VLLLTATP Sbjct: 372 NSQRYIEMLKLLQTSPNADVLLLTATP 398 >UniRef50_A4RVY4 Predicted protein n=2 Tax=Ostreococcus RepID=A4RVY4_OSTLU Length = 898 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 31/171 (18%) Query: 174 LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEM----LRRFNLRFAL 229 +LAD++GLGKT++A + L SGAA+RVL++ P TL WL E+ LRR F Sbjct: 109 ILADDMGLGKTLQACAFVAGLLRSGAAKRVLVLAPTTLLPHWLKELETCGLRRGETVFKY 168 Query: 230 FDDERYA---------------EAQHDAYNPFDTEQLVICSLDFARRSKQR-------LE 267 + R A A + +E D A R+ R + Sbjct: 169 YGGSRGALDKQLRACATGRGALLASYGMVTSRASELGAPSDEDEAERASAREGRGVAPKD 228 Query: 268 HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 E WD +V+DE H L ++A +R Q + QL ++ +++T TP Q Sbjct: 229 FAGEFRWDWIVMDEGHAL---KNATTRLAQKVRQLPANL--RMIVTGTPVQ 274 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 3/126 (2%) Query: 486 NFDPRVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIER 543 + + +LM L R++ + LV AT +E +RE I+ +++ ER Sbjct: 496 SLSAKSRFLMAMLDRFRAEGRRTLVFSQSQATLNVVEACIRE-ANIKFVRIDGKVNVDER 554 Query: 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 DR F +LL + +G G A+ ++++D +NP Q + R RIGQ Sbjct: 555 DRRVTQFRSNADIPVMLLTARVGGLGLTLTEATRVIIYDPAWNPTTDNQSVDRAYRIGQT 614 Query: 604 HDIQIH 609 D+ ++ Sbjct: 615 KDVVVY 620 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B7VIC2 RNA polymerase-associated protein rapA n=29 Tax=... 1162 0.0 UniRef50_A7MSB2 RNA polymerase-associated protein rapA n=212 Tax... 1154 0.0 UniRef50_A1RFP5 RNA polymerase-associated protein rapA n=21 Tax=... 1116 0.0 UniRef50_A3MZ32 RNA polymerase-associated protein rapA n=32 Tax=... 1090 0.0 UniRef50_C6AQR6 RNA polymerase-associated protein RapA (ATP-depe... 1048 0.0 UniRef50_A5UAT0 RNA polymerase-associated protein rapA n=16 Tax=... 1026 0.0 UniRef50_B3PHI1 RNA polymerase-associated protein HepA n=2 Tax=G... 1012 0.0 UniRef50_Q2SC88 Superfamily II DNA/RNA helicase, SNF2 family n=2... 1007 0.0 UniRef50_B7V6T4 RNA polymerase-associated protein rapA n=24 Tax=... 996 0.0 UniRef50_B4RZE3 RNA polymerase-associated protein HepA n=3 Tax=A... 992 0.0 UniRef50_C6MG44 SNF2-related protein n=1 Tax=Nitrosomonas sp. AL... 987 0.0 UniRef50_Q5ZT66 ATP-dependent RNA helicase n=9 Tax=Gammaproteoba... 981 0.0 UniRef50_B7RWY5 Type III restriction enzyme, res subunit family ... 963 0.0 UniRef50_C0N229 Type III restriction enzyme, res subunit family ... 945 0.0 UniRef50_Q1R0C7 Helicase-like protein n=4 Tax=Gammaproteobacteri... 923 0.0 UniRef50_A4A3Z1 RNA polymerase associated protein rapA n=1 Tax=C... 921 0.0 UniRef50_C5SAQ5 Helicase domain protein n=1 Tax=Allochromatium v... 901 0.0 UniRef50_B5JYH0 RNA polymerase-associated protein HepA n=1 Tax=g... 897 0.0 UniRef50_Q0VNA6 RNA polymerase-associated protein HepA n=2 Tax=A... 885 0.0 UniRef50_Q5QVN2 Probable ATP-dependent RNA helicase HepA n=2 Tax... 882 0.0 UniRef50_UPI0000E0E48B ATP-dependent helicase HepA n=1 Tax=Glaci... 878 0.0 UniRef50_Q1Q8E0 Helicase-like n=22 Tax=Gammaproteobacteria RepID... 878 0.0 UniRef50_A0Z260 ATP-dependent helicase HepA n=1 Tax=marine gamma... 875 0.0 UniRef50_B9XDU2 SNF2-related protein n=1 Tax=bacterium Ellin514 ... 872 0.0 UniRef50_B4DAH6 Helicase domain protein n=2 Tax=Verrucomicrobia ... 868 0.0 UniRef50_B5JQV3 Type III restriction enzyme, res subunit family ... 853 0.0 UniRef50_A6VZC5 Helicase domain protein n=2 Tax=Marinomonas RepI... 843 0.0 UniRef50_A6DT84 ATP-dependent helicase HepA n=1 Tax=Lentisphaera... 838 0.0 UniRef50_B1ZQP7 Helicase domain protein n=4 Tax=Bacteria RepID=B... 833 0.0 UniRef50_C0QC91 RapA n=1 Tax=Desulfobacterium autotrophicum HRM2... 829 0.0 UniRef50_Q1MY01 ATP-dependent helicase HepA n=1 Tax=Bermanella m... 801 0.0 UniRef50_Q21K39 Helicase-like protein n=1 Tax=Saccharophagus deg... 790 0.0 UniRef50_C5BJV2 RNA polymerase-associated protein RapA n=1 Tax=T... 789 0.0 UniRef50_C9RJU1 Helicase domain protein n=1 Tax=Fibrobacter succ... 786 0.0 UniRef50_A4BDR8 Superfamily II DNA/RNA helicase, SNF2 family pro... 756 0.0 UniRef50_Q08VX8 Type III restriction enzyme, res subunit family ... 542 e-152 UniRef50_UPI0001698444 ATP-dependent helicase HepA n=1 Tax=Endor... 537 e-151 UniRef50_B9LWH1 Helicase domain protein n=3 Tax=Halobacteriaceae... 441 e-122 UniRef50_Q04VV1 DNA/RNA helicase Superfamily II n=6 Tax=Leptospi... 434 e-119 UniRef50_B9LVL0 Helicase domain protein n=1 Tax=Halorubrum lacus... 416 e-114 UniRef50_C7NT14 Helicase domain protein n=1 Tax=Halorhabdus utah... 408 e-112 UniRef50_D1JIN1 Putative uncharacterized protein rapA n=1 Tax=un... 387 e-106 UniRef50_A7NJN1 Helicase domain protein n=3 Tax=cellular organis... 385 e-105 UniRef50_Q2RKS1 Helicase-like n=1 Tax=Moorella thermoacetica ATC... 384 e-105 UniRef50_A5D3Z6 Putative uncharacterized protein n=3 Tax=Bacteri... 384 e-104 UniRef50_B0TFG6 Helicase (Snf2 family) protein n=1 Tax=Heliobact... 380 e-103 UniRef50_C5A7B3 Type III restriction endonuclease, res subunit n... 377 e-102 UniRef50_B0K8X0 Helicase domain protein n=6 Tax=Clostridia RepID... 375 e-102 UniRef50_A4IQV6 Helicase, Snf2/Rad54 family n=11 Tax=Bacillaceae... 375 e-102 UniRef50_P54509 Uncharacterized ATP-dependent helicase yqhH n=93... 373 e-101 UniRef50_C0GU74 Helicase domain protein n=1 Tax=Desulfonatronosp... 371 e-101 UniRef50_A7HSB4 Helicase domain protein n=6 Tax=Bacteria RepID=A... 370 e-100 UniRef50_B0TB39 Snf2 family helicase, putative n=2 Tax=Clostridi... 368 e-100 UniRef50_A9B2A6 Helicase domain protein n=1 Tax=Herpetosiphon au... 367 1e-99 UniRef50_A7HHH1 Helicase domain protein n=6 Tax=Bacteria RepID=A... 365 6e-99 UniRef50_C7HF43 Helicase domain protein n=1 Tax=Clostridium ther... 364 1e-98 UniRef50_UPI0001AF4744 SNF2 family helicase n=1 Tax=Mycobacteriu... 363 2e-98 UniRef50_A0YV27 Putative uncharacterized protein n=1 Tax=Lyngbya... 362 3e-98 UniRef50_C7HAN1 ATP-dependent helicase n=1 Tax=Faecalibacterium ... 358 8e-97 UniRef50_C8WXJ2 SNF2-related protein n=2 Tax=Alicyclobacillus ac... 355 4e-96 UniRef50_B1KKL5 Helicase domain protein n=1 Tax=Shewanella woody... 354 7e-96 UniRef50_C5VAI1 Helicase domain protein n=2 Tax=Corynebacterium ... 353 2e-95 UniRef50_A1T433 Helicase domain protein n=1 Tax=Mycobacterium va... 351 1e-94 UniRef50_D1B6S6 Helicase domain protein n=7 Tax=Bacteria RepID=D... 350 1e-94 UniRef50_C1XVJ8 DNA/RNA helicase, superfamily II, SNF2 family n=... 349 3e-94 UniRef50_B1I2C6 Helicase domain protein n=1 Tax=Candidatus Desul... 349 4e-94 UniRef50_A1UB35 Helicase domain protein n=5 Tax=Actinomycetales ... 348 6e-94 UniRef50_C1TPU8 DNA/RNA helicase, superfamily II, SNF2 family n=... 348 9e-94 UniRef50_B8CWH2 Helicase domain protein n=1 Tax=Halothermothrix ... 347 1e-93 UniRef50_Q1IY45 Helicase-like protein n=3 Tax=Deinococci RepID=Q... 345 4e-93 UniRef50_A4YAV4 Helicase domain protein n=5 Tax=Proteobacteria R... 345 7e-93 UniRef50_A0L7C3 Helicase domain protein n=3 Tax=Bacteria RepID=A... 343 2e-92 UniRef50_Q9KE87 SNF2 helicase n=1 Tax=Bacillus halodurans RepID=... 341 7e-92 UniRef50_B9LVT7 Helicase domain protein n=2 Tax=Halobacteriaceae... 341 1e-91 UniRef50_A6L6P1 Putative ATP-dependent helicase n=1 Tax=Bacteroi... 340 1e-91 UniRef50_UPI0001BC7C8F helicase domain protein n=1 Tax=Bacteroid... 338 4e-91 UniRef50_D0TGQ7 Helicase domain-containing protein n=1 Tax=Bacte... 337 1e-90 UniRef50_Q18F85 ATP-dependent helicase HepA n=3 Tax=Halobacteria... 337 1e-90 UniRef50_D0N059 Chromodomain-helicase-DNA-binding protein, putat... 336 2e-90 UniRef50_Q5P8V3 ATP-dependent helicase n=4 Tax=Bacteria RepID=Q5... 335 5e-90 UniRef50_A7AJJ3 Putative uncharacterized protein n=2 Tax=Parabac... 333 2e-89 UniRef50_C5DA36 Helicase domain protein n=4 Tax=Bacillaceae RepI... 333 2e-89 UniRef50_B8HYW4 Helicase domain protein n=1 Tax=Cyanothece sp. P... 333 2e-89 UniRef50_C9ZFV2 Putative helicase SNF2 family protein n=1 Tax=St... 332 4e-89 UniRef50_A6NWV9 Putative uncharacterized protein n=1 Tax=Bactero... 332 4e-89 UniRef50_D1P919 Helicase n=1 Tax=Prevotella copri DSM 18205 RepI... 331 6e-89 UniRef50_C4Q1A8 Expressed protein n=1 Tax=Schistosoma mansoni Re... 331 7e-89 UniRef50_A6DRD5 Putative ATP-dependent helicase n=1 Tax=Lentisph... 331 7e-89 UniRef50_O61845 Temporarily assigned gene name protein 192 (Frag... 331 9e-89 UniRef50_Q2J9F3 Helicase-like n=3 Tax=Actinomycetales RepID=Q2J9... 330 2e-88 UniRef50_Q8TD26 Chromodomain-helicase-DNA-binding protein 6 n=30... 329 4e-88 UniRef50_C9RHU2 Helicase domain protein n=1 Tax=Methanocaldococc... 329 4e-88 UniRef50_B9XSE7 SNF2-related protein n=1 Tax=bacterium Ellin514 ... 328 5e-88 UniRef50_A0LQ13 Helicase domain protein n=5 Tax=Bacteria RepID=A... 328 5e-88 UniRef50_A8L3E6 Helicase domain protein n=2 Tax=Actinomycetales ... 328 9e-88 UniRef50_Q3MDI7 SNF2-related Helicase n=2 Tax=Cyanobacteria RepI... 327 1e-87 UniRef50_A1BHU0 Helicase domain protein n=5 Tax=Bacteria RepID=A... 326 2e-87 UniRef50_D0LCG3 Helicase domain protein n=2 Tax=Actinomycetales ... 326 3e-87 UniRef50_C8X714 Helicase domain protein n=2 Tax=Actinomycetales ... 326 3e-87 UniRef50_Q4SNT6 Chromosome 15 SCAF14542, whole genome shotgun se... 326 3e-87 UniRef50_D2SCJ3 Helicase domain protein n=3 Tax=Actinomycetales ... 326 4e-87 UniRef50_Q4RLJ2 Chromosome undetermined SCAF15020, whole genome ... 325 4e-87 UniRef50_A4VQ25 Superfamily II DNA/RNA helicase, SNF2 family n=1... 325 4e-87 UniRef50_A9T545 SNF2 family chromodomain-helicase n=1 Tax=Physco... 325 8e-87 UniRef50_UPI00016E17D4 UPI00016E17D4 related cluster n=2 Tax=Tet... 324 9e-87 UniRef50_D2QY10 Helicase domain protein n=1 Tax=Pirellula staley... 324 9e-87 UniRef50_D2M8T3 Helicase domain protein n=1 Tax=Rhodopseudomonas... 324 1e-86 UniRef50_P87114 Uncharacterized ATP-dependent helicase fft1 n=1 ... 324 1e-86 UniRef50_B1LDN7 Helicase family protein n=20 Tax=Bacteria RepID=... 323 2e-86 UniRef50_A2D9P9 F/Y-rich N-terminus family protein n=1 Tax=Trich... 322 3e-86 UniRef50_B0R0I6 Chromodomain-helicase-DNA-binding protein 8 n=1 ... 321 6e-86 UniRef50_Q54CF8 Chromo domain-containing protein n=1 Tax=Dictyos... 321 6e-86 UniRef50_A6FSF7 Helicase/SNF2 family domain protein n=1 Tax=Rose... 321 8e-86 UniRef50_Q9P2D1 Chromodomain-helicase-DNA-binding protein 7 n=26... 321 9e-86 UniRef50_D2YSY0 RNA polymerase-associated protein rapA n=1 Tax=V... 320 1e-85 UniRef50_UPI000175F9EE PREDICTED: similar to chromodomain helica... 319 3e-85 UniRef50_A3NZZ0 SNF2-related:Helicase, C-terminal n=4 Tax=Burkho... 318 5e-85 UniRef50_UPI0001C15DBC ATP-dependent helicase n=1 Tax=Cylindrosp... 318 6e-85 UniRef50_A9TQR2 SNF2 family chromodomain-helicase n=1 Tax=Physco... 318 7e-85 UniRef50_A1W7Y8 Helicase domain protein n=6 Tax=Proteobacteria R... 317 1e-84 UniRef50_B7XJ60 SWF/SNF family helicase n=1 Tax=Enterocytozoon b... 317 1e-84 UniRef50_Q8NSD7 Superfamily II DNA/RNA helicases, SNF2 family n=... 317 1e-84 UniRef50_A1U084 Helicase domain protein n=2 Tax=Bacteria RepID=A... 317 2e-84 UniRef50_D0W197 Helicase/SNF2 domain protein n=3 Tax=Proteobacte... 316 2e-84 UniRef50_D2VNB4 Helicase-like protein n=1 Tax=Naegleria gruberi ... 316 3e-84 UniRef50_A8M878 Helicase domain protein n=2 Tax=Actinomycetales ... 315 4e-84 UniRef50_Q3L8U1 Chromodomain-helicase-DNA-binding protein 9 n=47... 315 5e-84 UniRef50_UPI0001BC2D00 putative helicase n=1 Tax=Brevibacterium ... 315 5e-84 UniRef50_B9T918 ATP-dependent helicase, putative n=1 Tax=Ricinus... 315 8e-84 UniRef50_Q9NRZ9 Lymphoid-specific helicase n=68 Tax=Coelomata Re... 315 8e-84 UniRef50_UPI0001795D73 PREDICTED: similar to Chromodomain-helica... 314 1e-83 UniRef50_D0NVP0 Putative uncharacterized protein n=1 Tax=Phytoph... 314 1e-83 UniRef50_A2DTG9 F/Y-rich N-terminus family protein n=1 Tax=Trich... 314 1e-83 UniRef50_B2JBC5 Helicase domain protein n=4 Tax=Cyanobacteria Re... 313 2e-83 UniRef50_A4J1V5 Helicase domain protein n=1 Tax=Desulfotomaculum... 313 2e-83 UniRef50_D1HST8 Whole genome shotgun sequence of line PN40024, s... 313 2e-83 UniRef50_Q23KF5 Type III restriction enzyme, res subunit family ... 313 3e-83 UniRef50_C6WH64 Helicase domain protein n=3 Tax=Actinomycetales ... 313 3e-83 UniRef50_Q7XQJ0 OSJNBa0005N02.1 protein n=6 Tax=Magnoliophyta Re... 312 3e-83 UniRef50_Q5P8U4 Helicase/SNF2 family domain protein n=1 Tax=Arom... 312 4e-83 UniRef50_C4V724 Putative uncharacterized protein n=1 Tax=Nosema ... 312 4e-83 UniRef50_UPI00016E800D UPI00016E800D related cluster n=1 Tax=Tak... 312 4e-83 UniRef50_UPI0001C15F0A hypothetical protein CRC_01468 n=1 Tax=Cy... 312 4e-83 UniRef50_O74842 Uncharacterized ATP-dependent helicase fft2 n=6 ... 312 5e-83 UniRef50_Q3M125 Type III restriction enzyme, res subunit n=1 Tax... 312 5e-83 UniRef50_A9F4G9 Helicase, Snf2 family n=1 Tax=Sorangium cellulos... 311 6e-83 UniRef50_Q9V0B0 Putative DEAH ATP-dependent helicase n=1 Tax=Pyr... 311 7e-83 UniRef50_Q54Q16 Chromo domain-containing protein n=2 Tax=Eukaryo... 311 7e-83 UniRef50_A0C011 Chromosome undetermined scaffold_14, whole genom... 311 8e-83 UniRef50_A7VHM1 Putative uncharacterized protein n=6 Tax=Bacteri... 310 2e-82 UniRef50_A2DAM4 Type III restriction enzyme, res subunit family ... 310 2e-82 UniRef50_C8NCL6 Helicase/SNF2 domain protein n=1 Tax=Cardiobacte... 310 2e-82 UniRef50_A9TXL2 SWI/SNF class chromatin remodeling complex prote... 310 2e-82 UniRef50_Q5P890 Helicase (Snf2 family) n=10 Tax=Bacteria RepID=Q... 310 3e-82 UniRef50_C6IYV2 Non-specific serine/threonine protein kinase n=1... 309 3e-82 UniRef50_C6BED0 Helicase domain protein n=5 Tax=Proteobacteria R... 309 4e-82 UniRef50_Q8IJG6 Chromodomain-helicase-DNA-binding protein 1 homo... 308 6e-82 UniRef50_Q7QIL9 AGAP006945-PA n=3 Tax=Culicidae RepID=Q7QIL9_ANOGA 308 6e-82 UniRef50_A7HFJ5 Non-specific serine/threonine protein kinase n=1... 308 7e-82 UniRef50_B7G2T7 Imitation switch isoform 1, alias nucleosome rem... 307 1e-81 UniRef50_B3L200 SNF2-family protein, putative n=8 Tax=Eukaryota ... 307 1e-81 UniRef50_A2FI37 SNF2 family N-terminal domain containing protein... 307 1e-81 UniRef50_UPI000180C4B7 PREDICTED: similar to helicase, lymphoid-... 307 2e-81 UniRef50_A2DYG3 F/Y-rich N-terminus family protein n=1 Tax=Trich... 306 2e-81 UniRef50_C7MQ57 DNA/RNA helicase, superfamily II, SNF2 family n=... 306 2e-81 UniRef50_UPI00017928F7 PREDICTED: similar to DNA repair and reco... 306 2e-81 UniRef50_B9HP20 Chromatin remodeling complex subunit n=1 Tax=Pop... 306 3e-81 UniRef50_B6JZ54 ISWI chromatin-remodeling complex ATPase ISW2 n=... 306 4e-81 UniRef50_A2EPF9 Type III restriction enzyme, res subunit family ... 305 7e-81 UniRef50_UPI00016AD347 helicase, Snf2 family protein n=2 Tax=Pro... 304 1e-80 UniRef50_UPI000185C06D superfamily II DNA/RNA helicase, SNF2 fam... 304 1e-80 UniRef50_A2F9K3 F/Y-rich N-terminus family protein n=1 Tax=Trich... 304 1e-80 UniRef50_UPI000180CDBD PREDICTED: similar to helicase, lymphoid-... 303 2e-80 UniRef50_A2DZY5 SNF2 family N-terminal domain containing protein... 303 2e-80 UniRef50_A2ED18 SNF2 family N-terminal domain containing protein... 303 2e-80 UniRef50_B0W5L6 DNA repair and recombination protein RAD54 n=1 T... 303 2e-80 UniRef50_UPI0001C42EFF SNF2 helicase n=1 Tax=Bacillus pseudofirm... 303 3e-80 UniRef50_UPI00016929C4 SWF/SNF family helicase n=1 Tax=Paenibaci... 303 3e-80 UniRef50_P38144 ISWI chromatin-remodeling complex ATPase ISW1 n=... 303 3e-80 UniRef50_Q04692 SWI/SNF-related matrix-associated actin-dependen... 302 3e-80 UniRef50_A8KX63 Non-specific serine/threonine protein kinase n=3... 302 4e-80 UniRef50_Q256C0 Swi/snf family helicase 2 n=17 Tax=Chlamydiales ... 302 5e-80 UniRef50_Q5NA48 Os01g0881000 protein n=3 Tax=Oryza sativa RepID=... 302 5e-80 UniRef50_C9RKU0 SNF2-related protein n=1 Tax=Fibrobacter succino... 301 6e-80 UniRef50_UPI000186EE6A DNA repair and recombination protein RAD5... 301 7e-80 UniRef50_A5D5A2 Putative uncharacterized protein n=4 Tax=cellula... 301 9e-80 UniRef50_O30320 ATP-dependent RNA helicase HepA, putative n=1 Ta... 301 1e-79 UniRef50_Q5WEW1 SNF2 family DNA/RNA helicase n=1 Tax=Bacillus cl... 301 1e-79 UniRef50_O60264 SWI/SNF-related matrix-associated actin-dependen... 301 1e-79 UniRef50_A9UX01 Predicted protein n=1 Tax=Monosiga brevicollis R... 300 1e-79 UniRef50_B6AJB2 SNF2 family N-terminal domain-containing protein... 300 2e-79 UniRef50_C5KT21 Chromatin remodelling complex ATPase chain Iswi,... 299 3e-79 UniRef50_B0EGK4 DNA repair and recombination protein RAD54B, put... 299 4e-79 UniRef50_UPI00016E4BB0 UPI00016E4BB0 related cluster n=1 Tax=Tak... 299 4e-79 UniRef50_Q1NL49 SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/D... 299 4e-79 UniRef50_UPI0001926057 PREDICTED: similar to chromodomain helica... 299 4e-79 UniRef50_C7RM65 Non-specific serine/threonine protein kinase n=1... 298 7e-79 UniRef50_B9XEI0 Non-specific serine/threonine protein kinase n=1... 298 7e-79 UniRef50_B8L1P8 ATP-dependent helicase HepA n=2 Tax=Proteobacter... 298 8e-79 UniRef50_D1J338 Whole genome shotgun sequence of line PN40024, s... 298 8e-79 Sequences not found previously or not previously below threshold: UniRef50_UPI000180D3C0 PREDICTED: similar to chromodomain helica... 326 2e-87 UniRef50_Q54UZ8 Myb domain-containing protein n=1 Tax=Dictyostel... 325 6e-87 UniRef50_B7Z002 Kismet, isoform C n=2 Tax=Fungi/Metazoa group Re... 320 2e-85 UniRef50_UPI00006A0EF1 Chromodomain-helicase-DNA-binding protein... 320 2e-85 UniRef50_Q9VPL9 Kismet, isoform A n=10 Tax=Sophophora RepID=Q9VP... 320 2e-85 UniRef50_B4LU61 GJ17250 n=6 Tax=cellular organisms RepID=B4LU61_... 320 2e-85 UniRef50_Q29NV9 GA17619 n=5 Tax=Eukaryota RepID=Q29NV9_DROPS 318 7e-85 UniRef50_Q9HCK8 Chromodomain-helicase-DNA-binding protein 8 n=26... 316 2e-84 UniRef50_Q9Y620 DNA repair and recombination protein RAD54B n=36... 316 3e-84 UniRef50_A7RMN4 Predicted protein (Fragment) n=14 Tax=Eumetazoa ... 314 1e-83 UniRef50_Q5TQJ2 AGAP008482-PA (Fragment) n=94 Tax=cellular organ... 314 1e-83 UniRef50_A8Q392 Associated with TFs and helicases family protein... 314 1e-83 UniRef50_D2UX51 Chromodomain helicase DNA binding protein n=1 Ta... 314 1e-83 UniRef50_B6AJZ0 SNF2 family helicase, putative n=1 Tax=Cryptospo... 313 2e-83 UniRef50_B0ETQ4 Chromodomain helicase hrp1, putative n=2 Tax=Ent... 313 3e-83 UniRef50_A4S9B5 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 311 1e-82 UniRef50_A2QRG3 Contig An08c0130, complete genome n=9 Tax=Tricho... 310 1e-82 UniRef50_D0NE95 Chromodomain protein, putative n=1 Tax=Phytophth... 309 5e-82 UniRef50_A7SAK4 Predicted protein n=2 Tax=Eumetazoa RepID=A7SAK4... 308 6e-82 UniRef50_A0C3B5 Chromosome undetermined scaffold_147, whole geno... 308 8e-82 UniRef50_Q9XFH4 SWI2/SNF2-like protein n=22 Tax=Embryophyta RepI... 306 2e-81 UniRef50_Q7RM86 Chromodomain-helicase-DNA-binding protein, CHD-1... 306 2e-81 UniRef50_C4LZC7 Chromodomain-helicase-DNA-binding protein, putat... 306 3e-81 UniRef50_B9RSY8 Putative uncharacterized protein n=1 Tax=Ricinus... 305 8e-81 UniRef50_B9N3S4 Chromatin remodeling complex subunit n=4 Tax=Mag... 304 1e-80 UniRef50_C1E7E6 SNF2 super family n=2 Tax=Micromonas RepID=C1E7E... 304 1e-80 UniRef50_A0BRC7 Chromosome undetermined scaffold_122, whole geno... 303 3e-80 UniRef50_D0NGD8 Putative uncharacterized protein n=1 Tax=Phytoph... 303 3e-80 UniRef50_A9VAE6 Predicted protein n=1 Tax=Monosiga brevicollis R... 302 4e-80 UniRef50_D1HIU5 Whole genome shotgun sequence of line PN40024, s... 302 5e-80 UniRef50_C4LW36 Chromodomain-helicase-DNA-binding protein, putat... 302 5e-80 UniRef50_A8PYR2 Putative uncharacterized protein n=1 Tax=Malasse... 302 6e-80 UniRef50_Q8PWU7 SWF/SNF family helicase n=4 Tax=cellular organis... 301 6e-80 UniRef50_Q8TDI0 Chromodomain-helicase-DNA-binding protein 5 n=58... 301 6e-80 UniRef50_B0E0Y6 SNF2 family DNA-dependent ATPase n=1 Tax=Laccari... 301 9e-80 UniRef50_B6H510 Pc13g11770 protein n=2 Tax=Eurotiomycetidae RepI... 301 9e-80 UniRef50_Q19106 Protein F01G4.1, confirmed by transcript evidenc... 301 9e-80 UniRef50_Q12873 Chromodomain-helicase-DNA-binding protein 3 n=10... 301 1e-79 UniRef50_A2FNE0 SNF2 family N-terminal domain containing protein... 301 1e-79 UniRef50_C1DZK6 SNF2 super family n=2 Tax=Micromonas RepID=C1DZK... 300 2e-79 UniRef50_C4Y7P0 Putative uncharacterized protein n=1 Tax=Clavisp... 300 2e-79 UniRef50_Q656N0 Putative STH1 protein n=1 Tax=Oryza sativa Japon... 300 2e-79 UniRef50_A7ARU3 Chromo-helicase DNA-binding protein, putative n=... 300 2e-79 UniRef50_Q8SWP7 Similarity to CHROMODOMAIN HELICASE DNA-BINDING ... 299 3e-79 UniRef50_A5DXH8 SNF2-family ATP dependent chromatin remodeling f... 298 5e-79 UniRef50_B8J114 Non-specific serine/threonine protein kinase n=1... 298 6e-79 UniRef50_A9TI22 SNF2 family DNA-dependent ATPase (Fragment) n=2 ... 298 6e-79 UniRef50_UPI000186E785 lymphoid specific helicase, putative n=1 ... 298 7e-79 UniRef50_D0NZU0 Chromatin structure-remodeling complex subunit s... 298 8e-79 UniRef50_B8LC70 Chromodomain-helicase (Fragment) n=1 Tax=Thalass... 298 8e-79 >UniRef50_B7VIC2 RNA polymerase-associated protein rapA n=29 Tax=Gammaproteobacteria RepID=RAPA_VIBSL Length = 969 Score = 1162 bits (3007), Expect = 0.0, Method: Composition-based stats. Identities = 600/969 (61%), Positives = 771/969 (79%), Gaps = 3/969 (0%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F LGQRWISDTES+LGLGTVVA+DARTVT++F ++ ENR+YAR+D+PVTRV FN GD Sbjct: 1 MTFALGQRWISDTESDLGLGTVVAMDARTVTVMFAASEENRVYARTDAPVTRVAFNVGDV 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I +GW + VEEV E+ GLLTY+GTR DT+E+ V LRE+FL +++ F+KPQD+L+AGQI Sbjct: 61 IECQEGWSLSVEEVIEDKGLLTYLGTREDTQETEVTLREIFLSNQIRFNKPQDKLYAGQI 120 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DRMD F LRYRA +Q + P GL G R LIPHQL IAH+VGRRHAPRVLLADEVG Sbjct: 121 DRMDNFVLRYRALSNQYQQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG 180 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMI+HQQ+LSG AER+LI+VPETLQHQWLVEM+RRFNL F++FD+ER E+ Sbjct: 181 LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIESFA 240 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 ++ NPFDT+Q V+CSLDF R+S++R E E EWDLLVVDEAHHL WS+D PSREYQ +E Sbjct: 241 ESDNPFDTQQYVLCSLDFLRKSRKRYEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE 300 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 LAE+ GVLLLTATPEQLG ESHFARLRLLDP+RF+D+ FVEE+ Y PVADAV L Sbjct: 301 GLAENTSGVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEDQYAPVADAVTALF 360 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQS--ARQELVSMLMDRHGTSRVLF 418 +G KL N N + E++ EQD+EPL + DS + + ARQEL+ LMDRHGT RVLF Sbjct: 361 SGVKLENSAKNQITELLSEQDVEPLFRVIEGDSSEEEQALARQELIDNLMDRHGTGRVLF 420 Query: 419 RNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 RNTR +KGFPKR ++ + + +PTQY T+++VSG++G + + E RA MLYPE I+QEFE Sbjct: 421 RNTRAAIKGFPKRNVNLLPMDIPTQYTTSMRVSGMIGGKMAPEARAMKMLYPEEIFQEFE 480 Query: 479 GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 G++++WW FD RV WL+ + RS+K+LVI ++A+TALQLEQ LREREG+RA VFHEGM Sbjct: 481 GEDSSWWQFDSRVNWLIEKIQDKRSEKILVIASRASTALQLEQALREREGVRATVFHEGM 540 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 SI+ERD+AAA+FA+E+ GAQVL+CSEIGSEGRNFQFA+ +VMFDLPFNPDLLEQRIGRLD Sbjct: 541 SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD 600 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ DI IHVPYL+ T+Q++L RW+ EGL+AF TCPTGRT+YD + LI LAS Sbjct: 601 RIGQLRDIDIHVPYLKGTSQAILARWFDEGLNAFAETCPTGRTVYDKYSDVLIEMLASG- 659 Query: 659 QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF 718 TE D++I+ + +++LK+ LE+GRDRLLE+HSNGG+KA +AE I D DTNL+ F Sbjct: 660 NTEQLDEVIEESAKLNQSLKSDLEKGRDRLLEMHSNGGDKAHEIAEKIASTDGDTNLVTF 719 Query: 719 AMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFIT 778 A++LFD IG+NQDD+G+N +V+TPS+HM+VP +PGL +G TITFDRE AL+RED FI+ Sbjct: 720 ALSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRETALSREDMNFIS 779 Query: 779 WEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPP 838 WEHP+I+ G+DL+LS G+S +SLLKNKALPVGT+L+EL+Y+V+AQAPK+ +++FLP Sbjct: 780 WEHPMIQGGIDLLLSEGVGASAVSLLKNKALPVGTILLELVYLVDAQAPKRSGISQFLPK 839 Query: 839 TPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKS 898 TP+R+++D GN+L+AQVEF++FNRQL+ VNRH SKLVN+VQ ++H +++ GE + Sbjct: 840 TPIRLMMDGRGNDLSAQVEFDSFNRQLSPVNRHLASKLVNSVQGEIHKLIEAGETHVLPK 899 Query: 899 ARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLD 958 + A+ + L+ EL RL+AL+AVNPNIRD+EL IE+ ++ + +A +LD Sbjct: 900 VEEVRQQAQKDMQTNLNGELERLQALKAVNPNIRDEELEVIEAQINELTGYISKAQVQLD 959 Query: 959 ALRLIVVTH 967 +LRLIVV+H Sbjct: 960 SLRLIVVSH 968 >UniRef50_A7MSB2 RNA polymerase-associated protein rapA n=212 Tax=Gammaproteobacteria RepID=RAPA_VIBHB Length = 969 Score = 1154 bits (2986), Expect = 0.0, Method: Composition-based stats. Identities = 606/969 (62%), Positives = 772/969 (79%), Gaps = 3/969 (0%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F LGQRWISDTES+LGLGTVVA+DARTVTL+F ++ ENR+YAR+D+PVTRV FN GD Sbjct: 1 MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFAASEENRVYARNDAPVTRVTFNVGDV 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I +GW ++VEEV E+ GL TY GTR DT+E+ + LRE+FL + + F+KPQD+L+AGQI Sbjct: 61 IDCQEGWSLKVEEVLEDEGLYTYFGTREDTQETAIVLREIFLSNHIRFNKPQDKLYAGQI 120 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DRMD F LRYRA + EQ + P GL G R LIPHQL IAH+VGRRHAPRVLLADEVG Sbjct: 121 DRMDNFVLRYRALQNQFEQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG 180 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMI+HQQ+LSG AER+LI+VPETLQHQWLVEM+RRFNL F++FD+ER EA Sbjct: 181 LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA 240 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 +A NPFDT+Q V+CSLDF R+S++R E E EWDLLVVDEAHHL WS+D PSREYQ +E Sbjct: 241 EAENPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE 300 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 LAE GVLLLTATPEQLG ESHFARLRLLDP+RF+D+ FVEE++ Y PVADA+ L Sbjct: 301 GLAERTAGVLLLTATPEQLGRESHFARLRLLDPDRFYDYDAFVEEEEQYAPVADAITSLF 360 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQS--ARQELVSMLMDRHGTSRVLF 418 +G KL ++ N + E++ EQD+EPL + SDS++ ARQEL+ LMDRHGT RVLF Sbjct: 361 SGEKLPDEAKNQITELLSEQDVEPLFRIIESDSDEEAKASARQELIDNLMDRHGTGRVLF 420 Query: 419 RNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 RNTR +KGFPKR +H + + +P QY T+++VSG++G + + E RA LYPE I+QEFE Sbjct: 421 RNTRAAIKGFPKRNVHLMPMDIPQQYTTSMRVSGMIGGKMTPEARAVKNLYPEEIFQEFE 480 Query: 479 GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 G++++WW FD RV WL+ + RS KVLVI ++A+TALQLEQ LREREGIRA VFHEGM Sbjct: 481 GEDSSWWQFDSRVNWLLEKVKEKRSDKVLVIASRASTALQLEQALREREGIRATVFHEGM 540 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 SI+ERD+AAA+FA+E+ GAQVL+CSEIGSEGRNFQFA+ +VMFDLPFNPDLLEQRIGRLD Sbjct: 541 SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD 600 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ DI IHVPYL+ T+Q++L RW+ EGL+AF TCPTGR +YD + LI LAS D Sbjct: 601 RIGQKRDIDIHVPYLKDTSQAILARWFDEGLNAFAETCPTGRAVYDKYSDALIEMLASGD 660 Query: 659 QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF 718 + D++I+ + ++ LK+QLEQGRDRLLE+HSNGGEKAQ + E I D DTNL+ F Sbjct: 661 VSN-LDEVIEESAKMNKELKSQLEQGRDRLLEMHSNGGEKAQQIVEKISSTDGDTNLVTF 719 Query: 719 AMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFIT 778 A++LFD IG+NQDD+G+N +V+TPS+HM+VP +PGL +G TITFDR+ AL+RED FI+ Sbjct: 720 ALSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMHFIS 779 Query: 779 WEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPP 838 WEHP+I+ G+DL++S G+S +SLLKNKALPVGT+L+EL+Y V+AQAPK+ + RFLP Sbjct: 780 WEHPMIQGGIDLLMSEGVGTSAVSLLKNKALPVGTILLELVYAVDAQAPKRSGITRFLPK 839 Query: 839 TPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKS 898 TP+RM++D GN+L+ QVEFE FNRQL+ VNRH GSKLV +VQ+D+H++++ G+A +E+ Sbjct: 840 TPIRMMMDARGNDLSPQVEFEGFNRQLSPVNRHLGSKLVTSVQKDIHSLIEAGDALVEQK 899 Query: 899 ARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLD 958 + A + + L+AEL RL+AL+AVNPNIRD+E+ +IE +++ ++QA +LD Sbjct: 900 VEEVRKQAHQDMQQSLNAELERLQALKAVNPNIRDEEIESIEEQIKELTGYINQAQVQLD 959 Query: 959 ALRLIVVTH 967 +LRLIVV+H Sbjct: 960 SLRLIVVSH 968 >UniRef50_A1RFP5 RNA polymerase-associated protein rapA n=21 Tax=Gammaproteobacteria RepID=RAPA_SHESW Length = 968 Score = 1116 bits (2886), Expect = 0.0, Method: Composition-based stats. Identities = 558/970 (57%), Positives = 749/970 (77%), Gaps = 6/970 (0%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 MPF LGQRWISDTESELGLGTVV V+ R VT+LFP+TGENR+++R+++P+TRV +NPGDT Sbjct: 1 MPFALGQRWISDTESELGLGTVVQVEGRMVTVLFPATGENRMFSRAEAPLTRVTYNPGDT 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 + SH+GW + +E++ E++GL+ Y G +T E V LRE L+ + F+KPQDRLFAGQI Sbjct: 61 VESHEGWSLTIEDLTEKDGLVIYHGIHSETGEQ-VTLRETLLNHNIRFNKPQDRLFAGQI 119 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DR+DRF +RY+ + + GL+G R LIPHQ+ IAH+VGRR+APRVLLADEVG Sbjct: 120 DRLDRFGVRYQCQMLRHKLATSDLLGLQGPRVGLIPHQMWIAHEVGRRYAPRVLLADEVG 179 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAG+I+HQQLL+G AERVL+IVP+TL+HQWLVEMLRRFNLRF++FD++R EA Sbjct: 180 LGKTIEAGLIIHQQLLTGRAERVLVIVPDTLRHQWLVEMLRRFNLRFSVFDEDRCVEAYA 239 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 D NPF TEQLVICSL+ R+ K+RL+ +A+WDLLVVDEAHHL W+E+APSR YQ +E Sbjct: 240 DHDNPFYTEQLVICSLELLRK-KKRLDQALDADWDLLVVDEAHHLEWTEEAPSRAYQVVE 298 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 L+E VPGVLLLTATP+QLG ESHFARLRLLDP+RF+D+ F+ E+ +Y+ VA A L Sbjct: 299 ALSEVVPGVLLLTATPDQLGHESHFARLRLLDPDRFYDYDAFLAEENSYKDVAIAAEALA 358 Query: 361 AGNKLSNDELNMLGEMIGEQDIEP---LLQAANSDSEDAQSARQELVSMLMDRHGTSRVL 417 KL + +N L E++ E+DI P L+QA DS+ Q+AR EL+ L+DRHGT RVL Sbjct: 359 GNAKLPDAAINSLTELLSEKDIAPSIRLIQADGIDSDVQQAARSELLQELLDRHGTGRVL 418 Query: 418 FRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEF 477 +RN+R VKGFPKR + +P QY TA +VS +MG K+ E +A L PE++YQEF Sbjct: 419 YRNSRASVKGFPKRFFNPHPQTMPEQYLTAARVSSMMGGHKTLEAKAAQALSPEKLYQEF 478 Query: 478 EGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEG 537 E ++A+WW FDPRV+WL+ +L SHRS+KVL+I ++A TAL LE+ LR REGI+A VFHEG Sbjct: 479 EDNSASWWKFDPRVDWLIAFLKSHRSKKVLIIASQAETALSLEEALRTREGIQATVFHEG 538 Query: 538 MSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL 597 MSIIERD+A A+FA+E+ GAQ L+CSEIGSEGRNFQFASH+V+FDLP NPDLLEQRIGRL Sbjct: 539 MSIIERDKAGAYFAQEEGGAQALICSEIGSEGRNFQFASHLVLFDLPLNPDLLEQRIGRL 598 Query: 598 DRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASP 657 DRIGQ +DIQIH+PYLE TAQ L++WYH+GL+AFE TCP+G +Y DL+N L Sbjct: 599 DRIGQKNDIQIHLPYLEDTAQERLMQWYHQGLNAFELTCPSGHVLYAEFAEDLLNVLVGD 658 Query: 658 DQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIA 717 D E +L+ + + +++ LK +EQGRD+LLEI+S+GG++A+A+ E + + D++T LI Sbjct: 659 DADE-LTNLLNHTQSRYKELKHAMEQGRDKLLEINSHGGDRAKAIVERLAQNDENTQLIG 717 Query: 718 FAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFI 777 + L+DIIG++Q+D+G+N I+L PS+HM+ P +PGL EDG+T+TFDR+ AL+R+D I Sbjct: 718 SVIRLWDIIGVDQEDKGENSIILRPSEHMMFPTYPGLPEDGVTVTFDRDTALSRDDIALI 777 Query: 778 TWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLP 837 T EHPL++ GLDLI +TG++++++LKNKALP GTL +ELIY+ +A APK QL R+LP Sbjct: 778 TQEHPLVQTGLDLITGSETGTTSVAVLKNKALPAGTLFLELIYMADASAPKSSQLYRYLP 837 Query: 838 PTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEK 897 PTP+R+LLDKNGN+L+A+V++ +F++QL+AVNRH G KLV A Q +H + GE + Sbjct: 838 PTPIRILLDKNGNDLSAKVDYASFDKQLSAVNRHIGGKLVTASQPILHPLFAKGEEYAQA 897 Query: 898 SARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRL 957 + L+ AR + +L+ EL RLE+L+AVNPNIR++EL + + Q++ LD + +L Sbjct: 898 AVDELVIQAREKMTTQLTGELDRLESLKAVNPNIREEELEYLRNQMQELNTYLDASQLQL 957 Query: 958 DALRLIVVTH 967 DA+R+++V+H Sbjct: 958 DAIRMVLVSH 967 >UniRef50_A3MZ32 RNA polymerase-associated protein rapA n=32 Tax=Gammaproteobacteria RepID=RAPA_ACTP2 Length = 969 Score = 1090 bits (2819), Expect = 0.0, Method: Composition-based stats. Identities = 555/977 (56%), Positives = 714/977 (73%), Gaps = 18/977 (1%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 F +GQRWIS++E+ LGLG V A D RTVT+ FP+ E R+YA S +P+TRV F GD I Sbjct: 1 MFVVGQRWISESENNLGLGIVTASDNRTVTIQFPAAEEERIYALSVAPLTRVQFQKGDRI 60 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 S +GWQ+ VEEV E G + Y+G R D+ E V L E+ LD K+ FSKPQDRLF+ QID Sbjct: 61 NSVEGWQLDVEEVVENQGFIIYLGKRADSGEEAV-LPEMQLDHKVSFSKPQDRLFSAQID 119 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 R DRFALRYRA ++ QF+ P G+RG R SLIPHQL+IA +VG+R APRVLLADEVGL Sbjct: 120 RSDRFALRYRALQHQQAQFQSPLRGMRGIRASLIPHQLHIAKEVGQRVAPRVLLADEVGL 179 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEAGMIL QQL SG ERVL++VPE+LQHQWLVEMLRRFNL+F+LFD+ER ++ Sbjct: 180 GKTIEAGMILQQQLFSGRVERVLVLVPESLQHQWLVEMLRRFNLKFSLFDEERCSDFDKA 239 Query: 242 -------AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSR 294 + NPFD+E LVI S+D+ S R + + + WD+L+VDEAHHL WSE+ PS Sbjct: 240 DEDGNDVSENPFDSEALVIASIDWLESSPNRAKQVLASHWDMLIVDEAHHLAWSENEPSV 299 Query: 295 EYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVAD 354 YQ +E+L++ P VLLLTATPEQLG ESHFARL LLD +RF+D+ F+ EQK+Y+PVAD Sbjct: 300 GYQFVERLSKQTPAVLLLTATPEQLGQESHFARLALLDADRFYDYHSFIAEQKDYKPVAD 359 Query: 355 AVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSE---DAQSARQELVSMLMDRH 411 AVA LL LS+DE N + E++ E+D EP+ + NS+ D RQEL+ L+DRH Sbjct: 360 AVATLLNDKPLSHDEQNSIAELLSEKDTEPMFKVINSEKSKENDRLQVRQELIRELIDRH 419 Query: 412 GTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE 471 GTSRVLFRNTR GVKGFP R H I L +P+QY A+KV G+MG D LYPE Sbjct: 420 GTSRVLFRNTRQGVKGFPHRVYHQITLEMPSQYTNALKVMGMMGGVTK-----DDQLYPE 474 Query: 472 RIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRA 531 R++Q A W +FDPR+EWL+ +L +HR +K+LVIC +A TA+ LEQ+LRERE IR+ Sbjct: 475 RLFQRM-NPAAKWADFDPRIEWLITFLKNHRDEKILVICKQADTAIALEQILREREAIRS 533 Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLE 591 AVFHE MSI+ERDRA+A+FA+ + GAQVL+ S IGSEGRNFQFAS++V+F+LP NPDLLE Sbjct: 534 AVFHEKMSIVERDRASAYFAQMEEGAQVLISSSIGSEGRNFQFASNLVLFNLPDNPDLLE 593 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI 651 Q IGRLDRIGQ +DIQIHVP E + Q VL WYH+GL+AFE TCP G ++ +L Sbjct: 594 QSIGRLDRIGQKNDIQIHVPCFENSMQMVLATWYHQGLNAFEETCPMGAALFREFGEELE 653 Query: 652 NYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDD 711 +L +P Q GFD+ + ++ + LKA+LEQGRDRLLE++SNGGE AQALAE+I ++D+ Sbjct: 654 GFLKNP-QAVGFDEFLVRTFKRQQQLKAELEQGRDRLLELNSNGGEVAQALAEAIAKEDN 712 Query: 712 DTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAR 771 + +L+ FA++LFD+IG+ Q+D G+ IV++P+ HMLVPDFPG++ED T+TFDR++AL R Sbjct: 713 NPHLVNFALSLFDVIGLEQEDLGEQSIVISPTGHMLVPDFPGIAEDSTTVTFDRQLALMR 772 Query: 772 EDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQ 831 ED +F+TW+HP+IRNG+DLI SGD G S ISLL NK LP GTLL+E IY+VE QAPK L Sbjct: 773 EDVEFLTWDHPMIRNGIDLITSGDIGKSAISLLINKHLPAGTLLLEAIYMVETQAPKGLN 832 Query: 832 LNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLG 891 L RFLPPTPVR+LL GN++AAQV F +QL VN+ +K+ Q D+ ++ + Sbjct: 833 LTRFLPPTPVRILLGNKGNDMAAQVSFTGLEKQLKPVNKQMANKIAKMAQADIKKLIDIS 892 Query: 892 EAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLD 951 E +I LI+ A +AD LSAEL RL +L+AVN NIR DE+ A+E R + ++ + Sbjct: 893 EQKIAAKLPELIEKASQDADSTLSAELYRLTSLQAVNKNIRADEIEALEQQRIESLKQIA 952 Query: 952 QAGWRLDALRLIVVTHQ 968 A WRLD+LR+IV + Sbjct: 953 LANWRLDSLRVIVSNKE 969 >UniRef50_C6AQR6 RNA polymerase-associated protein RapA (ATP-dependenthelicase hepA) n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6AQR6_AGGAN Length = 952 Score = 1048 bits (2711), Expect = 0.0, Method: Composition-based stats. Identities = 505/972 (51%), Positives = 670/972 (68%), Gaps = 24/972 (2%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F +GQRWIS+TE+ LGLG + AVD R VT+ FP+ E R+YA +P++RV F GD Sbjct: 1 MAFAIGQRWISETENNLGLGVISAVDFRQVTIDFPAAQEQRIYAVQSAPLSRVQFRLGDQ 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 + +GW +V V E NGLL Y+ ++ + E+ L ++ FS+PQ+RLF QI Sbjct: 61 VQHIEGWHGEVTNVAENNGLLFYLVQPQAGQDR--VVSEMELAHRISFSRPQERLFFAQI 118 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DR + F LRY A +Y QF+ P GLRG LIPHQL+IA + G+R PRVLLADEVG Sbjct: 119 DRNEHFVLRYHALQYQKAQFQSPLRGLRGIHAGLIPHQLHIAKEAGQRVTPRVLLADEVG 178 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAE--- 237 LGKTIEAGMIL QQL + RVLIIVPETLQHQWLVEMLRRFN F+LFD+ER A+ Sbjct: 179 LGKTIEAGMILQQQLFAEKVRRVLIIVPETLQHQWLVEMLRRFNFHFSLFDEERCADFAA 238 Query: 238 -AQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREY 296 + NPF TE L+IC+LD+ + QR++ L AE+D+L+ DE HHL++ E PS EY Sbjct: 239 TEDREEVNPFTTESLIICALDWLVQHPQRVQQLLAAEFDMLIADEVHHLLYDEINPSLEY 298 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAV 356 Q ++QL + +P VLLLTATPEQLG +SHFARL LLDP+RFHD+ F+EEQ++Y+P+A+A Sbjct: 299 QLVQQLTQQIPAVLLLTATPEQLGQQSHFARLNLLDPHRFHDYRAFLEEQQHYQPIAEAA 358 Query: 357 AMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRV 416 LLA LS E N + ++GE D + ++ L+ L+DRHGT R+ Sbjct: 359 QSLLANKPLSAVEKNKISALLGE------------DINFNGTNKETLIKQLIDRHGTGRL 406 Query: 417 LFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQE 476 LFRNTR V+GFPKR + I LP P QY+ AIK R E + LYPE +E Sbjct: 407 LFRNTRQSVQGFPKRIYYPIALPQPKQYENAIKT-----LRAFDEHPVQCALYPEHFMRE 461 Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 + A WW FDPRV+WL+ +L HR +KV VIC A TA+QLEQ+LRE+EGIR+AVFHE Sbjct: 462 LNANTA-WWEFDPRVQWLIDFLKQHRQEKVFVICRYAGTAIQLEQILREKEGIRSAVFHE 520 Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 MSI+ERDRAAA+F +++ AQVLL S IGSEGRNFQFAS +V+F+LP NPDLLEQ IGR Sbjct: 521 KMSIVERDRAAAYFTQQENAAQVLLSSNIGSEGRNFQFASRLVLFNLPENPDLLEQCIGR 580 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS 656 LDRIGQ DIQI++PY AQ+ L WYH GL+AF TCP G +++ L L + Sbjct: 581 LDRIGQTKDIQIYLPYFTDGAQATLADWYHLGLNAFNETCPMGALLFEQFGEALQKTLEN 640 Query: 657 PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLI 716 P E LI++ +++ LK LEQGRD LLE++SNGGE A+ LA+ I QD L+ Sbjct: 641 PTALEAQKALIEHTQQERLRLKQLLEQGRDLLLELNSNGGESAKQLAQEIAAQDGSPELV 700 Query: 717 AFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQF 776 FA+NLFD+IG+ Q+D G+ IV+TP+ MLVP+FPGL E+G+T+TFDR++ALARE+ +F Sbjct: 701 DFALNLFDVIGVEQEDLGEKSIVITPTGTMLVPEFPGLKEEGVTVTFDRQLALAREELEF 760 Query: 777 ITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFL 836 +TW+HP+I +G+DLI SGD G S ++LL NK LP GTLL+EL+YVVE QAP+ LQL RFL Sbjct: 761 LTWDHPMIYHGIDLITSGDIGKSAVALLPNKHLPAGTLLLELVYVVETQAPQGLQLTRFL 820 Query: 837 PPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIE 896 PPTP+R+LLD GN+LA QV F+ R+L ++R+ +K+ ++ ++ ++ GE + Sbjct: 821 PPTPIRLLLDSKGNDLAQQVVFDHLQRKLKPMDRNMANKVAKMLRPNIETLITQGEKVMA 880 Query: 897 KSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWR 956 + ++ +I A +A + L EL+RL ALR VN NIR DE+ +++ R+Q+++ L QA WR Sbjct: 881 QQSKEIIANAEQQARQHLDEELTRLIALRKVNKNIRQDEIDTLQTQRKQMLQCLQQATWR 940 Query: 957 LDALRLIVVTHQ 968 LD LR+IV + Sbjct: 941 LDCLRVIVTNKE 952 >UniRef50_A5UAT0 RNA polymerase-associated protein rapA n=16 Tax=Haemophilus influenzae RepID=RAPA_HAEIE Length = 923 Score = 1026 bits (2653), Expect = 0.0, Method: Composition-based stats. Identities = 508/971 (52%), Positives = 682/971 (70%), Gaps = 51/971 (5%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 MPF +GQRW+S++E+ LGLG + A+D RTVT+ FP+ E R+YA + +P++R++F+ G+T Sbjct: 1 MPFAIGQRWLSESENALGLGVITALDQRTVTIYFPAADETRIYAIAQAPLSRIVFSKGET 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 ++ GWQ ++ +V+ NGLL Y+ + ++ V ++E + + FS+ +DRLF+ QI Sbjct: 61 LSHQAGWQGEILDVQNMNGLLFYLVK--NPQDEDVIVQERDISPIISFSQAKDRLFSAQI 118 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DR FALRYR + QF+ P GLRG R LIPHQL+IA +VG R PRVLLADEVG Sbjct: 119 DRSTHFALRYRTLCHQQAQFKSPLRGLRGTRAGLIPHQLHIAAEVGNRVNPRVLLADEVG 178 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMIL QL + +RVLIIVPETLQHQWLVEMLRRFNL FALFD+ER + Sbjct: 179 LGKTIEAGMILQNQLFAEKVQRVLIIVPETLQHQWLVEMLRRFNLHFALFDEERCNDFDL 238 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 DA NPF TE L+ICSL++ R+E +A++D L+VDEAHHLVWSE +PS Y +E Sbjct: 239 DAVNPFTTESLIICSLNWLETHPNRVEQALDAQFDCLIVDEAHHLVWSETSPSAAYLFVE 298 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 QLA +P VLLLTATPEQLG ESHFARLRLLDP RF D+ FV+EQ++Y+PV +AV LL Sbjct: 299 QLARIIPSVLLLTATPEQLGQESHFARLRLLDPERFFDYQTFVKEQEHYQPVVNAVESLL 358 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAA-NSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 A LS E N + +++ EQD+EPL +A +++ E+ Q ARQEL+ L+DRHGT R+LFR Sbjct: 359 ANKALSAVEKNHISDLLLEQDVEPLFKAIASNNDEEQQRARQELIQALIDRHGTGRMLFR 418 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 NTR GVKGFP R H I L Sbjct: 419 NTRQGVKGFPHRVYHQITLS---------------------------------------- 438 Query: 480 DNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMS 539 + +++WL+ +L HR +K+ VIC AATA+QLEQ+LRERE IRAAVFHE MS Sbjct: 439 ------EENDKIDWLIDFLKLHRDEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMS 492 Query: 540 IIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDR 599 IIERDRAAA+FA+ + GAQVLL S IGSEGRNFQFA+++V+FDLP NPDLLEQ IGRLDR Sbjct: 493 IIERDRAAAYFADLENGAQVLLSSSIGSEGRNFQFAANLVLFDLPTNPDLLEQCIGRLDR 552 Query: 600 IGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINY--LASP 657 IGQ D+QI++P + + QS L RWY+EGL+AFE TCP G ++ ++L ++ Sbjct: 553 IGQKRDVQIYMPCAKDSPQSRLARWYNEGLNAFEQTCPMGMALFSQFADELEKVRSNSTA 612 Query: 658 DQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIA 717 F L+K + E LK +LE+GRDRLLE++S+GGE+AQALA+ I ++D+ L+ Sbjct: 613 LSENEFSGLLKQTKTAREKLKIELEKGRDRLLELNSHGGEQAQALADQIADEDNSPELVN 672 Query: 718 FAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFI 777 FA+ LFDIIG+ Q+D G N IV++P+ MLVPDFPGL E+G+T+TFDRE+ALARE+ +F+ Sbjct: 673 FALKLFDIIGVEQEDLGANSIVISPTGTMLVPDFPGLKEEGVTVTFDRELALAREEMEFL 732 Query: 778 TWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLP 837 TW+HP+IR G+DL+ SGD G + ++LL NK LP GTLL+ELIYVVE+Q+PK LQLNRFLP Sbjct: 733 TWDHPMIRQGIDLVASGDIGKAAMALLVNKQLPAGTLLIELIYVVESQSPKGLQLNRFLP 792 Query: 838 PTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEK 897 PTP+R+LLD GNN+ QV FET + +L + ++ +++V + ++ +++ G+ ++ Sbjct: 793 PTPIRLLLDNKGNNMGEQVAFETLHSKLKPLGKNIANQMVKMARSNIESLITRGDQLVKS 852 Query: 898 SARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRL 957 A +I A+N+AD++LSAE++RL+ALRAVN NIR E+ +E R Q ++ L +A WRL Sbjct: 853 LAEPIIAEAKNQADQQLSAEINRLQALRAVNKNIRQSEIDILEQQRTQSLDELSKANWRL 912 Query: 958 DALRLIVVTHQ 968 D LR+IV + Sbjct: 913 DCLRVIVTNKE 923 >UniRef50_B3PHI1 RNA polymerase-associated protein HepA n=2 Tax=Gammaproteobacteria RepID=B3PHI1_CELJU Length = 977 Score = 1012 bits (2617), Expect = 0.0, Method: Composition-based stats. Identities = 448/989 (45%), Positives = 611/989 (61%), Gaps = 42/989 (4%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 F +GQRWIS+ E +LGLG V+ V R +TL FP+ GE R YA ++PV+RV + G+T+ Sbjct: 5 QFVIGQRWISEAEVDLGLGIVLDVANRRLTLSFPAAGERRTYALDNAPVSRVKYEVGETV 64 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 DG ++++ ++ E+ G L Y+G D EE A+ E LDS + FS P++RLFAGQID Sbjct: 65 RHQDGTRIKITKIVEQAGCLMYVGLTKDQEE--FAIPEFELDSFVQFSTPRERLFAGQID 122 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 + + F LRY+ Y + PY GL G R L+PHQL IA +V +RHAPRVLLADEVGL Sbjct: 123 KHEHFFLRYQTLHYQHQHRHSPYFGLAGPRVQLLPHQLYIAGEVAQRHAPRVLLADEVGL 182 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY------ 235 GKTIEAG++LHQQLLSG +R LI+VP +LQHQWLVEMLRRFNL F L D+ R Sbjct: 183 GKTIEAGLVLHQQLLSGRIKRALIVVPASLQHQWLVEMLRRFNLSFTLLDEARCNALVGL 242 Query: 236 ----------------AEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVV 279 E + ++ NPF++ QLV+CSLDF + R + A WDLL+V Sbjct: 243 DSQEESVDYVDDFEDDTEHRANSENPFESAQLVLCSLDFLTDNPVRYQQAVAAGWDLLLV 302 Query: 280 DEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDF 339 DEAHHL WS S Y IE LA G+LLLTATPEQLG+ESHFARLRLLDP+R++D Sbjct: 303 DEAHHLQWSPGHVSAAYACIEGLARVARGLLLLTATPEQLGLESHFARLRLLDPDRYYDL 362 Query: 340 AQFVEEQKNYRPVADAVAMLLAGNKLSNDELN--MLGEMIGEQDIEPLLQAANSDSEDAQ 397 F EQ++Y+P+ D V LL L+ +G + G + L+Q + D+ Sbjct: 363 DAFKAEQQSYKPLNDLVQDLLQARDADAGTLSDSQVGALKGYLPVGTLVQLKQQIASDSF 422 Query: 398 S-ARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGA 456 + A ++ L+DRHGT RVLFRNTRN V GFP R+LH L L Q + + Sbjct: 423 ASAVDTAITCLLDRHGTGRVLFRNTRNSVSGFPGRQLHGYALDLGDDEQAFVDQPLVAQI 482 Query: 457 RKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATA 516 R E + A WW D RV WL +L ++ +KVLVICA A TA Sbjct: 483 RA------------ETFWH--SKTQADWWLQDGRVTWLADWLKQNKRKKVLVICASADTA 528 Query: 517 LQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFAS 576 LE+ LR R+GI +VFHE MS+IERDR+AA+FA+ + GAQVL+CSEIGSEGRNFQFA Sbjct: 529 QTLEEYLRLRKGILTSVFHEHMSLIERDRSAAYFADLEEGAQVLICSEIGSEGRNFQFAQ 588 Query: 577 HMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC 636 +V+FDLP NPDLLEQRIGRLDRIGQ + IHVP+ TAQ+ L+ WYH+GL+AFE TC Sbjct: 589 DLVLFDLPINPDLLEQRIGRLDRIGQTGTVNIHVPFFRGTAQARLLDWYHQGLNAFEKTC 648 Query: 637 PTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGG 696 G+ +Y ++L+ L + + F+ L+ R +AL QL+QGRDRLLE++S Sbjct: 649 AIGQAVYSRFADELLPALVG-QEPQVFEALLSTTRAHAQALLEQLQQGRDRLLELNSCKP 707 Query: 697 EKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSE 756 ++AQ L +++ + D L + ++FD GI+ D ++ +VL PSDHM + FPGL E Sbjct: 708 QQAQQLVDALADNDQHPALANYMESVFDCFGIDMDRHSEHSLVLHPSDHMRIEQFPGLPE 767 Query: 757 DGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLV 816 G+TIT+ R+ AL+RED QF+TWEHPL+R DLI+ + G++ LK L G LLV Sbjct: 768 SGLTITYQRQQALSREDMQFLTWEHPLVRGAQDLIVLSEFGNTAFCTLKLPPLKPGNLLV 827 Query: 817 ELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKL 876 E ++V+ AP +LQL+RF+P + +R+LLD G +L+A + +R + V R+ +L Sbjct: 828 EALFVLHCPAPAELQLSRFIPQSVIRVLLDDKGKDLSAVLNVAQLSRLVQKVPRNNAQEL 887 Query: 877 VNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDEL 936 V + + I+ E + + LI+ A+ L+ E+ RL+AL VNPN+R +E+ Sbjct: 888 VRHARPQLTEIIHKAEQVTQANQAGLIENAKAAVATHLNTEIDRLKALAEVNPNVRQEEI 947 Query: 937 TAIESNRQQVMESLDQAGWRLDALRLIVV 965 ++ L A RLD+LR+++ Sbjct: 948 QYLQERLAASQHFLGLAKVRLDSLRVVMT 976 >UniRef50_Q2SC88 Superfamily II DNA/RNA helicase, SNF2 family n=2 Tax=Gammaproteobacteria RepID=Q2SC88_HAHCH Length = 967 Score = 1007 bits (2604), Expect = 0.0, Method: Composition-based stats. Identities = 443/979 (45%), Positives = 595/979 (60%), Gaps = 33/979 (3%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 F +GQRWIS+TE ELGLG + D R +T+ FP+ E R Y+ +++P++RV + GD + Sbjct: 8 NFVIGQRWISNTEPELGLGIITENDNRRITISFPAATEQRTYSAANAPLSRVQYQVGDNV 67 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 + +D + V V E+ G L Y LD + V L E+ L S + F P+DRLF+GQ+D Sbjct: 68 SDNDEKKYTVAGVIEQQGYLIYEA--LDEKGRKVDLPELELSSFVHFVSPKDRLFSGQVD 125 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 ++ + LR Y + Q GL G R L+PHQ+ IA++V RHAPRVLLADEVGL Sbjct: 126 KLSSYLLRQETLGYQTRQQATQGYGLMGARVQLLPHQMYIANEVAHRHAPRVLLADEVGL 185 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY-AEAQH 240 GKTIEAG+ILH QLLSG A+RVLI+VPE+L HQWLVEMLRRFNL+F++ D+ER A + Sbjct: 186 GKTIEAGLILHHQLLSGRAQRVLIVVPESLLHQWLVEMLRRFNLQFSILDNERCEALTES 245 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 NPF+ QLV+CSL+F + Q EH A+WD+LVVDEAHHL WS + S Y IE Sbjct: 246 GEENPFECSQLVLCSLNFITDNDQWREHALNAQWDMLVVDEAHHLEWSPEQQSPAYSHIE 305 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 LA+ PG+LLLTATPEQLG+ESHFARLRLLDP R+HD +F EE+ Y+PV D V LL Sbjct: 306 ALAQKAPGLLLLTATPEQLGLESHFARLRLLDPARYHDLERFREEESQYQPVNDLVKELL 365 Query: 361 AGNKLSN-----DELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQEL--------VSML 407 + + D L + +G+ ++ LL N + DA +E V L Sbjct: 366 GESGPTRLLDSQDLQAKLADYLGQDAVDKLLAELNQFAVDADEDSREEALHRVERAVRKL 425 Query: 408 MDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDM 467 +D+HG RVLFRNTR+ +KGFP+R LH LP P + T + + Sbjct: 426 LDQHGVGRVLFRNTRSAIKGFPQRILHLHPLPQPEELATLSASASL-----------EQR 474 Query: 468 LYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLRERE 527 L+PER+ A W D RVEWL +L +R +KVLVICA A TAL LE LR R Sbjct: 475 LHPERLLG------AEWVKTDSRVEWLAQWLKQNRQEKVLVICAHAETALDLEDFLRLRG 528 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNP 587 G R AVFHEG+S++ERDRA A+FA+++ GAQ L+CSEIGSEGRNFQFA H+V+FDLP NP Sbjct: 529 GYRTAVFHEGLSLLERDRAGAYFADDEYGAQALICSEIGSEGRNFQFARHLVLFDLPQNP 588 Query: 588 DLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVY 647 DLLEQRIGRLDRIGQ HD+ IHVP+ E +AQ L+RW++EG++AF CP G IY Sbjct: 589 DLLEQRIGRLDRIGQRHDVNIHVPFFENSAQERLLRWHNEGINAFSRPCPAGAAIYQRFA 648 Query: 648 NDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIE 707 L + L D + F+ LI + + E L+QGRD LLE++S KA L E I Sbjct: 649 VRLESELEQTDDRDEFNQLIADTHQFTEETLQALQQGRDPLLELNSCDPLKANDLVEQIV 708 Query: 708 EQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREV 767 E + L + +F G++Q+ + + P DHM FPGL EDG+T TF R++ Sbjct: 709 EDERRKELEDYIERVFSQYGVDQEQHSERAYIFRPGDHMQCSHFPGLPEDGVTATFHRDL 768 Query: 768 ALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAP 827 AL+R+D QF+TWEHP++ LD+IL G+ G++ + +K L G L+VE I+ + AP Sbjct: 769 ALSRDDMQFLTWEHPIVTGALDMILCGEFGNTGLCTIKLPPLQPGALMVETIFRLNCPAP 828 Query: 828 KQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAI 887 K LQL RFLP PVR+L+D +G L + + V + T LV + + + Sbjct: 829 KALQLYRFLPKEPVRLLIDSSGKELGQILTAAHLQQLGENVPKRTAQDLVRHARAQIEPL 888 Query: 888 LQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVM 947 + E L++ + E E+ RL+AL VNPNIR DE+ + + + Sbjct: 889 ITKAEKTAAAQKSELVERSIATMLESQQTEIERLKALAEVNPNIRQDEIDFLIQQTETLE 948 Query: 948 ESLDQAGWRLDALRLIVVT 966 + L A LDA+R+++ T Sbjct: 949 KYLKGAQLTLDAVRVVIAT 967 >UniRef50_B7V6T4 RNA polymerase-associated protein rapA n=24 Tax=Gammaproteobacteria RepID=RAPA_PSEA8 Length = 950 Score = 996 bits (2574), Expect = 0.0, Method: Composition-based stats. Identities = 503/967 (52%), Positives = 653/967 (67%), Gaps = 25/967 (2%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 + GQRWISD+E+ELGLGT++A D R +T+L+P+TG+ R YA ++P+TRV F PGD + Sbjct: 5 QYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFAPGDEV 64 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 T +GW+M V EV+E GLL Y G + L E L + + F DRLFAGQID Sbjct: 65 THFEGWKMTVREVEESEGLLVYHGLTA--QNEQCTLPETQLSNFIQFRLASDRLFAGQID 122 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 + F+LRY + S+ + GL G R I HQL+IA +V R APRVLLADEVGL Sbjct: 123 PLPWFSLRYHTLERRSQLLQSSLWGLGGARAQPIAHQLHIAREVADRMAPRVLLADEVGL 182 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEAG+I+H+QLLSG A RVLI+VPE LQHQWLVEM RRFNL+ ALFD ER+AE+ D Sbjct: 183 GKTIEAGLIIHRQLLSGRAGRVLILVPENLQHQWLVEMRRRFNLQVALFDKERFAES--D 240 Query: 242 AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 A NPF+ QL + +L++ + ++ + L A WDLLVVDEAHHLVW +D S EY +EQ Sbjct: 241 ASNPFEDTQLALVALEWLKEDERAQDALFAAGWDLLVVDEAHHLVWHQDQVSAEYALVEQ 300 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLA 361 LAE +PGVLLLTATPEQLG +SHFARLRLLDPNRFHD F E + YRPVA+AV LL Sbjct: 301 LAEIIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLEAFRRESEQYRPVAEAVQELLD 360 Query: 362 GNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT 421 LS + +G + E L D E AR LV L+DRHGT RVLFRNT Sbjct: 361 HGSLSAGARKAIHGFLGSEGDELLASVEGGDEE----ARSRLVRELLDRHGTGRVLFRNT 416 Query: 422 RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ---EFE 478 R V+GFP+RELH LP+P+QY+ + A + + LYPE +Q E Sbjct: 417 RAAVQGFPQRELHAYPLPMPSQYEE-------LPAGEHPD------LYPEVNFQQQWEDG 463 Query: 479 GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 DN WW FDPRVEWL+ L + KVLVICA A TAL LE LR R GI A VFHEGM Sbjct: 464 DDNNRWWRFDPRVEWLIDTLKMLKQFKVLVICAHAETALDLEDALRLRSGISATVFHEGM 523 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 SI+ERDRAAA+FA+E+ GAQVL+CSEIGSEGRNFQFA H+V+FDLP +PDLLEQRIGRLD Sbjct: 524 SILERDRAAAYFADEEFGAQVLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLD 583 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ H IQ+HVP+LE +AQ L +WYH+ L+AF +TCPTG + L+ L + Sbjct: 584 RIGQRHTIQLHVPHLENSAQQRLFQWYHQALNAFLNTCPTGNALQHEFGPRLLPLLDGGE 643 Query: 659 QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF 718 +D L+ R + EAL+A+L GRDRLLE++S G + +AL E+IEEQDDD L + Sbjct: 644 DK-AWDALLAEGRARREALEAELHSGRDRLLELNSGGAGEGEALVEAIEEQDDDFALPIY 702 Query: 719 AMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFIT 778 LFD GI+ +D +N ++L PS+ ML FP ++G+TIT+DR ALARED QF+T Sbjct: 703 MERLFDAYGIHSEDHSENALILKPSEKMLDAGFPLGDDEGVTITYDRAQALAREDMQFLT 762 Query: 779 WEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPP 838 WEHP+++ G+DL+LSG G+++++L+KNKAL GT+L+EL++V EA AP+ LQL R+LPP Sbjct: 763 WEHPMVQGGMDLVLSGSMGNTSVALIKNKALKPGTVLLELLFVSEAVAPRALQLGRWLPP 822 Query: 839 TPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKS 898 +R LLD NGN+LA +V ET N QL +V R + +K V A + + + E +I Sbjct: 823 QALRCLLDANGNDLAGRVSLETLNDQLESVPRVSANKFVQAQRDVLAKQFDVAEGKIVPR 882 Query: 899 ARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLD 958 + A+ + + EL+RL AL+AVNP++RD EL ++ + R++ + LD+A RL+ Sbjct: 883 HEERVARAKQQFAAAMDEELARLTALKAVNPSVRDSELDSLRTQREEGLALLDKASLRLE 942 Query: 959 ALRLIVV 965 A+R++V Sbjct: 943 AIRILVA 949 >UniRef50_B4RZE3 RNA polymerase-associated protein HepA n=3 Tax=Alteromonadales RepID=B4RZE3_ALTMD Length = 947 Score = 992 bits (2564), Expect = 0.0, Method: Composition-based stats. Identities = 451/971 (46%), Positives = 621/971 (63%), Gaps = 36/971 (3%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 F++GQRW+S+TE+ELGLG ++ D R+V +L+P+TGE R Y + D+P+TR++F G+T+ Sbjct: 6 QFSVGQRWLSNTETELGLGVIMGTDFRSVEVLYPATGEARKYTKQDAPLTRLIFEIGETV 65 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 S DGW+M + E +E G+ Y G R DT+ V L E LDS + ++P+ RLF+ Q+D Sbjct: 66 KSQDGWEMTITEKEESQGVCIYHGLREDTKAQ-VRLPETMLDSHIQLNQPERRLFSQQLD 124 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 F LR RA Y + R GL G R SLIPHQL+IA +VG RHAPRVLLADEVGL Sbjct: 125 NPKWFDLRERALDYQYDYLRSSTIGLAGARISLIPHQLHIASEVGGRHAPRVLLADEVGL 184 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEA +I+HQQL +G AERVLI+VP++L HQWLVEMLRR NL FA++D+ R + Sbjct: 185 GKTIEAALIIHQQLKTGRAERVLILVPDSLVHQWLVEMLRRVNLPFAIYDESRCDAIEES 244 Query: 242 A------YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 NPF+ +QLV+CS+DF +S++R + + A WDL+VVDEAHHL WS +A S E Sbjct: 245 EASDAGEVNPFENDQLVLCSIDFLSQSEKRQKQVQAASWDLMVVDEAHHLAWSSEAQSAE 304 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 Y+ +E LA PGVLLLTATP+QLG ESHFARLRLLDP RFH + F+EE+ Y +ADA Sbjct: 305 YKCVEALANLTPGVLLLTATPDQLGHESHFARLRLLDPARFHSYNAFLEEESKYSQLADA 364 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR 415 VA LL+ + ++ + L E P + D + R L+ L+D HGT R Sbjct: 365 VAPLLSDAEPNDKQRTKLAEF------APDVMEHTGDLSTPE-NRHALLHQLIDCHGTGR 417 Query: 416 VLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ 475 +LFRN R ++GFP+R+L +L LP Y A+ + + LYPER+ Sbjct: 418 MLFRNRRANIEGFPERKLSAYELALPEVYADAVSGGDLTYS-----------LYPERMAN 466 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFH 535 W DPRVEWL+ ++ S + +K+L+ICA A TA +L +V+R + GIR +VFH Sbjct: 467 VVNS----WTKHDPRVEWLLDFMQSVKPEKILLICASARTAQELGEVIRTQSGIRHSVFH 522 Query: 536 EGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIG 595 EGMSI+ERD+AA +FA+E+ GAQ+LLCSEIGSEGRNFQFA H+V+FDLP PDLLEQRIG Sbjct: 523 EGMSIVERDKAAHYFADEEEGAQILLCSEIGSEGRNFQFAHHLVLFDLPITPDLLEQRIG 582 Query: 596 RLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLA 655 RLDRIGQ +QIHVPYL KTAQ VL+ WYHEGL+AFE TCPTG ++D V L+ Sbjct: 583 RLDRIGQTQTVQIHVPYLAKTAQHVLLDWYHEGLNAFEKTCPTGSGVFDDVKPLLVGACL 642 Query: 656 SPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 PD D+LI + L AQLE GRDRLLE++++G + + L E I D + +L Sbjct: 643 HPDDISARDELINMSVTLNSQLVAQLEAGRDRLLELNASGEGRVEQLLEDIVTLDSEQDL 702 Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQ 775 F +FD IG+ Q+++G++ +L P++ M V PGL +G+T+T+ R VA E+ Q Sbjct: 703 SRFMGRVFDAIGVQQEEKGNDCFILMPTESM-VSQLPGLDPEGMTVTYKRRVATTLENVQ 761 Query: 776 FITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRF 835 F++W+HPL+ +D+IL+ G S++ + +LP G +E ++V+ AQAPK LQL RF Sbjct: 762 FLSWDHPLVHTAIDVILTDVHGKSSMGFIAEPSLPKGAYWIEALFVLHAQAPKALQLGRF 821 Query: 836 LPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQI 895 LP TPVR+ LD GN A+ + F+ + R ++L+ A+QQ + ++ Sbjct: 822 LPQTPVRVCLDAQGN--ASDLSFDVKR----KIGRKISAQLLKALQQPLELAIEKARKLA 875 Query: 896 EKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGW 955 + A A N L E+ RL L+ NP +RD E+ IE+ + + + +A Sbjct: 876 HQQANQKQHDALNTMHLTLGEEIQRLRDLQKRNPAVRDSEIEFIETQMNALDKVIQEADV 935 Query: 956 RLDALRLIVVT 966 +LDALR++V Sbjct: 936 QLDALRIVVNN 946 >UniRef50_C6MG44 SNF2-related protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MG44_9PROT Length = 966 Score = 987 bits (2553), Expect = 0.0, Method: Composition-based stats. Identities = 446/971 (45%), Positives = 622/971 (64%), Gaps = 15/971 (1%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRWI D + +LGLGTV V+ R VTL+F +TGE R YAR +P+TRV+F GDT+ Sbjct: 4 FKPGQRWICDVDLQLGLGTVQTVEHRIVTLIFKATGEIRSYARQSAPLTRVVFKSGDTVG 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 S+D ++V EV E NGL+ Y + ++ S + L E L L+ ++P +RLF GQ D+ Sbjct: 64 SYDNAVLKVTEVHERNGLVVY--SCVNESGSSIELAEAQLAHHLLLNRPAERLFTGQFDQ 121 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 F +RY+ + + P GL G RTSLIPHQL IAH+VGRR+APRVLLADEVGLG Sbjct: 122 DKWFRIRYQTLLIRNRLAQAPLYGLVGTRTSLIPHQLYIAHEVGRRYAPRVLLADEVGLG 181 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA--EAQH 240 KTIEAG+ILHQQLL+ A+RVLI+VPETL HQWLVEMLRRFNL+F++FD+ R E Sbjct: 182 KTIEAGLILHQQLLTERAKRVLIVVPETLIHQWLVEMLRRFNLQFSIFDEARCLALEESE 241 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 + NPF +EQL++CSL+F R+ +R + + WDLLVVDEAHHL WS+ A S Y IE Sbjct: 242 EGENPFHSEQLILCSLNFLRQYPKRFQTALQGNWDLLVVDEAHHLHWSQQAVSPGYAMIE 301 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 QLA GVLLLTATPEQLG SH+ARLRLLDP+RF+ F+ F+ E+++Y P+A AV LL Sbjct: 302 QLAACTKGVLLLTATPEQLGKASHYARLRLLDPHRFNSFSAFIAEEQSYEPIAQAVEALL 361 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLL---QAANSDSEDAQSARQELVSMLMDRHGTSRVL 417 G L+ + ++ + + + LL Q +D R +L +L+DRHGT R+L Sbjct: 362 EGQALNAEIRQLIADTLNAAQAQVLLACLQDPAADQSQILKTRNKLAELLLDRHGTGRIL 421 Query: 418 FRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ-E 476 FRNTR +KGFP+R+L + L LP +YQ + + +A + R +L PE +YQ Sbjct: 422 FRNTRAAIKGFPERKLVAVPLALPVEYQQCL-----ITFETTALSQPRLLLCPELLYQAR 476 Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 E + W DPR+ WL L + +KVLVI A T + Q L+ + G VFHE Sbjct: 477 AEPEQPYWTEIDPRISWLSTTLRQLKPEKVLVIAANTQTTRDIAQALKMQTGQHIPVFHE 536 Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 MS+IERDRAAA+FA+++TG+Q+L+CSEIGSEGRNFQF+ H+V+FDLP NPDLLEQRIGR Sbjct: 537 SMSLIERDRAAAFFADKETGSQILICSEIGSEGRNFQFSHHLVLFDLPLNPDLLEQRIGR 596 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS 656 LDRIGQ IQIHVPYLE +A +V+ WYHEGL+AFE TCP G+T++ V LI L Sbjct: 597 LDRIGQTETIQIHVPYLENSALAVMFHWYHEGLNAFEKTCPAGQTVFVKVEEQLIAALHQ 656 Query: 657 PD-QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 Q + L+ + H L L+ GRD+LLE +S A+ L ++ QD+D L Sbjct: 657 RQTQDKALAGLVGVTQTTHRELNEALDCGRDKLLEYNSFRPGVAEQLMQAARTQDNDPAL 716 Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQ 775 + + +FD G++ ++ + PS+HM +P FPGL ++G IT+ R+VALA ED Sbjct: 717 LQYMETVFDCCGVHIEEHRAGSYLTEPSEHMSMP-FPGLQDEGSVITYMRDVALANEDMH 775 Query: 776 FITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRF 835 F+TWEHP++ + ++ ILS ++G++ + LK++ + GTLL+E ++V+EA Q NR+ Sbjct: 776 FLTWEHPMVTHAIERILSNESGNAVVVALKHQQVQPGTLLLETLFVLEASGQHVQQSNRY 835 Query: 836 LPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQI 895 LPP +R++LD+ G+ ++ + N+ + V +++ + + +L++ E Sbjct: 836 LPPAVIRIVLDEQGSGDYPHLDHDAINQHVQPVAPGIAKQVMQLKEGAIRELLRVSEQHA 895 Query: 896 EKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGW 955 A LI AA + E+ RL+AL+ VNPN+RD+E+ E QQ+ +L + Sbjct: 896 GAQAPQLIAAAEARIRQTFIPEIERLKALQQVNPNVRDEEVQFFEQQLQQLTGALKSSNL 955 Query: 956 RLDALRLIVVT 966 LDA+R+IV T Sbjct: 956 GLDAVRVIVAT 966 >UniRef50_Q5ZT66 ATP-dependent RNA helicase n=9 Tax=Gammaproteobacteria RepID=Q5ZT66_LEGPH Length = 958 Score = 981 bits (2537), Expect = 0.0, Method: Composition-based stats. Identities = 419/987 (42%), Positives = 618/987 (62%), Gaps = 51/987 (5%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F +GQRWIS+TES+LGLG + VD R V++ FP+ GE+R+YA ++P++R+++ G+ Sbjct: 1 MTFRIGQRWISNTESQLGLGIITEVDGRQVSISFPAAGEDRIYAIDNAPLSRIVYKTGEE 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I ++D +++V ++E++G+L Y G D + + E+ L+ + + PQ RLF+G + Sbjct: 61 ILTNDQQRIKVTSIQEQDGVLLYTGN--DDLGNVAQVSELALNCFIKLNSPQQRLFSGLL 118 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D+++ F LR + ++ + GL G RT+ + HQ+ IA++V +R APRV+LADEVG Sbjct: 119 DKLNAFKLRIKTLEHLGRLQQSKARGLLGSRTNHLIHQIYIAYEVAQRFAPRVMLADEVG 178 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF---------- 230 LGKTIEAGMILH QL +G A RVLIIVP +L HQW VEMLRRFNL F++ Sbjct: 179 LGKTIEAGMILHYQLHTGRASRVLIIVPNSLIHQWFVEMLRRFNLHFSIIGPNQYDAMPS 238 Query: 231 ------DDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHH 284 D++ E + N F+ EQLV+ SLDF ++ + A+WDLLVVDEAHH Sbjct: 239 TLDELEDNDNPIEPASEDGNLFEGEQLVLTSLDFLMENETARQQALAAQWDLLVVDEAHH 298 Query: 285 LVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVE 344 L WSED+ S EY IE+L+ G+LLLTATPEQ+GM+SHFARLRLLDP RF+DF+ FV Sbjct: 299 LYWSEDSQSPEYTFIEKLSARSTGLLLLTATPEQVGMKSHFARLRLLDPARFYDFSAFVN 358 Query: 345 EQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS--EDAQSARQE 402 E+K Y + V L+ E G ++ P L + ++A + Sbjct: 359 EEKQYHEINKIVQDLMDYK-----------EKNGVDELNPQLHSHLKQLLGKEAPAGINA 407 Query: 403 LVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAED 462 + L+DR GT RVLFRNTR +KGFP+R +H + L P Y I+ S ++ Sbjct: 408 TIKELLDRFGTGRVLFRNTRAAIKGFPERRIHPVALTCPALYSEIIRESNLI-------- 459 Query: 463 RARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQV 522 LYPE + N +W DPRV+WL+ + R +K+LVICAKA TA+ LEQ Sbjct: 460 ----HLYPETLLN-----NDSWIEHDPRVQWLVNKINELRPEKILVICAKAKTAISLEQY 510 Query: 523 LREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFD 582 L+ R GIR+ +FHEG++IIERDRAAA+FAE++ GAQVL+CSEIGSEGRNFQF+ H+V+FD Sbjct: 511 LKLRTGIRSTLFHEGLTIIERDRAAAYFAEQENGAQVLVCSEIGSEGRNFQFSHHLVLFD 570 Query: 583 LPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI 642 LP NPDLLEQRIGRLDRIGQ H I+IHVPYL TAQ L RWYHEG++ + +C G +I Sbjct: 571 LPLNPDLLEQRIGRLDRIGQNHPIEIHVPYLAGTAQEKLFRWYHEGINILQQSCSVGFSI 630 Query: 643 YDSVYNDLINYLASPDQ---TEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKA 699 ++ N L L+SP Q + + LI + + + +K L GRDRLLE++S Sbjct: 631 FEVFENRLTPVLSSPLQDISEQSLEKLIADTQLHTQHIKEALNAGRDRLLELNSCNYTIG 690 Query: 700 QALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGI 759 + L E+IE +++ L + ++ GI+Q+ +N +L P +HM FPGL EDG+ Sbjct: 691 KELIEAIEAEENCLELENYMSQVYQEYGIDQEYHSENAEILRPGNHMKTAHFPGLKEDGM 750 Query: 760 TITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELI 819 T+T+ R AL RED +F++WEHP++ + +++IL + G++T++ + K++ GTL +E Sbjct: 751 TVTYSRSKALVREDMEFLSWEHPMVYDTMEMILESELGNATVTTISIKSIKPGTLFLETF 810 Query: 820 YVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNA 879 Y + + APK LQL+RF+P P+R+L+D G NL+ + +E N + RH G ++ Sbjct: 811 YTINSSAPKYLQLDRFIPSLPIRILMDTTGKNLSGILSYEQLNNLCQPLKRHLGYPVIKQ 870 Query: 880 VQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAI 939 V++++ +ILQ E + I+ A++ + S E++RLE+L+ +NP IRD+E+ Sbjct: 871 VREEIESILQQTNKIAEDQMKLFIEEAKSTMELTTSQEVNRLESLQKINPAIRDEEIEFF 930 Query: 940 ESNRQQVMESLDQAGWRLDALRLIVVT 966 + + ++ + +L A+R+++ Sbjct: 931 KKKISESNYFINSSTLKLQAIRVVINV 957 >UniRef50_B7RWY5 Type III restriction enzyme, res subunit family n=3 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RWY5_9GAMM Length = 920 Score = 963 bits (2490), Expect = 0.0, Method: Composition-based stats. Identities = 437/966 (45%), Positives = 602/966 (62%), Gaps = 46/966 (4%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M + +GQRW+S +++LGLG VV V+ R +TL FP+ GE R YA ++P+TR+ F GD Sbjct: 1 MEYLVGQRWVSHADAQLGLGIVVDVEPRRITLSFPAVGEERTYASENAPLTRLRFKEGDH 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I++ +G ++ V + E +GLL Y G D + + + E+ LD+ + + PQ RL G Sbjct: 61 ISTVEGVELTVSAINEHHGLLMYTG--TDHHDQQLVVSELELDAFVQLTTPQQRLLNGHF 118 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D+ FALR ++++ GL G RTSL+ HQL IA++VG+RHAPRVLLADEVG Sbjct: 119 DKNQDFALRVATLQHTNRLQGSAARGLMGSRTSLLHHQLYIANEVGQRHAPRVLLADEVG 178 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMI+HQQLL+G A R LI+VP +L HQWLVEMLRRFNL F+LFD +R AE Sbjct: 179 LGKTIEAGMIIHQQLLTGRATRALILVPPSLLHQWLVEMLRRFNLHFSLFDADRLAEMSE 238 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 NPF+ EQLV+CSLD + + A WDL+VVDEAHHL WSED +Y +E Sbjct: 239 G--NPFEAEQLVLCSLDMFEGRDELQQMALAAGWDLVVVDEAHHLHWSEDEAGEDYGFVE 296 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 L+ G+LLLTATPEQ+G SHFARLRLLDP+RFHD F EE+ +R +++ L Sbjct: 297 ALSTCSAGLLLLTATPEQIGQASHFARLRLLDPSRFHDLESFREEETQFRALSEMTDALD 356 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN 420 G SN ++ DA +L+ L+DRHGT RVLFRN Sbjct: 357 RGEMPSNLPEDL----------------------DASQPPAQLIEQLLDRHGTGRVLFRN 394 Query: 421 TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD 480 TR V+GFP+R LH LP P QY+ A+ + ER++ E Sbjct: 395 TRAAVEGFPQRHLHRYPLPQPEQYEHAV------------------VELEERLHPELPYF 436 Query: 481 NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI 540 + +W +FDPRV+WL L + R +KVL+ICA A+TA+ LE L R GIR+A F+E +SI Sbjct: 437 DDSWLDFDPRVDWLETTLKALRPEKVLIICAHASTAVALEHHLHMRAGIRSAAFYEALSI 496 Query: 541 IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI 600 IERDRAAA+FA+E GAQ L+CSEIGSEGRNFQFA H+++FDLP NPDLLEQRIGRLDRI Sbjct: 497 IERDRAAAYFADETGGAQTLVCSEIGSEGRNFQFAHHLILFDLPLNPDLLEQRIGRLDRI 556 Query: 601 GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT 660 GQ HD++IHVPYL+ +AQ L+ WY GLD F +C G I+ + L+ L +T Sbjct: 557 GQDHDVEIHVPYLQGSAQETLLDWYDRGLDLFRDSCSAGYMIFQNFQQRLLPQLEQ--RT 614 Query: 661 EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 FD+L+ + E + +L +GRDRLLE +S E A+ L E IE + L + Sbjct: 615 AAFDELLTDSAEFTLRTRDELREGRDRLLERNSCKREVAETLIEEIESLESGDTLENYLE 674 Query: 721 NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE 780 L + G++Q+ ++ ++L PS+HML FP + E+G T+TF RE L+RED +F+TWE Sbjct: 675 ALCEAFGVDQEFHSEHTLILRPSEHMLTGHFPYVGEEGTTVTFSREKGLSREDMEFVTWE 734 Query: 781 HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP 840 HP+I+ ++++ S + G++ I LK K +P GT+L+E ++ + APK LQ+ RFLP +P Sbjct: 735 HPMIQEAMEMVYSTELGNAAIGTLKLKGVPAGTMLLEAVFTINCVAPKALQVERFLPLSP 794 Query: 841 VRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR 900 +R+L+D G LA V E N + V + T ++ V ++V A + L AQ E + Sbjct: 795 IRLLVDARGKQLAELVPHERLNALVEKVKKATALAIIKQVHKEVDAKMSLANAQAEAKLK 854 Query: 901 ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL 960 A++ A + L AEL+RLEALR +NP IR++EL + ++ + A +L AL Sbjct: 855 AVLTEAEDRMRNDLGAELARLEALRQLNPAIREEELEHLRYRIEECAIHIQHASLQLQAL 914 Query: 961 RLIVVT 966 RL++ T Sbjct: 915 RLVITT 920 >UniRef50_C0N229 Type III restriction enzyme, res subunit family n=2 Tax=Gammaproteobacteria RepID=C0N229_9GAMM Length = 948 Score = 945 bits (2442), Expect = 0.0, Method: Composition-based stats. Identities = 409/965 (42%), Positives = 585/965 (60%), Gaps = 26/965 (2%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F +GQRW+S++E+ELGLG + + R + + FP+T E R YA +++P++RV+++ G+ + Sbjct: 6 FVVGQRWVSNSEAELGLGIIKQLSGRQIEVFFPATEETRFYAANNAPLSRVIYSVGEQVK 65 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 + + + V+E NG Y G D + +++ E+ LDS++ F+KPQDRLFAGQ+D+ Sbjct: 66 TREQQSFTISTVQEFNGNYIYQGDSSDGD--AISIHEMDLDSRVHFNKPQDRLFAGQVDK 123 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 +F LR + + GL G R +PHQL IA +V +R APRVLLADEVGLG Sbjct: 124 NSKFELRAKTLAHQHSLLSSSVYGLLGGRVQFLPHQLYIARNVTQRFAPRVLLADEVGLG 183 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY-AEAQHD 241 KTIEAG+ILH+Q+L+G R LI+VP+ L HQWLVEMLRRFNLRF L D +R+ A + D Sbjct: 184 KTIEAGLILHRQVLTGQVRRALIVVPDALLHQWLVEMLRRFNLRFTLIDKDRHEALTEQD 243 Query: 242 AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 NPFD+ QLV+C L + A+WD+++VDEAHHL W E S EY IE Sbjct: 244 EGNPFDSAQLVLCGLSELIAHPDMQADVTAADWDMMIVDEAHHLYWQEGNVSDEYALIET 303 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLA 361 LA +P +LLLTATPEQLG++SHFARLRLLDP+RFHD A F ++++ Y+PV++ + +L A Sbjct: 304 LAAQIPSLLLLTATPEQLGIDSHFARLRLLDPDRFHDLAAFKQQEEAYQPVSELIDLLDA 363 Query: 362 GNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT 421 L + + + E L A + A Q + L+DRHGT RVLFRNT Sbjct: 364 DTALEQVQKPATQKQLAEYLDA-DLLAQLLVEDTFLDASQIAIRQLLDRHGTGRVLFRNT 422 Query: 422 RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDN 481 R+ V GFP+R LH L LP QT+ + +L PE + + Sbjct: 423 RDVVAGFPERVLHPYPLTLPEALQTSDEP----------------VLLPENLLGDA---- 462 Query: 482 ATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSII 541 W D RV+WL+ +L +HR KVL+ICA+A TA+ LE +LR G+R+AVFHE MS++ Sbjct: 463 --WLQTDERVQWLVDFLKAHRQDKVLIICAQADTAMDLETLLRLHHGVRSAVFHEDMSLV 520 Query: 542 ERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 RDRAAA+FAEE+ GAQ L+CSEIGSEGRNFQF +V+FDLP NPDLLEQRIGRLDRIG Sbjct: 521 NRDRAAAFFAEEEEGAQCLVCSEIGSEGRNFQFCHQLVLFDLPNNPDLLEQRIGRLDRIG 580 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 Q H + IHVP+ EK+AQ VL WYH+G++AFE G+ + L L + + Sbjct: 581 QHHAVNIHVPFYEKSAQQVLFNWYHQGMNAFERVFAAGQVVSAQTDVLLQRCLQDSNDKK 640 Query: 662 GFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 +LI++ +E A ++ GR+RLLE +S + A + +E+ L + + Sbjct: 641 AQSELIESTQEIVATTLAAMQSGRNRLLERNSFDKQDAGLIVAELEDATRALELADYMDD 700 Query: 722 LFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEH 781 +FD G++Q + I++ P HML FP L EDG+T T+ R AL+RED F++WEH Sbjct: 701 VFDAFGVDQQTHSADSIIVEPGSHMLFEQFPALPEDGLTATYQRHRALSREDMAFLSWEH 760 Query: 782 PLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPV 841 P++ +DL++S D G+S L+ A GTLL+E ++VV + +QLQ NRF+ + + Sbjct: 761 PMVTGAMDLVISSDLGNSAFCTLETSAFNAGTLLLEALFVVNCVSGRQLQTNRFITDSHL 820 Query: 842 RMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARA 901 R+++D+ G V FN+ + R T +L+ + + +++ E + Sbjct: 821 RLVIDERGRQHQESVPDREFNKLAGRIPRATAQELIRHARGQISGLIEHAEKAVVAPQER 880 Query: 902 LIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALR 961 + A + +L AE RL+AL VNP IR E+ + R Q+ +S+ A RLDA+R Sbjct: 881 IRQQALDAMHAELEAEQQRLQALAEVNPTIRQQEIDFLAQRRAQLADSIQSAELRLDAVR 940 Query: 962 LIVVT 966 + +VT Sbjct: 941 VAIVT 945 >UniRef50_Q1R0C7 Helicase-like protein n=4 Tax=Gammaproteobacteria RepID=Q1R0C7_CHRSD Length = 980 Score = 923 bits (2386), Expect = 0.0, Method: Composition-based stats. Identities = 430/982 (43%), Positives = 593/982 (60%), Gaps = 27/982 (2%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRW+SD E+ELGLGT+++ D R+VT+LF ++ E R Y+ +P+TRV+F GD I Sbjct: 4 FIPGQRWVSDGEAELGLGTILSCDFRSVTVLFAASQETRTYSVRQAPLTRVVFGAGDRIE 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 + DG + V++ KE GLL Y+ D E E L + F + +DRL GQ+DR Sbjct: 64 AADGRTLTVDDTKEAKGLLIYVVETADGEYE--EFPESRLADSMRFQQARDRLLTGQVDR 121 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 D F LRYR + + P +GL G R LIPHQL IA +V RRHAPRVLLADEVGLG Sbjct: 122 NDWFELRYRTLHHYHRIAQHPANGLAGPRVDLIPHQLYIADEVSRRHAPRVLLADEVGLG 181 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTIEAG+ILH+ L++G AER LI+VP++L HQWLVEMLRRF+L F L D+++ +QH Sbjct: 182 KTIEAGLILHRLLITGRAERALILVPDSLTHQWLVEMLRRFSLHFTLLDEQQ---SQHST 238 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 NPF++ QLV+ S + + R +WDLL+VDEAHHL WS +A Y +EQL Sbjct: 239 GNPFESAQLVLASQQWLFANPHRQTQAQACDWDLLIVDEAHHLDWSPEASGPGYACVEQL 298 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML--L 360 A + GVLLLTATPEQ+G+ SHFARLRLLDP R+ A F E+ Y VA+AV L L Sbjct: 299 AHAIDGVLLLTATPEQMGLASHFARLRLLDPERYTSLAAFEAEETGYARVAEAVDALERL 358 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN 420 G+ D + + + Q + L SD SAR++L L+DRHGT RV+FRN Sbjct: 359 PGDAADRDSVGAVIDDADSQALLDTLIDPESDDTQRDSARRQLREQLLDRHGTGRVMFRN 418 Query: 421 TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGAR------KSAEDRARDMLYPERIY 474 +R V GFP+R LH +L P+ Y+ ++ + D +LYP+ +Y Sbjct: 419 SRRHVAGFPERHLHVTRLAPPSSYRRELRKLDRDMDYLDDLLITTGLDHPEVLLYPDAMY 478 Query: 475 Q--------EFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLRER 526 + + + WW DPRV WL+ LT K+LVI TA L + LR Sbjct: 479 RAQCDASPGDTALNAEPWWQIDPRVTWLLERLTEVGRDKMLVIAHDRETASDLSEALRVL 538 Query: 527 EGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFN 586 G++A VFHEG+++IERDRAAA FA+E+ G QVL+CSEIGSEGRNFQF H+VMFDLP + Sbjct: 539 GGVQAPVFHEGLTLIERDRAAAAFADEEDGCQVLVCSEIGSEGRNFQFCRHLVMFDLPAH 598 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSV 646 PD LEQRIGRLDRIGQ H I+IHVP E + L+RWY EG+ AF+ G +YD+ Sbjct: 599 PDQLEQRIGRLDRIGQQHAIEIHVPVFEDSPGERLLRWYDEGMRAFDAPHGIGSELYDAF 658 Query: 647 YNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESI 706 + + + L D ++I + R E+ A E GRDRLLE ++ +AQA+ E+I Sbjct: 659 GDSVADALLDDDALA---EVIADTRRFFESRLAAHEAGRDRLLEWNACRPARAQAITEAI 715 Query: 707 EEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGL--SEDGITITFD 764 E DDD L + D+ G+ D G ++ L HML PGL E+G + TFD Sbjct: 716 RELDDDPALPRYVDKALDVFGVESRDLGGDIQHLLAGPHML-DGLPGLVKGEEGFSATFD 774 Query: 765 REVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEA 824 R+ ALAR+D Q ++WEHPL+R ++ IL G G++ ++LL++ A+P G L+ EL++ Sbjct: 775 RQRALARDDVQRLSWEHPLVREMMERILDGTLGNTALALLQHPAIPGGRLMAELVFRTHC 834 Query: 825 QAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDV 884 AP+ L + RFLPPT VR+LLD++G NL +V F + L V + L+ + + Sbjct: 835 PAPRHLNVGRFLPPTAVRLLLDESGANLTQKVSFGGLAKNLQKVKKAVARDLIKSRHAQL 894 Query: 885 HAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQ 944 +L E + E ++I+AA+ + L EL+RL+AL NP +RD E+ A+ R+ Sbjct: 895 RDLLTRAEDEAENELPSIIEAAQTHMRDTLDTELARLKALARHNPAVRDAEIEALAHERR 954 Query: 945 QVMESLDQAGWRLDALRLIVVT 966 ++ ++D RLDA+R++V Sbjct: 955 ELDTAIDATRLRLDAVRVVVTV 976 >UniRef50_A4A3Z1 RNA polymerase associated protein rapA n=1 Tax=Congregibacter litoralis KT71 RepID=A4A3Z1_9GAMM Length = 916 Score = 921 bits (2380), Expect = 0.0, Method: Composition-based stats. Identities = 422/965 (43%), Positives = 575/965 (59%), Gaps = 53/965 (5%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M + +GQRW+S +SELGLG VV +D R V++ FP+ E R YA ++P+TRV GD Sbjct: 4 MSYAIGQRWLSHADSELGLGIVVELDGRRVSVHFPAVEEERTYATDNAPLTRVKLREGDA 63 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 + + DG ++QV V EE LL Y E L E+ LD + + P+ RL A Q Sbjct: 64 LHTRDGRKLQVLAVHEEQELLIYEVA---GEGQRELLAELDLDDHIDLATPRQRLLASQY 120 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D FALR ++ + GL G RT+L+PHQL +A++VG+RHAPRVLLADEVG Sbjct: 121 DGHAAFALRMATAEHLHRLQQSGLRGLLGTRTALLPHQLYVANEVGKRHAPRVLLADEVG 180 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMILH+QLLSG + RVLI+VP +LQ QWLVEM RRFNL+FALFDD+R E+ Sbjct: 181 LGKTIEAGMILHRQLLSGDSRRVLIMVPASLQFQWLVEMRRRFNLQFALFDDDRLMES-G 239 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 + NPF+ EQLV+CS D R L +AEWD+L+VDE H L W D+ S E++ +E Sbjct: 240 EGSNPFEDEQLVLCSTDLFLDPTARALAL-DAEWDMLIVDEVHRLAWHRDSVSDEFRFLE 298 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 +A +PG+LLLTATPEQ+G+E+HFARL LLDP RFHDFA F EE+ Y+ + L Sbjct: 299 SMAAQIPGLLLLTATPEQVGLEAHFARLALLDPERFHDFAAFEEEESQYKRWSSLTDALD 358 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN 420 G K ++ D ++A + V+ L+DR+GT RVLFRN Sbjct: 359 RGEKPQGLPADI----------------------DPEAAPERQVAALLDRYGTGRVLFRN 396 Query: 421 TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD 480 R V GFP RE+ LP A D + +Y + D Sbjct: 397 ARASVGGFPTREMQPHPLP------------------------AVDSPVYQHLYPDLHVD 432 Query: 481 NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI 540 W DPRV WL+ L + R +KVLVICAKA TAL LE L+ R GIR+A FHE +S+ Sbjct: 433 TEQWLQEDPRVAWLVSQLKALRPEKVLVICAKADTALALESYLQLRAGIRSAAFHEQLSL 492 Query: 541 IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI 600 +ERDRAAA+FAE++ GAQ L+CSEIG EGRNFQFA H+++FDLP +PD LEQRIGRLDRI Sbjct: 493 VERDRAAAYFAEQEQGAQALICSEIGGEGRNFQFAQHLILFDLPEHPDQLEQRIGRLDRI 552 Query: 601 GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT 660 GQ I IHVPY+E +AQ L+RWYHEG+D F +C G I L L +Q Sbjct: 553 GQKERIFIHVPYIEGSAQETLMRWYHEGIDLFRSSCSAGDMILGEFKESLEEQL--REQN 610 Query: 661 EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 F+ L+++ + E + +L +GRD+LLE S E+ QAL +I + +D L AF Sbjct: 611 GAFEALLRDTADFTERARKELSEGRDKLLERSSCNAEQGQALGTAISDIEDPDTLGAFLR 670 Query: 721 NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE 780 L D+ G+ +D GD+ VL + L+ FP + EDG T+T R+ ALARED F+ WE Sbjct: 671 ELCDVTGVEHEDLGDSSSVLRRGEQELLEIFPEVPEDGCTVTVSRDEALAREDWIFLGWE 730 Query: 781 HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP 840 HP + N + +L G +++ +K K +P G+ L EL++ V AP+ L L R+LP P Sbjct: 731 HPWMENAMTTVLGSALGQASVGAMKLKGVPGGSRLYELLFTVSLSAPRALGLQRYLPLAP 790 Query: 841 VRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR 900 R+LLD +G +L+ + E N ++ V R T SK+V +++++ + EAQ Sbjct: 791 QRILLDASGRDLSKLLTHERLNERVEKVPRGTVSKIVRQLREEIETRIDDAEAQFAGELE 850 Query: 901 ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL 960 A E++ E++RL ALRAVNP IR++E+ + ++ + +L A L + Sbjct: 851 TRQKEAAQRYGEQMDEEIARLSALRAVNPAIREEEIENLRLRKEAGLVALGTARSTLQGV 910 Query: 961 RLIVV 965 RL++ Sbjct: 911 RLVIT 915 >UniRef50_C5SAQ5 Helicase domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SAQ5_CHRVI Length = 928 Score = 901 bits (2328), Expect = 0.0, Method: Composition-based stats. Identities = 443/964 (45%), Positives = 578/964 (59%), Gaps = 41/964 (4%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRW+S+T++ELGLG V AVD R V + +P+TGE RLYARS++P+ R++ G+ I Sbjct: 4 FVPGQRWLSETQTELGLGLVEAVDGRHVRIAYPATGETRLYARSEAPLARLVVERGERIR 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 G +++V E + E+GL+ Y G D E L E LD +L F++P RL A ++D Sbjct: 64 DRAGRELRVIEARVEHGLIIYRG--EDAEGQLRELPEPELDDRLSFNRPGQRLLAARLDS 121 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 F LR+R + P GL G R +LIPHQL+IA +V RR APRVLLADEVGLG Sbjct: 122 DHWFRLRHRTWTQGMREAGSPTLGLVGARVALIPHQLHIAAEVSRREAPRVLLADEVGLG 181 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTIEAG+ILH+ L+G+A RVLI+ PE L HQWLVEM RRFNL ALFD ER+ + D Sbjct: 182 KTIEAGLILHRMRLTGSARRVLILTPEPLLHQWLVEMRRRFNLALALFDQERFESIRDD- 240 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 NPF +EQ V+C L+ + EAEWDLL+VDEAHHL WSE PS Y+ +E L Sbjct: 241 -NPFLSEQCVLCGLELLVAQAGAGRAVLEAEWDLLIVDEAHHLTWSETDPSPAYRLVEAL 299 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 A +P VLLLTATPEQLG HF RLRLLDP RFHD A F +E+ Y P+A A LL Sbjct: 300 ASRIPSVLLLTATPEQLGRAGHFGRLRLLDPARFHDPAAFQDEEARYAPIAALAARLLDD 359 Query: 363 NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR 422 L + + L ++GE D R+ L+ L+DRHGT RVLFRNTR Sbjct: 360 EPLDDADRARLESLLGECD---------------GLDRETLIERLIDRHGTGRVLFRNTR 404 Query: 423 NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNA 482 + GFP+REL LP P Y+T + + L PE + Sbjct: 405 ATIPGFPRRELIAHPLPEPDAYRTVPDLDPLAR------------LTPEC------AHGS 446 Query: 483 TWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 W + DPR++WL+ L R KVL+ICA+A T L+L + LR+R GI AAVFHEGM I+E Sbjct: 447 GWESVDPRLDWLIATLRDLRPAKVLLICAQAHTVLELREALRQRAGIHAAVFHEGMEIVE 506 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 RDRAAA+FA + G Q+LLCSEIGSEGRNFQFA H+++FDLP PDLLEQRIGRLDRIGQ Sbjct: 507 RDRAAAYFASVEDGTQILLCSEIGSEGRNFQFAHHLILFDLPLEPDLLEQRIGRLDRIGQ 566 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG 662 A I++HVPYL +L RWY EGL AFE CP +++ + L + LA P Q E Sbjct: 567 AQTIRLHVPYLSGGPMEILFRWYAEGLGAFEQLCPAAAAVHERLGGRLRDALADPAQAEA 626 Query: 663 FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNL 722 LI R L +L GRDRLLE+HS+ + AL ESI D + ++ + + Sbjct: 627 ---LIAETRMLASQLNGELAAGRDRLLELHSHRLTRDAALVESIAASDAERSVADYLSDF 683 Query: 723 FDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHP 782 +D G+ + +V+ P ML FP L EDG+T TFDR ALA ED F+TWEHP Sbjct: 684 WDAFGVEHEPGPGGSVVVRPGPQMLQETFPRLPEDGLTATFDRAQALANEDRAFLTWEHP 743 Query: 783 LIRNGLDLILSGDTGSSTISLLKNKA-LPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPV 841 + R ++L+ + + GS+ + L++ A P TLL+E++YV E AP +LQ+ FLPPT V Sbjct: 744 MTREAMELLTASELGSAALILIQGDARFPRATLLLEILYVAECPAPPELQVEHFLPPTLV 803 Query: 842 RMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARA 901 R+LLD G + A ++ E+ + N L+ + + L+ GE + + Sbjct: 804 RLLLDAEGRDRAGEIAHESLRGDCLSHNGTLARALIASQASRLAERLEQGEELAHGALKD 863 Query: 902 LIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALR 961 L AR + L EL RL AL AVNP +R DE+ + R+++ L QA RLDALR Sbjct: 864 LEQEARARMHQVLGDELERLLALAAVNPAVRPDEIARLRHRRERLDVLLGQAHLRLDALR 923 Query: 962 LIVV 965 LI+ Sbjct: 924 LIIA 927 >UniRef50_B5JYH0 RNA polymerase-associated protein HepA n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JYH0_9GAMM Length = 915 Score = 897 bits (2318), Expect = 0.0, Method: Composition-based stats. Identities = 398/971 (40%), Positives = 572/971 (58%), Gaps = 66/971 (6%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F+ GQRWIS+ E +LGLG V+ D R+V + F S GE R YA S +P++RV+ G+ + Sbjct: 4 FSPGQRWISEAEPDLGLGLVIEADVRSVRIAFLSCGEERTYAVSSAPLSRVLLREGERVR 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 +GW V++V EE GL Y G R D VA+ E L + + P+DRLF Q+DR Sbjct: 64 HGEGWHFTVDQVAEEQGLAAYRGHRDDG--ETVAVPETQLAHDIQLNAPRDRLFTNQLDR 121 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 F LRY + + + GL+G R S +PHQL IA +V R +PRVLLADEVGLG Sbjct: 122 HSAFTLRYETLRQRARLEQSDVRGLQGARISPLPHQLYIASEVASRPSPRVLLADEVGLG 181 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTIEAG+ILH Q L+ +R LI+VP+ L QWL+E++RRFNL A FD+ER A+ Sbjct: 182 KTIEAGLILHHQWLTERCQRALIVVPQALVSQWLLELMRRFNLAAAHFDEERCRAAEMAT 241 Query: 243 Y-NPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 NPF +EQLV+CSL+F +R E A WDL V+DEAHHL W+ +A S EYQ +E+ Sbjct: 242 DDNPFVSEQLVVCSLEFLMAEPERAEQALAAHWDLAVIDEAHHLGWTPEAVSPEYQWVER 301 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLA 361 LA G+LLLTATPEQLG HFARLRLLDP RF+D QFV+E+ Y AD V L+ Sbjct: 302 LARQTAGLLLLTATPEQLGRAGHFARLRLLDPARFNDLEQFVQEESRYEAAADGVDWLMQ 361 Query: 362 GNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT 421 G LS ++ L + E + + ++ARQ+LV LMDRHGT RVLFRNT Sbjct: 362 GEPLSQEQRQTLQALYPE--------LPSDQALKDEAARQQLVRDLMDRHGTGRVLFRNT 413 Query: 422 RNGVKGF---PKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 R+ V F P+R LH ++ + ++ E Sbjct: 414 RSHVSDFTHFPRRHLHRY-------------------------------VHSDEVHCE-- 440 Query: 479 GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 +WL+ +L SHR +KVLVIC A A+ LEQ L+ +EGI A FHEGM Sbjct: 441 -------------DWLVEWLKSHR-EKVLVICHSAERAVALEQRLQLKEGILCAAFHEGM 486 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 ++ RDRAAAWF E D GAQ LLCSEIGSEGRNFQFA H+V+ DLP PD+LEQRIGRLD Sbjct: 487 GLLARDRAAAWFGE-DMGAQALLCSEIGSEGRNFQFAHHLVLMDLPDQPDVLEQRIGRLD 545 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQA D+ IHVP +E + ++VL+RWY EGLDAF CP + +S+ + + ++ + Sbjct: 546 RIGQAQDVDIHVPVIEGSREAVLMRWYDEGLDAFSAPCPAASAVRESMNDTIEQAMSHAE 605 Query: 659 QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDD---DTNL 715 D LI+ RE H LK +LE+GRDRLLE S ++AQ L + ++ Q+ + L Sbjct: 606 DGAVLDALIEQTREAHRVLKTKLEKGRDRLLERSSCDIDRAQPLLDCLKAQETPQAEEVL 665 Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQ 775 +++ + D G++ + ++ ++ P DH LS++G ++T+ R+ AL RED Sbjct: 666 LSYLEQVCDNFGVDFEMLDTDVALMRPGDHYR-GGLRDLSDEGRSVTWHRQQALEREDLL 724 Query: 776 FITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRF 835 F+TWEHPL+ + +D + + G++++ L+ LP G LLVE ++ + AP+ L+L R+ Sbjct: 725 FLTWEHPLVTDAMDDVAGSNMGAASVGTLEQSGLPEGQLLVECLFRIHHVAPRSLELGRY 784 Query: 836 LPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQI 895 LPP R+++D ++++ + F +N V R T +++++ + + +L E Sbjct: 785 LPPQLFRIVIDAQQRHISSALPFSKVAMHVNKVPRETAKQVIDSQRSLLEPMLDRAEQIA 844 Query: 896 EKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGW 955 E + I+ + ++L EL RL L+A N ++R DE+ + + E++++A Sbjct: 845 EGALAPAIEKGLQKITQELEPELQRLITLQAHNASVRSDEIDQLGVKVEAAKEAVNEATL 904 Query: 956 RLDALRLIVVT 966 +++ +R++V Sbjct: 905 KMEGVRVLVTV 915 >UniRef50_Q0VNA6 RNA polymerase-associated protein HepA n=2 Tax=Alcanivorax RepID=Q0VNA6_ALCBS Length = 969 Score = 885 bits (2287), Expect = 0.0, Method: Composition-based stats. Identities = 431/997 (43%), Positives = 591/997 (59%), Gaps = 68/997 (6%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRW+S++E+ELGLG + +D R VT+ +P+ E R YA++++P++RV F+ GDTI Sbjct: 4 FIPGQRWLSESETELGLGIIKELDYRLVTVEYPAVEEERTYAKNNAPLSRVTFDSGDTIR 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTE-ESGVALREVFLDSKLVFSKPQDRLFAGQID 121 + D ++ V +V E NGL Y+ D E + E L L + DRL + Q+ Sbjct: 64 TADEMELVVTDVNELNGLKIYMAHPKDGSPEDIQPVPETNLGHTLRLTAALDRLLSNQLS 123 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 F LR + Q + GLRG R LI HQL IA V R APRVLLADEVGL Sbjct: 124 SNRWFELRIDSLNAHCRQQQSAIKGLRGPRIDLIGHQLYIADQVANRFAPRVLLADEVGL 183 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEAG+ILHQQLL+G A+RVL++VP L HQW VEM+RRFNL F++FD ER Q + Sbjct: 184 GKTIEAGLILHQQLLTGRAKRVLVVVPSPLVHQWFVEMVRRFNLHFSIFDAERLNALQPE 243 Query: 242 AY---------------------------------NPFDTEQLVICSLDFARRSKQRLEH 268 NPF +EQL++CS DF S+ +E Sbjct: 244 TSIKDMLAQIIEEENSPNDGADEAASNLSAASGDDNPFLSEQLILCSTDFL--SECDIEQ 301 Query: 269 LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 L A+WDLLVVDEAHHL WS S +YQ +E +A+ G+LLLTATPEQLG+ESH+ARL Sbjct: 302 LAAADWDLLVVDEAHHLEWSAQQASDDYQRVETIAKQARGLLLLTATPEQLGLESHYARL 361 Query: 329 RLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQA 388 RLLDP R+ F EEQ +Y+ VA L +K ++ + DI+ Sbjct: 362 RLLDPERYPSLEAFKEEQAHYQDVAALAGRLHDESKWDEALKQEAVALLPDMDID----- 416 Query: 389 ANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAI 448 +S R+ + + L+DR G RV+FRNTR+ + GFP R +H I L LP +Y+ Sbjct: 417 --------ESNREAIQAELLDRSGPGRVMFRNTRHNIAGFPARHVHGIPLTLPDEYKY-- 466 Query: 449 KVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV 508 +++ L+PE ++ + W DPRV WL + HR KVLV Sbjct: 467 ----------DSDEEIDGHLHPETLFH-----DDRWCTLDPRVTWLENFFKQHRHDKVLV 511 Query: 509 ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSE 568 ICA TA L + G+ A+FHE M +IERDRAAA+FA++ GAQ L+CSEIGSE Sbjct: 512 ICASKNTATDLHAHCNYKLGMNVAMFHEDMDLIERDRAAAFFADDFDGAQALICSEIGSE 571 Query: 569 GRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEG 628 GRNFQFA H+V+ DLP NPDLLEQRIGRLDRIGQ DIQIHVPY E+ AQ VL RWYHEG Sbjct: 572 GRNFQFAHHLVLLDLPLNPDLLEQRIGRLDRIGQTDDIQIHVPYFEQHAQEVLFRWYHEG 631 Query: 629 LDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRL 688 ++AFEHT P G IY + L L + + L+ + R L LE GRDRL Sbjct: 632 MNAFEHTNPAGHDIYLRSRDALEPLLTGDPEYTAIEALVDDTRAITTELHTLLETGRDRL 691 Query: 689 LEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLV 748 LE+ S GE+A+ L + D+D+ L F +FD G+ Q+D D ++L P HM Sbjct: 692 LELSSFDGERAETLISDLIAADEDSPLP-FMQRIFDRYGVEQEDHSDTAVILKPGPHMR- 749 Query: 749 PDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKA 808 FP L E+G+T+T +R ALAR+D QF+TWEHP++ L+++L+ G + +SLLKN Sbjct: 750 DAFPSLPEEGVTMTDNRATALARDDMQFLTWEHPMVTGSLEMMLTEHRGKAAVSLLKNPK 809 Query: 809 LPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAV 868 + GTLL+E IY V+A APK LQ +RFLP T +R LLD NG N++ + + ++Q + + Sbjct: 810 IKAGTLLIEAIYTVDAVAPKHLQADRFLPTTVIRHLLDANGKNISQAISHDGLSQQCHKM 869 Query: 869 NRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVN 928 ++ K+V + + + +L+ + + A ++I AA+ + EK + EL+RL+AL+A N Sbjct: 870 DKPLSRKIVGSQKALLEKLLKADDISASQEAESIITAAQQKMREKQAHELARLKALQAKN 929 Query: 929 PNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVV 965 P +R E+ A+E Q + + LD+A +L+A+R+IV Sbjct: 930 PAVRHAEIDALEDQTQALEKCLDEARCQLEAVRIIVA 966 >UniRef50_Q5QVN2 Probable ATP-dependent RNA helicase HepA n=2 Tax=Idiomarina RepID=Q5QVN2_IDILO Length = 886 Score = 882 bits (2280), Expect = 0.0, Method: Composition-based stats. Identities = 382/965 (39%), Positives = 562/965 (58%), Gaps = 82/965 (8%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F +GQR++S+TE+ELGLG + + R +T++FP+TGE RLY+ ++P+ R Sbjct: 4 FRVGQRYLSETETELGLGMITQAEGRHLTVMFPATGEVRLYSAQEAPLARYQLQVQQQGK 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 DGW ++E+ E G++TY G R D +ES V + E L ++ + RL AGQ DR Sbjct: 64 HADGWSFTIQELTESQGIVTYHGLRDDNQES-VVVPETQLSHQVDSNPALTRLLAGQADR 122 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 +D + LR A ++ + +GL G RT L+PHQL IA V R+ PRVLLADEVGLG Sbjct: 123 LDMYQLRCEASEHLAHHQASEVAGLLGVRTHLLPHQLYIAKTVADRYHPRVLLADEVGLG 182 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTIEAGMI+ ++L +G ++RVLI+VPE+L HQWLVE+ RRF L F LFDDER +A+ D+ Sbjct: 183 KTIEAGMIIKRRLNTGRSQRVLIVVPESLMHQWLVELRRRFALNFTLFDDERCEQAEADS 242 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 NPF TEQ +I S F S+ E L +AE+DLLV+DEAHHL + E+ A++ L Sbjct: 243 ENPFLTEQHIIISSRFMHESR-WSESLLKAEFDLLVIDEAHHLQ----PEAPEFSAVKNL 297 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 E VPG+LLLTATPEQ G E HF RL+LLDP+RF DFA F +EQ Y+ +A+ + Sbjct: 298 CEAVPGLLLLTATPEQEGAEGHFQRLQLLDPDRFSDFASFQQEQTQYKELAEQAESVTDP 357 Query: 363 NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR 422 +L + L+D+HGT RV+FRN R Sbjct: 358 AELDD---------------------------------------LLDKHGTGRVMFRNRR 378 Query: 423 NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNA 482 + GFP+R H ++L D P+ ++ Sbjct: 379 ADIGGFPERHFHPVEL---------------------------DECEPD--------EDM 403 Query: 483 TWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 WW DPR++WL+ ++ +RS+K L+IC A L L + LR G++AA FHEGM++ E Sbjct: 404 PWWMEDPRIDWLLNHIKQNRSEKALLICKTAEQVLDLSEALRVLAGVQAATFHEGMTLTE 463 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 RDR+AA+FA E+ G+ +LLCSEIGSEGRNFQF +++FDLP NPDLLEQRIGRLDRIGQ Sbjct: 464 RDRSAAFFASEEDGSPILLCSEIGSEGRNFQFVHQLILFDLPSNPDLLEQRIGRLDRIGQ 523 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG 662 +I I++PY + +A+++L+ WY +G++AF GR +YD+ D+ +A +Q Sbjct: 524 QQNIDIYLPYCKGSAEAILLPWYEQGMNAFSQCNAIGRKLYDAFGTDIEQAVA--EQEPL 581 Query: 663 FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNL 722 D+L+K +E HE + +G+D+L +++ E A+ + E I D L F + Sbjct: 582 SDELLKQTKELHETWLERNREGQDKLQALNACRPETAEKIIEQIHSDSDTDTLADFMIAF 641 Query: 723 FDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHP 782 FD G+N + + + P +HM V PGL +DGITITFDR AL ED F++W+HP Sbjct: 642 FDRFGVNNEVLDEERWFIRPGEHMRVGSLPGLPDDGITITFDRVTALNFEDTDFLSWDHP 701 Query: 783 LIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR 842 +++ L+L+ + D GS+ ++ LKN A+P GT +EL + APK L F P +R Sbjct: 702 MVQAALELLTADDFGSTCVAELKNPAIPAGTWFLELDFASIVPAPKAAALQEFCPLQSLR 761 Query: 843 MLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARAL 902 +L + G L+A+V E ++Q + +++ T +++ ++ I+Q G+ Q + + Sbjct: 762 LLFNGQGQELSAKVSRELLDQQSSFIDKKTARQILRQLRDPAQKIIQSGQQQAREWQQKQ 821 Query: 903 IDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRL 962 +D + A + L E +RL LR NP++R E+ AI +Q+ +L+ L A+R+ Sbjct: 822 LDKVKQNALDALQHERTRLLELRKKNPSVRSSEIEAINWREEQITAALESPQLSLQAVRI 881 Query: 963 IVVTH 967 +V H Sbjct: 882 LVNNH 886 >UniRef50_UPI0000E0E48B ATP-dependent helicase HepA n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E48B Length = 944 Score = 878 bits (2270), Expect = 0.0, Method: Composition-based stats. Identities = 389/970 (40%), Positives = 558/970 (57%), Gaps = 33/970 (3%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M FT+GQRW+S + ELGLG V V R VT+ FP T E++ Y+ SP+ R++ GD Sbjct: 1 MNFTVGQRWLSSQQPELGLGIVADVQLRQVTIYFPVTQEDKHYSIDSSPLIRLLLEKGDI 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 D + V + + NGL+ Y+ ES V L E L ++P+DRLF Q+ Sbjct: 61 GLDVDKQEFCVLDTMDTNGLIQYLVEYTHNNES-VVLTETQLSHLTQINQPEDRLFTLQL 119 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D+ + F R A + P GL G R SLI HQ++IA+ VG R APRVLLADEVG Sbjct: 120 DKYNWFDARREAFDARFTHQQSPLLGLSGARVSLIEHQIHIANQVGNRFAPRVLLADEVG 179 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEA MI+ +Q LSG A R+LIIVPETL HQWLVEM RR N+ A+FD R Sbjct: 180 LGKTIEAAMIIQKQRLSGRATRILIIVPETLIHQWLVEMHRRVNVPCAVFDASRVEALLE 239 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 D NPFD EQ+V+ S+D + + WDL+VVDEAHHL WS + S EY +E Sbjct: 240 DGMNPFDAEQIVLISIDTLVTEPKINAWALASSWDLMVVDEAHHLHWSNETVSDEYALVE 299 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 L + PGVLLLTATP+QLG ESHFARLRLLDP RF DFA + EQ Y+ +A+ LL Sbjct: 300 GLTQITPGVLLLTATPDQLGHESHFARLRLLDPARFTDFATYEAEQAQYKVLAELTDALL 359 Query: 361 AGNKLSNDELNMLG-EMIGEQDIEPLLQAANSDSE---DAQSARQELVSMLMDRHGTSRV 416 + + E +++ + + +D + A ++ Q +++ L+DRHGT R+ Sbjct: 360 DEQSTMSLVAELAETEATISNELQTHVASIYTDIDVEYLATTSHQSMINHLIDRHGTGRM 419 Query: 417 LFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQE 476 FRNTR + G +R LH L LP ++QT E Sbjct: 420 FFRNTRQSIAGLNERILHAYPLALPEEWQTLDCPRSHT-----------------CFIHE 462 Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 +++W DPRV+WL+ YL + K L+IC T LQL + +++ G VFHE Sbjct: 463 LPALHSSWLYDDPRVDWLLEYL-EDTTNKTLLICRSQRTVLQLAEFIKKLTGQHLPVFHE 521 Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 MSIIERDRAA +F++ + A +LLCSEIGSEGRNFQFA H+++FDLP +PDLLEQRIGR Sbjct: 522 NMSIIERDRAAHYFSDPENSAPLLLCSEIGSEGRNFQFAQHLILFDLPAHPDLLEQRIGR 581 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS 656 LDRIGQ+ + IHVPY+E T Q+ L + YHEGL++F TC G ++ ++ + + + LA Sbjct: 582 LDRIGQSQTVNIHVPYVEHTGQATLFKLYHEGLNSFNQTCAIGAKVFATLDHKIQSALAE 641 Query: 657 PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLI 716 P + +D+I + +QGRD+LLEI ++G ++L +++ + ++ Sbjct: 642 PTE---INDVIIQAAALASQFNEERQQGRDKLLEISASGKGTIESLVDALNAPELAHSVE 698 Query: 717 AFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQF 776 +F + D +GI + +L P+D L P L ++G+TIT+ R+VA ARE+ F Sbjct: 699 SFMHLICDALGIAHIVNDAHSFILQPTDQ-LAHAIPSLPDEGLTITYRRDVATAREELSF 757 Query: 777 ITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFL 836 I+W+HPLI +D+I S G +++S + N ALP G VE +Y+++A N +L Sbjct: 758 ISWDHPLIHEAIDIITSEVNGKASLSFMSNTALPAGAFFVECLYILQANTDNTTGFNPYL 817 Query: 837 PPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIE 896 P TPV + LD GN++ + +L V+R KLV A+ + + +L EA + Sbjct: 818 PQTPVLIQLDSQGNSM------NNVSVELTKVDRKLSQKLVPALAKPIKLVLAKAEALAQ 871 Query: 897 KSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWR 956 + ++ +AA +L AE++RL L+ VNP+I D E+ ++S +Q + +A Sbjct: 872 ERVASVKEAAHEFIHTQLGAEITRLTELQKVNPSISDIEIAHMQSTLEQAQTRIQEATLY 931 Query: 957 LDALRLIVVT 966 LDA+R+++ Sbjct: 932 LDAIRVVINN 941 >UniRef50_Q1Q8E0 Helicase-like n=22 Tax=Gammaproteobacteria RepID=Q1Q8E0_PSYCK Length = 1028 Score = 878 bits (2268), Expect = 0.0, Method: Composition-based stats. Identities = 388/976 (39%), Positives = 564/976 (57%), Gaps = 38/976 (3%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F +GQR++SDTESELGLG V+ VD R V +LFP + E R+YA++ +P++RV+F GD+I+ Sbjct: 79 FAVGQRYLSDTESELGLGVVIDVDDRCVHILFPQSEETRVYAKNSAPLSRVVFKVGDSIS 138 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 G V V+E G+L Y E A+ E L + + +KP +RL AG+I+R Sbjct: 139 DQAGKSYTVNAVEEVMGVLKYSV-----NEHEKAIMETRLAANITLAKPLERLLAGRIER 193 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 D + LR + S P GL G R +I HQL IAH+VG+R APRVLLADEVGLG Sbjct: 194 SDWYDLRQDILRMQSALAGHPLKGLMGARVDIIEHQLYIAHEVGKRIAPRVLLADEVGLG 253 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH-- 240 KTIEAG+I+HQQLL+G AERVLI+VP++LQ+QW++E+ RRFNL FALFD R A + Sbjct: 254 KTIEAGLIIHQQLLTGKAERVLILVPDSLQYQWMIELRRRFNLNFALFDLVRTAAIKEHD 313 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSE-DAPSREYQAI 299 N F TEQ VI +D + EA +DLLVVDEAHHL W E + +Y I Sbjct: 314 PEQNVFMTEQCVIAGMDLLLDHPDLYDQAMEAGFDLLVVDEAHHLHWDEAQGGNDKYDLI 373 Query: 300 EQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML 359 AE GV+LLTATPEQLG +SHFARLRLLDP+RF D +F++ Q + A ++L Sbjct: 374 ADFAEETAGVMLLTATPEQLGAQSHFARLRLLDPDRFDDLDEFIDGQDAFAETAAVASLL 433 Query: 360 LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 + LS+ ++ L ++ E L N D + R ++ L+DRHGT R+LFR Sbjct: 434 IEDKPLSDGQIAALSSLLTISIDE--LATINED----EKLRTYALNELLDRHGTGRILFR 487 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 NTR VKGF R LPLP + + + +G + E+++ E Sbjct: 488 NTRESVKGFYGRSSQPYPLPLPEAWVDSYQTNGKLR---------------EQLWGEENQ 532 Query: 480 DNATWWNFDPRVEWLMGYLT-SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 + W DPRV WL+ L + +KVL+I AT LE VLR GI+ A+F E M Sbjct: 533 PDGGWLEDDPRVPWLIDILKGELKHKKVLLIARSGATVESLEAVLRLHAGIKTAIFTEQM 592 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 +++ERD+AAA+FA+ + GAQ+LLCSEIGSEGRNFQFAS ++++DLP NPD LEQRIGRLD Sbjct: 593 TLLERDQAAAFFADGE-GAQILLCSEIGSEGRNFQFASQLILWDLPANPDTLEQRIGRLD 651 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ I +HVPY++ TAQ L +WY+ L+ F PT +++ + +L L D Sbjct: 652 RIGQTQQIMLHVPYVQGTAQERLYQWYNNALNMFNQISPTAQSVQEQYIQELKPMLEGAD 711 Query: 659 QTEG---FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 D+I + + L+ QL+ GRDRLLE +S A +A+++ + D L Sbjct: 712 NDVNRAILADIIAEAAQTRQGLETQLQAGRDRLLEYNSCRPRVAGRIADAMRDFDGHNLL 771 Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPD----FPGLSEDGITITFDREVALAR 771 F F I + + D V++P D + D P EDG+T+TF+RE AL R Sbjct: 772 PQFIERFFASANIEHNIQRDGSWVISPIDSTEISDYIDGLPLGDEDGMTLTFEREQALQR 831 Query: 772 EDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQ 831 ED FIT EHPL++ +L + G++T+++LK+ A+P G +++E+ + VEA APK L Sbjct: 832 EDIAFITHEHPLMQAIYELASTSTFGNTTVAMLKSAAVPQGMVMLEVNFRVEAIAPKLLN 891 Query: 832 LNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLG 891 L L +R+ + + G++L+A++ + + ++++ +++ + Sbjct: 892 LPATLSTQNIRVFISEQGSDLSARISADMIMPHIERLDKNRARQVIKVRGDVIEQRYYEA 951 Query: 892 EAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLD 951 E + + + A ++ S E+ RL+ L+ +NPN+R E+ +E + Q ++L Sbjct: 952 EDIARQQLTEIGEQASARFSQQWSREIKRLKHLQTINPNVRPAEIERLEQLKLQGEQALA 1011 Query: 952 QAGWRLDALRLIVVTH 967 D++R++V Sbjct: 1012 GLSLVPDSIRVLVAVK 1027 >UniRef50_A0Z260 ATP-dependent helicase HepA n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z260_9GAMM Length = 917 Score = 875 bits (2260), Expect = 0.0, Method: Composition-based stats. Identities = 392/964 (40%), Positives = 565/964 (58%), Gaps = 50/964 (5%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F +GQRW+S + ELGLG VV +D R +TL FP+ GE R YA +P+TR++ GD Sbjct: 4 FAVGQRWVSHADVELGLGIVVELDGRRITLHFPAVGEERTYATDRAPLTRLILESGDRYQ 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 +G + V E E G+L Y+ E+ + E+ +D + P+DRL Q+D+ Sbjct: 64 HINGQEYAVLERHESEGILAYLIESAAGEQE--LVSELDIDPHIQLRSPRDRLLNNQLDK 121 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 + F LR+ K + GL G RTSL+ HQ+ IA +VG R APRVLLADEVGLG Sbjct: 122 LLDFQLRFETLKQRAHFSGSAVRGLLGARTSLLSHQVYIASEVGTRIAPRVLLADEVGLG 181 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTIEAG+IL QQL SG A R LI+VP++L HQWLVEMLRRFNL F+LFD +R + + D Sbjct: 182 KTIEAGLILSQQLASGRASRALILVPDSLIHQWLVEMLRRFNLAFSLFDSDRLNDLEID- 240 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 + F++EQL++C +++ A+WD+++VDEAHHL + IE L Sbjct: 241 -SAFESEQLILCPFSLVAQNEDARLSALSAQWDMVIVDEAHHLSRQNSQEETLSRFIEAL 299 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 A H G+LLLTATPEQ G+ESHF RLRLLDP+RF D F+ EQ+ + + +L +G Sbjct: 300 AGHCSGLLLLTATPEQAGIESHFDRLRLLDPDRFSDLNTFLAEQEQFSEWNRIIELLQSG 359 Query: 363 NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR 422 Q+ L + D++ A RQ L+DR+GT RVLFRNTR Sbjct: 360 -----------------QNTVTLPPGIDQDTDSASQIRQ-----LLDRYGTGRVLFRNTR 397 Query: 423 NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNA 482 V GFP R L++ L P Y++A ++ E Sbjct: 398 ASVPGFPNRHLNSYPLEAPELYRSAS----------------------SELFPEMSFSEP 435 Query: 483 TWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 W DPRV WL L + R +KVLVI A A TAL LE L R GIR A FHEG++++E Sbjct: 436 EWLEHDPRVAWLESQLRALRPEKVLVIAANATTALALEHQLHLRAGIRCAAFHEGLTLVE 495 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 RDRAAA+FA+E GAQ L+CSEIGSEGRNFQFA H++ FDLP NPDLLEQRIGRLDRIGQ Sbjct: 496 RDRAAAYFADEHGGAQALICSEIGSEGRNFQFAHHLICFDLPKNPDLLEQRIGRLDRIGQ 555 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG 662 D+ IHVP++ +AQ VL +W+ + L+AF +C G T+ L + LA+P T Sbjct: 556 TADVSIHVPFIRDSAQQVLFQWHDQALNAFTRSCAVGYTVLQQFLEPLNSALAAP--TSP 613 Query: 663 FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNL 722 + L+ N +L+ Q+ +GRDRLLE++S+ + ++ SI+ ++ +++FA L Sbjct: 614 IEKLLANSLALRTSLETQMREGRDRLLELNSHDANRGASIIASIQGEETPEQVLSFAELL 673 Query: 723 FDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHP 782 FD IG++QD + +L P++ ++ + PGLSEDG + FDRE AL R+D F+T EHP Sbjct: 674 FDRIGVSQDYHTETTHLLKPTEMLITGELPGLSEDGTVVCFDRETALVRDDVSFLTLEHP 733 Query: 783 LIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR 842 L+R + ++LS + G+S + LK+ +P GT+L+E +Y ++ AP L++ R++ TP+R Sbjct: 734 LLREAMAVVLSSELGNSALGTLKHPKIPGGTVLLECVYSLDCMAPNYLEMGRYVDQTPLR 793 Query: 843 MLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARAL 902 ++D + + + NR + + T + ++ ++ + L+ +A + Sbjct: 794 FVIDPKCIDRGQTIGHQALNRMIGPITTATAANVMRRIRSLLEQQLKAADALAKSELELR 853 Query: 903 IDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRL 962 A +E+L AE SRL LR+VNP +RD E++ +E+ + + S++ A ALR+ Sbjct: 854 KRQAVQTINEQLGAEHSRLVYLRSVNPAVRDSEISELEARIAKTLASVNDAQAVSQALRV 913 Query: 963 IVVT 966 ++ T Sbjct: 914 VIAT 917 >UniRef50_B9XDU2 SNF2-related protein n=1 Tax=bacterium Ellin514 RepID=B9XDU2_9BACT Length = 943 Score = 872 bits (2253), Expect = 0.0, Method: Composition-based stats. Identities = 403/963 (41%), Positives = 561/963 (58%), Gaps = 38/963 (3%) Query: 10 ISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQM 69 +S++E ELGL TVV V +LF +TGE R YA ++P+ RV F GDT+ ++D ++ Sbjct: 1 MSESEPELGLATVVHTGEGRVQVLFSATGETRTYASDNAPLKRVRFRIGDTVKTNDDKEL 60 Query: 70 QVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALR 129 V+EV E+ GLL Y+G A+ E L + L P+DRLFAG+ D F LR Sbjct: 61 TVKEVIEKEGLLLYVG-------QDQAVPEAELSASLSLRGPEDRLFAGRFDEPATFELR 113 Query: 130 YRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGM 189 + + P G G R LIPHQL IA +V R APRV+L+DEVGLGKTIEAG+ Sbjct: 114 RLTLELLHRLRKSPVRGFVGGRIDLIPHQLYIAQEVASRQAPRVMLSDEVGLGKTIEAGL 173 Query: 190 ILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA--EAQHDAYNPFD 247 ILH+ LLS A R+L++VPE+L HQW VEMLRRFN+ +FD+ER A EA NPF Sbjct: 174 ILHRLLLSERANRILVLVPESLVHQWFVEMLRRFNVWLNIFDEERCAAIEAGDPGANPFL 233 Query: 248 TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVP 307 +QLV+ S++F S R A WD+LVVDEAHHL WS++ PSREYQ +E+L+ Sbjct: 234 DDQLVLTSINFLASSPTRSAQAVAAGWDVLVVDEAHHLKWSKENPSREYQIVEELSRQSE 293 Query: 308 GVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSN 367 G+LLLTATPEQLGMESHFARL+LLDP+R HD A F+ E ++Y+P AD LL G K + Sbjct: 294 GLLLLTATPEQLGMESHFARLQLLDPDRHHDLASFLAESRDYKPTADIAEKLLTGKKPTR 353 Query: 368 DELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKG 427 ++ LG + L + + A Q L+ L+D HG RVLFRNTR G+ G Sbjct: 354 KDITFLGNLFAHN--AELKEHLEKVGKGNAEASQALLKDLLDMHGPGRVLFRNTRAGMTG 411 Query: 428 FPKRELHTIKL-PLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWN 486 FPKR H KL P P + +VS E + Sbjct: 412 FPKRSAHLAKLDPGPKAEEWLDRVSTEFAVDA----------------GEANLKASLDLT 455 Query: 487 FDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRA 546 DPR+ WL+ L QKVL+IC ++ LR I+ +FHEG+++++RDR Sbjct: 456 KDPRILWLVDLLQKLDPQKVLLICRTIEKVEAIDAALRRHVSIKTGIFHEGLTLVQRDRN 515 Query: 547 AAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 AAWFAE D GA++LLCSEIGSEGRNFQFA H+V+FDLP NP+LLEQRIGRLDRIGQ DI Sbjct: 516 AAWFAEAD-GARLLLCSEIGSEGRNFQFAHHLVLFDLPLNPELLEQRIGRLDRIGQTKDI 574 Query: 607 QIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI---YDSVYNDLINYLASPDQTEG- 662 IHVPYL + Q VL RWYHEGLDAFE G + + +DL + D++E Sbjct: 575 HIHVPYLAHSPQEVLARWYHEGLDAFEKNLEGGNELLLRFGRAVHDLALEFSVADRSEAD 634 Query: 663 --FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 DL++ + L+ LEQGRDRLLE++S A+ + E I+++D T+L + + Sbjct: 635 QELADLLERTADGRRELRQVLEQGRDRLLEMNSFRAPVARQIIELIQKEDRQTDLEDYLL 694 Query: 721 NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE 780 ++FD G++ ++ + L P ++ FP + +G+ T DR AL RED F+TW+ Sbjct: 695 SMFDHFGVHIEELAPHTWQLNPQG-IITDSFPAMPAEGLIATCDRRRALGREDIGFLTWD 753 Query: 781 HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP 840 HP++ ++L+L + G+ + ++L TLL+EL +++EA A +L ++RFLP TP Sbjct: 754 HPMVTGAMELLLGSEAGNCSFAVLPTAG--ERTLLLELAFILEAIAAPRLHMDRFLPATP 811 Query: 841 VRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR 900 +R++++ N++ + +L + + + + A+L E A Sbjct: 812 IRLVINHKLENVSESHPGKVLEERLRKGSPYKLLDNEQLARGTLPAMLHHASTLAETGAE 871 Query: 901 ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL 960 L AA E ++ L E+ RL+ LR VN +IR E+ E ++Q+ ++ QA RLD+L Sbjct: 872 TLRQAALKEMNQLLGHEVQRLKTLRQVNDHIRPQEIIMAEEQQKQLATTILQARTRLDSL 931 Query: 961 RLI 963 RLI Sbjct: 932 RLI 934 >UniRef50_B4DAH6 Helicase domain protein n=2 Tax=Verrucomicrobia RepID=B4DAH6_9BACT Length = 916 Score = 868 bits (2243), Expect = 0.0, Method: Composition-based stats. Identities = 381/962 (39%), Positives = 544/962 (56%), Gaps = 61/962 (6%) Query: 4 TLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITS 63 GQRW+SDTE ELGLG ++ + V + FP+ E R YA +P+ RV F+ GD I + Sbjct: 7 IPGQRWVSDTEPELGLGIILKAEYGRVEVFFPAAMEQRQYALKSAPLRRVRFHEGDRIKT 66 Query: 64 HDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRM 123 +G Q+ V ++E +G+L Y+ G + E L + FSKP+DRL AGQ+D Sbjct: 67 SEGQQLLVTTIEERSGMLVYLA-------EGQEVTEAQLSDTISFSKPEDRLLAGQVDEN 119 Query: 124 DRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGK 183 F LR A + + G G R LI HQ++IA +V R PRVLLADEVGLGK Sbjct: 120 ATFDLRGEALQRRCRHRQSAVRGFVGGRVDLITHQMSIAGEVASRLVPRVLLADEVGLGK 179 Query: 184 TIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD-- 241 TIEAG+ILH+ L+G A+R+L++VPE+L HQW VEMLRRFNL F+LFD+ER + + Sbjct: 180 TIEAGLILHRLHLTGRAQRILVLVPESLVHQWFVEMLRRFNLLFSLFDEERCVSIEQNDP 239 Query: 242 AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 NPF QL+ICS F + QR + + A WDLLVVDEAHHL WS +A S +Y +E Sbjct: 240 TANPFLDSQLIICSTAFLSGNAQRAQQVLAAGWDLLVVDEAHHLEWSHEAVSPQYALVES 299 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLA 361 LA+ G+LLLTATP+QLG E HFARLRLLDP+R+ + +F+EE ++Y VA A+ L+ Sbjct: 300 LAKQTKGLLLLTATPQQLGPEGHFARLRLLDPDRYDNLERFMEEAEHYEQVAKAIDRLID 359 Query: 362 GNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT 421 G L+ + + G Q + Q + + + AR L+S L+D GT RV+FRNT Sbjct: 360 GKPLTKSDRTVFG-----QKSSRIRQRCDELAAGDEKARAALISDLLDEFGTGRVMFRNT 414 Query: 422 RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDN 481 R + GFP+R+ + L Sbjct: 415 RAALSGFPERQAKLVSLDAGK--------------------------------------- 435 Query: 482 ATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSII 541 T + +++WL+ L +KVL+IC ++ + L+ + A+FHE ++++ Sbjct: 436 -TGAELEAKIKWLVALLKEFAEEKVLLICRTRELVEEISERLQRELNVAVALFHEELTLL 494 Query: 542 ERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 +RDR AA+F+EE+ GA++L+CSEIGSEGRNFQFA H+V+FDLP +P+LLEQRIGRLDRIG Sbjct: 495 QRDRNAAFFSEEE-GARILICSEIGSEGRNFQFAHHLVLFDLPEDPELLEQRIGRLDRIG 553 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 Q IQIHVPYL TA VL RWYHEGL+AFE I ++ DL L Sbjct: 554 QTATIQIHVPYLRGTASEVLARWYHEGLNAFEKNPHGASEIVRALEKDLA-ALRQKFSAA 612 Query: 662 GFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 + LI R+ + +LE G DRLLE++S A+ L I D D F + Sbjct: 613 KLEKLITKSRDLSGKVAKKLEHGHDRLLELNSCKVGVAEELTRQIRALDTDEKFEHFVIG 672 Query: 722 LFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEH 781 L D G+ +D G +L P H++ FP + E+G+T+TFDR AL+RED F++ +H Sbjct: 673 LLDHFGVQVEDHGVRSYILRPG-HLITDAFPTVPEEGMTVTFDRTRALSREDLGFVSGDH 731 Query: 782 PLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPV 841 PL+R LDL+L + G++ + K +L+E+ VVE AP L +RFLP TP+ Sbjct: 732 PLVRASLDLLLGSERGNTAFGMWKGGG--SEGMLLEIYTVVECIAPAALHADRFLPATPI 789 Query: 842 RMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARA 901 R+++D + + + +L + ++ + A+L+ +A + A+ Sbjct: 790 RVVVDHALADHTD--DEAVASAKLEKGDIFRLLDRGAVKKKLLPAMLEKAQAMAAERAQR 847 Query: 902 LIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALR 961 LI+AA +L E+ RLE LR +N ++R +E+ AI + + ++ A RLDA+R Sbjct: 848 LIEAANTAMTLQLRNEIERLEDLRQINDHVRPEEIEAIRQQQTDLQAAIAAAQPRLDAVR 907 Query: 962 LI 963 LI Sbjct: 908 LI 909 >UniRef50_B5JQV3 Type III restriction enzyme, res subunit family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQV3_9BACT Length = 953 Score = 853 bits (2203), Expect = 0.0, Method: Composition-based stats. Identities = 384/970 (39%), Positives = 554/970 (57%), Gaps = 36/970 (3%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 + +GQR++S+ E ELGLG V VD V L FP++GE R+YA + + RV+F G+ + Sbjct: 3 TYAVGQRFVSEPEPELGLGLVEEVDGYRVGLNFPASGEKRIYAAGAAVLKRVIFREGERV 62 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 + G VE ++E +G+ Y G G + RE L + FS PQDRL +GQ++ Sbjct: 63 NTLTGASFAVEAMEEVDGIFVYSG-------EGQSAREDELVAAGSFSHPQDRLMSGQVE 115 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 + F LR RA ++ G G R LIPHQ I +V R PRVLL+DEVGL Sbjct: 116 DSEVFDLRQRALLMQNKIRSSELRGFFGGRLDLIPHQYYILKEVSSRQLPRVLLSDEVGL 175 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA--EAQ 239 GKTIEA +IL + G A+R LI+VPE L HQW VE+LRRF L F +FD+ER EA Sbjct: 176 GKTIEACLILQRLRAVGRAQRALILVPEPLVHQWFVELLRRFGLWFGIFDEERCRALEAS 235 Query: 240 HDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAI 299 ++ NPF EQLV+CS+D+ S+ R EA WD+++VDEAHHL WS + S EY + Sbjct: 236 NEGGNPFLDEQLVLCSVDYLANSEVRSWQAIEAGWDIVIVDEAHHLEWSPEEVSPEYALV 295 Query: 300 EQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML 359 E L E PG+LLLTATP QLG+ HFARLRLLDP+R+ D F EE + VA+ A + Sbjct: 296 ESLGERSPGLLLLTATPTQLGLAGHFARLRLLDPDRYSDLDTFQEEMSGFEKVAEIAAKI 355 Query: 360 LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 + ++L N + L ++ +D + L + S AR L+ L+D HGT RV+FR Sbjct: 356 IDEDELDNSDAAALQDIF-HRDQDGLKKRLADLSAKKPGARDSLIKALLDEHGTGRVVFR 414 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 NTR +KGFPKR PL ++ + + + D D+ Y Sbjct: 415 NTRANMKGFPKR--MYCPAPLKSEGNQTLLAKLVRELEAESTDSESDIRY---------- 462 Query: 480 DNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMS 539 + DPR+ WL+ +L + + K L+IC A+ LE LRE I +FHE + Sbjct: 463 ----NFKGDPRLVWLVSFLKARKGVKTLLICKSRQKAIALETALRESLNISIGLFHEELQ 518 Query: 540 IIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDR 599 +++RDR AAWFAEED GAQVL+CSEIGSEGRNFQFA H+V+FDLP NP LLEQRIGRLDR Sbjct: 519 LVQRDRNAAWFAEED-GAQVLICSEIGSEGRNFQFAQHLVLFDLPINPGLLEQRIGRLDR 577 Query: 600 IGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYL----- 654 IGQ IQIHVPY+ + Q V+ W H+GLD FE G L++ Sbjct: 578 IGQTSTIQIHVPYVVGSPQEVVAEWCHQGLDGFESCVHGGAEYLARFGERLVSLAIEYGS 637 Query: 655 ASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTN 714 + + + I + L A+L +GRDRLLE++S GE A+ + + + ++D+N Sbjct: 638 GKKAKRDKLEAFIDETQAFRSELSARLSKGRDRLLELNSFNGEVAKEVVREVRKAENDSN 697 Query: 715 LIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDA 774 L +F +L + G+ D++ D ++L PS H V FP L +G TF+R A+ RED Sbjct: 698 LKSFLFDLLEFYGVRVDEQEDGDVILDPS-HAYVESFPSLPAEGTLATFERRRAITREDM 756 Query: 775 QFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNR 834 FIT +H L+ + +DL+++ + G S SL ++ L +E+++V+E A L ++R Sbjct: 757 MFITQDHSLVSDAIDLLVTSEKGVSAFSLHESDDP---GLSLEVVFVLETVALSHLHVDR 813 Query: 835 FLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQ 894 FL PTP+R+++D GN+L+ + + L + + + ++ + A++ E Sbjct: 814 FLSPTPIRVVVDIRGNDLSEERDLAWVEENLEPGDINRFLERPGFSREFLEAMIGGAEEI 873 Query: 895 IEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAG 954 EK + L A + +A + L E+ RL L+ +N N+R +E+ ++ Q V +++D + Sbjct: 874 AEKRVKRLKTAFKTKAKKVLQHEIERLMDLQKINDNVRSEEIAIAKAELQGVNQAIDDSC 933 Query: 955 WRLDALRLIV 964 RLD+LRLIV Sbjct: 934 LRLDSLRLIV 943 >UniRef50_A6VZC5 Helicase domain protein n=2 Tax=Marinomonas RepID=A6VZC5_MARMS Length = 942 Score = 843 bits (2179), Expect = 0.0, Method: Composition-based stats. Identities = 378/981 (38%), Positives = 537/981 (54%), Gaps = 56/981 (5%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 + GQRW S E +LG+G +V ++ TL FP +R Y+ + + R GD + Sbjct: 1 MYQTGQRWSSRNEPDLGVGMIVDTQNKSFTLHFPDAEADRQYSNDQTSLVRRTLTVGDQL 60 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDT--EESGVALR---EVFLDSKLVFSKPQDRLF 116 D V EV+E N L+ Y + D EES + + LDS L S P R+ Sbjct: 61 HFQD-ETFTVLEVEEINDLIEYRISEDDDWLEESIIQFPRNDKNELDSLLALS-PARRM- 117 Query: 117 AGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLA 176 F LR ++ + P GL G + L+PHQ+ +AH++ R R LL Sbjct: 118 --------WFDLRRHTLEHQAANAASPVRGLMGLKAELLPHQIYLAHEIANRPKARALLC 169 Query: 177 DEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA 236 DEVG+GKT+EAG+ILHQ+LL+G +RVLI+ P LQHQWLVEMLRRF+ F+L ++ Y Sbjct: 170 DEVGMGKTLEAGLILHQRLLNGLCKRVLILTPTNLQHQWLVEMLRRFHQPFSLINESVYE 229 Query: 237 EAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREY 296 + NPF+ + VI +D+A + + +H+ +AEWD+++VDEAHHL W + PS Y Sbjct: 230 DFMEGDDNPFEQQPFVISPIDWASQHPKATQHMLDAEWDMVIVDEAHHLAWHPETPSIGY 289 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAV 356 Q + +LA +LLL+ATPEQ G HF+RL+LLD + +HDF + +Q+ ++ A+ Sbjct: 290 QVVARLAAKTESLLLLSATPEQTGEREHFSRLQLLDADHYHDFEHYQTQQQAFKQAAELA 349 Query: 357 AMLL-----AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS-EDAQSARQELVSMLMDR 410 LL + + D G + E + QA S S + A +E +S L+DR Sbjct: 350 EALLPFSQEDSSPAALDWNKAFGSYLQEVSAKDWFQALTSKSGAEQTEAAKEAISWLIDR 409 Query: 411 HGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP 470 HGT R +FRNTR V GFP R LH+ L +++A Sbjct: 410 HGTGREMFRNTRAAVGGFPDRYLHSYPLDNNEHFESA----------------------- 446 Query: 471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIR 530 +R Q W DPR WL +L KVLVIC A A L L G + Sbjct: 447 DRHVQPETEVPDGLWEKDPRWVWLKEFLECQA-DKVLVICHTADMAQWLNDQLT-FAGFQ 504 Query: 531 AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLL 590 +A FHE M +I RDRAAA+FA+ED GAQ+L+CSEIGSEGRNFQF+ H+VM+DLP +PDLL Sbjct: 505 SADFHEQMPLIHRDRAAAYFADED-GAQILVCSEIGSEGRNFQFSHHIVMYDLPEHPDLL 563 Query: 591 EQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDL 650 EQRIGRLDR+GQ +D+QIHVPYL+K+ Q L WYH L+AF T +G + ++ + L Sbjct: 564 EQRIGRLDRLGQLNDVQIHVPYLKKSVQERLFNWYHHALNAFCRTTGSGDKVEEAFGDSL 623 Query: 651 INYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQD 710 YL D DL+K HEAL Q+E+GR+RLLE+ S E+A+AL E I Q Sbjct: 624 HAYLHGQDDDT---DLLKEANIYHEALLKQMEEGRNRLLEMSSCRPEQARALIEQINNQ- 679 Query: 711 DDTNLIAFAMNLFDIIGIN----QDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDRE 766 L + + I DD L PS M++ PG+ E+G + DR Sbjct: 680 ATKGLHHYIEQVTHAFNIYADCINDDPDRAAWFLRPSTDMMLEALPGIEEEGKMLMLDRR 739 Query: 767 VALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQA 826 A RED F TWEHPLI +D + D+G T ++L ALP GT+LVE ++V+EA A Sbjct: 740 QASQREDVAFATWEHPLITMLMDEVQGFDSGKLTSAILPIAALPEGTVLVESMFVIEATA 799 Query: 827 PKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHA 886 +L+L + LP TP+ L D NG L Q + + +L V + V A+++++ Sbjct: 800 HPRLKLAQSLPMTPMWQLSDSNGKFLHQQFTADKWAEKLKGVPNRVAEQWVAALRKNLIE 859 Query: 887 ILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQV 946 +LQ + + AR ++ AA+ + E+ RL L+A N IRD+++ +E+N Q+ Sbjct: 860 VLQAHQLNAQDQARPIVHAAKTSYQHRCQNEIERLVELKAFNDTIRDEDIERLETNMQEG 919 Query: 947 MESLDQAGWRLDALRLIVVTH 967 + +D+ RLDA+R+I+ T Sbjct: 920 LTRIDEHQIRLDAIRIILTTK 940 >UniRef50_A6DT84 ATP-dependent helicase HepA n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DT84_9BACT Length = 943 Score = 838 bits (2166), Expect = 0.0, Method: Composition-based stats. Identities = 367/969 (37%), Positives = 557/969 (57%), Gaps = 43/969 (4%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 + GQR+ S++E ELGLG V+ + + +LFP+T RLY +PV RV G + Sbjct: 1 MYRAGQRYFSESEPELGLGVVLKHEFGNLEILFPATETRRLYVSESAPVKRVALRIGQSF 60 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 + +G ++ E++EE+G YI G +RE L + L S P+DRL G D Sbjct: 61 DA-EGEDFKITEIREEDGNFLYI------NAKGQEVREFQLPNHLSLSGPEDRLMMGSFD 113 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 F LR R + SEQ G +G R L+PHQ +A +V PRVLLADEVGL Sbjct: 114 DPHLFDLRRRTLMHQSEQLSSEIYGFQGARLDLLPHQFYVADEVSSMAKPRVLLADEVGL 173 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY--AEAQ 239 GKTIEAG+ILH+ LL G RVLI++P+ LQ+QW VEM R+FNL F+L DDER+ EA Sbjct: 174 GKTIEAGLILHRLLLRGDVTRVLILLPDALQNQWFVEMYRKFNLWFSLIDDERFKAVEAN 233 Query: 240 HDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAI 299 D NPF + L+ICS ++A S + E + + EWDL++VDEAHH+ W + S EY + Sbjct: 234 PDNDNPFLDDPLIICSTEYAAASAKVSEAIVQGEWDLIIVDEAHHISWRPETVSNEYLLV 293 Query: 300 EQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML 359 E+LA+ V ++LLTATP+QLG ESHFARLRLLDP+RF+D F EQ YR + L Sbjct: 294 EELAKKVERLVLLTATPDQLGEESHFARLRLLDPDRFYDLDVFKNEQSQYRDKVKGLDKL 353 Query: 360 LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 L KL + + +++G+Q PLL+ + + Q R EL+ L+DRHGTSRV+FR Sbjct: 354 LEAEKLDAKAMKLCEKLLGDQH--PLLERLKKEVLEGQ-LRHELLRELIDRHGTSRVIFR 410 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 NTR ++ FP R I L + G ++ E + PE+ Sbjct: 411 NTRKVMENFPVRCPRPIGLE-----AADLDFVGKEASQILEESDLDLFVCPEK------- 458 Query: 480 DNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMS 539 + +V+W+ L +K L+IC+ +EQ +R+ ++ AVFHEG+S Sbjct: 459 --------NVKVQWICETLKEKVDEKFLLICSSREKVEAIEQGIRQHMELKMAVFHEGLS 510 Query: 540 IIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDR 599 + +RDR A +F++ DTGA++L+CSEIGSEGRNFQF ++++FDLP NP LLEQRIGRLDR Sbjct: 511 LNQRDRNAVFFSQ-DTGARLLICSEIGSEGRNFQFCQNLILFDLPMNPGLLEQRIGRLDR 569 Query: 600 IGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS--- 656 IGQ DIQI PY + + +SVL +Y GLDAF G + + L + Sbjct: 570 IGQTADIQIFYPYRKSSVESVLADFYSLGLDAFARPLHGGEKMTQELKPYLEEVIVQWAE 629 Query: 657 --PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTN 714 +E +L+K + K QLE+GRD LLE++S E+ + +S+ + D++ Sbjct: 630 KIEGASEALAELLKVSSKLATETKCQLEEGRDHLLELYSFDPERGYEICQSLRKTDNEGA 689 Query: 715 LIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDA 774 L + +LFD +G++ D D + + P ++L D PGLS +G I R L RED Sbjct: 690 LFKYLEDLFDYLGVDCRDVEDAVYKIEPGQNLLC-DLPGLSREGNLIATQRAETLQREDV 748 Query: 775 QFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNR 834 +TWEHPL+R+G+D++ SG++G++ ++ + + ++++E + V+E P + +NR Sbjct: 749 ALMTWEHPLLRSGMDILSSGESGNNCFAICVDPS--SRSIILEAVLVLECLLPAKSGVNR 806 Query: 835 FLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQ 894 FLPPTP+ + +D G NL+ ++ +E + +L R V +Q + +L++ + Sbjct: 807 FLPPTPIFVRVDHRGRNLSTEIVYEECDLELGDPMRLMDKSAVK--EQLLPEMLRITQKL 864 Query: 895 IEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAG 954 ++ + +ID A+ + ++E++RL+ L+ N I+D+E+ + + + +M + ++ Sbjct: 865 AQEKSVKIIDEAQVKVKAYFASEMARLKDLQEKNSFIKDEEINDLNNAFELLMTEIPKSR 924 Query: 955 WRLDALRLI 963 R DALRL+ Sbjct: 925 IRQDALRLV 933 >UniRef50_B1ZQP7 Helicase domain protein n=4 Tax=Bacteria RepID=B1ZQP7_OPITP Length = 982 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 389/991 (39%), Positives = 548/991 (55%), Gaps = 40/991 (4%) Query: 1 MPF-TLGQRWISDTESELGLGTVVAVD--ARTVTLLFPSTGENRLYARSDSPVTRVMFNP 57 MP LGQR +S+ E ELGLG V +VD AR + + FP+TGE RLYA S + RV F Sbjct: 1 MPLEVLGQRCLSEREPELGLGIVASVDRAARRLGIDFPATGEKRLYALGTSVLKRVQFRA 60 Query: 58 GDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFA 117 GD++TS +G VE V+EE+GLL Y G +G LRE + S P +RL A Sbjct: 61 GDSVTSREGTTFTVETVEEEDGLLVYFG-------AGRRLREDGISDVTSVSSPAERLMA 113 Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLAD 177 GQ+D + F LR + + ++ + G G R LIPHQ I H+V R PRVLLAD Sbjct: 114 GQVDPGEVFELRSQVLEAQAQFRQSEVRGFLGGRIELIPHQFYILHEVAARQIPRVLLAD 173 Query: 178 EVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAE 237 EVGLGKTIEA +I+ + L G A RVLI+VPE+L HQW VE+LRRFNL F+++D+ER Sbjct: 174 EVGLGKTIEACLIVQRLLAVGQARRVLILVPESLTHQWFVELLRRFNLWFSIYDEERCTA 233 Query: 238 AQHD--AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 + NPF + QL + + F ++R E A WD++VVDEAHHL W+ DA S E Sbjct: 234 QEQSTPGENPFLSSQLALAGVRFLAADERRREQAIAAGWDVVVVDEAHHLAWAPDAASPE 293 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 Y +E LA PG+LLLTATP QLG+ HFARLRLLDP+R++DF +FV E + Y VA Sbjct: 294 YAIVEALARRAPGLLLLTATPTQLGLAGHFARLRLLDPDRYNDFDRFVAEAEGYATVAGV 353 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR 415 +LA L+ + L + + + L Q + +E AR+ L+ L+D+HGT R Sbjct: 354 AEKILAQKPLTPRDHAALKAIFQKDPVR-LEQHLAALAEAQPGAREALLKTLLDQHGTGR 412 Query: 416 VLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKS---------------- 459 V+FRNTR + GFPKR+ + L + A + + +S Sbjct: 413 VMFRNTRAAMSGFPKRKFCPVPLGVDLGAAAAGEPASAAPTDESDEDLLLELGEEPGAIV 472 Query: 460 --AEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATAL 517 A AR + EG+ + DPR++WL+ +L HR+ KVL+IC Sbjct: 473 SGAALLARAARELQAEESGTEGEIRYAFRGDPRIKWLVDFLRRHRTTKVLLICRSPRKVA 532 Query: 518 QLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH 577 +E ++ER I++A+FHEG+S+++RDR AAWFAE D GAQ+LLCSEIGSEGRNFQFA H Sbjct: 533 AIEAAVQERAAIKSALFHEGLSLVQRDRNAAWFAEPD-GAQLLLCSEIGSEGRNFQFAHH 591 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP 637 +V+FDLP NP LLEQRIGRLDRIGQ I+IHVPYL +A ++ WY GL+AFE Sbjct: 592 LVLFDLPLNPGLLEQRIGRLDRIGQTETIRIHVPYLTGSATECVIEWYQRGLNAFEAPLH 651 Query: 638 TGRTIYDSVYNDLINYLA----SPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHS 693 G L+ A D L+ + E L +L+QGRDRLLE+ S Sbjct: 652 GGDAYRQEFRARLLALAAKYRGGEIDRAELDRLVADTSAFREVLARKLKQGRDRLLELAS 711 Query: 694 NGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPG 753 A+++ E + D D + + + + G+ + + L PS + FP Sbjct: 712 FNRATAESVIERVRAADADPRVRQVLLAVLEHFGVEVKEHEAGDLALDPS-RAYLESFPS 770 Query: 754 LSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGT 813 + +G+ TF R A ARED +F++ +HPL+++ LDL++ G++ + + Sbjct: 771 VPAEGMLATFSRSRATAREDLRFLSADHPLMQDALDLLIDSPAGTAAFGTIVSDQP---N 827 Query: 814 LLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTG 873 LL+E ++V+E A + ++++FL PTPVR+L+D G +L A+ + R+ + H Sbjct: 828 LLLEAVFVLETVADSRWRVDQFLAPTPVRVLIDLRGTDLTAERDARAVAREFEDADIHRF 887 Query: 874 SKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRD 933 + + +L L A A L AE RLE LR +N +R Sbjct: 888 LERPGFDAPLLQRMLAAANGVAAARTGELKSEALARATAALDAEAQRLEDLRRLNDQVRP 947 Query: 934 DELTAIESNRQQVMESLDQAGWRLDALRLIV 964 +E+ Q +++QA RLD++RLIV Sbjct: 948 EEIELTRQQLQHTRTAIEQARLRLDSIRLIV 978 >UniRef50_C0QC91 RapA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC91_DESAH Length = 905 Score = 829 bits (2142), Expect = 0.0, Method: Composition-based stats. Identities = 366/973 (37%), Positives = 516/973 (53%), Gaps = 76/973 (7%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M GQR+ S+ E ELGLG +V D+RT+T+ F ++ R Y + +P+ RV F GDT Sbjct: 2 MQLKKGQRFTSEMEPELGLGVLVTSDSRTLTVNFAASNCVRRYTTAAAPLRRVRFEVGDT 61 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I D M +E V +GLL Y G +G + E L + S P+DRL+AG Sbjct: 62 IVFGDNRTMVIETVDNRDGLLVYGG-------AGECVPEQDLADTMSLSAPRDRLWAGIF 114 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D D F LR+ A + P G G R LIPHQ IA +V R+ PR+LLADE G Sbjct: 115 DPADTFDLRFEANRLRHAHETSPAMGFMGGRVDLIPHQFYIAGEVSNRYLPRILLADETG 174 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEA ++LH+ LLS RVLI+VPE+L HQW +E+ RRFNL F +FD E E + Sbjct: 175 LGKTIEACLVLHRLLLSERISRVLILVPESLVHQWFIELYRRFNLVFRIFDPELCRELER 234 Query: 241 D--AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA 298 NPF +EQLVIC LD + L +A WD++VVDEAHHL A Y Sbjct: 235 SEPGQNPFFSEQLVICCLDGMAADETSRIQLVQAGWDMVVVDEAHHLEEGGAA----YSL 290 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAM 358 +E LA G++LL+ATPEQLG +HF+ LRLLDP+R+ +F ++EE + YR A+ + Sbjct: 291 VEALATAQAGMMLLSATPEQLGRRNHFSHLRLLDPDRYTNFDDYLEESRQYRQTAETLEN 350 Query: 359 LLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLF 418 L + S + ++ L+D HG R +F Sbjct: 351 LADPGEDSQE-----------------------------------ITALLDSHGPGRAVF 375 Query: 419 RNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 RNTR +KGFP+R L T A+ A Sbjct: 376 RNTRAVIKGFPQRSGVLYPLVPKTDTTVALGRCDAPVA-------------------SLS 416 Query: 479 GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 + F ++EWL G L S + +KVL+ICA + A +E L ++ A F + M Sbjct: 417 MADDDPGVFFAKIEWLKGLLKSLKREKVLLICATSEKAAAIETALATLITMKIARFTQDM 476 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 ++++RDR+AAWFAE GA++++CSEIGSEGRNFQFA H+VMFDLP NP+L+EQRIGRLD Sbjct: 477 TLVQRDRSAAWFAE-PLGAELMICSEIGSEGRNFQFAHHLVMFDLPDNPELVEQRIGRLD 535 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ H I IHVPY + Q+VL RWY EG FE+ I+ L + D Sbjct: 536 RIGQHHPIVIHVPYAHDSRQAVLARWYREGTGIFENNISGIHQIHRQFAARLADLSDLCD 595 Query: 659 QTE-----GFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDT 713 Q D LI + R +L+ GRD+LLE++S KA+ L ++I E D D Sbjct: 596 QAGQVPYGALDQLIADTRTFAAETSKRLKSGRDKLLELNSFRPRKAEQLVKTICETDQDQ 655 Query: 714 NLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALARED 773 ++ F +F I+ + L + VP FPG DG+ +TFDR VA+ R+D Sbjct: 656 SIDLFMAKIFKFYAISPEPIMARTFRLEVFNSAGVP-FPGFKGDGMIVTFDRTVAVTRDD 714 Query: 774 AQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLN 833 F+TW+HP++ ++L L D G++ I+ + +L+E +Y +E AP+ L +N Sbjct: 715 IVFLTWDHPMVTGAMELFLGSDHGNAAIAEVNGTG--KFEILLESVYTLECVAPRALHMN 772 Query: 834 RFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEA 893 RFL TP+R L+D N NL+ + L+ R + +Q + +L G Sbjct: 773 RFLARTPIRTLVDHNLTNLSQDRSWALTAASLSTPARSWLGQFPEIKEQLLPELLAAGRR 832 Query: 894 QIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQA 953 E++A +I A+ ++ + E +RLE L+ +NP IR+DE+ + ++ +DQA Sbjct: 833 FSEQAAARVISRAKAAVEKVVGGEAARLERLKRINPAIREDEIRRAKDEATTLVIHIDQA 892 Query: 954 GWRLDALRLIVVT 966 RLD+LRLI V+ Sbjct: 893 RLRLDSLRLIKVS 905 >UniRef50_Q1MY01 ATP-dependent helicase HepA n=1 Tax=Bermanella marisrubri RepID=Q1MY01_9GAMM Length = 898 Score = 801 bits (2068), Expect = 0.0, Method: Composition-based stats. Identities = 322/966 (33%), Positives = 499/966 (51%), Gaps = 74/966 (7%) Query: 1 MP-FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGD 59 MP + GQR++S E ELGLG V + R +T+ FP + RLY+ + +P+ R F PGD Sbjct: 1 MPQYIEGQRYVSLAEPELGLGVVTGYENRQITIEFPLSETTRLYSANTTPLLRCRFEPGD 60 Query: 60 TITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQ 119 T+ + G + V +E +GL+ Y D S + E+ + P DRL +GQ Sbjct: 61 TVKTRTGEFICVSSSEEVDGLIEYH---YDGNHS---ISEIMIADDQGKVSPLDRLKSGQ 114 Query: 120 IDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEV 179 + L + + E G G + +L+PHQ ++A V PR LLADEV Sbjct: 115 LGSYKWQNLYQKLDRSMIEHQGRGSYGFVGPKINLVPHQFDVAQQVLSMPLPRALLADEV 174 Query: 180 GLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQ 239 GLGKTIEAG+++HQ ++SG A+R+LI VP +L +QWLVEM R+FNL L DDE Sbjct: 175 GLGKTIEAGLVIHQLMVSGRAQRILICVPASLVNQWLVEMRRKFNLNCTLIDDEFC--QN 232 Query: 240 HDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAI 299 + NPF+ Q+ +C+ D+ Q +E +WD++V+DE+H L W S Y++ Sbjct: 233 QEGSNPFNQVQVALCNFDWLT-HSQYMEQALSTQWDMMVIDESHRLQW----QSEAYRSA 287 Query: 300 EQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML 359 L++ G LLLTATPEQLG+ESHFARL LLDP RF D QF+ E+K Y V++ V Sbjct: 288 LALSKVSSGALLLTATPEQLGVESHFARLHLLDPLRFPDLEQFLNEEKQYALVSELVD-- 345 Query: 360 LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 ++ + L I D + L + AN E+ Q+ V + DR+GT R+++R Sbjct: 346 ----RIEMEGLAACLADIEALDDQRLSELANDYVEN-GKDEQQFVDWMSDRYGTGRMVYR 400 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 NTR + GFP+R + L + Sbjct: 401 NTRRSIAGFPQRHIEFHHLKDQSHE----------------------------------- 425 Query: 480 DNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMS 539 EWL +L S +KVL+IC +A A L + + I + FHEG S Sbjct: 426 ------------EWLKEWLESLGDEKVLIICKQAEQARDLSEFINTHTLIESGAFHEGYS 473 Query: 540 IIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDR 599 +IERD+ AA F E D G Q+L+ SEIG EGRNFQ A ++V++DLP +PDL++QRIGRLDR Sbjct: 474 LIERDQIAAQFVEPD-GLQILVSSEIGGEGRNFQHAKYLVLYDLPSHPDLVDQRIGRLDR 532 Query: 600 IGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQ 659 IGQ DI +H+P ++ QS L YH GLD F P IY++ ++ + L + + Sbjct: 533 IGQGSDIYVHIPLQSRSEQSRLAALYHHGLDLFNQPNPAAAPIYEAYSYEIEDMLETGEN 592 Query: 660 TEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFA 719 E +I C++ L ++EQGRD+LLE HS ++ L +SI+E D++ + + A Sbjct: 593 AEA---VIMQCQQACFQLLDEIEQGRDKLLEQHSFSKDRVSPLLDSIKELDEEQDTLRHA 649 Query: 720 -MNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFIT 778 ++FD I+ + G V+ P ++ + E+ TITFDR A RED +FI+ Sbjct: 650 LFDIFDHSHIDIETAGAGNFVVRPGENCPFSFMNDIQEEAATITFDRNKAALREDLEFIS 709 Query: 779 WEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPP 838 W+HP +R LD + + + +L ++ L GT +VE + +A P +L+LNR+L P Sbjct: 710 WDHPWMRGMLDDLEAAGNAYTACALFEDDKLANGTAVVECYFDFKANGPGRLELNRYLAP 769 Query: 839 TPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKS 898 R + ++ N + + E + +++ + + + L E + Sbjct: 770 QSRRYFITEDLKNATSHLSEEDMTERFKPISKEMAREAIELKWGSIQNAAMLAEKLAIHT 829 Query: 899 ARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLD 958 + I A + ++ +EL+R ++L + P E+ A+ + ++ + L A +L Sbjct: 830 TQNSIGEAVEKLLDQSKSELARYKSLEMM-PGAYQAEIDALTTRTKEAIGLLQNAKPQLK 888 Query: 959 ALRLIV 964 ++ + + Sbjct: 889 SITVWI 894 >UniRef50_Q21K39 Helicase-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21K39_SACD2 Length = 874 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 328/966 (33%), Positives = 502/966 (51%), Gaps = 100/966 (10%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRW+ D+E ELGLG VV +D RTVT+LFP R Y +P+TR+ F GD I Sbjct: 4 FVQGQRWVVDSEPELGLGMVVGMDERTVTILFPEVDTERRYNAQQAPLTRIQFEVGDEIQ 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 +G V V E+NG+L Y ++G + E L + ++P RL GQ+D+ Sbjct: 64 PREGEPQIVATVHEQNGVLVYE------TQNGQLVVETMLAGSIRLNQPYMRLITGQLDK 117 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 + F R + ++ + G G R +LIPHQL +A R RVLLADEVGLG Sbjct: 118 PNWFHFRRKFDNAMTKAWCSGLKGYLGVRANLIPHQLYVATSACNRERVRVLLADEVGLG 177 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KT+EAG+IL + L R LIIVP+TLQ QWLVE++R+F+L +L+D E Y Sbjct: 178 KTLEAGLILSRLLKLERVSRALIIVPDTLQVQWLVELVRKFSLYPSLYDGEGY------- 230 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 F + I + E+L ++D+ +VDEAHH+ S + ++ L Sbjct: 231 --DFGNAGVHIVPHSVLITEQ---ENLLSHDFDIAIVDEAHHI----SMESEGFAVLKML 281 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 + + ++LLTATPEQLG ESHFARL+LLD +F DF F+ ++ Y ++ + L AG Sbjct: 282 STLLNHLILLTATPEQLGAESHFARLQLLDAAKFTDFDSFISQENTYAELSKRIQDLPAG 341 Query: 363 NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR 422 +++ + +EP + ++ L+D+HG RV+FRN R Sbjct: 342 KD----------QLVADLGLEP-------------GDDEFVIKQLLDQHGVGRVMFRNAR 378 Query: 423 NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNA 482 V GFP R +L Sbjct: 379 KAVAGFPARICLPHQLEED----------------------------------------- 397 Query: 483 TWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 +D + EWL +L ++ QK LVIC A T + E L E+ GI AVF+E ++IE Sbjct: 398 ---GWDSKFEWLAQWLKANPKQKALVICHTADTVKECELYLWEKHGIDVAVFYEEQTLIE 454 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 RD++AA+FA+E+ GA++LLCSEIGSEGRNFQF+SH++ DLP +P+LLEQRIGRLDRIGQ Sbjct: 455 RDKSAAYFADEERGARILLCSEIGSEGRNFQFSSHLICLDLPDHPELLEQRIGRLDRIGQ 514 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG 662 +D+ +HVP ++ + + WY++ L+ E P I+D + S D Sbjct: 515 KNDVSVHVPCHPESDTAKQLFWYNDILNCVEQQNPASTAIHDKYWQQDSLSWGSAD---- 570 Query: 663 FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNL 722 + RE+ L+ ++ +GRD LLE++S A LA+SI + + T Sbjct: 571 ----LAEIREELAQLQLKIVEGRDALLELNSCRQPFADQLAQSIADFEQATP-EELVSEA 625 Query: 723 FDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHP 782 +++ + + D + L PSD ML+P PGL +G+ +T+DR++A +RED F+TW+ P Sbjct: 626 SELLQFHYEQTFDGIFSLIPSDKMLIPALPGLPAEGVELTYDRDIANSREDLHFLTWDSP 685 Query: 783 LIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR 842 I +L+ + GS+++++L ++ LP G L+E+ + Q+P + F+ + VR Sbjct: 686 FIEGLWELLHHSELGSASVAMLPSRQLPAGHCLLEVCFDFMIQSPAAKECLPFIQESSVR 745 Query: 843 -MLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARA 901 ++LD N+L+ + L V +H +++ + ++ + + E A Sbjct: 746 SLVLDVGENDLSGILPESALEANLQGVKKHLAREVIKSRKEAIPQWFKKAEDISVAKKSA 805 Query: 902 LIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQ-AGWRLDAL 960 + AA A E+ RL+ L+A NP I D E+ +E Q V +++ A +L A+ Sbjct: 806 VQAAATERAQSFFEGEIKRLKTLKAKNPLIDDAEIALLEVKSQAVQHAINHAAHLQLSAI 865 Query: 961 RLIVVT 966 RLIV+T Sbjct: 866 RLIVIT 871 >UniRef50_C5BJV2 RNA polymerase-associated protein RapA n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BJV2_TERTT Length = 879 Score = 789 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 341/966 (35%), Positives = 505/966 (52%), Gaps = 93/966 (9%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRW+ D+E ELGLG V V+ARTV++ FP R YA + +P+TR+ +N D I Sbjct: 4 FVQGQRWVVDSEPELGLGIVTGVEARTVSIFFPQGECERNYATAQAPLTRIQYNIDDRIE 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 DG + +V V E+ GLL Y + E L +++ ++P RL GQ+D Sbjct: 64 LADGSEAKVVHVHEQGGLLIYDIGGDR------LVPETMLAAEVSLNQPLVRLLTGQLDA 117 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 F R + + ++ GL G R +LIPHQL +A RVLLADEVGLG Sbjct: 118 PKWFYFRRQLDAAMGKTWQSRLGGLLGVRANLIPHQLYVAWMACEHEKVRVLLADEVGLG 177 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTIEAGMIL + L R LI+VP+ LQ QWLVE++R+F L LF DE +HD Sbjct: 178 KTIEAGMILSRLLKFERVARALILVPDALQVQWLVELVRKFGLMPVLFSDE-----EHD- 231 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 F + Q+ I R+ L AE+D+ +VDEAHH++ S + +E L Sbjct: 232 ---FSSGQIHIVPHS---RADALSVELQAAEFDITIVDEAHHIL----PESEAFVCLEAL 281 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 + ++LLTATPEQLG ESHFARL+LLDP +F + E++ +Y+ + + L AG Sbjct: 282 SATSDHLVLLTATPEQLGAESHFARLQLLDPAKFSSLEKLHEQEAHYQSLNQRIRALPAG 341 Query: 363 NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR 422 +E ++ ++ + Q LV L+D HG RV+FRN R Sbjct: 342 RDALIEEYHLAKDI----------------------SDQALVDQLLDSHGVGRVMFRNVR 379 Query: 423 NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNA 482 + + GFP+R+ L + Sbjct: 380 SAIAGFPQRQAVAHSLSDDS---------------------------------------- 399 Query: 483 TWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 + R EWL + +H +K+LVIC + A E L ++ GI AA+FHE ++IE Sbjct: 400 ----WATRFEWLAQFSRAHPDEKILVICRQLAQVKDCENYLWQKHGIDAALFHEEQNLIE 455 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 RD+AAA+FA+ + G+Q+L+CSEIGSEGRNFQF+ H+V DLP +PDLLEQRIGRLDRIGQ Sbjct: 456 RDKAAAYFADSEHGSQLLVCSEIGSEGRNFQFSCHLVCLDLPEHPDLLEQRIGRLDRIGQ 515 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG 662 D+ +HVP+ + ++ +W+++ L E P ++D V D+ + L S + Sbjct: 516 TRDVHVHVPFAAHSRTALQFQWFNDVLQCVEQQNPAAGPVHDKVVADVEDDLYS--EAVL 573 Query: 663 FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNL 722 ++LI R Q AL+A+++ GRD LLE++S A LA I + + DT A Sbjct: 574 TEELISQTRAQVAALQAEIQSGRDALLEMNSCRQPFADELAAGIADFEQDTP-QALVETA 632 Query: 723 FDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHP 782 D++ + + GD L PSD ML+P PG+ +G ITF+R +A RED F++W+ Sbjct: 633 SDLLNFHFEATGDASFSLIPSDKMLIPALPGIPPEGTEITFNRALASHREDLLFMSWDAT 692 Query: 783 LIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR 842 I +L+ D GS++++ L +K LP G L+E+ + V Q+ FL VR Sbjct: 693 FITGLWELLHHSDLGSASVATLPSKQLPAGHCLLEVCFDVVIQSRLATACLPFLTSHSVR 752 Query: 843 ML-LDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARA 901 L LD + +L++ + E + + V +H +V + + ++ + EA E+ + Sbjct: 753 TLVLDISDKDLSSLLPEEALQQNIQGVKKHLARDVVKSRKDEIGKWYEKAEAFAEQQQQT 812 Query: 902 LIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLD-QAGWRLDAL 960 L+ A +A AE++RL L N + DEL A+E R V +L+ A +L A+ Sbjct: 813 LLADALEQARAHFEAEITRLRNLAHNNAAVGRDELVALEERRDGVCNALEKHAHLQLSAI 872 Query: 961 RLIVVT 966 RLIV+T Sbjct: 873 RLIVIT 878 >UniRef50_C9RJU1 Helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJU1_FIBSS Length = 995 Score = 786 bits (2030), Expect = 0.0, Method: Composition-based stats. Identities = 327/1017 (32%), Positives = 502/1017 (49%), Gaps = 75/1017 (7%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F +GQR++S E LGLG V V RTV +LFPS G+ R+Y ++P+ R + G+T Sbjct: 1 MMFKIGQRYVSQAEPTLGLGIVSEVQGRTVKILFPSIGQARIYRTDEAPIERFVLQVGET 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 + S G V+ V+E+ G++ Y+G +G ++E L +K+ ++P A Sbjct: 61 VKSEKGVSFVVDSVREDAGIMVYVGR------NGKEMKESELSAKISTARPAVLFKALAD 114 Query: 121 DR--MDRFALRYR-ARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHA-PRVLLA 176 D R LR+ A + + P G+ G R ++IPHQ + + PR++L+ Sbjct: 115 DEVCSSRDFLRHEDAMEMYYKWISSPVRGMIGPRVNMIPHQYYLCYRACSSSTLPRLMLS 174 Query: 177 DEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA 236 DEVGLGKTIEAGMI H G +R L+IVPETL+HQW++EM RRFN F L D+ Sbjct: 175 DEVGLGKTIEAGMIWHALKSRGRIQRTLVIVPETLKHQWMIEMKRRFNQLFTLVDEGYIR 234 Query: 237 EA------QHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 NPF +I S+DF +E L + WD+ ++DEAHHLV + Sbjct: 235 GLFVGVAKDETKPNPFMQSNDIIVSIDFLMAQPALIEDLLKTNWDMTIIDEAHHLVCEDG 294 Query: 291 APSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR 350 S EY ++ GVLLLT TP QL ES F RL++LDP RF D+ F+++Q+ Y Sbjct: 295 FTSHEYMLANRVIGRSKGVLLLTGTPLQLHPESQFNRLKMLDPVRFADYNDFIKDQEAYL 354 Query: 351 PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDR 410 + + L ++ + I P L+ NS S A E + ++D Sbjct: 355 KLVRDLNKLPTDPNHHMSWDDLYECVPKNSQIRPWLEQENSKSMTAG----EWMRRIVDG 410 Query: 411 HGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP 470 GT V+FRNTR GV GFPKR L I L Y+ + V+ S + + +L Sbjct: 411 MGTGSVVFRNTRKGVGGFPKRVLDEIPLEPNPAYREMVDVAADRDLEASTDIQENGLLCT 470 Query: 471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIR 530 + W D R WL G+L ++++KVL+IC LE +L E G Sbjct: 471 RF---------SDAWAMDERFVWLKGFLKEYKNEKVLLICESIQVVQALETLLLEFLGEG 521 Query: 531 AAV-FHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDL 589 A V FHE MSI+ RD+AAA F++ D GA +L+ SEIGSEGRNFQF+ H+V+FDLP + L Sbjct: 522 AFVMFHEDMSIMARDKAAANFSKPD-GANLLIASEIGSEGRNFQFSHHLVLFDLPLDAAL 580 Query: 590 LEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYND 649 +EQRIGRLDRIGQ DI IHVPY++ + Q V+ RWY+EGL++F +G ++ Sbjct: 581 VEQRIGRLDRIGQDKDIIIHVPYVKGSGQEVMFRWYNEGLNSFGAPLMSGGELFLKYTES 640 Query: 650 LINYLASPDQTEG--FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIE 707 LI LA+P + +++I ++ E ++ +E GRDRLLE +S EKA+ + + I Sbjct: 641 LIEALATPRASLENFVENVIPQVKKDCEQMRKHIENGRDRLLEFNSRNPEKAKEITDEIR 700 Query: 708 EQDDDTNLIAFAMNLFDIIGINQDDRG-DNMIVLTPSDHMLVPDFPGLSE---------- 756 E D + L + G++ + + ++T + PG+ + Sbjct: 701 ELDAEPELKNLVFDSLMNRGLDVEKSSVQDCFLITMGPQVEAGSVPGMPDLAMAAATAGG 760 Query: 757 --------------------------DGITITFDREVALAREDAQFITWEHPLIRNGLDL 790 +T+TFDR+VA+ +D +FI+ +HPL + D Sbjct: 761 GRVNSQTDLCGEGGGDGDGDGRVSGGTCMTVTFDRDVAMTHDDIEFISLDHPLAQGVFDY 820 Query: 791 ILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGN 850 S G+ + ++ N L L+++ + VE ++ P ++L++ G Sbjct: 821 ETSFGRGTVSCAIWPNSGL--RGLMMQYNFAVELPVSEEWGCADIAGPKYFKVLVNAKGE 878 Query: 851 NLAAQVEFETFNRQLNAVNRHTGSKLVNA-VQQDVHAILQLGEAQIEKSARALIDAARNE 909 N++ + + L V G+ V+ ++ L + + A+ + A N Sbjct: 879 NMSEHF-EDLSDAALKDVGVPQGNAAVDMTLRYFAKDGLAKARLIVSEQAKKYAEEAANA 937 Query: 910 ADEKLSAELSRLEALRAVNPNIRDDE-LTAIESNRQQVMESLDQAGWRLDALRLIVV 965 + + E R+ L ++ E L + N Q+ + + RLDA+RL+V Sbjct: 938 VEARSEQEYQRMNHLLSMRGKAGTSEALKQLRKNVQERKKIVANPQLRLDAIRLVVC 994 >UniRef50_A4BDR8 Superfamily II DNA/RNA helicase, SNF2 family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BDR8_9GAMM Length = 883 Score = 756 bits (1951), Expect = 0.0, Method: Composition-based stats. Identities = 320/964 (33%), Positives = 482/964 (50%), Gaps = 91/964 (9%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRW+ D+E ELGLG V +VDAR V L FP + R YA D+P+TR + G+T+ Sbjct: 4 FVQGQRWLVDSEPELGLGMVQSVDARAVLLYFPDSDTERQYALRDAPLTRYTLDVGETLD 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 D + + V NGL+ Y T + E L K+ + P RL GQ D Sbjct: 64 HRDQGEKTIAVVHSMNGLIVYETT------DQQMVPETELADKVKRNNPMVRLLTGQTDH 117 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 + FA R + +GL G R++L+PHQL +A R LLADEVGLG Sbjct: 118 PNWFAFRSALNSGIQAIWSTHLNGLLGTRSTLLPHQLYVARSATEHSHVRALLADEVGLG 177 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTIEAG+I+++ G R+LI VP LQ QWLVE++RRF+L ++ +HD Sbjct: 178 KTIEAGLIINRLRQQGRIRRILIAVPPALQAQWLVELIRRFSLFCEMYQG-----PEHD- 231 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 F Q+ + + S++ L H+ E +WD+LVVDEAHHL D + Q Sbjct: 232 ---FAIGQVHLIT-HTELTSEETLAHISEQDWDMLVVDEAHHLNTEADEADSLH--WSQF 285 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 A +P +LLLTATPEQLG +SHF RL+LLD RF F Q+ ++ ++ + D L Sbjct: 286 ARQLPHLLLLTATPEQLGQQSHFGRLQLLDAGRFASFEQYQADEASFADLTDIARAL-NE 344 Query: 363 NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR 422 N+++ D + Q +E L + +D+ A +S L+DRHGT RV++RNTR Sbjct: 345 NQVTPDVI---------QQLESLGISWQNDAHQA-------LSALLDRHGTGRVVYRNTR 388 Query: 423 NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNA 482 GV GF +R+ D Sbjct: 389 KGVSGFHRRQ----------------------------------------------ADLE 402 Query: 483 TWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 + + RV+ L +L ++R +KVL+I TA L L G+ A FHE + +IE Sbjct: 403 LFASDSDRVKALAQWLKTNRDEKVLLIAHDKETAKSLAYELWHDFGVDATSFHEDLDLIE 462 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 RDRAAA FA+ D GA +L+CSEIG EGRNFQF H++++D+P +PD LEQRIGRLDRIGQ Sbjct: 463 RDRAAAHFADVDDGAHILVCSEIGGEGRNFQFCHHLILWDIPSHPDSLEQRIGRLDRIGQ 522 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG 662 I IH L+ + +WYH+ L E + P TI++ D G Sbjct: 523 TQTIGIHAYLLQNSDDQRRYQWYHDLLGCVEQSQPAAGTIHEQFAEDWF--------ARG 574 Query: 663 FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNL 722 D L + R+Q L QLEQGRD LLE++S +A + IE + + L + Sbjct: 575 DDALADSIRKQMRELTEQLEQGRDILLELNSCRQPEADNIRNQIETLEQNHPL-SVVEMA 633 Query: 723 FDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHP 782 +++ ++ + + + L PS +ML+P PG+ E G +TFDR++A RED F++WEHP Sbjct: 634 ANLLNLHFESIANGIYELIPSSNMLIPVLPGIPEGGAVVTFDRQIASQREDTLFLSWEHP 693 Query: 783 LIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR 842 I+ D++ + G ++I+LL+++ +P G LL+E+ + V L L R Sbjct: 694 FIQGLADMLQGSELGQASIALLESEQVPAGQLLMEVQWSVSVPERLTHALKPHLNTALFR 753 Query: 843 MLLDKNG-NNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARA 901 L+ + G +L+ + + Q+ + K++ ++ + + + + E Sbjct: 754 TLVLEGGVKDLSGVLSEDALQAQIKTLPVKIARKMIREAKERISPLYETSQTLAEDRFNT 813 Query: 902 LIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALR 961 ++ R A + R+ L +VNP + ++ ++ E+L Q + +R Sbjct: 814 ALEETRASLVAANQARVERMSYLASVNPIVTQADVEKLKIQTLLEEEALSQCEFSTSGVR 873 Query: 962 LIVV 965 LI+ Sbjct: 874 LILC 877 >UniRef50_Q08VX8 Type III restriction enzyme, res subunit family n=3 Tax=Cystobacterineae RepID=Q08VX8_STIAU Length = 1102 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 272/1032 (26%), Positives = 432/1032 (41%), Gaps = 103/1032 (9%) Query: 1 MPFTLGQ--RWISDTESELGLGTVVAV--DARTVTLLFPSTGENRL-YARSDSPVTRVMF 55 M G R++ + E G+G + A+ + + FP+ + + + S + Sbjct: 93 MSLVEGLKVRYL--PQPEWGVGHLAALMEEGAKAVVFFPAREDAPVLVSTKGSALVAYAL 150 Query: 56 NPGDTITSHDGWQMQVEEVKEE---NGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQ 112 G+ + + G V V EE GL Y+ DT E + E L + S Sbjct: 151 PAGEPVVTVKGRAATV--VSEEPGARGLRRYVIRYTDTGEEDE-MPESELRALPPRSDLL 207 Query: 113 DRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR 172 L G++ F LR +A E+ L R + PHQ+ + V PR Sbjct: 208 STLREGRVGDAKAFTLRKQALVLDDERRCDALGALLASRVMVKPHQVGVVQRVLSARRPR 267 Query: 173 VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD 232 +LADEVGLGKTIEAGM+ L+G A RVL++ P L QWLVE+ +FN F L D Sbjct: 268 FVLADEVGLGKTIEAGMVFSALRLAGLARRVLVVAPSHLTVQWLVELFHKFNQLFTLMDS 327 Query: 233 ERYAEA--QHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAE--WDLLVVDEAHHLVWS 288 +RYA++ + +P++ LV+ SL+ R+++ + E WDL+++DEAHHL Sbjct: 328 DRYAQSLKEQPDVSPWERFPLVVTSLELLSRTEEHRRAVAADEAFWDLVIIDEAHHLKGE 387 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 + ++A + LAE+ G+LLLTATP QL + L L+D F E Sbjct: 388 -----KAFEAAQGLAENSWGLLLLTATPMQLDPAEYHGLLTLIDAATAPTVKGFEERLAR 442 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM 408 ++ AV LL G + ++ + G+ ++ L R L+ L Sbjct: 443 QEELSSAVRALLEGGEPASAVKALAKRFPGDAKLQGL------------KDRDALLEHLA 490 Query: 409 DRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDML 468 + + S L RN R V GF R LH + L + + + A S + Sbjct: 491 ETYSLSDRLVRNRRAVVGGFSSRRLHRHPVQLSAEELKTRDAALAVLAGASLRGAPLANV 550 Query: 469 YPER------------IYQEFEGDNATWWNFDPRVEWLMGYLT----SHRSQKVLVICAK 512 + N D ++ +G L R KVLV Sbjct: 551 MRRLESSPSAFAGAVSANPALKAANLKLPARDAKLNAFLGVLRGIWAQEREAKVLVFTES 610 Query: 513 AATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNF 572 T L+ L REGI A +H + ++ERDR A F + + G QVLLC+E+G EGRNF Sbjct: 611 RDTLEALQAEL-GREGIEALGYHGDLPLVERDRQVARFRDPE-GPQVLLCTEVGGEGRNF 668 Query: 573 QFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAF 632 QFA H+V +DLP++P +EQRIGRLDRIGQ+ ++IHV T S ++ + + F Sbjct: 669 QFAHHLVHYDLPWSPATVEQRIGRLDRIGQSKPVEIHVFDPAGTLASDVLMLLADAVGVF 728 Query: 633 EHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIH 692 T + + V + L P E + + EA +AQ+++ D LL++ Sbjct: 729 GETVGGLDAVLEEVEDRLAELALLP--REARVAYAAELKAKVEAARAQVKRAYDPLLDLR 786 Query: 693 SNGGEKAQAL-----------------AESIEE------QDDDTNLIAFAMNLFDIIG-- 727 S + L AE +E+ +D D L L +G Sbjct: 787 SFDKPAVERLVTRAQTRMGIEVDEDEEAEPLEDGLWGVARDLDERLEESVTELAKRVGIR 846 Query: 728 INQDDRGDNMIVLTPSDHML-VPDFPGLS--EDGITI-TFDREVALAREDAQFITWEHPL 783 ++ DD D H L V PGL ED + TF R+ A+ E+ ++ H L Sbjct: 847 VDTDDEVDAFQCAFHFGHALNVEGLPGLDVMEDRTVLGTFWRDTAVEAEELEYFATGHSL 906 Query: 784 IRNGLDLILSGDTGSSTISLLKNKALPVGTLL---VELIYVVEAQAPKQL---------Q 831 + + G G S ++ GTL +E +Y V+ P+ Q Sbjct: 907 VEALFGFLRDGPYGRSGFRFIE----KRGTLKAKGLEFLYHVQLPEPEDTSPGARVPSRQ 962 Query: 832 LNRFLPPTPVRMLL-DKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQL 890 L RFL T + + + + G + A+ ++ V A + + Sbjct: 963 LARFLERTLLHVAVAEGQGGPKVDASLLSSLEADGKALKGDEVARAFPGFSVFVEAAVPV 1022 Query: 891 GEAQIEKSARALIDAARNEADEKLSAELSRLE-AL--RAVNPNIRDDELTAIESNRQQVM 947 + E L A+ + + A L+R++ +L + ++ ++L A + +++ Sbjct: 1023 AKKAAEAELGKLAVKAKKAIEAERDAALARMKLSLGHQGLSAEAVQEQLDAEGMHYDRLL 1082 Query: 948 ESLDQAGWRLDA 959 +L A LD+ Sbjct: 1083 RALSGAKVSLDS 1094 >UniRef50_UPI0001698444 ATP-dependent helicase HepA n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698444 Length = 555 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 259/563 (46%), Positives = 343/563 (60%), Gaps = 13/563 (2%) Query: 277 LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 +++DEAHHL WSED PS EY +E LA + PG+LLLTATPEQLG HFARLRLLDP+RF Sbjct: 1 MIIDEAHHLAWSEDDPSPEYLLVEALALNTPGILLLTATPEQLGRAGHFARLRLLDPDRF 60 Query: 337 HDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAA---NSDS 393 H F+ E++ YRP A+A+ L+ LS D + + GE++ LL +SD Sbjct: 61 HSLEAFLAEEQAYRPAAEAIDRLMQRTPLSEDAQAQILDQFGEEECAKLLAMISDADSDE 120 Query: 394 EDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGI 453 +SAR L+ +L+DRHGT RV+FRN R G+ GFP+RE H LP P Y I Sbjct: 121 AQRESARSALIELLLDRHGTGRVMFRNNRAGISGFPEREFHGYPLPNPECY----DAEQI 176 Query: 454 MGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKA 513 + + D L PERI+ WW DPRV WL +L + K+L+ICA A Sbjct: 177 DPQQSAPPDA---WLTPERIH--AAAGLKEWWRTDPRVSWLCRFLRENPEPKLLLICAHA 231 Query: 514 ATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ 573 TA++L++ LR EGI AA+FHEGMSIIERDRAAAWFA+ D G+++LLCSEIGSEGRNFQ Sbjct: 232 QTAIELQEALRSLEGIGAALFHEGMSIIERDRAAAWFADPDQGSRILLCSEIGSEGRNFQ 291 Query: 574 FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFE 633 FA H+V+FDLP NPDLLEQRIGRLDRIGQ +++HVPYL Q LVRWYHEGLDAF Sbjct: 292 FAHHLVLFDLPLNPDLLEQRIGRLDRIGQQQTVRVHVPYLSPGPQERLVRWYHEGLDAFH 351 Query: 634 HTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHS 693 HT P TI+ + L L + + L+ E + +L+QGRD LLE+ Sbjct: 352 HTVPGAHTIFSQLAPALQQVLEEDEAEAELEPLLAATAELRQQTAQRLQQGRDHLLELAG 411 Query: 694 NGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPG 753 A + I D + L + LF G + G+ VL P++ + PG Sbjct: 412 CRQPLADQIVRQIRSLDSSSRLYEYCERLFGCFGAEVEPLGNG-FVLRPAEQISNNRLPG 470 Query: 754 LSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGT 813 L +DG+T+TFDR ALA ED QF+TWEHP++R + ++S ++G+S+ L++ + G Sbjct: 471 LPDDGLTLTFDRADALAHEDRQFLTWEHPMLREAMQQVISQESGNSSAIALRHPEMKPGQ 530 Query: 814 LLVELIYVVEAQAPKQLQLNRFL 836 LL+E ++ +E AP + L Sbjct: 531 LLIEALFQIECIAPCRTAGGALL 553 >UniRef50_B9LWH1 Helicase domain protein n=3 Tax=Halobacteriaceae RepID=B9LWH1_HALLT Length = 988 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 201/980 (20%), Positives = 370/980 (37%), Gaps = 105/980 (10%) Query: 55 FNPGDTITSHDGW-QMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQD 113 F GD + G ++ E + G L TE L L D Sbjct: 4 FEVGDHVKFAGGQGEITKIEDRPNGGQLL---HVYTTEGELRKLP-SGLPHIERIDSIID 59 Query: 114 RLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV 173 RL A QID LR RA + + L R + P+Q+ A+++ + R Sbjct: 60 RLAARQIDSPIHHDLRERATRLDLAYRYDRFLSLTNNRIEIEPYQVQAAYEILNSYDHRY 119 Query: 174 LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDE 233 L+ DEVGLGKTIEAG+++ + + G AERVLI+ P L QW EM +F+ F ++D E Sbjct: 120 LIGDEVGLGKTIEAGIVIEELIARGRAERVLIVAPAPLTVQWQEEMREKFDRNFVIYDRE 179 Query: 234 RYA--EAQHDAYNPFDTEQLVICSLDFARRS-----------KQRLEHLCEAEWDLLVVD 280 H N ++ E L+I S+DFA+++ + L++L E WD+ V D Sbjct: 180 TVENHRQSHPNQNVWEQEDLIITSIDFAKQTNDDPESDRVSVRDALDNLNE-SWDVAVFD 238 Query: 281 EAHHLVWSEDA-----PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNR 335 EAHHL + ++ Y E +AE+ +LL+T TP + + + + LLDP R Sbjct: 239 EAHHLTARRGSDDSIERTQRYTVGEAVAENSDALLLMTGTPHKGKSDQFYFLVSLLDPYR 298 Query: 336 FHDFAQFVEEQKN---YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQD-------IEPL 385 F +Q + + R + D + + LG + + E + Sbjct: 299 FSHESQINPDALDDLMIRRLKDDMHDTDGTRMFPEKNIEALGVDMSRAERKLYDDVTEYI 358 Query: 386 LQAAN-SDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPK-----------REL 433 + N + E+ Q+A +V + + ++ N ++ ++L Sbjct: 359 REYYNLAQQEENQAAGFTMVIYQKRLVSSIYAIQKSLENRMRAIQNDAVAEDLPDDVQQL 418 Query: 434 HTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEW 493 P + R + E + A D + + Sbjct: 419 IPRYSTEPETLTDTERERIEEALETVTVTLNRSQIQEELDRVKQLWQQAKSIQTDSKAQL 478 Query: 494 LMGY----LTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAW 549 L + L++ +K+L+ T L + + I A + + R Sbjct: 479 LKQFIDRILSNDPDEKILIFTEYTDTLEYLRDRVFDDHDI--AQVYGDLDQDRRREEMEK 536 Query: 550 FAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 F + A ++L ++ EG N QFA MV +DLP+NP ++QR+GRL R GQ ++I Sbjct: 537 F---ENEANLMLATDAAQEGLNLQFAHIMVNYDLPWNPIRIDQRMGRLHRYGQERTVEIR 593 Query: 610 VPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDL---INYLASPDQTEGFDDL 666 + + T +S ++ E + E + V D+ +A+ + D++ Sbjct: 594 NLFFKNTRESEILNLLVEKTNQIESDLGMRSDVLGRVLEDVDLDDTIMAAIAEDRPSDEV 653 Query: 667 IKNCREQHEALKAQLEQGRDRLLEIHSNG-GEKAQALAESIEEQD----DDTNLIAFAMN 721 + + E E K LE + L + ++ + + + IE + ++ Sbjct: 654 VADIDEAIEERKNALETVENEFLIRNRFDLSDEDEEILDVIERSQHGDVSEDDIEVLVRE 713 Query: 722 LFDIIGINQD-------DRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDA 774 FD G + G ++ L D + G + TF R+VA+ +D Sbjct: 714 FFDEFGGDIRGVRPGPARAGGDVFQLDVPDVLCGNQVAGRYDQ---ATFTRQVAMEEDDV 770 Query: 775 QFITWEHPLIRNGLDLILSGDT--GSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQL 832 +FI +HPL+++ ++ L + G + + ++ G L Y + + + Sbjct: 771 EFIALDHPLVQSLIEFCLDSNRIGGQVAVKVAEDGEPTPGILF---TYRLGYVSGAGEAV 827 Query: 833 NRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGE 892 L P + + G+ + EF + ++ + + + E Sbjct: 828 TEKLVP----LYVTAEGDVRTEKPEF----VDTVPPEEVVSTPPLDRLTSMAEDLHSVAE 879 Query: 893 AQIEKSARALIDAA-----------RNEADEKLSAELSRLEALRAVNPNIRDDELTAIES 941 + + + A R A++ E+S + R ++ + Sbjct: 880 MEAWEQVESFAGEAREEREREVEIKRQHAEQHFEEEISEWKD--------RLEDYQQQDE 931 Query: 942 NRQQVMESLDQAGWRLDALR 961 + + + A +L++LR Sbjct: 932 QGKDMSAPIGNAKRQLESLR 951 >UniRef50_Q04VV1 DNA/RNA helicase Superfamily II n=6 Tax=Leptospira RepID=Q04VV1_LEPBJ Length = 951 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 166/739 (22%), Positives = 288/739 (38%), Gaps = 77/739 (10%) Query: 127 ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIE 186 L A + S L RT L+PHQ+ + V PR +LADEVGLGKTIE Sbjct: 86 DLALTAYELKLTHAFDKLSALSNSRTRLLPHQIESTYIVVNSLRPRFILADEVGLGKTIE 145 Query: 187 AGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF 246 A +++ + + ++VLI+ P L QW E+ +FN F + + D + Sbjct: 146 AALVMKELIFRRGYKKVLIVTPSPLLVQWQQELKNKFNEDFEIV---KRRNFSTDGDKNW 202 Query: 247 DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHV 306 Q +I S+DF + + + E + + +WD+++ DEAH L +R Y E++++ Sbjct: 203 KNFQHIITSVDFIK-NPKYAEEILKTKWDIVIFDEAHRLRRDYHKITRSYLFAEKISKKC 261 Query: 307 PGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ--KNYRPVADAVAMLLAGNK 364 +LLLTATP + +E + + L+DPN + FV + N + D ++ +L + Sbjct: 262 ECLLLLTATPFRGKLEELYYLMHLIDPNILGPYHTFVNDYILGNKTDLKDKISKVLLRRR 321 Query: 365 LSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRH---GTSRVLFRNT 421 + IE + E R+E + ++ G ++F+ Sbjct: 322 -KIEVGGFTKRFAKTVKIELSIVEREFYEETTNYVRREYNLAMRTQNRAIGFVMIVFQKL 380 Query: 422 RNG-----VKGFPKREL-------HTIKLPLPTQ---YQTAIKVSGIMGARKSAEDRARD 466 + + KR+ H ++ + V + + Sbjct: 381 LDSSVFALISALTKRKFLLENRLHHIQQMECKLEEWDLDETEDVEEFVSGLDESVQLDLQ 440 Query: 467 MLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ---KVLVICAKAATALQLEQVL 523 L E + D + L + R + K ++ T L VL Sbjct: 441 SLKRELLSLNRLILLGKKIKEDKKSIKLKETILKLRKEGHSKFIIFTQFRTTQDFLASVL 500 Query: 524 REREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDL 583 + + +FH + ++ A F T ++L+C+E G EGRN QFA+ + +DL Sbjct: 501 SD---FQVTLFHGSLGADAKENAIVEFK---TKTEILICTEAGGEGRNLQFANVLFNYDL 554 Query: 584 PFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIY 643 P++P +EQRIGR+ R GQ ++ I + T ++ + FE + + + Sbjct: 555 PWSPLKIEQRIGRIHRFGQKDNVFIFNFASKDTVAERILEVLTNKIRLFEESIGSSDELL 614 Query: 644 DSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALA 703 ++ ++L D F + + + E +E+ D ++I G EK AL Sbjct: 615 GAIEDEL-------DFNSSFMKFVTGNKSRTE-----MEEEIDNRIKIAKKGFEKLGALV 662 Query: 704 ESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFP----------- 752 LI F NL D ++R N L FP Sbjct: 663 --------TPKLIDF--NLLDYYNHTLEERSFNNTHLEEFISRFTKIFPEEAGFKLIRKK 712 Query: 753 -------GLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTG-SSTISLL 804 G TFD E+AL + +F+ + H LI + ++ G + + Sbjct: 713 SQIYEIDSSQYKGKYGTFDSELALQNDSLEFLAFGHLLIDRTVSYLIQNQKGWGVSFHSV 772 Query: 805 KNKALPVGTLLVELIYVVE 823 NK V LVE +++ Sbjct: 773 SNKEYYV--FLVEFQFILN 789 >UniRef50_B9LVL0 Helicase domain protein n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LVL0_HALLT Length = 969 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 184/923 (19%), Positives = 357/923 (38%), Gaps = 84/923 (9%) Query: 55 FNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDR 114 PGDTI +D +V + L D V + +V ++ + + Sbjct: 4 LAPGDTILLNDN-PAEVIKTYSVGNLDYLRAYVEDVGVKTVCIADVDIEPQREQLGALEP 62 Query: 115 LFAGQIDR------MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRR 168 + A Q+ + F LR +A + + + L P+QL + V ++ Sbjct: 63 MTADQLHPDHDAVSAEWFDLRSQALQLQIAHEQGQLLSISNSLVRLEPYQLACVNWVMQK 122 Query: 169 HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFA 228 R L+AD+VGLGKTIEAG+IL + A+RVL +VP LQ +W+ +M R F++ Sbjct: 123 LRQRALIADDVGLGKTIEAGLILKELTARNRADRVLFVVPAHLQKKWIRDMDRFFDISPT 182 Query: 229 LFDDERYAEAQH---DAYNPFDT-EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHH 284 D + + + N +D Q ++ S+ F R+ ++ E L +A WD++VVDEAH Sbjct: 183 PADRQWVEGERRRLGEETNIWDQDHQQMVTSMAFLRQ-EEFREELDDAFWDVVVVDEAHK 241 Query: 285 LVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVE 344 ++PS+ + +E++A++ +LLL+ATP E+ + + +DP + + Sbjct: 242 AAKRGESPSKTSKMVERVADNSDSLLLLSATPHDGKGEAFRSLIEYIDPFLVAEDQDLSK 301 Query: 345 EQKNYRPVADAVAMLLAGNK----LSNDELNMLGEMIGEQD-----IEPLLQAANSDSED 395 E + + + + + D + EM E+ + ++ + SE Sbjct: 302 EAVDRVMMRRGKQTIYDDDGERIFPNRDVGTIPVEMTHEERQFYRAVTDYVKNVYNRSEQ 361 Query: 396 AQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMG 455 LM + S + +K R L + T + + S + Sbjct: 362 LNEPAVGFAMALMQKRLVSSI------GAIKATLSRRLANLVDQQSTTTNLSEEASAYLE 415 Query: 456 ARKSAEDRARDMLYPERIYQEFEGDNATWWNF---------------DPRVEW----LMG 496 E + E D D + + + Sbjct: 416 GEDLDEQDQQKAEEELSGLTITESDAQLEEEIETLRDLVSLAEGIPVDSKAQKVRRYIQQ 475 Query: 497 YLTSHRSQKVLVICAKAATALQLEQVLR-EREGIRAAVFHEGMSIIERDRAAAWFAEEDT 555 L ++K+L+ T + +++ E V H G+ +R R F + Sbjct: 476 LLEEQPNEKILLFTEYRDTLDYILDLVKDEPWADEILVIHGGVDKEDRTRIEDEFNHGQS 535 Query: 556 GAQVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLE 614 ++L ++ SEG + Q + H MV ++LP+NP+ LEQRIGRL R GQ ++ + E Sbjct: 536 --RLLFATDAASEGIDLQHSCHIMVNYELPWNPNRLEQRIGRLHRYGQEKEVTVWNFSFE 593 Query: 615 KTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYL--ASPDQTEGFDDLIKNCRE 672 T +S + + +++ + + + ++ L S E + E Sbjct: 594 DTRESKVFEMLQDKVESIRGQLGNTADVLGMLDDINVDSLIMESIRNDEPASATKEELEE 653 Query: 673 QHEALKAQLEQGRDR-LLEIHSNGGEKAQALAESIEEQDD----DTNLIAFAMNLFDIIG 727 + + L + +R L++ + E + + + +++ +D + +L F +G Sbjct: 654 LIDERQRTLAEWYERSLIDTTTFDEESRRKIQDVMDQSEDVYGSEADLREFFERGISALG 713 Query: 728 INQDDRGDNMIVLTPSDHMLVPDFPGLSEDGI---TITFDREVALAREDAQFITWEHPLI 784 + + G+N+ + + S DG TF+RE A+ E ++I+ + L+ Sbjct: 714 GDVEKAGNNLFRAELPESLR------RSRDGDPYGPFTFNREFAMDHEGIEYISPDAELV 767 Query: 785 RNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNR--FLPPTPVR 842 + + +L + G+ I LL P T + + ++ R LP Sbjct: 768 QELMQQVLDSEQGTVGIKLLPFVDDPGITYNYRVRF-----EDGTGEVIREEILP----- 817 Query: 843 MLLDKNGNNLAAQVEFETF--NRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR 900 + +D + ++ + + + L+ + I + I + Sbjct: 818 VFVDAAHRDPQQRLGQRVIGGDSIIGSPEEGRVRPLLEHER----EIRTSADRYISQRVE 873 Query: 901 ALIDAARNEADEKLSAELSRLEA 923 +L D + E+ EL LEA Sbjct: 874 SLRDELQQRRREETQQELDDLEA 896 >UniRef50_C7NT14 Helicase domain protein n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NT14_HALUD Length = 971 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 180/939 (19%), Positives = 354/939 (37%), Gaps = 77/939 (8%) Query: 54 MFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEE-SGVALREVFLDSKLVFSKPQ 112 F+ G + +G +V + + G + Y+ +D E V L +V + Sbjct: 5 TFSSGQQVI-LNGTSAEVIQTRTV-GDIEYLRAYIDGEGVKTVCLDDVDIQPHQTG---L 59 Query: 113 DRLFAGQID---------RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAH 163 + L Q+D F L +A K + + L P+QL + Sbjct: 60 ETLSGQQLDDLHPDHEAVSAQWFDLHTQATKLKLAHEQGQLLSISNSLVRLEPYQLACVN 119 Query: 164 DVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRF 223 V ++ R L+ D+VGLGKTIEAG+IL + A+RVL +VP LQ +W+ +M R F Sbjct: 120 WVMQKLRQRALIGDDVGLGKTIEAGLILKELSARNRADRVLFVVPAHLQKKWIRDMDRFF 179 Query: 224 NLRFALFDDERYAEAQH---DAYNPFDTE-QLVICSLDFARRSKQRLEHLCEAEWDLLVV 279 ++ + D + + N ++ + Q ++ S+ F R+ ++ L +A WD++VV Sbjct: 180 DVDLTVADRAWVEGERRRLGEEANIWNQDQQQLVTSMAFLRQ-EEFRSALRDAFWDVVVV 238 Query: 280 DEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDF 339 DEAH D+PS+ +E +A + +LLL+ATP E+ + + +DP + Sbjct: 239 DEAHKAAKRGDSPSKTANMVETVAGNSDSLLLLSATPHDGKGEAFRSLVEYIDPFLVAEN 298 Query: 340 AQFVEEQKNYRPVA--------DAVAMLLAGNKLSNDELNMLGEMIGE-QDIEPLLQAAN 390 + +E + + D + ++++ ++M + + + ++ Sbjct: 299 RELSQETVDRVMIRRGKTDIYDDDGERIFPDREVNSVSVSMTHDERQFYRAVTDYVKNVY 358 Query: 391 SDSEDAQSARQELVSMLMDRHGTSRV--LFRNTRNGVKGFPKRELHTIKL-PLPTQYQTA 447 + SE LM + S V + R + + T +L Y Sbjct: 359 NRSEKLNEPAVGFAMALMQKRLVSSVGAIHATLRRRLNDLLDEQTATDELSEEAEAYLDG 418 Query: 448 IKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNF------DPRVEWLMGY---- 497 + R E + + QE + D + + + + Sbjct: 419 EDLDEDDKQRAEDEIAGLTVASNDEQLQEEIDTLRDLVSLAEDLPVDSKAQKVRRFISQL 478 Query: 498 LTSHRSQKVLVICAKAATALQLEQVLR-EREGIRAAVFHEGMSIIERDRAAAWFAEEDTG 556 L +K+L+ T L ++ E V H + ER R F + Sbjct: 479 LEEQPDEKLLLFTEYRDTLDYLLDFVQDEPWAEEILVIHGDVDKEERARIEDEFNHGQS- 537 Query: 557 AQVLLCSEIGSEGRNFQFASHMV-MFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEK 615 ++L ++ SEG + Q + H++ ++LP+NP+ LEQRIGR+ R GQ ++++ + Sbjct: 538 -RLLFATDAASEGIDLQHSCHIMANYELPWNPNRLEQRIGRIHRYGQDREVKVWNFLFDD 596 Query: 616 TAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYL--ASPDQTEGFDDLIKNCREQ 673 T +S + ++ + + + ++ L S E + + Sbjct: 597 TRESEIFEMLQTKVEEIRSKLGNTADVLGILDDIDVDSLIMESIQNDEPPSATKEELEDL 656 Query: 674 HEALKAQLEQGRDR-LLEIHSNGGEKAQALAESIEEQDD----DTNLIAFAMNLFDIIGI 728 E + LE+ +R L++ + E + + E ++E +D ++ F + G Sbjct: 657 IEERQRTLEEWYERSLVDTSTFDAESRRQIQEVVDESEDVYGSAGDIREFFEQAVEAFGG 716 Query: 729 NQDDRGDNMIVLTPSDHMLVPDFPGLSEDGI--TITFDREVALAREDAQFITWEHPLIRN 786 + RG N+ + + PD ED TFDRE A+ E+ F+ + +++ Sbjct: 717 EFEKRGTNLYQAELPEDIRPPD-----EDATFGPFTFDREFAMEHEEITFVAPDTDVLQR 771 Query: 787 GLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLD 846 + +L D G + LL P T + + + + + + +D Sbjct: 772 LMARVLEFDRGDVGLKLLPFVDTPGVTYNYRVAF--------EDGTGEAIREETIPVFVD 823 Query: 847 KNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAA 906 + + V+ G + V + + + + + Sbjct: 824 AEQRDAQQGLGERVVEG--ETVSAKPGVDDIRTVVDAEDELREAADRYVSARVNEIKSDL 881 Query: 907 RNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQ 945 ++ E+ + EL L E IES ++ Sbjct: 882 SSKRHEETARELENLNEYA-------QSERERIESFIEE 913 >UniRef50_D1JIN1 Putative uncharacterized protein rapA n=1 Tax=uncultured archaeon RepID=D1JIN1_9ARCH Length = 1120 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 167/915 (18%), Positives = 330/915 (36%), Gaps = 101/915 (11%) Query: 126 FALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAH-DVGRRHAPRVLLADEVGLGKT 184 F A P + + +PHQ+ + R R L+AD+ G GKT Sbjct: 70 FFFWIEANILRLAYQFDPLLAVNVSQVDPLPHQIEAVYSYALRDPKIRFLIADDAGAGKT 129 Query: 185 IEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYN 244 I AG+I+ + + +LI+ P L++QW EM +F F L + R + N Sbjct: 130 IMAGLIIKELQYRNLVKNILIVAPGHLKYQWQREMKSKFGTNFTLVN--RSLMESNWGQN 187 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHL--------VWSEDAPSREY 296 ++T + S+DF ++ ++ L + WDL+VVDEAH + + ++ Y Sbjct: 188 IWETHNCCVASIDFLKQD-DIIQKLRASSWDLVVVDEAHKMSAYGYKTRKGPKVEKTKRY 246 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN------YR 350 + E L+E +L LTATP + E+ L LL P F +E K R Sbjct: 247 KVGEILSEIATHMLFLTATPHRGDEENFRLFLDLLRPGFFSKTDLLMESIKKGENPLFVR 306 Query: 351 PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQ----ELVSM 406 + + + N + +N + + + + E E A+ M Sbjct: 307 RLKEDMKDFKGNNLFTPRHVNTVNFPLTDDEKELYRAVTTYVKEYFDRAKDNRSITFAMM 366 Query: 407 LMDRHGTSRV--LFRNTRNGVKGFPKRELHTIKLPLPTQYQTAI---------------- 448 ++ R TS + R+ N K + K+ T Y+ Sbjct: 367 ILQRRLTSSTHAILRSLENRKKRLDELMKLPDKIKQDTDYERLKHITEEELEDMDEADRW 426 Query: 449 KVSGIMGARKSAEDRARDMLYPERIYQEF-EGDNATWWNFDPRVEWLMG-YLTSHRSQKV 506 K+ + A++ E+I + + + ++ L L++ K+ Sbjct: 427 KIEEKLMHLTLAQNLDEVKAEIEQIEELIGFAETVKAREIESKLVKLRDDILSNIGDMKL 486 Query: 507 LVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG 566 L+ T L L G + H M + R A F E Q+++ +E Sbjct: 487 LIFTEFRDTVDYLVAKLTS-WGYKVNTIHGSMGMDARIEAEHRFKNE---TQIMVATEAA 542 Query: 567 SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYH 626 EG N QF S MV +D+P+NP+ LEQR+GR+ R GQ ++ I+ + T + ++ Sbjct: 543 GEGINLQFCSLMVNYDIPWNPNRLEQRMGRIHRYGQDKEVFIYNMVSKDTREGQILDRLF 602 Query: 627 EGLDAFEHTCPTGRTIYD---------SVYNDLINYLASPDQTEGFDDLIKNCREQHEAL 677 + L A + ++D ++ + + + + E +L+++ L Sbjct: 603 DKLAAMREALGS-DRVFDVIGAVIPGSTLEEIIRDAITGQRRMEEIYELVEDIN--PAEL 659 Query: 678 KAQLEQ-GRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDN 736 K ++EQ L H + + + E+ E + + + + F G + Sbjct: 660 KHKMEQIFMTSLATRHIDYAGITRNVQEADENRLMPEYIQDYFLRAFKRFGGEY-KADGD 718 Query: 737 MIVLT--PSD-------HMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNG 787 + + P + + + + ITFD+ A A +++ HPL+ Sbjct: 719 IYRIKSIPFELRKLNEAYDFQSRYGKVERRYAKITFDKAAAKAHASYEYVAPGHPLLEAV 778 Query: 788 LDLILSG-DTGSSTISLLKNKALPVGTLLV---ELIYVVEAQAPKQLQL--------NRF 835 + + + G + EL + A A K++ R Sbjct: 779 NQNAIDSMGHADAVAVFGDETNVMEGVVWFIESELTDGLGAIAGKRIFCVYQNMKGELRK 838 Query: 836 LPPTPVR-------MLLDKNGNNL---AAQVEFETFNRQLNAVNRHTGSKLVNAVQ---- 881 + P+ + ++L+++ + ++E + ++ + Sbjct: 839 INPSVIWDIAPADDVVLNESMKRMLNKKREIEEYVVTEIMFPYREEIEARRTKESEIKRK 898 Query: 882 ---QDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTA 938 + + +LQ ++ + ++ + + + + E R L + D E+ Sbjct: 899 YGLRSLEFLLQESNDKLLHYQQQELEEGK-DMNLAIFNERERKTDLDDKRKKLVD-EIE- 955 Query: 939 IESNRQQVMESLDQA 953 +E ++ A Sbjct: 956 LEKQLTVSEHNIIGA 970 >UniRef50_A7NJN1 Helicase domain protein n=3 Tax=cellular organisms RepID=A7NJN1_ROSCS Length = 1129 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 168/734 (22%), Positives = 280/734 (38%), Gaps = 75/734 (10%) Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAH-DVGRRHAPRVLLADEVG 180 + L AR+Y P + + +PHQ+ + V + R L+AD+ G Sbjct: 70 SPRQVFLGLEARRYRYASLYDPLLAMNISKVDPLPHQIEAVYGYVLHQPRVRFLIADDPG 129 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 GKTI AG+++ + L G R+LI+ P L+ QW E+ RF+ RF L D R Sbjct: 130 AGKTIMAGLVIKEMKLRGLVRRILIVAPGHLRDQWQRELKERFDERFVLMD--RQTMRNR 187 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA----PSREY 296 N +++E VI SLDFAR+ + ++ L A WDL +VDEAH + + ++ Y Sbjct: 188 FGENAWESEFQVITSLDFARQ-EDVMQALAGAHWDLTIVDEAHKMAAYKYGDKMEKTKRY 246 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN------YR 350 + E L+ + +L LTATP + E+ L LL P F E + R Sbjct: 247 RLGELLSRNSTQLLFLTATPHRGDPENFRLFLDLLQPGAFATVDMLDESIRAGDNPLFIR 306 Query: 351 PVADAVAM-----LLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVS 405 + + + L ++ ++ E E+++ L ++ + A + Sbjct: 307 RLKEDLKDFEGKPLFLPRQVKTLTFDLGVESPAEKELYNALSRYVNEQYNKALASDRRRN 366 Query: 406 MLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRAR 465 + R L +T + +R+ ++ Q + A + D Sbjct: 367 VAFAMVILQRRLASSTYALYRSLERRKRRLEEMRQ--QANAFKEGRLSTPASAFSLDDVE 424 Query: 466 DMLYPERIYQEFEGDNATWWNFDPRVEW------------------------------LM 495 D+ ER QE + + +E L Sbjct: 425 DLSEEERWEQEAIWETLSGAENRAELEAELQTLEQLLQQARAIIEQENEVKLRHFRQALR 484 Query: 496 GYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDT 555 K+L+ T LE+ +R+ G R H GM + R A F E Sbjct: 485 TLQEQDPGAKILIFTESRDTLDYLERRMRD-WGYRVCTIHGGMPLDARIEAEKTFKNE-- 541 Query: 556 GAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEK 615 AQV++ +E EG N QF M+ +D+P+NP+ LEQR+GR+ R GQ ++ I Sbjct: 542 -AQVMVATEAAGEGINLQFCHLMINYDIPWNPNRLEQRMGRIHRYGQTREVTIFNLVAAD 600 Query: 616 TAQSVLVRWYHEGLDAFEHTCPTGR--TIYDSVYNDLINYLASPDQTEGFDDLIKNCREQ 673 T + ++ E LD + R + D ++ D L RE Sbjct: 601 TREGRVLHRLFEKLDEIRSALGSDRVFDVIDELFPGRDLARLLADAAANARTLEDILREI 660 Query: 674 HEALKAQ-LEQGRDRLLEIHSNGGEKAQALAE-SIEEQDD---DTNLIAFAMNLFDIIGI 728 + L Q RD+L E + + E ++ ++ AF ++ +G Sbjct: 661 EIQVDETYLRQVRDKLGESLATRYIDYTRIQEMNVRARERRLIPEYTQAFFQKAWEHLGG 720 Query: 729 NQDDRGD----NMIVLTPSDHMLV---------PDFPGLSEDGITITFDREVALAREDAQ 775 R + L L F L + +TFD+E+A+ A+ Sbjct: 721 EMRPRAEVRRRGFFTLEKIPVPLRTLAEQDSFKKRFGNLQKRYPLVTFDKELAMKESQAE 780 Query: 776 FITWEHPLIRNGLD 789 F+++ HPL L+ Sbjct: 781 FVSFGHPLFEAVLE 794 >UniRef50_Q2RKS1 Helicase-like n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKS1_MOOTA Length = 972 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 195/918 (21%), Positives = 325/918 (35%), Gaps = 110/918 (11%) Query: 82 TYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFR 141 Y+ + + L L P ++ AG RF LR+ + +E Sbjct: 30 VYVHVFFEKTRERLTLP---LADLSPLHDPLAKMEAGSFSTASRFQLRWLVEQILAENSG 86 Query: 142 MPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAE 201 G + +PHQL V + PRVL+ADEVGLGKTIEA +I + G + Sbjct: 87 EGLLAAGGFKIIPLPHQLLAVSFVLDQFKPRVLIADEVGLGKTIEAALIYEELKARGMVK 146 Query: 202 RVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH---DAYNPFDTEQLVICSLDF 258 RVL++ P L QW EM +F F ++D + + N + VI SLDF Sbjct: 147 RVLVVAPSGLCLQWREEMKTKFGEDFIIYDRSTVHSLKQLHGEMTNVWTLADRVITSLDF 206 Query: 259 AR------------------RSKQRLEHLCEAEWDLLVVDEAHHLVWS-EDAPSREYQAI 299 + ++Q A +D+++ DEAH L + Y+A Sbjct: 207 IKPKKITADLDERAARARRWHNEQVFAAAAAAWFDMVIFDEAHKLTKDMTGEETARYKAG 266 Query: 300 EQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML 359 L + P VLLLTATP Q LRL+DP F + E V + + Sbjct: 267 HALVQAAPIVLLLTATPHQGDQHKFRNLLRLIDPYLFSGEGRITAEDVKKVTVRNNKRAV 326 Query: 360 LA--GNKLSNDELNML----GEMIGEQDIEPLLQAANSDSE--DAQSARQELVSMLMDRH 411 + GN+L + + + + +Q L +A + +Q +M+ Sbjct: 327 VDFHGNRLFKQRVATVCLIHRDEVADQVELDLYRAVTDYVTTFYELARQQNNFTMMFLLL 386 Query: 412 GTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE 471 R++ ++ +K R +L Q E A + L Sbjct: 387 IYQRMVSSSSPAILKSLSARLAALEELRRRAADQEPESEREEPDWDDLQELTAEEQLAEL 446 Query: 472 RIYQEFE------------------------GDNATWWNFDPRVEWLMGYLTSHRSQ--- 504 + AT D + L+ + R Q Sbjct: 447 TRASAAPRAGIVIVPAALAAEIAALKKCLALAERATAGRNDIKFTRLLEIINELRIQENN 506 Query: 505 ---KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLL 561 K ++ T LE+ L G R A+ + MS ER F E A L+ Sbjct: 507 PRLKFIIFTEFRETQAYLEERLTS-LGYRTALINGAMSTTERIAQVERFRRE---ADFLI 562 Query: 562 CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVL 621 ++ G EG N QF ++ +DLP+NP LEQRIGR+DRIGQ HD+++ L T ++ + Sbjct: 563 STDAGGEGINLQFCHILINYDLPWNPMRLEQRIGRIDRIGQEHDVKVINLQLADTVENRV 622 Query: 622 VRWYHEGLDAFEHTCPTGRTIYDSVYNDLINY-----------LASPDQTEGFDDLIKNC 670 LD G + L + L + D L Sbjct: 623 REVIENKLDTIRREFCAGEDKLADILGVLQDEFDFEKVYIEALLKQGRKAANLDALSWQI 682 Query: 671 REQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQ 730 E+ + + +RL SN + LA + + + + G + Sbjct: 683 FERAREIVEE-----ERLALPISNLAPE-YVLASQRDLEKRAKRVQRLVEQYLQVYGASL 736 Query: 731 DDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDL 790 + L + P + F ++ ALA E A+ ++++HP + L Sbjct: 737 -----HPYKLREGVYYFQD--PRSGRRLHNVIFQQKYALANEGAELLSFQHPYMVELLAH 789 Query: 791 ILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGN 850 + ++ LL + G IY +L L +L PT ++ Sbjct: 790 LEDALREDTSAKLLVRERKFSGEKGFLFIY--------RLTLTNYLDPTVYYLV----PC 837 Query: 851 NLAAQVEFETFNRQLNAVNRHTGSKLV------NAVQQDVHAILQLGEAQIEKSARALID 904 ++ + N +++ R +L+ + ++ QL +++ A L Sbjct: 838 FVSFAGDTGRVNGRISRYFRDW-EQLICTDLVTGEIPYNLKEAWQLARKAVQQEAEVLFF 896 Query: 905 AARNEADEKLSAELSRLE 922 A+ +++L E + E Sbjct: 897 QAKERLEKRLRDEEEKFE 914 >UniRef50_A5D3Z6 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A5D3Z6_PELTS Length = 1114 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 154/718 (21%), Positives = 286/718 (39%), Gaps = 67/718 (9%) Query: 128 LRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHD-VGRRHAPRVLLADEVGLGKTIE 186 L + + P G+ + +PHQ+ + + + R LLAD+ G GKTI Sbjct: 75 LFLEGTRIRNAFQFDPLYGISVSQIHPLPHQIEAVYHHILKNPNIRFLLADDPGAGKTIM 134 Query: 187 AGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF 246 AG++ + G RVLI+VP L+ QWL EM RF +F + D R N + Sbjct: 135 AGLLFKELKYRGLVSRVLIVVPGHLKDQWLREMKERFGEKFLVVD--RSVMNASWGQNIW 192 Query: 247 DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLV----WSEDAPSREYQAIEQL 302 +I SLDFA++ + + L ++ WDL++VDEAH + + + + YQ E + Sbjct: 193 TENHQIITSLDFAKQ-EDIMFALKDSSWDLVIVDEAHKMSAYRYGDKISKTARYQFGELI 251 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN------YRPVADAV 356 ++ +L LTATP + E+ L LL P F + KN R + + + Sbjct: 252 SQITKYLLFLTATPHRGDPENFRLFLDLLQPGFFANTEMLALSIKNKDNPLFLRRLKEDL 311 Query: 357 AMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQEL-------VSMLMD 409 L ++ + + + ++E ++ A Q+ +++L Sbjct: 312 RDFDNVPLLPPRQVETVKYKLSKAEMELYNAVTTYVEQNFNKALQKEKRNVAFALTILQR 371 Query: 410 RHGTSRVLFR----NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRAR 465 R +S R R+ ++ K+ L Y ++ S + ++ Sbjct: 372 RLASSVRAARKSLERRRDRLQELYKKGQLLQDLGYTEDYLEDLEESIRWQKEEELLEKLT 431 Query: 466 DMLYPERIYQEFEGDNA--------TWWNFDPRVEWLMGYLTSHR----SQKVLVICAKA 513 E + +E E +A + ++ L + R K+L+ Sbjct: 432 SAETLEELREEIEKLDALVLLAKEVEKQEIETKLNRLREVIEEERLRETGTKLLIFTESK 491 Query: 514 ATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ 573 T L + + ++ G H GM + R RA F AQV++ +E EG N Q Sbjct: 492 DTLEYLAEKIGKKWGYSVTTVHGGMGMDARIRAEHEFKNR---AQVMVATEAAGEGINLQ 548 Query: 574 FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFE 633 F MV +D+P+NP+ LEQR+GR+ R GQ ++ I+ T + ++ E L+ Sbjct: 549 FCWLMVNYDIPWNPNRLEQRMGRIHRYGQKSEVHIYNLVAADTREGRILEKLFEKLNRMR 608 Query: 634 HTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDR------ 687 + D V++ + + L + + I R E + A++E+ D Sbjct: 609 EHLGS-----DRVFDVIGDVLPGISLKDLILEAIAG-RRTMEEILAEIERVPDEEAIRRA 662 Query: 688 ----LLEIHSNGGEKAQALAESIEEQDD---DTNLIAFAMNLFDIIGINQDDRGDNMIVL 740 + + + + ++ + E +++ + F + + + + R D + Sbjct: 663 KEATMEALATRHFDLSRIIGEQRIARENRLVPEYVEKFFLRAAQKLEVKCEKRQDGFWRV 722 Query: 741 T--PSDHMLVPDFPGLSE-----DGITITFDREVALAREDAQFITWEHPLIRNGLDLI 791 P + + + + + FD+E A A+F+T HPL+ L+ + Sbjct: 723 NSVPFEVRNQSYEFKIKYGEVHREYLKVAFDKEAAF-NAQAEFVTMGHPLMEAVLETV 779 >UniRef50_B0TFG6 Helicase (Snf2 family) protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TFG6_HELMI Length = 537 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 133/536 (24%), Positives = 220/536 (41%), Gaps = 51/536 (9%) Query: 145 SGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVL 204 + L +PHQ++ A R +LADEVGLGKTIEAG+ L + L G + L Sbjct: 37 TCLSQLAFEPLPHQIDAAWRALYPMGGRAILADEVGLGKTIEAGIFLKELQLRGQLNKTL 96 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQ 264 I+ P+ L QW EM +F + + + V+ S+D A+RS Sbjct: 97 ILTPKNLTGQWASEMRNKFGFPCWV----------NKREYGWHWHPFVVASIDLAKRSPH 146 Query: 265 RLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESH 324 + + + +D +++DEAH L ++ S YQ + + +LLLTATP Q ++ Sbjct: 147 -ADIIRQIPYDAVIIDEAHRL---KNPRSSNYQFARTI--NSKNLLLLTATPVQNDLKEL 200 Query: 325 FARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEP 384 F + LL P F +FA F + L G + D + ++ + Sbjct: 201 FHLVDLLRPGYFGNFADFQ-------------SAFLRGKREPKDPREL------QEILSG 241 Query: 385 LLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQY 444 +L + ++ + ++ + + +D R L+ ++G +R K L Sbjct: 242 VLIRHHRETCAVKLPKRHVHLLPIDLTEPERELYNAVIQYLRGEFRRRKKNRKSTLSLLI 301 Query: 445 QTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ 504 S A + E + L P A + + + +L +R + Sbjct: 302 LLREICSSSFAALGTIEQMGLEELVP----------LARRIRQNAKGHVVTEFLKQNR-E 350 Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSE 564 KV++ T L L + GI V+H G+ R F + D VL+ +E Sbjct: 351 KVVIFTEYFQTMDYLSLHL-QAAGIPVLVYHGGLGRWTRAMTQHQFQKSD--VPVLISTE 407 Query: 565 IGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW 624 G EG N QF S ++ +DLP+NP +EQRIGR+ R+GQ+ D+ ++ T + ++R Sbjct: 408 SGGEGINLQFCSQVINYDLPWNPMRVEQRIGRVHRLGQSRDVHVYNLSTRGTIEEQMLRL 467 Query: 625 YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQ 680 E ++ F T I + L D + REQ E A Sbjct: 468 LSEKIEMFAQTIGPIERIL--YSQKVEGNLEKQALEYLLDLQEEISREQKETAPAA 521 >UniRef50_C5A7B3 Type III restriction endonuclease, res subunit n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A7B3_THEGJ Length = 1100 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 161/780 (20%), Positives = 303/780 (38%), Gaps = 68/780 (8%) Query: 67 WQMQVEEVKEENGLLTYIGTRLDTEESGV-ALREVFLDSKLVFSKPQDRLFAGQIDRMDR 125 VE V E + G L++ ++ + L + L+ + + P D + Sbjct: 21 EPFLVEIVNESGDTIMVGGHYLNSRKADLYILTKADLEEIEIITNPLDF-----KGDPEA 75 Query: 126 FALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAH-DVGRRHAPRVLLADEVGLGKT 184 AL +Y P + + + +P Q++ + + R R LLAD+ G GKT Sbjct: 76 AALAIEGERYHFASLYDPILAVSVSKIAPLPFQIDAVYNHILRNPEIRFLLADDPGAGKT 135 Query: 185 IEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYN 244 I AG+++ + L G AER+LI+VP L QW EM +F F + + E + Sbjct: 136 IMAGLVIKELKLRGLAERILIVVPGHLVPQWKREMKEKFQEEFTIVN----REIFRTTTD 191 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLV----WSEDAPSREYQAIE 300 + E+ VI S+DF ++ + L+ L +WDL++VDEAH + + ++ Y+ E Sbjct: 192 VWRREKQVIASIDFLKQ-EDILKSLENVDWDLVIVDEAHKMAAYRFGKKIYRTKRYKVGE 250 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN------YRPVAD 354 L+ + +L LTATP + E+ L LL P F D +E + R + + Sbjct: 251 VLSRNSTHMLFLTATPHKGDPENFRLLLDLLVPGLFSDKEILLEAIRRNENPIFLRRMKE 310 Query: 355 AVAMLLAGNKLSNDELNMLGEMIGEQDIE---PLLQAANSDSEDAQSARQELV---SMLM 408 + + + + +++I+ L + + + +R+ +V +L Sbjct: 311 DLVDFEGKKIFKPRYSHTVNFNLTDKEIKLYNELSRYIHYQYTVLEGSRRSIVFPLVILQ 370 Query: 409 DRHGTSRVLF----RNTRNGVKGFPKRELHTIK--------------LPLPTQYQTAIKV 450 R +S R + +K + + K +++ +++ Sbjct: 371 RRFASSTYALLQSLRRRKARLKEYLESGKLETKGVQLDFEDLLELEDEEERERWKAELRL 430 Query: 451 SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQK--VLV 508 G+ RK A E I E + ++ + ++ +K +L+ Sbjct: 431 EGLPIVRKRKLIEAEIRTLDELIRMSEELIASEEETKLKKLRETLDFIAREHGEKEKILI 490 Query: 509 ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSE 568 T L L+E G H M + R + F E AQV++ +E E Sbjct: 491 FTEFKDTLEYLVNKLQE-WGYTVTFIHGEMDMETRLQREKDFRE---WAQVMVATEAAGE 546 Query: 569 GRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEG 628 G N QF ++ +D+P+NP+ LEQRIGR+ R GQ + + I T + +++ Sbjct: 547 GINLQFCHLLINYDIPWNPNRLEQRIGRVHRYGQRYPVHIFNFVARNTREGMVLERLLHK 606 Query: 629 LDAFEHTCPTGRTIYDSVYNDLIN---YLASPDQTEGFDDLIKNCRE-----QHEALKAQ 680 ++ G ++D + L Y + D +E Q E + + Sbjct: 607 IEEIRKAL--GDKVFDVIGELLDGENLYTLLAEVAVMLRDPDSVLKEEEPKFQPEEITKK 664 Query: 681 LEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTN-LIAFAMNLFDIIGINQDDRGDNMIV 739 E+ L + L E EE L F + + ++ ++ Sbjct: 665 AEELLGESLATKHIDLSRIMRLLEKAEENRLSPEYLELFFLKAMKRLNARIREKEPHVYS 724 Query: 740 LTPSDHMLVP-----DFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSG 794 + + +L + + ITFD+ ++ R+D +F+++ HPL + + Sbjct: 725 IERTPRVLREIAERKGYGTVERSYRAITFDKAISEERDDVEFVSFGHPLFEALREWVQEE 784 >UniRef50_B0K8X0 Helicase domain protein n=6 Tax=Clostridia RepID=B0K8X0_THEP3 Length = 894 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 165/696 (23%), Positives = 287/696 (41%), Gaps = 69/696 (9%) Query: 55 FNPGDTITSHDGWQ-MQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQD 113 F GD + D + M++ +V E G ++Y + + + L S + Sbjct: 2 FKVGDWVFDIDKKRAMKIIDVFELWGYVSYSIYDPIEKV-TYTVSDKRLVSTEKKND--- 57 Query: 114 RLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV 173 D ++ F A + S+E + S + G +PHQ+ + + R Sbjct: 58 ------FD-LNYFKYVIIASRISNELAQGFLSSIGGS-IIPLPHQMYALNRALSKSTVRY 109 Query: 174 LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF--D 231 LLADEVGLGKTIEAG+I+ + G +R+LII P+ L QW E+ +FN F + Sbjct: 110 LLADEVGLGKTIEAGLIIKELKARGLVKRILIISPKGLITQWHDELELKFNEDFKIILPQ 169 Query: 232 DERYAEAQHDAYNPFDTEQLVICSLDFARR---------------SKQRLEHLCEAEWDL 276 D + + N +D VI SLD + +K+R+E+L A WD+ Sbjct: 170 DFEVLKRIYGEGNIWDKFPQVITSLDSVKPVEKRQGWTKERIKEFNKERMENLVMAGWDI 229 Query: 277 LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 +VVDEAH L S + ++ +L++ P +LLLTATP Q +S +RL+D F Sbjct: 230 IVVDEAHRLAGSSSDVA-RHKLGIELSKASPYLLLLTATPHQGKTDSFLRLMRLIDKEAF 288 Query: 337 HDFAQFVEEQKN--YRPVADAVAMLLAGNKLSNDELNMLGEMIGE----------QDIEP 384 + V EQ A+ GN L + + E + + Sbjct: 289 PNEKAIVREQVAPYIIRTEKREAVDRDGNPLFKKRITKTVNISWEIKHSLQRELYEKVTK 348 Query: 385 LLQAANSDSEDAQSARQELVSMLMDRHGTSRV--LFRNTRNGVKGFPKRELHTIKLPLPT 442 + + ++ + + +LM R TS + N N ++ + + Sbjct: 349 YVAEGYNRAKKEKRYYIGFLMVLMQRLVTSSTHAIKVNLENRLEFLKNEVVGVESIEEDM 408 Query: 443 QYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS-- 500 ++ + + + D +++ E + + + + + D + E L+ ++ Sbjct: 409 FFEYDAQKVLDELLKIKSLDIKKEIDELEELLRLAKQAESQY--IDAKAEVLIDFIDQLS 466 Query: 501 ---HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGA 557 SQK +V AT L+ L E +G + A+ + MS+ ERD + F Sbjct: 467 MEYKNSQKFIVFTEFLATQQYLKDFL-ESKGYKVAILNGSMSMEERDASLKEFKNYKD-- 523 Query: 558 QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTA 617 VL+ ++ G EG N QF + ++ +DLP+NP +EQRIGR+DRIGQ D+ + L+ T Sbjct: 524 -VLISTDAGGEGLNLQFCNIVINYDLPWNPMKIEQRIGRVDRIGQERDVLVLNFMLKDTV 582 Query: 618 QSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEAL 677 + + E L + + + L S F +L E E + Sbjct: 583 EFRVREVLEEKLRVIYEQFGV---------DKMGDILDSVQSEMDFTELYMRSIEMPEDI 633 Query: 678 KAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDT 713 + + D++ E E+ + + E+ + Sbjct: 634 EYNVSIMEDKIKE----KAEQINRIKGLLREEKELD 665 >UniRef50_A4IQV6 Helicase, Snf2/Rad54 family n=11 Tax=Bacillaceae RepID=A4IQV6_GEOTN Length = 554 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 136/563 (24%), Positives = 253/563 (44%), Gaps = 65/563 (11%) Query: 126 FALRYRARKYSSEQFRMPYSGLRGQR----TSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 + + A + + ++GL+ + +++PHQL +A V + +LADEVGL Sbjct: 28 WEMYELALEAAHHLSVPEFNGLQAPKHLPHLTILPHQLEVARRVVEEMNGKAILADEVGL 87 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEAG++L + ++ G ++ LI+VP +L QW+ E+ +F + Q Sbjct: 88 GKTIEAGLVLKEYMIRGLVKKALILVPASLVSQWVKELNEKFFIPAV----------QQK 137 Query: 242 AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 ++ +V+ S+D A++ R + + E +D++++DEAH L ++ ++ Y+ ++ Sbjct: 138 KSYVWEQCDIVVSSIDTAKKPPHR-DIIYEQPYDMIIIDEAHKL---KNNKTKNYEFVQN 193 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPV--ADAVAML 359 L + LLLTATP Q +E F + LL P + QF + R V D + L Sbjct: 194 LKKKF--CLLLTATPIQNRIEEIFNLVSLLKPGHLGNAEQFAKTYGKTRAVQTNDHLKAL 251 Query: 360 LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 + + N + E ++ +EP+L + + A + L + L R Sbjct: 252 VNKVMIRNRRADTPIE-WSKRHVEPVLIEFTDEERELYEAVKALRHESFAGSFSLITLLR 310 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 ++ + + ++ + A PE + E Sbjct: 311 EA------------------CSSREALFLTIKNMIDKCEGA--------VPEALEHVLEK 344 Query: 480 DNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMS 539 NA + + E + + S + KV++ AT L L+ L++ GI + F G Sbjct: 345 INA--VTTNSKAEKALELIRSI-NDKVIIFTEYRATQLYLQWFLKQH-GISSVPFRGGFR 400 Query: 540 IIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDR 599 ++D F AQV + +E G EG N QF +++ +DLP+NP LEQRIGR+ R Sbjct: 401 RGKKDWMQELFK---NHAQVFIATEAGGEGINLQFCRYVINYDLPWNPMRLEQRIGRVHR 457 Query: 600 IGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQ 659 +GQ D+ I+ +++T + ++ +E + FE +D++ + + Sbjct: 458 LGQTDDVHIYNFAVKQTVEEHILTLLYEKIRLFERVVGE--------LDDILAKMNLANL 509 Query: 660 TEGFDDLIKNCREQHEALKAQLE 682 F+D + + R + E +K ++E Sbjct: 510 EHYFEDALVHSRSEGE-MKIKME 531 >UniRef50_P54509 Uncharacterized ATP-dependent helicase yqhH n=93 Tax=Bacillales RepID=YQHH_BACSU Length = 557 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 140/588 (23%), Positives = 250/588 (42%), Gaps = 69/588 (11%) Query: 112 QDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRT----SLIPHQLNIAHDVGR 167 +RL + L + + + GLR + +PHQL +A V Sbjct: 16 AERLKNDGPWAN--WELYKLSAEIQKTLAIPEFEGLRAPLYLPSFTPLPHQLEVAQKVVE 73 Query: 168 RHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRF 227 + + +LADEVGLGKT+EAG+IL + ++ G A+++LI+VP +L QW+ E+ +F + Sbjct: 74 KMNGKAILADEVGLGKTVEAGLILKEYMIRGLAKKILILVPASLVSQWVKELQEKFLIPA 133 Query: 228 ALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 + ++ +V+ S+D A+RS R E + +DL+++DEAH L Sbjct: 134 V----------EQKKSYVWEQCDIVVSSIDTAKRSPHR-EIVLSIPYDLVIIDEAHKL-- 180 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ- 346 +++ ++ Y+ + L + LLLTATP Q +E F + LL P F EE Sbjct: 181 -KNSKTKNYEFVRNLVK--KYCLLLTATPIQNRIEEIFNLVSLLKPGHLGSQNHFQEEFA 237 Query: 347 ------KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSAR 400 + + + D V ++ N+ + LN ++ ++ A Sbjct: 238 KKKSSLEAHEHLKDLVNKVMIRNRRHDTGLNWKQR---------HVETVPIQFSPSEQAL 288 Query: 401 QELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSA 460 + +S L D +F Y T K+ + A Sbjct: 289 YDEISRLKDSINKPASMF---------SIMTLQRECCSSREAVYMTLKKMLDQKEKQAPA 339 Query: 461 EDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLE 520 D + +RI Q + + ++ + KV++ AT + L+ Sbjct: 340 IDEDTISVLIDRINQ---------VTQNSKALQVVDLIKKI-DDKVIIFTEYRATQIYLQ 389 Query: 521 QVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVM 580 L ++ GI + F G ++D F QVL+ +E G EG N QF +HM+ Sbjct: 390 WFL-QQNGISSVPFRGGFKRGKKDWMKDLFR---GKIQVLIATEAGGEGINLQFCNHMIN 445 Query: 581 FDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGR 640 +DLP+NP LEQRIGR+ R+GQ D+ I+ + T + +++ +E + FE Sbjct: 446 YDLPWNPMRLEQRIGRIHRLGQERDVHIYNMATKHTVEEHILKLLYEKIHLFEKVVGELD 505 Query: 641 TI--------YDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQ 680 I ++ +D++ + A+ ++ + D + + + L A+ Sbjct: 506 DILTKIQVNNFEEHLHDILYHSATEEEMKIKMDNLTSFLSYKKQLPAE 553 >UniRef50_C0GU74 Helicase domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GU74_9DELT Length = 955 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 171/922 (18%), Positives = 331/922 (35%), Gaps = 75/922 (8%) Query: 44 ARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLD 103 A + +P +RV+ + + + + + E+ L Sbjct: 6 ASTLAPGSRVLVRDAEWLVRRVDR----ASTGGQALTCVGLSELVRDREATFLTDLEALH 61 Query: 104 SKLVFSKPQD-RLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIA 162 S + P RL A ++ L + + +P+QL+ A Sbjct: 62 SPVKSLDPARTRLVADSSNQYQDSLLYLESLLRQTPPTDSRLYTGHQAAMDFVPYQLDPA 121 Query: 163 HDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRR 222 + R+L+AD VGLGKT+EAG++L + + G +R+L++ +++ Q+ E+ R Sbjct: 122 LQALEKPRQRILIADSVGLGKTLEAGVLLSELIRRGRGKRILVVTMKSMLTQFQKELWTR 181 Query: 223 FNLRFALFDD---ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVV 279 F + D +R +NPF I S+D ++ + HL +A WD++V+ Sbjct: 182 FTIPLTRLDSIGLQRVRSRIPTNHNPFYYFDKSIISMDTLKQDNEFRVHLEKATWDVIVI 241 Query: 280 DEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDF 339 DEAH++ ++ + L+ +++L+ATP S + + +LDP + Sbjct: 242 DEAHNVAERGHGRTQRARLARLLSRQSDSLIMLSATPHDGRARSFASLMNMLDPTAIAN- 300 Query: 340 AQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSA 399 Q +Y P D + L + D + + E+ I A E A + Sbjct: 301 ------QDDYGP--DDIKGLFI-RRFKKDIQHQVKGSFQERRISTCHIPATEQEERAFAG 351 Query: 400 RQELVSMLMDRHGTSRVLFRNT-RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARK 458 L ++ T LF+ T + P L TI L Q Q + + + Sbjct: 352 LAGLNLHSLNNKRTGGQLFQTTLEKALFSSPAACLETIDARLR-QLQREPQADYVGDVQS 410 Query: 459 SAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQ 518 E R+ + F+ + + W ++++ + AT Sbjct: 411 LKELRSAVAEITSESFSRFQKLVDLLSSPSSELHW----TGKDPLDRLVIFTERIATLEF 466 Query: 519 LEQVLREREGIR---AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQF- 574 L + L G++ H G+S IE+ R F +++ ++L+ S++ SEG N + Sbjct: 467 LYRHLPPALGLKDRHVERLHGGLSDIEQQRVVEDFGRDESPLRLLIASDVASEGINLHYL 526 Query: 575 ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTA-----QSVLVRWYHEGL 629 ++ FD+P++ + +QR GR+DR GQ I ++ ++ Sbjct: 527 CHRLIHFDIPWSLMVFQQRNGRIDRYGQERTPLISYLAIQSREPKIHGDMRILELLISKD 586 Query: 630 DAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGF--DDLIKNCREQHE----ALKAQLEQ 683 + + + + +G DD + L A LE+ Sbjct: 587 EEAIKNIGDPSALMGVYDVEAEEARTAGALEQGLSPDDFAARDLSAPQDGPLDLLAFLEE 646 Query: 684 GRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLT-- 741 G+++ S+ Q L + DD + +N D D +++ VL Sbjct: 647 GQEK-----SSDTSARQRLGQMPALFADDFEYVRLGLNRLDQDNDLSPDIDESLRVLDMN 701 Query: 742 -PSDHMLVPDFPGLSED------GITITFD-----------REVALAREDAQFITWEHPL 783 P D L+ F L + + T D R+ A + ++ HP+ Sbjct: 702 VPGD--LLHRFAFLPREIQPRNGRLKFTDDKDTMQEEIRRCRKDEQAWPELHYLWPLHPV 759 Query: 784 IRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRM 843 ++ D + + G + +L +L E+IY++ P + P Sbjct: 760 LQWLNDRVQTS-FGRNEAPVLTLPSLKPE----EIIYILTGIIPNRKGQ----PLIQNWF 810 Query: 844 LLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALI 903 + +G E + + + V + +L + K + Sbjct: 811 GVTVSGRAFKGMEPLEKILERTGLGSSTFSNPGNMKVSRQAEEMLPDVVQKAMKWMNEVR 870 Query: 904 DAARNEADEKLSAELSRLEALR 925 N + +L+A L +LE L+ Sbjct: 871 REFENRVNPQLNAHLEKLEQLK 892 >UniRef50_A7HSB4 Helicase domain protein n=6 Tax=Bacteria RepID=A7HSB4_PARL1 Length = 941 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 192/885 (21%), Positives = 322/885 (36%), Gaps = 103/885 (11%) Query: 132 ARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMIL 191 A K +PHQL + + R LLADEVGLGKTIEAG++L Sbjct: 72 AAKLQDALEDNLLLAPIQSSVIPLPHQLYALNRAVGQDRIRYLLADEVGLGKTIEAGLVL 131 Query: 192 HQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA-----YNPF 246 + L G +R+L++ P+ L QW EM + F D A + N + Sbjct: 132 RELKLRGRVKRILVVAPKGLVRQWQAEMRQHFGEPLHFVDPSSLAALRQWRGDSAEDNAW 191 Query: 247 DTEQLVICSLDFARR---------------SKQRLEHLCEAEWDLLVVDEAHHLVWSEDA 291 VIC+LD + +++R E L A WDL+++DEAH + S + Sbjct: 192 RMHDQVICALDSVKPLESRRGWSLDQIQTYNRERFEDLVSAAWDLVIIDEAHRMGGSTEQ 251 Query: 292 PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY-- 349 + Y+ LAE P +LLL+ATP Q + ++LLD + F D E+ Sbjct: 252 VA-RYKLGAALAEASPYLLLLSATPHQGKTDQFMRLMQLLDRDAFPDEGSVSHERVQPFV 310 Query: 350 RPVADAVAMLLAGNKLSNDELNMLGEMIGEQD----------IEPLLQAANSDSEDAQSA 399 A+ G L L L + + + ++ + + A+ Sbjct: 311 IRTEKRAAINAEGQPLFRPRLTRLHAVAWQARHAAQQQLYEAVTDYVRHGYNQALAAKQR 370 Query: 400 RQELVSMLMDRHGTSRV-LFRNT---RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMG 455 + +LM R TS R T R V P+ + P ++ + G Sbjct: 371 HVGFLMILMQRLVTSSTAAIRATLEKRQAVLDTPQTQARLFDTLSPDEWA---DLDGEAQ 427 Query: 456 ARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ------KVLVI 509 + + ++ E + D + E L+ + + + KVLV Sbjct: 428 VDLALQANGLELEKSEVETLLALARSTEAAGTDAKAESLLELIYKLQQEEGDPALKVLVF 487 Query: 510 CAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEG 569 T L L R G A + GM + R R FA A+VL+ ++ G EG Sbjct: 488 TEFVPTQAMLADYLESR-GFTVATLNGGMDMEARTRTLQTFA---GDARVLISTDAGGEG 543 Query: 570 RNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGL 629 N QF +V FD+P+NP +EQRIGR+DRIGQ H ++ LE T + + + E L Sbjct: 544 LNLQFCHVIVNFDMPWNPMRIEQRIGRVDRIGQKHVVRALNFVLEDTVEHRVRQVLEEKL 603 Query: 630 DAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQ----LEQGR 685 + + + S + FD+L + EA++ + + Q R Sbjct: 604 AVIAEEFGV---------DKAADVMDSAEVEPVFDELFVQSLQHPEAIERECDSVVSQLR 654 Query: 686 DRLLE--IHSNGGEKAQAL-AESIEEQDDDTNLIAFAMNLFDIIGIN--QDDRGDNMIVL 740 L E +S+ L A+ + D + + + + + ++ + Sbjct: 655 TTLAESNRNSDLLAVPHDLDADQARKWRDHPAQFWLERAVVNGLAVRGGSATQDGSLWHV 714 Query: 741 TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSST 800 +D P FD A A+++T E P R + + G Sbjct: 715 RWADGAETPQ----------ACFDARAAGENPAAEWLTMEDPRARAIIGDVPRFVAGQ-P 763 Query: 801 ISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNL--AAQVEF 858 + +++ LP + ++ + AP RFLP + ++ G A+ + Sbjct: 764 LPVIRVTGLPDSVNGIWSLWEIGLAAPGA-NRKRFLP-----VFINDEGRPFVPTAKRVW 817 Query: 859 ETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAEL 918 + + + V + V + A AL A +E ++ E Sbjct: 818 DLL------LTETVSVQSVADAEASV-GWFKASFAVAGAQGEALFAALADEHRARIKEER 870 Query: 919 SRLEALRAVN---------PNIRDDELTAIESNRQQVMESLDQAG 954 R V P +R ++S + + +LD Sbjct: 871 DRATYAFDVRNQAIGRIGLPAVRQFRRRRLQSEHEARLAALDDMQ 915 >UniRef50_B0TB39 Snf2 family helicase, putative n=2 Tax=Clostridiales RepID=B0TB39_HELMI Length = 581 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 157/594 (26%), Positives = 269/594 (45%), Gaps = 58/594 (9%) Query: 113 DRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIP--HQLNIAHDVGRRHA 170 +++ G +D LR +A ++S L R + P +Q+ V Sbjct: 15 EKIINGHGASVDDLYLRRQALQFSLHPGFDTLLSLTAVR-DMTPFDYQIRTVRHVLANLR 73 Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 R LL DEVG+GKT+EAG+I + +L G A RVLI+ P +L QW EM +FNL F + Sbjct: 74 GRALLCDEVGMGKTVEAGLIALEYMLRGLARRVLILAPPSLVSQWREEMQVKFNLDFITY 133 Query: 231 DDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 DD A + P+ +I S+D A+R RL+ + A +DL++ DEAHHL ++ Sbjct: 134 DD----PAFKAHHEPWTFFPRIIASIDTAKRESHRLQ-IGAAAFDLVICDEAHHL---KN 185 Query: 291 APSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR 350 ++ YQ + QL + +LLLTATP + +E F + LL P + A F ++ Sbjct: 186 RRTQAYQLVSQLQK--KYILLLTATPVENDLEELFNLITLLLPGQLETAAAFKKKY---- 239 Query: 351 PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDR 410 + G+ L L ++ E ++ +R+ ++ + Sbjct: 240 --------ITRGDALKPKNTEELKALVRE-----VMVRNRRSETGVILSRRYAETIRLQL 286 Query: 411 HGTSRVLFRNTRNGVKGF-------PKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDR 463 +R + V+GF P+ + L + + + + ++ ++ Sbjct: 287 SPEEMAFYRRLTHFVRGFFIDGQDKPQGGASLLTLKVLQR-EIGSSIEAVLPTLTKMAEQ 345 Query: 464 ARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVL 523 R++ + A + + L+ L + KV+V + T L + L Sbjct: 346 PSYAPEMRRLFAAL-LEQAKKVPHRAKADALVQLLRGL-NDKVIVFTGFSETHRYLVRRL 403 Query: 524 REREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDL 583 E G A H GM +E++ +FA+ AQVLL +E GSEGRN QF +V +DL Sbjct: 404 TE-AGFAVAQLHGGMKRLEKEEQVRYFAD---VAQVLLSTETGSEGRNLQFCRCLVNYDL 459 Query: 584 PFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIY 643 P+NP +EQRIGR+ RIGQ D+ I+ + T ++ ++ ++ F+ Sbjct: 460 PWNPMQIEQRIGRIHRIGQERDVYIYNLSAQDTLEAHMLELLDAKINMFQLVVG------ 513 Query: 644 DSVYNDLINYLASPDQTEGFDDLIKNCREQH---EALKAQLEQGRDRLLEIHSN 694 +L L + + +GF+D++ N Q ++AQ+++ D+LLE ++ Sbjct: 514 -----ELDMILGNLKENQGFEDMVLNAWLQSADEREMEAQMDKVGDQLLEAKNH 562 >UniRef50_A9B2A6 Helicase domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B2A6_HERA2 Length = 669 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 152/600 (25%), Positives = 243/600 (40%), Gaps = 46/600 (7%) Query: 105 KLVFSKPQD----RLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN 160 +L F P D RL +G + DR+A+R +A Y+ + L +QL Sbjct: 90 ELRFRPPTDGERARLLSGHVTPADRWAVREQAEHYTLKGGFDHLLSLEYAAIDAKEYQLR 149 Query: 161 IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEML 220 V +LADEVGLGKTIEAG+I+ + L LI+ P L QWL EM Sbjct: 150 AVRRVLGEMHGNAILADEVGLGKTIEAGLIIKEYHLREMIRTCLILTPAPLSEQWLEEMH 209 Query: 221 RRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVD 280 +F + F D+ LV+ S+D A+ + L + WD+LV+D Sbjct: 210 DKFGMNFHRLGDDSDI----------AQYPLVVGSIDRAK--GAYRKALTDRTWDMLVID 257 Query: 281 EAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFA 340 E H L ++ + Y+ + L LLL+ATP Q + + + + P Sbjct: 258 ECHML---KNHRTGRYKFVFNLNR--KHCLLLSATPVQNELRELYNLITVARPGHLKGPR 312 Query: 341 Q----FVEEQKNYRPVADAVAML---LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS 393 Q F+E++++ R V A+L + N+ SN + +I +IE D Sbjct: 313 QFQKLFMEDRRHARNVEHLRALLNEVMIRNRRSNTLTELPPRLIHHHEIE-----LTDDE 367 Query: 394 EDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAI--KVS 451 D A + R+ ++ ++ V + L T A+ + Sbjct: 368 HDFHDAMVRFCKHIYQRYVEGDIVLQSIDGKVVVSKLVLVLMTLLKEMTSSPRAVGHTLR 427 Query: 452 GIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICA 511 G M AR D A + + E + L+ + + S K++V Sbjct: 428 GAMSARLGKMDAADNGELERLLKIVDEMQIP------SKARTLLKIIKNDDS-KIIVYTE 480 Query: 512 KAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRN 571 AT L L + G+ + +FH G+S +++ A F D AQV L +E G +G N Sbjct: 481 FVATLEFLRDFLVDH-GVESVLFHGGLSGMQKRNAVERFR--DGKAQVFLSTESGGQGLN 537 Query: 572 FQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDA 631 QF +V +DLP+NP +EQRIGR+ R GQ ++I+ L T + ++ +D Sbjct: 538 LQFCHRLVNYDLPWNPMRIEQRIGRVHRYGQERPVEIYTLILRGTIEEYILHVLTGKIDM 597 Query: 632 FEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEI 691 F+ + S ++ + R Q E L +L + D L E Sbjct: 598 FQTVIGEIDAML-SFMHEQQSLEVRITDIILHSKSFDEIRAQMEQLGEELRKANDTLNEA 656 >UniRef50_A7HHH1 Helicase domain protein n=6 Tax=Bacteria RepID=A7HHH1_ANADF Length = 1145 Score = 365 bits (936), Expect = 6e-99, Method: Composition-based stats. Identities = 200/953 (20%), Positives = 320/953 (33%), Gaps = 134/953 (14%) Query: 109 SKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHD-VGR 167 + P+ F G F L A + PY L R +PHQL +D + Sbjct: 60 ASPEAEPFDGN---PLHFKLGVEAARLGLAYEYDPYFSLSIARVDPLPHQLEAVYDYFLK 116 Query: 168 RHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRF 227 R LLAD+ G GKTI AG++L + + G R LI+ P L QW E+ +F +F Sbjct: 117 LPRIRFLLADDPGAGKTIMAGLLLKELKIRGLVTRTLIVAPANLTFQWQRELKDKFREQF 176 Query: 228 ALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHL-V 286 + E NP+ V+ S+ + R + E L + WDL++VDEAH + Sbjct: 177 DVMRGEVLRTQY--GQNPWQERNQVVTSVSWISRVEDAKESLLRSSWDLVIVDEAHKMSA 234 Query: 287 WSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ 346 +S D + +Q E L++ LL+TATP + E+ L LLD + + D E Sbjct: 235 YSSDKKTLAFQIGEALSQRTDHFLLMTATPHKGDPENFRLFLSLLDRDVYGDVKSLEEAM 294 Query: 347 KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVS- 405 + + + A + E + ++ +D+ + D D A V Sbjct: 295 RRHAAPFYLRRLKEALVSFPDPETGEVKKLFPNRDVRTTKFELDGDEFDFYDALTRYVED 354 Query: 406 ---------------------MLMDRHGTSRVLFRNT-------RNGVKGFPKRELHTI- 436 ML R +S R + R + P+R + Sbjct: 355 QSIKASAAENVQANILSFQMAMLQRRFASSIYAVRRSLERMRDKRRKILQDPERYRQELI 414 Query: 437 -------KLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDP 489 LP Q I + +D + E + Sbjct: 415 DRRLPEDFDELPEDEQAKIISNAEETVLAVDPIALKDEIQRLEKLVELARALEK-REIES 473 Query: 490 RVEWLMGYLTSH-----RSQKVLVICAKAATALQLE---------QVLREREGIRAAVFH 535 ++ L L + K+LV T L LRE G+ H Sbjct: 474 KLNKLRQVLNEQQIFSDKRMKLLVFTEHKDTLDYLAGDGYDGRPLGKLRE-WGLSVTQIH 532 Query: 536 EGMSIIERDR------AAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDL 589 GM I +RD A F E+ QVL+ +E EG N QF M+ +D+P+NP Sbjct: 533 GGMQIGDRDTPGTRIYAEREFRED---CQVLVATEAAGEGINLQFCWLMINYDIPWNPVR 589 Query: 590 LEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYND 649 LEQR+GR+ R GQ D I T + ++ L + T ++D V Sbjct: 590 LEQRMGRIHRYGQQKDCLIFNFAAVNTREGRVLEKLLMRLAEIKDELGT-DKVFDVVGEM 648 Query: 650 LINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRL----LEIHSNGGEKAQALAES 705 L + L E + + +K + R+ LE + AL Sbjct: 649 LPSNLLEKLFREMYAKRLSESTIADRIVKDIDAERFKRITGSTLEGLAKKELNLSALVGK 708 Query: 706 IEEQDDDTNLIAFAMNLFD----IIGINQDDRGDNMIVLTPSDH---------MLVPDFP 752 E + + + F + GI+ N + L P F Sbjct: 709 SVEAKERRLVPEVVEDFFTVAAPVAGIHPTPVRGNDHIYRVGKVPKTLSGIAEQLEPRFG 768 Query: 753 GLSEDGITITFDREVALAREDAQFITWEHPLIR----NGLDLILSGDTGSSTISLLKNKA 808 L + + FD+ + +++T HPL + + + + + L KA Sbjct: 769 KLGREYQRVAFDKRLLGDDATLEWVTPGHPLFEVVRSDVFERVRDDLHRGAVLWDLHAKA 828 Query: 809 LP------------VGTLLVELIYVVEAQAPKQLQLNR---FLPPTPVRMLLDKNGNN-- 851 G+ L + ++VV L L + FL P G Sbjct: 829 PYRVHVYGASIKDGRGSTLHKKLFVVRTDPDGSLTLRQPTLFLDLIP-----SAKGTQAP 883 Query: 852 -LAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEA 910 L+ + L VQQ ++ L ++ R Sbjct: 884 PLSGLPDRAAVESYL--------------VQQALNPFL----KEVGDQRTKENTVVRQHI 925 Query: 911 DEKLSAELSR--LEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALR 961 + L ++R L +N + + + +E N Q LD RL+ R Sbjct: 926 EISLQELINRQQLTLAELLNRRVAGENIPGLEGNIAQAEAHLDDLNGRLERRR 978 >UniRef50_C7HF43 Helicase domain protein n=1 Tax=Clostridium thermocellum DSM 2360 RepID=C7HF43_CLOTM Length = 889 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 157/680 (23%), Positives = 267/680 (39%), Gaps = 83/680 (12%) Query: 55 FNPGD-TITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQD 113 GD ++Q+ E+ E G ++Y T + + P+ Sbjct: 2 LQIGDYVFDKTKNERVQILEISEVWGFVSYKVFNTSTGKVYK-----LSADDICAEIPEK 56 Query: 114 RLFAGQIDRMDRFALRYRARKYS-SEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR 172 + LRY A + +PHQL++ + + R Sbjct: 57 H--------YNESYLRYVALLSKIKNKISQGILSKLSCGIIPLPHQLHVLNRALSNNNVR 108 Query: 173 VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFAL--- 229 +LADEVGLGKTIEAG+I+ + G R+LI+ P L QW +EM +FN +F + Sbjct: 109 YILADEVGLGKTIEAGLIIKELKARGLIRRILIVCPTGLVTQWDMEMKEKFNEKFHVILP 168 Query: 230 --FDDERYAEAQHDAYNPFDTEQLVICSLD---------------FARRSKQRLEHLCEA 272 +D R D Y FD VI +D A+ +++R+ + + Sbjct: 169 ENYDAIRQITGNEDVYGQFDQ---VISPMDSIKPLERRAGWTEEKIAKYNEERIYSIINS 225 Query: 273 EWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLD 332 WDL+ +DEAH + S + Y+ + LA P +LLLTATP E +R++D Sbjct: 226 GWDLIAIDEAHRVAGSSGEVA-RYKLGKLLAAASPYLLLLTATPHNGKTEPFLRLIRMID 284 Query: 333 PNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD 392 F + V+EQ + + ++ G + + I +++ + Sbjct: 285 EKAFPNADAVVKEQVAPYVI----------RTEKREAIDHNGNKLFKNRIIKVIEMHWDE 334 Query: 393 SEDAQSARQELVSMLMDRH-------------------GTSRVLFRNTRNGVKGFPKREL 433 Q E+VS + ++ R++ +T + +R Sbjct: 335 RHSMQRKLYEMVSDYVAKNYNKAMRNRGKNMWFVFLLIMMQRMVTSSTSAVRESMERRVR 394 Query: 434 HTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE-----GDNATWWNFD 488 + Q + + + + E A L E + A + D Sbjct: 395 VLEEQAFKYQSMSEEEFAEMELEENMEEAIAAISLGIEEEITQLNDIIAVAKQAEFQYLD 454 Query: 489 PRVEWLMGYLT----SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERD 544 +VE L + R +K+++ AT L ++L++R G ++ + MSI ER+ Sbjct: 455 VKVEPLFEIIDDLFAEDRQRKIIIFTEFVATQSYLVKLLKDR-GYSTSILNGSMSIEERN 513 Query: 545 RAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 F T +L+ ++ G EG N QF++ ++ +DLP+NP +EQRIGR+DRIGQ Sbjct: 514 AVLHEFK---TQTDILISTDAGGEGLNLQFSNCIINYDLPWNPMKIEQRIGRVDRIGQQR 570 Query: 605 DIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPT--GRTIYDSVYNDLINYLASPDQTEG 662 D+ ++ L T ++ + E L I DS +L A Sbjct: 571 DVVVYNFILADTVENRVKTVLEEKLSVILREIGIDKYSDILDSETAELNFTDAYMQSIRN 630 Query: 663 FDDLIKNCREQHEALKAQLE 682 +D+ N R E LK Q++ Sbjct: 631 PNDIEFNIRRIEEDLKTQVK 650 >UniRef50_UPI0001AF4744 SNF2 family helicase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF4744 Length = 2150 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 178/880 (20%), Positives = 319/880 (36%), Gaps = 108/880 (12%) Query: 112 QDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP 171 +D+L A D ++ LR + + ++ + +PHQ +A R Sbjct: 153 RDQLKAAGFDPLELVELRLQGEELATLDDFEELLAVDVANVDRMPHQEAVARHALSRLRG 212 Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFAL-F 230 R +LADEVGLGKTIEAG+ + + L G A+RVL++ P L+ QW EM +F+L+F + + Sbjct: 213 RAVLADEVGLGKTIEAGLAVKELTLRGLAKRVLVLCPAPLREQWREEMNHKFDLQFDVAY 272 Query: 231 DDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 + +I SL R + E L + WD+++VDE + Sbjct: 273 HGPEVGNQEK-----------LIVSLALGTR---QAEKLTKHPWDIVIVDE--AHRAAGA 316 Query: 291 APSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR 350 + + I L LTATP Q + + + LL P F F Q+ + Sbjct: 317 GARKRRELITALTSACRYAFFLTATPVQNDLLELYRLIELLRPGTFTSVKTF---QREFM 373 Query: 351 PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDR 410 D M+ + ++ +++ + + +EL ++ D Sbjct: 374 RGYDPRTPSDPAALRRLISSAMIRTTRAQAGVDRVVRRPVDVPIELGAPERELYALSTD- 432 Query: 411 HGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP 470 L RN +R ++L T ++ + + A + ++R R +L Sbjct: 433 ------LLRNVMRSPSDTMRRRSLALRL---TASPFSMGTTALRMADRHPDERVRVVLSE 483 Query: 471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIR 530 D ++ + ++ ++ H +VLV T L + + E EG+ Sbjct: 484 ---IGHLAMDISSSARENKALQITHQWIREHG--RVLVFTQHTDTVTGLLRRM-EAEGLT 537 Query: 531 AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLL 590 A FH MS ER A F + A V++ ++ G+EG+N QF + ++ +DLP+NP + Sbjct: 538 ARAFHGSMSASERAATIAAFRSGE--APVMISTDAGAEGQNLQFCNCVLNYDLPWNPMRI 595 Query: 591 EQRIGRLDRIGQAHD-IQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYND 649 EQRIGR+DR+ Q D + + Y +T + R E L FE TI + + Sbjct: 596 EQRIGRVDRLTQPRDEVFVANLYACRTIDESVYRLLAEKLRMFELLFGQVTTILGELDDS 655 Query: 650 LINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQ 709 + F + L +L R+R + + G+ + + + E + Sbjct: 656 KSATFETRVLDALFAESDAKMERLLTQLGTELADARERAGTLIAADGDLSSWMTAAFEHR 715 Query: 710 DDDTN--------------------LIAFAMNLFDIIG---INQDDRGDNMIVLTPSDHM 746 T + + + + +G ++ G+ + D Sbjct: 716 KGLTKAGSAELMPELTERARRRQRRVQTWVRRVLEALGAQVLHDTGDGEGAFLTVQFDEE 775 Query: 747 LVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILS------------G 794 + G + + FDR DA+ P+ L L+ Sbjct: 776 FEEELGG--RTLMHLAFDRHGLEHHPDAELCAVGSPVFDELLGLLRMRGDMHATVPVIPD 833 Query: 795 DTGSS------TISLLKNKALPVGTLLVELIYVV---------EAQAPKQLQLNRFLPPT 839 D G S TI L++ + +P GT + + + N Sbjct: 834 DLGPSPFRHAPTIRLIRRRLIPAGTWSGQATFRATVGEAETTEHIITAEINGANDV--RL 891 Query: 840 PVRMLLDKNGNNLAAQVEFETF-------NRQLNAVNRHTGSKLVNAVQQDVHAILQLGE 892 P R L D Q+ E R+L + R ++ +Q++ Sbjct: 892 PRRPLSDGEVLPATFQMPSEIVAEFEREAARRLEKIRRDRAEEVEQQQRQEL----DRVR 947 Query: 893 AQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIR 932 + + L +E RL + P++R Sbjct: 948 RSYQARIAEALYEDEARLRRALKSEERRL----SRRPDVR 983 >UniRef50_A0YV27 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YV27_9CYAN Length = 1140 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 152/737 (20%), Positives = 273/737 (37%), Gaps = 80/737 (10%) Query: 124 DRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAH-DVGRRHAPRVLLADEVGLG 182 D L + + + P+ + +PHQL + + + R LLAD+ G G Sbjct: 70 DSLFLFIESARIKTAFEYDPHFAVSLSGVRPLPHQLEAVYERILPQVRLRFLLADDPGAG 129 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTI AG++L + L A ER+LI+ P L QW E+ +F F + A Sbjct: 130 KTIMAGLLLKELKLRSAIERILILAPAPLTIQWQDELKSKFAETFEVITST--LAKNQLA 187 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED----APSREYQA 298 NP++ + I S+DFA+R + + L + +WDL+++DEAH + Y+ Sbjct: 188 GNPWERFRQCIASIDFAKRD-EVISGLLQVDWDLVIIDEAHKCSARTQGEDLRRTGRYKL 246 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQ------------FVEEQ 346 E+L+++ +LLLTATP Q ++ LRLLDP++F F+ Sbjct: 247 AEELSKNTERLLLLTATPHQGDVDQFHNFLRLLDPDQFISNTHNTQMLCLENSPWFLRRI 306 Query: 347 KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSM 406 K + + + ++ E I + + + A L Sbjct: 307 KEELRDFEGQKLFKPRHAITVPFNLSQAEEYLYNQITTYINRYLGQTTGRRQATVALART 366 Query: 407 LMDRHGTS--RVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRA 464 ++ R S ++ + + + F +L Q Q + + EDR+ Sbjct: 367 VLQRRLASSLNAIWNSLKRRYQRFSNLLEELEQLSPQEQRQRLMNFGCSVDTETDNEDRS 426 Query: 465 RDMLYPERIYQEFEGDNATWWN-------------------FDPRVEWLMGYLTSHRSQ- 504 D L + + ++ L L Sbjct: 427 EDELENVAVESTIAEKIEQLREELQELKRLVKLTQETIELGTERKLNELQNLLKRSEFDE 486 Query: 505 ------KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ 558 ++L+ T L+Q L ++ G H GM++I+R A F Q Sbjct: 487 LSEGEGRLLIFTEHRDTLQYLKQNL-QQWGYSTCEIHGGMNVIDRKTAQKNFQFNK---Q 542 Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ 618 + + +E EG N QF MV +D+P+NP+ LEQR+GR+ RIGQ D+ I T + Sbjct: 543 ICIATEAAGEGINLQFCRLMVNYDIPWNPNRLEQRMGRIHRIGQKRDVYIFNFVAVNTVE 602 Query: 619 SVLVRWYHEGLDAFEHTCPTGRTIYDSV----------YNDLINYLASPDQTEGFDDLIK 668 ++ + LD ++D + + +L+ E D+ I Sbjct: 603 GRVLEKLLKKLDEIRA--AMNDRVFDVIGQLLQLNDIRFEELVRQATYSQADE--DEAIA 658 Query: 669 NCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLI-----AFAMNLF 723 LEQ L + + ++ + + ++ L+ F Sbjct: 659 QIDRLSPERLKDLEQATGLALATSHVDFSQIRLKTQTQDFRSEERRLMPRYVEEFFKRAC 718 Query: 724 DIIGINQDDRGDNMIVL-TPSDHMLVPDFPGLSEDGIT------ITFDREV--ALAREDA 774 + + +N + R D + + + + G +TF +E A +DA Sbjct: 719 EYLHLNLEVRADGLWRIPYLKEEFRSNTLEAVRRLGTPEKYYPKLTFYKEQLEAAVHQDA 778 Query: 775 QFITWEHPLIRNGLDLI 791 +F++ H L + + + Sbjct: 779 EFLSPGHCLFASIAERL 795 >UniRef50_C7HAN1 ATP-dependent helicase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAN1_9FIRM Length = 961 Score = 358 bits (918), Expect = 8e-97, Method: Composition-based stats. Identities = 165/909 (18%), Positives = 334/909 (36%), Gaps = 108/909 (11%) Query: 105 KLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGL-RGQRTSLIPHQLNIAH 163 ++ P + +L Y ++ + + +P+QL+ A Sbjct: 68 QIQIVDPASIQLIADSSPFFKRSLLYLESQWRQQLPTDTNLHIGHKAAMDPMPYQLDPAK 127 Query: 164 DVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRF 223 +R R+L+AD VGLGKT+EAG+++ + + G +R+L++ +++ Q+ EM RF Sbjct: 128 LSLQRPRQRILIADTVGLGKTLEAGILMSELIARGKGKRILVVTVKSMMTQFQKEMWNRF 187 Query: 224 NLRFALFDDERYAEAQ---HDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVD 280 + D R + + YNPF I S+D +R + HL +A WD++V+D Sbjct: 188 TIPLVRLDSNRIQKIRASLPSNYNPFFYYDKTIVSIDTLKRDVEYRTHLEKAYWDIIVID 247 Query: 281 EAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFA 340 EA ++ D ++ + + LA +++L+ATP +S + + +LDP D Sbjct: 248 EAQNVAERGDHQAQRSRLAKLLANRSDTMIMLSATPHDGRAKSFASLMNMLDPTAIADPE 307 Query: 341 QFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSAR 400 + E L + +D N + E+ + A++ E A Sbjct: 308 NYTPED----------IRGLCIRRFKSDVKNQVNGSFLERQVTLEHCHASAQEEYAFDLL 357 Query: 401 QEL-VSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKS 459 E+ + M + +S LF+ + L P + +I+ +K Sbjct: 358 AEMQLEMDAGKAKSSGRLFKTS-----------LEKSLFSSPAACRKSIEARLKKLYKKY 406 Query: 460 AEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS--------HRSQKVLVICA 511 D D+ E ++ + R + L+ L S +V++ Sbjct: 407 TADDISDIRLLEELHTALGQVTPENFT---RYQKLLELLRSDSYGWNPKDPGDRVVIFTE 463 Query: 512 KAATALQLEQVLREREGIRAAV---FHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSE 568 + T L + LR G++++ GMS E+ R F ++ ++L+ S++ SE Sbjct: 464 RIETMNYLAEHLRTDLGLKSSAIQEISGGMSDAEQQRIVEDFGRTESSTRILVASDVASE 523 Query: 569 GRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTA-----QSVLV 622 G N + SH ++ FD+P++ + +QR GR+DR GQ I +E ++ Sbjct: 524 GLNLHYLSHRLIHFDIPWSLMVFQQRNGRIDRYGQQKRPDIRYLLIESNNKQIKGDMRII 583 Query: 623 RWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE 682 + + + + + + G D ++L A + Sbjct: 584 EILIQKEEQALKNIGDPALLLGKFNVEEEETVIAEAIESGSD-----ADTFAQSLDADAQ 638 Query: 683 QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLI---AFAMNLFDII------------- 726 + + + + E + E + E D L + + Sbjct: 639 EF-NPFEALMAAASETEETAIEQLSETVSDETLFTDKEYLEQAVQYLNQTDSNPVQELQT 697 Query: 727 --GINQD---DRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEH 781 G++ + + L P + M + LS+D ++ +++ W Sbjct: 698 VSGLDIRLTPEMERRLRALIPEEAMPQGETLRLSDD-KAFCMEQMRTSMQKNMDEAAW-- 754 Query: 782 PLIRNGLDL--ILSGDTGSSTISLLKNKALPVG--TLLV--ELIYVVEAQAPKQLQLNRF 835 P + L I S + + + +A +G +L E +Y+V P Sbjct: 755 PSSQYLWKLHPIFSWVNDKAGLLFKRAEAPVLGLPGVLYPGEALYIVSGSVPN------- 807 Query: 836 LPPTPVRMLLDK-------NGNNLAAQVEFETFNR---QLNAVNRH--TGSKLVNAVQQD 883 L TP L+D+ +G + E + + + ++ + A Sbjct: 808 LKSTP---LIDEWFGLLYRDGQFIQRLSMEEVVQKAGLRSARIPNTNCITNQSIVAASSL 864 Query: 884 VHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNR 943 +H ++ + + + + + E + KL AE+ +L L+ + L E Sbjct: 865 LHDVVTQAKTYLTERYQQY----QAEMNPKLDAEVDKLIELQEKHKEYYQTTLFEHERQL 920 Query: 944 QQVMESLDQ 952 Q+ +D+ Sbjct: 921 QEQERRVDK 929 >UniRef50_C8WXJ2 SNF2-related protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WXJ2_ALIAD Length = 572 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 139/561 (24%), Positives = 229/561 (40%), Gaps = 41/561 (7%) Query: 124 DRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGK 183 + F L AR+ L + + +PHQ+ A V R R +LADEVGLGK Sbjct: 45 ELFRLGVMARQAWIAPTFDQLLALEHVQFTPLPHQVETALRVVRDLRGRAILADEVGLGK 104 Query: 184 TIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAY 243 TIEAG++L + L+ G R L++VP +L QW E+ ++F + DE Sbjct: 105 TIEAGLVLKEYLVRGLVRRALVLVPASLVSQWTKELNQKFRIDAIPQRDEWT-------- 156 Query: 244 NPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLA 303 ++ E +V+ S+D A+R E + WD+++VDEAH L ++ ++ +Q + QL Sbjct: 157 --WEAEGVVVASIDTAKRPPH-AERVQAQWWDMIIVDEAHKL---KNPSTKNWQLLNQLQ 210 Query: 304 EHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGN 363 +LLLTATP Q ++ + LL P + A+F E A L Sbjct: 211 H--KYMLLLTATPIQNQLKELHTLVTLLKPGELGNPAEFAERFVASPRTPKDPAAL---- 264 Query: 364 KLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRN 423 Q I ++ + + ++ + + ++ R + + Sbjct: 265 ---------------RQTISRVMIRNRREDGSLELPKRHVRVVPVELTPEERAFYEAVQA 309 Query: 424 GVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNAT 483 ++ +R LP S A S E + P+R Sbjct: 310 FLRSEFERSQTARTSILPLITLQREICSSAYAALLSLEKMLKKARDPDRARCLQSLIEQG 369 Query: 484 WWNFD-PRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 +VE ++ L +K+++ A+ L L++ GI A F G + Sbjct: 370 TSIPSYAKVEAVLKML-EDAPEKIIIFTEYRASQDFLMYTLKKH-GISAVPFRGGFRRGK 427 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 +D F+++ +VL+ +E G EG N QF HM+ +DLP+NP LEQRIGR+ R+GQ Sbjct: 428 KDWMRELFSKK---IRVLVATESGGEGINLQFCHHMINYDLPWNPMRLEQRIGRIHRLGQ 484 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG 662 H I + T + ++ E + FE I V DL Sbjct: 485 THACHIAHLVTKDTIEEHIMEILQEKVRMFEAVIGRLDDIVSDVRLDLWEKRIFEAAMTS 544 Query: 663 FDDLIKNCREQHEALKAQLEQ 683 DD + + ++ + Q Sbjct: 545 RDDEEFVTQLKSIQVEDLMMQ 565 >UniRef50_B1KKL5 Helicase domain protein n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KKL5_SHEWM Length = 937 Score = 354 bits (909), Expect = 7e-96, Method: Composition-based stats. Identities = 146/708 (20%), Positives = 269/708 (37%), Gaps = 74/708 (10%) Query: 128 LRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEA 187 +R + ++ + L +PHQ+++ H + L+AD+VGLGKT+E Sbjct: 133 VRLKTLAHAITIWNENTGALSNLNIDPLPHQIHLVHHILNSGNLNWLIADDVGLGKTVET 192 Query: 188 GMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN--LRFALFDDERYAEAQHDAYNP 245 +++ + VL+I P L QW E++ + RF ++ + + +H Sbjct: 193 ILLMSALQHRKQLKSVLLITPAGLTQQWQEEIIEKAPNLPRFNVYGTDFPTKHEH----H 248 Query: 246 FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS----EDAPSREYQAIEQ 301 + V+ S+D + L ++DL++VDEAH L + S ++ + + Sbjct: 249 WFKNDFVVASMDRLKNKDHLNILLDSRQYDLIIVDEAHRLSRRQYGYKLDSSERFELVAE 308 Query: 302 LAEHVP--GVLLLTATPEQLGMESHFARLRLLDPNRFHD----------FAQFVEEQKNY 349 L + ++LLTATP Q + A L LL P R D ++FV +NY Sbjct: 309 LRKQNQNGNLILLTATPHQGMQDKFIALLELLRPERKSDLLKIDVNPEVLSEFV--FRNY 366 Query: 350 RP-VADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM 408 + V D + K + E E D S R+ Sbjct: 367 KADVTDLDGNFVFHGKTTRSVQVQTNEQAIEFDSSLRKYLKRGYSASKALGREGNAI--- 423 Query: 409 DRHGTSRVLFRNTRN-GVKGFPKRELHTI-KLPLPTQYQTAIKVSGIMGARKSAEDRARD 466 G ++R V K L+ + +L ++ + + E+ Sbjct: 424 ---GFVMTVYRKLAASSVAAIHKALLNRLDRLQNQLSSLDSVDIDEDSPFQGEQEESLAQ 480 Query: 467 MLYPERIYQ-------EFEGDNATWWNFDPRVEWLMG-----YLTSHRSQKVLVICAKAA 514 + + E D D + + + L ++ +KVL+ + Sbjct: 481 KSSEKEFFSGEIGLLKELIIDATNLLEHDNKSKQFIDTIITKILKNNPKEKVLIFTEYRS 540 Query: 515 TALQLEQVLREREGIRAA-VFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ 573 T L + L+++ G + + + GM + ER + F + Q L+ +E G EG N Q Sbjct: 541 TQQYLAKTLQQKIGADSVNLIYGGMKLDERKQQIYDF---ENTGQFLISTEAGGEGINLQ 597 Query: 574 -FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAF 632 M+ +DLP+NP L QR+GRL R GQ + + + ++ + ++A Sbjct: 598 EHCHIMINYDLPWNPMRLVQRVGRLYRYGQLKRVVVFNINSSDSLDEKVLETMYGRVEAV 657 Query: 633 EHTCPT------GRTIYDSVYNDL-----INYLASPDQTEGFDDLIKNCREQHEALKAQL 681 + D + ++ I + Q+E + + E E K Sbjct: 658 VKDLAQVQSSEFNDALMDDILGEVSSLIDIESILENAQSEAIERTNQRINEAVEKAKESA 717 Query: 682 EQGRDRLLE-IHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDD--RGDNMI 738 E RD I+SN + +I +Q ++ AF + +++ I D + Sbjct: 718 ELQRDLFQHAINSNDVRNDNPI--NINKQ----HVAAFISGICELLDIEIMSKLHNDEVW 771 Query: 739 VLT-PSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIR 785 L P + M + D I+FDR++A R + Q+I + L++ Sbjct: 772 QLRIPPNVMELLQTKRSRHD---ISFDRKIASTRANTQYIDVDSYLMK 816 >UniRef50_C5VAI1 Helicase domain protein n=2 Tax=Corynebacterium matruchotii RepID=C5VAI1_9CORY Length = 1167 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 160/811 (19%), Positives = 281/811 (34%), Gaps = 86/811 (10%) Query: 45 RSDSPVTRVMFNPGDTITSHD-GWQMQVEEVKEENGLLTYIGTRLDTEESGVAL--REVF 101 +++ P+T G + + ++ V + + + + + + Sbjct: 3 KNNPPLTLDQLRDGQRVRGIVPNQTVTIKHVDRLDDVTAEVIYCDEAGHYSPVILTPDRL 62 Query: 102 LDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNI 161 ++V F G D F L A + + P + +PHQ+ Sbjct: 63 ARVEIVTESGDIPAFDGNADD---FRLVAEALRITYAARHDPMVAVNSSDVDPLPHQIRA 119 Query: 162 AHD-VGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEML 220 ++ + R R LLAD+ G GKTI AG+ L + +L + ER +I+VP L QW E+ Sbjct: 120 VYEELLPRVPLRFLLADDPGAGKTIMAGLYLKELILRSSCERAIIVVPGGLVEQWRDELA 179 Query: 221 RRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVD 280 ++F+L F +F+ NPF+ +I +D R+ + + L + +WD+ +VD Sbjct: 180 QKFDLHFEVFN---ATSDDSTGKNPFEAHPYLIVRMDQIARNDRLMRLLEQVKWDVAIVD 236 Query: 281 EAHHLVW------SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN 334 EAH + E ++ ++ + L+E LL+TATP E + + LLD + Sbjct: 237 EAHRMAAHYSLWAGEINATKRFKLGQLLSETAHNFLLMTATPHSGKEEDFQSFMSLLDRD 296 Query: 335 RFHDFAQFVEEQKN------YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQA 388 RF Q+ + R + + L G L + + L + Sbjct: 297 RFE--GQYRQGIHRTDTKGLMRRMVKEDLLTLDGRPLFPERRAYTVPYELSRAERDLYEQ 354 Query: 389 ANSDSEDAQSARQEL------------VSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTI 436 + D + + +L R +S + K +R Sbjct: 355 VSDYVRDEMGKADAIQDGKRRNNVGFALMVLQRRLASSPEAILRSLERRKAKLRRSQREY 414 Query: 437 KLPLP-------TQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDP 489 P T + + + R +A + + + N D Sbjct: 415 DAPNDYDSAVSETNWAELEQQVDEVVDRATAAQDQVQLTHEIAVLDGLIATARRVRNQDE 474 Query: 490 RVEW--LMGYLTSH-------RSQKVLVICAKAATALQLEQVLREREG--IRAAVFHEGM 538 +W L L S ++K+++ T LE + + G H G Sbjct: 475 DRKWVELRKILESKVLTGTNGENRKIIIFTEHRDTLTYLEDKITTQLGSTDAVVTIHGGT 534 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 R FA D VLL ++ EG N Q A MV +DLP+NP+ +EQR GR+ Sbjct: 535 PRHLRQAIREQFAH-DPRTLVLLATDAAGEGLNLQRAHLMVNYDLPWNPNRIEQRFGRIH 593 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGL------------DAFEHTCPTGRTIYDSV 646 RIGQ + T + + E + + T + Sbjct: 594 RIGQREVCHLWNLVAHNTREGDVFNRLLEKIEVMSEAYNGNLFNVLGDTDSFDGRPLKDL 653 Query: 647 YNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESI 706 + I Y P+ + D +I K E R L + + ++ Sbjct: 654 LIEAIRYGDQPETRQWLDKVIDASVS-----KGLDELRAKRALSEDIFSSRELDQVRNTM 708 Query: 707 EEQDD----DTNLIAFAMNLFDIIGINQDDRGDNMIVLT--PSDHMLVPDFPGLSEDGIT 760 + ++ + +F + F + D R +T P L+ D + Sbjct: 709 RDAEERKLQPGFIRSFFIPAFKRLRGLIDKRESGCYKVTYVPP---LLRDIASRQYEC-- 763 Query: 761 ITFD---REVALAREDAQFITWEHPLIRNGL 788 +TFD + A DA I HPL+ L Sbjct: 764 VTFDVDYKHPAGTHHDAALIAPGHPLLDAVL 794 >UniRef50_A1T433 Helicase domain protein n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T433_MYCVP Length = 964 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 168/739 (22%), Positives = 275/739 (37%), Gaps = 79/739 (10%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRR-HAPRVLLADEVGL 181 D+F L A + P + +PHQ+ +D H R LLAD+ G Sbjct: 73 PDQFWLAIEALRLRHAAVLNPLLAVSSSNVEALPHQVQAVYDCMLTGHPKRFLLADDPGA 132 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTI AG+ + + L G R LI+VP +L QW E+ +F+L+F +F++ ++ + Sbjct: 133 GKTIMAGLFIKEALARGWIRRCLIVVPGSLVEQWQNELREKFSLQFEVFENSLLGDSPDE 192 Query: 242 AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLV----WSEDAPSREYQ 297 + F +I LD RS + + +DL + DEAH L S ++ ++ Sbjct: 193 SLQNF---PFLIARLDQFSRSSELTARAVDGAYDLAIFDEAHKLAVSSWGSTVTKTKRFK 249 Query: 298 AIEQLAEHVPGVLLLTATPEQLGMESHFARLRLL---------DPNRFHDFAQFVEEQKN 348 E + + VP LL+TATP + L LL DP + V+EQ Sbjct: 250 LAEAIRDAVPSTLLMTATPHNGKDADYREFLTLLGSADQPVVEDPAGNGLMRRLVKEQLV 309 Query: 349 Y-----------------------RPVADAVAMLLAG--NKLSNDELNMLGEMIGEQDIE 383 + + +AV+ + NK+S+D+ Sbjct: 310 HLDGTPLFPERRASTVPYRLSPIESELYEAVSEYVREEMNKVSDDDTRRSVGFALVVLQR 369 Query: 384 PLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQ 443 L + + R L + H T L + + G + + Sbjct: 370 RLASSPQAILRSLTRRRDRLRAQADQAHATEGKLAASLAATL-GLGSDDPDEMSSLRAET 428 Query: 444 YQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH-- 501 YQ + VS AR AE A ++L +R+ + + D + L LTS Sbjct: 429 YQDEV-VSVATNARTPAELEA-EILVLDRLV--IKAEAVYSARADAKWAALAELLTSEAM 484 Query: 502 -----RSQKVLVICAKAATALQLEQVLREREG--IRAAVFHEGMSIIERDRAAAWFAEED 554 + +K+++ T LE L E G + V H MS +R RA A F E Sbjct: 485 FEADRQRRKIIIFSENRDTLDYLEDRLVELLGRTVDVQVIHGAMSWTDRRRAQANFIAEP 544 Query: 555 TGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLE 614 + + VL+ ++ EG N Q A MV +D+P+NP+ LEQR GR+ RIGQ H + Sbjct: 545 SSS-VLIATDAAGEGVNLQVAHLMVNYDVPWNPNRLEQRFGRIHRIGQRHTCHLWNLVAA 603 Query: 615 KTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASP--DQTEGFDDLIKNCRE 672 T + + R E ++ G ++D + L S + G + Sbjct: 604 DTREGDVFRTLLEKVEVQREAL--GDQVFDVLGEVLTEISLSQLLRRAVGGEAPRGEIAS 661 Query: 673 QHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQD-----DDTNLIAFAMNLFDIIG 727 Q +++ +LE ++ S + A+ E F + + Sbjct: 662 QLDSVSGRLESAVEKRAASVSTLTPEELAVLRREMEIAKAMSFQPDVARDFMVRAASLFH 721 Query: 728 INQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQF-------ITWE 780 ++ RGD V + + +DR +D F + Sbjct: 722 VDITMRGDAWQV-----GYVPTRLRDQFGSSLMARYDRVAFEHSDDQVFAADPPELMAPG 776 Query: 781 HPLIRNGLDLILSGDTGSS 799 HPL+ D + GSS Sbjct: 777 HPLVSALAD-AAGEEFGSS 794 >UniRef50_D1B6S6 Helicase domain protein n=7 Tax=Bacteria RepID=D1B6S6_THEAS Length = 969 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 182/882 (20%), Positives = 324/882 (36%), Gaps = 105/882 (11%) Query: 150 QRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPE 209 +PHQ+ R LLADEVGLGKTIEAG+I+ + L G R L+I P+ Sbjct: 90 SSVIPLPHQIRALSRAISNDRVRYLLADEVGLGKTIEAGLIMRELKLRGLVRRTLVIAPK 149 Query: 210 TLQHQWLVEMLRRFNLRFALF-------------------DDERYAEAQHDAYNPFDTEQ 250 L QW+ EM FN F L ++Q N + Sbjct: 150 GLVTQWVAEMRAHFNEHFQLVLPDDIKTLSRISAVASPESRVSGQEDSQPVTRNSWTLFP 209 Query: 251 LVICSLDFARR---------------SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 V+ +D + +++R E L A WDL++VDEAH L S D + Sbjct: 210 QVVVPMDSVKPLDKRRGWSREQVAEYNRERFEDLISAGWDLVIVDEAHRLGGSTDQVA-R 268 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ--------K 347 Y+ + LAE P +LLL+ATP Q ++ + L+D F D + +E+ + Sbjct: 269 YKLGQGLAEAAPYLLLLSATPHQGKTDAFHRLISLVDAKAFPDVSSVTKERVQPYVIRTE 328 Query: 348 NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDI-EPLLQAANSDSEDAQSARQELVSM 406 R + L + ++ ++ + E + + A + ++ + Sbjct: 329 KRRAIDAEGKPLFNPRRTELAPVSWKERHWDQRLLYEAVTEYVREGYNQAIAEKRSYIGF 388 Query: 407 LMDRHGTSRVLFRNTRNGVKGFPKREL------HTIKLPLPTQYQTAIKVSGIMGARKSA 460 LM R++ +TR +R + L + + G Sbjct: 389 LMIL--MQRLVVSSTRAIRTTLERRLEALEAPQEQLTLFPMVSEEDWADLDGQEQMDTLL 446 Query: 461 EDRARDMLYPERIYQEF--EGDNATWWNFDPRVEWLMGYLTSHRSQ------KVLVICAK 512 + R + + + D + E L+ ++ +++ KVLV Sbjct: 447 KTRLKALKNERAEVKLLLEAAKRCESQGPDAKAEALLDWIYRLQAEEGDPDLKVLVFTEF 506 Query: 513 AATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNF 572 T L + L ER GI + M + ER R FA++ ++L+ ++ G EG N Sbjct: 507 VPTQEMLMRFLTER-GITVVCLNGSMDLEERKRVQDAFAKD---VRILISTDAGGEGLNL 562 Query: 573 QFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAF 632 QF ++ +D+P+NP LEQRIGR+DRIGQ H ++ E + + + E L Sbjct: 563 QFCHVVINYDIPWNPMRLEQRIGRVDRIGQTHTVRAINFVFEDSVEHRVREVLEEKLAV- 621 Query: 633 EHTCPTGRTIYDSV-YNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEI 691 I++ + + L S FD++ E ++ +E RL E Sbjct: 622 ---------IFEEFGIDKTGDVLDSAQAGRMFDEMYVEAILNPEKVEESVESVVARLQEQ 672 Query: 692 HSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVP-- 749 +A+ A + +D A L + +R + Sbjct: 673 ----AREARTTASVLGATEDLE--PGEAQRLLAHPLPHWVERMTVSYLQAHGGKAERKNG 726 Query: 750 --DFPGLSEDGIT-ITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKN 806 D + + +T + F + A + ++ +T E P +R + G + ++ Sbjct: 727 AWDLTWPNGERLTNVVFTSKEAEEKPLSRHLTLEDPKVRGLAMRLPPFTPGQ-PVPVITL 785 Query: 807 KALPVGTLLVELIYVVEAQAPKQLQLNR-----FLPPTP-------VRMLLDKNGNNLAA 854 L + ++ + + + +R L P P + + L +G A Sbjct: 786 PGLAPEIMGFWSLWQISVTSHESRVASRPDGLVTLDPGPETRRRRIMPLFLADDGRVFAP 845 Query: 855 QVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNE-ADEK 913 +++ L + Q + E Q + L+ A R A E+ Sbjct: 846 TARH-IWDQLLTTPPTILWHLDIETSHQAFDQLRGAAERQGKTIYDELVQAHRERLARER 904 Query: 914 LSAEL---SRLEALRAVN-PNIRDDELTAIESNRQQVMESLD 951 E +R A+ + P +R+ L+ +E ++ E L+ Sbjct: 905 EKGEYAFAARRRAIERIGLPQVRNHRLSLLEQEEERFREQLE 946 >UniRef50_C1XVJ8 DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XVJ8_9DEIN Length = 916 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 183/852 (21%), Positives = 322/852 (37%), Gaps = 81/852 (9%) Query: 119 QIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADE 178 L RA S+ P+ L+ R +QL R+ R+L+AD+ Sbjct: 63 SPGDPALHDLLLRALTLSALHADAPFLALQRSRVVPANYQLVPLLMALRQPRVRLLIADD 122 Query: 179 VGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDE---RY 235 VGLGKTIEAG+I + L+ G A RVL++ P L QW + R F+L F + R Sbjct: 123 VGLGKTIEAGLITKELLVRGKARRVLVLAPAHLLAQWQEALRRFFHLDFVVLSGSNLKRL 182 Query: 236 AEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAH---HLVWSEDAP 292 A NP+ LVI S+D+A++ R + L + +WDL++VDEAH + + Sbjct: 183 ARTLPPGANPWTMHDLVIASIDYAKQDGVRPQVLFQ-DWDLVLVDEAHMAARPPTEKGSQ 241 Query: 293 SREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLD---PNRFHDFAQFVEE---- 345 ++ + +LA VP +LL TATP ES ++ L LD F + E Sbjct: 242 MERFRLVRELARRVPHLLLATATPHNGYTESFYSLLEHLDLAGLGLFKNGTLDREAAKKH 301 Query: 346 --QKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPL--LQAANSDSEDAQSARQ 401 Q+ R V D + E + ++E ++ ++ D A+ Sbjct: 302 VVQRRRRDVEDWFRREGKRSPFPEREAKEVAVEPSRAEVELFEAVRRYQAEVFDPDPAKV 361 Query: 402 ELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIK--LPLPTQYQTAIKVSGIMGARKS 459 + + H R ++ ++ KR ++ + P+Q + A + Sbjct: 362 PQLGRWLALHLMRRA--TSSPKALEKSLKRRKTALETLVAGPSQATQEGPAALFDTAPER 419 Query: 460 AEDRARDMLYP-----------ERIYQEFEGDNATWWNFDPRVEWLMGYLTS---HRSQK 505 D E+ Y E + D ++E L+ L + Sbjct: 420 LLPEEADASLELSLADQARAQAEKAYLEVLLQHLKRSRRDSKLEALIELLKDPLRLGQGR 479 Query: 506 VLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEI 565 VLV T L Q L H MS ER+ F+++ VL+ +++ Sbjct: 480 VLVFTRYKDTLEHLLQSLPLALSQPVFGVHGEMSEREREEVLLAFSQQKQA--VLVATDV 537 Query: 566 GSEGRNFQF-ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD-IQIHVPYLEKTAQSVLVR 623 SEG N Q A+ +V +DLP+NP+ LEQR GR+DR GQ +++ Y +++ + + Sbjct: 538 FSEGLNLQHYAARLVHYDLPWNPNRLEQRNGRIDRFGQPEPTVRLRTLYYQRSFDVAVFK 597 Query: 624 WYHEGLDAFEHTCPTGRTIYDS---VYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQ 680 E + + + +L + E + +Q EA +A Sbjct: 598 LLLEKAERIRQELGVVPAFFGDKGYLRQNLEALWVQDWRGERLGQ--ASLFQQVEAEEAS 655 Query: 681 LEQGRDRLLEIHSNG------GEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRG 734 + Q R+++ G + + L E+++ +L +F ++ +G G Sbjct: 656 MAQ---RVVQEGFYGHSEFSLPDVERRLQEAVDRIGGHQSLESFVLDGLRYLGWQIQ--G 710 Query: 735 DNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLI--- 791 + + PGL +FD E L + + HP++ + + + Sbjct: 711 EGPYTARQG---VGETIPGLESTFGPFSFDPEAPL---GVEVLDLAHPVVEHLVAHLRFR 764 Query: 792 --LSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNG 849 D + + PV ++ P+ + R LLD Sbjct: 765 AYRDLDGARTAFLTVAAATPPVALYHYRARFL----GPQGEAMEHQFRQA--RRLLDAQ- 817 Query: 850 NNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQL-GEAQIEKSARALIDAARN 908 L+ Q + +NR+ + ++ + + A L+ GE ++ + L Sbjct: 818 -ELSQQEAEDLWNRREKTAPLLSTDQMRVLTRMALQAPLEAMGEKGALEALKKLRQE--- 873 Query: 909 EADEKLSAELSR 920 E L ++L R Sbjct: 874 --RETLRSDLVR 883 >UniRef50_B1I2C6 Helicase domain protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2C6_DESAP Length = 1147 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 187/951 (19%), Positives = 344/951 (36%), Gaps = 119/951 (12%) Query: 109 SKPQDRLFAGQIDRM-----DRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAH 163 S+ +RL + D L +A PY GL R +PHQL + Sbjct: 54 SEDLERLTITETDYSYDGDGKLLRLGLQAYALGIAYEFDPYFGLSISRVDPLPHQLEAVY 113 Query: 164 DVGRRH-APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRR 222 D + R LLAD+ G GKTI AG+++ + L G AER+L++ P L QW E+ + Sbjct: 114 DYLLKLARVRFLLADDAGAGKTIMAGLLIRELQLRGLAERILVVCPANLSFQWQRELKEK 173 Query: 223 FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEA 282 F+ +F + + N + ++ VI SLD A+R ++ L L + WDL++VDEA Sbjct: 174 FDEKFLVLKGGDIRD--QFGVNQWLEQKKVITSLDLAKR-EEILPGLRQVRWDLVIVDEA 230 Query: 283 HHLVW-SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQ 341 H + W + Y E L + +L+LTATP + + L+LLD + + D Sbjct: 231 HRMSWTPPARKTARYALGELLRDTSDHILMLTATPHKGDPNNFSLFLQLLDRDAYADVRS 290 Query: 342 FVEEQKNYRP---VADAVAMLLAGNKLSNDELNMLGEMIGEQ------------------ 380 E R + ++ + D + + ++ ++ Sbjct: 291 IREAMNRRRAPFYLRRTKEAMVYFPERRPDGIWVAEKIFTKRIPHTVDFQIDGPEFELYK 350 Query: 381 DIEPLLQAANSDS----EDAQSARQELVSMLMDRHGTS-----RVLFRNTRNGVKGFPKR 431 D+ ++ ++ + +D ++ + L R S R N ++ KR Sbjct: 351 DVTRFVKRQSAKAAARGDDPRARAVGFLMSLYQRRLASSTYAVRHSLENRARRLEEGLKR 410 Query: 432 ELHTIKLPLPTQ-------------YQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 L P + ++ + +AE ++ R+ ++ + Sbjct: 411 AQELAVLAPPDLPDPEDLEEMEESERERLEQMLEAITLASNAEQVREEIAELRRLAEQAK 470 Query: 479 GDNATWWNFDPRVEWLMGYLTS-----HRSQKVLVICAKAATALQLEQVLREREGIRAAV 533 + + ++ L L ++++L+ T L L+ G++ Sbjct: 471 --TVESSDSEAKLSKLKDLLHKEGFFDQPAKRLLLFTEFKDTLTYLVGNLKT-WGLKVGY 527 Query: 534 FHEGMSIIERD----RAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDL 589 H GM RD R A + QVL+ +E EG N Q + + +D+P+NP+ Sbjct: 528 IHGGMKPGSRDEPGTRLYAEQQFREGEIQVLVATEAAGEGINLQVCNILFNYDIPWNPNR 587 Query: 590 LEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYND 649 LEQR+GR+ R GQ D I T + +++ E L +++ V + Sbjct: 588 LEQRMGRIHRYGQRKDCLIFNFVATNTIEGRVLQRLLEKLQEIRDAL-DDDAVFN-VVGE 645 Query: 650 LINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGR------DRLLEIHSNGGEKAQALA 703 ++ + + E L +++GR + L + S A + Sbjct: 646 VLPAAHIERILRDYYAGKLGDADLEERLLQNVDEGRFRAICENALEGLASKKLNLAMLIE 705 Query: 704 ESIEEQDD---DTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDH----MLVPD-----F 751 Q+ + F D + + + P+ M Sbjct: 706 RRARAQERRVVPETIARFIREAADYVPLKLKVVENMAHTFEPARTPSVLMRYERDPDWKL 765 Query: 752 PGLSEDGITITFDREVALAREDAQFITWEHPLIRNG-----LDLILSGDTGSSTISLLKN 806 P +S + DRE A R +++T HPL + + G+ SL Sbjct: 766 PAVSAKYPRCSTDRETA-ERYSLEWVTPGHPLFEALRRHTYAQAVEAFGKGACYYSLQHE 824 Query: 807 KALP-----------VGTLLVELIYVVEAQAPKQL------QLNRFLPPTPVRMLLDKNG 849 + +G ++ E ++ VE A + L F P P L + Sbjct: 825 EPSRIDFYRARVVDGLGHVVHERLFAVETTAAGEHFLREPNMLGNFTPAEPPAGL---SA 881 Query: 850 NNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNE 909 A + ++ L T + + V+ + ++L ++ + A I A + Sbjct: 882 VAFAPEASAWLYDNALQPFLEETRKERIAEVE-RIAEHVELSLTELLQRADEEIGKAIED 940 Query: 910 ADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL 960 ++ + RL +A N R EL + ++ E Q L A+ Sbjct: 941 KEKGIPGADGRLV--QAEN---RHAEL--MARRERRRKELEQQRSLTLQAV 984 >UniRef50_A1UB35 Helicase domain protein n=5 Tax=Actinomycetales RepID=A1UB35_MYCSK Length = 1201 Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats. Identities = 205/983 (20%), Positives = 351/983 (35%), Gaps = 122/983 (12%) Query: 77 ENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQD---RLFAGQIDRMDRFALRYRAR 133 +N + + + E+ +L PQD ++ + D +R A A Sbjct: 198 QNAVTLQSVEDDRLGDELRVVWELEPGRRLK--PPQDLPTKIAPDRFDPPERLAAFIDAL 255 Query: 134 KYSS------EQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEA 187 ++ + + + P+ G + P+QL +LLAD+VGLGKTIEA Sbjct: 256 RWGAVTSADVKTVQAPFRS--GAKVE--PYQLEPLRRALSAPRANLLLADDVGLGKTIEA 311 Query: 188 GMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD---AYN 244 GM++ + LL A V+I+ P L +W EM +F L F + + E E + N Sbjct: 312 GMVIQELLLRHRARTVIIVCPAGLSVKWQNEMHDKFGLDFRIVNSETMKEVRRTHGVHAN 371 Query: 245 PFDTEQLVICSLDFA---RRSKQRLEHLC--------EAEWDLLVVDEAHH--------- 284 PF +I S+ + R +Q + L +D+LVVDEAHH Sbjct: 372 PFTLFPRIIVSMAWLPGPRAQRQLRDALITKSRGAGPRFAFDVLVVDEAHHVAPATPTRT 431 Query: 285 ----LVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFA 340 L S+ +A+ LAE L L+ATP ES A L ++DP RF Sbjct: 432 DKVGLRKGYAVDSQRTRAVRDLAERSEHRLFLSATPHNGYTESFTALLEMIDPQRFV-RG 490 Query: 341 QFVEEQKNYRPVADAVAMLLAGNKLSNDELNML------GEMIGEQDIEPLLQAANSDSE 394 +F++EQ + L G +L E ++ I + + Sbjct: 491 KFIDEQALQTVAVRRLKKDLPGQFHERKVEKLLITPSADEEAAYDRLIAFTQRRDTAAKG 550 Query: 395 DAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSG-- 452 D + A+ +L R +S V F T + K +R L + +Y + + Sbjct: 551 DDRGAKDMATLLLKKRFFSSPVAFARTVDVYKDTRQRGLV---VDFDAEYDEVLGLDADE 607 Query: 453 -----IMGARKSAEDRARDMLYPERIYQEFEGDNATWWNF------DPRVEWLMGYLT-- 499 + + ++ L P + + D + W D ++ L+ YL Sbjct: 608 LEEGRVEQPETQTLQQTKNALPPLTAADKDDLDWLSDWGHSYEARPDSKLTALIDYLEAN 667 Query: 500 -----SHRSQKVLVICAKAATALQLEQVLRER--EGIRAAVFHEGMSIIERDRAAAWFAE 552 +++V+V T + +LR+R E R AV +R+ A F Sbjct: 668 TKANGEWLNERVVVFTEYVDTLEWIHGILRQRGYEADRVAVIDGSTDGEQREVIRARFNT 727 Query: 553 EDT--GAQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 + + ++LL ++ EG + Q + +V FD+PFNP+ LEQRIGR+DR GQ HD +I Sbjct: 728 DPSREKLRILLATDAAGEGIDLQDYCHRLVNFDIPFNPNRLEQRIGRIDRYGQTHDPEIR 787 Query: 610 VPYLEK-----TAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD------ 658 + T L+ + + + I + DL L+ D Sbjct: 788 HFATDDEKSQLTRDVDLLARVAKKVAQIMADLGSANEI---IAPDLQRQLSGIDAAPRKG 844 Query: 659 --QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLI 716 + ++ R+ L +L Q E Q + + E D + Sbjct: 845 KAEKSPIGQMLAGGRDVGAEL-TKLAQDITESRETLHLQPANLQRVVDVAFELDRLPPIE 903 Query: 717 AFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQF 776 + D+ G + +T + I FD V D + Sbjct: 904 EVGSDRTDVPVFRLPALGSSWEQVTRGLTTALDRESLRP-----IAFDPAVLAEDPDVVY 958 Query: 777 ITWEHPLIRNGLDLILS----GDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQL 832 + PL++ + S G+ ++ + L ++ +A +L Sbjct: 959 MHLGSPLLQRATRRLRSALWGGERSLERVTAVVVPDLEESFAAAVTRLILIGKAGLRLHE 1018 Query: 833 NRFLPPTPV--RMLLDKNGNNLAAQVEFETFNRQ-LNAVNRHTGSKLVNA---------- 879 FL T + R + G + A + + + L V +L A Sbjct: 1019 EVFLAGTRLGRRQAV---GEHRAEDLLENALDAESLEPVPTSIAEQLAKAWDDDKADGLR 1075 Query: 880 --VQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELT 937 V + V ++ + + A R + L++ A I + ELT Sbjct: 1076 ARVAKAVADRVERRQQAVTAQLEERRTADRERVIATFDRFGATLKSALAEAEAI-ESELT 1134 Query: 938 AIESNRQQVMESLDQAGWRLDAL 960 + R+Q L R+DAL Sbjct: 1135 LFDDERRQSERDLRHIRARMDAL 1157 >UniRef50_C1TPU8 DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPU8_9BACT Length = 955 Score = 348 bits (892), Expect = 9e-94, Method: Composition-based stats. Identities = 149/588 (25%), Positives = 245/588 (41%), Gaps = 56/588 (9%) Query: 150 QRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPE 209 +PHQ++ R LLADEVGLGKTIEAG+++ + L G R L++ P+ Sbjct: 94 SNVIPLPHQIHALSRAISSDRVRYLLADEVGLGKTIEAGLVMRELKLRGLVRRTLVVAPK 153 Query: 210 TLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA------------YNPFDTEQLVICSLD 257 +L QW+ EM FN F+L + + YNP+ I +LD Sbjct: 154 SLAMQWVSEMSTHFNESFSLVNPSDLDALERPGQYVIGKTDHISDYNPWMRFSQAIVTLD 213 Query: 258 ----FARR-----------SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 ARR ++ R E L + +WDL+VVDE+H + S D + Y+ + L Sbjct: 214 SVKPIARRRGWSKEKIRAYNRNRYERLVQGQWDLIVVDESHRMGGSTDQVA-RYKLGQGL 272 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ--KNYRPVADAVAMLL 360 AE P +LLL+ATP Q ++ + LLDP F D E+ + A+ Sbjct: 273 AEAAPYLLLLSATPHQGKSDAFQRLMSLLDPMVFPDLESVTREKVSEFVIRTEKRKAVTA 332 Query: 361 AGNKLSNDELNMLGEMIGEQD---------IEPLLQAANSDSEDAQSARQELVSMLMDRH 411 G L + + E++ + ++ + + + + +L+ R Sbjct: 333 EGKPLFMPRITQTLGVDLERNWAQVALYDAVTDYVKKGYNRAIKDRKPHIGFLMVLLQRI 392 Query: 412 GTSRV-LFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAE--DRARDML 468 TS R T + T P + + + G E + R Sbjct: 393 VTSSSYAIRCTLERRLHALENLRETHASPGEEELEDFTDLDGQTQLDLLVEVNEPGRAKE 452 Query: 469 YPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ------KVLVICAKAATALQLEQV 522 E +A D + E LM + + + K+L+ T L+ Sbjct: 453 MAEVNALLDLARSAEIAGPDVKTEALMSLIFQLQGEENDDQLKLLIFTEFVPTQAMLQTF 512 Query: 523 LREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFD 582 L ER GI A+ + MS+ ER A F + A++L+ ++ G EG N QF +V +D Sbjct: 513 LEER-GIPCAILNGSMSMDERRMAQRDFRDN---ARILISTDAGGEGLNLQFCHVVVNYD 568 Query: 583 LPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT- 641 LP+NP +EQRIGR+DRIGQ+ ++ E + + + L + +T Sbjct: 569 LPWNPMRIEQRIGRVDRIGQSKIVRAVNFLYENSVEGRVREVIQTKLSIILNEMGIDKTN 628 Query: 642 -IYD-SVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDR 687 I D S+ ++I + + E DL + + L+ +++Q R++ Sbjct: 629 DILDTSLSGEVIEKMMTHVIMED-ADLDAEVDQTVQNLQEEMQQVREQ 675 >UniRef50_B8CWH2 Helicase domain protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWH2_HALOH Length = 467 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 118/508 (23%), Positives = 222/508 (43%), Gaps = 56/508 (11%) Query: 179 VGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEA 238 +GLGKTIEAGMIL + + G ++ LI+VP +L QW EM+ +F + D+ + Sbjct: 1 MGLGKTIEAGMILREYMDRGLVKKFLILVPASLGFQWTNEMVNKFKI------DDIFFNR 54 Query: 239 QHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA 298 + + FD + I SLD A+R K +L + ++D+++VDEAH L ++ + ++ Sbjct: 55 KGRGWMYFDHQ---IASLDKAKR-KNHARYLKQIDFDMVIVDEAHRL---KNRDTLNWKF 107 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAM 358 + L + LLLTATP Q ++ + + +L P+ + D+ F + + + Sbjct: 108 VNSLKK--KYCLLLTATPIQNNLKELYNLITILYPDLYKDYKDFKDRYVAGKHLVKNSDQ 165 Query: 359 LLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLF 418 L + D++ ++ + D + + + ++ R L+ Sbjct: 166 L-------------------KVDLDKVMIRNSHDDTGLVFPERHIHQVTVELTPEERELY 206 Query: 419 RNTRNGVKG-FPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEF 477 + VK + +R + I + YQ + S R A R + E Sbjct: 207 NKVTSYVKDEYNRRRVKKISILNLLTYQRELCSSSFALQRTLARSRDKSPYLRELY---- 262 Query: 478 EGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEG 537 A + +++ + L Q ++ AT + L E+ G + +F+ Sbjct: 263 --GLARNIRTNAKIKEVEKILKGIDGQ-AIIFTEYRATQEFIAHYL-EKRGYKTILFNGA 318 Query: 538 MSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL 597 +S ++ F ++ VL+ +E GS+G N QF + ++ +DLP+NP +EQRIGR+ Sbjct: 319 LSSSGKEWIKYIFQQKKD---VLISTEAGSQGLNLQFCNVIINYDLPWNPMKIEQRIGRV 375 Query: 598 DRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIY------DSVYNDLI 651 R+GQ D+ I+ + T + ++ + ++ F+ I + D+I Sbjct: 376 HRLGQTKDVLIYNLATKDTIEEKILNLLYNKINLFKEIIGNMENIIINPRDGKKLEGDII 435 Query: 652 NYLASP----DQTEGFDDLIKNCREQHE 675 ++ D GFD+L K + E Sbjct: 436 KVISQAKDDKDLERGFDELTKKFTTRKE 463 >UniRef50_Q1IY45 Helicase-like protein n=3 Tax=Deinococci RepID=Q1IY45_DEIGD Length = 933 Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats. Identities = 164/759 (21%), Positives = 285/759 (37%), Gaps = 63/759 (8%) Query: 54 MFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVAL-REVFLDSKLVFSKPQ 112 ++ G + + G + V E+ LL D E +GV + S FS PQ Sbjct: 2 KYDIGSMVKTR-GREWIVLPESSEDFLLLKSLGGSDLEVAGVYVGPGGEGVSSASFSLPQ 60 Query: 113 DRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR 172 F+ D LR A K + P+ L P+QL R R Sbjct: 61 ATSFS---DASSARLLR-DAAKLAIRSGAGPFRSLARLGVEPRPYQLVPLLMALRLTPVR 116 Query: 173 VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF-- 230 +L+AD+VG+GKT+EA +I + L G R+ ++ P L QW E+ +F + Sbjct: 117 LLIADDVGIGKTVEAALIARELLDRGEIGRLAVLCPPHLAEQWQAELRSKFGIDATPVLP 176 Query: 231 -DDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSE 289 +R + F+ + VI SLDF + + R + L +A +L++VDEAH Sbjct: 177 TTVKRLERQCRVGESIFERFKHVIVSLDFVKTDRWRDDFLRKAP-ELVIVDEAHTCAEGS 235 Query: 290 DAPSR---EYQAIEQLAEH-VPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEE 345 + S+ Y+ +E LA ++L+TATP ++ + L+LL+P F + Sbjct: 236 EGRSKRHQRYRLLEGLAADPERNLILVTATPHSGKEDAFRSLLKLLNPE-FASLPLDLSG 294 Query: 346 QKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDI----------------EPLLQAA 389 Q+N R A L+ + E+ + L A Sbjct: 295 QQNERARAQLARHLVQRKRADVRSYMDAQTPFPERSDAETTYTLHPEYARLFGDVLAYAR 354 Query: 390 NSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIK-------LPLPT 442 S + ++ ++ + + + L + L Sbjct: 355 ESVQDTGEALNRQRIRWWAALGLLRALASSPAAAAETLSNRATLADEQDVGLIDSLGQDL 414 Query: 443 QYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH- 501 Y A + + + R+ + A D ++ L G + Sbjct: 415 VYDPAEDEGQTLDTTPGTQTESEASEDTRRLLEFAARAEALRGGKDAKLGKLTGIVKDLL 474 Query: 502 -RSQKVLVICAKAATALQLEQVLRE-REGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV 559 +V C ATA + Q LR +G+ +S ER+ A A + ++ Sbjct: 475 ASGHHPIVFCRFIATAEYVAQALRSGLDGVEVRAVTGRLSPEEREAVVADLATAE--RRI 532 Query: 560 LLCSEIGSEGRNF-QFASHMVMFDLPFNPDLLEQRIGRLDRIGQ-AHDIQIHVPY----- 612 L+ ++ SEG N Q S ++ +DLP+NP LEQR GR+DR GQ + +++ Y Sbjct: 533 LVATDCLSEGINLQQDFSAVIHYDLPWNPTRLEQREGRVDRYGQPSKAVKVVTLYGADNR 592 Query: 613 LEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCRE 672 +++ VLVR + + P + ++V + + + + E + E Sbjct: 593 IDRIILEVLVRKHRTIRGTLGLSVPAPDEV-ENVLDLVFQKVLLGENRESMMTPLFELPE 651 Query: 673 QH-------EALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDI 725 H EA ++ + R R + N E AQ LA + D + F ++ + Sbjct: 652 SHDLELRWQEAANREM-RSRSRFAQRSINPEEVAQELAATRAALGDTLAVERFVLDTLKL 710 Query: 726 IGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFD 764 G+ R + P +P+ L +G+ + FD Sbjct: 711 AGVTVTARNGRYEIERPG----LPELRDLFGNGLRVRFD 745 >UniRef50_A4YAV4 Helicase domain protein n=5 Tax=Proteobacteria RepID=A4YAV4_SHEPC Length = 877 Score = 345 bits (884), Expect = 7e-93, Method: Composition-based stats. Identities = 150/727 (20%), Positives = 262/727 (36%), Gaps = 72/727 (9%) Query: 128 LRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEA 187 R + ++ + L +PHQ+++ H + + L+AD+VGLGKTIE Sbjct: 69 FRLKTLAHALRNWNENTGALSSLDIDPLPHQIHLVHRILNSGSLDWLIADDVGLGKTIET 128 Query: 188 GMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNL-RFALFDDERYAEAQHDAYNPF 246 GM+L+ G A+R+L+I P L QW EM +F L F ++ + + + Sbjct: 129 GMLLYALQQRGQAKRILLITPAGLTRQWQEEMHDKFGLGDFQIYGHSFHIHEPRE----W 184 Query: 247 DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA----PSREYQAIEQL 302 VI S+D ++ L WDL+V DEAH L + S + L Sbjct: 185 KMHDHVIASIDKLKQESHLELLLQADAWDLVVFDEAHRLSRRQYGLHYDTSERFNLAHSL 244 Query: 303 --AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 ++ +LLLTATP Q + + L LL P+R ++FA + +PV + ++ Sbjct: 245 RRSKKARSILLLTATPHQGMQDKFISLLELLRPDRKNEFALL-----SLKPV--LLQDMV 297 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMD----------- 409 N ++ + + L N S D A Q+ + Sbjct: 298 IRNYKADVTDAEGNFVFHGKSTIALEVPVNQQSIDFDQALQDYLRKGYQAGKNKGYSGNA 357 Query: 410 ----RHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRAR 465 ++ + + +R L Q+ + Sbjct: 358 IGFVMTVYRKLAASSVAAIRRALYRRLSRLENDVLDEIIQSNFVEDERFQGELEEFTVSS 417 Query: 466 DMLYPERIYQ-------EFEGDNATWWNFDPRVEW-----LMGYLTSHRSQKVLVICAKA 513 D E + N D ++ L L + ++K+L+ Sbjct: 418 DQDSREEFFDGEIELLKLLITRVEKLINHDDKLSRFMDTLLKQLLKDNPNEKILIFSEYR 477 Query: 514 ATALQLEQVLREREGI-RAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNF 572 AT +++ + + G + + H GMS ER F D Q L+ +E G EG N Sbjct: 478 ATQEYIKEAITGQFGEDKVVLLHGGMSHDERRDVIWQF---DNEVQFLISTEAGGEGINL 534 Query: 573 -QFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDA 631 Q MV +DLP+NP L QRIGRL R GQ + + T ++ ++ ++ Sbjct: 535 QQHCHTMVNYDLPWNPMRLVQRIGRLYRYGQQKKVVVLNVNSPGTVDEQIIALMYQRIEQ 594 Query: 632 FEHTCPT--GRTIYDSVYNDL---------INYLASPDQTEGFDDLIKNCREQHEALKAQ 680 G +++ +D+ + + G + + +E E K Sbjct: 595 VVSDMAAVQGDEFNEALKDDILGEVSNLLDLEEILEQASAGGIERTEERIKEALERAKNA 654 Query: 681 LEQGRDRLLEIHSNGGEK-AQALAESIEEQDDDTNLIAFAMNLFDIIGINQ--DDRGDNM 737 RD + E A L + Q ++F + + I D + Sbjct: 655 TNLQRDLFKYVSRYNPEDLANELIITTAHQ------LSFIEGMCKQLNIEIVKRIHDDKV 708 Query: 738 IVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTG 797 + L D ++ G + IT R++A +R+ + L++ + S G Sbjct: 709 LQLRLPDSVMNEL--GTRSSALDITVYRDMARSRKSTVMMDMNASLMQLFVRTACSFSFG 766 Query: 798 SSTISLL 804 T S+ Sbjct: 767 GKTASVC 773 >UniRef50_A0L7C3 Helicase domain protein n=3 Tax=Bacteria RepID=A0L7C3_MAGSM Length = 954 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 163/914 (17%), Positives = 328/914 (35%), Gaps = 79/914 (8%) Query: 55 FNPGDTITSHD-GWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQD 113 F PG I + D W ++ + G + + A+ +D K+ P Sbjct: 11 FAPGARILARDAEWLIRRVDNTSTGGQALKVVGISELVRDKEAIFLTEIDDKIEVLDPAK 70 Query: 114 RLFAGQIDRMDRFALRYRARKYSSEQFRMP------YSGLRGQRTSLIPHQLNIAHDVGR 167 D + R S + P Y+G R +P+QL+ A + Sbjct: 71 TNLVQ--DESSGY--RSSLLYLESLLRQTPPTDERIYTGHRAAM-DAVPYQLDPAIQALQ 125 Query: 168 RHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRF 227 + R+L+AD VGLGKT+EAG+++ + + G +R+L+ +++ Q+ E RF + Sbjct: 126 QPRQRILIADSVGLGKTLEAGILVSELIRRGRGKRILVAAVKSMLTQFQKEFWSRFTIPL 185 Query: 228 ALFDD---ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHH 284 D +R +NPF I S+D ++ + +L A WD++++DEAH+ Sbjct: 186 TRLDSIGLQRIRSRIPTNHNPFHYFDKSIVSIDTLKQDAEYRTYLENAWWDIIIIDEAHN 245 Query: 285 LVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVE 344 + S + + L+ +++L+ATP ES + + +LDP + ++ + Sbjct: 246 VAERGKGASLRSRLAKLLSTRSDTLIMLSATPHDGSAESFASLMNMLDPTAIANPGEYTK 305 Query: 345 EQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELV 404 D + L + D + + E+ I A+ E A Sbjct: 306 ---------DEIQGLFI-RRFKKDIQSQVASAFKERKIATAPCDASPVEEAAFDTLTATR 355 Query: 405 SMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRA 464 +DR + LF+ T ++ L + + I+ ED Sbjct: 356 FAKLDRGKGAGELFKTTL-------EKSLFSSPMACMQTIGNRIRQLEKQENPDLQEDIG 408 Query: 465 RDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLR 524 + E + Q + + G+ + + ++++ + T L + L Sbjct: 409 VLKVLAEEVRQITPEHFTKYQRLVQAIRRDFGWDGKNTADRLVLFTERIETLKFLAEHLP 468 Query: 525 EREGIR---AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQF-ASHMVM 580 ++ + H MS +E+ + F +++ ++L+ S++ SEG N + M+ Sbjct: 469 RDLKLKDKQVEILHGSMSDVEQQQVVEAFGKDEEPVRLLIASDVASEGINLHYLCHRMIH 528 Query: 581 FDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS-----VLVRWYHEGLDAFEHT 635 FD+P++ + +QR GR+DR GQ I ++ + + Sbjct: 529 FDIPWSLMVFQQRNGRIDRYGQEQTPHIVYLTTNSQNDKIRGDMRILELLIQKDEQATKN 588 Query: 636 CPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNG 695 + + T + K + +++ E+ D L I N Sbjct: 589 IGDPAAFMG-----VYDINEEERLTAEAMEASKTPEQFEAERQSKPEEQWDVLSMIMGNT 643 Query: 696 GEKAQALAESIEEQ------DDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVP 749 A +A + + DD L A +L + + +V + L Sbjct: 644 PPPAGEMATDNKARMPALFADDYAYLEAALSHLGENRDLQVRMDAQAKMVEFTAPKELKQ 703 Query: 750 DFPGLSED------GITITFDREVALA-----RED------AQFITWE-HPLIRNGLDLI 791 F L + +++ DR+V R+D ++ WE +P+++ D + Sbjct: 704 RFRFLPREIWPENGQFSLSQDRDVIQQEIKRSRKDENAWPTIHYL-WEQNPMMQWVNDQV 762 Query: 792 LSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNN 851 L+ + N+ L E ++++ P + P + G + Sbjct: 763 LAAFKRHEAPVIWLNQGLGGD----ETVFLMSGLIPNRKGH----PLVHRWFGVGFQGKD 814 Query: 852 LAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEAD 911 + E +T + R + +V + +L + + + + Sbjct: 815 FSEIEELDTLLGRTGLGKRLIPNPMVYMDDFLLKQLLPKAVERARGWMSGQRNDFEDHIN 874 Query: 912 EKLSAELSRLEALR 925 KL+ +L RLE LR Sbjct: 875 PKLNDQLKRLEGLR 888 >UniRef50_Q9KE87 SNF2 helicase n=1 Tax=Bacillus halodurans RepID=Q9KE87_BACHD Length = 577 Score = 341 bits (875), Expect = 7e-92, Method: Composition-based stats. Identities = 130/586 (22%), Positives = 243/586 (41%), Gaps = 48/586 (8%) Query: 116 FAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLL 175 ++ + L+ +++ ++ L P Q A V R +L Sbjct: 14 LTKELSPLKNIKLKLQSQAIQLQKGFDRLICLDEVYLEPRPWQYETAIKVLRDMQGSAIL 73 Query: 176 ADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY 235 ADEVGLGKTIEAG+I+ + L+ G VLI+VP L QW EM +F ++ +E Sbjct: 74 ADEVGLGKTIEAGLIIKELLVRGLINSVLILVPAPLVEQWRDEMNDKFKIQLTDLKEEG- 132 Query: 236 AEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 ++ + L+I S+ + RSK+R E + + +DLLVVDEAH L ++ ++ Sbjct: 133 ----------WEEQNLLISSMPYLVRSKKRQEIINKRTFDLLVVDEAHCL---KNHRTQT 179 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ-------KN 348 Y+ + + ++ LL++ATP Q M F + +L P +F E+ KN Sbjct: 180 YKFVYTIQKN--NTLLMSATPIQNDMRELFNLVNILKPGFLKSRKKFREQFIVNRYTPKN 237 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM 408 + D + ++ ++ S+ + + +I +IE + + + Sbjct: 238 IEALRDLLNKVMIRHRRSDTLVELPRRVIRNVEIE-----LTEIERNFHNGVIDFCRDTY 292 Query: 409 DRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDML 468 ++ + G+ K +H I L L + + + + R Sbjct: 293 KKYMEGDIQI--------GWDKTRVHLIVLILLSLLKQNCSSPQASLSTLRTKMFPRLDG 344 Query: 469 YPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG 528 ++ + +E L L ++ +V T L ++L E + Sbjct: 345 VDKKNCLDLIQLGERITAPSKAIELLK--LLKQSDEQAIVYSEYRVTIDLLSELLEEHD- 401 Query: 529 IRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPD 588 +H +S E+ ++ F ++ AQV + SE G +G N QF ++ FDLP+NP Sbjct: 402 FTVTTYHGRLSSREKQQSIERFKNKE--AQVFISSESGGQGLNLQFCRRLINFDLPWNPM 459 Query: 589 LLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIY----- 643 +EQRIGR+ R GQ +D++I+ + L+ ++ FE TI Sbjct: 460 RIEQRIGRVHRFGQVNDVEIYTMPTKGAIDEYLLYTLTSKVNLFEVVIGELDTILSYMKN 519 Query: 644 --DSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDR 687 +S + + + ++ +++ ++ K +L+Q D+ Sbjct: 520 NDESFELRIGKIILESKNSAEVEEQLRSISDEFLTAKQELDQDVDQ 565 >UniRef50_B9LVT7 Helicase domain protein n=2 Tax=Halobacteriaceae RepID=B9LVT7_HALLT Length = 584 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 142/594 (23%), Positives = 245/594 (41%), Gaps = 71/594 (11%) Query: 112 QDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP 171 RL AGQ D R L L+ HQ++ A+ Sbjct: 38 AVRLQAGQPDSELR-----------------SLKELDENSVKLLEHQVDAAYRALFEMDG 80 Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 + LLADEVGLGKTIE GMIL + E VLI+ P L QW E+ +F L F Sbjct: 81 KALLADEVGLGKTIEVGMILKEMHFRETDESVLILTPAQLAKQWQAELREKFGLDFVCNY 140 Query: 232 DERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA 291 D D + FD +I S+D A+ + R + + + +WD+LV+DEAH++ ++ Sbjct: 141 D--------DEFEDFDAHDYIIASIDTAKSERHR-QTVLDRDWDVLVLDEAHYV---KNE 188 Query: 292 PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRP 351 + Y I++L+ + LTATP Q + + + LL P F F + N Sbjct: 189 ETDRYDLIDRLSYNYAF--FLTATPIQNELTDLYNVVSLLRPGLFGTRDVFHQYFVN--- 243 Query: 352 VADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRH 411 +++ ++ + + ++ + D + + + D Sbjct: 244 ---------------SNQETLVNRDELQDRLNKVMIRNRREETDIDFTDRTIDTRTFDPT 288 Query: 412 GTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE 471 R L++ + VKG ++ + + Q + + + ++ + + Sbjct: 289 PKERELYQAVSDYVKGAYSQDQGQKLVLMLLQKEVVSSPVALKETIEKRLYEQSELTHAD 348 Query: 472 RIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ----KVLVICAKAATALQLEQVLRERE 527 + D + + E L+ + R +V+V AT Q+ L E Sbjct: 349 ELESIL--DLIEDIDTVTKQERLLDIVEEARETVEMGRVIVFTQFRATQRQVLDRLAS-E 405 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNP 587 G FH G S E+++ F EE +L+ ++ SEGRN QF + +V L +NP Sbjct: 406 GYTVHAFHGGHSSSEKEQIVEDFEEEGG---ILVSTDAMSEGRNLQFCNLLVNLGLSWNP 462 Query: 588 DLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIY---- 643 +EQRIGR+ RIGQ D+ + L+ T + ++ + +D F+ + +I Sbjct: 463 MRMEQRIGRVHRIGQKRDVFVFNMALKGTVEEYVLERLYHKIDLFQQSVGELSSILSRLE 522 Query: 644 -------DSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLE 690 D +++ L+N + D FD + + +EQ E L +LE+ + + E Sbjct: 523 ESGTSFEDQIFDRLVNADSEVDLENDFDAMAVDLQEQRE-LADKLEEFNNGVFE 575 >UniRef50_A6L6P1 Putative ATP-dependent helicase n=1 Tax=Bacteroides vulgatus ATCC 8482 RepID=A6L6P1_BACV8 Length = 921 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 176/905 (19%), Positives = 346/905 (38%), Gaps = 116/905 (12%) Query: 132 ARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMIL 191 A + E + +PHQ+ + V + R LLADEVG+GKTIEAG+I+ Sbjct: 61 AARIKEEMAQKRLLAPYESSLIPLPHQILVLEKVMQGIQTRFLLADEVGMGKTIEAGLII 120 Query: 192 HQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAE--------AQHDAY 243 ++ L G +R+L++VP++ QW E+ FN F ++D E + + Sbjct: 121 KEKKLRGELKRILLVVPKSAMLQWQQELKEHFNESFYIYDSEFISGMARTFASFEAEEEL 180 Query: 244 NPFDTEQLVICSLDFARR---------------SKQRLEHLCEAEWDLLVVDEAHHLVWS 288 N + +I S D + +K RLE + A++D+L++DEAH + S Sbjct: 181 NFWKQHNQIIVSTDALKPLIARQGWTQDKIDEYNKYRLEAVVNADFDMLILDEAHRMGGS 240 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 S YQ E L VP VLLL+ATP + + L+L+D + F Sbjct: 241 TALVS-RYQMAETLCNSVPNVLLLSATPHRGKSDHFRRVLQLIDSDAFTGEGT------- 292 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM 408 P + + ++ N ++ ++ + ++D Q A + V+ + Sbjct: 293 --PSIQEIEPYIMRSEKRNAVDYDGKKLFQPRNTVRINVNLDNDQHRLQIALYKHVTEYV 350 Query: 409 D----------RHGTSRVLF-------RNTRNGVKGFPKR--ELHTIKLPLPTQY--QTA 447 R+ T V+ +T + R L + + Y + Sbjct: 351 RYCFGKAKHGNRNATGLVMVMMQKLASSSTAAILSAMQTRLWRLQNGCVDDISNYDEEET 410 Query: 448 IKVSGIMGARKSAEDRARDMLYPERIYQEF--EGDNATWWNFDPRVEWLMGYLTSHRSQ- 504 + + S E + + E E E N + D + L+ + S + + Sbjct: 411 VDFEDLNTEDYSVEYPNANYINEETALAELIAEAQNCIAYEQDAKTTALIQNIYSLQDKY 470 Query: 505 -----KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV 559 K+LV T L + L E+ G + M + ER +A F AQV Sbjct: 471 NDSKLKILVFTEFRKTQAYLNEQL-EKAGFTTVGINGNMDLQERQKALIKFKNN---AQV 526 Query: 560 LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS 619 ++ ++ E N QF + + +DLP+NP +EQRIGR+DRIGQ H + + + + Sbjct: 527 MIATDAAGESLNMQFCNIVFNYDLPWNPMAIEQRIGRVDRIGQKHPVIAYNMLTNNSVDT 586 Query: 620 VLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKA 679 + E LDA + D + L + + D + + + + A ++ Sbjct: 587 RVYEIIVEKLDAILNELGI-----DKSGDVLDSTINMKDVNHLYLQSLLDPKRFEFASES 641 Query: 680 QLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDT----NLIAFAMNLFDIIGINQDDRGD 735 L + R +L + + G + I ++ L + L ++ I+ ++ Sbjct: 642 WLYEIRQKLHDYKATEGLLPAFSEQDIVKESAGEVKYSPLPVWLEELLNLYAIS-ENGKI 700 Query: 736 NMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLD------ 789 N ++ +++ ++ I FD + + +T +HP I+ LD Sbjct: 701 NKLLTGVTEY-------EINGQKINACFDSSSIGFNPECEHLTLQHPYIKRLLDGIDGNS 753 Query: 790 ----LILSGDTGSSTISLLKNKALPVGTLL-VELIYVVEAQAPKQLQLNRFLPPTPVRML 844 +++ G+ L + + Y + A + Sbjct: 754 QKKIPVITSHDGNDINGFLTVWKISAKNNYETKTTYSAQFVADNGKVYAPY--------- 804 Query: 845 LDKNGNNLAAQV--EFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARAL 902 GN++ ++ + F + + + +Q ++HA+ E +IE + +++ Sbjct: 805 ----GNDVWNRLVQTKDAF-EYCGEMPYNLDFDNNSILQNNLHAVFHRMECEIENNLKSI 859 Query: 903 IDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRL 962 + + A + +S++ NIR+ +L ++ R+ + +++ + + + Sbjct: 860 FEK-KVRAIDYSEQRISKIGI-----SNIRNSKLKRLKEERKNWQAAFEKSKSIIPDVTM 913 Query: 963 IVVTH 967 I+ Sbjct: 914 ILTVR 918 >UniRef50_UPI0001BC7C8F helicase domain protein n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC7C8F Length = 1046 Score = 338 bits (868), Expect = 4e-91, Method: Composition-based stats. Identities = 166/853 (19%), Positives = 301/853 (35%), Gaps = 128/853 (15%) Query: 54 MFNPGDTITSHD----GWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFS 109 FN GD + D G ++V + G Y + + E L + S Sbjct: 3 QFNIGDKVLLVDTNAHGVVIKVMPAR--RGRQLYTVNFPSGNQD---VLEADLKADFDES 57 Query: 110 KPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH 169 P +R +G ++ R A K + S L+ +T +Q Sbjct: 58 DPFERCKSGIYGSYSEYSKRNTAFKIKNSN-NSTISSLKASKTLFRAYQFKPLLKFLNSP 116 Query: 170 APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFAL 229 R+L+ADEVGLGKTIEAG I+ + + VLI+ P++LQ +W E+ +F L F + Sbjct: 117 NRRLLVADEVGLGKTIEAGHIMLELKARRELKNVLIVCPKSLQEKWKAELYEKFGLTFKI 176 Query: 230 FDDERYAEAQHDAYNPFDTEQLVICSLDFAR---------------RSKQRLEHLCE--A 272 D+ + A A I + + R R +++L E Sbjct: 177 VDNAKDLIADLQAK---TGTVRAIVNYEKVRMRKRATKDEQRGGEHRYTNLIDYLSENPQ 233 Query: 273 EWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLD 332 + L++ DEAH + + ++ Y+ E + L LTATP + E+ + L LLD Sbjct: 234 RFSLVLCDEAHKM---RNRETQTYKGSEIIMSCADAALFLTATPIMISEENLYNLLHLLD 290 Query: 333 PNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLS-------------------NDELNML 373 +R+ + F+ K RP +A+ +L L N+ + Sbjct: 291 NSRYFNPQIFMNRLKENRPFVEAITLLNHNVPLPTIMEGLLDADVQLTFSADGNEIYSRS 350 Query: 374 GEMIGEQDIEPLLQAANSDSEDAQSAR-QELVSMLMDRHGTSRVLFRNTRNG----VKGF 428 + +P+ Q E + + + + L+ +F TR Sbjct: 351 RHISELYADDPIFQEIKELMEGEDTPKVRARLQYLLSTMSVMNTVFSRTRKREVTTDMSQ 410 Query: 429 PKRELHTIKLPLPTQYQTAIKVS-----------------------GIMGARKSAEDRAR 465 +R+ H K+ L + Q + ++ + + Sbjct: 411 AERKPHARKVVLNPEEQEEFNAVIENYTEDNSYTDYDGEEVLTQGGALGLVQRKRQVASS 470 Query: 466 DMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT---SHRSQKVLVICAKAATALQLEQV 522 Y + G +A D +VE L + ++K++V T L Sbjct: 471 VWGYLNKETDLDRGIDAFESCPDAKVEELQRIIEAVFKSGTKKLVVFALFRRTLKYLHIR 530 Query: 523 LREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFD 582 L+ + G A + H + R F ++ +LL SE+GSEG + QF + MV +D Sbjct: 531 LK-KAGYNALIIHGQV--ENRAEILTQFKKDKN-THILLSSEVGSEGLDMQFCNSMVNYD 586 Query: 583 LPFNPDLLEQRIGRLDRIGQA-HDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT 641 LP+NP ++EQRIGR+DR GQ + I+ + + Q + E + F T Sbjct: 587 LPWNPMVVEQRIGRIDRFGQKAKVVNIYNLVVAGSIQEEIYMRLLERIGIFRGTIGDMEA 646 Query: 642 IYDS---------------VYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRD 686 I D+ + + + ++ E + E + L++G Sbjct: 647 ILDAQVGNTAMTIQDVYNKMEKEFFTKELTREEKEQKIAEVARAIENEKENLQHLQEGLS 706 Query: 687 RLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQ--DDRGDNMIVLTPS- 743 L + ++ + + D L F + ++ ++ Sbjct: 707 NTLTNDAYFRDEINRILYN-NAYVTDEELHNFITSAIRQRLTTCNMEEVEKGVMEFAVPI 765 Query: 744 -------------------DHMLVPDFPGLSED--GITITFDREVALAREDAQFITWEHP 782 ++ V F ++ +TF++E A ++ HP Sbjct: 766 SQPTILKNFLTQYCENTDESNISVNQFKRRIDEQQKFLLTFNQEKAYEDGTLNYLNIYHP 825 Query: 783 LIRNGLDLILSGD 795 +I+ L+ + D Sbjct: 826 MIQACLNYFIEND 838 >UniRef50_D0TGQ7 Helicase domain-containing protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TGQ7_9BACE Length = 932 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 158/909 (17%), Positives = 318/909 (34%), Gaps = 88/909 (9%) Query: 53 VMFNPGDTITSHDGWQMQVEEVKE--ENGLLTYIGTRLDTEESGVALREVFLDSKLVFSK 110 + ++PG I + G + V + G L Y+ + + + + LD+ + Sbjct: 2 INYSPGQRI-TVRGEDFLITNVDRNYDGGHLLYVMGISELVRNHSFIFDTDLDNNIEIVS 60 Query: 111 PQDRLFAGQIDRMDR-FALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH 169 P + D R L S+ F + +G + +Q+ Sbjct: 61 PINAHLVSDEDPRWRKTRLLIETALRSNAYFSQKITVAQGGAFDVAEYQMTPTLKAFELP 120 Query: 170 APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFAL 229 PR+L+AD VGLGKTIE G+ L + + +R+L+ +++ Q+ E+ RF + Sbjct: 121 RPRLLIADGVGLGKTIEVGIFLAEMIRRSRGKRILVCALKSILAQFQEEIWNRFAIPLVR 180 Query: 230 FDDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLV 286 D A+ Q++ NPFD I S+D + + + L + WD++V+DE H + Sbjct: 181 LDSLGVAKIQNEIPLNKNPFDYYDKTIISIDTLKNNGRFRAWLEKTHWDIIVIDECHKVA 240 Query: 287 WSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ 346 + S + LA+ ++L +ATP ES +R+L+P + Sbjct: 241 ---NDSSLRGDLAQFLAQRCDSMILTSATPHNGSAESFANLMRMLEP---------ISIP 288 Query: 347 KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSM 406 +N + + + E++I + + E S Sbjct: 289 RNGEYTKKDILPYYVRRFKHDIADAHIRSQFQEREIRKIEVTLTDEEEQILSKEHTKFRS 348 Query: 407 LMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARD 466 L D+ F+N K + + L T + K + + +A+ R Sbjct: 349 LKDK-------FKNDALFALTVFKSFMSSPIAALGTLEERCKKDNSEELSELTAQVRRLV 401 Query: 467 MLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLRER 526 Y + Y F+ WN +P+ +++++ + AT LE+ + Sbjct: 402 KNYEDSRYDAFKKVLTELWNKNPK-------------ERIVIFTERIATMKYLEERIIRE 448 Query: 527 EGI---RAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ-FASHMVMFD 582 + + F + E++ FA+ED+ V + S+ GS+G N + M +D Sbjct: 449 FKLNKEQVVRFDGSLLDTEQEAMVGNFAKEDSKISVFISSDSGSQGVNLHYYCHIMFNYD 508 Query: 583 LPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS-----VLVRWYHEGLDAFEHTCP 637 +P++ LEQR GR+DR GQ I+ + + ++ T Sbjct: 509 IPWSLITLEQRNGRIDRYGQKQRPVIYYLVNKTNDEGLRSDFTIIDKLLHKEQEVHDTLG 568 Query: 638 TGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEAL-----------KAQLEQGRD 686 ++ + G D+++ + +E+ D Sbjct: 569 DAMSVMELYKAQDEEKAIGDALMTGDTDVVEQTASRRRQRGGFKRADAVVSTPAVERLND 628 Query: 687 RLLE-IHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDH 745 ++ E S + + E + ++ + + + + + +N + Sbjct: 629 KIFEKRFSLYTDDMSYYRDLFAELEATGSIHHGDVTMVEDATVPYVEVKNNEELRDVLYD 688 Query: 746 MLVPDFPGLSEDGITITFD-----REVALAREDA-----QFITWE--HPLIRNGLDLILS 793 + FP ++ +T D R +A +R+ +F+ HP+I L + Sbjct: 689 IPREAFPA--DNIFRLTMDKAWLNRSIAESRKSTNSEWSKFLPLYDIHPIISYLLTKFTA 746 Query: 794 GDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLA 853 S ++N LP G L + L + LDK+G Sbjct: 747 S-LPKSQAMAVRNLELPQGMSYYLFY------GSHGNGLGQNLVSKFFVVPLDKDGALRE 799 Query: 854 AQVEFETFNRQ---LNAVNRHTGSKLVNAVQQDVHAILQLGEAQ----IEKSARALIDAA 906 + F F ++ ++ + K + +Q ++ + G + + ++ Sbjct: 800 RPMSFYDFTQKYPIISKFMQGASEKDIKILQTNLQNAIDEGLVKYMYDAQGKVSTEMEKQ 859 Query: 907 RNEADEKLS 915 KL Sbjct: 860 LKAYKHKLQ 868 >UniRef50_Q18F85 ATP-dependent helicase HepA n=3 Tax=Halobacteriaceae RepID=Q18F85_HALWD Length = 959 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 173/876 (19%), Positives = 316/876 (36%), Gaps = 93/876 (10%) Query: 120 IDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEV 179 I + L RA + S P L+ R +QL R+LLAD+V Sbjct: 67 IGNPEFQQLLNRAYRLSMLHGTAPLMSLQRSRVIPTEYQLTPVVMALDSPRVRMLLADDV 126 Query: 180 GLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF---DDERYA 236 GLGKTIEAG+I + + A+RVL+I P L+ QW F++ + + Sbjct: 127 GLGKTIEAGLITSELMSRNKADRVLVITPANLRDQWREAFNHFFHIESDIISRRHRKAME 186 Query: 237 EAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPS--- 293 + +P+ +I S+D+A++ R E L E +WDL+++DEAH ++ + Sbjct: 187 KQIPPGTSPWAHFSKLIVSIDYAKQDSVRHEILDE-DWDLVIIDEAHKAAKPHESGANES 245 Query: 294 ---REYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLL----------DPNRFHDFA 340 + + ++ +H LLLTATP +S + LR+L DP D A Sbjct: 246 VNMQRWDFATEITDHAEHCLLLTATPHNGYTDSFASLLRMLDVDAVSGPRHDPTIHQDVA 305 Query: 341 QFVEEQKNYRPVADAVAMLLAGN---KLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQ 397 + Q+ V + GN + DE+ ++ E+ + + + + A+ Sbjct: 306 KEHVVQRRRDDVKQWFSDSDGGNPFPERDQDEVRVIPTEYEEETYDAVRKYGDLLMSSAK 365 Query: 398 S--------ARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIK 449 AR ++ L + L R+ N R T + Sbjct: 366 RSGSNNQTLARWSVIHFLKRALSSPEALRRSISNRQDKLRDRLEDLDDEDRQTMIEETAG 425 Query: 450 VSGIMGARKSAED----------------------RARDMLYPERIYQEFEGDNATWWNF 487 +S M + +D RA + + + E + Sbjct: 426 ISESMAQANALDDDPGEEYSEEEVGERVERMVAGNRASIEQELDLLEEVAEKAERVTKSR 485 Query: 488 DPRVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQVLREREGIRAAVF--HEGMSIIER 543 D +++ L+ R Q +V++ T L+ + E +G R VF H ++ +R Sbjct: 486 DAKLQRLLDETLPQRFQYSRVIIFTKYVDTLEYLKDQIEESQGERTDVFTLHGSLNEAQR 545 Query: 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQF-ASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 F E + VL+ +++ SEG N Q A+ ++ ++LP+NP+ LEQR GR+DR GQ Sbjct: 546 KERFNEF--EGSDRAVLIATDVISEGMNLQHAANQIIHYELPWNPNRLEQRNGRIDRYGQ 603 Query: 603 AHD-IQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDL-----INYLAS 656 D + I +E +++ + D + L A Sbjct: 604 EEDEVVIRTMVVEDQMDVAILKTLVKKADQIRRDYGFSPPYFGDDDGILALLEKEGVDAG 663 Query: 657 PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNG------GEKAQALAESIEEQD 710 QT + + ++ E++ A E DR+ G E + E+ + Sbjct: 664 IPQTTLSEFGSQTSADRSESVSAFDEDALDRIKSESFYGHTEVGLEEVQKRKKETHQRIG 723 Query: 711 DDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALA 770 + L F + ++ + + + + S L P + + +TFD + Sbjct: 724 GEGTLEEFVKSALNLFDCDYEVNLKGHLDIEVSSPQLRG--PDIQPEYHDVTFDPDETSQ 781 Query: 771 REDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQL 830 + + + HPL + ++ + G V+ Sbjct: 782 SSNTEMLDIAHPLTQRLIEAVKETAL---------TDEDRYGRTAARGTTKVDEPTAVYT 832 Query: 831 QLNRFLPPT-PVRMLLDK---------NGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAV 880 L R++ T P ++++ + +L+ ++ + V R K V+ Sbjct: 833 ALVRYVAHTEPDSTVMEELVEVGLPVYDSGSLSQELVESVQQSERKPVQRLPHEKRVDLK 892 Query: 881 QQDVHAILQLGEAQIEKSARALIDAARNEADEKLSA 916 H L + R +I R E E + Sbjct: 893 NAIEHDGLDAALDATAEQRRNMIIEERTEMRENIET 928 >UniRef50_D0N059 Chromodomain-helicase-DNA-binding protein, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0N059_PHYIN Length = 2158 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 139/734 (18%), Positives = 253/734 (34%), Gaps = 96/734 (13%) Query: 21 TVVAVDARTVTLLFPSTGENRLY--ARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEEN 78 T++ + V F S +Y VT++ + +G + + Sbjct: 724 TLIGASSHQVLFHFHSPRPAFMYPPYCQAKQVTKLRLEKIPDDAAPEGSKYAQYSYNQFK 783 Query: 79 GLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAG----QIDRMDRFALRYRARK 134 +L D + + + S P L+AG ID + FA R Sbjct: 784 RMLKVGVAEPDVASAASTQTLMQHANYSAPSGPMQHLYAGVVDNSIDPHEHFASFLPERS 843 Query: 135 YSSEQFRMPYS-GLRGQRTSLIPH---------------QLNIAHDVGR--RHAPRVLLA 176 ++ S G G +P+ Q+ + + + +LA Sbjct: 844 NAANSGSHAKSAGSSGDANEFVPYEQSPTYKGGRTLRAYQVEGLNWMVSCIKAQRSCILA 903 Query: 177 DEVGLGKTIEAGMILHQQLLSGAAE-RVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY 235 DE+GLGKT++ ++ + LI+VP + W E+ +L ++ D Sbjct: 904 DEMGLGKTVQIVSLIEHMKSEESIRGPYLIVVPLSTIQHWRREIESWTDLNVCVYHDIGD 963 Query: 236 AEAQHDAY-----------------NPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLV 278 + A N +++ + + + EH+ W L+V Sbjct: 964 RSTKFTAKDMRAVVRDQEWYYPGLGNSIFKFHILLTTFETILADFEEFEHI---HWRLVV 1020 Query: 279 VDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHD 338 VDEAH L + A SR + + L HV +LLT TP Q + + L L+P +F Sbjct: 1021 VDEAHRL---KSAGSRVLKMMRVL--HVDRKVLLTGTPLQNNTQELWVLLNYLEPVKFAS 1075 Query: 339 FAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQS 398 +F +N+ + ++ L+ L + E + E+ I P + S + + Sbjct: 1076 LEEFN---QNFGKLHSQEQVVRLQQLLAPFILRRVKEDV-EKSIPPKEETI--VSVELTT 1129 Query: 399 ARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARK 458 +++ + D++ + L+R T+NG+ L+ I+L L + G+ Sbjct: 1130 LQKQYYRAIYDKNKS--FLYRGTKNGLP-----TLNNIQLQLRKCCNHPFLIKGV----- 1177 Query: 459 SAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQ 518 E+R D L + V L+ L K+L+ Sbjct: 1178 --EERELDELGSNPTPAQVMEKTIECSGKMMLVSKLIPKLKRD-GHKILIFSQFLKQLDL 1234 Query: 519 LEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASH 577 LE+ E R A F+ + + + LL ++ G G N A Sbjct: 1235 LERY-CEANSFVFERLDGSTGGSVRQSAIDRFSRPHSKSFIFLLSTKAGGVGINLIAADT 1293 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP 637 +++FD +NP Q R RIGQ +QI+ T +S + L Sbjct: 1294 VIIFDSDWNPMNDLQAQSRCHRIGQKKSVQIYRLVTRNTYESEMFDRASRKLGLEHAVLG 1353 Query: 638 TGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLE-IHSNGG 696 T F++ + + E L L++G L+E + Sbjct: 1354 TAS----------------------FNENSQITKPSAEQLVELLKRGAYALMEDDDTASK 1391 Query: 697 EKAQALAESIEEQD 710 E A+ E+I +++ Sbjct: 1392 EFAERDIETILKEN 1405 >UniRef50_Q5P8V3 ATP-dependent helicase n=4 Tax=Bacteria RepID=Q5P8V3_AZOSE Length = 980 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 182/977 (18%), Positives = 326/977 (33%), Gaps = 120/977 (12%) Query: 55 FNPGDTITSHDG-WQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQD 113 + PG + D W ++ + + G L + AL L+ + P Sbjct: 4 YAPGARVVIRDEEWLVRRVDPSSDGGHLLNCDGVSELVRGRSALFLTALEDDIKVLDPAR 63 Query: 114 -RLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR 172 L A + L A+ S +L+P+QL+ A ++ R Sbjct: 64 TELVADTSSHFNSTFLYLEAQLRRSTPNDDKIHLGHRAVMNLVPYQLDPALQALKQPRQR 123 Query: 173 VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD 232 +L+AD VGLGKT+EAG++ + + G +R+L++ +++ Q+ E RF++ D Sbjct: 124 ILIADAVGLGKTLEAGILTTELIQRGRGDRILVVTLKSMLTQFQKEFWSRFSIPLVRLDS 183 Query: 233 ---ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHL--VW 287 +R +NPF+ I S+D + + + +L A WD++++DE H++ Sbjct: 184 VGLQRVRNTIPSNHNPFNYYDRSIISIDTLKGNLEYRNYLENAWWDIIIIDECHNVAARA 243 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQK 347 SED SR + LA ++LL+ATP S + + LLDP D + E Sbjct: 244 SEDGMSRRARLARMLAGRSDTMILLSATPHDGSARSFASLMSLLDPTAISDPDDYTPE-- 301 Query: 348 NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSML 407 D L + D + + ++ L Q A+ D E A A L Sbjct: 302 ------DFRNKGLVMRRFKKDIRDQVSADFQDRVTVRLQQDASQDEEFAYMA-------L 348 Query: 408 MDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDM 467 + T R + R + P T ++ + D ++ Sbjct: 349 LAIPFTQRGQAKAGRQQELQRVGMQKAIFSSPAAALDSTLRRIELLKNKDNITGDEEVEV 408 Query: 468 LYPERIYQEFEGDNATWWNFDPRVEWLMGYLT--------SHRSQKVLVICAKAATALQL 519 + +A + + + L+ +L S + ++++ + T L Sbjct: 409 AALQDFANALRRIDAASF---SKFQRLVRHLNSADFAWQPSAPNDRLVIFSERIETLCWL 465 Query: 520 EQVLREREGIR---AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ-FA 575 + L ++ + H GM+ E+ F ++ ++LLCS++ SEG N F Sbjct: 466 AEHLPTATKLKPNQIEILHGGMTDTEQQSIVERFGRKEDPIRLLLCSDVASEGLNLHYFC 525 Query: 576 SHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS-----VLVRWYHEGLD 630 +V FDLP++ + +QR GR+DR GQ H QI + E Q ++ E + Sbjct: 526 HRLVHFDLPWSLMVFQQRNGRVDRYGQTHQPQIIYLFTETRIQRVKGDLRILEILQEKDE 585 Query: 631 AFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLE 690 + + + EG + E ++G D LL+ Sbjct: 586 QANRNLGDPASFLHIYDPEKEAEKVAEIMAEGTTPEVFEATLDAEQPTTSEDEG-DWLLD 644 Query: 691 IHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPD 750 + +N E ++ + E D G ++ + + + H L Sbjct: 645 LFAN-PEGPDSVVAAPEPSTAHIRAGLTLFGT-DAKGTSKPPLSSDYLFAKTALHQLSQP 702 Query: 751 FP----GLSEDGITITF----------------------DR-----------------EV 767 P + G T+T R Sbjct: 703 TPLAQFSTDDTGQTVTLTAPLDLQERLRLTLPTEVRDANHRYTLCAHTARMAQAIEEARQ 762 Query: 768 ALARED----AQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGT---------- 813 A A E+ ++ +HP++ D +L+ G +++ L G Sbjct: 763 ANAEEESWPALHYLWPQHPIMDWLADRVLTA-FGRHCAPVIQCPQLADGEHAFILMGLIP 821 Query: 814 ------LLVELIYVV-EAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLN 866 LLVE + A L F L N +E L Sbjct: 822 NRKGQPLLVEWQVAIGHAGNAGGWTLQPFPDFVARSALKAGTLPNRGQSIETTPLQAVLP 881 Query: 867 AVNRHTGSKLVNAVQ---QDVHAILQLGEAQIEKSARALIDAARNEADEKLSAEL----- 918 L+ + D+ L A +E+ + AE Sbjct: 882 GAVDTMKRHLITQQKSFSADMQQRLAGTLADLERLQGRQFEQLELRLAANQQAEQFKKSR 941 Query: 919 --SRLEALRAVNPNIRD 933 R + +R V R Sbjct: 942 REQRTQQIRKVFDEYRQ 958 >UniRef50_A7AJJ3 Putative uncharacterized protein n=2 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AJJ3_9PORP Length = 949 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 173/898 (19%), Positives = 334/898 (37%), Gaps = 125/898 (13%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRH-APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLI 205 L + + PHQ+ A + + +LADEVGLGKTIEAG+IL + R++I Sbjct: 33 LSEAKVDMNPHQVEAALFAFKSPLSKGAILADEVGLGKTIEAGIILSELWAEHK-RRIII 91 Query: 206 IVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF-DTEQLVICSLDFARRSKQ 264 +VP +L++QW +E++ +F L + ++E Y E + N F D ++ICS +FA + + Sbjct: 92 VVPASLRNQWNLELMEKFYLPSVILENESYKEIKELDTNLFEDGRHIIICSYNFAIKHSE 151 Query: 265 RLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESH 324 L+ + +WDL+V DEAH + + + +H +LLTATP Q ++ Sbjct: 152 ELQLV---DWDLVVFDEAHKMRNVYKKGNIIGNTMMNTFKHYK-KILLTATPLQNNLKEL 207 Query: 325 FARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEP 384 + + ++DP+ F F E+ N D+ +LS+ L + + E Sbjct: 208 YGLISIIDPHFFSTVDSFNEQY-NMITTRDSAKFGELKGRLSHIVHRTLRQQVKEYVNYT 266 Query: 385 LLQAANSDSEDAQSARQ--ELVSMLMDRHGT-------SRVLFRNTRN-----------G 424 A + E + Q E +S + R GT +L R Sbjct: 267 KRTAFVQEYEASPEEVQLYENISEYLQRPGTYGIPEKVRPMLSLIVRKIMSSSAYALSFT 326 Query: 425 VKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE------------R 472 ++ F +R H K+ + + +D + L P R Sbjct: 327 LQRFVERLEH-YKVTGELLSAMSTVENDYEVTLDEEKDEINEGLNPAISDAIDLEIAELR 385 Query: 473 IYQEFEGDNATWWNFDPRVEWLMGYLTSHR----SQKVLVICAKAATALQLEQVLREREG 528 +YQE + L + +K L+ T L+ L + G Sbjct: 386 MYQEQAKSIVNETKAKQLLVALEKTFHKNEMLGAPKKALIFTESRRTQEYLKSFL-QNNG 444 Query: 529 IR--AAVFHE-------------------------GMSIIERDRA-AAWFAEEDTGAQVL 560 + F+ G +II+R +A F + A+++ Sbjct: 445 YKEKVVCFNGSNNDDDSKSIYRKWLSLYAGSKRISGRTIIDRKQALVDHFRTD---AEIM 501 Query: 561 LCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLE-KTAQS 619 + +E G+EG N QF S +V +D+P+NP +EQRIGR R GQ D+ + + A Sbjct: 502 IATESGAEGINLQFCSLLVNYDMPWNPQRIEQRIGRCHRYGQKFDVVVVNFVNQLNYADC 561 Query: 620 VLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKA 679 + +E + FE + + S+ + D + + + + CR + E Sbjct: 562 RVYELLNEKFNLFEGVFGSSDEVLGSLE-------SGVDFEKKLNHIYQTCRTERE---- 610 Query: 680 QLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGD---- 735 +E ++L + + + + + + L F + D + I Q + D Sbjct: 611 -IEAAFNQL-------QSELEEIIQQRIKDTKKSLLENFDEEVVDKLKIRQSEDRDRVNS 662 Query: 736 -NMIVLTPSDHMLVPDFPGLSEDGIT----ITFDREVAL-------AREDAQFITWEHPL 783 N + +L + ++ +T ++ + D + HPL Sbjct: 663 YNRHFWRLAKSVLKDLITDIDDENLTFVLPVSLKSNIPSGTYILNKDHGDFHQLRVTHPL 722 Query: 784 IRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRM 843 + L ++I + L +L+E Y ++ ++ + Sbjct: 723 GEYIISRALETPVPDASI-EFEVDNLSSRQVLLE-KYKGKSGVAVVYKVKAYNELDSHEH 780 Query: 844 LLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALI 903 LL + + + + + A + + V++ + E+ L Sbjct: 781 LLFCSKTDDGENLSPDFLKKLFEANAINESKWFGDNVEEQLTESY-------EQQLYDLK 833 Query: 904 DAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESL---DQAGWRLD 958 + ++E +S E+ + +A ++E+ A+ + + + A +L+ Sbjct: 834 HDVYSRSEEYVSFEIDKYQAWAEDQVYSPENEVIALRKEDEALKRQIRKERNAKLKLE 891 >UniRef50_C5DA36 Helicase domain protein n=4 Tax=Bacillaceae RepID=C5DA36_GEOSW Length = 1062 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 186/902 (20%), Positives = 336/902 (37%), Gaps = 101/902 (11%) Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAH-DVGRRHAPRVLLADEVGLGKTIEA 187 R ++ ++ L Q +PHQ+ + + R + R LLAD+ G GKTI A Sbjct: 74 YLRYFEFVVDKRFSKTRALGNQHLIPLPHQIEAVYGRMLRVPSVRFLLADDPGAGKTIMA 133 Query: 188 GMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD 247 GM++ + +A R+LI+VP + QW E+ +FN F + R ++ NPF Sbjct: 134 GMLIQELKARQSANRILILVPPLVLKQWQQELKEKFNEDFLIVT--RSTLNEYSGKNPFV 191 Query: 248 TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA-------PSREYQAIE 300 VI SL +A R + + EA++DL++VDEAH + ++ YQ E Sbjct: 192 ENDCVITSLYWAARD-DVRDLVIEADFDLVIVDEAHKMAAYTSGVKKKKTKRTKLYQLGE 250 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFA-----QFVEEQKNYRPVADA 355 + H LLLTATP + +E+ +RL+DP+ F + R + + Sbjct: 251 IILRHSDHCLLLTATPHKGDVENFRHLMRLIDPDIFSSIGIKETLRDKTNPFIIRRLKEH 310 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQE------LVSMLMD 409 + + + EQ+++ E A ML+ Sbjct: 311 LKYFDGTPLFPKRTTKTITYHLSEQELKLYEAVTQYVKEHFNRAINRGNNSTAFAMMLLQ 370 Query: 410 R---------HGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAI------------ 448 R H + + + N ++ ++++ + L +Y+ A Sbjct: 371 RRLSSSIEAIHLSLKRRYHRLMNLLEEAKQKQVIPSEEILVDEYEEATLEEQEIFEMKSE 430 Query: 449 -KVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVL 507 V I A E L Y G W + + + G L + +K+L Sbjct: 431 TCVDAIDLAELELEIEELKKLIAYSGYLREHGVERKWMELEKTLFGVEGLL--QKGEKIL 488 Query: 508 VICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGS 567 + T LE+ LR G+ A S+ ER + F E ++L ++ G Sbjct: 489 IFTESTDTLHYLEKKLRAH-GVEVAKIIGKFSMEERRKQVERFKHE---CPIMLATDAGG 544 Query: 568 EGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHE 627 E N QF + M+ +D+P+NP+ LEQR+GR+ RIGQ +++ + T + ++ Sbjct: 545 ESINLQFCNQMINYDIPWNPNKLEQRMGRIHRIGQRNEVFVFNLVAGNTREGDVLLTLMT 604 Query: 628 GLDAFEHTCPTGRTIYDSVYNDLINYLA--------SPDQTEGFDDLIKNCREQHEALKA 679 ++ +YD + + L + +A + Q E +D+ K+ E A Sbjct: 605 KMEQMRKDLGH-DLVYDFIGDRLEDKVADLPTLMQQAILQRERLEDIKKSIDEVLAEEYA 663 Query: 680 QLEQ--GRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQ-DDRGDN 736 L + +RL + + + ++ FA+N + + ++ Sbjct: 664 DLLKIAKEERLAVETIDLPGMKREQYDLAVQKIPARAYAQFAINTLSRHRVKVYSSQNNH 723 Query: 737 MIVLTPSDHMLVP-------DFPGLSEDGITITFDREVAL-AREDAQFITWEHPLIRNGL 788 + + + G E+ T ++A A E+ + +HPL L Sbjct: 724 VFRIDRMPKFIREFARKHHISLKG-KEESYRFT---DIAKYANEEVALMKNDHPLFAVSL 779 Query: 789 DLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR-----M 843 L+ G + + K L+VE Y + +L R + R + Sbjct: 780 QLMKEEIEGLV-LPFFEAKIPIREALMVEA-YEIGLTDGTGRELFRDIVYFARRKNGEII 837 Query: 844 LLDK---NGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR 900 +D G +L V + + + H +K++ ++ V + E Sbjct: 838 EIDSYWLYGYSL-ELVSLHPIEQNESTLLAHALNKVMQKREELVLS--------NEAQLN 888 Query: 901 ALIDAARNEADEKLSAELSRLEALRAVNPNIRDD--------ELTAIESNRQQVMESLDQ 952 I R D + + RLE R N R+ +L IE RQ +E +++ Sbjct: 889 KKIQFLRRAFDHQYQETVFRLEKYRRENDANRNSALINQMKAKLVDIEERRQARLEEIER 948 Query: 953 AG 954 Sbjct: 949 ER 950 >UniRef50_B8HYW4 Helicase domain protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HYW4_CYAP4 Length = 894 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 163/744 (21%), Positives = 288/744 (38%), Gaps = 76/744 (10%) Query: 130 YRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGM 189 R+ + + +S R L+PHQL + V R R L+AD+VGLGKTIEAG+ Sbjct: 66 LRSLAATIDSLNDRWSVFSRSRVKLLPHQLWVCRKVLERWPFRWLIADDVGLGKTIEAGL 125 Query: 190 ILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTE 249 IL + RVLI+ P +L QW++ + F+LRF + EA ++T Sbjct: 126 ILWPLISRRIVHRVLILAPASLVEQWVLRLREMFDLRFTPYT----TEADTPRNGFWETH 181 Query: 250 QLVICSLDFARRSKQRLEH--LCEAEWDLLVVDEAHHLVWSE-DAPSREYQAIEQL--AE 304 V+ SL R ++ L WDL+++DEAHHL E + + ++ +++L + Sbjct: 182 NQVVASLQTLRDDRRGRHDRLLASPPWDLIIIDEAHHLNADEVNGITLSFKLVQKLHEFQ 241 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ----------KNYRPVAD 354 + ++ T TP + S + L+LL P+ + D Q +E+ N + V D Sbjct: 242 KLKSIVFFTGTPHRGKDYSFLSLLKLLRPDVYEDPKQPLEKYLSSLRDVMIRNNKQNVTD 301 Query: 355 AVAMLL-------AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSML 407 LL A + E + + + +E A++ D + ++ +++ L Sbjct: 302 LNGRLLFNGIETQAVTYYYSTEEACFYDTLTQFILEGYAYASSLDGIEGRAV-NLVLTAL 360 Query: 408 MDRHGTSRVLFRN-TRNGVKGFPKRELHTIKLPLPTQYQTAI-----------KVSGIMG 455 +S R+ + +K ++ ++L Q I + Sbjct: 361 QKLASSSVAAVRSALQKRLKSLKSKQKELVQLKALRQQLKTILNQIDTNDGSEDEVSALD 420 Query: 456 ARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQK-VLVICAKAA 514 R A ++ E Y + + + R+ ++ L +++ VL A Sbjct: 421 ERIIELSVALSLMENEEEYLAKLVNLSNAITSETRIRRILDLLKGDFAERSVLFFTEYKA 480 Query: 515 TALQLEQVLREREGIRAAVF----------HEGMSIIERDRAAAWFAEEDTGAQVLLCSE 564 T L L + G A F + R+RA F E + A+ L+ +E Sbjct: 481 TQSLLINALIQHYGETAVTFINGDQEVHNVNGRTIRCPRERAIQLFNEGE--ARFLVSTE 538 Query: 565 IGSEGRNFQF-ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVR 623 EG + Q ++ D+P+NP L QR+GRL R GQ H +++ T ++ + Sbjct: 539 AAGEGVDLQQNCHTLIHVDIPWNPMRLHQRVGRLYRYGQTHKVEVVTLRNPDTIEATIWE 598 Query: 624 WYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEAL------ 677 E + + + ++ ++ + TE F + RE + Sbjct: 599 RLEEKMQRIQLALSGVMEESEDLFPIVLGMTSPSVWTELFSEAPTVPRETLNSWFDGKTA 658 Query: 678 ----KAQLEQGRDRLLEIHSNG-GEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDD 732 + L+ RD + S E A L E D L F + Sbjct: 659 RFGGQDALQTVRDLVGHCASFDYRELAGQLLEV-----DLPALRPFFTGMLMHNHRQARF 713 Query: 733 RGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLIL 792 D + TP + P + G+ FDR A + + + HPL+ L+ Sbjct: 714 TEDGLSFRTPEGWSGIGIKP--NYSGLV--FDRNFRGADAEQRILGIGHPLLDRALEQAR 769 Query: 793 SGDTGSSTISLLKNKALPVGTLLV 816 S + T +LL ++ LP +L+ Sbjct: 770 SLEE---TAALLPSELLPYPLVLL 790 >UniRef50_C9ZFV2 Putative helicase SNF2 family protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZFV2_STRSW Length = 1001 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 154/742 (20%), Positives = 263/742 (35%), Gaps = 107/742 (14%) Query: 128 LRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTI 185 LR A S + + S L +P+Q A PR+L+AD VGLGKT+ Sbjct: 106 LRRTALPQSERRLALADSFLM----DPLPYQRRPAELALSGANLRPRLLIADVVGLGKTL 161 Query: 186 EAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD---ERYAEAQHDA 242 E G+ L + + G ER+L++ P+ + Q+ E+ RF + D ER Sbjct: 162 EIGLTLAELIRRGRGERILVVTPQHVLEQFQHELWTRFAIPLVRLDSVGIERIQREIPAG 221 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 NPF + + VI S+D + + Q HL + WD +V+DE+H+L+ + S Q L Sbjct: 222 RNPFTSFKRVIVSIDTLKNTDQYRHHLEQIRWDAVVIDESHNLI---NRGSLRNQLARTL 278 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 A ++L +ATP +S + LLDP D + AD + + Sbjct: 279 APRTDALILASATPHNGDAKSFAELIGLLDPVAIRDPENYR--------AADIEHLFIRR 330 Query: 363 NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR 422 K+S + + ++ + +E+ +EL ++ + G + V Sbjct: 331 TKISPEVREQMKGQWADRGPSHSVHCPAGPAEE--KIFEELAAVWLPADGGTSVC----- 383 Query: 423 NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNA 482 V FP L + T + + A ++ +Y+ E Sbjct: 384 -SVPLFPYTLLKSFLSSHAALRATVSARIRTLEKKNEPRGTAAEL---AALYRLSELAAD 439 Query: 483 TWWNFDPRVEWLMGYLTSH------RSQKVLVICAKAATALQLEQVLREREGIR------ 530 + L+ L Q+V+V + T L QVL G + Sbjct: 440 LTEADSAKFAALVRQLREEIGVGPGSDQRVVVFSERVQTLEWLAQVLPAALGFKGRAARD 499 Query: 531 -AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQF-ASHMVMFDLPFNPD 588 V H G+S ++ F DT +VLL ++ SEG N +V +D+P++ Sbjct: 500 CVRVMHGGLSDEQQMACVEEFGLADTPVRVLLTGDVASEGVNLHRQCHQLVHYDVPWSLI 559 Query: 589 LLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ-----SVLVRWYHEGLDAFEHTCPTGRTIY 643 +EQR GR+DR GQA + L + +V+ E D + T + Sbjct: 560 RIEQRNGRIDRYGQARPPEFRALILTSEVEGAKDDTVVAERLLEREDQAHRSLGTAEAVT 619 Query: 644 DSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALA 703 + D G + + + + G D L + A Sbjct: 620 GLYRAEAEEKSLIQDLLRG--RTVDESLDARRSDADGEDAGLDDFLADFFGPVGEEAPPA 677 Query: 704 ESIEEQDD--------------------------------DTNLIAFAMNLFDIIGINQD 731 E+ E D D L + + + +++D Sbjct: 678 EATESADSVPTGTSGTGASAGRTGASPVLPRLFDSTAHFLDDALREVYPDARERLDLDRD 737 Query: 732 DRGDNMIVLTPSDHMLVPDFPGLS---------EDGITITFDREVAL-----ARE----- 772 + ++ P LV L + + +TF+R +A ARE Sbjct: 738 QQS-GLLSFRPPTE-LVHRLKALPMDYLREQRLRERMLVTFNRRLAEHSLQRARESSTSS 795 Query: 773 --DAQFITWEHPLIRNGLDLIL 792 + +T HP++ D +L Sbjct: 796 WPEISLLTDLHPVVEWLTDKVL 817 >UniRef50_A6NWV9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NWV9_9BACE Length = 943 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 131/648 (20%), Positives = 232/648 (35%), Gaps = 83/648 (12%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH-APRVLLADEVGL 181 ++ +K + L + PHQ+ A + A +++ADEVGL Sbjct: 6 HAKYYANLLTQKALGGELDSLSQSLLNATVDINPHQIEAALFAFKSPLAKGLIMADEVGL 65 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEAG+++ Q +G +++++ P +L+ QW E+ +F + + D + Y E Sbjct: 66 GKTIEAGLVMCQYWSTGK-HKIIVVCPASLRKQWSFELTEKFGIPNEILDSKNYNEYIRS 124 Query: 242 AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 NPF ++VICS FA R ++E + +DL ++DEAH L ++ AI++ Sbjct: 125 GKNPFSQRKIVICSYYFAAR---KMEEIRLCGFDLAIIDEAHKLRNVYKKNAKTAHAIKE 181 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML-- 359 LLLTATP Q + + ++D N F D F E + D L Sbjct: 182 ALADAK-KLLLTATPFQNSLMELYGLTSIIDENIFGDSRSFRSEYVTEGNITDLRMRLAP 240 Query: 360 -------------------------LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSE 394 L D N + E + D+ + + + Sbjct: 241 YYKRTLRKDVTEYINYTKRLPLTQKFDATDLEQDLYNAVSEFLRRDDLYSVPRRQQMLTT 300 Query: 395 DAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIM 454 R+ L S GT + ++ ++L Sbjct: 301 MI--IRKILASSTYALLGTLEAVKARLSKMLEDETVKQLSITDWIDVEDMGILEDGEDEE 358 Query: 455 GARKSAEDRARDMLYPERIYQ-EFEGDNATWWNFDPRVEWLMGYLTS--------HRSQK 505 G S E + I + D A D + + L+ L ++K Sbjct: 359 GEETSDEQKINKAKLKAEIDTIQSFIDMAKQIRCDSKAKSLLSALEKAFAQLPSLGANRK 418 Query: 506 VLVICAKAATALQLEQVLREREGI--RAAVFHEGMSIIE--------------------- 542 L+ T L+ L E+ G + +F+ S E Sbjct: 419 ALIFTESTRTQKYLKDFL-EQNGYQGKIVLFNGSNSDKESNAIYNAWAERNAYTGRLSGI 477 Query: 543 -----RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL 597 R +F + A+V++ +E +EG N QF S +V +DLP+NP +EQRIGR Sbjct: 478 KAADRRAALVDYFRDT---AEVMIATEAAAEGLNLQFCSLVVNYDLPWNPQRIEQRIGRC 534 Query: 598 DRIGQAHDIQIHVPYLEKT-AQSVLVRWYHEGLDAFEHTCPTGRTIYDS-----VYNDLI 651 R GQ D+ + ++ A + E F+ + + Sbjct: 535 HRYGQKSDVVVVNFINQRNFADMRVFSLLSEKFKLFDDVFGASDEVLGQTDGVDFERRIW 594 Query: 652 NYLASPDQTEGFDDLIKNCR-EQHEALKAQLEQGRDRLLEIHSNGGEK 698 + + + + E ++ +L++ + ++LE ++ Sbjct: 595 EIYQQCRTEDEIEAAFAKLQDDMQEEIEDRLDEVKQQVLENFDIDVQE 642 >UniRef50_D1P919 Helicase n=1 Tax=Prevotella copri DSM 18205 RepID=D1P919_9BACT Length = 966 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 183/930 (19%), Positives = 323/930 (34%), Gaps = 160/930 (17%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRH-APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLI 205 L R L PHQ+ A + + V+LADEVGLGKTIEAG+++ Q + R+LI Sbjct: 35 LSEARVDLNPHQVMAALFAFQSPFSKGVILADEVGLGKTIEAGIVISQ-FWAERKRRILI 93 Query: 206 IVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQR 265 + P TL+ QW +E+ +F L + + ++ H + D +Q+ ICS FA R + Sbjct: 94 VAPATLRRQWSMELEEKFFLDSFILEKKKGISLDHLS----DGKQIYICSYQFASR---Q 146 Query: 266 LEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHF 325 E L WDL+V DEAH L A ++ A LLLTATP Q +E + Sbjct: 147 AEILSRTHWDLVVYDEAHKLRNVYKATPSMASRLKS-AFSDSHKLLLTATPLQNNIEELY 205 Query: 326 ARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE------ 379 + ++D + F D F + Y D +A +L L + + E Sbjct: 206 GLVSIIDDHYFGDLKSFKAQY-CYSNKNDDIAFGDLRRRLRPIVHRTLRKQVTEYVKYTS 264 Query: 380 ---------------QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN--TR 422 + + + D Q + L+ R S F T Sbjct: 265 RIPMAQEYYPAVEEQKLYNQISEYLRRDDTYGLPTSQRQLITLIFRKLMSSSTFAIGYTL 324 Query: 423 NGVKGFPKRELHTIKLPLPTQY-----QTAIKVSGIMGARKSAEDRARDMLYPERIYQEF 477 + + ++ P + + A+ ++G + + I Sbjct: 325 KTLIDRLQTKIAPYSADKPQGWYGEDGKIAMVAEDMLGDDWDEWNEQDENEQEGEILTSD 384 Query: 478 E--------------GDNATWWNFDPRVEWLMGYLTSH--------RSQKVLVICAKAAT 515 E D A + + + + L+ L + ++K L+ A T Sbjct: 385 EIEGIKDEIKELQRLYDLANSISSNKKGDCLLSALHTGFQKMEELGANRKALIFTESART 444 Query: 516 ALQLEQVLRE---------------------------REGIRAAVFHEGMSIIERDRAAA 548 L L+Q+L E I + F +S +R Sbjct: 445 QLYLKQLLEENGYMGKIVLFNGSNNDETSRKIYKAWKERNIGTSAFTPSLSANKRQAIVD 504 Query: 549 WFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 +F +E A++++ +E SEG N QF S +V +DLP+NP +EQRIGR R GQ +D+ + Sbjct: 505 YFRDE---AEIMIATEAASEGINLQFCSLIVNYDLPWNPQRVEQRIGRCHRYGQKNDVVV 561 Query: 609 HVPYLE-KTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYN---------DLINYLASPD 658 + A + + E F+ + + S+ + ++ +P+ Sbjct: 562 FNFINKANAADVRVFQLLSEKFHLFDGVFGSSDEVLGSIESGVDFEKRMLNIYQQCRTPE 621 Query: 659 QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF 718 + DLI+ +E ++KA ++ R +LLE + + L I + D NL F Sbjct: 622 EINAAFDLIQ--QEMDASIKATMQDTRKQLLE--NFDEDVVGLL--KIRQGKDMGNLNKF 675 Query: 719 -------AMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAR 771 + + D + + L + + V G+ + T + R Sbjct: 676 HRWLWTITIATLGKENVEVVDETNLVFRLKHNPYPDVAAECGMYQ---ITTLQSQYINYR 732 Query: 772 EDAQFITWEHPLIRNGLDLILSGDTG-----------SSTISLLKNKALPVGTL---LV- 816 HPL + + L + ++ ++ A G L LV Sbjct: 733 -------LSHPLAQKVIALCKQNEQSLQNLLFDYSLYRYKVADIEQCAYESGWLQAHLVS 785 Query: 817 -------ELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVN 869 E V+ A A L + + + GN + + + Sbjct: 786 FISEGQQEQHIVLTALAEDGTALGQEFAEKLLNVPTISTGNVRVQEEASQKLASLYDNRR 845 Query: 870 RHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDA---------ARNEADEKLSAELSR 920 ++ + + A + E E L + + + Sbjct: 846 AALTVQIEERNKALLDAEIHHIEKWAEDQQLTLENELKDIKAKIKEKKRLLSRSENAQQT 905 Query: 921 LEALRAVNPNIRD-----DELTAIESNRQQ 945 L + +N R E+ +E ++ Sbjct: 906 LTLEKELNTLTRQQKRKRAEIFNLEDEIEE 935 >UniRef50_C4Q1A8 Expressed protein n=1 Tax=Schistosoma mansoni RepID=C4Q1A8_SCHMA Length = 3580 Score = 331 bits (849), Expect = 7e-89, Method: Composition-based stats. Identities = 103/567 (18%), Positives = 192/567 (33%), Gaps = 52/567 (9%) Query: 147 LRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVL 204 + L +Q+ + + H +LADE+GLGKT+++ L + + L Sbjct: 1164 VYKNNNKLRDYQVEGVNWLTFCWYHHRNCILADEMGLGKTVQSVTFLLEIFKANVEGPFL 1223 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD-------------TEQL 251 IIVP + W E + ++ + + Y F + Sbjct: 1224 IIVPLSTVGNWQREFENWSDFNVIIYHGSSVSRSMIQEYEMFYRKRTSGAPRHDIYKFHV 1283 Query: 252 VICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLL 311 ++ + + +E + W V+DEAH L ++ + + + L + +L Sbjct: 1284 IVTTFEVLMND---IEFFGQIHWAAAVIDEAHRL---KNKKCKLGEGLRYL--DLDHRVL 1335 Query: 312 LTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR--PVADAVAMLLAGNKLSNDE 369 LT TP Q +E F L L+P +F A FV E + + + +L L + Sbjct: 1336 LTGTPLQNNVEELFGLLNFLEPEKFSCSATFVAEYGELKTEEQVERLKTVLKPMMLRRLK 1395 Query: 370 LNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFP 429 ++ + +++ ++ N + ++ + S L T N N Sbjct: 1396 EDVEKSLAPKEETVVEVELTNIQKKYYRAIMERNFSFLCKGSST------NAPN------ 1443 Query: 430 KRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDP 489 L I + L + G A S + L + + T Sbjct: 1444 ---LMNIMMELRKCCNHPFLIKGAEDAILSEFQANDNTLSEDDL------TFRTMVYASG 1494 Query: 490 RVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAA 547 ++ + L R KVL+ LE L +G + + R A Sbjct: 1495 KLVLIHKLLPKLRADGHKVLIFSQMIRVLDILEDYLV-HQGFQFERIDGRIHGPLRQEAI 1553 Query: 548 AWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 F+ + LLC++ G G N A ++++D +NP Q R RIGQ ++ Sbjct: 1554 DRFSIDPDKFVFLLCTKAGGLGINLTAADVVIIYDSDWNPQNDLQAQARCHRIGQQKMVK 1613 Query: 608 IHVPYLEKTAQSVLVRWYHEGLD---AFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFD 664 ++ T + + L A + + + I L Sbjct: 1614 VYRLITRNTYEREMFDRASLKLGLDRAVLQSMGSKEARQAQMTKKEIEDLLKKGAYGALM 1673 Query: 665 DLIKNCREQHEALKAQLEQGRDRLLEI 691 D K + E Q+ Q R R++++ Sbjct: 1674 DDDKAGEDFCEEDIDQILQSRARVVQL 1700 >UniRef50_A6DRD5 Putative ATP-dependent helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DRD5_9BACT Length = 956 Score = 331 bits (849), Expect = 7e-89, Method: Composition-based stats. Identities = 130/643 (20%), Positives = 257/643 (39%), Gaps = 50/643 (7%) Query: 55 FNPGDTITSHDGWQMQVEEVKEE-NGLLTYIGTRLDTEESGVALR-EVFLDSKLVFSKPQ 112 G I + G + +V + +G + G + + + +D + P Sbjct: 5 LVEGARIGTR-GEDFLITKVNDNFDGTYLIDAEGISELVKGKSFKFDTNIDKDIEVLDPA 63 Query: 113 DRLFAGQIDR-MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP 171 D + L + S + + + +Q + R P Sbjct: 64 KTTLVADTDYGYRKTKLFLETQLRHSTNYSEKITIAHKAAFNNADYQFDPTIKAFRLPRP 123 Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 R+L+AD VGLGKTIE G+ L + + G +R++++ +++ Q+ E+ RF + D Sbjct: 124 RMLIADGVGLGKTIEVGIFLSEMMKRGKGKRIMVLALKSVLGQFQQEIWNRFAIPLVRLD 183 Query: 232 DERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 + A+ + + NPF+ I S+D + + + H+ +++WD++V+DE H + Sbjct: 184 SQGIAQIKSELPANKNPFEYYDKTIVSIDTLKNNAKFRHHIEKSKWDIIVIDECHTVS-- 241 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 ++ S+ + LA ++L +ATP ES + +++P ++ +E+ + Sbjct: 242 -NSSSQRGSLAQFLATRCESLILTSATPHNGKKESFANLINMIEPTAIPKNGEYSQEEVD 300 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQEL-VSML 407 V +L SN E++I P+ + ED +Q++ +S L Sbjct: 301 PYYVRRFKQDILDEEVKSN---------FQEREIVPIHAELYQEEEDFLEVQQKIKISAL 351 Query: 408 MDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRAR-- 465 T+ L+ N K F ++ + L Y ++ + ++ A+ AR Sbjct: 352 ESLEKTTEDLWGN-----KDFVGKKDFLFSIGLFKGYMSSPSAALSSLKKRVAKIEARQA 406 Query: 466 ---------DMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAA 514 ++L E ++ +D L+ S R ++++V + Sbjct: 407 ENNLAENNTELLNDLIEKIEVIVNDKKDAKYDAFKNELIKLKWSGRKKDERIVVFAERID 466 Query: 515 TALQLEQVLREREGI---RAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRN 571 T LE+ L+E + VFH G + E+ F ++D+ +VL+ S+ GS+G N Sbjct: 467 TIGYLEKRLQEDFNVADKAVQVFHGGQTDTEQQAIIDDFGKKDSDIRVLITSDAGSQGVN 526 Query: 572 FQF-ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS-----VLVRWY 625 F + M +D+P++ LEQR GR+DR GQ+ I+ + ++ Sbjct: 527 LHFYCNRMFNYDIPWSLITLEQRNGRIDRYGQSKTPYIYYMIAKSDLDGLKTDLHIIENL 586 Query: 626 HEGLDAFEHTCPTGRTI---YDSVYNDLINYLASPDQTEGFDD 665 + + T + YD+ + A D E F + Sbjct: 587 TKKEEEVYRTLGDAGAVMKLYDTNSEEDKVKEAMADSNEDFFE 629 >UniRef50_O61845 Temporarily assigned gene name protein 192 (Fragment) n=5 Tax=root RepID=O61845_CAEEL Length = 2963 Score = 331 bits (848), Expect = 9e-89, Method: Composition-based stats. Identities = 123/661 (18%), Positives = 233/661 (35%), Gaps = 59/661 (8%) Query: 128 LRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTI 185 +R + R E +M S + SL +Q + +A +LADE+GLGKT+ Sbjct: 1167 IREKQRPEPEEWKKMSTSKVWKNGNSLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTV 1226 Query: 186 EAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNP 245 + L + G L++VP + W+ E ++ ++ YA Y Sbjct: 1227 QTITFLSRIYDYGIHGPFLVVVPLSTIQNWVREFETWTDMNAIVYHGSAYAREVLQQYEV 1286 Query: 246 FDTEQL---------------VICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 F ++ +I + + +E L + W + V+DEAH L ++ Sbjct: 1287 FYDKRHCGAKNWKKNFVKIDALITTFETVVSD---VEFLKKIPWRVCVIDEAHRL---KN 1340 Query: 291 APSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR 350 + LA + +LLT TP Q ++ F+ L L P +F + A F+E+ Sbjct: 1341 RNCKLLVNG-LLAFRMEHRVLLTGTPLQNNIDELFSLLNFLHPQQFDNSATFLEQF---- 1395 Query: 351 PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDR 410 G+ ++D++ L E++ + L + + E+ M + Sbjct: 1396 -----------GSCQTDDQVQKLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQK 1444 Query: 411 HGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP 470 +L RN + KG L + + L ++G A + + +P Sbjct: 1445 KFYRAILERNFSHLCKGTSAPSLMNVMMELRKCCNHPFLINGAEEAIMND----FRLAHP 1500 Query: 471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREG 528 + + E + +V + L R KVL+ LE+ L Sbjct: 1501 D--WDEETLAHKALIQASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMS- 1557 Query: 529 IRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNP 587 + R A F++E++ V LLC+ G G N A +++FD +NP Sbjct: 1558 YPFERIDGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNP 1617 Query: 588 DLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDS-- 645 Q R RIGQ ++++ T + + L + + + Sbjct: 1618 QNDLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKAEGT 1677 Query: 646 --VYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE-QGRDRLLEIHSNGGEKAQAL 702 D+ L D+ ++ + E ++ L+ + + LE G A+A Sbjct: 1678 ALSKKDVEELLKKGAYGSIMDEENESSKFNEEDIETILQRRTQTITLEAGQKGSLFAKAT 1737 Query: 703 AESIEEQDDDTNL--IAFAMNLFDIIGINQDDRG---DNMIVLTPSDHMLVPDFPGLSED 757 S + DD ++ F + ++ + D ++ F ++ Sbjct: 1738 FNSSHNKGDDIDIDDPEFWTKWAEKAQVDVEKATATPDGRELIIEEPRKRTKRFEENKDE 1797 Query: 758 G 758 G Sbjct: 1798 G 1798 >UniRef50_Q2J9F3 Helicase-like n=3 Tax=Actinomycetales RepID=Q2J9F3_FRASC Length = 1165 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 210/1010 (20%), Positives = 359/1010 (35%), Gaps = 140/1010 (13%) Query: 80 LLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSS-- 137 + + + EV +++ S + G D R A A ++S+ Sbjct: 134 VTLQSVEDGRYGHTVEVIWEVEPGRRVLPSGSLPDVTRGGFDPPGRLAAFLDAVRWSAVT 193 Query: 138 ----EQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQ 193 + + P+ ++ +QL +LLAD+VGLGKTIEAG++ + Sbjct: 194 SADARRLQAPFR----SGVAVEDYQLEPVARALAAPRVNLLLADDVGLGKTIEAGLVAEE 249 Query: 194 QLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD---AYNPFDTEQ 250 LL A R++I+ P L +W EM +F F + D ER A + A NPF+ Sbjct: 250 LLLRHRARRIMIVCPAGLTLKWRDEMAEKFGRDFTIIDAERCAAVRRSHGSAANPFEVYP 309 Query: 251 LVICSLDFAR--RSKQRLEHLCEAE--------WDLLVVDEAHHLVWSEDAP-----SRE 295 L I SL + R ++++ L+ + + +DLL++DEAHH+ + S++ Sbjct: 310 LTIVSLPWLRGPKAQRLLDEVLPGDGQPTYPRTFDLLILDEAHHIAPAAPRQVYAVDSQQ 369 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 + I +LA H L L+ATP + S A L +LD RF + + V Sbjct: 370 TKLIRRLAPHFTHRLFLSATPHNGYLASFTALLEILDDQRFARGVEPDRMAVDEVVVRRL 429 Query: 356 VAMLLAGNKLSNDELNMLGEMI-----GEQDIEPLL------QAANSDSEDAQSARQELV 404 + + + +M GE++I LL + A DS + A + Sbjct: 430 KSSIENADGTPRFPRRRSIDMPVVYPDGEREIHGLLKEFAALRRARLDSPRGRKATDLVT 489 Query: 405 SMLMDRHGTSRVLFRNT----RNGVKGFPKRELHTIKLP-----------LPTQYQTAIK 449 +L R +S F +T R + R +H +L +P + Sbjct: 490 LLLKKRLFSSPAAFGHTVGVYRETLVSRHGRPVHASRLADEAEPGMPGPGMPEPWMEDYF 549 Query: 450 VSGIMGARKSAEDRARDML-------------YPERIYQEFEGDNATWWNFDPRVEWLMG 496 + D D L E + + +A D + L+ Sbjct: 550 DDVATLDDEQLADAEDDALGRIGPMQLDPTDGEIELLDRMRRWADAHEAEPDAKARALLD 609 Query: 497 YLTS--------HRSQKVLVICAKAATALQLEQVLRER--EGIRAAVFHEGMSIIERDRA 546 YL + ++V+V T + L +LR+ G R + H G+S+ ER++ Sbjct: 610 YLNAVCRPDGRHWFDERVVVFTEYRDTQIWLAGLLRQEGLAGERLGLLHGGLSVDEREQL 669 Query: 547 AAWFAEEDT--GAQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 F E + +VLL ++ SEG + Q +V +D+PFNP+ LEQRIGR+DR GQ Sbjct: 670 RLAFQAEPSEHPMRVLLATDAASEGIDLQNHCHRLVNYDIPFNPNKLEQRIGRIDRYGQR 729 Query: 604 HDIQIHVPYLEK---TAQ--SVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 +I + + + + ++ + + + + Sbjct: 730 RSPEIRHFVGSGWSGSVDSFEADLEFLSRVVKKVAQMKADLGSVNAVLSDRVQRRMLGER 789 Query: 659 QTEGFDDL----------------IKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQAL 702 G DDL +N REQ L+A L+ D + E+ + + Sbjct: 790 IDLGPDDLDVGPGGSVAAGGTVPVAENVREQVRRLRANLD---DTVRELGITPAAVRRVV 846 Query: 703 AESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIV---LTPSDHMLVPDFP-GLSEDG 758 ++ L + G+ ++ + D P G Sbjct: 847 GTAL-SLARQQALTPYVDEKEHAEGLFTVPTLTGSWQRASAGLTEKLRREDLPPGTPPRQ 905 Query: 759 ITITFDREVALAREDAQFITWEHPLIRNGLDLILS----GDTGSSTISLLKNKALPVGTL 814 ITFD +A R+D H L+ L+ D G ++ +++ + Sbjct: 906 RPITFDSAMAKDRDDVVLAHLGHRLVDMSTRLLRGAVSNADVGLHRVTAVRSDDPRCEEV 965 Query: 815 LVELIYVVEAQAPKQLQL--------------NRFLPPTPVRMLLDKNGNNLAAQVE--- 857 L+ ++L RF + +L D G LAA Sbjct: 966 LIGAFSRFVLVGADGVRLHEEVLYAGGWAPATGRFRRLENLTVLGDLVGTALAAGRPVSG 1025 Query: 858 --FETFNRQLNAVNRHTGSKL---VNAVQQDVHAILQLGEAQIEKSARALIDAARNEADE 912 E + AV S L Q+ + +L A E ++D Sbjct: 1026 ETRERLAERWPAVRPGVLSALEWRTRTRQESLTRLLGQRRAAEENRITTILDQFAATLRG 1085 Query: 913 KLSAELSRLEALRAVNPNIRD-DELTAIESNRQQVMESLDQAGWRLDALR 961 + + +AL + R +EL +RQ + LD RLD R Sbjct: 1086 AIEDPENDEDALFSRFEIARSREELAQYRKDRQAWQDRLD----RLDQER 1131 >UniRef50_Q8TD26 Chromodomain-helicase-DNA-binding protein 6 n=30 Tax=Euteleostomi RepID=CHD6_HUMAN Length = 2715 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 108/592 (18%), Positives = 197/592 (33%), Gaps = 51/592 (8%) Query: 130 YRARKYSSEQFRMPYSGLRGQR-----TSLIPHQLNIAHDVGRRHAPR--VLLADEVGLG 182 K+ + L R L +QL + + R +LADE+GLG Sbjct: 432 LPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLG 491 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTI++ L + L G LII P + W E + ++ + + Sbjct: 492 KTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQ 551 Query: 243 Y---------NPFD---TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 Y NP +VI + + L+ + W +++DEAH L ++ Sbjct: 552 YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKI---HWSCVIIDEAHRL---KN 605 Query: 291 APSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR 350 + + ++ +A + +LLT TP Q +E F+ L L+P++F F+EE + + Sbjct: 606 RNCKLLEGLKLMA--LEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDLK 663 Query: 351 PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDR 410 + + L L L + + E+++ P + + + +++ ++++ Sbjct: 664 TEEQVKKL---QSILKPMMLRRLKDDV-EKNLAPKQETIIEV--ELTNIQKKYYRAILEK 717 Query: 411 HGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP 470 + F G L + L ++G + P Sbjct: 718 N------FSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAP 771 Query: 471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIR 530 + Q D + L+ KVL+ LE L +R Sbjct: 772 DFQLQAMIQAAGKLVLIDKLLPKLIA-----GGHKVLIFSQMVRCLDILEDYLIQRR-YT 825 Query: 531 AAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDL 589 + R A F + D+ V LLC+ G G N A ++FD +NP Sbjct: 826 YERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQN 885 Query: 590 LEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP-----TGRTIYD 644 Q R RIGQ+ ++++ + + + L + G Sbjct: 886 DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQ 945 Query: 645 SVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGG 696 + + L D + E Q+ Q R + I S G Sbjct: 946 QLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGK 997 >UniRef50_C9RHU2 Helicase domain protein n=1 Tax=Methanocaldococcus vulcanius M7 RepID=C9RHU2_METVM Length = 994 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 114/604 (18%), Positives = 246/604 (40%), Gaps = 61/604 (10%) Query: 152 TSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 HQ+++ ++ R L+ADE+GLGKTIE+ I L +++L++ P+ L Sbjct: 34 IKPFIHQIHLLYNAMLLRPVRFLIADEIGLGKTIESLAIARYLELKEGIKKILVLTPKIL 93 Query: 212 QHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCE 271 + QW E+ R + + D + + +I S+D A+R ++ + + Sbjct: 94 REQWEAEIKRVGGIPRIIKDGNDINNIKSSLQ--YYDSVYIIISIDLAKR---YVDKILQ 148 Query: 272 AEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLL 331 +WDL++VDEAH++ ++ + +E+L++ V +LLL+ATP + + + RL+LL Sbjct: 149 IDWDLVIVDEAHNIT----KNTQRGKLVEKLSKKVRNMLLLSATPHRGDPQDYLYRLKLL 204 Query: 332 DPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLG--EMIGEQDIEPLLQAA 389 DP DF + + Q Y D + + + +N LG + + ++ Sbjct: 205 DPTLIDDFDK-LNTQNFYSKTHDILVF-----RRTKKLVNALGTKRVFKDCKFNAVVVDL 258 Query: 390 NSDSEDAQSARQELVSMLMD---RHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQT 446 + + + + +E + ++ R+ +L K + T+ + T Sbjct: 259 SEEEKRFFTLLEETLKNILKNTKRNSPISLLAVILGKRASSSYKAAIETLNRIIKTNILK 318 Query: 447 AIKVSGIMGARKSAEDRARDMLYPE-------------------------RIYQEFEGDN 481 + + +M + + + Sbjct: 319 TDDIDVSEDIQNLFSLSFEEMEFEDYMEISDIINNIVDKYSPYLNKEQKNLFENLLKTTT 378 Query: 482 ATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEG-- 537 D +++ L + H ++K++V T L++ L + Sbjct: 379 NIIVKKDSKIDALAKIIAEHIRNNEKIVVFTEYVDTLKYLQENLPKYLDNYGINIDTNEI 438 Query: 538 --MSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIG 595 +S ++ + + ++LL +++ SEG N Q AS ++ +D P++P LEQRIG Sbjct: 439 LTLSGENKNLLENINKKFEDCGKILLATDVASEGLNLQIASVLINYDSPWSPIKLEQRIG 498 Query: 596 RLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGL----DAFEHTCPTGRTIYDSVYNDLI 651 R+ R+GQ D+ ++ +L L+ ++ + +A ++ G+ IY + +L Sbjct: 499 RVWRLGQEKDVSVYNIFLSNRMDLELLNNLYKKIMNIKNALDNQLAIGKEIYIANAENLF 558 Query: 652 NYLA------SPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAES 705 N + ++ N + E + L+ R++L ++ E+A+ + + Sbjct: 559 NLEEFAYIKNLSEYDIIISAIVGNLGDYTEEIVRTLKIIRNKLKMMNIFPEERAEEIKKE 618 Query: 706 IEEQ 709 + + Sbjct: 619 VLKL 622 >UniRef50_B9XSE7 SNF2-related protein n=1 Tax=bacterium Ellin514 RepID=B9XSE7_9BACT Length = 819 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 144/580 (24%), Positives = 221/580 (38%), Gaps = 51/580 (8%) Query: 117 AGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLA 176 A + +DRF LR RA + L R + +QL A V R LL+ Sbjct: 271 AFPLTSLDRFFLRERAALWWVSNQSDDLLCLPHCRIERLEYQLRTALRVLGPLRGRALLS 330 Query: 177 DEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA 236 DEVGLGKTIEAG+IL + L G +R L++ +L QW E+ +F L Sbjct: 331 DEVGLGKTIEAGLILKELLTRGMVKRFLVLTVPSLVDQWEEELADKFGLATV---TSNQT 387 Query: 237 EAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREY 296 A+++ N + ++ SL ++ LE + WD+LVVDEAH+L + S+ + Sbjct: 388 SARNEPQNFWRENPGIVASLHTLKQPAH-LEIARQVSWDILVVDEAHYL---RNRESQAW 443 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVA--- 353 QA+ L +LLLTATP Q +E + + LL P + +F N + Sbjct: 444 QAVNALPRQF--LLLLTATPVQNSLEELYNLVTLLQPGQLPSPKEFRARFVNPKRPRQPR 501 Query: 354 --DAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRH 411 + + LL + N N ++ + L ++ Q EL L Sbjct: 502 EPEELRRLLGQIMIRNTRANAGLKLPPRRAETVLFTPDETERAFWQQWESELRVQLARLT 561 Query: 412 GTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE 471 L+ R L P ++ A+ Sbjct: 562 PGQSNLW-----------GRLLLQTAGSSPAAWRAALG--------------KFPAAAAA 596 Query: 472 RIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRA 531 R ++E +W + L +H V++ T L + LR + Sbjct: 597 RAWRELAPLETSWRRKCELIPPL-----THGEGGVVIFTQFLETQAALAEFLRA-ANVAT 650 Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLE 591 V + ER F LL + G+EGRN QF+ +V FDLP+NP +E Sbjct: 651 FVINGATPAPERHPITEEFRRRGGA---LLLTHSGTEGRNLQFSHRLVNFDLPWNPMEIE 707 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI 651 QRIGRL R+GQ + I+ T Q L+ E L+ FE + ++ Sbjct: 708 QRIGRLHRLGQQRPVHIYNLVYAGTLQEQLLEILQEKLNLFEVVVGETGLVLGERFSSDE 767 Query: 652 NYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEI 691 + + + E L +L RD +EI Sbjct: 768 FAEEVFRRWRENEGRVA---EAMAGLGDELAAARDAFIEI 804 >UniRef50_A0LQ13 Helicase domain protein n=5 Tax=Bacteria RepID=A0LQ13_SYNFM Length = 1058 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 186/932 (19%), Positives = 347/932 (37%), Gaps = 132/932 (14%) Query: 121 DRMDRF--ALRYRARKYSSEQF-RMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLAD 177 DR++ F A+R+ A + F + P+ ++ +QL+ +L+AD Sbjct: 95 DRLEAFLDAVRWGAVTNADRSFLQSPFR----SGITIEDYQLDPLVRAVEMARVNLLIAD 150 Query: 178 EVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDE---R 234 +VGLGKTIEAG+++ + L+ A V ++ P +LQ +W EM +F L F + D E R Sbjct: 151 DVGLGKTIEAGLVIQELLVRHRARTVFVVCPASLQVKWQTEMQEKFGLEFRIVDTEYIKR 210 Query: 235 YAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEA---------EWDLLVVDEAHHL 285 + NP+ + ++ S+D+ +S + L + ++D+LVVDEAH++ Sbjct: 211 LRRERGIHVNPWTSYPRLVTSMDW-MKSGEGFRLLKDVLPPHITYPRKFDILVVDEAHNV 269 Query: 286 VWSEDA----PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQ 341 + + S+ + + LA H L L+ATP ES + L LLD RF Sbjct: 270 APASASMYALESQRTRLVRSLAPHFTHRLFLSATPHNGYQESFTSLLELLDDQRFARTVM 329 Query: 342 FVEEQKNYRPVADAVAMLLAGN-----KLSNDELNMLGEMIGEQDIEPLLQAANSDSEDA 396 E+Q + V + ++ N + E + E+ I LL +D + Sbjct: 330 PDEKQLHRVMVRRLKSDIVDANGTPVFPVRKLEGLEIDYAEEERQIHALLGKYTADRSKS 389 Query: 397 QSARQ-----ELVSMLMDRHGTSR------VLFRNTRNGVKGFPK--------RELHTIK 437 + + V ML+ + S L ++ +G PK R L Sbjct: 390 VKGTRFEYGTDFVHMLLKKRLFSSPMAFALTLAKHRDTLERGKPKGDRDTMDDRILRKAI 449 Query: 438 LPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWW------NFDPRV 491 L +Y S + A+ A + ++ P Q D + W D + Sbjct: 450 LKTEEEY---SDDSLVEEAQHEAVEVVGELAPPLSREQRDMLDRLSAWGEKARNRVDSKA 506 Query: 492 EWLMGYLTSH-------RSQKVLVICAKAATALQLEQVLRER--EGIRAAVFHEGMSIIE 542 + ++ +L SH ++V++ AT L Q+L G R H M E Sbjct: 507 KAILDWLESHLKTDGRWNGKRVILFTEYRATHSWLHQILTANGYGGDRLMYLHGSMLPDE 566 Query: 543 RDRAAAWFAEED--TGAQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDR 599 R+ A F + ++LL ++ SEG + Q ++++ ++P+NP+++EQR GR+DR Sbjct: 567 RESVKAAFQAHPDISPVRILLATDAASEGIDLQNHCNYLIHVEIPWNPNVMEQRNGRIDR 626 Query: 600 IGQAHD-IQIHVPYLEK---------------TAQSVLVRWYHEGLDAFEHTCPTGRTIY 643 GQ D + I P + + +D + + Sbjct: 627 HGQKEDSVFIWHPVGKGFSARSADRSVKPGDVAGDHEYLMRAVLKIDTIREDLGSVGPVI 686 Query: 644 DSVYNDLI---NYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 + + E + + L+ ++ + +RL+E ++ + Sbjct: 687 ARQIEEAMLGRRSGLDTASAEAKAAKARKFVTAEKRLQERIARLHERLMEAKNDFHLSPE 746 Query: 701 ALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGL------ 754 ++ ++ + L G ++G VP PG Sbjct: 747 HISRAV-----EVALDLAEKPSLKPTGSTHGEKG---------SVFEVPVLPGSWGRATV 792 Query: 755 ----SEDGIT--ITFDREVALAREDAQFITWEHPLIRNGLDLILSG--------DTGSST 800 G+ ITFD +VA R+D H L++ L L+ Sbjct: 793 GLEHPHTGVRRPITFDHDVAKGRDDVVLAHLNHRLVQMCLRLLREEIWKLDDVKRLHRVA 852 Query: 801 ISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFET 860 + + + L V + V V+ +L L + K ++ + E Sbjct: 853 VRTVPDSELRVPAVAVWSRLVITGGDHHRLHEELTLAGGELEH---KRFARISQVGKLEA 909 Query: 861 FNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSR 920 Q + + L + ++ A +E +R + N D ++ +E++ Sbjct: 910 LVAQGSPIEPDQA--LFDVLKDRFERHEDALMAAVEARSRDRLKFLENTLDRRMKSEIAD 967 Query: 921 LEA-LRAVNPNIRDDELTAIESNRQQVMESLD 951 + L + +IR + ++S+RQ L Sbjct: 968 VRTVLDELEASIRKE----LKSDRQGGQLYLP 995 >UniRef50_A8L3E6 Helicase domain protein n=2 Tax=Actinomycetales RepID=A8L3E6_FRASN Length = 1046 Score = 328 bits (840), Expect = 9e-88, Method: Composition-based stats. Identities = 136/613 (22%), Positives = 230/613 (37%), Gaps = 38/613 (6%) Query: 54 MFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQD 113 F PG + D + + +G + + A LD + + Sbjct: 3 TFAPGSIVVVRDEEWLVTGAEQGTDGWRLDVVGLGELVRETTATFFSGLDHIELLDPREA 62 Query: 114 RLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSL---IPHQLNIAHDVGR--R 168 L R R L A + L L + +Q Sbjct: 63 ELLPDGSPRHRRTRLWLEA-TLRRTPMPAGETSLTVSDGMLATHLDYQRRAVAHALSPTN 121 Query: 169 HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFA 228 PRVL+AD VGLGKT+E GM+L + G A+RVL++ P + Q E+ RF L Sbjct: 122 LRPRVLIADAVGLGKTLEIGMLLAELTRRGRADRVLVVTPRHVLEQMQHELWCRFGLPLV 181 Query: 229 LFDDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHL 285 D + + + + NPF + +I S+D + S + L WD++V+DE+H+L Sbjct: 182 RLDSDGLQRVRQNLPASRNPFTFYRRIIVSIDTLK-SPRYRSFLERHRWDVVVIDESHNL 240 Query: 286 VWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEE 345 + + + LA + ++L +ATP ES LRLLDP ++ Sbjct: 241 T---NTGTLNNELARVLAPNTEALVLASATPHNGKKESFAELLRLLDPTAVGPDGEY--- 294 Query: 346 QKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVS 405 VAD + + ++ S + +G + ++ A S +EDA + E+ Sbjct: 295 -----DVADVERLFIRRHRHSPEVAAEVGADWALRPEPVVIPVAASPAEDAIAT--EISR 347 Query: 406 MLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRAR 465 + G S V R + K L + L T +++ G + Sbjct: 348 TWLYPQGPSPVAGRGSALFPWTLAKASLSSPAALLETTEARLKRLASRSGGGAGERNGGG 407 Query: 466 DMLYPERIYQEFEG-DNATWWNFDPRVEWLMGYLTSH-----RSQKVLVICAKAATALQL 519 D R + ++ L YL + + + ++ + AT L Sbjct: 408 DHELERRALERLRDLTELALAGESAKLTALAEYLRTIGVGARSATRAVLFAERVATLRWL 467 Query: 520 EQVLREREGI---RAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQF-A 575 L ER G+ + AV H G+ +E++R F + ++L+ ++ SEG N Sbjct: 468 ASELPERLGLAKDQIAVMHGGLPDVEQERIVDDFKTTASPVRLLITGDVASEGVNLHAQC 527 Query: 576 SHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS-----VLVRWYHEGLD 630 H+V D+P++ +EQR GR+DR GQ H QI L + +++ Sbjct: 528 HHLVHVDIPWSLIRIEQRNGRIDRYGQKHPPQIAALALVPSDDRFSGDVRVLQRLLAKEH 587 Query: 631 AFEHTCPTGRTIY 643 T T+ Sbjct: 588 LAHTTLGDAATLM 600 >UniRef50_Q3MDI7 SNF2-related Helicase n=2 Tax=Cyanobacteria RepID=Q3MDI7_ANAVT Length = 1082 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 183/1001 (18%), Positives = 336/1001 (33%), Gaps = 145/1001 (14%) Query: 74 VKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRAR 133 VKE+ + E L E +D+K++ + + D F+ Sbjct: 27 VKEDTLVCLSCLEDDALGEQLEVLWEREVDAKVIGKTSWESIANRGFDNPRLFSAYLHTL 86 Query: 134 KYSSEQFRMP--YSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMIL 191 +++ P + + +QL + +AD+VGLGKTIEAG+IL Sbjct: 87 RWNCVTSTDPKLFQAPYRAGIEVKAYQLEPLRKALLMPRVALFIADDVGLGKTIEAGLIL 146 Query: 192 HQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD---AYNPFDT 248 + L+ RVLI P ++ QW EM RF L F +FD E A + + NP+ T Sbjct: 147 REMLMRQKVRRVLISCPPSVVRQWQEEMESRFGLTFVIFDREFVASRRQERGYGINPWTT 206 Query: 249 EQLVICSLDFARRSKQRLEHLCEAEWD-----LLVVDEAHHLVWSEDAP----SREYQAI 299 I S R + L + D +L++DEAH+ + A S+ + + Sbjct: 207 HSRFIISHALL-RDETYAAPLRDWLGDFTGASMLILDEAHNAAPASGAKYAVDSQLTRTV 265 Query: 300 EQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF-------HDFAQFVEEQKNYRPV 352 +A L L+ATP S A L +LDP RF + + Sbjct: 266 RDIAPRFEHKLFLSATPHNGHSNSFAALLEILDPQRFCRGVPVRDSKLLDTVMVRRLKQD 325 Query: 353 ADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSED--------AQSARQELV 404 + ++ ++ L E E + LLQ S E+ Q+A ++ Sbjct: 326 LREIGEEFPERRVIPIVIDNLPEDAPELKLSRLLQEYRSLREERLKEASKSTQNAAMLVI 385 Query: 405 SMLMDRHGTSRVLFRNT---------RNGVKGFPKRELHTIKLPLP-----------TQY 444 + L R +S F T + V + L P + Sbjct: 386 TSLQKRLLSSIEAFARTLKVHRAAIEKQSVNRSANAIENLPLLLEPPGADDERAELAEEE 445 Query: 445 QTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRS- 503 A + + +M A A E + + + N + DPRVE L+ ++ + Sbjct: 446 VQAEEDTQVMVATGQAASFGLSSRELEILEEMTDVANQARYQADPRVEKLVAWIKQNLCP 505 Query: 504 -----------QKVLVICAKAATALQLEQVLRE---------------REGIRAAVFHEG 537 ++V++ T L+Q L+E R R VFH G Sbjct: 506 DLGKPNAAWLEKRVIIFTEYTDTKRYLQQKLQEAIAGSDKERDSEALRRNAERIDVFHGG 565 Query: 538 MSIIERDRAAAWFAEED--TGAQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRI 594 + R+ F + ++L+ ++ EG N Q + + FD+P+NP +EQR Sbjct: 566 IGEERREAIKNAFNADPLRHPLRILIATDAAREGVNLQNNCADLFHFDVPWNPSRMEQRN 625 Query: 595 GRLDRIGQAHD-IQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINY 653 GR+DR Q + + L + + +++ + + + T + + L+ Sbjct: 626 GRIDRKLQRSPIVHCYYFVLAQRTEDKVLKVLVKKTETIQKELGTLSPVVQKNLSRLLEG 685 Query: 654 LASPDQTEGFDDLIKNCREQHEAL-KAQLEQGRDRLLEIHSNGGEKAQALAESIEEQD-D 711 +Q I+ + + +LE+ R R E+ + + L S + Sbjct: 686 GIRHNQLTNITASIEQADLPNLQIVNEELEENRLRREELTKQLSQLQEMLKTSRDWLGLS 745 Query: 712 DTNLIAFAMNLFDIIGINQ----------DDRGDNMIVLTPSDHMLVPDFPGLSED---- 757 D + +I+G D L P D P + + Sbjct: 746 DEHFRNAISASLEILGATPLTPVNSNEACQDSATARWTLPPLDQRADPTWANTLDTLRPP 805 Query: 758 ---GITITFDREVALARE-----------DAQFITWEHPLIRNGLDL-----ILSGDTGS 798 G R A R D + EH +++ L L + Sbjct: 806 RKKGQKPWEWRREAAIRPVVFRDPGSLDGDVVHLHLEHRVVQRLLGRFLAQGFLHDELTR 865 Query: 799 STISLLKNK---ALPVGTLLV----------ELIYVVEAQAPKQLQLNRFLPPTPVRMLL 845 + + L + L +G L V E+I + + + + L P L Sbjct: 866 ACVCLTDDPIPKVLALGRLSVYGQGASRLHDEVIAIAAEWSDPAARGRKKLQP------L 919 Query: 846 DKNGNN-----LAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR 900 ++ + L + + V + + + + +++ + Sbjct: 920 NEGEKDNVLALLEDSLASPRLQKASQTVKELLKQNATQDIADLIPHLERRANILAQRAEK 979 Query: 901 ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIES 941 L + + EA E+ ++ + + R E+ ++ Sbjct: 980 KLTERGKKEAV-----EMKKILEQQQQRISQRKQEIENTKA 1015 >UniRef50_UPI000180D3C0 PREDICTED: similar to chromodomain helicase DNA binding protein 7 n=1 Tax=Ciona intestinalis RepID=UPI000180D3C0 Length = 4218 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 109/622 (17%), Positives = 212/622 (34%), Gaps = 61/622 (9%) Query: 151 RTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVP 208 L +Q + + +LADE+GLGKTI++ L + G L++ P Sbjct: 1580 NNRLRDYQFEGINWLLFNWYNKRNCILADEMGLGKTIQSITFLQKIFDHGIRGPFLVVAP 1639 Query: 209 ETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTE------------QLVICSL 256 + W E + ++ + + Y F + VI + Sbjct: 1640 LSTIANWQREFESWTTINAVVYHGSQTSRDMLHTYEWFCRDENLDEIPGCYKVHAVITTY 1699 Query: 257 DFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATP 316 + HL + +W L++DEAH L ++ + +++ + + +LLT TP Sbjct: 1700 EMIVLDT---PHLRDVDWRCLIIDEAHRL---KNLSCKLVESLRFM--QLEHKVLLTGTP 1751 Query: 317 EQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEM 376 Q +E FA L L P F+ F E N + +N ++ L E+ Sbjct: 1752 LQNNVEELFALLSFLQPETFNCQQAFSLEFGNLK---------------NNTQVEKLQEL 1796 Query: 377 IGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTI 436 + +L+ D E + + +QE + ++ + +R F + Sbjct: 1797 LK----PMMLRRLKEDVEKSLAPKQETIIE-VELTSIQKKYYRAILERNFEFLAKGTTGG 1851 Query: 437 KLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMG 496 + P T +++ + ++ R+ + ++ + Sbjct: 1852 NV--PNLMNTMMELRKCCNHPYLIKGAEDKIMQEHRVMSNEQNPLQAMIQSSGKLVLIDK 1909 Query: 497 YLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEED 554 L + KVL+ LE L +R + ER A F+ + Sbjct: 1910 LLPRLKQGGHKVLIFSQMVRVLDILEDYLVQRSYF-YERIDGCIRGNERQMAIDRFSRKG 1968 Query: 555 TGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYL 613 + V LLC+ G G N A +++FD +NP Q R RIGQ ++I+ Sbjct: 1969 SDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQQKPVKIYRLIT 2028 Query: 614 EKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQ 673 + + + L + + D + + L G I + Sbjct: 2029 RNSYEREMFDKASLKLGLDKAVLQSISGRQDQITSQLSKTEVEDLLKRGAYGAIMD---D 2085 Query: 674 HEALKAQLEQGRDRLLEIHSN-----GGEKAQ-----ALAESIEEQDDDTNLIAFAMNLF 723 +A E+ D++L+ ++ GEK + ++++ D + F Sbjct: 2086 DDAASKFCEEDIDQILDRRAHTVTLESGEKGSTFSKASFVSNVDQSDISLDDPNFWEKWA 2145 Query: 724 DIIGINQDDRGDNMIVLTPSDH 745 ++ DN ++L H Sbjct: 2146 KKADLDLQQLKDNKLILEIPRH 2167 >UniRef50_A1BHU0 Helicase domain protein n=5 Tax=Bacteria RepID=A1BHU0_CHLPD Length = 967 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 145/683 (21%), Positives = 257/683 (37%), Gaps = 99/683 (14%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH-APRVLLADEVGL 181 ++ R +++ + L+ L PHQ+ A + + LLADEVGL Sbjct: 9 HAQYYAYELTRSRTADDQDKFTASLQDATVDLNPHQVEAALFAFKSPLSKGALLADEVGL 68 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEAG+IL Q+ ++LII P L+ QW E+ +F L + + + + + Sbjct: 69 GKTIEAGIILSQKWAE-RKRKLLIIAPANLRKQWNQELADKFFLPSTIIEAKSFNQIIRS 127 Query: 242 A-YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 NPF+ +++ICS FAR + L H+ +WDL+++DEAH L ++ ++I+ Sbjct: 128 GNLNPFEQNEILICSYQFARAKETWLRHI---QWDLVIIDEAHRLRNVYRPDNKIGKSIK 184 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ------KNYRPVAD 354 H +LLTATP Q + + + ++D F D F + Y + + Sbjct: 185 SALAHTQ-KVLLTATPLQNSLLELYGLVSIIDDYTFGDLKSFKTNYARIGGNEQYNDLKE 243 Query: 355 AVAML----LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDR 410 + + L L ++ E Q D D + + R Sbjct: 244 RLKPVCKRTLRRQVLEYISFTNRLAIVEEFYPYQEEQQLYDDVSDYLRSDKLYALPASQR 303 Query: 411 HGTS---RVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARD- 466 H + R L ++ ++G ++ KL Q QTAI++ I + E+ A + Sbjct: 304 HLMTMILRKLLSSSTFAIQGTLQK--LATKLDAHLQGQTAIQLDDIAQDYEGFEELADEW 361 Query: 467 ---------------------MLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS----- 500 L ++ Q+F +T V+ L Sbjct: 362 AENDETKRNKPEPIPEEERPQALEEKQKLQQFAALASTIQKNSKGVKLLTALTKGFEKLQ 421 Query: 501 --HRSQKVLVICAKAATALQLEQVLREREGI----------------------------R 530 ++K ++ T L+++L E +G Sbjct: 422 ELGAAKKAIIFTESTRTQQYLKEIL-ETQGYAGQIVLFNGTNNDTHSRAIYTDWMQHHAG 480 Query: 531 AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLL 590 S +R WF E A +++ +E +EG N QF S +V +DLP+NP + Sbjct: 481 TDRISGSHSADKRQAIVDWFRNE---ATIMIATEAAAEGINLQFCSLVVNYDLPWNPQRI 537 Query: 591 EQRIGRLDRIGQAHDIQIHVPYLE-KTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYN- 648 EQRIGR R GQ D+ + + A + + + F + ++ + Sbjct: 538 EQRIGRCHRYGQKFDVVVINFLNKANAADQRVYQLLDQKFKLFSGVFGASDEVLGAIESG 597 Query: 649 --------DLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 + + + + D ++ E E + +L+ + +LLE + E + Sbjct: 598 VDFEKRIARIYKECRTAQEIQEAFDALEATFE--EEKQQKLDNTKLQLLE--NFDDEVHR 653 Query: 701 ALAESIEEQDDDTNLIAFAMNLF 723 L + Q L F L+ Sbjct: 654 KL--RVNLQQGKEYLNLFEQRLW 674 >UniRef50_D0LCG3 Helicase domain protein n=2 Tax=Actinomycetales RepID=D0LCG3_GORB4 Length = 937 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 187/952 (19%), Positives = 341/952 (35%), Gaps = 125/952 (13%) Query: 40 NRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALRE 99 R+ R + + R T DG +++V V E D + E Sbjct: 8 ERVIVRDEEWLVRAA-----RATDLDGTRVEVTGVSE---------LVRDQDAVFFDHPE 53 Query: 100 VFLDSKLVFSKPQDRLFAGQIDR-MDRFALRYRARKYSSEQFRMPYSGLRGQRTSL--IP 156 + +L P+ R L + + S G L + Sbjct: 54 LDTVHRL---DPRAGTLVADTSPGFRRTRLWLESVRRGSPIPASDTRITVGHEALLDRMD 110 Query: 157 HQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWL 216 +QL A + PR+L+ D VGLGKT+E G++L + + G ER+L++ P + Q+ Sbjct: 111 YQLRPAAQALKNLRPRILIGDAVGLGKTLEIGILLSELIRRGRGERILVVTPRAVLEQFQ 170 Query: 217 VEMLRRFNLRFALFDDERYAEAQH---DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAE 273 E+ RF + D + + + NPF + VI S+D + + HL Sbjct: 171 QELWTRFAIPLVRLDSAGIQKVKQTLPSSRNPFSYYKRVIVSIDTLKNPARYKHHLKSQH 230 Query: 274 WDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDP 333 WD +V+DE H+L+ + ++ + LA +L +ATP ES + +LDP Sbjct: 231 WDAVVIDECHNLI---NRGTQNNELARLLASQSDAFILASATPHNGKQESFAELINMLDP 287 Query: 334 NRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS 393 D + + D + + ++ S D + E+ ++ + + + Sbjct: 288 TAIVDPNDYKAK--------DIEHLYVRRHRNSADVKLDVSHKWRERRKPDIVGVSPTIA 339 Query: 394 EDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGI 453 E ++ +EL + + H T + G + FP L+ L P A++ S Sbjct: 340 E--RAVLRELEDVWL--HPTGDPVIEG--KGRQLFPW-TLYKAFLSSP----RALRASIA 388 Query: 454 MGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYL-----TSHRSQKVLV 508 R DR R+ + +R+ E AT ++E L+ YL + ++V++ Sbjct: 389 RRLRTIDNDRDRESVALQRLDDLAERAEATTP---AKLEELVAYLGRIGVAASSDERVVI 445 Query: 509 ICAKAATALQLEQVLREREGIR---------AAVFHEGMSIIERDRAAAWFAEEDTGAQV 559 + T L+ LR R V H G+S + F ++ + ++ Sbjct: 446 FSERIDTLDWLQAELRRRLKFPTKAINGLLAVEVLHAGLSDEKIQAVVEGFGQKASPIRI 505 Query: 560 LLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYL----E 614 L+ S++ SEG N +V +DLP++ ++QR GR+DR GQ H QI L + Sbjct: 506 LIASDMASEGLNLHKECHQLVHYDLPWSFIRIQQRNGRIDRYGQLHSPQIAALALAAEDD 565 Query: 615 KTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINY--LASPDQTEGFDDLIKNCRE 672 T +V + + D + + + + DDL+ Sbjct: 566 VTDDLNVVTKLLQKEHEANRALGDAEVLLDLHDSKIEEETVMEAIRTGRDLDDLVP---- 621 Query: 673 QHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTN-LIAFAMNLFDIIGINQD 731 E +L +++ ++ E A A + DDD N L ++ G + D Sbjct: 622 --EPTPERLNPFARLMVQGGTHESEPAPETAARLSLFDDDDNYLTDELADISADGGTDLD 679 Query: 732 DRGDN--MIVLTPSDHMLVPDFPGLSED---------GITITFDREVALAR--------- 771 ++ +V L+ F L D + +T ++A R Sbjct: 680 IHREDEQDLVAFKPPQDLLTRFRDLPPDYLREQEIEKRLRLTGSPDLARDRLTRAQRAQD 739 Query: 772 ---EDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEA--QA 826 D F+ HP++ D + G G + I ++ A+ L + ++ +A A Sbjct: 740 SSWPDVHFLAPIHPVLDWAGDRAI-GRFGRNEIPVVTG-AVDHPHFLTQAVWSNDAGRPA 797 Query: 827 PKQLQLNRFLPPTPVRM----------LLDKNGNNLAAQVEFETFN--RQLNAVNRHTGS 874 LP P + L + GN V + + L Sbjct: 798 IAHWGAVTGLPDAPEVVDFEFVVEVAGLSEAAGN---PGVPDDALEPLQHLVPAAVDAAR 854 Query: 875 KLVNAVQQDVH-------AILQLGEAQIEKSARALIDAARNEADEKLSAELS 919 + A + D + + E++A + D +L E + Sbjct: 855 NHIRARRDDFEHNLIDRVDRYRADLTRWEQTALTIAAEPGKRTDARLEIEHT 906 >UniRef50_C8X714 Helicase domain protein n=2 Tax=Actinomycetales RepID=C8X714_NAKMY Length = 1044 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 169/783 (21%), Positives = 284/783 (36%), Gaps = 82/783 (10%) Query: 82 TYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSS---- 137 E+ + EV D++++ + G D+ R A A ++ + Sbjct: 48 LQSVEDDRFNEALSVIWEVEPDARVLPTSSLPDPNEG-FDQPQRLAAFLDAVRWGAVASA 106 Query: 138 --EQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQL 195 + P+ G R +QL +LLAD+VGLGKTIEAG++ + L Sbjct: 107 DVNALQAPFRS--GVRVED--YQLEPVARALTAPRVNLLLADDVGLGKTIEAGLVAVELL 162 Query: 196 LSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH---DAYNPFDTEQLV 252 L A R+++I P L +W EM +F F + + E+ A + A NPF L Sbjct: 163 LRQRARRIMVICPAGLTVKWRQEMAEKFGREFTVVNSEQCAVLRRTHGSAANPFRVYPLT 222 Query: 253 ICSLDFAR--RSKQRLEHLCEAE-------WDLLVVDEAHHL-----VWSEDAPSREYQA 298 I SL + R R ++ L+ + E +DLL++DEAHH+ S++ + Sbjct: 223 IVSLPWLRSPRGQRLLDEVLPVEGPADTREFDLLILDEAHHVAPAAPKQRYAVDSQQTKL 282 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAM 358 I +LA H L LTATP ES A L L+D RF + Q V + Sbjct: 283 IRRLAPHFEHRLFLTATPHNGYPESFEALLELVDNQRFA-RGVPPDRQAQREVVIRRLKT 341 Query: 359 LLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSA------------RQELVSM 406 + S E + Q E Q +E A + +LV++ Sbjct: 342 EILEPDGSKRFRQRRTEPLPVQYPEDERQGHALLTEFAAARGIRLKTNRRGRRAADLVTL 401 Query: 407 LMDRH------GTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSA 460 L + R + N + G P + + A + Sbjct: 402 LFKKRLFSSPAAFGRTVAVYRENQLAGSPSASSDAEPAWMDDFLGDIADLDDEDMADEED 461 Query: 461 EDRARDMLY---PERIYQEFEGDNATWWN-----FDPRVEWLMGYLTS-------HRSQK 505 + R + P E W D + L+ YL + +++ Sbjct: 462 DAVRRATVLQGGPSDTELELLERLRLWAEAHTPNPDAKASELLTYLRAVCHPDRDWTNER 521 Query: 506 VLVICAKAATALQLEQVLRER-EGIRAAVFHEGMSIIERDRAAAWFAEE--DTGAQVLLC 562 V+V T L ++L++ G V H GM+ +ER+ F + + ++L+ Sbjct: 522 VVVFTEYRDTQDWLVRLLQQDGLGAGVRVLHGGMNPVERENLRQAFQADPTEDPVRILIA 581 Query: 563 SEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEK------ 615 ++ SEG + ++ +D+PFNP+ LEQRIGR+DR GQ D ++ Sbjct: 582 TDAASEGIDLHWQCHRLINYDIPFNPNKLEQRIGRIDRYGQRFDPEVFHFVGTGFGRAVD 641 Query: 616 --TAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYND--LINYLASPDQTEGFDDLIKNCR 671 A + E + E + L ++ E K Sbjct: 642 TYEADLEFLARVAEKVARMEEDLGAVNAVLADAVQRRMLGQHVDLDHAVEEPRRTRKGRV 701 Query: 672 EQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQD 731 + Q+++ D+L + + Q+L ++ ++ D + Sbjct: 702 ASDADIAGQVQRLHDQLTDSVAALNLNPQSLKRVVDTALALSH-QQSLTRANDPDPVWDV 760 Query: 732 DRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVAL-AREDAQFITWEHPLIRNGLDL 790 +T D +P P + +TFD E+A RED F HPL+ L Sbjct: 761 PALTGTWEITTRD---LPH-PLRPDQRRPVTFDPEIAARRREDVVFAHLGHPLVTRATRL 816 Query: 791 ILS 793 + + Sbjct: 817 LRA 819 >UniRef50_Q4SNT6 Chromosome 15 SCAF14542, whole genome shotgun sequence n=1 Tax=Tetraodon nigroviridis RepID=Q4SNT6_TETNG Length = 2331 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 108/596 (18%), Positives = 212/596 (35%), Gaps = 45/596 (7%) Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQR-----TSLIPHQLNIAHDVGRRHAPR 172 G+++ + R K + + L R +L +QL + + R Sbjct: 863 GKVEEFKKIQNRQPRLKRTPRPSPGSWKKLEESREYKNANTLREYQLEGVNWLLFNWYNR 922 Query: 173 --VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 +LADE+GLGKTI++ +L + +G L+I P + W E N+ ++ Sbjct: 923 QNCILADEMGLGKTIQSITLLSEIYAAGVQGPFLVIAPLSTITNWEREFSTWTNMNAIVY 982 Query: 231 DD---ERYAEAQHDAYNPFDTEQLV---------ICSLDFARRSKQRLEHLCEAEWDLLV 278 R Q++ Y + + L+ I + + L E W ++ Sbjct: 983 HGSLASRQMIQQYEMYCKDEKDHLIPGAYKFDALITTFEMILSD---CPELREISWRCVI 1039 Query: 279 VDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHD 338 +DEAH L ++ + +++ + + +LLT TP Q +E F+ L L+P +F Sbjct: 1040 IDEAHRL---KNRNCKLLDSLKMM--DLEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPS 1094 Query: 339 FAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQS 398 +F+ E + + + + L L L E + E+++ P + + Sbjct: 1095 EIEFLREFGDLKTEEQVQKL---QSILKPMMLRRLKEDV-EKNLAPKQETIIEV--ELTD 1148 Query: 399 ARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARK 458 +++ +++R+ + L N+ + V L + L ++G Sbjct: 1149 VQKKYYRAILERNFSFLSLGANSNSNVPN-----LLNTMMELRKCCNHPYLINGAEEKIV 1203 Query: 459 SAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQ 518 + D P+ Q D + L KVL+ Sbjct: 1204 AELREVYDPSAPDFHLQALIRSAGKLVLLDKLLPRLKA-----GGHKVLIFSQMVRCLDI 1258 Query: 519 LEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASH 577 LE L + + R A F++ D+ V LLC+ G G N A Sbjct: 1259 LEDYLINKR-YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADT 1317 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP 637 V+FD +NP Q R RIGQ+ ++++ + + ++ L Sbjct: 1318 CVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQ 1377 Query: 638 TGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHS 693 + DS N + + + ++++ E+ D++L+ + Sbjct: 1378 SMSGNKDSNVNGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRA 1433 >UniRef50_D2SCJ3 Helicase domain protein n=3 Tax=Actinomycetales RepID=D2SCJ3_9ACTO Length = 973 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 165/801 (20%), Positives = 283/801 (35%), Gaps = 86/801 (10%) Query: 57 PGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQD-RL 115 PG + D + K+ +G L + + A LD + P D R+ Sbjct: 16 PGSVVEVRDEQWLITGVEKDGDGWLIDVQGLTELVRDTTATFATVLDD-VRVVDPADARV 74 Query: 116 FAGQIDRMDRFALRYRA-RKYSSEQFRMPYSGLRGQRT-SLIPHQLNIAHDVG--RRHAP 171 A R L A + S P + + + +Q P Sbjct: 75 VADDSPAYRRTRLWLEAMLRKSPVPLTDPALTVATRGLADPLGYQQAAVRKALDPENLRP 134 Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 R+LLAD VGLGKT+E GMIL + + G ER+L++ P + Q E+ RF L F D Sbjct: 135 RILLADAVGLGKTLEIGMILAELVRRGRGERILVVTPRHVLEQMQFELWTRFALPFVRLD 194 Query: 232 D---ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 +R + NPF + VI S+D + + L HL + WD +V+DE+H++ Sbjct: 195 SLGIQRIRQQLPANRNPFTFYKRVIISIDTLKSDR-YLAHLQKQRWDAVVIDESHNVT-- 251 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 ++ S+ + LA ++L +ATP S +R+LDP+ +E+ Sbjct: 252 -NSTSQNNRLARLLASRTDALVLASATPHNGKTASFAELVRMLDPSAVRPDGGLIED--- 307 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM 408 + +++ ++ S D +++G E+ L A S +E A R+ + L Sbjct: 308 -----EVKRLVIRRHRHSPDVASVVGGDWAERKEPQNLLVAPSPAESAI-VRELEDTWLY 361 Query: 409 DRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDM- 467 G+S N FP L L P + +++ D+A Sbjct: 362 PPDGSSPYSGANG----GLFPW-TLAKAFLSSPAALRESVRERIRRLDPPRKGDQAARPA 416 Query: 468 ------LYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS-----HRSQKVLVICAKAATA 516 E + + L+ YL + + +V + AT Sbjct: 417 PTSEQRREIEALENLDALAAEAGTETSGKCAALLTYLRKIGVGPKKPMRAVVFAERVATL 476 Query: 517 LQLEQVLREREGI---RAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ 573 L++ L G+ + AV H G+S +++ F + + +VL+ ++ SEG N Sbjct: 477 RWLQESLCADLGLSQDQVAVLHGGLSDVDQQEVVESFKQASSPIRVLVTGDVASEGVNLH 536 Query: 574 F-ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTA-----QSVLVRWYHE 627 ++ FD+P++ +EQR GR+DR GQ H QI L+ + ++ E Sbjct: 537 AQCHELIHFDIPWSLIRIEQRNGRIDRYGQKHQPQITTLLLDPDSGKFAGDVRVLAKLVE 596 Query: 628 GLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDR 687 D ++ + EG D + + + E +KA G Sbjct: 597 KEDEAHRALGDSASLMGKYDVEAEEDAIRRVLAEGRD--LDDEVKTVEEVKAS--PGIAG 652 Query: 688 LLEIHSNGGEKAQALAESIE--EQDDDTNLIAFAMNLFDII----------GINQDDRGD 735 L + + F D G++ + + Sbjct: 653 LFARLTAAKPADVPTTAPPSGGSVGVFPTELDFFREALDEFLPTPGAEPPNGVSWKEHPE 712 Query: 736 NMIVLTPSDHMLVPDFPGLSED-----------GITITFDR-----EVALARE------D 773 IV L L + + T R ALA E + Sbjct: 713 YSIVEFVPPADLRQRLEVLPQSYLAARRVAQKMRLASTPQRGKAELTQALADESTSLWPE 772 Query: 774 AQFITWEHPLIRNGLDLILSG 794 A ++ HP++ D L+ Sbjct: 773 AHYLAPLHPVVDWASDRALAS 793 >UniRef50_Q4RLJ2 Chromosome undetermined SCAF15020, whole genome shotgun sequence. (Fragment) n=3 Tax=Tetraodontidae RepID=Q4RLJ2_TETNG Length = 3070 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 104/585 (17%), Positives = 201/585 (34%), Gaps = 53/585 (9%) Query: 127 ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKT 184 LR+ R S + ++ +S L +QL + + R +LADE+GLGKT Sbjct: 248 DLRHVDRPPSEKWQKLDFSRDYRNGNELREYQLEGMNWLLFNWYNRKNCILADEMGLGKT 307 Query: 185 IEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYN 244 I++ L++ G LII P + W E ++ ++ + + Y Sbjct: 308 IQSITFLYEIFNMGIRGPFLIIAPLSTITNWEREFRTWTHMNVIVYHGSQISRQMILQYE 367 Query: 245 PFDTEQL------------VICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAP 292 F +Q +I + + L L W +V+DEAH L ++ Sbjct: 368 MFYRDQQGNTIPSVLKFHGLITTFEMIMADCPELRKL---HWRCVVIDEAHRL---KNKN 421 Query: 293 SREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPV 352 + + ++ + ++ +LLT TP Q +E F+ L L+P +F + F+EE + + Sbjct: 422 CKLLEGLKLM--NLEHKVLLTGTPLQNSVEELFSLLNFLEPLQFPSESTFLEEFGDLK-- 477 Query: 353 ADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHG 412 +++++ L ++ +L+ D E + ++E + ++ Sbjct: 478 -------------TDEQVKKLQAILK----PMMLRRLKDDVEKNLAPKEETIIE-VELTN 519 Query: 413 TSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGAR--KSAEDRARDMLYP 470 + +R F + + +P ++ SAE++ + Sbjct: 520 IQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLITGSAEEKILESFRK 579 Query: 471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREG 528 + ++ + L KVLV LE L +R Sbjct: 580 SYSPDAADFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQRR- 638 Query: 529 IRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNP 587 + +R A F + D+ V LLC+ G G N A ++FD +NP Sbjct: 639 YSYERIDGRVRGNQRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP 698 Query: 588 DLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI----- 642 Q R RIGQ+ ++++ + + + L + Sbjct: 699 QNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNG 758 Query: 643 YDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDR 687 + + L D + E Q+ Q R + Sbjct: 759 VQQLSKLEVEDLLKKGAYGALMDEEDEGSKFCEEDIDQILQRRTQ 803 >UniRef50_A4VQ25 Superfamily II DNA/RNA helicase, SNF2 family n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VQ25_PSEU5 Length = 957 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 167/854 (19%), Positives = 325/854 (38%), Gaps = 96/854 (11%) Query: 127 ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIE 186 R R +E + G+ +P QL AH V ++ PR+L+AD VGLGKT+E Sbjct: 84 EARLRQSALQNESVVIGQHGVMDA----LPFQLQPAHQVLQQLRPRLLIADTVGLGKTLE 139 Query: 187 AGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD---AY 243 AG++ + + G A R+L++ +++ Q+ E RF + D + D + Sbjct: 140 AGILTAELMRRGKARRILVVTTKSMMRQFQQEFWNRFTIPLTRLDSAGIQRIRRDIPANH 199 Query: 244 NPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLA 303 NPF+ I S+D +R + +L +A WDL+++DEAH++ + + ++ + E L+ Sbjct: 200 NPFNYYDRTIISVDTLKRDSEYRHYLEKAWWDLIIIDEAHNVSYKGN-RTQSNRLAELLS 258 Query: 304 EHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGN 363 + ++LLTATP +S + +R+LDP A + + D + + Sbjct: 259 QRSDALILLTATPHNGKKDSFASLMRMLDPTVLPSGADYTRD--------DVEHLFI--R 308 Query: 364 KLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGT----SRVLFR 419 + D + + E+++ L A+ A A EL ++ G+ +LFR Sbjct: 309 RFKKDVREQMKQDFPEREVFRLATDASPAENLAFDALAELK---LNSEGSGARDGAMLFR 365 Query: 420 NT-RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 + P L T++ + + + G R +Q Sbjct: 366 TVLEKALFSSPAACLQTLRERIRKLENKDPQHPDLDGLRDLQGLVQAIGPQQFSKFQHLI 425 Query: 479 GD--NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIR---AAV 533 + W +D R S ++++ + T L+Q L + G++ A+ Sbjct: 426 EQLRSGQHWRWDSR----------DPSDRLVIFTERVETLKFLQQELPKALGLKDDAVAI 475 Query: 534 FHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQF-ASHMVMFDLPFNPDLLEQ 592 H + E + F + + ++L+ S++ SEG N + A ++ FD+ ++ + +Q Sbjct: 476 LHGQLPDQEIQQTVEDFGKTHSPLRLLIASDVASEGLNLHYQAHRLIHFDISWSLMVFQQ 535 Query: 593 RIGRLDRIGQAHDIQIHVPYLEKTAQSV--LVRWYHEGLDAFEHTC-------------- 636 R GR+DR GQ +I E + + +R+ +D E Sbjct: 536 RNGRVDRYGQTRAPKIAYLLTEPRHERIRGDLRYLEILIDKDEQAAKNIGDPSAFMGLYD 595 Query: 637 ------PTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLE 690 + I + + L + D + F+ L + + + E Sbjct: 596 EELEELEVAKAIEGNATLEAFEALLAGDDVDPFEALWASASASETPAVYTAQPQSAQTQE 655 Query: 691 IHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIG--INQDDRGDNMIVLTP---SDH 745 + S G Q L +++ + + + +D ++ D +L S+ Sbjct: 656 LTSLFGNSYQYLRDALRLL-AEQSPRDYPPVKYDDANKTLSFQPSRDLAQLLKRDLASEM 714 Query: 746 MLVPDFPGLSEDGITITFDREVALARE-----DAQFITWEHPLIRNGLDLILSGDTGSST 800 + +S D + + + AR+ ++ HP+ + LD L G Sbjct: 715 WPEDNTFAMSADKTVV--ESAIRQARDTNAWPQLHYLWALHPIAQ-WLDYKLMALFGRQR 771 Query: 801 ISLLK-NKALPVGTLLVELIYVVEAQAPKQLQ---LNRFLPPTPVRMLLDKNGN-----N 851 LL+ + L G E I +V AQ P + L ++ + L+ G Sbjct: 772 APLLRVAQGLHSG----EAIVLVLAQVPNRRGQAVLAEWMG-----VQLNAAGQVQGVLG 822 Query: 852 LAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEAD 911 L ++ L + + + + A L ++ R + A + Sbjct: 823 LEDALQRTGLAGNLGSGANIRANDGNAPDARALQAALPAVIQAAQQHIRPIKQAFDADCR 882 Query: 912 EKLSAELSRLEALR 925 +L ELS+L+ L+ Sbjct: 883 ARLDRELSKLKTLQ 896 >UniRef50_Q54UZ8 Myb domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q54UZ8_DICDI Length = 2373 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 105/570 (18%), Positives = 203/570 (35%), Gaps = 63/570 (11%) Query: 154 LIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPET 210 L P+QL + + +L DE+GLGKT+++ IL G L++ P T Sbjct: 509 LRPYQLEGLNWLSFCWHEQRNSILGDEMGLGKTVQSVSILETLRKVHGIRGPFLVVAPLT 568 Query: 211 LQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYN-------------------PFDTEQL 251 W E ++ ++ D Y + Sbjct: 569 TIPHWKREFENWTDMNALVYHDSGAGRPICRNYEFYLKDKDGGGGGASGGASGKITKFNV 628 Query: 252 VICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLL 311 +I + + A + HL W LV+DEAH L ++ + + + +LL Sbjct: 629 LITTYEMAITDRT---HLSRIPWKYLVIDEAHRL---KNKSCKLTIELRSYS--FDHLLL 680 Query: 312 LTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELN 371 LT TP Q + ++ L LDP +F + QF+ E + + + ++ L L Sbjct: 681 LTGTPLQNNTQELWSLLNFLDPKQFSNLDQFLLEYGDLKESSQVESL---QAILKPYLLR 737 Query: 372 MLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKR 431 + E + E+ I P + + + +++ + +++ F R G K Sbjct: 738 RMKERV-EKSIAPKEETIVEV--ELTTVQKKYYRAIYEKN------FSFLRKGGKSNQGP 788 Query: 432 ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRV 491 L I + L G+ + S + ++I+Q+ + D + Sbjct: 789 SLLNIMMELRKCCNHPYLTKGVEQSETS------SIKDKDQIFQKLIQASGKLVLIDKLL 842 Query: 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA 551 L + KVL+ + L+ L R G + +R A F+ Sbjct: 843 PKL-----KLGNHKVLIFSQMVSVLDILDDYLTYR-GYPHERIDGSIKGNDRQAAIDRFS 896 Query: 552 EEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610 + D+ V LLC+ G G N A +++FD +NP Q R RIGQ ++++ Sbjct: 897 KPDSDRFVFLLCTRAGGIGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYR 956 Query: 611 PYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIK-- 668 + T + ++ + L ++ DS + + ++ + I Sbjct: 957 LVTKNTYERLMFDKASKKLGLDRAVLTKMNSLADSNNGNNSSSSSTTKDELPDKETINSL 1016 Query: 669 ------NCREQHEALKAQLEQGRDRLLEIH 692 ++ + + E+ D++L+ Sbjct: 1017 LKFGVYAIKDDDTSSEKFYEEDIDQILDRS 1046 >UniRef50_A9T545 SNF2 family chromodomain-helicase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T545_PHYPA Length = 1791 Score = 325 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 121/599 (20%), Positives = 211/599 (35%), Gaps = 57/599 (9%) Query: 154 LIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPET 210 L +Q + R +LADE+GLGKTI++ +L L+IVP + Sbjct: 725 LRNYQEEGVTWLDHNFENRTNCVLADEMGLGKTIQSVAMLETLRCKRNLRGPFLVIVPVS 784 Query: 211 LQHQWLVEMLRRFNLRFALFD---DERYAEAQHDAYNPFD----TEQLVICSLDFARRSK 263 W E+ ++ ++ D+R Q++ + +++ S + R + Sbjct: 785 TLGHWQREIESLTDMNCIVYSGTQDDRDIIRQYEFNFASNSKALKFNVLLTSFEMLMRDQ 844 Query: 264 QRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMES 323 + L + W ++VDEAH L + S+ QA+ QL G+LLLT TP Q + Sbjct: 845 NK---LAKETWQYIIVDEAHRL---KSRVSKTTQALRQLKVRKGGLLLLTGTPVQNNTKE 898 Query: 324 HFARLRLLDPNRFHDFAQFVEEQ---KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 F+ L LLDP +F+ F+E+ ++ + D +L L + ++ + ++ Sbjct: 899 IFSLLNLLDPEKFNSEEDFLEKYGEIEDAEQIKDLQENILRPRLLRRMKEDVEKSIPQKE 958 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPL 440 + ++ ++ + V+ L+ TS N RN K H Sbjct: 959 ETIVWVELTKDQRLFYKAILENNVASLLKGSSTSN--LPNLRNVAMELRKVCNHPFLCDG 1016 Query: 441 PTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS 500 TA A D + Q G P+++ Sbjct: 1017 LEDSLTA-----------KLRSNANDSNASGNLLQNSSGKMILVDKLLPKLK-------- 1057 Query: 501 HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV- 559 ++VL+ LE + + G + ER A ++ +D+ V Sbjct: 1058 DAGRRVLIFSQFTIMLDLLEDYMIMK-GYSYERIDGKIRGSERQAAIDRYSAKDSDIFVF 1116 Query: 560 LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS 619 LL + G G A +++D +NP Q + R RIGQ D++I+ T + Sbjct: 1117 LLSTRAGGLGITLTAADTCIIYDSDWNPQNDLQAMARCHRIGQTKDVKIYRLITRNTYEE 1176 Query: 620 VLVRWYHEGLDAFEHTCPT--GRTI---YDSVYNDLINYLASPDQTEGFDDL-------- 666 L E G + +D L+ + A +G D+ Sbjct: 1177 RLFECSSRKYGLDEAILGNRVGADVNLDHDKHIESLLKHGAYDIMKDGGDEAAAEFNAQD 1236 Query: 667 IKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDI 725 I EQ + +G + + A+AES EQD D Sbjct: 1237 IDQILEQRTQQRQIGGRGNNTFSVATFKTNPEVDAVAES--EQDSKCFWQGLMPEACDR 1293 >UniRef50_UPI00016E17D4 UPI00016E17D4 related cluster n=2 Tax=Tetraodontidae RepID=UPI00016E17D4 Length = 2367 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 107/596 (17%), Positives = 211/596 (35%), Gaps = 45/596 (7%) Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQR-----TSLIPHQLNIAHDVGRRHAPR 172 G+++ + R K + + L R +L +QL + + R Sbjct: 763 GKVEEFRKIQNRQPRLKRTPRPSPSSWKKLEESREYKNANTLREYQLEGVNWLLFNWYNR 822 Query: 173 --VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 +LADE+GLGKTI++ +L + + L+I P + W E N+ ++ Sbjct: 823 QNCILADEMGLGKTIQSITLLSEIYAANIQGPFLVIAPLSTITNWEREFATWTNMNAIVY 882 Query: 231 DD---ERYAEAQHDAYNPFDTEQLV---------ICSLDFARRSKQRLEHLCEAEWDLLV 278 R Q++ Y + + L+ I + + L E W ++ Sbjct: 883 HGSLASRQMIQQYEMYCKDEKDHLIPGAYKFDALITTFEMILSD---CPELREISWRCVI 939 Query: 279 VDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHD 338 +DEAH L ++ + +++ + +LLT TP Q +E F+ L L+P +F Sbjct: 940 IDEAHRL---KNRNCKLLDSLKMM--DQEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPS 994 Query: 339 FAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQS 398 +F+ E + + + + L L L E + E+++ P + + Sbjct: 995 EIEFLREFGDLKTEEQVQKL---QSILKPMMLRRLKEDV-EKNLAPKQETIIEV--ELTD 1048 Query: 399 ARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARK 458 +++ +++R+ + L N+ + V L + L ++G Sbjct: 1049 IQKKYYRAILERNFSFLSLGANSNSNVPN-----LLNTMMELRKCCNHPYLINGAEEKIV 1103 Query: 459 SAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQ 518 + D L P+ Q D + L KVL+ Sbjct: 1104 AELREVYDPLAPDFHLQALIRSAGKLVLLDKLLPRLKA-----GGHKVLIFSQMVRCLDI 1158 Query: 519 LEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASH 577 LE L + + R A F++ D+ V LLC+ G G N A Sbjct: 1159 LEDYLINKR-YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADT 1217 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP 637 V+FD +NP Q R RIGQ+ ++++ + + ++ L Sbjct: 1218 CVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQ 1277 Query: 638 TGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHS 693 + +S N + + + ++++ E+ D++L+ + Sbjct: 1278 SMSGNKESNVNGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRA 1333 >UniRef50_D2QY10 Helicase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY10_9PLAN Length = 949 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 151/822 (18%), Positives = 297/822 (36%), Gaps = 77/822 (9%) Query: 55 FNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDR 114 F+ G + + G + V +++ L+ D E +G+ +D R Sbjct: 3 FSVGTLVKAR-GREWVVLPESQDDFLVVRPLGGTDAEVAGIDTYLESVDPASFDLPDPTR 61 Query: 115 LFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVL 174 L Q RM R A+R+ R + P+ P+QL + R+L Sbjct: 62 LGDFQSCRMLRNAIRFGFRSSAG-----PFRSFGKIAVEPRPYQLVPLLMALKLDPVRLL 116 Query: 175 LADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDER 234 +AD+VG+GKT+EA +I + L +R+ ++ P L QW E+ +F++ L Sbjct: 117 IADDVGIGKTVEALLIARELLDRAEVQRMSVLCPPHLAEQWQDELRDKFHIEAELVLSST 176 Query: 235 YAEAQH--DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLV-----W 287 + FD I SLD+ + S+ R A +L++VDEAH Sbjct: 177 AKRLDRVCGNRSVFDVFPYTIVSLDYIK-SESRRNDFIRACPELVIVDEAHTCTSSAQPG 235 Query: 288 SEDAPSREYQAIEQLAEH-VPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ 346 + ++ + +L++ +LL+TATP E + L LL+P F D + Sbjct: 236 RGGTRQQRHEVVRELSKSPNRHMLLVTATPHSGNEEGFRSLLGLLNPE-FADLPTDLSGD 294 Query: 347 KNYRPVADAVAMLLAGN----------------KLSNDELNMLGEMIGEQDIEPLLQAAN 390 +N R + +L ++ LG + + LL A Sbjct: 295 ENRRQRERLAQYFVQRRRGDIRHYLESDTSFPDRLEQEQTYKLGTSEYRKLFDRLLSYAR 354 Query: 391 SDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIK- 449 ++++ + + ++ + +L I P + + Sbjct: 355 EVVQESEGMSRVRQRVRWWAALALLRALASSPAAAAATLRSKLQAIAAESPDEVDDISRP 414 Query: 450 ---------------VSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWL 494 ++ E+ + +R+ + + DP++ + Sbjct: 415 LVFDDDAEDSADAPDITAGADLADLEENESDAAKERKRLLDMARAADKLEGDGDPKLVQM 474 Query: 495 MGYLTSHRSQ--KVLVICAKAATALQLEQVLRER--EGIRAAVFHEGMSIIERDRAAAWF 550 + + S+ + ++ C ATA L + LR+R +G+ + ER+ Sbjct: 475 VPIVKRLVSEGHRPILFCRFIATAEYLAEQLRQRLPKGVTVIAVTGQIPPSEREARIQEM 534 Query: 551 AEEDTGAQVLLCSEIGSEGRNFQFA-SHMVMFDLPFNPDLLEQRIGRLDRIGQAHD-IQI 608 + VL+C++ SEG N Q ++ +DL +NP EQR GR+DR GQ +++ Sbjct: 535 RNHEQY--VLVCTDCLSEGINLQHLFDSVIHYDLSWNPTRHEQREGRVDRFGQPKPEVKV 592 Query: 609 HVPY-----LEKTAQSVLVRWYHEGLDAFEHTCP---TGRTIYDSVYNDLINYLASPDQT 660 Y ++ VL+R + A + P T + +++Y L+ Q Sbjct: 593 LTYYGTDNQIDGVVLEVLIRKHKAIRKALGVSVPVPTTSNAVLEALYEGLLLRRKDTQQQ 652 Query: 661 ----EGFDDLIKNCREQHEALKAQLEQG---RDRLLEIHSNGGEKAQALAESIEEQDDDT 713 D+L E + + ++ R + E A +AE Sbjct: 653 MFQFPDDDELKPMTNEFNAEWQNAADREKKSRSLFAQHTIKPDEVAHEVAEIQSAIGSAA 712 Query: 714 NLIAFAMNLFDII-GINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALARE 772 ++ AF + G+ G I LT + + + ++ ++ + Sbjct: 713 DVDAFVTSSVKAFRGVITRQGGRCDIDLTEAPRAVRESIRSTPKFAGRF----QLPVSND 768 Query: 773 DAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTL 814 + +++ HP+I ++ ++++S A G + Sbjct: 769 EL-YLSRTHPVIEGLATYVMDSALDATSVSDGPVPAARCGVI 809 >UniRef50_D2M8T3 Helicase domain protein n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M8T3_RHOPA Length = 956 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 151/821 (18%), Positives = 273/821 (33%), Gaps = 92/821 (11%) Query: 43 YARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFL 102 +A D+P++ V G G +++ E+ L L + L L Sbjct: 61 FAVQDAPLSSVRRTLGT------GTVIEIREIATREQALVQ----LHQSGKVIWLPFERL 110 Query: 103 DSKLVFSKPQDRLFAGQIDRMDRFALRYRAR--KYSSEQFRMPYSGLRGQRTSLIPHQLN 160 P R F D A R ++ + + L +PHQ+ Sbjct: 111 R---RVKDPTLR-FKRSDPSGDHSAERTSLNIVAHALKGWNEATGALDRLDVDPLPHQIA 166 Query: 161 IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEML 220 + H + L+AD+VGLGKTIE G+++ R+L++VP L QW EML Sbjct: 167 LVHRIINSGQTNWLIADDVGLGKTIEVGLLMAGLERKENLRRILLVVPSGLTRQWKDEML 226 Query: 221 RRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFAR-----RSKQRLEH-----LC 270 +F+ RF ++ + + + + VI SLD A+ + L L Sbjct: 227 LKFDRRFLIYGVDFRIFDHRE----WGLYERVIISLDLAKPQSTDDNGADLSTTFGMLLA 282 Query: 271 EAEWDLLVVDEAHHL-VWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLR 329 WD+++ DEAH L + ++ + L ++LL+ TP Q L Sbjct: 283 AGNWDIVIFDEAHRLARNDRGQSTLRFRLAQALRRKTDSLVLLSGTPHQGDNGKFRNLLT 342 Query: 330 LLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAA 389 L P D +++ + V + + + + N L + I + IE A Sbjct: 343 LARP----DLRAAIDQLEFNSDVVREIVLRNRKIDTVDIDGNFLFKGISVKRIEVDHDAN 398 Query: 390 NSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIK 449 +D E+ L + L + + + + GF + A+K Sbjct: 399 FADMEE------NLKTYLRNGYQAGETI-GGSEGRAVGFVMTIYRKLASSSVAALHMALK 451 Query: 450 VSGIMGARKSAEDRARDMLYPERI---------------------YQEFEGDNATWWNFD 488 D L E I Q D Sbjct: 452 RRLDRILNGGIADHTVPPLQDEEIDDIENQTETASKQFFDGEVDMIQRLLIKTTDCMRLD 511 Query: 489 PR---VEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDR 545 + + L+ L + +KVL+ AT + +LR I + + H G + ++ Sbjct: 512 KKGNELVKLIDRLVNKDGKKVLIFTEYRATQAFILYILRSVLNIESVLIHGGHTADDKRA 571 Query: 546 AAAWFAEEDTGAQVLLCSEIGSEGRNFQF-ASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 A F ++ VL+ +E G EG N ++ +DLP+NP + QRIGRL R GQ Sbjct: 572 AVEKFEDD---VPVLISTEAGGEGLNMHRNCHILINYDLPWNPSRISQRIGRLYRYGQKQ 628 Query: 605 DIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPT-----------GRTIYDSVYNDL-IN 652 + + + + T + ++ + + A T + + + + I+ Sbjct: 629 RVIVFNFHAKDTIDNEILGVLIDRVMAIVATMSKVSAEFSDYDAYAAEVMGELLDRIDIS 688 Query: 653 YLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDD 712 L + D E + + LL + + +IE Sbjct: 689 TLLEEAKNGTIDRPADRIDAALEEARKAKRMQDEVLLSLSDF------EIKNTIENTFST 742 Query: 713 TNLIAFAMNLFDIIGINQD-DRGDNMIVLTPSDHMLVPDFPGLS-EDGITITFDREVALA 770 + + I + ++ + M FP I +T +R Sbjct: 743 KEVASIIKRALPFFRIEFSHESDPEKFLIRLPEDMK-GKFPEFGTRTVIPVTTNRSSWRP 801 Query: 771 REDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPV 811 D + + + +D + S + + +LP Sbjct: 802 HTDLVLLDFSSSFVEFIIDSVTSPEF-DGGYGSFDDPSLPE 841 >UniRef50_P87114 Uncharacterized ATP-dependent helicase fft1 n=1 Tax=Schizosaccharomyces pombe RepID=FFT1_SCHPO Length = 944 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 102/547 (18%), Positives = 201/547 (36%), Gaps = 40/547 (7%) Query: 149 GQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLLSGAAERVLII 206 +L +Q+ + + + ++ +LADE+GLGKT + L G R L++ Sbjct: 409 ASGITLKSYQIVGLNWLCLMYKAKLSGILADEMGLGKTCQVISFLASLKEKGIQNRHLVV 468 Query: 207 VPETLQHQWLVEMLRRF-NLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQR 265 VP + WL E + +LR + + Y +++ + A S+ Sbjct: 469 VPSSTLGNWLREFEKFCPSLRVESYSGTQSERINKRYYLMDTDFDVLVTTYQLASGSRDD 528 Query: 266 LEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHF 325 L + +D+ + DE H+L ++ S Y+ + + + LL+T TP Q ++ Sbjct: 529 RSFLRKQRFDISIFDEGHYL---KNRMSERYKHLMNIPANF--RLLITGTPLQNNLKELI 583 Query: 326 ARLRLLDPNRFHDFAQFVEEQKNYRPVADA--VAMLLAGNKLSNDELNMLGEMIGEQDIE 383 + L + P F + Q ++ + +D L+ ++S ++ I + E Sbjct: 584 SLLAFMLPKVFDNNMQGLDIIYKIKTTSDGDIERAYLSQERISR-AKTIMNPFILRRRKE 642 Query: 384 PLLQAANSDSEDAQSARQEL--VSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLP 441 +L + + E +S+ + ++ N N + K LH +L Sbjct: 643 NVLSDLPPKIQHVEYCHMEETQLSLYLSVLELKNLVNANRENILMQLRKAALH--QLLFR 700 Query: 442 TQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE--------------------GDN 481 +QY ++ +M R ED D P+ I+++ E Sbjct: 701 SQYN--LETLSLMSKRILREDAYLDA-NPQYIFEDMEVMSDFELHKLADQYRHLHPFALK 757 Query: 482 ATWWNFDPRVEWLMGYLTSHRS-QKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI 540 W +V+ L L R +++L+ LE VL + + + Sbjct: 758 GKPWMDSAKVKKLCSLLKKSRPNERILIFSQFTQVLDILEYVLNTLD-LEFLRLDGSTPV 816 Query: 541 IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI 600 R + F + LL ++ G G N A+ +++FD FNP Q R R+ Sbjct: 817 ETRQQLIDDFHTNENYKVFLLSTKSGGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRV 876 Query: 601 GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT 660 GQ + ++ + T + + R + L I + +L+ L + Sbjct: 877 GQTRPVHVYRLITKNTIEENIRRLANTKLTLESSLTTDSEKIQKEISGELMKSLQMDGRV 936 Query: 661 EGFDDLI 667 + D + Sbjct: 937 DTMDGSV 943 >UniRef50_B1LDN7 Helicase family protein n=20 Tax=Bacteria RepID=B1LDN7_ECOSM Length = 952 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 173/942 (18%), Positives = 337/942 (35%), Gaps = 96/942 (10%) Query: 55 FNPGDTITSHD-GWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQ- 112 + PG + D W+++ + + G L + L L+ K+ P Sbjct: 6 YAPGMRVVIRDAEWRIRRADDSGDGGYLLTCDGISELVRGKEGLFLTKLEQKVEILDPAK 65 Query: 113 DRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR 172 L + L ++ +P QL+ + R Sbjct: 66 THLVEDESANYQAAQLYIESQLRQRVPTDSKVHFGHLAAMDSMPFQLDPTRMALAQPRQR 125 Query: 173 VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD 232 +L+AD VGLGKT+EAG+++ + + G +R+L++ +++ Q+ E RF + D Sbjct: 126 ILIADAVGLGKTLEAGILVSELIRRGRGKRILVLAVKSMLTQFQKEFWSRFAIPLTRLDS 185 Query: 233 ERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSE 289 + ++ +NPF I S+D ++ + HL A WD++V+DEAH++ Sbjct: 186 AGLQKVRNRIPTNHNPFHYFDKTIISIDTLKQDIEYRHHLENAWWDIIVIDEAHNVA-ER 244 Query: 290 DAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHD-----FAQFVE 344 S + + LA +++L+ATP ES + + +LDP + +A F + Sbjct: 245 GTSSLRSKLAKLLAGRSDTLIMLSATPHDGKAESFASLMNMLDPTAIANPKEYEYADFAD 304 Query: 345 EQKNYRPVADAVAMLLAGNKLSND--ELNMLGEMIGEQDIEPLLQA--ANSDSEDAQSAR 400 + R V ++G + +L L E+ L+++ + D E AQS + Sbjct: 305 KNLVVRRFKKDVKDQMSGEFPERNIVKLTRLASGAEEEAYRRLVESQFRDDDDEQAQSNK 364 Query: 401 QELVSMLMDRHGTSRVL--FRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARK 458 L + +++ S + N +K R+ H + + + ++ I ++ Sbjct: 365 GRLFKITLEKALFSSPMACASVVANRLKRLESRKDHNSQSQINELESLLLALNNIDASQF 424 Query: 459 SAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQ 518 S D + + + + ++ ++++ T Sbjct: 425 SKYQLLLDTIRKD-----------------------LAWKANNTEDRLVIFTESIKTLEF 461 Query: 519 LEQVLREREGIR---AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFA 575 LEQ LR ++ A F + + ++L+CS++ SEG N Sbjct: 462 LEQQLRADLKLKDDQIATLRGDQGDTVLMETVEAFGKTQSPLRLLVCSDVASEGINLHHL 521 Query: 576 SH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTA-----QSVLVRWYHEGL 629 SH M+ FD+P++ + +QR GR+DR GQ H QI E + ++ Sbjct: 522 SHKMIHFDIPWSLMVFQQRNGRIDRYGQKHQPQIRYLLTEASEPQINGDMRVLEVLINKD 581 Query: 630 DAFEHTCPTGRTIYDSV-----YNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQG 684 + + + ++ D FD L+ + + Sbjct: 582 EQAQKNIGDSSEFTGKFTQEEEEEQVAEFMMQDDGASLFDQLLNSNVSESAE-------- 633 Query: 685 RDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIG-----INQDDRGDNMIV 739 D EI S A + E+ A+ + I + DN + Sbjct: 634 HDLFGEICSAVSSDASMVTETDTSLFASEQ--AYCERALGYLKASGQTIQYETLPDNTLS 691 Query: 740 LTPSDHM--LVPDFP----------GLSEDGITIT--FDREVALAR--EDAQFITWEHPL 783 L + + P LS+D IT R D Q++ +P+ Sbjct: 692 LVAPEELRRRFNQLPPEIAPENWQLYLSQDKTVITDAIARARGEQHAWPDVQYLWQINPV 751 Query: 784 IRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRM 843 ++ LD +S G +++ L E +++ P + + P + Sbjct: 752 VQ-WLDDKISSAFGRHQAPVIRLPYLLEPD---EDHFILSGLFPNR----KSHPMVNPWI 803 Query: 844 LLDKNGNNLAAQVEF-ETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARAL 902 ++ N +L F E R N+ T S + Q +L+ A + Sbjct: 804 VVSFNRESLIGSQPFAEFLQRHPQLSNKLTNSGGKDRNHQRQQDLLEAAIAHAREVFIHD 863 Query: 903 IDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQ 944 +A +++L+ L +L+ LR + EL ++ +Q Sbjct: 864 RNAFETHINQQLNEHLQKLDVLRGR--QLSQLELDFADNKQQ 903 >UniRef50_A2D9P9 F/Y-rich N-terminus family protein n=1 Tax=Trichomonas vaginalis RepID=A2D9P9_TRIVA Length = 1924 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 99/515 (19%), Positives = 189/515 (36%), Gaps = 32/515 (6%) Query: 150 QRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLII 206 ++ P+Q+ + + +LADE+GLGKT+++ L+ LII Sbjct: 513 SGYTIRPYQIEGVCFLVKSWFNNQNAILADEMGLGKTLQSISFLYYLHRVQKVWGPFLII 572 Query: 207 VPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYN------PFDTEQLVICSLDFAR 260 P + QW E+ ++ A + + Q Y P +++ + ++ Sbjct: 573 CPLSTIEQWEREIKEWTTMKVACYSGIKPRRDQMAEYELFFSETPIPKFHILLTTYEYII 632 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG 320 + + EW ++ +DEAH L ++ S+ QA++ H LLLT TP Q Sbjct: 633 SDRNIFNSI---EWQVICIDEAHRL---KNTNSKLMQALKD--YHTQYKLLLTGTPLQNN 684 Query: 321 MESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 + ++ L LD +F+D F Q + + + + L L + + E+ Sbjct: 685 ITELWSLLNYLDEEKFNDIEAF---QAQFGKLEEHEQITELQGILKPLMLRRMKSDV-EK 740 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPL 440 I+PL + E A + Q+L + + T + TR K L+ I + L Sbjct: 741 GIKPLEEVI---IECAMTQHQKLYYQSIYQKNTEYL----TRGAHKN-NSTNLNNIFMEL 792 Query: 441 PTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS 500 ++G + E + F ++ + + + Sbjct: 793 RKVCNHPYLLNGAEEQILIERRDMSKIPANEPLPDGFVEESLIRSSGKMILLDKLLAKLK 852 Query: 501 HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV- 559 + +VL+ L+ L R G + ER +A + + ++ V Sbjct: 853 NDGHRVLIFSQMTRMLDILQDYLYNR-GYEYERIDGTIRGDERQKAIDRYNKPNSPIFVF 911 Query: 560 LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS 619 LLC+ G G N A ++++D +NP Q R RIGQ +++++ + + Sbjct: 912 LLCTHAGGLGINLTSADTVIIYDSDWNPQNDIQATARCHRIGQTKEVKVYRFITANSYER 971 Query: 620 VLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYL 654 + L +H G D+ L Sbjct: 972 KMFDRASYKLG-LDHAVLEGTGKQQMKTEDIEKLL 1005 >UniRef50_B0R0I6 Chromodomain-helicase-DNA-binding protein 8 n=1 Tax=Danio rerio RepID=CHD8_DANRE Length = 2511 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 113/622 (18%), Positives = 204/622 (32%), Gaps = 53/622 (8%) Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGL-----RGQRTSLIPHQLNIAHDVGRRHAPR 172 G+++ + R K + + L L +QL + + R Sbjct: 806 GKVEEFRKIESRQPRLKRTPRPAASAWKKLDESTEYKNGNQLREYQLEGVNWLLFNWYNR 865 Query: 173 --VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 +LADE+GLGKTI++ +L + +G +II P + W E ++ ++ Sbjct: 866 QNCILADEMGLGKTIQSIALLSEMFSAGVQSPFMIIAPLSTITNWEREFSNWTDMNAIVY 925 Query: 231 DD---ERYAEAQHDAYNPFDTEQLV---------ICSLDFARRSKQRLEHLCEAEWDLLV 278 R Q++ Y D L+ I + + L E W +V Sbjct: 926 HGSLASRQMIQQYEMYCKDDKGHLIPGAYKFDALITTFEMILSD---CPELREISWRCVV 982 Query: 279 VDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHD 338 +DEAH L ++ + +++ L + +LLT TP Q +E F+ L L+P +F Sbjct: 983 IDEAHRL---KNRNCKLLDSLKML--EIEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPS 1037 Query: 339 FAQFVEEQKNYR--PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDA 396 +F+ E + + + +L L + ++ + +Q+ ++ + + Sbjct: 1038 EIEFLREFGDLKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYY 1097 Query: 397 QSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGA 456 ++ + S L N N L + L ++G Sbjct: 1098 RAILERNFSFL----SMGATQNSNVPN---------LLNTMMELRKCCNHPYLITGAEEK 1144 Query: 457 RKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATA 516 S D L P+ Q D + L KVL+ Sbjct: 1145 IVSELREVYDPLAPDFHLQALVRSAGKLVLLDKLLPRLKA-----GGHKVLIFSQMVRCL 1199 Query: 517 LQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFA 575 LE L + + R A F++ D+ V LLC+ G G N A Sbjct: 1200 DILEDYLI-HKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1258 Query: 576 SHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLD----A 631 V+FD +NP Q R RIGQ+ ++++ + + ++ L Sbjct: 1259 DTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAV 1318 Query: 632 FEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEI 691 + + I L D E Q+ Q R + I Sbjct: 1319 LQSMSGNKESSIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRATTITI 1378 Query: 692 HSNGGEKAQALAESIEEQDDDT 713 S G + A + ++ Sbjct: 1379 ESEGKGSTFSKASFVASENRTD 1400 >UniRef50_Q54CF8 Chromo domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q54CF8_DICDI Length = 3071 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 92/490 (18%), Positives = 179/490 (36%), Gaps = 43/490 (8%) Query: 151 RTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLS-GAAERVLIIV 207 SL Q+ + H LLADE+GLGKTI++ L S G L++ Sbjct: 895 NLSLKEFQVEGFLWLSYCWYHCRSSLLADEMGLGKTIQSIAFLQYLSQSVGIKGPFLVVA 954 Query: 208 PETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDT----EQLVICSLDFARRSK 263 P + W E+L+ ++ +F + Y ++++ + + Sbjct: 955 PLSTLGNWHKEILKWTKMKTLVFYGSQETRGFISKYEFKHKDTYLFEVLLTTYETIMSDH 1014 Query: 264 QRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMES 323 W L++DE H + ++ S+ ++ + ++LT TP Q M+ Sbjct: 1015 S---SFVRVPWRALILDEGHRI---KNDKSKVLSKLKSI--KTEHSIILTGTPLQNDMKE 1066 Query: 324 HFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIE 383 + L LDP++F+ +F++E + + + + + Sbjct: 1067 LWTMLNFLDPDKFNSCQEFLDEYSDLKEESQV-------------------SKLHQLLSP 1107 Query: 384 PLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQ 443 LL+ D E + ++E V ++ T + +R + F R + K LP Sbjct: 1108 YLLRRMKEDVELSIPIKEETVIQ-VELSSTQKTYYRAILERNREFLSRGIKQ-KTNLPKL 1165 Query: 444 YQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRV---EWLMGYLTS 500 I++ + ++ E+I + E ++ + L+ L + Sbjct: 1166 SNIMIQIRKVCNHPFLIPGAEESIVKQEKIAGD-EELGELLVKSSSKLVLVDKLLQRLKA 1224 Query: 501 HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV- 559 +VL+ + LE L+ RE + R + F ++ V Sbjct: 1225 E-GHQVLIFSQMVESLNILEDYLQYRE-YTYERLDGSIKSEVRQASIDRFQDKGANRFVF 1282 Query: 560 LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS 619 LL + G G N A +++FD +NP Q R RIGQ ++++++ T + Sbjct: 1283 LLSTRAGGVGINLTTADTVILFDSDWNPQSDLQAQARCHRIGQTNNVKVYRLITRNTYEE 1342 Query: 620 VLVRWYHEGL 629 L + L Sbjct: 1343 YLFECATKKL 1352 >UniRef50_A6FSF7 Helicase/SNF2 family domain protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FSF7_9RHOB Length = 871 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 160/749 (21%), Positives = 269/749 (35%), Gaps = 67/749 (8%) Query: 94 GVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTS 153 G +++V + ++ L Q+D R +A + + + R Sbjct: 33 GAVIQQVEANELHYLRSLENALQESQLDDPLATLARAQAL--AVQSINDQWGVFSRSRVQ 90 Query: 154 LIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQH 213 L+PHQL + V R R L+AD+VGLGKTIE+G+IL L SG RVL++ P L Sbjct: 91 LLPHQLWVCRQVTRTWPTRWLVADDVGLGKTIESGLILEPLLTSGRVRRVLVLTPARLAP 150 Query: 214 QWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAE 273 QW + F++R + A+ + ++T Q V+ S R K R L Sbjct: 151 QWRARLKTMFDIRLQEYS----ADLDRGRVSFWETAQQVVASFHTLRMKKARDRLLTAEP 206 Query: 274 WDLLVVDEAHHLVWSEDAPSREYQAIEQL--AEHVPGVLLLTATPEQLGMESHFARLRLL 331 WDL++VDEAHH E + Y +E+L A + ++L T TP + A ++L+ Sbjct: 207 WDLVIVDEAHHFQAQERTNTLTYSLLEELENAGKIGSLVLFTGTPHRGKDYGFLALMQLV 266 Query: 332 DPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANS 391 P+ F E+ + A + + + Sbjct: 267 RPDLFDPEKDIAEQLPDLHKAMIRNNKAQATDLQGKKLFKPVSTESVDYAYSTAEAEFYE 326 Query: 392 DSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAI--- 448 + + L R T+R+L + + + T + Sbjct: 327 TMSEFILDGRAYALNLTGRQQTARMLLLIALQKLAASSIAAISSALRRRRTTLSKRVTDV 386 Query: 449 ---------KVSGIMGARKSAEDRARDMLYPERIYQEFE-GDNATWWNFDPRVEWLMGYL 498 + + A +S D+ ML + I + E + A + +V L+ + Sbjct: 387 SLKDEDEPETLDEVAEAEESRPDQIALMLMQDEIERLDEILELADKVESETKVTKLVDLI 446 Query: 499 TSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVF--------------HEGMSIIE 542 + + VL AT + + L E+ G F E + Sbjct: 447 ETRLAPEEPVLFFTEYKATQALVHKTLEEKFGKGCVGFINGDERLVVSGPNDQETILQYP 506 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIG 601 RD+AA F T + L+ +E G EG + Q + +V DLP+NP L QR+GRL+R G Sbjct: 507 RDKAAEDFNGGRT--RFLISTEAGGEGIDLQDRCATLVHVDLPWNPMRLHQRVGRLNRYG 564 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 Q +Q+++ +T ++ + E L + + + +I E Sbjct: 565 QKRAVQVYLMRNPETVEARIWALLEEKLGRIQAALSASMEEAEDISQLVIGMTGGHFFDE 624 Query: 662 GFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKA----QALAESIEEQD------- 710 F E +L + D GGE A + + ++ D Sbjct: 625 LFS-------EGSTHQTDRLSEWFDS--RTMQFGGEDAVDAVRTIVGNVARYDFQSAGGD 675 Query: 711 ----DDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDRE 766 D L F N + R D + V TP D +D + FDR Sbjct: 676 IPKLDLPALEPFFRNAMHLNSRRVTKRDDGLSVATPEKWRGSVDLRDRYDD---LVFDRS 732 Query: 767 VALAREDAQFITWEHPLIRNGLDLILSGD 795 + + + + HPLI + + Sbjct: 733 LPADQAMIKLLGVGHPLIDRAIATCREQE 761 >UniRef50_Q9P2D1 Chromodomain-helicase-DNA-binding protein 7 n=26 Tax=Euteleostomi RepID=CHD7_HUMAN Length = 2997 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 103/564 (18%), Positives = 190/564 (33%), Gaps = 47/564 (8%) Query: 154 LIPHQLNIAHDVGRRHA--PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 L +QL + + +LADE+GLGKTI++ L++ L G L+I P + Sbjct: 968 LREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLST 1027 Query: 212 QHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF------------DTEQLVICSLDFA 259 W E L ++ + + Y + +I + + Sbjct: 1028 IPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMI 1087 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 L ++ W +V+DEAH L ++ + + ++ + + +LLT TP Q Sbjct: 1088 LTDCPELRNI---PWRCVVIDEAHRL---KNRNCKLLEGLKMM--DLEHKVLLTGTPLQN 1139 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 +E F+ L L+P+RF F++E + + + L L L E + E Sbjct: 1140 TVEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKL---QAILKPMMLRRLKEDV-E 1195 Query: 380 QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 +++ P + + + +++ +++++ T F + G P L + Sbjct: 1196 KNLAPKEETIIEV--ELTNIQKKYYRAILEKNFT----FLSKGGGQANVPN--LLNTMME 1247 Query: 440 LPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT 499 L ++G + P+ Q D + L Sbjct: 1248 LRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKA--- 1304 Query: 500 SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV 559 +VL+ LE L +R + R A F++ D+ V Sbjct: 1305 --GGHRVLIFSQMVRCLDILEDYLIQRR-YPYERIDGRVRGNLRQAAIDRFSKPDSDRFV 1361 Query: 560 -LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ 618 LLC+ G G N A ++FD +NP Q R RIGQ+ ++I+ + + Sbjct: 1362 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYE 1421 Query: 619 SVLVRWYHEGLDAFEHTCPTGRTI------YDSVYNDLINYLASPDQTEGFDDLIKNCRE 672 + L + + + I L D + Sbjct: 1422 REMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSK 1481 Query: 673 QHEALKAQLEQGRDRLLEIHSNGG 696 E Q+ R + I S G Sbjct: 1482 FCEEDIDQILLRRTHTITIESEGK 1505 >UniRef50_D2YSY0 RNA polymerase-associated protein rapA n=1 Tax=Vibrio mimicus VM573 RepID=D2YSY0_VIBMI Length = 253 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 135/252 (53%), Positives = 199/252 (78%) Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQ 775 + FA++LFD IG++Q+DRG+N +V+TP++HM+VP +PGL +G TITFDR+ AL+RED Sbjct: 1 MTFALSLFDAIGLHQEDRGENALVVTPAEHMMVPSYPGLPYEGATITFDRDTALSREDMH 60 Query: 776 FITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRF 835 FI+WEHP+++ G+DL++S G+ +SLLKNKALPVGT+L+EL+YVV+AQAPK+ ++RF Sbjct: 61 FISWEHPMVQGGIDLLMSEGVGTCAVSLLKNKALPVGTILLELVYVVDAQAPKRSGISRF 120 Query: 836 LPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQI 895 LP +P+R+L+D GN+L++QVEFE+FNRQL+ VNRH SKLV++VQ DVH ++ EA + Sbjct: 121 LPVSPIRILMDARGNDLSSQVEFESFNRQLSPVNRHLASKLVSSVQHDVHRLITASEAAV 180 Query: 896 EKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGW 955 E A+ + A+ + + L++EL RL AL+AVNPNIRD+E+ +E +++ + QA + Sbjct: 181 EPRVSAIREQAQRDMQQSLNSELERLLALKAVNPNIRDEEIEVLEQQIKELTGYIAQAQY 240 Query: 956 RLDALRLIVVTH 967 +LD+LRLIVV H Sbjct: 241 QLDSLRLIVVAH 252 >UniRef50_B7Z002 Kismet, isoform C n=2 Tax=Fungi/Metazoa group RepID=B7Z002_DROME Length = 5517 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 97/512 (18%), Positives = 182/512 (35%), Gaps = 46/512 (8%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVGLGKTIEAGMILHQQLLSGAAERVL 204 + SL P+QL + + +LADE+GLGKTI++ +H G L Sbjct: 2022 VYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFL 2081 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD------------TEQLV 252 +I P + W E ++ ++ ++ Y + ++ Sbjct: 2082 VIAPLSTIPNWQREFEGWTDMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVL 2141 Query: 253 ICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLL 312 I + + L+ W L V+DEAH L ++ + + + QL ++ +LL Sbjct: 2142 ITTFEMIVTDYMDLKAF---NWRLCVIDEAHRL---KNRNCKLLEGLRQL--NLEHRVLL 2193 Query: 313 TATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA--VAMLLAGNKLSNDEL 370 + TP Q + F+ L L+P++F +F+ E + R + + LL L + Sbjct: 2194 SGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKD 2253 Query: 371 NMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPK 430 ++ + +++ ++ N + + ++ S L + GT+ N N + K Sbjct: 2254 DVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL--KKGTTSANIPNLMNTMMELRK 2311 Query: 431 RELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPR 490 +H L + Q G PE Y+ D Sbjct: 2312 CCIHPYLLNG-AEEQIQYDFKSQHGED------------PESYYKNLILSAGKMVLIDKL 2358 Query: 491 VEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF 550 + L +VL+ LE L R+ + R A + Sbjct: 2359 LPKLKA-----NGHRVLIFSQMVRCLDILEDYLVYRK-YPFERIDGRIRGNLRQEAIDRY 2412 Query: 551 AEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 ++ + V LLC++ G G N A ++++D +NP Q R RIGQ ++I+ Sbjct: 2413 SKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIY 2472 Query: 610 VPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT 641 T + + L + + T Sbjct: 2473 RLLCRNTYEREMFDKASMKLGLDKAVLQSMNT 2504 >UniRef50_UPI00006A0EF1 Chromodomain-helicase-DNA-binding protein 8 (EC 3.6.1.-) (ATP- dependent helicase CHD8) (CHD-8) (Helicase with SNF2 domain 1). n=3 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A0EF1 Length = 2021 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 106/594 (17%), Positives = 202/594 (34%), Gaps = 50/594 (8%) Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQR-----TSLIPHQLNIAHDVGRRHAPR 172 G+I+ R R K + + L R L +QL + + R Sbjct: 488 GKIEEFKRIEARQPNLKRVARPAATSWKKLELSREYQNGNQLREYQLEGVNWLLFNWYNR 547 Query: 173 --VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 +LADE+GLGKTI++ L + G L+I P + W E + ++ Sbjct: 548 QNCILADEMGLGKTIQSITFLQEVYNVGIRGPFLVIAPLSTITNWEREFGSWTQMNTIVY 607 Query: 231 DDERYAEAQHDAYNPF------------DTEQLVICSLDFARRSKQRLEHLCEAEWDLLV 278 + Y + +I + + L E EW ++ Sbjct: 608 HGSLASRQMIQQYEMYCKDSKGRLIPGAYKFDALITTFEMVLSD---CPELREIEWRCVI 664 Query: 279 VDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHD 338 +DEAH L ++ + +++ + + +LLT TP Q +E F+ L L+P +F Sbjct: 665 IDEAHRL---KNRNCKLLDSLKHM--DLEHKVLLTGTPLQNTVEELFSLLHFLEPTQFSS 719 Query: 339 FAQFVEEQKNYR--PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDA 396 A+F+++ + + + +L L + ++ + +Q+ ++ N + Sbjct: 720 EAEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYY 779 Query: 397 QSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGA 456 ++ ++ S L T NT N L + L ++G Sbjct: 780 RAILEKNFSFL-----TKGASQSNTPN---------LLNTMMELRKCCNHPYLITGAEEK 825 Query: 457 RKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATA 516 S A ++ P+ Q + D + L KVL+ Sbjct: 826 IISEFREATPVVPPDFHVQAMVRSSGKLVLIDKLLPKLRA-----GGHKVLIFSQMVRCL 880 Query: 517 LQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFA 575 LE L +R + R A F+ D+ V LLC+ G G N A Sbjct: 881 DILEDYLIQRR-YLYERIDGRVRGNMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAA 939 Query: 576 SHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHT 635 ++FD +NP Q R RIGQ+ ++I+ + + + L + Sbjct: 940 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAV 999 Query: 636 CPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLL 689 + + + + + + ++ + E+ D++L Sbjct: 1000 LQSMSGRDNHLSGPIQQFTKKEIEDLLRKGAYAAIMDEDDEGSKFCEEDIDQIL 1053 >UniRef50_Q9VPL9 Kismet, isoform A n=10 Tax=Sophophora RepID=Q9VPL9_DROME Length = 5322 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 95/512 (18%), Positives = 185/512 (36%), Gaps = 46/512 (8%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVGLGKTIEAGMILHQQLLSGAAERVL 204 + SL P+QL + + +LADE+GLGKTI++ +H G L Sbjct: 2022 VYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFL 2081 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD------------TEQLV 252 +I P + W E ++ ++ ++ Y + ++ Sbjct: 2082 VIAPLSTIPNWQREFEGWTDMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVL 2141 Query: 253 ICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLL 312 I + + L+ W L V+DEAH L ++ + + + QL ++ +LL Sbjct: 2142 ITTFEMIVTDYMDLKAF---NWRLCVIDEAHRL---KNRNCKLLEGLRQL--NLEHRVLL 2193 Query: 313 TATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA--VAMLLAGNKLSNDEL 370 + TP Q + F+ L L+P++F +F+ E + R + + LL L + Sbjct: 2194 SGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKD 2253 Query: 371 NMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPK 430 ++ + +++ ++ N + + ++ S L + GT+ N N + K Sbjct: 2254 DVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL--KKGTTSANIPNLMNTMMELRK 2311 Query: 431 RELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPR 490 +H L + + + +++ PE Y+ D Sbjct: 2312 CCIHPYLLNGAEE-------------QIQYDFKSQHGEDPESYYKNLILSAGKMVLIDKL 2358 Query: 491 VEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF 550 + L +VL+ LE L R+ + R A + Sbjct: 2359 LPKLKA-----NGHRVLIFSQMVRCLDILEDYLVYRK-YPFERIDGRIRGNLRQEAIDRY 2412 Query: 551 AEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 ++ + V LLC++ G G N A ++++D +NP Q R RIGQ ++I+ Sbjct: 2413 SKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIY 2472 Query: 610 VPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT 641 T + + L + + T Sbjct: 2473 RLLCRNTYEREMFDKASMKLGLDKAVLQSMNT 2504 >UniRef50_B4LU61 GJ17250 n=6 Tax=cellular organisms RepID=B4LU61_DROVI Length = 5552 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 99/536 (18%), Positives = 195/536 (36%), Gaps = 46/536 (8%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVG 180 R + R R + + ++ + + SL P+QL + + +LADE+G Sbjct: 2181 PLRCEWKSRKRPHPEQWKKLEKTPVYKSGNSLRPYQLEGLNWLKFSWYNSHNCILADEMG 2240 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTI++ +H G L+I P + W E ++ ++ ++ Sbjct: 2241 LGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHGSVTSKQMI 2300 Query: 241 DAYNPFD------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 Y + ++I + + L+ W L V+DEAH L Sbjct: 2301 QDYEFYYKTDSGKVLKEPIKFNVLITTFEMIVTDYMDLKAF---NWRLCVIDEAHRL--- 2354 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 ++ + + + QL+ + +LL+ TP Q + F+ L L+P++F +F+ E + Sbjct: 2355 KNRNCKLLEGLRQLS--LEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGS 2412 Query: 349 YRPVADA--VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSM 406 R + + +LL L + ++ + +++ ++ N + + ++ S Sbjct: 2413 LRTEEEVNKLQVLLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSF 2472 Query: 407 LMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARD 466 L + GT+ N N + K +H L + + + +A+ Sbjct: 2473 L--KKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEE-------------QIQYDFKAQH 2517 Query: 467 MLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLRER 526 PE Y+ D + L +VL+ LE L R Sbjct: 2518 GEDPESYYKNLILSAGKMVLIDKLLPKLKA-----NGHRVLIFSQMVRCLDILEDYLVYR 2572 Query: 527 EGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPF 585 + + R A +++ + V LLC++ G G N A ++++D + Sbjct: 2573 K-YPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDW 2631 Query: 586 NPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT 641 NP Q R RIGQ ++I+ T + + L + + T Sbjct: 2632 NPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNT 2687 >UniRef50_UPI000175F9EE PREDICTED: similar to chromodomain helicase DNA binding protein 6 n=4 Tax=Euteleostomi RepID=UPI000175F9EE Length = 2699 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 101/568 (17%), Positives = 197/568 (34%), Gaps = 54/568 (9%) Query: 153 SLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPET 210 L +QL + + R +LADE+GLGKTI++ L++ L G LII P + Sbjct: 246 QLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLYEIFLMGLRGPFLIIAPLS 305 Query: 211 LQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD------------TEQLVICSLDF 258 W E + ++ + + Y + Q VI + + Sbjct: 306 TITNWEREFRTWTEMNVIVYHGSQISRQMILQYEMYHRDEQGNIMSGEFKFQGVITTFEM 365 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 L+ + W +V+DEAH L ++ + + ++ + ++ +LLT TP Q Sbjct: 366 IMADCPELKKI---NWRCVVIDEAHRL---KNRNCKLLEGLKLM--NLEHKVLLTGTPLQ 417 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIG 378 +E F+ L L+P++F F+EE + + + +++ L ++ Sbjct: 418 NSVEELFSLLNFLEPSQFPSETTFLEEFGDLK---------------TEEQVKKLQAILK 462 Query: 379 EQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKL 438 +L+ D E + ++E + ++ + +R F + + + Sbjct: 463 ----PMMLRRLKDDVEKNLAPKEETIIE-VELTNIQKKYYRAILEKNFAFLAKGANQHNM 517 Query: 439 PLPTQYQTAIKVSGIMGAR-KSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGY 497 P ++ AE++ + + ++ + Sbjct: 518 PNLINTMMELRKCCNHPYLITGAEEKILESFRKTYSSDAADFQLQAMIQAAGKLVLIDKL 577 Query: 498 LTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDT 555 L KVLV LE L +R + R A F++ D+ Sbjct: 578 LPKLLAGGHKVLVFSQMVRCLDILEDYLIQRR-YTYERIDGRVRGNLRQAAIDRFSKVDS 636 Query: 556 GAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLE 614 V LLC+ G G N A ++FD +NP Q R RIGQ+ ++++ Sbjct: 637 DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR 696 Query: 615 KTAQSVLVRWYHEGLDAFEHTC------PTGRTIYDSVYNDLINYLASPDQTEGFDDLIK 668 + + + L + + + ++ + L D+ Sbjct: 697 NSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSKMEVEDLLRKGAYGALMDEE-D 755 Query: 669 NCREQHEALKAQLEQGRDRLLEIHSNGG 696 + E Q+ Q R + + I S G Sbjct: 756 EGSKFCEEDIDQILQRRTQTITIQSEGK 783 >UniRef50_A3NZZ0 SNF2-related:Helicase, C-terminal n=4 Tax=Burkholderiales RepID=A3NZZ0_BURP0 Length = 1045 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 192/1013 (18%), Positives = 358/1013 (35%), Gaps = 150/1013 (14%) Query: 39 ENRLYARSDSP--VTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVA 96 + + Y +P + V + D + ++ + E Sbjct: 8 QTQAYRARPAPGQLVEVR-RRQWVVADIDAAGLSFGLPTPQHCVTLSSIDEDGLGEELEV 66 Query: 97 LREVFLDSKLVFSKPQDRLFAGQIDR--MDRF--ALRYRARKYSSEQF-RMPYSGLRGQR 151 + E+ ++++ GQ D +D F A+R+ A + F + P+ Sbjct: 67 IWEIEPGAQVIERAGLPS-ITGQDDSDVLDAFLDAVRWGAATNADRGFLQAPFR----SG 121 Query: 152 TSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 S+ QL+ +L+AD+VGLGKT+EAG+++ + LL A VLI+ P +L Sbjct: 122 VSIEDFQLDPLVRAIDMARVNLLIADDVGLGKTVEAGLVIQELLLRHRARTVLIVCPASL 181 Query: 212 QHQWLVEMLRRFNLRFALFDDE---RYAEAQHDAYNPFDTEQLVICSLDFARRS---KQR 265 Q +W VEML +F L F + D + R + NP+ + +I S+D+A+ + Sbjct: 182 QEKWRVEMLEKFGLDFRVVDTDYIKRLRRERGIHTNPWTSHPRLITSMDWAKGGEGLRAM 241 Query: 266 LEHLCEA-----EWDLLVVDEAHHLVWSEDA----PSREYQAIEQLAEHVPGVLLLTATP 316 + L ++DLLVVDEAH++ S A S+ + + + H L LTATP Sbjct: 242 RDVLPPHVGHPRKFDLLVVDEAHNVAPSAGAHYALESQRTRFVRAIGPHFQHRLFLTATP 301 Query: 317 EQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEM 376 ES + L LLD RF A +L N+LS + L Sbjct: 302 HNGYTESFTSLLELLDDQRF------------------ARNILPDENRLSQVMIRRLKSD 343 Query: 377 IGEQDIEPLLQAANSDS-EDAQSARQELVSMLMDRHGTSRVL-FRNTRNGVK-GFPKREL 433 + + D PL + E +A + V +D + SR N NG F R L Sbjct: 344 LVDADGNPLYARRTLQALEVPYTAEEREVHRKLDDYCASREKDAENAGNGFGTAFVNRLL 403 Query: 434 HTIKLPLPTQYQTAIKV-----------------------------------SGIMGARK 458 L P + + ++ + A+ Sbjct: 404 KKRLLSSPAAFASTLEKHVTSLSEARPAKLDTMAERILHKAILKADEDYADDGDVENAQA 463 Query: 459 SAEDRARDMLYPERIYQEFEGDNATWW------NFDPRVEWLMGYLT-------SHRSQK 505 A + A P Q D+ W D + + ++ +L+ ++ Sbjct: 464 EAVEEATRRSIPLTPEQRATLDDLRAWAQRARNQADSKAQAILRWLSAYLKPDGQWNDRR 523 Query: 506 VLVICAKAATALQLEQVLRERE--GIRAAVFHEGMSIIERDRAAAWFAE--EDTGAQVLL 561 V++ T + Q+L G R + H G+S ER+ A F +D+ ++LL Sbjct: 524 VILFTEYRTTHQWMHQILASHGFGGERLGLLHGGLSQEEREPIKAAFQASPQDSPVRILL 583 Query: 562 CSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQA-HDIQIHVPYLEKTAQ- 618 ++ SEG + Q + ++ ++P+NP+++EQR GR+DR GQ ++ I P A Sbjct: 584 ATDAASEGIDLQNHCNRLIHLEIPYNPNVMEQRNGRIDRHGQREKEVLIWHPVDGGGANG 643 Query: 619 -------SVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLIN---YLASPDQTEGFDDLIK 668 ++R LD+ + + + LI E K Sbjct: 644 ASVGGLGEDILRAL-RKLDSMRADMGSVNPVIAPQMSGLIEGSLKDLDTRLAEARIARAK 702 Query: 669 NCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIE---EQDDDTNLIAFAMNLFDI 725 N LK ++ + +RLL + + +++ L + Sbjct: 703 NFVRAERELKERVAKLHERLLTTKQDFHLTPDHVLMAVKTGLSLAGRPPLEPVELAGAPS 762 Query: 726 IGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGI----TITFDREVALAREDAQFITWEH 781 + + GL ITFD +A R+D + H Sbjct: 763 GSVFRMPALSGSW---------ARCLQGLRHPHTQKIRPITFDHAIASGRDDVVLVHLNH 813 Query: 782 PLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPV 841 L++ L L+ + ++ + + + + P + ++R + Sbjct: 814 RLVQMCLRLLRAE-------IWARDDVKKLHRVTIRTMPDALVDGPAVVVVSRLVVTGGN 866 Query: 842 RMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQ--DVHAILQLGEAQIEKSA 899 L + + ++F R+ V R + ++ + + + ++ Sbjct: 867 HHRLHEELTVSGGYLRDQSFRRE-EGVTR--VQQWLDESKPITAAPPLFDALRVRFDRQQ 923 Query: 900 RALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQ 952 A++ A + RL L + E+ I + ++ +++ Sbjct: 924 EAILKAVDARSK-------ERLRYLTNTLQTRKQQEIEDIGTVLDELEKAIQS 969 >UniRef50_UPI0001C15DBC ATP-dependent helicase n=1 Tax=Cylindrospermopsis raciborskii CS-505 RepID=UPI0001C15DBC Length = 961 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 156/844 (18%), Positives = 317/844 (37%), Gaps = 110/844 (13%) Query: 144 YSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERV 203 Y G R +L +QL+ + R+L+AD VGLGKT+E G+++ + + R+ Sbjct: 98 YVGHRAAMDTLK-YQLSPTSMALKMLRQRMLIADGVGLGKTLECGVLVAELIARHRGRRI 156 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDD---ERYAEAQHDAYNPFDTEQLVICSLDFAR 260 L++ +++ Q+ E RF + D +R +NPF I S+D + Sbjct: 157 LVVTSKSMMAQFQKEFWFRFTIPLVRLDSTEVQRIKSIIPTNHNPFYYYDRTIISIDTLK 216 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHL--VWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 + ++ +L +A WD++++DEAH++ + S + +L++ ++LL+ATP Sbjct: 217 QDREYRNYLEKANWDIIIIDEAHNVAKRGRGEDNSLRSKLALRLSKRSDTLILLSATPHD 276 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIG 378 +S + + +LDP D + + + D + L + D L L + + Sbjct: 277 GKPQSFASLMNMLDPTAIADESDYTK---------DDIRNLYI-RRFKKDVLADLQDNVP 326 Query: 379 EQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKL 438 E+D + + A+ E L ++ D+ LF+ T K L + K Sbjct: 327 ERDSQSIDTPASESEERVFDLLDNL-NLSSDKQLRGGQLFKTT------LLKSILSSHKA 379 Query: 439 PLPTQYQTAIKVS-GIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGY 497 L T K+ G S E+ D+ + + Q + + + L+ Sbjct: 380 CLATVNNRLKKLKEGNKKNPGSGENHRADIEALQELQQSLGEVGKEDF---SKYQRLLKL 436 Query: 498 LT-------SHRSQKVLVICAKAATALQLEQVLREREGIRA---AVFHEGMSIIERDRAA 547 + ++++ + T L L++ +++ MS ++ Sbjct: 437 IKQDLRWNGEDSGDRLVIFTGRLETLDFLFTELQKDLKLKSGSILKLKGDMSDTQQLEVV 496 Query: 548 AWFAEEDTGAQVLLCSEIGSEGRNFQFASH-MVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 F++E ++LL +E+ SEG N + SH ++ FD+P++ L+QR GR+DR GQ+ Sbjct: 497 EQFSKEKDPVRILLATEVASEGINLHYLSHRLIHFDIPWSFMTLQQRNGRIDRYGQSKKP 556 Query: 607 QIHVPYLEKTA-----QSVLVRWYHEGLDAFEHTCPTGRTIYDSV-----YNDLINYLAS 656 +I +++ + + N + + + Sbjct: 557 EIRYLLTRSRRTKMDEVDRIIKVLLAKEEQATKNIGDPAILIGVFNAQEEENYISDVIEQ 616 Query: 657 PDQTEGFDDLIKNCREQHE-ALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 E FD +++N +Q E L E + E + + + L E+ + Sbjct: 617 GKTAEEFDSMLENNNKQEEGGLFDWFENDQ----EDDYSSSPEPEELCETGSLLSLFDST 672 Query: 716 IAFAMNLF--DIIGINQDDRGDNMIVLTPS-DHMLVPDFPGLSEDGIT-------ITFDR 765 F DI+ + + + + L + L + I +T Sbjct: 673 FDFVSTALGSDIVNVTNLNINQQVRFIELQLPDELRSRYKRLPREIIPEPKDLLYLTDSP 732 Query: 766 EV-----ALARE-----DAQFITWE-HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTL 814 +V A AR+ + WE HPL+ D L + +++A Sbjct: 733 QVIKKEIADARQKEKQWSMKQYLWELHPLVEWLTDRCL--------FHIPRHQAP----- 779 Query: 815 LVELIYVVEAQAPKQL------------QLNRFLPPTPVRMLLDKNGNNLAAQVEFETFN 862 V++ + K+ Q + + +++D N + Sbjct: 780 ------VIQLPSDKKTLTFICFGSFSNRQGSPIISRQ-FSVIVDHNNSYRIEDFAETIKK 832 Query: 863 RQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLE 922 LN + G+ ++ V + +++ G+ +EK + + +E+++ E RL Sbjct: 833 VGLNKPIPNPGNIDISEVSSFLKEVVKKGQEYLEKERKTVQQE----LNERIAKEKGRLN 888 Query: 923 ALRA 926 LR Sbjct: 889 DLRQ 892 >UniRef50_A9TQR2 SNF2 family chromodomain-helicase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TQR2_PHYPA Length = 1677 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 104/559 (18%), Positives = 200/559 (35%), Gaps = 48/559 (8%) Query: 145 SGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQL-LSGAAE 201 +G+ L +Q + R +LADE+GLGKTI++ +L Sbjct: 532 AGVFKDGRRLRDYQEAGVAWLDHNFKNRTNCILADEMGLGKTIQSVAMLENLRTKRKIRG 591 Query: 202 RVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD--------TEQLVI 253 L++ P + W E+ ++ ++ + Y + +++ Sbjct: 592 PFLVVAPVSTLGHWRREVESATDMNCVVYTGNQEDRQIIRNYEFYYGDGNSSELKFNILL 651 Query: 254 CSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLT 313 S + + + + L W ++VDEAH L + S+ QA+ QL G+LLLT Sbjct: 652 TSFEILMKDQNK---LARETWQYIIVDEAHRL---KSRESKTAQALRQLRVRHGGLLLLT 705 Query: 314 ATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNML 373 TP Q + F+ L LLD N F F+ + + + A ++ + + N+L Sbjct: 706 GTPVQNNTKELFSLLYLLDRNEFDSEEDFLLKYGDIK----------AAEQIKDLQDNIL 755 Query: 374 GEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT-RNGVKGFPKRE 432 LL+ D E + ++E+ + ++ R +R N + K Sbjct: 756 R--------PRLLRRMKEDVEKSIPMKEEVTIVWVELTKEQRAFYRAIYENNISTLLK-- 805 Query: 433 LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNAT---WWNFDP 489 +I +P+ A+++ + + +++ R + N Sbjct: 806 -GSIATNMPSLRNVAMELRKLCNHPFLCDGLEESIVFKHRSLNDGNASNLAETLLSQSSG 864 Query: 490 RVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAA 547 ++ + L + ++VL+ LE L + G + +R A Sbjct: 865 KMVLVDKLLPKLKEAGRRVLIFSQFTMMLDLLEDYLLSK-GYSYERIDGKIRGSDRQAAI 923 Query: 548 AWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 ++ +D+ V LL + G G A +++D +NP Q + R RIGQ D+ Sbjct: 924 DRYSAKDSSIFVFLLSTRAGGLGITLTAADTCIIYDSDWNPQNDLQAMARCHRIGQTKDV 983 Query: 607 QIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP--TGRTIYDSVYNDLINYLASPDQTEGFD 664 +I+ T + L E G + ++ + L D Sbjct: 984 KIYRLITRNTYEQRLFECSSRKYGLDEAILGNRMGVDVTQDHNKNIESLLKHGAYDILKD 1043 Query: 665 DLIKNCREQHEALKAQLEQ 683 D + ++ LEQ Sbjct: 1044 DGEAASEFSSQNIEQILEQ 1062 >UniRef50_Q29NV9 GA17619 n=5 Tax=Eukaryota RepID=Q29NV9_DROPS Length = 5605 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 96/512 (18%), Positives = 184/512 (35%), Gaps = 46/512 (8%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVGLGKTIEAGMILHQQLLSGAAERVL 204 + SL P+QL + + +LADE+GLGKTI++ +H G L Sbjct: 2131 IYKGGNSLRPYQLEGLNWLKFSWFNTHNCILADEMGLGKTIQSLTFVHSVYEFGIRGPFL 2190 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD------------TEQLV 252 +I P + W E ++ ++ ++ Y + ++ Sbjct: 2191 VIAPLSTIPNWQREFEGWTDMNIVVYHGSVTSKQMIQDYEFYYKTDSGKVLKEPIKFNVL 2250 Query: 253 ICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLL 312 I + + L + W L V+DEAH L ++ + + + QL ++ +LL Sbjct: 2251 ITTFEMIVTD---YMDLKQFNWRLCVIDEAHRL---KNRNCKLLEGLRQL--NLEHRVLL 2302 Query: 313 TATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA--VAMLLAGNKLSNDEL 370 + TP Q + F+ L L+P +F +F+ E N R + + LL L + Sbjct: 2303 SGTPLQNNISELFSLLNFLEPAQFSSQEEFMTEFGNLRNEEEVNKLQALLKPMMLRRLKD 2362 Query: 371 NMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPK 430 ++ + +++ ++ N + + ++ S L + GT+ N N + K Sbjct: 2363 DVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL--KKGTTSANIPNLMNTMMELRK 2420 Query: 431 RELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPR 490 +H L + + + +++ PE Y+ D Sbjct: 2421 CCIHPYLLNGAEE-------------QIQYDFKSQHGEDPESYYKNLILSAGKMVLIDKL 2467 Query: 491 VEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF 550 + L +VL+ LE L R+ + R A + Sbjct: 2468 LPKLKA-----NGHRVLIFSQMVRCLDILEDYLVYRK-YPFERIDGRIRGNLRQEAIDRY 2521 Query: 551 AEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 ++ + V LLC++ G G N A ++++D +NP Q R RIGQ ++I+ Sbjct: 2522 SKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIY 2581 Query: 610 VPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT 641 T + + L + + T Sbjct: 2582 RLLCRNTYEREMFDKASMKLGLDKAVLQSMNT 2613 >UniRef50_A1W7Y8 Helicase domain protein n=6 Tax=Proteobacteria RepID=A1W7Y8_ACISJ Length = 1046 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 188/990 (18%), Positives = 352/990 (35%), Gaps = 122/990 (12%) Query: 52 RVMFNPGDTITSHDGWQMQVEEVKE---------ENGLLTYIGTRLDTEESGVALREVFL 102 R PG + Q V +V +N + E + E+ Sbjct: 13 RTRPEPGQLVEVRR-RQWVVADVASSKLESASASQNCVTLSSIDEDGLGEELEVIWEIEP 71 Query: 103 DSKLVFSKPQDRLFAG-QIDRMDRF--ALRYRARKYSSEQF-RMPYSGLRGQRTSLIPHQ 158 ++++ + D ++ F A+R+ A + F + P+ S+ Q Sbjct: 72 GAQVIERAGLPSITGQDHSDTLEAFLDAVRWGAATNADRGFLQAPFR----SGVSIEDFQ 127 Query: 159 LNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE 218 L+ +L+AD+VGLGKTIEAG+++ + LL A VLII P +LQ +W +E Sbjct: 128 LDPLVRAIDMARVNLLIADDVGLGKTIEAGLVIQEMLLRHRARTVLIICPASLQEKWRIE 187 Query: 219 MLRRFNLRFALFDDERYAEAQHDA---YNPFDTEQLVICSLDFARR---SKQRLEHLCEA 272 ML +F L F + D + + + NP+ + +I S+D+ + + + L Sbjct: 188 MLEKFGLDFRVVDTAYIKQLRRERGIHANPWTSHPRLIASMDWVKSGEGLRAMRDVLPPH 247 Query: 273 -----EWDLLVVDEAHHLVWSEDA----PSREYQAIEQLAEHVPGVLLLTATPEQLGMES 323 ++DLLVVDEAH++ + A S+ + I ++ H L LTATP ES Sbjct: 248 AGHPRKFDLLVVDEAHNIAPAAGAHYALESQRTRFIRAISPHFQHRLFLTATPHNGYTES 307 Query: 324 HFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL--AGNKLSNDELNMLGEMIGEQD 381 + L LLD RF E+Q + + + L+ G L + + Sbjct: 308 FTSLLELLDDQRFARNILPDEKQLSQVMIRRLKSDLVDADGKPLYAQRKLQALAVPYTDE 367 Query: 382 IEPLLQAANSDSEDAQSARQE---------LVSMLMDRHGTSRVLFRNT----------- 421 + Q N + ++ + +L R +S F +T Sbjct: 368 EREIHQKLNDYCASREKDAEKTGSTFGTSFVNQLLKKRLFSSPAAFASTLEKHVASLSNG 427 Query: 422 --RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 G +R L L Y +V R L E+ Q Sbjct: 428 AKPKGRDAMAERILRKAILKADEDYANDQEVENAQSEAVEEASRRSQPLTQEQ--QRILA 485 Query: 480 DNATWW-----NFDPRVEWLMGYLT-------SHRSQKVLVICAKAATALQLEQVLRER- 526 D W D + ++ +L+ ++V++ T + ++L Sbjct: 486 DLRQWAQRAKNQTDSKARAILDWLSANLKPGGQWNDRRVILFTEYRTTHQWMHEILASHG 545 Query: 527 -EGIRAAVFHEGMSIIERDRAAAWFA--EEDTGAQVLLCSEIGSEGRNFQ-FASHMVMFD 582 G R + H G++ ER+ A F +D+ ++LL ++ SEG + Q + ++ + Sbjct: 546 FGGERLGLLHGGLTQDEREPIKAAFQASPKDSPVRILLATDAASEGIDLQNHCNCLIHLE 605 Query: 583 LPFNPDLLEQRIGRLDRIGQA-HDIQIHVPYLEKTAQ--------SVLVRWYHEGLDAFE 633 +P+NP+++EQR GR+DR GQ ++ I P ++R L++ Sbjct: 606 IPYNPNVMEQRNGRIDRHGQREKEVLIWHPVDGGDKSHASVGGHGDDILRAL-RKLESMR 664 Query: 634 HTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQH---EALKAQLEQGRDRLLE 690 + + + LI T + I R LK ++ + +RLL Sbjct: 665 ADMGSVNPVIAPQMSGLIEGSLKDLDTRLAEAKIAKARRFVRAERELKERVAKLHERLLA 724 Query: 691 IHSNGGEKAQALAESIE---EQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHML 747 + + +++ L A+ D + + P Sbjct: 725 TQQDFHLTPDHIQMAVKTGLALAGRPPLEPVALA---------DAPQGSAFRMPPLSGSW 775 Query: 748 VPDFPGLSEDGI----TITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISL 803 GL ITFD VA R+D + H L++ L L+ + Sbjct: 776 ARCLEGLRHPHTQQIRPITFDHAVAKGRDDVVLVHLNHRLVQMCLRLLRAE-------VW 828 Query: 804 LKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNR 863 ++ + + V + + P + ++R ++ N + L ++ Sbjct: 829 AQDDVKKLHRVTVRTLPDGSIEGPAVVVISRL-------VITGGNHHRLHEELTVSGGYL 881 Query: 864 QLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELS-RLE 922 + + R G V + + + + R D A+ + + A RL+ Sbjct: 882 RDQSFRREEGVTRVQQWLDEAQPV--TASDSLLDAIRVRFDRAQPAILQAVDARSKDRLK 939 Query: 923 ALRAVNPNIRDDELTAIESNRQQVMESLDQ 952 L + E+ I + ++ +++ Sbjct: 940 FLANTLQTRKQQEMDDIGTVLDELEKAIQS 969 >UniRef50_B7XJ60 SWF/SNF family helicase n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XJ60_ENTBH Length = 1176 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 113/620 (18%), Positives = 215/620 (34%), Gaps = 41/620 (6%) Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEV 179 +M + R S+Q + S + +L P+QL + + R R ++ADE+ Sbjct: 228 KMRHTSWPIDWRPDKSQQIKYTESYVYKNNNTLRPYQLEGINWLMNRWYWRQSCIMADEM 287 Query: 180 GLGKTIEAGMILHQQLLS-GAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDE---RY 235 GLGKT+++ + V++I P + W E NLR + R Sbjct: 288 GLGKTVQSVCFIEALSREFNYNHPVIVIAPLSTIVHWEREFAAWTNLRVLTYHGSIQGRD 347 Query: 236 AEAQHDAYNP-----FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 +++ N +++ + + + EHL + E+ + ++DEAH L ++ Sbjct: 348 ILVEYEFTNKTGNINVRLFDVILTTYEMVMAGQ---EHLSQFEYSVSIIDEAHRL---KN 401 Query: 291 APSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQK-NY 349 S+ +++ L + +LLT TP Q + +A +D RF+ F++E K N Sbjct: 402 PNSKAAKSLRLL--KINHKVLLTGTPIQNNLAELWALFNFIDSQRFNSLDNFLKEYKLNN 459 Query: 350 RPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMD 409 D + LL L + ++ + +++ ++ + ++ ++ L Sbjct: 460 SKDVDKLQALLKPLMLRRMKEDVETSIPAKEETIIEVELTIAQKRYYRAILEKNFEFLQS 519 Query: 410 RHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY 469 + N N + K +H L + + + D L Sbjct: 520 NSKKNVP---NLINAMMELRKCCIHPYLLKGAEETIVRDYLQRKKINVRVNVDNMLHSLG 576 Query: 470 PERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGI 529 + YQ + D + KVL+ L + L R+ Sbjct: 577 EDLYYQILIQSSGKLVLLD------KLLVKLQGKHKVLIFSQMTKCLDLLSEYLSYRK-F 629 Query: 530 RAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDL 589 + + R A F+ ED+ LLC+ G G N A ++FD +NP Sbjct: 630 KYERIDGSIRGDLRQAAIDRFSTEDS-FVFLLCTRAGGVGINLTAADTCIIFDSDWNPQN 688 Query: 590 LEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYND 649 Q R RIGQ + ++I+ + + + + L + + D Sbjct: 689 DLQAQARCHRIGQKNQVKIYRLVTKNSYEREMFDKAGMKLGLDKAVLQKMSFMEGENAKD 748 Query: 650 L----------INYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKA 699 + I L D + E Q+ + R R++ G + Sbjct: 749 ISEKDINKGDAIQMLLRKGAYGVLMDQEDEEDKFCEEDIDQILERRTRIIRHEEGGNVFS 808 Query: 700 QALAESIEEQDDDTNLIAFA 719 +A + EE DD Sbjct: 809 KATFQVEEEVDDPLFWDNLL 828 >UniRef50_Q8NSD7 Superfamily II DNA/RNA helicases, SNF2 family n=1 Tax=Corynebacterium glutamicum RepID=Q8NSD7_CORGL Length = 962 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 192/975 (19%), Positives = 341/975 (34%), Gaps = 126/975 (12%) Query: 55 FNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQD- 113 +PG TI D + + +G D A LD L P Sbjct: 13 LSPGVTIEVRDEIWLVTHVTRSTDGFRVKARGLSDYVRDHEATFFTALDKDLKVIDPTQV 72 Query: 114 --RLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRR--H 169 L R R L RK ++ S + +QL Sbjct: 73 TVSLDDSSNYRRTRLWLEATMRKTPVPLYQESLSVADQMLADPLEYQLAAVRKTLSSANL 132 Query: 170 APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFAL 229 PRVL+AD VGLGKT+E GMIL + + G ER+L++ P + Q+ EM RF + Sbjct: 133 RPRVLIADAVGLGKTLEMGMILAELIRRGRGERILVVTPRHIMEQFQQEMWTRFAIPLVR 192 Query: 230 FDDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLV 286 D + + + NPF VI S+D + K R + L + WD +V+DE H Sbjct: 193 LDSVGIQQVRQKLPASRNPFTYFPRVIVSMDTLKSPKYRAQ-LEKVHWDAVVIDEIH--- 248 Query: 287 WSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ 346 + +A ++ + LA ++L +ATP ES LRLLDP E Sbjct: 249 NATNAGTQNNELARTLAPTAEALILASATPHNGDPESFKEILRLLDPTAVMPDGTIDAE- 307 Query: 347 KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSM 406 A +++ ++ S + +GE ++ A S E+ +A EL + Sbjct: 308 -------AAQRLIIRRHRNSPEVSGFVGEKWAPRNEPQNFLVAASKEENGVAA--ELNHV 358 Query: 407 LMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARD 466 + ++ + + FP L L P + + + A E RA + Sbjct: 359 WISPGASNPI-------KDRLFPW-TLVKAFLSSPAALGETV-SNRLKKASAPEEKRALE 409 Query: 467 MLYPERIYQEFEGDNATWWNFDPRVEWLMGYL-----TSHRSQKVLVICAKAATALQLEQ 521 L + ++A + + L+ YL + +V++ + AT L++ Sbjct: 410 TLS--------QLNSAITPQTSQKYQSLLSYLGDIGVKKNSDTRVVIFSERVATLHWLQE 461 Query: 522 VLREREGI---RAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQF-ASH 577 L + AV H G+ E+ R F + D+ ++++ ++ SEG N + Sbjct: 462 NLIRDLKMPPNSIAVMHGGLPDQEQMRLVDEFKKTDSPIRIMITGDVASEGVNLHTLCHN 521 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ---------SVLVRWYHEG 628 +V +D+P++ ++QR GR+DR GQ H+ I L+ L+ HE Sbjct: 522 LVHYDIPWSLIRIQQRNGRIDRYGQTHNPSIVTFLLDPAEDSKVGEVHVLERLMEREHEA 581 Query: 629 LDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEA---------LKA 679 + + + I + Q F+D + + E E L A Sbjct: 582 HSLLGDAASLMGKHSERLEEETIREVLRGAQN--FNDAVADPAEVLENPAGLDDIDWLLA 639 Query: 680 QLEQGRDRLL-------------EIHSNGGEKAQALAESIEEQDDDTNLIA----FAMNL 722 Q+ Q + + SN + AQ + E L+ + Sbjct: 640 QIAQADAKAETEAEAETENQTAPDAASNSTQHAQRRLYAQESSFLYDCLLEGFNNVPEDS 699 Query: 723 FDIIGINQDDRGDNMIVLTPSDHM--LVPDFPG-------LSEDGITI-TFDR-----EV 767 + G+ ++++ LTP+D + + P + ED + T R Sbjct: 700 INRGGVGFKKHDNDIVELTPTDDLRRRLDFLPQDYVAARKVKEDLLLASTLMRGQERLNA 759 Query: 768 ALARED------AQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLV-ELIY 820 A ED A ++ HP+ D ++ + +P + V E Sbjct: 760 ARTGEDGSTWPSAHYLGPLHPVTSWAADR---------ALATMPRSEIPAASGKVTEPTV 810 Query: 821 VVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAV 880 ++ + + R + +G + ++ + A+ Sbjct: 811 LLMSTLSNRRG------QIVSRSFVASSGPFDTEVLSDPIQWLHSIGLDETAINPGTAAL 864 Query: 881 QQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNI----RDDEL 936 D+ ++ L R L+ AAR +A ++ R EA R Sbjct: 865 PDDIEQLISLAVQAARGEIRPLMIAARAQAQTRVEHWAKRAEAWNNKRSGAASTSRTART 924 Query: 937 TAIESNRQQVMESLD 951 + +Q++ +L+ Sbjct: 925 AKLIEEQQKLSNALE 939 >UniRef50_A1U084 Helicase domain protein n=2 Tax=Bacteria RepID=A1U084_MARAV Length = 982 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 189/960 (19%), Positives = 339/960 (35%), Gaps = 134/960 (13%) Query: 96 ALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLI 155 + ++ + F DRL ++D +R + YS+ + + + T Sbjct: 30 GVDDLNRGHEAAFLTQLDRLK--EVDPRKTELVRDETKGYSTARLFLEAQLRQMPLTDPE 87 Query: 156 PH------------QLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERV 203 PH Q + ++ PR+LLAD+VGLGKTIE GMIL + + G +R+ Sbjct: 88 PHFEDMGAFTPMDYQKEAVYRALQQMRPRLLLADQVGLGKTIEVGMILSELIRRGQGQRI 147 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQ---HDAYNPFDTEQLVICSLDFAR 260 L++ +++ Q+ E+ RF L D + ++ Q + NPF+ +I S+D + Sbjct: 148 LVLAKKSMLTQFQAELWNRFALPLVRMDSDTLSKLQLKIPASKNPFEVYHRIIISIDTLK 207 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA-PSREYQAIEQLAEHVPGVLLLTATPEQL 319 + L WD++V+DEAH++ + Y+ +L+ ++L TATP Sbjct: 208 DIGRYAHFLENTRWDVVVIDEAHNVSGGTNPERHLSYRLARRLSRRTNSMILTTATPHNG 267 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 E+ + LLDP+ D E ++ P + D G E Sbjct: 268 KRETFGRLISLLDPSAVPDPKLQEYEAQDIAPFFLM--------RFKEDVKEEAGSNFSE 319 Query: 380 QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 + + L S+ + Q+L + R L + + + ++ L Sbjct: 320 RQVIHLPHTTVQASKAEEDVYQQLAHI--------RQLVLDKQIDAQAIVSWGMYKSFLS 371 Query: 440 LPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWL--MGY 497 P ++ + + +KS D E + + + F VE L MG+ Sbjct: 372 SPEACRSTAE-KRLAYLQKSDPDSREIEELEELLRRLEYLNVQQSARFQLLVEQLAAMGW 430 Query: 498 LTSHRSQKVLVICAKAATALQLEQVLREREGIR------------AAVFHEGMSIIERDR 545 S +S ++LV T L L + G A H GMS Sbjct: 431 DGSSKSPRLLVFTESRVTQEYLAPALAKHFGQSFSPKQEKQPEQTIAAIHGGMSDNALAA 490 Query: 546 AAAWFAEEDTGAQVLLCSEIGSEGRNFQF-ASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 A F ++ +++L +++ SEG N +++ +DLP++ L QR GR+DR GQ + Sbjct: 491 AVEAFGTGNSPVRLMLATDVASEGVNLHHQCHNIIHYDLPWSIITLIQRNGRIDRFGQKY 550 Query: 605 DIQIHVPYLEKTA-----QSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQ 659 I +E + S L ++ + TG ++ Sbjct: 551 PPIIRYLMVETESGLLEGDSELFSRLVSKVEEINRSTRTGESVLKLYDARKEEETFGDSL 610 Query: 660 TEGFDDLI------KNCREQHEALKAQLE---QGRDRLLEIHSNGGEKAQALAESIEEQD 710 +G L+ E LKA E Q L GGE + AE Sbjct: 611 VKGDTGLLDRETGEAETGELESTLKAANELAHQDYADFLSRMLGGGEPDEDEAEEAAANT 670 Query: 711 DDTNLI-----AFAMNLF----DIIGI---NQDDRGDNMIVLTPS------------DHM 746 D++ + F + + IG + + I+ TP D Sbjct: 671 DNSRIRLLDNGQFFEQGYRVLKEQIGGPDWHPLEHTGQQIIFTPPKELAKRLGAPWVDSE 730 Query: 747 LVPDFPGLSEDGITITFDREVALA----REDAQ---------------FITWEHPLIRNG 787 +V + E+ D+++ R D +T +HP+++ Sbjct: 731 MVYGASAMPEEAWP--DDQQLFFTDKPERVDLAIKAALAQKGQWSKELLLTEQHPVMQWL 788 Query: 788 LD-LILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLD 846 + L++ G + L+ + L G LL I V ++A L ++ R Sbjct: 789 AEKLMMLQKRGEA--PLIASPFLEPGELLFCFIGQVSSRAGTPLIVDPH--AVSFRKGGQ 844 Query: 847 KNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAA 906 L ++ F + N T + + L Q + L D Sbjct: 845 FQIRPLKEALDEVNFEQLANTGKTGT------LPDHLLKSFLGSAVDQSVTHLKKLKDQR 898 Query: 907 RNEADEKLSAELSRLEA------------LRAVNPNIRDDELTAIESNRQQVMESLDQAG 954 R + +L E +RL+ L + P R T + R+++ + L+ Sbjct: 899 RAQIRPRLDEENARLKHWFERWAERIDAQLANLPPEGRRA--TQLRQKREEMEKYLEDRR 956 >UniRef50_D0W197 Helicase/SNF2 domain protein n=3 Tax=Proteobacteria RepID=D0W197_NEICI Length = 943 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 170/912 (18%), Positives = 302/912 (33%), Gaps = 138/912 (15%) Query: 146 GLRGQRTSLIPHQLNIAHDVGRRH-APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVL 204 L + L PHQ++ A VLLADEVGLGKTIEAG++L Q R+L Sbjct: 28 ALFEAQVDLQPHQIDAALFALENPLREGVLLADEVGLGKTIEAGLVLCQLWAE-RNRRLL 86 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTE---QLVICSLDFARR 261 ++ P L+ QW E+ +F+L + D + + ++ Q+++ S +FA + Sbjct: 87 VVCPAALRKQWQAELREKFSLPSLVLDKAVLKQQNLSLTDFLTSQAGRQILVVSYEFAAK 146 Query: 262 SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGM 321 + W+L+V DEAH L + S++ Q + A LLL+ATP Q + Sbjct: 147 CAAE---INATGWNLVVFDEAHKLRNVYKSGSKQPQTLLN-AFAGSQKLLLSATPLQNSL 202 Query: 322 ESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML--LAGNKLSNDELNMLG----- 374 + LD + F +F + N + L L D L + Sbjct: 203 MEFYGLSLFLDEHLFGSKKEFQKCFINRGDTDELRTRLSPYVKRTLRKDVLEYIRYTRRH 262 Query: 375 EMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTS---RVLFRNTRNGVKGFPKR 431 + + + A D + + RH T R L ++ + G Sbjct: 263 TITQDYRLNDDEYALYIAVSDFLAKGESYALPKRQRHLTGLVLRKLLASSTPALSGTLDV 322 Query: 432 ELHTIKLPLPTQYQTAIKVSGIMGAR-------------KSAEDRARDMLYPERIYQEFE 478 + T ++ + + +G AE +L E + Sbjct: 323 IRQRLDTMQKTAHRPSESLFAALGEDLEDWEAFDDDENDGDAEPIDFKLLAAEISEMDGF 382 Query: 479 GDNATWWNFDPRVEWLMGYLTSH--------RSQKVLVICAKAATALQLEQVLREREGIR 530 +A D + + L+ L + + K ++ T L + L + Sbjct: 383 IKHARALTHDSKAQALLEALKTGLQKMQEAGAADKAVIFTESVRTQEYLFEFLSKNGYEG 442 Query: 531 AAVF---------------------------HEGMSIIERDRAAAWFAEEDTGAQVLLCS 563 V ++ +R F + A++++ + Sbjct: 443 QIVLFSGSNKHPDSQRRYKAWLDKNAGSPHHTGSPAVDKRTALIDAFKNQ---AKIMIAT 499 Query: 564 EIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPY-LEKTAQSVLV 622 E +EG N QF S ++ +DLP+NP +EQRIGR R GQ D+ + A ++ Sbjct: 500 ESAAEGVNLQFCSLLINYDLPWNPQRIEQRIGRCHRYGQKSDVVVINFLNTRNDADRRVL 559 Query: 623 RWYHEGLDAFEHTCPTGRTIYDSVYN---------DLINYLASPDQ-TEGFDDLIKNCRE 672 + F+ I + + ++ + +P+ FD L + Sbjct: 560 ELLTDKFKLFDGVFGASDEILGKISDGLDFEKRILEIYDTCRTPEAIQTAFDRLQQELES 619 Query: 673 QHEALKAQLEQGRDRLLEIHSNGGEKA--QALAESIEEQDDDTNLIAFAMNLFDIIGINQ 730 Q + + E+ RLLE L ++ E DD A Sbjct: 620 QIAETRKRAEE---RLLEYFDTDVHDRFKTRLQQTRERLDDFQRWFWLASRFALNNYAAF 676 Query: 731 DDRGDN-MIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITW--------EH 781 + + + P H+ + + L +D D AL R + W + Sbjct: 677 NPQSYRFDLKTAPEPHLHLGTYRLLKDD------DETAALHRPNTNLGQWCIAQCRNADT 730 Query: 782 PLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPV 841 P+ D I G IS+L G L VE I + +QA Sbjct: 731 PVAEITFDYI-GFKGGK--ISILAQNQGKSGWLSVEKI-KIHSQADT------------F 774 Query: 842 RMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARA 901 LL + ++ + + L + TG A L+ G + + Sbjct: 775 ETLLFTARTDDGEWLDNDFCQKLLLLGAKQTGRAQAVPSDITQSAELRRGSFFAQYQEQN 834 Query: 902 ---------LIDAARNEADEKLSAELSRLE----------ALRAVNP--NIRDDELTAIE 940 D + L EL ++ L ++++ +E Sbjct: 835 NHYYRERVLQFDRWAEDQKAALGDELEEVKIKIKNVKWERDLAQNTAELAQYEEKIRKLE 894 Query: 941 SNRQQVMESLDQ 952 ++++ +LD Sbjct: 895 QQKRRLRNTLDD 906 >UniRef50_Q9HCK8 Chromodomain-helicase-DNA-binding protein 8 n=26 Tax=Tetrapoda RepID=CHD8_HUMAN Length = 2581 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 106/592 (17%), Positives = 206/592 (34%), Gaps = 47/592 (7%) Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGL-----RGQRTSLIPHQLNIAHDVGRRHAPR 172 G+I R R+ K + + L R L +QL + + R Sbjct: 770 GKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNR 829 Query: 173 --VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 +LADE+GLGKTI++ L + G L+I P + W E + ++ Sbjct: 830 QNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVY 889 Query: 231 DDERYAEAQHDAYNPF------------DTEQLVICSLDFARRSKQRLEHLCEAEWDLLV 278 + Y + +I + + L E EW ++ Sbjct: 890 HGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSD---CPELREIEWRCVI 946 Query: 279 VDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHD 338 +DEAH L ++ + +++ + + +LLT TP Q +E F+ L L+P++F Sbjct: 947 IDEAHRL---KNRNCKLLDSLKHM--DLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPS 1001 Query: 339 FAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQS 398 ++F+ KN+ + + L L L E + E+++ P + + + Sbjct: 1002 ESEFL---KNFGDLKTEEQVQKLQAILKPMMLRRLKEDV-EKNLAPKQETIIEV--ELTN 1055 Query: 399 ARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARK 458 +++ +++++ F G L + L ++G + Sbjct: 1056 IQKKYYRAILEKN------FSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEE-KI 1108 Query: 459 SAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQ 518 E R + P + + +A ++ L+ L + KVL+ Sbjct: 1109 LTEFREACHIIPHDFHLQAMVRSAGKLVL---IDKLLPKLKAG-GHKVLIFSQMVRCLDI 1164 Query: 519 LEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASH 577 LE L +R + R A F++ D+ V LLC+ G G N A Sbjct: 1165 LEDYLIQRR-YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADT 1223 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP 637 ++FD +NP Q R RIGQ+ ++++ + + + L + Sbjct: 1224 CIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQ 1283 Query: 638 TGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLL 689 + D + + + E+ + E+ D++L Sbjct: 1284 SMSG-RDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEEDIDQIL 1334 >UniRef50_Q9Y620 DNA repair and recombination protein RAD54B n=36 Tax=Metazoa RepID=RA54B_HUMAN Length = 910 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 94/501 (18%), Positives = 197/501 (39%), Gaps = 43/501 (8%) Query: 152 TSLIPHQLNIAHDV-----GRRHAPRV--LLADEVGLGKTIEAGMILHQQLLSGA----- 199 L PHQ + G R R +LADE+GLGKT++ ++ G Sbjct: 294 YHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKP 353 Query: 200 -AERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFDTEQLVICSLD 257 ++ LI+ P +L + W E + R +F ++ + + + F ++I S + Sbjct: 354 VIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIF--YSVLIISYE 411 Query: 258 FARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPE 317 RS L+ + ++DLL+ DE H L +++ + A+ L+ ++LT TP Sbjct: 412 MLLRS---LDQIKNIKFDLLICDEGHRL---KNSAIKTTTALISLS--CEKRIILTGTPI 463 Query: 318 QLGMESHFARLRLLDPNRFHDFAQFVEEQKNY----RPVADAVAMLLAGNKLSNDELNML 373 Q ++ FA + ++P + + + + R + + G + + + + Sbjct: 464 QNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLT 523 Query: 374 GEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKREL 433 G I + E + + E+ R + + + R + + R ++G + Sbjct: 524 GLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQV---VRFCLQGLLENSP 580 Query: 434 HTIKLPLPTQ-YQTAIKVSGIMGARK--SAEDRARDMLYPERIYQEFEGDNATWW---NF 487 H I + + + + ++ S D+ + + + F D Sbjct: 581 HLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKE 640 Query: 488 DPRVEWLMGYL----TSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIER 543 +++ L L ++KV+++ T L++V +R G I +R Sbjct: 641 SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQEV-CKRHGYAYTRLDGQTPISQR 699 Query: 544 DRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 + F + + + LL S+ G G N SH++++D+ +NP Q + R+ R GQ Sbjct: 700 QQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQ 759 Query: 603 AHDIQIHVPYLEKTAQSVLVR 623 + + I+ T + + + Sbjct: 760 KYPVHIYRLLTTGTIEEKIYQ 780 >UniRef50_D2VNB4 Helicase-like protein n=1 Tax=Naegleria gruberi RepID=D2VNB4_NAEGR Length = 745 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 109/581 (18%), Positives = 203/581 (34%), Gaps = 40/581 (6%) Query: 136 SSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIEAGMILHQ 193 + L G T+L +QL + + + +LADE+GLGKTI+ + Sbjct: 183 QAALKYSQPKYLSG--TTLRDYQLKGVNWLISLYENGVNGILADEMGLGKTIQTIGLFCH 240 Query: 194 QLLSGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALF----DDERYAEAQHDAYNPFDT 248 G L++ P + W+ E+ + ++ L+ DD A++ + Sbjct: 241 LYEKGIKGPFLVVAPLSTVSNWVNEIDKWAPDIGCVLYHGNKDDRAIIRAKNFSKVKKGQ 300 Query: 249 EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPG 308 +V+ S + R K+ L + + W +VVDEAH L +RE + Sbjct: 301 IAVVVSSYEIVMRDKKFLAN--KFNWKYIVVDEAHRLKNFNCRLTRELKTYS-----SEN 353 Query: 309 VLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSND 368 LLLT TP Q + ++ L L P+ F D + F + + N + Sbjct: 354 RLLLTGTPLQNNLSELWSLLNFLLPSIFDDLSAFNKWFDFTKK---------EKNDYITN 404 Query: 369 ELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELV--SMLMDRHGTSRVLFRNTRNGVK 426 E L + LL+ SD + ++E + + + D + N Sbjct: 405 EKTQLISKLHNILRPFLLRRLKSDVDIGIPKKREFLIYTHMTDMQKE----YYNAVKSKD 460 Query: 427 GFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRA-RDMLYPERIYQEFEGDNATWW 485 P + + T +++ I + +D + F + Sbjct: 461 LLPIFKDQK-RANSTTLLNLLMQMRKICNHPFLLREFETKDSESESASNKRFLKECTQNS 519 Query: 486 NFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDR 545 + ++ L + KVL+ LE L R ++ ++ ER++ Sbjct: 520 GKFGLLVKMLENLKKN-GHKVLIFSLMTRFLDVLEDYLECRGDMKYCRIDGSIAQTEREQ 578 Query: 546 AAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD 605 F +++ LL + G G N A ++++D +NP + Q R RIGQ Sbjct: 579 KIKEFNQDEDVFCFLLSTRAGGLGINLTAADTVIIYDSDWNPQIDLQAQDRCHRIGQKRS 638 Query: 606 IQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDD 665 ++I T + +++ + L G ++ + A D Sbjct: 639 VRIFRLLTLGTVEKKVLQTATKKLKLERLIIHKGNFKGNTQQQSKMTITAQNLMEILDDT 698 Query: 666 LIKNCREQHEALKAQL------EQGRDRLLEIHSNGGEKAQ 700 + N + E + + E+G D L G E+A Sbjct: 699 QVNNDSKHDEGINDDILDRLINERGDDSTLPAAGVGYEEAH 739 >UniRef50_A8M878 Helicase domain protein n=2 Tax=Actinomycetales RepID=A8M878_SALAI Length = 956 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 176/947 (18%), Positives = 321/947 (33%), Gaps = 101/947 (10%) Query: 57 PGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLF 116 PG + D + + +GLL ++ + A LD R+ Sbjct: 14 PGSVVVIRDEEWLVQTAEETADGLLVHVRGLGELVRDVTASFCASLDHIAPLDPAAARVV 73 Query: 117 AGQIDRMDRFALRYRA--RKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APR 172 A R + L + RK + + + + +Q PR Sbjct: 74 ADDSPRYRKARLWLESTYRKTAVPLADRSLTVATQALATPLRYQQTAVRKALDPDNLRPR 133 Query: 173 VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD 232 +LLAD VGLGKT+E GMIL + + G ER+LI+ P + Q E+ RF L F D Sbjct: 134 ILLADAVGLGKTLEIGMILSELVRRGRGERILIVTPRHVLEQTQQELWSRFALPFVRLDS 193 Query: 233 ERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSE 289 + NPF + I S+D + S++ L + WD +V+DE+H+L Sbjct: 194 AGIQRVRQKLPANRNPFTYFRRAIISIDTLK-SERYAASLKKQRWDAVVIDESHNLA--- 249 Query: 290 DAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY 349 +A ++ + LA + ++L +ATP ES +RLLDP+ V Sbjct: 250 NAATQNNRLARTLARNTETMILASATPHNGRKESFAELVRLLDPSAIPPGGDLV------ 303 Query: 350 RPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMD 409 A+ +++ ++ S++ + +G E+ + A S +E+A + E V + Sbjct: 304 --AAEIERLVIRRHRHSDEVASAVGADWAERQEPENVLVAASRAENAVAREIEDVWLWP- 360 Query: 410 RHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY 469 R + + FP L L P I+ +A R L Sbjct: 361 --PDQRTPYSGQNASL--FPW-TLAKAFLSSPAALAETIRQRLARLGHDAAASREHAALN 415 Query: 470 PERIYQEFEGDNATWWNFDPRVEWLMGY-LTSHRSQKVLVICAKAATALQLEQVLREREG 528 + V L + S + +V + AT L + L G Sbjct: 416 -RLADLNAAALAEGSAKYAELVRRLQEIGVASGSPTRTVVFAERVATLTWLHKNLPADLG 474 Query: 529 IR---AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQF-ASHMVMFDLP 584 + A+ H G+ E+ + F +E +VL+ ++ SEG N H++ +D+P Sbjct: 475 LPAGAVAIMHGGLPDDEQQQIVDAFKQEHAAIRVLVTGDVASEGVNLHAQCHHLIHYDIP 534 Query: 585 FNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTA-----QSVLVRWYHEGLDAFEHTCPTG 639 ++ +EQR GR+DR Q +I L+ + ++ + + Sbjct: 535 WSLIRIEQRNGRIDRYRQRQPPRIIALLLDPDSGRFAGDIRILAKLVDKENEAHRALGDV 594 Query: 640 RTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKA 699 ++ D+ + + + E + A + + ++ + Sbjct: 595 ASLMGQY--DVKGEEDTIRAVLAGQRDLDDVVRMPEEVLAGDDLSAMFFGIVDADDDAET 652 Query: 700 QALAESIEEQDDD--TNLIAFAMNLFDIIGINQ------------DDRGDNMIVLTPSDH 745 L E+ + +++ ++ D LTP Sbjct: 653 APLPETTVTPGSGLYPDEVSYLEEALHAAFVDPTGPPSNNGVAWRRDAAFGTAELTPPPD 712 Query: 746 M--LVPDFPG--LSEDGIT------ITFDR-----EVALARE------DAQFITWEHPLI 784 + + P L++ +T T R E AL E DA ++ HP++ Sbjct: 713 LVQRLEVLPQSYLADRRVTERLVLATTLARGRNRMEQALCDETGSSWPDAHYLGPLHPVL 772 Query: 785 RNGLDLILSGDTGSSTISLLKNKALPVGTLLVELI------------YVVEAQAPKQLQL 832 D L+G G + + ++ LL+ + VE P L Sbjct: 773 DWASDRALAG-LGRNQVFAVRGGVYDPTVLLLGTLTNRRGQVVSAAWMTVEFPMPDTLS- 830 Query: 833 NRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTG-----SKLVNAVQQDVHAI 887 F P TP + A + F+T V + V + + + Sbjct: 831 --FAPVTP-----HPSAAAALAALGFDTARANPGPVPDAEALDRFIAPAVRHARAQMRDL 883 Query: 888 LQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDD 934 E + + ++ A + R L+ +I + Sbjct: 884 FAAAEKDVAHRVEQWSHR-LAQWQDEADALIQR-RDLKQRRVSIAQE 928 >UniRef50_Q3L8U1 Chromodomain-helicase-DNA-binding protein 9 n=47 Tax=Deuterostomia RepID=CHD9_HUMAN Length = 2897 Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats. Identities = 113/612 (18%), Positives = 215/612 (35%), Gaps = 70/612 (11%) Query: 93 SGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRT 152 V L ++ +L S+P R ++DR + + + Sbjct: 814 EDVDLAKIEEFEQLQASRPDTR----RLDRPPSNIWKKIDQSRDYKNGN----------- 858 Query: 153 SLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPET 210 L +QL + + R +LADE+GLGKTI++ L++ LL+G LII P + Sbjct: 859 QLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLS 918 Query: 211 LQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF------------DTEQLVICSLDF 258 W E ++ ++ + Y + Q +I + + Sbjct: 919 TIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEM 978 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 L + EW +++DEAH L ++ + + ++ + ++ +LLT TP Q Sbjct: 979 ILGGCGELNAI---EWRCVIIDEAHRL---KNKNCKLLEGLKLM--NLEHKVLLTGTPLQ 1030 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYR--PVADAVAMLLAGNKLSNDELNMLGEM 376 +E F+ L L+P RF + F++E + + + +L L + ++ ++ Sbjct: 1031 NTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKL 1090 Query: 377 IGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTI 436 +++ ++ N + ++ ++ S L G + V N N + K H Sbjct: 1091 APKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNV--PNLVNTMMELRKCCNHPY 1148 Query: 437 KLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMG 496 + GA + RD P + + ++ L+ Sbjct: 1149 LIK---------------GAEEKILGEFRDTYNPAASDFHLQAMIQSAGKL-VLIDKLLP 1192 Query: 497 YLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTG 556 + + KVL+ LE L + + R A F++ D+ Sbjct: 1193 KMKAG-GHKVLIFSQMVRCLDILEDYLI-HKRYLYERIDGRVRGNLRQAAIDRFSKPDSD 1250 Query: 557 AQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEK 615 V LLC+ G G N A ++FD +NP Q R RIGQ ++++ Sbjct: 1251 RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRN 1310 Query: 616 TAQSVLVRWYHEGLDA----------FEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDD 665 + + + L E + + DL+ A E D+ Sbjct: 1311 SYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDE 1370 Query: 666 LIKNCREQHEAL 677 K C E + + Sbjct: 1371 GSKFCEEDIDQI 1382 >UniRef50_UPI0001BC2D00 putative helicase n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2D00 Length = 1033 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 138/667 (20%), Positives = 250/667 (37%), Gaps = 65/667 (9%) Query: 53 VMFNPGDTITSHDGWQMQ--VEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVF-- 108 V PG + D + V+ V E +R L E+ D+ VF Sbjct: 26 VTLAPGSVVEVRDEEWLVTGVQTVYERANHQEVTPSRPVQRIEVQGLSELVRDTTAVFFD 85 Query: 109 -------SKPQDRLF-----AGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIP 156 P+ +G D L K ++ + G Sbjct: 86 SIDTVTPIDPRQAPLINDESSGYRDAKLW--LEATLMKTATAVEDTNLTVADGMLIDPKE 143 Query: 157 HQLNIAHDVG--RRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +Q + + PR+LLAD VGLGKTIE G+IL + + G +R+L++ P+ + Q Sbjct: 144 YQQTPVRKILDPQNLRPRILLADAVGLGKTIEIGLILAELIKRGRGDRILVVTPKHVLEQ 203 Query: 215 WLVEMLRRFNLRFALFDDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCE 271 EM +F + F D + + NPF + I S+D + + L HL Sbjct: 204 MQHEMWTKFAIPFVRLDSQGIQRIRQKLPATRNPFTYFKRAIISIDTLKSDR-YLSHLRR 262 Query: 272 AEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLL 331 +WD +V+DE+H++ + S ++ + LA++ ++L +ATP ES +RLL Sbjct: 263 HKWDAVVIDESHNVT---NTSSLNHRLADTLAKNTDALILASATPHNGKKESFAELIRLL 319 Query: 332 DPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANS 391 +P EE +++ ++ S D +G E+ A S Sbjct: 320 EPTAVKPDGNLDEE--------AVKKLIVRRHRYSEDVKKEVGADWAERKEPQARIAHAS 371 Query: 392 DSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVS 451 E+A + +EL + + H T + N FP +T Sbjct: 372 LEENAVA--EELDQIWL--HPTGHSPYSGKTN---LFPWTLAKAFLSSPEALIETIDNRL 424 Query: 452 GIMGARKSAEDRARDMLYPERI-------YQEFEGDNATWWNFDPRVEWLMGYLTS---- 500 ++ +S + AR+ Y +R+ E + A + L+ YL Sbjct: 425 RVLETHESNDAVARERSYLDRLRGYAADSLHAVERNRAENRQQTGKYGALLDYLKEIGIG 484 Query: 501 -HRSQKVLVICAKAATALQLEQVLREREGIR---AAVFHEGMSIIERDRAAAWFAEEDTG 556 + ++ + AT L+ L + ++ A+ H G+S +E+ F ++ + Sbjct: 485 PKSDTRAVIFAERVATLHALQADLTQDLKLKDDQVAILHGGLSDVEQQDVVESFKKKSSP 544 Query: 557 AQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEK 615 +VL+ ++ SEG N +V FD+P++ +EQR GR+DR GQ QI L+ Sbjct: 545 IRVLVTGDLASEGVNLHSQCHELVHFDIPWSLIRIEQRNGRIDRYGQTQRPQITTLVLQP 604 Query: 616 TAQS-----VLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG--FDDLIK 668 ++ +++ E + + + +G D ++ Sbjct: 605 DSERFSGDIRVLKKLIEKENEAHTALGDAAALMGKYTAEAEEEAIKAALAKGQDLDAVVT 664 Query: 669 NCREQHE 675 + + Sbjct: 665 DVEAATQ 671 >UniRef50_B9T918 ATP-dependent helicase, putative n=1 Tax=Ricinus communis RepID=B9T918_RICCO Length = 1167 Score = 315 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 137/596 (22%), Positives = 238/596 (39%), Gaps = 68/596 (11%) Query: 157 HQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWL 216 QL+ +L+AD+VGLGKTIEAG+++ + LL A VLI+ P +LQ +W Sbjct: 48 FQLDPLVRAIDMARVNLLIADDVGLGKTIEAGLVIQEMLLRHRARTVLIVCPASLQEKWR 107 Query: 217 VEMLRRFNLRFALFDDERYAEAQHDA---YNPFDTEQLVICSLDF--------ARRSKQR 265 VEML +F L F + D + + + NP+ + +I S+D+ A R Sbjct: 108 VEMLEKFGLEFRVVDTAYIKQLRRERGIHANPWTSHPRLIASMDWVKSGEGLRAMRDVLP 167 Query: 266 LEHLCEAEWDLLVVDEAHHLVWSEDAP----SREYQAIEQLAEHVPGVLLLTATPEQLGM 321 ++D+LVVDEAH++ + A S+ + I ++ H L LTATP Sbjct: 168 AHTSYPRKFDMLVVDEAHNIAPATGANYALESQRTRFIRSISPHFQHRLFLTATPHNGYT 227 Query: 322 ESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIG--- 378 ES + L LLD RF E+Q + + + L+ L ++ Sbjct: 228 ESFTSLLELLDDQRFARNILPDEKQLSQVMIRRLKSDLVDAEGKPLYAQRKLQALLASYS 287 Query: 379 ------EQDIEPLLQAANSDSEDAQSAR-QELVSMLM-DRHGTSRVLFRNT--------- 421 Q + + D+E +A V+ L+ R +S F +T Sbjct: 288 AQERALHQKLNDYCASREQDAEKVGNAFGTSFVNQLLKKRLFSSPAAFTSTLEKHIASLA 347 Query: 422 ----RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEF 477 R R L L + Y +V R L ++ Q+ Sbjct: 348 NVSQRKDTDAMADRILRKAILRVDEDYANDQEVENAQSEAVEEASRRAQPLTADQ--QQM 405 Query: 478 EGDNATWWNF-----DPRVEWLMGYLT-------SHRSQKVLVICAKAATALQLEQVLRE 525 + +W D + + ++ +LT ++V++ T + ++L Sbjct: 406 LNELRSWAQTAKNQADAKAKAILDWLTANLKTDGQWNDRRVILFTEYRTTHQWMHEILAS 465 Query: 526 RE--GIRAAVFHEGMSIIERDRAAAWFAE--EDTGAQVLLCSEIGSEGRNFQ-FASHMVM 580 + G R A+ H GM+ ER++ A F +D+ ++LL ++ SEG + Q + ++ Sbjct: 466 HDFGGDRLAILHGGMAQDEREKVKAAFQTSPKDSAVRILLATDAASEGIDLQNHCNCLIH 525 Query: 581 FDLPFNPDLLEQRIGRLDRIGQ-AHDIQIHVPYLEKTA--------QSVLVRWYHEGLDA 631 ++P+NP+++EQR GR+DR GQ ++ I P ++R L++ Sbjct: 526 LEIPYNPNVMEQRNGRIDRHGQRQKEVLIWHPVDGGEQGKSTIGGHGDDIIRAL-RKLES 584 Query: 632 FEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDR 687 + + + LI T + I R A + ++ R R Sbjct: 585 MRADMGSVNPVIAPQMSGLIEGSLKDLDTRFAEAKIAKARRFVRAERELKDRFRIR 640 >UniRef50_Q9NRZ9 Lymphoid-specific helicase n=68 Tax=Coelomata RepID=HELLS_HUMAN Length = 838 Score = 315 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 120/626 (19%), Positives = 225/626 (35%), Gaps = 86/626 (13%) Query: 157 HQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +Q+ + + +LADE+GLGKT++ + + G L+ P + Sbjct: 226 YQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRGVPGPFLVCGPLSTLPN 285 Query: 215 WLVEMLRRF-NLRFALFDD-----ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEH 268 W+ E R ++ L+ ++ + +VI S + A R + L+H Sbjct: 286 WMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVITSFEIAMRDRNALQH 345 Query: 269 LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAE-HVPGVLLLTATPEQLGMESHFAR 327 W L+VDE H + + + I +L + LLLT TP Q + ++ Sbjct: 346 ---CYWKYLIVDEGHRIKNMK------CRLIRELKRFNADNKLLLTGTPLQNNLSELWSL 396 Query: 328 LRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQ 387 L L P+ F D F E + +++ ++A + + L+ML +++ LL+ Sbjct: 397 LNFLLPDVFDDLKSF-ESWFDITSLSETAEDIIAKER-EQNVLHMLHQILTPF----LLR 450 Query: 388 AANSDSEDAQSARQELV-----------------------------SMLMDRHGTSRVLF 418 SD ++E+V ++ T R Sbjct: 451 RLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSPTGRP-K 509 Query: 419 RNTRNGVK-----GFPK--------------RELHTIKLPLPTQYQTAIKVSGIMGARKS 459 R TR + FP RE +++ +P + + +K+ IM + Sbjct: 510 RRTRKSINYSKIDDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMMLLRK 569 Query: 460 AEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS--HRSQKVLVICAKAATAL 517 + + YP + + + L L R KVL+ + Sbjct: 570 CCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLD 629 Query: 518 QLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH 577 L R+ + MS ER++ F + L+ + G G N A Sbjct: 630 ILMDYCHLRD-FNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTAADT 688 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYH-----EGLDAF 632 ++++D +NP Q R RIGQ + ++ T +V E L Sbjct: 689 VIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIH 748 Query: 633 EHTCPTGRTIYDSVYNDLINY-LASPDQTEGFDDLIKNCREQHEALKAQLEQGRDR---L 688 ++ G++ + N L L ++ ++ IK RE+ + K LE DR + Sbjct: 749 KNHFKGGQSGLNLSKNFLDPKELMELLKSRDYEREIKGSREKVISDKD-LELLLDRSDLI 807 Query: 689 LEIHSNGGEKAQALAESIEEQDDDTN 714 +++++G K + I E +D++ Sbjct: 808 DQMNASGPIKEKMGIFKILENSEDSS 833 >UniRef50_UPI0001795D73 PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 9 (ATP-dependent helicase CHD9) (CHD-9) (Chromatin-related mesenchymal modulator) (CReMM) (Chromatin-remodeling factor CHROM1) (Peroxisomal proliferator-activated receptor A-interacting complex 3 n=1 Tax=Equus caballus RepID=UPI0001795D73 Length = 2818 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 104/565 (18%), Positives = 201/565 (35%), Gaps = 60/565 (10%) Query: 93 SGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRT 152 V L ++ +L S+P R +DR + + + Sbjct: 816 EDVDLAKIEEFEQLQASRPDTR----HLDRPPSNIWKKIDQSRDYKNGN----------- 860 Query: 153 SLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPET 210 L +QL + + R +LADE+GLGKTI++ L++ LL+G LII P + Sbjct: 861 QLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLS 920 Query: 211 LQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF------------DTEQLVICSLDF 258 W E ++ ++ + Y + Q +I + + Sbjct: 921 TIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEM 980 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 L + EW +++DEAH L ++ + + ++ + ++ +LLT TP Q Sbjct: 981 ILGGCGELNAI---EWRCVIIDEAHRL---KNKNCKLLEGLKLM--NLEHKVLLTGTPLQ 1032 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYR--PVADAVAMLLAGNKLSNDELNMLGEM 376 +E F+ L L+P RF + F++E + + + +L L + ++ ++ Sbjct: 1033 NTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKL 1092 Query: 377 IGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTI 436 +++ ++ N + ++ ++ S L G + V N N + K H Sbjct: 1093 APKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNV--PNLVNTMMELRKCCNHPY 1150 Query: 437 KLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMG 496 + GA + RD P + + ++ L+ Sbjct: 1151 LIK---------------GAEEKILGEFRDTYNPAASDFHLQAMIQSAGKL-VLIDKLLP 1194 Query: 497 YLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTG 556 + + KVL+ LE L + + R A F++ D+ Sbjct: 1195 KMKAG-GHKVLIFSQMVRCLDILEDYLI-HKRYLYERIDGRVRGNLRQAAIDRFSKPDSD 1252 Query: 557 AQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEK 615 V LLC+ G G N A ++FD +NP Q R RIGQ ++++ Sbjct: 1253 RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRN 1312 Query: 616 TAQSVLVRWYHEGLDAFEHTCPTGR 640 + + + L + + Sbjct: 1313 SYEREMFDRASLKLGLDKAVLQSMS 1337 >UniRef50_D0NVP0 Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NVP0_PHYIN Length = 1092 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 120/587 (20%), Positives = 214/587 (36%), Gaps = 73/587 (12%) Query: 154 LIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPET 210 + P+QL + + R H V +LADE+GLGKT+++ +L G +IIVP++ Sbjct: 153 MKPYQLEGLNWMIRLHDSGVNGILADEMGLGKTLQSISLLAYLREARGIEGPHIIIVPKS 212 Query: 211 LQHQWLVEMLRRF-NLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHL 269 W+ E+ R +++ F + A ++ S + A K L+ + Sbjct: 213 TVGNWMRELKRWCPSIKAFKFMGSKDERAVQRETVVRQDFDALVLSYEVAIIEKSILQKI 272 Query: 270 CEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLR 329 +W L++DEAH + ++ S+ + + + V LL+T TP Q + +A L Sbjct: 273 ---KWKYLLIDEAHRV---KNENSKLSKVVREF--KVEHRLLITGTPLQNNLHELWALLN 324 Query: 330 LLDPNRFHDFAQF-----VEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEP 384 L P+ F D F V+EQ+ V + +L L + ++ + + + + Sbjct: 325 FLLPDVFSDSEDFDAWFNVDEQEGQENVIKKLHTILRPFLLRRLKADVEHSLPPKIETKL 384 Query: 385 LLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT--RNGVKGFPKRELHTIKLPLPT 442 + + M R RVL R+ N + G + L I + L Sbjct: 385 YVGLSE-----------------MQREWYMRVLHRDATHLNAIGGSDRVRLLNILMQLRK 427 Query: 443 QYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR 502 G P YQE W ++ L L + Sbjct: 428 VCNHPYLFEGA---------------EPGPPYQE----GPHLWENCGKMTLLHKLLPKLQ 468 Query: 503 SQ--KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-V 559 +Q +VL+ C + LE +R +RD F E + Sbjct: 469 AQGSRVLIFCQMTSMMDILEDYMRYFS-HDYCRLDGSTKGEDRDNMMEEFNEPGSSKFCF 527 Query: 560 LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS 619 LL + G G N A +++FD +NP + Q + R RIGQ +++ + T + Sbjct: 528 LLSTRAGGLGINLATADIVILFDSDWNPQVDLQAMDRAHRIGQTKIVRVFRFITDGTVEE 587 Query: 620 VLVRWYHEGLDAFEHTCPTGRTIYDSV--------------YNDLINYLASPDQTEGFDD 665 +V L GR + +++ N S + D Sbjct: 588 KIVERAERKLYLDAAIIQQGRLAQQNRKLSKDELMTMVRFGADEIFNARGSMITDDDIDA 647 Query: 666 LIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDD 712 ++ E+ E++K ++ L S G+ A S+ E + + Sbjct: 648 ILARGEERTESMKGKIAADMQHNLANFSLSGDNGNANVSSLYEFEGE 694 >UniRef50_A7RMN4 Predicted protein (Fragment) n=14 Tax=Eumetazoa RepID=A7RMN4_NEMVE Length = 1360 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 103/590 (17%), Positives = 208/590 (35%), Gaps = 54/590 (9%) Query: 130 YRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEA 187 +R R Y E ++ S + +L +QL + + R +LADE+GLGKTI++ Sbjct: 205 FRPRPYPHEWHKLETSPVYKDENTLREYQLEGVNWLMFCWCNRQNSILADEMGLGKTIQS 264 Query: 188 GMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD 247 L + G L+I P + W E ++ ++ + Y + Sbjct: 265 IAFLFEMQRYGIRGPNLVIAPLSTISNWQREFESWNDINAVVYHGSASSRHLIQEYEFYY 324 Query: 248 ------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 Q++I + + L W +++DEAH L ++ + Sbjct: 325 RDEHGQPIPNIFKFQVLITTYEIIIADN---MQLSTVPWRAVIIDEAHRL---KNRNCKL 378 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 + + L + +LLT TP Q +E F+ L L+P++F F+ E + + + Sbjct: 379 LEGLNNL--QMEHRILLTGTPLQNNVEELFSLLNFLEPSQFPSQGAFLMEFGDLKTESQV 436 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR 415 D+L L + + +L+ D E + ++E + ++ + Sbjct: 437 ------------DKLKQLLKPM-------MLRRLKEDVEKNIAPKEETIIE-VELTTVQK 476 Query: 416 VLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ 475 +R F + + +P T +++ +L E + Sbjct: 477 KFYRAILERNFAFLAKGTSST-ANVPNLMNTMMELRKCCNHPFLITGAEEKIL-QEYGRE 534 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAV 533 + ++ + L + KVLV LE L Sbjct: 535 HVDRHTHAMIEASGKLVLIHKLLPKLKLGGHKVLVFSQMVRCLDILEDYLV-HMKYPYER 593 Query: 534 FHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQ 592 + R A F++ D+ V LLC+ G G N A +++FD +NP Q Sbjct: 594 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQ 653 Query: 593 RIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYN---- 648 R RIGQ+ ++++ + + + L + + T ++ N Sbjct: 654 AQARCHRIGQSRSVKVYRLITRNSYEREMFDRASMKLGLDKAVLQSMNTKENAGNNGQMS 713 Query: 649 --DLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGG 696 ++ + L ++ + + E Q+ + R +++++ S G Sbjct: 714 KREIEDLLKRGAYGAIMEEDNDDASKFCEEDIDQILERRTQVIQVESEGK 763 >UniRef50_Q5TQJ2 AGAP008482-PA (Fragment) n=94 Tax=cellular organisms RepID=Q5TQJ2_ANOGA Length = 4793 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 89/526 (16%), Positives = 185/526 (35%), Gaps = 46/526 (8%) Query: 133 RKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMI 190 R + + +P S L P+QL + + +LADE+GLGKTI++ Sbjct: 1833 RPHPDQWKALPESPTFKGGNKLRPYQLEGLNWLRYSWYKGNNCILADEMGLGKTIQSLTF 1892 Query: 191 LHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNP----- 245 ++ G L+I P + W E + ++ + Y Sbjct: 1893 VNSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTEMNVIVYHGSATSRQMIQDYEVHYRTE 1952 Query: 246 -------FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA 298 ++I + + Q L++ W V+DEAH L ++ + + Sbjct: 1953 TGKLIRDITKFNVLITTFEMIVTDYQDLKNFT---WRACVIDEAHRL---KNRNCKLLEG 2006 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAM 358 + QL ++ +LL+ TP Q + F+ L L+P++F +F+ E + + ++ + + Sbjct: 2007 LRQL--NLEHRVLLSGTPLQNNVNELFSLLNFLEPSQFACSEEFLREFGSLKTESEVLKL 2064 Query: 359 LLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLF 418 + +L+ D E + + ++E + ++ + + Sbjct: 2065 QALLKPM-------------------MLRRLKDDVEKSLAPKEETIVE-VELTNIQKKYY 2104 Query: 419 RNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 R F + + +P ++ I + + Y ++ ++ E Sbjct: 2105 RGILEQNFSFLMKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEDQIQYDYRQQHGEDAE 2164 Query: 479 GDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 ++ + L R +VL+ LE L ++ Sbjct: 2165 SYYKNLIVSSGKMVLIDKLLPKLRANGHRVLIFSQMVRCLDILEDYLMYKK-YPFERIDG 2223 Query: 537 GMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIG 595 + R A +++ D+ V LLC++ G G N A ++++D +NP Q Sbjct: 2224 RIRGNLRQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQA 2283 Query: 596 RLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT 641 R RIGQ ++I+ T + + L + + T Sbjct: 2284 RCHRIGQQKMVKIYRLLCRNTYEREMFDKASLKLGLDKAVLQSMNT 2329 >UniRef50_A2DTG9 F/Y-rich N-terminus family protein n=1 Tax=Trichomonas vaginalis RepID=A2DTG9_TRIVA Length = 1247 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 106/603 (17%), Positives = 214/603 (35%), Gaps = 60/603 (9%) Query: 157 HQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQ-LLSGAAERVLIIVPETLQH 213 +QL+ + + +LADE+GLGKT++ + L+ L LIIVP + Sbjct: 171 YQLDGLNFLMNCWCNHRNAILADEMGLGKTLQVSVFLNTLNKLKKIRGPFLIIVPLSTIG 230 Query: 214 QWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDT------EQLVICSLDFARRSKQRLE 267 W E+ +L LF +Y Y + Q+++ + D+ R E Sbjct: 231 HWEQELEEWTDLHCTLFCFNKYRREICKTYEFYFENTRIPIFQVLLTTYDYITREN---E 287 Query: 268 HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 W+++V DEAH + +++ S+ Q ++ L LLLT TP Q ++ Sbjct: 288 LFSGVNWEVIVCDEAHKM---KNSNSKLMQNMKNL--KSKFKLLLTGTPIQNSTPELWSL 342 Query: 328 LRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQ 387 L ++P +F +F E+ G + +++ L ++ +L+ Sbjct: 343 LNYINPEKFESLEEFQEKF---------------GTVNESSQISQLNSILK----PIMLR 383 Query: 388 AANSDSEDAQSARQELVSML----MDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQ 443 SD E + + +E++ + ++ V RNT ++G K+ + + Sbjct: 384 RVKSDVEKSLTPIEEIIIECKMTDVQKYYYRSVFTRNTVFLLRGTEKKTPNFLM------ 437 Query: 444 YQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRS 503 +++ + + +++ E + ++ L L Sbjct: 438 -NITMELRKVCNHPYLIQGAEENIMRDLNKTGEIKTIQDGLIRSCGKMILLDKLLDRLLP 496 Query: 504 Q--KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-L 560 + +VL+ ++ L + GI+ + ER A F+ + + + L Sbjct: 497 EGHRVLIFSQFTLILDIIQDYLNLK-GIKYVRLDGNVRGPERQAAIDNFSRDGSDIPIFL 555 Query: 561 LCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSV 620 L + G +G N A ++++D +NP Q R RIGQ ++++ + + Sbjct: 556 LTTRAGGQGINLTAADTVIIYDSDWNPQNDIQATARCHRIGQTKSVKVYRFLTSNSYERS 615 Query: 621 LVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQ 680 + L + L+ A D K E + + A Sbjct: 616 MFDIASRKLGLDHAVLEGSSKERSENLDKLLRLGAYYQFYSNDSDDNKFASEDIDDIIAH 675 Query: 681 LEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLF-----DIIGINQDDRGD 735 ++ R GGE + E + + +F L D G + + Sbjct: 676 SQRIR----HESVFGGEGSTFSNAQFEVNEAELEAPSFWKKLLVDIGDDDAGESIEQAIA 731 Query: 736 NMI 738 + Sbjct: 732 DSW 734 >UniRef50_A8Q392 Associated with TFs and helicases family protein n=1 Tax=Brugia malayi RepID=A8Q392_BRUMA Length = 2707 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 112/622 (18%), Positives = 213/622 (34%), Gaps = 63/622 (10%) Query: 151 RTSLIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVP 208 L +Q + + + +LADE+GLGKT++ L + G LI+VP Sbjct: 1051 NNRLREYQFEGVNWLLYCYYNKQNCILADEMGLGKTVQTICFLQRVYDYGIHGPFLIVVP 1110 Query: 209 ETLQHQWLVEMLRRFNLRFALFDDE----RYAEAQHDAYNPFD---------TEQLVICS 255 + H W E ++ ++ + + Y P + +I + Sbjct: 1111 LSTIHNWQREFETWTDMNTIVYHGSAASRQIIQQTEFYYRPEELKGGKRNVVKFDALITT 1170 Query: 256 LDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTAT 315 + + L + + + ++DEAH L ++ + + + +LLT T Sbjct: 1171 FEMVVSD---CDVLKQINYQVCIIDEAHRL---KNRNCKLLTSGLL-SLTAEHRVLLTGT 1223 Query: 316 PEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGE 375 P Q +E ++ L L+P +FH + F+E+ G + D++ L + Sbjct: 1224 PLQNNIEELYSLLNFLEPEQFHSSSAFLEQF---------------GQCQTEDQVQRLQD 1268 Query: 376 MIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR----VLFRNTRNGVKGFPKR 431 ++ +L+ D E ++E + + + + +L RN + KG Sbjct: 1269 ILK----PMMLRRLKEDVEKTLQPKEETIIEIQLSNTQKKYYRAILERNFSHLCKGTSVP 1324 Query: 432 ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRV 491 L + L +SG + + IYQ ++ Sbjct: 1325 SLMNAMMELRKCCNHPFLISGAEEQILAEVKAGHPDWSEDDIYQHA------LVQSSGKL 1378 Query: 492 EWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAW 549 + L R KVL+ +E+ L + + R A Sbjct: 1379 VLIAKLLPKLRTDGHKVLIFSQMVRVLDIIEEFLVAQ-NYTFERIDGNVRGDLRQSAIDR 1437 Query: 550 FAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 F+++D+ + LLC+ G G N A +++FD +NP Q R RIGQ +++ Sbjct: 1438 FSKKDSDRFIFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQTKMVKV 1497 Query: 609 HVPYLEKTAQSVLVRWYHEGLD----AFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFD 664 + T + + L + T T ++ L + Sbjct: 1498 YRLITCNTYEREMFDKASLKLGLDRAVLQSTTALKDTSQQLSRKEIEELLKKGAYGAIME 1557 Query: 665 DLIKNCREQHEALKA-QLEQGRDRLLEIHSNGGEKAQALAE-SIEEQDDDTNLIAFAMNL 722 + + + E ++ L + LE G A+A S +D D + F Sbjct: 1558 ENAEESKFNEEDIETILLRRTTTITLEAGVKGSTFAKASFNSSTNREDIDIDDPNFWSKW 1617 Query: 723 FDIIGINQDDRGDN--MIVLTP 742 I+ D + +IVL P Sbjct: 1618 AKKANIDTDMSQADKQLIVLEP 1639 >UniRef50_D2UX51 Chromodomain helicase DNA binding protein n=1 Tax=Naegleria gruberi RepID=D2UX51_NAEGR Length = 1800 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 100/536 (18%), Positives = 178/536 (33%), Gaps = 49/536 (9%) Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIE 186 R AR + ++ S L +QL + + R +LADE+GLGKT++ Sbjct: 330 RIPARPAPHKFKKLEESPSFRDGNQLREYQLEGLNWLVFCWYQRRNSILADEMGLGKTVQ 389 Query: 187 AGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNP 245 L ++I P + W E ++ +F + + Sbjct: 390 TVATLEYLRAFEHIRGPFIVIAPLSTVEHWKREFENWTDMNVLVFHGNTQSREVMKNHEF 449 Query: 246 FDTEQ---------------LVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 F ++I + + L + W LVVDE H L ++ Sbjct: 450 FFKHPKTGNLIYHQKTYKFNVLITTYEIVMAESSY---LSKIPWQYLVVDEGHRL---KN 503 Query: 291 APSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR 350 S+ Q ++ + LLLT TP Q + F+ L+ LDP F+D F EE N Sbjct: 504 HNSKLAQILKNF--NAVHKLLLTGTPIQNNLTELFSLLQFLDPETFYDLDVFSEEYGNLG 561 Query: 351 PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDR 410 +++L L ++I + L + + E+V + + Sbjct: 562 ESG-------------SEKLEGLHKLISPYILRRLKEDVEKSIPPKEEIVVEVVPTSIQK 608 Query: 411 HGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP 470 + RN +KG K +P +++ + A + + Sbjct: 609 AYEQAIFKRNREFLMKGVSK------SQNVPKLNNVLMELRKVCNHPFLI-SGAEENITR 661 Query: 471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIR 530 E + V+ L+ L KVL+ LE +R R Sbjct: 662 GMSDVEVNEALIKSSSKMILVDKLLRKLREG-GHKVLIFSQMVLVLNILEDYMRYR-NFT 719 Query: 531 AAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDL 589 + R +A F + + V L+ ++ G G N A ++++D +NP Sbjct: 720 YVRLDGTIKGSIRQQAIDRFNDPNIDTFVFLVSTKAGGVGINLTSADTVIIYDSDWNPQN 779 Query: 590 LEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDS 645 Q R RIGQ +++I+ + T + + L + S Sbjct: 780 DLQAQARCHRIGQTKEVKIYRLLTKNTKEKEIFERASMKLGLDRAVLSSNNEFVQS 835 >UniRef50_B2JBC5 Helicase domain protein n=4 Tax=Cyanobacteria RepID=B2JBC5_NOSP7 Length = 946 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 143/712 (20%), Positives = 272/712 (38%), Gaps = 68/712 (9%) Query: 138 EQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLS 197 P+ L P+QL + ++L+AD+VG+GKTIEAG+I + L Sbjct: 89 RSGAGPFRCLGRLSLRPRPYQLVPLLMALKLETVKLLVADDVGIGKTIEAGLIARELLDR 148 Query: 198 GAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYN---PFDTEQLVIC 254 G +R+ ++ P L QW E+ +F++ + ++ + + N F + +I Sbjct: 149 GEVKRIAVLCPPHLCDQWQQELREKFHIDAVVVRSGTASKLERNIPNNDSVFSYYRHLIV 208 Query: 255 SLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPS---REYQAIEQLAEHVP-GVL 310 SLD+A+ ++R + DL++VDEAH + + +Q I ++A+ +L Sbjct: 209 SLDYAKAERRRASFITHCP-DLVIVDEAHTCARPNKTTTSQQQRHQLITEIAQKQEQHLL 267 Query: 311 LLTATPEQLGMESHFARLRLLDPNRFH-DFAQFVEEQKNY-------RPVADAVAMLLAG 362 LLTATP ES + L LL P H + ++Q+++ R AD L Sbjct: 268 LLTATPHSGIEESFLSLLGLLKPEFEHFNLNSLTDKQRDHLANHFVQRRRADVKLWLGNE 327 Query: 363 NKLSNDELNMLGEMIGEQDIE----------PLLQAANSDSEDAQSARQELVSMLMDRHG 412 E + + ++ E L++ +D AQ + ++ + R Sbjct: 328 TPFPERESSEESYKLSKEYKELFDEVYDFARGLVKTTTADMSHAQRRGRYWSALALIRCV 387 Query: 413 TSR------VLFR---NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDR 463 S L R + + + + + Q Q ++ + + Sbjct: 388 MSSPAAAIATLNRQVSKSGGSLTDLDEDLMSSYVHDPTEQEQAVDASPTVVIEQGQQSYK 447 Query: 464 ARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKV--LVICAKAATALQLEQ 521 D + Q E D +++ + + S ++ +V C ATA + Sbjct: 448 DADKRKLKAFVQSAEKLQG---GKDQKLQSCIATVESLLKDEMNPIVWCRYIATANYVAD 504 Query: 522 VLRERE-----GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ-FA 575 LR++ IR +S ER+ +VL+ ++ SEG N Q Sbjct: 505 ALRQKLQKKGSQIRVIAITGELSEDEREIRLEELKSYPQ--RVLVATDCLSEGVNLQTHF 562 Query: 576 SHMVMFDLPFNPDLLEQRIGRLDRIGQAHD-IQIHVPY-----LEKTAQSVLVRWYHEGL 629 S ++ +DLP+NP+ LEQR GR+DR GQ ++ + Y ++ VL+R + Sbjct: 563 SAVIHYDLPWNPNRLEQREGRIDRYGQTATKVKACLLYGRDNPVDGAVLDVLIRKAVQIH 622 Query: 630 DAFEHTCPTG-------RTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE 682 + T P ++ S++ + + + + + + + Sbjct: 623 KSLGITVPVPMESTTVAEAVFKSLFERTTEVIQLSLFDFQEESAVDKVHKNWDNAVEREK 682 Query: 683 QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTP 742 R R + + Q L +S + ++ ++ F ++ D I + ++ P Sbjct: 683 TNRTRFAQRAIKPEQVEQELIDSDQILGNEQDVERFVISACDRISCYLIKKKQGWLLPQP 742 Query: 743 SDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSG 794 D + L + +TF A E +++ HPL+ IL Sbjct: 743 PDFLK----STLGDKSRLLTF---TTPAPEGVEYVGRNHPLVEGLAQYILED 787 >UniRef50_A4J1V5 Helicase domain protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1V5_DESRM Length = 942 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 156/717 (21%), Positives = 261/717 (36%), Gaps = 96/717 (13%) Query: 146 GLRGQRTSLIPHQLNIAHDVGRRH-APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVL 204 + R L PHQ++ A R + V++ADEVGLGKTIEAG++L Q+ ++L Sbjct: 29 SMANARVDLNPHQVDAALFALRSPLSKGVIMADEVGLGKTIEAGLVLSQRWAE-RKRKIL 87 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA-YNPFDTEQ-LVICSLDFARRS 262 +I+P TL+ QW +E+ +F L + + Y + + PF+ + ++ICS FA Sbjct: 88 LILPATLRKQWQMELEEKFFLPTLILESASYNCLRKEGITKPFERQDAIIICSFHFA--- 144 Query: 263 KQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGME 322 R E L + WDL+++DEAH L ++ Q+I+ H P LLLTATP Q + Sbjct: 145 AARAEELRQVSWDLVIIDEAHRLRNVYKTSNKMAQSIKTAVSHAP-KLLLTATPLQNSLL 203 Query: 323 SHFARLRLLDPNRFHDFAQFV--------EEQKNY-----------RPVADAVAMLLAGN 363 + + ++D + F D + EEQ+N+ R + V + Sbjct: 204 ELYGLVSVIDDHVFGDVKTYRDQFIHESDEEQRNHKLRERLKALCTRTLRKQVLEYVRYT 263 Query: 364 KLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRN 423 K L ++ E + A A Q + L+ R + F Sbjct: 264 KRIPITQEFLPSDAEQRLYEEVSDYLQRQILLALPAGQRSLMTLVLRKLLASSTFAIAGA 323 Query: 424 GVKGFPKRELHTIKLPLPTQYQTAIKVSGIM--------GARKSAEDRARDMLYPERIYQ 475 K + E +P + + + + + R L R Y Sbjct: 324 LRKLINRLEDMEADAVMPDMSEDFEGLDELADEWNGDAEPQERMDPSQIRQELAILRSYA 383 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTS----HRSQKVLVICAKAATALQLEQVLREREGIRA 531 + + + L L + K ++ T L ++L Sbjct: 384 KLAESIQHNAKGEALLVALEQALDQATTLGAANKAVIFTESRRTQQYLLEILSANGYDGQ 443 Query: 532 AV---------------------------FHEGMSIIERDRAAAWFAEEDTGAQVLLCSE 564 V + R F E T +L+ +E Sbjct: 444 IVLFNGSNSDPHSKRIFKEWLQRHQGQDIITGSPTADMRAALIEEFRERGT---ILIATE 500 Query: 565 IGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLE-KTAQSVLVR 623 +EG N QF S +V +DLP+NP +EQRIGR R GQ +D+ + + A + + Sbjct: 501 SAAEGVNLQFCSLVVNYDLPWNPQRIEQRIGRCHRYGQKYDVVVVNFLNKRNAADQRVYQ 560 Query: 624 WYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHE------AL 677 E F+ + ++ + D + + + CR Q E AL Sbjct: 561 LLAEKFRLFDGVFGASDEVLGALE-------SGVDLEKRIAQVYQECRTQEEITLAFDAL 613 Query: 678 KAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNM 737 +A+LE L E QAL ++ ++D L N + +++ Sbjct: 614 QAELEGNISHRL------VETRQALLDNF-DEDVHMRLKMHQDNTTLKLSEHEEKLLALA 666 Query: 738 IVLTPSDHMLVPDFPGLSEDGI-----TITFDREVALAREDAQFITWEHPLIRNGLD 789 + +P+ P G + + A D F EHPL R ++ Sbjct: 667 RLELVGQADFLPEAPRFYYYGPDAPKGLYHLNWKEAEKYGDT-FFRPEHPLARKIIE 722 >UniRef50_D1HST8 Whole genome shotgun sequence of line PN40024, scaffold_9.assembly12x (Fragment) n=3 Tax=Magnoliophyta RepID=D1HST8_VITVI Length = 1539 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 120/660 (18%), Positives = 230/660 (34%), Gaps = 61/660 (9%) Query: 117 AGQIDRMDRFALRYRARKYSSE----QFRMPYSGLRGQRTS--------LIPHQLNIAHD 164 A D +D + R A + Q + + LR L +QL + Sbjct: 372 AFAQDAIDEYKAREAAAAIQGKMVDMQRKKSKASLRKLDEQPGWLKGGQLRDYQLEGLNF 431 Query: 165 VGR--RHAPRVLLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPETLQHQWLVEMLR 221 + R+ V+LADE+GLGKT+++ +L L++VP + W E + Sbjct: 432 LVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIYGPFLVVVPLSTLSNWAKEFKK 491 Query: 222 RF-NLRFALFDDERYAEAQHDAYNPFDT--------EQLVICSLDFARRSKQRLEHLCEA 272 +L ++ R + Y + ++ + + + K L + Sbjct: 492 WLPDLNVIVYVGTRASREVCQQYEFYTNKKTGRTILFNALLTTYEVVLKDKAV---LSKI 548 Query: 273 EWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLD 332 +W+ L+VDEAH L +++ ++ Y + + + LL+T TP Q +E +A L LD Sbjct: 549 KWNYLMVDEAHRL---KNSEAQLYTTLSEFS--AKNKLLITGTPLQNSVEELWALLHFLD 603 Query: 333 PNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD 392 P++F + FV+ KN + L + ++ ++ E+ + P ++ Sbjct: 604 PDKFKNKDDFVQNYKNLSSFNEMELANLHMELRPHILRRVIKDV--EKSLPPKIERILRV 661 Query: 393 SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSG 452 + +++ +++R+ F + GV+G + L I + L Sbjct: 662 --EMSPLQKQYYKWILERN------FHDLNKGVRG-NQVSLLNIVVELKKCCNHPFLFES 712 Query: 453 IMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAK 512 I + D +E L + +VL+ Sbjct: 713 ADHGYGGNRSTNDCGKLERLILS-----SGKLVLLDKLLEKLHET-----NHRVLIFSQM 762 Query: 513 AATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRN 571 L + + R G + R +A F + LL + G G N Sbjct: 763 VRMLDILAEYMSLR-GFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGIN 821 Query: 572 FQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDA 631 A +++FD +NP Q + R RIGQ + I+ K+ + +++ + + Sbjct: 822 LATADTVIIFDSDWNPQNDLQAMSRAHRIGQREVVNIYRFVTSKSVEENILKRAKQKM-V 880 Query: 632 FEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEI 691 +H + + D+ E L E + K + E+ + RLL Sbjct: 881 LDHLVIQKLNAEGRLEKKESKKGSYFDKNELSAILRFGAEELFKEDKNE-EESKKRLL-- 937 Query: 692 HSNGGEKAQALAESIEEQDDDTNLIAFAMNL-FDIIGINQDDRGDNMIVLTPSDHMLVPD 750 S ++ AE +EE++ G +DD + P D Sbjct: 938 -SMDIDEILERAEKVEEKETGEEGNELLSAFKVANFGSAEDDGSFWSRWIKPEAVAEAED 996 >UniRef50_B6AJZ0 SNF2 family helicase, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AJZ0_9CRYT Length = 1313 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 114/549 (20%), Positives = 208/549 (37%), Gaps = 37/549 (6%) Query: 153 SLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPE 209 L+P+Q+ + + + +LADE+GLGKTI+ +L LI+VP Sbjct: 493 ELLPYQIVGVEWMLSLYNNNLHGILADEMGLGKTIQTIALLTYLYEHKNNYGPHLIVVPL 552 Query: 210 TLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEH 268 + WL E +L+ F RY + + + DF R K L+ Sbjct: 553 STLPNWLKEFNIWSPSLKLLCFKGNRYERKNLIRELRLMKFNICLTTFDFVIREKNILQT 612 Query: 269 LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 + W ++VDE H L +++ S+ + + +LLT TP Q + ++ L Sbjct: 613 IS---WKHVIVDEGHRL---KNSKSKFHIVLHDF--QSKNRILLTGTPLQNNINELWSLL 664 Query: 329 RLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQA 388 L P FH F E RP ++ + ++L ++ + L + Sbjct: 665 NFLLPKVFHSVEDF--ENWFNRPFSELSSSENQIELTEEEKLFIINRLHSILRPFLLRRV 722 Query: 389 ANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAI 448 + +D R+ ++ M + RV++ ++ +H++ + Q Sbjct: 723 KSDVLQDLPEKREYIIRMELTPW--QRVVY-------GQIKQKAVHSMDISSGK-IQYRS 772 Query: 449 KVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKV 506 + IM RK + +P E+ N + + E L + KV Sbjct: 773 VSNTIMQLRKI-------VNHPYLFVDEYFARNDDIFKVSCKFEILDRMIPKLVYFKHKV 825 Query: 507 LVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEI 565 L+ C L L R+ I M+I ER F + D+ V +L + Sbjct: 826 LIFCQMTQLMDILGDFLDYRD-ISYYRLDGTMNIQERKEKMDIFNDPDSNTFVFMLSTRA 884 Query: 566 GSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWY 625 G G N Q A +++FD +NP Q R R+GQ +++++ + ++++ Sbjct: 885 GGLGLNLQAADTVIIFDSDWNPHQDLQAQSRAHRMGQKNEVRVFRLVSISGVEELVLKRA 944 Query: 626 HEGLDAFEHTCPTGRTIYDSVYNDL-INYLASPDQTEGFDDLIK-NCREQHEALKAQLEQ 683 + LD + G+ + +D + L E FD IK + L A+ E+ Sbjct: 945 QKKLDIDQKIIQAGKFNSTEIPDDSHEDSLRELFGKEEFDSNIKITTPSELNRLLARNEK 1004 Query: 684 GRDRLLEIH 692 + E+ Sbjct: 1005 ELQKYEEMD 1013 >UniRef50_B0ETQ4 Chromodomain helicase hrp1, putative n=2 Tax=Entamoeba RepID=B0ETQ4_ENTDI Length = 1249 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 105/638 (16%), Positives = 202/638 (31%), Gaps = 76/638 (11%) Query: 154 LIPHQLNIAHDVGRR--HAPRVLLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPET 210 L +QL + + +LADE+GLGKT++ L LI+VP + Sbjct: 302 LRSYQLEGHNWLVFNWCRGKGCILADEMGLGKTVQVVSFLEHLYSFQKLQGPFLIVVPLS 361 Query: 211 LQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDT------------EQLVICSLDF 258 + W E+L ++ ++ + Y + +++ + + Sbjct: 362 MIEHWHREILEWTDMNVVIYHGSKGNRQLVKHYEWYYKDFQGKLIPGHLKFHVLLTTYEI 421 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 E L + W + VVDEAH L ++ S+ +A+ + +LLT TP Q Sbjct: 422 VISDW---EDLSKISWLVTVVDEAHRL---KNKDSKLLKALCNI--QTNHKVLLTGTPIQ 473 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIG 378 + + L ++P F +F E + A+ V L Sbjct: 474 NNLGELWTLLNYIEPKTFSSLEEFDHEFNSLDKSAEQVNKL------------------Q 515 Query: 379 EQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKL 438 E L+ ++ E + ++E + ++ + +R + F + + Sbjct: 516 ESIKPFFLRRMKNEVEKSIPPKEETIIE-VELTMVQKQYYRALYEKNREFLNKGCVGSNV 574 Query: 439 PLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYL 498 P ++ + +PE F ++ L L Sbjct: 575 PNLQNLMMQLRKVCNHPYLIPGVEEKDTAQFPEGSPDYFN----QLIRSSGKLVLLDKLL 630 Query: 499 TSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEED-T 555 KVL+ +E+ L+ + G + +R A F + Sbjct: 631 PKLYADHHKVLIFSQLKKVLNIIEKYLKYK-GYFYERLDGSIKSEDRQNAIDRFMNPEMN 689 Query: 556 GAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEK 615 LLC+ G G N A ++++D +NP Q R RIGQ +++++ + Sbjct: 690 RFIFLLCTRAGGFGINLSEADTVIIYDSDWNPQNDLQAQARCHRIGQKKEVKVYRLVSKN 749 Query: 616 TAQSVLVRWYHEGLDAFEHTCPTGRTIYD-----SVYNDLINYLASPDQTEGFDDLIKNC 670 T + + L + T D +LI L F D ++ Sbjct: 750 TYERYMFERASMKLGLDQAVLANITTSSDPKDKQQPSKELIESLLRNGAYGAFKDDEESS 809 Query: 671 REQHEALKAQLEQGR---------DRLLEIHSNGGEKAQALAESIEEQDDD--------- 712 + E Q+ + R + L + E+I+ D+ Sbjct: 810 SKFCEEDIEQILEKRSSKVVWKGGENSLSGSFSTATFQSETGETIDVNDEHFWEKVLPKD 869 Query: 713 ---TNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHML 747 + L ++F N +L + L Sbjct: 870 RNVSQLTKIFNDVFGGRAGRTSQARRNSWILNEKEQYL 907 >UniRef50_Q23KF5 Type III restriction enzyme, res subunit family protein n=2 Tax=Tetrahymena thermophila RepID=Q23KF5_TETTH Length = 2184 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 112/611 (18%), Positives = 214/611 (35%), Gaps = 62/611 (10%) Query: 87 RLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSG 146 R +ES L + K + Q+ +I L+ + Y ++ P+ Sbjct: 743 RALDKESRQVLSQQLERHKTLLDLEQNPKKKQKIGPQGLIELKNKLFFYDVANYKQPFQY 802 Query: 147 ------LRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQL-LS 197 + QR L +QL + + V+LADE+GLGKTI++ ++ Sbjct: 803 TQKTQPIYKQRKLLRYYQLESLNWMIEAWYSKRNVILADEMGLGKTIQSTAFINHLYTFE 862 Query: 198 GAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAY-------------- 243 LII P + W + NL L+ D E ++ Sbjct: 863 NVRGPFLIIAPLSTLEHWKRSVEDWTNLNAVLYYDHSGQEGRNCCRFYEWLYTDISTKGT 922 Query: 244 ----NPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAI 299 N Q++I S + L + +VVDEAH L ++ ++ + Sbjct: 923 VLQSNEIYKFQVLITSNEVFLSDTN--NFLINIPFQFIVVDEAHRL---KNQNAKILATL 977 Query: 300 EQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML 359 ++L LLLT TP Q E + L ++PN+F +F E+ + Sbjct: 978 KRLP--CKRTLLLTGTPIQNNTEELWTLLNYIEPNKFASLQEFKEQFGELQNKEQV---- 1031 Query: 360 LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 + + + LL+ D ED+ QE + + + + L+R Sbjct: 1032 ---------------DNLQVKIKPFLLRRMKEDVEDSIPPLQETIIDI-EMTTLQKTLYR 1075 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 K ++ ++ + + +++ ++ ++ + ++ E Sbjct: 1076 AIYERNKSMLQKNFSSMAMNT-SLNNLEMQLRKCCNHPFLIKEMEIELT---QNFKTSEE 1131 Query: 480 DNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEG 537 + ++ L + ++ +K+L+ LE+ LR R+ ++ Sbjct: 1132 RYKCLVDTSGKMILLDKLVQKYKIEGKKILIFSQFVYMLNLLEEYLRYRQ-LKYEKIDGS 1190 Query: 538 MSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 + ER A F + D V LL ++ G G N A+ +++FD +NP Q R Sbjct: 1191 VKSKERQNAIDRFNDPDKKRDVFLLSTKAGGLGINLTSANIVIIFDSDWNPQNDVQATAR 1250 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS 656 RIGQ ++ ++ +KT ++ + + L + G D L Sbjct: 1251 AHRIGQKQEVMVYRFITKKTYEAEMFERATKKLGLDQAIFMGGEFKSVQGNKDESKKLGK 1310 Query: 657 PDQTEGFDDLI 667 D I Sbjct: 1311 NDVESLLKKGI 1321 >UniRef50_C6WH64 Helicase domain protein n=3 Tax=Actinomycetales RepID=C6WH64_ACTMD Length = 1131 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 147/713 (20%), Positives = 245/713 (34%), Gaps = 74/713 (10%) Query: 90 TEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRG 149 + E L +P D F L A++ S P + Sbjct: 46 DQRMLFREDEANLARAESGGRPLDA-------DPLEFRLVAEAQRISLAGLFDPMPAVAT 98 Query: 150 QRTSLIPHQLNIAH-DVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVP 208 +PHQ+ + ++ R R LLAD+ G GKT+ AG+ L + LL R L++VP Sbjct: 99 SDVRPLPHQIRAVYGELLERRPLRFLLADDPGAGKTVMAGLYLKELLLRDDVRRCLVVVP 158 Query: 209 ETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEH 268 L QW E+ +F L F + A F L+I +D R++Q Sbjct: 159 GGLVDQWQDELFLKFGLGFEVLSPSMADAALGSGV--FAKHPLLIARMDQLARNEQLSAQ 216 Query: 269 LCEAEWDLLVVDEAHHLV----WSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESH 324 L EAE+DL+VVDEAH + + ++ +Q E+L + +LL+TATP E Sbjct: 217 LDEAEFDLVVVDEAHRMGAHHFGGKVNRTKRFQLGERLRDRTRHLLLMTATPHSGKEEDF 276 Query: 325 FARLRLLDPNRFH--------------------DFAQFVEEQKNYRPVADAVAMLLAGNK 364 L LLDP+ F D F VA+ V L+ ++ Sbjct: 277 QLFLTLLDPDGFEGRPDGRGVDTTGMMRRMVKEDLLTFEGRPLFPERVAETVPYRLSEHE 336 Query: 365 LS---------NDELNMLGEMIGEQDIE---PLLQAANSDSEDAQSARQELVSMLMDRHG 412 + +N + ++ L + ++ + LV Sbjct: 337 QDLYEQVTEYVREGMNRAERLEDKRRNTVGFALTVLQRRLASSPEAIHRSLVRRSQRLER 396 Query: 413 TSRVLFRNTRNGVKGF-PKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE 471 L G P LH T + ++ A +A A Sbjct: 397 RRADLLAGRATPEPGPVPATALHGWDDDEHTAEEVERVEEEMVDAATAARTAAELAAELA 456 Query: 472 RIYQEFEGDNAT-WWNFDPRVEWLMGYLTSH--------RSQKVLVICAKAATALQLEQV 522 + + D + L L + +++K++V T L++ Sbjct: 457 ELGALVSAARRVCELDTDRKWVELRRILQDNDLIHPDARQARKLIVFTEHRDTLDHLDRK 516 Query: 523 LREREGI--RAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVM 580 + G H G++ R F +VLL ++ EG N Q A +V Sbjct: 517 IGALFGAPGSVLAIHGGVNRFRRREITEEFTANP-ACRVLLATDAAGEGLNLQAAHMVVN 575 Query: 581 FDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGR 640 +DLP+NP+ +EQR GR+ RIGQ ++ T + + ++ E G Sbjct: 576 YDLPWNPNRIEQRFGRVHRIGQTEVCRLWNLVAVGTREGEVFATLLRKVE--EQRKAYGG 633 Query: 641 TIYDSVYNDLINYLASPDQTEGFDDLIK--NCREQHEA-LKAQLEQGRDRLL--EIHSNG 695 ++D V + D + RE+ E + + G LL + ++ Sbjct: 634 KVFD-VLGSAFDETPLRDLLIAAIRYGERPETRERMERVIDDSVSHGLTELLREQALAHD 692 Query: 696 GEKAQALAESIEEQDDDTN-------LIAFAMNLFDIIGINQDDRGDNMIVLT 741 + LA + ++ + F N F +G R +T Sbjct: 693 VLPGEQLARLRRDMEEARARRLQPHCVEWFFRNAFQRLGGRLVKREKGRFEIT 745 >UniRef50_Q7XQJ0 OSJNBa0005N02.1 protein n=6 Tax=Magnoliophyta RepID=Q7XQJ0_ORYSJ Length = 863 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 106/546 (19%), Positives = 193/546 (35%), Gaps = 67/546 (12%) Query: 154 LIPHQLNIAHDVG---RRHAPRVLLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPE 209 L P+QL + + R++ +LADE+GLGKT++A L L LI+ P Sbjct: 313 LKPYQLVGVNFLLLLHRKNIGGAILADEMGLGKTVQAVTYLTLLRHLYNDPGPHLIVCPA 372 Query: 210 TLQHQWLVEMLRRFNLRFALF---------DDERYAEAQHDAYNPFDTEQLVICSLDFAR 260 ++ W E+ + F++ + + Y P +++ Sbjct: 373 SVLENWERELKKW-CPSFSIIMFHGAGRTAYSKELSSLGKAGYPP--PFNVLLVCYSLFE 429 Query: 261 R----SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATP 316 R K + L W +++DEAH L +D S ++ + +A+H L+LT TP Sbjct: 430 RRSAQQKDDRKALKRWRWSCVLMDEAHVL---KDKGSFRWRNLMAVAQHARQRLMLTGTP 486 Query: 317 EQLGMESHFARLRLLDPNRFH----DFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNM 372 Q + ++ L + P+ F D + + + + + + +L L + ++ Sbjct: 487 LQNDLHELWSLLEFMMPDIFATGDIDLKKLLNAEDH--ELISRIKSILGPFILRRLKSDV 544 Query: 373 LGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRE 432 + +++ + + + + A E R S F N N V PKR+ Sbjct: 545 MQQLVPKIQHVNFVTMDSEQFQAYNYAIDEYRGACQARSAKSTSNFSN--NVVGLIPKRQ 602 Query: 433 LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE----------------RIYQE 476 + + + + I + DR +LYP+ R Y + Sbjct: 603 ISNYFMQFRKIANHPLLIRRIYSDKDV--DRIAKLLYPKGAFGFECSLERATQELRKYND 660 Query: 477 FEGDNATWWNFDP---------------RVEWLMGYLTS--HRSQKVLVICAKAATALQL 519 F D + + L L S + +VL+ L Sbjct: 661 FAIHQLLVSYGDSGTKGALTDEHVLGSAKCQALAELLPSLANDGHRVLIFSQWTTMLDIL 720 Query: 520 EQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMV 579 E L E G+ G + ER F + + LL + G +G N A ++ Sbjct: 721 EWTL-EVIGVTYRRLDGGTPVTERQTIVDTFNNDRSIFACLLSTRAGGQGLNLIGADTVI 779 Query: 580 MFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTG 639 + D+ FNP + Q R RIGQ + I+ + + + L +G Sbjct: 780 IHDMDFNPQMDRQAEDRCHRIGQQKPVTIYRLVTKGSVDENIYEIARRKLVLDAAILQSG 839 Query: 640 RTIYDS 645 + DS Sbjct: 840 AELEDS 845 >UniRef50_Q5P8U4 Helicase/SNF2 family domain protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P8U4_AZOSE Length = 883 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 129/652 (19%), Positives = 246/652 (37%), Gaps = 50/652 (7%) Query: 70 QVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALR 129 ++ + G + + L EV ++ + G + ++ R Sbjct: 9 RITHPRHGQGEVVFGRGETAVARFSHGLEEVRTSELVLVVDLASAISKGDVSPVEL--TR 66 Query: 130 YRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGM 189 RA+ + + R SL+PHQL + H R+ R+L+AD+VG+GKT+EAG+ Sbjct: 67 LRAQAAAIRSVNDAWGVFSRSRISLLPHQLWVCHKALRQWPVRLLIADDVGMGKTVEAGL 126 Query: 190 ILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTE 249 IL L GA +R+L++ P L QW + + + F++R A++ A+A + ++T+ Sbjct: 127 ILWPLLAKGAIKRLLVLTPAKLVEQWQLRLRQMFDIRLAIYT----ADADTPRTDFWNTQ 182 Query: 250 QLVICSLDFARRSKQRLEH--LCEAEWDLLVVDEAHHLVWSED-APSREYQAIEQLAE-- 304 V+ SL + L EWD+++VDEAHHL E+ A + Q +E + E Sbjct: 183 DRVVASLPTLKADNNGRHDRLLSAPEWDMVIVDEAHHLNADENGAKTLGLQLLESMQELG 242 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFH----------DFAQFVEEQKNYRPVAD 354 + +L T TP + ++ + LLD N F + +F+ + Sbjct: 243 KITSCILFTGTPHRGKDYGFWSLMSLLDRNLFSPKKSNSTMLTELPRFLIRNAKQKATDM 302 Query: 355 AVAMLLAGNKLSNDELNMLGEMIGEQDIEPLL----QAANSDSEDAQSARQELVSMLMDR 410 + L K + E + +A S Q + LV + + + Sbjct: 303 SGKRLFQPVKQYPETFEYTPEETAFYSLMSSFVLAGKAYASSLSKTQRGQVILVLIALQK 362 Query: 411 HGTS-----RVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRAR 465 +S R + + G + + + ++ + +R + + Sbjct: 363 LASSSVAAVRSALETRQARLIGTANQYRNELAHETDDPSSDELEHALWEWSRSDRQGKIL 422 Query: 466 DMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH-RSQKVLVICAKAATALQLEQVLR 524 M + A + R++ ++ + + + VL+ T L L Sbjct: 423 LMENEAEHLSDLIA-AAHAVKVETRIQRVIEIIETRFPGRSVLLFTEYKRTQALLMSALI 481 Query: 525 EREGIRA------------AVFHEGMSIIE---RDRAAAWFAEEDTGAQVLLCSEIGSEG 569 G VF +G ++ + R+ F + + L+ +E G EG Sbjct: 482 AHFGDDCVGFINGDNRLDGVVFADGRTLSKSALREDVCDAFNAGE--IRFLISTEAGGEG 539 Query: 570 RNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEG 628 + Q S ++ DLP+NP L QR+GRL+R GQ +++ T +S++ E Sbjct: 540 IDLQEHCSALIHVDLPWNPMRLHQRVGRLNRYGQTQSVEVVSLRNPHTVESMIWEKLEEK 599 Query: 629 LDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQ 680 L + + + ++ E F + E+ + Sbjct: 600 LGNIMLALGSAMDEPEDLLQLVLGMATPGFFNELFAGAAEVPTERLAEWFDE 651 >UniRef50_C4V724 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V724_NOSCE Length = 1262 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 106/599 (17%), Positives = 215/599 (35%), Gaps = 45/599 (7%) Query: 154 LIPHQLNIAHDVGRR--HAPRVLLADEVGLGKTIEAGMILHQQLLS-GAAERVLIIVPET 210 L +QL + + R H ++ADE+GLGKT+++ + ++ VLI+ P + Sbjct: 318 LREYQLEGLNWLLNRWYHKISCIMADEMGLGKTVQSVVFVNSLFTKFNYNGPVLIVAPLS 377 Query: 211 LQHQWLVEMLRRFNLRFALFDDE---RYAEAQHDAY-----NPFDTEQLVICSLDFARRS 262 W E +LR ++ R A+++ Y N ++I + + Sbjct: 378 TLVHWEREFFAWTDLRVLIYHGSIQGRNMIAEYEFYLKSATNKVGLFDVMITTYEMIM-- 435 Query: 263 KQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGME 322 +H+ + W + + DEAH L ++A S+ + + + +LL+ TP Q + Sbjct: 436 -AGFDHISQFNWAVGIFDEAHRL---KNASSKAASTLRNV--NFSHKVLLSGTPLQNNIT 489 Query: 323 SHFARLRLLDPNRFHDFAQFVEEQKNYRPV-ADAVAMLLAGNKLSNDELNMLGEMIGEQD 381 ++ L + P+ F+D A+F+ + K + + + LL L + ++ + +++ Sbjct: 490 ELWSLLNFISPSEFNDSAKFLSDYKLEQAADVEKLQGLLRPLMLRRMKEDVEKTIPMKEE 549 Query: 382 IEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLP 441 ++ ++ ++ + L H S N N + K +H + Sbjct: 550 TIIEVELTMIQKRYYRAILEKNLDFLTKGHKDSAP---NLLNAMMELRKCCIHPYLIKGA 606 Query: 442 TQYQTAI----KVSGIMGARKSAEDRARDMLYPERI-----------YQEFEGDNATWWN 486 + K + A ++ +P I + + Sbjct: 607 EEKIIGDFVKRKKKEAVDAPVVETGDFSELSFPSNINAQKIVIANNIVTDIDEYYKILIQ 666 Query: 487 FDPRVEWLMGYLTS-HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDR 545 ++ L L + KVL+ L + L ++ + G+ R Sbjct: 667 SSGKLVLLDKLLNKLYGHHKVLIFSQMTKCLDLLGEYLAYKK-YKFERIDGGVRGDHRQA 725 Query: 546 AAAWFAE-EDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 A F++ G LLC+ G G N A +++FD +NP Q R RIGQ + Sbjct: 726 AIDRFSDANSDGFVFLLCTRAGGVGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQTN 785 Query: 605 DIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPT----GRTIYDSVYNDLINYLASPDQT 660 +++I+ T + + L G D I L Sbjct: 786 EVKIYRLVTRNTYEREMFDKAGMKLGLDRAVLQKMTFEGHKNEKVKKKDAIEMLLRKGAY 845 Query: 661 EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFA 719 + + ++ E Q+ + R ++++ G ++A + EE DD Sbjct: 846 GVLMETDEASKKFCEEDIDQILERRTKVIKHSDGGNVFSKASFQVDEEIDDPDFWDNLL 904 >UniRef50_UPI00016E800D UPI00016E800D related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E800D Length = 2164 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 106/564 (18%), Positives = 191/564 (33%), Gaps = 47/564 (8%) Query: 154 LIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 L +QL + + R +LADE+GLGKTI++ L + G LII P + Sbjct: 257 LRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIYRMGIKGPFLIIAPLST 316 Query: 212 QHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTE------------QLVICSLDFA 259 W E L ++ + Y + + Q VI + + Sbjct: 317 IANWEREFRTWTYLNAIVYHGSMVSRQMLQQYEMYFRDSQGPCVAECLQIQAVITTFEMI 376 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 L + EW +V+DEAH L ++ + ++ +LLT TP Q Sbjct: 377 LGGCPELNAI---EWRCVVIDEAHRLKNKNCKLLEGFKLM-----NLEHKVLLTGTPLQN 428 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 +E F+ L L+P RF F++E + + + L L L E + E Sbjct: 429 TVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQKL---QGILKPMMLRRLKEDV-E 484 Query: 380 QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 + + P + + + +++ +++++ F G L + Sbjct: 485 KKLAPKEETIIEV--ELTNIQKKYYRAILEKN------FSFLAKGAGQANMPNLVNTMME 536 Query: 440 LPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT 499 L + G A + + R++ P + + + ++ L+ + Sbjct: 537 LRKCCNHPYLIKG---AEEKILEDFREVYNPAAVDFHLQAMVQSAGKL-VLIDKLLPKMK 592 Query: 500 SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV 559 + KVL+ LE L +R + R A F++ D+ V Sbjct: 593 AG-GHKVLIFSQMVRCLDILEDYLIQRR-YLYERIDGRVRGNLRQAAIDRFSKPDSERFV 650 Query: 560 -LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ 618 LLC+ G G N A ++FD +NP Q R RIGQ ++++ + + Sbjct: 651 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYE 710 Query: 619 SVLVRWYHEGLDAFEHTCPTGR------TIYDSVYNDLINYLASPDQTEGFDDLIKNCRE 672 + L + + + I L D + Sbjct: 711 REMFDRASLKLGLDKAVLQSMSGRDNSLAAQQQLSKREIEDLLKRGAYGAIMDEEDEGAK 770 Query: 673 QHEALKAQLEQGRDRLLEIHSNGG 696 E Q+ Q R + + I S G Sbjct: 771 FCEEDIDQILQRRTKTITIESEGR 794 >UniRef50_UPI0001C15F0A hypothetical protein CRC_01468 n=1 Tax=Cylindrospermopsis raciborskii CS-505 RepID=UPI0001C15F0A Length = 964 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 146/737 (19%), Positives = 268/737 (36%), Gaps = 89/737 (12%) Query: 128 LRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEA 187 L A ++ P+ L P+QL R R+L+AD+VG+GKTIEA Sbjct: 76 LLMDAARHLLRSGAGPFRCLGRLSLRPRPYQLVPLLMALRLETVRLLIADDVGIGKTIEA 135 Query: 188 GMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD---ERYAEAQHDAYN 244 G+I+ + L G R+ ++ P L QW E+ +F++ + + A + + Sbjct: 136 GLIVRELLDRGEIARIAVLCPPHLCDQWQQELREKFHIDAVVVRSGTASKLERAIPNGSH 195 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPS---REYQAIEQ 301 F + +I SLD+A+ +++ + D ++VDEAH + + + + +Q I + Sbjct: 196 IFSYYRHIIVSLDYAKSERRKASFIEHCP-DFVIVDEAHTCTRASNKTTSQQQRHQLITE 254 Query: 302 LA-EHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDF--AQFVEEQKNYRPVADAVAM 358 ++ + +LLLTATP ES + L LL F D + E +++ + Sbjct: 255 ISEKRSRHLLLLTATPHSGIEESFLSLLGLLK-AEFADLTLDKLTETERD-----NLAGH 308 Query: 359 LLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLF 418 + + E+ + + + ++ L+ Sbjct: 309 FIQRRRADVKLWLGNQTPFPERQSDEEPYKLSKEYKELFEEVYNFARGLVKTTTVDMTYA 368 Query: 419 RNTRNGVKGFPK-RELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEF 477 + R + + + ++ +G+R+S E R + E Sbjct: 369 QRRGRYWSALALIRCVMSSPAAAISTLNRSLNRESGVGSRESGEMRESENNNYELFSSYV 428 Query: 478 EGDNATWWNFDPRVEWLMG----------------------YLTSHRSQKV--------- 506 D ++ L ++ QK+ Sbjct: 429 YDPTDLEQAVDAAPSVIIEQGLQSYKDVDKRKLRSFIQAAEKLQGNKDQKLQTCTIYVQN 488 Query: 507 --------LVICAKAATALQLEQVLRERE-----GIRAAVFHEGMSIIERDRAAAWFAEE 553 ++ C ATA + + L+++ IR S ER+ Sbjct: 489 LLANNHHPIIWCRYIATANYVAENLKQKLEKKGSQIRVIAITGEQSEDEREVRLNELKSY 548 Query: 554 DTGAQVLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQ-AHDIQIHVP 611 ++L+ ++ SEG N Q S ++ +DLP+NP+ LEQR GR+DR GQ A ++ + Sbjct: 549 PQ--RILVATDCLSEGINLQSHFSAVIHYDLPWNPNRLEQREGRIDRYGQIATQVKSCLL 606 Query: 612 Y-----LEKTAQSVLVRW---YHEGLDAFEHTCPTGRTIYDSVYNDLINY--LASPDQTE 661 Y ++ VL+R H+ L T+ ++V+ L + A Sbjct: 607 YGQDNPVDGAVLEVLIRKAVQIHKTLGITVPVPVDSTTVSEAVFKSLFDKSTDAQQLSLL 666 Query: 662 GFDDLIKNCREQHEALKAQLEQG---RDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF 718 D + H+ +E+ R R + E Q L ES E ++ ++ F Sbjct: 667 DLLDDGSAVEQVHKQWDKAVEREKISRTRFAQKAIKPTEVEQELLESDEILGNEKDVERF 726 Query: 719 AMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDF--PGLSEDGITITFDREVALAREDAQF 776 N + + ++ L PS +P F P L + ITF A E ++ Sbjct: 727 VKNACEKLNCGLIEKKRG--WLLPS----IPSFLQPVLGNEKRLITF---TTPAPEGVEY 777 Query: 777 ITWEHPLIRNGLDLILS 793 + H L+ IL Sbjct: 778 VGRNHLLVEGLARHILE 794 >UniRef50_O74842 Uncharacterized ATP-dependent helicase fft2 n=6 Tax=Ascomycota RepID=FFT2_SCHPO Length = 1284 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 101/577 (17%), Positives = 203/577 (35%), Gaps = 55/577 (9%) Query: 149 GQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLLSGAAERVLII 206 L +QL + + + ++ +LADE+GLGKT + L G L++ Sbjct: 545 ASDVQLKSYQLVGVNWLHLLYQQKLSGILADEMGLGKTCQVVAFFALLLEQGHHGPHLVV 604 Query: 207 VPETLQHQWLVEMLRRFNLRFAL---FDDERYAEAQHDAYNPFD-TEQLVICSLDFARRS 262 VP + WL E+ RF + + ++ +A + +++ + A + Sbjct: 605 VPSSTLENWLRELA-RFCPSLRVEPYYGSQQERANIREAIEENEIKYDILVTTYQLATNN 663 Query: 263 KQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGME 322 K+ L +D+ V DE H+L ++ S Y+ + L + LLLT TP Q ++ Sbjct: 664 KEDRSFLKHQNFDVCVYDEGHYL---KNRMSERYKHLMNL--NANFRLLLTGTPLQNNLK 718 Query: 323 SHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA--VAMLLAGNKLSNDELNMLGEMIGEQ 380 + L + PN F ++ +P ADA LL+ ++S + M ++ + Sbjct: 719 ELVSLLAFILPNMFDSDMDDLDVIFKAKPTADADIEQALLSKQRISRAKTMMTPFVLRRR 778 Query: 381 DIEPLLQAA-------NSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPK--- 430 + L + + Q + L R RN R+ Sbjct: 779 KNQVLNDLPKKTQIIEHCKLSENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKS 838 Query: 431 ----------RELHTIKLPLPTQY--QTAIKVSGIMGARKSAEDRARDMLYPE------- 471 R+ L Y + +++ + + ++ +Y + Sbjct: 839 LSAGHVLMQLRKAANHALLFRKFYDDEKLKQMAKDIMQEEQYKNANEQYIYEDMEVMSDF 898 Query: 472 ---RIYQEFEGDNATWWNFDP-----RVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQ 521 R+ + F + DP ++ L L + + ++L+ LEQ Sbjct: 899 ELHRLCRSFPTLQSYTLKDDPWMDSGKIRVLKELLPKMKEEGSRILLFSQFTQMLDILEQ 958 Query: 522 VLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMF 581 VL + I + R F +E+ LL ++ G G N A+ ++++ Sbjct: 959 VL-DTLKISYVRLDGSTQVEVRQDIIDQFHKEEDVTVFLLSTKAGGFGINLACANVVILY 1017 Query: 582 DLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT 641 D +NP Q R R+GQ ++ + + T + + + + L A + + + Sbjct: 1018 DCSYNPFDDLQAEDRAHRVGQVREVTVIRLITDNTIEEYIQKLANTKL-ALDMSLSSDGK 1076 Query: 642 IYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALK 678 + + L+ + + E K Sbjct: 1077 DREEIGERLVQDMLDEENNGNNTKPEITGNESDGEFK 1113 >UniRef50_Q3M125 Type III restriction enzyme, res subunit n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3M125_ANAVT Length = 900 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 163/754 (21%), Positives = 283/754 (37%), Gaps = 92/754 (12%) Query: 131 RARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMI 190 R + + + R +L+PHQL + V + R L+AD+VGLGKTIEAG+I Sbjct: 69 RVQALAIRSVNDVWGIFSLARIALLPHQLWVCRRVVQELPARCLVADDVGLGKTIEAGLI 128 Query: 191 LHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQ 250 L L GA +R+LI+ P +L QW + F++R + EA + ++T Sbjct: 129 LWTLLSKGAVKRILIVCPASLVEQWQHRLRVMFDIRCTRY----ITEADTLKSDFWNTHH 184 Query: 251 LVICSLDFARRSKQRLEH--LCEAEWDLLVVDEAHHLVWSE-DAPSREYQAIEQLA---E 304 VI SL R++ WDLL+VDEAHHL E P+ Y I++L + Sbjct: 185 QVIASLPTLRKNSGDRHKRLFDAEPWDLLIVDEAHHLNADEQSGPTLGYSFIDKLVNRYK 244 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPV----ADAVAMLL 360 V V+ + TP + F+ L+LL + FH E+ ++ R V + Sbjct: 245 KVRSVVFFSGTPHRGKNYEFFSLLKLLREDLFHPKKLLKEQLQSLRSVMIRNNKQSVTDM 304 Query: 361 AGNKL--------SNDELNMLGEMIGEQDIEPLL--QAANSDSEDAQSARQELVSMLMDR 410 GNKL + + + EQ E +L +A S +D L+ + M + Sbjct: 305 KGNKLFLPLQVRSEIYDYSPEESLFYEQLTEFILTGKAYASGLDDFNQRAVMLILICMQK 364 Query: 411 HGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP 470 +S V R ++G +R + K + + + + ++ Sbjct: 365 LASSSVAA--IRRALEGRLRRIDNNRKQLDKVKQRKQELEQEFNDLEDEEKLNSDEINRL 422 Query: 471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ-----------------KVLVICAKA 513 E E + +PR+ L+ ++ R + +VL Sbjct: 423 EERILELTEMIRLMEDEEPRLRELVQAASAIREETKIQKILDVVANQFTDRQVLFFTEYK 482 Query: 514 ATALQLEQVLREREGIRAAVFHEGMSIIE---------------RDRAAAWFAEEDTGAQ 558 AT L L + G R F G + E R+ AA F + + + Sbjct: 483 ATQSLLMSALVAQYGDRCVTFINGDELAEGVISASNQFISLREKRENAAEKFNKGE--VR 540 Query: 559 VLLCSEIGSEGRNFQ-FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTA 617 L+ +E G EG + Q ++ DLP+NP L QR+GRL+R GQ +++ +T Sbjct: 541 FLISTEAGGEGIDLQENCYSLIHVDLPWNPMRLHQRVGRLNRYGQKRAVEVITLRNPQTV 600 Query: 618 QSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEAL 677 ++++ + +D + + + D DL+ + + F ++ HE L Sbjct: 601 ETLIWDKLNRKIDNIMQSL---QQVMDE-PEDLLQLVLGMTSPKLFREIFSEADRHHEDL 656 Query: 678 KAQLEQGRDRLLEIHSNGGEKAQALAESI---------------EEQDDDTNLIAFAMNL 722 + + GG+ A A + I Q D +L +F + + Sbjct: 657 NQWFDS------KTAKFGGKDAIATVQEIVGSCDKFDFQQVSPLLPQLDLPDLQSFFLTM 710 Query: 723 FDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHP 782 + + +TP E+ + F+R + H Sbjct: 711 LQLNKRRIKFTDEGFSFITPDTWRTESAIQREYEE---VHFNRYRGDKNPAHHLLGVGHK 767 Query: 783 LIRNGLDLILSGDTGSSTISLLKNKALPVGTLLV 816 L L S ++ +++L P+ L+ Sbjct: 768 LFNAALSEATSF---TACVTVLPCIKQPLFIFLI 798 >UniRef50_A9F4G9 Helicase, Snf2 family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F4G9_SORC5 Length = 944 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 145/683 (21%), Positives = 242/683 (35%), Gaps = 73/683 (10%) Query: 19 LGTVVAVDA-RTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQV-----E 72 LGT ++A R P+ R AR D+P P T+ + DG ++ Sbjct: 109 LGTCKHLEAVRRAVAERPAW--RRALARIDAPA-----RPTLTVDAQDGLRLLAVGAWPA 161 Query: 73 EVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSK-PQDRLFAGQIDRMDRFALRYR 131 ++EE L G L G L S++V + P AG I R R Sbjct: 162 SLREERARLVQAGGLLRMASEG-GLGNHAPASRIVHAALPAAERLAGAIW-------RKR 213 Query: 132 ARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMIL 191 R+ + L L P+Q + R R LLAD++GLGKT++A Sbjct: 214 RRRSLDARAGREQGALEALGLPLFPYQREGVLHLFRN--GRALLADDMGLGKTLQAIAAC 271 Query: 192 HQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQL 251 G A RVLI+ +L+HQW E+ R R A+ A Sbjct: 272 ELLRRRGEARRVLIVTAASLKHQWAQEIARWTGERAAVLGGSPAQRTGALAME----AAY 327 Query: 252 VICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLL 311 + S + R RL+ L D+LV+DEA +++ ++ + + + + Sbjct: 328 TVLSYELTWRELSRLKALAA---DVLVLDEAQR---AKNFRTKTAATLRAIPSRF--LFV 379 Query: 312 LTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELN 371 LT TP + ++ +A L+L+DP +F + V G Sbjct: 380 LTGTPVENRLDDLYALLQLVDPALLGPLWRFNADFHRQDERGRIVGYRNLGELRRRVAPV 439 Query: 372 MLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKR 431 L E ++ L + R++ R +R+L R ++ Sbjct: 440 ALRRERAEVLLD--LPPLLEQTRYTPLTREQRELEADYRAQAARLLAIAERRALRKEELD 497 Query: 432 ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRV 491 L + + A ++ P R + + + Sbjct: 498 RLMMMLMKARQACN------------------ALELCDPRRRKKASPKLDE--------L 531 Query: 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA 551 E L+ +T+ KV+V + L +R + A+ H + R F Sbjct: 532 EALIAEVTAQPRNKVIVFSEWVGMLELASERL-DRLRVGHAMLHGDVPTDRRPALLDRFR 590 Query: 552 EEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVP 611 +D +VLL ++ G G N Q AS++V DLP+NP L+QR R R+GQ + + Sbjct: 591 -DDPAVRVLLSTDAGGVGLNLQAASYVVHLDLPWNPARLDQRTARAHRLGQGRSVSVTYL 649 Query: 612 YLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI-------YDSVYNDLINYLASPDQTEGFD 664 E+ + + E + T+ + V ++ LA+ ++ Sbjct: 650 CAEEGIERGIEGILSEKRKVLVASLRADSTVEELSAPSFSVVLREMRQVLAAAEEGAMGA 709 Query: 665 DLIKNCREQHEALKAQLEQGRDR 687 E H AL A+ + G R Sbjct: 710 AAEGVAEEVHAALPAEGDAGGGR 732 >UniRef50_Q9V0B0 Putative DEAH ATP-dependent helicase n=1 Tax=Pyrococcus abyssi RepID=Q9V0B0_PYRAB Length = 973 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 128/635 (20%), Positives = 253/635 (39%), Gaps = 77/635 (12%) Query: 127 ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIE 186 AL +S F M + ++ HQL + + R+ +ADE+GLGKTI+ Sbjct: 6 ALLRELVLHSPNLFYMSLAWPGRKKIEPFLHQLQPLYHAMIQRPVRMFIADEIGLGKTIQ 65 Query: 187 AGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF 246 A I L G A+R+LI+VP+ L+ QW E+ R + + + E++ F Sbjct: 66 ALAIARYLNLKGEAKRILILVPKILREQWREEV-ERLGIIPIVIESGAEVESKLRRKEGF 124 Query: 247 DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHV 306 I S+D A+ + R + E EWDL+++DEAH++ ++ Y+ ++ L Sbjct: 125 -----FIVSIDLAKMPEHR-DKFLEKEWDLVIIDEAHNVTL----GTQRYEFVKDLVGKN 174 Query: 307 P--GVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGN- 363 V+ L+ATP + + + ARL LLDP D+++ ++ Q+ YR + + Sbjct: 175 KDLNVIFLSATPHRGDPKDYLARLTLLDPTLIDDYSK-LDSQEFYRRTMGTIIFRRTKSI 233 Query: 364 ------------------------------KLSNDELNMLGEMIGEQDIEPLLQAA-NSD 392 + ND L+ L + + + LL N Sbjct: 234 VNELEGENIFRKCYFGAIVVGITEEEKEFFRRLNDVLSKLVKNTQKNSPQALLAVLVNKR 293 Query: 393 SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSG 452 + + S+ + ++ +++ + V R+ ++ + L ++Y I Sbjct: 294 ASSSYSSAMKTLNKIVESYSVREVNLGKVRDYIERLFGLGYEDVNLEGFSEYDDVIDKII 353 Query: 453 IMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVIC 510 + E + R+ D D ++ + + H R +KV++ Sbjct: 354 EEYSAVLQESQVREFRELL--------DVLKRIKMDTKLNIVANVVKQHVERGEKVIIFT 405 Query: 511 AKAATALQLEQVLREREGIR---AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGS 567 T L + L G+ ++ H GM + + F + ++L+ +++ S Sbjct: 406 EFKDTLEYLRKNLPSLAGLSDEDVSILHGGMPSGKVEEEIRKF---EKHGKLLISTDVAS 462 Query: 568 EGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHE 627 EG N Q A+ ++ ++ P+ P LEQR+GR+ RI Q D++ + +L+ ++ + Sbjct: 463 EGLNLQVANVLINYEAPWTPIKLEQRVGRVWRINQKRDVKAYTIFLDTEVDMYVLNNLYR 522 Query: 628 GLDAFEHTCPTGRTI-------------YDSVYNDLINYLASPDQTEGFDDLIKNCREQH 674 + + G + ++ ++ D+ + ++ +D R + Sbjct: 523 KIMNIKEAIGGGPRVGIPVLAEKILEGDFEKIWKDIPGDFEAREKISEYDIGYAILRREI 582 Query: 675 EALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQ 709 E K + L S G Q E+I+ + Sbjct: 583 EGYKRAILNTLRIL--RQSIRGAVPQERVENIKRE 615 >UniRef50_Q54Q16 Chromo domain-containing protein n=2 Tax=Eukaryota RepID=Q54Q16_DICDI Length = 1917 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 107/580 (18%), Positives = 203/580 (35%), Gaps = 78/580 (13%) Query: 154 LIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPET 210 L +Q+ + + V+LADE+GLGKTI+ L L++VP + Sbjct: 755 LRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSYLFNEQDIKGPFLVVVPLS 814 Query: 211 LQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDT---------EQLVICSLDFAR 260 W E + + ++ + Y + T +++ + DF Sbjct: 815 TIENWQREFAKWAPAMNVIVYTGTGQSRDIIRLYEFYTTNRLGKKKLNFNVLLTTYDFIL 874 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG 320 + K L + +W+ L VDEAH L +++ S ++ ++ + LL+T TP Q Sbjct: 875 KDKNTLGTI---KWEFLAVDEAHRL---KNSESVLHEVLKL--YNTTNRLLVTGTPLQNS 926 Query: 321 MESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 ++ + L L PN+F F ++ + + ND++ L ++ Sbjct: 927 LKELWNLLNFLMPNKFTSLKDFQDQYSDLKE---------------NDQIAQLHSVLK-- 969 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPL 440 LL+ D E + + E + RV N + K + + Sbjct: 970 --PHLLRRIKKDVEKSLPPKTERIL---------RVDLSNVQK--KYYKWILTKNFQELN 1016 Query: 441 PTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS 500 + + ++ + +K+ + + + ++ L L Sbjct: 1017 KGKGEKTTLLNIMTELKKTCNHPYLYQNARDECELGAKDLLDSMIRASGKLVLLDKLLIR 1076 Query: 501 HR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ 558 + +VL+ L L+ R + MS +R +A F D+ Sbjct: 1077 LKETGHRVLIFSQMVRMLDILADYLKGRS-FQFQRLDGSMSREKRSQAMDRFNAVDSPDF 1135 Query: 559 -VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTA 617 LL ++ G G N A +++FD +NP Q R RIGQ + + I+ + + Sbjct: 1136 CFLLSTKAGGLGINLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNHVNIYRLVSKSSV 1195 Query: 618 QSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEAL 677 + ++ + + V + L+ QT + + E L Sbjct: 1196 EEDILERAKQKM----------------VLDHLVIQTMEKSQTAKSNTPNNSNVFNKEEL 1239 Query: 678 KAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIA 717 +A L+ G + L E + A IEE D D L Sbjct: 1240 EAILKFGAEELF------KETGEE-ANPIEEMDIDEILSR 1272 >UniRef50_A0C011 Chromosome undetermined scaffold_14, whole genome shotgun sequence n=4 Tax=Paramecium tetraurelia RepID=A0C011_PARTE Length = 1668 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 116/605 (19%), Positives = 221/605 (36%), Gaps = 76/605 (12%) Query: 125 RFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLG 182 R L + ++ ++ + R L +QL+ + + R V+LADE+GLG Sbjct: 519 RNQLYFLNQRKPPHEYTQLTQTIYKDRRLLRDYQLDSLNWLIRAWYEDRNVILADEMGLG 578 Query: 183 KTIEAGMILHQQL-LSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH- 240 KTI+ L+ LII P + W + NL L+ D+ + + Sbjct: 579 KTIQTIAFLNHLYNFENYRGPFLIIAPLSTLQHWKRTVEEWTNLNAVLYYDQESSAGRAL 638 Query: 241 -DAYNPFDT----------------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAH 283 Y F T Q++I S + + Q + + +VVDEAH Sbjct: 639 CRQYEFFYTDISMKGIVLQASEIYKFQILITSYEVFMQDFQAI--FINIPFQYIVVDEAH 696 Query: 284 HLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFV 343 L +++ +R Q++++L LLLT TP Q E F+ L ++P +F + F Sbjct: 697 KL---KNSNARILQSLKKLC--CQRTLLLTGTPIQNNTEELFSLLNFIEPYQFSNLISFK 751 Query: 344 EEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQEL 403 E ++D++ L ++ +L+ D E QE Sbjct: 752 REYGQLE---------------TSDQVEKLNVLLK----PYILRRQKEDVEQMIPPLQET 792 Query: 404 VSML----MDRHGTSRVLFRNTRNGVKGFPK-----RELHTIKLPLPTQYQTAIKVSGIM 454 + + + +H + RN +GF + L+ +++ L + + Sbjct: 793 IIDIEMTTIQKHIYKALYERNKSMLEQGFSQWAANAASLNNLEIQLRKCCNHPFLIQEMQ 852 Query: 455 GARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ--KVLVICAK 512 D + ++ L L R++ K+L+ Sbjct: 853 NDLTKGCSNKNDYI-------------LKLVECSGKMILLDKLLNKFRNEGKKMLIFSQF 899 Query: 513 AATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRN 571 LE+ L+ R+ ++ + ER A F + +V LL ++ G +G N Sbjct: 900 TMMLSILEEYLKFRQ-VKYEKIDGQIKARERQNAIDRFNDPQKKREVFLLSTKAGGQGIN 958 Query: 572 FQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDA 631 A +V++D +NP Q R RIGQ+ ++ ++ + T ++ + + L Sbjct: 959 LTAAEIVVIYDSDWNPQNDVQATARAHRIGQSKEVTVYRLITKDTYEAEMFERAIKKLGL 1018 Query: 632 FEHTCPTGR--TIYDSV-YNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRL 688 + +G+ + S N ++ D + I ++ E+ D + Sbjct: 1019 DQAIFMSGQFKSCESSFKINKNDKKMSKQDMEVLLKNGIIGLISHNQNGDTFQEKNIDEI 1078 Query: 689 LEIHS 693 LE +S Sbjct: 1079 LEKNS 1083 >UniRef50_A4S9B5 Predicted protein n=2 Tax=Ostreococcus RepID=A4S9B5_OSTLU Length = 589 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 106/588 (18%), Positives = 209/588 (35%), Gaps = 48/588 (8%) Query: 157 HQLNIAHDVGR--RHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +QL + + ++ +LAD++GLGKT++ L G L+I P + Sbjct: 25 YQLKGVNWMISLYQNGLNGILADQMGLGKTVQTIGFLSHLRSKGVLGPYLVIGPLSTLSN 84 Query: 215 WLVEMLRRF-NLRFALFDDERYAEAQHD-AYNPFDT-----EQLVICSLDFARRSKQRLE 267 W+ E R ++ L+ R A+ + P T +++ S + ++ Sbjct: 85 WVSEFQRWTPSIPVLLYHGTRQERAEKRIEFLPTSTPIKPDFPVIVTSYEVVMADRK--- 141 Query: 268 HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 L + + LVVDE H L ++ + + ++ + LLLT TP Q + ++ Sbjct: 142 FLAKYNFKYLVVDEGHRL---KNFDCKLIRELKYIP--TANKLLLTGTPLQNNLPELWSL 196 Query: 328 LRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEP-LL 386 L L P+ F +QF + + + + E + P LL Sbjct: 197 LHFLLPDVFSSLSQFQSWFDFADNIGNDESQEQEVVDKNEQEHRARVVSKLHGILRPFLL 256 Query: 387 QAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQ- 445 + D E + ++E++ L+ K F ++ + T++ Sbjct: 257 RRLKGDVELSLPRKKEIL------------LYAQMVPKQKEFNDALVNKTITEMLTKFAG 304 Query: 446 TAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNA-----TWWNFDPRVEWLMGYLTS 500 + G ++ +P+ I +G +++ L +T Sbjct: 305 NSHIPVGHTAVNNMLMQLRKNCNHPDLITGGLDGSIMFPSADELVEQCGKMQLLDRLMTR 364 Query: 501 HR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ 558 R KVL+ LE ++R G + +R A F E+ Sbjct: 365 LRARGHKVLIFSQMTRMLDLLESFFQQR-GEPVCRIDGSVKQDDRREFIARFNEDPKYGI 423 Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ 618 LL + G G N ++++D +NP Q + R+ RIGQ + ++ K+ + Sbjct: 424 FLLSTRAGGLGINLTGGDTVIIYDSDWNPHQDLQAMDRVHRIGQTKPVHVYRLATAKSVE 483 Query: 619 SVLVRWYHEGLDAFEHTCPTGRTIYD------SVYNDLINYLASPDQTEGFDDLIKNCRE 672 +++ L + G + + D + L + +D ++ Sbjct: 484 GKMLKKAASKLALEKLVVTNGGFKQEKNDDGRAFGADELMALLKGETGANDEDSPQSANI 543 Query: 673 QHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 + L+ L++ RD L EI N E IE++ + L + Sbjct: 544 SDKDLEIILDR-RDLLGEIPPNPPRGIG--FEEIEDRSGMSLLGNVSE 588 >UniRef50_A2QRG3 Contig An08c0130, complete genome n=9 Tax=Trichocomaceae RepID=A2QRG3_ASPNC Length = 841 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 102/629 (16%), Positives = 213/629 (33%), Gaps = 80/629 (12%) Query: 131 RARKYSSEQFRMPYSGLRGQRT------------SLIPHQLNIAHDVGRRHAPRV--LLA 176 A +++++++ + L GQ ++ +QL + + +LA Sbjct: 190 EALEHAADEYEANPTALGGQELVATQQPELVTGGTMKKYQLEGLEWLKSLWMNGLCGILA 249 Query: 177 DEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERY 235 DE+GLGKT++A ++ + LI P + W+ E + ++ L+ R Sbjct: 250 DEMGLGKTVQAISLIAFFKEKNISGPFLIAAPLSTVSNWVDEFAKWTPEIKTVLYHGTRD 309 Query: 236 AEA--QHDAYNPFDT----EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSE 289 A + N D +V S + ++ L + +W ++VDE H L + Sbjct: 310 ERATIRRKFMNMKDQRSADFPVVCTSYEICMNDRK---FLAQYQWRYIIVDEGHRL---K 363 Query: 290 DAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEE---- 345 + + + + L + LL+T TP Q + ++ L L P F+D F Sbjct: 364 NMNCKLIKEL--LTYNSANRLLITGTPLQNNITELWSLLHFLLPEIFNDLNSFQSWFDFS 421 Query: 346 ------------QKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS 393 ++ R + + +L L + ++ + +++ Sbjct: 422 SMLDNNGQTDVMERRKRTLVSTMHSILKPFLLRRVKTDVETSLPKKREYILYAPLTAEQK 481 Query: 394 EDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLP----------TQ 443 + + ++ T R++ ++ R KR T P T Sbjct: 482 DLYREILNGTGRQYLEEKATERLMAKSGRPSRSQSLKRSADTSGASSPNKSLKSSRSSTP 541 Query: 444 YQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDP------------RV 491 TA+ S G ++ A+ + ++ + R+ + W DP ++ Sbjct: 542 ASTALPTSRRRGKKEIAQKKMQNPIMQARLACNSPHNFYWPWMDDPTSIDETLVTASGKM 601 Query: 492 EWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAW 549 L + ++ K+L+ L+ + +S +R Sbjct: 602 LLLDRLVPCLLNKGHKILIFSQFKTQLDILQDWATQLRSWNCCRIDGAVSQEDRRAQIKA 661 Query: 550 FAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 F + LL + G +G N A +++FD +NP Q R RIGQ + ++ Sbjct: 662 FNTDKNYKLFLLSTRAGGQGINLMAADTVILFDSDWNPQQDLQAQDRAHRIGQTKPVIVY 721 Query: 610 VPYLEKTAQSVLVRWYHEGLDAFEHTCPTGR--------TIYDSVYNDLINYLASPD--- 658 + T + L+ G+ ++ + +DL L + Sbjct: 722 RLATKGTVEQTLLEKADSKRRLERLVIQKGKFRSLLDPGSLSSNDVDDLKKALGQDEYET 781 Query: 659 QTEGFDDLIKNCREQHEALKAQLEQGRDR 687 G D ++ + L + E+ R Sbjct: 782 FEAGADPATLLSKKDLDILTDRSEEAYVR 810 >UniRef50_A7VHM1 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A7VHM1_9CLOT Length = 862 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 131/655 (20%), Positives = 236/655 (36%), Gaps = 93/655 (14%) Query: 136 SSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHA-PRVLLADEVGLGKTIEAGMILHQQ 194 E PYS L + PHQ+ +LADEVGLGKTIEAG+++ Sbjct: 13 QQELKNNPYSCLHMADIDINPHQVEAFTFALSSLKLGGAILADEVGLGKTIEAGLVIKYL 72 Query: 195 LLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVIC 254 L SG ++L+I+P L+ QW VE+ +F++ + D + + + + ++I Sbjct: 73 LCSGK-NKILLIMPSNLRKQWQVELEEKFDIDSLIVDSSNWEDYLAKVKS---KQAVIIA 128 Query: 255 SLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTA 314 S FA + K + WD V DEAH L S+ ++ +L + +P +LLTA Sbjct: 129 SYHFASKRKAEFGKIA---WDFCVFDEAHRLRNVYKNGSKMANSLYELTKGIP-KILLTA 184 Query: 315 TPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ---KNYRPVADAVAMLLAG--NKLSNDE 369 TP Q + + ++ +D F+ F E ++Y + + ++ K + Sbjct: 185 TPMQNTLLDIYGLVQFIDDRVFYSKQIFSERYLRGEDYNDLKACLEPVVQRTLRKEVAEY 244 Query: 370 LNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGT------------SRVL 417 + D E ++E++ L + H T S + Sbjct: 245 IQFSERKEMTIDFELSPMEIELYVMINNYLKKEILYALPNSHRTLITSVIRKLLASSSMA 304 Query: 418 FRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEF 477 T +KG + T + + + +D +D LY EF Sbjct: 305 VAETFKVLKGRLETLKETTRTESADESIDFFLSFFDDDEIEKDDDSKQDELYTREKVNEF 364 Query: 478 EGDN----------ATWWNFDPRVEWLMGYLTS--------HRSQKVLVICAKAATALQL 519 A + ++ L + Q+++V T + Sbjct: 365 IQHEIDEVTAIINKAESIKRNAKMTALKQAVEKAFVFQNEAGIKQRIVVFTESIRTQQYM 424 Query: 520 EQVLREREGIR--------------------------AAVFHEGMSIIERDRAAAWFAEE 553 + L G + ++ ++ F +E Sbjct: 425 FEEL-SHAGYEGQILKFNGSTNDPVTKQIYKAWKARNYGKYVGSRNVELKNAIVEAFRDE 483 Query: 554 DTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPY- 612 ++LL ++ GSEG N QF + ++ +DLP+NP +EQRIGR R GQ +D+ + Sbjct: 484 ---YKILLVTDSGSEGLNLQFCNTIINYDLPWNPQKIEQRIGRCHRYGQKNDVVVINLLN 540 Query: 613 LEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFD----DLIK 668 + A + E + F+ L+ A ++ Sbjct: 541 TQNVADKRVYEILSEKFELFQGVFGASDKAIG-----LLESGADFEKRVTLIYQECKTTS 595 Query: 669 NCREQHEALKAQLEQGRD-RLLEIHSNGGEKAQA--------LAESIEEQDDDTN 714 + +Q + L+ +LE+ R+ ++ E+ S K + + E I E D Sbjct: 596 DFTKQFKNLEKELEKKRNKKMDELKSIFTYKTEEQHKLHFNSIMEEIAEYDSQFE 650 >UniRef50_A2DAM4 Type III restriction enzyme, res subunit family protein n=1 Tax=Trichomonas vaginalis RepID=A2DAM4_TRIVA Length = 1468 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 110/575 (19%), Positives = 210/575 (36%), Gaps = 51/575 (8%) Query: 153 SLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLS-GAAERVLIIVPE 209 L +Q++ + + + +LADE+GLGKT+ +L + G LI+ P Sbjct: 312 QLRDYQIDALNWLRASYQTGQNAILADEMGLGKTVMCISLLLDICQNCGVDGPFLIVAPL 371 Query: 210 TLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF--------DTEQLVICSLDFARR 261 W+ E N+ LF + Y F Q+++ +++ + Sbjct: 372 GTLPNWIREFESWSNIDTILFHGSQQDRDLIAEYELFYKPPRQNIPKFQVLLTNIETVLK 431 Query: 262 SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGM 321 S++ ++ + +W+L+++DEAH L ++ S+ Y + L + VLL+T TP Q + Sbjct: 432 SQEVIQKI---QWNLVIIDEAHRL---KNLNSKIYSVMFSL--QMDHVLLMTGTPIQNNI 483 Query: 322 ESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQD 381 + FA + + P +F +F +E + D + + + ML + + Sbjct: 484 DEIFALMHFIAPLKFPSLEEFKKEHGSIETAEDVERI------QNAIKPYMLRRKKCDVE 537 Query: 382 IEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLP 441 L+ + +++ +L+DR K + H + L Sbjct: 538 STIGLKEETIVEVELTRSQKFYYRLLIDRKT-------------KDLTTHKSHALSQDLN 584 Query: 442 TQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH 501 KV + E E I + E N N ++ ++ L Sbjct: 585 NLAMQLRKVCNHPYLFPNVE---------EEIVKPGEDPNEAMINASGKLVFVDKLLAKL 635 Query: 502 RS--QKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV 559 R KVL+ LE+ L R + R + F + + V Sbjct: 636 RPKGDKVLIFSQMVHVLDILEEYLHYR-NYPYVRLDGSVVGDVRQESIDKFNDPEKDIFV 694 Query: 560 -LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ 618 LLC+ G G N A++++++D +NP Q R RIGQ HD++++ T + Sbjct: 695 FLLCTRAGGVGLNLTAATNVIIYDSDWNPQNDLQAQARCHRIGQTHDVKVYRLITRGTYE 754 Query: 619 SVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALK 678 S + L + +G+ + I L F++ + Sbjct: 755 SDMFTRASMKLGLDQAILDSGQNAAQEMTPKEIETLIKRGAYYIFNEDDDAGDKFVTEDV 814 Query: 679 AQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDT 713 Q+ + R L E A + + I ++D + Sbjct: 815 DQILENHTRTLSKSVVDQESAFSRTQFIIDKDGEQ 849 >UniRef50_C8NCL6 Helicase/SNF2 domain protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCL6_9GAMM Length = 937 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 142/640 (22%), Positives = 228/640 (35%), Gaps = 105/640 (16%) Query: 145 SGLRGQRTSLIPHQLNIAHDVGRRH-APRVLLADEVGLGKTIEAGMILHQQLLSGAAERV 203 L + L PHQ++ A + V+LADEVGLGKTIEAG+ L Q R+ Sbjct: 33 GALMNAQVDLHPHQIDAALFALKHPLHEGVMLADEVGLGKTIEAGLTLCQLWAE-RRRRL 91 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSK 263 L++ P +L+ QW E+ +F L + + P + ++I S +FAR+ Sbjct: 92 LVVCPASLRKQWQEELYEKFALPGVI----------AEGSLPPFADGVLIMSYEFARK-- 139 Query: 264 QRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMES 323 L A+WD +V+DEAH L + ++ QA+ +A LLLTATP Q + Sbjct: 140 -YAALLQAADWDCVVLDEAHKLRNAYKDSNKIGQALR-IAFAGKKKLLLTATPLQNSLME 197 Query: 324 HFARLRLLDPNRFHDFAQFVEE------------------QKNYRPVADAVAMLLAGNKL 365 + LDP F D QF + Q+ R + L Sbjct: 198 LYGLSLFLDPYLFGDAKQFRHDFITQKNSDALRLRLRGFVQRTLRRDIREYVSFTQRHAL 257 Query: 366 SNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDR---------HGTSRV 416 + E Q++ LQ N+ + ++ L M++ + GT V Sbjct: 258 TQQFTPRDDEHALYQNVSTFLQRENAYA--LPRRQRHLTGMILRKLLASSPFAVLGTLEV 315 Query: 417 LFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQE 476 + R +G +E + L + + + D R + Sbjct: 316 MRSRLRALQQG--AQEDALLALFPDEDVYDSAEEWEEAEEPPESPDAKRLAEEITLLEGF 373 Query: 477 FEGDNATWWNFDPRVEWLMGYLTS--------HRSQKVLVICAKAATALQLEQVLREREG 528 D + + L+ L + QK ++ T L L+E G Sbjct: 374 IAQAQRLCSGADSKAQALLEALQTGFARMAELEAKQKAIIFTESTRTQQHLAAFLQE-NG 432 Query: 529 IRAAV----------------------------FHEGMSIIERDRAAAWFAEEDTGAQVL 560 + V +S +R F + AQ++ Sbjct: 433 YKGQVVLFNGTNNDAAARAIYEAWQVNPANRNRITGAVSADKRAALIDRFRHD---AQIM 489 Query: 561 LCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPY-LEKTAQS 619 + +E +EG N QF S ++ +DLP+NP +EQRIGR R GQ D+ + A Sbjct: 490 IATEAAAEGVNLQFCSLLINYDLPWNPQRVEQRIGRCHRYGQESDVVVINFLNRRNEADK 549 Query: 620 VLVRWYHEGLDAFEHTCPTGRTIYDSVYN----------DLINYLASPDQ-TEGFDDLIK 668 ++ E F I V N + + +P + FD L Sbjct: 550 RILELLTEKFQLFSGLFGASNDILGRVENADLDFEKRVAQIFDNCRTPQEIDRAFDQLQA 609 Query: 669 NCREQHEALKAQLEQ------GRDRLLEIHSNGGEKAQAL 702 + E A AQ E +D + ++ + E Q L Sbjct: 610 DLEEAISARLAQTEATMHDALDQDVIERLNLSRAEIDQRL 649 >UniRef50_A9TXL2 SWI/SNF class chromatin remodeling complex protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TXL2_PHYPA Length = 2174 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 130/706 (18%), Positives = 248/706 (35%), Gaps = 66/706 (9%) Query: 38 GENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVAL 97 +R+ A ++ V + +T + + +E G L +G +L ++ L Sbjct: 1363 QRDRINALKNNDVAGYLRMVQETKSDRVEKLL-----RETEGYLQKLGVKLQKQKELARL 1417 Query: 98 REVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRM-------PYSGLRGQ 150 ++ VF A Q D D + + L G Sbjct: 1418 ENDHSENNSVFE------VAKQPDAKDNTQHYLESNENYYSLAHSVKEIVDEQPLTLEGG 1471 Query: 151 RTSLIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIV 207 + L +QL+ + + +LADE+GLGKT++ ++ + LI+V Sbjct: 1472 K--LREYQLSGLRWLVSLYNNHLNGILADEMGLGKTVQVIALICYLMEAKNDHGPFLIVV 1529 Query: 208 PETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYN---PFDTEQLVICSLDFARRSKQ 264 P ++ WL E+ R R ++ + + Y +++ + +F SK Sbjct: 1530 PSSVLPNWLAELSRW-APRVSVIAYCGAPDERRRLYKEEIQPQQFNVLVTTYEFLM-SKH 1587 Query: 265 RLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESH 324 L + W +++DE H + ++A + ++Q LLLT TP Q +E Sbjct: 1588 DRPKLAKIPWHYIIIDEGHRI---KNASCKLNAELKQ--YQSTHRLLLTGTPIQNNLEEL 1642 Query: 325 FARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEP 384 +A L L P+ F+ F + +P + L +E N+L Q + P Sbjct: 1643 WALLNFLLPSIFNSSDDFAQWF--NKPFENVADPTAEEQALLTEEENLLIINRLHQVLRP 1700 Query: 385 LLQAANSDSEDAQSARQELVSMLMDRHGT--SRVLFRNTRNGVKGF---PKRELHTIKLP 439 + ++ E + L+ + ++L ++ ++ +K R + + Sbjct: 1701 FM--LRRLKHKVENELPEKIERLVRCEASAYQKLLMKHVKDKMKSLNHAKGRSIQNTVME 1758 Query: 440 LPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWL---MG 496 L + S E + I F G P+++ + Sbjct: 1759 LRNICNHPY-----LSQLHSEETEKVLPPHYLPIVVRFCGKLEMLDRILPKLKAANHKVS 1813 Query: 497 YLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTG 556 +TS + VL +E L E +G + ER F + Sbjct: 1814 LMTSRKGHSVLFFSTMTRLLDVMEDYL-EWKGYKYLRLDGSTGGSERGALIQDFNAPQSE 1872 Query: 557 AQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEK 615 A + LL G G N Q A +++FD +NP + Q R RIGQ D+ + K Sbjct: 1873 AFIFLLSIRAGGIGINLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVK 1932 Query: 616 TAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHE 675 + + + L + G ++D ++ D+ E + L++ +++ Sbjct: 1933 SIEEHVRASAEYKLGVANQSITAG------FFDD---NTSAEDRREYLESLLREPKKEEV 1983 Query: 676 ALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 AL E D L + + E++++Q IAF Sbjct: 1984 ALVLDDEALNDLL-----ARSDAEIDIFEAVDKQRAQEEQIAFLDQ 2024 >UniRef50_Q5P890 Helicase (Snf2 family) n=10 Tax=Bacteria RepID=Q5P890_AZOSE Length = 965 Score = 310 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 181/925 (19%), Positives = 312/925 (33%), Gaps = 129/925 (13%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH-APRVLLADEVGL 181 +A R +SE+ R+ S L L PHQ++ A + V+LADEVGL Sbjct: 12 AKYYAWELTRRHAASEEGRLSQS-LFDASVDLNPHQIDAALFALENPLSKGVMLADEVGL 70 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEA +++ Q R+L+I P L+ QW E+ +FN+ + D + + + Sbjct: 71 GKTIEAALVMCQLWAE-RRRRLLVICPAALRKQWAQELSDKFNVPAQVLDARTWLRLRQE 129 Query: 242 A-YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 Y P D + + I SL+FA R + L WDL+V+DEAH L + Q+++ Sbjct: 130 GIYEPLDRDVISIMSLNFAARMEA---QLGSVPWDLVVIDEAHKLRNAHRKSHETGQSLK 186 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 + + LLLTATP Q + + L+D + F D F + N A+ L Sbjct: 187 R-SLAGRRKLLLTATPLQNSLLELYGLSSLIDEDIFGDERSFRAQYGNSGGDLIALRRRL 245 Query: 361 AG---NKLSNDELNMLGEMIGEQDIEPLLQA-------------ANSDSEDAQSARQELV 404 L D L + P + D RQ+ + Sbjct: 246 QPFVKRTLRKDVLEYVPYTRRHALTTPFTPSDDEQRLYDLISAYLQCDFSYGFPQRQKHL 305 Query: 405 SMLMDR----HGTSRVL--FRNTRNGVKGFPKRE----------LHTIKLPLPTQYQTAI 448 L+ R T V+ R+ ++ +R+ + +L A Sbjct: 306 VALILRKLLASSTEAVVTTLEAIRDRLQKLFERQSIGADWFEHLVEGDELDEELLEAAAE 365 Query: 449 KVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS-------- 500 A ++ D+L E + + A D + L+ L Sbjct: 366 DAEAAAAAGENPAGIDFDLLRSEMVELDTYISIAHGIREDQKSHALLNALEQGFARLADM 425 Query: 501 HRSQKVLVICAKAATALQLEQVLREREGI-RAAVFHEGMS-------------------- 539 +K ++ T L + L + F G Sbjct: 426 GAPRKAVIFTESRRTQEYLARFLEAHGHAGKVVTFSGGNQGTGATGIYQRWLARYAGSDR 485 Query: 540 ------IIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQR 593 + R +F E A++L+ +E +EG N QF S +V +DLP+NP +EQR Sbjct: 486 ATGSPAVDRRTALIDYFRE---HAEILIATEAAAEGVNLQFCSLVVNYDLPWNPQRVEQR 542 Query: 594 IGRLDRIGQAHDIQIHVPY-LEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYD------SV 646 IGR R GQ D+ + A ++ + F+ I Sbjct: 543 IGRCHRYGQRFDVVVINFLNQRNEADRRVLELLQDKFRLFDGVFGASDEILGRIEAGIDF 602 Query: 647 YNDLINYLASPDQTEGFDDLIKNCR-EQHEALKAQLEQGRDRLLEIHSNGGEKAQALAES 705 + + D + R E ++A++++ LLE + L Sbjct: 603 EKRIAEIYDRCRTPQEIDAAFADLRAELDADIQARMQETEKLLLEH--FDADIHNLLKTH 660 Query: 706 IEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDR 765 ++ I LF ++ + + + +P P + + R Sbjct: 661 ---RERAETQIDRISRLFWLLTRHVLAGKARFDARQLAFDLALPPLPHIPAGHYQLI--R 715 Query: 766 EVALAR----EDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYV 821 + AR E + HPL LD G + + TL + Sbjct: 716 KGESARQAPPEHTRIYRLTHPLGEYVLDQ------GRNAAAA-------DATLQFDYARW 762 Query: 822 VEAQAPKQLQLNRFLPPT--PVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGS---KL 876 +EA+ P+ + R + LL+ + + F +++ T +L Sbjct: 763 LEARNPRISVIERLVGQNGWLQLNLLELDSFQREEHLVFTAQADSGELLDQETCEKLFQL 822 Query: 877 VNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDEL 936 + +VQ A + + A + A + D+ E +L+A Sbjct: 823 MASVQPAAGAAPEALHGNARRQLDAALSRALEQNDKYFQQEREKLDAWA----------- 871 Query: 937 TAIESNRQQVMESLDQAGWRLDALR 961 + ++L RL L+ Sbjct: 872 ---DDRILAAEQALQDTKLRLKGLK 893 >UniRef50_C6IYV2 Non-specific serine/threonine protein kinase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYV2_9BACL Length = 1053 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 108/531 (20%), Positives = 201/531 (37%), Gaps = 59/531 (11%) Query: 145 SGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAER 202 SGL G +L P+Q + R LLAD++GLGKT++ +L + A+ Sbjct: 568 SGLNG---TLRPYQERGYQWLVTMRELGFGALLADDMGLGKTVQVISVLLDGVQQAGAKS 624 Query: 203 VLIIVPETLQHQWLVEMLRRFNLRFALF---DDERYAEAQHDAYNPFDTEQLVICSLDFA 259 LII P +L W E RF L+ +RY E + + +V+ + A Sbjct: 625 -LIICPTSLLGNWQREF-SRFAPGLKLYVHHGSDRYREER--FLQEYRACDVVLTTYQLA 680 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 R + L AEW +V+DEA ++ ++ +++ Q++ +L+ P + +T TP + Sbjct: 681 GRDAKE---LRSAEWTTVVLDEAQYI---KNYGTKQAQSVMKLS--APHRIAMTGTPVEN 732 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 + ++ + L+P A F A + ++ L L Sbjct: 733 RLSELWSIFQFLNPGYLGTHASFRTRYTGSGGEQQAAELQKLRKLVAPFLLRRLKSDPDI 792 Query: 380 QDIEP---LLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTI 436 + P L++ S + + Q + + L+D+ G+ + R + Sbjct: 793 RKDLPEKIELKSYCSLTVEQARLYQSVTAELLDQIGSQSGIAR--------------KGL 838 Query: 437 KLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMG 496 L T+ + +PE + A + ++E L Sbjct: 839 VLSSLTRLKQICD-------------------HPELVVGSRPAKTAA-FGRSGKMERLGE 878 Query: 497 YLT--SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEED 554 L + L+ L++ L ER G+R H G+ ERD+ F E + Sbjct: 879 LLDMIMDNGEGALIFTQYVRMGELLQERLTERYGVRPFFLHGGVPKAERDQMVRAFQEGE 938 Query: 555 TGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLE 614 +L + G G N A+H+V +D +NP + Q R+ RIGQ ++++H + Sbjct: 939 GSPIFVLSLKAGGVGLNLTRANHVVHYDRWWNPAVENQATDRVFRIGQQKNVEVHKLICQ 998 Query: 615 KTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDD 665 T + + E +G + ++ + L ++ F + Sbjct: 999 GTLEERIDELIERKKTLSEQVVGSGEQWLTEMSDEELRNLIVLQESGLFPE 1049 >UniRef50_C6BED0 Helicase domain protein n=5 Tax=Proteobacteria RepID=C6BED0_RALP1 Length = 949 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 148/798 (18%), Positives = 282/798 (35%), Gaps = 74/798 (9%) Query: 55 FNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDR 114 F PG ++ S G + V + L + + + + L + L + P R Sbjct: 7 FQPG-SLVSARGREWIVLPQSSTDTLYLRPLGAAEDDATLIYLP-IELHPVGPATFPWPR 64 Query: 115 LFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVL 174 + Q L A + P+ +QL ++ R+L Sbjct: 65 IE--QASNFAAGQLLRDALQLKLRTGAGPFRSFGNIAVEPRAYQLVPLLMALKQDVVRLL 122 Query: 175 LADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF---D 231 +AD+VG+GKTIEA +I+ + L G R+ ++ P L QW E+ RF++ + Sbjct: 123 VADDVGIGKTIEAALIVRELLDRGEISRLAVLCPPHLCEQWQRELKERFHINAVVVRNTT 182 Query: 232 DERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA 291 R + F+ + SLD+ + ++R + A + ++VDEAH +S Sbjct: 183 ASRLERGLPANQSVFEAYPFTVVSLDYIKSDRRR-DEFQRACPECVIVDEAHTCTFSGQG 241 Query: 292 PSREYQAIEQLAEH-VPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR 350 + Y ++ LAE+ ++LLTATP ++ + L LL P F + + + Sbjct: 242 RQQRYTLLKGLAENPERHMVLLTATPHSGDEDAFYNLLGLLKPE-FCELKDL--PPDSRK 298 Query: 351 PVADAVAMLLAGNKLSNDE----LNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSM 406 P+ + +A + + E + E + + L + +D + +ELV Sbjct: 299 PLREQLANHFVQRRRPDIEEWQDRQVFPERLTTEITYKLTGEWGNLFDDVLAYARELVMR 358 Query: 407 LMDRHGTSRVL------------FRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIM 454 D+ + + + + V R L + Sbjct: 359 TEDQGLVQQRMSWWAALALLRCISSSPQAAVNALRTRLRGQTPAGLDEAAEAVTLEEADE 418 Query: 455 GARKSAEDRARDMLYPERIYQEFEGDNATW-------------WNFDPRVEWLMGYLTSH 501 R+ D D L + I +++ DP+++ L+ +L Sbjct: 419 QGRERVLDGTEDDLTTQDIEPAANTEDSALLLALVARAESLAGTGKDPKLKRLIDHLKEL 478 Query: 502 RSQKV--LVICAKAATALQLEQVLRE-REGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ 558 S + +V C ATA + + LR + + ER+ A E + + Sbjct: 479 TSDRFQPVVFCRYIATAHYVAEQLRLVFPDHQVTAVTGEFAPTEREAAVDAMGEAEQ--R 536 Query: 559 VLLCSEIGSEGRNFQFA-SHMVMFDLPFNPDLLEQRIGRLDRIGQA-HDIQIHVPYLEKT 616 +L+ ++ SEG N Q + +V +DL +NP EQR GR+DR GQ +++ + Y + Sbjct: 537 ILVATDCLSEGINLQNLFTAVVHYDLSWNPTRHEQREGRVDRFGQKAREVRTTLLYGQDN 596 Query: 617 -AQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS-------------PDQTEG 662 +++ ++ + D L L P Sbjct: 597 PVDGAVLQVILRKAESIRKELGVLVPMPDD-QGKLTQALVGAVLLRKGTSTAKMPQLGLD 655 Query: 663 FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNL 722 F + ++ + + + R + + +++ + ++ F Sbjct: 656 FGAPEEAIDTAWQSARDRAARNRTLFAQRRLKPEDVLPEWQKTMAVLGGEADVERFVKRA 715 Query: 723 FDIIGINQDDR---GDNMIVLTPSDHMLVPDFPGLSEDGITIT----FDREVALAREDAQ 775 +G + G N L + + L +G+ T F + A AQ Sbjct: 716 SVQLGAPLEPSTKGGANHWKLHAG-SLPMAVRERLEGEGLVGTLHIDFHQPPAPT---AQ 771 Query: 776 FITWEHPLIRNGLDLILS 793 FI HPL+ D +L Sbjct: 772 FIHRTHPLVSVLADYLLE 789 >UniRef50_D0NE95 Chromodomain protein, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NE95_PHYIN Length = 1748 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 98/533 (18%), Positives = 182/533 (34%), Gaps = 56/533 (10%) Query: 127 ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKT 184 A R + + S + + +L +QL + + R +LADE+GLGKT Sbjct: 704 ATYSDVRPEPNTWAKYLESPVYNNQNTLRSYQLEGLNWMTFCWYNRRNCILADEMGLGKT 763 Query: 185 IEAGMILHQQLLSG-AAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDE------RYAE 237 ++A IL L++ P W E+ ++ ++ D R Sbjct: 764 VQATSILEHLRQREFIRGPFLVVAPLATLGNWKREIETWTSMNCVVYHDSEGGSDIRAFI 823 Query: 238 AQHDAYNPFDTE--------QLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSE 289 + + + + +++ S + LE + W +V+DEAH L + Sbjct: 824 REQEFHFASEAHRKRGIYKFNVLVTSYQTLMMDAEFLESI---HWRYIVIDEAHKL---K 877 Query: 290 DAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY 349 + ++ Q + LL+T TP Q G+ + L ++P++F +F +E + Sbjct: 878 NREAKLLQVLHGFT--WDSCLLMTGTPLQNGVFELWCLLNFIEPDKFPSQQEFYDEFGDL 935 Query: 350 RPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMD 409 + +L L + E + E+ I P + + + +++ + + Sbjct: 936 NTAEQVAQL---HEQLRPYMLRRVKEDV-EKSIPPKEETIVDV--ELTTMQKKYYRAIFE 989 Query: 410 RHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY 469 R F N L +++ L + G+ D M Sbjct: 990 R----NRQFLNMGATGT---VANLVNVEMELRKCCNHPFLIRGVEDKECVGFDEQLRM-- 1040 Query: 470 PERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQVLRERE 527 + L LT R + KVL+ +E + + Sbjct: 1041 ------------KILIQASGKTVLLDKLLTKFRQENKKVLIFSQFKIMLDIIED-MCQLR 1087 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFN 586 G + R A F D+ LL + G G N AS +++FD +N Sbjct: 1088 GYSMERLDGSVRGNSRQAAIDRFNSPDSDTFAFLLSTRAGGVGINLIAASVVILFDSDWN 1147 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTG 639 P Q + R RIGQ + I+ +KT ++ + + L TG Sbjct: 1148 PQNDLQAVARCHRIGQTQSVNIYRLVTKKTYEAQMFEIASKKLGMHHAVFETG 1200 >UniRef50_Q8IJG6 Chromodomain-helicase-DNA-binding protein 1 homolog, putative n=2 Tax=Eukaryota RepID=Q8IJG6_PLAF7 Length = 3328 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 121/591 (20%), Positives = 217/591 (36%), Gaps = 85/591 (14%) Query: 154 LIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMIL-HQQLLSGAAERVLIIVPET 210 L +QL + + R VLLADE+GLGKT++ ++ H L+IVP++ Sbjct: 1296 LRAYQLTGLNWIVSRMKRNLSVLLADEMGLGKTVQTIAVVGHMLYKEKLIGPYLVIVPQS 1355 Query: 211 LQHQWLVEMLRRFN-LRFALFDD---ERYAEAQHDAYNPF-------DTEQLVICSLDFA 259 WL E + R H+ + + I + Sbjct: 1356 TVDNWLNEFKSWLPQANVVCYHGNAVSRELIRTHELKKVYVPNKGYRYKFDVCITT-PSI 1414 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 S +E L + W L+VVDEAH L ++ S+ + ++Q LLL+ TP Sbjct: 1415 LNSVSDVELLKKMPWQLMVVDEAHQL---KNRQSKRFIELKQFM--AESKLLLSGTPLHN 1469 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 +E + L L+P ++ + F QK Y + + +IGE Sbjct: 1470 NLEELWTLLHFLNPQQYTYYETF---QKKYNEIEN-------------------TSLIGE 1507 Query: 380 QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 + L+Q + EL +++ R + + ++ N V+ + EL I++ Sbjct: 1508 AKQKQLIQL-----------QHELHEVILRR--VKKDVEKSLPNKVERILRVELSPIQIE 1554 Query: 440 -----LPTQYQTAIKVSGIMGARKSAEDRARDM----LYPERIYQEFEGDN--ATWWNFD 488 L Y+ K SG GA+ S ++ ++ +P + + D Sbjct: 1555 YYKNILTKNYEQLAKASG--GAKNSLQNICMELKKVCNHPFLCAEPLDKDEYKERLVYSS 1612 Query: 489 PRVEWLMGYLT--SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRA 546 ++ L L R +VL+ L + L R G + M+ R +A Sbjct: 1613 GKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLR-GFKHQRLDGTMTKEMRKKA 1671 Query: 547 AAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD 605 F +++ V LL ++ G G N A ++++D +NP Q R RIGQ Sbjct: 1672 MNHFNSKNSDDFVFLLSTKAGGLGINLTSADTVIIYDSDWNPQNDLQAGARAHRIGQTKT 1731 Query: 606 IQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDD 665 +QI+ + + + ++ + + N + + + GF Sbjct: 1732 VQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKKQNDNVNYVGG--ETGGSSNGF-- 1787 Query: 666 LIKNCREQHEALKAQLEQGRDRLLEIHSNG--GEKAQALAESIEEQDDDTN 714 E L L+ G +L E +S+ +K +I+ D D + Sbjct: 1788 -------TREELSKILKFGAQKLWEKNSSKYSPQKLDEDKNAIKGVDVDLD 1831 >UniRef50_Q7QIL9 AGAP006945-PA n=3 Tax=Culicidae RepID=Q7QIL9_ANOGA Length = 871 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 106/551 (19%), Positives = 202/551 (36%), Gaps = 54/551 (9%) Query: 154 LIPHQLNIA---------HDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGA----- 199 L PHQ + +LADE+GLGKT++ +++ L +G Sbjct: 253 LRPHQREGVAFLYECVTGLRMLEPPGCGAILADEMGLGKTLQCIALMYTLLKTGPYGKPL 312 Query: 200 AERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFA 259 A+RVLI+ P +L W E+ + +F + Y ++I S + Sbjct: 313 AKRVLIVTPSSLVDNWDREITKWLR-SERIFTFIVGPNNKLKRYAQSPHIPILIISYEML 371 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 + LE + ++DL+ DE H L +++ + + + +L +LLT TP Q Sbjct: 372 AKQIGELETV---KFDLMFCDEGHRL---KNSNVKAFGVLNRL--ECRRRVLLTGTPIQN 423 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 ++ F+ + ++P + F + V+ +L +L + LN L + G Sbjct: 424 DLQEFFSLINFVNPGAIGTYQDFKARYETPIVVSQRPGVLPQSIELGIERLNELNAITGR 483 Query: 380 QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 + + N D + E+V +++ TR + F E Sbjct: 484 FVLRRTQEVINRYLPD----KHEVVVFCHPSALQTQL----TRTALS-FYDSEKGADNAV 534 Query: 440 LPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPR-------VE 492 P Q T +K + S + + PE + W P VE Sbjct: 535 SPLQLITILKKICNHPSLVSVQGKGD----PESLVHLLAEQLPPWQRMGPTDSAKLGIVE 590 Query: 493 WLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAE 552 L+ + + + +K++++ + T + L + + + +R R A F Sbjct: 591 ALLEAMLAMQ-EKIVIVSYYSKTLDMIGG-LCDHYNYKYCRLDGSTAGPDRSRIVAAFNN 648 Query: 553 EDTGAQVLL-CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVP 611 + +LL ++ G G N AS +V++D +NP Q + R+ R GQ + I+ Sbjct: 649 PANDSFILLLSAKAGGAGLNLIGASRLVLYDNDWNPANDLQAMSRVWRDGQRKPVFIYRL 708 Query: 612 YLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCR 671 + + + + T+ D +L N S ++ + +I Sbjct: 709 LTAYSIEERIFQRQISK-------TSLSGTVVDQ-RQNLSNLKLSEEELKDLFSIIDPNA 760 Query: 672 EQHEALKAQLE 682 E + LE Sbjct: 761 EADCLTHSLLE 771 >UniRef50_A7SAK4 Predicted protein n=2 Tax=Eumetazoa RepID=A7SAK4_NEMVE Length = 836 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 98/529 (18%), Positives = 182/529 (34%), Gaps = 38/529 (7%) Query: 154 LIPHQLNIAHDV------GRR-HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAE----- 201 L PHQ + + R + +LADE+GLGKT++ ++ G Sbjct: 225 LRPHQRDGVLFLYECVMGLRNFNGNGAILADEMGLGKTLQCIALIWTLHKQGPYGGQPVC 284 Query: 202 -RVLIIVPETLQHQWLVEMLRRF-NLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFA 259 R+LII P +L W E + N R +F + +P ++I S + Sbjct: 285 NRILIITPGSLVKNWCAEFRKWLGNERMRVFPVTSDMRVKEFIISPI--YPVLIISYEMF 342 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 RS+ + + ++DL + DEAH L +++ + I L +LLT TP Q Sbjct: 343 IRSQ---DDIMNIKFDLFICDEAHRL---KNSAIKTTTLISGL--KTRRRVLLTGTPIQN 394 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNY-----RPVADAVAMLLAGNKLSNDELNMLG 374 ++ + L +P F + +P A + LL + S ELN L Sbjct: 395 DLKEFHTLIELCNPGVLGTL--FRRVYEQPIVNGQQPGATSEDKLLGQTRAS--ELNRLT 450 Query: 375 EMIGEQDIEPLLQA-ANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKREL 433 + + + + E R + + + RH + R Sbjct: 451 RLFFLRRTSEINEKYLPPKVEMVVFCRPAHLQVTLYRHLLTSRFLRGCLRASCPSSTHLE 510 Query: 434 HTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEW 493 L + T + + ED+ +++ E + ++ Sbjct: 511 CIGALKKLCNHPTLLYSASQGANTLGDEDQVSLYDGLLKLFPECNDASELSIAQSGKLTV 570 Query: 494 LMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA 551 L L ++V+++ + T L Q L + R +R F Sbjct: 571 LNSMLEEIHCTGERVVLVSNYSQTLDIL-QKLCTVKKYRYLRLDGSTPTAKRQSLVERFN 629 Query: 552 EED-TGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610 + LL S+ G G N AS ++++D+ +NP Q + R+ R GQ + I+ Sbjct: 630 AKHCQDFVFLLSSKAGGVGLNLIGASRLILYDIDWNPANDLQAMARVWRDGQRRRVVIYR 689 Query: 611 PYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQ 659 T + + + + + + + L + D+ Sbjct: 690 LLTTGTIEEKIYQRQTTKQGLSGAVADDRKQVKVDFSQEDVKDLFTLDE 738 >UniRef50_A7HFJ5 Non-specific serine/threonine protein kinase n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HFJ5_ANADF Length = 1002 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 126/596 (21%), Positives = 217/596 (36%), Gaps = 66/596 (11%) Query: 110 KPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH 169 P+ + +R R A GL R L P+Q+ + R Sbjct: 275 PPEVARTGRRAIEAERLERRRHALDAEVRAAGAEPPGL---RMKLYPYQVEGVAFLASR- 330 Query: 170 APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNL-RFA 228 R LLADE+GLGKT +A + Q + G R LI+ P +L+HQW+ E+ + L Sbjct: 331 -GRALLADEMGLGKTAQAIAAMAQLVRRGDVRRTLIVCPTSLKHQWVRELRQFTTLEPVD 389 Query: 229 LFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 + EA+ Y + +++ S + AR ++ L L DLL++DEA + Sbjct: 390 IGVVAGAREARRAIYA--EARPVLVTSYELARADERELSDLAP---DLLILDEAQRI--- 441 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 ++ +R ++ L V LT TP + ++ ++ ++++DP F +F EE Sbjct: 442 KNWRTRTASVVKGLRSRFAFV--LTGTPLENRLDDLYSLMQVVDPRIFGPLWRFNEEF-- 497 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM 408 L+ G G ++++ L + ++E++S L Sbjct: 498 -------------------TTLDGSGRPAGYRNLDRLRARIAPVV--LRRRKEEVLSDLP 536 Query: 409 DRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDML 468 DR + + RE I + + E R Sbjct: 537 DRLVSRLTVAMT----------REQQEIHADAEESAGRLLAILRRRPLSPVEEQRLMRAF 586 Query: 469 YPERIYQEFEGDNATWWNFDPRVEWLMGY---LTSHRSQKVLVICAKAATALQLEQVLRE 525 R+ + G P+++ L + +KV+V + L E Sbjct: 587 QRMRMACDAAGLVDKKTRGAPKLDELERLLEEICLGDRRKVVVFSE-WERMQAMAAELCE 645 Query: 526 REGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPF 585 R G+ H G+ R F +D +V L ++ G G N Q ASH+V DLP+ Sbjct: 646 RLGVGHVRLHGGVPSAARGALIDRFR-DDPECRVFLSTDAGGVGLNLQAASHVVNLDLPW 704 Query: 586 NPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDS 645 NP +L QRI R+ R+GQ + + + E + + L F + Sbjct: 705 NPAVLAQRIARVHRLGQREAVNVVLLVSEGSFEERLEATLDGKRALFAAAVGDDHETVEL 764 Query: 646 VYNDLINYLASPDQTE------------GFDDLIKNCREQHEALKAQLEQGRDRLL 689 + + +A+ E D + RE+ Q+ + D L Sbjct: 765 ERSSMARRIATLLWGEFAATTGRGAAVAPSADPVAALRERVGGALEQVVRLADGRL 820 >UniRef50_A0C3B5 Chromosome undetermined scaffold_147, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0C3B5_PARTE Length = 1021 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 113/678 (16%), Positives = 248/678 (36%), Gaps = 60/678 (8%) Query: 69 MQVEEVKEENGLLTYIGTRLD----TEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMD 124 ++++++K E Y + T S L++ + KL + + Sbjct: 28 LRIDDLKREQEKFLYKLSCEKPVKVTSVSKQELKDQQVSDKLSILFDEVEEEMDNLISKA 87 Query: 125 RFALRYRARKYSSEQFRMPYSGLRGQRTSLIP-----HQLNIAHDV--GRRHAPRVLLAD 177 + ++Y +K E +P + L+ Q + L +QL + + + +LAD Sbjct: 88 KQYVQYINKKQGDENSSLPNTYLKTQPSILKKGKLTGYQLQGLNWLISMQEAGLNGILAD 147 Query: 178 EVGLGKTIEAGMILHQQL-LSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA 236 ++GLGKTI+ +L + LI+ P + W E+ + ++ Sbjct: 148 QMGLGKTIQTIALLGFMKQFKNVSGPHLIVGPLSTIPNWERELSEWL-PKCSVLKMMATE 206 Query: 237 EAQHDAYNPFDT--EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSR 294 E +HD +++ S + +++ L + ++ L++DEAH L ++ S Sbjct: 207 EWRHDFNKHLSKKDYDVIVASYECVINNERI---LNKYRFEYLIIDEAHKL---KNEESL 260 Query: 295 EYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVAD 354 + +++L+ LLLT TP Q ++ L L P F F + + +++ Sbjct: 261 FFTTLKRLSSRF--RLLLTGTPLQNNPHELWSLLNYLMPQLFTSSEAFDQWFYINKLMSE 318 Query: 355 AVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTS 414 + K + + + +I + D ++ + + + Sbjct: 319 KEILQEKYEKRNMNMIEKAKSIIQAFMLRRTKSEVALDI-----PPKKEIHLYVQMTPLQ 373 Query: 415 RVLFRNT---RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE 471 + +RN + V ++ L I + L Q ++PE Sbjct: 374 KSHYRNMILNKKVVGVTTQKSLMNILIQLRKICQHLY-------------------MFPE 414 Query: 472 RIYQEFEGDNATWWNFDPRVEWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGI 529 ++ +++ L +L + + KV++ + LE L R+ Sbjct: 415 LEDRDQPSLGEHLIENSGKLKVLDMFLKKLYNENHKVILFSQFTSLLDILEDYLNYRK-Y 473 Query: 530 RAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPD 588 + I RD F D+ + LL + G G A ++++D FNP Sbjct: 474 KYCRLDGSTPIEVRDENIRNFQNPDSDLFIFLLSTRAGGLGITLTAADTVIIYDSDFNPQ 533 Query: 589 LLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYN 648 L +Q + R RIGQ ++ ++ + T + ++ L + G + + N Sbjct: 534 LDQQAMDRAHRIGQKKNVMVYRLICQSTVEEKIIERQQIKLRWEQMIIDKGHSQMVGMMN 593 Query: 649 DLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEE 708 T G ++K+ E ++ L++G + +++ ++ + I++ Sbjct: 594 K--KEDLKSIATYGASQILKDEPYTEEDIETLLKRGEELTEQLN----QQIDQKFKIIKD 647 Query: 709 QDDDTNLIAFAMNLFDII 726 + D L ++ +FD Sbjct: 648 KIDKVELGVKSIRVFDFF 665 >UniRef50_B7G2T7 Imitation switch isoform 1, alias nucleosome remodeling factor 140 kDa subunit n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G2T7_PHATR Length = 1023 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 102/579 (17%), Positives = 192/579 (33%), Gaps = 76/579 (13%) Query: 153 SLIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPE 209 + P+QL + + + H +LADE+GLGKT++ +L G ++IVP+ Sbjct: 148 RMHPYQLEGLNWLIKLHDHGINGILADEMGLGKTLQTISLLAYLRESRGVRGAHMVIVPK 207 Query: 210 TLQHQWLVEMLRRF-NLRFALFDDERYAEAQH-------DAYNPFDTEQLVICSLDFARR 261 ++ W+ E + +++ + + D +++ S + R Sbjct: 208 SVVGNWIREFKKWCPSIKAIRMGGTKDERQKFVTEDLPLDPNTGKRKFDVLVTSYEGLLR 267 Query: 262 SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGM 321 K +L + W +++DEAH + + S+ + ++ LL+T TP Q + Sbjct: 268 EKGKLSRI---PWKYVIIDEAHRIKNENSSLSKVVRTMK-----TEFRLLITGTPLQNNL 319 Query: 322 ESHFARLRLLDPNRFHDFAQFVEEQK-----NYRPVADAVAMLLAGNKLSNDELNMLGEM 376 +A L L P+ F D QF E V + +L L + ++ + Sbjct: 320 RELWALLNFLMPDIFGDAEQFDEWFSLTDASGKENVIKKLHTILRPFMLRRVKKDVATSL 379 Query: 377 IGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTI 436 +++ + + E Q+ L N + G + L + Sbjct: 380 PPKKETKLYIGLTKMQQEWYVRCLQKDAHEL---------------NKLGGPDRNRLLNV 424 Query: 437 KLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMG 496 + L G D W +++ + Sbjct: 425 LMQLRKVCNHPYLFDGAEQGPPYI-------------------DGPHLWENSGKMQLMHK 465 Query: 497 YLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA-EE 553 L + +VL+ C LE R + + RD F E Sbjct: 466 LLPKLQAKGSRVLIFCQMTRVLDILEDYFRLTK-LEYCRIDGNTDGERRDSQMDEFNAEG 524 Query: 554 DTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYL 613 + LL + G G N A ++++D +NP + Q + R RIGQ +Q+ Sbjct: 525 SSKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRIGQTKPVQVFRFVT 584 Query: 614 EKTAQSVLVRWYHEGLDAFEHTCPTGR-----------TIYDSVY---NDLINYLASPDQ 659 E T + ++ L GR + V + +++ Sbjct: 585 EGTVEEKIIERADRKLFLDAAVIQQGRLAEQHSSLEKGDLMKMVRFGADQILSGTGGTYT 644 Query: 660 TEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEK 698 E D LI E+ ++A+L+ L S E Sbjct: 645 DEDIDALIARGEERTTEMQAKLQTDAQHNLANFSLMAED 683 >UniRef50_B3L200 SNF2-family protein, putative n=8 Tax=Eukaryota RepID=B3L200_PLAKH Length = 3207 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 121/591 (20%), Positives = 215/591 (36%), Gaps = 85/591 (14%) Query: 154 LIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMIL-HQQLLSGAAERVLIIVPET 210 L +QL + + R VLLADE+GLGKT++ ++ H L+IVP++ Sbjct: 1391 LRAYQLTGLNWMVSRMKRNLSVLLADEMGLGKTVQTIAVVGHMLYKEKLIGPYLVIVPQS 1450 Query: 211 LQHQWLVEMLRRFN-LRFALFDD---ERYAEAQHDAYNPF-------DTEQLVICSLDFA 259 WL E + R H+ + + I + Sbjct: 1451 TVDNWLNEFKSWLPQANVVCYHGNAVSRELIRTHELKKVYVANKGFRYKFDVCITT-PSI 1509 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 S +E L + W L+VVDEAH L ++ S+ + ++Q LLL+ TP Sbjct: 1510 LNSLSDVELLKKMPWQLMVVDEAHQL---KNRQSKRFIELKQFM--AESKLLLSGTPLHN 1564 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 +E + L L+P ++ + F QK Y + + +IGE Sbjct: 1565 NLEELWTLLHFLNPQQYTHYENF---QKKYNEIEN-------------------TSLIGE 1602 Query: 380 QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 + L+Q + EL +++ R + + ++ N V+ + EL I++ Sbjct: 1603 AKQKQLMQL-----------QHELHEVILRR--VKKDVEKSLPNKVERILRVELSPIQIE 1649 Query: 440 L-----PTQYQTAIKVSGIMGARKSAEDRARDM----LYPERIYQEFEGDN--ATWWNFD 488 Y+ K SG GA+ S ++ ++ +P + + D Sbjct: 1650 FYKNILTKNYEQLAKASG--GAKNSLQNICMELKKVCNHPFLCCEPVDKDEYKERLVYSS 1707 Query: 489 PRVEWLMGYLT--SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRA 546 ++ L L R +VL+ L + L R G + MS R +A Sbjct: 1708 GKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLR-GFKHQRLDGTMSKEMRKKA 1766 Query: 547 AAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD 605 F +++ V LL ++ G G N A ++++D +NP Q R RIGQ Sbjct: 1767 MNHFNSKNSDDFVFLLSTKAGGLGINLTSADTVIIYDSDWNPQNDLQAGARAHRIGQTKT 1826 Query: 606 IQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDD 665 +QI+ + + + ++ + + N + + + GF Sbjct: 1827 VQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKKQNDNVNYIGG--EGGNTSNGF-- 1882 Query: 666 LIKNCREQHEALKAQLEQGRDRLLEIHSNG--GEKAQALAESIEEQDDDTN 714 E L L+ G +L E +S+ +K I+ D D + Sbjct: 1883 -------TREELSKILKFGAQKLWEKNSSKYSPQKMDEEKAVIKGVDVDLD 1926 >UniRef50_A2FI37 SNF2 family N-terminal domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2FI37_TRIVA Length = 1612 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 106/594 (17%), Positives = 204/594 (34%), Gaps = 57/594 (9%) Query: 153 SLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQ-LLSGAAERVLIIVPE 209 L +Q++ + + + +LADE+GLGKT++ M L + ++ L+I P Sbjct: 235 ELRDYQIDGVNWLLYCYYEHRNSILADEMGLGKTVQIVMTLKKISEITKINGPFLVISPL 294 Query: 210 TLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDT--------EQLVICSLDFARR 261 + QW E + +L +F + + + ++I + + Sbjct: 295 STLQQWRREFEKWSDLNTVVFHGKPASREVILNFEFTTDDESENKVGFDVLITNYETFTS 354 Query: 262 SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGM 321 E EW LV+DE H L ++ + YQ + QL LLT TP Q + Sbjct: 355 E---FESFKPIEWRYLVLDEGHRL---KNHTGKCYQLLTQLT--FEHCTLLTGTPIQNNV 406 Query: 322 ESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQD 381 E ++ L LL P F D +F+E+ + D++N L + Sbjct: 407 EELWSLLHLLHPKEFEDLPEFLEQFGHI------------------DDINTLQALQELIQ 448 Query: 382 IEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLP 441 L + N + ++ + + R + + + +++ LP Sbjct: 449 PYILRRRKNDVEATLTKLEETIIEVELTR--IQKQYYTTLLHENASVLMQQITGGSLPSL 506 Query: 442 TQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ--EFEGDNATWWNFDPRVEWLMGYLT 499 ++ + + E++ Q E E ++ L L Sbjct: 507 QNLMMQLRKVCNHPYLIKGASEFIEKMIREKLSQASEDEIQLQALIESSGKMILLDKLLP 566 Query: 500 SHRSQ--KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGA 557 + KVL+ +E L +++ I + ER+ A F + Sbjct: 567 KLHQEGHKVLIFSQMVKVLDIIEDYLIKKD-IDCERIDGNVPEPERNAAIDRFVNNENCY 625 Query: 558 QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTA 617 LLC+ G G N A ++++D +NP Q R RIGQ ++++ T Sbjct: 626 IFLLCTRAGGVGINLTAADTVIIYDSDWNPQNDIQAQSRCHRIGQTQKVKVYRLVTRGTY 685 Query: 618 QSVLVRWYHEGLDAFEHTC-----PTGRTIYDSVYNDLINYLA---SPDQTEGFDDLIKN 669 + ++ + L + + L+ + A + D D + Sbjct: 686 ELEMLDRASKKLGLDHALLDGGEIGKSDPVQATEIEKLLRHGAYNITHDDDSETDKFVAA 745 Query: 670 CREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLF 723 +Q + E+ D + SN + + Q+D+ N F N+ Sbjct: 746 DIDQILGSRTT-ERTHD----LSSNSFFSKKQFFSENKSQEDEINAADFWQNIL 794 >UniRef50_UPI000180C4B7 PREDICTED: similar to helicase, lymphoid-specific n=1 Tax=Ciona intestinalis RepID=UPI000180C4B7 Length = 936 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 99/562 (17%), Positives = 196/562 (34%), Gaps = 53/562 (9%) Query: 154 LIPHQLNIAHD--VGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 L P+Q+ V +A +LADE+GLGKTI+ ++ + + SG L+ P + Sbjct: 348 LRPYQITGFEWLKVLFDNAVNGILADEMGLGKTIQCIAMICRLVKSGFTGPFLVCAPLST 407 Query: 212 QHQWLVEMLRRFNLRFALF-----DDERYAEAQHDAYNPFD--TEQLVICSLDFARRSKQ 264 W+ E +RF R + ER A ++ D +V+ S + R + Sbjct: 408 ICNWINEF-KRFAPRIPVLLYHGSAAERCILASTISHLSPDLGCHPVVVTSYEVLIRDR- 465 Query: 265 RLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESH 324 L + W+ L+VDE H + ++ R + ++ L + LLLT TP Q + Sbjct: 466 --PTLGKHSWEYLIVDEGHRI---KNMNCRLIRELKALKVNAK--LLLTGTPLQNNLSEL 518 Query: 325 FARLRLLDPNRFHDFAQFVE-----------EQKNYRPVADAVAMLLAGNKLSNDELNML 373 ++ L L P F+D + F E + + V + +L L + ++ Sbjct: 519 WSLLNFLLPEVFNDLSTFEAWFDLKKIQKGIESQQQQDVVIKLQKILVPFLLRRTKSDIQ 578 Query: 374 GEMIGEQDI-------------------EPLLQAANSDSEDAQSARQELVSMLMDRHGTS 414 + ++++ + Q + D + + L + D + + Sbjct: 579 IYLPPKKELIVFAPLSESQNEIYQAIVNRTIRQYLHEDKDKDEQNELALERISNDSNQSD 638 Query: 415 RVLF-RNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERI 473 + + R TR+ + + ++ + + +S +M + + + YP Sbjct: 639 QGFYERETRSSTLATRQGKEREDRMTYDDESVVNVSLSNLMMQLRKCCNHPYLIKYPLIP 698 Query: 474 YQEFEGDNATWWNFDPRVEWLMGYLT--SHRSQKVLVICAKAATALQLEQVLREREGIRA 531 + + + +++ L L + K+L+ + LE R Sbjct: 699 GTDIFRVDEELISSSGKLQLLDRMLPVLKKKGHKILLFSQMTSLLDILEDFCNFR-NHSY 757 Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLE 591 R + + LL + G G N A +V++D +NP Sbjct: 758 VRLDGSTKCEVRQERIDEYNRDPDLFIFLLSTRAGGLGINLTSADTVVIYDSDWNPQNDL 817 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI 651 Q R RIGQ + I+ T +V E + DL Sbjct: 818 QAQDRCHRIGQTRSVLIYRFVSSNTVDQFMVERAEAK-RVLERMIINRNKFKGKLAEDLN 876 Query: 652 NYLASPDQTEGFDDLIKNCREQ 673 + + + L++ + + Sbjct: 877 SKEGTSSVSTQLLSLLQQNKSE 898 >UniRef50_A2DYG3 F/Y-rich N-terminus family protein n=1 Tax=Trichomonas vaginalis RepID=A2DYG3_TRIVA Length = 1587 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 102/543 (18%), Positives = 186/543 (34%), Gaps = 58/543 (10%) Query: 150 QRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQ-QLLSGAAERVLII 206 L +QL + + R +LADE+GLGKT++A L+ G LII Sbjct: 225 SGLELFSYQLAGMNWLRHRWYNNTNCILADEMGLGKTVQAISFLNYAHTHEGLQTPFLII 284 Query: 207 VPETLQHQWLVEMLRRFNLRFALFDDERYAE--AQHDAYNPFD----TEQLVICSLDFAR 260 P + WL E L ++ + A + +N D ++I + + Sbjct: 285 APLVTLYNWLREFNTWTKLNVVIYTGPKEARNTIREHEFNYEDGTGPKFDVLITNYELII 344 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG 320 E + W L+VDEA L ++ S+ + A+ + H +LLT TP Q Sbjct: 345 NDT---EVFSQFNWSFLIVDEAQRL---KNQNSKLFSALANV--HSDHRILLTGTPIQNT 396 Query: 321 MESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 +E + L L P F D A+ + + ++ Sbjct: 397 LEELVSLLEFLHPGEFQDLTA-----------AETAEDVFE---------------LRKK 430 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELH--TIKL 438 LL+ SD + +A++E + + ++++ F + H I + Sbjct: 431 LEPHLLRRLKSDVDKTIAAKKETIIEC-GMTKFQKQIYKDILESNARFLTKGAHCSNIAM 489 Query: 439 PLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYL 498 L V G + +D P + Q + D + L Sbjct: 490 ELRKVCIHPYLVKGAE--ERILQDFPGANQNPSILLQAMIRASGKMILIDKLLPKLKS-- 545 Query: 499 TSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ 558 ++L+ LE L + G ++ + +R F E ++ Sbjct: 546 ---DGHRILIFSQMTNLLDILEDYLAMK-GYQSCRIDGKVKGEKRQGIIDKFNEPNSELF 601 Query: 559 V-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTA 617 V LL + G G N A +++FD +NP Q R RIGQ +Q++ + T Sbjct: 602 VCLLSTRAGGIGINLNSADTVIIFDSDWNPQNDLQAQARCHRIGQTKTVQVYRLLTKGTY 661 Query: 618 QSVLVRWYHEGLDAFEHTC--PTGRTIYDSVYNDLINYLASPDQTEGFDDL-IKNCREQH 674 + + L D + +L + + + FD+ I++ + Sbjct: 662 EQTMFDSASRKLGLGHAILDKMPPNKEIDMLLRKGAYHLLNDVEEDNFDEQDIEDILSKS 721 Query: 675 EAL 677 + + Sbjct: 722 KVM 724 >UniRef50_C7MQ57 DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MQ57_SACVD Length = 960 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 156/811 (19%), Positives = 296/811 (36%), Gaps = 91/811 (11%) Query: 157 HQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWL 216 +QL A+ PR+L+ D VGLGKT+E G++L + + G +R+L++ P + Q+ Sbjct: 138 YQLRPAYQALSNLRPRILIGDAVGLGKTLEIGILLTELIKRGRGDRILVVTPRAVLEQFQ 197 Query: 217 VEMLRRFNLRFALFDDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAE 273 EM R+++ D + + + NPF + VI S+D + + HL Sbjct: 198 REMWTRYSIPLVRLDSDGIQKVRQTLPATRNPFSYYKRVIVSIDTLKNPARYRHHLSGHR 257 Query: 274 WDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDP 333 WD++V+DE H+L+ + ++ + LA ++L +ATP ES + LLDP Sbjct: 258 WDVVVIDECHNLI---NKGTQNNELARLLARQTDALILASATPHNGKRESFAELIGLLDP 314 Query: 334 NRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS 393 D + +D + + ++ S D +G + ++ + Sbjct: 315 AAIADPKDY--------QASDIEHLYVRRHRNSPDVKLEVGHRWAPRRDPEIIPVEPTPE 366 Query: 394 EDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGI 453 E Q+ +EL + + + G FP L L P + +I+ Sbjct: 367 E--QAVLEELTYAWLRPASGQAPV---SGRGKTLFPW-TLFKAFLSSPRALRESIRRR-- 418 Query: 454 MGARKSAEDRARDMLYPERIYQEFE-GDNATWWNFDPRVEWLMGY-LTSHRSQKVLVICA 511 + + +D + ++ R+ E + FD ++ L + +V+V Sbjct: 419 LKTLSTQDDGSAEVEALRRLDGLAEVAERRGAAKFDALLKHLADIGVGKGSDTRVVVFSE 478 Query: 512 KAATALQLEQVLREREGIR---AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSE 568 + T L LR + + + H ++ + + FA E + ++LL S++ SE Sbjct: 479 RIQTLEWLRDELRRKLRLPDKAVQLLHAQLNDRDVQQVVEDFALEASPLRILLASDMASE 538 Query: 569 GRNFQF-ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS-----VLV 622 G N +V +DLP++ ++QR GR+DR Q H+ +I L + +V Sbjct: 539 GLNLHRQCHQLVHYDLPWSFIRIQQRNGRIDRYLQEHEPRITALALTSSDTDTVSDLRVV 598 Query: 623 RWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE 682 E A + D DL + + +L++ ++ + Sbjct: 599 TKLLEKEHAANQALGDAGALLDVRDADL--------EEDRIMELLRQGKDLATEINDP-- 648 Query: 683 QGRDRLLEIHSNGGEKAQ--ALAESIEEQ---DDDTNLIAFAMNLFDIIG---INQDDRG 734 + + + + GGE A + + DDD L + D G I++D+ Sbjct: 649 EEVNPFAALIATGGEHADDPPVPTAPRSTLFDDDDNFLTEALHEITDNPGALDIHRDEDT 708 Query: 735 DNMIVLTPSDHMLVPDFPGLSE---------DGITITFDREVALAR------------ED 773 D + TP+D L L + I ++ R + R D Sbjct: 709 DLLAFNTPAD--LAERLKDLPDSYLRDREVSSRIRVSAQRRFSEQRLAKARVEGKTLWPD 766 Query: 774 AQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAP--KQLQ 831 ++ HP++ L+ G + ++ +P L + + P + Sbjct: 767 VSYLAPSHPVLEWATSRALA-RFGRNQAPVMAAP-VPEPVFLTQATWANSLGQPVLTRWG 824 Query: 832 LNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLG 891 LP P +L +E + +Q V A ++ Sbjct: 825 AITGLPDEP-------KVGDLREALERAGLKEHARN-PGGVAG-WIERLQSFVPAAVEA- 874 Query: 892 EAQIEKSARALIDAARNEADEKLSAELSRLE 922 + R D + E+L RL Sbjct: 875 ---ATEDLRRHRDEVEGDLLERLDEHRKRLS 902 >UniRef50_Q9XFH4 SWI2/SNF2-like protein n=22 Tax=Embryophyta RepID=Q9XFH4_ARATH Length = 764 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 97/557 (17%), Positives = 197/557 (35%), Gaps = 49/557 (8%) Query: 153 SLIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPET 210 L +QL + ++ +LAD++GLGKTI+ L +G L+I P + Sbjct: 201 QLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGNGLDGPYLVIAPLS 260 Query: 211 LQHQWLVEMLRRF-NLRFALFDDERYAE----AQHDAYNPFDTEQLVICSLDFARRSKQR 265 W E+ R ++ ++ ++ +H +VI S + A +R Sbjct: 261 TLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKR 320 Query: 266 LEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHF 325 + L W +V+DE H L ++ + + ++ L + LLLT TP Q + + Sbjct: 321 I--LRHYPWKYVVIDEGHRL---KNHKCKLLRELKHL--KMDNKLLLTGTPLQNNLSELW 373 Query: 326 ARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPL 385 + L + P+ F +F E ++ A K ++ L ++ + Sbjct: 374 SLLNFILPDIFTSHDEF-ESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPF----I 428 Query: 386 LQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQ 445 L+ D E + ++E++ ++ + K F + L L Sbjct: 429 LRRMKCDVELSLPRKKEII------------MYATMTDHQKKF-QEHLVNNTLEAHLGEN 475 Query: 446 TAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATW-----WNFDPRVEWLMGYLTS 500 ++ +P+ + + +G + L L Sbjct: 476 AIRGQGWKGKLNNLVIQLRKNCNHPDLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLLVR 535 Query: 501 H--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ 558 + KVL+ L + +G + + ER R F++E + Sbjct: 536 LFANNHKVLIFSQ-WTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCS 594 Query: 559 V-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTA 617 + LL + G G N A +++D +NP + Q + R RIGQ + ++ ++ Sbjct: 595 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSI 654 Query: 618 QSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEAL 677 ++ +++ + L G+ + ++P + E L+K + L Sbjct: 655 ETRVLKRAYSKLKLEHVVIGQGQFHQER------AKSSTPLEEEDILALLKEDETAEDKL 708 Query: 678 KAQL--EQGRDRLLEIH 692 + DRLL+ Sbjct: 709 IQTDISDADLDRLLDRS 725 >UniRef50_Q7RM86 Chromodomain-helicase-DNA-binding protein, CHD-1-related n=4 Tax=Plasmodium (Vinckeia) RepID=Q7RM86_PLAYO Length = 2541 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 120/601 (19%), Positives = 219/601 (36%), Gaps = 90/601 (14%) Query: 140 FRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMIL-HQQLL 196 + S L G++ L +QL + + R VLLADE+GLGKT++ ++ H Sbjct: 906 YNETPSYLHGKK--LRAYQLTGLNWMVSRMKRNLSVLLADEMGLGKTVQTIAVVGHMLYK 963 Query: 197 SGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFD-------- 247 L++VP++ WL E + + Y Sbjct: 964 EKLIGPYLVLVPQSTVDNWLNEFKNWLPQANVVCYHGNAVSRELIRTYELKKVYVQNRGY 1023 Query: 248 --TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEH 305 + I + S +E L W L+VVDEAH L ++ S+ + ++Q Sbjct: 1024 RYKFDVCITT-PSILNSVSDVELLKRIPWQLMVVDEAHQL---KNRQSKRFIELKQFM-- 1077 Query: 306 VPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKL 365 LLL+ TP +E + L L+P ++ + F QK Y + + Sbjct: 1078 AESKLLLSGTPLHNNLEELWTLLHFLNPQQYTYYEAF---QKKYNEIEN----------- 1123 Query: 366 SNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGV 425 +IGE + L+Q + EL +++ R + + ++ N V Sbjct: 1124 --------TSLIGEAKQKQLMQL-----------QHELHEVILRR--VKKDVEKSLPNKV 1162 Query: 426 KGFPKRELHTIKLP-----LPTQYQTAIKVSGIMGARKSAEDRARDM----LYPERIYQE 476 + + EL I++ L Y+ K SG GA+ S ++ ++ +P + Sbjct: 1163 ERILRVELSPIQIEYYKNILTKNYEQLAKASG--GAKNSLQNICMELKKVCNHPFLCCEP 1220 Query: 477 FEGDN--ATWWNFDPRVEWLMGYLT--SHRSQKVLVICAKAATALQLEQVLREREGIRAA 532 + D ++ L L R +VL+ L + L R G + Sbjct: 1221 IDKDEYRERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLR-GFKHQ 1279 Query: 533 VFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLE 591 M+ R +A F +++ V LL ++ G G N A ++++D +NP Sbjct: 1280 RLDGTMTKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLTSADTVIIYDSDWNPQNDL 1339 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI 651 Q R RIGQ +QI+ + + + ++ + + N + Sbjct: 1340 QAGARAHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKKQNDNVNFIG 1399 Query: 652 NYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSN-----GGEKAQALAESI 706 + + GF E L L+ G +L E +S+ GE + + + + Sbjct: 1400 G--EGSNSSNGF---------TREELSKILKFGSQKLWEKNSSKYSPQDGEDGKNIIKGV 1448 Query: 707 E 707 + Sbjct: 1449 D 1449 >UniRef50_UPI00017928F7 PREDICTED: similar to DNA repair and recombination protein RAD54B (RAD54 homolog B) n=1 Tax=Acyrthosiphon pisum RepID=UPI00017928F7 Length = 840 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 89/487 (18%), Positives = 179/487 (36%), Gaps = 30/487 (6%) Query: 154 LIPHQ-------LNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGA------A 200 L PHQ + +LADE+GLGKT++ ++ L G A Sbjct: 252 LRPHQKTGIIFLYECVSGFKAQECFGAILADEMGLGKTLQTICLVWMLLKRGPYGGIPLA 311 Query: 201 ERVLIIVPETLQHQWLVEMLRRFNL-RFALFDDERYAEAQHDAYNPFDTEQLVICSLDFA 259 +RVLI+ P +L W E R R LF ++ + A P + ++I S + Sbjct: 312 KRVLIVAPSSLVGNWENEFTRWLGRDRLRLFSVDQKKKPSEFARLPARSYPVMITSYEML 371 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 R +E + + +DL+V DE H L ++ + Y A+ ++ +LLT TP Q Sbjct: 372 VR---YIEEIEKLHFDLMVCDEGHRL---KNNSTNTYLALTKI--ECKRRVLLTGTPIQN 423 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 + +A + ++P ++ F E ++ + L + + L E+ + Sbjct: 424 ELAEFYALIDFVNPGILGTYSMFKREFEDKIVESQQPECHPQIISLGKRKASELNEVTEK 483 Query: 380 QDIEPLLQAANS--DSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIK 437 + N S+ + + + + + N I Sbjct: 484 FILRRTQDVNNKYLPSKYESVVFCAMAPIQCRLYEETVSYWENRVQEFGLSTISHFSVIT 543 Query: 438 LPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGY 497 + + ++ + + E + + + + D L+ Sbjct: 544 MLKKVCNHPELILNNRNNSDTTEETLNQHLNRTITLKHSLIESSGKLIVVDN----LLKE 599 Query: 498 LTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGA 557 L + S+K ++I T + L + + + + +R F ++ Sbjct: 600 LHKNGSEKTVLISYYTQTL-DIFVKLCDMKHYKYLRLDGSTATAQRTDIVKKFNNSNSNY 658 Query: 558 QVLL-CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKT 616 VLL ++ G G N AS+++++D +NP +Q + R+ R GQ ++ I+ T Sbjct: 659 SVLLLSAKAGGVGLNLVGASNLILYDSDWNPASDQQAMARIWRDGQKKNVHIYRLLTSGT 718 Query: 617 AQSVLVR 623 + + + Sbjct: 719 IEEKIFQ 725 >UniRef50_B9HP20 Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HP20_POPTR Length = 1748 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 128/696 (18%), Positives = 252/696 (36%), Gaps = 64/696 (9%) Query: 51 TRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSK-LVFS 109 TR D +M ++ +K+ + + I R+ + SG + E + + L ++ Sbjct: 505 TREEIEVNDV-----SKEMDLDLIKQNSQVERIIADRITKDSSGNVVPEYIVKWRGLSYA 559 Query: 110 KP---QDRLFAGQIDRMDRFALRYRARKYSSE----QFRMPYSGLRGQRTS--------L 154 + +D A D +D + R A + Q + + LR L Sbjct: 560 EATWEKDVDIAFAQDAIDEYKAREAAIAVQGKMVDLQRKKGKASLRKLDEQPEWLRGGKL 619 Query: 155 IPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPETL 211 +QL + + R+ V+LADE+GLGKT+++ +L + L++VP + Sbjct: 620 RDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQISGPFLVVVPLST 679 Query: 212 QHQWLVEMLRRF-NLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLC 270 W E + ++ ++ R + + F ++ + + + K L Sbjct: 680 LSNWAKEFRKWLPDMNVIVYVGTRASRERVGQPIKFSA---LLTTYEVVLKDKAV---LS 733 Query: 271 EAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRL 330 + +W+ L+VDEAH L +++ ++ Y + + + LL+T TP Q +E +A L Sbjct: 734 KIKWNYLMVDEAHRL---KNSEAQLYTTLLEFS--TKNKLLITGTPLQNSVEELWALLHF 788 Query: 331 LDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAAN 390 LDP++F FV KN + L + ++ ++ E+ + P ++ Sbjct: 789 LDPDKFRSKDDFVHNYKNLSSFNENELANLHMELRPHILRRVIKDV--EKSLPPKIERIL 846 Query: 391 SDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV 450 + +++ +++R+ F + GV+G + L I + L Sbjct: 847 RV--EMSPLQKQYYKWILERN------FHDLNKGVRG-NQVSLLNIVVELKKCCNHPFLF 897 Query: 451 SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVIC 510 + D ERI + D + L +VL+ Sbjct: 898 ESA-DHGYGGDISTNDSSKLERII----LSSGKLVILDKLLVRLHET-----KHRVLIFS 947 Query: 511 AKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEG 569 + Q + R G + R +A F + LL + G G Sbjct: 948 QMVRMLDIIAQYMSLR-GFQFQRLDGSTKAELRQQAMEHFNAPGSDDFCFLLSTRAGGLG 1006 Query: 570 RNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGL 629 N A +++FD +NP Q + R RIGQ + I+ K+ + ++ + + Sbjct: 1007 INLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKM 1066 Query: 630 DAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLL 689 +H + + D+ E L E + + E+ + RLL Sbjct: 1067 -VLDHLVIQKLNAEGRLEKKETKKGSYFDKNELSAILRFGAEELFKEDRND-EESKKRLL 1124 Query: 690 EIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDI 725 S ++ AE +EE++ + F Sbjct: 1125 ---SMDIDEILERAEKVEEKEAGGEQGNELLGAFKA 1157 >UniRef50_C4LZC7 Chromodomain-helicase-DNA-binding protein, putative n=2 Tax=Entamoeba RepID=C4LZC7_ENTHI Length = 1641 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 91/514 (17%), Positives = 173/514 (33%), Gaps = 48/514 (9%) Query: 154 LIPHQLNIAHDVGRR--HAPRVLLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPET 210 L +Q+ + + +LADE+GLGKT++ L++ P + Sbjct: 649 LRSYQMEGLNWLVFNWCRGKGCILADEMGLGKTVQVVAFFEHLRSFQKLPGPFLVVTPLS 708 Query: 211 LQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD------------TEQLVICSLDF 258 W E+ ++ ++ + Y F +I + + Sbjct: 709 TLEHWRREINEWTDMNVVVYLGTKENRQLIQHYEWFYLNKDEKEISKQIKFHALITTYEM 768 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 E L + W + VVDEA L ++ S+ + + ++ + +LLT TP Q Sbjct: 769 IMSD---YEILSQIHWQVTVVDEAQRL---KNKSSKLNKTLTEIPSY--HKILLTGTPIQ 820 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIG 378 ++ + L ++P F F E+ + + AD V L ++ L + + Sbjct: 821 NNIDELWTLLNFINPENFPSLENFHEKFGDAKT-ADGVKAL--QTEIQPYLLRRVKGNV- 876 Query: 379 EQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKL 438 E+ I P + + +++ L D+ F N G G L + + Sbjct: 877 EKSIPPKEEILIEV--ELTLVQKKYYRALYDK----NREFLN--KGCVGSNVPHLQNLMI 928 Query: 439 PLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYL 498 L + G+ + D PE QE + D + L Sbjct: 929 QLRKVCNHPFLIPGVEEKEIANPDD------PESYAQELIKSSGKMVLLDKLLPKL---- 978 Query: 499 TSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ 558 + KVL+ LE+ L ++ + +R A F + + Sbjct: 979 -NADGHKVLIFSQLKGVLDILEKYLSYKK-YTYERLDGSVRSNDRQNAIDRFMKGE-RFV 1035 Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ 618 LLC+ G G N A ++++D +NP Q R RIGQ +++++ + T + Sbjct: 1036 FLLCTRAGGIGINLSEADTVIIYDSDWNPQNDLQAQARCHRIGQKKEVKVYRLVSKNTYE 1095 Query: 619 SVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLIN 652 + L + V + Sbjct: 1096 RYMFERASMKLGLDQAILSNINNTPGEVNKESEK 1129 >UniRef50_B6JZ54 ISWI chromatin-remodeling complex ATPase ISW2 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JZ54_SCHJY Length = 913 Score = 306 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 93/536 (17%), Positives = 189/536 (35%), Gaps = 30/536 (5%) Query: 140 FRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLLS 197 FR L L +Q+ + + + ++ +LADE+GLGKT + L Sbjct: 379 FREEQPELLAPNIILKRYQVIGVNWLNLMYQEKLSGILADEMGLGKTCQVIAFLALLKEQ 438 Query: 198 GAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSL 256 G LI+VP + WL E + +L + + + Y +++ + Sbjct: 439 GIHGPHLIVVPASTVDNWLREFQKFSPSLHVEQYGGSQAERMEKRYYLVETQYDVLVTTY 498 Query: 257 DFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATP 316 A SKQ L ++++ V DE H+L ++ S Y+ + + LL+T TP Sbjct: 499 QLASSSKQDRSFLRHQKFNVCVFDEGHYL---KNRLSERYKQLMSIPAIF--RLLITGTP 553 Query: 317 EQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA--VAMLLAGNKLSNDELNMLG 374 Q + + L + PN F + Q ++ +P ADA +++ ++S + M Sbjct: 554 LQNNLNELMSLLAFILPNVFDNNMQGLDLIYKIKPAADASLERAVMSQERISRAKTMMNP 613 Query: 375 EMIGEQDIEPLLQAANS----DSEDAQSARQELVSMLMDR-----HGTSRVLFRNTRNGV 425 ++ + + + + + S ++++ ++D +L + + Sbjct: 614 FVLRRRKADVFSELPEKSRFVEKCEMVSTQKKVYQAILDSRNNPESSRDNILMQLRKAAN 673 Query: 426 KGFPKR--------ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEF 477 R ++ Y A + + ++ + + F Sbjct: 674 HHLLLRFHYNDSLLRRMAKQIMREDVYADANEQYIFEDMQVMSDFELHQLCVRFPSIKRF 733 Query: 478 EGDNATWWNFDPRVEWLMGYLTS-HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 + W +V L L + ++LV LE L+ + ++ Sbjct: 734 ALEGTPWMQT-AKVLRLQKLLNEFKKDDRILVFSQFTQVLDILEFALKSMD-VKYLRMDG 791 Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 + R F+ + LL ++ G G N A+ ++M+D FNP Q R Sbjct: 792 STPVETRQGLIDMFSTKPKYKLFLLSTKAGGFGINLTAANVVIMYDCSFNPFDDLQAEDR 851 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLIN 652 R+GQ + I+ E T + + L I + ++ + Sbjct: 852 AHRVGQTRPVSIYRLVTENTIDENIQKLAFAKLALESSMVTNTEEIQKELCKEIFD 907 >UniRef50_A2EPF9 Type III restriction enzyme, res subunit family protein n=1 Tax=Trichomonas vaginalis RepID=A2EPF9_TRIVA Length = 1439 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 103/602 (17%), Positives = 211/602 (35%), Gaps = 45/602 (7%) Query: 99 EVFLDSKLVFSKPQDRLFAGQIDRMD-RFALRYRARKYSSEQFRMPYSGLRGQRTSLIPH 157 E + + + R Q R + E + +P R L + Sbjct: 286 EDEIQDNEAIADFERRNDISQYKEPRIALIQRPELFQLFGENYPLPP---FPTRRELRDY 342 Query: 158 QLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQW 215 Q++ + + R +LADE+GLGKT++ I++ G L+I P + QW Sbjct: 343 QIDGINWLRRNWYNHRNCILADEMGLGKTVQGVNIIYDLYRIGDPGPFLVIAPLSTLDQW 402 Query: 216 LVEMLRRFNLRFALFDD-ERYAEAQHDAYNP---FDTEQLVICSLDFARRSKQRLEHLCE 271 + E L F + A+++ P +++ + D + E Sbjct: 403 VREFKNWTPLNVVKFTGPGKEIIAKYELTYPNTDVPKFNVILTNPDVLIKFD---EIFMN 459 Query: 272 AEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLL 331 W ++VDEAH L + ++ Y+ +E + ++ +LL+T TP Q ++ ++ L L+ Sbjct: 460 FCWHYVIVDEAHEL---RNDETKRYKFMESM--NIQNLLLMTGTPIQNNLKELWSLLHLI 514 Query: 332 DPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANS 391 D +F F++ + +A L ++D++P + Sbjct: 515 DRAKFDSVESFMQLYDTEKDPQNATKRL-------------------QEDLKPYMLRRKK 555 Query: 392 DSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVS 451 + + ++E + ++ ++L+R+ + + LP A+++ Sbjct: 556 EDVEKSIGKKEETIVNVELTRAQKMLYRSLIEQKIPELAASDSSHRRALPELPNLAMQLR 615 Query: 452 GIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICA 511 + +D + + + EF+ V+ L+G L +K+L+ Sbjct: 616 KVCCHPYLIQDYEKIIGDVLQGMSEFDQLVKCSGKM-VFVDKLLGKLHPL-GKKILIFSQ 673 Query: 512 KAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGR 570 + Q L R + G +R + F + V LL + G G Sbjct: 674 FKHVLDIISQFLDMR-NYKYERIDGGSHGNDRQKKMDRFNDPTQDIFVFLLSTRAGGLGL 732 Query: 571 NFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA-HDIQIHVPYLEKTAQSVLVRWYHEGL 629 N A +++FD +NP Q R RIGQ + ++ T +S + + L Sbjct: 733 NLTAADTVIIFDSDWNPQNDVQAQARCHRIGQTAEKVVVYRLITRGTYESEMFDRASKKL 792 Query: 630 DAFEHTC---PTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRD 686 + + +L N + + D + ++ R Sbjct: 793 GLDQAVLDHHANNESESKMDKEELENLIKRGAYYQLTDMNYEEGDNFTSQSIDEILDSRT 852 Query: 687 RL 688 R+ Sbjct: 853 RI 854 >UniRef50_B9RSY8 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9RSY8_RICCO Length = 3502 Score = 305 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 103/577 (17%), Positives = 197/577 (34%), Gaps = 42/577 (7%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGR--RHAPRVLLADEVG 180 M+ Y E + L G + L +Q+N + + +LADE+G Sbjct: 969 MESNEKYYMMAHSVKESISEQPTCLHGGK--LREYQMNGLRWLVSLYNNHLNGILADEMG 1026 Query: 181 LGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQ 239 LGKT++ ++ + L++VP ++ W E+ + E + Sbjct: 1027 LGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWESEINFWAPSIHKIVYSGPPEERR 1086 Query: 240 HDAYNPF--DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQ 297 +++ + ++ +K L + W +++DE H + ++A + Sbjct: 1087 KLFKEKIVHQKFNVLLTTYEYLM-NKHDRPKLSKIHWHYIIIDEGHRI---KNASCKLNA 1142 Query: 298 AIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVA 357 ++ LLLT TP Q +E +A L L PN F+ F + + ++ A Sbjct: 1143 ELKH--YQSAHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQW---FNKPFESNA 1197 Query: 358 MLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVL 417 A L ++E N+L Q + P + ++ E + L+ Sbjct: 1198 DSSADEALLSEEENLLIINRLHQVLRPFV--LRRLKHKVENELPEKIERLIRC------- 1248 Query: 418 FRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEF 477 N K KR + ++ ++ + +M R L+ + + Sbjct: 1249 --NASAYQKLLMKRVEENLGSIGNSKARSVH--NSVMELRNICNHPYLSQLHVDEVDNLI 1304 Query: 478 EGD-NATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVF 534 ++E L L + +VL +E+ L ++ R Sbjct: 1305 PKHFLPPIIRLCGKLEMLDRILPKLKATDHRVLFFSTMTRLLDVMEEYLTMKK-YRYLRL 1363 Query: 535 HEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQR 593 S ER F + ++ + LL G G N Q A +++FD +NP + Q Sbjct: 1364 DGHTSGNERGALIEQFNKSNSPYFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQA 1423 Query: 594 IGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTG----RTIYDSVYND 649 R RIGQ D+ + +T + + L + G T + Sbjct: 1424 QARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREY 1483 Query: 650 LINYLASPDQTEG----FDDLIKNCREQHEALKAQLE 682 L + L + E DD + + + E+ E Sbjct: 1484 LESLLRECKKEEAAPVLDDDALNDILARSESEIDVFE 1520 >UniRef50_UPI00016AD347 helicase, Snf2 family protein n=2 Tax=Proteobacteria RepID=UPI00016AD347 Length = 711 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 151/755 (20%), Positives = 267/755 (35%), Gaps = 88/755 (11%) Query: 53 VMFNPGD----TITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVF 108 + F G + V +G D + +L Sbjct: 23 IRFRAGTDCPPRVVKAAAMLFDVS-----DGWRLPEARFDDLGRFLADAAKT--GHELRA 75 Query: 109 SKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRR 168 AG+ D R A + + R + L P+Q A R Sbjct: 76 YDDALDFVAGRNDASR----RATALTAAFPRGAADPLLKRLLKVPLYPYQAEGALFAVR- 130 Query: 169 HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFA 228 A R L+ DE+GLGKT++A +VL++ P +L++QW E+L RF+ R + Sbjct: 131 -AGRALICDEMGLGKTVQAIAAAEILTRHFGVSKVLVVCPTSLKYQWQSEIL-RFSGRAS 188 Query: 229 LFDDERYAEAQHDAYNPFDTEQLV-ICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 E Q N + E I + + + L+ + E +L++VDEA + Sbjct: 189 RVVAGSLVERQ----NEYAEEDFCKITNYEKLKSD---LDMISAWEPELVIVDEAQRI-- 239 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQK 347 ++ + +A++++ P ++LT TP + +E + ++ +D +R + + E + Sbjct: 240 -KNWNTIAAKALKRIG--SPYAVVLTGTPLENKVEELISIVQFVDQHRLGPTWKLLHEHQ 296 Query: 348 NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSML 407 V D + KL + MI + E L Q N + ++L Sbjct: 297 ----VKDEAGRVTGYTKLEKINRTLAPIMIRRRKSEVLRQLPNRTDQ----------NLL 342 Query: 408 MDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDM 467 + + V +R T L Q + + + + S Sbjct: 343 VPMTEMQMTHHAENADVVAKIVQRWRKTKFLSDQDQRRLTCALQNMRMSCNST------- 395 Query: 468 LYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLRERE 527 + + D + L L + K +V T + + L+ + Sbjct: 396 -------YLLDQETDHGVKADE-LATLFESLFAQPEAKAVVFSQWTRTHEIVIRRLK-KL 446 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNP 587 GI FH G+ R F +D +V L ++ GS G N Q AS +V DLP+NP Sbjct: 447 GIGYVSFHGGVPSARRPALLERFR-DDPDCRVFLSTDAGSTGLNLQHASTLVNMDLPWNP 505 Query: 588 DLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEG-------LDAFEHTCPTGR 640 +LEQRI R+ R+GQ ++I + T + ++ LD G Sbjct: 506 AVLEQRIARIHRMGQRKPVRIINYVAKGTIEEGMLSVLAFKRSLSAGILDGGTGEISLGG 565 Query: 641 TIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGG-EKA 699 + + D+ N + EG + A +L++ E H+ G + Sbjct: 566 SRLNRFMKDVENV--TGRMGEGEAMAVVEDAVNAAAASGELQEDATTA-EAHACGAWTRP 622 Query: 700 QALAESIEEQDDDTN----LIAFAMNLFDIIGINQDDRGDNMIVLT-PSDHMLVPDFPGL 754 +A+A QD + L+ F + L + + D + V P+ + P Sbjct: 623 KAIAAETVPQDARPDPWSGLLQFGVELASALSASNDGDAAHPWVERDPATGVRSLKLPLP 682 Query: 755 SEDGITITFDREVALAREDAQFITWEHPLIRNGLD 789 D R +A A + H L+RNG++ Sbjct: 683 PPDTA-----RRLADALSEIS-----HALLRNGVE 707 >UniRef50_B9N3S4 Chromatin remodeling complex subunit n=4 Tax=Magnoliophyta RepID=B9N3S4_POPTR Length = 2332 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 111/595 (18%), Positives = 214/595 (35%), Gaps = 69/595 (11%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSL-----IPHQLNIAHDVGR--RHAPRVLL 175 +++ + R +K + + + L Q L PHQL + + + + V+L Sbjct: 711 LEKDSARDDLQKGRRDGLQNEIATLMEQPEELKGGSLFPHQLEALNWLRKCWHKSKNVIL 770 Query: 176 ADEVGLGKTIEAGMILHQQLLSGAAE-RVLIIVPETLQHQWLVEMLRR-FNLRFALFDDE 233 ADE+GLGKT+ A L A L++VP + W E NL + Sbjct: 771 ADEMGLGKTVSACAFLSSLYFEFKASLPCLVLVPLSTMPNWFSEFALWAPNLNVVEYHGC 830 Query: 234 RYAEAQHDAY-------NPFDT------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVD 280 A A Y N + +++ + + L W++LVVD Sbjct: 831 AKARAMIRLYEWHASDPNKMNKKTTSYKFNVLLTTYEMVLADSTY---LRGVPWEVLVVD 887 Query: 281 EAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFA 340 E H L +++ S+ + + + +LLT TP Q + + L L P F Sbjct: 888 EGHRL---KNSGSKLFSLLNTFS--FQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLT 942 Query: 341 QFVEEQKNY--RPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQS 398 F E+ + + + L+A + L + + + Q+I P + + S Sbjct: 943 SFEEKFNDLTTAEKVEELKKLVAPHMLRRLKKDAM------QNIPPKTERMVPV--ELSS 994 Query: 399 ARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARK 458 + E ++ + + + RN GV ++ + I + L + G Sbjct: 995 IQAEYYRAMLTK---NYQMLRNIGKGVA---QQSMLNIVMQLRKICNHPYLIPGTEP--- 1045 Query: 459 SAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT--SHRSQKVLVICAKAATA 516 + + + L+ RI ++ L L +VL+ Sbjct: 1046 --DSGSLEFLHEMRI------------KASAKLTLLHSMLKILYKEGHRVLIFSQMTKLL 1091 Query: 517 LQLEQVLREREGIR-AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFA 575 LE L G + +S+ +R A A F ++ + LL + G N A Sbjct: 1092 DILEDYLTIEFGPKTYERVDGSVSVSDRQTAIARFNQDKSRFVFLLSTRSCGLGINLATA 1151 Query: 576 SHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGL---DAF 632 ++++D FNP Q + R RIGQ+ + ++ + + + +++ + L F Sbjct: 1152 DTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF 1211 Query: 633 EHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDR 687 + + + + D + + G D+ N + + A LEQ + + Sbjct: 1212 VNKSGSQKEVEDILRWGTEELFSESSSMNGKDNSDNNINKDKDDTIADLEQKQRK 1266 >UniRef50_UPI000185C06D superfamily II DNA/RNA helicase, SNF2 family n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C06D Length = 1004 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 135/656 (20%), Positives = 253/656 (38%), Gaps = 47/656 (7%) Query: 44 ARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLD 103 +R ++P +PG TI D + + K +G D A LD Sbjct: 9 SRGNTPDAFDQLSPGVTIKVRDEYWLVTHVTKSSDGFKVKARGISDYVRDTAATFYTALD 68 Query: 104 SKLVFSKPQDRLFAGQIDRMDRF-----ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQ 158 L P + D F L R+ ++ + +Q Sbjct: 69 RDLEVFDPAK--VTIEPDNSPHFRRSRLWLESTIRQTPVPLYQNNLEVSTRMLADPLDYQ 126 Query: 159 LNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWL 216 LN PR+LLAD VGLGKT+E GMI+ + + G ER+L++ P+ + Q+ Sbjct: 127 LNAVRKALSPEHIRPRILLADAVGLGKTLEIGMIVAELIRRGRGERILVVTPKHVLEQFQ 186 Query: 217 VEMLRRFNLRFALFDDERYAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAE 273 E+ RF + D + + + NPF VI S+D + S + L + Sbjct: 187 QEIWTRFAIPLVRLDSHGIQKVRQKLPASKNPFSYFPRVIVSMDTLK-SAKYKAQLEKVN 245 Query: 274 WDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDP 333 WD++V+DE H + ++ ++ LA ++L +ATP ES L+LLDP Sbjct: 246 WDIVVIDEIH---NATNSGTQNNDLARTLAPRTEALILASATPHNGNPESFKEILKLLDP 302 Query: 334 NRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS 393 + A +++ ++ S + +++G ++ + S Sbjct: 303 --------LAVRPDGSIDMGLAKKLIIRRHRNSPEVKSVVGAKWAPREEPLNIPVEASAE 354 Query: 394 EDAQSA--RQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVS 451 E+A + R +S + LF T L L P + +IK Sbjct: 355 ENAVANELRDTWISATDSVDTSRSHLFAWT-----------LVKAFLSSPAALEASIKNR 403 Query: 452 GIMGARKSAEDRARDMLYPERIYQ-EFEGDNATWWNFDPRVEWLMGY--LTSHRSQKVLV 508 + ++ L +R+ + ++ + V +L+ ++ +V++ Sbjct: 404 LRTIETQHGTTNNQEQLALQRLLELNYKVTPEASNKYASLVNYLIETVGISKRSKNRVVI 463 Query: 509 ICAKAATALQLEQVLREREGIRAAV---FHEGMSIIERDRAAAWFAEEDTGAQVLLCSEI 565 + +T L++ L + A H MS IE+ F DT +VL+ ++ Sbjct: 464 FSERVSTLGWLQENLIRDLKLSPAAVKTMHGQMSDIEQMELIDEFKRTDTKLRVLITGDV 523 Query: 566 GSEGRNFQF-ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW 624 SEG N +V +D+P++ ++QR GR+DR GQ ++ +I L+ + + Sbjct: 524 ASEGVNLHAQCHDLVHYDIPWSLIRIQQRNGRIDRYGQENNPRIAALLLDPSDADAVGE- 582 Query: 625 YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQ 680 H E + + D+ + L+ ++ + + D+++ R+ +K Sbjct: 583 IHVLTKLIEREYEANQLLGDA--SSLMGQHSAKREEDEIRDVLRGARDFDSTVKTA 636 >UniRef50_A2F9K3 F/Y-rich N-terminus family protein n=1 Tax=Trichomonas vaginalis RepID=A2F9K3_TRIVA Length = 1639 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 115/610 (18%), Positives = 211/610 (34%), Gaps = 61/610 (10%) Query: 154 LIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLSGAA-ERVLIIVPET 210 L +QL+ + + ++ADE+GLGKT + L S LI+VP + Sbjct: 248 LYKYQLDGLNFLIHSWFKNNNAIIADEMGLGKTAQVSTFLDFLNKSQKIFGPFLIVVPLS 307 Query: 211 LQHQWLVEMLRRFNLRFALFDDERYAEA---QHDAY---NPFDTEQLVICSLDFARRSKQ 264 W E+ +L+ + + +++ Y Q+++ + + A +SK Sbjct: 308 TLDHWYRELTDWTDLKVLILRGTKIERQLIFENELYYEGTEIPRFQIMLTTGEIALKSKT 367 Query: 265 RLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESH 324 E EW +LV DEAH L + S+ A+++ +L+T TP Q + Sbjct: 368 VFEQF---EWQVLVFDEAHRL---KSHTSKLLLAVKEF--KSQYKVLMTGTPLQNNIGEL 419 Query: 325 FARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEP 384 F L +DP F D +F E + V + E Sbjct: 420 FTLLNFIDPQLFDDRTKFSESFADLSEKKQIVE-------------------LKELIEPF 460 Query: 385 LLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQY 444 +L+ D E +E++ + R +R + F R L Sbjct: 461 MLRRLKGDVEKKLIPLEEIIIEC-GMTKSQREYYRAVFTKNQEFLTRCEKRRLANLNNIS 519 Query: 445 QTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD--NATWWNFDPRV---EWLMGYLT 499 KV AED + +E + T ++ + L+ L Sbjct: 520 MELRKVCNHPYLITGAEDAILIEKMQQLGLKERTNEFELETLIRTSGKLILVDKLLANLK 579 Query: 500 SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV 559 +VL+ L+ +L R + + +R + F E++ Sbjct: 580 KE-GHRVLIFSQMTKMLDLLQDMLTYR-NYKYRRIDGTVRGKDRQASIDDFQEQEDIFVF 637 Query: 560 LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS 619 LLC+ G G N A +++D +NP Q R RIGQ +++++ + + + Sbjct: 638 LLCTRAGGVGINLTSADRCIIYDSDWNPQNDIQATARCHRIGQTKEVKMYRLITKNSYER 697 Query: 620 VLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKA 679 + + L + D+ +L + DD N + E + A Sbjct: 698 SMFDTASKKLGLDKAILENDTEHKDA--KELEKMIKIGAYHAFEDDENANEINEDEDINA 755 Query: 680 QLEQGRDRLLEIHSNGGEKAQA---LAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDN 736 +E+ E H + Q+ + +I E+++DT +FD + G+ Sbjct: 756 IIERS-----EKHIHDPSSGQSFSKIQFNITEKEEDTK-------IFDDPNFWKKYLGET 803 Query: 737 MIVLTPSDHM 746 +D M Sbjct: 804 PEQNPETDIM 813 >UniRef50_C1E7E6 SNF2 super family n=2 Tax=Micromonas RepID=C1E7E6_9CHLO Length = 712 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 101/540 (18%), Positives = 184/540 (34%), Gaps = 52/540 (9%) Query: 151 RTSLIPHQLNIAHD--VGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVP 208 R L +QL ++ +LAD++GLGKTI+ L G L+I P Sbjct: 139 RAELREYQLKGVKWLIALYQNGLNGILADQMGLGKTIQTIGFLSHLRSKGILGPYLVIGP 198 Query: 209 ETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF--------DTEQLVICSLDFAR 260 + W+ E +F F + + + + N DT +++ S + Sbjct: 199 LSTLPNWVNEF-NKFCPEFPVVLYHGSKQERAEIRNRRLPLSTTIKDTFPVIVTSFEIVM 257 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG 320 ++ L + + LVVDE H L ++ + + ++ + LLLT TP Q Sbjct: 258 ADRK---FLQKYNFKYLVVDEGHRL---KNFDCKLIRELKTIP--TANKLLLTGTPLQNS 309 Query: 321 MESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 + ++ L L P+ F D QF + D A + + E + Sbjct: 310 LPELWSLLHFLLPDVFSDLTQF-------QNWFDFSQQDDADGDKEASKRVKVVEKLHGI 362 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPL 440 LL+ D E ++E+ VL+ + K F ++ + Sbjct: 363 LKPFLLRRLKGDVETNLPRKKEI------------VLYAHMVETQKKFNDALVNKTIADV 410 Query: 441 PTQY--QTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNA-----TWWNFDPRVEW 493 + + + +G ++ +P+ I +G + Sbjct: 411 LKKISGDSGLVPAGSTALNNMLMQLRKNCNHPDLISGGLDGSIMFPSADELVEQCGKFRL 470 Query: 494 LMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA 551 L LT R K L+ +E L E++G + + ER + F Sbjct: 471 LDRLLTKLRDKGHKTLIFSQMTKMLDLIESYL-EQKGQKVCRIDGSVQWQERKKQMDEFN 529 Query: 552 EEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVP 611 LL + G G N A ++++D +NP Q + R RIGQ + + Sbjct: 530 TNPEYGVFLLSTRAGGLGINLTAADTVIIYDSDWNPHQDMQAMDRCHRIGQTKPVHVLRL 589 Query: 612 YLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG---FDDLIK 668 + + ++ + L A E T + + + P + G D+LI Sbjct: 590 ATAHSVEGKMLSRANSKL-ALEKLVITKGNFRQEIGKEAEDGGKRPKASGGGVSTDELIA 648 >UniRef50_UPI000180CDBD PREDICTED: similar to helicase, lymphoid-specific n=2 Tax=Ciona intestinalis RepID=UPI000180CDBD Length = 1444 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 102/576 (17%), Positives = 212/576 (36%), Gaps = 45/576 (7%) Query: 154 LIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 L +Q+ + + +LADE+GLGKTI+A ++ + + G L+ P T Sbjct: 851 LRDYQITGYQWLKIMYENGESGILADEMGLGKTIQAIAMVCKLVEVGVNGPFLVCAPTTT 910 Query: 212 QHQWLVEMLRRFNLRFALF-----DDERYAEAQHDAYNPFDTEQLV-ICSLDFARRSKQR 265 W E ++F + +L ERY + + D Q+V I S + R + Sbjct: 911 VANWFNEF-KKFAPKISLMLYHGTAPERYHLIETLMEHLNDKTQVVVITSYEILLRDR-- 967 Query: 266 LEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHF 325 L + W L++DE H + +++ SR + +++L + G L+LT TP Q + + Sbjct: 968 -PALMKHSWGYLILDEGHRV---KNSNSRTIKELKKLT--IRGKLMLTGTPIQNNLTELW 1021 Query: 326 ARLRLLDPNRFHDFAQF-----VEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 + L L P F D A F ++ + V + +L L + ++ ++ ++ Sbjct: 1022 SLLNFLLPAVFDDMAIFRSWFNLDVLQKDEKVLSMLHQVLTPFLLRRSKSDVDIKIPPKR 1081 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLM---DRHGTS------RVLFRNTRN-----GVK 426 ++ + A + ++ + L+ D + ++ N++ +K Sbjct: 1082 EMLVMAPLACLQEKFYRATVDRSIRHLLINKDYFNITPGVAHPDLIASNSQEMKDETSLK 1141 Query: 427 GFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWN 486 R + + + ++ ++ + + + YP + + + Sbjct: 1142 YPTTRRSMKRTIEPDDDFVVNVTLNNMIMQLRKCCNHPYLIQYPLQPGTDIFKVDEDLIT 1201 Query: 487 FDPRVEWLMGYLT--SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERD 544 ++ L L R KVL+ + L+ R+ F +R Sbjct: 1202 SCGKMMLLDRMLPVLKERKHKVLLFSQMTSMLDVLQDYCVMRK-FSFVRFDGSTKCEDRF 1260 Query: 545 RAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 F + LL + G G N A ++++D +NP Q R RIGQ Sbjct: 1261 AYIEEFNNDPNVFLFLLSTRAGGLGINLTGADTVIIYDSDWNPQNDSQAQDRCHRIGQER 1320 Query: 605 DIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFD 664 + ++ T ++ E + +L N + SPD+ Sbjct: 1321 PVMVYRMVTMATIDQQIMERAARKRTM-EKMIMHEDKFKGKLAMEL-NKVVSPDELLTL- 1377 Query: 665 DLIKNCREQHEALKAQL--EQGRDRLLEIHSNGGEK 698 L N ++ K + ++ +++L+ S ++ Sbjct: 1378 -LQSNSLDRVAENKESIISDEELNQMLDRSSLKQDQ 1412 >UniRef50_A2DZY5 SNF2 family N-terminal domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2DZY5_TRIVA Length = 1325 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 87/501 (17%), Positives = 171/501 (34%), Gaps = 47/501 (9%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVGLGKTIEAGMILHQQ-LLSGAAERV 203 L L +Q + + +LADE+G+GKTI+A ++ Sbjct: 182 LFSNNNQLKNYQYVGVQWLFDKWKIQKGGILADEMGMGKTIQALALMQTLKFFFKVKGPF 241 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTE--------QLVICS 255 L+I P + W E NL ++ + + F+ + +L+I Sbjct: 242 LVICPLSTAFNWQKECNAWTNLNSIVYTGNDESRNTIKNFCIFNEKSKDKKMKVELIIVP 301 Query: 256 LDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTAT 315 D A R + + + + +DEAH L + S+ YQA+ ++ H LLT T Sbjct: 302 YDNAIRD---ISFFQKFRFAVQFIDEAHRL---KSYHSKTYQALSKIPTHCSF--LLTGT 353 Query: 316 PEQLGMESHFARLRLLDPNRFHDFAQFVEEQ-----KNYRPVADAVAMLLAGNKLSNDEL 370 P Q +E + L +DP F + + + + ++ + + K E Sbjct: 354 PIQNDLEELISLLHFIDPTAFSNIEELASKYNTSDFDQMKELSSLLENYILRRKKDTFEK 413 Query: 371 NMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPK 430 ++ + ++E + R EL+ L TS F+N ++ Sbjct: 414 SIKPKEEIVINVELTHEQRLIYKLLLDDHRDELLQTLGTSSLTS---FKNISMELRKICN 470 Query: 431 RELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPR 490 T + + QY+ ++ M ++ E + + Sbjct: 471 HPFLTHETLVKEQYKQRKGINREMTEQEDMESLVGVSGKMILLDKLLPKLKEG------- 523 Query: 491 VEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF 550 KVL+ +++ L + +S+ R + F Sbjct: 524 ------------GHKVLIFSQMTKVLDIIQRFL-DWRNFHYERLDGSVSVERRSESIERF 570 Query: 551 AEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610 D LL + G +G N A ++++D +NP Q + R RIGQ +++++ Sbjct: 571 TTFDDSFVFLLSTRAGGQGINLTVADTVIIYDSDWNPQNDIQAMARCHRIGQDKEVKVYR 630 Query: 611 PYLEKTAQSVLVRWYHEGLDA 631 + + + + L Sbjct: 631 LITKNSYEEEMFERASMKLGL 651 >UniRef50_A2ED18 SNF2 family N-terminal domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2ED18_TRIVA Length = 1425 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 109/602 (18%), Positives = 211/602 (35%), Gaps = 66/602 (10%) Query: 154 LIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIE-AGMILHQQLLSGAAERVLIIVPET 210 L +QL + + + +LADE+GLGKT++ ++ SG L++ P + Sbjct: 249 LRDYQLQGLNWLRYCWYNHYNSILADEMGLGKTVQLVTTLIEVSKASGIRGPYLVLAPLS 308 Query: 211 LQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQ-----------LVICSLDFA 259 H W E +L ++ A+ Y E +VI + + Sbjct: 309 TLHHWEKEFQNWSDLNVIVYHGCPLAKEVIQRYELCKIENGVRDTEKLNCEVVITNYETF 368 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 E EW LV+DE H L ++ S+ Y ++QL+ LLT TP Q Sbjct: 369 MSD---FEIFRRVEWRYLVLDEGHRL---KNHQSKCYGLLQQLS--YKHCTLLTGTPIQN 420 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 +E ++ L LL P F D F++E + + + Sbjct: 421 NVEELWSLLHLLQPELFDDLPAFLQEFGQIDNA-------------------QTLQNLQQ 461 Query: 380 QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 LL+ SD E +A++E + ++ T + +R + + ++ + LP Sbjct: 462 VIKPFLLRRKKSDVETTIAAKEETIIQ-VELTRTQKTFYRAFLDENRDVLLSQITSGALP 520 Query: 440 LPTQYQTAIKVSGIMGAR-KSAEDRARDMLYPERIYQEFEGDNA--TWWNFDPRV---EW 493 ++ K A D + + D ++ + Sbjct: 521 SLKNLMMQLRKVCNHPYLIKGATDTILEQFTKASPENTPKSDIELKALVQSSGKLILIDK 580 Query: 494 LMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEE 553 L+ L + KVL+ LE + +G + ++ +R A F + Sbjct: 581 LLPKLKAD-GHKVLIFSQMVKVLDILEDYI-AIKGYKCERIDGSVAENDRQAAIERFGND 638 Query: 554 DTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYL 613 LLC++ G G N A ++++D +NP Q R RIGQ ++++ Sbjct: 639 PDAFIFLLCTKAGGVGINLTAADTVIIYDSDWNPQNDIQAQSRCHRIGQTQKVKVYRLVT 698 Query: 614 EKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNC-RE 672 T + ++ + L + DSV + + + + + + + Sbjct: 699 RGTYELDMLDRASKKL-------GLDHALLDSVEVSNNPKMEAQEIDKLLRRGVYDIAND 751 Query: 673 QHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDD 732 ++ D++L S+ + ++ + D + F+ D GI+ D Sbjct: 752 DDTEIEKFCAADIDQILLDRSHDLKTNES------KTDSSFSKATFSAETND--GIDVKD 803 Query: 733 RG 734 + Sbjct: 804 KD 805 >UniRef50_B0W5L6 DNA repair and recombination protein RAD54 n=1 Tax=Culex quinquefasciatus RepID=B0W5L6_CULQU Length = 821 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 120/682 (17%), Positives = 248/682 (36%), Gaps = 74/682 (10%) Query: 18 GLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEE 77 G GT+ V ++ TL E+ S V G + VE + E Sbjct: 93 GDGTLTVVGGKSATLR----DEDGKVIGSAGSVKGEELEEGSRLIVGSKEVELVERIDGE 148 Query: 78 NGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI----------------- 120 +L +E+ ++ V ++++ F P + + AG+ Sbjct: 149 GRVL------EMAKENDGPVKRVRVEARGGFKPPAESMCAGRPIVVSSFKQVGTVGEEAI 202 Query: 121 -DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEV 179 + +R + + + + + + S + ++ + +LADE+ Sbjct: 203 AEDFVPLTMREPSFDHQWKYNKGKVPVVTREGVSFL-YECVLGMKREDSEQFGAILADEM 261 Query: 180 GLGKTIEAGMILHQQLLSGA-----AERVLIIVPETLQHQWLVEMLRRFNLRFALFDDER 234 GLGKT++ +++ + G +RVLI+ P +L W E+ + + ++ Sbjct: 262 GLGKTLQTLALIYTLMKQGPYGQPIVKRVLIVTPSSLVDNWDREITKWLK-QERIYTFIV 320 Query: 235 YAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSR 294 + Y ++I S + + LE + ++DL+V DE H L +++ + Sbjct: 321 GPNNKLKKYAQSAHIPILIISYELLAKQVSELETV---KFDLIVCDEGHRL---KNSSIK 374 Query: 295 EYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVAD 354 + ++ + +LLT TP Q ++ + + ++P +++F + +N + Sbjct: 375 IAEVLDGI--DCRRRILLTGTPIQNDLQEFHSLINFVNPGLLGTYSEFKAKYENPIVQSQ 432 Query: 355 AVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTS 414 +L +L LN L + + + NS + +QELV Sbjct: 433 QPNVLPQLQELGQTRLNELNSITSSFILRRTQEVNNSYLPE----KQELVIFAHPSELQE 488 Query: 415 RVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIY 474 R+L +K + + I P Q T +K + S D P+ + Sbjct: 489 RLLTL----ALKHYEQSGTSAI---TPLQLITILKKICNHPSLISTTDSKD----PDSLQ 537 Query: 475 QEFEGDNATWWNFDP----RVEWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREG 528 +W + P ++ L L + R +KV+++ + T + L E Sbjct: 538 NLLISQLPSWQHMGPADSGKLAILESLLEALIERREKVVIVSYFSKTLDMIAG-LCEHYN 596 Query: 529 IRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNP 587 + +R + A F + + LL ++ G G N AS +V+FD +NP Sbjct: 597 YKFCRLDGATPSQDRGKLVATFNNPSSDIFIFLLSAKAGGIGLNLVGASRLVLFDNDWNP 656 Query: 588 DLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVY 647 Q + R+ R GQ ++ I+ + + + + ++ D Sbjct: 657 ASDLQAMSRIWRDGQTRNVFIYRLITAFSIEEKIFQRQISK-------TSLSGSVVDQ-K 708 Query: 648 NDLINYLASPDQTEGFDDLIKN 669 +L N S D+ + L++ Sbjct: 709 QNLSNLKLSDDELKDLFSLVEE 730 >UniRef50_UPI0001C42EFF SNF2 helicase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42EFF Length = 998 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 93/513 (18%), Positives = 190/513 (37%), Gaps = 57/513 (11%) Query: 153 SLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILH---QQLLSGAAERVLIIV 207 L P+Q + + LAD++GLGK+I+ + + + L+I Sbjct: 521 ELRPYQHQGVSWIAQLRHTGFGGCLADDMGLGKSIQTIAYILFTLENQTKEQRKPFLLIC 580 Query: 208 PETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLE 267 P +L + WL E +F +F + + + +++ S A R E Sbjct: 581 PTSLIYNWLKEC-EKFAPSARIFVHHGQSRLTEQEVDSMEEWDIILTSYQLAVRDT---E 636 Query: 268 HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 L W+ L++DEA H+ ++ +++ +AI+Q+ L LT TP + ++ ++ Sbjct: 637 LLKNVTWNGLILDEAQHI---KNVDTKQRRAIKQI--KAAHRLALTGTPIENRLKELWSL 691 Query: 328 LRLLDPNRFHDFAQFVE------EQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQD 381 + +++P+ F F + E+ + + L+ L + + L ++ + Sbjct: 692 IDVINPSFLGSFKSFQDSFIKPIEKDQNQDKLKTLQQLIYPFILRRKKSDELLQLGLPEK 751 Query: 382 IEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLP 441 +E + + + S + + Q +V ++ R N V +R L L Sbjct: 752 LEQVHKV--TLSVEQAALYQAVVDDILSR-----------LNQVSQLERRALILKSLTKL 798 Query: 442 TQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH 501 Q +P + + E +D + + Sbjct: 799 KQI----------------------CNHPAQFLKTDEVSRHDSRKWDELFALIEDI--HN 834 Query: 502 RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLL 561 R++KVL+ + + L R H ++ +R A F E+ +L Sbjct: 835 RNEKVLIFSQYKEMGRLIAEELERRYQKDVPFLHGSLTRPKRQEAIERFQEDPEVTAFVL 894 Query: 562 CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVL 621 + G G N A+H++ +D +NP + Q R RIGQ D+ +H T + + Sbjct: 895 SLKAGGVGLNLTAANHVIHYDRWWNPAVENQATDRAFRIGQTKDVTVHKLMTSGTLEERI 954 Query: 622 VRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYL 654 + + + G + N+ I++L Sbjct: 955 DKMLTQKQSLADQVLQAGEQQVTELSNEEIHHL 987 >UniRef50_UPI00016929C4 SWF/SNF family helicase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016929C4 Length = 948 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 119/623 (19%), Positives = 221/623 (35%), Gaps = 72/623 (11%) Query: 53 VMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQ 112 V +PG ++ + VE +K++ GL L E + K Sbjct: 381 VQIDPGL----YEQMEQMVERMKKQKGLTLKDVLELHLLEGEDQVPVSGEADKTK----- 431 Query: 113 DRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHD--VGRRHA 170 RL ++ LR + + S +G R +L P+Q R+ Sbjct: 432 QRLL---LEVEVTDHLRQLIDRMTHAASIPGISTPKGFRGTLRPYQSEGISWMHFLRQLQ 488 Query: 171 PRVLLADEVGLGKTIE-AGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFAL 229 LAD++GLGKTI+ +L + G + L+I P ++ W +E+ +RF + Sbjct: 489 LGGCLADDMGLGKTIQWISYLLKAKEDGGLSSPSLLICPTSVLGNWQMEL-KRFAPSLNV 547 Query: 230 -FDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 LV+ S + ++ L + WD + +DEA ++ Sbjct: 548 HLHYGPNRRKGVSFEQAVSATDLVLTSYTLSHLDEEELSTVY---WDSICLDEAQNI--- 601 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 ++A +++ +I +L H + LT TP + + ++ L+P +F + + Sbjct: 602 KNAYTKQAASIRKLKGH--HRIALTGTPIENRLTELWSIFDFLNPGYLGTQREFTQRYVH 659 Query: 349 -YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEP---LLQAANSDSEDAQSARQELV 404 + D ++ + L + + Q P ++ + S + S + + Sbjct: 660 SIERIQDTKSINQVQKLIRPFLLRRIKKDPAIQLDLPDKNEVKTFVTLSAEQASLYENYI 719 Query: 405 SMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRA 464 ++DR N G +R + L Q Sbjct: 720 HDMLDR-----------LNQAGGMGRRGIILAALTKLKQI-------------------- 748 Query: 465 RDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQV 522 +P + +E G W +++ L+ + R + K L+ T L+ V Sbjct: 749 --CNHPALVLKERPG--GPWEQRSGKLDRLVEMVHELRDEGDKCLIFTQFVDTGFLLQHV 804 Query: 523 LREREGIRAAVFHEGMSIIERDRAAAWFA-----EEDTGAQVLLCSEIGSEGRNFQFASH 577 L + G H G S +RD+ A F E++ LL + G G N A+H Sbjct: 805 LEQELGHPVLFLHGGSSKADRDKMIARFQDLTLPEDEQRYVFLLSLKAGGTGLNLTAANH 864 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP 637 + FD +NP + Q R RIGQ ++Q+H T + + + L + Sbjct: 865 VFHFDRWWNPAVENQATDRAYRIGQTRNVQVHKFITLGTLEERIDEMIEQKLGLSQQIVG 924 Query: 638 TGRT-IYDSVYNDLINYLASPDQ 659 G I + ++L L+ Sbjct: 925 QGENWITELDTDELKELLSLRKD 947 >UniRef50_A0BRC7 Chromosome undetermined scaffold_122, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0BRC7_PARTE Length = 1405 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 110/566 (19%), Positives = 209/566 (36%), Gaps = 71/566 (12%) Query: 147 LRGQRTSLIPHQLNIAHDVGRR--HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAE-RV 203 + R L +QL + + + VLLADE+GLGKTI++ L+ + + Sbjct: 445 IYKDRKLLRDYQLESLNWMIDAYYNNRNVLLADEMGLGKTIQSIAFLNHLVSMESCRGPF 504 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH--DAYNPFDT------------- 248 LII P + W +L L+ D++ + Y F T Sbjct: 505 LIIAPLSTLQHWKRSCEDWTSLNAVLYYDQQGQPGRQAIRDYEWFYTDISLKGNTLPSQE 564 Query: 249 ---EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEH 305 Q++I S + + ++ + + ++VDEAH L ++ ++ ++++L Sbjct: 565 LYKFQILITSFEVFNQDHST--YIQQIPFQFIIVDEAHRL---KNQNAKILASLKRLV-- 617 Query: 306 VPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKL 365 +++LT TP Q E ++ L ++P +F + QF + + + L Sbjct: 618 CSRIMILTGTPVQNNPEELWSLLNFIEPYQFPNLNQFKSQFGDLNTAEQIEKL---NKTL 674 Query: 366 SNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGV 425 L E + EQ I PL + N + + ++ L L + RN + Sbjct: 675 KPYILRRQKEDV-EQSIPPLQE--NIIDVELTNVQKTLYRALYE---------RNKSALI 722 Query: 426 KGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWW 485 +GF ++ L + + + ++ D+L E+ Sbjct: 723 QGFSQQTAQIASLNNLD-----MHLRKLCNHPLLLKEMHSDIL--EKSKGNEGEYQKILI 775 Query: 486 NFDPRVEWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIER 543 + ++ L L +K+L+ LE+ L + I+ + I+R Sbjct: 776 EYSGKMVLLDKMLKKFLKEDKKMLIFSQFTNMLALLEEYL-QFNQIKYEKITGDIKQIDR 834 Query: 544 DRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 A F ++ G QV LL ++ G +G N A +V+FD +NP Q R RIGQ Sbjct: 835 QNAIDRFNDQKKGRQVFLLSTKAGGQGINLTAAEIVVIFDSDWNPQNDIQATARAHRIGQ 894 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDA---------FEHTCPTGRTIYDSVYN----- 648 + ++ + T ++ + L F+ + T R + Sbjct: 895 DKQVTVYRFITKNTYEAKMFERAFAKLGLDQAIFMNGEFKSSDQTNRKLSKKELEILLKQ 954 Query: 649 ---DLINYLASPDQTEGFDDLIKNCR 671 L+ + + DD++ N R Sbjct: 955 GSLGLLEHFGQESIDQNIDDILNNTR 980 >UniRef50_P38144 ISWI chromatin-remodeling complex ATPase ISW1 n=47 Tax=Fungi/Metazoa group RepID=ISW1_YEAST Length = 1129 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 89/505 (17%), Positives = 181/505 (35%), Gaps = 54/505 (10%) Query: 139 QFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQ-L 195 QFR + + GQ L P+Q+ + + H ++ +LADE+GLGKT++ L Sbjct: 184 QFRESPAYVNGQ---LRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRY 240 Query: 196 LSGAAERVLIIVPETLQHQWLVEMLRRF-NLRFALFDDERYAEAQHDAYNPFDT-EQLVI 253 + L+I P++ + WL E+ R ++ + ++ A+ +VI Sbjct: 241 IEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLLGCDFDVVI 300 Query: 254 CSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLT 313 S + R K L + W+ +++DEAH + ++ S Q + + LL+T Sbjct: 301 ASYEIIIREKS---PLKKINWEYIIIDEAHRI---KNEESMLSQVLREFTSR--NRLLIT 352 Query: 314 ATPEQLGMESHFARLRLLDPNRFHDFAQFVEE------QKNYRPVADAVAMLLAGNKLSN 367 TP Q + +A L L P+ F D F + +++ + + +L L Sbjct: 353 GTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRR 412 Query: 368 DELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKG 427 + ++ ++ ++++ + ++ + + ++ + + +G+ Sbjct: 413 IKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKE------------ 460 Query: 428 FPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNF 487 K L I + L G D E + Sbjct: 461 -SKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTD--------EHLVYNAAKLQVLDKLL 511 Query: 488 DPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAA 547 E +VL+ + LE + +R +A Sbjct: 512 KKLKE---------EGSRVLIFSQMSRLLDILEDY-CYFRNYEYCRIDGSTAHEDRIQAI 561 Query: 548 AWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 + D+ V LL + G G N A +V++D +NP Q + R RIGQ + Sbjct: 562 DDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQV 621 Query: 607 QIHVPYLEKTAQSVLVRWYHEGLDA 631 ++ + + + ++ + L Sbjct: 622 KVFRLVTDNSVEEKILERATQKLRL 646 >UniRef50_D0NGD8 Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NGD8_PHYIN Length = 744 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 103/584 (17%), Positives = 195/584 (33%), Gaps = 49/584 (8%) Query: 154 LIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 L +QL + + +LADE+GLGKTI+ +L G LI+ P + Sbjct: 153 LRDYQLEGIRWLCNLFENGLNGILADEMGLGKTIQVIGLLAHLKALGVRGPHLIVAPLST 212 Query: 212 QHQWLVEMLRR-FNLRFALFDDERYAEAQ------HDAYNPFDTEQLVICSLDFARRSKQ 264 W E + ++ ++ + + + +VI S + + Sbjct: 213 LMNWANEFRKWAPSMPVVIYHGTKQERKEMRKNALNRKKKSDVNFPVVISSYEVMISDAR 272 Query: 265 RLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESH 324 W +V+DE H L ++ + + +++ LLLT TP Q + Sbjct: 273 AF-FSSGFVWKYMVIDEGHRL---KNMDCKLVRELKR--GRSENRLLLTGTPLQNNLTEL 326 Query: 325 FARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELN-----MLGEMIGE 379 ++ L + P+ F D F E ++ P A A A + + D L + + E Sbjct: 327 WSLLNFILPDVFDDLELF-ESWFSFTPDAVATAAATGESVAAQDVLQGEKKVEVIGKLHE 385 Query: 380 QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 LL+ D + ++ E+ + R ++ R+G E K Sbjct: 386 ILRPFLLRRLKVDVVEEMVSKTEIF-VYCSMTPMQREYYQMIRDG-TLAKAMEEKYGKFQ 443 Query: 440 LPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT 499 + T + +M RK + + ++ L L Sbjct: 444 AQKAFNTTTLRNKMMQLRKCCLHPY--LFDEPLTAGGDVVTDERMIETSGKLSILDRMLR 501 Query: 500 SHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA------ 551 + KVL+ LE R RE +++R F Sbjct: 502 QLKRKGHKVLIFSQMTRMMDILEDYFRMRE-YSYCRLDGSTKLMDRVDQMEKFNKVSAGS 560 Query: 552 ----EEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 ++D +L + G G N A ++ +D +NP Q + R RIGQ ++I Sbjct: 561 GSANDDDNVFVFMLSTRAGGLGINLIAADTVIFYDSDWNPQQDNQAMDRCHRIGQKNEII 620 Query: 608 IHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLI 667 ++ E + + + + E G ++ +DL+ Sbjct: 621 VYRLVTENSFEDRMTQRAFEKRKLERVVIQRG-----GFKERTTPAESAKLTNTELEDLL 675 Query: 668 KNCREQHEALK------AQLEQGRDRLLEIHSNGGEKAQALAES 705 ++ E + ++ +L Q DR L + S + A++ Sbjct: 676 RDDVEIRQGVESGGITDDELNQILDRELVVKSFVKTSKEENAKA 719 >UniRef50_Q04692 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 n=10 Tax=Amniota RepID=SMRCD_MOUSE Length = 1021 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 99/544 (18%), Positives = 198/544 (36%), Gaps = 43/544 (7%) Query: 146 GLRGQRTSLIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERV 203 L Q SL P+Q + + +H +LADE+GLGKTI+A L G Sbjct: 484 SLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNKGPH 543 Query: 204 LIIVPETLQHQWLVEMLRRF-NLRFALFDDERYAEAQH--DAYNPFDTEQLVICSLDFAR 260 LI+VP + WL E+ +L + + Q + +N ++ +++ + + A Sbjct: 544 LIVVPASTIDNWLREVNLWCPSLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYNCAI 603 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG 320 S + + + DE H L ++ S YQ + + + LLLT TP Q Sbjct: 604 SSSDDRSLFRRLKLNYAIFDEGHML---KNMGSIRYQHLMTI--NARNRLLLTGTPVQNN 658 Query: 321 MESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 + + L + P+ F + + + + ++++ ++ I + Sbjct: 659 LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAH-AKQIIKPFILRR 717 Query: 381 DIEPLLQAANSDSEDAQSA-----RQELVSMLMDRHGTS-RVLFRNTRNGVKGFPKRELH 434 E +L+ + + +++L S L +R S L +NT R++ Sbjct: 718 VKEEVLKLLPPKKDRIELCAMSEKQEQLYSGLFNRLKKSINNLEKNTEMCNVMMQLRKMA 777 Query: 435 TIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE---------------- 478 L QY T K+ + ++ ++ P+ I+++ E Sbjct: 778 NHPLLHR-QYYTPEKLKEM--SQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYQH 834 Query: 479 ----GDNATWWNFDPRVEWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGIRAA 532 + + L L+ + +V++ L + +VL + R Sbjct: 835 INSYQLDMDLILDSGKFRALGCILSELKQKGDRVVLFSQF-TMMLDILEVLLKHHQHRYL 893 Query: 533 VFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQ 592 I ER F + LL ++ G G N A+ +++ D+ NP +Q Sbjct: 894 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ 953 Query: 593 RIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLIN 652 R R+GQ ++ + + T + +++ + L + S+ D+ Sbjct: 954 AEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEADEGSMPADIAT 1013 Query: 653 YLAS 656 L + Sbjct: 1014 LLKT 1017 >UniRef50_A8KX63 Non-specific serine/threonine protein kinase n=3 Tax=Actinomycetales RepID=A8KX63_FRASN Length = 617 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 112/592 (18%), Positives = 206/592 (34%), Gaps = 86/592 (14%) Query: 98 REVFLDSKLVFSKPQDRLFAGQIDRMDRFALRY------------------RARKYSSEQ 139 + + + + RL G + R R Q Sbjct: 78 PRAEVGASVRAWRDAVRLLDGDDEEFGRLGARMPPAAHAVLNAEGTAITTASTLLAQFRQ 137 Query: 140 FRMPYSGLRGQRT--SLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQL 195 + LRG L P+Q++ + R +LADE+GLGKT++A +L Sbjct: 138 TLATRAALRGAVVTAELRPYQVHGVAWLSARPGLGYGGVLADEMGLGKTLQAICMLATCR 197 Query: 196 LSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICS 255 L++ P +L W E+ RF + A + + P +V+ S Sbjct: 198 SD---MPHLVVCPTSLIGNWRRELA-RFAPTTPVISYHGAARKLPETFQP---GTVVVTS 250 Query: 256 LDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTAT 315 R+ E L W ++++DEA + ++ + +A QL+ V + +T T Sbjct: 251 YPVLRKD----EPLAATAWGVVILDEAQQI---KNPEALASRAAAQLSATV--RIAMTGT 301 Query: 316 PEQLGMESHFARLRLLDPNRFHDFAQFVE------EQKNYRPVADAVAMLLAGNKLSNDE 369 P + +E ++ L + +P +F + EQ+ A A+ ++ + L + Sbjct: 302 PVENRLEELWSILNVSNPGLLGTRGRFRQRFVVPIEQRRSATAAAALNRMVRPHLLRRTK 361 Query: 370 LNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFP 429 + ++ +Q + A+ + L +DR T Sbjct: 362 AEVAADLPPKQYSTIVCTMADEQA--------RLYREAVDRAFT---------------- 397 Query: 430 KRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDP 489 I+ SG + A +A + +P + +E FD Sbjct: 398 ------------EGLGAGIERSGRVLALLTAL--KQICNHPAQYLREDTATPGRSGKFDR 443 Query: 490 RVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIR-AAVFHEGMSIIERDRAAA 548 E L + +VLV A L + L G+ H G+S+ RD Sbjct: 444 ATEMLSEVVEQ--DDRVLVFTQYRAMGKLLSRYLGTALGVGLVPFLHGGLSMQRRDELVH 501 Query: 549 WFAEEDTGAQVLL-CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 F E+D VLL G N ASH++ +D +NP + EQ R RIGQ+ + Sbjct: 502 AFQEDDDAPPVLLLSLRAAGFGLNLTRASHVMHYDRWWNPAVEEQATDRAHRIGQSRTLN 561 Query: 608 IHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQ 659 ++ T + + + + E + + +D ++ + + D+ Sbjct: 562 VYTLVTGGTIEDHIAQMHENKRGVAEIVSGDTQAALAKLSDDDLHAVLALDE 613 >UniRef50_A9VAE6 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VAE6_MONBE Length = 1288 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 103/566 (18%), Positives = 201/566 (35%), Gaps = 29/566 (5%) Query: 154 LIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPET 210 L P+Q+ + + R+ +LADE+GLGKTI+ +L + + L+IVP Sbjct: 453 LKPYQMYGLRWLVSLYNNRINGILADEMGLGKTIQTIALLTYLVEKKNNSGPFLVIVPLA 512 Query: 211 LQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHL 269 W +E+ + +L + + +++ + + + + L Sbjct: 513 TLSNWRLELAKWAPSLVTVAYRGNKVERRVFHQQIKDVRFNVLLTTYEMIIKDRALLSKA 572 Query: 270 C-EAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 C W +++DE H + S++ S+ P LLLT TP Q + ++ L Sbjct: 573 CFNISWRYMIIDEGHRMKNSKNKLSQTLMHYFS----APRRLLLTGTPLQNSLPELWSLL 628 Query: 329 RLLDPNRFHDFAQFVEEQKN-YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQ 387 + P+ F+ F + ++ V + +L +L+ + + ++ ++ Sbjct: 629 NFILPDVFNSSDTFDSWFSAPFAETSENVELDAEEKQLIILQLHKILRPFLLRRLKKEVE 688 Query: 388 AANSDSED-----AQSARQELVSMLMDRHGTSRVLFRNT----RNGVKGFPKRELHTIKL 438 D + SA Q + + M ++G ++T + R L + + Sbjct: 689 TQLPDKVEHVIKCEMSALQRKLYVCMQKYGVIPSSTQSTSGSNMEALDATKARSLQNVVM 748 Query: 439 PLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYL 498 + + KS R + + + W ++E L + Sbjct: 749 QMRKLCCHPFLFKEVEQDLKSELLR-----HEDAATALANLNGLELWRTAGKLELLDHMI 803 Query: 499 TSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTG 556 R ++L+ LE R R ++ +R F D+ Sbjct: 804 PKLRRFGHRILLFSQFTTMLDILEDYFRYRR-LKYCRMDGTCGAAKRAELLHDFNAPDSD 862 Query: 557 AQVLL-CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEK 615 ++ + + G G N Q A +V+FD +NP Q R RIGQ ++++ + Sbjct: 863 LEIFILSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQTKEVRVFRLVTVQ 922 Query: 616 TAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS-PDQTEGFDDLIKNCREQH 674 + + ++ E LD + G+ + ND L Q DD I+ H Sbjct: 923 SVEERMLERAREKLDVDQQVIQAGKFNQTADENDTKKMLLEIIQQANDDDDEIEAGVTDH 982 Query: 675 EALKAQLEQGRDRLLEIHSNGGEKAQ 700 E L L + + L E A Sbjct: 983 EDLNRMLARSDEELEAFVQMDEEIAN 1008 >UniRef50_D1HIU5 Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=5 Tax=Magnoliophyta RepID=D1HIU5_VITVI Length = 1356 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 115/626 (18%), Positives = 223/626 (35%), Gaps = 86/626 (13%) Query: 133 RKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVGLGKTIEAGMI 190 ++ +QF L G SL P+QL + + V+LADE+GLGKTI++ Sbjct: 267 KQREFQQFEHSPEFLSGG--SLHPYQLEGLNFLRFSWGKQTHVILADEMGLGKTIQSIAF 324 Query: 191 LHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFD-- 247 L L++ P + W E + ++ +A + Y + Sbjct: 325 LASLFEEN-VSPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSSHARSVIRDYEFYFPK 383 Query: 248 ----------------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHL 285 +++ S + L +W+ ++VDE H L Sbjct: 384 SHKKIKKKKSGQIVTESKQDRIKFDVLLTSYEMINLDSA---SLKPIKWECMIVDEGHRL 440 Query: 286 VWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEE 345 ++ S+ + +++Q +LLT TP Q ++ F + LD +F +F EE Sbjct: 441 ---KNKDSKLFLSLKQYL--SKHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEE 495 Query: 346 QK--NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQEL 403 K N + +LA + L + +++ E+ ++++ ++ ++ E ++ Sbjct: 496 FKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRN 555 Query: 404 VSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDR 463 +L R G L N V K H L G ED Sbjct: 556 YQILTRRGGAQISLI----NVVMELRKLCCHPYMLE---------------GVEPDIEDA 596 Query: 464 ARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVL 523 Y+ + D + L + +VL+ LE Sbjct: 597 T-------EAYKLLLESSGKLQLLDKMMVKLKE-----QGHRVLIYSQFQHMLDLLEDYC 644 Query: 524 REREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFD 582 ++ + + ER F +++ LL + G G N A ++++D Sbjct: 645 TYKK-WQYERIDGKVGGAERQVRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYD 703 Query: 583 LPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP--TGR 640 +NP Q + R R+GQ + + I+ T + +++ + + + Sbjct: 704 SDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQ 763 Query: 641 TIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 I +D+I Y + + D+ K+ + ++ DRLL+ G E+A Sbjct: 764 NINQEELDDIIRYGSKELFADENDEAGKSRQIHYDDAA------IDRLLDREQVGDEEA- 816 Query: 701 ALAESIEEQDDDTNLIAFAMNLFDII 726 ++++ +DD L AF + F+ I Sbjct: 817 ----TLDDDEDDGFLKAFKVANFEYI 838 >UniRef50_Q256C0 Swi/snf family helicase 2 n=17 Tax=Chlamydiales RepID=Q256C0_CHLFF Length = 1165 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 87/507 (17%), Positives = 186/507 (36%), Gaps = 44/507 (8%) Query: 151 RTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVP 208 + +L +Q H + R+ +LAD++GLGKT++A + + Q L LI+ P Sbjct: 698 QATLRSYQTEGIHWLERLRKMHLNGILADDMGLGKTLQAIIAITQSKLEKGKGCSLIVCP 757 Query: 209 ETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEH 268 +L + W E R+FN F + + + I S + ++ + Sbjct: 758 TSLVYNWKEEF-RKFNPEFKTMIVDGVPSYRRRQLADLSDYDVAITSYNLLQKDIDIYKD 816 Query: 269 LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 +D +V+DEAHH+ ++ +R ++++ + L+LT TP + +E ++ Sbjct: 817 FV---FDYVVLDEAHHI---KNRTTRNAKSVKMI--RSGHRLILTGTPIENSLEELWSLF 868 Query: 329 RLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQA 388 L P + +FV + + GN + N NM+ + ++ +L+ Sbjct: 869 DFLMPGLLSSYDRFVGKY------------IRTGNYMGNKTDNMIA--LKKKVAPFILRR 914 Query: 389 ANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAI 448 D + E++ + R L+ + K R + Sbjct: 915 MKEDVLEDLPPVSEILYHCH-LTESQRELYHSYAASAKKELSRLVKQE------------ 961 Query: 449 KVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV 508 I + R + + I+ + + +D ++ L + + K ++ Sbjct: 962 GFDRIHIHVLATLTRLKQICCHPAIFAKDVPEPGDSAKYDLLMDLLSSLVET--GHKTVL 1019 Query: 509 ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSE 568 +++ L E G+R S R F E+ L+ + G Sbjct: 1020 FSQYTKMLSIIKKDL-EASGVRFVYLDG--STKNRLELVNQFNEDPGLLVFLISLKAGGT 1076 Query: 569 GRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEG 628 G N A ++ +D+ +NP + Q R+ RIGQ + + T + ++ + Sbjct: 1077 GLNLVGADTVIHYDMWWNPAVENQATDRVHRIGQNRSVSSYKLVTLNTIEEKILTLQNRK 1136 Query: 629 LDAFEHTCPTGRTIYDSV-YNDLINYL 654 + + + + + +++ L Sbjct: 1137 KSLVKKVINSDDEVVSKLTWEEVLELL 1163 >UniRef50_C4LW36 Chromodomain-helicase-DNA-binding protein, putative n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4LW36_ENTHI Length = 1262 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 108/609 (17%), Positives = 200/609 (32%), Gaps = 78/609 (12%) Query: 151 RTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLS-GAAERVLIIV 207 + L +Q+ + + V+LADE+GLGKT++ + + L+IV Sbjct: 366 KNKLRDYQIEGVNWITYAFSQNTNVILADEMGLGKTVQTITFIRHLYDNYNIIGPFLVIV 425 Query: 208 PETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFD------TEQLVICSLDFAR 260 P + W E + L ++ + + A F +++ S + Sbjct: 426 PLSTISNWSKEFNKWAPKLNCVVYTGDGESRAIIRKTEMFGNKKGTIKFNVLLTSFELVI 485 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG 320 + + W VVDEAH L ++ + Y+ + + LL+T TP Q Sbjct: 486 KDQDVFNQF---HWKYTVVDEAHRL---KNNEGQLYEVLMR--TTTENKLLITGTPLQNT 537 Query: 321 MESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 ++ ++ L L P +F F +F + V + N+L L + + + E+ Sbjct: 538 LKELWSLLHFLHPKKFISFEEFEKTYS----VEGTEEINKIHNELKPYLLRRMKKDV-EK 592 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPL 440 + P + + +++ ++ ++ S L + + K L I + L Sbjct: 593 SLPPKKERILRV--ELSPIQKQYYRWIITKN--SDALKKAVQQ-----QKTSLMNICMEL 643 Query: 441 PTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS 500 I ++ +M + E + Q E Sbjct: 644 KKLCNHPILINELMNSE-----------NEENLIQSCGKMILLDKLLVKLKET------- 685 Query: 501 HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDT-GAQV 559 +VL+ L L R G M R RA F +D+ Sbjct: 686 --GHRVLIFSQMVRMLDVLSNYLHFR-GFNYQRLDGAMGREARQRAMDHFNAKDSTDFVF 742 Query: 560 LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS 619 LL + G G N A ++++D +NP Q R RIGQ + I+ E T + Sbjct: 743 LLSTRAGGLGINLTTADTVIIYDSDWNPQNDLQAQARCHRIGQEKTVNIYRLATEGTIEE 802 Query: 620 VLVRWYHEGL---DAFEHTCP-----TGRTIYDSVY---------NDLINYLASPDQTEG 662 ++ + L T G ++D D+ N + Sbjct: 803 KILLSAKKKLVLDHLIIQTMEKKGKKNGNELFDKSELQKILQFGAQDIFNKDNGERKEVN 862 Query: 663 FDDLIKNCREQHEALKAQLEQGRDRLLEIH-----SNGGEKAQALAESIEEQDDDTNLIA 717 D++++ R E K + D L + +GG S+ Q D Sbjct: 863 IDEILE--RADVEEGKEESSGVNDLLGAFNVENFAISGGNNVNEFWNSVITQQDKEEARK 920 Query: 718 FAMNLFDII 726 + +I Sbjct: 921 LDEQILGVI 929 >UniRef50_Q5NA48 Os01g0881000 protein n=3 Tax=Oryza sativa RepID=Q5NA48_ORYSJ Length = 1150 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 99/520 (19%), Positives = 193/520 (37%), Gaps = 59/520 (11%) Query: 131 RARKYSSEQFRMPYSGLRGQRTS------LIPHQLNIAHDVGRRHAPR--VLLADEVGLG 182 R K +S++ + + L G + L +QL + R V+LADE+GLG Sbjct: 505 RRHKNASKRVNISQTCLDGSKIEEVHCGALYDYQLQGLQWLIDNFKTRRSVILADEMGLG 564 Query: 183 KTIEAGMILHQQLLSGA-AERVLIIVPETLQHQWLVEMLRRF-NLRFALFDDERYAEAQH 240 KT++ L+ + A LI+ P+++ QW E + +L ++ +R + Sbjct: 565 KTVQVVCFLYHIIKESLTASPALILAPKSILLQWEKEFCQWASDLNVIVYQGDRDSRKCI 624 Query: 241 DAYNPFDT-----EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 + + + ++ S +F + K L+ +W +V+DEAH + + Sbjct: 625 QVHEMYSSDGKPLFDALVTSYEFVQIDKAVLQKF---KWSTIVIDEAHRM---KKLDCNL 678 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQ---FVEEQKNYRPV 352 +++ LLLT TP Q + F+ L +DP+ F D F + Sbjct: 679 AACLKRYC--SEFRLLLTGTPLQNNIMELFSLLHYIDPDEFSDPKADGLFSPIESGRDLT 736 Query: 353 ADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHG 412 D + M +++ D P+ + A S R+ +++L + Sbjct: 737 MDEKVARIHNILKPRMLRRMKSDVLT--DSMPVKKWVEVPCALADSQRELYINILERNYS 794 Query: 413 TSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPER 472 RN R K L+ I + L + G+ +++ ED ++ Sbjct: 795 KLNSAIRNGR-------KLSLNNILMELRKCCNHPV---GLEVGQQATEDVFLSLI---- 840 Query: 473 IYQEFEGDNATWWNFDPRVEWLMGYLT--SHRSQKVLVICAKAATALQLEQVLREREGIR 530 +++ L L R +VL+ LE L G + Sbjct: 841 -------------ASSGKLQLLHKLLPRLKERGNRVLIFSQMTRMLDILEDFLCS-LGYK 886 Query: 531 AAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDL 589 A S+ R + + D+ + L+ + G G + A ++++D FNP + Sbjct: 887 YARIDGQTSLSARQESIEEYKNIDSETFIFLMSTRAGGMGVDLPGADRVIIYDPDFNPFM 946 Query: 590 LEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGL 629 Q R RIGQ + ++ + + + +++ + L Sbjct: 947 DLQAQSRAHRIGQTRPVVVYQLITKCSVEEKILQKSKQKL 986 >UniRef50_A8PYR2 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PYR2_MALGO Length = 872 Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 99/554 (17%), Positives = 192/554 (34%), Gaps = 47/554 (8%) Query: 157 HQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSG-AAERVLIIVPETLQH 213 +QL + + +LADE+GLGKT + L + LI+ P ++ Sbjct: 332 YQLTGLSWLNLLYQKNTSCILADEMGLGKTCQVIAFLAHLKENNKRRGPHLIVSPSSVLE 391 Query: 214 QWLVEMLRRF-NLRFALFDDERYAEAQ-HDAYNPFDTEQLVICSLDFARRSKQRLEHLCE 271 W E+ R NLR ++ + D +++ + D A S L + Sbjct: 392 NWAREIQRFCPNLRMEVYYGSQAERRDLRAELKGRDDYDVLLTTYDMATGSHDDHTFLRK 451 Query: 272 AEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLL 331 +D+ V DE H L ++ S++Y + +++ LLLT TP Q ++ + L + Sbjct: 452 RGFDVCVFDEGHML---KNRKSQKYAKLLRISGR--WRLLLTGTPLQNNLQELVSLLNFI 506 Query: 332 DPNRFHDFAQ-----FVEEQKN-----YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQD 381 P+ F D + F +Q + + ++ L + +L + + + Sbjct: 507 LPDYFTDAEEALVAIFKVKQGAGTTQLSQQRVERAKRMMQPFVLRRRKDQVLRGLTEKTE 566 Query: 382 IEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLP 441 + + ++ + Q + L + R R+T N + R+ L Sbjct: 567 RNVMCEMTERQAQIYKDVLQRTKAALAEEPKGKRGTNRDTANVLMDL--RKAANHPLLFR 624 Query: 442 TQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ-----EFEGDNATW------------ 484 T Y + + E ++ + + E +W Sbjct: 625 TLYDEKKIAALARDYVREPEHAEENLQHLREDFTINTDAELSLLARSWKSTRRHVLPESE 684 Query: 485 WNFDPRVEWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 W +++ L + R ++L+ + L + V E G++ F ++ + Sbjct: 685 WMNSGKIQQLRKIIDEVVERRDRMLIFSQF-TSVLDILCVCLEHMGVKYVGFTGQTNVGD 743 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 R F + T LL + G G N A+ +V+FD FNP +Q R RIGQ Sbjct: 744 RQVLVDKFTSDPTIPVFLLSTRAGGLGINLVAANWVVLFDQDFNPQNDKQATDRCYRIGQ 803 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG 662 + + T ++ H L+ + + + S + Sbjct: 804 TKPVTVVRLISRGTIDEDILALAHRKLELADRVSGQAAEVEGD-----EEQMESDIKGRI 858 Query: 663 FDDLIKNCREQHEA 676 L+ RE+ Sbjct: 859 ASSLLAQVRERSTQ 872 >UniRef50_Q8PWU7 SWF/SNF family helicase n=4 Tax=cellular organisms RepID=Q8PWU7_METMA Length = 1089 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 97/541 (17%), Positives = 186/541 (34%), Gaps = 74/541 (13%) Query: 154 LIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLL--------------- 196 L P+Q + R+ LAD++GLGKT++ ++ L Sbjct: 590 LRPYQFRGYSWLAFLRQWGIGACLADDMGLGKTVQTLALIQHDLEQAKEKAEEKIEEPAE 649 Query: 197 ---------SGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD 247 A + VL++ P ++ + W E R + + + + Sbjct: 650 EKIEEKVDGRKAPKPVLLVCPTSVINNWKKEASRFTPELSVMVHHGTSRKKEEEFKKEAM 709 Query: 248 TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVP 307 +VI S +R L+ L E W +V+DEA ++ ++ +++ +A L Sbjct: 710 NHAIVISSYGLVQRD---LKFLKEVHWAGVVLDEAQNI---KNPETKQAKAARAL--ESD 761 Query: 308 GVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSN 367 L LT TP + + ++ + L+P A F + + Sbjct: 762 YRLALTGTPVENNVGDLWSIMEFLNPGFLGSQAGFKRNF-----------FIPIQAERDQ 810 Query: 368 DELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM-DRHGTSRVLFRNTRNGVK 426 + L E+ G + L + S+ + + L ++ + + R ++ Sbjct: 811 EAARRLKEITGPFILRRLKTDTSIISDLPEKMEMKTYCTLTKEQASLYAAVLEDIREAIE 870 Query: 427 GFPKR-ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWW 485 G + + I L ++ + +F DN+T Sbjct: 871 GAEEGIQRKGIILSALSRLKQVCNHPA-----------------------QFLKDNSTIP 907 Query: 486 NFDPRVEWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIER 543 ++ L L +K LV A +++ L+ G H G+ +R Sbjct: 908 GRSGKLARLTEMLDVVLENGEKALVFTQFAEMGKMVKEHLQASFGCEVLFLHGGVPRKQR 967 Query: 544 DRAAAWFAEEDTGAQVL-LCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 DR F E + L + G G N A+H+ FD +NP + Q R RIGQ Sbjct: 968 DRMLERFQEGKEYLPIFVLSLKAGGTGLNLTGANHVFHFDRWWNPAVENQATDRAFRIGQ 1027 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVY-NDLINYLASPDQTE 661 ++++H T + + + E+ TG + ++L + LA ++ Sbjct: 1028 KKNVEVHKFICAGTLEEKIDEIIERKVQVAENVVGTGEDWLTELSNDELKDILALREEAV 1087 Query: 662 G 662 G Sbjct: 1088 G 1088 >UniRef50_Q8TDI0 Chromodomain-helicase-DNA-binding protein 5 n=58 Tax=Eumetazoa RepID=CHD5_HUMAN Length = 1954 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 95/506 (18%), Positives = 168/506 (33%), Gaps = 69/506 (13%) Query: 154 LIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLLSG-AAERVLIIVPET 210 L P+QL + + A +LADE+GLGKT++ + L+ G + L+ P + Sbjct: 700 LHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLS 759 Query: 211 LQHQWLVEMLRRFNLRFALFDDERYAEAQ---------------HDAYNPFD-------T 248 W E + F + E++ F Sbjct: 760 TIINWEREF-EMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIK 818 Query: 249 EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPG 308 +++ S + + L EW LVVDEAH L ++ S+ ++ + + + Sbjct: 819 FHVLLTSYELITIDQAI---LGSIEWACLVVDEAHRL---KNNQSKFFRVLN--SYKIDY 870 Query: 309 VLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY--RPVADAVAMLLAGNKLS 366 LLLT TP Q +E F L L P RF++ F+EE + + LL + L Sbjct: 871 KLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLR 930 Query: 367 NDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVK 426 + ++ M + ++ ++ + + + L N Sbjct: 931 RLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL---------------NSKG 975 Query: 427 GFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWN 486 G + L I + L + D ++ Sbjct: 976 GGNQVSLLNIMMDLKKCCNHPYLFP--------------VAAVEAPVLPNGSYDGSSLVK 1021 Query: 487 FDPRVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERD 544 ++ L L R + +VL+ LE L E EG + G++ R Sbjct: 1022 SSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL-EYEGYKYERIDGGITGGLRQ 1080 Query: 545 RAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 A F LL + G G N A ++++D +NP Q R RIGQ Sbjct: 1081 EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN 1140 Query: 604 HDIQIHVPYLEKTAQSVLVRWYHEGL 629 + I+ + + + + + Sbjct: 1141 KKVMIYRFVTRASVEERITQVAKRKM 1166 >UniRef50_C9RKU0 SNF2-related protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKU0_FIBSS Length = 1284 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 101/585 (17%), Positives = 211/585 (36%), Gaps = 45/585 (7%) Query: 93 SGVALREVFLDSKLVFSKPQDRLFAGQIDR-----MDRFALRYRARKYSSEQFRMPYSGL 147 S + E ++ +K F G+ D F ++ A + +E +P Sbjct: 726 STDEILEEDSAPEITQAKLVQACFTGECDNIPVEMASDFKQQFDAWRAETE---IPLP-- 780 Query: 148 RGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLLSGA--AERV 203 +L P+Q+ + + +LAD++GLGKT++ L + G ++ Sbjct: 781 ENLNATLRPYQMRGYSWMYKNLEIGFGCILADDMGLGKTLQVITFLLKMKQEGKFAEKKA 840 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSK 263 ++++P L W VE+ ++F F + +++ + R+ Sbjct: 841 IVVMPAGLLCNWQVEI-KKFAPELTFFAYHGGRRDLQKF-----SADVLLTTYATFRKD- 893 Query: 264 QRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMES 323 L + EW +++DEA ++ ++A S + + + ++ P + ++ TP + + Sbjct: 894 --FAELDKHEWQTIIIDEAQNI---KNADSEQSKLLRRM--RAPMKIAMSGTPVENRLME 946 Query: 324 HFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIE 383 + + + F ++F E+ + P+ ++A ML + ++ I Sbjct: 947 FWTIMDFANHGFFPSASEFREKFET--PIQKNGNQVVAETFRKITAPFMLRRLKTDKSII 1004 Query: 384 PLLQAANSDSEDAQSAR------QELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIK 437 L E A+ R Q+ + M + L + F ++ + Sbjct: 1005 SDLPDKIIQDEYAELTRSQAALYQKTLEHFMQELEMEQALSEKANDAHALFKRKGII--- 1061 Query: 438 LPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGY 497 L + + +A P E + +++ L+ Sbjct: 1062 LQMILALKQICNHPATFLKGLAATSAQDAAEVP----TESAAPQKSNKLESGKMQMLLDL 1117 Query: 498 LTS--HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDT 555 LTS + +K L+ A L+ + G+R +H G + +R F E Sbjct: 1118 LTSIQEQGEKTLIFTQFAEMGHLLKSTIESELGLRTHFYHGGCTQTQRSEMIQDFQENPD 1177 Query: 556 GAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEK 615 ++L + G G N AS ++ +DL +NP + Q R RIGQ ++Q+H + Sbjct: 1178 CKVLILSLKAGGTGLNLVAASQVIHYDLWWNPAIEAQATDRAFRIGQKRNVQVHRFITKG 1237 Query: 616 TAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT 660 T + + T G T + + + + D T Sbjct: 1238 TFEEKINALLETKKAIANLTVNAGETWLADMDDKQLAEVFCLDNT 1282 >UniRef50_UPI000186EE6A DNA repair and recombination protein RAD54B, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186EE6A Length = 840 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 109/544 (20%), Positives = 197/544 (36%), Gaps = 81/544 (14%) Query: 154 LIPHQLNIAHDVGRR-------HAPRVLLADEVGLGKTIEAGMILHQQLLSGA------A 200 L HQL + + V+LADE+GLGKT++ ++ L G Sbjct: 252 LRQHQLEGIIFLYESIMGYKDINYNGVILADEMGLGKTLQCISLIWTLLKQGPYNKKPVI 311 Query: 201 ERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFAR 260 +RVLI+ P +L W E ++ R + Y Q + + +VI S + Sbjct: 312 KRVLIVTPTSLIMNWYNEFIKWLG-RVKIVP---YVVNQKNKPSEIKYHSVVIISYEMLI 367 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG 320 R + ++ E DLLV DEAH + +++ + Q + QL + +LLT TP Q Sbjct: 368 R---CVNNVMEHNVDLLVCDEAHRI---KNSNIKTAQVLNQL--NCKKKILLTGTPLQND 419 Query: 321 MESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 ++ + + +PN +QF Q Sbjct: 420 LQELYTLIDFANPNILGSPSQF-----------------------------------RIQ 444 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGF-PKRELHT--IK 437 +P++ + DS + + S+ + + ++ L R TRN +K + P R K Sbjct: 445 FADPIIASRQPDSNEDVVKKGNERSINLKK-IINKFLLRRTRNILKNYLPPRHDIVVFCK 503 Query: 438 LPLPTQYQTAIKVSGIMGARKSAE------------DRARDMLYPERIYQEFEGDNATWW 485 + P + V+ + A++S E + YP + ++ Sbjct: 504 ITEPQRNMYNSLVNSFLNAKESEEFIEGSSHLELITSLKKICNYPSLLNKDDNYLEKIDI 563 Query: 486 NFDPRVEWLMGYLTSHR----SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSII 541 + +++ + +L + +KVL++ T LE+V Sbjct: 564 DTSGKLKVTVNFLKELQMTSVKEKVLIVSNATQTLNLLEKVFHV-LNYSTCRLDGNTPSA 622 Query: 542 ERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 +R++ F LL S+ G G N AS +++FD +NP Q I R+ R G Sbjct: 623 QRNKIVEDFNTSRDLFIFLLSSKAGGVGLNVTGASRLILFDSDWNPATDLQAISRIWRDG 682 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 Q + I+ T + + + E T + + + L P + + Sbjct: 683 QKFPVFIYRLLTTGTIEEKIYQRQISKQGLCEGTVDPKSNKSIKLSKEELKELFFPCEEK 742 Query: 662 GFDD 665 D Sbjct: 743 DIKD 746 >UniRef50_B0E0Y6 SNF2 family DNA-dependent ATPase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0E0Y6_LACBS Length = 672 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 104/567 (18%), Positives = 202/567 (35%), Gaps = 65/567 (11%) Query: 154 LIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 L +QL + + R +LADE+GLGKTI+ L G LI+VP + Sbjct: 116 LKEYQLLGVNWLNLLYRRKLSCILADEMGLGKTIQVISFLASMKEQGNKGPHLIVVPSST 175 Query: 212 QHQWLVEMLRRFNLRFAL-----FDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRL 266 W E RF ++ +ER Q +++I + + A+ + Sbjct: 176 LENWCREFA-RFAPSISVQTYYAGKEERSMLRQTLTDTQRLGWEVLITTYNLAQGDDRDR 234 Query: 267 EHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFA 326 + +W+ + DE H L ++ S+ YQ++ + + LLLT TP Q ++ + Sbjct: 235 KFFRRIDWNCCIYDEGHVL---KNFQSQRYQSLLKFGSN--WRLLLTGTPLQNNLQELVS 289 Query: 327 RLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLL 386 + + P++F + + ++ D+ LL+ ++S + M ++ + + L Sbjct: 290 LMNFILPDQFAT--ALGDLRAIFKVKGDSTVSLLSQERISRAKKMMTPFVLRRRKDQVLK 347 Query: 387 QAANS----------------DSEDAQSARQELVS-----------------MLMDRHGT 413 N ++ Q +R+ L+ M + + + Sbjct: 348 DLPNKTERIEWCDMTELQRSIYTDALQRSRKTLLDAPTPADTVYLENSSNVLMDLRKAAS 407 Query: 414 SRVLFRN--TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE 471 +LFR T + + G ++ L +K + + Sbjct: 408 HPMLFRTRFTDDVLSGITRQLLKEPDFKKRGALFDLVKEDMSVMTDAELQIFCASYKSTR 467 Query: 472 RIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQVLREREGI 529 + Q+ +V+ L+ L+++ + KVL+ L+ VL + I Sbjct: 468 KYLQDENCYLDA-----GKVQTLLKLLSTYDREGRKVLIFSQFTQILDILQAVLNNNK-I 521 Query: 530 RAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDL 589 + + + R F E++T LL ++ G G N AS +VMFD FNP Sbjct: 522 KYLILTGSTPVDVRQTLVDEFTEDETIPVFLLSTKAGGMGINLTAASVVVMFDQDFNPHN 581 Query: 590 LEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYND 649 Q R RIGQ D+ + T + +++ L + D Sbjct: 582 DRQAQDRAYRIGQKRDVDVVKLISRGTIEEDMLKLGQTKL-------ALDEAVAGDNGED 634 Query: 650 LINYLASPDQTEGFDDLIKNCREQHEA 676 ++++ E+ + Sbjct: 635 NDESAPEKAMKTSLMNVLRRQFEKQQE 661 >UniRef50_B6H510 Pc13g11770 protein n=2 Tax=Eurotiomycetidae RepID=B6H510_PENCW Length = 834 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 104/600 (17%), Positives = 194/600 (32%), Gaps = 75/600 (12%) Query: 157 HQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQ 214 +QL + + +LADE+GLGKT++A ++ + LI P + Sbjct: 223 YQLEGLEWLKTLWMNGLCGILADEMGLGKTVQAISMIAFLKEKQVSGPFLIAAPLSTVSN 282 Query: 215 WLVEMLRRF-NLRFALFDDERYAEAQHDAYNPFDT------EQLVICSLDFARRSKQRLE 267 W+ E R ++ L+ + A + +V S + ++ Sbjct: 283 WVDEFARWTPGIKTVLYHGSKDERAAMRSKFMKLKNQGDMDFPVVCTSYEICMNDRK--- 339 Query: 268 HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 L + +W +VVDE H L ++ + + + L + LL+T TP Q + ++ Sbjct: 340 FLAQYQWRYIVVDEGHRL---KNMNCKLIKEL--LTYNSANRLLITGTPLQNNISELWSL 394 Query: 328 LRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQ 387 L L P F+D F E ++ V D K + + + ++ LL+ Sbjct: 395 LHFLLPEVFNDLNSF-ESWFDFSSVLDNKGQADLVEKRKRNLVTSMHAILKPF----LLR 449 Query: 388 AANSDSEDAQSARQELV------------------------------SMLMDRHGTSRV- 416 +D E ++E + L + G+S Sbjct: 450 RLKTDVEHTLPKKREYILYAPLTPEQKDLYREIINGTGRQYLEGKALERLESKSGSSTRS 509 Query: 417 --LFRNTRNGVKGFPKRELHTIKLPLPTQY---------QTAIKVSGIMGARKSAEDRAR 465 + R P + + P + ++A K G + Sbjct: 510 QSMKRKRSGSDDATPVKSSRSSGTSTPARNGGTSSRRRRRSAQKEIGHKKMQNPVLQARL 569 Query: 466 DMLYPERIY----QEFEGDNATWWNFDPRVEWLMGYLTS--HRSQKVLVICAKAATALQL 519 P Y E + + + ++ L + + K+L+ + Sbjct: 570 ACNSPHNFYWPWMDESSSVDESLVSASGKMLLLDRLVACLLKKGHKILIFSQFKTQLDII 629 Query: 520 EQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMV 579 E+ ++ ER F + + LL + G +G N A ++ Sbjct: 630 EEWATTLRSWDCCRIDGAIAQSERQAQIKNFNTKKSHKLFLLSTRAGGQGINLTAADTVI 689 Query: 580 MFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTG 639 +FD +NP Q R RIGQ + I+ + T + L+ G Sbjct: 690 IFDSDWNPQQDLQAQDRAHRIGQTKPVIIYRLATKGTVEQTLLEKADSKRRLERLVIQKG 749 Query: 640 RTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKA 699 + L S D E L +N E+ EA + L+I ++ E+A Sbjct: 750 -----KFRSLLDPSANSQDIDELRKALGENEFERFEAGADPASILSNEDLDILTDRSEEA 804 >UniRef50_A5D5A2 Putative uncharacterized protein n=4 Tax=cellular organisms RepID=A5D5A2_PELTS Length = 1256 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 90/514 (17%), Positives = 181/514 (35%), Gaps = 57/514 (11%) Query: 149 GQRTSLIPHQLNIAHDVGRRHAPRVL---LADEVGLGKTIEAG-MILHQQLLSGAAERVL 204 G + L P+Q+ + + R L LAD++GLGKT++ ++L + + L Sbjct: 787 GLKADLRPYQVRGFKWLYY-NTVRGLGSCLADDMGLGKTLQVITLLLKLKEERWLEKPAL 845 Query: 205 IIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSK 263 ++ P TL W+ E R +L+ A++ L+I S RR Sbjct: 846 VVCPTTLIGNWVRECSRFAPSLKAAVYHGSGRRLDTRGT-------DLLITSYGILRRET 898 Query: 264 QRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMES 323 + + + EW L+++DEA ++ ++ S + +A++ LA + ++ TP + + Sbjct: 899 AKFK---KKEWSLVIIDEAQNI---KNPESDQTKAVKSLAAKC--RIAMSGTPVENRLAE 950 Query: 324 HFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIE 383 ++ ++ ++F + D + L + + Sbjct: 951 LWSIFDFINRGYLGSLSEFT-----------GSFAVPIEKYRDPDRIARLKKATAPFLLR 999 Query: 384 PLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQ 443 L + +E L SR R V+ + + Sbjct: 1000 RLKSDRTIIKDLPPKIVKEENCYL------SREQAALYRQVVE------------QVMEE 1041 Query: 444 YQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH-- 501 + + ++ K + +P + + E + L Sbjct: 1042 IEHSEGITRKGLVFKLITSLKQICNHPVH----YSKKGKPAKEHSGKAEKALDLLAQIAA 1097 Query: 502 RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVL- 560 +K L+ L +++RE A FH G+ +RD F E+ A + Sbjct: 1098 AGEKALIFTQYREMGELLVEMIREELQEEALFFHGGLPRQKRDEMVKKFQEDKGAAPFMV 1157 Query: 561 LCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSV 620 + + G G N A+H++ +DL +NP + +Q R RIGQ + +H T + Sbjct: 1158 VSLKAGGTGLNLTAATHVIHYDLWWNPAVEDQATDRTYRIGQTRTVMVHRLISLGTFEEK 1217 Query: 621 LVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYL 654 + + T G + + N+ + L Sbjct: 1218 INTMMASKRELAGLTVAAGESSLSELSNEELRKL 1251 >UniRef50_Q19106 Protein F01G4.1, confirmed by transcript evidence n=4 Tax=Fungi/Metazoa group RepID=Q19106_CAEEL Length = 1474 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 99/582 (17%), Positives = 204/582 (35%), Gaps = 33/582 (5%) Query: 154 LIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPET 210 L P+Q+ + + + +LADE+GLGKTI+ ++ + L+IVP + Sbjct: 533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLS 592 Query: 211 LQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHL 269 W E + ++ ++ + A + + +++ + ++ + K L Sbjct: 593 TLSNWQNEFAKWAPSVTTIIYKGTKDARRRVEGQIRKGAFNVLMTTYEYVIKEKAL---L 649 Query: 270 CEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLR 329 + W +++DE H L ++ + + H LLLT TP Q + +A L Sbjct: 650 GKIRWKYMIIDEGHRL---KNHNCKLTLMLNGF-FHAQHRLLLTGTPLQNKLPELWALLN 705 Query: 330 LLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAA 389 L P+ F F EQ P A + +L+ +E ++ + + LL+ Sbjct: 706 FLLPSIFSSCGTF--EQWFNAPFATTGEKV----ELNQEETMLIIRRLHKVLRPFLLRRL 759 Query: 390 NSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIK 449 + E + E V D+ +V++R+ + G+ + + T + Sbjct: 760 KKEVESQLPDKTEYVIKC-DQSALQKVIYRHMQKGL-----LLDAKMSSGARSLMNTVVH 813 Query: 450 VSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVL 507 + + + ++ E + ++E L L + ++L Sbjct: 814 LRKLCNHPFLFPNIEDSC---RAYWKVNEVNGTDLMRVAGKLELLDRILPKLKATGHRIL 870 Query: 508 VICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIG 566 + + E L R ER F ++ +L + G Sbjct: 871 MFFQMTSMMNIFEDFLNFRR-YTYLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLSTRAG 929 Query: 567 SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYH 626 G N Q A +++FD +NP Q R RIGQ ++++ + + ++ Sbjct: 930 GLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEEKILAAAR 989 Query: 627 EGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNC--REQHEALKAQLEQG 684 L+ E G+ S + L Q +G ++ + E + A+ E+ Sbjct: 990 YKLNVDEKVIQAGKFDQRSTGAERKQMLEQIIQADGEEEEEEEVPDDETVNQMVARSEEE 1049 Query: 685 RDRLLEIHSN-GGEKAQALAESIEEQDDDTNLIAFAMNLFDI 725 + + + E+A L ++ FD Sbjct: 1050 FNIFQSMDIDRRREEANQLHRKPRLLEEHEIPDDILKLSFDY 1091 >UniRef50_Q12873 Chromodomain-helicase-DNA-binding protein 3 n=105 Tax=Eumetazoa RepID=CHD3_HUMAN Length = 2000 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 106/594 (17%), Positives = 198/594 (33%), Gaps = 71/594 (11%) Query: 157 HQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLLSG-AAERVLIIVPETLQH 213 +QL + + A +LADE+GLGKTI+ + L+ G L+ P + Sbjct: 739 YQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTII 798 Query: 214 QWLVEMLRR---FNLRFALFDDERYAEAQHDAYNPFD------------------TEQLV 252 W E F + D + A + + ++ D ++ Sbjct: 799 NWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVL 858 Query: 253 ICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLL 312 + S + + L W LVVDEAH L ++ S+ ++ + + LLL Sbjct: 859 LTSYELITIDQA---ALGSIRWACLVVDEAHRL---KNNQSKFFRVLNG--YKIDHKLLL 910 Query: 313 TATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY--RPVADAVAMLLAGNKLSNDEL 370 T TP Q +E F L L P RF++ F+EE + + LL + L + Sbjct: 911 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKA 970 Query: 371 NMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPK 430 ++ M + ++ ++ + + + L R G ++V N +K Sbjct: 971 DVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLK---- 1026 Query: 431 RELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPR 490 + P + K+ + + Sbjct: 1027 -KCCNHPYLFPVAAMESPKLPSG------------------------AYEGGALIKSSGK 1061 Query: 491 VEWLMGYLTSHRSQ--KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAA 548 + L L + Q +VL+ LE L + EG + G++ R A Sbjct: 1062 LMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFL-DYEGYKYERIDGGITGALRQEAID 1120 Query: 549 WFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 F LL + G G N A +++FD +NP Q R RIGQA+ + Sbjct: 1121 RFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVM 1180 Query: 608 IHVPYLEKTAQSVLVRWYHEGLDAFEHTC--PTGRTIYDSVYNDLINYLASPDQTEGFDD 665 I+ + + + + + G +L + L + D+ Sbjct: 1181 IYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDE 1240 Query: 666 LIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFA 719 +E+ ++ + RLL+ + + E +++ E + + Sbjct: 1241 NEGENKEEDSSVIHYDNEAIARLLDRNQDATEDTD--VQNMNEYLSSFKVAQYV 1292 >UniRef50_O30320 ATP-dependent RNA helicase HepA, putative n=1 Tax=Archaeoglobus fulgidus RepID=O30320_ARCFU Length = 943 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 172/864 (19%), Positives = 340/864 (39%), Gaps = 80/864 (9%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVG----RRHAPRVLLADE 178 F + + ++ P S L + +L+P+QL ++ RVL+A E Sbjct: 3 YPLFRVAVDSYHLFTKYQYDPVSVLAASKINLLPYQLEDFLNLLDIADSGRPVRVLIAYE 62 Query: 179 VGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEA 238 GLGKTI AG+ + + ++ R+LI+ P +Q+QW E+ +F + L EA Sbjct: 63 TGLGKTILAGLFIKEMVIRNPNTRILIVTPPNVQYQWQDELKNKFGMHVPLLT-----EA 117 Query: 239 QHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA 298 +P ++ +I S+D + + L + + WD++VVDE H +R Q Sbjct: 118 DKQGKDPL-KQKWLIASMDTLK-GENWLRRVEDHRWDIVVVDELHRATI----KNRRAQL 171 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNR-FHDFAQFVEEQKNYRPVADAVA 357 I+ L + +L LTATP + RL L++ N ++ +FV++ R D + Sbjct: 172 IQVLRDRTKHMLALTATPHDGKEDQFVFRLSLINRNVDEQNWKEFVKKYTFRRRKRDVLD 231 Query: 358 MLLAGNKLSNDELNMLGEMIGEQ--------DIEPLLQAANSDSEDAQSARQELVSMLMD 409 L G K+ ++ L I ++E +++ +E+ LV+ ++ Sbjct: 232 --LEGRKIFPQKVYPLTIEIEPDEEEKEFYWEVEKYVRSYYKLAEEENKRSIGLVATIVG 289 Query: 410 RHGTSR------VLFRNTRNGVKGFPKRELHTI----KLPLPTQYQTAIKVSGIMGARKS 459 R +S VL R +GF + +L + K+ + Sbjct: 290 RAVSSSINAGVQVLKNRYRRLFEGFAEELEDAEDILDELKQAEEEGDDEKLEKLRMKIIE 349 Query: 460 AEDRARDMLYPERIYQEFE---GDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAA 514 + +D++ E+ E G+ D + E L+ + H + KV++ A Sbjct: 350 SVPVRKDLVEKEKEVLERLITLGEKLLERGRDKKTERLVQVVNEHMEKGNKVIIFTQFLA 409 Query: 515 TALQLEQVLREREGIRAAV-FHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQ 573 T LE+ +E G + V H G++ E+ A + A++L+ ++ E N Q Sbjct: 410 TLDHLERTFKEIYGENSVVTVHGGLTHEEKKNRIAKLWD---SAKILIATDAAGESLNLQ 466 Query: 574 FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFE 633 A+ ++ +++P+NP + QR+GR+ R GQ DI I + ++ + ++ E Sbjct: 467 AANVVIHYEIPWNPVVYIQRVGRVYRYGQEKDIYIQSMLPVFKIERRVLEVILQKVETIE 526 Query: 634 HTCPTGR-TIYDSVYN--DLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLE 690 G I ++ + D+ N + + +D + ++ + K+ L++ R L + Sbjct: 527 KDFDIGSVEIIGTIISERDIENEIWRAYVEDRIEDAGEEVSKKFDKGKSVLQKIRLVLEK 586 Query: 691 IHSNGGE-KAQALAES--IEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHML 747 + +A+ L E I E + +L + + G+ Sbjct: 587 AEAAKKHVRAEKLLEDRGIVEIITEEDLRKYLFYFGEA------KLGEGKF-YDEFTFFE 639 Query: 748 VPDFPGLSEDGIT-ITFDREVALAREDAQFIT-----WEHPLIRNGL---------DLIL 792 + D E +T I + L +D ++ ++P IR L + Sbjct: 640 IKDVRIHPEKILTEIKPSKAEILDLKDVTTLSEKELKLDNPAIRKALYIGMCQRGEAIFS 699 Query: 793 SGDTGSSTISLLKNKALPVGTLLVELIYVVEAQA-PKQLQLNRFLPPTPVRMLLDKNGNN 851 + G I LLK E IY + ++ RFL +L D+ Sbjct: 700 GNEEGYGEIRLLKLFDFYG-----EPIYEIPVVVFNGSIKPFRFLQTLEPVILSDEIEKE 754 Query: 852 LAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEAD 911 L A +E + + ++ + +++ V+ +L + E+ + + + + Sbjct: 755 LTADLESKEIEIRDSSYISEVKEEQRLYLKERVNKVLD-ALSIEEEYYKRFLSDEQAKKK 813 Query: 912 EKLSAELSRLEALRAVNPNIRDDE 935 + E+ + E R++ + R E Sbjct: 814 LQEIQEMKKKEYRRSLRIHDRLSE 837 >UniRef50_A2FNE0 SNF2 family N-terminal domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2FNE0_TRIVA Length = 1366 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 95/562 (16%), Positives = 206/562 (36%), Gaps = 46/562 (8%) Query: 151 RTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQ-LLSGAAERVLIIV 207 + SL +Q+ + + + +L DE+GLGKT + L+ LII Sbjct: 239 KFSLRDYQVIGVNWLRFCYYNKRNSILGDEMGLGKTAQIVSTLNILSKDENINGPFLIIA 298 Query: 208 PETLQHQWLVEMLRRFNLRFALFDDE------------RYAEAQHDAYNPFDTEQLVICS 255 P + W E + NL ++ R + + + F ++I + Sbjct: 299 PLSTLPHWQSEFKKWSNLNSIIYHGSPESLQIINDTEIRVKDDKGKSLKGFVGFDVLITN 358 Query: 256 LDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTAT 315 D + L+ + +W LVVDE H L ++ S Y+ ++ + LLT T Sbjct: 359 YDTVVNQSKELQEI---DWQYLVVDEGHRL---KNRNSLLYKTLQLF--NFVHCTLLTGT 410 Query: 316 PEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY--RPVADAVAMLLAGNKLSNDELNML 373 P Q ++ ++ L +D F+ +F E+ N D + L+ L + ++ Sbjct: 411 PIQNNVDELYSLLSFIDKENFNSSEEFDEKFGNMTNSEQVDELKKLIKPYILRRHKSDVD 470 Query: 374 GEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKREL 433 ++ + + ++ + ++ E +LM + L +N+ P Sbjct: 471 NSILPKTETIIDVELTRQQKKIYKALISENREVLMKK------LTKNS------IPSLNS 518 Query: 434 HTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRV-- 491 +L + IK + + ++ + ++ + + + N ++ Sbjct: 519 LATELRKVCNHPYLIKGAEDSILEEFQNKFDKNSIKSDKNLTKSDIEIEAMINCSGKLIL 578 Query: 492 -EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF 550 + L+ L +++KVL+ LE LR + +R A F Sbjct: 579 IDKLLPKLK-QKNEKVLIFSQWTHILDILEDYLRYIS-FNYERLDGSVKPSDRQTAIDRF 636 Query: 551 AEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610 + L+ ++ G G N AS +++FD +NP Q R RIGQ +++++ Sbjct: 637 KDNANSFVFLISTKAGGVGINLTTASTVILFDSDWNPQNDLQAEARCHRIGQTKEVKVYR 696 Query: 611 PYLEKTAQSVLVRWYHEGL----DAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDL 666 T +S +V + + F+ + +++ + ++ Sbjct: 697 LVTRNTYESKMVEVSCKKMFLEHVIFDGLNSNSDKLSAKEIEEMLRTGINDIFGSDDKEV 756 Query: 667 IKNCREQHEALKAQLEQGRDRL 688 K C + + ++ + +++L Sbjct: 757 DKFCESDIDQILSRPSKIQNKL 778 >UniRef50_Q5WEW1 SNF2 family DNA/RNA helicase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WEW1_BACSK Length = 997 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 91/548 (16%), Positives = 193/548 (35%), Gaps = 46/548 (8%) Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEV 179 +++ +Q P + + +L P+Q + LAD++ Sbjct: 491 QLEWTDELEERLTALYKQQPEPVTMPSALKGTLRPYQKQGLDWLFHLRKVGFGGCLADDM 550 Query: 180 GLGKTIEAGMILHQ---QLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA 236 GLGK+I+ + Q L+I P +L + W E +RF +F Sbjct: 551 GLGKSIQTIAYMLHVQEQQTEQQTTPFLLICPTSLLYNWADEC-KRFAPSLKVFI-HHGQ 608 Query: 237 EAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREY 296 + + LV+ S A R + W+ L++DEA H+ ++ +++ Sbjct: 609 DRLEEGDARLAEADLVLTSYALALRDAR---FFKSVHWNGLILDEAQHI---KNKNTKQR 662 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAV 356 QAI QL+ + LT TP + ++ ++ + LL+P+ FA F + RP+ Sbjct: 663 QAIRQLS--ATHRIALTGTPIENRLQELWSLMDLLNPSLLGSFAGFHKAY--IRPIE--- 715 Query: 357 AMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRV 416 + L +I + + N + Q + + + Sbjct: 716 ------RDHDETKQQALQTLIRPFLLR---RTKNDPATGLQLPNKRETTESVPLSLEQAA 766 Query: 417 LFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQE 476 L++ V + T + ++ + +P + Y++ Sbjct: 767 LYQAVVEDVS---------------ERLATVAHLERKAMILRAITRMKQICNHPAQFYKD 811 Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 + +D ++ + + + + VL+ + L+ R + H Sbjct: 812 GDIAGHQSGKWDAFLDIVASIFS--KGESVLIFTQYKEMGKLISHELQARYEVPVPFLHG 869 Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 G+S +R A F + A +L + G G N A++++ +D +NP + Q R Sbjct: 870 GLSRSQRRMAIEQFQHDPHAAAFVLSLKAGGVGLNLTKATNVIHYDRWWNPAVENQATDR 929 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS 656 RIGQ +Q++ T + + + + E T + + ++L++ + Sbjct: 930 AYRIGQTKPVQVYKLLTAGTVEERIDQLINGKKALAEGVLQTPAFLTELNDDELLSLIQL 989 Query: 657 PDQTEGFD 664 + Sbjct: 990 SHTERSSE 997 >UniRef50_O60264 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 n=154 Tax=Eukaryota RepID=SMCA5_HUMAN Length = 1052 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 105/582 (18%), Positives = 195/582 (33%), Gaps = 64/582 (10%) Query: 154 LIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPET 210 L +Q+ + + + +LADE+GLGKT++ +L +++VP++ Sbjct: 180 LRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKS 239 Query: 211 LQHQWLVEMLRRF-NLRFALF--DDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLE 267 H W+ E R LR D E+ A D P + + S + + K + Sbjct: 240 TLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLP-GEWDVCVTSYEMLIKEKSVFK 298 Query: 268 HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 W LV+DEAH + ++ S+ + + + LLLT TP Q + ++ Sbjct: 299 KF---NWRYLVIDEAHRI---KNEKSKLSEIVREF--KTTNRLLLTGTPLQNNLHELWSL 350 Query: 328 LRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQ 387 L L P+ F+ F + D L E + LL+ Sbjct: 351 LNFLLPDVFNSADDFDSWFDTNNCLGDQ----------------KLVERLHMVLRPFLLR 394 Query: 388 AANSDSEDAQSARQELVSML----MDRHGTSRVLFRNTR--NGVKGFPKRELHTIKLPLP 441 +D E + ++E+ + M R +R+L ++ N K L I + L Sbjct: 395 RIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLR 454 Query: 442 TQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH 501 G D ++ L L Sbjct: 455 KCCNHPYLFDGAEPGPPYTTD-------------------MHLVTNSGKMVVLDKLLPKL 495 Query: 502 RSQ--KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV 559 + Q +VL+ LE R ER + + E ++ V Sbjct: 496 KEQGSRVLIFSQMTRVLDILEDYCMWR-NYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 554 Query: 560 -LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ 618 +L + G G N A ++++D +NP + Q + R RIGQ +++ + T + Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614 Query: 619 SVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIK--NCREQHEA 676 +V L + + D N + G + E Sbjct: 615 ERIVERAEMKLR-LDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDED 673 Query: 677 LKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF 718 + LE+G + E++ + ++ + D ++++ F Sbjct: 674 IDGILERGAKKTAEMNEKLSKMGESSLRNF-TMDTESSVYNF 714 >UniRef50_A9UX01 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UX01_MONBE Length = 827 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 107/557 (19%), Positives = 193/557 (34%), Gaps = 51/557 (9%) Query: 154 LIPHQLNIAHDVGR--------RHAPRVLLADEVGLGKTIEAGMILHQQLLSG-----AA 200 L PHQ V +LAD++GLGKT++ ++ L G Sbjct: 208 LRPHQREGVRFVIECVAGCKSDLEGTGCILADDMGLGKTLQCISVVWTLLKQGFDGKPLC 267 Query: 201 ERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFAR 260 +R LII P +L W E + + + + + + +VI S + Sbjct: 268 QRALIICPGSLVKNWEAEFRKWLGVE-RIKTFAISSANKLEHVQQAKAFPVVIVSYEMYL 326 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG 320 R ++ L + +D+++ DEAH L ++A ++ + + LA + LT TP Q Sbjct: 327 R---CMDLLKQVRFDVVICDEAHRL---KNANAKTTRILSGLA--TRRRIALTGTPVQND 378 Query: 321 MESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 ++ F + ++P F A+F + A A L L I E Sbjct: 379 LQEFFTLVDFVNPGLFGSSAKFKRLYETPIVRARQHDATPAEKDLGEARAEELNRTIHEF 438 Query: 381 DIEPLLQAANSDSEDAQS-----ARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHT 435 + + + L L R ++ + R+ N V+G + L Sbjct: 439 VLRRTKEVNAAYLPPKTDYVVFCQPTPLQLQLYQRLIATQFV-RSCMNAVRGGTRHLLVI 497 Query: 436 IKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDN----ATWWNFDPRV 491 L + ++G A + D R + R+ + ++ T +V Sbjct: 498 AALRM--LCNAPSLLAGRQSANVADSDFDRVLKDVRRLLPGSDDNDVAARTTLLEGSGKV 555 Query: 492 EWLMGYLTSHR---SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAA 548 + L R ++ L++ L + Q+L E EG +R Sbjct: 556 ALVRHMLRQWREKTDERALLVSNS-TRCLDILQLLCEAEGWPFLRLQGSTPTHQRLEMVN 614 Query: 549 WFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 F V L+ S+ G G N AS +V+FD +NP Q + R+ R GQ + Sbjct: 615 RFNARHHDDFVFLMSSKAGGVGLNIVGASRLVLFDTDWNPSHDLQAMARIWREGQTRPVF 674 Query: 608 IHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFD--- 664 I+ T + + + G T+ + + ++ D E F Sbjct: 675 IYRLVATGTIEEKIYQRQIVK-------SALGTTVMED--KETEQAFSTKDLKELFQLHL 725 Query: 665 DLIKNCREQHEALKAQL 681 D+ + K ++ Sbjct: 726 DVASETVQLMRKKKDKI 742 >UniRef50_C1DZK6 SNF2 super family n=2 Tax=Micromonas RepID=C1DZK6_9CHLO Length = 2637 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 107/592 (18%), Positives = 195/592 (32%), Gaps = 33/592 (5%) Query: 154 LIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPET 210 L +QL + R +LADE+GLGKT+++ L L G L+I P + Sbjct: 484 LREYQLEGIRWLVRMFDDGCSCILADEMGLGKTLQSISFLAALRELRGVDGPHLVICPLS 543 Query: 211 LQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPF---DTEQLVICSLDFARRSKQRL 266 + W+ E+ + LR E Q + + + + + A L Sbjct: 544 VLSSWMDELQKWCPKLRVVRLHSTDEGERQRLRKEVVMNVASYDVAVTTYEMACNPTFNL 603 Query: 267 EHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFA 326 + W +++DE H + ++ + + + ++ H LLLT TP Q + +A Sbjct: 604 TLSQKVYWRTMILDEGHKV---KNEDTAAHSVLSRV--HRQHTLLLTGTPVQNNLHELYA 658 Query: 327 RLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLL 386 L L P+ F A F +E + + V + +L + GE ++ Sbjct: 659 ILSFLHPDVFTKSAAF-DEAFDLGTSSHKVDADKLDFAHYLMKPFVLRRVKGEVEVSLPE 717 Query: 387 QAANSDSEDAQSARQELVSMLMDRHGT--SRVLFRNTRNGVKGFPKRELHTIKLPLPTQY 444 + A+ L+ R + + V R G P Sbjct: 718 KTETKIMCPLSPAQTFWYRRLLMRESSALTSVEAAELRKASGGGSGAMDDGGGTDSPEPS 777 Query: 445 QTAIKVSGIMGARKS---AEDRARDMLYPERI----YQEFEGDNATWWNFDPRVEWLMGY 497 K +K + +P E ++ L Sbjct: 778 GAGGKKENAGDFKKLQSLLMQLRKCCNHPYLFAGTDVPEDGVPVEELVEASGKLAVLDRI 837 Query: 498 LTSHRSQ--KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDT 555 L + Q +V++ + L L R G + A + ++R A F ++ Sbjct: 838 LKRLKDQGHRVVLFSQFTSMLDILSDFLTLR-GYQFARLDGSTNRVQRSIDIAAFNRPNS 896 Query: 556 GAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLE 614 LL + G G N Q A V++D +NP + Q + R+ RIGQ + ++ Sbjct: 897 PMFAFLLSTRAGGLGVNLQTADTCVLYDSDWNPQVDTQAMARVHRIGQKKPVHVYRLVTA 956 Query: 615 KTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIK------ 668 T + + + + L E G T + G D + Sbjct: 957 GTVEERMQQRAEKKL-FLEQMVSRGSTKQAENMEGVDKNDLYGMLRFGVDAIFSKDAGEP 1015 Query: 669 NCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 E L + G DR E+ + E +A+ E + + + + + Sbjct: 1016 PTDADLEILMDRTPGGADRRKELANLQSEVQHTVADFAEGKAEAAPISTYVL 1067 >UniRef50_B6AJB2 SNF2 family N-terminal domain-containing protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AJB2_9CRYT Length = 1866 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 98/531 (18%), Positives = 185/531 (34%), Gaps = 74/531 (13%) Query: 149 GQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMIL-HQQLLSGAAERVLI 205 QR L +Q+ + + R V LLADE+GLGKT++ ++ H + L+ Sbjct: 500 NQRKDLRDYQIYGLNWMISRFKKNVNILLADEMGLGKTVQTISVIGHCLYMEKIVAPFLV 559 Query: 206 IVPETLQHQWLVEMLRRF-NLRFALF------------------------DDERYAEAQH 240 +VP++ W+ E + L+ D E + + Sbjct: 560 VVPQSTSDNWIREFKHWLPDANVVLYHGNAQAREIIREYELRKVDIEKIDDKESVLSSDN 619 Query: 241 DAYNPFD---------------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVV 279 D + P+ +VI + S + L + +W +++V Sbjct: 620 DEFVPYSNKKIKGKQGKQKSSHKHLSRYRFDVVITT-PSILNSPVDCDFLRQIDWYMMIV 678 Query: 280 DEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDF 339 DEAH L ++ S+ ++ + + + LLL+ TP +E ++ L L+P +F + Sbjct: 679 DEAHQL---KNRDSKRFKELHEFS--TMYRLLLSGTPLHNNLEELWSLLHFLNPQKFIYY 733 Query: 340 AQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSA 399 +F E D + G+ N+ E+ E +L+ D E + Sbjct: 734 QEFRERY------PDIENPNVIGSSKQQQLENLQNEL-----QEYVLRRVKKDVEKSLPN 782 Query: 400 RQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKS 459 + E + + + VL+++ + K L KV Sbjct: 783 KVERILRI-ELSPQQTVLYKSILTRNYEELSKTTGGTKTSLQNICMELKKVCNHPFLIHR 841 Query: 460 AEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQL 519 E + + P I + D + L + +VL+ + Sbjct: 842 PEVDSSQGITPATIQHQLIYGCGKLCLLDKLLSRLKE-----KGNRVLIFSQMVRMLNII 896 Query: 520 EQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHM 578 + L R G R M R +A F ++ LL ++ G G N A + Sbjct: 897 SEFLILR-GFRHQRLDGTMGKELRKKAMDHFNSPNSDDFCFLLSTKAGGLGINLTTADTV 955 Query: 579 VMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGL 629 +++D +NP Q R RIGQ +QI+ + + + ++ + Sbjct: 956 IIYDSDWNPQNDLQAEARAHRIGQTKQVQIYRLVTKDSIEENILERAKTKM 1006 >UniRef50_C4Y7P0 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y7P0_CLAL4 Length = 1269 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 115/619 (18%), Positives = 224/619 (36%), Gaps = 47/619 (7%) Query: 80 LLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQ 139 LL + LD+ V L++ D + +P D +D + Y+ E+ Sbjct: 432 LLKQTNSFLDSLAKAVKLQQAEADD-IGVEEPTD-----NVDELREKIDYYQVAHRIKEE 485 Query: 140 FRMPYSGLRGQRTSLIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIEAGMILHQQLLS 197 + S L G L +Q+ + + +LADE+GLGKTI++ ++ + Sbjct: 486 VKEQPSILVGG--QLKEYQIKGLQWMVSLYNNKLNGILADEMGLGKTIQSISLITYLIEK 543 Query: 198 GAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSL 256 ++ L+IVP + W VE + +++ ++ + Q+++ + Sbjct: 544 KHEDKFLVIVPLSTITNWTVEFEKWAPSVKVIVYKGSPQQRKELQFEIRTGNFQVMLTTY 603 Query: 257 DFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATP 316 ++ R + L + +++DE H + ++A S+ ++Q L+LT TP Sbjct: 604 EYIIRERPILARFSYSH---MIIDEGHRM---KNAQSKLSITLKQY-YRTKNRLILTGTP 656 Query: 317 EQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEM 376 Q + +A L + P F+ F E + +L+ +E ++ Sbjct: 657 LQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGTQEKI----ELTEEESLLVIRR 712 Query: 377 IGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTI 436 + + LL+ D E + E V + G +L++ F + Sbjct: 713 LHKVLRPFLLRRLKKDVEKDLPDKVEKVLKC-NLSGLQHILYQQMLKHNALFVGSQTTGT 771 Query: 437 --KLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWL 494 K + +++ I E+ D+L RI E W + E L Sbjct: 772 NNKSGIKGLNNKIMQLRKICNHPFVFEE-VEDILNSSRITNELI------WRTSGKFELL 824 Query: 495 MGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAE 552 L + KVL+ + E LR R+ + +R F + Sbjct: 825 DRILPKFKASGHKVLIFFQMTSVMNIFEDFLRLRD-MNYLRLDGSTKAEDRQDMLKSFNK 883 Query: 553 EDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVP 611 ++ LL + G G N Q A +++FD +NP Q R RIGQ ++++I Sbjct: 884 PESDIFCFLLSTRAGGLGLNLQSADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRL 943 Query: 612 YLEKTAQSVLVRWYHEGLDAFEHTCPTGR-------TIYDSVYNDLINYLA----SPDQT 660 + + V++ H+ LD G+ + L++ + + Sbjct: 944 ITNDSVEEVILERAHQKLDIDGKVIQAGKFDNKSTAEEQEEFLKKLLDAEQGENFNEEND 1003 Query: 661 EGFDDLIKNCREQHEALKA 679 DD + + + E K Sbjct: 1004 SLDDDELNDILARSEDEKK 1022 >UniRef50_Q656N0 Putative STH1 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q656N0_ORYSJ Length = 3389 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 102/594 (17%), Positives = 205/594 (34%), Gaps = 48/594 (8%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVG 180 ++ Y+ E S L+G + L +Q+N + + + +LADE+G Sbjct: 987 LESNEKYYQLAHSVKEVVNDQPSYLQGGK--LREYQMNGLRWLVSLYNNNLNGILADEMG 1044 Query: 181 LGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQ 239 LGKT++ +L + L++VP ++ W E+ + YA Sbjct: 1045 LGKTVQVISLLCYLMETKNDRGPFLVVVPSSVLPGWESELNFW----APSINKIAYAGPP 1100 Query: 240 HDAYNPFD------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPS 293 + F +++ + ++ +K L + +W +++DE H + ++A Sbjct: 1101 EERRKLFKEMIVHQKFNVLLTTYEYLM-NKHDRPKLSKIQWHYIIIDEGHRI---KNASC 1156 Query: 294 REYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVA 353 + ++ LLLT TP Q +E +A L L PN F+ F + + Sbjct: 1157 KLNADLKH--YRSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQW---FNKPF 1211 Query: 354 DAVAMLLAGNKLSNDELNMLGEMIGEQDIEP--LLQAANSDSEDAQSARQELVSMLMDRH 411 ++ L ++E N+L Q + P L + + + + LV + Sbjct: 1212 ESNGDSSTEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCWPSAY 1271 Query: 412 GTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE 471 ++L + + G ++ ++ + +M R L+ E Sbjct: 1272 --QKLLIKRVEENLGGIGAVKVRSV-------------HNTVMELRNICNHPYLSQLHVE 1316 Query: 472 RIYQEFEGDNATW-WNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREG 528 I ++E L L + +VL+ +E L ++ Sbjct: 1317 EIEGYLPRHYLPSILRLCGKLEMLDRLLPKLKATGHRVLLFSTMTRLLDVMEDYLVWKK- 1375 Query: 529 IRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNP 587 + S ER F ++ A + LL G G N Q A +++FD +NP Sbjct: 1376 YKYLRLDGHTSGQERGALIDKFNNPNSQAFIFLLSIRAGGVGVNLQAADTVIIFDTDWNP 1435 Query: 588 DLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVY 647 + Q R RIGQ ++ + +T + + L + G ++ Sbjct: 1436 QVDLQAQARAHRIGQKKEVLVLRLETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSA 1495 Query: 648 NDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQA 701 D YL S + ++ + + D + S ++ + Sbjct: 1496 EDRREYLESLLRGGKKEEAAPVLDDDALNDLLA--RSEDEIDIFESIDKQRREE 1547 >UniRef50_A7ARU3 Chromo-helicase DNA-binding protein, putative n=1 Tax=Babesia bovis RepID=A7ARU3_BABBO Length = 1729 Score = 300 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 123/639 (19%), Positives = 219/639 (34%), Gaps = 73/639 (11%) Query: 74 VKEENGLLTYIGTRLD------TEESGVALREVFLDSKL-VFSKPQDRLFAGQIDRMDRF 126 V E++G+ Y+ T E L E D + F + +DR+ +M Sbjct: 637 VDEDSGVDYYMVKWRSCTYDQCTYEDEKVLTEHGFDHLIKSFREREDRICGEMAKKMPWN 696 Query: 127 ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKT 184 K+ + R L +QL + + R VLLADE+GLGKT Sbjct: 697 THSLSLTKFEPYHDTPTFLANHETR-KLRDYQLIGVNWIVNRMKRGLSVLLADEMGLGKT 755 Query: 185 IEAGMIL-HQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDA 242 ++ ++ H G L+IVP++ W+ E + A Sbjct: 756 VQTITLIGHFLYKEGLIGPYLVIVPQSTIDNWMREFETWLPQANVVCYYGNAKAREIIRT 815 Query: 243 YNPFDTE----------QLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAP 292 + + + + + LE L W L+VVDEAH L ++ Sbjct: 816 FELARVHVPGKGERYRCDVCVTT-PSIINAAVDLEFLRRISWQLMVVDEAHQL---KNRN 871 Query: 293 SREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPV 352 S+ + + Q LLL+ TP +E + L ++P + + +F ++ Y V Sbjct: 872 SKRFVELRQFM--ADYKLLLSGTPLHNNLEELWTLLHFINPQIYPYYEEF---RRRYADV 926 Query: 353 ADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHG 412 +A A+ K L EM+ + + + ++ + E R EL M ++ + Sbjct: 927 ENAAAIGENKQKQLLSLQQELHEMVLRRVKKDVEKSLPNKVERIL--RVELSPMQVEWY- 983 Query: 413 TSRVLFRNTR--NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP 470 +L RN G + L I + L + Y Sbjct: 984 -RNILTRNYDQLAKNSGGSRSSLQNICMELKKVCNHPF------------------LCYE 1024 Query: 471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIR 530 Q + ++ L+ L R +VL+ + + L R G + Sbjct: 1025 PVDRQSWLQGLVYGSGKICLLDKLLARLKE-RGHRVLIFSQMVRMLNIISEYLTMR-GFK 1082 Query: 531 AAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDL 589 M R +A F + ++ LL ++ G G N A ++++D +NP Sbjct: 1083 HQRLDGTMGREVRKKAMDHFNDPNSDDFCFLLSTKAGGLGINLTTADTVIIYDSDWNPQN 1142 Query: 590 LEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYND 649 Q R RIGQ +QI+ + + + ++ + + D++ Sbjct: 1143 DLQAEARAHRIGQTKTVQIYRLVTKDSIEQTILERAKTKM------------VLDAL--- 1187 Query: 650 LINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRL 688 ++ L DD C E L L+ G +L Sbjct: 1188 VVQGLNKKGNAVVLDDANSKCGFSREELAKILKFGASKL 1226 >UniRef50_C5KT21 Chromatin remodelling complex ATPase chain Iswi, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5KT21_9ALVE Length = 1003 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 103/562 (18%), Positives = 194/562 (34%), Gaps = 72/562 (12%) Query: 154 LIPHQLNIAHDVGRR--HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAER-VLIIVPET 210 + P+QL+ + + +LADE+GLGKT++ +L G +++ P+T Sbjct: 1 MRPYQLDGLTWLCQLCVAHVNGILADEMGLGKTLQTISLLTTVTSKGWVHPPHMVVGPKT 60 Query: 211 LQHQWLVEMLRRFNLRFALF------DDERYAEAQHDAYNPF-DTEQLVICSLDFARRSK 263 W E +RF + D+ R ++ P + +++ + D R K Sbjct: 61 TLLNWAGEF-KRFCPSMRVILLHGTHDERRETIEEYLMDVPQPKSFDVLLTTFDVCRIEK 119 Query: 264 QRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMES 323 L + W V+DEAH + ++ S Q + LLLT TP Q ++ Sbjct: 120 A---ALRKIRWGYFVMDEAHRI---KNEQSSLSQVVRSFT--TQRRLLLTGTPLQNNLQE 171 Query: 324 HFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIE 383 +A L L P+ F + QF D + ++ S D + +L ++ + Sbjct: 172 LWALLNFLMPSVFTNAKQF-----------DGMLERISQEHESRDVITVLHRILRPFMLR 220 Query: 384 PLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQ 443 L D + +S V + + R L+R+ L K+ Sbjct: 221 RLKSDVAKDLPEKRS-----VYVFVPATEMQRTLYRDLLMKNTVLSTESLSGHKMR---L 272 Query: 444 YQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS--- 500 T +++ E Y D W ++ + L Sbjct: 273 LNTLMQLRKCCNHPYLFEGMEPGPPY---------FDGPHLWENSGKLRVVDKLLERLAV 323 Query: 501 ---HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGA 557 +VL+ ++ LR + G ++ +R F D+ Sbjct: 324 PGPQGKNQVLIFTQMTRMLDIMDDYLRLK-GYGYCRIDGDTAMSDRQAMIDDFTRPDSDK 382 Query: 558 QVLL-CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKT 616 V + + G G N A++++++D FNP + Q I R RIGQ + ++ + T Sbjct: 383 FVFILSTRAGGLGINLNTANYVIIYDSDFNPQMDLQAIDRAHRIGQKRQVTVYRLVTQDT 442 Query: 617 AQSVLVRWYHEGLDA---------FEHTCPTGRTIYDSVYNDL--------INYLASPDQ 659 + +V + + F + D V + I + Q Sbjct: 443 VEEKIVERAAKKMQIDNLVIQKGKFNQARASNAPTKDEVSQIIRFGAQEVVIVDPSQGQQ 502 Query: 660 TEGFDDLIKNCREQHEALKAQL 681 D +++ E+ + AQ+ Sbjct: 503 EVDIDAILRTAEERTADIDAQM 524 >UniRef50_Q8SWP7 Similarity to CHROMODOMAIN HELICASE DNA-BINDING PROTEIN 2 n=1 Tax=Encephalitozoon cuniculi RepID=Q8SWP7_ENCCU Length = 1251 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 113/640 (17%), Positives = 219/640 (34%), Gaps = 70/640 (10%) Query: 153 SLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLS-GAAERVLIIVPE 209 L +QL + + R ++ADE+GLGKT+++ ++ VL++ P Sbjct: 301 RLREYQLEGLNWLLNRWYYKQSCIMADEMGLGKTVQSVTFINTLFTKYDYCAPVLVVTPL 360 Query: 210 TLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNP--------FDTEQLVICSLDFARR 261 ++ W E +LR + + R A Y ++I + D Sbjct: 361 SIIPHWEREFEAWTDLRVLKYHENRPGRALIAEYEFVLKKNNLEIRLFDVLITTYDTVMA 420 Query: 262 SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGM 321 + EHL + + + + DEAH L ++A S+ + L +LL+ TP Q + Sbjct: 421 EQ---EHLSQFHFSVGIFDEAHRL---KNAKSKAATILRTL--KFNHKVLLSGTPLQNNI 472 Query: 322 ESHFARLRLLDPNRFHDFAQFVEEQK-NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 ++ L +DP RF F+ E K + + LL L + ++ + ++ Sbjct: 473 SELWSLLNFIDPMRFSSLPHFLGEFKMENINDVEKLQGLLRPLMLRRMKEDVEKSIPTKE 532 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPL 440 + + ++ ++ + L + N N + K +H + Sbjct: 533 ETIIEVALTMIQKRFYRAILEKNIEFLT---KGGKESAPNLLNVMMELRKCCIHPYLIKG 589 Query: 441 PTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS 500 + Q R AE D+ + E E + D E+ ++ S Sbjct: 590 -AEEQILSGYLKKKRERSKAEGAENDITLTSEVLNEDEHQDGNSVISDID-EYYKIFIQS 647 Query: 501 --------------HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRA 546 KVL+ L + L R+ + G R A Sbjct: 648 SGKLVLLDKLLGKLKDGHKVLIFSQMTRCLDLLAEYLAYRK-YKYERIDGGARTENRQAA 706 Query: 547 AAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD 605 F+++ + V LL + G G N A +++FD +NP Q R RIGQ + Sbjct: 707 IDRFSDKTSDVFVFLLSTRAGGVGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQTSE 766 Query: 606 IQIHVPYLEKTAQSVLVRWYHEGLDA---------FEHTCPTGRTIYDSVYNDLINYLAS 656 ++++ E T + + L FE D++ L+ A Sbjct: 767 VKVYRLVTENTYEREMFDKAGLKLGLDRAVLQKMTFEEQKSEKTRKKDAI-ETLLRKGAY 825 Query: 657 PDQTEGFDDLIKNCREQHEALKAQLEQGRDRL----------------LEIHSNGGEKAQ 700 E D + R+ E Q+ + R ++ +E + + + Sbjct: 826 GVLMETDD---ASSRKFCEEDIDQILERRTKIVKHSDGGNVFSKASFQVEEEIDDPDFWE 882 Query: 701 ALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVL 740 L + ++ + + L G++ +D + +L Sbjct: 883 NLLSKRKSEESEGRIRRQMRRLAREGGLSSEDISEIDELL 922 >UniRef50_B0EGK4 DNA repair and recombination protein RAD54B, putative n=2 Tax=Entamoeba RepID=B0EGK4_ENTDI Length = 764 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 94/548 (17%), Positives = 204/548 (37%), Gaps = 36/548 (6%) Query: 94 GVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTS 153 + + L + + P + ++ + F+ +K PY G Sbjct: 141 TITQPKFELKKTTLGNGPIKKKKVSLYNKDNPFSYCIDDKK-EPAILIDPYIG-----KF 194 Query: 154 LIPHQLNIA----HDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPE 209 L PHQ+ H + R +LADE+GLGKT++ ++ ++++I+ P+ Sbjct: 195 LRPHQIEGVKFMYHCIMRGGECGCILADEMGLGKTLQTITLIWTVYKQCNIKKIVIVCPQ 254 Query: 210 TLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF--DTEQLVICSLDFARRSKQRLE 267 +L W E + + + + N F D ++I S + R +E Sbjct: 255 SLIGNWEKEFKKWLGVERIPVQTGSSDSSMKEKVNDFIRDYIPVLIISYEQVRSH---VE 311 Query: 268 HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 L + + L+V DE H + ++ S+ +++ L P ++L+ TP Q G+E ++ Sbjct: 312 TLKKTKIGLIVCDEGHRI---KNLMSKTNSSLKALG--APRHIILSGTPVQNGLEDFYSL 366 Query: 328 LRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQ 387 + P + F A + +L + L + + +L+ Sbjct: 367 IEFCSPGCLGTLSSFKRVFAIPIQKAQDGNASIEEIQLGTERAKELTNKLNDY----VLR 422 Query: 388 AANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTA 447 + +E + E+V + H + L++ +K K++L Q T Sbjct: 423 RTSQVNEKYLPDKTEIVLFIKPSHLQIK-LYKIM---LKELDKKKLDQCGALKYIQLFTK 478 Query: 448 IKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVL 507 + + ++ E++ E + + + F+ ++++ + + +KV+ Sbjct: 479 LCNHPALISKYLMEEKISLNENDENCIKGVTINEESSNKFNITIQFIKEIIIKSK-EKVV 537 Query: 508 VICAKAATALQLEQVLREREGIR------AAVFHEGMSIIERDRAAAWFAEEDTGAQV-L 560 ++ T E ++ E + S +RD ++ + + L Sbjct: 538 LVSNYTKTLDLFEMYFKQEEEYKQKKIFNYLRLDGKTSQKQRDIIVEKINDKSSNFNILL 597 Query: 561 LCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSV 620 L S+ G G N S +++FD +NP +Q + R+ R GQ I+ T + Sbjct: 598 LSSKAGGVGLNLIGCSRLILFDPDWNPAKDKQAMARIWRDGQQKKAMIYRMLCTGTIEEK 657 Query: 621 LVRWYHEG 628 + + + Sbjct: 658 IYQRQLQK 665 >UniRef50_UPI00016E4BB0 UPI00016E4BB0 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E4BB0 Length = 2002 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 98/548 (17%), Positives = 175/548 (31%), Gaps = 44/548 (8%) Query: 170 APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFAL 229 +LADE+GLGKTI++ L + L L+I P + W E L + Sbjct: 8 RRNCILADEMGLGKTIQSITFLFEMYLKAIEGPFLVIAPLSTIPNWEREFRTWTELNVVV 67 Query: 230 FDDERYAEAQHDAYNPF------------DTEQLVICSLDFARRSKQRLEHLCEAEWDLL 277 + + + AY + VI + + L W + Sbjct: 68 YHGSQASRKTIQAYEMYYRDTQGKIIKGVYRFHAVITTFEMILAD---CPELRSVPWRCV 124 Query: 278 VVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFH 337 V+DEAH L ++ + + ++ + + +LLT TP Q +E F+ L L+P RF Sbjct: 125 VIDEAHRL---KNRNCKLLEGLKMM--DMEHKVLLTGTPLQNTVEELFSLLNFLEPERFP 179 Query: 338 DFAQFVEEQKNYR--PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSED 395 F+ E + + + +L L + ++ + +++ ++ N + Sbjct: 180 SEQTFMTEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKY 239 Query: 396 AQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMG 455 ++ ++ S L + N L + L ++G Sbjct: 240 YRAILEKNFSFLSKGGSGGGGGGSSVPN---------LLNTMMELRKCCNHPYLINGAEE 290 Query: 456 ARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAAT 515 P+ Q + D + L +VLV Sbjct: 291 KIAEEFRDTHGTDVPDMPLQAMIHASGKLVLIDKLLPKLKA-----GGHRVLVFSQMVRC 345 Query: 516 ALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQF 574 LE L + + R A F+ D+ V LLC+ G G N Sbjct: 346 LDILEDYLINKR-YPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTA 404 Query: 575 ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEH 634 A ++FD +NP Q R RIGQ+ ++I+ + + + L + Sbjct: 405 ADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKA 464 Query: 635 TCPTGR------TIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRL 688 + + + I L D + E Q+ Q R Sbjct: 465 VLQSMSGRENANSGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTHT 524 Query: 689 LEIHSNGG 696 + I S G Sbjct: 525 ITIESEGK 532 >UniRef50_Q1NL49 SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/DEAH box helicase-like n=3 Tax=Proteobacteria RepID=Q1NL49_9DELT Length = 1022 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 117/554 (21%), Positives = 218/554 (39%), Gaps = 70/554 (12%) Query: 149 GQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVP 208 G + L P+Q++ A + R LLAD++GLGKT++A +LII P Sbjct: 312 GVKARLYPYQIDGAAFLA--GTGRALLADDMGLGKTLQAISAAVWLREHEGVRTILIICP 369 Query: 209 ETLQHQWLVEMLRRFNLRFALFDD---ERYAEAQHDAYNPFDTEQLVICSLDFARRSKQR 265 +L+ QW E+ + L + ER + + ++ I + + R Sbjct: 370 ASLKQQWAREIGKFTELDCRVVQGPPPERGVQYRRES-------DFFIINYELVLRDLSL 422 Query: 266 LEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHF 325 L DL+++DEA + ++ ++ A++ + V LT TP + +E + Sbjct: 423 LNETLRP--DLIILDEAQRI---KNWRTKIASAVKLIPSRYAFV--LTGTPLENRLEELY 475 Query: 326 ARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPL 385 + +++++P +++ + V D +L LS + Q + P+ Sbjct: 476 SLMQVVNPAILGPLWRYMIDFH----VTDEKGKVLGYRNLS----------LLRQRLAPV 521 Query: 386 LQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPK-RELHTIKLPLPTQY 444 + + R+ + L DR R V+ P+ RELH + L + Sbjct: 522 M---------LRRDRRLVKDQLPDRVEQ--------RLDVELTPQQRELHDVGL---STA 561 Query: 445 QTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS---H 501 + +++ S ++R L R+ + G P+++ L L Sbjct: 562 GSLARIAKRRPLTPSEQNRLIAGLQQARMACDAAGLVDKESVGSPKIDELAQILDEVCLQ 621 Query: 502 RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLL 561 K +V +EQ LR R GI H G+ +R F +D+ V L Sbjct: 622 SGLKAVVFSQWELMTRMVEQRLR-RLGIGYVRLHGGVPTAKRGELLERFRSDDSVL-VFL 679 Query: 562 CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVL 621 ++ G G N Q AS +V D+P+NP +LEQR GR+ R+GQ + +QI + + + Sbjct: 680 STDAGGVGLNLQSASVLVNLDVPWNPAVLEQRNGRIHRLGQPNKVQIITMVAANSYEEQV 739 Query: 622 VRWYHEGLDAFEH---------TCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCRE 672 + F+ + + D++ +L P E + ++ Sbjct: 740 LSLVQNKQALFDQVIAEDASEDVVGISKKLLDNLIEELPKLTGEPGTEE--EPAAEDTPP 797 Query: 673 QHEALKAQLEQGRD 686 A + + E+G+D Sbjct: 798 ATVATEEKGEKGKD 811 >UniRef50_UPI0001926057 PREDICTED: similar to chromodomain helicase DNA binding protein 4 n=1 Tax=Hydra magnipapillata RepID=UPI0001926057 Length = 1665 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 115/638 (18%), Positives = 220/638 (34%), Gaps = 85/638 (13%) Query: 154 LIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLLSGAA-ERVLIIVPET 210 L +Q+ + + A R +LADE+GLGKTI+ L+ L G + LI P + Sbjct: 492 LHEYQIEGINWIRYSWAQRDNTILADEMGLGKTIQTITFLNSLLSEGRSEGPFLICAPLS 551 Query: 211 LQHQWLVEMLRRFNLRFAL------------------FDDERYAEAQHDAYNPFD---TE 249 W E + + FDD+ + Q D Sbjct: 552 TIVNWEREFEFWAPNMYVVTYSGNRENRQVIRNYEMTFDDDSMRKGQKAYKVKKDVICKF 611 Query: 250 QLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGV 309 +++ S + L+ + +W +LV+DEAH L ++ SR ++ + + ++ Sbjct: 612 HVLLTSYELVAIDANTLQSI---DWKVLVIDEAHRL---KNNQSRFFRTMT--SYNIDYT 663 Query: 310 LLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY--RPVADAVAMLLAGNKLSN 367 LLLT TP Q +E F L L P++F + F+ E ++ + +L + L Sbjct: 664 LLLTGTPLQNNLEELFHLLNFLCPDKFQNRENFLAEFEDIAKEDQIKKLHEMLGPHMLRR 723 Query: 368 DELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKG 427 + ++L +M + + ++ + + + + L NTR G Sbjct: 724 LKGDVLKDMPSKSEFIVRVELSPMQKKYYKYILTKNFGAL------------NTR----G 767 Query: 428 FPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNF 487 + L I + L S + P +E T + Sbjct: 768 SQQVSLLNIVMELKKCCNHPYLFSTA------------SLEAPRYANNAYEVKGLTEASG 815 Query: 488 DPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAA 547 + + M + +VL+ LE + E G R ++ R A Sbjct: 816 KLVLLYKMLKKLKEQGHRVLIFSQMTRVLDLLEDFM-EGHGWRYERLDGTITGGIRQSAI 874 Query: 548 AWFAEEDTGA-QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 F ++ LL + G G N A + ++D +NP Q R RIGQ + + Sbjct: 875 DRFNLPNSEIFSFLLSTRAGGLGINLATADTVFIYDSDWNPHNDIQAFSRAHRIGQQNKV 934 Query: 607 QIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDL 666 I+ + T + + + + + H V L + A DD+ Sbjct: 935 MIYRFVTKSTVEERITQVAKKKM-MLTHLV---------VRPGLGSKAAQSMSKRELDDI 984 Query: 667 IKNCREQHEALKAQLEQGR--------DRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF 718 +K E+ GR + LL+ + G + ++ +++ + ++ Sbjct: 985 LKFGTEEMFKDDGDDSTGRIVYDDNAINMLLDRSNEGIMEKES---GMDDYLSSFKVASY 1041 Query: 719 AMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSE 756 + D + + + I + +L + E Sbjct: 1042 TVKDKDEPDVEVLKQEADTIDADYWEKLLRHHYEQEQE 1079 >UniRef50_A5DXH8 SNF2-family ATP dependent chromatin remodeling factor snf21 n=2 Tax=Saccharomycetales RepID=A5DXH8_LODEL Length = 1400 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 98/553 (17%), Positives = 202/553 (36%), Gaps = 41/553 (7%) Query: 154 LIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 L +QL + + +LADE+GLGKTI++ ++ + ++ L+IVP + Sbjct: 592 LKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLIEKKHEQKFLVIVPLST 651 Query: 212 QHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLC 270 W +E + ++ ++ + + + Q+++ + ++ R + L Sbjct: 652 ITNWTLEFEKWAPAVKVIVYKGSQQQRKSLQSEVRLGSFQVMLTTYEYVIRERPLLSKFY 711 Query: 271 EAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRL 330 + +++DE H + ++ S+ Q + Q L+LT TP Q + +A L Sbjct: 712 YSH---MIIDEGHRM---KNTNSKLSQTLRQY-YRTKNRLILTGTPLQNNLPELWALLNF 764 Query: 331 LDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAAN 390 + P F+ F E A + +L+ +E ++ + + LL+ Sbjct: 765 VLPKIFNSVKSFDEWFNTPFANTGAQEKI----ELTEEESLLVIRRLHKVLRPFLLRRLK 820 Query: 391 SDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV 450 D E + E V + G VL++ F E+ K + +++ Sbjct: 821 KDVEKDLPDKVEKVLKC-NLSGLQYVLYQQMLKHNALFVGAEVGGAKSGIKGLNNKIMQL 879 Query: 451 SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLV 508 + E+ E + + N W + E L L + +VL+ Sbjct: 880 RKVCNHPFVFEEV-------EAVLNSQKLTNELLWRTSGKFELLDRVLPKFKASGHRVLM 932 Query: 509 ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGS 567 +E LR ++ ++ ER F D+ LL + G Sbjct: 933 FFQMTQIMDIMEDFLRLKD-MKYMRLDGSTKADERQDMLKEFNAPDSDYFCFLLSTRAGG 991 Query: 568 EGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHE 627 G N Q A +++FD +NP Q R RIGQ ++++I + + +++ H+ Sbjct: 992 LGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLISNDSVEEMILERAHQ 1051 Query: 628 GLDAFEHTCPTGR-------TIYDSVYNDLINYLASP--------DQTEGFDDLIKNCRE 672 L+ G+ ++ L+ A+ E ++++ E Sbjct: 1052 KLEIDGKVIQAGKFDNKSTAEEQEAFLKRLLEADATGGDDDENDSLDDEELNEILARSDE 1111 Query: 673 QHEALKAQLEQGR 685 + + E+ R Sbjct: 1112 EKALFNSMDEKRR 1124 >UniRef50_B8J114 Non-specific serine/threonine protein kinase n=10 Tax=Desulfovibrionales RepID=B8J114_DESDA Length = 1091 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 97/538 (18%), Positives = 178/538 (33%), Gaps = 51/538 (9%) Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIA--HDVGRRHAPRVLL 175 G LR + R + + P GL +L +Q + + +L Sbjct: 596 GAATDSFWNNLREKIRSFREVRPIDPPKGLNA---NLRAYQAQGLSYLNFLSEYGFGGIL 652 Query: 176 ADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY 235 ADE+GLGKT++ + + S LI+VP ++ W E +F Y Sbjct: 653 ADEMGLGKTVQTLAFIQYMVQSNYVGPNLIVVPTSVLPNWERE-AEKFVPGLKRLT--IY 709 Query: 236 AEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 + + L+I + RR LE + + E++ +++DEA ++ ++ + Sbjct: 710 GTRREGMFKHIANSDLIITTYALLRRD---LEEMEKYEFNTVILDEAQNI---KNPNTIT 763 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 +A+ ++ + L L+ TP + + ++ L P F DA Sbjct: 764 ARAVRRI--NARMRLCLSGTPIENNLFELWSLFEFLMPGFLGSQHAFQRGIVKPIKDGDA 821 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR 415 + ++ L + +D+ P +++ + A+ EL + L Sbjct: 822 ETLDYLRTRVRPFILRRTKAEVA-KDLPPKVESVTC--CALEEAQAELYAAL-------- 870 Query: 416 VLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ 475 R R V L Q A I+ A +P + Sbjct: 871 --ARKLRAQV------------LADVDQKGLAKSQMSILDALLKLRQIC---CHPRLLKI 913 Query: 476 EFEG--DNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAV 533 + G N FD + +M + KVLV ++Q L E + Sbjct: 914 DIPGFTTNLPSGKFDAFKDMIMEIVEG--GHKVLVFSQFVQMLQIIKQWL-EFSQVPFCY 970 Query: 534 FHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQR 593 +R F L+ + G G N A +++ +D +NP + Q Sbjct: 971 LDGA--SKDRFDQVDRFNNSPDIPIFLISLKAGGTGLNLTSADYVIHYDPWWNPAVESQA 1028 Query: 594 IGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI 651 R RIGQ + + + T + +++ E P T DL Sbjct: 1029 TDRTHRIGQTRQVFSYKLICQNTVEEKILKLQEAKRGVAEAIIPGQDTWKSLTREDLE 1086 >UniRef50_A9TI22 SNF2 family DNA-dependent ATPase (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TI22_PHYPA Length = 1245 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 102/571 (17%), Positives = 203/571 (35%), Gaps = 78/571 (13%) Query: 153 SLIPHQLNIAH--DVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPET 210 SL P+QL + V+LADE+GLGKTI++ +L + L++ P + Sbjct: 293 SLHPYQLEGLNFLRFAWEQNKHVILADEMGLGKTIQSISLLGSLIEENVGLPHLVVAPLS 352 Query: 211 LQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFD---------------------- 247 W E + ++ A A Y F Sbjct: 353 TLRNWEREFATWCPQMNVVMYVGSSQARAILRQYEFFFPQKSSKKSKDKGKKKMAGESKQ 412 Query: 248 ---TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAE 304 +++ S + L+ L +W+ L+VDE H L ++ S+ +Q + + Sbjct: 413 DRVKFDVLLTSYEMINLDTTILKAL---KWECLIVDEGHRL---KNKDSKLFQTLTTFS- 465 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQK--NYRPVADAVAMLLAG 362 +LLT TP Q ++ F + LD +F+ +F +E + N + +LA Sbjct: 466 -TRHRVLLTGTPLQNNLDELFMLMHFLDAGKFNSLEEFQQEFQDINQEEQVGRLHKMLAP 524 Query: 363 NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR 422 + L + ++L EM ++++ ++ ++ E ++ + +L Sbjct: 525 HLLRRVKKDVLKEMPPKKELILRVELSSLQKEFYKAILTKNYQIL--------------- 569 Query: 423 NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNA 482 +G P+ L + + L + G+ ++ + R +L ++ Sbjct: 570 -AKQGGPQVSLTNVVMELRKLCGHPYLLEGVEPTVRNQAEANRQLLE----------NSG 618 Query: 483 TWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 D + L + +VL+ LE L ++ +S E Sbjct: 619 KLLLLDKMMTKLHS-----QGHRVLIYSQFTRMLDILEDWLHLKK-WGYERIDGKISGSE 672 Query: 543 RDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 R + ++ LL + G G N A ++++D +NP Q + R R+G Sbjct: 673 RQIRIDRYNSPNSTKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 732 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 Q + + I T + +++ + + EH + +L + L Sbjct: 733 QQNKVMIFRLVTRGTIEERMMQMTKKKM-VLEHLVVGRMKKENINQEELDDIL-----RY 786 Query: 662 GFDDLIKNCREQHEALKAQLEQGR-DRLLEI 691 G +L E + + + DRLL+ Sbjct: 787 GAMELFSEKDEDGKTRQIHYDDSAIDRLLDR 817 >UniRef50_C7RM65 Non-specific serine/threonine protein kinase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RM65_9PROT Length = 842 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 118/550 (21%), Positives = 210/550 (38%), Gaps = 46/550 (8%) Query: 127 ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIE 186 +R +A + Q + +L P+Q A R A R L+ DE+GLGKT++ Sbjct: 213 EIRRQALADAYPQGADSPGLATLLKVALYPYQRAGALFAAR--AGRALIGDEMGLGKTVQ 270 Query: 187 AGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF 246 A + AA RVLI+ P +L+HQW E+ R R + R A + F Sbjct: 271 ALAAMEIFARHFAAARVLIVCPTSLKHQWEREIARFTERRATVIGGLRAIRQARYAQDDF 330 Query: 247 DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHV 306 I + + R L+ + DL++VDEA + ++ + +A++Q+ Sbjct: 331 CK----ITNYETVSRD---LDLIEAWAPDLVIVDEAQRI---KNWNTIAARALKQI--DS 378 Query: 307 PGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLS 366 P ++LT TP + +E + ++ +D +R + ++E + D ++ L Sbjct: 379 PYAVVLTGTPLENRLEELISIVQFVDQHRLGPTWRLLDEHQQR----DERGRVIGYRDLH 434 Query: 367 NDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVK 426 + M+ + E L Q L + D H + R V Sbjct: 435 RIGETLAPIMLRRRKAEVLEQLPERVDNTLFMPMTPLQA---DHHEEN-------RAQVA 484 Query: 427 GFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWN 486 R HT L Q + + + + S+ + + Sbjct: 485 RIVHRWRHTGFLSEKDQLRLHCALQNMRMSCNSSF--------------LLDHQTDDGFK 530 Query: 487 FDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRA 546 D + L+ + S KV+V T + + L R+ + +FH G+ +R Sbjct: 531 ADELI-ALLDDIFSDPQAKVVVFSQWLRTHELIIRRLAGRD-WQHVLFHGGVPGDKRGAL 588 Query: 547 AAWFAEEDTGAQVLLCSEIGSEGRNFQF-ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD 605 F D +V L ++ G G N Q A+ +V DLP+NP +LEQRIGR+ R+GQ Sbjct: 589 VDRFN-NDPACRVFLSTDAGGVGLNLQHAAAVVVNMDLPWNPAVLEQRIGRVHRLGQTRG 647 Query: 606 IQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDD 665 +Q+ T + ++ F G + L ++ + +Q G + Sbjct: 648 VQVINFVARGTIEEGMLSVLAFKQSLFAGVLDGGDSDIVLQGTRLSKFMETVEQVAGAME 707 Query: 666 LIKNCREQHE 675 + ++ Sbjct: 708 TEAASEDDNQ 717 >UniRef50_UPI000186E785 lymphoid specific helicase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E785 Length = 806 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 102/600 (17%), Positives = 210/600 (35%), Gaps = 67/600 (11%) Query: 119 QIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLA 176 QID D F R + ++ P G +QL + + +LA Sbjct: 162 QIDEEDYFKETRVTRLGYTVSYKQPLLLEGGIMKD---YQLKGCEWLKILFTNGVNGILA 218 Query: 177 DEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA 236 DE+G+GKTI+ + + L++ P + W++E +RF + Sbjct: 219 DEMGMGKTIQVIAFICHMIEQDIKGPFLVVAPLSTVSNWMMEF-KRFAPKVPTLLYHGNE 277 Query: 237 EAQHDAYNPFDT---------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 E + +VI S + R L + W L++DE H + Sbjct: 278 EERKAMLPDILKTTLVMKKLIHPVVITSYNVPMRDTAV---LGKINWYYLIIDEGHRI-- 332 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQK 347 ++ S + + + + G LLLT TP Q + ++ L L P F+ F E Sbjct: 333 -KNHNSLLSRILRKF--NTVGRLLLTGTPLQNNLTELWSLLNFLLPEVFNTLEVF-ESWF 388 Query: 348 NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS---------EDAQS 398 + + + ++ K + D +++L E++ + + N Sbjct: 389 DIKELESNGTKFMS-EKFNIDVVSILQEILVPFLLRREKKDVNLKLPPKKEILIYCPMTP 447 Query: 399 ARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLP-----TQYQTAIKVSGI 453 ++++L ++D+ + + +N + KR L P ++Y+ ++ Sbjct: 448 SQKKLYQGILDKSIEILIKPKENKNEITTLGKR---KCFLQSPYGNKKSKYEEPVESKPT 504 Query: 454 MGARKSAEDRARDML--------------------YPERIYQEFEGDNATWWNFDPR--- 490 + K+ E+R L YP + E + + Sbjct: 505 IEKGKAEEERFITNLVLQNPQMNLRKVVNHPFLIQYPLKEGTEELRIDEDLVKESGKMLV 564 Query: 491 VEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF 550 ++ L+ L S R KV++ LE + R+ + + ++I +R+ F Sbjct: 565 LDALLSKLKS-RGHKVIIFSFFKVVLDILEDYVLLRD-YQYSRLDGDLNIPKRNEEIQKF 622 Query: 551 AEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610 + L+ G G N A ++ +D +NP + Q R RIGQ+ + I+ Sbjct: 623 MDNPEIFVFLITMRSGGLGINLTAADTVIFYDSDWNPTINLQSQDRCHRIGQSKPVMIYR 682 Query: 611 PYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNC 670 ++ T ++ + + G+ S + +N + + + + + Sbjct: 683 LCVKGTIDEKIIERANAKRRLEKMILQKGKFTLGSKNSKKLNLMDFKELKHLLESINHDI 742 >UniRef50_B9XEI0 Non-specific serine/threonine protein kinase n=1 Tax=bacterium Ellin514 RepID=B9XEI0_9BACT Length = 1046 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 94/511 (18%), Positives = 176/511 (34%), Gaps = 54/511 (10%) Query: 154 LIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPET 210 L P+Q + R + +LADE+GLGKT++ I++ L VL++ P + Sbjct: 582 LRPYQKEGVAWLQFLRDNGFGGILADEMGLGKTLQVLAIINALRSLKNLNAPVLVVCPTS 641 Query: 211 LQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHL 269 L W E + LR + +H + + LVI S RR + L Sbjct: 642 LVFNWAAEAAKFTPELRVVALHGPQ----RHSLFAEISQKDLVITSYALLRRDAEHYRGL 697 Query: 270 CEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLR 329 E+D +V+DEA H+ ++ ++ QA++ + L+LT TP + + ++ Sbjct: 698 ---EFDTVVLDEAQHI---KNRQTQNAQAVKSI--RTRRRLVLTGTPLENSVLDLWSIFD 749 Query: 330 LLDPNRFHDFAQFVEEQKNYRPVADAVAMLLA-GNKLSNDELNMLGEMIGEQDIEPLLQA 388 L P F E + + + +L L L + + E + Q Sbjct: 750 FLMPGYLGSAQDFKERYEAPIVREKNLEVQKRLARRLRPFMLRRLKREVAKDLPEKIEQV 809 Query: 389 ANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAI 448 + + + Q R +VL + + V L+ ++ + T Sbjct: 810 SYCELNEGQ------------RALYQQVLEASRKEIVNAVDANGLNKSRMVVLTALLRLR 857 Query: 449 KVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS--HRSQKV 506 ++ + +S + A +VE L +V Sbjct: 858 QICCDLRLLESKLE-------------------AKPSEPSGKVELFGELLEEVVDGGHRV 898 Query: 507 LVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG 566 LV L + L E I +R + F + L+ + G Sbjct: 899 LVFSQFTTMLGLLRERL-AAENIEFCYLDGAT--KDRAQVVERFQRDSRIPVFLISLKAG 955 Query: 567 SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYH 626 G N A ++ FD +NP + Q R RIGQ + + T + ++ Sbjct: 956 GTGLNLTGADTVIHFDPWWNPAVEAQATDRAHRIGQKRVVTSYKLITRGTVEEKILNLQT 1015 Query: 627 EGLDAFEHTCPTGRTIYDSV-YNDLINYLAS 656 F+ + +++ + ++ + L S Sbjct: 1016 RKRALFQGMLGGEEQLAEALSWEEIQDLLTS 1046 >UniRef50_B8L1P8 ATP-dependent helicase HepA n=2 Tax=Proteobacteria RepID=B8L1P8_9GAMM Length = 929 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 168/919 (18%), Positives = 314/919 (34%), Gaps = 76/919 (8%) Query: 55 FNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDR 114 F PG+ + + G + V+ + L +ES + E+ L + Sbjct: 8 FLPGNLVRAR-GREWVVQSDSRRD-WLRLRPLSGADDESIALIPELELHPVEPATFDWPD 65 Query: 115 LFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVL 174 + L A + + P+ +QL R R+L Sbjct: 66 P--ARAGNHAAALLLRDALRLTLRAGAGPFRSFGNIAVEPRGYQLVPLLMALRLSTVRLL 123 Query: 175 LADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDER 234 +AD+VG+GKTIEAG+I + + G RV I+ P L QW E+ RFNL+ Sbjct: 124 IADDVGIGKTIEAGLIARELMDRGEITRVAILCPPHLVEQWQSELETRFNLQAVALTSSS 183 Query: 235 YAEAQHD---AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA 291 + + D FD +V+ SLD+ + + R + L A + ++VDEAH S Sbjct: 184 ASRIERDLPHGVRLFDHHPVVVVSLDYIKSERHREQFLATAP-ECIIVDEAHTCASSGAG 242 Query: 292 PSREYQAIEQLAEHV-PGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR 350 ++ +++LA ++LLTATP + + L LLDP + + Sbjct: 243 KQLRFELLQRLARDAQRHLILLTATPHSGDETAFYNLLSLLDPRFAALQGRMTASDPLRQ 302 Query: 351 PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSML--- 407 +A + + G+ + L + + A Q+ L Sbjct: 303 ELARHFVQRRRKDIVEWQTEAHDGQGFPRRMKTELTYQLSGEWGAFFDAVQDYCRELAET 362 Query: 408 ---MDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGAR---KSAE 461 ++ G R+++ T ++ +K T + + + R A+ Sbjct: 363 VEQQEQQGGGRLIWYATLALLRCVASSPAAAVKALTTRLEGTVLDEALLGDERLHDGKAD 422 Query: 462 DRARDMLYPERIYQEFEGDNATWW---------NFDPRVEWLMGYLTSHRSQK--VLVIC 510 D + L P Q+ DP++ L+ ++ +V C Sbjct: 423 DLSGSDLEPPAQVQDAAPRLQALIADAQRLSGKAGDPKLAALLRHVDLLVKDGYYPVVFC 482 Query: 511 AKAATALQLEQVLREREG-IRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEG 569 TA + + L+ ++ ER ED ++L+ ++ SEG Sbjct: 483 RYIGTAHYVAEHLKATFPRATVDAVTGELTPEERRERVDGL--EDAEQRILVATDCLSEG 540 Query: 570 RNFQFA-SHMVMFDLPFNPDLLEQRIGRLDRIGQAHD-IQIHVPYLEKT-AQSVLVRWYH 626 N Q + +V +DL +NP EQR GR+DR GQ D ++ + Y + ++ Sbjct: 541 INLQHLFTAVVHYDLAWNPTRHEQREGRVDRFGQQADEVRCTMLYGQDNPVDGFVLNVIL 600 Query: 627 EGLDAFEHTCP------------TGRTIYDSVYNDLINYLASPDQTEGF---DDLIKNCR 671 + +A + + ++ + ASP F + L+ + Sbjct: 601 KKGEAIQKELGVLVPMPEDEARINAALVKAALMQRSESRTASPQVAFDFGEPEQLLAPLQ 660 Query: 672 EQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQD 731 Q + + R + E + + ++ F + +G + Sbjct: 661 AQWRDALEKAKANRTVFAQRRIKPDEVLPEWYKQQQALGTQDDVQRFLQSACVRLGSPLE 720 Query: 732 DRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLI----RNG 787 +P H+ L+++GI D+ + + HPL+ ++ Sbjct: 721 VSRKQTARFSP-QHLPDALRQRLADEGI----DKPQLIDFSELHR---SHPLVGLLAQHL 772 Query: 788 LDLILSGDT---GSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRML 844 L+ L G+ G + L N V TL + + Q + F + Sbjct: 773 LEDALGGERPMAGRCA-ATLTNDVEVVTTLYL---LRLRHQLSYVRRREPFQMMAEETVA 828 Query: 845 LDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALID 904 L G N + + +R L A Q+++ L + + L Sbjct: 829 LAVQGRNAPQWLADDGVSRLLECTPSGNLQP--EAAQREIRTALD----FLAAHPQQLRA 882 Query: 905 AARNEADEKLSAELSRLEA 923 A+ A+ L A+ R+ Sbjct: 883 VAQERANALL-ADHQRVRE 900 >UniRef50_D1J338 Whole genome shotgun sequence of line PN40024, scaffold_24.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1J338_VITVI Length = 1884 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 110/554 (19%), Positives = 195/554 (35%), Gaps = 57/554 (10%) Query: 151 RTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMIL------HQQLLSGAAER 202 + +L +Q + + RR +L D++GLGKT++A I+ H+ GA Sbjct: 1285 KVTLRRYQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAIVASDIEEHRTSKDGAYPP 1344 Query: 203 VLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNP---FDTEQLVICSLDFA 259 LII P TL W E+ + + ++ +Y + HD + F+ ++I S D Sbjct: 1345 SLIICPSTLVGHWAYEIEKY--IDSSVITTLQYVGSAHDRMSLQGLFEKHNVIITSYDVV 1402 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 R+ L L W+ ++DE H + +++ S+ A++QL L+L+ TP Q Sbjct: 1403 RKDVDYLGQLL---WNYCILDEGHII---KNSKSKITSAVKQL--KAQHRLILSGTPIQN 1454 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVA--------DAVAMLLAGNKLSNDELN 371 + ++ L P QF A DA A LA L + Sbjct: 1455 NILDLWSLFDFLMPGFLGTERQFQATYGKPLQAARDSKCSAKDAEAGALAMEALHKQVMP 1514 Query: 372 MLGEMIGEQDI----EPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN----TRN 423 L ++ + E ++Q D Q E S RH S ++ RN T Sbjct: 1515 FLLRRTKDEVLSDLPEKIIQDRYCDLCPVQLKLYEQFSGSHVRHEISSIVKRNESTDTGE 1574 Query: 424 GVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNAT 483 G PK H + QY + ++ + D +L Sbjct: 1575 GNSASPKASSHVFQAL---QYLLKLCGHPLLVVGEKIPDSLTTILSEFFPGTSDIMSELH 1631 Query: 484 WWNFDPRVEWLMGYLT---------------SHRSQKVLVICAKAATALQLEQVL--RER 526 + P++ L L S +VL+ A +E+ L Sbjct: 1632 KLHHSPKLIALHEILEECGIGVDASSSEGAVSVGQHRVLIFAQHKAFLDIIERDLFHTHM 1691 Query: 527 EGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFN 586 + + + +R F + T +LL + +G G N A +V + +N Sbjct: 1692 KSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWN 1751 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSV 646 P Q + R R+GQ + +H + T + ++ L + ++ Sbjct: 1752 PMRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKLSVANSVINSENASMKTM 1811 Query: 647 YNDLINYLASPDQT 660 D + L + + Sbjct: 1812 NTDQLLDLFTSAEA 1825 >UniRef50_D0NZU0 Chromatin structure-remodeling complex subunit snf21-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NZU0_PHYIN Length = 1309 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 107/573 (18%), Positives = 207/573 (36%), Gaps = 45/573 (7%) Query: 153 SLIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPE 209 L +QL + + +LADE+GLGKTI++ +L L++VP Sbjct: 483 DLKEYQLRGLQWMVSLYDNHLNGILADEMGLGKTIQSISLLTYVTEVKHNHGPFLVVVPL 542 Query: 210 TLQHQWLVEMLRR-FNLRFALFDDE-RYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLE 267 + W+ E + +L ++ + + H +++ + ++ + K Sbjct: 543 STLSNWVNEFKKWAPDLVLVVYKGPPQVRKELHKQEMASCQFNVLLTTYEYIMKDKHV-- 600 Query: 268 HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 L + +W ++VDE H + ++A S+ + + LLLT TP Q + +A Sbjct: 601 -LRKYDWQYIIVDEGHRM---KNAQSKFAMTLGSM-YTSRNRLLLTGTPLQNSLPELWAL 655 Query: 328 LRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQ 387 L L P F F EQ +P A N+LS++E ++ + + LL+ Sbjct: 656 LNFLLPTIFESVDTF--EQWFSKPFAQFSGN-GDSNELSDEERMLIINRLHQVLRPFLLR 712 Query: 388 AANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTA 447 + D + E V + G ++++R + G + + K +Y + Sbjct: 713 RVKASVLDQLPDKVEKVLKC-ELSGWQKIMYRRIQEGGALLMETTDDSGKKKGKAKYTSK 771 Query: 448 IKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQK 505 + +M RK +P + + E L L + + Sbjct: 772 GLSNVLMQLRK-------VCNHPYLFQTNGYQIDFDIVRSSGKFELLDRMLPKLKAAGHR 824 Query: 506 VLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSE 564 VL+ LE R G R S ER++ F D+ + LL + Sbjct: 825 VLMFSQMTQLMHVLEDYFNYR-GFRYLRLDGSTSADEREQRMFMFNASDSPFFIFLLSTR 883 Query: 565 IGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW 624 G G N A +++FD +NP + Q R RIGQ +++++ + ++ Sbjct: 884 AGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSR 943 Query: 625 YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQG 684 + ++ G+ N ++ + LIK +E+ ++ Sbjct: 944 ATDKMNMNNLVVEAGK---------FNNKSKEAERRAMLESLIKMEQEEAAHAAHGDDES 994 Query: 685 RDRLLEIHSNGGEKAQALAESIEEQDDDTNLIA 717 + LL + E + D++ L Sbjct: 995 SNVLL---------DDEINEMMALTDEELALYH 1018 >UniRef50_B8LC70 Chromodomain-helicase (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LC70_THAPS Length = 690 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 103/645 (15%), Positives = 216/645 (33%), Gaps = 56/645 (8%) Query: 101 FLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN 160 ++ ++P R + R Y ++ + + + L +Q++ Sbjct: 21 DINDDAAIAEPLKRHRNLKRSPPQRLNKSY--LQFRDKLYDPKVPHIYKDGHKLRDYQVD 78 Query: 161 IAHDVGRRHAPR--VLLADEVGLG---------KTIEAGMILHQQLL-SGAAERVLIIVP 208 + + + R +LADE+GLG +T++ L L++VP Sbjct: 79 GVNWLSSCYYKRTGAILADEMGLGAHPCLSLYPRTVQIVTYLEHLFRVEKLNGPFLVVVP 138 Query: 209 ETLQHQWLVEMLRRFNLRFALFDDERYAEA----------QHDAYNP-FDTEQLVICSLD 257 + W E NL+ ++ D + + + P + +++ + D Sbjct: 139 LSTVEHWRREFEGWTNLQCCVYHDRQRVWRDVLREYEWYYEDRPHTPDYLKFNVLVTTYD 198 Query: 258 FARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEH------VPGVLL 311 + + + W + VVDEAH L + + + +++++ +L Sbjct: 199 TLIGD---FDVIGDVPWRVTVVDEAHRLRNVKG---KLLECMKEISAKGTLKYGYQSRVL 252 Query: 312 LTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY--RPVADAVAMLLAGNKLSNDE 369 +T TP Q + + L ++P+ F +F N R +A+ ++ L + Sbjct: 253 MTGTPLQNNTQELWTLLNFIEPSLFQSLEEFEHNFGNMANREQVEALQHKISPFMLRRVK 312 Query: 370 LNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFP 429 ++ ++ +++ ++ + + ++ + + L G+S+ + N Sbjct: 313 EDVAKDIPAKEETVIDVELTSIQKQYYRAIFEHNHAFL--SMGSSKAVAPKLMNIQMELR 370 Query: 430 KRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDP 489 K H L + + + + D PE + + Sbjct: 371 KCCNHPFLLDGIESREMEKR------HEELSASGELDGKSPEEQHHILN--EYGYVMSSG 422 Query: 490 RVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAA 547 ++ L L R + KVL+ + RE R + ER +A Sbjct: 423 KMVLLDKLLPKLRQEGHKVLIFSQFVKMLDLISDYCDFRE-FRYERLDGRVRGNERQKAI 481 Query: 548 AWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 F E LL + G G N A ++FD +NP Q R RIGQ D+ Sbjct: 482 DRFETEKDSFVFLLSTRAGGVGINLTAADICIIFDSDWNPQNDVQAQARCHRIGQTKDVM 541 Query: 608 IHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLI 667 I+ +T + + + L + T D + N G L+ Sbjct: 542 IYRLVTSRTFEQEMFDRASKKLGLEQAVLGTFGQ--DEAEDKPTNKEMEQLLKRGAYALL 599 Query: 668 KNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDD 712 ++ E E K + + +L + L I+E ++ Sbjct: 600 ED--ENDEQGKEFVADDIENILAKRTRNFITPDILLNKIDEMEEA 642 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B7VIC2 RNA polymerase-associated protein rapA n=29 Tax=... 935 0.0 UniRef50_A7MSB2 RNA polymerase-associated protein rapA n=212 Tax... 933 0.0 UniRef50_A1RFP5 RNA polymerase-associated protein rapA n=21 Tax=... 909 0.0 UniRef50_A3MZ32 RNA polymerase-associated protein rapA n=32 Tax=... 882 0.0 UniRef50_C6AQR6 RNA polymerase-associated protein RapA (ATP-depe... 851 0.0 UniRef50_Q2SC88 Superfamily II DNA/RNA helicase, SNF2 family n=2... 849 0.0 UniRef50_B3PHI1 RNA polymerase-associated protein HepA n=2 Tax=G... 842 0.0 UniRef50_A5UAT0 RNA polymerase-associated protein rapA n=16 Tax=... 836 0.0 UniRef50_B7V6T4 RNA polymerase-associated protein rapA n=24 Tax=... 823 0.0 UniRef50_C6MG44 SNF2-related protein n=1 Tax=Nitrosomonas sp. AL... 814 0.0 UniRef50_Q5ZT66 ATP-dependent RNA helicase n=9 Tax=Gammaproteoba... 809 0.0 UniRef50_B4RZE3 RNA polymerase-associated protein HepA n=3 Tax=A... 809 0.0 UniRef50_B7RWY5 Type III restriction enzyme, res subunit family ... 807 0.0 UniRef50_C0N229 Type III restriction enzyme, res subunit family ... 779 0.0 UniRef50_A4A3Z1 RNA polymerase associated protein rapA n=1 Tax=C... 768 0.0 UniRef50_Q1R0C7 Helicase-like protein n=4 Tax=Gammaproteobacteri... 760 0.0 UniRef50_C5SAQ5 Helicase domain protein n=1 Tax=Allochromatium v... 736 0.0 UniRef50_Q1Q8E0 Helicase-like n=22 Tax=Gammaproteobacteria RepID... 735 0.0 UniRef50_UPI0000E0E48B ATP-dependent helicase HepA n=1 Tax=Glaci... 735 0.0 UniRef50_B9XDU2 SNF2-related protein n=1 Tax=bacterium Ellin514 ... 734 0.0 UniRef50_A0Z260 ATP-dependent helicase HepA n=1 Tax=marine gamma... 725 0.0 UniRef50_Q0VNA6 RNA polymerase-associated protein HepA n=2 Tax=A... 722 0.0 UniRef50_B5JQV3 Type III restriction enzyme, res subunit family ... 719 0.0 UniRef50_A6VZC5 Helicase domain protein n=2 Tax=Marinomonas RepI... 715 0.0 UniRef50_B1ZQP7 Helicase domain protein n=4 Tax=Bacteria RepID=B... 707 0.0 UniRef50_A6DT84 ATP-dependent helicase HepA n=1 Tax=Lentisphaera... 689 0.0 UniRef50_C0QC91 RapA n=1 Tax=Desulfobacterium autotrophicum HRM2... 688 0.0 UniRef50_C9RJU1 Helicase domain protein n=1 Tax=Fibrobacter succ... 661 0.0 UniRef50_O61845 Temporarily assigned gene name protein 192 (Frag... 583 e-164 UniRef50_B7Z002 Kismet, isoform C n=2 Tax=Fungi/Metazoa group Re... 577 e-163 UniRef50_Q9VPL9 Kismet, isoform A n=10 Tax=Sophophora RepID=Q9VP... 576 e-162 UniRef50_C4Q1A8 Expressed protein n=1 Tax=Schistosoma mansoni Re... 575 e-162 UniRef50_Q8TD26 Chromodomain-helicase-DNA-binding protein 6 n=30... 575 e-162 UniRef50_Q9P2D1 Chromodomain-helicase-DNA-binding protein 7 n=26... 572 e-161 UniRef50_B4LU61 GJ17250 n=6 Tax=cellular organisms RepID=B4LU61_... 572 e-161 UniRef50_UPI000180D3C0 PREDICTED: similar to chromodomain helica... 572 e-161 UniRef50_Q29NV9 GA17619 n=5 Tax=Eukaryota RepID=Q29NV9_DROPS 569 e-160 UniRef50_Q4SNT6 Chromosome 15 SCAF14542, whole genome shotgun se... 568 e-160 UniRef50_Q5TQJ2 AGAP008482-PA (Fragment) n=94 Tax=cellular organ... 566 e-159 UniRef50_Q4RLJ2 Chromosome undetermined SCAF15020, whole genome ... 565 e-159 UniRef50_UPI00016E17D4 UPI00016E17D4 related cluster n=2 Tax=Tet... 563 e-158 UniRef50_Q9HCK8 Chromodomain-helicase-DNA-binding protein 8 n=26... 563 e-158 UniRef50_Q3L8U1 Chromodomain-helicase-DNA-binding protein 9 n=47... 562 e-158 UniRef50_A8Q392 Associated with TFs and helicases family protein... 562 e-158 UniRef50_UPI00006A0EF1 Chromodomain-helicase-DNA-binding protein... 562 e-158 UniRef50_B0R0I6 Chromodomain-helicase-DNA-binding protein 8 n=1 ... 561 e-158 UniRef50_A7RMN4 Predicted protein (Fragment) n=14 Tax=Eumetazoa ... 558 e-157 UniRef50_UPI0001795D73 PREDICTED: similar to Chromodomain-helica... 557 e-157 UniRef50_Q6C828 YALI0D23287p n=2 Tax=Yarrowia lipolytica RepID=Q... 557 e-157 UniRef50_UPI000175F9EE PREDICTED: similar to chromodomain helica... 557 e-157 UniRef50_Q6FJN8 Strain CBS138 chromosome M complete sequence n=5... 554 e-156 UniRef50_P22082 Transcription regulatory protein SNF2 n=7 Tax=ce... 554 e-156 UniRef50_O94421 SWI/SNF chromatin-remodeling complex subunit snf... 554 e-156 UniRef50_UPI00016E800D UPI00016E800D related cluster n=1 Tax=Tak... 551 e-155 UniRef50_C4R9B5 Catalytic subunit of the SWI/SNF chromatin remod... 550 e-154 UniRef50_Q6W8T1 Global transcription activator Snf2p n=2 Tax=Euk... 549 e-154 UniRef50_A2D9P9 F/Y-rich N-terminus family protein n=1 Tax=Trich... 548 e-154 UniRef50_A5DUS7 SNF2-family ATP dependent chromatin remodeling f... 545 e-153 UniRef50_Q54UZ8 Myb domain-containing protein n=1 Tax=Dictyostel... 545 e-153 UniRef50_C4YJG3 SNF2-family ATP dependent chromatin remodeling f... 543 e-152 UniRef50_B9RSY8 Putative uncharacterized protein n=1 Tax=Ricinus... 543 e-152 UniRef50_C5DF84 KLTH0D13046p n=1 Tax=Lachancea thermotolerans CB... 542 e-152 UniRef50_Q54Q16 Chromo domain-containing protein n=2 Tax=Eukaryo... 542 e-152 UniRef50_Q0CA85 SNF2-family ATP dependent chromatin remodeling f... 540 e-151 UniRef50_C4Y7P0 Putative uncharacterized protein n=1 Tax=Clavisp... 540 e-151 UniRef50_D1ZML7 Putative STH1 protein n=1 Tax=Sordaria macrospor... 537 e-151 UniRef50_Q6CVY8 KLLA0B08327p n=2 Tax=Saccharomycetaceae RepID=Q6... 537 e-151 UniRef50_Q7RYI6 SNF2-family ATP dependent chromatin remodeling f... 536 e-150 UniRef50_B0ETQ4 Chromodomain helicase hrp1, putative n=2 Tax=Ent... 536 e-150 UniRef50_B6Q1R2 RSC complex subunit (Sth1), putative n=2 Tax=Tri... 536 e-150 UniRef50_P25439 ATP-dependent helicase brm n=49 Tax=Eukaryota Re... 536 e-150 UniRef50_C8VN25 Catalytic subunit of the SWI/SNF chromatin remod... 535 e-150 UniRef50_Q4PFD0 Putative uncharacterized protein n=3 Tax=Basidio... 535 e-150 UniRef50_A9TXL2 SWI/SNF class chromatin remodeling complex prote... 535 e-150 UniRef50_D0N059 Chromodomain-helicase-DNA-binding protein, putat... 534 e-150 UniRef50_B5DRW4 GA28654 n=7 Tax=Coelomata RepID=B5DRW4_DROPS 533 e-149 UniRef50_Q3TKT4 Transcription activator BRG1 n=33 Tax=Euteleosto... 533 e-149 UniRef50_A5DXH8 SNF2-family ATP dependent chromatin remodeling f... 533 e-149 UniRef50_C4JNC7 SNF2-family ATP dependent chromatin remodeling f... 532 e-149 UniRef50_Q656N0 Putative STH1 protein n=1 Tax=Oryza sativa Japon... 531 e-149 UniRef50_O60264 SWI/SNF-related matrix-associated actin-dependen... 530 e-148 UniRef50_D1HYB3 Whole genome shotgun sequence of line PN40024, s... 530 e-148 UniRef50_Q5K9G4 Putative uncharacterized protein n=2 Tax=Filobas... 530 e-148 UniRef50_Q5BN47 SPLAYED splice variant n=143 Tax=Eukaryota RepID... 530 e-148 UniRef50_B9EGQ8 SMARCA4 protein n=2 Tax=Euteleostomi RepID=B9EGQ... 530 e-148 UniRef50_P51532 Transcription activator BRG1 n=64 Tax=Euteleosto... 529 e-148 UniRef50_Q19106 Protein F01G4.1, confirmed by transcript evidenc... 528 e-148 UniRef50_D2UX51 Chromodomain helicase DNA binding protein n=1 Ta... 528 e-148 UniRef50_P51531 Probable global transcription activator SNF2L2 n... 527 e-147 UniRef50_A8QEY4 BRM protein, putative n=3 Tax=Chromadorea RepID=... 526 e-147 UniRef50_C4V724 Putative uncharacterized protein n=1 Tax=Nosema ... 526 e-147 UniRef50_C4LZC7 Chromodomain-helicase-DNA-binding protein, putat... 526 e-147 UniRef50_UPI00016E4BB0 UPI00016E4BB0 related cluster n=1 Tax=Tak... 524 e-147 UniRef50_P32597 Nuclear protein STH1/NPS1 n=21 Tax=Saccharomycet... 524 e-147 UniRef50_D1HST8 Whole genome shotgun sequence of line PN40024, s... 524 e-147 UniRef50_D0NZU0 Chromatin structure-remodeling complex subunit s... 522 e-146 UniRef50_D0NGD8 Putative uncharacterized protein n=1 Tax=Phytoph... 522 e-146 UniRef50_O14647 Chromodomain-helicase-DNA-binding protein 2 n=19... 520 e-146 UniRef50_A9T545 SNF2 family chromodomain-helicase n=1 Tax=Physco... 520 e-145 UniRef50_Q12873 Chromodomain-helicase-DNA-binding protein 3 n=10... 520 e-145 UniRef50_A2FI37 SNF2 family N-terminal domain containing protein... 520 e-145 UniRef50_D2VNB4 Helicase-like protein n=1 Tax=Naegleria gruberi ... 519 e-145 UniRef50_B7XJ60 SWF/SNF family helicase n=1 Tax=Enterocytozoon b... 518 e-145 UniRef50_C4QF78 Helicase, putative n=1 Tax=Schistosoma mansoni R... 517 e-145 UniRef50_A9TI22 SNF2 family DNA-dependent ATPase (Fragment) n=2 ... 516 e-144 UniRef50_Q8TDI0 Chromodomain-helicase-DNA-binding protein 5 n=58... 516 e-144 UniRef50_A2ED18 SNF2 family N-terminal domain containing protein... 516 e-144 UniRef50_B7FTA0 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 515 e-144 UniRef50_D0NVP0 Putative uncharacterized protein n=1 Tax=Phytoph... 515 e-144 UniRef50_UPI000180CCFF PREDICTED: similar to chromodomain helica... 515 e-144 UniRef50_A9TQR2 SNF2 family chromodomain-helicase n=1 Tax=Physco... 515 e-144 UniRef50_Q241C2 HSA family protein n=5 Tax=Oligohymenophorea Rep... 515 e-144 UniRef50_A2Q9V0 Complex: ISW2p of S. cerevisiae forms a two-subu... 514 e-144 UniRef50_D1HIU5 Whole genome shotgun sequence of line PN40024, s... 514 e-143 UniRef50_A2DAM4 Type III restriction enzyme, res subunit family ... 513 e-143 UniRef50_Q9S775 CHD3-type chromatin-remodeling factor PICKLE n=1... 513 e-143 UniRef50_Q08VX8 Type III restriction enzyme, res subunit family ... 512 e-143 UniRef50_A2FPM0 F/Y-rich N-terminus family protein n=1 Tax=Trich... 512 e-143 UniRef50_Q5WN07 Os05g0150300 protein n=4 Tax=Magnoliophyta RepID... 512 e-143 UniRef50_D0NE95 Chromodomain protein, putative n=1 Tax=Phytophth... 512 e-143 UniRef50_B9HV84 Chromatin remodeling complex subunit n=11 Tax=Em... 512 e-143 UniRef50_A4S9B5 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 512 e-143 UniRef50_B6AJZ0 SNF2 family helicase, putative n=1 Tax=Cryptospo... 511 e-143 UniRef50_Q54CF8 Chromo domain-containing protein n=1 Tax=Dictyos... 511 e-143 UniRef50_A2F9K3 F/Y-rich N-terminus family protein n=1 Tax=Trich... 510 e-143 UniRef50_A2FNE0 SNF2 family N-terminal domain containing protein... 510 e-143 UniRef50_B9HP20 Chromatin remodeling complex subunit n=1 Tax=Pop... 510 e-142 UniRef50_A2DTG9 F/Y-rich N-terminus family protein n=1 Tax=Trich... 510 e-142 UniRef50_Q7G8Y3 Probable chromatin-remodeling complex ATPase cha... 509 e-142 UniRef50_A9VAE6 Predicted protein n=1 Tax=Monosiga brevicollis R... 509 e-142 UniRef50_Q4SCU8 Chromosome undetermined SCAF14648, whole genome ... 508 e-142 UniRef50_B7G2T7 Imitation switch isoform 1, alias nucleosome rem... 508 e-142 UniRef50_A0C3B5 Chromosome undetermined scaffold_147, whole geno... 508 e-142 UniRef50_B8LC70 Chromodomain-helicase (Fragment) n=1 Tax=Thalass... 508 e-142 UniRef50_Q54CI4 Myb domain-containing protein n=1 Tax=Dictyostel... 508 e-142 UniRef50_Q8RWY3 Putative chromatin-remodeling complex ATPase cha... 507 e-142 UniRef50_A2EPF9 Type III restriction enzyme, res subunit family ... 507 e-142 UniRef50_A2EGL7 SNF2 family N-terminal domain containing protein... 507 e-141 UniRef50_C4Q8K7 Chromodomain helicase DNA binding protein, putat... 506 e-141 UniRef50_A7ARU3 Chromo-helicase DNA-binding protein, putative n=... 506 e-141 UniRef50_A2DYG3 F/Y-rich N-terminus family protein n=1 Tax=Trich... 506 e-141 UniRef50_A8QAR1 Putative uncharacterized protein n=1 Tax=Malasse... 505 e-141 UniRef50_D0NRU9 Chromodomain protein, putative n=1 Tax=Phytophth... 505 e-141 UniRef50_Q7KU24 Chromodomain-helicase-DNA-binding protein 1 n=29... 504 e-141 UniRef50_UPI000180C4B7 PREDICTED: similar to helicase, lymphoid-... 504 e-141 UniRef50_D2VVJ6 Predicted protein n=1 Tax=Naegleria gruberi RepI... 504 e-141 UniRef50_B4PGH5 GE19602 n=3 Tax=Coelomata RepID=B4PGH5_DROYA 504 e-140 UniRef50_D0MSZ7 Chromodomain-helicase-DNA-binding protein, putat... 503 e-140 UniRef50_Q7RM86 Chromodomain-helicase-DNA-binding protein, CHD-1... 503 e-140 UniRef50_A2FGX6 SNF2 family N-terminal domain containing protein... 502 e-140 UniRef50_B3L200 SNF2-family protein, putative n=8 Tax=Eukaryota ... 502 e-140 UniRef50_D2V6Z5 SWI/SNF-related matrix-associated actin-dependen... 502 e-140 UniRef50_A9SY70 SNF2 family DNA-dependent ATPase n=2 Tax=Physcom... 501 e-140 UniRef50_P38144 ISWI chromatin-remodeling complex ATPase ISW1 n=... 501 e-140 UniRef50_C1LZY0 Chromodomain helicase DNA binding protein, putat... 501 e-140 UniRef50_Q23KF5 Type III restriction enzyme, res subunit family ... 501 e-140 UniRef50_Q9DGQ2 Chromodomain helicase DNA binding protein 1 (Fra... 500 e-140 UniRef50_UPI000180C7E1 PREDICTED: hypothetical protein n=1 Tax=C... 500 e-139 UniRef50_Q8SWP7 Similarity to CHROMODOMAIN HELICASE DNA-BINDING ... 500 e-139 UniRef50_O97159 Chromodomain-helicase-DNA-binding protein Mi-2 h... 499 e-139 UniRef50_C1E7E6 SNF2 super family n=2 Tax=Micromonas RepID=C1E7E... 499 e-139 UniRef50_Q8IJG6 Chromodomain-helicase-DNA-binding protein 1 homo... 499 e-139 UniRef50_O17909 Protein H06O01.2, partially confirmed by transcr... 498 e-139 UniRef50_Q8IIW0 PfSNF2L n=12 Tax=Eukaryota RepID=Q8IIW0_PLAF7 498 e-139 UniRef50_UPI0001926057 PREDICTED: similar to chromodomain helica... 497 e-139 UniRef50_C4LW36 Chromodomain-helicase-DNA-binding protein, putat... 497 e-138 UniRef50_A2QRG3 Contig An08c0130, complete genome n=9 Tax=Tricho... 495 e-138 UniRef50_A0C011 Chromosome undetermined scaffold_14, whole genom... 495 e-138 UniRef50_Q4UI59 SNF2-family protein (Chromodomain-helicase-DNA-b... 495 e-138 UniRef50_B9N3S4 Chromatin remodeling complex subunit n=4 Tax=Mag... 495 e-138 UniRef50_Q9XFH4 SWI2/SNF2-like protein n=22 Tax=Embryophyta RepI... 494 e-138 UniRef50_A0CVG3 Chromosome undetermined scaffold_29, whole genom... 494 e-138 UniRef50_A9V9Q4 Predicted protein n=1 Tax=Monosiga brevicollis R... 494 e-138 UniRef50_Q5CVY6 Brahma like protein with a HSA domain, SNF2 like... 494 e-138 UniRef50_Q54NM0 SNF2-related domain-containing protein n=1 Tax=D... 494 e-138 UniRef50_Q22516 Chromodomain-helicase-DNA-binding protein 3 homo... 494 e-137 UniRef50_Q9NRZ9 Lymphoid-specific helicase n=68 Tax=Coelomata Re... 492 e-137 UniRef50_UPI000034F14B chromatin remodeling factor, putative n=1... 492 e-137 UniRef50_B2VWL1 Chromodomain-helicase-DNA-binding protein 4 n=2 ... 492 e-137 UniRef50_A2EX18 F/Y-rich N-terminus family protein n=1 Tax=Trich... 492 e-137 UniRef50_B7G0W1 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 492 e-137 UniRef50_B3S405 Putative uncharacterized protein n=1 Tax=Trichop... 491 e-137 UniRef50_C9ZIW1 Transcription activator, putative n=7 Tax=Trypan... 491 e-137 UniRef50_B7G256 Predicted protein n=4 Tax=Eukaryota RepID=B7G256... 491 e-137 UniRef50_C1E0M1 SNF2 super family n=1 Tax=Micromonas sp. RCC299 ... 489 e-136 UniRef50_UPI000180CDBD PREDICTED: similar to helicase, lymphoid-... 489 e-136 UniRef50_C1DZK6 SNF2 super family n=2 Tax=Micromonas RepID=C1DZK... 487 e-136 UniRef50_A2DZY5 SNF2 family N-terminal domain containing protein... 487 e-136 UniRef50_Q7YYQ2 SNF2 helicase, possible n=4 Tax=Cryptosporidium ... 487 e-136 UniRef50_B6H510 Pc13g11770 protein n=2 Tax=Eurotiomycetidae RepI... 487 e-136 UniRef50_A2FSS0 SNF2 family N-terminal domain containing protein... 485 e-135 UniRef50_Q6CL05 KLLA0F06710p n=3 Tax=Saccharomycetaceae RepID=Q6... 484 e-134 UniRef50_C6CWR3 SNF2-related protein n=1 Tax=Paenibacillus sp. J... 482 e-134 UniRef50_Q4N784 DNA-dependent ATPase, putative n=4 Tax=Piroplasm... 482 e-134 UniRef50_Q8SUC5 Similarity to THE ATPase COMPONENT OF THE TWO-SU... 482 e-134 UniRef50_C5KXS0 Chromodomain helicase-DNA-binding protein, putat... 481 e-134 UniRef50_Q04692 SWI/SNF-related matrix-associated actin-dependen... 481 e-134 UniRef50_B2AYT1 Predicted CDS Pa_1_12130 n=6 Tax=Sordariomycetes... 481 e-134 UniRef50_C6PAC6 Non-specific serine/threonine protein kinase n=1... 480 e-133 UniRef50_B9LWH1 Helicase domain protein n=3 Tax=Halobacteriaceae... 480 e-133 UniRef50_C5KT21 Chromatin remodelling complex ATPase chain Iswi,... 479 e-133 UniRef50_UPI000186E785 lymphoid specific helicase, putative n=1 ... 479 e-133 UniRef50_B9PV27 Transcription regulatory protein SNF2, putative ... 477 e-132 UniRef50_B9LVL0 Helicase domain protein n=1 Tax=Halorubrum lacus... 477 e-132 UniRef50_Q2S6W0 Superfamily II DNA/RNA helicase, SNF2 family n=1... 477 e-132 UniRef50_D0MVY5 Chromatin-remodeling complex ATPase chain, putat... 476 e-132 UniRef50_C6N1M4 DNA helicase n=2 Tax=Legionella RepID=C6N1M4_9GAMM 475 e-132 UniRef50_A9TTS1 SNF2 family DNA-dependent ATPase (Fragment) n=1 ... 475 e-132 UniRef50_Q9H4L7 SWI/SNF-related matrix-associated actin-dependen... 475 e-132 UniRef50_B6K5R2 Chromodomain helicase hrp1 n=1 Tax=Schizosacchar... 475 e-132 UniRef50_B6KDR5 Chromatin remodeling complex protein SNF2L, puta... 474 e-132 UniRef50_C8NVD6 DNA/RNA helicase n=1 Tax=Corynebacterium genital... 474 e-132 UniRef50_UPI00016929C4 SWF/SNF family helicase n=1 Tax=Paenibaci... 474 e-132 UniRef50_B7P0R8 Helicase, putative (Fragment) n=1 Tax=Ixodes sca... 474 e-132 UniRef50_A1BFU1 SNF2-related protein n=3 Tax=Chlorobium/Pelodict... 474 e-132 UniRef50_A4S600 Predicted protein (Fragment) n=8 Tax=Eukaryota R... 474 e-131 UniRef50_Q47YP1 Snf2 family protein n=1 Tax=Colwellia psychreryt... 473 e-131 UniRef50_A2Q9U8 Contig An01c0310, complete genome n=12 Tax=Eurot... 472 e-131 UniRef50_B9MLI9 Non-specific serine/threonine protein kinase n=1... 472 e-131 UniRef50_B5Y557 Predicted protein (Fragment) n=2 Tax=Bacillariop... 472 e-131 UniRef50_A0BRC7 Chromosome undetermined scaffold_122, whole geno... 472 e-131 UniRef50_C7YQ78 SNF2 family chromodomain-helicase DNA-binding pr... 471 e-131 UniRef50_B6QF08 Chromatin remodeling complex subunit (Chd3), put... 471 e-131 UniRef50_Q67RQ1 SNF2 family helicase n=1 Tax=Symbiobacterium the... 470 e-130 UniRef50_B8P198 Predicted protein n=1 Tax=Postia placenta Mad-69... 469 e-130 UniRef50_A9UQT1 Predicted protein (Fragment) n=1 Tax=Monosiga br... 469 e-130 UniRef50_UPI000179149B PREDICTED: similar to predicted protein n... 469 e-130 UniRef50_C5KED9 Chromodomain helicase dna binding protein, putat... 468 e-130 UniRef50_C5LBZ9 DNA helicase, putative n=1 Tax=Perkinsus marinus... 468 e-130 UniRef50_B9XEI0 Non-specific serine/threonine protein kinase n=1... 468 e-130 UniRef50_D1JIN1 Putative uncharacterized protein rapA n=1 Tax=un... 467 e-130 UniRef50_Q8PWU7 SWF/SNF family helicase n=4 Tax=cellular organis... 467 e-130 UniRef50_UPI0000D56DCA PREDICTED: similar to helicase n=3 Tax=Ne... 467 e-130 Sequences not found previously or not previously below threshold: UniRef50_Q0UG06 Putative uncharacterized protein n=1 Tax=Phaeosp... 515 e-144 UniRef50_B6K540 ATP-dependent DNA helicase Snf22 n=1 Tax=Schizos... 513 e-143 UniRef50_B8P2U7 Predicted protein n=2 Tax=Agaricomycetes RepID=B... 498 e-139 UniRef50_A7RPD7 Predicted protein n=2 Tax=Cnidaria RepID=A7RPD7_... 496 e-138 UniRef50_UPI00006CC469 SNF2 family N-terminal domain containing ... 483 e-134 UniRef50_A8X9E2 C. briggsae CBR-LET-418 protein n=2 Tax=Caenorha... 483 e-134 UniRef50_P32657 Chromo domain-containing protein 1 n=12 Tax=Sacc... 482 e-134 UniRef50_Q6CDI0 YALI0C00363p n=2 Tax=Saccharomycetales RepID=Q6C... 482 e-134 UniRef50_Q4SNF1 Chromosome 8 SCAF14543, whole genome shotgun seq... 481 e-134 UniRef50_A9UYI8 Predicted protein n=1 Tax=Monosiga brevicollis R... 480 e-134 UniRef50_O14139 Chromodomain helicase hrp3 n=3 Tax=Schizosacchar... 477 e-132 UniRef50_Q7PDU2 Arabidopsis thaliana BRAHMA ortholog-related n=2... 474 e-131 UniRef50_A8PK99 Type III restriction enzyme, res subunit family ... 473 e-131 UniRef50_A5DW13 Chromo domain protein 1 n=10 Tax=Saccharomycetal... 470 e-131 UniRef50_B0D0U7 Chromodomain-helicase DNA-binding protein (Fragm... 470 e-130 UniRef50_B3RSE5 Putative uncharacterized protein n=1 Tax=Trichop... 468 e-130 UniRef50_Q5KBX3 Transcription regulator, putative n=2 Tax=Filoba... 467 e-129 >UniRef50_B7VIC2 RNA polymerase-associated protein rapA n=29 Tax=Gammaproteobacteria RepID=RAPA_VIBSL Length = 969 Score = 935 bits (2418), Expect = 0.0, Method: Composition-based stats. Identities = 600/969 (61%), Positives = 770/969 (79%), Gaps = 3/969 (0%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F LGQRWISDTES+LGLGTVVA+DARTVT++F ++ ENR+YAR+D+PVTRV FN GD Sbjct: 1 MTFALGQRWISDTESDLGLGTVVAMDARTVTVMFAASEENRVYARTDAPVTRVAFNVGDV 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I +GW + VEEV E+ GLLTY+GTR DT+E+ V LRE+FL +++ F+KPQD+L+AGQI Sbjct: 61 IECQEGWSLSVEEVIEDKGLLTYLGTREDTQETEVTLREIFLSNQIRFNKPQDKLYAGQI 120 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DRMD F LRYRA +Q + P GL G R LIPHQL IAH+VGRRHAPRVLLADEVG Sbjct: 121 DRMDNFVLRYRALSNQYQQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG 180 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMI+HQQ+LSG AER+LI+VPETLQHQWLVEM+RRFNL F++FD+ER E+ Sbjct: 181 LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIESFA 240 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 ++ NPFDT+Q V+CSLDF R+S++R E E EWDLLVVDEAHHL WS+D PSREYQ +E Sbjct: 241 ESDNPFDTQQYVLCSLDFLRKSRKRYEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE 300 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 LAE+ GVLLLTATPEQLG ESHFARLRLLDP+RF+D+ FVEE+ Y PVADAV L Sbjct: 301 GLAENTSGVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEDQYAPVADAVTALF 360 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSD--SEDAQSARQELVSMLMDRHGTSRVLF 418 +G KL N N + E++ EQD+EPL + D E+ ARQEL+ LMDRHGT RVLF Sbjct: 361 SGVKLENSAKNQITELLSEQDVEPLFRVIEGDSSEEEQALARQELIDNLMDRHGTGRVLF 420 Query: 419 RNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 RNTR +KGFPKR ++ + + +PTQY T+++VSG++G + + E RA MLYPE I+QEFE Sbjct: 421 RNTRAAIKGFPKRNVNLLPMDIPTQYTTSMRVSGMIGGKMAPEARAMKMLYPEEIFQEFE 480 Query: 479 GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 G++++WW FD RV WL+ + RS+K+LVI ++A+TALQLEQ LREREG+RA VFHEGM Sbjct: 481 GEDSSWWQFDSRVNWLIEKIQDKRSEKILVIASRASTALQLEQALREREGVRATVFHEGM 540 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 SI+ERD+AAA+FA+E+ GAQVL+CSEIGSEGRNFQFA+ +VMFDLPFNPDLLEQRIGRLD Sbjct: 541 SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD 600 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ DI IHVPYL+ T+Q++L RW+ EGL+AF TCPTGRT+YD + LI LAS Sbjct: 601 RIGQLRDIDIHVPYLKGTSQAILARWFDEGLNAFAETCPTGRTVYDKYSDVLIEMLASG- 659 Query: 659 QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF 718 TE D++I+ + +++LK+ LE+GRDRLLE+HSNGG+KA +AE I D DTNL+ F Sbjct: 660 NTEQLDEVIEESAKLNQSLKSDLEKGRDRLLEMHSNGGDKAHEIAEKIASTDGDTNLVTF 719 Query: 719 AMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFIT 778 A++LFD IG+NQDD+G+N +V+TPS+HM+VP +PGL +G TITFDRE AL+RED FI+ Sbjct: 720 ALSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRETALSREDMNFIS 779 Query: 779 WEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPP 838 WEHP+I+ G+DL+LS G+S +SLLKNKALPVGT+L+EL+Y+V+AQAPK+ +++FLP Sbjct: 780 WEHPMIQGGIDLLLSEGVGASAVSLLKNKALPVGTILLELVYLVDAQAPKRSGISQFLPK 839 Query: 839 TPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKS 898 TP+R+++D GN+L+AQVEF++FNRQL+ VNRH SKLVN+VQ ++H +++ GE + Sbjct: 840 TPIRLMMDGRGNDLSAQVEFDSFNRQLSPVNRHLASKLVNSVQGEIHKLIEAGETHVLPK 899 Query: 899 ARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLD 958 + A+ + L+ EL RL+AL+AVNPNIRD+EL IE+ ++ + +A +LD Sbjct: 900 VEEVRQQAQKDMQTNLNGELERLQALKAVNPNIRDEELEVIEAQINELTGYISKAQVQLD 959 Query: 959 ALRLIVVTH 967 +LRLIVV+H Sbjct: 960 SLRLIVVSH 968 >UniRef50_A7MSB2 RNA polymerase-associated protein rapA n=212 Tax=Gammaproteobacteria RepID=RAPA_VIBHB Length = 969 Score = 933 bits (2411), Expect = 0.0, Method: Composition-based stats. Identities = 606/969 (62%), Positives = 772/969 (79%), Gaps = 3/969 (0%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F LGQRWISDTES+LGLGTVVA+DARTVTL+F ++ ENR+YAR+D+PVTRV FN GD Sbjct: 1 MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFAASEENRVYARNDAPVTRVTFNVGDV 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I +GW ++VEEV E+ GL TY GTR DT+E+ + LRE+FL + + F+KPQD+L+AGQI Sbjct: 61 IDCQEGWSLKVEEVLEDEGLYTYFGTREDTQETAIVLREIFLSNHIRFNKPQDKLYAGQI 120 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DRMD F LRYRA + EQ + P GL G R LIPHQL IAH+VGRRHAPRVLLADEVG Sbjct: 121 DRMDNFVLRYRALQNQFEQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG 180 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMI+HQQ+LSG AER+LI+VPETLQHQWLVEM+RRFNL F++FD+ER EA Sbjct: 181 LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA 240 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 +A NPFDT+Q V+CSLDF R+S++R E E EWDLLVVDEAHHL WS+D PSREYQ +E Sbjct: 241 EAENPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE 300 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 LAE GVLLLTATPEQLG ESHFARLRLLDP+RF+D+ FVEE++ Y PVADA+ L Sbjct: 301 GLAERTAGVLLLTATPEQLGRESHFARLRLLDPDRFYDYDAFVEEEEQYAPVADAITSLF 360 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQS--ARQELVSMLMDRHGTSRVLF 418 +G KL ++ N + E++ EQD+EPL + SDS++ ARQEL+ LMDRHGT RVLF Sbjct: 361 SGEKLPDEAKNQITELLSEQDVEPLFRIIESDSDEEAKASARQELIDNLMDRHGTGRVLF 420 Query: 419 RNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 RNTR +KGFPKR +H + + +P QY T+++VSG++G + + E RA LYPE I+QEFE Sbjct: 421 RNTRAAIKGFPKRNVHLMPMDIPQQYTTSMRVSGMIGGKMTPEARAVKNLYPEEIFQEFE 480 Query: 479 GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 G++++WW FD RV WL+ + RS KVLVI ++A+TALQLEQ LREREGIRA VFHEGM Sbjct: 481 GEDSSWWQFDSRVNWLLEKVKEKRSDKVLVIASRASTALQLEQALREREGIRATVFHEGM 540 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 SI+ERD+AAA+FA+E+ GAQVL+CSEIGSEGRNFQFA+ +VMFDLPFNPDLLEQRIGRLD Sbjct: 541 SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD 600 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ DI IHVPYL+ T+Q++L RW+ EGL+AF TCPTGR +YD + LI LAS D Sbjct: 601 RIGQKRDIDIHVPYLKDTSQAILARWFDEGLNAFAETCPTGRAVYDKYSDALIEMLASGD 660 Query: 659 QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF 718 + D++I+ + ++ LK+QLEQGRDRLLE+HSNGGEKAQ + E I D DTNL+ F Sbjct: 661 VS-NLDEVIEESAKMNKELKSQLEQGRDRLLEMHSNGGEKAQQIVEKISSTDGDTNLVTF 719 Query: 719 AMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFIT 778 A++LFD IG+NQDD+G+N +V+TPS+HM+VP +PGL +G TITFDR+ AL+RED FI+ Sbjct: 720 ALSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMHFIS 779 Query: 779 WEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPP 838 WEHP+I+ G+DL++S G+S +SLLKNKALPVGT+L+EL+Y V+AQAPK+ + RFLP Sbjct: 780 WEHPMIQGGIDLLMSEGVGTSAVSLLKNKALPVGTILLELVYAVDAQAPKRSGITRFLPK 839 Query: 839 TPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKS 898 TP+RM++D GN+L+ QVEFE FNRQL+ VNRH GSKLV +VQ+D+H++++ G+A +E+ Sbjct: 840 TPIRMMMDARGNDLSPQVEFEGFNRQLSPVNRHLGSKLVTSVQKDIHSLIEAGDALVEQK 899 Query: 899 ARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLD 958 + A + + L+AEL RL+AL+AVNPNIRD+E+ +IE +++ ++QA +LD Sbjct: 900 VEEVRKQAHQDMQQSLNAELERLQALKAVNPNIRDEEIESIEEQIKELTGYINQAQVQLD 959 Query: 959 ALRLIVVTH 967 +LRLIVV+H Sbjct: 960 SLRLIVVSH 968 >UniRef50_A1RFP5 RNA polymerase-associated protein rapA n=21 Tax=Gammaproteobacteria RepID=RAPA_SHESW Length = 968 Score = 909 bits (2349), Expect = 0.0, Method: Composition-based stats. Identities = 555/970 (57%), Positives = 748/970 (77%), Gaps = 6/970 (0%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 MPF LGQRWISDTESELGLGTVV V+ R VT+LFP+TGENR+++R+++P+TRV +NPGDT Sbjct: 1 MPFALGQRWISDTESELGLGTVVQVEGRMVTVLFPATGENRMFSRAEAPLTRVTYNPGDT 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 + SH+GW + +E++ E++GL+ Y G +T E V LRE L+ + F+KPQDRLFAGQI Sbjct: 61 VESHEGWSLTIEDLTEKDGLVIYHGIHSETGEQ-VTLRETLLNHNIRFNKPQDRLFAGQI 119 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DR+DRF +RY+ + + GL+G R LIPHQ+ IAH+VGRR+APRVLLADEVG Sbjct: 120 DRLDRFGVRYQCQMLRHKLATSDLLGLQGPRVGLIPHQMWIAHEVGRRYAPRVLLADEVG 179 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAG+I+HQQLL+G AERVL+IVP+TL+HQWLVEMLRRFNLRF++FD++R EA Sbjct: 180 LGKTIEAGLIIHQQLLTGRAERVLVIVPDTLRHQWLVEMLRRFNLRFSVFDEDRCVEAYA 239 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 D NPF TEQLVICSL+ R+ K+RL+ +A+WDLLVVDEAHHL W+E+APSR YQ +E Sbjct: 240 DHDNPFYTEQLVICSLELLRK-KKRLDQALDADWDLLVVDEAHHLEWTEEAPSRAYQVVE 298 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 L+E VPGVLLLTATP+QLG ESHFARLRLLDP+RF+D+ F+ E+ +Y+ VA A L Sbjct: 299 ALSEVVPGVLLLTATPDQLGHESHFARLRLLDPDRFYDYDAFLAEENSYKDVAIAAEALA 358 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSD---SEDAQSARQELVSMLMDRHGTSRVL 417 KL + +N L E++ E+DI P ++ +D S+ Q+AR EL+ L+DRHGT RVL Sbjct: 359 GNAKLPDAAINSLTELLSEKDIAPSIRLIQADGIDSDVQQAARSELLQELLDRHGTGRVL 418 Query: 418 FRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEF 477 +RN+R VKGFPKR + +P QY TA +VS +MG K+ E +A L PE++YQEF Sbjct: 419 YRNSRASVKGFPKRFFNPHPQTMPEQYLTAARVSSMMGGHKTLEAKAAQALSPEKLYQEF 478 Query: 478 EGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEG 537 E ++A+WW FDPRV+WL+ +L SHRS+KVL+I ++A TAL LE+ LR REGI+A VFHEG Sbjct: 479 EDNSASWWKFDPRVDWLIAFLKSHRSKKVLIIASQAETALSLEEALRTREGIQATVFHEG 538 Query: 538 MSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL 597 MSIIERD+A A+FA+E+ GAQ L+CSEIGSEGRNFQFASH+V+FDLP NPDLLEQRIGRL Sbjct: 539 MSIIERDKAGAYFAQEEGGAQALICSEIGSEGRNFQFASHLVLFDLPLNPDLLEQRIGRL 598 Query: 598 DRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASP 657 DRIGQ +DIQIH+PYLE TAQ L++WYH+GL+AFE TCP+G +Y DL+N L Sbjct: 599 DRIGQKNDIQIHLPYLEDTAQERLMQWYHQGLNAFELTCPSGHVLYAEFAEDLLNVLVGD 658 Query: 658 DQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIA 717 D E +L+ + + +++ LK +EQGRD+LLEI+S+GG++A+A+ E + + D++T LI Sbjct: 659 DADE-LTNLLNHTQSRYKELKHAMEQGRDKLLEINSHGGDRAKAIVERLAQNDENTQLIG 717 Query: 718 FAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFI 777 + L+DIIG++Q+D+G+N I+L PS+HM+ P +PGL EDG+T+TFDR+ AL+R+D I Sbjct: 718 SVIRLWDIIGVDQEDKGENSIILRPSEHMMFPTYPGLPEDGVTVTFDRDTALSRDDIALI 777 Query: 778 TWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLP 837 T EHPL++ GLDLI +TG++++++LKNKALP GTL +ELIY+ +A APK QL R+LP Sbjct: 778 TQEHPLVQTGLDLITGSETGTTSVAVLKNKALPAGTLFLELIYMADASAPKSSQLYRYLP 837 Query: 838 PTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEK 897 PTP+R+LLDKNGN+L+A+V++ +F++QL+AVNRH G KLV A Q +H + GE + Sbjct: 838 PTPIRILLDKNGNDLSAKVDYASFDKQLSAVNRHIGGKLVTASQPILHPLFAKGEEYAQA 897 Query: 898 SARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRL 957 + L+ AR + +L+ EL RLE+L+AVNPNIR++EL + + Q++ LD + +L Sbjct: 898 AVDELVIQAREKMTTQLTGELDRLESLKAVNPNIREEELEYLRNQMQELNTYLDASQLQL 957 Query: 958 DALRLIVVTH 967 DA+R+++V+H Sbjct: 958 DAIRMVLVSH 967 >UniRef50_A3MZ32 RNA polymerase-associated protein rapA n=32 Tax=Gammaproteobacteria RepID=RAPA_ACTP2 Length = 969 Score = 882 bits (2279), Expect = 0.0, Method: Composition-based stats. Identities = 553/977 (56%), Positives = 712/977 (72%), Gaps = 18/977 (1%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 F +GQRWIS++E+ LGLG V A D RTVT+ FP+ E R+YA S +P+TRV F GD I Sbjct: 1 MFVVGQRWISESENNLGLGIVTASDNRTVTIQFPAAEEERIYALSVAPLTRVQFQKGDRI 60 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 S +GWQ+ VEEV E G + Y+G R D+ E L E+ LD K+ FSKPQDRLF+ QID Sbjct: 61 NSVEGWQLDVEEVVENQGFIIYLGKRADSGEE-AVLPEMQLDHKVSFSKPQDRLFSAQID 119 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 R DRFALRYRA ++ QF+ P G+RG R SLIPHQL+IA +VG+R APRVLLADEVGL Sbjct: 120 RSDRFALRYRALQHQQAQFQSPLRGMRGIRASLIPHQLHIAKEVGQRVAPRVLLADEVGL 179 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEAGMIL QQL SG ERVL++VPE+LQHQWLVEMLRRFNL+F+LFD+ER ++ Sbjct: 180 GKTIEAGMILQQQLFSGRVERVLVLVPESLQHQWLVEMLRRFNLKFSLFDEERCSDFDKA 239 Query: 242 -------AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSR 294 + NPFD+E LVI S+D+ S R + + + WD+L+VDEAHHL WSE+ PS Sbjct: 240 DEDGNDVSENPFDSEALVIASIDWLESSPNRAKQVLASHWDMLIVDEAHHLAWSENEPSV 299 Query: 295 EYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVAD 354 YQ +E+L++ P VLLLTATPEQLG ESHFARL LLD +RF+D+ F+ EQK+Y+PVAD Sbjct: 300 GYQFVERLSKQTPAVLLLTATPEQLGQESHFARLALLDADRFYDYHSFIAEQKDYKPVAD 359 Query: 355 AVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDA---QSARQELVSMLMDRH 411 AVA LL LS+DE N + E++ E+D EP+ + NS+ RQEL+ L+DRH Sbjct: 360 AVATLLNDKPLSHDEQNSIAELLSEKDTEPMFKVINSEKSKENDRLQVRQELIRELIDRH 419 Query: 412 GTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE 471 GTSRVLFRNTR GVKGFP R H I L +P+QY A+KV G+MG D LYPE Sbjct: 420 GTSRVLFRNTRQGVKGFPHRVYHQITLEMPSQYTNALKVMGMMGGVTK-----DDQLYPE 474 Query: 472 RIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRA 531 R++Q A W +FDPR+EWL+ +L +HR +K+LVIC +A TA+ LEQ+LRERE IR+ Sbjct: 475 RLFQRMN-PAAKWADFDPRIEWLITFLKNHRDEKILVICKQADTAIALEQILREREAIRS 533 Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLE 591 AVFHE MSI+ERDRA+A+FA+ + GAQVL+ S IGSEGRNFQFAS++V+F+LP NPDLLE Sbjct: 534 AVFHEKMSIVERDRASAYFAQMEEGAQVLISSSIGSEGRNFQFASNLVLFNLPDNPDLLE 593 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI 651 Q IGRLDRIGQ +DIQIHVP E + Q VL WYH+GL+AFE TCP G ++ +L Sbjct: 594 QSIGRLDRIGQKNDIQIHVPCFENSMQMVLATWYHQGLNAFEETCPMGAALFREFGEELE 653 Query: 652 NYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDD 711 +L +P Q GFD+ + ++ + LKA+LEQGRDRLLE++SNGGE AQALAE+I ++D+ Sbjct: 654 GFLKNP-QAVGFDEFLVRTFKRQQQLKAELEQGRDRLLELNSNGGEVAQALAEAIAKEDN 712 Query: 712 DTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAR 771 + +L+ FA++LFD+IG+ Q+D G+ IV++P+ HMLVPDFPG++ED T+TFDR++AL R Sbjct: 713 NPHLVNFALSLFDVIGLEQEDLGEQSIVISPTGHMLVPDFPGIAEDSTTVTFDRQLALMR 772 Query: 772 EDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQ 831 ED +F+TW+HP+IRNG+DLI SGD G S ISLL NK LP GTLL+E IY+VE QAPK L Sbjct: 773 EDVEFLTWDHPMIRNGIDLITSGDIGKSAISLLINKHLPAGTLLLEAIYMVETQAPKGLN 832 Query: 832 LNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLG 891 L RFLPPTPVR+LL GN++AAQV F +QL VN+ +K+ Q D+ ++ + Sbjct: 833 LTRFLPPTPVRILLGNKGNDMAAQVSFTGLEKQLKPVNKQMANKIAKMAQADIKKLIDIS 892 Query: 892 EAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLD 951 E +I LI+ A +AD LSAEL RL +L+AVN NIR DE+ A+E R + ++ + Sbjct: 893 EQKIAAKLPELIEKASQDADSTLSAELYRLTSLQAVNKNIRADEIEALEQQRIESLKQIA 952 Query: 952 QAGWRLDALRLIVVTHQ 968 A WRLD+LR+IV + Sbjct: 953 LANWRLDSLRVIVSNKE 969 >UniRef50_C6AQR6 RNA polymerase-associated protein RapA (ATP-dependenthelicase hepA) n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6AQR6_AGGAN Length = 952 Score = 851 bits (2199), Expect = 0.0, Method: Composition-based stats. Identities = 503/972 (51%), Positives = 667/972 (68%), Gaps = 24/972 (2%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F +GQRWIS+TE+ LGLG + AVD R VT+ FP+ E R+YA +P++RV F GD Sbjct: 1 MAFAIGQRWISETENNLGLGVISAVDFRQVTIDFPAAQEQRIYAVQSAPLSRVQFRLGDQ 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 + +GW +V V E NGLL Y+ + E+ L ++ FS+PQ+RLF QI Sbjct: 61 VQHIEGWHGEVTNVAENNGLLFYLVQP--QAGQDRVVSEMELAHRISFSRPQERLFFAQI 118 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DR + F LRY A +Y QF+ P GLRG LIPHQL+IA + G+R PRVLLADEVG Sbjct: 119 DRNEHFVLRYHALQYQKAQFQSPLRGLRGIHAGLIPHQLHIAKEAGQRVTPRVLLADEVG 178 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAE--- 237 LGKTIEAGMIL QQL + RVLIIVPETLQHQWLVEMLRRFN F+LFD+ER A+ Sbjct: 179 LGKTIEAGMILQQQLFAEKVRRVLIIVPETLQHQWLVEMLRRFNFHFSLFDEERCADFAA 238 Query: 238 -AQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREY 296 + NPF TE L+IC+LD+ + QR++ L AE+D+L+ DE HHL++ E PS EY Sbjct: 239 TEDREEVNPFTTESLIICALDWLVQHPQRVQQLLAAEFDMLIADEVHHLLYDEINPSLEY 298 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAV 356 Q ++QL + +P VLLLTATPEQLG +SHFARL LLDP+RFHD+ F+EEQ++Y+P+A+A Sbjct: 299 QLVQQLTQQIPAVLLLTATPEQLGQQSHFARLNLLDPHRFHDYRAFLEEQQHYQPIAEAA 358 Query: 357 AMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRV 416 LLA LS E N + ++GE D + ++ L+ L+DRHGT R+ Sbjct: 359 QSLLANKPLSAVEKNKISALLGE------------DINFNGTNKETLIKQLIDRHGTGRL 406 Query: 417 LFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQE 476 LFRNTR V+GFPKR + I LP P QY+ + I R E + LYPE +E Sbjct: 407 LFRNTRQSVQGFPKRIYYPIALPQPKQYE-----NAIKTLRAFDEHPVQCALYPEHFMRE 461 Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 + A WW FDPRV+WL+ +L HR +KV VIC A TA+QLEQ+LRE+EGIR+AVFHE Sbjct: 462 LNANTA-WWEFDPRVQWLIDFLKQHRQEKVFVICRYAGTAIQLEQILREKEGIRSAVFHE 520 Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 MSI+ERDRAAA+F +++ AQVLL S IGSEGRNFQFAS +V+F+LP NPDLLEQ IGR Sbjct: 521 KMSIVERDRAAAYFTQQENAAQVLLSSNIGSEGRNFQFASRLVLFNLPENPDLLEQCIGR 580 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS 656 LDRIGQ DIQI++PY AQ+ L WYH GL+AF TCP G +++ L L + Sbjct: 581 LDRIGQTKDIQIYLPYFTDGAQATLADWYHLGLNAFNETCPMGALLFEQFGEALQKTLEN 640 Query: 657 PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLI 716 P E LI++ +++ LK LEQGRD LLE++SNGGE A+ LA+ I QD L+ Sbjct: 641 PTALEAQKALIEHTQQERLRLKQLLEQGRDLLLELNSNGGESAKQLAQEIAAQDGSPELV 700 Query: 717 AFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQF 776 FA+NLFD+IG+ Q+D G+ IV+TP+ MLVP+FPGL E+G+T+TFDR++ALARE+ +F Sbjct: 701 DFALNLFDVIGVEQEDLGEKSIVITPTGTMLVPEFPGLKEEGVTVTFDRQLALAREELEF 760 Query: 777 ITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFL 836 +TW+HP+I +G+DLI SGD G S ++LL NK LP GTLL+EL+YVVE QAP+ LQL RFL Sbjct: 761 LTWDHPMIYHGIDLITSGDIGKSAVALLPNKHLPAGTLLLELVYVVETQAPQGLQLTRFL 820 Query: 837 PPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIE 896 PPTP+R+LLD GN+LA QV F+ R+L ++R+ +K+ ++ ++ ++ GE + Sbjct: 821 PPTPIRLLLDSKGNDLAQQVVFDHLQRKLKPMDRNMANKVAKMLRPNIETLITQGEKVMA 880 Query: 897 KSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWR 956 + ++ +I A +A + L EL+RL ALR VN NIR DE+ +++ R+Q+++ L QA WR Sbjct: 881 QQSKEIIANAEQQARQHLDEELTRLIALRKVNKNIRQDEIDTLQTQRKQMLQCLQQATWR 940 Query: 957 LDALRLIVVTHQ 968 LD LR+IV + Sbjct: 941 LDCLRVIVTNKE 952 >UniRef50_Q2SC88 Superfamily II DNA/RNA helicase, SNF2 family n=2 Tax=Gammaproteobacteria RepID=Q2SC88_HAHCH Length = 967 Score = 849 bits (2193), Expect = 0.0, Method: Composition-based stats. Identities = 442/979 (45%), Positives = 593/979 (60%), Gaps = 33/979 (3%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 F +GQRWIS+TE ELGLG + D R +T+ FP+ E R Y+ +++P++RV + GD + Sbjct: 8 NFVIGQRWISNTEPELGLGIITENDNRRITISFPAATEQRTYSAANAPLSRVQYQVGDNV 67 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 + +D + V V E+ G L Y LD + V L E+ L S + F P+DRLF+GQ+D Sbjct: 68 SDNDEKKYTVAGVIEQQGYLIYEA--LDEKGRKVDLPELELSSFVHFVSPKDRLFSGQVD 125 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 ++ + LR Y + Q GL G R L+PHQ+ IA++V RHAPRVLLADEVGL Sbjct: 126 KLSSYLLRQETLGYQTRQQATQGYGLMGARVQLLPHQMYIANEVAHRHAPRVLLADEVGL 185 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEAG+ILH QLLSG A+RVLI+VPE+L HQWLVEMLRRFNL+F++ D+ER Sbjct: 186 GKTIEAGLILHHQLLSGRAQRVLIVVPESLLHQWLVEMLRRFNLQFSILDNERCEALTES 245 Query: 242 AY-NPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 NPF+ QLV+CSL+F + Q EH A+WD+LVVDEAHHL WS + S Y IE Sbjct: 246 GEENPFECSQLVLCSLNFITDNDQWREHALNAQWDMLVVDEAHHLEWSPEQQSPAYSHIE 305 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 LA+ PG+LLLTATPEQLG+ESHFARLRLLDP R+HD +F EE+ Y+PV D V LL Sbjct: 306 ALAQKAPGLLLLTATPEQLGLESHFARLRLLDPARYHDLERFREEESQYQPVNDLVKELL 365 Query: 361 AGNKLSN-----DELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQEL--------VSML 407 + + D L + +G+ ++ LL N + DA +E V L Sbjct: 366 GESGPTRLLDSQDLQAKLADYLGQDAVDKLLAELNQFAVDADEDSREEALHRVERAVRKL 425 Query: 408 MDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDM 467 +D+HG RVLFRNTR+ +KGFP+R LH LP P + T + + Sbjct: 426 LDQHGVGRVLFRNTRSAIKGFPQRILHLHPLPQPEELATLSASASLE-----------QR 474 Query: 468 LYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLRERE 527 L+PER+ A W D RVEWL +L +R +KVLVICA A TAL LE LR R Sbjct: 475 LHPERLL------GAEWVKTDSRVEWLAQWLKQNRQEKVLVICAHAETALDLEDFLRLRG 528 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNP 587 G R AVFHEG+S++ERDRA A+FA+++ GAQ L+CSEIGSEGRNFQFA H+V+FDLP NP Sbjct: 529 GYRTAVFHEGLSLLERDRAGAYFADDEYGAQALICSEIGSEGRNFQFARHLVLFDLPQNP 588 Query: 588 DLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVY 647 DLLEQRIGRLDRIGQ HD+ IHVP+ E +AQ L+RW++EG++AF CP G IY Sbjct: 589 DLLEQRIGRLDRIGQRHDVNIHVPFFENSAQERLLRWHNEGINAFSRPCPAGAAIYQRFA 648 Query: 648 NDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIE 707 L + L D + F+ LI + + E L+QGRD LLE++S KA L E I Sbjct: 649 VRLESELEQTDDRDEFNQLIADTHQFTEETLQALQQGRDPLLELNSCDPLKANDLVEQIV 708 Query: 708 EQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREV 767 E + L + +F G++Q+ + + P DHM FPGL EDG+T TF R++ Sbjct: 709 EDERRKELEDYIERVFSQYGVDQEQHSERAYIFRPGDHMQCSHFPGLPEDGVTATFHRDL 768 Query: 768 ALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAP 827 AL+R+D QF+TWEHP++ LD+IL G+ G++ + +K L G L+VE I+ + AP Sbjct: 769 ALSRDDMQFLTWEHPIVTGALDMILCGEFGNTGLCTIKLPPLQPGALMVETIFRLNCPAP 828 Query: 828 KQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAI 887 K LQL RFLP PVR+L+D +G L + + V + T LV + + + Sbjct: 829 KALQLYRFLPKEPVRLLIDSSGKELGQILTAAHLQQLGENVPKRTAQDLVRHARAQIEPL 888 Query: 888 LQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVM 947 + E L++ + E E+ RL+AL VNPNIR DE+ + + + Sbjct: 889 ITKAEKTAAAQKSELVERSIATMLESQQTEIERLKALAEVNPNIRQDEIDFLIQQTETLE 948 Query: 948 ESLDQAGWRLDALRLIVVT 966 + L A LDA+R+++ T Sbjct: 949 KYLKGAQLTLDAVRVVIAT 967 >UniRef50_B3PHI1 RNA polymerase-associated protein HepA n=2 Tax=Gammaproteobacteria RepID=B3PHI1_CELJU Length = 977 Score = 842 bits (2176), Expect = 0.0, Method: Composition-based stats. Identities = 450/991 (45%), Positives = 611/991 (61%), Gaps = 46/991 (4%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 F +GQRWIS+ E +LGLG V+ V R +TL FP+ GE R YA ++PV+RV + G+T+ Sbjct: 5 QFVIGQRWISEAEVDLGLGIVLDVANRRLTLSFPAAGERRTYALDNAPVSRVKYEVGETV 64 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 DG ++++ ++ E+ G L Y+G D EE A+ E LDS + FS P++RLFAGQID Sbjct: 65 RHQDGTRIKITKIVEQAGCLMYVGLTKDQEE--FAIPEFELDSFVQFSTPRERLFAGQID 122 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 + + F LRY+ Y + PY GL G R L+PHQL IA +V +RHAPRVLLADEVGL Sbjct: 123 KHEHFFLRYQTLHYQHQHRHSPYFGLAGPRVQLLPHQLYIAGEVAQRHAPRVLLADEVGL 182 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY------ 235 GKTIEAG++LHQQLLSG +R LI+VP +LQHQWLVEMLRRFNL F L D+ R Sbjct: 183 GKTIEAGLVLHQQLLSGRIKRALIVVPASLQHQWLVEMLRRFNLSFTLLDEARCNALVGL 242 Query: 236 ----------------AEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVV 279 E + ++ NPF++ QLV+CSLDF + R + A WDLL+V Sbjct: 243 DSQEESVDYVDDFEDDTEHRANSENPFESAQLVLCSLDFLTDNPVRYQQAVAAGWDLLLV 302 Query: 280 DEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDF 339 DEAHHL WS S Y IE LA G+LLLTATPEQLG+ESHFARLRLLDP+R++D Sbjct: 303 DEAHHLQWSPGHVSAAYACIEGLARVARGLLLLTATPEQLGLESHFARLRLLDPDRYYDL 362 Query: 340 AQFVEEQKNYRPVADAVAMLLAGNK-----LSNDELNMLGEMIGEQDIEPLLQAANSDSE 394 F EQ++Y+P+ D V LL LS+ ++ L + + L Q SDS Sbjct: 363 DAFKAEQQSYKPLNDLVQDLLQARDADAGTLSDSQVGALKGYLPVGTLVQLKQQIASDS- 421 Query: 395 DAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIM 454 SA ++ L+DRHGT RVLFRNTRN V GFP R+LH L L Q + + Sbjct: 422 -FASAVDTAITCLLDRHGTGRVLFRNTRNSVSGFPGRQLHGYALDLGDDEQAFVDQPLVA 480 Query: 455 GARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAA 514 R ++ A WW D RV WL +L ++ +KVLVICA A Sbjct: 481 QIRAETFWHSK--------------TQADWWLQDGRVTWLADWLKQNKRKKVLVICASAD 526 Query: 515 TALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQF 574 TA LE+ LR R+GI +VFHE MS+IERDR+AA+FA+ + GAQVL+CSEIGSEGRNFQF Sbjct: 527 TAQTLEEYLRLRKGILTSVFHEHMSLIERDRSAAYFADLEEGAQVLICSEIGSEGRNFQF 586 Query: 575 ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEH 634 A +V+FDLP NPDLLEQRIGRLDRIGQ + IHVP+ TAQ+ L+ WYH+GL+AFE Sbjct: 587 AQDLVLFDLPINPDLLEQRIGRLDRIGQTGTVNIHVPFFRGTAQARLLDWYHQGLNAFEK 646 Query: 635 TCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSN 694 TC G+ +Y ++L+ L + + F+ L+ R +AL QL+QGRDRLLE++S Sbjct: 647 TCAIGQAVYSRFADELLPALV-GQEPQVFEALLSTTRAHAQALLEQLQQGRDRLLELNSC 705 Query: 695 GGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGL 754 ++AQ L +++ + D L + ++FD GI+ D ++ +VL PSDHM + FPGL Sbjct: 706 KPQQAQQLVDALADNDQHPALANYMESVFDCFGIDMDRHSEHSLVLHPSDHMRIEQFPGL 765 Query: 755 SEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTL 814 E G+TIT+ R+ AL+RED QF+TWEHPL+R DLI+ + G++ LK L G L Sbjct: 766 PESGLTITYQRQQALSREDMQFLTWEHPLVRGAQDLIVLSEFGNTAFCTLKLPPLKPGNL 825 Query: 815 LVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGS 874 LVE ++V+ AP +LQL+RF+P + +R+LLD G +L+A + +R + V R+ Sbjct: 826 LVEALFVLHCPAPAELQLSRFIPQSVIRVLLDDKGKDLSAVLNVAQLSRLVQKVPRNNAQ 885 Query: 875 KLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDD 934 +LV + + I+ E + + LI+ A+ L+ E+ RL+AL VNPN+R + Sbjct: 886 ELVRHARPQLTEIIHKAEQVTQANQAGLIENAKAAVATHLNTEIDRLKALAEVNPNVRQE 945 Query: 935 ELTAIESNRQQVMESLDQAGWRLDALRLIVV 965 E+ ++ L A RLD+LR+++ Sbjct: 946 EIQYLQERLAASQHFLGLAKVRLDSLRVVMT 976 >UniRef50_A5UAT0 RNA polymerase-associated protein rapA n=16 Tax=Haemophilus influenzae RepID=RAPA_HAEIE Length = 923 Score = 836 bits (2161), Expect = 0.0, Method: Composition-based stats. Identities = 508/971 (52%), Positives = 681/971 (70%), Gaps = 51/971 (5%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 MPF +GQRW+S++E+ LGLG + A+D RTVT+ FP+ E R+YA + +P++R++F+ G+T Sbjct: 1 MPFAIGQRWLSESENALGLGVITALDQRTVTIYFPAADETRIYAIAQAPLSRIVFSKGET 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 ++ GWQ ++ +V+ NGLL Y+ ++ V ++E + + FS+ +DRLF+ QI Sbjct: 61 LSHQAGWQGEILDVQNMNGLLFYLVKNP--QDEDVIVQERDISPIISFSQAKDRLFSAQI 118 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 DR FALRYR + QF+ P GLRG R LIPHQL+IA +VG R PRVLLADEVG Sbjct: 119 DRSTHFALRYRTLCHQQAQFKSPLRGLRGTRAGLIPHQLHIAAEVGNRVNPRVLLADEVG 178 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMIL QL + +RVLIIVPETLQHQWLVEMLRRFNL FALFD+ER + Sbjct: 179 LGKTIEAGMILQNQLFAEKVQRVLIIVPETLQHQWLVEMLRRFNLHFALFDEERCNDFDL 238 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 DA NPF TE L+ICSL++ R+E +A++D L+VDEAHHLVWSE +PS Y +E Sbjct: 239 DAVNPFTTESLIICSLNWLETHPNRVEQALDAQFDCLIVDEAHHLVWSETSPSAAYLFVE 298 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 QLA +P VLLLTATPEQLG ESHFARLRLLDP RF D+ FV+EQ++Y+PV +AV LL Sbjct: 299 QLARIIPSVLLLTATPEQLGQESHFARLRLLDPERFFDYQTFVKEQEHYQPVVNAVESLL 358 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAA-NSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 A LS E N + +++ EQD+EPL +A +++ E+ Q ARQEL+ L+DRHGT R+LFR Sbjct: 359 ANKALSAVEKNHISDLLLEQDVEPLFKAIASNNDEEQQRARQELIQALIDRHGTGRMLFR 418 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 NTR GVKGFP R H I L Sbjct: 419 NTRQGVKGFPHRVYHQITLS---------------------------------------- 438 Query: 480 DNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMS 539 + +++WL+ +L HR +K+ VIC AATA+QLEQ+LRERE IRAAVFHE MS Sbjct: 439 ------EENDKIDWLIDFLKLHRDEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMS 492 Query: 540 IIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDR 599 IIERDRAAA+FA+ + GAQVLL S IGSEGRNFQFA+++V+FDLP NPDLLEQ IGRLDR Sbjct: 493 IIERDRAAAYFADLENGAQVLLSSSIGSEGRNFQFAANLVLFDLPTNPDLLEQCIGRLDR 552 Query: 600 IGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLA--SP 657 IGQ D+QI++P + + QS L RWY+EGL+AFE TCP G ++ ++L + + Sbjct: 553 IGQKRDVQIYMPCAKDSPQSRLARWYNEGLNAFEQTCPMGMALFSQFADELEKVRSNSTA 612 Query: 658 DQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIA 717 F L+K + E LK +LE+GRDRLLE++S+GGE+AQALA+ I ++D+ L+ Sbjct: 613 LSENEFSGLLKQTKTAREKLKIELEKGRDRLLELNSHGGEQAQALADQIADEDNSPELVN 672 Query: 718 FAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFI 777 FA+ LFDIIG+ Q+D G N IV++P+ MLVPDFPGL E+G+T+TFDRE+ALARE+ +F+ Sbjct: 673 FALKLFDIIGVEQEDLGANSIVISPTGTMLVPDFPGLKEEGVTVTFDRELALAREEMEFL 732 Query: 778 TWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLP 837 TW+HP+IR G+DL+ SGD G + ++LL NK LP GTLL+ELIYVVE+Q+PK LQLNRFLP Sbjct: 733 TWDHPMIRQGIDLVASGDIGKAAMALLVNKQLPAGTLLIELIYVVESQSPKGLQLNRFLP 792 Query: 838 PTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEK 897 PTP+R+LLD GNN+ QV FET + +L + ++ +++V + ++ +++ G+ ++ Sbjct: 793 PTPIRLLLDNKGNNMGEQVAFETLHSKLKPLGKNIANQMVKMARSNIESLITRGDQLVKS 852 Query: 898 SARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRL 957 A +I A+N+AD++LSAE++RL+ALRAVN NIR E+ +E R Q ++ L +A WRL Sbjct: 853 LAEPIIAEAKNQADQQLSAEINRLQALRAVNKNIRQSEIDILEQQRTQSLDELSKANWRL 912 Query: 958 DALRLIVVTHQ 968 D LR+IV + Sbjct: 913 DCLRVIVTNKE 923 >UniRef50_B7V6T4 RNA polymerase-associated protein rapA n=24 Tax=Gammaproteobacteria RepID=RAPA_PSEA8 Length = 950 Score = 823 bits (2126), Expect = 0.0, Method: Composition-based stats. Identities = 498/964 (51%), Positives = 647/964 (67%), Gaps = 19/964 (1%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 + GQRWISD+E+ELGLGT++A D R +T+L+P+TG+ R YA ++P+TRV F PGD + Sbjct: 5 QYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFAPGDEV 64 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 T +GW+M V EV+E GLL Y G + L E L + + F DRLFAGQID Sbjct: 65 THFEGWKMTVREVEESEGLLVYHGLTA--QNEQCTLPETQLSNFIQFRLASDRLFAGQID 122 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 + F+LRY + S+ + GL G R I HQL+IA +V R APRVLLADEVGL Sbjct: 123 PLPWFSLRYHTLERRSQLLQSSLWGLGGARAQPIAHQLHIAREVADRMAPRVLLADEVGL 182 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEAG+I+H+QLLSG A RVLI+VPE LQHQWLVEM RRFNL+ ALFD ER+AE+ D Sbjct: 183 GKTIEAGLIIHRQLLSGRAGRVLILVPENLQHQWLVEMRRRFNLQVALFDKERFAES--D 240 Query: 242 AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 A NPF+ QL + +L++ + ++ + L A WDLLVVDEAHHLVW +D S EY +EQ Sbjct: 241 ASNPFEDTQLALVALEWLKEDERAQDALFAAGWDLLVVDEAHHLVWHQDQVSAEYALVEQ 300 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLA 361 LAE +PGVLLLTATPEQLG +SHFARLRLLDPNRFHD F E + YRPVA+AV LL Sbjct: 301 LAEIIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLEAFRRESEQYRPVAEAVQELLD 360 Query: 362 GNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT 421 LS + +G + E L D E AR LV L+DRHGT RVLFRNT Sbjct: 361 HGSLSAGARKAIHGFLGSEGDELLASVEGGDEE----ARSRLVRELLDRHGTGRVLFRNT 416 Query: 422 RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDN 481 R V+GFP+RELH LP+P+QY+ + E + E DN Sbjct: 417 RAAVQGFPQRELHAYPLPMPSQYEE----------LPAGEHPDLYPEVNFQQQWEDGDDN 466 Query: 482 ATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSII 541 WW FDPRVEWL+ L + KVLVICA A TAL LE LR R GI A VFHEGMSI+ Sbjct: 467 NRWWRFDPRVEWLIDTLKMLKQFKVLVICAHAETALDLEDALRLRSGISATVFHEGMSIL 526 Query: 542 ERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 ERDRAAA+FA+E+ GAQVL+CSEIGSEGRNFQFA H+V+FDLP +PDLLEQRIGRLDRIG Sbjct: 527 ERDRAAAYFADEEFGAQVLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIG 586 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 Q H IQ+HVP+LE +AQ L +WYH+ L+AF +TCPTG + L+ L + + Sbjct: 587 QRHTIQLHVPHLENSAQQRLFQWYHQALNAFLNTCPTGNALQHEFGPRLLPLLDGG-EDK 645 Query: 662 GFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 +D L+ R + EAL+A+L GRDRLLE++S G + +AL E+IEEQDDD L + Sbjct: 646 AWDALLAEGRARREALEAELHSGRDRLLELNSGGAGEGEALVEAIEEQDDDFALPIYMER 705 Query: 722 LFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEH 781 LFD GI+ +D +N ++L PS+ ML FP ++G+TIT+DR ALARED QF+TWEH Sbjct: 706 LFDAYGIHSEDHSENALILKPSEKMLDAGFPLGDDEGVTITYDRAQALAREDMQFLTWEH 765 Query: 782 PLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPV 841 P+++ G+DL+LSG G+++++L+KNKAL GT+L+EL++V EA AP+ LQL R+LPP + Sbjct: 766 PMVQGGMDLVLSGSMGNTSVALIKNKALKPGTVLLELLFVSEAVAPRALQLGRWLPPQAL 825 Query: 842 RMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARA 901 R LLD NGN+LA +V ET N QL +V R + +K V A + + + E +I Sbjct: 826 RCLLDANGNDLAGRVSLETLNDQLESVPRVSANKFVQAQRDVLAKQFDVAEGKIVPRHEE 885 Query: 902 LIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALR 961 + A+ + + EL+RL AL+AVNP++RD EL ++ + R++ + LD+A RL+A+R Sbjct: 886 RVARAKQQFAAAMDEELARLTALKAVNPSVRDSELDSLRTQREEGLALLDKASLRLEAIR 945 Query: 962 LIVV 965 ++V Sbjct: 946 ILVA 949 >UniRef50_C6MG44 SNF2-related protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MG44_9PROT Length = 966 Score = 814 bits (2102), Expect = 0.0, Method: Composition-based stats. Identities = 446/971 (45%), Positives = 621/971 (63%), Gaps = 15/971 (1%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRWI D + +LGLGTV V+ R VTL+F +TGE R YAR +P+TRV+F GDT+ Sbjct: 4 FKPGQRWICDVDLQLGLGTVQTVEHRIVTLIFKATGEIRSYARQSAPLTRVVFKSGDTVG 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 S+D ++V EV E NGL+ Y ++ S + L E L L+ ++P +RLF GQ D+ Sbjct: 64 SYDNAVLKVTEVHERNGLVVYS--CVNESGSSIELAEAQLAHHLLLNRPAERLFTGQFDQ 121 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 F +RY+ + + P GL G RTSLIPHQL IAH+VGRR+APRVLLADEVGLG Sbjct: 122 DKWFRIRYQTLLIRNRLAQAPLYGLVGTRTSLIPHQLYIAHEVGRRYAPRVLLADEVGLG 181 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA--EAQH 240 KTIEAG+ILHQQLL+ A+RVLI+VPETL HQWLVEMLRRFNL+F++FD+ R E Sbjct: 182 KTIEAGLILHQQLLTERAKRVLIVVPETLIHQWLVEMLRRFNLQFSIFDEARCLALEESE 241 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 + NPF +EQL++CSL+F R+ +R + + WDLLVVDEAHHL WS+ A S Y IE Sbjct: 242 EGENPFHSEQLILCSLNFLRQYPKRFQTALQGNWDLLVVDEAHHLHWSQQAVSPGYAMIE 301 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 QLA GVLLLTATPEQLG SH+ARLRLLDP+RF+ F+ F+ E+++Y P+A AV LL Sbjct: 302 QLAACTKGVLLLTATPEQLGKASHYARLRLLDPHRFNSFSAFIAEEQSYEPIAQAVEALL 361 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLL---QAANSDSEDAQSARQELVSMLMDRHGTSRVL 417 G L+ + ++ + + + LL Q +D R +L +L+DRHGT R+L Sbjct: 362 EGQALNAEIRQLIADTLNAAQAQVLLACLQDPAADQSQILKTRNKLAELLLDRHGTGRIL 421 Query: 418 FRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ-E 476 FRNTR +KGFP+R+L + L LP +YQ ++ +A + R +L PE +YQ Sbjct: 422 FRNTRAAIKGFPERKLVAVPLALPVEYQQ-----CLITFETTALSQPRLLLCPELLYQAR 476 Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 E + W DPR+ WL L + +KVLVI A T + Q L+ + G VFHE Sbjct: 477 AEPEQPYWTEIDPRISWLSTTLRQLKPEKVLVIAANTQTTRDIAQALKMQTGQHIPVFHE 536 Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 MS+IERDRAAA+FA+++TG+Q+L+CSEIGSEGRNFQF+ H+V+FDLP NPDLLEQRIGR Sbjct: 537 SMSLIERDRAAAFFADKETGSQILICSEIGSEGRNFQFSHHLVLFDLPLNPDLLEQRIGR 596 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS 656 LDRIGQ IQIHVPYLE +A +V+ WYHEGL+AFE TCP G+T++ V LI L Sbjct: 597 LDRIGQTETIQIHVPYLENSALAVMFHWYHEGLNAFEKTCPAGQTVFVKVEEQLIAALHQ 656 Query: 657 PD-QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 Q + L+ + H L L+ GRD+LLE +S A+ L ++ QD+D L Sbjct: 657 RQTQDKALAGLVGVTQTTHRELNEALDCGRDKLLEYNSFRPGVAEQLMQAARTQDNDPAL 716 Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQ 775 + + +FD G++ ++ + PS+HM +P FPGL ++G IT+ R+VALA ED Sbjct: 717 LQYMETVFDCCGVHIEEHRAGSYLTEPSEHMSMP-FPGLQDEGSVITYMRDVALANEDMH 775 Query: 776 FITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRF 835 F+TWEHP++ + ++ ILS ++G++ + LK++ + GTLL+E ++V+EA Q NR+ Sbjct: 776 FLTWEHPMVTHAIERILSNESGNAVVVALKHQQVQPGTLLLETLFVLEASGQHVQQSNRY 835 Query: 836 LPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQI 895 LPP +R++LD+ G+ ++ + N+ + V +++ + + +L++ E Sbjct: 836 LPPAVIRIVLDEQGSGDYPHLDHDAINQHVQPVAPGIAKQVMQLKEGAIRELLRVSEQHA 895 Query: 896 EKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGW 955 A LI AA + E+ RL+AL+ VNPN+RD+E+ E QQ+ +L + Sbjct: 896 GAQAPQLIAAAEARIRQTFIPEIERLKALQQVNPNVRDEEVQFFEQQLQQLTGALKSSNL 955 Query: 956 RLDALRLIVVT 966 LDA+R+IV T Sbjct: 956 GLDAVRVIVAT 966 >UniRef50_Q5ZT66 ATP-dependent RNA helicase n=9 Tax=Gammaproteobacteria RepID=Q5ZT66_LEGPH Length = 958 Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats. Identities = 415/985 (42%), Positives = 618/985 (62%), Gaps = 47/985 (4%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F +GQRWIS+TES+LGLG + VD R V++ FP+ GE+R+YA ++P++R+++ G+ Sbjct: 1 MTFRIGQRWISNTESQLGLGIITEVDGRQVSISFPAAGEDRIYAIDNAPLSRIVYKTGEE 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I ++D +++V ++E++G+L Y G D + + E+ L+ + + PQ RLF+G + Sbjct: 61 ILTNDQQRIKVTSIQEQDGVLLYTGN--DDLGNVAQVSELALNCFIKLNSPQQRLFSGLL 118 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D+++ F LR + ++ + GL G RT+ + HQ+ IA++V +R APRV+LADEVG Sbjct: 119 DKLNAFKLRIKTLEHLGRLQQSKARGLLGSRTNHLIHQIYIAYEVAQRFAPRVMLADEVG 178 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF---------- 230 LGKTIEAGMILH QL +G A RVLIIVP +L HQW VEMLRRFNL F++ Sbjct: 179 LGKTIEAGMILHYQLHTGRASRVLIIVPNSLIHQWFVEMLRRFNLHFSIIGPNQYDAMPS 238 Query: 231 ------DDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHH 284 D++ E + N F+ EQLV+ SLDF ++ + A+WDLLVVDEAHH Sbjct: 239 TLDELEDNDNPIEPASEDGNLFEGEQLVLTSLDFLMENETARQQALAAQWDLLVVDEAHH 298 Query: 285 LVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVE 344 L WSED+ S EY IE+L+ G+LLLTATPEQ+GM+SHFARLRLLDP RF+DF+ FV Sbjct: 299 LYWSEDSQSPEYTFIEKLSARSTGLLLLTATPEQVGMKSHFARLRLLDPARFYDFSAFVN 358 Query: 345 EQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELV 404 E+K Y + V L+ + + ++ L + + L ++A + + Sbjct: 359 EEKQYHEINKIVQDLMDYKE--KNGVDELNPQLHSHLKQLL-------GKEAPAGINATI 409 Query: 405 SMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRA 464 L+DR GT RVLFRNTR +KGFP+R +H + L P Y I+ S ++ Sbjct: 410 KELLDRFGTGRVLFRNTRAAIKGFPERRIHPVALTCPALYSEIIRESNLI---------- 459 Query: 465 RDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLR 524 +Y E +N +W DPRV+WL+ + R +K+LVICAKA TA+ LEQ L+ Sbjct: 460 -------HLYPETLLNNDSWIEHDPRVQWLVNKINELRPEKILVICAKAKTAISLEQYLK 512 Query: 525 EREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLP 584 R GIR+ +FHEG++IIERDRAAA+FAE++ GAQVL+CSEIGSEGRNFQF+ H+V+FDLP Sbjct: 513 LRTGIRSTLFHEGLTIIERDRAAAYFAEQENGAQVLVCSEIGSEGRNFQFSHHLVLFDLP 572 Query: 585 FNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYD 644 NPDLLEQRIGRLDRIGQ H I+IHVPYL TAQ L RWYHEG++ + +C G +I++ Sbjct: 573 LNPDLLEQRIGRLDRIGQNHPIEIHVPYLAGTAQEKLFRWYHEGINILQQSCSVGFSIFE 632 Query: 645 SVYNDLINYLASPDQT---EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQA 701 N L L+SP Q + + LI + + + +K L GRDRLLE++S + Sbjct: 633 VFENRLTPVLSSPLQDISEQSLEKLIADTQLHTQHIKEALNAGRDRLLELNSCNYTIGKE 692 Query: 702 LAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITI 761 L E+IE +++ L + ++ GI+Q+ +N +L P +HM FPGL EDG+T+ Sbjct: 693 LIEAIEAEENCLELENYMSQVYQEYGIDQEYHSENAEILRPGNHMKTAHFPGLKEDGMTV 752 Query: 762 TFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYV 821 T+ R AL RED +F++WEHP++ + +++IL + G++T++ + K++ GTL +E Y Sbjct: 753 TYSRSKALVREDMEFLSWEHPMVYDTMEMILESELGNATVTTISIKSIKPGTLFLETFYT 812 Query: 822 VEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQ 881 + + APK LQL+RF+P P+R+L+D G NL+ + +E N + RH G ++ V+ Sbjct: 813 INSSAPKYLQLDRFIPSLPIRILMDTTGKNLSGILSYEQLNNLCQPLKRHLGYPVIKQVR 872 Query: 882 QDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIES 941 +++ +ILQ E + I+ A++ + S E++RLE+L+ +NP IRD+E+ + Sbjct: 873 EEIESILQQTNKIAEDQMKLFIEEAKSTMELTTSQEVNRLESLQKINPAIRDEEIEFFKK 932 Query: 942 NRQQVMESLDQAGWRLDALRLIVVT 966 + ++ + +L A+R+++ Sbjct: 933 KISESNYFINSSTLKLQAIRVVINV 957 >UniRef50_B4RZE3 RNA polymerase-associated protein HepA n=3 Tax=Alteromonadales RepID=B4RZE3_ALTMD Length = 947 Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats. Identities = 450/971 (46%), Positives = 622/971 (64%), Gaps = 36/971 (3%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 F++GQRW+S+TE+ELGLG ++ D R+V +L+P+TGE R Y + D+P+TR++F G+T+ Sbjct: 6 QFSVGQRWLSNTETELGLGVIMGTDFRSVEVLYPATGEARKYTKQDAPLTRLIFEIGETV 65 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 S DGW+M + E +E G+ Y G R DT ++ V L E LDS + ++P+ RLF+ Q+D Sbjct: 66 KSQDGWEMTITEKEESQGVCIYHGLREDT-KAQVRLPETMLDSHIQLNQPERRLFSQQLD 124 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 F LR RA Y + R GL G R SLIPHQL+IA +VG RHAPRVLLADEVGL Sbjct: 125 NPKWFDLRERALDYQYDYLRSSTIGLAGARISLIPHQLHIASEVGGRHAPRVLLADEVGL 184 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEA +I+HQQL +G AERVLI+VP++L HQWLVEMLRR NL FA++D+ R + Sbjct: 185 GKTIEAALIIHQQLKTGRAERVLILVPDSLVHQWLVEMLRRVNLPFAIYDESRCDAIEES 244 Query: 242 A------YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 NPF+ +QLV+CS+DF +S++R + + A WDL+VVDEAHHL WS +A S E Sbjct: 245 EASDAGEVNPFENDQLVLCSIDFLSQSEKRQKQVQAASWDLMVVDEAHHLAWSSEAQSAE 304 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 Y+ +E LA PGVLLLTATP+QLG ESHFARLRLLDP RFH + F+EE+ Y +ADA Sbjct: 305 YKCVEALANLTPGVLLLTATPDQLGHESHFARLRLLDPARFHSYNAFLEEESKYSQLADA 364 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR 415 VA LL+ + ++ + L E + D + R L+ L+D HGT R Sbjct: 365 VAPLLSDAEPNDKQRTKLAEFAPDVM------EHTGDLSTPE-NRHALLHQLIDCHGTGR 417 Query: 416 VLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ 475 +LFRN R ++GFP+R+L +L LP Y A+ + + LYPER+ Sbjct: 418 MLFRNRRANIEGFPERKLSAYELALPEVYADAVSGGDLTYS-----------LYPERMAN 466 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFH 535 +W DPRVEWL+ ++ S + +K+L+ICA A TA +L +V+R + GIR +VFH Sbjct: 467 VVN----SWTKHDPRVEWLLDFMQSVKPEKILLICASARTAQELGEVIRTQSGIRHSVFH 522 Query: 536 EGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIG 595 EGMSI+ERD+AA +FA+E+ GAQ+LLCSEIGSEGRNFQFA H+V+FDLP PDLLEQRIG Sbjct: 523 EGMSIVERDKAAHYFADEEEGAQILLCSEIGSEGRNFQFAHHLVLFDLPITPDLLEQRIG 582 Query: 596 RLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLA 655 RLDRIGQ +QIHVPYL KTAQ VL+ WYHEGL+AFE TCPTG ++D V L+ Sbjct: 583 RLDRIGQTQTVQIHVPYLAKTAQHVLLDWYHEGLNAFEKTCPTGSGVFDDVKPLLVGACL 642 Query: 656 SPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 PD D+LI + L AQLE GRDRLLE++++G + + L E I D + +L Sbjct: 643 HPDDISARDELINMSVTLNSQLVAQLEAGRDRLLELNASGEGRVEQLLEDIVTLDSEQDL 702 Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQ 775 F +FD IG+ Q+++G++ +L P++ M V PGL +G+T+T+ R VA E+ Q Sbjct: 703 SRFMGRVFDAIGVQQEEKGNDCFILMPTESM-VSQLPGLDPEGMTVTYKRRVATTLENVQ 761 Query: 776 FITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRF 835 F++W+HPL+ +D+IL+ G S++ + +LP G +E ++V+ AQAPK LQL RF Sbjct: 762 FLSWDHPLVHTAIDVILTDVHGKSSMGFIAEPSLPKGAYWIEALFVLHAQAPKALQLGRF 821 Query: 836 LPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQI 895 LP TPVR+ LD GN A+ + F+ + R ++L+ A+QQ + ++ Sbjct: 822 LPQTPVRVCLDAQGN--ASDLSFDVKR----KIGRKISAQLLKALQQPLELAIEKARKLA 875 Query: 896 EKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGW 955 + A A N L E+ RL L+ NP +RD E+ IE+ + + + +A Sbjct: 876 HQQANQKQHDALNTMHLTLGEEIQRLRDLQKRNPAVRDSEIEFIETQMNALDKVIQEADV 935 Query: 956 RLDALRLIVVT 966 +LDALR++V Sbjct: 936 QLDALRIVVNN 946 >UniRef50_B7RWY5 Type III restriction enzyme, res subunit family n=3 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RWY5_9GAMM Length = 920 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 438/966 (45%), Positives = 602/966 (62%), Gaps = 46/966 (4%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M + +GQRW+S +++LGLG VV V+ R +TL FP+ GE R YA ++P+TR+ F GD Sbjct: 1 MEYLVGQRWVSHADAQLGLGIVVDVEPRRITLSFPAVGEERTYASENAPLTRLRFKEGDH 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I++ +G ++ V + E +GLL Y G D + + + E+ LD+ + + PQ RL G Sbjct: 61 ISTVEGVELTVSAINEHHGLLMYTG--TDHHDQQLVVSELELDAFVQLTTPQQRLLNGHF 118 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D+ FALR ++++ GL G RTSL+ HQL IA++VG+RHAPRVLLADEVG Sbjct: 119 DKNQDFALRVATLQHTNRLQGSAARGLMGSRTSLLHHQLYIANEVGQRHAPRVLLADEVG 178 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMI+HQQLL+G A R LI+VP +L HQWLVEMLRRFNL F+LFD +R AE Sbjct: 179 LGKTIEAGMIIHQQLLTGRATRALILVPPSLLHQWLVEMLRRFNLHFSLFDADRLAEMSE 238 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 NPF+ EQLV+CSLD + + A WDL+VVDEAHHL WSED +Y +E Sbjct: 239 G--NPFEAEQLVLCSLDMFEGRDELQQMALAAGWDLVVVDEAHHLHWSEDEAGEDYGFVE 296 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 L+ G+LLLTATPEQ+G SHFARLRLLDP+RFHD F EE+ +R +++ L Sbjct: 297 ALSTCSAGLLLLTATPEQIGQASHFARLRLLDPSRFHDLESFREEETQFRALSEMTDALD 356 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN 420 G SN D + +Q Q L+ L+DRHGT RVLFRN Sbjct: 357 RGEMPSN---------------------LPEDLDASQPPAQ-LIEQLLDRHGTGRVLFRN 394 Query: 421 TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD 480 TR V+GFP+R LH LP P QY+ A+ + ER++ E Sbjct: 395 TRAAVEGFPQRHLHRYPLPQPEQYEHAV------------------VELEERLHPELPYF 436 Query: 481 NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI 540 + +W +FDPRV+WL L + R +KVL+ICA A+TA+ LE L R GIR+A F+E +SI Sbjct: 437 DDSWLDFDPRVDWLETTLKALRPEKVLIICAHASTAVALEHHLHMRAGIRSAAFYEALSI 496 Query: 541 IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI 600 IERDRAAA+FA+E GAQ L+CSEIGSEGRNFQFA H+++FDLP NPDLLEQRIGRLDRI Sbjct: 497 IERDRAAAYFADETGGAQTLVCSEIGSEGRNFQFAHHLILFDLPLNPDLLEQRIGRLDRI 556 Query: 601 GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT 660 GQ HD++IHVPYL+ +AQ L+ WY GLD F +C G I+ + L+ L +T Sbjct: 557 GQDHDVEIHVPYLQGSAQETLLDWYDRGLDLFRDSCSAGYMIFQNFQQRLLPQLEQ--RT 614 Query: 661 EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 FD+L+ + E + +L +GRDRLLE +S E A+ L E IE + L + Sbjct: 615 AAFDELLTDSAEFTLRTRDELREGRDRLLERNSCKREVAETLIEEIESLESGDTLENYLE 674 Query: 721 NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE 780 L + G++Q+ ++ ++L PS+HML FP + E+G T+TF RE L+RED +F+TWE Sbjct: 675 ALCEAFGVDQEFHSEHTLILRPSEHMLTGHFPYVGEEGTTVTFSREKGLSREDMEFVTWE 734 Query: 781 HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP 840 HP+I+ ++++ S + G++ I LK K +P GT+L+E ++ + APK LQ+ RFLP +P Sbjct: 735 HPMIQEAMEMVYSTELGNAAIGTLKLKGVPAGTMLLEAVFTINCVAPKALQVERFLPLSP 794 Query: 841 VRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR 900 +R+L+D G LA V E N + V + T ++ V ++V A + L AQ E + Sbjct: 795 IRLLVDARGKQLAELVPHERLNALVEKVKKATALAIIKQVHKEVDAKMSLANAQAEAKLK 854 Query: 901 ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL 960 A++ A + L AEL+RLEALR +NP IR++EL + ++ + A +L AL Sbjct: 855 AVLTEAEDRMRNDLGAELARLEALRQLNPAIREEELEHLRYRIEECAIHIQHASLQLQAL 914 Query: 961 RLIVVT 966 RL++ T Sbjct: 915 RLVITT 920 >UniRef50_C0N229 Type III restriction enzyme, res subunit family n=2 Tax=Gammaproteobacteria RepID=C0N229_9GAMM Length = 948 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 404/966 (41%), Positives = 579/966 (59%), Gaps = 26/966 (2%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 F +GQRW+S++E+ELGLG + + R + + FP+T E R YA +++P++RV+++ G+ + Sbjct: 5 EFVVGQRWVSNSEAELGLGIIKQLSGRQIEVFFPATEETRFYAANNAPLSRVIYSVGEQV 64 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 + + + V+E NG Y G D +++ E+ LDS++ F+KPQDRLFAGQ+D Sbjct: 65 KTREQQSFTISTVQEFNGNYIYQGDSSDG--DAISIHEMDLDSRVHFNKPQDRLFAGQVD 122 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 + +F LR + + GL G R +PHQL IA +V +R APRVLLADEVGL Sbjct: 123 KNSKFELRAKTLAHQHSLLSSSVYGLLGGRVQFLPHQLYIARNVTQRFAPRVLLADEVGL 182 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEA-QH 240 GKTIEAG+ILH+Q+L+G R LI+VP+ L HQWLVEMLRRFNLRF L D +R+ + Sbjct: 183 GKTIEAGLILHRQVLTGQVRRALIVVPDALLHQWLVEMLRRFNLRFTLIDKDRHEALTEQ 242 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 D NPFD+ QLV+C L + A+WD+++VDEAHHL W E S EY IE Sbjct: 243 DEGNPFDSAQLVLCGLSELIAHPDMQADVTAADWDMMIVDEAHHLYWQEGNVSDEYALIE 302 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 LA +P +LLLTATPEQLG++SHFARLRLLDP+RFHD A F ++++ Y+PV++ + +L Sbjct: 303 TLAAQIPSLLLLTATPEQLGIDSHFARLRLLDPDRFHDLAAFKQQEEAYQPVSELIDLLD 362 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN 420 A L + + + E LL + +++ + L+DRHGT RVLFRN Sbjct: 363 ADTALEQVQKPATQKQLAEYLDADLLAQLLVEDTFLDASQIA-IRQLLDRHGTGRVLFRN 421 Query: 421 TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD 480 TR+ V GFP+R LH L LP QT+ E + Sbjct: 422 TRDVVAGFPERVLHPYPLTLPEALQTSD----------------------EPVLLPENLL 459 Query: 481 NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI 540 W D RV+WL+ +L +HR KVL+ICA+A TA+ LE +LR G+R+AVFHE MS+ Sbjct: 460 GDAWLQTDERVQWLVDFLKAHRQDKVLIICAQADTAMDLETLLRLHHGVRSAVFHEDMSL 519 Query: 541 IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI 600 + RDRAAA+FAEE+ GAQ L+CSEIGSEGRNFQF +V+FDLP NPDLLEQRIGRLDRI Sbjct: 520 VNRDRAAAFFAEEEEGAQCLVCSEIGSEGRNFQFCHQLVLFDLPNNPDLLEQRIGRLDRI 579 Query: 601 GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT 660 GQ H + IHVP+ EK+AQ VL WYH+G++AFE G+ + L L + Sbjct: 580 GQHHAVNIHVPFYEKSAQQVLFNWYHQGMNAFERVFAAGQVVSAQTDVLLQRCLQDSNDK 639 Query: 661 EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 + +LI++ +E A ++ GR+RLLE +S + A + +E+ L + Sbjct: 640 KAQSELIESTQEIVATTLAAMQSGRNRLLERNSFDKQDAGLIVAELEDATRALELADYMD 699 Query: 721 NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE 780 ++FD G++Q + I++ P HML FP L EDG+T T+ R AL+RED F++WE Sbjct: 700 DVFDAFGVDQQTHSADSIIVEPGSHMLFEQFPALPEDGLTATYQRHRALSREDMAFLSWE 759 Query: 781 HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP 840 HP++ +DL++S D G+S L+ A GTLL+E ++VV + +QLQ NRF+ + Sbjct: 760 HPMVTGAMDLVISSDLGNSAFCTLETSAFNAGTLLLEALFVVNCVSGRQLQTNRFITDSH 819 Query: 841 VRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR 900 +R+++D+ G V FN+ + R T +L+ + + +++ E + Sbjct: 820 LRLVIDERGRQHQESVPDREFNKLAGRIPRATAQELIRHARGQISGLIEHAEKAVVAPQE 879 Query: 901 ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL 960 + A + +L AE RL+AL VNP IR E+ + R Q+ +S+ A RLDA+ Sbjct: 880 RIRQQALDAMHAELEAEQQRLQALAEVNPTIRQQEIDFLAQRRAQLADSIQSAELRLDAV 939 Query: 961 RLIVVT 966 R+ +VT Sbjct: 940 RVAIVT 945 >UniRef50_A4A3Z1 RNA polymerase associated protein rapA n=1 Tax=Congregibacter litoralis KT71 RepID=A4A3Z1_9GAMM Length = 916 Score = 768 bits (1984), Expect = 0.0, Method: Composition-based stats. Identities = 419/965 (43%), Positives = 572/965 (59%), Gaps = 53/965 (5%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M + +GQRW+S +SELGLG VV +D R V++ FP+ E R YA ++P+TRV GD Sbjct: 4 MSYAIGQRWLSHADSELGLGIVVELDGRRVSVHFPAVEEERTYATDNAPLTRVKLREGDA 63 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 + + DG ++QV V EE LL Y E L E+ LD + + P+ RL A Q Sbjct: 64 LHTRDGRKLQVLAVHEEQELLIYEVA---GEGQRELLAELDLDDHIDLATPRQRLLASQY 120 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D FALR ++ + GL G RT+L+PHQL +A++VG+RHAPRVLLADEVG Sbjct: 121 DGHAAFALRMATAEHLHRLQQSGLRGLLGTRTALLPHQLYVANEVGKRHAPRVLLADEVG 180 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEAGMILH+QLLSG + RVLI+VP +LQ QWLVEM RRFNL+FALFDD+R E+ Sbjct: 181 LGKTIEAGMILHRQLLSGDSRRVLIMVPASLQFQWLVEMRRRFNLQFALFDDDRLMESG- 239 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 + NPF+ EQLV+CS D +AEWD+L+VDE H L W D+ S E++ +E Sbjct: 240 EGSNPFEDEQLVLCSTDLFL-DPTARALALDAEWDMLIVDEVHRLAWHRDSVSDEFRFLE 298 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 +A +PG+LLLTATPEQ+G+E+HFARL LLDP RFHDFA F EE+ Y+ + L Sbjct: 299 SMAAQIPGLLLLTATPEQVGLEAHFARLALLDPERFHDFAAFEEEESQYKRWSSLTDALD 358 Query: 361 AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN 420 G K ++ D ++A + V+ L+DR+GT RVLFRN Sbjct: 359 RGEKPQGLPADI----------------------DPEAAPERQVAALLDRYGTGRVLFRN 396 Query: 421 TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD 480 R V GFP RE+ L A D + +Y + D Sbjct: 397 ARASVGGFPTREMQPHPL------------------------PAVDSPVYQHLYPDLHVD 432 Query: 481 NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI 540 W DPRV WL+ L + R +KVLVICAKA TAL LE L+ R GIR+A FHE +S+ Sbjct: 433 TEQWLQEDPRVAWLVSQLKALRPEKVLVICAKADTALALESYLQLRAGIRSAAFHEQLSL 492 Query: 541 IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI 600 +ERDRAAA+FAE++ GAQ L+CSEIG EGRNFQFA H+++FDLP +PD LEQRIGRLDRI Sbjct: 493 VERDRAAAYFAEQEQGAQALICSEIGGEGRNFQFAQHLILFDLPEHPDQLEQRIGRLDRI 552 Query: 601 GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT 660 GQ I IHVPY+E +AQ L+RWYHEG+D F +C G I L L +Q Sbjct: 553 GQKERIFIHVPYIEGSAQETLMRWYHEGIDLFRSSCSAGDMILGEFKESLEEQLR--EQN 610 Query: 661 EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 F+ L+++ + E + +L +GRD+LLE S E+ QAL +I + +D L AF Sbjct: 611 GAFEALLRDTADFTERARKELSEGRDKLLERSSCNAEQGQALGTAISDIEDPDTLGAFLR 670 Query: 721 NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE 780 L D+ G+ +D GD+ VL + L+ FP + EDG T+T R+ ALARED F+ WE Sbjct: 671 ELCDVTGVEHEDLGDSSSVLRRGEQELLEIFPEVPEDGCTVTVSRDEALAREDWIFLGWE 730 Query: 781 HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP 840 HP + N + +L G +++ +K K +P G+ L EL++ V AP+ L L R+LP P Sbjct: 731 HPWMENAMTTVLGSALGQASVGAMKLKGVPGGSRLYELLFTVSLSAPRALGLQRYLPLAP 790 Query: 841 VRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR 900 R+LLD +G +L+ + E N ++ V R T SK+V +++++ + EAQ Sbjct: 791 QRILLDASGRDLSKLLTHERLNERVEKVPRGTVSKIVRQLREEIETRIDDAEAQFAGELE 850 Query: 901 ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL 960 A E++ E++RL ALRAVNP IR++E+ + ++ + +L A L + Sbjct: 851 TRQKEAAQRYGEQMDEEIARLSALRAVNPAIREEEIENLRLRKEAGLVALGTARSTLQGV 910 Query: 961 RLIVV 965 RL++ Sbjct: 911 RLVIT 915 >UniRef50_Q1R0C7 Helicase-like protein n=4 Tax=Gammaproteobacteria RepID=Q1R0C7_CHRSD Length = 980 Score = 760 bits (1964), Expect = 0.0, Method: Composition-based stats. Identities = 424/983 (43%), Positives = 585/983 (59%), Gaps = 27/983 (2%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 F GQRW+SD E+ELGLGT+++ D R+VT+LF ++ E R Y+ +P+TRV+F GD I Sbjct: 3 EFIPGQRWVSDGEAELGLGTILSCDFRSVTVLFAASQETRTYSVRQAPLTRVVFGAGDRI 62 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 + DG + V++ KE GLL Y+ D E E L + F + +DRL GQ+D Sbjct: 63 EAADGRTLTVDDTKEAKGLLIYVVETADGEYEEF--PESRLADSMRFQQARDRLLTGQVD 120 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 R D F LRYR + + P +GL G R LIPHQL IA +V RRHAPRVLLADEVGL Sbjct: 121 RNDWFELRYRTLHHYHRIAQHPANGLAGPRVDLIPHQLYIADEVSRRHAPRVLLADEVGL 180 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEAG+ILH+ L++G AER LI+VP++L HQWLVEMLRRF+L F L D+++ H Sbjct: 181 GKTIEAGLILHRLLITGRAERALILVPDSLTHQWLVEMLRRFSLHFTLLDEQQSQ---HS 237 Query: 242 AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 NPF++ QLV+ S + + R +WDLL+VDEAHHL WS +A Y +EQ Sbjct: 238 TGNPFESAQLVLASQQWLFANPHRQTQAQACDWDLLIVDEAHHLDWSPEASGPGYACVEQ 297 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML-- 359 LA + GVLLLTATPEQ+G+ SHFARLRLLDP R+ A F E+ Y VA+AV L Sbjct: 298 LAHAIDGVLLLTATPEQMGLASHFARLRLLDPERYTSLAAFEAEETGYARVAEAVDALER 357 Query: 360 LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 L G+ D + + + Q + L SD SAR++L L+DRHGT RV+FR Sbjct: 358 LPGDAADRDSVGAVIDDADSQALLDTLIDPESDDTQRDSARRQLREQLLDRHGTGRVMFR 417 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIY----- 474 N+R V GFP+R LH +L P+ Y+ ++ + +PE + Sbjct: 418 NSRRHVAGFPERHLHVTRLAPPSSYRRELRKLDRDMDYLDDLLITTGLDHPEVLLYPDAM 477 Query: 475 ---------QEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLRE 525 + + WW DPRV WL+ LT K+LVI TA L + LR Sbjct: 478 YRAQCDASPGDTALNAEPWWQIDPRVTWLLERLTEVGRDKMLVIAHDRETASDLSEALRV 537 Query: 526 REGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPF 585 G++A VFHEG+++IERDRAAA FA+E+ G QVL+CSEIGSEGRNFQF H+VMFDLP Sbjct: 538 LGGVQAPVFHEGLTLIERDRAAAAFADEEDGCQVLVCSEIGSEGRNFQFCRHLVMFDLPA 597 Query: 586 NPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDS 645 +PD LEQRIGRLDRIGQ H I+IHVP E + L+RWY EG+ AF+ G +YD+ Sbjct: 598 HPDQLEQRIGRLDRIGQQHAIEIHVPVFEDSPGERLLRWYDEGMRAFDAPHGIGSELYDA 657 Query: 646 VYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAES 705 + + + + ++I + R E+ A E GRDRLLE ++ +AQA+ E+ Sbjct: 658 FGDSVA---DALLDDDALAEVIADTRRFFESRLAAHEAGRDRLLEWNACRPARAQAITEA 714 Query: 706 IEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGL--SEDGITITF 763 I E DDD L + D+ G+ D G ++ L HML PGL E+G + TF Sbjct: 715 IRELDDDPALPRYVDKALDVFGVESRDLGGDIQHLLAGPHML-DGLPGLVKGEEGFSATF 773 Query: 764 DREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVE 823 DR+ ALAR+D Q ++WEHPL+R ++ IL G G++ ++LL++ A+P G L+ EL++ Sbjct: 774 DRQRALARDDVQRLSWEHPLVREMMERILDGTLGNTALALLQHPAIPGGRLMAELVFRTH 833 Query: 824 AQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQD 883 AP+ L + RFLPPT VR+LLD++G NL +V F + L V + L+ + Sbjct: 834 CPAPRHLNVGRFLPPTAVRLLLDESGANLTQKVSFGGLAKNLQKVKKAVARDLIKSRHAQ 893 Query: 884 VHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNR 943 + +L E + E ++I+AA+ + L EL+RL+AL NP +RD E+ A+ R Sbjct: 894 LRDLLTRAEDEAENELPSIIEAAQTHMRDTLDTELARLKALARHNPAVRDAEIEALAHER 953 Query: 944 QQVMESLDQAGWRLDALRLIVVT 966 +++ ++D RLDA+R++V Sbjct: 954 RELDTAIDATRLRLDAVRVVVTV 976 >UniRef50_C5SAQ5 Helicase domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SAQ5_CHRVI Length = 928 Score = 736 bits (1901), Expect = 0.0, Method: Composition-based stats. Identities = 440/964 (45%), Positives = 575/964 (59%), Gaps = 41/964 (4%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRW+S+T++ELGLG V AVD R V + +P+TGE RLYARS++P+ R++ G+ I Sbjct: 4 FVPGQRWLSETQTELGLGLVEAVDGRHVRIAYPATGETRLYARSEAPLARLVVERGERIR 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 G +++V E + E+GL+ Y G D E L E LD +L F++P RL A ++D Sbjct: 64 DRAGRELRVIEARVEHGLIIYRG--EDAEGQLRELPEPELDDRLSFNRPGQRLLAARLDS 121 Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLG 182 F LR+R + P GL G R +LIPHQL+IA +V RR APRVLLADEVGLG Sbjct: 122 DHWFRLRHRTWTQGMREAGSPTLGLVGARVALIPHQLHIAAEVSRREAPRVLLADEVGLG 181 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 KTIEAG+ILH+ L+G+A RVLI+ PE L HQWLVEM RRFNL ALFD ER+ + D Sbjct: 182 KTIEAGLILHRMRLTGSARRVLILTPEPLLHQWLVEMRRRFNLALALFDQERFESIRDD- 240 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 NPF +EQ V+C L+ + EAEWDLL+VDEAHHL WSE PS Y+ +E L Sbjct: 241 -NPFLSEQCVLCGLELLVAQAGAGRAVLEAEWDLLIVDEAHHLTWSETDPSPAYRLVEAL 299 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 A +P VLLLTATPEQLG HF RLRLLDP RFHD A F +E+ Y P+A A LL Sbjct: 300 ASRIPSVLLLTATPEQLGRAGHFGRLRLLDPARFHDPAAFQDEEARYAPIAALAARLLDD 359 Query: 363 NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR 422 L + + L ++GE D R+ L+ L+DRHGT RVLFRNTR Sbjct: 360 EPLDDADRARLESLLGECD---------------GLDRETLIERLIDRHGTGRVLFRNTR 404 Query: 423 NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNA 482 + GFP+REL LP P Y+T + + + Sbjct: 405 ATIPGFPRRELIAHPLPEPDAYRTVPDLDPLARLTPEC------------------AHGS 446 Query: 483 TWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 W + DPR++WL+ L R KVL+ICA+A T L+L + LR+R GI AAVFHEGM I+E Sbjct: 447 GWESVDPRLDWLIATLRDLRPAKVLLICAQAHTVLELREALRQRAGIHAAVFHEGMEIVE 506 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 RDRAAA+FA + G Q+LLCSEIGSEGRNFQFA H+++FDLP PDLLEQRIGRLDRIGQ Sbjct: 507 RDRAAAYFASVEDGTQILLCSEIGSEGRNFQFAHHLILFDLPLEPDLLEQRIGRLDRIGQ 566 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG 662 A I++HVPYL +L RWY EGL AFE CP +++ + L + LA P Q E Sbjct: 567 AQTIRLHVPYLSGGPMEILFRWYAEGLGAFEQLCPAAAAVHERLGGRLRDALADPAQAE- 625 Query: 663 FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNL 722 LI R L +L GRDRLLE+HS+ + AL ESI D + ++ + + Sbjct: 626 --ALIAETRMLASQLNGELAAGRDRLLELHSHRLTRDAALVESIAASDAERSVADYLSDF 683 Query: 723 FDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHP 782 +D G+ + +V+ P ML FP L EDG+T TFDR ALA ED F+TWEHP Sbjct: 684 WDAFGVEHEPGPGGSVVVRPGPQMLQETFPRLPEDGLTATFDRAQALANEDRAFLTWEHP 743 Query: 783 LIRNGLDLILSGDTGSSTISLLKNKA-LPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPV 841 + R ++L+ + + GS+ + L++ A P TLL+E++YV E AP +LQ+ FLPPT V Sbjct: 744 MTREAMELLTASELGSAALILIQGDARFPRATLLLEILYVAECPAPPELQVEHFLPPTLV 803 Query: 842 RMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARA 901 R+LLD G + A ++ E+ + N L+ + + L+ GE + + Sbjct: 804 RLLLDAEGRDRAGEIAHESLRGDCLSHNGTLARALIASQASRLAERLEQGEELAHGALKD 863 Query: 902 LIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALR 961 L AR + L EL RL AL AVNP +R DE+ + R+++ L QA RLDALR Sbjct: 864 LEQEARARMHQVLGDELERLLALAAVNPAVRPDEIARLRHRRERLDVLLGQAHLRLDALR 923 Query: 962 LIVV 965 LI+ Sbjct: 924 LIIA 927 >UniRef50_Q1Q8E0 Helicase-like n=22 Tax=Gammaproteobacteria RepID=Q1Q8E0_PSYCK Length = 1028 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 388/977 (39%), Positives = 562/977 (57%), Gaps = 38/977 (3%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 F +GQR++SDTESELGLG V+ VD R V +LFP + E R+YA++ +P++RV+F GD+I Sbjct: 78 EFAVGQRYLSDTESELGLGVVIDVDDRCVHILFPQSEETRVYAKNSAPLSRVVFKVGDSI 137 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 + G V V+E G+L Y E A+ E L + + +KP +RL AG+I+ Sbjct: 138 SDQAGKSYTVNAVEEVMGVLKYSV-----NEHEKAIMETRLAANITLAKPLERLLAGRIE 192 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 R D + LR + S P GL G R +I HQL IAH+VG+R APRVLLADEVGL Sbjct: 193 RSDWYDLRQDILRMQSALAGHPLKGLMGARVDIIEHQLYIAHEVGKRIAPRVLLADEVGL 252 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH- 240 GKTIEAG+I+HQQLL+G AERVLI+VP++LQ+QW++E+ RRFNL FALFD R A + Sbjct: 253 GKTIEAGLIIHQQLLTGKAERVLILVPDSLQYQWMIELRRRFNLNFALFDLVRTAAIKEH 312 Query: 241 -DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAP-SREYQA 298 N F TEQ VI +D + EA +DLLVVDEAHHL W E + +Y Sbjct: 313 DPEQNVFMTEQCVIAGMDLLLDHPDLYDQAMEAGFDLLVVDEAHHLHWDEAQGGNDKYDL 372 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAM 358 I AE GV+LLTATPEQLG +SHFARLRLLDP+RF D +F++ Q + A ++ Sbjct: 373 IADFAEETAGVMLLTATPEQLGAQSHFARLRLLDPDRFDDLDEFIDGQDAFAETAAVASL 432 Query: 359 LLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLF 418 L+ LS+ ++ L ++ L N D + A E L+DRHGT R+LF Sbjct: 433 LIEDKPLSDGQIAALSSLLT--ISIDELATINEDEKLRTYALNE----LLDRHGTGRILF 486 Query: 419 RNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 RNTR VKGF R LPLP + + + +G + E+++ E Sbjct: 487 RNTRESVKGFYGRSSQPYPLPLPEAWVDSYQTNGKL---------------REQLWGEEN 531 Query: 479 GDNATWWNFDPRVEWLMGYLT-SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEG 537 + W DPRV WL+ L + +KVL+I AT LE VLR GI+ A+F E Sbjct: 532 QPDGGWLEDDPRVPWLIDILKGELKHKKVLLIARSGATVESLEAVLRLHAGIKTAIFTEQ 591 Query: 538 MSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL 597 M+++ERD+AAA+FA+ + GAQ+LLCSEIGSEGRNFQFAS ++++DLP NPD LEQRIGRL Sbjct: 592 MTLLERDQAAAFFADGE-GAQILLCSEIGSEGRNFQFASQLILWDLPANPDTLEQRIGRL 650 Query: 598 DRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASP 657 DRIGQ I +HVPY++ TAQ L +WY+ L+ F PT +++ + +L L Sbjct: 651 DRIGQTQQIMLHVPYVQGTAQERLYQWYNNALNMFNQISPTAQSVQEQYIQELKPMLEGA 710 Query: 658 DQTEG---FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTN 714 D D+I + + L+ QL+ GRDRLLE +S A +A+++ + D Sbjct: 711 DNDVNRAILADIIAEAAQTRQGLETQLQAGRDRLLEYNSCRPRVAGRIADAMRDFDGHNL 770 Query: 715 LIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPD----FPGLSEDGITITFDREVALA 770 L F F I + + D V++P D + D P EDG+T+TF+RE AL Sbjct: 771 LPQFIERFFASANIEHNIQRDGSWVISPIDSTEISDYIDGLPLGDEDGMTLTFEREQALQ 830 Query: 771 REDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQL 830 RED FIT EHPL++ +L + G++T+++LK+ A+P G +++E+ + VEA APK L Sbjct: 831 REDIAFITHEHPLMQAIYELASTSTFGNTTVAMLKSAAVPQGMVMLEVNFRVEAIAPKLL 890 Query: 831 QLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQL 890 L L +R+ + + G++L+A++ + + ++++ +++ + Sbjct: 891 NLPATLSTQNIRVFISEQGSDLSARISADMIMPHIERLDKNRARQVIKVRGDVIEQRYYE 950 Query: 891 GEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESL 950 E + + + A ++ S E+ RL+ L+ +NPN+R E+ +E + Q ++L Sbjct: 951 AEDIARQQLTEIGEQASARFSQQWSREIKRLKHLQTINPNVRPAEIERLEQLKLQGEQAL 1010 Query: 951 DQAGWRLDALRLIVVTH 967 D++R++V Sbjct: 1011 AGLSLVPDSIRVLVAVK 1027 >UniRef50_UPI0000E0E48B ATP-dependent helicase HepA n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E48B Length = 944 Score = 735 bits (1897), Expect = 0.0, Method: Composition-based stats. Identities = 387/970 (39%), Positives = 550/970 (56%), Gaps = 33/970 (3%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M FT+GQRW+S + ELGLG V V R VT+ FP T E++ Y+ SP+ R++ GD Sbjct: 1 MNFTVGQRWLSSQQPELGLGIVADVQLRQVTIYFPVTQEDKHYSIDSSPLIRLLLEKGDI 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 D + V + + NGL+ Y+ ES V L E L ++P+DRLF Q+ Sbjct: 61 GLDVDKQEFCVLDTMDTNGLIQYLVEYTHNNES-VVLTETQLSHLTQINQPEDRLFTLQL 119 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D+ + F R A + P GL G R SLI HQ++IA+ VG R APRVLLADEVG Sbjct: 120 DKYNWFDARREAFDARFTHQQSPLLGLSGARVSLIEHQIHIANQVGNRFAPRVLLADEVG 179 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEA MI+ +Q LSG A R+LIIVPETL HQWLVEM RR N+ A+FD R Sbjct: 180 LGKTIEAAMIIQKQRLSGRATRILIIVPETLIHQWLVEMHRRVNVPCAVFDASRVEALLE 239 Query: 241 DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 D NPFD EQ+V+ S+D + + WDL+VVDEAHHL WS + S EY +E Sbjct: 240 DGMNPFDAEQIVLISIDTLVTEPKINAWALASSWDLMVVDEAHHLHWSNETVSDEYALVE 299 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL 360 L + PGVLLLTATP+QLG ESHFARLRLLDP RF DFA + EQ Y+ +A+ LL Sbjct: 300 GLTQITPGVLLLTATPDQLGHESHFARLRLLDPARFTDFATYEAEQAQYKVLAELTDALL 359 Query: 361 AGNKLSNDELN--MLGEMIGEQDIEPLLQAANSDSEDAQSA--RQELVSMLMDRHGTSRV 416 + I + + + + Q +++ L+DRHGT R+ Sbjct: 360 DEQSTMSLVAELAETEATISNELQTHVASIYTDIDVEYLATTSHQSMINHLIDRHGTGRM 419 Query: 417 LFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQE 476 FRNTR + G +R LH L LP ++QT E Sbjct: 420 FFRNTRQSIAGLNERILHAYPLALPEEWQTLDCPRSHT-----------------CFIHE 462 Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 +++W DPRV+WL+ YL + K L+IC T LQL + +++ G VFHE Sbjct: 463 LPALHSSWLYDDPRVDWLLEYL-EDTTNKTLLICRSQRTVLQLAEFIKKLTGQHLPVFHE 521 Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 MSIIERDRAA +F++ + A +LLCSEIGSEGRNFQFA H+++FDLP +PDLLEQRIGR Sbjct: 522 NMSIIERDRAAHYFSDPENSAPLLLCSEIGSEGRNFQFAQHLILFDLPAHPDLLEQRIGR 581 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS 656 LDRIGQ+ + IHVPY+E T Q+ L + YHEGL++F TC G ++ ++ + + + LA Sbjct: 582 LDRIGQSQTVNIHVPYVEHTGQATLFKLYHEGLNSFNQTCAIGAKVFATLDHKIQSALAE 641 Query: 657 PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLI 716 P + +D+I + +QGRD+LLEI ++G ++L +++ + ++ Sbjct: 642 PTE---INDVIIQAAALASQFNEERQQGRDKLLEISASGKGTIESLVDALNAPELAHSVE 698 Query: 717 AFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQF 776 +F + D +GI + +L P+D L P L ++G+TIT+ R+VA ARE+ F Sbjct: 699 SFMHLICDALGIAHIVNDAHSFILQPTDQ-LAHAIPSLPDEGLTITYRRDVATAREELSF 757 Query: 777 ITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFL 836 I+W+HPLI +D+I S G +++S + N ALP G VE +Y+++A N +L Sbjct: 758 ISWDHPLIHEAIDIITSEVNGKASLSFMSNTALPAGAFFVECLYILQANTDNTTGFNPYL 817 Query: 837 PPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIE 896 P TPV + LD GN++ + +L V+R KLV A+ + + +L EA + Sbjct: 818 PQTPVLIQLDSQGNSM------NNVSVELTKVDRKLSQKLVPALAKPIKLVLAKAEALAQ 871 Query: 897 KSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWR 956 + ++ +AA +L AE++RL L+ VNP+I D E+ ++S +Q + +A Sbjct: 872 ERVASVKEAAHEFIHTQLGAEITRLTELQKVNPSISDIEIAHMQSTLEQAQTRIQEATLY 931 Query: 957 LDALRLIVVT 966 LDA+R+++ Sbjct: 932 LDAIRVVINN 941 >UniRef50_B9XDU2 SNF2-related protein n=1 Tax=bacterium Ellin514 RepID=B9XDU2_9BACT Length = 943 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 398/962 (41%), Positives = 554/962 (57%), Gaps = 36/962 (3%) Query: 10 ISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQM 69 +S++E ELGL TVV V +LF +TGE R YA ++P+ RV F GDT+ ++D ++ Sbjct: 1 MSESEPELGLATVVHTGEGRVQVLFSATGETRTYASDNAPLKRVRFRIGDTVKTNDDKEL 60 Query: 70 QVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALR 129 V+EV E+ GLL Y+G A+ E L + L P+DRLFAG+ D F LR Sbjct: 61 TVKEVIEKEGLLLYVG-------QDQAVPEAELSASLSLRGPEDRLFAGRFDEPATFELR 113 Query: 130 YRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGM 189 + + P G G R LIPHQL IA +V R APRV+L+DEVGLGKTIEAG+ Sbjct: 114 RLTLELLHRLRKSPVRGFVGGRIDLIPHQLYIAQEVASRQAPRVMLSDEVGLGKTIEAGL 173 Query: 190 ILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA--EAQHDAYNPFD 247 ILH+ LLS A R+L++VPE+L HQW VEMLRRFN+ +FD+ER A EA NPF Sbjct: 174 ILHRLLLSERANRILVLVPESLVHQWFVEMLRRFNVWLNIFDEERCAAIEAGDPGANPFL 233 Query: 248 TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVP 307 +QLV+ S++F S R A WD+LVVDEAHHL WS++ PSREYQ +E+L+ Sbjct: 234 DDQLVLTSINFLASSPTRSAQAVAAGWDVLVVDEAHHLKWSKENPSREYQIVEELSRQSE 293 Query: 308 GVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSN 367 G+LLLTATPEQLGMESHFARL+LLDP+R HD A F+ E ++Y+P AD LL G K + Sbjct: 294 GLLLLTATPEQLGMESHFARLQLLDPDRHHDLASFLAESRDYKPTADIAEKLLTGKKPTR 353 Query: 368 DELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKG 427 ++ LG + L + + A Q L+ L+D HG RVLFRNTR G+ G Sbjct: 354 KDITFLGNLFAHN--AELKEHLEKVGKGNAEASQALLKDLLDMHGPGRVLFRNTRAGMTG 411 Query: 428 FPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNF 487 FPKR H KL K+ E R E + Sbjct: 412 FPKRSAHLAKLD---------------PGPKAEEWLDRVSTEFAVDAGEANLKASLDLTK 456 Query: 488 DPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAA 547 DPR+ WL+ L QKVL+IC ++ LR I+ +FHEG+++++RDR A Sbjct: 457 DPRILWLVDLLQKLDPQKVLLICRTIEKVEAIDAALRRHVSIKTGIFHEGLTLVQRDRNA 516 Query: 548 AWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 AWFAE D GA++LLCSEIGSEGRNFQFA H+V+FDLP NP+LLEQRIGRLDRIGQ DI Sbjct: 517 AWFAEAD-GARLLLCSEIGSEGRNFQFAHHLVLFDLPLNPELLEQRIGRLDRIGQTKDIH 575 Query: 608 IHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS------PDQTE 661 IHVPYL + Q VL RWYHEGLDAFE G + + + + + Sbjct: 576 IHVPYLAHSPQEVLARWYHEGLDAFEKNLEGGNELLLRFGRAVHDLALEFSVADRSEADQ 635 Query: 662 GFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 DL++ + L+ LEQGRDRLLE++S A+ + E I+++D T+L + ++ Sbjct: 636 ELADLLERTADGRRELRQVLEQGRDRLLEMNSFRAPVARQIIELIQKEDRQTDLEDYLLS 695 Query: 722 LFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEH 781 +FD G++ ++ + L P ++ FP + +G+ T DR AL RED F+TW+H Sbjct: 696 MFDHFGVHIEELAPHTWQLNP-QGIITDSFPAMPAEGLIATCDRRRALGREDIGFLTWDH 754 Query: 782 PLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPV 841 P++ ++L+L + G+ + ++L TLL+EL +++EA A +L ++RFLP TP+ Sbjct: 755 PMVTGAMELLLGSEAGNCSFAVLPTAG--ERTLLLELAFILEAIAAPRLHMDRFLPATPI 812 Query: 842 RMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARA 901 R++++ N++ + +L + + + + A+L E A Sbjct: 813 RLVINHKLENVSESHPGKVLEERLRKGSPYKLLDNEQLARGTLPAMLHHASTLAETGAET 872 Query: 902 LIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALR 961 L AA E ++ L E+ RL+ LR VN +IR E+ E ++Q+ ++ QA RLD+LR Sbjct: 873 LRQAALKEMNQLLGHEVQRLKTLRQVNDHIRPQEIIMAEEQQKQLATTILQARTRLDSLR 932 Query: 962 LI 963 LI Sbjct: 933 LI 934 >UniRef50_A0Z260 ATP-dependent helicase HepA n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z260_9GAMM Length = 917 Score = 725 bits (1871), Expect = 0.0, Method: Composition-based stats. Identities = 387/965 (40%), Positives = 558/965 (57%), Gaps = 50/965 (5%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 F +GQRW+S + ELGLG VV +D R +TL FP+ GE R YA +P+TR++ GD Sbjct: 3 EFAVGQRWVSHADVELGLGIVVELDGRRITLHFPAVGEERTYATDRAPLTRLILESGDRY 62 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 +G + V E E G+L Y+ E+ + E+ +D + P+DRL Q+D Sbjct: 63 QHINGQEYAVLERHESEGILAYLIESAAGEQEL--VSELDIDPHIQLRSPRDRLLNNQLD 120 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 ++ F LR+ K + GL G RTSL+ HQ+ IA +VG R APRVLLADEVGL Sbjct: 121 KLLDFQLRFETLKQRAHFSGSAVRGLLGARTSLLSHQVYIASEVGTRIAPRVLLADEVGL 180 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEAG+IL QQL SG A R LI+VP++L HQWLVEMLRRFNL F+LFD +R + + D Sbjct: 181 GKTIEAGLILSQQLASGRASRALILVPDSLIHQWLVEMLRRFNLAFSLFDSDRLNDLEID 240 Query: 242 AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 + F++EQL++C +++ A+WD+++VDEAHHL + IE Sbjct: 241 --SAFESEQLILCPFSLVAQNEDARLSALSAQWDMVIVDEAHHLSRQNSQEETLSRFIEA 298 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLA 361 LA H G+LLLTATPEQ G+ESHF RLRLLDP+RF D F+ EQ+ + + +L + Sbjct: 299 LAGHCSGLLLLTATPEQAGIESHFDRLRLLDPDRFSDLNTFLAEQEQFSEWNRIIELLQS 358 Query: 362 GNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT 421 G D + + L+DR+GT RVLFRNT Sbjct: 359 GQN----------------------TVTLPPGIDQDTDSASQIRQLLDRYGTGRVLFRNT 396 Query: 422 RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDN 481 R V GFP R L++ L P Y++A ++ E Sbjct: 397 RASVPGFPNRHLNSYPLEAPELYRSAS----------------------SELFPEMSFSE 434 Query: 482 ATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSII 541 W DPRV WL L + R +KVLVI A A TAL LE L R GIR A FHEG++++ Sbjct: 435 PEWLEHDPRVAWLESQLRALRPEKVLVIAANATTALALEHQLHLRAGIRCAAFHEGLTLV 494 Query: 542 ERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 ERDRAAA+FA+E GAQ L+CSEIGSEGRNFQFA H++ FDLP NPDLLEQRIGRLDRIG Sbjct: 495 ERDRAAAYFADEHGGAQALICSEIGSEGRNFQFAHHLICFDLPKNPDLLEQRIGRLDRIG 554 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 Q D+ IHVP++ +AQ VL +W+ + L+AF +C G T+ L + LA+P T Sbjct: 555 QTADVSIHVPFIRDSAQQVLFQWHDQALNAFTRSCAVGYTVLQQFLEPLNSALAAP--TS 612 Query: 662 GFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 + L+ N +L+ Q+ +GRDRLLE++S+ + ++ SI+ ++ +++FA Sbjct: 613 PIEKLLANSLALRTSLETQMREGRDRLLELNSHDANRGASIIASIQGEETPEQVLSFAEL 672 Query: 722 LFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEH 781 LFD IG++QD + +L P++ ++ + PGLSEDG + FDRE AL R+D F+T EH Sbjct: 673 LFDRIGVSQDYHTETTHLLKPTEMLITGELPGLSEDGTVVCFDRETALVRDDVSFLTLEH 732 Query: 782 PLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPV 841 PL+R + ++LS + G+S + LK+ +P GT+L+E +Y ++ AP L++ R++ TP+ Sbjct: 733 PLLREAMAVVLSSELGNSALGTLKHPKIPGGTVLLECVYSLDCMAPNYLEMGRYVDQTPL 792 Query: 842 RMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARA 901 R ++D + + + NR + + T + ++ ++ + L+ +A + Sbjct: 793 RFVIDPKCIDRGQTIGHQALNRMIGPITTATAANVMRRIRSLLEQQLKAADALAKSELEL 852 Query: 902 LIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALR 961 A +E+L AE SRL LR+VNP +RD E++ +E+ + + S++ A ALR Sbjct: 853 RKRQAVQTINEQLGAEHSRLVYLRSVNPAVRDSEISELEARIAKTLASVNDAQAVSQALR 912 Query: 962 LIVVT 966 +++ T Sbjct: 913 VVIAT 917 >UniRef50_Q0VNA6 RNA polymerase-associated protein HepA n=2 Tax=Alcanivorax RepID=Q0VNA6_ALCBS Length = 969 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 423/1005 (42%), Positives = 581/1005 (57%), Gaps = 84/1005 (8%) Query: 3 FTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTIT 62 F GQRW+S++E+ELGLG + +D R VT+ +P+ E R YA++++P++RV F+ GDTI Sbjct: 4 FIPGQRWLSESETELGLGIIKELDYRLVTVEYPAVEEERTYAKNNAPLSRVTFDSGDTIR 63 Query: 63 SHDGWQMQVEEVKEENGLLTYIGTRLDTE-ESGVALREVFLDSKLVFSKPQDRLFAGQID 121 + D ++ V +V E NGL Y+ D E + E L L + DRL + Q+ Sbjct: 64 TADEMELVVTDVNELNGLKIYMAHPKDGSPEDIQPVPETNLGHTLRLTAALDRLLSNQLS 123 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 F LR + Q + GLRG R LI HQL IA V R APRVLLADEVGL Sbjct: 124 SNRWFELRIDSLNAHCRQQQSAIKGLRGPRIDLIGHQLYIADQVANRFAPRVLLADEVGL 183 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEAG+ILHQQLL+G A+RVL++VP L HQW VEM+RRFNL F++FD ER Q + Sbjct: 184 GKTIEAGLILHQQLLTGRAKRVLVVVPSPLVHQWFVEMVRRFNLHFSIFDAERLNALQPE 243 Query: 242 A---------------------------------YNPFDTEQLVICSLDFARRSKQRLEH 268 NPF +EQL++CS DF S+ +E Sbjct: 244 TSIKDMLAQIIEEENSPNDGADEAASNLSAASGDDNPFLSEQLILCSTDFL--SECDIEQ 301 Query: 269 LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 L A+WDLLVVDEAHHL WS S +YQ +E +A+ G+LLLTATPEQLG+ESH+ARL Sbjct: 302 LAAADWDLLVVDEAHHLEWSAQQASDDYQRVETIAKQARGLLLLTATPEQLGLESHYARL 361 Query: 329 RLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQA 388 RLLDP R+ F EEQ +Y+ VA L +K ++ Sbjct: 362 RLLDPERYPSLEAFKEEQAHYQDVAALAGRLHDESKWDEALKQEAVALLP---------- 411 Query: 389 ANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAI 448 D + +S R+ + + L+DR G RV+FRNTR+ + GFP R +H I L LP +Y Sbjct: 412 ---DMDIDESNREAIQAELLDRSGPGRVMFRNTRHNIAGFPARHVHGIPLTLPDEY---- 464 Query: 449 KVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV 508 + +++ L+PE ++ + W DPRV WL + HR KVLV Sbjct: 465 --------KYDSDEEIDGHLHPETLFHD-----DRWCTLDPRVTWLENFFKQHRHDKVLV 511 Query: 509 ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSE 568 ICA TA L + G+ A+FHE M +IERDRAAA+FA++ GAQ L+CSEIGSE Sbjct: 512 ICASKNTATDLHAHCNYKLGMNVAMFHEDMDLIERDRAAAFFADDFDGAQALICSEIGSE 571 Query: 569 GRNFQFASHMVMFDLPFNPDLL--------EQRIGRLDRIGQAHDIQIHVPYLEKTAQSV 620 GRNFQFA H+V L EQRIGRLDRIGQ DIQIHVPY E+ AQ V Sbjct: 572 GRNFQFAHHLV--------LLDLPLNPDLLEQRIGRLDRIGQTDDIQIHVPYFEQHAQEV 623 Query: 621 LVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQ 680 L RWYHEG++AFEHT P G IY + L L + + L+ + R L Sbjct: 624 LFRWYHEGMNAFEHTNPAGHDIYLRSRDALEPLLTGDPEYTAIEALVDDTRAITTELHTL 683 Query: 681 LEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVL 740 LE GRDRLLE+ S GE+A+ L + D+D+ L F +FD G+ Q+D D ++L Sbjct: 684 LETGRDRLLELSSFDGERAETLISDLIAADEDSPLP-FMQRIFDRYGVEQEDHSDTAVIL 742 Query: 741 TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSST 800 P HM FP L E+G+T+T +R ALAR+D QF+TWEHP++ L+++L+ G + Sbjct: 743 KPGPHM-RDAFPSLPEEGVTMTDNRATALARDDMQFLTWEHPMVTGSLEMMLTEHRGKAA 801 Query: 801 ISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFET 860 +SLLKN + GTLL+E IY V+A APK LQ +RFLP T +R LLD NG N++ + + Sbjct: 802 VSLLKNPKIKAGTLLIEAIYTVDAVAPKHLQADRFLPTTVIRHLLDANGKNISQAISHDG 861 Query: 861 FNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSR 920 ++Q + +++ K+V + + + +L+ + + A ++I AA+ + EK + EL+R Sbjct: 862 LSQQCHKMDKPLSRKIVGSQKALLEKLLKADDISASQEAESIITAAQQKMREKQAHELAR 921 Query: 921 LEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVV 965 L+AL+A NP +R E+ A+E Q + + LD+A +L+A+R+IV Sbjct: 922 LKALQAKNPAVRHAEIDALEDQTQALEKCLDEARCQLEAVRIIVA 966 >UniRef50_B5JQV3 Type III restriction enzyme, res subunit family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQV3_9BACT Length = 953 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 383/970 (39%), Positives = 553/970 (57%), Gaps = 36/970 (3%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 + +GQR++S+ E ELGLG V VD V L FP++GE R+YA + + RV+F G+ + Sbjct: 3 TYAVGQRFVSEPEPELGLGLVEEVDGYRVGLNFPASGEKRIYAAGAAVLKRVIFREGERV 62 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 + G VE ++E +G+ Y G G + RE L + FS PQDRL +GQ++ Sbjct: 63 NTLTGASFAVEAMEEVDGIFVYSG-------EGQSAREDELVAAGSFSHPQDRLMSGQVE 115 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 + F LR RA ++ G G R LIPHQ I +V R PRVLL+DEVGL Sbjct: 116 DSEVFDLRQRALLMQNKIRSSELRGFFGGRLDLIPHQYYILKEVSSRQLPRVLLSDEVGL 175 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA--EAQ 239 GKTIEA +IL + G A+R LI+VPE L HQW VE+LRRF L F +FD+ER EA Sbjct: 176 GKTIEACLILQRLRAVGRAQRALILVPEPLVHQWFVELLRRFGLWFGIFDEERCRALEAS 235 Query: 240 HDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAI 299 ++ NPF EQLV+CS+D+ S+ R EA WD+++VDEAHHL WS + S EY + Sbjct: 236 NEGGNPFLDEQLVLCSVDYLANSEVRSWQAIEAGWDIVIVDEAHHLEWSPEEVSPEYALV 295 Query: 300 EQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML 359 E L E PG+LLLTATP QLG+ HFARLRLLDP+R+ D F EE + VA+ A + Sbjct: 296 ESLGERSPGLLLLTATPTQLGLAGHFARLRLLDPDRYSDLDTFQEEMSGFEKVAEIAAKI 355 Query: 360 LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 + ++L N + L ++ +D + L + S AR L+ L+D HGT RV+FR Sbjct: 356 IDEDELDNSDAAALQDIF-HRDQDGLKKRLADLSAKKPGARDSLIKALLDEHGTGRVVFR 414 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 NTR +KGFPKR L ++ + + + D D+ Y Sbjct: 415 NTRANMKGFPKRMYCPAPL--KSEGNQTLLAKLVRELEAESTDSESDIRY---------- 462 Query: 480 DNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMS 539 + DPR+ WL+ +L + + K L+IC A+ LE LRE I +FHE + Sbjct: 463 ----NFKGDPRLVWLVSFLKARKGVKTLLICKSRQKAIALETALRESLNISIGLFHEELQ 518 Query: 540 IIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDR 599 +++RDR AAWFAEED GAQVL+CSEIGSEGRNFQFA H+V+FDLP NP LLEQRIGRLDR Sbjct: 519 LVQRDRNAAWFAEED-GAQVLICSEIGSEGRNFQFAQHLVLFDLPINPGLLEQRIGRLDR 577 Query: 600 IGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS--- 656 IGQ IQIHVPY+ + Q V+ W H+GLD FE G L++ Sbjct: 578 IGQTSTIQIHVPYVVGSPQEVVAEWCHQGLDGFESCVHGGAEYLARFGERLVSLAIEYGS 637 Query: 657 --PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTN 714 + + + I + L A+L +GRDRLLE++S GE A+ + + + ++D+N Sbjct: 638 GKKAKRDKLEAFIDETQAFRSELSARLSKGRDRLLELNSFNGEVAKEVVREVRKAENDSN 697 Query: 715 LIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDA 774 L +F +L + G+ D++ D ++L PS H V FP L +G TF+R A+ RED Sbjct: 698 LKSFLFDLLEFYGVRVDEQEDGDVILDPS-HAYVESFPSLPAEGTLATFERRRAITREDM 756 Query: 775 QFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNR 834 FIT +H L+ + +DL+++ + G S SL ++ L +E+++V+E A L ++R Sbjct: 757 MFITQDHSLVSDAIDLLVTSEKGVSAFSLHESDDP---GLSLEVVFVLETVALSHLHVDR 813 Query: 835 FLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQ 894 FL PTP+R+++D GN+L+ + + L + + + ++ + A++ E Sbjct: 814 FLSPTPIRVVVDIRGNDLSEERDLAWVEENLEPGDINRFLERPGFSREFLEAMIGGAEEI 873 Query: 895 IEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAG 954 EK + L A + +A + L E+ RL L+ +N N+R +E+ ++ Q V +++D + Sbjct: 874 AEKRVKRLKTAFKTKAKKVLQHEIERLMDLQKINDNVRSEEIAIAKAELQGVNQAIDDSC 933 Query: 955 WRLDALRLIV 964 RLD+LRLIV Sbjct: 934 LRLDSLRLIV 943 >UniRef50_A6VZC5 Helicase domain protein n=2 Tax=Marinomonas RepID=A6VZC5_MARMS Length = 942 Score = 715 bits (1846), Expect = 0.0, Method: Composition-based stats. Identities = 371/976 (38%), Positives = 531/976 (54%), Gaps = 46/976 (4%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 + GQRW S E +LG+G +V ++ TL FP +R Y+ + + R GD + Sbjct: 1 MYQTGQRWSSRNEPDLGVGMIVDTQNKSFTLHFPDAEADRQYSNDQTSLVRRTLTVGDQL 60 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 D V EV+E N L+ Y + D L E + D L A Sbjct: 61 HFQDET-FTVLEVEEINDLIEYRISEDDD-----WLEESIIQFPRNDKNELDSLLALSPA 114 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 R F LR ++ + P GL G + L+PHQ+ +AH++ R R LL DEVG+ Sbjct: 115 RRMWFDLRRHTLEHQAANAASPVRGLMGLKAELLPHQIYLAHEIANRPKARALLCDEVGM 174 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKT+EAG+ILHQ+LL+G +RVLI+ P LQHQWLVEMLRRF+ F+L ++ Y + Sbjct: 175 GKTLEAGLILHQRLLNGLCKRVLILTPTNLQHQWLVEMLRRFHQPFSLINESVYEDFMEG 234 Query: 242 AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 NPF+ + VI +D+A + + +H+ +AEWD+++VDEAHHL W + PS YQ + + Sbjct: 235 DDNPFEQQPFVISPIDWASQHPKATQHMLDAEWDMVIVDEAHHLAWHPETPSIGYQVVAR 294 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL- 360 LA +LLL+ATPEQ G HF+RL+LLD + +HDF + +Q+ ++ A+ LL Sbjct: 295 LAAKTESLLLLSATPEQTGEREHFSRLQLLDADHYHDFEHYQTQQQAFKQAAELAEALLP 354 Query: 361 ----AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS-EDAQSARQELVSMLMDRHGTSR 415 + + D G + E + QA S S + A +E +S L+DRHGT R Sbjct: 355 FSQEDSSPAALDWNKAFGSYLQEVSAKDWFQALTSKSGAEQTEAAKEAISWLIDRHGTGR 414 Query: 416 VLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ 475 +FRNTR V GFP R LH+ L +++A +R Q Sbjct: 415 EMFRNTRAAVGGFPDRYLHSYPLDNNEHFESA-----------------------DRHVQ 451 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFH 535 W DPR WL +L ++ KVLVIC A A L L G ++A FH Sbjct: 452 PETEVPDGLWEKDPRWVWLKEFLEC-QADKVLVICHTADMAQWLNDQLTFA-GFQSADFH 509 Query: 536 EGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIG 595 E M +I RDRAAA+F ++ GAQ+L+CSEIGSEGRNFQF+ H+VM+DLP +PDLLEQRIG Sbjct: 510 EQMPLIHRDRAAAYF-ADEDGAQILVCSEIGSEGRNFQFSHHIVMYDLPEHPDLLEQRIG 568 Query: 596 RLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLA 655 RLDR+GQ +D+QIHVPYL+K+ Q L WYH L+AF T +G + ++ + L YL Sbjct: 569 RLDRLGQLNDVQIHVPYLKKSVQERLFNWYHHALNAFCRTTGSGDKVEEAFGDSLHAYLH 628 Query: 656 SPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 D DL+K HEAL Q+E+GR+RLLE+ S E+A+AL E I Q L Sbjct: 629 GQDDDT---DLLKEANIYHEALLKQMEEGRNRLLEMSSCRPEQARALIEQINNQATKG-L 684 Query: 716 IAFAMNLFDIIGIN----QDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAR 771 + + I DD L PS M++ PG+ E+G + DR A R Sbjct: 685 HHYIEQVTHAFNIYADCINDDPDRAAWFLRPSTDMMLEALPGIEEEGKMLMLDRRQASQR 744 Query: 772 EDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQ 831 ED F TWEHPLI +D + D+G T ++L ALP GT+LVE ++V+EA A +L+ Sbjct: 745 EDVAFATWEHPLITMLMDEVQGFDSGKLTSAILPIAALPEGTVLVESMFVIEATAHPRLK 804 Query: 832 LNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLG 891 L + LP TP+ L D NG L Q + + +L V + V A+++++ +LQ Sbjct: 805 LAQSLPMTPMWQLSDSNGKFLHQQFTADKWAEKLKGVPNRVAEQWVAALRKNLIEVLQAH 864 Query: 892 EAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLD 951 + + AR ++ AA+ + E+ RL L+A N IRD+++ +E+N Q+ + +D Sbjct: 865 QLNAQDQARPIVHAAKTSYQHRCQNEIERLVELKAFNDTIRDEDIERLETNMQEGLTRID 924 Query: 952 QAGWRLDALRLIVVTH 967 + RLDA+R+I+ T Sbjct: 925 EHQIRLDAIRIILTTK 940 >UniRef50_B1ZQP7 Helicase domain protein n=4 Tax=Bacteria RepID=B1ZQP7_OPITP Length = 982 Score = 707 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 389/987 (39%), Positives = 546/987 (55%), Gaps = 39/987 (3%) Query: 4 TLGQRWISDTESELGLGTVVAVD--ARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 LGQR +S+ E ELGLG V +VD AR + + FP+TGE RLYA S + RV F GD++ Sbjct: 5 VLGQRCLSEREPELGLGIVASVDRAARRLGIDFPATGEKRLYALGTSVLKRVQFRAGDSV 64 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 TS +G VE V+EE+GLL Y G +G LRE + S P +RL AGQ+D Sbjct: 65 TSREGTTFTVETVEEEDGLLVYFG-------AGRRLREDGISDVTSVSSPAERLMAGQVD 117 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 + F LR + + ++ + G G R LIPHQ I H+V R PRVLLADEVGL Sbjct: 118 PGEVFELRSQVLEAQAQFRQSEVRGFLGGRIELIPHQFYILHEVAARQIPRVLLADEVGL 177 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD 241 GKTIEA +I+ + L G A RVLI+VPE+L HQW VE+LRRFNL F+++D+ER + Sbjct: 178 GKTIEACLIVQRLLAVGQARRVLILVPESLTHQWFVELLRRFNLWFSIYDEERCTAQEQS 237 Query: 242 --AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAI 299 NPF + QL + + F ++R E A WD++VVDEAHHL W+ DA S EY + Sbjct: 238 TPGENPFLSSQLALAGVRFLAADERRREQAIAAGWDVVVVDEAHHLAWAPDAASPEYAIV 297 Query: 300 EQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML 359 E LA PG+LLLTATP QLG+ HFARLRLLDP+R++DF +FV E + Y VA + Sbjct: 298 EALARRAPGLLLLTATPTQLGLAGHFARLRLLDPDRYNDFDRFVAEAEGYATVAGVAEKI 357 Query: 360 LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 LA L+ + L + + D L Q + +E AR+ L+ L+D+HGT RV+FR Sbjct: 358 LAQKPLTPRDHAALKAIFQK-DPVRLEQHLAALAEAQPGAREALLKTLLDQHGTGRVMFR 416 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKS------------------AE 461 NTR + GFPKR+ + L + A + + +S A Sbjct: 417 NTRAAMSGFPKRKFCPVPLGVDLGAAAAGEPASAAPTDESDEDLLLELGEEPGAIVSGAA 476 Query: 462 DRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQ 521 AR + EG+ + DPR++WL+ +L HR+ KVL+IC +E Sbjct: 477 LLARAARELQAEESGTEGEIRYAFRGDPRIKWLVDFLRRHRTTKVLLICRSPRKVAAIEA 536 Query: 522 VLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMF 581 ++ER I++A+FHEG+S+++RDR AAWFAE D GAQ+LLCSEIGSEGRNFQFA H+V+F Sbjct: 537 AVQERAAIKSALFHEGLSLVQRDRNAAWFAEPD-GAQLLLCSEIGSEGRNFQFAHHLVLF 595 Query: 582 DLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT 641 DLP NP LLEQRIGRLDRIGQ I+IHVPYL +A ++ WY GL+AFE G Sbjct: 596 DLPLNPGLLEQRIGRLDRIGQTETIRIHVPYLTGSATECVIEWYQRGLNAFEAPLHGGDA 655 Query: 642 IYDSVYNDLINYLAS----PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGE 697 L+ A D L+ + E L +L+QGRDRLLE+ S Sbjct: 656 YRQEFRARLLALAAKYRGGEIDRAELDRLVADTSAFREVLARKLKQGRDRLLELASFNRA 715 Query: 698 KAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSED 757 A+++ E + D D + + + + G+ + + L PS L FP + + Sbjct: 716 TAESVIERVRAADADPRVRQVLLAVLEHFGVEVKEHEAGDLALDPSRAYL-ESFPSVPAE 774 Query: 758 GITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVE 817 G+ TF R A ARED +F++ +HPL+++ LDL++ G++ + + LL+E Sbjct: 775 GMLATFSRSRATAREDLRFLSADHPLMQDALDLLIDSPAGTAAFGTIVSDQP---NLLLE 831 Query: 818 LIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLV 877 ++V+E A + ++++FL PTPVR+L+D G +L A+ + R+ + H + Sbjct: 832 AVFVLETVADSRWRVDQFLAPTPVRVLIDLRGTDLTAERDARAVAREFEDADIHRFLERP 891 Query: 878 NAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELT 937 + +L L A A L AE RLE LR +N +R +E+ Sbjct: 892 GFDAPLLQRMLAAANGVAAARTGELKSEALARATAALDAEAQRLEDLRRLNDQVRPEEIE 951 Query: 938 AIESNRQQVMESLDQAGWRLDALRLIV 964 Q +++QA RLD++RLIV Sbjct: 952 LTRQQLQHTRTAIEQARLRLDSIRLIV 978 >UniRef50_A6DT84 ATP-dependent helicase HepA n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DT84_9BACT Length = 943 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 367/969 (37%), Positives = 556/969 (57%), Gaps = 43/969 (4%) Query: 2 PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTI 61 + GQR+ S++E ELGLG V+ + + +LFP+T RLY +PV RV G + Sbjct: 1 MYRAGQRYFSESEPELGLGVVLKHEFGNLEILFPATETRRLYVSESAPVKRVALRIGQSF 60 Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID 121 + +G ++ E++EE+G YI G +RE L + L S P+DRL G D Sbjct: 61 DA-EGEDFKITEIREEDGNFLYI------NAKGQEVREFQLPNHLSLSGPEDRLMMGSFD 113 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGL 181 F LR R + SEQ G +G R L+PHQ +A +V PRVLLADEVGL Sbjct: 114 DPHLFDLRRRTLMHQSEQLSSEIYGFQGARLDLLPHQFYVADEVSSMAKPRVLLADEVGL 173 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA--EAQ 239 GKTIEAG+ILH+ LL G RVLI++P+ LQ+QW VEM R+FNL F+L DDER+ EA Sbjct: 174 GKTIEAGLILHRLLLRGDVTRVLILLPDALQNQWFVEMYRKFNLWFSLIDDERFKAVEAN 233 Query: 240 HDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAI 299 D NPF + L+ICS ++A S + E + + EWDL++VDEAHH+ W + S EY + Sbjct: 234 PDNDNPFLDDPLIICSTEYAAASAKVSEAIVQGEWDLIIVDEAHHISWRPETVSNEYLLV 293 Query: 300 EQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML 359 E+LA+ V ++LLTATP+QLG ESHFARLRLLDP+RF+D F EQ YR + L Sbjct: 294 EELAKKVERLVLLTATPDQLGEESHFARLRLLDPDRFYDLDVFKNEQSQYRDKVKGLDKL 353 Query: 360 LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 L KL + + +++G+Q PLL+ + + Q R EL+ L+DRHGTSRV+FR Sbjct: 354 LEAEKLDAKAMKLCEKLLGDQ--HPLLERLKKEVLEGQL-RHELLRELIDRHGTSRVIFR 410 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 NTR ++ FP R I L + G ++ E + PE+ Sbjct: 411 NTRKVMENFPVRCPRPIGLEAAD-----LDFVGKEASQILEESDLDLFVCPEKNV----- 460 Query: 480 DNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMS 539 +V+W+ L +K L+IC+ +EQ +R+ ++ AVFHEG+S Sbjct: 461 ----------KVQWICETLKEKVDEKFLLICSSREKVEAIEQGIRQHMELKMAVFHEGLS 510 Query: 540 IIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDR 599 + +RDR A +F++ DTGA++L+CSEIGSEGRNFQF ++++FDLP NP LLEQRIGRLDR Sbjct: 511 LNQRDRNAVFFSQ-DTGARLLICSEIGSEGRNFQFCQNLILFDLPMNPGLLEQRIGRLDR 569 Query: 600 IGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS--- 656 IGQ DIQI PY + + +SVL +Y GLDAF G + + L + Sbjct: 570 IGQTADIQIFYPYRKSSVESVLADFYSLGLDAFARPLHGGEKMTQELKPYLEEVIVQWAE 629 Query: 657 --PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTN 714 +E +L+K + K QLE+GRD LLE++S E+ + +S+ + D++ Sbjct: 630 KIEGASEALAELLKVSSKLATETKCQLEEGRDHLLELYSFDPERGYEICQSLRKTDNEGA 689 Query: 715 LIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDA 774 L + +LFD +G++ D D + + P ++L D PGLS +G I R L RED Sbjct: 690 LFKYLEDLFDYLGVDCRDVEDAVYKIEPGQNLLC-DLPGLSREGNLIATQRAETLQREDV 748 Query: 775 QFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNR 834 +TWEHPL+R+G+D++ SG++G++ ++ + + ++++E + V+E P + +NR Sbjct: 749 ALMTWEHPLLRSGMDILSSGESGNNCFAICVDPS--SRSIILEAVLVLECLLPAKSGVNR 806 Query: 835 FLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQ 894 FLPPTP+ + +D G NL+ ++ +E + +L R V +Q + +L++ + Sbjct: 807 FLPPTPIFVRVDHRGRNLSTEIVYEECDLELGDPMRLMDKSAVK--EQLLPEMLRITQKL 864 Query: 895 IEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAG 954 ++ + +ID A+ + ++E++RL+ L+ N I+D+E+ + + + +M + ++ Sbjct: 865 AQEKSVKIIDEAQVKVKAYFASEMARLKDLQEKNSFIKDEEINDLNNAFELLMTEIPKSR 924 Query: 955 WRLDALRLI 963 R DALRL+ Sbjct: 925 IRQDALRLV 933 >UniRef50_C0QC91 RapA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC91_DESAH Length = 905 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 367/973 (37%), Positives = 518/973 (53%), Gaps = 76/973 (7%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M GQR+ S+ E ELGLG +V D+RT+T+ F ++ R Y + +P+ RV F GDT Sbjct: 2 MQLKKGQRFTSEMEPELGLGVLVTSDSRTLTVNFAASNCVRRYTTAAAPLRRVRFEVGDT 61 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 I D M +E V +GLL Y G +G + E L + S P+DRL+AG Sbjct: 62 IVFGDNRTMVIETVDNRDGLLVYGG-------AGECVPEQDLADTMSLSAPRDRLWAGIF 114 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG 180 D D F LR+ A + P G G R LIPHQ IA +V R+ PR+LLADE G Sbjct: 115 DPADTFDLRFEANRLRHAHETSPAMGFMGGRVDLIPHQFYIAGEVSNRYLPRILLADETG 174 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTIEA ++LH+ LLS RVLI+VPE+L HQW +E+ RRFNL F +FD E E + Sbjct: 175 LGKTIEACLVLHRLLLSERISRVLILVPESLVHQWFIELYRRFNLVFRIFDPELCRELER 234 Query: 241 D--AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA 298 NPF +EQLVIC LD + L +A WD++VVDEAHHL A Y Sbjct: 235 SEPGQNPFFSEQLVICCLDGMAADETSRIQLVQAGWDMVVVDEAHHLEEGGAA----YSL 290 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAM 358 +E LA G++LL+ATPEQLG +HF+ LRLLDP+R+ +F ++EE + YR A+ + Sbjct: 291 VEALATAQAGMMLLSATPEQLGRRNHFSHLRLLDPDRYTNFDDYLEESRQYRQTAETLEN 350 Query: 359 LLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLF 418 L + S + ++ L+D HG R +F Sbjct: 351 LADPGEDSQE-----------------------------------ITALLDSHGPGRAVF 375 Query: 419 RNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 RNTR +KGFP+R L T A+ A S D + + Sbjct: 376 RNTRAVIKGFPQRSGVLYPLVPKTDTTVALGRCDAPVASLSMADDDPGVFF--------- 426 Query: 479 GDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 ++EWL G L S + +KVL+ICA + A +E L ++ A F + M Sbjct: 427 ----------AKIEWLKGLLKSLKREKVLLICATSEKAAAIETALATLITMKIARFTQDM 476 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 ++++RDR+AAWFAE GA++++CSEIGSEGRNFQFA H+VMFDLP NP+L+EQRIGRLD Sbjct: 477 TLVQRDRSAAWFAEP-LGAELMICSEIGSEGRNFQFAHHLVMFDLPDNPELVEQRIGRLD 535 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ H I IHVPY + Q+VL RWY EG FE+ I+ L + D Sbjct: 536 RIGQHHPIVIHVPYAHDSRQAVLARWYREGTGIFENNISGIHQIHRQFAARLADLSDLCD 595 Query: 659 QTE-----GFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDT 713 Q D LI + R +L+ GRD+LLE++S KA+ L ++I E D D Sbjct: 596 QAGQVPYGALDQLIADTRTFAAETSKRLKSGRDKLLELNSFRPRKAEQLVKTICETDQDQ 655 Query: 714 NLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALARED 773 ++ F +F I+ + L + VP FPG DG+ +TFDR VA+ R+D Sbjct: 656 SIDLFMAKIFKFYAISPEPIMARTFRLEVFNSAGVP-FPGFKGDGMIVTFDRTVAVTRDD 714 Query: 774 AQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLN 833 F+TW+HP++ ++L L D G++ I+ + +L+E +Y +E AP+ L +N Sbjct: 715 IVFLTWDHPMVTGAMELFLGSDHGNAAIAEVNGTG--KFEILLESVYTLECVAPRALHMN 772 Query: 834 RFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEA 893 RFL TP+R L+D N NL+ + L+ R + +Q + +L G Sbjct: 773 RFLARTPIRTLVDHNLTNLSQDRSWALTAASLSTPARSWLGQFPEIKEQLLPELLAAGRR 832 Query: 894 QIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQA 953 E++A +I A+ ++ + E +RLE L+ +NP IR+DE+ + ++ +DQA Sbjct: 833 FSEQAAARVISRAKAAVEKVVGGEAARLERLKRINPAIREDEIRRAKDEATTLVIHIDQA 892 Query: 954 GWRLDALRLIVVT 966 RLD+LRLI V+ Sbjct: 893 RLRLDSLRLIKVS 905 >UniRef50_C9RJU1 Helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJU1_FIBSS Length = 995 Score = 661 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 324/1017 (31%), Positives = 500/1017 (49%), Gaps = 75/1017 (7%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT 60 M F +GQR++S E LGLG V V RTV +LFPS G+ R+Y ++P+ R + G+T Sbjct: 1 MMFKIGQRYVSQAEPTLGLGIVSEVQGRTVKILFPSIGQARIYRTDEAPIERFVLQVGET 60 Query: 61 ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI 120 + S G V+ V+E+ G++ Y+G +G ++E L +K+ ++P A Sbjct: 61 VKSEKGVSFVVDSVREDAGIMVYVG------RNGKEMKESELSAKISTARPAVLFKALAD 114 Query: 121 DR--MDRFALRYR-ARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP-RVLLA 176 D R LR+ A + + P G+ G R ++IPHQ + + R++L+ Sbjct: 115 DEVCSSRDFLRHEDAMEMYYKWISSPVRGMIGPRVNMIPHQYYLCYRACSSSTLPRLMLS 174 Query: 177 DEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA 236 DEVGLGKTIEAGMI H G +R L+IVPETL+HQW++EM RRFN F L D+ Sbjct: 175 DEVGLGKTIEAGMIWHALKSRGRIQRTLVIVPETLKHQWMIEMKRRFNQLFTLVDEGYIR 234 Query: 237 ------EAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 NPF +I S+DF +E L + WD+ ++DEAHHLV + Sbjct: 235 GLFVGVAKDETKPNPFMQSNDIIVSIDFLMAQPALIEDLLKTNWDMTIIDEAHHLVCEDG 294 Query: 291 APSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR 350 S EY ++ GVLLLT TP QL ES F RL++LDP RF D+ F+++Q+ Y Sbjct: 295 FTSHEYMLANRVIGRSKGVLLLTGTPLQLHPESQFNRLKMLDPVRFADYNDFIKDQEAYL 354 Query: 351 PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDR 410 + + L ++ + I P L+ NS S A E + ++D Sbjct: 355 KLVRDLNKLPTDPNHHMSWDDLYECVPKNSQIRPWLEQENSKSMTAG----EWMRRIVDG 410 Query: 411 HGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP 470 GT V+FRNTR GV GFPKR L I L Y+ + V+ S + + +L Sbjct: 411 MGTGSVVFRNTRKGVGGFPKRVLDEIPLEPNPAYREMVDVAADRDLEASTDIQENGLLCT 470 Query: 471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIR 530 + W D R WL G+L ++++KVL+IC LE +L E G Sbjct: 471 RF---------SDAWAMDERFVWLKGFLKEYKNEKVLLICESIQVVQALETLLLEFLGEG 521 Query: 531 -AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDL 589 +FHE MSI+ RD+AAA F++ D GA +L+ SEIGSEGRNFQF+ H+V+FDLP + L Sbjct: 522 AFVMFHEDMSIMARDKAAANFSKPD-GANLLIASEIGSEGRNFQFSHHLVLFDLPLDAAL 580 Query: 590 LEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYND 649 +EQRIGRLDRIGQ DI IHVPY++ + Q V+ RWY+EGL++F +G ++ Sbjct: 581 VEQRIGRLDRIGQDKDIIIHVPYVKGSGQEVMFRWYNEGLNSFGAPLMSGGELFLKYTES 640 Query: 650 LINYLASPDQTEG--FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIE 707 LI LA+P + +++I ++ E ++ +E GRDRLLE +S EKA+ + + I Sbjct: 641 LIEALATPRASLENFVENVIPQVKKDCEQMRKHIENGRDRLLEFNSRNPEKAKEITDEIR 700 Query: 708 EQDDDTNLIAFAMNLFDIIGINQDDRG-DNMIVLTPSDHMLVPDFPGLSE---------- 756 E D + L + G++ + + ++T + PG+ + Sbjct: 701 ELDAEPELKNLVFDSLMNRGLDVEKSSVQDCFLITMGPQVEAGSVPGMPDLAMAAATAGG 760 Query: 757 --------------------------DGITITFDREVALAREDAQFITWEHPLIRNGLDL 790 +T+TFDR+VA+ +D +FI+ +HPL + D Sbjct: 761 GRVNSQTDLCGEGGGDGDGDGRVSGGTCMTVTFDRDVAMTHDDIEFISLDHPLAQGVFDY 820 Query: 791 ILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGN 850 S G+ + ++ N L L+++ + VE ++ P ++L++ G Sbjct: 821 ETSFGRGTVSCAIWPNSGLRG--LMMQYNFAVELPVSEEWGCADIAGPKYFKVLVNAKGE 878 Query: 851 NLAAQVEFETFNRQLNAVNRHTGSKLVNA-VQQDVHAILQLGEAQIEKSARALIDAARNE 909 N++ + + L V G+ V+ ++ L + + A+ + A N Sbjct: 879 NMSEHF-EDLSDAALKDVGVPQGNAAVDMTLRYFAKDGLAKARLIVSEQAKKYAEEAANA 937 Query: 910 ADEKLSAELSRLEALRAVNPNIRDDE-LTAIESNRQQVMESLDQAGWRLDALRLIVV 965 + + E R+ L ++ E L + N Q+ + + RLDA+RL+V Sbjct: 938 VEARSEQEYQRMNHLLSMRGKAGTSEALKQLRKNVQERKKIVANPQLRLDAIRLVVC 994 >UniRef50_O61845 Temporarily assigned gene name protein 192 (Fragment) n=5 Tax=root RepID=O61845_CAEEL Length = 2963 Score = 583 bits (1503), Expect = e-164, Method: Composition-based stats. Identities = 125/727 (17%), Positives = 237/727 (32%), Gaps = 81/727 (11%) Query: 70 QVEEVKEENGLLTYIGTRLDTEESGVA--LREVFLDSKLVFSKPQDRLFAGQIDRMDRFA 127 V+ + E++G + V E+ K+ + + + +I Sbjct: 1115 VVDLITEDDGQEFVLIKWKSLGYEEVTWEPIEMIPADKVELWRERQVIDPAKI------- 1167 Query: 128 LRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVGLGKTI 185 R + R E +M S + SL +Q + + +LADE+GLGKT+ Sbjct: 1168 -REKQRPEPEEWKKMSTSKVWKNGNSLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTV 1226 Query: 186 EAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNP 245 + L + G L++VP + W+ E ++ ++ YA Y Sbjct: 1227 QTITFLSRIYDYGIHGPFLVVVPLSTIQNWVREFETWTDMNAIVYHGSAYAREVLQQYEV 1286 Query: 246 FD---------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 F +I + + +E L + W + V+DEAH L ++ Sbjct: 1287 FYDKRHCGAKNWKKNFVKIDALITTFETVVSD---VEFLKKIPWRVCVIDEAHRL---KN 1340 Query: 291 APSREYQAIEQL-AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY 349 + + L A + +LLT TP Q ++ F+ L L P +F + A F+E+ + Sbjct: 1341 RNCKL--LVNGLLAFRMEHRVLLTGTPLQNNIDELFSLLNFLHPQQFDNSATFLEQFGSC 1398 Query: 350 RPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMD 409 + + E +L+ D E + ++E + + Sbjct: 1399 QTDDQVQK-------------------LQEILKPMMLRRLKEDVEKSLGPKEETIIE-VQ 1438 Query: 410 RHGTSRVLFRNTRNGV-----KGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRA 464 + +R KG L + + L ++G A + A Sbjct: 1439 LSDMQKKFYRAILERNFSHLCKGTSAPSLMNVMMELRKCCNHPFLINGAEEAIMNDFRLA 1498 Query: 465 RDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQV 522 +P+ + E + +V + L R KVL+ LE+ Sbjct: 1499 ----HPD--WDEETLAHKALIQASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEF 1552 Query: 523 LREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMF 581 L + R A F++E++ LLC+ G G N A +++F Sbjct: 1553 LIS-MSYPFERIDGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIF 1611 Query: 582 DLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT 641 D +NP Q R RIGQ ++++ T + + L + + Sbjct: 1612 DSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTA 1671 Query: 642 IYDS---VYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDR--LLEIHSNGG 696 + + + L D + +E + Q R + LE G Sbjct: 1672 LKAEGTALSKKDVEELLKKGAYGSIMDEENESSKFNEEDIETILQRRTQTITLEAGQKGS 1731 Query: 697 EKAQALAESIEEQDDDTNL--IAFAMNLFDIIGINQDDRG---DNMIVLTPSDHMLVPDF 751 A+A S + DD ++ F + ++ + D ++ F Sbjct: 1732 LFAKATFNSSHNKGDDIDIDDPEFWTKWAEKAQVDVEKATATPDGRELIIEEPRKRTKRF 1791 Query: 752 PGLSEDG 758 ++G Sbjct: 1792 EENKDEG 1798 >UniRef50_B7Z002 Kismet, isoform C n=2 Tax=Fungi/Metazoa group RepID=B7Z002_DROME Length = 5517 Score = 577 bits (1487), Expect = e-163, Method: Composition-based stats. Identities = 110/669 (16%), Positives = 222/669 (33%), Gaps = 71/669 (10%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVG 180 R + + R + ++ + + SL P+QL + + +LADE+G Sbjct: 1998 PQRSEWKSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMG 2057 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTI++ +H G L+I P + W E ++ ++ ++ Sbjct: 2058 LGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHGSVTSKQMI 2117 Query: 241 DAYNPFDT------------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 Y + ++I + + L W L V+DEAH L Sbjct: 2118 QDYEYYYKTESGKVLKEPIKFNVLITTFEMIVTD---YMDLKAFNWRLCVIDEAHRL--- 2171 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 ++ + + + QL ++ +LL+ TP Q + F+ L L+P++F +F+ E + Sbjct: 2172 KNRNCKLLEGLRQL--NLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGS 2229 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM 408 R + +E+N L ++ +L+ D E + + ++E + + Sbjct: 2230 LR---------------TEEEVNKLQALLK----PMMLRRLKDDVEKSLAPKEETIIE-V 2269 Query: 409 DRHGTSRVLFRNTRNGVKGFPKRE--------LHTIKLPLPTQYQTAIKVSGIMGARKSA 460 + + +R F K+ L + L ++G + Sbjct: 2270 ELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEE-QIQY 2328 Query: 461 EDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQ 518 + +++ PE Y+ ++ + L + +VL+ Sbjct: 2329 DFKSQHGEDPESYYKN-------LILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDI 2381 Query: 519 LEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASH 577 LE L R+ + R A +++ + LLC++ G G N A Sbjct: 2382 LEDYLVYRK-YPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADT 2440 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC- 636 ++++D +NP Q R RIGQ ++I+ T + + L + Sbjct: 2441 VIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQ 2500 Query: 637 -----PTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEI 691 + + I L D + E + + R +++ + Sbjct: 2501 SMNTQGSKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSILKRRTQVITM 2560 Query: 692 HSNGGE--KAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDD-RGDNMIVLTPSDHMLV 748 S G + A S D + F + I+ D D L S+ Sbjct: 2561 ESEKGSTFSKASFAASGNRSDITIDDPDFWTKWAKKVDIDPDACERDETEDLVLSEPRRR 2620 Query: 749 PDFPGLSED 757 + Sbjct: 2621 TQIKRYGHE 2629 >UniRef50_Q9VPL9 Kismet, isoform A n=10 Tax=Sophophora RepID=Q9VPL9_DROME Length = 5322 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 110/669 (16%), Positives = 222/669 (33%), Gaps = 71/669 (10%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVG 180 R + + R + ++ + + SL P+QL + + +LADE+G Sbjct: 1998 PQRSEWKSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMG 2057 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTI++ +H G L+I P + W E ++ ++ ++ Sbjct: 2058 LGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHGSVTSKQMI 2117 Query: 241 DAYNPFDT------------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 Y + ++I + + L W L V+DEAH L Sbjct: 2118 QDYEYYYKTESGKVLKEPIKFNVLITTFEMIVTD---YMDLKAFNWRLCVIDEAHRL--- 2171 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 ++ + + + QL ++ +LL+ TP Q + F+ L L+P++F +F+ E + Sbjct: 2172 KNRNCKLLEGLRQL--NLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGS 2229 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM 408 R + +E+N L ++ +L+ D E + + ++E + + Sbjct: 2230 LR---------------TEEEVNKLQALLK----PMMLRRLKDDVEKSLAPKEETIIE-V 2269 Query: 409 DRHGTSRVLFRNTRNGVKGFPKRE--------LHTIKLPLPTQYQTAIKVSGIMGARKSA 460 + + +R F K+ L + L ++G + Sbjct: 2270 ELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEE-QIQY 2328 Query: 461 EDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQ 518 + +++ PE Y+ ++ + L + +VL+ Sbjct: 2329 DFKSQHGEDPESYYKN-------LILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDI 2381 Query: 519 LEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASH 577 LE L R+ + R A +++ + LLC++ G G N A Sbjct: 2382 LEDYLVYRK-YPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADT 2440 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC- 636 ++++D +NP Q R RIGQ ++I+ T + + L + Sbjct: 2441 VIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQ 2500 Query: 637 -----PTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEI 691 + + I L D + E + + R +++ + Sbjct: 2501 SMNTQGSKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSILKRRTQVITM 2560 Query: 692 HSNGGE--KAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDD-RGDNMIVLTPSDHMLV 748 S G + A S D + F + I+ D D L S+ Sbjct: 2561 ESEKGSTFSKASFAASGNRSDITIDDPDFWTKWAKKVDIDPDACERDETEDLVLSEPRRR 2620 Query: 749 PDFPGLSED 757 + Sbjct: 2621 TQIKRYGHE 2629 >UniRef50_C4Q1A8 Expressed protein n=1 Tax=Schistosoma mansoni RepID=C4Q1A8_SCHMA Length = 3580 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 110/640 (17%), Positives = 207/640 (32%), Gaps = 68/640 (10%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVL 204 + L +Q+ + + +LADE+GLGKT+++ L + + L Sbjct: 1164 VYKNNNKLRDYQVEGVNWLTFCWYHHRNCILADEMGLGKTVQSVTFLLEIFKANVEGPFL 1223 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD-------------TEQL 251 IIVP + W E + ++ + + Y F + Sbjct: 1224 IIVPLSTVGNWQREFENWSDFNVIIYHGSSVSRSMIQEYEMFYRKRTSGAPRHDIYKFHV 1283 Query: 252 VICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLL 311 ++ + + +E + W V+DEAH L ++ + + + L + +L Sbjct: 1284 IVTTFEVLMND---IEFFGQIHWAAAVIDEAHRL---KNKKCKLGEGLRYL--DLDHRVL 1335 Query: 312 LTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELN 371 LT TP Q +E F L L+P +F A FV E + Sbjct: 1336 LTGTPLQNNVEELFGLLNFLEPEKFSCSATFVAEYGELKTEEQV---------------- 1379 Query: 372 MLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKR 431 E + +L+ D E + + ++E V ++ + +R F + Sbjct: 1380 ---ERLKTVLKPMMLRRLKEDVEKSLAPKEETVVE-VELTNIQKKYYRAIMERNFSFLCK 1435 Query: 432 E-------LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATW 484 L I + L + G A S + L + + T Sbjct: 1436 GSSTNAPNLMNIMMELRKCCNHPFLIKGAEDAILSEFQANDNTLSEDDL------TFRTM 1489 Query: 485 WNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 ++ + L R KVL+ LE L +G + + Sbjct: 1490 VYASGKLVLIHKLLPKLRADGHKVLIFSQMIRVLDILEDYLV-HQGFQFERIDGRIHGPL 1548 Query: 543 RDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 R A F+ + LLC++ G G N A ++++D +NP Q R RIGQ Sbjct: 1549 RQEAIDRFSIDPDKFVFLLCTKAGGLGINLTAADVVIIYDSDWNPQNDLQAQARCHRIGQ 1608 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC---PTGRTIYDSVYNDLINYLASPDQ 659 ++++ T + + L + + I L Sbjct: 1609 QKMVKVYRLITRNTYEREMFDRASLKLGLDRAVLQSMGSKEARQAQMTKKEIEDLLKKGA 1668 Query: 660 TEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL---- 715 D K + E Q+ Q R R++++ G E + + D+ +++ Sbjct: 1669 YGALMDDDKAGEDFCEEDIDQILQSRARVVQLEQ-GKENSTFSKATFSMSDNRSDIALDD 1727 Query: 716 IAFAMNLFDIIGINQDDR-GDNMIVLTPSDHMLVPDFPGL 754 F G+++ ++IV TP + + Sbjct: 1728 PNFWQKWAKKAGVDETALVMKDLIVQTPRQRRQTSRYSSM 1767 >UniRef50_Q8TD26 Chromodomain-helicase-DNA-binding protein 6 n=30 Tax=Euteleostomi RepID=CHD6_HUMAN Length = 2715 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 108/640 (16%), Positives = 197/640 (30%), Gaps = 74/640 (11%) Query: 134 KYSSEQFRMPYSGLRGQR-----TSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIE 186 K+ + L R L +QL + + +LADE+GLGKTI+ Sbjct: 436 KHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQ 495 Query: 187 AGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF 246 + L + L G LII P + W E + ++ + + Y Sbjct: 496 SITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMV 555 Query: 247 D------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSR 294 +VI + + L + W +++DEAH L ++ + Sbjct: 556 YRDAQGNPLSGVFKFHVVITTFEMILADCPE---LKKIHWSCVIIDEAHRL---KNRNCK 609 Query: 295 EYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVAD 354 + ++ +A +LLT TP Q +E F+ L L+P++F F+EE + + Sbjct: 610 LLEGLKLMAL--EHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDLKTEEQ 667 Query: 355 AVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTS 414 + + +L+ D E + +QE + ++ Sbjct: 668 V-------------------KKLQSILKPMMLRRLKDDVEKNLAPKQETIIE-VELTNIQ 707 Query: 415 RVLFRNTRNGVKGFPKRE--------LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARD 466 + +R F + L + L ++G + Sbjct: 708 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 767 Query: 467 MLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLR 524 P+ Q ++ + L KVL+ LE L Sbjct: 768 PDAPDFQLQAM-------IQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLI 820 Query: 525 EREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDL 583 +R + R A F + D+ LLC+ G G N A ++FD Sbjct: 821 QRR-YTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDS 879 Query: 584 PFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPT----- 638 +NP Q R RIGQ+ ++++ + + + L + Sbjct: 880 DWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 939 Query: 639 GRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEK 698 G + + L D + E Q+ Q R + I S G Sbjct: 940 GTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGS 999 Query: 699 AQALAESIEE---QDDDTNLIAFAMNLFDIIGINQDDRGD 735 A A + D + F I ++ + + + Sbjct: 1000 TFAKASFVASGNRTDISLDDPNFWQKWAKIAKLDTEAKNE 1039 >UniRef50_Q9P2D1 Chromodomain-helicase-DNA-binding protein 7 n=26 Tax=Euteleostomi RepID=CHD7_HUMAN Length = 2997 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 108/680 (15%), Positives = 205/680 (30%), Gaps = 76/680 (11%) Query: 112 QDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQR-----TSLIPHQLNIAHDVG 166 + + +I+ ++ R + + R L +QL + + Sbjct: 921 RQDIDQAKIEEFEKLMSREPETERVERPPADDWKKSESSREYKNNNKLREYQLEGVNWLL 980 Query: 167 RRHAP--RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN 224 +LADE+GLGKTI++ L++ L G L+I P + W E Sbjct: 981 FNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTE 1040 Query: 225 LRFALFDDERYAEAQHDAYNPF------------DTEQLVICSLDFARRSKQRLEHLCEA 272 L ++ + + Y + +I + + L Sbjct: 1041 LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPE---LRNI 1097 Query: 273 EWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLD 332 W +V+DEAH L ++ + + ++ + + +LLT TP Q +E F+ L L+ Sbjct: 1098 PWRCVVIDEAHRL---KNRNCKLLEGLKMM--DLEHKVLLTGTPLQNTVEELFSLLHFLE 1152 Query: 333 PNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD 392 P+RF F++E + + + +L+ D Sbjct: 1153 PSRFPSETTFMQEFGDLKTEEQVQK-------------------LQAILKPMMLRRLKED 1193 Query: 393 SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRE--------LHTIKLPLPTQY 444 E + ++E + ++ + +R F + L + L Sbjct: 1194 VEKNLAPKEETIIE-VELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCC 1252 Query: 445 QTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR-- 502 ++G + P+ Q ++ + L + Sbjct: 1253 NHPYLINGAEEKILEEFKETHNAESPDFQLQAM-------IQAAGKLVLIDKLLPKLKAG 1305 Query: 503 SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLL 561 +VL+ LE L +R + R A F++ D+ LL Sbjct: 1306 GHRVLIFSQMVRCLDILEDYLIQRR-YPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 1364 Query: 562 CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVL 621 C+ G G N A ++FD +NP Q R RIGQ+ ++I+ + + + Sbjct: 1365 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREM 1424 Query: 622 VRWYHEGLDAFEHTCPTGRTIY------DSVYNDLINYLASPDQTEGFDDLIKNCREQHE 675 L + + + I L D + E Sbjct: 1425 FDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCE 1484 Query: 676 ALKAQLEQGRDRLLEIHSNGGEKAQALAESIEE---QDDDTNLIAFAMNLFDIIGINQDD 732 Q+ R + I S G A A + D + F ++ D Sbjct: 1485 EDIDQILLRRTHTITIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDA 1544 Query: 733 R-GDNMIVLTPSDHMLVPDF 751 G N +V+ Sbjct: 1545 LNGRNNLVIDTPRVRKQTRL 1564 >UniRef50_B4LU61 GJ17250 n=6 Tax=cellular organisms RepID=B4LU61_DROVI Length = 5552 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 109/669 (16%), Positives = 217/669 (32%), Gaps = 71/669 (10%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVG 180 R + R R + + ++ + + SL P+QL + + +LADE+G Sbjct: 2181 PLRCEWKSRKRPHPEQWKKLEKTPVYKSGNSLRPYQLEGLNWLKFSWYNSHNCILADEMG 2240 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTI++ +H G L+I P + W E ++ ++ ++ Sbjct: 2241 LGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHGSVTSKQMI 2300 Query: 241 DAYNPFDT------------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 Y + ++I + + L W L V+DEAH L Sbjct: 2301 QDYEFYYKTDSGKVLKEPIKFNVLITTFEMIVTD---YMDLKAFNWRLCVIDEAHRL--- 2354 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 ++ + + + QL+ +LL+ TP Q + F+ L L+P++F +F+ E + Sbjct: 2355 KNRNCKLLEGLRQLSL--EHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGS 2412 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM 408 R + + + +L+ D E + + ++E + + Sbjct: 2413 LRTEEEVNKLQVL-------------------LKPMMLRRLKDDVEKSLAPKEETIIE-V 2452 Query: 409 DRHGTSRVLFRNTRNGVKGFPKRE--------LHTIKLPLPTQYQTAIKVSGIMGARKSA 460 + + +R F K+ L + L ++G + Sbjct: 2453 ELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEE-QIQY 2511 Query: 461 EDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQ 518 + +A+ PE Y+ ++ + L + +VL+ Sbjct: 2512 DFKAQHGEDPESYYKN-------LILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDI 2564 Query: 519 LEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASH 577 LE L R+ + R A +++ + LLC++ G G N A Sbjct: 2565 LEDYLVYRK-YPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADT 2623 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC- 636 ++++D +NP Q R RIGQ ++I+ T + + L + Sbjct: 2624 VIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQ 2683 Query: 637 -----PTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEI 691 + + I L D + E + + R +++ + Sbjct: 2684 SMNTHGSKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSILKRRTQVITM 2743 Query: 692 HSNGGE--KAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDD-RGDNMIVLTPSDHMLV 748 S G + A S D + F + I+ D D L S+ Sbjct: 2744 ESEKGSTFSKASFAASGNRSDITIDDPDFWTKWAKRVDIDPDACERDETEDLVLSEPRRR 2803 Query: 749 PDFPGLSED 757 + Sbjct: 2804 TQIKRYGHE 2812 >UniRef50_UPI000180D3C0 PREDICTED: similar to chromodomain helicase DNA binding protein 7 n=1 Tax=Ciona intestinalis RepID=UPI000180D3C0 Length = 4218 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 119/711 (16%), Positives = 223/711 (31%), Gaps = 87/711 (12%) Query: 81 LTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQF 140 L Y + + EE + +S+ F P ++ + + L Sbjct: 1525 LAYEDSTWEEEEDIDKNKIFEFESRCKFRPPVKKM--SRPHKDMWKRLSED--------- 1573 Query: 141 RMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLSG 198 + + L +Q + + +LADE+GLGKTI++ L + G Sbjct: 1574 ----NTVFQNNNRLRDYQFEGINWLLFNWYNKRNCILADEMGLGKTIQSITFLQKIFDHG 1629 Query: 199 AAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF------------ 246 L++ P + W E + ++ + + Y F Sbjct: 1630 IRGPFLVVAPLSTIANWQREFESWTTINAVVYHGSQTSRDMLHTYEWFCRDENLDEIPGC 1689 Query: 247 DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHV 306 VI + + HL + +W L++DEAH L ++ + +++ + + Sbjct: 1690 YKVHAVITTYEMIVLDTP---HLRDVDWRCLIIDEAHRL---KNLSCKLVESLRFM--QL 1741 Query: 307 PGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLS 366 +LLT TP Q +E FA L L P F+ F E N + Sbjct: 1742 EHKVLLTGTPLQNNVEELFALLSFLQPETFNCQQAFSLEFGNLKNNTQV----------- 1790 Query: 367 NDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVK 426 E + E +L+ D E + + +QE + ++ + +R Sbjct: 1791 --------EKLQELLKPMMLRRLKEDVEKSLAPKQETIIE-VELTSIQKKYYRAILERNF 1841 Query: 427 GFPKRE--------LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 F + L + L + G ++ R+ + Sbjct: 1842 EFLAKGTTGGNVPNLMNTMMELRKCCNHPYLIKGAEDK----------IMQEHRVMSNEQ 1891 Query: 479 GDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 ++ + L + KVL+ LE L +R Sbjct: 1892 NPLQAMIQSSGKLVLIDKLLPRLKQGGHKVLIFSQMVRVLDILEDYLVQRSYF-YERIDG 1950 Query: 537 GMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIG 595 + ER A F+ + + LLC+ G G N A +++FD +NP Q Sbjct: 1951 CIRGNERQMAIDRFSRKGSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQA 2010 Query: 596 RLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDL----I 651 R RIGQ ++I+ + + + L + + D + + L + Sbjct: 2011 RCHRIGQQKPVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSISGRQDQITSQLSKTEV 2070 Query: 652 NYLASPDQTEGFDDLIKNCREQHEALKAQL--EQGRDRLLEIHSNGGEKAQA-LAESIEE 708 L D + E Q+ + LE G ++A ++++ Sbjct: 2071 EDLLKRGAYGAIMDDDDAASKFCEEDIDQILDRRAHTVTLESGEKGSTFSKASFVSNVDQ 2130 Query: 709 QDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHML-VPDFPGLSEDG 758 D + F ++ DN ++L H F G S+D Sbjct: 2131 SDISLDDPNFWEKWAKKADLDLQQLKDNKLILEIPRHRKQTRRFGGNSDDA 2181 >UniRef50_Q29NV9 GA17619 n=5 Tax=Eukaryota RepID=Q29NV9_DROPS Length = 5605 Score = 569 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 112/669 (16%), Positives = 222/669 (33%), Gaps = 71/669 (10%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVG 180 R + R R + ++ + + SL P+QL + + +LADE+G Sbjct: 2107 PLRCEWKSRKRPPPEQWKKLEKTPIYKGGNSLRPYQLEGLNWLKFSWFNTHNCILADEMG 2166 Query: 181 LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 LGKTI++ +H G L+I P + W E ++ ++ ++ Sbjct: 2167 LGKTIQSLTFVHSVYEFGIRGPFLVIAPLSTIPNWQREFEGWTDMNIVVYHGSVTSKQMI 2226 Query: 241 DAYNPFDT------------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 Y + ++I + + L + W L V+DEAH L Sbjct: 2227 QDYEFYYKTDSGKVLKEPIKFNVLITTFEMIVTD---YMDLKQFNWRLCVIDEAHRL--- 2280 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 ++ + + + QL ++ +LL+ TP Q + F+ L L+P +F +F+ E N Sbjct: 2281 KNRNCKLLEGLRQL--NLEHRVLLSGTPLQNNISELFSLLNFLEPAQFSSQEEFMTEFGN 2338 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM 408 R + +E+N L ++ +L+ D E + + ++E + + Sbjct: 2339 LR---------------NEEEVNKLQALLK----PMMLRRLKDDVEKSLAPKEETIIE-V 2378 Query: 409 DRHGTSRVLFRNTRNGVKGFPKRE--------LHTIKLPLPTQYQTAIKVSGIMGARKSA 460 + + +R F K+ L + L ++G + Sbjct: 2379 ELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEE-QIQY 2437 Query: 461 EDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQ 518 + +++ PE Y+ ++ + L + +VL+ Sbjct: 2438 DFKSQHGEDPESYYKN-------LILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDI 2490 Query: 519 LEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASH 577 LE L R+ + R A +++ + LLC++ G G N A Sbjct: 2491 LEDYLVYRK-YPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADT 2549 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC- 636 ++++D +NP Q R RIGQ ++I+ T + + L + Sbjct: 2550 VIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQ 2609 Query: 637 -----PTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEI 691 + + I L D + E + + R +++ + Sbjct: 2610 SMNTQGSKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSILKRRTQVITM 2669 Query: 692 HSNGGE--KAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDD-RGDNMIVLTPSDHMLV 748 S G + A S D + F + I+ D D L S+ Sbjct: 2670 ESEKGSTFSKASFAASGNRSDITIDDPDFWTKWAKKVDIDPDACERDETEDLVLSEPRRR 2729 Query: 749 PDFPGLSED 757 + Sbjct: 2730 TQIKRYGHE 2738 >UniRef50_Q4SNT6 Chromosome 15 SCAF14542, whole genome shotgun sequence n=1 Tax=Tetraodon nigroviridis RepID=Q4SNT6_TETNG Length = 2331 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 114/684 (16%), Positives = 213/684 (31%), Gaps = 79/684 (11%) Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQR-----TSLIPHQLNIAHDVGRRH--A 170 G+++ + R K + + L R +L +QL + + Sbjct: 863 GKVEEFKKIQNRQPRLKRTPRPSPGSWKKLEESREYKNANTLREYQLEGVNWLLFNWYNR 922 Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 +LADE+GLGKTI++ +L + +G L+I P + W E N+ ++ Sbjct: 923 QNCILADEMGLGKTIQSITLLSEIYAAGVQGPFLVIAPLSTITNWEREFSTWTNMNAIVY 982 Query: 231 DDERYAEAQHDAYNPF------------DTEQLVICSLDFARRSKQRLEHLCEAEWDLLV 278 + Y + +I + + L E W ++ Sbjct: 983 HGSLASRQMIQQYEMYCKDEKDHLIPGAYKFDALITTFEMILSDCPE---LREISWRCVI 1039 Query: 279 VDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHD 338 +DEAH L ++ + +++ + + +LLT TP Q +E F+ L L+P +F Sbjct: 1040 IDEAHRL---KNRNCKLLDSLKMM--DLEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPS 1094 Query: 339 FAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQS 398 +F+ E + + + +L+ D E + Sbjct: 1095 EIEFLREFGDLKTEEQVQK-------------------LQSILKPMMLRRLKEDVEKNLA 1135 Query: 399 ARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRE---------LHTIKLPLPTQYQTAIK 449 +QE + ++ + +R F L + L Sbjct: 1136 PKQETIIE-VELTDVQKKYYRAILERNFSFLSLGANSNSNVPNLLNTMMELRKCCNHPYL 1194 Query: 450 VSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVL 507 ++G + D P+ Q ++ L L + KVL Sbjct: 1195 INGAEEKIVAELREVYDPSAPDFHLQA-------LIRSAGKLVLLDKLLPRLKAGGHKVL 1247 Query: 508 VICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIG 566 + LE L + + R A F++ D+ LLC+ G Sbjct: 1248 IFSQMVRCLDILEDYLINKR-YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAG 1306 Query: 567 SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYH 626 G N A V+FD +NP Q R RIGQ+ ++++ + + ++ Sbjct: 1307 GLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKAS 1366 Query: 627 EGLDAFEHTCPTGRTIYD-------SVYNDLINYLASPDQTEGFDDLIKNCREQHEALKA 679 L + D I L D E Sbjct: 1367 LKLGLDRAVLQSMSGNKDSNVNGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDID 1426 Query: 680 QLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDT---NLIAFAMNLFDIIGINQD--DRG 734 Q+ Q R + I S G + A + ++ + F I+ D +R Sbjct: 1427 QILQRRATTITIESEGKGSTFSKASFVASENRTDIALDDPEFWQKWAKKADIDVDSMNRK 1486 Query: 735 DNMIVLTPSDHMLVPDFPGLSEDG 758 + +++ TP + L +G Sbjct: 1487 NTLVIDTPRVRKQTRQYSSLRGEG 1510 >UniRef50_Q5TQJ2 AGAP008482-PA (Fragment) n=94 Tax=cellular organisms RepID=Q5TQJ2_ANOGA Length = 4793 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 110/731 (15%), Positives = 227/731 (31%), Gaps = 87/731 (11%) Query: 67 WQMQVEEVKEENGLLT--YIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR-- 122 + V E+ ++ G Y+ + E+ D+L Q + Sbjct: 1770 RVLDVSELVDDEGKTVKHYLVKWKSLPYED-STWELE--------DDVDQLKIEQYYKFN 1820 Query: 123 --MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADE 178 + + + R + + +P S L P+QL + + +LADE Sbjct: 1821 KIPPKSEWKTKKRPHPDQWKALPESPTFKGGNKLRPYQLEGLNWLRYSWYKGNNCILADE 1880 Query: 179 VGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEA 238 +GLGKTI++ ++ G L+I P + W E + ++ + Sbjct: 1881 MGLGKTIQSLTFVNSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTEMNVIVYHGSATSRQ 1940 Query: 239 QHDAYNP------------FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLV 286 Y ++I + + + L W V+DEAH L Sbjct: 1941 MIQDYEVHYRTETGKLIRDITKFNVLITTFEMIVTD---YQDLKNFTWRACVIDEAHRL- 1996 Query: 287 WSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ 346 ++ + + + QL ++ +LL+ TP Q + F+ L L+P++F +F+ E Sbjct: 1997 --KNRNCKLLEGLRQL--NLEHRVLLSGTPLQNNVNELFSLLNFLEPSQFACSEEFLREF 2052 Query: 347 KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSM 406 + + ++ + + +L+ D E + + ++E + Sbjct: 2053 GSLKTESEVLK-------------------LQALLKPMMLRRLKDDVEKSLAPKEETIVE 2093 Query: 407 LMDRHGTSRVLFRNTRNGVKGFPKRE--------LHTIKLPLPTQYQTAIKVSGIMGARK 458 ++ + +R F + L + L ++G + Sbjct: 2094 -VELTNIQKKYYRGILEQNFSFLMKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEDQIQ 2152 Query: 459 SAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATA 516 Y ++ ++ E ++ + L R +VL+ Sbjct: 2153 YD--------YRQQHGEDAESYYKNLIVSSGKMVLIDKLLPKLRANGHRVLIFSQMVRCL 2204 Query: 517 LQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFA 575 LE L ++ + R A +++ D+ LLC++ G G N A Sbjct: 2205 DILEDYLMYKK-YPFERIDGRIRGNLRQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTAA 2263 Query: 576 SHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHT 635 ++++D +NP Q R RIGQ ++I+ T + + L + Sbjct: 2264 DTVIIYDSDWNPQNDLQAQARCHRIGQQKMVKIYRLLCRNTYEREMFDKASLKLGLDKAV 2323 Query: 636 CPTG------RTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLL 689 + + I L D + E + R +++ Sbjct: 2324 LQSMNTGQNKDGTQRQLSKKEIEDLLKKGAYGAVMDD-DAGDKFCEEDIDSILLRRTQVI 2382 Query: 690 EIHSNGGE--KAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDD-RGDNMIVLTPSDHM 746 + S G + A S D + + F I+ D L ++ Sbjct: 2383 TMESEKGSTFSKASFAASANRSDINIDDPDFWNKWAKKAEIDPTACEKDETEDLVIAEPR 2442 Query: 747 LVPDFPGLSED 757 D Sbjct: 2443 RRTQIKRYGHD 2453 >UniRef50_Q4RLJ2 Chromosome undetermined SCAF15020, whole genome shotgun sequence. (Fragment) n=3 Tax=Tetraodontidae RepID=Q4RLJ2_TETNG Length = 3070 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 111/664 (16%), Positives = 213/664 (32%), Gaps = 70/664 (10%) Query: 107 VFSKPQDRLFAGQIDRMDRF--ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHD 164 + D + + + + LR+ R S + ++ +S L +QL + Sbjct: 226 ELQEDLDPEKIREFEEVQKLPADLRHVDRPPSEKWQKLDFSRDYRNGNELREYQLEGMNW 285 Query: 165 VGRRH--APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRR 222 + +LADE+GLGKTI++ L++ G LII P + W E Sbjct: 286 LLFNWYNRKNCILADEMGLGKTIQSITFLYEIFNMGIRGPFLIIAPLSTITNWEREFRTW 345 Query: 223 FNLRFALFDDERYAEAQHDAYNPFD------------TEQLVICSLDFARRSKQRLEHLC 270 ++ ++ + + Y F +I + + L Sbjct: 346 THMNVIVYHGSQISRQMILQYEMFYRDQQGNTIPSVLKFHGLITTFEMIMADCPE---LR 402 Query: 271 EAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRL 330 + W +V+DEAH L ++ + + ++ + ++ +LLT TP Q +E F+ L Sbjct: 403 KLHWRCVVIDEAHRL---KNKNCKLLEGLKLM--NLEHKVLLTGTPLQNSVEELFSLLNF 457 Query: 331 LDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAAN 390 L+P +F + F+EE + + + + +L+ Sbjct: 458 LEPLQFPSESTFLEEFGDLKTDEQV-------------------KKLQAILKPMMLRRLK 498 Query: 391 SDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRE--------LHTIKLPLPT 442 D E + ++E + ++ + +R F + L + L Sbjct: 499 DDVEKNLAPKEETIIE-VELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRK 557 Query: 443 QYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH- 501 ++G SAE++ + + ++ + L Sbjct: 558 CCNHPYLITG------SAEEKILESFRKSYSPDAADFQLQAMIQAAGKLVLIDKLLPKLL 611 Query: 502 -RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-V 559 KVLV LE L +R + +R A F + D+ Sbjct: 612 AGGHKVLVFSQMVRCLDILEDYLIQRR-YSYERIDGRVRGNQRQAAIDRFCKPDSDRFVF 670 Query: 560 LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS 619 LLC+ G G N A ++FD +NP Q R RIGQ+ ++++ + + Sbjct: 671 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYER 730 Query: 620 VLVRWYHEGLDAFEHTCPTGRTI-----YDSVYNDLINYLASPDQTEGFDDLIKNCREQH 674 + L + + + L D + Sbjct: 731 EMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSKLEVEDLLKKGAYGALMDEEDEGSKFC 790 Query: 675 EALKAQLEQGRDRLLEIHSNGGEKAQALAESIEE---QDDDTNLIAFAMNLFDIIGINQD 731 E Q+ Q R + + I + G A A I D + F I + D Sbjct: 791 EEDIDQILQRRTQTITIQTEGKGSTFAKASFISSGNRTDISLDDPNFWQKWAKIAEVEID 850 Query: 732 DRGD 735 + + Sbjct: 851 SKSE 854 >UniRef50_UPI00016E17D4 UPI00016E17D4 related cluster n=2 Tax=Tetraodontidae RepID=UPI00016E17D4 Length = 2367 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 113/677 (16%), Positives = 221/677 (32%), Gaps = 65/677 (9%) Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQR-----TSLIPHQLNIAHDVGRRH--A 170 G+++ + R K + + L R +L +QL + + Sbjct: 763 GKVEEFRKIQNRQPRLKRTPRPSPSSWKKLEESREYKNANTLREYQLEGVNWLLFNWYNR 822 Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 +LADE+GLGKTI++ +L + + L+I P + W E N+ ++ Sbjct: 823 QNCILADEMGLGKTIQSITLLSEIYAANIQGPFLVIAPLSTITNWEREFATWTNMNAIVY 882 Query: 231 DDERYAEAQHDAYNPF------------DTEQLVICSLDFARRSKQRLEHLCEAEWDLLV 278 + Y + +I + + L E W ++ Sbjct: 883 HGSLASRQMIQQYEMYCKDEKDHLIPGAYKFDALITTFEMILSDCPE---LREISWRCVI 939 Query: 279 VDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHD 338 +DEAH L ++ + +++ + + +LLT TP Q +E F+ L L+P +F Sbjct: 940 IDEAHRL---KNRNCKLLDSLKMMDQ--EHKVLLTGTPLQNTVEELFSLLHFLEPAQFPS 994 Query: 339 FAQFVEEQKNYR--PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDA 396 +F+ E + + + +L L + ++ + +Q+ + Sbjct: 995 EIEFLREFGDLKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQE--------TIIEVEL 1046 Query: 397 QSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGA 456 +++ +++R+ + L N+ + V L + L ++G Sbjct: 1047 TDIQKKYYRAILERNFSFLSLGANSNSNVP-----NLLNTMMELRKCCNHPYLINGAEEK 1101 Query: 457 RKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAA 514 + D L P+ Q ++ L L + KVL+ Sbjct: 1102 IVAELREVYDPLAPDFHLQA-------LIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVR 1154 Query: 515 TALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQ 573 LE L + + R A F++ D+ LLC+ G G N Sbjct: 1155 CLDILEDYLINKR-YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT 1213 Query: 574 FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFE 633 A V+FD +NP Q R RIGQ+ ++++ + + ++ L Sbjct: 1214 AADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDR 1273 Query: 634 HTCPTGRTI-------YDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRD 686 + I L D E Q+ Q R Sbjct: 1274 AVLQSMSGNKESNVNGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRA 1333 Query: 687 RLLEIHSNGGEKAQALAESIEEQDDDT---NLIAFAMNLFDIIGINQD--DRGDNMIVLT 741 + I S G + A + ++ + F I+ D +R + +++ T Sbjct: 1334 TTITIESEGKGSTFSKASFVASENRTDIALDDPEFWEKWAKKADIDVDSMNRKNTLVIDT 1393 Query: 742 PSDHMLVPDFPGLSEDG 758 P + L +G Sbjct: 1394 PRVRKQTRQYSSLRGEG 1410 >UniRef50_Q9HCK8 Chromodomain-helicase-DNA-binding protein 8 n=26 Tax=Tetrapoda RepID=CHD8_HUMAN Length = 2581 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 111/681 (16%), Positives = 213/681 (31%), Gaps = 77/681 (11%) Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGL-----RGQRTSLIPHQLNIAHDVGRRH--A 170 G+I R R+ K + + L R L +QL + + Sbjct: 770 GKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNR 829 Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 +LADE+GLGKTI++ L + G L+I P + W E + ++ Sbjct: 830 QNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVY 889 Query: 231 DDERYAEAQHDAYNPF------------DTEQLVICSLDFARRSKQRLEHLCEAEWDLLV 278 + Y + +I + + L E EW ++ Sbjct: 890 HGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPE---LREIEWRCVI 946 Query: 279 VDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHD 338 +DEAH L ++ + +++ + + +LLT TP Q +E F+ L L+P++F Sbjct: 947 IDEAHRL---KNRNCKLLDSLKHM--DLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPS 1001 Query: 339 FAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQS 398 ++F++ + + + +L+ D E + Sbjct: 1002 ESEFLKNFGDLKTEEQVQK-------------------LQAILKPMMLRRLKEDVEKNLA 1042 Query: 399 ARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRE--------LHTIKLPLPTQYQTAIKV 450 +QE + ++ + +R F + L + L + Sbjct: 1043 PKQETIIE-VELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLI 1101 Query: 451 SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLV 508 +G E++ + ++ + L + KVL+ Sbjct: 1102 NGA-------EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLI 1154 Query: 509 ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGS 567 LE L +R + R A F++ D+ LLC+ G Sbjct: 1155 FSQMVRCLDILEDYLIQRR-YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG 1213 Query: 568 EGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHE 627 G N A ++FD +NP Q R RIGQ+ ++++ + + + Sbjct: 1214 LGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASL 1273 Query: 628 GLDAFEHTCPTGR------TIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQL 681 L + + T I L + + E Q+ Sbjct: 1274 KLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEEDIDQI 1333 Query: 682 EQGRDRLLEIHSNGGEKAQALAESIEEQDDDT---NLIAFAMNLFDIIGINQD--DRGDN 736 R + I S G A A + ++ + F ++ D + +N Sbjct: 1334 LLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKADLDMDLLNSKNN 1393 Query: 737 MIVLTPSDHMLVPDFPGLSED 757 +++ TP F L +D Sbjct: 1394 LVIDTPRVRKQTRHFSTLKDD 1414 >UniRef50_Q3L8U1 Chromodomain-helicase-DNA-binding protein 9 n=47 Tax=Deuterostomia RepID=CHD9_HUMAN Length = 2897 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 125/768 (16%), Positives = 239/768 (31%), Gaps = 87/768 (11%) Query: 80 LLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQ 139 ++ Y+ + E+ D L + ++L A + D R R S+ Sbjct: 793 VIYYLVKWCSLPYED-STWELKEDVDLAKIEEFEQLQASRPD------TRRLDRPPSNIW 845 Query: 140 FRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLS 197 ++ S L +QL + + +LADE+GLGKTI++ L++ LL+ Sbjct: 846 KKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLT 905 Query: 198 GAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF----------- 246 G LII P + W E ++ ++ + Y + Sbjct: 906 GIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRG 965 Query: 247 -DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEH 305 Q +I + + L EW +++DEAH L ++ + + ++ + + Sbjct: 966 AYRFQAIITTFEMIL---GGCGELNAIEWRCVIIDEAHRL---KNKNCKLLEGLKLM--N 1017 Query: 306 VPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKL 365 + +LLT TP Q +E F+ L L+P RF + F++E + + Sbjct: 1018 LEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQK-------- 1069 Query: 366 SNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGV 425 + +L+ D E + ++E + ++ + +R Sbjct: 1070 -----------LQAILKPMMLRRLKEDVEKKLAPKEETIIE-VELTNIQKKYYRAILEKN 1117 Query: 426 KGFPKRE--------LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEF 477 F + L + L + G + + Q Sbjct: 1118 FSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAM 1177 Query: 478 EGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFH 535 ++ + L + KVL+ LE L + Sbjct: 1178 -------IQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLI-HKRYLYERID 1229 Query: 536 EGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRI 594 + R A F++ D+ LLC+ G G N A ++FD +NP Q Sbjct: 1230 GRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQ 1289 Query: 595 GRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI------YDSVYN 648 R RIGQ ++++ + + + L + + + Sbjct: 1290 ARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSK 1349 Query: 649 DLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEE 708 I L + + E Q+ R + + I S G A A + Sbjct: 1350 KEIEDLLRRGAYGAIMEEEDEGSKFCEEDIDQILLRRTKTITIESEGRGSTFAKASFVAS 1409 Query: 709 ---QDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDR 765 D + F I+ + + LV D P + + + + Sbjct: 1410 GNRTDISLDDPNFWQKWAKKAEIDIEAIS--------GRNSLVIDTPRIRKQTRPFSATK 1461 Query: 766 EVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGT 813 + +A+ E P +R D S G + ++ L G Sbjct: 1462 DELAELSEAESEGDEKPKLRRPCDR--SNGYGRTECFRVEKNLLVYGW 1507 >UniRef50_A8Q392 Associated with TFs and helicases family protein n=1 Tax=Brugia malayi RepID=A8Q392_BRUMA Length = 2707 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 115/713 (16%), Positives = 224/713 (31%), Gaps = 71/713 (9%) Query: 70 QVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRM-DRFAL 128 +V + E G + V +V + P+D++ A ++ D + Sbjct: 976 RVLDANELEGEDFVLIKWKSLPYEEVTWEKVEIV-------PEDKIEAYKLRNTCDSLKM 1028 Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIE 186 + + +S+ ++P L +Q + + + +LADE+GLGKT++ Sbjct: 1029 KPKLHPSASDWSKIPEDITFKGNNRLREYQFEGVNWLLYCYYNKQNCILADEMGLGKTVQ 1088 Query: 187 AGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF 246 L + G LI+VP + H W E ++ ++ + + Sbjct: 1089 TICFLQRVYDYGIHGPFLIVVPLSTIHNWQREFETWTDMNTIVYHGSAASRQIIQQTEFY 1148 Query: 247 D-------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPS 293 +I + + + L + + + ++DEAH L ++ Sbjct: 1149 YRPEELKGGKRNVVKFDALITTFEMVVSD---CDVLKQINYQVCIIDEAHRL---KNRNC 1202 Query: 294 REYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVA 353 + + L+ +LLT TP Q +E ++ L L+P +FH + F+E+ + Sbjct: 1203 KLLTS-GLLSLTAEHRVLLTGTPLQNNIEELYSLLNFLEPEQFHSSSAFLEQFGQCQTED 1261 Query: 354 DAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGT 413 + + +L+ D E ++E + + T Sbjct: 1262 QVQR-------------------LQDILKPMMLRRLKEDVEKTLQPKEETIIEI-QLSNT 1301 Query: 414 SRVLFRNTRNGV-----KGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDML 468 + +R KG L + L +SG + Sbjct: 1302 QKKYYRAILERNFSHLCKGTSVPSLMNAMMELRKCCNHPFLISGAEEQILAEVKAGHPDW 1361 Query: 469 YPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLRER 526 + IYQ ++ + L R KVL+ +E+ L Sbjct: 1362 SEDDIYQHA------LVQSSGKLVLIAKLLPKLRTDGHKVLIFSQMVRVLDIIEEFLVA- 1414 Query: 527 EGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPF 585 + + R A F+++D+ LLC+ G G N A +++FD + Sbjct: 1415 QNYTFERIDGNVRGDLRQSAIDRFSKKDSDRFIFLLCTRAGGLGINLTAADTVIIFDSDW 1474 Query: 586 NPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYD- 644 NP Q R RIGQ ++++ T + + L + + D Sbjct: 1475 NPQNDLQAQARCHRIGQTKMVKVYRLITCNTYEREMFDKASLKLGLDRAVLQSTTALKDT 1534 Query: 645 --SVYNDLINYLASPDQTEGFDDLIKNCREQHEALKA--QLEQGRDRLLEIHSNGGEKAQ 700 + I L + + +E L + LE G A+ Sbjct: 1535 SQQLSRKEIEELLKKGAYGAIMEENAEESKFNEEDIETILLRRTTTITLEAGVKGSTFAK 1594 Query: 701 ALAE-SIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFP 752 A S +D D + F I+ D + ++ F Sbjct: 1595 ASFNSSTNREDIDIDDPNFWSKWAKKANIDTDMSQADKQLIVLEPRNRKKRFE 1647 >UniRef50_UPI00006A0EF1 Chromodomain-helicase-DNA-binding protein 8 (EC 3.6.1.-) (ATP- dependent helicase CHD8) (CHD-8) (Helicase with SNF2 domain 1). n=3 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A0EF1 Length = 2021 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 110/653 (16%), Positives = 208/653 (31%), Gaps = 64/653 (9%) Query: 113 DRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQR-----TSLIPHQLNIAHDVGR 167 + + G+I+ R R K + + L R L +QL + + Sbjct: 483 EDVDDGKIEEFKRIEARQPNLKRVARPAATSWKKLELSREYQNGNQLREYQLEGVNWLLF 542 Query: 168 RH--APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNL 225 +LADE+GLGKTI++ L + G L+I P + W E + Sbjct: 543 NWYNRQNCILADEMGLGKTIQSITFLQEVYNVGIRGPFLVIAPLSTITNWEREFGSWTQM 602 Query: 226 RFALFDDERYAEAQHDAYNPF------------DTEQLVICSLDFARRSKQRLEHLCEAE 273 ++ + Y + +I + + L E E Sbjct: 603 NTIVYHGSLASRQMIQQYEMYCKDSKGRLIPGAYKFDALITTFEMVLSDCPE---LREIE 659 Query: 274 WDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDP 333 W +++DEAH L ++ + +++ + + +LLT TP Q +E F+ L L+P Sbjct: 660 WRCVIIDEAHRL---KNRNCKLLDSLKHM--DLEHKVLLTGTPLQNTVEELFSLLHFLEP 714 Query: 334 NRFHDFAQFVEEQKNYR--PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANS 391 +F A+F+++ + + + +L L + ++ + +Q+ ++ N Sbjct: 715 TQFSSEAEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNI 774 Query: 392 DSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVS 451 + ++ ++ S L S L + L ++ Sbjct: 775 QKKYYRAILEKNFSFLTKGASQSNT--------------PNLLNTMMELRKCCNHPYLIT 820 Query: 452 GIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVI 509 G S A ++ P+ Q ++ + L R KVL+ Sbjct: 821 GAEEKIISEFREATPVVPPDFHVQAM-------VRSSGKLVLIDKLLPKLRAGGHKVLIF 873 Query: 510 CAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSE 568 LE L +R + R A F+ D+ LLC+ G Sbjct: 874 SQMVRCLDILEDYLIQRR-YLYERIDGRVRGNMRQAAIDRFSRPDSDRFVFLLCTRAGGL 932 Query: 569 GRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEG 628 G N A ++FD +NP Q R RIGQ+ ++I+ + + + Sbjct: 933 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLK 992 Query: 629 LDAFEHTCPTGRTI-------YDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQL 681 L + + I L D + E Q+ Sbjct: 993 LGLDKAVLQSMSGRDNHLSGPIQQFTKKEIEDLLRKGAYAAIMDEDDEGSKFCEEDIDQI 1052 Query: 682 EQGRDRLLEIHSNGGEKAQALAESIEEQDDDT---NLIAFAMNLFDIIGINQD 731 R + I S G + A + ++ + F ++ D Sbjct: 1053 LLRRTTTITIESEGKGSTFSKASFVASENRTDISLDDPNFWQKWAKKADLDLD 1105 >UniRef50_B0R0I6 Chromodomain-helicase-DNA-binding protein 8 n=1 Tax=Danio rerio RepID=CHD8_DANRE Length = 2511 Score = 561 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 110/652 (16%), Positives = 200/652 (30%), Gaps = 74/652 (11%) Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGL-----RGQRTSLIPHQLNIAHDVGRRH--A 170 G+++ + R K + + L L +QL + + Sbjct: 806 GKVEEFRKIESRQPRLKRTPRPAASAWKKLDESTEYKNGNQLREYQLEGVNWLLFNWYNR 865 Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 +LADE+GLGKTI++ +L + +G +II P + W E ++ ++ Sbjct: 866 QNCILADEMGLGKTIQSIALLSEMFSAGVQSPFMIIAPLSTITNWEREFSNWTDMNAIVY 925 Query: 231 DDERYAEAQHDAYNPF------------DTEQLVICSLDFARRSKQRLEHLCEAEWDLLV 278 + Y + +I + + L E W +V Sbjct: 926 HGSLASRQMIQQYEMYCKDDKGHLIPGAYKFDALITTFEMILSDCPE---LREISWRCVV 982 Query: 279 VDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHD 338 +DEAH L ++ + +++ L + +LLT TP Q +E F+ L L+P +F Sbjct: 983 IDEAHRL---KNRNCKLLDSLKML--EIEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPS 1037 Query: 339 FAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQS 398 +F+ E + + + +L+ D E + Sbjct: 1038 EIEFLREFGDLKTEEQVQK-------------------LQSILKPMMLRRLKEDVEKNLA 1078 Query: 399 ARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRE---------LHTIKLPLPTQYQTAIK 449 +QE + ++ + +R F L + L Sbjct: 1079 PKQETIIE-VELTDVQKKYYRAILERNFSFLSMGATQNSNVPNLLNTMMELRKCCNHPYL 1137 Query: 450 VSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVL 507 ++G S D L P+ Q ++ L L + KVL Sbjct: 1138 ITGAEEKIVSELREVYDPLAPDFHLQA-------LVRSAGKLVLLDKLLPRLKAGGHKVL 1190 Query: 508 VICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIG 566 + LE L + + R A F++ D+ LLC+ G Sbjct: 1191 IFSQMVRCLDILEDYLI-HKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAG 1249 Query: 567 SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYH 626 G N A V+FD +NP Q R RIGQ+ ++++ + + ++ Sbjct: 1250 GLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKAS 1309 Query: 627 EGLDAFEHTCPTG----RTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE 682 L + + I L D E Q+ Sbjct: 1310 LKLGLDRAVLQSMSGNKESSIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQIL 1369 Query: 683 QGRDRLLEIHSNGGEKAQALAESIEEQDDDT---NLIAFAMNLFDIIGINQD 731 Q R + I S G + A + ++ + F I+ D Sbjct: 1370 QRRATTITIESEGKGSTFSKASFVASENRTDIALDDPEFWQKWAKKADIDMD 1421 >UniRef50_A7RMN4 Predicted protein (Fragment) n=14 Tax=Eumetazoa RepID=A7RMN4_NEMVE Length = 1360 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 106/673 (15%), Positives = 214/673 (31%), Gaps = 75/673 (11%) Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADE 178 + ++R R Y E ++ S + +L +QL + + +LADE Sbjct: 196 EPPPLPQRQFRPRPYPHEWHKLETSPVYKDENTLREYQLEGVNWLMFCWCNRQNSILADE 255 Query: 179 VGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEA 238 +GLGKTI++ L + G L+I P + W E ++ ++ + Sbjct: 256 MGLGKTIQSIAFLFEMQRYGIRGPNLVIAPLSTISNWQREFESWNDINAVVYHGSASSRH 315 Query: 239 QHDAYNPFD------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLV 286 Y + Q++I + + L W +++DEAH L Sbjct: 316 LIQEYEFYYRDEHGQPIPNIFKFQVLITTYEIIIADNM---QLSTVPWRAVIIDEAHRL- 371 Query: 287 WSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ 346 ++ + + + L + +LLT TP Q +E F+ L L+P++F F+ E Sbjct: 372 --KNRNCKLLEGLNNL--QMEHRILLTGTPLQNNVEELFSLLNFLEPSQFPSQGAFLMEF 427 Query: 347 KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSM 406 + + + + + + +L+ D E + ++E + Sbjct: 428 GDLKTESQV-------------------DKLKQLLKPMMLRRLKEDVEKNIAPKEETIIE 468 Query: 407 LMDRHGTSRVLFRNTRNGVKGFPKRE---------LHTIKLPLPTQYQTAIKVSGIMGAR 457 ++ + +R F + L + L ++G Sbjct: 469 -VELTTVQKKFYRAILERNFAFLAKGTSSTANVPNLMNTMMELRKCCNHPFLITGAEEKI 527 Query: 458 KSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAAT 515 R + ++ + L + KVLV Sbjct: 528 LQEYGREHVDRH-----------THAMIEASGKLVLIHKLLPKLKLGGHKVLVFSQMVRC 576 Query: 516 ALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQF 574 LE L + R A F++ D+ LLC+ G G N Sbjct: 577 LDILEDYLV-HMKYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA 635 Query: 575 ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEH 634 A +++FD +NP Q R RIGQ+ ++++ + + + L + Sbjct: 636 ADTVIIFDSDWNPQNDLQAQARCHRIGQSRSVKVYRLITRNSYEREMFDRASMKLGLDKA 695 Query: 635 TCPTGRTIY-----DSVYNDLINYLASPDQTEGF-DDLIKNCREQHEALKAQLEQGRDRL 688 + T + I L ++ + + E Q+ + R ++ Sbjct: 696 VLQSMNTKENAGNNGQMSKREIEDLLKRGAYGAIMEEDNDDASKFCEEDIDQILERRTQV 755 Query: 689 LEIHSNGGEKAQALAESIEEQD---DDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDH 745 +++ S G A A + + D + F ++ D + + + Sbjct: 756 IQVESEGKGSTFAKASFVSAKGDDDIDVDDPDFWEKWAKKADLDVDYLNNKDERILDAPR 815 Query: 746 MLVPDFPGLSEDG 758 +EDG Sbjct: 816 QRKQTRRYGNEDG 828 >UniRef50_UPI0001795D73 PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 9 (ATP-dependent helicase CHD9) (CHD-9) (Chromatin-related mesenchymal modulator) (CReMM) (Chromatin-remodeling factor CHROM1) (Peroxisomal proliferator-activated receptor A-interacting complex 3 n=1 Tax=Equus caballus RepID=UPI0001795D73 Length = 2818 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 114/695 (16%), Positives = 217/695 (31%), Gaps = 77/695 (11%) Query: 80 LLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQ 139 ++ Y+ + E+ D L + ++L A + D R+ R S+ Sbjct: 795 VIYYLVKWCSLPYED-STWELKEDVDLAKIEEFEQLQASRPD------TRHLDRPPSNIW 847 Query: 140 FRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLS 197 ++ S L +QL + + +LADE+GLGKTI++ L++ LL+ Sbjct: 848 KKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLT 907 Query: 198 GAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF----------- 246 G LII P + W E ++ ++ + Y + Sbjct: 908 GIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRG 967 Query: 247 -DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEH 305 Q +I + + L EW +++DEAH L ++ + + ++ + + Sbjct: 968 AYRFQAIITTFEMIL---GGCGELNAIEWRCVIIDEAHRL---KNKNCKLLEGLKLM--N 1019 Query: 306 VPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKL 365 + +LLT TP Q +E F+ L L+P RF + F++E + + Sbjct: 1020 LEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQK-------- 1071 Query: 366 SNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGV 425 + +L+ D E + ++E + ++ + +R Sbjct: 1072 -----------LQAILKPMMLRRLKEDVEKKLAPKEETIIE-VELTNIQKKYYRAILEKN 1119 Query: 426 KGFPKRE--------LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEF 477 F + L + L + G + + Q Sbjct: 1120 FSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAM 1179 Query: 478 EGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFH 535 ++ + L + KVL+ LE L + Sbjct: 1180 -------IQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLI-HKRYLYERID 1231 Query: 536 EGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRI 594 + R A F++ D+ LLC+ G G N A ++FD +NP Q Sbjct: 1232 GRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQ 1291 Query: 595 GRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI------YDSVYN 648 R RIGQ ++++ + + + L + + + Sbjct: 1292 ARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVGGIQQLSK 1351 Query: 649 DLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEE 708 I L + E Q+ R + + I S G A A + Sbjct: 1352 KEIEDLLRRGAYGAIMGEEDEGSKFCEEDIDQILLRRTKTITIESEGRGSTFAKASFVAS 1411 Query: 709 ---QDDDTNLIAFAMNLFDIIGINQDDRGDNMIVL 740 D + F I+ D + +L Sbjct: 1412 GNRTDISLDDPNFWQKWAKKAEIDIDAISGRVKIL 1446 >UniRef50_Q6C828 YALI0D23287p n=2 Tax=Yarrowia lipolytica RepID=Q6C828_YARLI Length = 1660 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 113/681 (16%), Positives = 222/681 (32%), Gaps = 43/681 (6%) Query: 110 KPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGR-- 167 PQ + D + A + + P + G L +Q+ + Sbjct: 648 GPQQDMDDEDPDNQKKADYYAVAHRIQEPVSKQPDMLVGG---QLKEYQIKGLQWMLSLF 704 Query: 168 RHAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRR-FNL 225 + +LADE+GLGKTI+ ++ + L+IVP + W +E + + Sbjct: 705 NNNLNGILADEMGLGKTIQTISLIAYLIETKKIPGPYLVIVPLSTLTNWTLEFEKWAPAI 764 Query: 226 RFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHL 285 + ++ A Q+++ + ++ + + L +W +++DE H + Sbjct: 765 KKLVYKGPPMARKAQQNAIRAGDFQVLLTTYEYIIKDRPV---LSRIKWVHMIIDEGHRM 821 Query: 286 VWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEE 345 ++A S+ + Q H L+LT TP Q + +A L + P F+ F E Sbjct: 822 ---KNAQSKLSSTLTQY-YHTRYRLILTGTPLQNSLPELWALLNFVLPKIFNSVKSFDEW 877 Query: 346 QKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVS 405 + LS +E ++ + + + LL+ D + E V Sbjct: 878 FNTPFASTGGQDKMD----LSEEETLLIIKRLHKVLRPFLLRRLKKDVAKDLPDKVEKVL 933 Query: 406 MLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQ-TAIKVSGIMGARKSAEDRA 464 L++ F + +++ I E+ Sbjct: 934 KC-KMSALQSKLYQQMIKHNVLFIGEGVQGATKTGLKGLNNQVMQLRKICNHPFVFEEV- 991 Query: 465 RDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQV 522 E + N W + E L L + ++L+ +E Sbjct: 992 ------EDLVNPNRLTNDNLWRTAGKFELLDRILPKFKAAGHRILMFFQMTQIMDIMEDF 1045 Query: 523 LREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMF 581 +R + G + G +R F D+ LL + G G N Q A ++++ Sbjct: 1046 MRLK-GWQYLRLDGGTKSEDRSGLLGKFNAPDSPYFAFLLSTRAGGLGLNLQTADTVIIY 1104 Query: 582 DLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT 641 D +NP Q R RIGQ +++I E + + ++ H+ LD G+ Sbjct: 1105 DTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEDSVEENILERAHKKLDIDGKVIQAGKF 1164 Query: 642 IYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQL---EQGRDRLLEIHSNGGEK 698 S + +L + E + E L L ++ R ++ + Sbjct: 1165 DNKSTAEEQEAFLRGLLEREEKQKEKGDDDVDDEELNEILARNDEERILFAQLDAERHAT 1224 Query: 699 AQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDG 758 +Q IE + L + + + + ++ GL+E+ Sbjct: 1225 SQYGKGKIERLFTEEELPEAYKRDIKLA---VEPINTDQFGRGARERKVLHYDDGLTEEQ 1281 Query: 759 IT------ITFDREVALARED 773 + D +A R D Sbjct: 1282 WLEAIDNDVDMDETIAKKRAD 1302 >UniRef50_UPI000175F9EE PREDICTED: similar to chromodomain helicase DNA binding protein 6 n=4 Tax=Euteleostomi RepID=UPI000175F9EE Length = 2699 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 115/695 (16%), Positives = 214/695 (30%), Gaps = 66/695 (9%) Query: 76 EENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRA--R 133 E + +L T V V S + ++ F + Sbjct: 162 EVDRVLEIAITTDTETGEEVTHYLVKWCSLSYEESTWELQEDVDPVKIKEFEELKKVPEM 221 Query: 134 KYSSEQFRMPYSGLRGQR-----TSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIE 186 K+ + L R L +QL + + +LADE+GLGKTI+ Sbjct: 222 KHVERPLPEQWQKLEKSRDYRNGNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQ 281 Query: 187 AGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF 246 + L++ L G LII P + W E + ++ + + Y + Sbjct: 282 SITFLYEIFLMGLRGPFLIIAPLSTITNWEREFRTWTEMNVIVYHGSQISRQMILQYEMY 341 Query: 247 D------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSR 294 Q VI + + L + W +V+DEAH L ++ + Sbjct: 342 HRDEQGNIMSGEFKFQGVITTFEMIMADCPE---LKKINWRCVVIDEAHRL---KNRNCK 395 Query: 295 EYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVAD 354 + ++ + ++ +LLT TP Q +E F+ L L+P++F F+EE + + Sbjct: 396 LLEGLKLM--NLEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETTFLEEFGDLKTEEQ 453 Query: 355 AVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTS 414 + + +L+ D E + ++E + ++ Sbjct: 454 V-------------------KKLQAILKPMMLRRLKDDVEKNLAPKEETIIE-VELTNIQ 493 Query: 415 RVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPER-- 472 + +R F + + + P T +++ +L R Sbjct: 494 KKYYRAILEKNFAFLAKGANQHNM--PNLINTMMELRKCCNHPYLITGAEEKILESFRKT 551 Query: 473 -IYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGI 529 + ++ + L KVLV LE L +R Sbjct: 552 YSSDAADFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQRR-Y 610 Query: 530 RAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPD 588 + R A F++ D+ LLC+ G G N A ++FD +NP Sbjct: 611 TYERIDGRVRGNLRQAAIDRFSKVDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 670 Query: 589 LLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI-----Y 643 Q R RIGQ+ ++++ + + + L + Sbjct: 671 NDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGV 730 Query: 644 DSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALA 703 + + L D + E Q+ Q R + + I S G A A Sbjct: 731 QQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKA 790 Query: 704 ESIEE---QDDDTNLIAFAMNLFDIIGINQDDRGD 735 + D + F I + D + + Sbjct: 791 SFVSSGNRTDISLDDPNFWQKWAKIAELEIDSKAE 825 >UniRef50_Q6FJN8 Strain CBS138 chromosome M complete sequence n=5 Tax=Dikarya RepID=Q6FJN8_CANGA Length = 1730 Score = 554 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 109/607 (17%), Positives = 201/607 (33%), Gaps = 40/607 (6%) Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIE 186 Y E+ R S L G +L +Q+ + + +LADE+GLGKTI+ Sbjct: 779 YYNVAHRIKEEVRQQPSILVGG--TLKEYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQ 836 Query: 187 AGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYN 244 +L LIIVP + W E + LR + A Sbjct: 837 TISLLTYLYEMKNIKGPFLIIVPLSTLPNWSSEFAKWAPKLRTISYKGSPNERKMKQAQI 896 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAE 304 VI + ++ + + L + +W +++DE H + ++A S+ + Sbjct: 897 KSGEFDAVITTFEYIIKERAI---LSKVKWVHMIIDEGHRM---KNAQSKLSLTLNTF-Y 949 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNK 364 H L+LT TP Q + +A L + P F+ F E + + Sbjct: 950 HSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSAKSFDEWFNTPFANTGGQDKI----E 1005 Query: 365 LSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG 424 LS +E ++ + + LL+ D E + E V +++ Sbjct: 1006 LSEEETLLIIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVIKC-KMSALQHAMYQQMLKH 1064 Query: 425 VKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATW 484 + F + + L +++ I E+ + N Sbjct: 1065 KQLFIGDQKKNKLVGLRGFNNQLMQLKKICNHPFVFEEVEDHINPTR-------DTNMNI 1117 Query: 485 WNFDPRVEWLMGYLTSHRS--QKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 W + E L L ++ +VL+ +E LR I+ E Sbjct: 1118 WRVAGKFELLERILPKLKASRHRVLIFFQMTQIMDIMEDFLRY-IDIKYLRLDGHTRSDE 1176 Query: 543 RDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 R F + ++ +L + G G N Q A +++FD +NP Q R RIG Sbjct: 1177 RGELLKLFNDPNSEYFCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIG 1236 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 Q ++++I + + V++ ++ LD G+ S + L S + E Sbjct: 1237 QKNEVRIIRLITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTAEEQEALLRSLLEAE 1296 Query: 662 GFDDLIKNCRE------QHEALKAQLEQGRDRLLEIHSNGGEKAQA-----LAESIEEQD 710 + + + L + D L E+ +A + + D Sbjct: 1297 EGRRRRREAGIEEEEELRDNEINEILARSEDDLALFSKLDTEREEADKAMHINSRLMTLD 1356 Query: 711 DDTNLIA 717 + + Sbjct: 1357 ELPEIYH 1363 >UniRef50_P22082 Transcription regulatory protein SNF2 n=7 Tax=cellular organisms RepID=SNF2_YEAST Length = 1703 Score = 554 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 111/642 (17%), Positives = 218/642 (33%), Gaps = 33/642 (5%) Query: 130 YRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEA 187 Y E + S L G +L +Q+ + + +LADE+GLGKTI+ Sbjct: 745 YNVAHRIKEDIKKQPSILVGG--TLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQT 802 Query: 188 GMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNP 245 +L L+IVP + W E + LR F A Sbjct: 803 ISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQAKIR 862 Query: 246 FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEH 305 +V+ + ++ + + L + +W +++DE H + ++A S+ + H Sbjct: 863 AGEFDVVLTTFEYIIKERAL---LSKVKWVHMIIDEGHRM---KNAQSKLSLTLNT-HYH 915 Query: 306 VPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKL 365 L+LT TP Q + +A L + P F+ F E + +L Sbjct: 916 ADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKI----EL 971 Query: 366 SNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGV 425 S +E ++ + + LL+ D E + E V +++++ Sbjct: 972 SEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKC-KMSALQQIMYQQMLKYR 1030 Query: 426 KGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWW 485 + F + + + L +++ I E+ + N W Sbjct: 1031 RLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRE-------TNDDIW 1083 Query: 486 NFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIER 543 + E L L + +VL+ +E LR I+ ER Sbjct: 1084 RVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRY-INIKYLRLDGHTKSDER 1142 Query: 544 DRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 F D+ +L + G G N Q A +++FD +NP Q R RIGQ Sbjct: 1143 SELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQ 1202 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEG 662 ++++I + + V++ ++ LD G+ S + L S E Sbjct: 1203 KNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLDAE- 1261 Query: 663 FDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNL 722 ++ K E + + + +L + + E +++++ + + + Sbjct: 1262 -EERRKKRESGVEEEEELKDSEINEILARNDEEMAVLTRMDEDRSKKEEELGVKSRLLEK 1320 Query: 723 FDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFD 764 ++ I D G + + + + T T++ Sbjct: 1321 SELPDIYSRDIGAELKREESESAAVYNG--RGARERKTATYN 1360 >UniRef50_O94421 SWI/SNF chromatin-remodeling complex subunit snf22 n=3 Tax=Schizosaccharomyces RepID=SNF22_SCHPO Length = 1680 Score = 554 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 114/653 (17%), Positives = 216/653 (33%), Gaps = 36/653 (5%) Query: 120 IDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHA--PRVLLAD 177 I D+ ++ E+ P + G +L +QL + + +LAD Sbjct: 838 ISEEDKNLDYFKVAHRIHEEVEQPKIFVGG---TLKDYQLKGLEWMLSLYNNNLNGILAD 894 Query: 178 EVGLGKTIEAGMILHQQLLS-GAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERY 235 E+GLGKTI+ + + LIIVP + W++E + +++ + Sbjct: 895 EMGLGKTIQTIAFITYLIEKKNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQ 954 Query: 236 AEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 + +++ + ++ + + L +W +++DE H + ++ S+ Sbjct: 955 LRKTLQSQIRSSNFNVLLTTFEYIIKDRPL---LSRIKWVHMIIDEGHRI---KNTQSKL 1008 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 + H L+LT TP Q + +A L + P F+ F E Sbjct: 1009 TSTLSTY-YHSQYRLILTGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGG 1067 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR 415 + L+ +E ++ + + + L + D E + E V G Sbjct: 1068 QDKIG----LNEEEALLIIKRLHKVLRPFLFRRLKKDVEKELPDKVEKVIKCP-LSGLQL 1122 Query: 416 VLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ 475 L++ + F E + T +++ I ED ER Sbjct: 1123 KLYQQMKKHGMLFVDGEKGKTGIKGLQ--NTVMQLKKICNHPFIFEDV-------ERAID 1173 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAAV 533 + W + E L L K L+ +E LR + + Sbjct: 1174 PSGTNVDLLWRAAGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSK-NWKYLR 1232 Query: 534 FHEGMSIIERDRAAAWFAEEDTG-AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQ 592 +R A F + + +L + G G N Q A +++FD +NP Q Sbjct: 1233 LDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQ 1292 Query: 593 RIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLIN 652 R RIGQ +++I EK+ + ++ LD G+ S + Sbjct: 1293 AQDRAHRIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREA 1352 Query: 653 YLASPDQTEGFDD-LIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDD 711 +L S + +G DD + Q + L + + + L+ E+A A I + Sbjct: 1353 FLRSLLEHDGDDDHDLTYGELQDDELNELISRTDEELVLFKKLDKERA---ATDIYGKGK 1409 Query: 712 DTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFD 764 + L D + D ++ S +T D Sbjct: 1410 PLERLLTVNELPDFYKVEVDSFAVQSSSELEDQYLERKRRRRNSISYTELTLD 1462 >UniRef50_UPI00016E800D UPI00016E800D related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E800D Length = 2164 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 118/715 (16%), Positives = 221/715 (30%), Gaps = 77/715 (10%) Query: 72 EEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYR 131 E+ ++ Y+ + E+ D L + ++L A + D R Sbjct: 182 EDKDTGEEVVYYLVKWCSLPYED-STWELKDDVDLNKIEEFEQLQAVKPDS------RRM 234 Query: 132 ARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGM 189 R ++ +M +S +L +QL + + +LADE+GLGKTI++ Sbjct: 235 ERPATNLWKKMEHSREYRNGNTLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSIT 294 Query: 190 ILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTE 249 L + G LII P + W E L ++ + Y + + Sbjct: 295 FLEEIYRMGIKGPFLIIAPLSTIANWEREFRTWTYLNAIVYHGSMVSRQMLQQYEMYFRD 354 Query: 250 ------------QLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQ 297 Q VI + + L EW +V+DEAH L ++ + + Sbjct: 355 SQGPCVAECLQIQAVITTFEMIL---GGCPELNAIEWRCVVIDEAHRL---KNKNCKLLE 408 Query: 298 AIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVA 357 + + ++ +LLT TP Q +E F+ L L+P RF F++E + + Sbjct: 409 GFKLM--NLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQK 466 Query: 358 MLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVL 417 + +L+ D E + ++E + ++ + Sbjct: 467 -------------------LQGILKPMMLRRLKEDVEKKLAPKEETIIE-VELTNIQKKY 506 Query: 418 FRNTRNGVKGFPKRE--------LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY 469 +R F + L + L + G E++ + Sbjct: 507 YRAILEKNFSFLAKGAGQANMPNLVNTMMELRKCCNHPYLIKGA-------EEKILEDFR 559 Query: 470 PERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLRERE 527 + ++ + L + KVL+ LE L +R Sbjct: 560 EVYNPAAVDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRR 619 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFN 586 + R A F++ D+ LLC+ G G N A ++FD +N Sbjct: 620 -YLYERIDGRVRGNLRQAAIDRFSKPDSERFVFLLCTRAGGLGINLTAADTCIIFDSDWN 678 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGR------ 640 P Q R RIGQ ++++ + + + L + + Sbjct: 679 PQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSL 738 Query: 641 TIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 + I L D + E Q+ Q R + + I S G Sbjct: 739 AAQQQLSKREIEDLLKRGAYGAIMDEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTF 798 Query: 701 ALAESIEE---QDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFP 752 A A + D + F I+ + ++ + + P Sbjct: 799 AKASFVASGNRTDISLDDPNFWDKWAKKADIDMEMVNGRNSLVIDTPRVRKQTRP 853 >UniRef50_C4R9B5 Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation n=2 Tax=Saccharomyceta RepID=C4R9B5_PICPG Length = 1649 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 126/677 (18%), Positives = 227/677 (33%), Gaps = 58/677 (8%) Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADE 178 D D Y E+ + L G L +Q+ + + +LADE Sbjct: 714 DNNDSSTDYYSIAHKIKEEITKQPTILVGG--VLKEYQVKGLQWMVSLFNNKLNGILADE 771 Query: 179 VGLGKTIEAGMILHQQLLS-GAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYA 236 +GLGKTI+ +L + L+IVP + W E + +L+ + Sbjct: 772 MGLGKTIQTISLLTYLVEKKNIPGPFLVIVPLSTLTNWNSEFDKWAPSLKKITYKGNPQF 831 Query: 237 EAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREY 296 A Q+++ + ++ + + L + +W +++DE H + ++A S+ Sbjct: 832 RKTVQADIRAKKFQVLLTTYEYIIKDRPL---LSKVKWVHMIIDEGHRM---KNANSKLS 885 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAV 356 + Q H L+LT TP Q + +A L + P F+ F E + Sbjct: 886 STLTQY-YHSDYRLILTGTPLQNSLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGSH 944 Query: 357 AMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRV 416 + LS +E ++ + + LL+ D E + E V Sbjct: 945 DKI----ALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPEKIEKVVKC-KSSALQIK 999 Query: 417 LFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQE 476 L+ + F + + + +++ I E+ E + Sbjct: 1000 LYEQMLKYNQLFVG-DESKKPIGVKGLNNKLMQLRKICNHPFVFEEV-------ENLINP 1051 Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVF 534 N W + E L L + +VL+ +E LR R+ ++ Sbjct: 1052 TRETNNNIWRVSGKFELLDRILPKFKATGHRVLIFFQMTQIMDIMEDFLRLRD-MKYLRL 1110 Query: 535 HEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQR 593 +R F E + LL + G G N Q A +++FD +NP Q Sbjct: 1111 DGATKSDDRQDMLRLFNAEGSDYFAFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQA 1170 Query: 594 IGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINY 653 R RIGQ ++++I E + + V++ +E LD GR S + Sbjct: 1171 QDRAHRIGQKNEVRILRLITEDSIEEVILSKAYEKLDIDGKVIQAGRFDNKSTAEEQEAI 1230 Query: 654 LASPDQTEGFDDLIKNCREQHE-----ALKAQLEQGRDRLLEIHSNGGEKAQAL------ 702 L + + + L A+ + + ++ + E+ + L Sbjct: 1231 LRQLLEAGESKKSDSEFDDDMDDDELNQLLARDDTELRKFQQLDKDRVEETKILPRLFTE 1290 Query: 703 AESIEEQDDDTNLIAFAMNLFDIIG--------INQDDRGDNMIVLTP---SDHMLVPDF 751 AE E D +L DI G ++ DD L S+ Sbjct: 1291 AELPEVYSQDPDLFMQKNEDIDIYGRGNRERKMMHYDDNMTEEQWLRQLEDSEDDNDGPE 1350 Query: 752 PGLS------EDGITIT 762 PG +DG+T T Sbjct: 1351 PGRKSKGKATDDGLTFT 1367 >UniRef50_Q6W8T1 Global transcription activator Snf2p n=2 Tax=Eukaryota RepID=Q6W8T1_PICAN Length = 1461 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 122/696 (17%), Positives = 228/696 (32%), Gaps = 49/696 (7%) Query: 81 LTYIGTRLDTEESGVALREVFLDSKLVFS---KPQDRLFAGQIDRMDRFALRYRARKYSS 137 L L T V +++ +V + PQ + D A Y Sbjct: 527 LKQTTGFLRTLIQSVKVQQRDTQEHMVHAHHIDPQYTNTEEEDDEEKENADYYSVAHRIQ 586 Query: 138 EQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQL 195 E+ S L G +L +QL + + +LADE+GLGKTI+ +L + Sbjct: 587 EKIEKQPSILVGG--TLKEYQLRGLEWMVSLFNNHLNGILADEMGLGKTIQTISLLTYIM 644 Query: 196 L-SGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVI 253 L+IVP + W +E + +L+ + + +++ Sbjct: 645 EVKKIPGPFLVIVPLSTLPNWNLEFDKWAPSLKKISYKGSPQMRKELAYDVRAGNFNVLL 704 Query: 254 CSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLT 313 + ++ + K L + +W +++DE H + ++ S+ + + H L+LT Sbjct: 705 TTYEYVIKDKYL---LSKIKWVHMIIDEGHRM---KNTKSKLSSTLTEF-YHSDYRLILT 757 Query: 314 ATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNML 373 TP Q + +A L + P F+ F + + L + + + L Sbjct: 758 GTPLQNNLPELWALLNFVLPKIFNSDKSFDDWFNTPFANTGSQDKLELSEEETLLVIRRL 817 Query: 374 GEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKREL 433 +++ LL+ D E + + E V + G L+ + F Sbjct: 818 HKVLR----PFLLRRLKKDVEKSLPNKIERVIKC-RKSGLQTKLYHQMLKYNQLFIGDSD 872 Query: 434 HTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEW 493 + + +++ I E + +N T W + E Sbjct: 873 SKAPVGIKGMNNKLMQLRKICNHPYVFPAI-------EDMINPSHENNDTIWRVSGKFEL 925 Query: 494 LMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA 551 L L R +VL+ +E LR R G+ +R F Sbjct: 926 LDRILPKFRASGHRVLMFFQMTQIMDIMEDFLRFR-GMHYMRLDGDTRADDRTALLKDFN 984 Query: 552 EEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610 ED+ LL + G G N Q A +++FD +NP Q R RIGQ ++++I Sbjct: 985 SEDSPYFVFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILR 1044 Query: 611 PYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNC 670 + + ++ H+ LD G+ S + L + E D Sbjct: 1045 LITSDSIEEYILERAHQKLDIDGKVIQAGKFDQKSTSEEQEALLRQLLEAEENDRDEDEV 1104 Query: 671 REQHEALKAQLEQGRDRLLEIHSNGGEK----------------AQALAESIEEQDDDTN 714 E + L L + + L + E+ + + E D+ Sbjct: 1105 LE-DKELNEILARNEEELQLFNKIDEERNDSSLGYPRLITESELPEIYNQEPETTDEVAE 1163 Query: 715 LIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPD 750 ++ + + + D+ L D D Sbjct: 1164 MLHYGRGARERKIAHYDENITEEQWLKEIDGYASDD 1199 >UniRef50_A2D9P9 F/Y-rich N-terminus family protein n=1 Tax=Trichomonas vaginalis RepID=A2D9P9_TRIVA Length = 1924 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 108/756 (14%), Positives = 227/756 (30%), Gaps = 57/756 (7%) Query: 66 GWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDR 125 ++ E++G+ Y+ + E ++ + S F Sbjct: 433 ETPEKIVGSHEKDGVTYYLTKWTKLD-YDQNTWET---AESLGSPELISQFEANNKIPPM 488 Query: 126 FALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGK 183 + E + ++ P+Q+ + + +LADE+GLGK Sbjct: 489 QDRFIPPKPSPEEYKPIEDFPQSKSGYTIRPYQIEGVCFLVKSWFNNQNAILADEMGLGK 548 Query: 184 TIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDA 242 T+++ L+ LII P + QW E+ ++ A + + Q Sbjct: 549 TLQSISFLYYLHRVQKVWGPFLIICPLSTIEQWEREIKEWTTMKVACYSGIKPRRDQMAE 608 Query: 243 YN------PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREY 296 Y P +++ + ++ + EW ++ +DEAH L ++ S+ Sbjct: 609 YELFFSETPIPKFHILLTTYEYIISDRNI---FNSIEWQVICIDEAHRL---KNTNSKLM 662 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAV 356 QA++ H LLLT TP Q + ++ L LD +F+D F + Sbjct: 663 QALKD--YHTQYKLLLTGTPLQNNITELWSLLNYLDEEKFNDIEAFQAQFGKLEEHEQ-- 718 Query: 357 AMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRV 416 + +L+ SD E +E++ ++ Sbjct: 719 -----------------ITELQGILKPLMLRRMKSDVEKGIKPLEEVIIEC-AMTQHQKL 760 Query: 417 LFRNTRNGVKGFPKRELH--------TIKLPLPTQYQTAIKVSGIMGARKSAEDRARDML 468 +++ + R H I + L ++G + Sbjct: 761 YYQSIYQKNTEYLTRGAHKNNSTNLNNIFMELRKVCNHPYLLNGAEEQILIERRDMSKIP 820 Query: 469 YPERIYQEFEGDNATWWNFDPRV--EWLMGYLTSHRSQKVLVICAKAATALQLEQVLRER 526 E + F ++ ++ + + +VL+ L+ L Sbjct: 821 ANEPLPDGFVEES--LIRSSGKMILLDKLLAKLKNDGHRVLIFSQMTRMLDILQDYL-YN 877 Query: 527 EGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPF 585 G + ER +A + + ++ LLC+ G G N A ++++D + Sbjct: 878 RGYEYERIDGTIRGDERQKAIDRYNKPNSPIFVFLLCTHAGGLGINLTSADTVIIYDSDW 937 Query: 586 NPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDS 645 NP Q R RIGQ +++++ + + + L G Sbjct: 938 NPQNDIQATARCHRIGQTKEVKVYRFITANSYERKMFDRASYKLGLDHAVL-EGTGKQQM 996 Query: 646 VYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAES 705 D+ L D + + E + ++ + G+ + Sbjct: 997 KTEDIEKLLRLGAYYAFEKDDKTDAEKFGEEDIDSIINRSTKIKHTNIGAGDGSTFSKAK 1056 Query: 706 IEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDR 765 E D++ ++ N + + + + G + F Sbjct: 1057 FEVDDENEDVDISDPNFWQKYLPVVVEDDIYDDMTIAERRRFKREVEGETGKIPAPEFPL 1116 Query: 766 EVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTI 801 R F W H + + ++ G I Sbjct: 1117 RPIEKRGTLDFY-WSHKKLDTLVINLMRFGWGRWRI 1151 >UniRef50_A5DUS7 SNF2-family ATP dependent chromatin remodeling factor snf21 n=1 Tax=Lodderomyces elongisporus RepID=A5DUS7_LODEL Length = 1926 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 117/670 (17%), Positives = 231/670 (34%), Gaps = 40/670 (5%) Query: 105 KLVFSKPQDRLFAGQIDRMDRFAL--RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIA 162 + + + +G ID ++ Y E+ S L G +L +QL Sbjct: 877 EERIEEQVPAMDSGVIDENEKREKTDYYNVAHRIKEEVNKQPSILVGG--TLKEYQLKGL 934 Query: 163 HDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEM 219 + + +LADE+GLGKTI+ ++ + L+IVP + W +E Sbjct: 935 QWMVSLFNNHLNGILADEMGLGKTIQTISLITYLIEVKKIPGPFLVIVPLSTVTNWNLEF 994 Query: 220 LRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLV 278 + +++ + Q+++ + ++ + K L +W ++ Sbjct: 995 EKWAPSVKKITYKGTPNQRKALQHEIRMGNFQILLTTFEYIIKDKAL---LGRIKWVHMI 1051 Query: 279 VDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHD 338 +DE H + ++A S+ + + + L+LT TP Q + +A L + P F+ Sbjct: 1052 IDEGHRM---KNANSKLSETLTT-NYYSDHRLILTGTPLQNNLPELWALLNFVLPKIFNS 1107 Query: 339 FAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQS 398 F E + +LS +E ++ + + LL+ D E Sbjct: 1108 VKSFDEWFNTPFANTGGQDKI----ELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLP 1163 Query: 399 ARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPT-QYQTAIKVSGIMGAR 457 ++ E V L++ + + +++ I Sbjct: 1164 SKIEKVVKC-KMSAVQSRLYQQMLKYNVLYSGDPQNPDVAKPIKNANNQIMQLKKICNHP 1222 Query: 458 KSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAAT 515 ED E +N W + E L L + KVL+ Sbjct: 1223 FVYEDV-------ENFINPTSENNDLIWRVAGKFELLDKVLPKFKQTGHKVLIFFQMTQI 1275 Query: 516 ALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQF 574 +E LR R ++ G +R F D+ LL + G G N Q Sbjct: 1276 MDIMEDFLRLR-NLKYMRLDGGTKADDRTELLKLFNAPDSEYFCFLLSTRAGGLGLNLQT 1334 Query: 575 ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEH 634 A +++FD +NP Q R RIGQ ++++I E + + +++ H L+ Sbjct: 1335 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITEDSVEEMILERAHAKLEIDGK 1394 Query: 635 TCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSN 694 G+ S + L + + E D+ + E + ++++ + Sbjct: 1395 VIQAGKFDNKSTAEEQEAMLRALLEKE--DERRQKGGEVEDEDLDD--DELNQIIARNEG 1450 Query: 695 GGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGL 754 E + L E N A + ++ GI + D + + + +L D+ Sbjct: 1451 ELETFKKLDEERYLTTKLANYPARLYSDLELPGIYKKDPEE----VLKKEDILTEDYGRG 1506 Query: 755 SEDGITITFD 764 + + T +D Sbjct: 1507 ARERKTTHYD 1516 >UniRef50_Q54UZ8 Myb domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q54UZ8_DICDI Length = 2373 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 101/606 (16%), Positives = 208/606 (34%), Gaps = 72/606 (11%) Query: 123 MDRFALRYRARKYSSEQFR-MPYSGLRGQRTSLIPHQLNIAHDVGRRHA--PRVLLADEV 179 + LR + R + + + L P+QL + + +L DE+ Sbjct: 477 PSKEELRDKPRPPRTAWKKIDQSPDYFTKGNKLRPYQLEGLNWLSFCWHEQRNSILGDEM 536 Query: 180 GLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEA 238 GLGKT+++ IL G L++ P T W E ++ ++ D Sbjct: 537 GLGKTVQSVSILETLRKVHGIRGPFLVVAPLTTIPHWKREFENWTDMNALVYHDSGAGRP 596 Query: 239 QHDAYNPF-------------------DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVV 279 Y + ++I + + A + HL W LV+ Sbjct: 597 ICRNYEFYLKDKDGGGGGASGGASGKITKFNVLITTYEMAITDRT---HLSRIPWKYLVI 653 Query: 280 DEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDF 339 DEAH L ++ + + + +LLLT TP Q + ++ L LDP +F + Sbjct: 654 DEAHRL---KNKSCKLTIELRSYS--FDHLLLLTGTPLQNNTQELWSLLNFLDPKQFSNL 708 Query: 340 AQFVEEQKNYRP--VADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQ 397 QF+ E + + +++ +L L + + + +++ ++ + + Sbjct: 709 DQFLLEYGDLKESSQVESLQAILKPYLLRRMKERVEKSIAPKEETIVEVELTTVQKKYYR 768 Query: 398 SARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGAR 457 + ++ S L R G K L I + L G+ + Sbjct: 769 AIYEKNFSFL--------------RKGGKSNQGPSLLNIMMELRKCCNHPYLTKGVEQSE 814 Query: 458 KSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAAT 515 S+ ++ + ++ + L + + KVL+ + Sbjct: 815 TSS-------------IKDKDQIFQKLIQASGKLVLIDKLLPKLKLGNHKVLIFSQMVSV 861 Query: 516 ALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQF 574 L+ L R G + +R A F++ D+ LLC+ G G N Sbjct: 862 LDILDDYLTYR-GYPHERIDGSIKGNDRQAAIDRFSKPDSDRFVFLLCTRAGGIGINLTA 920 Query: 575 ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEH 634 A +++FD +NP Q R RIGQ ++++ + T + ++ + L Sbjct: 921 ADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYRLVTKNTYERLMFDKASKKLGLDRA 980 Query: 635 TCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKN--------CREQHEALKAQLEQGRD 686 ++ DS + + ++ + I + ++ + + E+ D Sbjct: 981 VLTKMNSLADSNNGNNSSSSSTTKDELPDKETINSLLKFGVYAIKDDDTSSEKFYEEDID 1040 Query: 687 RLLEIH 692 ++L+ Sbjct: 1041 QILDRS 1046 >UniRef50_C4YJG3 SNF2-family ATP dependent chromatin remodeling factor snf21 n=11 Tax=Saccharomyceta RepID=C4YJG3_CANAL Length = 1680 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 120/681 (17%), Positives = 227/681 (33%), Gaps = 43/681 (6%) Query: 80 LLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI--DRMDRFALRYRARKYSS 137 LL LD+ V ++ L +S + + D Y Sbjct: 699 LLEQTNQFLDSLALAVQSQQKEAQDNLAYSGRAIEPASVEPLDDEKREKIDYYNVAHRIK 758 Query: 138 EQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQL 195 E+ S L G +L +QL + + +LADE+GLGKTI+ +L + Sbjct: 759 EEVTKQPSILVGG--TLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLV 816 Query: 196 L-SGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVI 253 L+IVP + W +E + +++ + QLV+ Sbjct: 817 EVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQHDIRTGNFQLVL 876 Query: 254 CSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLT 313 + ++ + K L +W +++DE H + ++A S+ + + Q H L+LT Sbjct: 877 TTFEYVIKDKGL---LGRIKWVHMIIDEGHRM---KNANSKLSETLTQ-NYHSDYRLILT 929 Query: 314 ATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNML 373 TP Q + +A L + P F+ F E + +L+ +E ++ Sbjct: 930 GTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKI----ELTEEETLLV 985 Query: 374 GEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKREL 433 + + LL+ D E + E V L++ + Sbjct: 986 IRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKC-KSSALQSKLYQQMLRYNMLYAGDPA 1044 Query: 434 H-TIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVE 492 + ++ + + +++ I E+ E + N W + E Sbjct: 1045 NGSVPVTIKNANNQIMQLKKICNHPFVYEEV-------ENLINPNIETNDQIWRVAGKFE 1097 Query: 493 WLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF 550 L L + KVL+ +E LR R G++ G +R F Sbjct: 1098 LLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFR-GMKYMRLDGGTKADDRTDLLKSF 1156 Query: 551 AEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 D+ LL + G G N Q A +++FD +NP Q R RIGQ ++++I Sbjct: 1157 NAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRIL 1216 Query: 610 VPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDD---- 665 E + + +++ H+ L+ G+ S + L + + E Sbjct: 1217 RLITENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQEAMLRALIEKEDERRQKGG 1276 Query: 666 -LIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAES--IEEQDDDTNLIAFA--- 719 + + L + + + L+ E+ A + + L Sbjct: 1277 TDEEEEDLDDDELNQIIARNENELVVFRKMDEERYLATKNAPYPSRLYTEEELPEIYKID 1336 Query: 720 -MNLFDIIGINQDDRGDNMIV 739 LF + ++ G Sbjct: 1337 PEELFKKEDVASEEYGRGARE 1357 >UniRef50_B9RSY8 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9RSY8_RICCO Length = 3502 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 112/678 (16%), Positives = 226/678 (33%), Gaps = 48/678 (7%) Query: 50 VTRVMFNPGDTITSHDGWQMQVEEV-KEENGLLTYIGTRLDTEESGVALREVFLDSKLVF 108 + ++ G D +V+++ KE L +G++L + E +D + Sbjct: 887 LLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLQDAKVMAKRFENDMDETRIA 946 Query: 109 SKPQDRLFAGQIDR--------MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN 160 + + A + M+ Y E + L G + L +Q+N Sbjct: 947 TTVEKNEAAFDNEDESDQAKHYMESNEKYYMMAHSVKESISEQPTCLHGGK--LREYQMN 1004 Query: 161 IAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLV 217 + + +LADE+GLGKT++ ++ + L++VP ++ W Sbjct: 1005 GLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWES 1064 Query: 218 EMLRR-FNLRFALFDDERYAEAQHDAYNPF-DTEQLVICSLDFARRSKQRLEHLCEAEWD 275 E+ ++ ++ + +++ + ++ +K L + W Sbjct: 1065 EINFWAPSIHKIVYSGPPEERRKLFKEKIVHQKFNVLLTTYEYLM-NKHDRPKLSKIHWH 1123 Query: 276 LLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNR 335 +++DE H + ++A + ++ LLLT TP Q +E +A L L PN Sbjct: 1124 YIIIDEGHRI---KNASCKLNAELKH--YQSAHRLLLTGTPLQNNLEELWALLNFLLPNI 1178 Query: 336 FHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSED 395 F+ F + +P LS +E ++ + + +L+ E+ Sbjct: 1179 FNSSEDFSQWFN--KPFESNADSSADEALLSEEENLLIINRLHQVLRPFVLRRLKHKVEN 1236 Query: 396 AQSARQELVSMLMDRHGTSRVLFRNTRN---GVKGFPKRELHTIKLPLPTQYQTAIKVSG 452 + E + + ++L + + R +H + L Sbjct: 1237 ELPEKIERLIRC-NASAYQKLLMKRVEENLGSIGNSKARSVHNSVMELRNICNHPYLSQL 1295 Query: 453 IMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVIC 510 + D L P+ ++E L L + +VL Sbjct: 1296 HVD--------EVDNLIPKHFLP-------PIIRLCGKLEMLDRILPKLKATDHRVLFFS 1340 Query: 511 AKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEG 569 +E+ L ++ R S ER F + ++ LL G G Sbjct: 1341 TMTRLLDVMEEYLTMKK-YRYLRLDGHTSGNERGALIEQFNKSNSPYFIFLLSIRAGGVG 1399 Query: 570 RNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGL 629 N Q A +++FD +NP + Q R RIGQ D+ + +T + + L Sbjct: 1400 VNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKL 1459 Query: 630 DAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQH-EALKAQLEQGRDRL 688 + G ++ D YL S + ++ + + A+ E D Sbjct: 1460 GVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEAAPVLDDDALNDILARSESEIDVF 1519 Query: 689 LEIHSNGGEKAQALAESI 706 + E +A S+ Sbjct: 1520 ESVDKQRREDERATWNSL 1537 >UniRef50_C5DF84 KLTH0D13046p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DF84_LACTC Length = 1540 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 113/643 (17%), Positives = 215/643 (33%), Gaps = 38/643 (5%) Query: 99 EVFLDSKLVFSKPQDRLFAGQIDRMDRFAL-RYRARKYSSEQFRMPYSGLRGQRTSLIPH 157 + + + + PQ D +R + Y E+ + S L G +L + Sbjct: 637 DSHMQKEEESATPQSPSAGDVSDEEERQNIDYYNVAHRIKEEIKQQPSILVGG--TLKEY 694 Query: 158 QLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQ 214 QL + + +LADE+GLGKTI+ +L L+IVP + Sbjct: 695 QLKGLQWMVSLYNNHLNGILADEMGLGKTIQTISLLTYLYEAKNVRGPSLVIVPLSTLTN 754 Query: 215 WLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAE 273 W E + +R + +V+ + ++ + + L + + Sbjct: 755 WDSEFDKWAPVIRKVAYKGSPNERKSKQGIIRSGQFDVVLTTFEYIIKERAL---LSKIK 811 Query: 274 WDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDP 333 W +++DE H + ++A S+ + H L+LT TP Q + +A L + P Sbjct: 812 WVHMIIDEGHRM---KNAQSKLSLTLNNY-YHTDYRLILTGTPLQNNLPELWALLNFVLP 867 Query: 334 NRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDS 393 F+ F E + +LS +E ++ + + LL+ D Sbjct: 868 KIFNSVKSFDEWFNTPFANTGGQDKI----ELSEEETLLVIRRLHKVLRPFLLRRLKKDV 923 Query: 394 EDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGI 453 E + E V + L+ + F + + +++ I Sbjct: 924 EKELPDKVEKVLKC-KMSALQQKLYEQMLKHRRLFIGDINSNKMVGMRGFNNQIMQLKKI 982 Query: 454 MGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICA 511 ED + NA W + E L L + ++L+ Sbjct: 983 CNHPFVFEDVEDQINPTRE-------TNANIWRVAGKFELLERILPKFKATGHRILIFFQ 1035 Query: 512 KAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGR 570 +E LR G++ +R F + ++ LL + G G Sbjct: 1036 MTQIMDIMEDFLRL-SGMKYLRLDGHTKSDDRTLLLNLFNDPNSEYFCFLLSTRAGGLGL 1094 Query: 571 NFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLD 630 N Q A +++FD +NP Q R RIGQ ++++I E + + V++ H+ LD Sbjct: 1095 NLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENSVEEVILDRAHKKLD 1154 Query: 631 AFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDD------LIKNCREQHEALKAQLEQG 684 G+ S + L S + E + + + L L + Sbjct: 1155 IDGKVIQAGKFDNKSTSEEQEALLRSLLEAEEEQKKKRALGMEEEEQMDDNELNETLARS 1214 Query: 685 RDRLLEIHSNGGEKAQALAES--IEEQDDDTNLIAFAMNLFDI 725 + L E+++ E+ + + L F + Sbjct: 1215 EEELKIFAQIDEERSRTHLENGITTSLMESSELPNFYHQDIEA 1257 >UniRef50_Q54Q16 Chromo domain-containing protein n=2 Tax=Eukaryota RepID=Q54Q16_DICDI Length = 1917 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 96/634 (15%), Positives = 206/634 (32%), Gaps = 61/634 (9%) Query: 150 QRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQL-LSGAAERVLII 206 +L +Q+ + + V+LADE+GLGKTI+ L L++ Sbjct: 751 SAGTLRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSYLFNEQDIKGPFLVV 810 Query: 207 VPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDT---------EQLVICSL 256 VP + W E + + ++ + Y + T +++ + Sbjct: 811 VPLSTIENWQREFAKWAPAMNVIVYTGTGQSRDIIRLYEFYTTNRLGKKKLNFNVLLTTY 870 Query: 257 DFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATP 316 DF + K L +W+ L VDEAH L +++ S ++ ++ + LL+T TP Sbjct: 871 DFILKDKN---TLGTIKWEFLAVDEAHRL---KNSESVLHEVLKL--YNTTNRLLVTGTP 922 Query: 317 EQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEM 376 Q ++ + L L PN+F F ++ + + Sbjct: 923 LQNSLKELWNLLNFLMPNKFTSLKDFQDQYSDLKENDQIAQ------------------- 963 Query: 377 IGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTI 436 + LL+ D E + + E + +D + ++ +EL+ Sbjct: 964 LHSVLKPHLLRRIKKDVEKSLPPKTERILR-VDLSNVQKKYYKWILTKNF----QELNKG 1018 Query: 437 KLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMG 496 K T ++ ++ + + + ++ L Sbjct: 1019 KGEKTTLLNIMTELKKTCNHPYLYQNARDECEL------GAKDLLDSMIRASGKLVLLDK 1072 Query: 497 YLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEED 554 L + +VL+ L L+ R + MS +R +A F D Sbjct: 1073 LLIRLKETGHRVLIFSQMVRMLDILADYLKGRS-FQFQRLDGSMSREKRSQAMDRFNAVD 1131 Query: 555 TGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYL 613 + LL ++ G G N A +++FD +NP Q R RIGQ + + I+ Sbjct: 1132 SPDFCFLLSTKAGGLGINLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNHVNIYRLVS 1191 Query: 614 EKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQ 673 + + + ++ + + T + N + ++L + Sbjct: 1192 KSSVEEDILERAKQKMVLDHLVIQTMEKSQTAKSN-----TPNNSNVFNKEELEAILKFG 1246 Query: 674 HEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDR 733 E L + + + + E+ + E+ + L+ + + +++++ Sbjct: 1247 AEELFKETGEEANPIEEMDIDEILSRAETREASDSTTAGEELLNSF-RVANFSTTSKEEQ 1305 Query: 734 GDNMIVLTPSDHMLVPDFPGLSEDGITITFDREV 767 + D + + + R Sbjct: 1306 QNATWEDIIPDADRQKAVQEEKDQLLLLGPRRRT 1339 >UniRef50_Q0CA85 SNF2-family ATP dependent chromatin remodeling factor snf21 n=13 Tax=Leotiomyceta RepID=Q0CA85_ASPTN Length = 1418 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 114/637 (17%), Positives = 208/637 (32%), Gaps = 43/637 (6%) Query: 72 EEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYR 131 V+E+ L E E + S ++ ++D Y Sbjct: 474 ASVREQQRSLA-----ERYGEEDQFYEEDEDEDIASGSDDEEGGGRRKVD-------YYA 521 Query: 132 ARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGM 189 E+ S L G +L +Q+ + + +LADE+GLGKTI+ Sbjct: 522 VAHRIKEEITEQPSILVGG--TLKEYQIRGLQWMISLYNNNLNGILADEMGLGKTIQTIS 579 Query: 190 ILHQQLLSGAA-ERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFD 247 ++ + L+IVP + W +E + + ++ A Q + Sbjct: 580 LITYIIEKKKNNGPFLVIVPLSTLTNWNLEFEKWAPAVSRVVYKGPPNARKQQQQQIRWG 639 Query: 248 TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVP 307 Q+++ + ++ + + L + +W ++VDE H + ++ S+ + Q Sbjct: 640 NFQVLLTTYEYIIKDRPV---LSKVKWTHMIVDEGHRM---KNTQSKLSSTLSQY-YTSR 692 Query: 308 GVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSN 367 L+LT TP Q + +A L + PN F F E + +LS Sbjct: 693 YRLILTGTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRM----ELSE 748 Query: 368 DELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKG 427 +E ++ + + LL+ D E +QE V L+R K Sbjct: 749 EEQLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKQERVIKC-RFSALQAKLYRQLMTHNKM 807 Query: 428 FPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNF 487 K + +++ + E M N W Sbjct: 808 VVSDG-KGGKTGMRGLSNMLMQLRKLCNHPFVFEPVEDQMNPTR-------ATNDLLWRT 859 Query: 488 DPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDR 545 + E L L R +VL+ +E LR R G++ +R Sbjct: 860 AGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLR-GLKYLRLDGSTKSDDRSD 918 Query: 546 AAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 F + LL + G G N Q A +++FD +NP Q R RIGQ + Sbjct: 919 LLKLFNAPGSEYFCFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKN 978 Query: 605 DIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQ-TEGF 663 +++I + + ++ LD G+ S + L + + E Sbjct: 979 EVRILRLITSNSIEEKILERAQFKLDMDGKVIQAGKFDNKSTNEERDALLRTLLESAEAA 1038 Query: 664 DDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 D L + L + + + L ++ Q Sbjct: 1039 DQLGDQDEMDDDDLNDIMARSDEELATFQRIDKDRQQ 1075 >UniRef50_C4Y7P0 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y7P0_CLAL4 Length = 1269 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 120/690 (17%), Positives = 240/690 (34%), Gaps = 41/690 (5%) Query: 80 LLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQ 139 LL + LD+ V L++ + +P D +D + Y+ E+ Sbjct: 432 LLKQTNSFLDSLAKAVKLQQAE-ADDIGVEEPTD-----NVDELREKIDYYQVAHRIKEE 485 Query: 140 FRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLS 197 + S L G L +Q+ + + +LADE+GLGKTI++ ++ + Sbjct: 486 VKEQPSILVGG--QLKEYQIKGLQWMVSLYNNKLNGILADEMGLGKTIQSISLITYLIEK 543 Query: 198 GAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSL 256 ++ L+IVP + W VE + +++ ++ + Q+++ + Sbjct: 544 KHEDKFLVIVPLSTITNWTVEFEKWAPSVKVIVYKGSPQQRKELQFEIRTGNFQVMLTTY 603 Query: 257 DFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATP 316 ++ R + L + +++DE H + ++A S+ ++Q L+LT TP Sbjct: 604 EYIIRERPI---LARFSYSHMIIDEGHRM---KNAQSKLSITLKQY-YRTKNRLILTGTP 656 Query: 317 EQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEM 376 Q + +A L + P F+ F E + +L+ +E ++ Sbjct: 657 LQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGTQEKI----ELTEEESLLVIRR 712 Query: 377 IGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELH-- 434 + + LL+ D E + E V + G +L++ F + Sbjct: 713 LHKVLRPFLLRRLKKDVEKDLPDKVEKVLKC-NLSGLQHILYQQMLKHNALFVGSQTTGT 771 Query: 435 TIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWL 494 K + +++ I E+ E I N W + E L Sbjct: 772 NNKSGIKGLNNKIMQLRKICNHPFVFEEV-------EDILNSSRITNELIWRTSGKFELL 824 Query: 495 MGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAE 552 L + KVL+ + E LR R+ + +R F + Sbjct: 825 DRILPKFKASGHKVLIFFQMTSVMNIFEDFLRLRD-MNYLRLDGSTKAEDRQDMLKSFNK 883 Query: 553 EDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVP 611 ++ LL + G G N Q A +++FD +NP Q R RIGQ ++++I Sbjct: 884 PESDIFCFLLSTRAGGLGLNLQSADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRL 943 Query: 612 YLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCR 671 + + V++ H+ LD G+ S + +L E ++ + Sbjct: 944 ITNDSVEEVILERAHQKLDIDGKVIQAGKFDNKSTAEEQEEFLKKLLDAEQGENFNEEND 1003 Query: 672 E-QHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQ 730 + L L + D ++ + + T L+ ++ + Sbjct: 1004 SLDDDELNDILARSEDEKKMFTEMDTQRIIQEKQQSRQGGYSTRLMTKE----ELPEVFT 1059 Query: 731 DDRGDNMIVLTPSDHMLVPDFPGLSEDGIT 760 +D + T + +DG+T Sbjct: 1060 EDISHHFEKDTKELSRMREKKRVKYDDGLT 1089 >UniRef50_D1ZML7 Putative STH1 protein n=1 Tax=Sordaria macrospora RepID=D1ZML7_SORMA Length = 1486 Score = 537 bits (1385), Expect = e-151, Method: Composition-based stats. Identities = 114/642 (17%), Positives = 218/642 (33%), Gaps = 52/642 (8%) Query: 75 KEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARK 134 ++ +G L + + + ++ A R + P++ + + +R Y Sbjct: 467 RQTDGFLHQLASSVRAQQREAAERYGDDVQGI----PEEESDVDEDEESNRKIDYYAVAH 522 Query: 135 YSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIEAGMILH 192 E+ S L G L +Q+ + + +LADE+GLGKTI+ ++ Sbjct: 523 RIKEEVTEQASILVGG--QLKEYQIKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVT 580 Query: 193 QQLLSGA-AERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQ 250 + L+IVP + W +E + ++ ++ H Q Sbjct: 581 YLIERKQQNGPYLVIVPLSTLTNWNLEFDKWAPSVSKIVYKGPPNTRKLHQDRIRRGDFQ 640 Query: 251 LVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVL 310 +++ + ++ + + L + +W +++DE H + ++A S+ I+Q L Sbjct: 641 VLLTTYEYIIKDRPL---LSKIKWFHMIIDEGHRM---KNANSKLSATIQQF-YSTRFRL 693 Query: 311 LLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDEL 370 +LT TP Q + ++ L + PN F F E + +L+ +E Sbjct: 694 ILTGTPLQNNLAELWSMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKM----ELTEEEQ 749 Query: 371 NMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPK 430 ++ + + LL+ D E + E V + L++ K Sbjct: 750 ILVIRRLHKVLRPFLLRRLKKDVEKDLPDKTEKVIKC-KFSALQQRLYKQMVTHQKILVS 808 Query: 431 ---------RELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDN 481 R L + + L + N Sbjct: 809 DGKGGKTGARGLSNMIMQLRKLCNHPFVFDEVENQMNPT-----------------NTSN 851 Query: 482 ATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMS 539 W + E L L ++ +VL+ A +E LR R GI+ Sbjct: 852 DLLWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDFLRFR-GIQYLRLDGTTK 910 Query: 540 IIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 +R F D+ LL + G G N Q A ++++D +NP Q R Sbjct: 911 SEDRSELLRLFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAH 970 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ ++++I + + ++ LD GR S D L + Sbjct: 971 RIGQKNEVRILRLISSASVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRTLL 1030 Query: 659 QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 +T ++ + E L L + D L+ E+A+ Sbjct: 1031 ETADMAEVGEQEEMDDEELNMILARNEDELVTFQQLDDERAR 1072 >UniRef50_Q6CVY8 KLLA0B08327p n=2 Tax=Saccharomycetaceae RepID=Q6CVY8_KLULA Length = 1534 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 125/704 (17%), Positives = 228/704 (32%), Gaps = 60/704 (8%) Query: 88 LDTEESGVALREVFLDS-KLVFSKPQDRLFAGQIDRMDRFAL-RYRARKYSSEQFRMPYS 145 D + E LD+ +L D+ A D ++R + Y E+ + S Sbjct: 618 KDQQSFTKDKIESHLDTQELSEDNVGDKNGADSDDDLERERIDYYEVAHSIKEEVKQQPS 677 Query: 146 GLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAER 202 L G +L +QL + + +LADE+GLGKTI+ +L G Sbjct: 678 ILVGG--TLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGP 735 Query: 203 VLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARR 261 L+IVP + W E + LR F A +V+ + ++ + Sbjct: 736 FLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIK 795 Query: 262 SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGM 321 + L + +W ++DE H + ++A S+ + H L+LT TP Q + Sbjct: 796 ERPL---LSKIKWVHTIIDEGHRM---KNAQSKLSLTLNTY-YHSDYRLILTGTPLQNNL 848 Query: 322 ESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQD 381 +A L + P F+ F E + LS +E ++ + + Sbjct: 849 PELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKI----ALSEEETLLVIRRLHKVL 904 Query: 382 IEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGF-PKRELHTIKLPL 440 LL+ D E + E V L++ + F + Sbjct: 905 RPFLLRRLKKDVEKDLPDKVEKVLKC-KMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSS 963 Query: 441 PTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS 500 +++ I E+ + N T W + E L L Sbjct: 964 RGFNNQIMQLRKICNHPFVFEEVEDQIN-------PARETNDTIWRSAGKFELLERILPK 1016 Query: 501 HR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ 558 + +VL+ +E LR ++ +R F ++ Sbjct: 1017 FKATGHRVLIFFQMTQVMDIMEDFLRY-LDMKYLRLDGHTKSDDRTALLNTFNAPNSDYF 1075 Query: 559 -VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTA 617 LL + G G N Q A +++FD +NP Q R RIGQ ++++I + + Sbjct: 1076 CFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSV 1135 Query: 618 QSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS----------------PDQTE 661 + ++ H LD G+ S + L S ++ + Sbjct: 1136 EEAILDKAHAKLDIDGKVIQAGKFDNKSTAEEQEALLRSLLEAEEEEKKRRELGIEEEEQ 1195 Query: 662 GFDDLIKNCREQHE------------ALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQ 709 D+ + ++E ++ Q+E G L +S E E+ + Sbjct: 1196 LDDNELNEILARNENEIKVFQELDAQRIRTQMENGITNRLMENSELPECYNVDIEAKLAE 1255 Query: 710 DDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPG 753 ++ N+ + + D L + D G Sbjct: 1256 EEKQNVFVGGRGNRERRTAHYSDELSEEQWLRQFEVSENEDEEG 1299 >UniRef50_Q7RYI6 SNF2-family ATP dependent chromatin remodeling factor snf21 n=8 Tax=Leotiomyceta RepID=Q7RYI6_NEUCR Length = 1455 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 108/588 (18%), Positives = 198/588 (33%), Gaps = 48/588 (8%) Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIE 186 Y E+ S L G +L +QL + + +LADE+GLGKTI+ Sbjct: 489 YYAVAHRIKEEVTEQASILVGG--TLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQ 546 Query: 187 AGMILHQQLLSGA-AERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYN 244 ++ + L+IVP + W +E + ++ ++ Sbjct: 547 TISLVTYLIEKKQQNGPYLVIVPLSTLTNWNLEFDKWAPSVAKIVYKGPPNTRKLQQEKI 606 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAE 304 Q+++ + ++ + + L + +W +++DE H + ++A S+ I+Q Sbjct: 607 RRGEFQVLLTTYEYIIKDRPL---LSKIKWFHMIIDEGHRM---KNANSKLSATIQQF-Y 659 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNK 364 L+LT TP Q + ++ L + PN F F E + + Sbjct: 660 STRFRLILTGTPLQNNLAELWSMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKM----E 715 Query: 365 LSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG 424 L+ +E ++ + + LL+ D E + E V + L++ Sbjct: 716 LTEEEQILVIRRLHKVLRPFLLRRLKKDVEKDLPDKTEKVIKC-KFSALQQRLYKQMVTH 774 Query: 425 VKGFPK---------RELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ 475 K R L + + L + Sbjct: 775 QKILVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDEVENQMNPT--------------- 819 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAV 533 N W + E L L ++ +VL+ A +E LR R GI+ Sbjct: 820 --NTSNDLLWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDFLRFR-GIQYLR 876 Query: 534 FHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQ 592 +R F D+ LL + G G N Q A ++++D +NP Q Sbjct: 877 LDGTTKAEDRSELLRLFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQ 936 Query: 593 RIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLIN 652 R RIGQ ++++I + + ++ LD GR S D Sbjct: 937 AQDRAHRIGQKNEVRILRLISSASVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDA 996 Query: 653 YLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 L + +T ++ + E L L + D L+ E+A+ Sbjct: 997 MLRTLLETADMAEVGEQEEMDDEELNMILARNEDELVTFQQLDDERAR 1044 >UniRef50_B0ETQ4 Chromodomain helicase hrp1, putative n=2 Tax=Entamoeba RepID=B0ETQ4_ENTDI Length = 1249 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 101/654 (15%), Positives = 202/654 (30%), Gaps = 92/654 (14%) Query: 148 RGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQL-LSGAAERVL 204 +L +QL + + +LADE+GLGKT++ L L Sbjct: 296 YKHGNTLRSYQLEGHNWLVFNWCRGKGCILADEMGLGKTVQVVSFLEHLYSFQKLQGPFL 355 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDT------------EQLV 252 I+VP ++ W E+L ++ ++ + Y + ++ Sbjct: 356 IVVPLSMIEHWHREILEWTDMNVVIYHGSKGNRQLVKHYEWYYKDFQGKLIPGHLKFHVL 415 Query: 253 ICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLL 312 + + + E L + W + VVDEAH L ++ S+ +A+ + +LL Sbjct: 416 LTTYEIVISDW---EDLSKISWLVTVVDEAHRL---KNKDSKLLKALCNI--QTNHKVLL 467 Query: 313 TATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNM 372 T TP Q + + L ++P F +F E + A+ V Sbjct: 468 TGTPIQNNLGELWTLLNYIEPKTFSSLEEFDHEFNSLDKSAEQVNK-------------- 513 Query: 373 LGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRE 432 + E L+ ++ E + ++E + ++ + +R + F + Sbjct: 514 ----LQESIKPFFLRRMKNEVEKSIPPKEETIIE-VELTMVQKQYYRALYEKNREFLNKG 568 Query: 433 --------LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATW 484 L + + L + G+ + + Sbjct: 569 CVGSNVPNLQNLMMQLRKVCNHPYLIPGVEEKDT------------AQFPEGSPDYFNQL 616 Query: 485 WNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 ++ L L KVL+ +E+ L+ + G + + Sbjct: 617 IRSSGKLVLLDKLLPKLYADHHKVLIFSQLKKVLNIIEKYLKYK-GYFYERLDGSIKSED 675 Query: 543 RDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 R A F + LLC+ G G N A ++++D +NP Q R RIG Sbjct: 676 RQNAIDRFMNPEMNRFIFLLCTRAGGFGINLSEADTVIIYDSDWNPQNDLQAQARCHRIG 735 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC-----PTGRTIYDSVYNDLINYLAS 656 Q +++++ + T + + L + + +LI L Sbjct: 736 QKKEVKVYRLVSKNTYERYMFERASMKLGLDQAVLANITTSSDPKDKQQPSKELIESLLR 795 Query: 657 PDQTEGFDDLIKNCREQHEALKAQLEQGR---------DRLLEIHSNGGEKAQALAESIE 707 F D ++ + E Q+ + R + L + E+I+ Sbjct: 796 NGAYGAFKDDEESSSKFCEEDIEQILEKRSSKVVWKGGENSLSGSFSTATFQSETGETID 855 Query: 708 EQDDD------------TNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVP 749 D+ + L ++F N +L + L Sbjct: 856 VNDEHFWEKVLPKDRNVSQLTKIFNDVFGGRAGRTSQARRNSWILNEKEQYLKD 909 >UniRef50_B6Q1R2 RSC complex subunit (Sth1), putative n=2 Tax=Trichocomaceae RepID=B6Q1R2_PENMQ Length = 1430 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 103/580 (17%), Positives = 200/580 (34%), Gaps = 31/580 (5%) Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIE 186 Y E+ S L G +L +QL + + +LADE+GLGKTI+ Sbjct: 529 YYAVAHRIKEEVTAQPSILVGG--TLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQ 586 Query: 187 AGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYN 244 ++ + + L+IVP + W +E + ++ ++ Q Sbjct: 587 TISLITYLIEVKKNSGPFLVIVPLSTLTNWHLEFDKWAPSVTKVVYKGPPAVRKQQQQTI 646 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAE 304 + Q+++ + ++ + + L + +W ++VDE H + ++A S+ + Q Sbjct: 647 RYGQFQVLLTTYEYIIKDRPL---LSKIKWQHMIVDEGHRM---KNAQSKLSSTLTQY-Y 699 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNK 364 + L+LT TP Q + +A L + P+ F F E + Sbjct: 700 NTRYRLILTGTPLQNNLPELWALLNFVLPSIFKSVKSFDEWFNTPFANTGNQDRID---- 755 Query: 365 LSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG 424 L+ +E ++ + + LL+ D E +QE V L++ Sbjct: 756 LTEEEQLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKQERVIKC-RSSALQAKLYKQLLTH 814 Query: 425 VKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATW 484 K K+ + +++ + E M G N Sbjct: 815 NKMVVSDG-KGGKIGMRGLSNMLMQMRKLCNHPFVFEPVEDQMN-------PGRGTNDLI 866 Query: 485 WNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 W + E L L + +VL+ +E LR R G++ + Sbjct: 867 WRTAGKFELLDRVLPKFKATGHRVLLFFQMTQIMNIMEDFLRFR-GLKYLRLDGSTKSDD 925 Query: 543 RDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 R F ++ LL + G G N Q A ++++D +NP Q R RIG Sbjct: 926 RSELLKLFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIG 985 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQ-T 660 Q ++++I + + ++ LD G+ S + L + + Sbjct: 986 QKNEVRILRLITSNSVEEKILGRAQFKLDMDGKVIQAGKFDNKSTNEEREALLRTLLESA 1045 Query: 661 EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 E + L + L + + + L ++A+ Sbjct: 1046 EAGEQLNDQDEMDDDDLNEIMARSEEELTIFQKIDQDRAK 1085 >UniRef50_P25439 ATP-dependent helicase brm n=49 Tax=Eukaryota RepID=BRM_DROME Length = 1638 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 93/583 (15%), Positives = 199/583 (34%), Gaps = 29/583 (4%) Query: 151 RTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAA-ERVLIIV 207 +L +Q+ + + +LADE+GLGKTI+ ++ + LIIV Sbjct: 770 NGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIV 829 Query: 208 PETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRL 266 P + W++E + + + +++ + ++ + K Sbjct: 830 PLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQMRATKFNVLLTTYEYVIKDKAV- 888 Query: 267 EHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFA 326 L + +W +++DE H + ++ + Q + P LLLT TP Q + +A Sbjct: 889 --LAKIQWKYMIIDEGHRM---KNHHCKLTQVLNT-HYIAPYRLLLTGTPLQNKLPELWA 942 Query: 327 RLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLL 386 L L P+ F + F + +L+ +E ++ + + LL Sbjct: 943 LLNFLLPSIFKSCSTFEQWFNAPFATTGEKV------ELNEEETILIIRRLHKVLRPFLL 996 Query: 387 QAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFP--KRELHTIKLPLPTQY 444 + + E + E + D RVL+++ ++ + K Sbjct: 997 RRLKKEVEHQLPDKVEYIIKC-DMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALM 1055 Query: 445 QTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR-- 502 T +++ + + + + + E L L + Sbjct: 1056 NTIVQLRKLCNHPFMFQHIEEKYC--DHTGGHGVVSGPDLYRVSGKFELLDRILPKLKAT 1113 Query: 503 SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLL 561 + +VL+ C +E L R+ +R F + + LL Sbjct: 1114 NHRVLLFCQMTQCMTIIEDYLGWRQ-FGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLL 1172 Query: 562 CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVL 621 + G G N Q A +V+FD +NP Q R RIGQ +++++ + + + Sbjct: 1173 STRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERI 1232 Query: 622 VRWYHEGLDAFEHTCPTGRTIYDSVYNDL---INYLASPDQTEGFDDLIKNCREQHEALK 678 + L+ E G S ++ + + D E ++ E + Sbjct: 1233 LAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEMINMMI 1292 Query: 679 AQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 A+ E+ + + + ++ + + E D++ L + Sbjct: 1293 ARSEEEIEIFKRMDAERKKEDEEIHPGRERLIDESELPDWLTK 1335 >UniRef50_C8VN25 Catalytic subunit of the SWI/SNF chromatin remodeling complex (Eurofung) n=11 Tax=Leotiomyceta RepID=C8VN25_EMENI Length = 1407 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 110/634 (17%), Positives = 209/634 (32%), Gaps = 31/634 (4%) Query: 75 KEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARK 134 + +G L + + ++ A R + + R Y Sbjct: 460 NQTDGFLKQLAASVRQQQRNQAERYGEEHDFDDDDDEDIASGSDEEGEGRRKIDYYAVAH 519 Query: 135 YSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILH 192 E+ S L G +L +Q+ + + +LADE+GLGKTI+ ++ Sbjct: 520 RIKEEITEQPSILVGG--TLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLIT 577 Query: 193 QQLLSGAA-ERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQ 250 + L+IVP + W +E + ++ ++ A Q + Q Sbjct: 578 HIIERKRNNGPFLVIVPLSTLTNWNLEFEKWAPSVSRIVYKGPPNARKQQQQNIRWGNFQ 637 Query: 251 LVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVL 310 +++ + ++ + + L + +W ++VDE H + ++ S+ + Q L Sbjct: 638 VLLTTYEYIIKDRPI---LSKIKWTHMIVDEGHRM---KNTQSKLSSTLSQY-YTSRYRL 690 Query: 311 LLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDEL 370 +LT TP Q + +A L + PN F F E + L+ +E Sbjct: 691 ILTGTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMD----LTEEEQ 746 Query: 371 NMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPK 430 ++ + + LL+ D E +QE V L + K Sbjct: 747 LLVIRRLHKVLRPFLLRRLKKDVEKDLPDKQERVIKC-RFSALQAKLNKQLATHNKMVVS 805 Query: 431 RELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPR 490 K+ + +++ + E + G N W + Sbjct: 806 DG-KGGKVGMRGLSNMLMQLRKLCNHPFVFEQVEDQVN-------PGRGTNDLIWRTAGK 857 Query: 491 VEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAA 548 E L L + +VL+ +E LR R G++ +R Sbjct: 858 FELLDRILPKFKATGHRVLMFFQMTQIMNIMEDFLRLR-GMKYLRLDGSTKSDDRSDLLK 916 Query: 549 WFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 F D+ LL + G G N Q A +++FD +NP Q R RIGQ ++++ Sbjct: 917 LFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVR 976 Query: 608 IHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS-PDQTEGFDDL 666 I + + ++ LD G+ S + L + + EG D Sbjct: 977 ILRLITSNSVEEKILERAQFKLDMDGKVIQAGKFDNKSTNEERDALLRTLLETAEGTDQA 1036 Query: 667 IKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 + L + + + L E+ + Sbjct: 1037 GDQDEMDDDDLNNIMARSDEELAVFQRMDRERQK 1070 >UniRef50_Q4PFD0 Putative uncharacterized protein n=3 Tax=Basidiomycota RepID=Q4PFD0_USTMA Length = 1692 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 116/713 (16%), Positives = 237/713 (33%), Gaps = 35/713 (4%) Query: 72 EEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYR 131 ++V + +E GVA+ E + +DR G++D Y Sbjct: 718 DDVHADAIAAERAVEESANQEVGVAVDETMFGATRQDDPSEDR---GKVD-------YYS 767 Query: 132 ARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGM 189 +E+ S L G +L +Q+ + + +LADE+GLGKTI+ Sbjct: 768 VAHRITERITQQPSILSGG--TLKEYQMKGLQWMISLYNNRLNGILADEMGLGKTIQTIS 825 Query: 190 ILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFD 247 ++ + L+IVP + W+ E + ++ ++ Q Sbjct: 826 LITYLMEFKKQNGPFLVIVPLSTLTNWVNEFNKWAPSVSTLIYKGTPNVRKQLTGRLRSM 885 Query: 248 TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVP 307 Q+++ + ++ + K L + +W +++DE H + ++ S+ + Q Sbjct: 886 NFQVLLTTYEYIIKDKHL---LGKIKWVHMIIDEGHRM---KNTQSKLTITLTQF-YTSR 938 Query: 308 GVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSN 367 LLLT TP Q + +A L + P F+ F E + G L+ Sbjct: 939 YRLLLTGTPLQNNLPELWALLNFVLPRIFNSVKSFDEWFNTPFTNTGSE----GGMMLNE 994 Query: 368 DELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKG 427 +E ++ + + + LL+ D + E V L++ + Sbjct: 995 EEALLIIKRLHKVLRPFLLRRLKKDVASELPDKVEKVIKC-KMSALQLKLYQQMKKHKMI 1053 Query: 428 FPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNF 487 + Q + + + + E + + + Sbjct: 1054 LS--GEDNSTAGKKAKPQGIRGLQNAIMQLRKICNHPYVFEQVELAINPTKENGPDLYRV 1111 Query: 488 DPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDR 545 + E L L +VL+ A +E LR R G + +R + Sbjct: 1112 AGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFLRYR-GFKYLRLDGSTKPDDRSQ 1170 Query: 546 AAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 F + +L + G G N Q A ++++D +NP Q R RIGQ Sbjct: 1171 LLKLFNAPGSDYFVFILSTRAGGLGLNLQSADTVIIYDSDWNPHQDLQAQDRAHRIGQKM 1230 Query: 605 DIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFD 664 +++I EK+ + ++ + L+ G+ + ++ L + + + D Sbjct: 1231 EVRILRLVTEKSVEETILARAQDKLEIEGKVIQAGKFDNQATADERELLLRAMLEADNDD 1290 Query: 665 DLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFD 724 + + + L L +G + E+ + E + L M + Sbjct: 1291 EDDDDGDFNDDELNQLLARGEHEVPIFQQIDNERQASDTEFWKSLGYKGKLPERLMQESE 1350 Query: 725 IIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDR-EVALAREDAQF 776 + + Q D + + + + +T D+ AL +D Sbjct: 1351 LPAVYQQDFDADKLEDEVEEEQPATRKRNVVHYDDGLTEDQFLRALEDDDVDL 1403 >UniRef50_A9TXL2 SWI/SNF class chromatin remodeling complex protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TXL2_PHYPA Length = 2174 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 120/700 (17%), Positives = 230/700 (32%), Gaps = 62/700 (8%) Query: 38 GENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVAL 97 +R+ A ++ V + +T + + +E G L +G +L ++ L Sbjct: 1363 QRDRINALKNNDVAGYLRMVQETKSDRVEKLL-----RETEGYLQKLGVKLQKQKELARL 1417 Query: 98 REVFLDSKLVFSKPQDRLFAGQIDRM-DRFALRYRARKYSSEQFRMPYSGLRGQRTSLIP 156 ++ VF + + Y E L G + L Sbjct: 1418 ENDHSENNSVFEVAKQPDAKDNTQHYLESNENYYSLAHSVKEIVDEQPLTLEGGK--LRE 1475 Query: 157 HQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQH 213 +QL+ + + +LADE+GLGKT++ ++ + LI+VP ++ Sbjct: 1476 YQLSGLRWLVSLYNNHLNGILADEMGLGKTVQVIALICYLMEAKNDHGPFLIVVPSSVLP 1535 Query: 214 QWLVEMLRRFNLRFALFDDERYAEAQHDAYN---PFDTEQLVICSLDFARRSKQRLEHLC 270 WL E+ R R ++ + + Y +++ + +F K L Sbjct: 1536 NWLAELSRW-APRVSVIAYCGAPDERRRLYKEEIQPQQFNVLVTTYEFLMS-KHDRPKLA 1593 Query: 271 EAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRL 330 + W +++DE H + ++A + ++Q LLLT TP Q +E +A L Sbjct: 1594 KIPWHYIIIDEGHRI---KNASCKLNAELKQ--YQSTHRLLLTGTPIQNNLEELWALLNF 1648 Query: 331 LDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAAN 390 L P+ F+ F + L+ +E ++ + + +L+ Sbjct: 1649 LLPSIFNSSDDFAQWFNKPFENVADPTA-EEQALLTEEENLLIINRLHQVLRPFMLRRLK 1707 Query: 391 SDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGF---PKRELHTIKLPLPTQYQTA 447 E+ + E + + ++L ++ ++ +K R + + L Sbjct: 1708 HKVENELPEKIERLVRC-EASAYQKLLMKHVKDKMKSLNHAKGRSIQNTVMELRNICNHP 1766 Query: 448 IKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWW-NFDPRVEWLMGYLTSHR---- 502 L+ E + F ++E L L + Sbjct: 1767 Y----------------LSQLHSEETEKVLPPHYLPIVVRFCGKLEMLDRILPKLKAANH 1810 Query: 503 ---------SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEE 553 VL +E L + G + ER F Sbjct: 1811 KVSLMTSRKGHSVLFFSTMTRLLDVMEDYLEWK-GYKYLRLDGSTGGSERGALIQDFNAP 1869 Query: 554 DTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPY 612 + A LL G G N Q A +++FD +NP + Q R RIGQ D+ + Sbjct: 1870 QSEAFIFLLSIRAGGIGINLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 1929 Query: 613 LEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCRE 672 K+ + + L + G ++ D YL S + +++ + Sbjct: 1930 TVKSIEEHVRASAEYKLGVANQSITAGFFDDNTSAEDRREYLESLLREPKKEEVALVLDD 1989 Query: 673 QHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDD 712 EAL L + + + ++AQ E I D D Sbjct: 1990 --EALNDLLARSDAEIDIFEAVDKQRAQE--EQIAFLDQD 2025 >UniRef50_D0N059 Chromodomain-helicase-DNA-binding protein, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0N059_PHYIN Length = 2158 Score = 534 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 122/718 (16%), Positives = 226/718 (31%), Gaps = 81/718 (11%) Query: 21 TVVAVDARTVTLLFPSTGENRLY--ARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEEN 78 T++ + V F S +Y VT++ + +G + + Sbjct: 724 TLIGASSHQVLFHFHSPRPAFMYPPYCQAKQVTKLRLEKIPDDAAPEGSKYAQYSYNQFK 783 Query: 79 GLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAG----QIDRMDRFALRYRARK 134 +L D + + + S P L+AG ID + FA R Sbjct: 784 RMLKVGVAEPDVASAASTQTLMQHANYSAPSGPMQHLYAGVVDNSIDPHEHFASFLPERS 843 Query: 135 YSS----------------EQFRMPYSGLRGQRTSLIPHQLNIAHDVGR--RHAPRVLLA 176 ++ E S +L +Q+ + + + +LA Sbjct: 844 NAANSGSHAKSAGSSGDANEFVPYEQSPTYKGGRTLRAYQVEGLNWMVSCIKAQRSCILA 903 Query: 177 DEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY 235 DE+GLGKT++ ++ LI+VP + W E+ +L ++ D Sbjct: 904 DEMGLGKTVQIVSLIEHMKSEESIRGPYLIVVPLSTIQHWRREIESWTDLNVCVYHDIGD 963 Query: 236 AEAQHDAY-----------------NPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLV 278 + A N +++ + + E W L+V Sbjct: 964 RSTKFTAKDMRAVVRDQEWYYPGLGNSIFKFHILLTTFETILAD---FEEFEHIHWRLVV 1020 Query: 279 VDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHD 338 VDEAH L + A SR + + L HV +LLT TP Q + + L L+P +F Sbjct: 1021 VDEAHRL---KSAGSRVLKMMRVL--HVDRKVLLTGTPLQNNTQELWVLLNYLEPVKFAS 1075 Query: 339 FAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQS 398 +F + G S +++ L +++ +L+ D E + Sbjct: 1076 LEEFNQNF---------------GKLHSQEQVVRLQQLLA----PFILRRVKEDVEKSIP 1116 Query: 399 ARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARK 458 ++E + + ++ + +R + K F R LPT +++ Sbjct: 1117 PKEETI-VSVELTTLQKQYYRAIYDKNKSFLYRGTKN---GLPTLNNIQLQLRKCCNHPF 1172 Query: 459 SAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATA 516 + L ++ + + + K+L+ Sbjct: 1173 LIKGVEERELDELGSNPTPAQVMEKTIECSGKMMLVSKLIPKLKRDGHKILIFSQFLKQL 1232 Query: 517 LQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFA 575 LE+ E R A F+ + + LL ++ G G N A Sbjct: 1233 DLLERY-CEANSFVFERLDGSTGGSVRQSAIDRFSRPHSKSFIFLLSTKAGGVGINLIAA 1291 Query: 576 SHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHT 635 +++FD +NP Q R RIGQ +QI+ T +S + L Sbjct: 1292 DTVIIFDSDWNPMNDLQAQSRCHRIGQKKSVQIYRLVTRNTYESEMFDRASRKLGLEHAV 1351 Query: 636 CPTGRTIYDSV----YNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLL 689 T +S + + L +D +E E + + R+L Sbjct: 1352 LGTASFNENSQITKPSAEQLVELLKRGAYALMEDDDTASKEFAERDIETILKENARVL 1409 >UniRef50_B5DRW4 GA28654 n=7 Tax=Coelomata RepID=B5DRW4_DROPS Length = 1677 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 95/615 (15%), Positives = 206/615 (33%), Gaps = 30/615 (4%) Query: 119 QIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLA 176 + D Y + ++ + + + L +Q+ + + +LA Sbjct: 776 EDDEYKTEEQTYYSIAHTIHEKVYEQAAIM-VNGQLKEYQIKGLEWLVSLYNNNLNGILA 834 Query: 177 DEVGLGKTIEAGMILHQQLLSGAA-ERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDER 234 DE+GLGKTI+ ++ + LIIVP + W++E + + + Sbjct: 835 DEMGLGKTIQTISLVTYLMDRKKVMGPFLIIVPLSTLPNWVLEFEKWAPAVSVVSYKGSP 894 Query: 235 YAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSR 294 +++ + ++ + K L + +W +++DE H + ++ + Sbjct: 895 QGRRLLQNQMRATKFNVLLTTYEYVIKDKAV---LAKIQWKYMIIDEGHRM---KNHHCK 948 Query: 295 EYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVAD 354 Q + P LLLT TP Q + +A L L P+ F + F + Sbjct: 949 LTQVLNT-HYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG 1007 Query: 355 AVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTS 414 +L+ +E ++ + + LL+ + E + E + D Sbjct: 1008 EKV------ELNEEETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKC-DMSALQ 1060 Query: 415 RVLFRNTRNGVKGFP--KRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPER 472 RVL+++ ++ + K T +++ + + + Sbjct: 1061 RVLYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYC--DH 1118 Query: 473 IYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIR 530 + + E L L + + +VL+ C +E L R+ Sbjct: 1119 TGGHGVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLSWRQ-FG 1177 Query: 531 AAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDL 589 +R F + + LL + G G N Q A +V+FD +NP Sbjct: 1178 YLRLDGTTKAEDRGELLRKFNAKGSDIFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQ 1237 Query: 590 LEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYND 649 Q R RIGQ +++++ + + ++ L+ E G S ++ Sbjct: 1238 DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSE 1297 Query: 650 L---INYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESI 706 + + D E ++ E + A+ E+ + + + ++ + Sbjct: 1298 RQQFLQTILHQDDNEEEEENEVPDDEMINMMIARSEEEVEIFKRMDVDRKKEDDEIHPGR 1357 Query: 707 EEQDDDTNLIAFAMN 721 E D++ L + Sbjct: 1358 ERLIDESELPDWLTK 1372 >UniRef50_Q3TKT4 Transcription activator BRG1 n=33 Tax=Euteleostomi RepID=SMCA4_MOUSE Length = 1613 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 108/640 (16%), Positives = 214/640 (33%), Gaps = 28/640 (4%) Query: 93 SGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRT 152 + EV + +K G + R Y A ++ + S L Sbjct: 694 DSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGV 753 Query: 153 SLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAA-ERVLIIVPE 209 L +Q+ + + +LADE+GLGKTI+ ++ + LIIVP Sbjct: 754 -LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPL 812 Query: 210 TLQHQWLVEMLRRFNLRFAL-FDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEH 268 + W E + + + A +++ + ++ + K Sbjct: 813 STLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHI--- 869 Query: 269 LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 L + W ++VDE H + ++ + Q + P LLLT TP Q + +A L Sbjct: 870 LAKIRWKYMIVDEGHRM---KNHHCKLTQVLNT-HYVAPRRLLLTGTPLQNKLPELWALL 925 Query: 329 RLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQA 388 L P F + F + + L+ +E ++ + + LL+ Sbjct: 926 NFLLPTIFKSCSTFEQWFNAPFAMTGEKVD------LNEEETILIIRRLHKVLRPFLLRR 979 Query: 389 ANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG--VKGFPKRELHTIKLPLPTQYQT 446 + E + E V D RVL+R+ + + + K T T Sbjct: 980 LKKEVEAQLPEKVEYVIKC-DMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNT 1038 Query: 447 AIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQ 504 +++ I + + + + + E L L R + Sbjct: 1039 IMQLRKICNHPYMFQHI-EESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNH 1097 Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCS 563 KVL+ C + +E R G + +R F E + LL + Sbjct: 1098 KVLLFCQMTSLMTIMEDYFAYR-GFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLST 1156 Query: 564 EIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVR 623 G G N Q A +++FD +NP Q R RIGQ +++++ + + ++ Sbjct: 1157 RAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILA 1216 Query: 624 WYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHE--ALKAQL 681 L+ + G S ++ +L + + E D+ + + A+ Sbjct: 1217 AAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARH 1276 Query: 682 EQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 E+ D + + + + + ++ L ++ + Sbjct: 1277 EEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIK 1316 >UniRef50_A5DXH8 SNF2-family ATP dependent chromatin remodeling factor snf21 n=2 Tax=Saccharomycetales RepID=A5DXH8_LODEL Length = 1400 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 116/730 (15%), Positives = 241/730 (33%), Gaps = 45/730 (6%) Query: 67 WQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRF 126 + + E NG + + + + E + A + + Sbjct: 508 TEQVRAQQTEANGFFATPRSGSPEQLAT-PVPEGLEQQGGETGGAAGQAGADIKEELRDK 566 Query: 127 ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKT 184 Y E+ + L G +L +QL + + +LADE+GLGKT Sbjct: 567 TDYYEVAHKIKEKIEKQSTLLVGG--TLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKT 624 Query: 185 IEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAY 243 I++ ++ + ++ L+IVP + W +E + ++ ++ + + Sbjct: 625 IQSISLITYLIEKKHEQKFLVIVPLSTITNWTLEFEKWAPAVKVIVYKGSQQQRKSLQSE 684 Query: 244 NPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLA 303 + Q+++ + ++ R + L + + +++DE H + ++ S+ Q + Q Sbjct: 685 VRLGSFQVMLTTYEYVIRERPL---LSKFYYSHMIIDEGHRM---KNTNSKLSQTLRQY- 737 Query: 304 EHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGN 363 L+LT TP Q + +A L + P F+ F E A + Sbjct: 738 YRTKNRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGAQEKI---- 793 Query: 364 KLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRN 423 +L+ +E ++ + + LL+ D E + E V + G VL++ Sbjct: 794 ELTEEESLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKC-NLSGLQYVLYQQMLK 852 Query: 424 GVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNAT 483 F E+ K + +++ + E+ E + + N Sbjct: 853 HNALFVGAEVGGAKSGIKGLNNKIMQLRKVCNHPFVFEEV-------EAVLNSQKLTNEL 905 Query: 484 WWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSII 541 W + E L L + +VL+ +E LR ++ ++ Sbjct: 906 LWRTSGKFELLDRVLPKFKASGHRVLMFFQMTQIMDIMEDFLRLKD-MKYMRLDGSTKAD 964 Query: 542 ERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI 600 ER F D+ LL + G G N Q A +++FD +NP Q R RI Sbjct: 965 ERQDMLKEFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRI 1024 Query: 601 GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYND----LINYLAS 656 GQ ++++I + + +++ H+ L+ G+ S + L L + Sbjct: 1025 GQKNEVRILRLISNDSVEEMILERAHQKLEIDGKVIQAGKFDNKSTAEEQEAFLKRLLEA 1084 Query: 657 PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLI 716 D+ E+ + A+ ++ + + + E+D+ + Sbjct: 1085 DATGGDDDENDSLDDEELNEILARSDEEKALFNSMDEKRRLNDPYTQHRLIEKDELPAIF 1144 Query: 717 ------------AFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFD 764 + + + DD L D + I Sbjct: 1145 TEDISHHFEKDTTELSRMREKKKVMYDDGLSEEQWLRAMDDDDDTVEAAIGRKQARIANR 1204 Query: 765 REVALAREDA 774 + RE Sbjct: 1205 KRNKAKREGL 1214 >UniRef50_C4JNC7 SNF2-family ATP dependent chromatin remodeling factor snf21 n=3 Tax=Onygenales RepID=C4JNC7_UNCRE Length = 1435 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 104/580 (17%), Positives = 197/580 (33%), Gaps = 31/580 (5%) Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIE 186 Y E S L G +L +QL + + +LADE+GLGKTI+ Sbjct: 536 YYAVAHRIKEDVTAQPSILVGG--TLKEYQLRGLQWMISLYNNNLNGILADEMGLGKTIQ 593 Query: 187 AGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYN 244 ++ + L+IVP + W +E + ++ ++ + Sbjct: 594 TISLITYLIELKKQNGPFLVIVPLSTLTNWTLEFEKWAPSVSRIVYKGPPNSRKAQQQAI 653 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAE 304 + Q+++ + ++ + + L + +W ++VDE H + ++ S+ Q + Q Sbjct: 654 RWGQFQVLLTTYEYIIKDRPI---LSKVKWVHMIVDEGHRM---KNTQSKLTQTLTQY-Y 706 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNK 364 L+LT TP Q + +A L + PN F F E + + Sbjct: 707 TSRYRLILTGTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRM----E 762 Query: 365 LSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG 424 LS +E ++ + + LL+ D E +QE V L++ Sbjct: 763 LSEEEQLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKQERVIKC-RFSALQAKLYKQLMTH 821 Query: 425 VKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATW 484 K K + +++ + E +M +G N Sbjct: 822 NKMVVSDG-KGGKTGMRGLSNMLMQLRKLCNHPFVFESVEEEMN-------PGKGTNDLI 873 Query: 485 WNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 W + E L L + +VL+ +E LR R G++ + Sbjct: 874 WRTAGKFELLDRVLPKFKASGHRVLMFFQMTQIMNIMEDFLRFR-GLKYLRLDGSTKSDD 932 Query: 543 RDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 R F + LL + G G N Q A ++++D +NP Q R RIG Sbjct: 933 RSELLRLFNAPGSDYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIG 992 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 Q ++++I + + ++ LD G+ S + L + +T Sbjct: 993 QKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGKFDNKSTNEERDALLRTLLETA 1052 Query: 662 GF-DDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 D + L + + + L+ E+ + Sbjct: 1053 DSADQAGNEDEMDDDDLNDIMARSDEELVLFQKLDQERLK 1092 >UniRef50_Q656N0 Putative STH1 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q656N0_ORYSJ Length = 3389 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 101/591 (17%), Positives = 199/591 (33%), Gaps = 42/591 (7%) Query: 123 MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVG 180 ++ Y+ E S L+G + L +Q+N + + +LADE+G Sbjct: 987 LESNEKYYQLAHSVKEVVNDQPSYLQGGK--LREYQMNGLRWLVSLYNNNLNGILADEMG 1044 Query: 181 LGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEA 238 LGKT++ +L + L++VP ++ W E+ ++ + Sbjct: 1045 LGKTVQVISLLCYLMETKNDRGPFLVVVPSSVLPGWESELNFWAPSINKIAYAGPPEERR 1104 Query: 239 QHDAYNPF-DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQ 297 + +++ + ++ +K L + +W +++DE H + ++A + Sbjct: 1105 KLFKEMIVHQKFNVLLTTYEYLM-NKHDRPKLSKIQWHYIIIDEGHRI---KNASCKLNA 1160 Query: 298 AIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVA 357 ++ LLLT TP Q +E +A L L PN F+ F + +P Sbjct: 1161 DLKH--YRSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFN--KPFESNGD 1216 Query: 358 MLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVL 417 LS +E ++ + + +L+ E+ + E + ++L Sbjct: 1217 SSTEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCWP-SAYQKLL 1275 Query: 418 FRNTRNGVKGF---PKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIY 474 + + G R +H + L L+ E I Sbjct: 1276 IKRVEENLGGIGAVKVRSVHNTVMELRNICNHPY----------------LSQLHVEEIE 1319 Query: 475 QEFEGDNATWW-NFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRA 531 ++E L L + +VL+ +E L ++ + Sbjct: 1320 GYLPRHYLPSILRLCGKLEMLDRLLPKLKATGHRVLLFSTMTRLLDVMEDYLVWKK-YKY 1378 Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLL 590 S ER F ++ A LL G G N Q A +++FD +NP + Sbjct: 1379 LRLDGHTSGQERGALIDKFNNPNSQAFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVD 1438 Query: 591 EQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDL 650 Q R RIGQ ++ + +T + + L + G ++ D Sbjct: 1439 LQAQARAHRIGQKKEVLVLRLETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDR 1498 Query: 651 INYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQA 701 YL S + ++ +AL L + D + S ++ + Sbjct: 1499 REYLESLLRGGKKEE--AAPVLDDDALNDLLARSEDEIDIFESIDKQRREE 1547 >UniRef50_O60264 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 n=154 Tax=Eukaryota RepID=SMCA5_HUMAN Length = 1052 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 102/583 (17%), Positives = 194/583 (33%), Gaps = 64/583 (10%) Query: 153 SLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPE 209 L +Q+ + + + +LADE+GLGKT++ +L +++VP+ Sbjct: 179 KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPK 238 Query: 210 TLQHQWLVEMLRR-FNLRFALFDDERYAEAQH-DAYNPFDTEQLVICSLDFARRSKQRLE 267 + H W+ E R LR ++ A + + S + + K Sbjct: 239 STLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSV-- 296 Query: 268 HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 + W LV+DEAH + ++ S+ + + + LLLT TP Q + ++ Sbjct: 297 -FKKFNWRYLVIDEAHRI---KNEKSKLSEIVREF--KTTNRLLLTGTPLQNNLHELWSL 350 Query: 328 LRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQ 387 L L P+ F+ F + D L E + LL+ Sbjct: 351 LNFLLPDVFNSADDFDSWFDTNNCLGDQK----------------LVERLHMVLRPFLLR 394 Query: 388 AANSDSEDAQSARQELVSML----MDRHGTSRVLFRNT--RNGVKGFPKRELHTIKLPLP 441 +D E + ++E+ + M R +R+L ++ N K L I + L Sbjct: 395 RIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLR 454 Query: 442 TQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH 501 G D ++ L L Sbjct: 455 KCCNHPYLFDGAEPGPPYTTD-------------------MHLVTNSGKMVVLDKLLPKL 495 Query: 502 R--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDT-GAQ 558 + +VL+ LE R ER + + E ++ Sbjct: 496 KEQGSRVLIFSQMTRVLDILEDYCMWR-NYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 554 Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ 618 +L + G G N A ++++D +NP + Q + R RIGQ +++ + T + Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614 Query: 619 SVLVRWYHEGLDAFEHTCPTGRTI---YDSVYNDLINYLASPDQTEGFDDLIKNCREQHE 675 +V L GR + + + D + + T F K E Sbjct: 615 ERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFAS--KESEITDE 672 Query: 676 ALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF 718 + LE+G + E++ + ++ + D ++++ F Sbjct: 673 DIDGILERGAKKTAEMNEKLSKMGESSLRNF-TMDTESSVYNF 714 >UniRef50_D1HYB3 Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) n=4 Tax=Magnoliophyta RepID=D1HYB3_VITVI Length = 2266 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 116/684 (16%), Positives = 228/684 (33%), Gaps = 48/684 (7%) Query: 50 VTRVMFNPGDTITSHDGWQMQVEEV-KEENGLLTYIGTRLDTEESGVALREVFLDSKLVF 108 + ++ G D +V+++ KE L +G++L +S EV +D Sbjct: 938 LLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLQEAKSMTRHFEVDMDENRTA 997 Query: 109 SKPQD-RLFAGQIDRMDRFALRYRA-------RKYSSEQFRMPYSGLRGQRTSLIPHQLN 160 + + D D+ + E + L+G + L +Q+N Sbjct: 998 NVVEKNETAVDNEDESDQAKHYLESNEKYYLMAHSIKESIAEQPTCLQGGK--LREYQMN 1055 Query: 161 IAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLV 217 + + +LADE+GLGKT++ ++ + L++VP ++ W Sbjct: 1056 GLRWLVSLYNNHLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVVPSSVLSGWES 1115 Query: 218 EMLRR-FNLRFALFDDERYAEAQHDAYNPF-DTEQLVICSLDFARRSKQRLEHLCEAEWD 275 E+ ++ ++ + +++ + ++ +K L + W Sbjct: 1116 EINFWAPSVNKIVYSGPPEERRKLFKERIVHQKFNVLLTTYEYLM-NKHDRPKLSKIHWH 1174 Query: 276 LLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNR 335 +V+DE H + ++A + ++ LLLT TP Q +E +A L L PN Sbjct: 1175 YIVIDEGHRI---KNASCKLNADLKH--YQSSHRLLLTGTPLQNNLEELWALLNFLLPNI 1229 Query: 336 FHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSED 395 F+ F + +P LS +E ++ + + +L+ E+ Sbjct: 1230 FNSSEDFSQWFN--KPFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRLKHKVEN 1287 Query: 396 AQSARQELVSMLMDRHGTSRVLFRNTRN---GVKGFPKRELHTIKLPLPTQYQTAIKVSG 452 + E + + ++L + + R +H + L Sbjct: 1288 ELPEKIERLVRC-EASAYQKLLMKRVEENLGSIGSTKARSVHNSVMELRNICNHPYLSQL 1346 Query: 453 IMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVIC 510 D L P+ ++E L L + +VL Sbjct: 1347 HAD--------EVDNLIPKHFLP-------PVVRLCGKLEMLDRLLPKLKATDHRVLFFS 1391 Query: 511 AKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEG 569 +E+ L ++ R S +R F + D+ LL G G Sbjct: 1392 TMTRLLDVMEEYLHWKQ-YRYLRLDGHTSGGDRGALIEQFNQPDSPYFIFLLSIRAGGVG 1450 Query: 570 RNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGL 629 N Q A +++FD +NP + Q R RIGQ D+ + +T + + L Sbjct: 1451 VNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRLETVQTVEEQVRASAEHKL 1510 Query: 630 DAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLI-KNCREQHEALKAQLEQGRDRL 688 + G ++ D YL S + ++ + + L A+ E D Sbjct: 1511 GVANQSITAGFFDNNTSAEDRREYLESLLRESKKEEAMPVLDDDALNDLLARSESEIDIF 1570 Query: 689 LEIHSNGGEKAQALAESIEEQDDD 712 I E A + + Q + Sbjct: 1571 ESIDKKRQEAEMATWKKLVGQGME 1594 >UniRef50_Q5K9G4 Putative uncharacterized protein n=2 Tax=Filobasidiella neoformans RepID=Q5K9G4_CRYNE Length = 1558 Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats. Identities = 104/634 (16%), Positives = 207/634 (32%), Gaps = 38/634 (5%) Query: 90 TEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRG 149 +E GVA E+F + + AG++D Y E+ S L G Sbjct: 639 EQEEGVASEEMFGAKRQDGEESGAERRAGKVD-------YYAVAHKIQEKVTKQASILSG 691 Query: 150 QRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGA-AERVLII 206 +L +Q+ + + +LADE+GLGKTI+ ++ + L+I Sbjct: 692 G--TLKDYQVKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLIEKKKQPGPFLVI 749 Query: 207 VPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQR 265 VP + W +E R +R + + Q+ + + ++ + + Sbjct: 750 VPLSTLTNWTMEFERWAPAVRTLILKGSPAVRREAYPRLRAIDFQVCLTTYEYIIKERPL 809 Query: 266 LEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHF 325 L +W +++DE H + ++ S+ Q + + L+LT TP Q + + Sbjct: 810 ---LSRIKWIHMIIDEGHRM---KNVKSKLSQTLNEY-YSSRYRLILTGTPLQNNLPELW 862 Query: 326 ARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPL 385 A L + P F+ F E +++ +E ++ + + + L Sbjct: 863 ALLNFVLPKIFNSVKSFDEWFNAPFANTGGEK-----MEMNEEEALLVVKRLHKVLRPFL 917 Query: 386 LQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQ 445 L+ D E + E V L+ + + K P Sbjct: 918 LRRLKKDVESELPDKVEKVI-YTKMSALQWKLYESVQKY-KTLPTDMSVAKPQKRQNLQN 975 Query: 446 TAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RS 503 +++ I + D + + + E L L Sbjct: 976 ALMQLRKICNHPYVFREVDED-------FTVGNTTDEQIIRVAGKFELLDRILPKLFKTG 1028 Query: 504 QKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLC 562 KVL+ + R G + +R + F + ++ Q +L Sbjct: 1029 HKVLIFFQMTEIMTIVSDFFDFR-GWKYCRLDGSTKAEDRQTLLSTFNDPNSPYQVFILS 1087 Query: 563 SEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLV 622 + G G N Q A ++++D +NP Q R RIGQ ++++ T + +++ Sbjct: 1088 TRAGGLGLNLQSADTVIIYDTDWNPHADLQAQDRAHRIGQKKEVRVLRLISSGTVEELVL 1147 Query: 623 RWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE 682 L+ G+ + + L +T +D + + L L Sbjct: 1148 ARAQRKLEIDGKVIQAGKFDEVTTGAEYEALLQKAFETSAEEDNEETNELDDDELNELLA 1207 Query: 683 QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLI 716 +G + L + E+ + L Sbjct: 1208 RGDNELGIFTAMDNERKERKIAEWRASGSKGELP 1241 >UniRef50_Q5BN47 SPLAYED splice variant n=143 Tax=Eukaryota RepID=Q5BN47_ARATH Length = 3543 Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats. Identities = 108/678 (15%), Positives = 215/678 (31%), Gaps = 49/678 (7%) Query: 50 VTRVMFNPGDTITSHDGWQMQVEEV-KEENGLLTYIGTRLDTEESGVALREVFLDSKLVF 108 + ++ G D +V+++ KE L +G++L + + E D Sbjct: 644 LLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLKEAKLLTSRFENEADETRTS 703 Query: 109 SKPQDRLFAGQIDRMDRFALRYRA-------RKYSSEQFRMPYSGLRGQRTSLIPHQLNI 161 + D D D+ + E S L G + L Q+N Sbjct: 704 NATDDETLIENEDESDQAKHYLESNEKYYLMAHSIKENINEQPSSLVGGK--LREEQMNG 761 Query: 162 AHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVE 218 + + +LADE+GLGKT++ ++ + L++VP ++ W E Sbjct: 762 LRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSE 821 Query: 219 MLRR-FNLRFALFDDERYAEAQHDAYNPF-DTEQLVICSLDFARRSKQRLEHLCEAEWDL 276 + ++ ++ + +++ + ++ +K L + W Sbjct: 822 INFWAPSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLM-NKHDRPKLSKIHWHY 880 Query: 277 LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 +++DE H + ++A + ++ LLLT TP Q +E +A L L PN F Sbjct: 881 IIIDEGHRI---KNASCKLNADLKH--YVSSHRLLLTGTPLQNNLEELWALLNFLLPNIF 935 Query: 337 HDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDA 396 + F + + A + L + + + +L+ E+ Sbjct: 936 NSSEDFSQWFNKPFQSNGESSAEEALLSEEENLL--IINRLHQVLRPFVLRRLKHKVENE 993 Query: 397 QSARQELVSMLMDRHGTSRVLFRNTRNGVKGF---PKRELHTIKLPLPTQYQTAIKVSGI 453 + E + + ++L + + + R +H + L Sbjct: 994 LPEKIERLIRC-EASAYQKLLMKRVEDNLGSIGNAKSRAVHNSVMELRNICNHPY----- 1047 Query: 454 MGARKSAEDRARDMLYPERIYQEFEGD-NATWWNFDPRVEWLMGYLTSHR--SQKVLVIC 510 L+ E + ++E L L + +VL Sbjct: 1048 -----------LSQLHSEEVNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFS 1096 Query: 511 AKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEG 569 +E L + G + S +R F + + LL G G Sbjct: 1097 TMTRLLDVMEDYLTLK-GYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVG 1155 Query: 570 RNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGL 629 N Q A +++FD +NP + Q R RIGQ D+ + + + + L Sbjct: 1156 VNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKL 1215 Query: 630 DAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQH-EALKAQLEQGRDRL 688 + G ++ D YL S + ++ + L A+ E D Sbjct: 1216 GVANQSITAGFFDNNTSAEDRKEYLESLLRESKKEEDAPVLDDDALNDLIARRESEIDIF 1275 Query: 689 LEIHSNGGEKAQALAESI 706 I E ++ Sbjct: 1276 ESIDKQRKENEMETWNTL 1293 >UniRef50_B9EGQ8 SMARCA4 protein n=2 Tax=Euteleostomi RepID=B9EGQ8_HUMAN Length = 1681 Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats. Identities = 108/640 (16%), Positives = 213/640 (33%), Gaps = 28/640 (4%) Query: 93 SGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRT 152 + EV + +K G + R Y A ++ + S L Sbjct: 758 DSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGV 817 Query: 153 SLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAA-ERVLIIVPE 209 L +Q+ + + +LADE+GLGKTI+ ++ + LIIVP Sbjct: 818 -LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPL 876 Query: 210 TLQHQWLVEMLRRFNLRFAL-FDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEH 268 + W E + + + A +++ + ++ + K Sbjct: 877 STLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHI--- 933 Query: 269 LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 L + W ++VDE H + ++ + Q + P LLLT TP Q + +A L Sbjct: 934 LAKIRWKYMIVDEGHRM---KNHHCKLTQVLNT-HYVAPRRLLLTGTPLQNKLPELWALL 989 Query: 329 RLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQA 388 L P F + F + + L+ +E ++ + + LL+ Sbjct: 990 NFLLPTIFKSCSTFEQWFNAPFAMTGEKVD------LNEEETILIIRRLHKVLRPFLLRR 1043 Query: 389 ANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFP--KRELHTIKLPLPTQYQT 446 + E + E V D RVL+R+ + + K T T Sbjct: 1044 LKKEVEAQLPEKVEYVIKC-DMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNT 1102 Query: 447 AIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQ 504 +++ I + + + + + E L L R + Sbjct: 1103 IMQLRKICNHPYMFQHI-EESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNH 1161 Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCS 563 KVL+ C + +E R G + +R F E + LL + Sbjct: 1162 KVLLFCQMTSLMTIMEDYFAYR-GFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLST 1220 Query: 564 EIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVR 623 G G N Q A +++FD +NP Q R RIGQ +++++ + + ++ Sbjct: 1221 RAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILA 1280 Query: 624 WYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHE--ALKAQL 681 L+ + G S ++ +L + + E D+ + + A+ Sbjct: 1281 AAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARH 1340 Query: 682 EQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 E+ D + + + + + ++ L ++ + Sbjct: 1341 EEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIK 1380 >UniRef50_P51532 Transcription activator BRG1 n=64 Tax=Euteleostomi RepID=SMCA4_HUMAN Length = 1647 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 104/582 (17%), Positives = 196/582 (33%), Gaps = 26/582 (4%) Query: 93 SGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRT 152 + EV + +K G + R Y A ++ + S L Sbjct: 694 DSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGV 753 Query: 153 SLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAA-ERVLIIVPE 209 L +Q+ + + +LADE+GLGKTI+ ++ + LIIVP Sbjct: 754 -LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPL 812 Query: 210 TLQHQWLVEMLRRFNLRFAL-FDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEH 268 + W E + + + A +++ + ++ + K Sbjct: 813 STLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHI--- 869 Query: 269 LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 L + W ++VDE H + ++ + Q + P LLLT TP Q + +A L Sbjct: 870 LAKIRWKYMIVDEGHRM---KNHHCKLTQVLNT-HYVAPRRLLLTGTPLQNKLPELWALL 925 Query: 329 RLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQA 388 L P F + F + + L+ +E ++ + + LL+ Sbjct: 926 NFLLPTIFKSCSTFEQWFNAPFAMTGEKVD------LNEEETILIIRRLHKVLRPFLLRR 979 Query: 389 ANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG--VKGFPKRELHTIKLPLPTQYQT 446 + E + E V D RVL+R+ + + + K T T Sbjct: 980 LKKEVEAQLPEKVEYVIKC-DMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNT 1038 Query: 447 AIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQ 504 +++ I + + + + + E L L R + Sbjct: 1039 IMQLRKICNHPYMFQHI-EESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNH 1097 Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCS 563 KVL+ C + +E R G + +R F E + LL + Sbjct: 1098 KVLLFCQMTSLMTIMEDYFAYR-GFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLST 1156 Query: 564 EIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVR 623 G G N Q A +++FD +NP Q R RIGQ +++++ + + ++ Sbjct: 1157 RAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILA 1216 Query: 624 WYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDD 665 L+ + G S ++ +L + + E D+ Sbjct: 1217 AAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE 1258 >UniRef50_Q19106 Protein F01G4.1, confirmed by transcript evidence n=4 Tax=Fungi/Metazoa group RepID=Q19106_CAEEL Length = 1474 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 100/612 (16%), Positives = 205/612 (33%), Gaps = 44/612 (7%) Query: 154 LIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPET 210 L P+Q+ + + +LADE+GLGKTI+ ++ + L+IVP + Sbjct: 533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLS 592 Query: 211 LQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHL 269 W E + ++ ++ + A + + +++ + ++ + K L Sbjct: 593 TLSNWQNEFAKWAPSVTTIIYKGTKDARRRVEGQIRKGAFNVLMTTYEYVIKEKAL---L 649 Query: 270 CEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLR 329 + W +++DE H L ++ + + H LLLT TP Q + +A L Sbjct: 650 GKIRWKYMIIDEGHRL---KNHNCKLTLMLNGF-FHAQHRLLLTGTPLQNKLPELWALLN 705 Query: 330 LLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAA 389 L P+ F F + +L+ +E ++ + + LL+ Sbjct: 706 FLLPSIFSSCGTFEQWFNAPFATTGEKV------ELNQEETMLIIRRLHKVLRPFLLRRL 759 Query: 390 NSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGV-----KGFPKRELHTIKLPLPTQY 444 + E + E V D+ +V++R+ + G+ R L + L Sbjct: 760 KKEVESQLPDKTEYVIKC-DQSALQKVIYRHMQKGLLLDAKMSSGARSLMNTVVHLRKLC 818 Query: 445 QTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR-- 502 I + ++ E + ++E L L + Sbjct: 819 NHPFLFPNIEDSC-------------RAYWKVNEVNGTDLMRVAGKLELLDRILPKLKAT 865 Query: 503 SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLL 561 ++L+ + E L R ER F ++ +L Sbjct: 866 GHRILMFFQMTSMMNIFEDFLNFRR-YTYLRLDGSTKPDERGDLLTQFNAPNSDLFLFML 924 Query: 562 CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVL 621 + G G N Q A +++FD +NP Q R RIGQ ++++ + + + Sbjct: 925 STRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEEKI 984 Query: 622 VRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNC--REQHEALKA 679 + L+ E G+ S + L Q +G ++ + E + A Sbjct: 985 LAAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEQIIQADGEEEEEEEVPDDETVNQMVA 1044 Query: 680 QLEQGRDRLLEIHSN-GGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMI 738 + E+ + + + E+A L ++ FD + R + Sbjct: 1045 RSEEEFNIFQSMDIDRRREEANQLHRKPRLLEEHEIPDDILKLSFDYEEME-RAREEGRE 1103 Query: 739 VLTPSDHMLVPD 750 V+ + + Sbjct: 1104 VVDQTPNQRRRR 1115 >UniRef50_D2UX51 Chromodomain helicase DNA binding protein n=1 Tax=Naegleria gruberi RepID=D2UX51_NAEGR Length = 1800 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 104/595 (17%), Positives = 190/595 (31%), Gaps = 66/595 (11%) Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIE 186 R AR + ++ S L +QL + + +LADE+GLGKT++ Sbjct: 330 RIPARPAPHKFKKLEESPSFRDGNQLREYQLEGLNWLVFCWYQRRNSILADEMGLGKTVQ 389 Query: 187 AGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNP 245 L ++I P + W E ++ +F + + Sbjct: 390 TVATLEYLRAFEHIRGPFIVIAPLSTVEHWKREFENWTDMNVLVFHGNTQSREVMKNHEF 449 Query: 246 F---------------DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 F ++I + + L + W LVVDE H L ++ Sbjct: 450 FFKHPKTGNLIYHQKTYKFNVLITTYEIVMAESSY---LSKIPWQYLVVDEGHRL---KN 503 Query: 291 APSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR 350 S+ Q ++ + LLLT TP Q + F+ L+ LDP F+D F EE N Sbjct: 504 HNSKLAQILKNF--NAVHKLLLTGTPIQNNLTELFSLLQFLDPETFYDLDVFSEEYGNLG 561 Query: 351 PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDR 410 +++L L ++I + L + + E+V + + Sbjct: 562 ESG-------------SEKLEGLHKLISPYILRRLKEDVEKSIPPKEEIVVEVVPTSIQK 608 Query: 411 HGTSRVLFRNTRNGVKGFPKRE----LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARD 466 + RN +KG K + L+ + + L +SG Sbjct: 609 AYEQAIFKRNREFLMKGVSKSQNVPKLNNVLMELRKVCNHPFLISGAEENITRGMSDVEV 668 Query: 467 MLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLR 524 N ++ + L R KVL+ LE +R Sbjct: 669 --------------NEALIKSSSKMILVDKLLRKLREGGHKVLIFSQMVLVLNILEDYMR 714 Query: 525 EREGIRAAVFHEGMSIIERDRAAAWFAEED-TGAQVLLCSEIGSEGRNFQFASHMVMFDL 583 R + R +A F + + L+ ++ G G N A ++++D Sbjct: 715 YR-NFTYVRLDGTIKGSIRQQAIDRFNDPNIDTFVFLVSTKAGGVGINLTSADTVIIYDS 773 Query: 584 PFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIY 643 +NP Q R RIGQ +++I+ + T + + L + Sbjct: 774 DWNPQNDLQAQARCHRIGQTKEVKIYRLLTKNTKEKEIFERASMKLGLDRAVLSSNNEFV 833 Query: 644 DSVYNDLINYLASPDQTEGFD-----DLIKNCREQHEALKAQLEQGRDRLLEIHS 693 S + ++ E + E K +++ D ++E + Sbjct: 834 QSTSKSSTQNKPALEKEEIELLLRHGAYSAFKIDDTEEQKLLMDEDIDTIMERTA 888 >UniRef50_P51531 Probable global transcription activator SNF2L2 n=77 Tax=Coelomata RepID=SMCA2_HUMAN Length = 1590 Score = 527 bits (1357), Expect = e-147, Method: Composition-based stats. Identities = 103/638 (16%), Positives = 217/638 (34%), Gaps = 36/638 (5%) Query: 103 DSKLVFSKPQDRLFAGQIDRMDRFALRYRAR--------KYSSEQFRMPYSGLRGQRTSL 154 ++ + + + D D ++++Y AR ++ + S L +L Sbjct: 666 SEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALL-INGTL 724 Query: 155 IPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGA-AERVLIIVPETL 211 +QL + + +LADE+GLGKTI+ ++ + LIIVP + Sbjct: 725 KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST 784 Query: 212 QHQWLVEMLRRFNLRFAL-FDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLC 270 W E + + + +++ + ++ + K L Sbjct: 785 LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHI---LA 841 Query: 271 EAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRL 330 + W ++VDE H + ++ + Q + P +LLT TP Q + +A L Sbjct: 842 KIRWKYMIVDEGHRM---KNHHCKLTQVLNT-HYVAPRRILLTGTPLQNKLPELWALLNF 897 Query: 331 LDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAAN 390 L P F + F + + L+ +E ++ + + LL+ Sbjct: 898 LLPTIFKSCSTFEQWFNAPFAMTGERVD------LNEEETILIIRRLHKVLRPFLLRRLK 951 Query: 391 SDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG--VKGFPKRELHTIKLPLPTQYQTAI 448 + E + E V D ++L+R+ + + + K T T + Sbjct: 952 KEVESQLPEKVEYVIKC-DMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIM 1010 Query: 449 KVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKV 506 ++ I + + Y + A + + E L L R + +V Sbjct: 1011 QLRKICNHPYMFQHI-EESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRV 1069 Query: 507 LVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEI 565 L+ C + +E R +R F E + LL + Sbjct: 1070 LLFCQMTSLMTIMEDYFAFR-NFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRA 1128 Query: 566 GSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWY 625 G G N Q A +V+FD +NP Q R RIGQ +++++ + + ++ Sbjct: 1129 GGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAA 1188 Query: 626 HEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHE--ALKAQLEQ 683 L+ + G S ++ +L + + E ++ + + A+ E+ Sbjct: 1189 KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREE 1248 Query: 684 GRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 D + + + + + ++ L ++ + Sbjct: 1249 EFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIK 1286 >UniRef50_A8QEY4 BRM protein, putative n=3 Tax=Chromadorea RepID=A8QEY4_BRUMA Length = 1412 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 112/699 (16%), Positives = 239/699 (34%), Gaps = 41/699 (5%) Query: 56 NPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRL 115 +PG I S + + E+ + + + I + D E G+ + ++ + K ++ Sbjct: 491 HPGHEIVSREEYS-DSEDSEPDEPIPEPIEQKKDDEFEGM---DEETRNRKIIEKARNEE 546 Query: 116 FAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQR--TSLIPHQLNIAHDV--GRRHAP 171 + Y E+ +S L G L P+QL + + Sbjct: 547 DEYDQKNRRQMESYYATAHKIKEKIVTQHSSLGGGNQALQLKPYQLKGLEWMVSLYNNNL 606 Query: 172 RVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFNLRFA-- 228 +LADE+GLGKTI+ ++ + LIIVP + W +E+ + Sbjct: 607 NGILADEMGLGKTIQTIALVTYLMEVKKLNGPYLIIVPLSTIANWSLELEKW-APHVVSI 665 Query: 229 LFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 ++ + A + +A + +++ + D+ + K L + W +++DE H + Sbjct: 666 VYKGNKEARKKLEASIRRNAFNVLLTTYDYVLKEKGL---LGKIRWKYMIIDEGHRM--- 719 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 ++ + + LLLT TP Q + +A L L P+ F F + Sbjct: 720 KNHNCKLTLVLNGYFS-AQHRLLLTGTPLQNKLPELWALLNFLLPSIFSSCGTFEQWFNA 778 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM 408 +L+ +E ++ + + LL+ + E + E V Sbjct: 779 PFATTGEKV------ELNQEETMLIIRRLHKVLRPFLLRRLKKEVESQLPEKTEYVIKC- 831 Query: 409 DRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDML 468 D R+L+++ + G+ + + T + + + E+ + Sbjct: 832 DMSALQRILYQHMQKGL------LIDSKHAGGRALMNTVVHLRKLCNHPFLFENVEDEC- 884 Query: 469 YPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLRER 526 ++ + + + E L L + ++L+ C + +E L R Sbjct: 885 --REFWKVPDVSGKDLYRVSGKFELLDRVLPKLKASGHRILMFCQMTSLMTIMEDYLNYR 942 Query: 527 EGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPF 585 E + ER + + ++ +L + G G N Q A +++FD + Sbjct: 943 E-FKYLRLDGSTKPDERGQLLELYNAPNSEYFIFMLSTRAGGLGLNLQTADTVIIFDSDW 1001 Query: 586 NPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDS 645 NP Q R RIGQ+ ++++ + + ++ L+ E G+ S Sbjct: 1002 NPHQDMQAQDRAHRIGQSREVRVLRLVTVNSIEEKILAAARYKLNVDEKVIQAGKFDQRS 1061 Query: 646 VYNDLINYLASPDQTEGFDDLIKNCREQHE--ALKAQLEQGRDRLLEIHSNGGEKAQALA 703 + L + E DD + + A+ E D + + A Sbjct: 1062 TGAERRQMLEQIIRAESEDDDEDEVPDDETINQMVARSEDEFDLFQRMDIERRRQEAAEY 1121 Query: 704 ESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTP 742 +D+ + + + + + + P Sbjct: 1122 RRKPRLIEDSEIPEGIVKASQHFIDEEKEPQKSKLAFEP 1160 >UniRef50_C4V724 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V724_NOSCE Length = 1262 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 115/696 (16%), Positives = 230/696 (33%), Gaps = 57/696 (8%) Query: 59 DTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAG 118 D I D +V VK + + E L +DR Sbjct: 235 DRIIHEDFRNGKVYLVKWKKLAYELSTEEKIDDVCKCEGFEEELKKY------RDRK--- 285 Query: 119 QIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLA 176 +I M R+ + P + L +QL + + R ++A Sbjct: 286 KIRVMRHGLEWRPPRELQIKFEESP---VFKGDNKLREYQLEGLNWLLNRWYHKISCIMA 342 Query: 177 DEVGLGKTIEAGMILHQQLLS-GAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY 235 DE+GLGKT+++ + ++ VLI+ P + W E +LR ++ Sbjct: 343 DEMGLGKTVQSVVFVNSLFTKFNYNGPVLIVAPLSTLVHWEREFFAWTDLRVLIYHGSIQ 402 Query: 236 AEAQHDAYNPFDT--------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 Y + ++I + + +H+ + W + + DEAH L Sbjct: 403 GRNMIAEYEFYLKSATNKVGLFDVMITTYEMIM---AGFDHISQFNWAVGIFDEAHRL-- 457 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQK 347 ++A S+ + + + +LL+ TP Q + ++ L + P+ F+D A+F+ + K Sbjct: 458 -KNASSKAASTLRNV--NFSHKVLLSGTPLQNNITELWSLLNFISPSEFNDSAKFLSDYK 514 Query: 348 -NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSM 406 + + LL L + ++ + +++ ++ ++ ++ + Sbjct: 515 LEQAADVEKLQGLLRPLMLRRMKEDVEKTIPMKEETIIEVELTMIQKRYYRAILEKNLDF 574 Query: 407 LMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQT----AIKVSGIMGARKSAED 462 L H S N N + K +H + + K + A Sbjct: 575 LTKGHKDS---APNLLNAMMELRKCCIHPYLIKGAEEKIIGDFVKRKKKEAVDAPVVETG 631 Query: 463 RARDMLYPERI-----------YQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ-KVLVIC 510 ++ +P I + + ++ L L KVL+ Sbjct: 632 DFSELSFPSNINAQKIVIANNIVTDIDEYYKILIQSSGKLVLLDKLLNKLYGHHKVLIFS 691 Query: 511 AKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTG-AQVLLCSEIGSEG 569 L + L ++ + G+ R A F++ ++ LLC+ G G Sbjct: 692 QMTKCLDLLGEYLAYKK-YKFERIDGGVRGDHRQAAIDRFSDANSDGFVFLLCTRAGGVG 750 Query: 570 RNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGL 629 N A +++FD +NP Q R RIGQ ++++I+ T + + L Sbjct: 751 INLTAADTVIIFDSDWNPQNDLQAQARCHRIGQTNEVKIYRLVTRNTYEREMFDKAGMKL 810 Query: 630 DAFEHTCP----TGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGR 685 G D I L + + ++ E Q+ + R Sbjct: 811 GLDRAVLQKMTFEGHKNEKVKKKDAIEMLLRKGAYGVLMETDEASKKFCEEDIDQILERR 870 Query: 686 DRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 ++++ G ++A + EE DD Sbjct: 871 TKVIKHSDGGNVFSKASFQVDEEIDDPDFWDNLLNK 906 >UniRef50_C4LZC7 Chromodomain-helicase-DNA-binding protein, putative n=2 Tax=Entamoeba RepID=C4LZC7_ENTHI Length = 1641 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 89/628 (14%), Positives = 192/628 (30%), Gaps = 77/628 (12%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQL-LSGAAERV 203 +L +Q+ + + +LADE+GLGKT++ Sbjct: 642 PYRHDNTLRSYQMEGLNWLVFNWCRGKGCILADEMGLGKTVQVVAFFEHLRSFQKLPGPF 701 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD------------TEQL 251 L++ P + W E+ ++ ++ + Y F Sbjct: 702 LVVTPLSTLEHWRREINEWTDMNVVVYLGTKENRQLIQHYEWFYLNKDEKEISKQIKFHA 761 Query: 252 VICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLL 311 +I + + E L + W + VVDEA L ++ S+ + + ++ +L Sbjct: 762 LITTYEMIMSD---YEILSQIHWQVTVVDEAQRL---KNKSSKLNKTLTEIP--SYHKIL 813 Query: 312 LTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELN 371 LT TP Q ++ + L ++P F F E+ + + A Sbjct: 814 LTGTPIQNNIDELWTLLNFINPENFPSLENFHEKFGDAKTADGVKA-------------- 859 Query: 372 MLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKR 431 + + LL+ + E + ++E++ ++ + +R + + F + Sbjct: 860 -----LQTEIQPYLLRRVKGNVEKSIPPKEEILIE-VELTLVQKKYYRALYDKNREFLNK 913 Query: 432 --------ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNAT 483 L + + L + G+ + D Sbjct: 914 GCVGSNVPHLQNLMIQLRKVCNHPFLIPGVEEKEIANPDDPESYAQE------------- 960 Query: 484 WWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSII 541 ++ L L KVL+ LE+ L ++ + Sbjct: 961 LIKSSGKMVLLDKLLPKLNADGHKVLIFSQLKGVLDILEKYLSYKK-YTYERLDGSVRSN 1019 Query: 542 ERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 +R A F + + LLC+ G G N A ++++D +NP Q R RIG Sbjct: 1020 DRQNAIDRFMKGER-FVFLLCTRAGGIGINLSEADTVIIYDSDWNPQNDLQAQARCHRIG 1078 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 Q +++++ + T + + L + V + + Sbjct: 1079 QKKEVKVYRLVSKNTYERYMFERASMKLGLDQAILSNINNTPGEVNKESEKLSKEDITSL 1138 Query: 662 GFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 ++ + E+ D+++E + ++ + + D +F+ Sbjct: 1139 LKYGAYGLLKDDDDKDNNFCEEDIDQIME---------KRTSKVVWKGDQVAASSSFSKA 1189 Query: 722 LFDIIGINQDDRGDNMIVLTPSDHMLVP 749 F + D D + P Sbjct: 1190 TFVSETGDVIDLNDEHFWEKVLPKLRTP 1217 >UniRef50_UPI00016E4BB0 UPI00016E4BB0 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E4BB0 Length = 2002 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 101/608 (16%), Positives = 187/608 (30%), Gaps = 51/608 (8%) Query: 166 GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNL 225 +LADE+GLGKTI++ L + L L+I P + W E L Sbjct: 4 VFLSRRNCILADEMGLGKTIQSITFLFEMYLKAIEGPFLVIAPLSTIPNWEREFRTWTEL 63 Query: 226 RFALFDDERYAEAQHDAYNPFDT------------EQLVICSLDFARRSKQRLEHLCEAE 273 ++ + + AY + VI + + L Sbjct: 64 NVVVYHGSQASRKTIQAYEMYYRDTQGKIIKGVYRFHAVITTFEMILADCPE---LRSVP 120 Query: 274 WDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDP 333 W +V+DEAH L ++ + + ++ + + +LLT TP Q +E F+ L L+P Sbjct: 121 WRCVVIDEAHRL---KNRNCKLLEGLKMM--DMEHKVLLTGTPLQNTVEELFSLLNFLEP 175 Query: 334 NRFHDFAQFVEEQKNYR--PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANS 391 RF F+ E + + + +L L + ++ + +++ ++ N Sbjct: 176 ERFPSEQTFMTEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNI 235 Query: 392 DSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVS 451 + ++ ++ S L + N L + L ++ Sbjct: 236 QKKYYRAILEKNFSFLSKGGSGGGGGGSSVPN---------LLNTMMELRKCCNHPYLIN 286 Query: 452 GIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVI 509 G P+ Q + ++ + L + +VLV Sbjct: 287 GAEEKIAEEFRDTHGTDVPDMPLQAM-------IHASGKLVLIDKLLPKLKAGGHRVLVF 339 Query: 510 CAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSE 568 LE L + + R A F+ D+ LLC+ G Sbjct: 340 SQMVRCLDILEDYLINKR-YPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGL 398 Query: 569 GRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEG 628 G N A ++FD +NP Q R RIGQ+ ++I+ + + + Sbjct: 399 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLK 458 Query: 629 LDAFEHTCPTGRTIY------DSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE 682 L + + + I L D + E Q+ Sbjct: 459 LGLDKAVLQSMSGRENANSGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQIL 518 Query: 683 QGRDRLLEIHSNGGEKAQALAESIE---EQDDDTNLIAFAMNLFDIIGINQDDRGDNMIV 739 Q R + I S G A A + D F ++ D + Sbjct: 519 QRRTHTITIESEGKGSTFAKASFVATGNRTDISLEDPDFWQKWAKKAELDLDAINGRNTL 578 Query: 740 LTPSDHML 747 + + + Sbjct: 579 VIDTPRVR 586 >UniRef50_P32597 Nuclear protein STH1/NPS1 n=21 Tax=Saccharomycetales RepID=STH1_YEAST Length = 1359 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 103/624 (16%), Positives = 203/624 (32%), Gaps = 32/624 (5%) Query: 120 IDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLAD 177 D Y E+ S L G +L +QL + + +LAD Sbjct: 438 TDEEREKTDYYEVAHRIKEKIDKQPSILVGG--TLKEYQLRGLEWMVSLYNNHLNGILAD 495 Query: 178 EVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERY 235 E+GLGKTI++ ++ L+IVP + W +E + +L ++ Sbjct: 496 EMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPN 555 Query: 236 AEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 +++ + ++ + K L + +W +++DE H + ++A S+ Sbjct: 556 QRHSLQHQIRVGNFDVLLTTYEYIIKDKSL---LSKHDWAHMIIDEGHRM---KNAQSKL 609 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 I L+LT TP Q + +A L + P F+ F + Sbjct: 610 SFTISHY-YRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGT 668 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR 415 L + + + L +++ LL+ + E + E V G + Sbjct: 669 QEKLELTEEETLLIIRRLHKVLR----PFLLRRLKKEVEKDLPDKVEKVIKC-KLSGLQQ 723 Query: 416 VLFRNTRNGVKGFPKRELHTIKLPLPTQYQ-TAIKVSGIMGARKSAEDRARDMLYPERIY 474 L++ F +++ I ++ E + Sbjct: 724 QLYQQMLKHNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFDEV-------EGVV 776 Query: 475 QEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAA 532 G++ + + E L L + +VL+ +E LR ++ ++ Sbjct: 777 NPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKD-LKYM 835 Query: 533 VFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLE 591 ER F D+ LL + G G N Q A +++FD +NP Sbjct: 836 RLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDL 895 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI 651 Q R RIGQ ++++I + + V++ + LD G+ S + Sbjct: 896 QAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQE 955 Query: 652 NYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQD- 710 +L ++E D + L L + D + E+ + Q Sbjct: 956 AFLRRLIESETNRDDDDKAELDDDELNDTLARSADEKILFDKIDKERMNQERADAKAQGL 1015 Query: 711 -DDTNLIAFAMNLFDIIGINQDDR 733 + L + + ++ Sbjct: 1016 RVPPPRLIQLDELPKVFREDIEEH 1039 >UniRef50_D1HST8 Whole genome shotgun sequence of line PN40024, scaffold_9.assembly12x (Fragment) n=3 Tax=Magnoliophyta RepID=D1HST8_VITVI Length = 1539 Score = 524 bits (1349), Expect = e-147, Method: Composition-based stats. Identities = 130/784 (16%), Positives = 259/784 (33%), Gaps = 91/784 (11%) Query: 67 WQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSK----LVFSKPQDRLFAGQIDR 122 +M ++ +K+ + + I R+ E SG + E + + + +D A D Sbjct: 318 KEMDLDLIKQNSQVERIIAYRIGKEGSGDVMPEYLVKWQGLSYAEATWEKDVDIAFAQDA 377 Query: 123 MDRFALRYRARKYSS--------------EQFRMPYSGLRGQRTSLIPHQLNIAHDVGRR 168 +D + R A + L+G L +QL + + Sbjct: 378 IDEYKAREAAAAIQGKMVDMQRKKSKASLRKLDEQPGWLKGG--QLRDYQLEGLNFLVNS 435 Query: 169 HAP--RVLLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPETLQHQWLVEMLRR-FN 224 V+LADE+GLGKT+++ +L L++VP + W E + + Sbjct: 436 WRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIYGPFLVVVPLSTLSNWAKEFKKWLPD 495 Query: 225 LRFALFDDERYAEAQHDAYNPFDT--------EQLVICSLDFARRSKQRLEHLCEAEWDL 276 L ++ R + Y + ++ + + + K L + +W+ Sbjct: 496 LNVIVYVGTRASREVCQQYEFYTNKKTGRTILFNALLTTYEVVLKDKAV---LSKIKWNY 552 Query: 277 LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 L+VDEAH L +++ ++ Y + + + LL+T TP Q +E +A L LDP++F Sbjct: 553 LMVDEAHRL---KNSEAQLYTTLSEFS--AKNKLLITGTPLQNSVEELWALLHFLDPDKF 607 Query: 337 HDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDA 396 + FV+ KN + L + ++ ++ E+ + P ++ + Sbjct: 608 KNKDDFVQNYKNLSSFNEMELANLHMELRPHILRRVIKDV--EKSLPPKIERILRV--EM 663 Query: 397 QSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGA 456 +++ +++R+ F + GV+G + L I + L Sbjct: 664 SPLQKQYYKWILERN------FHDLNKGVRG-NQVSLLNIVVELKKCCNHPFLFESADHG 716 Query: 457 RKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAA 514 G ++ L L + +VL+ Sbjct: 717 YGGNRSTNDC------------GKLERLILSSGKLVLLDKLLEKLHETNHRVLIFSQMVR 764 Query: 515 TALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQ 573 L + + R G + R +A F + LL + G G N Sbjct: 765 MLDILAEYMSLR-GFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLA 823 Query: 574 FASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFE 633 A +++FD +NP Q + R RIGQ + I+ K+ + +++ + + Sbjct: 824 TADTVIIFDSDWNPQNDLQAMSRAHRIGQREVVNIYRFVTSKSVEENILKRAKQKMVLDH 883 Query: 634 HTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHS 693 L + ++L R E L + + + + S Sbjct: 884 LVIQKLNA-----EGRLEKKESKKGSYFDKNELSAILRFGAEELFKEDKNEEESKKRLLS 938 Query: 694 NGGEKAQALAESIEEQDDDTNLIAFAMNL-FDIIGINQDDRGDNMIVLTP-----SDHML 747 ++ AE +EE++ G +DD + P ++ L Sbjct: 939 MDIDEILERAEKVEEKETGEEGNELLSAFKVANFGSAEDDGSFWSRWIKPEAVAEAEDAL 998 Query: 748 VPDF-------------PGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSG 794 P +S+ +E A R A ++ P I + Sbjct: 999 APRAARNTKSYAEANQPERISKRKKKAAEPQERAQKRRKADYLVHLVPRIEGAAAQVRGW 1058 Query: 795 DTGS 798 G+ Sbjct: 1059 SYGN 1062 >UniRef50_D0NZU0 Chromatin structure-remodeling complex subunit snf21-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NZU0_PHYIN Length = 1309 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 116/699 (16%), Positives = 230/699 (32%), Gaps = 39/699 (5%) Query: 80 LLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQ 139 LL+ + LD+ V + ++ D G D + + Sbjct: 410 LLSQTNSYLDSIRKLVRQHKKKHHVVDEYTAHYDAHHDGSKDTNADDLDDDLNYLEIASK 469 Query: 140 FRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLL- 196 +P L L +QL + + +LADE+GLGKTI++ +L Sbjct: 470 GELPRQPLMLVGGDLKEYQLRGLQWMVSLYDNHLNGILADEMGLGKTIQSISLLTYVTEV 529 Query: 197 SGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFD-TEQLVIC 254 L++VP + W+ E + +L ++ + +++ Sbjct: 530 KHNHGPFLVVVPLSTLSNWVNEFKKWAPDLVLVVYKGPPQVRKELHKQEMASCQFNVLLT 589 Query: 255 SLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTA 314 + ++ + K L + +W ++VDE H + ++A S+ + + LLLT Sbjct: 590 TYEYIMKDKHV---LRKYDWQYIIVDEGHRM---KNAQSKFAMTLGSM-YTSRNRLLLTG 642 Query: 315 TPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLG 374 TP Q + +A L L P F F + N+LS++E ++ Sbjct: 643 TPLQNSLPELWALLNFLLPTIFESVDTFEQWFSKPFAQFSGNGDS---NELSDEERMLII 699 Query: 375 EMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELH 434 + + LL+ + D + E V + G ++++R + G + Sbjct: 700 NRLHQVLRPFLLRRVKASVLDQLPDKVEKVLKC-ELSGWQKIMYRRIQEGGALLMETTDD 758 Query: 435 TIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWL 494 + K +Y + + +M RK +P + + E L Sbjct: 759 SGKKKGKAKYTSKGLSNVLMQLRKV-------CNHPYLFQTNGYQIDFDIVRSSGKFELL 811 Query: 495 MGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAE 552 L + +VL+ LE R G R S ER++ F Sbjct: 812 DRMLPKLKAAGHRVLMFSQMTQLMHVLEDYFNYR-GFRYLRLDGSTSADEREQRMFMFNA 870 Query: 553 EDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVP 611 D+ LL + G G N A +++FD +NP + Q R RIGQ +++++ Sbjct: 871 SDSPFFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRL 930 Query: 612 YLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCR 671 + ++ + ++ G+ S + L S + E ++ Sbjct: 931 VTNSPVEEKILSRATDKMNMNNLVVEAGKFNNKSKEAERRAMLESLIKME-QEEAAHAAH 989 Query: 672 EQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQD 731 E+ L+ + ++ + L + + ++ + Sbjct: 990 GDDESSNVLLDDEINEMMALTDEELALYHRLDDERKARESKE-----WGEYCKQYNVPYS 1044 Query: 732 DRG------DNMIVLTPSDHMLVPDFPGLSEDGITITFD 764 R D L ++ ++ D D FD Sbjct: 1045 PRSRLMAEKDAPAWLREANDVMEHDIATGKHDKDAWNFD 1083 >UniRef50_D0NGD8 Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NGD8_PHYIN Length = 744 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 105/605 (17%), Positives = 196/605 (32%), Gaps = 39/605 (6%) Query: 127 ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKT 184 R+ + L G +L +QL + + +LADE+GLGKT Sbjct: 128 DASLDTRQQPQKVEFEQPKLLTGG--TLRDYQLEGIRWLCNLFENGLNGILADEMGLGKT 185 Query: 185 IEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEA--QHD 241 I+ +L G LI+ P + W E + ++ ++ + + + Sbjct: 186 IQVIGLLAHLKALGVRGPHLIVAPLSTLMNWANEFRKWAPSMPVVIYHGTKQERKEMRKN 245 Query: 242 AYNPFDT----EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQ 297 A N +VI S + + W +V+DE H L ++ + + Sbjct: 246 ALNRKKKSDVNFPVVISSYEVMISDARAF-FSSGFVWKYMVIDEGHRL---KNMDCKLVR 301 Query: 298 AIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN----YRPVA 353 +++ LLLT TP Q + ++ L + P+ F D F A Sbjct: 302 ELKR--GRSENRLLLTGTPLQNNLTELWSLLNFILPDVFDDLELFESWFSFTPDAVATAA 359 Query: 354 DAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGT 413 + A + L ++ + + E LL+ D + ++ E+ + Sbjct: 360 ATGESVAAQDVLQGEKKVEVIGKLHEILRPFLLRRLKVDVVEEMVSKTEIF-VYCSMTPM 418 Query: 414 SRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERI 473 R ++ R+G E K + T + +M RK Sbjct: 419 QREYYQMIRDG-TLAKAMEEKYGKFQAQKAFNTTTLRNKMMQLRKCCLHPYL--FDEPLT 475 Query: 474 YQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRA 531 + ++ L L + KVL+ LE R RE Sbjct: 476 AGGDVVTDERMIETSGKLSILDRMLRQLKRKGHKVLIFSQMTRMMDILEDYFRMRE-YSY 534 Query: 532 AVFHEGMSIIERDRAAAWFA----------EEDTGAQVLLCSEIGSEGRNFQFASHMVMF 581 +++R F ++D +L + G G N A ++ + Sbjct: 535 CRLDGSTKLMDRVDQMEKFNKVSAGSGSANDDDNVFVFMLSTRAGGLGINLIAADTVIFY 594 Query: 582 DLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT 641 D +NP Q + R RIGQ ++I ++ E + + + + E G Sbjct: 595 DSDWNPQQDNQAMDRCHRIGQKNEIIVYRLVTENSFEDRMTQRAFEKRKLERVVIQRGGF 654 Query: 642 IYDSVYNDLINYLASPDQTEGFDDL-IKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 + + + + DD+ I+ E +L Q DR L + S + Sbjct: 655 KERTTPAESAKLTNTELEDLLRDDVEIRQGVESGGITDDELNQILDRELVVKSFVKTSKE 714 Query: 701 ALAES 705 A++ Sbjct: 715 ENAKA 719 >UniRef50_O14647 Chromodomain-helicase-DNA-binding protein 2 n=196 Tax=Deuterostomia RepID=CHD2_HUMAN Length = 1828 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 101/597 (16%), Positives = 195/597 (32%), Gaps = 56/597 (9%) Query: 133 RKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMI 190 ++ + + L G+ L +QL + + V+LADE+GLGKTI+ Sbjct: 463 QRPRFVALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISF 522 Query: 191 LHQQLLSG-AAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFD- 247 L LI+VP + W E + ++ + + Y Sbjct: 523 LSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHS 582 Query: 248 -----TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 +I + + + K L W L VDEAH L ++ S Y+ + + Sbjct: 583 QTKRLKFNALITTYEILLKDKTV---LGSINWAFLGVDEAHRL---KNDDSLLYKTL--I 634 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVA-DAVAMLLA 361 LL+T TP Q ++ ++ L + P +F + F E+ R ++ +L Sbjct: 635 DFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLE 694 Query: 362 GNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT 421 L + ++ + + + ++ + +++ ++ R+ + L + T Sbjct: 695 PFLLRRVKKDVEKSLPAKVEQILRVE--------MSALQKQYYKWILTRNY--KALAKGT 744 Query: 422 RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDN 481 R GF I + L + E + + Sbjct: 745 RGSTSGFL-----NIVMELKKCCNHCYLIK----------------PPEENERENGQEIL 783 Query: 482 ATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMS 539 + ++ L LT R +VL+ L + L + + Sbjct: 784 LSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKH-YPFQRLDGSIK 842 Query: 540 IIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 R +A F + + LL + G G N A +V+FD +NP Q R Sbjct: 843 GEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH 902 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ + I+ + T + ++ + + T ++ + N S Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTILEN--NSGRSNS 960 Query: 659 QTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 ++L + E L +LE E+ + + E+ L Sbjct: 961 NPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDEL 1017 >UniRef50_A9T545 SNF2 family chromodomain-helicase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T545_PHYPA Length = 1791 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 109/643 (16%), Positives = 211/643 (32%), Gaps = 59/643 (9%) Query: 154 LIPHQLNIAHDVGRR--HAPRVLLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPET 210 L +Q + + +LADE+GLGKTI++ +L L+IVP + Sbjct: 725 LRNYQEEGVTWLDHNFENRTNCVLADEMGLGKTIQSVAMLETLRCKRNLRGPFLVIVPVS 784 Query: 211 LQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNP-------FDTEQLVICSLDFARRSK 263 W E+ ++ ++ + Y +++ S + R + Sbjct: 785 TLGHWQREIESLTDMNCIVYSGTQDDRDIIRQYEFNFASNSKALKFNVLLTSFEMLMRDQ 844 Query: 264 QRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMES 323 L + W ++VDEAH L + S+ QA+ QL G+LLLT TP Q + Sbjct: 845 N---KLAKETWQYIIVDEAHRL---KSRVSKTTQALRQLKVRKGGLLLLTGTPVQNNTKE 898 Query: 324 HFARLRLLDPNRFHDFAQFVEEQ---KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 F+ L LLDP +F+ F+E+ ++ + D +L L + ++ + ++ Sbjct: 899 IFSLLNLLDPEKFNSEEDFLEKYGEIEDAEQIKDLQENILRPRLLRRMKEDVEKSIPQKE 958 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPL 440 + ++ ++ + V+ L+ TS + L + + L Sbjct: 959 ETIVWVELTKDQRLFYKAILENNVASLLKGSSTSNL--------------PNLRNVAMEL 1004 Query: 441 PTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS 500 G+ + + + N ++ + L Sbjct: 1005 RKVCNHPFLCDGLEDSLTAK---------LRSNANDSNASGNLLQNSSGKMILVDKLLPK 1055 Query: 501 HR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ 558 + ++VL+ LE + + G + ER A ++ +D+ Sbjct: 1056 LKDAGRRVLIFSQFTIMLDLLEDYMIMK-GYSYERIDGKIRGSERQAAIDRYSAKDSDIF 1114 Query: 559 -VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTA 617 LL + G G A +++D +NP Q + R RIGQ D++I+ T Sbjct: 1115 VFLLSTRAGGLGITLTAADTCIIYDSDWNPQNDLQAMARCHRIGQTKDVKIYRLITRNTY 1174 Query: 618 QSVLVRWYHEGLDAFEHTCPT--GRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHE 675 + L E G + + + L D + E + Sbjct: 1175 EERLFECSSRKYGLDEAILGNRVGADVNLDHDKHIESLLKHGAYDIMKDGGDEAAAEFNA 1234 Query: 676 ALKAQLEQGRDRLLEI-----HSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQ 730 Q+ + R + +I ++ + E + + + F L Sbjct: 1235 QDIDQILEQRTQQRQIGGRGNNTFSVATFKTNPEVDAVAESEQDSKCFWQGLMPEA---C 1291 Query: 731 DDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALARED 773 D I + + + RE A + ED Sbjct: 1292 DRTMAEAIAAEVPTDLHPGGLRKRTRGRVNY---RENARSLED 1331 >UniRef50_Q12873 Chromodomain-helicase-DNA-binding protein 3 n=105 Tax=Eumetazoa RepID=CHD3_HUMAN Length = 2000 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 107/648 (16%), Positives = 201/648 (31%), Gaps = 73/648 (11%) Query: 143 PYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLLSGA- 199 + +L +QL + + A +LADE+GLGKTI+ + L+ G Sbjct: 725 QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 784 Query: 200 AERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFD----------- 247 L+ P + W E + ++ + A Sbjct: 785 KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKA 844 Query: 248 ---------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA 298 +++ S + + L W LVVDEAH L ++ S+ ++ Sbjct: 845 FKMKREAQVKFHVLLTSYELITIDQA---ALGSIRWACLVVDEAHRL---KNNQSKFFRV 898 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY--RPVADAV 356 + + LLLT TP Q +E F L L P RF++ F+EE + + Sbjct: 899 LN--GYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKL 956 Query: 357 AMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRV 416 LL + L + ++ M + ++ ++ + + + L Sbjct: 957 HDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEAL--------- 1007 Query: 417 LFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQE 476 N G + L I + L Sbjct: 1008 ------NSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAM--------------ESPKLPS 1047 Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVF 534 + ++ L L + +VL+ LE L EG + Sbjct: 1048 GAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDY-EGYKYERI 1106 Query: 535 HEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQR 593 G++ R A F LL + G G N A +++FD +NP Q Sbjct: 1107 DGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQA 1166 Query: 594 IGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC--PTGRTIYDSVYNDLI 651 R RIGQA+ + I+ + + + + + G +L Sbjct: 1167 FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELD 1226 Query: 652 NYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDD 711 + L + D+ +E+ ++ + RLL+ + + E +++ E Sbjct: 1227 DILKFGTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQDATEDTD--VQNMNEYLS 1284 Query: 712 DTNLIAFAMNLFDIIGINQDDRGDNMIVLTP--SDHMLVPDFPGLSED 757 + + + D I + + + P + +L + ED Sbjct: 1285 SFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQED 1332 >UniRef50_A2FI37 SNF2 family N-terminal domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2FI37_TRIVA Length = 1612 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 115/647 (17%), Positives = 212/647 (32%), Gaps = 49/647 (7%) Query: 108 FSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQ--RTSLIPHQLNIAHDV 165 ++ L A + R R P + + L +Q++ + + Sbjct: 188 IPDFENALKAYKKRRSHENMKRISDAIQRPSGTFTPLKTMSKADDGSELRDYQIDGVNWL 247 Query: 166 GRRH--APRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRR 222 + +LADE+GLGKT++ M L + + L+I P + QW E + Sbjct: 248 LYCYYEHRNSILADEMGLGKTVQIVMTLKKISEITKINGPFLVISPLSTLQQWRREFEKW 307 Query: 223 FNLRFALFDDERYAEAQHDAYNPFDT--------EQLVICSLDFARRSKQRLEHLCEAEW 274 +L +F + + + ++I + + E EW Sbjct: 308 SDLNTVVFHGKPASREVILNFEFTTDDESENKVGFDVLITNYETFTSE---FESFKPIEW 364 Query: 275 DLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN 334 LV+DE H L ++ + YQ + QL LLT TP Q +E ++ L LL P Sbjct: 365 RYLVLDEGHRL---KNHTGKCYQLLTQLT--FEHCTLLTGTPIQNNVEELWSLLHLLHPK 419 Query: 335 RFHDFAQFVEEQKNYRPVA--DAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD 392 F D +F+E+ + + A+ L+ L + ++ + ++ ++ Sbjct: 420 EFEDLPEFLEQFGHIDDINTLQALQELIQPYILRRRKNDVEATLTKLEETIIEVELTRIQ 479 Query: 393 SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSG 452 + + E S+LM + G L + + L + G Sbjct: 480 KQYYTTLLHENASVLMQ--------------QITGGSLPSLQNLMMQLRKVCNHPYLIKG 525 Query: 453 IMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVIC 510 + + I ++ L L KVL+ Sbjct: 526 ASEFIEKMIREKLSQASEDEI------QLQALIESSGKMILLDKLLPKLHQEGHKVLIFS 579 Query: 511 AKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGR 570 +E L +++ I + ER+ A F + LLC+ G G Sbjct: 580 QMVKVLDIIEDYLIKKD-IDCERIDGNVPEPERNAAIDRFVNNENCYIFLLCTRAGGVGI 638 Query: 571 NFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLD 630 N A ++++D +NP Q R RIGQ ++++ T + ++ + L Sbjct: 639 NLTAADTVIIYDSDWNPQNDIQAQSRCHRIGQTQKVKVYRLVTRGTYELEMLDRASKKLG 698 Query: 631 AFEHTCPTGR-TIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGR--DR 687 G D V I L D + A Q+ R +R Sbjct: 699 LDHALLDGGEIGKSDPVQATEIEKLLRHGAYNITHDDDSETDKFVAADIDQILGSRTTER 758 Query: 688 LLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRG 734 ++ SN + + Q+D+ N F N+ ++R Sbjct: 759 THDLSSNSFFSKKQFFSENKSQEDEINAADFWQNILPAEQEILEERR 805 >UniRef50_D2VNB4 Helicase-like protein n=1 Tax=Naegleria gruberi RepID=D2VNB4_NAEGR Length = 745 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 106/594 (17%), Positives = 200/594 (33%), Gaps = 54/594 (9%) Query: 136 SSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQ 193 + L G T+L +QL + + + +LADE+GLGKTI+ + Sbjct: 183 QAALKYSQPKYLSG--TTLRDYQLKGVNWLISLYENGVNGILADEMGLGKTIQTIGLFCH 240 Query: 194 QLLSGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPF----DT 248 G L++ P + W+ E+ + ++ L+ + A A N Sbjct: 241 LYEKGIKGPFLVVAPLSTVSNWVNEIDKWAPDIGCVLYHGNKDDRAIIRAKNFSKVKKGQ 300 Query: 249 EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPG 308 +V+ S + R K+ L + + W +VVDEAH L ++ R + ++ + Sbjct: 301 IAVVVSSYEIVMRDKKFLAN--KFNWKYIVVDEAHRL---KNFNCRLTRELKTYS--SEN 353 Query: 309 VLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSND 368 LLLT TP Q + ++ L L P+ F D + F + + N + Sbjct: 354 RLLLTGTPLQNNLSELWSLLNFLLPSIFDDLSAFNKWFDFTKK---------EKNDYITN 404 Query: 369 ELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR------ 422 E L + LL+ SD + ++E + + + + Sbjct: 405 EKTQLISKLHNILRPFLLRRLKSDVDIGIPKKREFLIYTH-MTDMQKEYYNAVKSKDLLP 463 Query: 423 --NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD 480 K L + + + + +E + E Sbjct: 464 IFKDQKRANSTTLLNLLMQMRKICNHPFLLREFETKDSESESASNKRFLKEC-------- 515 Query: 481 NATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 + L+ L + + KVL+ LE L R ++ + Sbjct: 516 ----TQNSGKFGLLVKMLENLKKNGHKVLIFSLMTRFLDVLEDYLECRGDMKYCRIDGSI 571 Query: 539 SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 + ER++ F +++ LL + G G N A ++++D +NP + Q R Sbjct: 572 AQTEREQKIKEFNQDEDVFCFLLSTRAGGLGINLTAADTVIIYDSDWNPQIDLQAQDRCH 631 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPD 658 RIGQ ++I T + +++ + L G ++ + A Sbjct: 632 RIGQKRSVRIFRLLTLGTVEKKVLQTATKKLKLERLIIHKGNFKGNTQQQSKMTITAQNL 691 Query: 659 QTEGFDDLIKNCREQHEALKAQL------EQGRDRLLEIHSNGGEKAQALAESI 706 D + N + E + + E+G D L G E+A + Sbjct: 692 MEILDDTQVNNDSKHDEGINDDILDRLINERGDDSTLPAAGVGYEEAHIFQQDF 745 >UniRef50_B7XJ60 SWF/SNF family helicase n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XJ60_ENTBH Length = 1176 Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 113/622 (18%), Positives = 213/622 (34%), Gaps = 41/622 (6%) Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEV 179 +M + R S+Q + S + +L P+QL + + R R ++ADE+ Sbjct: 228 KMRHTSWPIDWRPDKSQQIKYTESYVYKNNNTLRPYQLEGINWLMNRWYWRQSCIMADEM 287 Query: 180 GLGKTIEAGMILHQQLLS-GAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEA 238 GLGKT+++ + V++I P + W E NLR + Sbjct: 288 GLGKTVQSVCFIEALSREFNYNHPVIVIAPLSTIVHWEREFAAWTNLRVLTYHGSIQGRD 347 Query: 239 QHDAYNPFDT--------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 Y + +++ + + EHL + E+ + ++DEAH L ++ Sbjct: 348 ILVEYEFTNKTGNINVRLFDVILTTYEMVM---AGQEHLSQFEYSVSIIDEAHRL---KN 401 Query: 291 APSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQK-NY 349 S+ +++ L + +LLT TP Q + +A +D RF+ F++E K N Sbjct: 402 PNSKAAKSLRLL--KINHKVLLTGTPIQNNLAELWALFNFIDSQRFNSLDNFLKEYKLNN 459 Query: 350 RPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMD 409 D + LL L + ++ + +++ ++ + ++ ++ L Sbjct: 460 SKDVDKLQALLKPLMLRRMKEDVETSIPAKEETIIEVELTIAQKRYYRAILEKNFEFL-- 517 Query: 410 RHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY 469 S+ N N + K +H L + + + D L Sbjct: 518 -QSNSKKNVPNLINAMMELRKCCIHPYLLKGAEETIVRDYLQRKKINVRVNVDNMLHSLG 576 Query: 470 PERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGI 529 + YQ + D + KVL+ L + L R+ Sbjct: 577 EDLYYQILIQSSGKLVLLD------KLLVKLQGKHKVLIFSQMTKCLDLLSEYLSYRK-F 629 Query: 530 RAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDL 589 + + R A F+ ED+ LLC+ G G N A ++FD +NP Sbjct: 630 KYERIDGSIRGDLRQAAIDRFSTEDS-FVFLLCTRAGGVGINLTAADTCIIFDSDWNPQN 688 Query: 590 LEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYND 649 Q R RIGQ + ++I+ + + + + L + + D Sbjct: 689 DLQAQARCHRIGQKNQVKIYRLVTKNSYEREMFDKAGMKLGLDKAVLQKMSFMEGENAKD 748 Query: 650 L----------INYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKA 699 + I L D + E Q+ + R R++ G + Sbjct: 749 ISEKDINKGDAIQMLLRKGAYGVLMDQEDEEDKFCEEDIDQILERRTRIIRHEEGGNVFS 808 Query: 700 QALAESIEEQDDDTNLIAFAMN 721 +A + EE DD + Sbjct: 809 KATFQVEEEVDDPLFWDNLLNS 830 >UniRef50_C4QF78 Helicase, putative n=1 Tax=Schistosoma mansoni RepID=C4QF78_SCHMA Length = 1436 Score = 517 bits (1333), Expect = e-145, Method: Composition-based stats. Identities = 113/707 (15%), Positives = 224/707 (31%), Gaps = 46/707 (6%) Query: 36 STGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEE--NGLLTYIGTRLDTEES 93 T + +P+ + H GW++ + + LL + Sbjct: 460 QTTTKEIVEGDAAPLAS---EVCTWLQEHQGWEILPTDTDGSVIHDLLEPDEEFKRKRKF 516 Query: 94 GVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTS 153 + V ++ + G+ + Y E+ + S L R Sbjct: 517 DDDDDDDDNSMVHVGTEDDEYNKRGESG-ANAPQSYYTLAHAVREEVKEQASILVHGR-- 573 Query: 154 LIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAA-ERVLIIVPET 210 L +QL + + +LADE+GLGKTI+ ++ + LIIVP + Sbjct: 574 LKEYQLRGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMERKRVNGPFLIIVPLS 633 Query: 211 LQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHL 269 + W +E R +++ L+ A +++ + ++ + K L Sbjct: 634 VMSNWAMEFDRWGPSVKKILYKGSPQARRLLQTQIKASKINVLLTTYEYIIKDK---SAL 690 Query: 270 CEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLR 329 + +W +++DE H + ++ + Q + P LLLT TP Q + +A L Sbjct: 691 SKVKWKYMIIDEGHRM---KNHHCKLTQVLNTY-YTAPYRLLLTGTPLQNKLPELWALLN 746 Query: 330 LLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAA 389 L P F F + +L+ +E ++ + + LL+ Sbjct: 747 FLLPTIFESVNTFEQWFNAPFAATGEKV------ELNQEETLLIIRRLHKVLRPFLLRRL 800 Query: 390 NSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPK------------RELHTIK 437 + E + E V + RVL+ + ++ R L Sbjct: 801 KREVESQLPEKVEYVIKC-EMSDLQRVLYSHMQSKGVILTDGSEKDKKGKGGCRTLMNTI 859 Query: 438 LPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNAT-WWNFDPRVEWLMG 496 + L I A P + + E L Sbjct: 860 MQLRKICNHPFMFPHIEMAIAEQNFLNVHNGNPPPTLPVPTQVEGKILYRSSGKFELLDR 919 Query: 497 YLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAE-E 553 L + +VL+ C + ++ R R +R F + Sbjct: 920 ILPKLKCCGHRVLIFCQMTSLMTIMQDYFDYR-NFRYLRLDGTTRSEDRGELLVKFNDTS 978 Query: 554 DTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYL 613 + LL + G G N Q A +++FD +NP Q R RIGQ +++++ Sbjct: 979 EDIFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLIS 1038 Query: 614 EKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQ 673 + + ++ LD + G S + +L + + + D ++ Sbjct: 1039 INSVEEKILAAARFKLDVDQKVIQAGMFDQKSTGTERRQFLQALLEQDEEADEEEDEAPD 1098 Query: 674 HEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 E + L + + E A+ ++ + L+ F+ Sbjct: 1099 DETINQMLARNEE---EFEIYQRLDAERQFAESQQAKREPRLMEFSE 1142 >UniRef50_A9TI22 SNF2 family DNA-dependent ATPase (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TI22_PHYPA Length = 1245 Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats. Identities = 108/662 (16%), Positives = 232/662 (35%), Gaps = 87/662 (13%) Query: 70 QVEEVKEENGLLTYIGTRLDTE--ESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFA 127 +V +++ + Y+ + E+ + E L + K ++ + + + A Sbjct: 207 RVLDMRHNGDITEYLVKWKELGYDEATWEVEEDVLAFQAEVDKFKEIMSRQALKKRKGSA 266 Query: 128 LR---YRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLG 182 L + R+ + F+ L G SL P+QL + + V+LADE+GLG Sbjct: 267 LDNKDLKRRRKDFKPFKKTPKFLVGG--SLHPYQLEGLNFLRFAWEQNKHVILADEMGLG 324 Query: 183 KTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHD 241 KTI++ +L + L++ P + W E + ++ A A Sbjct: 325 KTIQSISLLGSLIEENVGLPHLVVAPLSTLRNWEREFATWCPQMNVVMYVGSSQARAILR 384 Query: 242 AYNPFD-------------------------TEQLVICSLDFARRSKQRLEHLCEAEWDL 276 Y F +++ S + L+ L +W+ Sbjct: 385 QYEFFFPQKSSKKSKDKGKKKMAGESKQDRVKFDVLLTSYEMINLDTTILKAL---KWEC 441 Query: 277 LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRF 336 L+VDE H L ++ S+ +Q + + +LLT TP Q ++ F + LD +F Sbjct: 442 LIVDEGHRL---KNKDSKLFQTLTTFS--TRHRVLLTGTPLQNNLDELFMLMHFLDAGKF 496 Query: 337 HDFAQFVEEQK--NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSE 394 + +F +E + N + +LA + L + ++L EM ++++ ++ ++ E Sbjct: 497 NSLEEFQQEFQDINQEEQVGRLHKMLAPHLLRRVKKDVLKEMPPKKELILRVELSSLQKE 556 Query: 395 DAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIM 454 ++ + +L +G P+ L + + L + G+ Sbjct: 557 FYKAILTKNYQIL----------------AKQGGPQVSLTNVVMELRKLCGHPYLLEGVE 600 Query: 455 GARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAK 512 + N ++ L +T + +VL+ Sbjct: 601 PT-----------------VRNQAEANRQLLENSGKLLLLDKMMTKLHSQGHRVLIYSQF 643 Query: 513 AATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRN 571 LE L ++ +S ER + ++ LL + G G N Sbjct: 644 TRMLDILEDWLHLKK-WGYERIDGKISGSERQIRIDRYNSPNSTKFCFLLSTRAGGLGIN 702 Query: 572 FQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDA 631 A ++++D +NP Q + R R+GQ + + I T + +++ + + Sbjct: 703 LATADTVIIYDSDWNPHADLQAMARAHRLGQQNKVMIFRLVTRGTIEERMMQMTKKKMVL 762 Query: 632 FEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEI 691 + +++ + ++ + E F + ++ + + DRLL+ Sbjct: 763 EHLVVGRMKK--ENINQEELDDILRYGAMELFSEKDEDGKTRQIHYDDSA---IDRLLDR 817 Query: 692 HS 693 Sbjct: 818 AQ 819 >UniRef50_Q8TDI0 Chromodomain-helicase-DNA-binding protein 5 n=58 Tax=Eumetazoa RepID=CHD5_HUMAN Length = 1954 Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats. Identities = 101/560 (18%), Positives = 180/560 (32%), Gaps = 70/560 (12%) Query: 140 FRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLLS 197 F + +L P+QL + + A +LADE+GLGKT++ + L+ Sbjct: 686 FDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKE 745 Query: 198 GA-AERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQ---------------HD 241 G L+ P + W E F + E++ Sbjct: 746 GHSKGPYLVSAPLSTIINWEREFEMW-APDFYVVTYTGDKESRSVIRENEFSFEDNAIRS 804 Query: 242 AYNPFD-------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSR 294 F +++ S + + L EW LVVDEAH L ++ S+ Sbjct: 805 GKKVFRMKKEVQIKFHVLLTSYELITIDQAI---LGSIEWACLVVDEAHRL---KNNQSK 858 Query: 295 EYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY--RPV 352 ++ + + + LLLT TP Q +E F L L P RF++ F+EE + Sbjct: 859 FFRVLN--SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQ 916 Query: 353 ADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHG 412 + LL + L + ++ M + ++ ++ + + + L Sbjct: 917 IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL----- 971 Query: 413 TSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPER 472 N G + L I + L Sbjct: 972 ----------NSKGGGNQVSLLNIMMDLKKCCNHPYLFP--------------VAAVEAP 1007 Query: 473 IYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIR 530 + D ++ ++ L L R +VL+ LE L E EG + Sbjct: 1008 VLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL-EYEGYK 1066 Query: 531 AAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDL 589 G++ R A F LL + G G N A ++++D +NP Sbjct: 1067 YERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHN 1126 Query: 590 LEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC-PTGRTIYDSVYN 648 Q R RIGQ + I+ + + + + + P + S+ Sbjct: 1127 DIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTK 1186 Query: 649 DLINYLASPDQTEGFDDLIK 668 ++ + E F D ++ Sbjct: 1187 QELDDILKFGTEELFKDDVE 1206 >UniRef50_A2ED18 SNF2 family N-terminal domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2ED18_TRIVA Length = 1425 Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats. Identities = 108/612 (17%), Positives = 209/612 (34%), Gaps = 61/612 (9%) Query: 151 RTSLIPHQLNIAHDVGRRHAP--RVLLADEVGLGKTIEAGMILHQQ-LLSGAAERVLIIV 207 +L +QL + + +LADE+GLGKT++ L + SG L++ Sbjct: 246 GNTLRDYQLQGLNWLRYCWYNHYNSILADEMGLGKTVQLVTTLIEVSKASGIRGPYLVLA 305 Query: 208 PETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQ-----------LVICSL 256 P + H W E +L ++ A+ Y E +VI + Sbjct: 306 PLSTLHHWEKEFQNWSDLNVIVYHGCPLAKEVIQRYELCKIENGVRDTEKLNCEVVITNY 365 Query: 257 DFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATP 316 + E EW LV+DE H L ++ S+ Y ++QL+ LLT TP Sbjct: 366 ETFMSD---FEIFRRVEWRYLVLDEGHRL---KNHQSKCYGLLQQLSYK--HCTLLTGTP 417 Query: 317 EQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEM 376 Q +E ++ L LL P F D F++E + Sbjct: 418 IQNNVEELWSLLHLLQPELFDDLPAFLQEFGQIDNA-------------------QTLQN 458 Query: 377 IGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRE---- 432 + + LL+ SD E +A++E + ++ T + +R + + + Sbjct: 459 LQQVIKPFLLRRKKSDVETTIAAKEETIIQ-VELTRTQKTFYRAFLDENRDVLLSQITSG 517 Query: 433 ----LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFD 488 L + + L + G +A P+ + + Sbjct: 518 ALPSLKNLMMQLRKVCNHPYLIKGATDTILEQFTKASPENTPKS-----DIELKALVQSS 572 Query: 489 PRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRA 546 ++ + L + KVL+ LE + + G + ++ +R A Sbjct: 573 GKLILIDKLLPKLKADGHKVLIFSQMVKVLDILEDYIAIK-GYKCERIDGSVAENDRQAA 631 Query: 547 AAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 F + LLC++ G G N A ++++D +NP Q R RIGQ + Sbjct: 632 IERFGNDPDAFIFLLCTKAGGVGINLTAADTVIIYDSDWNPQNDIQAQSRCHRIGQTQKV 691 Query: 607 QIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYD-SVYNDLINYLASPDQTEGFDD 665 +++ T + ++ + L + + + I+ L + +D Sbjct: 692 KVYRLVTRGTYELDMLDRASKKLGLDHALLDSVEVSNNPKMEAQEIDKLLRRGVYDIAND 751 Query: 666 LIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL--IAFAMNLF 723 + A Q+ R L+ + + + + + A E +D ++ F + Sbjct: 752 DDTEIEKFCAADIDQILLDRSHDLKTNESKTDSSFSKATFSAETNDGIDVKDKDFWQKMM 811 Query: 724 DIIGINQDDRGD 735 I + + + Sbjct: 812 PKITMKVEKPLE 823 >UniRef50_B7FTA0 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FTA0_PHATR Length = 995 Score = 515 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 105/654 (16%), Positives = 212/654 (32%), Gaps = 36/654 (5%) Query: 67 WQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRF 126 + ++ ++ + + L + S + + Sbjct: 160 EKARIAALRANDMTAYSKLLEETRNDRLQYLLDKTEKHFTQISSLLHQERSDDGGDQKGN 219 Query: 127 ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKT 184 Y + +E+ R P + G L +QL + + +LADE+GLGKT Sbjct: 220 NSYYASAHLKTEEVRQPSILVGG---ELKEYQLLGLQWLVSLYNNKLNGILADEMGLGKT 276 Query: 185 IEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDA 242 I+A ++ + L+IVP + W E L+ R + + Sbjct: 277 IQAISLIAYLMEFKQNLGPYLVIVPLSTLSNWQNEFLKWCPAARLICYKGTPGLRKEIYR 336 Query: 243 YNPFD-TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 +++ + ++ + K + L + +W +VDE H + ++A S+ + Sbjct: 337 DQVRTGHFNVLLTTYEYIIKDK---KFLRKIDWQYAIVDEGHRM---KNAQSKFAVTLGT 390 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLA 361 +LLT TP + ++ L L P F+ F + + Sbjct: 391 -QYSTRYRVLLTGTPLMNDLSELWSLLNFLLPTIFNSVETFDQWFSRPFEQFGGGSNTDE 449 Query: 362 GNKL-SNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN 420 G+ L SN+E ++ + E +L+ S+ D + E V + + L++ Sbjct: 450 GDDLLSNEERILVIHRLHELLRPFMLRRVKSEVLDQLPEKVEKVLRC-ELSSWQKELYKQ 508 Query: 421 TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD 480 T + G + +P E Sbjct: 509 ISKKAVA-------------DTALMGTDTQAPSRGLNNIVMQLRKVCNHPYLFSPEGYHI 555 Query: 481 NATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 N ++ L L R +VL+ A +E R G ++ Sbjct: 556 NDIIVRSSGKMALLDQMLPKLRAAGHRVLMFTQMTAVMTIMEDYFALR-GYKSLRLDGST 614 Query: 539 SIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL 597 ER++ F D+ LL + G G N A +++FD +NP + Q R Sbjct: 615 PAEEREKRMYKFNAPDSPYFVFLLSTRAGGLGLNLTSADTVIIFDSDWNPMMDLQAQDRA 674 Query: 598 DRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASP 657 RIGQ D+ + + ++ +E L E +G+ ++ + N L Sbjct: 675 HRIGQRSDVSVFRLITYSPVEEKILSRANEKLSVSELVVESGQ--FNKQGGESDNSLERK 732 Query: 658 DQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDD 711 E + ++ ++ + +L + + ++ E +E + Sbjct: 733 RLMEKSAGSEDGEEDDDNNSESSDKEDLNEMLSNNEADYQLYSSIDEQLEREGG 786 >UniRef50_D0NVP0 Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NVP0_PHYIN Length = 1092 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 114/587 (19%), Positives = 202/587 (34%), Gaps = 71/587 (12%) Query: 153 SLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPE 209 ++ P+QL + + R H +LADE+GLGKT+++ +L G +IIVP+ Sbjct: 152 TMKPYQLEGLNWMIRLHDSGVNGILADEMGLGKTLQSISLLAYLREARGIEGPHIIIVPK 211 Query: 210 TLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEH 268 + W+ E+ R ++ F + A ++ S + A K Sbjct: 212 STVGNWMRELKRWCPSIKAFKFMGSKDERAVQRETVVRQDFDALVLSYEVAIIEKSI--- 268 Query: 269 LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 L + +W L++DEAH + ++ S+ + + + V LL+T TP Q + +A L Sbjct: 269 LQKIKWKYLLIDEAHRV---KNENSKLSKVVREF--KVEHRLLITGTPLQNNLHELWALL 323 Query: 329 RLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQA 388 L P+ F D F + + + + LL+ Sbjct: 324 NFLLPDVFSDSEDFDAWFNVDE----------------QEGQENVIKKLHTILRPFLLRR 367 Query: 389 ANSDSEDAQSARQELVSML----MDRHGTSRVLFRNT--RNGVKGFPKRELHTIKLPLPT 442 +D E + + E + M R RVL R+ N + G + L I + L Sbjct: 368 LKADVEHSLPPKIETKLYVGLSEMQREWYMRVLHRDATHLNAIGGSDRVRLLNILMQLRK 427 Query: 443 QYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR 502 G E W ++ L L + Sbjct: 428 VCNHPYLFEGAEPGPPYQE-------------------GPHLWENCGKMTLLHKLLPKLQ 468 Query: 503 --SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-V 559 +VL+ C + LE +R +RD F E + Sbjct: 469 AQGSRVLIFCQMTSMMDILEDYMRY-FSHDYCRLDGSTKGEDRDNMMEEFNEPGSSKFCF 527 Query: 560 LLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS 619 LL + G G N A +++FD +NP + Q + R RIGQ +++ + T + Sbjct: 528 LLSTRAGGLGINLATADIVILFDSDWNPQVDLQAMDRAHRIGQTKIVRVFRFITDGTVEE 587 Query: 620 VLVRWYHEGLDAFEHTCPTGRTIYDSV--------------YNDLINYLASPDQTEGFDD 665 +V L GR + +++ N S + D Sbjct: 588 KIVERAERKLYLDAAIIQQGRLAQQNRKLSKDELMTMVRFGADEIFNARGSMITDDDIDA 647 Query: 666 LIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDD 712 ++ E+ E++K ++ L S G+ A S+ E + + Sbjct: 648 ILARGEERTESMKGKIAADMQHNLANFSLSGDNGNANVSSLYEFEGE 694 >UniRef50_UPI000180CCFF PREDICTED: similar to chromodomain helicase DNA binding protein 3 n=1 Tax=Ciona intestinalis RepID=UPI000180CCFF Length = 1904 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 108/665 (16%), Positives = 212/665 (31%), Gaps = 87/665 (13%) Query: 133 RKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMI 190 R SE++ + + SL +QL + + +LADE+GLGKTI+ + Sbjct: 657 RPDPSEKYVDQPTFITDLGLSLHEYQLEGLNWLRFSWTQGTDTILADEMGLGKTIQTIVF 716 Query: 191 LHQQLLSGA-AERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFD- 247 + + G LI VP + W E NL + +R + A Sbjct: 717 VKSLVEEGHTRGPFLISVPLSTMINWEREFELWAPNLYVVSYYGDRDSRAVIRDNEFSYD 776 Query: 248 -------------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 +++ S + L +W ++ +DEAH L Sbjct: 777 DNAIRSGAKASRLKSGCLVKFHVLLTSYEMCTIDSA---TLSSVDWVMVCIDEAHRL--- 830 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 ++ S+ ++ + + +V LLLT TP Q +E F L L P++F D F++E Sbjct: 831 KNNQSKFFKVLSE--YNVAHKLLLTGTPLQNNLEELFHLLNFLVPDKFTDMNGFLDEFAE 888 Query: 349 Y--RPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSM 406 + +L + L + ++L + + + + + +++ Sbjct: 889 IAQEDQVKKLHEMLGPHMLRRLKADVLTGLASKSEFIVRV--------NLSPLQRKFYRY 940 Query: 407 LMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARD 466 ++ R+ N G L I + L + Sbjct: 941 ILARNFKG-------LNSRGGPNNSSLLNIMMDLKKCCNHPYLFNK-------------- 979 Query: 467 MLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLR 524 + + ++ L L R +VL+ LE L Sbjct: 980 PAEEAQRSHNGAFEGTELTKTSGKLIVLQKMLRKLKDRGNRVLIFSQMTRMLDILEDFL- 1038 Query: 525 EREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDL 583 E EG + ++ R + F ++ LL + G G N A + ++D Sbjct: 1039 EYEGYKYERIDGSITGSIRQESIDRFNAPNSDHFAFLLSTRAGGLGINLATADTVFIYDS 1098 Query: 584 PFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC--PTGRT 641 +NP Q R RIGQ + + I+ + + + + + G + Sbjct: 1099 DWNPHNDIQAFSRAHRIGQTNKVMIYRFVTKNSVEERVAEVAKRKMMLTHLVVRPGMGSS 1158 Query: 642 IYDSVYNDLINYLASPDQTEGF-DDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 S+ ++ + F D+ + +E DR S G +A+ Sbjct: 1159 KTASMTKQELDDILKFGTEALFKDEDDAEGNDFIHYDDKAIEALLDR-----SKEGLEAK 1213 Query: 701 ALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTP--------SDHMLVPDFP 752 S + L +F + + + + + I+ + +L + Sbjct: 1214 ENENSRM----NEYLSSFKVATYKYSETHVEPEPEREIIKETMEQPDPNYWERLLRHHYE 1269 Query: 753 GLSED 757 E+ Sbjct: 1270 QQQEE 1274 >UniRef50_Q0UG06 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UG06_PHANO Length = 1333 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 111/698 (15%), Positives = 221/698 (31%), Gaps = 82/698 (11%) Query: 75 KEENGLLTYIGTR-LDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRAR 133 K+ +G L + + + + ++ + D+ + + Y Sbjct: 470 KQTDGFLKQLAASVKAQQRTSIDRYQLADEVSEDEESEDDQDSDAEPRPGKKRTDYYEIA 529 Query: 134 KYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMIL 191 + E+ S L G +L +Q+ + + +LADE+GLGKTI+ ++ Sbjct: 530 HRNKEEVTQQASILVGG--TLKEYQVKGLQWMVSLYNNNLNGILADEMGLGKTIQTISLI 587 Query: 192 HQQLLSGA-AERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTE 249 + L+IVP + W E + + + Q+ + Sbjct: 588 TYLIEKKRQPGPYLVIVPLSTLTNWNNEFEKWAPTVSKITYKGPPNQRKQYQQQIRWGQF 647 Query: 250 QLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGV 309 Q+++ + +F + + L + +W ++VDE H + ++A S+ I Q Sbjct: 648 QVLLTTYEFIIKDRPI---LSKIKWVHMIVDEGHRM---KNAGSKLSVTITQY-YTTRYR 700 Query: 310 LLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDE 369 L+LT TP Q + +A L + P F F E + +L+ +E Sbjct: 701 LILTGTPLQNNLTELWAMLNFVLPTIFKSATSFDEWFNTPFANTGGQDKM----ELTEEE 756 Query: 370 LNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFP 429 ++ + + + LL+ D E K P Sbjct: 757 QLLVIKRLHKVLRPFLLRRLKKDVE-------------------------------KDLP 785 Query: 430 KRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDP 489 ++ L + E + + N W Sbjct: 786 DKDPKAASSSLRKLCNHPFVFEQV-----------------EEVMNPTKSTNDLLWRASG 828 Query: 490 RVEWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAA 547 + E L L +VL+ +E LR R G++ +R Sbjct: 829 KFELLDRILPKFEKTGHRVLMFFQMTQIMNIMEDYLRLR-GMKYMRLDGATKADDRSELL 887 Query: 548 AWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 F ++ LL + G G N Q A ++++D +NP Q R RIGQ +++ Sbjct: 888 KEFNAPNSPYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEV 947 Query: 607 QIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDL 666 +I + + ++ + LD G+ S + L ++ + Sbjct: 948 RILRLITSNSVEEKILERANYKLDMDGKVIQAGKFDNKSTNEERDAMLRIMLESAEAAES 1007 Query: 667 IKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQAL----AESIEEQDDDTNLIAFAMNL 722 ++ + L + + D ++ + + ++ L +N Sbjct: 1008 LEQEEMDDDDLNLIMMRNEDEFKLFQEMDRQRLTDDPYGPGKPLGRLIGESELPDIYLND 1067 Query: 723 FDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGIT 760 D I +DD TP +DG+T Sbjct: 1068 ADPIVEEKDD--------TPVGRGARERTRVKYDDGLT 1097 >UniRef50_A9TQR2 SNF2 family chromodomain-helicase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TQR2_PHYPA Length = 1677 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 97/558 (17%), Positives = 187/558 (33%), Gaps = 46/558 (8%) Query: 145 SGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQL-LSGAAE 201 +G+ L +Q + R +LADE+GLGKTI++ +L Sbjct: 532 AGVFKDGRRLRDYQEAGVAWLDHNFKNRTNCILADEMGLGKTIQSVAMLENLRTKRKIRG 591 Query: 202 RVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD--------TEQLVI 253 L++ P + W E+ ++ ++ + Y + +++ Sbjct: 592 PFLVVAPVSTLGHWRREVESATDMNCVVYTGNQEDRQIIRNYEFYYGDGNSSELKFNILL 651 Query: 254 CSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLT 313 S + + + L W ++VDEAH L + S+ QA+ QL G+LLLT Sbjct: 652 TSFEILMKDQN---KLARETWQYIIVDEAHRL---KSRESKTAQALRQLRVRHGGLLLLT 705 Query: 314 ATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNML 373 TP Q + F+ L LLD N F F+ + + + + Sbjct: 706 GTPVQNNTKELFSLLYLLDRNEFDSEEDFLLKYGDIKAAEQIKDLQDN------------ 753 Query: 374 GEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKREL 433 LL+ D E + ++E+ + ++ R +R + Sbjct: 754 ------ILRPRLLRRMKEDVEKSIPMKEEVTIVWVELTKEQRAFYRAIYENNISTLLKGS 807 Query: 434 HTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNAT---WWNFDPR 490 + P+ A+++ + + +++ R + N + Sbjct: 808 IATNM--PSLRNVAMELRKLCNHPFLCDGLEESIVFKHRSLNDGNASNLAETLLSQSSGK 865 Query: 491 VEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAA 548 + + L + ++VL+ LE L + G + +R A Sbjct: 866 MVLVDKLLPKLKEAGRRVLIFSQFTMMLDLLEDYLLSK-GYSYERIDGKIRGSDRQAAID 924 Query: 549 WFAEEDT-GAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 ++ +D+ LL + G G A +++D +NP Q + R RIGQ D++ Sbjct: 925 RYSAKDSSIFVFLLSTRAGGLGITLTAADTCIIYDSDWNPQNDLQAMARCHRIGQTKDVK 984 Query: 608 IHVPYLEKTAQSVLVRWYHEGLDAFEHTCP--TGRTIYDSVYNDLINYLASPDQTEGFDD 665 I+ T + L E G + ++ + L DD Sbjct: 985 IYRLITRNTYEQRLFECSSRKYGLDEAILGNRMGVDVTQDHNKNIESLLKHGAYDILKDD 1044 Query: 666 LIKNCREQHEALKAQLEQ 683 + ++ LEQ Sbjct: 1045 GEAASEFSSQNIEQILEQ 1062 >UniRef50_Q241C2 HSA family protein n=5 Tax=Oligohymenophorea RepID=Q241C2_TETTH Length = 1232 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 110/707 (15%), Positives = 226/707 (31%), Gaps = 58/707 (8%) Query: 75 KEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARK 134 K+ + L +G ++ ++ E + P D + + Y Sbjct: 350 KQTDKFLRELGAKIKEQKGDAQNEE----DTDIMVDPYDDDVKLLENLSKSNKVYYNLSH 405 Query: 135 YSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILH 192 E + L G + L P+QL + + +LADE+GLGKTI+ + Sbjct: 406 KIQETIDQQPTILEGGK--LKPYQLIGLKWLISLYNNKLNGILADEMGLGKTIQTISLFA 463 Query: 193 QQLL-SGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFDTEQ 250 + L++VP + W++E + ++ + + Sbjct: 464 YLMEVKKNNGPFLVVVPLSTISNWVLEFDKWAPKIKKIAYKGSPQVRKELAKELKTTKWN 523 Query: 251 LVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVL 310 + I + D+ + + L +W ++VDE H + +++ S+ + Q + Sbjct: 524 VCITTYDYILKDRLTLHKF---DWKYIIVDEGHRM---KNSKSKFASILGQ-QYTSDYRI 576 Query: 311 LLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDEL 370 LLT TP Q + +A L L P F F + P++ + + L+ +E Sbjct: 577 LLTGTPLQNNLGELWALLNFLLPKVFSSCDDFEKWFS--MPLSKFGSAAEKESALTEEEN 634 Query: 371 NMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLF-----RNTRNGV 425 ++ + + LL+ + E + E + ++ ++LF R+ Sbjct: 635 LLIINRLHQVLRPFLLRRVKKEVEAELPDKVEHIIK-VELSSWQKILFNKINDRSIDTSN 693 Query: 426 KGFP----KRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDN 481 F K+ L + + L + + + Sbjct: 694 DNFQSKNGKKALMNLMMQLKKCCNHPYLF----------------------LNSDAYQID 731 Query: 482 ATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGI-RAAVFHEGM 538 W + E L L +VL+ +E+ + RE + Sbjct: 732 DMIWRVSGKFELLDKMLAKLIRTGHRVLIFTQMTHVMDLMEEYFKLREDYIKYLRLDGTT 791 Query: 539 SIIERDRAAAWFAEEDTGA-QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL 597 ER A F + ++ +L + G G N Q A +++FD +NP + +Q R Sbjct: 792 KADERGVKMAQFNQPNSPYNVFILSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAQDRA 851 Query: 598 DRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTG---RTIYDSVYNDLINYL 654 RIG +++++ + ++ + E G + D+ + I L Sbjct: 852 HRIGSKSEVRVYRLVTNTWIEEEILSKAAYKMGLDEMIIQAGLYNQKSTDNDREEKIQDL 911 Query: 655 ASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTN 714 + D EQ + + E + EK + E I + + Sbjct: 912 LRKKKRYDEMDEEIPNDEQINQILCRNEDEYSIFTLMDQERIEKEKERYEKIMSYNQNQG 971 Query: 715 LIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITI 761 + + + + I P + + S I Sbjct: 972 ASEDENDRKVNYRLCTIEEVPDWIKAPPEKESEIKVYGRGSRQRKQI 1018 >UniRef50_A2Q9V0 Complex: ISW2p of S. cerevisiae forms a two-subunit complex with Itc1p n=33 Tax=Dikarya RepID=A2Q9V0_ASPNC Length = 1163 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 105/615 (17%), Positives = 195/615 (31%), Gaps = 58/615 (9%) Query: 151 RTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLLS-GAAERVLIIV 207 + + +Q+ + + H +LADE+GLGKT++ L LI V Sbjct: 194 KGEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYLRHVCEITGPHLIAV 253 Query: 208 PETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFDT-EQLVICSLDFARRSKQR 265 P++ W E + + + ++ + D + I S + R K Sbjct: 254 PKSTLDNWKREFGKWTPEVNVLVLQGDKEQRHKLINEELLDENFDVCITSYEMILREKA- 312 Query: 266 LEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHF 325 HL + W+ +++DEAH + ++ S Q I H LL+T TP Q + + Sbjct: 313 --HLKKFAWEYIIIDEAHRI---KNEESSLAQIIRVF--HSRNRLLITGTPLQNNLHELW 365 Query: 326 ARLRLLDPNRFHDFAQFVEEQK----NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQD 381 A L L P+ F D F + + V + +L L + ++ ++ +++ Sbjct: 366 ALLNFLLPDVFGDSEAFDQWFSGQDSDQDTVVQQLHRVLRPFLLRRVKSDVEKSLLPKKE 425 Query: 382 IEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLP 441 + + + + Q ++ + + K K L I + L Sbjct: 426 VNLYVPMSEMQVKWYQKILEKDIDAV-------------NGAAGKRESKTRLLNIVMQLR 472 Query: 442 TQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT-- 499 G D ++ L L Sbjct: 473 KCCNHPYLFEGAEPGPPYTTD-------------------EHLVYNAGKMTILDKLLARM 513 Query: 500 SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ- 558 + +VL+ + LE RE + +R A + + + Sbjct: 514 QKQGSRVLIFSQMSRVLDILEDYCVFRE-YNYCRIDGTTAHEDRIAAIDEYNKPGSEKFI 572 Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ 618 LL + G G N A +V+FD +NP Q + R RIGQ + + E + Sbjct: 573 FLLTTRAGGLGINLTTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVVVFRFVTENAIE 632 Query: 619 SVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALK 678 ++ + L + GR + L Q + A Sbjct: 633 EKVLERAAQKLRLDQLVIQQGRAQQQTKNAASKEELLGMIQHGAANVFNTQANTTISAEH 692 Query: 679 AQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGD--N 736 E D +L G E+ L + E+ D + + ++ G + DR Sbjct: 693 QISEDDIDDILR---KGEERTAQLNKKYEKLGIDDLQKFSSESAYEWNGKDFTDRKKDIG 749 Query: 737 MIVLTPSDHMLVPDF 751 + + P+ F Sbjct: 750 INWINPAKRERKEQF 764 >UniRef50_D1HIU5 Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=5 Tax=Magnoliophyta RepID=D1HIU5_VITVI Length = 1356 Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats. Identities = 107/628 (17%), Positives = 222/628 (35%), Gaps = 90/628 (14%) Query: 134 KYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVGLGKTIEAGMIL 191 + +QF L G SL P+QL + + V+LADE+GLGKTI++ L Sbjct: 268 QREFQQFEHSPEFLSGG--SLHPYQLEGLNFLRFSWGKQTHVILADEMGLGKTIQSIAFL 325 Query: 192 HQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFD--- 247 L++ P + W E + ++ +A + Y + Sbjct: 326 ASLFEEN-VSPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSSHARSVIRDYEFYFPKS 384 Query: 248 ---------------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLV 286 +++ S + L +W+ ++VDE H L Sbjct: 385 HKKIKKKKSGQIVTESKQDRIKFDVLLTSYEMINLDSA---SLKPIKWECMIVDEGHRL- 440 Query: 287 WSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ 346 ++ S+ + +++Q +LLT TP Q ++ F + LD +F +F EE Sbjct: 441 --KNKDSKLFLSLKQ--YLSKHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF 496 Query: 347 K--NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELV 404 K N + +LA + L + +++ E+ ++++ ++ ++ E ++ Sbjct: 497 KDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNY 556 Query: 405 SMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRA 464 +L R G L + + L + G+ Sbjct: 557 QILTRRGGAQISLI----------------NVVMELRKLCCHPYMLEGVEPD-------- 592 Query: 465 RDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQV 522 ++ +++ L + + +VL+ LE Sbjct: 593 ---------IEDATEAYKLLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDY 643 Query: 523 LREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMF 581 ++ + + ER F +++ LL + G G N A ++++ Sbjct: 644 CTYKK-WQYERIDGKVGGAERQVRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIY 702 Query: 582 DLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP--TG 639 D +NP Q + R R+GQ + + I+ T + +++ + + Sbjct: 703 DSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKA 762 Query: 640 RTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKA 699 + I +D+I Y + + D+ K+ + ++ + DRLL+ G E+A Sbjct: 763 QNINQEELDDIIRYGSKELFADENDEAGKSRQIHYD------DAAIDRLLDREQVGDEEA 816 Query: 700 QALAESIEEQDDDTNLIAFAMNLFDIIG 727 ++++ +DD L AF + F+ I Sbjct: 817 -----TLDDDEDDGFLKAFKVANFEYID 839 >UniRef50_B6K540 ATP-dependent DNA helicase Snf22 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K540_SCHJY Length = 1489 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 126/805 (15%), Positives = 258/805 (32%), Gaps = 76/805 (9%) Query: 177 DEVGLGKTIEAGMILHQQLLS-GAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDER 234 DE+GLGKTI+ + L LIIVP + W +E + +++ + Sbjct: 695 DEMGLGKTIQTISFITYLLERKNEQGPFLIIVPLSTLTNWSLEFEKWAPSVKIIAYKGPP 754 Query: 235 YAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSR 294 A Q+++ + ++ + + L + W +++DE H + ++ S+ Sbjct: 755 QVRKSLQARVRSGDFQVLLTTFEYVIKDRPV---LSKVRWLHMIIDEGHRM---KNTQSK 808 Query: 295 EYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVAD 354 + L+LT TP Q + +A L + P F+ F E A Sbjct: 809 LTNTLTTYYY-SRYRLILTGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANAG 867 Query: 355 AVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTS 414 + +LS +E ++ + + + LL+ D E + E V Sbjct: 868 GQDKM----ELSEEESLLVIKRLHKVLRPFLLRRLKKDVEKELPDKIEKVIKCP-LSALQ 922 Query: 415 RVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIY 474 L++ + F + + T +++ I E+ E+ Sbjct: 923 LRLYQQMKKHGILFVADG-EKGRTGMKGLQNTVMQLKKICNHPFVFEEV-------EQAI 974 Query: 475 QEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAA 532 + W + E L L + L+ +E LR R + Sbjct: 975 DPEGTNYDLLWRAAGKFELLDRVLPKLFRTGHRTLIFFQMTQIMSIMEDYLRYR-NWKYL 1033 Query: 533 VFHEGMSIIERDRAAAWFAEEDTG-AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLE 591 +R A F + ++ LL + G G N Q A +++FD +NP Sbjct: 1034 RLDGSTKAEDRSALLADFNDRNSDIYVFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDL 1093 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI 651 Q R RIGQ +++I +K+ + ++ LD G+ S + Sbjct: 1094 QAQDRAHRIGQTKEVRILRLITDKSIEENILARAQYKLDLDGKVIQAGKFDNKSTPEERE 1153 Query: 652 NYLASPDQTEGFDDLIKN--CREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAE----- 704 +L S + E DD + + + L + + + L ++ Q A Sbjct: 1154 AFLRSLLEHENGDDQANENHGKFEDDELNELISRNEEELKIFREIDQQRQQEDAYGKGKP 1213 Query: 705 --SIEEQDDDTNLIAFAMNLF----------------DIIGINQDDRGDNMIVLTPSDHM 746 + +D+ + ++ + + L D++ Sbjct: 1214 LPRLLSEDELPEIYRVDVDTLAAAAAEEENRAILMNHKRRRASISYAEPTLEELNEEDYL 1273 Query: 747 LVPDFPGLSEDGITITFDREVALAREDAQFITWE-HPLIRNGLDLILSGDTGSSTISLLK 805 L + T A +D F + H + + ++ L+ Sbjct: 1274 YSERSKRLRKRHTRGT----SAYDEDDDDFASPNYHTMSKADIEQEC-----------LR 1318 Query: 806 NKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQL 865 L + +Y ++ +N P + L + + + R++ Sbjct: 1319 AALKRCAMELYQAVYNLQDT--DGRPINALFLHIPSKKLYPDYYVIIKNPISLDKIKRKI 1376 Query: 866 NAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALR 925 +++ +LV D + E+ + DA N +E + +++ L R Sbjct: 1377 SSLRYRNLQELV----DDFMLMFSNARTYNEEHSEVYNDA--NRMEEVMRQKINDLIE-R 1429 Query: 926 AVNPNIRDDELTAIESNRQQVMESL 950 +EL E + ++ L Sbjct: 1430 NALKTYEAEELQLREQHLEESQRQL 1454 >UniRef50_A2DAM4 Type III restriction enzyme, res subunit family protein n=1 Tax=Trichomonas vaginalis RepID=A2DAM4_TRIVA Length = 1468 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 123/707 (17%), Positives = 241/707 (34%), Gaps = 59/707 (8%) Query: 57 PGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLF 116 PGD S ++ EE L Y+ + E + + +K + R Sbjct: 223 PGDVDQSVQKEIDRIIGYDEETKL--YLVKWKKEPYEYAS-WEANITDQDEINKFKKRNS 279 Query: 117 AGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVL 174 A + L ++ Y +P L +Q++ + + + + Sbjct: 280 ANRTSLSALNKL---SKPYGDGPGCIPLPK-YKNGNQLRDYQIDALNWLRASYQTGQNAI 335 Query: 175 LADEVGLGKTIEAGMILHQQLLS-GAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDE 233 LADE+GLGKT+ +L + G LI+ P W+ E N+ LF Sbjct: 336 LADEMGLGKTVMCISLLLDICQNCGVDGPFLIVAPLGTLPNWIREFESWSNIDTILFHGS 395 Query: 234 RYAEAQHDAYNPFDT--------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHL 285 + Y F Q+++ +++ +S+ E + + +W+L+++DEAH L Sbjct: 396 QQDRDLIAEYELFYKPPRQNIPKFQVLLTNIETVLKSQ---EVIQKIQWNLVIIDEAHRL 452 Query: 286 VWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEE 345 ++ S+ Y + + + VLL+T TP Q ++ FA + + P +F +F +E Sbjct: 453 ---KNLNSKIYSVM--FSLQMDHVLLMTGTPIQNNIDEIFALMHFIAPLKFPSLEEFKKE 507 Query: 346 QKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVS 405 + D + + ML + + L+ + +++ Sbjct: 508 HGSIETAEDV------ERIQNAIKPYMLRRKKCDVESTIGLKEETIVEVELTRSQKFYYR 561 Query: 406 MLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRAR 465 +L+DR ++ ++L+ + + L + Sbjct: 562 LLIDRKT------KDLTTHKSHALSQDLNNLAMQLRKVCNHPYLFPNV------------ 603 Query: 466 DMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVL 523 E I + E N N ++ ++ L R KVL+ LE+ L Sbjct: 604 ----EEEIVKPGEDPNEAMINASGKLVFVDKLLAKLRPKGDKVLIFSQMVHVLDILEEYL 659 Query: 524 REREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFD 582 R + R + F + + LLC+ G G N A++++++D Sbjct: 660 HYR-NYPYVRLDGSVVGDVRQESIDKFNDPEKDIFVFLLCTRAGGVGLNLTAATNVIIYD 718 Query: 583 LPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI 642 +NP Q R RIGQ HD++++ T +S + L + +G+ Sbjct: 719 SDWNPQNDLQAQARCHRIGQTHDVKVYRLITRGTYESDMFTRASMKLGLDQAILDSGQNA 778 Query: 643 YDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQAL 702 + I L F++ + Q+ + R L E A + Sbjct: 779 AQEMTPKEIETLIKRGAYYIFNEDDDAGDKFVTEDVDQILENHTRTLSKSVVDQESAFSR 838 Query: 703 AESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVP 749 + I ++D + L N +D + + Sbjct: 839 TQFIIDKDGEQ-LDLNDKNFWDRVIPENMRHKEADENAPLPPRRKKE 884 >UniRef50_Q9S775 CHD3-type chromatin-remodeling factor PICKLE n=10 Tax=Magnoliophyta RepID=PKL_ARATH Length = 1384 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 107/668 (16%), Positives = 224/668 (33%), Gaps = 86/668 (12%) Query: 56 NPGDTITSHDGWQ--MQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQD 113 + D + W ++ +EE+G L Y+ + E F Sbjct: 178 SEDDFVAIRPEWTTVDRILACREEDGELEYLVKYKEL-SYDECYWESE-SDISTFQNEIQ 235 Query: 114 RLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--AP 171 R + ++ +QF L+G L P+QL + + Sbjct: 236 RFKDVNSRTRRSKDVDHKRNPRDFQQFDHTPEFLKGL---LHPYQLEGLNFLRFSWSKQT 292 Query: 172 RVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALF 230 V+LADE+GLGKTI++ +L L+I P + W E + ++ Sbjct: 293 HVILADEMGLGKTIQSIALLASLFEENLI-PHLVIAPLSTLRNWEREFATWAPQMNVVMY 351 Query: 231 DDERYAEAQHDAYNPFD------------------------TEQLVICSLDFARRSKQRL 266 A A + + +++ S + Sbjct: 352 FGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSAV- 410 Query: 267 EHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFA 326 L +W+ ++VDE H L ++ S+ + ++ Q + + +LLT TP Q ++ F Sbjct: 411 --LKPIKWECMIVDEGHRL---KNKDSKLFSSLTQYSSN--HRILLTGTPLQNNLDELFM 463 Query: 327 RLRLLDPNRFHDFAQFVEEQK--NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEP 384 + LD +F +F EE K N + +LA + L + +++ +M ++++ Sbjct: 464 LMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELIL 523 Query: 385 LLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQY 444 + ++ E ++ +L + G L + I + L Sbjct: 524 RVDLSSLQKEYYKAIFTRNYQVLTKKGGAQISL----------------NNIMMELRKVC 567 Query: 445 QTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR-- 502 + G+ + + +++ L + + Sbjct: 568 CHPYMLEGVEP-----------------VIHDANEAFKQLLESCGKLQLLDKMMVKLKEQ 610 Query: 503 SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLL 561 +VL+ LE + + + ER F +++ LL Sbjct: 611 GHRVLIYTQFQHMLDLLEDYCT-HKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLL 669 Query: 562 CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVL 621 + G G N A ++++D +NP Q + R R+GQ + + I+ T + + Sbjct: 670 STRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERM 729 Query: 622 VRWYHEGLDAFEHTCPTGRT--IYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKA 679 ++ + + +T I +D+I Y + D+ K+ + ++ A Sbjct: 730 MQLTKKKMVLEHLVVGKLKTQNINQEELDDIIRYGSKELFASEDDEAGKSGKIHYDD--A 787 Query: 680 QLEQGRDR 687 +++ DR Sbjct: 788 AIDKLLDR 795 >UniRef50_Q08VX8 Type III restriction enzyme, res subunit family n=3 Tax=Cystobacterineae RepID=Q08VX8_STIAU Length = 1102 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 259/1028 (25%), Positives = 417/1028 (40%), Gaps = 95/1028 (9%) Query: 1 MPFTLGQRWISDTESELGLGTVVAV--DARTVTLLFPSTGENRLY-ARSDSPVTRVMFNP 57 M G + + E G+G + A+ + + FP+ + + + S + Sbjct: 93 MSLVEGLKVRYLPQPEWGVGHLAALMEEGAKAVVFFPAREDAPVLVSTKGSALVAYALPA 152 Query: 58 GDTITSHDGWQMQVEEVKE-ENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLF 116 G+ + + G V + GL Y+ DT E + E L + S L Sbjct: 153 GEPVVTVKGRAATVVSEEPGARGLRRYVIRYTDTGEEDE-MPESELRALPPRSDLLSTLR 211 Query: 117 AGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLA 176 G++ F LR +A E+ L R + PHQ+ + V PR +LA Sbjct: 212 EGRVGDAKAFTLRKQALVLDDERRCDALGALLASRVMVKPHQVGVVQRVLSARRPRFVLA 271 Query: 177 DEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA 236 DEVGLGKTIEAGM+ L+G A RVL++ P L QWLVE+ +FN F L D +RYA Sbjct: 272 DEVGLGKTIEAGMVFSALRLAGLARRVLVVAPSHLTVQWLVELFHKFNQLFTLMDSDRYA 331 Query: 237 E--AQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAE--WDLLVVDEAHHLVWSEDAP 292 + + +P++ LV+ SL+ R+++ + E WDL+++DEAHHL + Sbjct: 332 QSLKEQPDVSPWERFPLVVTSLELLSRTEEHRRAVAADEAFWDLVIIDEAHHLKGEK--- 388 Query: 293 SREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPV 352 ++A + LAE+ G+LLLTATP QL + L L+D F E + Sbjct: 389 --AFEAAQGLAENSWGLLLLTATPMQLDPAEYHGLLTLIDAATAPTVKGFEERLARQEEL 446 Query: 353 ADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHG 412 + AV LL G + ++ + G+ + R L+ L + + Sbjct: 447 SSAVRALLEGGEPASAVKALAKRFPGDAKL------------QGLKDRDALLEHLAETYS 494 Query: 413 TSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPER 472 S L RN R V GF R LH + L + + + A S + Sbjct: 495 LSDRLVRNRRAVVGGFSSRRLHRHPVQLSAEELKTRDAALAVLAGASLRGAPLANVMRRL 554 Query: 473 IY------------QEFEGDNATWWNFDPRVEWLMGYLT----SHRSQKVLVICAKAATA 516 + N D ++ +G L R KVLV T Sbjct: 555 ESSPSAFAGAVSANPALKAANLKLPARDAKLNAFLGVLRGIWAQEREAKVLVFTESRDTL 614 Query: 517 LQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFAS 576 L+ L REGI A +H + ++ERDR A F + + QVLLC+E+G EGRNFQFA Sbjct: 615 EALQAELG-REGIEALGYHGDLPLVERDRQVARFRDPEGP-QVLLCTEVGGEGRNFQFAH 672 Query: 577 HMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC 636 H+V +DLP++P +EQRIGRLDRIGQ+ ++IHV T S ++ + + F T Sbjct: 673 HLVHYDLPWSPATVEQRIGRLDRIGQSKPVEIHVFDPAGTLASDVLMLLADAVGVFGETV 732 Query: 637 PTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGG 696 + + V + L P + + + EA +AQ+++ D LL++ S Sbjct: 733 GGLDAVLEEVEDRLAELALLPREARV--AYAAELKAKVEAARAQVKRAYDPLLDLRSFDK 790 Query: 697 EKAQALAESIE-----------------------EQDDDTNLIAFAMNLFDIIG--INQD 731 + L + +D D L L +G ++ D Sbjct: 791 PAVERLVTRAQTRMGIEVDEDEEAEPLEDGLWGVARDLDERLEESVTELAKRVGIRVDTD 850 Query: 732 DRGDNMIVLTPSDHML-VPDFPGLS---EDGITITFDREVALAREDAQFITWEHPLIRNG 787 D D H L V PGL + + TF R+ A+ E+ ++ H L+ Sbjct: 851 DEVDAFQCAFHFGHALNVEGLPGLDVMEDRTVLGTFWRDTAVEAEELEYFATGHSLVEAL 910 Query: 788 LDLILSGDTGSSTISLLKNKALPVGTL---LVELIYVVEAQAPK---------QLQLNRF 835 + G G S ++ GTL +E +Y V+ P+ QL RF Sbjct: 911 FGFLRDGPYGRSGFRFIE----KRGTLKAKGLEFLYHVQLPEPEDTSPGARVPSRQLARF 966 Query: 836 LPPTPVRMLLDK-NGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQ 894 L T + + + + G + A+ ++ V A + + + Sbjct: 967 LERTLLHVAVAEGQGGPKVDASLLSSLEADGKALKGDEVARAFPGFSVFVEAAVPVAKKA 1026 Query: 895 IEKSARALIDAARNEADEKLSAELSRLEAL---RAVNPNIRDDELTAIESNRQQVMESLD 951 E L A+ + + A L+R++ + ++ ++L A + +++ +L Sbjct: 1027 AEAELGKLAVKAKKAIEAERDAALARMKLSLGHQGLSAEAVQEQLDAEGMHYDRLLRALS 1086 Query: 952 QAGWRLDA 959 A LD+ Sbjct: 1087 GAKVSLDS 1094 >UniRef50_A2FPM0 F/Y-rich N-terminus family protein n=1 Tax=Trichomonas vaginalis RepID=A2FPM0_TRIVA Length = 1483 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 100/597 (16%), Positives = 204/597 (34%), Gaps = 55/597 (9%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQ-LLSGAAERV 203 + +QL + +LADE+GLGKT +A + L+ G + Sbjct: 205 PSKSGKKIRSYQLEGLNFFVNSWYHRKNAILADEMGLGKTCQASIFLNYLHKKQGISGPF 264 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD------TEQLVICSLD 257 +I+ P T W E+ +L+ F + Y F +++ + + Sbjct: 265 IILAPLTTIPHWERELADWTDLKVIAFFGSKDKRKALLNYEFFYPGTTIPKFNVLVTTYE 324 Query: 258 FARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPE 317 +A + + E + W ++VDEAH L ++ S+ + + LLLT TP Sbjct: 325 YAIKESKMFED--KFIWQCIIVDEAHRL---KNFESKLTVTMH--SYKSEFKLLLTGTPL 377 Query: 318 QLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMI 377 + ++ L LD RF+D +F ++ +++ L ++ Sbjct: 378 HNNTQELWSLLNFLDEERFNDIQRFKDKFGVLSDA---------------EQITELQAIL 422 Query: 378 GEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELH--- 434 +L+ D E + +E++ R +++ + + R H Sbjct: 423 H----PLMLRRLKGDVEKNLAPLEEVIIEC-GMTSHQRAYYQSIYSKNMEYLHRGAHSSN 477 Query: 435 -----TIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDP 489 I + L ++G + E +A + P+ + + + + Sbjct: 478 TTNLQNISMELRKVCNHPYLINGAED-QIIIERKAMMNIDPD-VKPDLTFEYESLIRSSG 535 Query: 490 RV--EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAA 547 ++ + +VL+ ++ L + G + + R Sbjct: 536 KMILLDKLLAKLKANGHRVLLFSQMTKMLDIIQDYLVYK-GYKFERLDGSVKSEIRQGMI 594 Query: 548 AWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 F EE + LLC++ G G N A ++++D +NP Q R RIGQ ++ Sbjct: 595 DKFNEEGSEDFIFLLCTKAGGLGINLTSADTVIIYDSDWNPQNDLQATARAHRIGQKKNV 654 Query: 607 QIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDL 666 +++ K+ + + L + D ND + L F++ Sbjct: 655 KVYRLLTAKSYERKMFDTAAIKLGLDQAVL---ENTKDKPKNDDMEKLLRLGAYYAFEED 711 Query: 667 IKNCREQHEALKAQLEQGRDRL--LEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 + + +E + + ++ S G L +E D D + F M Sbjct: 712 DGSAEKFNEEDIDTILSKSKTIKHEQVGSAEGSTFSKLTFDLETDDIDVSAPDFWMK 768 >UniRef50_Q5WN07 Os05g0150300 protein n=4 Tax=Magnoliophyta RepID=Q5WN07_ORYSJ Length = 1158 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 105/639 (16%), Positives = 205/639 (32%), Gaps = 71/639 (11%) Query: 142 MPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLL-SG 198 S ++G + +QL + + R + +LADE+GLGKT++ +L G Sbjct: 276 SQPSCIKG---KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRG 332 Query: 199 AAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEA-QHDAYNPFDTEQLVICSL 256 +++ P++ W+ E+ R LR F + + + S Sbjct: 333 ITGPHMVVAPKSTLGNWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPGKFDVCVTSF 392 Query: 257 DFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATP 316 + A + K L W +++DEAH + ++ S + + + LL+T TP Sbjct: 393 EMAIKEKT---ALKRFSWRYIIIDEAHRI---KNENSLLSKTMR--IYNTNYRLLITGTP 444 Query: 317 EQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEM 376 Q + ++ L L P F F + + + + + Sbjct: 445 LQNNLHELWSLLNFLLPEIFSSAETFDDWFQISGENDQ----------------HEVVQQ 488 Query: 377 IGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG-----VKGFPKR 431 + + LL+ SD E ++E + + + +R G ++ Sbjct: 489 LHKVLRPFLLRRLKSDVEKGLPPKKETILK-VGMSEMQKQYYRALLQKDLEVVNAGGERK 547 Query: 432 ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRV 491 L I + L G ++ Sbjct: 548 RLLNIAMQLRKCCNHPYLFQGAEPGPPYTT-------------------GDHLIENAGKM 588 Query: 492 EWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAW 549 L L R +VL+ LE L + G + +RD + Sbjct: 589 VLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYK-GYQYCRIDGNTGGEDRDASIEA 647 Query: 550 FAEEDTG-AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 F + + LL + G G N A ++++D +NP + Q R RIGQ ++Q+ Sbjct: 648 FNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQV 707 Query: 609 HVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDS--VYNDLI-------NYLASPDQ 659 E T + ++ ++ L GR ++L+ + S Sbjct: 708 FRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGAEMVFSSKD 767 Query: 660 TEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGG-EKAQALAESIEEQDDDTNLIAF 718 + D+ I + E AQL+ + E + L + +++D++ Sbjct: 768 STITDEDIDRIIAKGEEATAQLDAKMKKFTEDAIKFKMDDTAELYDFDDDKDENKLDFKK 827 Query: 719 AMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSED 757 + I ++ +R N L P + Sbjct: 828 LVTDNWIEPTSRRERKRNYSESDYFKQALRQGAPAKPRE 866 >UniRef50_D0NE95 Chromodomain protein, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NE95_PHYIN Length = 1748 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 112/651 (17%), Positives = 197/651 (30%), Gaps = 83/651 (12%) Query: 81 LTYIGTRLDTE-ESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQ 139 + Y+ D E L + R I A R + Sbjct: 658 IKYLVKWRDMSYVDCTWEWEDQLTDDRKIAA-FHRFNHPPIINGAHPATYSDVRPEPNTW 716 Query: 140 FRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLS 197 + S + + +L +QL + + +LADE+GLGKT++A IL Sbjct: 717 AKYLESPVYNNQNTLRSYQLEGLNWMTFCWYNRRNCILADEMGLGKTVQATSILEHLRQR 776 Query: 198 G-AAERVLIIVPETLQHQWLVEMLRRFNLRFALFD---DERYAEAQHDAYNP-------- 245 L++ P W E+ ++ ++ A Sbjct: 777 EFIRGPFLVVAPLATLGNWKREIETWTSMNCVVYHDSEGGSDIRAFIREQEFHFASEAHR 836 Query: 246 ---FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 +++ S E L W +V+DEAH L ++ ++ Q + Sbjct: 837 KRGIYKFNVLVTSYQTLMMDA---EFLESIHWRYIVIDEAHKL---KNREAKLLQVLHGF 890 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 LL+T TP Q G+ + L ++P++F +F +E + Sbjct: 891 TWDS--CLLMTGTPLQNGVFELWCLLNFIEPDKFPSQQEFYDEFGDLNTAEQVAQ----- 943 Query: 363 NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR 422 + EQ +L+ D E + ++E + ++ + +R Sbjct: 944 --------------LHEQLRPYMLRRVKEDVEKSIPPKEETIVD-VELTTMQKKYYRAIF 988 Query: 423 NGVKGFPK-------RELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ 475 + F L +++ L + G+ D M Sbjct: 989 ERNRQFLNMGATGTVANLVNVEMELRKCCNHPFLIRGVEDKECVGFDEQLRM-------- 1040 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQVLREREGIRAAV 533 + L LT R + KVL+ +E + + R G Sbjct: 1041 ------KILIQASGKTVLLDKLLTKFRQENKKVLIFSQFKIMLDIIEDMCQLR-GYSMER 1093 Query: 534 FHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQ 592 + R A F D+ LL + G G N AS +++FD +NP Q Sbjct: 1094 LDGSVRGNSRQAAIDRFNSPDSDTFAFLLSTRAGGVGINLIAASVVILFDSDWNPQNDLQ 1153 Query: 593 RIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYND--- 649 + R RIGQ + I+ +KT ++ + + L TG + D Sbjct: 1154 AVARCHRIGQTQSVNIYRLVTKKTYEAQMFEIASKKLGMHHAVFETGGVRNEFDGEDDSS 1213 Query: 650 --------LINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIH 692 L G ++ EQ +A E D LL+ Sbjct: 1214 GNMMSLMSLDRDKVEMMIRYGAYAIMGEEDEQDPDNRAINELDIDHLLQTS 1264 >UniRef50_B9HV84 Chromatin remodeling complex subunit n=11 Tax=Embryophyta RepID=B9HV84_POPTR Length = 1132 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 115/678 (16%), Positives = 220/678 (32%), Gaps = 48/678 (7%) Query: 73 EVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI-DRMDRFALRYR 131 + K +G+ + D+ E + E LD+ D D ++ Sbjct: 338 DSKHSDGIEPLRDSEADSPELDASRNESELDTYPEEDVIIDSNLNDDTGDLLEGQRQYNS 397 Query: 132 ARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIEAGM 189 A E L+G L +QL + + +LADE+GLGKTI+ Sbjct: 398 AIHSIQEMVTEQPYILKGG--QLRSYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIS 455 Query: 190 ILHQQLLS-GAAERVLIIVPETLQHQWLVEMLRRFN---LRFALFDDERYAEA-QHDAYN 244 ++ G LI+ P+ + W+ E + ++ L+D + + Sbjct: 456 LIAYLKEKKGVCGPHLIVAPKAVLPNWINEFSTWISEAEIKAFLYDGCLEERKAIREQLS 515 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAE 304 Q++I D R K L + +W ++VDE H L ++ + I Sbjct: 516 REGNLQVLITHYDLIMRDKA---FLKKIQWQYMIVDEGHRL---KNHECALAKTIG--GY 567 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNK 364 + LLLT TP Q ++ ++ L L P+ F+ +F E V+ Sbjct: 568 QMKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSEDKFEEWFNAPFADRGEVS------- 620 Query: 365 LSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG 424 L+++E ++ + +L+ ++ E + +++ D +V + Sbjct: 621 LTDEEQLLIIRRLHNVIRPFILRRKKNEVEKYLPGKTQVLLKC-DLSAWQKVYY----QQ 675 Query: 425 VKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG-DNAT 483 V + LHT + +++ +P ++ Sbjct: 676 VTEMGRVGLHTGSGKSKSLQNLTMQLRK-------------CCNHPYLFVGDYNMWRKDE 722 Query: 484 WWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSII 541 + E L L +VL+ LE L+ + + Sbjct: 723 IMRASGKFELLDRLLPKLHATDHRVLLFSQMTRLMDILEIYLQLHD-YKYLRLDGSTKTE 781 Query: 542 ERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI 600 ER F D+ LL + G G N Q A +++FD +NP + +Q R RI Sbjct: 782 ERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRI 841 Query: 601 GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT 660 GQ ++++ V + + V++ + G S D + L Sbjct: 842 GQKKEVRVFVLVSVGSVEEVILERAKQKKGIDAKVIQAGLFNTTSTAQDRKDMLEEIMHR 901 Query: 661 EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 E+ A Q R+ E K + + E+ + A Sbjct: 902 GTSSLGTDVPSEREINRLAARSQEEFRIFEDMDKDRRKKEDYRSRLMEEHEVPEWAYQAP 961 Query: 721 NLFDIIGINQDDRGDNMI 738 + + + ++ Sbjct: 962 DNKEDKAKGFEQNSTGVL 979 >UniRef50_A4S9B5 Predicted protein n=2 Tax=Ostreococcus RepID=A4S9B5_OSTLU Length = 589 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 105/594 (17%), Positives = 207/594 (34%), Gaps = 48/594 (8%) Query: 151 RTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVP 208 S+ +QL + + ++ +LAD++GLGKT++ L G L+I P Sbjct: 19 GGSMRDYQLKGVNWMISLYQNGLNGILADQMGLGKTVQTIGFLSHLRSKGVLGPYLVIGP 78 Query: 209 ETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAY------NPFDTEQLVICSLDFARR 261 + W+ E R + L+ R A+ +++ S + Sbjct: 79 LSTLSNWVSEFQRWTPSIPVLLYHGTRQERAEKRIEFLPTSTPIKPDFPVIVTSYEVVMA 138 Query: 262 SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGM 321 + + L + + LVVDE H L ++ + + ++ + LLLT TP Q + Sbjct: 139 DR---KFLAKYNFKYLVVDEGHRL---KNFDCKLIRELKYIP--TANKLLLTGTPLQNNL 190 Query: 322 ESHFARLRLLDPNRFHDFAQFVEEQKNYRPV-ADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 ++ L L P+ F +QF + D +K + + + Sbjct: 191 PELWSLLHFLLPDVFSSLSQFQSWFDFADNIGNDESQEQEVVDKNEQEHRARVVSKLHGI 250 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPL 440 LL+ D E + ++E++ L+ K F ++ + Sbjct: 251 LRPFLLRRLKGDVELSLPRKKEIL------------LYAQMVPKQKEFNDALVNKTITEM 298 Query: 441 PTQYQTAIKVS-GIMGARKSAEDRARDMLYPERIYQEFEGD-----NATWWNFDPRVEWL 494 T++ + G ++ +P+ I +G +++ L Sbjct: 299 LTKFAGNSHIPVGHTAVNNMLMQLRKNCNHPDLITGGLDGSIMFPSADELVEQCGKMQLL 358 Query: 495 MGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAE 552 +T R KVL+ LE ++R G + +R A F E Sbjct: 359 DRLMTRLRARGHKVLIFSQMTRMLDLLESFFQQR-GEPVCRIDGSVKQDDRREFIARFNE 417 Query: 553 EDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPY 612 + LL + G G N ++++D +NP Q + R+ RIGQ + ++ Sbjct: 418 DPKYGIFLLSTRAGGLGINLTGGDTVIIYDSDWNPHQDLQAMDRVHRIGQTKPVHVYRLA 477 Query: 613 LEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYN------DLINYLASPDQTEGFDDL 666 K+ + +++ L + G + + D + L + +D Sbjct: 478 TAKSVEGKMLKKAASKLALEKLVVTNGGFKQEKNDDGRAFGADELMALLKGETGANDEDS 537 Query: 667 IKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 ++ + L+ L++ RD L EI N E IE++ + L + Sbjct: 538 PQSANISDKDLEIILDR-RDLLGEIPPNPPRGIG--FEEIEDRSGMSLLGNVSE 588 >UniRef50_B6AJZ0 SNF2 family helicase, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AJZ0_9CRYT Length = 1313 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 111/553 (20%), Positives = 203/553 (36%), Gaps = 37/553 (6%) Query: 151 RTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIV 207 L+P+Q+ + + +LADE+GLGKTI+ +L LI+V Sbjct: 491 GGELLPYQIVGVEWMLSLYNNNLHGILADEMGLGKTIQTIALLTYLYEHKNNYGPHLIVV 550 Query: 208 PETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRL 266 P + WL E +L+ F RY + + + DF R K L Sbjct: 551 PLSTLPNWLKEFNIWSPSLKLLCFKGNRYERKNLIRELRLMKFNICLTTFDFVIREKNIL 610 Query: 267 EHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFA 326 + + W ++VDE H L +++ S+ + + +LLT TP Q + ++ Sbjct: 611 QTIS---WKHVIVDEGHRL---KNSKSKFHIVLHDF--QSKNRILLTGTPLQNNINELWS 662 Query: 327 RLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLL 386 L L P FH F ++ +L+ +E + + LL Sbjct: 663 LLNFLLPKVFHSVEDFENWFNRP---FSELSSSENQIELTEEEKLFIINRLHSILRPFLL 719 Query: 387 QAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQT 446 + SD ++E + M+ RV++ + K ++ + K+ + T Sbjct: 720 RRVKSDVLQDLPEKREYIIR-MELTPWQRVVYGQIKQ--KAVHSMDISSGKIQYRSVSNT 776 Query: 447 AIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQ 504 +++ I+ +P E+ N + + E L + Sbjct: 777 IMQLRKIV-------------NHPYLFVDEYFARNDDIFKVSCKFEILDRMIPKLVYFKH 823 Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTG-AQVLLCS 563 KVL+ C L L R+ I M+I ER F + D+ +L + Sbjct: 824 KVLIFCQMTQLMDILGDFLDYRD-ISYYRLDGTMNIQERKEKMDIFNDPDSNTFVFMLST 882 Query: 564 EIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVR 623 G G N Q A +++FD +NP Q R R+GQ +++++ + ++++ Sbjct: 883 RAGGLGLNLQAADTVIIFDSDWNPHQDLQAQSRAHRMGQKNEVRVFRLVSISGVEELVLK 942 Query: 624 WYHEGLDAFEHTCPTGRTIYDSVYNDL-INYLASPDQTEGFDDLIKNCR-EQHEALKAQL 681 + LD + G+ + +D + L E FD IK + L A+ Sbjct: 943 RAQKKLDIDQKIIQAGKFNSTEIPDDSHEDSLRELFGKEEFDSNIKITTPSELNRLLARN 1002 Query: 682 EQGRDRLLEIHSN 694 E+ + E+ Sbjct: 1003 EKELQKYEEMDKK 1015 >UniRef50_Q54CF8 Chromo domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q54CF8_DICDI Length = 3071 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 90/501 (17%), Positives = 177/501 (35%), Gaps = 41/501 (8%) Query: 151 RTSLIPHQLNIAHDVGRRHA--PRVLLADEVGLGKTIEAGMILHQQLLS-GAAERVLIIV 207 SL Q+ + LLADE+GLGKTI++ L S G L++ Sbjct: 895 NLSLKEFQVEGFLWLSYCWYHCRSSLLADEMGLGKTIQSIAFLQYLSQSVGIKGPFLVVA 954 Query: 208 PETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDT----EQLVICSLDFARRSK 263 P + W E+L+ ++ +F + Y ++++ + + Sbjct: 955 PLSTLGNWHKEILKWTKMKTLVFYGSQETRGFISKYEFKHKDTYLFEVLLTTYETIMSDH 1014 Query: 264 QRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMES 323 W L++DE H + ++ S+ ++ + ++LT TP Q M+ Sbjct: 1015 ---SSFVRVPWRALILDEGHRI---KNDKSKVLSKLKSI--KTEHSIILTGTPLQNDMKE 1066 Query: 324 HFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIE 383 + L LDP++F+ +F++E + + + + + Sbjct: 1067 LWTMLNFLDPDKFNSCQEFLDEYSDLKEESQV-------------------SKLHQLLSP 1107 Query: 384 PLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQ 443 LL+ D E + ++E V ++ T + +R + F R + K LP Sbjct: 1108 YLLRRMKEDVELSIPIKEETVIQ-VELSSTQKTYYRAILERNREFLSRGIKQ-KTNLPKL 1165 Query: 444 YQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR- 502 I++ + ++ E+I + E ++ + L + Sbjct: 1166 SNIMIQIRKVCNHPFLIPGAEESIVKQEKIAGD-EELGELLVKSSSKLVLVDKLLQRLKA 1224 Query: 503 -SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEED-TGAQVL 560 +VL+ + LE L+ RE + R + F ++ L Sbjct: 1225 EGHQVLIFSQMVESLNILEDYLQYRE-YTYERLDGSIKSEVRQASIDRFQDKGANRFVFL 1283 Query: 561 LCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSV 620 L + G G N A +++FD +NP Q R RIGQ ++++++ T + Sbjct: 1284 LSTRAGGVGINLTTADTVILFDSDWNPQSDLQAQARCHRIGQTNNVKVYRLITRNTYEEY 1343 Query: 621 LVRWYHEGLDAFEHTCPTGRT 641 L + L T + Sbjct: 1344 LFECATKKLLLDHIVLSTNKD 1364 >UniRef50_A2F9K3 F/Y-rich N-terminus family protein n=1 Tax=Trichomonas vaginalis RepID=A2F9K3_TRIVA Length = 1639 Score = 510 bits (1315), Expect = e-143, Method: Composition-based stats. Identities = 117/710 (16%), Positives = 229/710 (32%), Gaps = 82/710 (11%) Query: 70 QVEEVKEENGLLTYIGTRLDTEESGVA------LREVFLDSKLVFSKPQDRLFAGQIDRM 123 ++ + +G Y+ D + L L S+ P D + Sbjct: 171 KILAHRTVDGKSEYLVLWTDLDREDATWEDENSLDCKDLISEYNTPPPADECQNRPKGPL 230 Query: 124 DRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGL 181 F + + L +QL+ + + ++ADE+GL Sbjct: 231 SDFK-------------PVSVAPKSKSGKVLYKYQLDGLNFLIHSWFKNNNAIIADEMGL 277 Query: 182 GKTIEAGMILHQQ-LLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH 240 GKT + L LI+VP + W E+ +L+ + + Sbjct: 278 GKTAQVSTFLDFLNKSQKIFGPFLIVVPLSTLDHWYRELTDWTDLKVLILRGTKIERQLI 337 Query: 241 DAYNPFD------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSR 294 + Q+++ + + A +SK E EW +LV DEAH L + S+ Sbjct: 338 FENELYYEGTEIPRFQIMLTTGEIALKSKTVFEQF---EWQVLVFDEAHRL---KSHTSK 391 Query: 295 EYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVAD 354 A+++ +L+T TP Q + F L +DP F D +F E + Sbjct: 392 LLLAVKEF--KSQYKVLMTGTPLQNNIGELFTLLNFIDPQLFDDRTKFSESFADLSEKKQ 449 Query: 355 AVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTS 414 V + E +L+ D E +E++ + Sbjct: 450 IVE-------------------LKELIEPFMLRRLKGDVEKKLIPLEEIIIEC-GMTKSQ 489 Query: 415 RVLFRNTRNGVKGFPKRE-------LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDM 467 R +R + F R L+ I + L ++G A + + + Sbjct: 490 REYYRAVFTKNQEFLTRCEKRRLANLNNISMELRKVCNHPYLITGAEDAILIEKMQQLGL 549 Query: 468 LYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLRE 525 + + T ++ + L + + +VL+ L+ +L Sbjct: 550 KERTNEF-----ELETLIRTSGKLILVDKLLANLKKEGHRVLIFSQMTKMLDLLQDMLTY 604 Query: 526 REGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPF 585 R + + +R + F E++ LLC+ G G N A +++D + Sbjct: 605 R-NYKYRRIDGTVRGKDRQASIDDFQEQEDIFVFLLCTRAGGVGINLTSADRCIIYDSDW 663 Query: 586 NPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDS 645 NP Q R RIGQ +++++ + + + + + L + D+ Sbjct: 664 NPQNDIQATARCHRIGQTKEVKMYRLITKNSYERSMFDTASKKLGLDKAILENDTEHKDA 723 Query: 646 VYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAES 705 +L + DD N + E + A +E+ + + S G+ + + Sbjct: 724 --KELEKMIKIGAYHAFEDDENANEINEDEDINAIIERSEKHIHDPSS--GQSFSKIQFN 779 Query: 706 IEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLS 755 I E+++D +FD + G+ +D M Sbjct: 780 ITEKEED-------TKIFDDPNFWKKYLGETPEQNPETDIMPERRLKKTQ 822 >UniRef50_A2FNE0 SNF2 family N-terminal domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2FNE0_TRIVA Length = 1366 Score = 510 bits (1315), Expect = e-143, Method: Composition-based stats. Identities = 94/555 (16%), Positives = 190/555 (34%), Gaps = 44/555 (7%) Query: 148 RGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQ-LLSGAAERVL 204 + SL +Q+ + + + +L DE+GLGKT + L+ L Sbjct: 236 SKDKFSLRDYQVIGVNWLRFCYYNKRNSILGDEMGLGKTAQIVSTLNILSKDENINGPFL 295 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNP------------FDTEQLV 252 II P + W E + NL ++ + + F ++ Sbjct: 296 IIAPLSTLPHWQSEFKKWSNLNSIIYHGSPESLQIINDTEIRVKDDKGKSLKGFVGFDVL 355 Query: 253 ICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLL 312 I + D + L E +W LVVDE H L ++ S Y+ ++ + LL Sbjct: 356 ITNYDTVVNQSKE---LQEIDWQYLVVDEGHRL---KNRNSLLYKTLQLF--NFVHCTLL 407 Query: 313 TATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY--RPVADAVAMLLAGNKLSNDEL 370 T TP Q ++ ++ L +D F+ +F E+ N D + L+ L + Sbjct: 408 TGTPIQNNVDELYSLLSFIDKENFNSSEEFDEKFGNMTNSEQVDELKKLIKPYILRRHKS 467 Query: 371 NMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPK 430 ++ ++ + + ++ + ++ E +LM + + + Sbjct: 468 DVDNSILPKTETIIDVELTRQQKKIYKALISENREVLMKKLTKNSI-------------- 513 Query: 431 RELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP--ERIYQEFEGDNATWWNFD 488 L+++ L + G + D ++ + + + N Sbjct: 514 PSLNSLATELRKVCNHPYLIKGAEDSILEEFQNKFDKNSIKSDKNLTKSDIEIEAMINCS 573 Query: 489 PRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRA 546 ++ + L + ++KVL+ LE LR + +R A Sbjct: 574 GKLILIDKLLPKLKQKNEKVLIFSQWTHILDILEDYLRY-ISFNYERLDGSVKPSDRQTA 632 Query: 547 AAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 F + L+ ++ G G N AS +++FD +NP Q R RIGQ ++ Sbjct: 633 IDRFKDNANSFVFLISTKAGGVGINLTTASTVILFDSDWNPQNDLQAEARCHRIGQTKEV 692 Query: 607 QIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDL 666 +++ T +S +V + + + D + I + + F Sbjct: 693 KVYRLVTRNTYESKMVEVSCKKMFLEHVIFDGLNSNSDKLSAKEIEEMLRTGINDIFGSD 752 Query: 667 IKNCREQHEALKAQL 681 K + E+ Q+ Sbjct: 753 DKEVDKFCESDIDQI 767 >UniRef50_B9HP20 Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HP20_POPTR Length = 1748 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 127/712 (17%), Positives = 244/712 (34%), Gaps = 75/712 (10%) Query: 39 ENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALR 98 E+ Y RS TR D +M ++ +K+ + + I R+ + SG + Sbjct: 496 EDVRYRRS---FTREEIEVNDV-----SKEMDLDLIKQNSQVERIIADRITKDSSGNVVP 547 Query: 99 EVFLDSK----LVFSKPQDRLFAGQIDRMDRFALRYRAR--------------KYSSEQF 140 E + + + +D A D +D + R A K S + Sbjct: 548 EYIVKWRGLSYAEATWEKDVDIAFAQDAIDEYKAREAAIAVQGKMVDLQRKKGKASLRKL 607 Query: 141 RMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVGLGKTIEAGMILHQQL-LS 197 LRG + L +QL + + V+LADE+GLGKT+++ +L Sbjct: 608 DEQPEWLRGGK--LRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 665 Query: 198 GAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSL 256 + L++VP + W E + ++ ++ R + + F ++ + Sbjct: 666 QISGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTRASRERVGQPIKFSA---LLTTY 722 Query: 257 DFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATP 316 + + K L + +W+ L+VDEAH L +++ ++ Y + + + LL+T TP Sbjct: 723 EVVLKDKAV---LSKIKWNYLMVDEAHRL---KNSEAQLYTTLLEFS--TKNKLLITGTP 774 Query: 317 EQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEM 376 Q +E +A L LDP++F FV KN + L + ++ ++ Sbjct: 775 LQNSVEELWALLHFLDPDKFRSKDDFVHNYKNLSSFNENELANLHMELRPHILRRVIKDV 834 Query: 377 IGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTI 436 E+ + P ++ + +++ +++R+ F + GV+G + L I Sbjct: 835 --EKSLPPKIERILRV--EMSPLQKQYYKWILERN------FHDLNKGVRG-NQVSLLNI 883 Query: 437 KLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMG 496 + L D Y I ++ L Sbjct: 884 VVELKKCCNHPFLFESA------------DHGYGGDISTNDSSKLERIILSSGKLVILDK 931 Query: 497 YLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEED 554 L +VL+ + Q + R G + R +A F Sbjct: 932 LLVRLHETKHRVLIFSQMVRMLDIIAQYMSLR-GFQFQRLDGSTKAELRQQAMEHFNAPG 990 Query: 555 TGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYL 613 + LL + G G N A +++FD +NP Q + R RIGQ + I+ Sbjct: 991 SDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVT 1050 Query: 614 EKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQ 673 K+ + ++ + + L ++L R Sbjct: 1051 SKSVEEDILERAKKKMVLDHLVIQKLNA-----EGRLEKKETKKGSYFDKNELSAILRFG 1105 Query: 674 HEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDI 725 E L + + + S ++ AE +EE++ + F Sbjct: 1106 AEELFKEDRNDEESKKRLLSMDIDEILERAEKVEEKEAGGEQGNELLGAFKA 1157 >UniRef50_A2DTG9 F/Y-rich N-terminus family protein n=1 Tax=Trichomonas vaginalis RepID=A2DTG9_TRIVA Length = 1247 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 112/639 (17%), Positives = 210/639 (32%), Gaps = 66/639 (10%) Query: 148 RGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQ-LLSGAAERVL 204 S+ +QL+ + + +LADE+GLGKT++ + L+ L L Sbjct: 162 SKSGFSVRNYQLDGLNFLMNCWCNHRNAILADEMGLGKTLQVSVFLNTLNKLKKIRGPFL 221 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDT------EQLVICSLDF 258 IIVP + W E+ +L LF +Y Y + Q+++ + D+ Sbjct: 222 IIVPLSTIGHWEQELEEWTDLHCTLFCFNKYRREICKTYEFYFENTRIPIFQVLLTTYDY 281 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 R E W+++V DEAH + +++ S+ Q ++ L LLLT TP Q Sbjct: 282 ITREN---ELFSGVNWEVIVCDEAHKM---KNSNSKLMQNMKNL--KSKFKLLLTGTPIQ 333 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIG 378 ++ L ++P +F +F E+ + + Sbjct: 334 NSTPELWSLLNYINPEKFESLEEFQEKFGTVNESSQ-------------------ISQLN 374 Query: 379 EQDIEPLLQAANSDSEDAQSARQELVSML----MDRHGTSRVLFRNTRNGVKGFPKRE-- 432 +L+ SD E + + +E++ + ++ V RNT ++G K+ Sbjct: 375 SILKPIMLRRVKSDVEKSLTPIEEIIIECKMTDVQKYYYRSVFTRNTVFLLRGTEKKTPN 434 Query: 433 -LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRV 491 L I + L + G ++ E + ++ Sbjct: 435 FLMNITMELRKVCNHPYLIQGAEENIMRDLNKT----------GEIKTIQDGLIRSCGKM 484 Query: 492 EWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAW 549 L L +VL+ ++ L + GI+ + ER A Sbjct: 485 ILLDKLLDRLLPEGHRVLIFSQFTLILDIIQDYLNLK-GIKYVRLDGNVRGPERQAAIDN 543 Query: 550 FAEEDTG-AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 F+ + + LL + G +G N A ++++D +NP Q R RIGQ +++ Sbjct: 544 FSRDGSDIPIFLLTTRAGGQGINLTAADTVIIYDSDWNPQNDIQATARCHRIGQTKSVKV 603 Query: 609 HVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIK 668 + + + + L + L+ A D K Sbjct: 604 YRFLTSNSYERSMFDIASRKLGLDHAVLEGSSKERSENLDKLLRLGAYYQFYSNDSDDNK 663 Query: 669 NCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLF----- 723 E + + A ++ R GGE + E + + +F L Sbjct: 664 FASEDIDDIIAHSQRIR----HESVFGGEGSTFSNAQFEVNEAELEAPSFWKKLLVDIGD 719 Query: 724 DIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITIT 762 D G + + + + F IT Sbjct: 720 DDAGESIEQAIADSWTKKKFKRLRNTFFDFGYGRWKRIT 758 >UniRef50_Q7G8Y3 Probable chromatin-remodeling complex ATPase chain n=9 Tax=Eukaryota RepID=ISW2_ORYSJ Length = 1107 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 108/638 (16%), Positives = 200/638 (31%), Gaps = 70/638 (10%) Query: 142 MPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLL-SG 198 S ++G + +QL + + R + +LADE+GLGKT++ +L G Sbjct: 222 SQPSCIKG---KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRG 278 Query: 199 AAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEA-QHDAYNPFDTEQLVICSL 256 +++ P++ W+ E+ R LR F + + + S Sbjct: 279 ITGPHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPGKFDVCVTSF 338 Query: 257 DFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATP 316 + A + K L W +++DEAH + ++ S + + + LL+T TP Sbjct: 339 EMAIKEKT---TLKRFSWRYIIIDEAHRI---KNENSLLSKTMR--IYNTNYRLLITGTP 390 Query: 317 EQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEM 376 Q + ++ L L P F F E + + + Sbjct: 391 LQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ----------------QEVVQQ 434 Query: 377 IGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG-----VKGFPKR 431 + + LL+ SD E ++E + + + +R G ++ Sbjct: 435 LHKVLRPFLLRRLKSDVEKGLPPKKETILK-VGMSQMQKQYYRALLQKDLEVINAGGERK 493 Query: 432 ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRV 491 L I + L G ++ Sbjct: 494 RLLNIAMQLRKCCNHPYLFQGAEPGPPYTT-------------------GEHLVENAGKM 534 Query: 492 EWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAW 549 L L R +VL+ LE L R G + +RD + Sbjct: 535 VLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYR-GYQYCRIDGNTGGEDRDASIEA 593 Query: 550 FAEEDTG-AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 F + + LL + G G N A +V++D +NP Q R RIGQ ++Q+ Sbjct: 594 FNKPGSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQV 653 Query: 609 HVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDS--VYNDLI-------NYLASPDQ 659 E T + ++ ++ L GR +DL+ + S Sbjct: 654 FRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDDLLQMVRFGAEMVFSSKD 713 Query: 660 TEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFA 719 + D+ I + E A+L+ + E A ++ ++ L Sbjct: 714 STITDEDIDRIIAKGEETTAELDAKMKKFTEDAIKFKMDDTAELYDFDDDKEENKLDFKK 773 Query: 720 MNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSED 757 + + I + +R N L P + Sbjct: 774 LVSDNWIEPPRRERKRNYSESEYFKQALRQGAPAKPRE 811 >UniRef50_A9VAE6 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VAE6_MONBE Length = 1288 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 118/708 (16%), Positives = 231/708 (32%), Gaps = 53/708 (7%) Query: 23 VAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLT 82 V R L + RL D + + S ++ ++++ E ++ Sbjct: 324 VKAKDRRAQLERERLEKERLRLLMDQDTEGYLRLLDEQKDSR--KRILLDKIDERMRVVN 381 Query: 83 YIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRM 142 + ++ A E + + + AG + + A K+ + + Sbjct: 382 KLI--DAHQQQERARDEGQVSDAATLAAAAESSNAGASEEVKAGAEAALKAKFDAHVVQE 439 Query: 143 ----PYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLL 196 + L G + L P+Q+ + + +LADE+GLGKTI+ +L + Sbjct: 440 DIEEQPTILVGGK--LKPYQMYGLRWLVSLYNNRINGILADEMGLGKTIQTIALLTYLVE 497 Query: 197 S-GAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVIC 254 + L+IVP W +E+ + +L + + +++ Sbjct: 498 KKNNSGPFLVIVPLATLSNWRLELAKWAPSLVTVAYRGNKVERRVFHQQIKDVRFNVLLT 557 Query: 255 SLDFARRSKQRLEHLC-EAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLT 313 + + + + L C W +++DE H + S++ + Q + P LLLT Sbjct: 558 TYEMIIKDRALLSKACFNISWRYMIIDEGHRMKNSKN---KLSQTLMHYFS-APRRLLLT 613 Query: 314 ATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNML 373 TP Q + ++ L + P+ F+ F A +L +E ++ Sbjct: 614 GTPLQNSLPELWSLLNFILPDVFNSSDTFDSWFSAP------FAETSENVELDAEEKQLI 667 Query: 374 GEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR-------------- 419 + + LL+ + E + E V + R L+ Sbjct: 668 ILQLHKILRPFLLRRLKKEVETQLPDKVEHVIKC-EMSALQRKLYVCMQKYGVIPSSTQS 726 Query: 420 ---NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQE 476 + + R L + + + + KS + + + Sbjct: 727 TSGSNMEALDATKARSLQNVVMQMRKLCCHPFLFKEVEQDLKSEL-----LRHEDAATAL 781 Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVF 534 + W ++E L + R ++L+ LE R R ++ Sbjct: 782 ANLNGLELWRTAGKLELLDHMIPKLRRFGHRILLFSQFTTMLDILEDYFRYRR-LKYCRM 840 Query: 535 HEGMSIIERDRAAAWFAEEDTGA-QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQR 593 +R F D+ +L + G G N Q A +V+FD +NP Q Sbjct: 841 DGTCGAAKRAELLHDFNAPDSDLEIFILSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQA 900 Query: 594 IGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINY 653 R RIGQ ++++ ++ + ++ E LD + G+ + ND Sbjct: 901 QDRAHRIGQTKEVRVFRLVTVQSVEERMLERAREKLDVDQQVIQAGKFNQTADENDTKKM 960 Query: 654 LAS-PDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 L Q DD I+ HE L L + + L E A Sbjct: 961 LLEIIQQANDDDDEIEAGVTDHEDLNRMLARSDEELEAFVQMDEEIAN 1008 >UniRef50_Q4SCU8 Chromosome undetermined SCAF14648, whole genome shotgun sequence. (Fragment) n=2 Tax=Tetraodon nigroviridis RepID=Q4SCU8_TETNG Length = 1491 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 99/662 (14%), Positives = 202/662 (30%), Gaps = 79/662 (11%) Query: 133 RKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHA--PRVLLADEVGLGKTIEAGMI 190 ++ + + L +QL+ + + V+LADE+GLGKTI+ Sbjct: 459 QRPRFVALKKQPPFIGDDNLQLRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISF 518 Query: 191 LHQQLLSG-AAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFD- 247 L L++VP + W E ++ ++ + + + Sbjct: 519 LSYLFHQHQLYGPFLLVVPLSTLTSWQREFETWAPDMNVVVYLGDVMSRKTVGRRSKVTP 578 Query: 248 --------------------------------TEQLVICSLDFARRSKQRLEHLCEAEWD 275 ++ + + + K L W Sbjct: 579 RVLFFRVVTFMLFPPPVKIRDYEWVNHQTKRIRFNALLTTYEILLKDKGV---LGNINWA 635 Query: 276 LLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNR 335 L VDEAH L ++ S Y+ + + LL+T TP Q ++ ++ L L P++ Sbjct: 636 FLGVDEAHRL---KNDDSLLYKTLMEF--RSNHRLLITGTPLQNSLKELWSLLHFLMPDK 690 Query: 336 FHDFAQFVEEQKNYRPVA-DAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSE 394 F + F ++ R ++ +L L + ++ + + + + + + Sbjct: 691 FDSWEDFEDDHGKGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMSAQQKQ 750 Query: 395 DAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIM 454 +S ++ R+ + L + TR GF I + L + + Sbjct: 751 FYKSVCLPSCRWILTRNY--KALAKGTRGSSSGFL-----NIVMELKKCCNHSFLIKQPE 803 Query: 455 GARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAK 512 +E ++ L LT R +VL+ Sbjct: 804 DGETET----------------YEEQLQAVVRGSGKLVLLDKLLTRLRERGNRVLIFSQM 847 Query: 513 AATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRN 571 L + L R+ + R +A F E + LL + G G N Sbjct: 848 VRMLDILAEYLT-RKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGIN 906 Query: 572 FQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDA 631 A +V+FD +NP Q R RIGQ + I+ + T + ++ + + Sbjct: 907 LASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVL 966 Query: 632 FEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEI 691 T +V + + ++L + E L + E LE+ Sbjct: 967 DHLVIQRMDTTGRTVLDSSSRN--TNSNPFNKEELTAILKFGAEELFKEAEGEESEPLEM 1024 Query: 692 HSNGGEKAQALAESIEEQDDDTNLIAFAM----NLFDIIGINQDDRGDNMIVLTPSDHML 747 + + ES + L++ + + +++ + Sbjct: 1025 DIDEILRLAETRESDQGSSATDELLSQFKVANFSTMEESTPELEEKSAREWDDIIPEDQR 1084 Query: 748 VP 749 Sbjct: 1085 RK 1086 >UniRef50_B7G2T7 Imitation switch isoform 1, alias nucleosome remodeling factor 140 kDa subunit n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G2T7_PHATR Length = 1023 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 104/608 (17%), Positives = 193/608 (31%), Gaps = 66/608 (10%) Query: 127 ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKT 184 L A+ + P+QL + + H +LADE+GLGKT Sbjct: 122 QLLKSAQSKRRVIRVDQQPSNLAPHCRMHPYQLEGLNWLIKLHDHGINGILADEMGLGKT 181 Query: 185 IEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQ--- 239 ++ +L G ++IVP+++ W+ E + ++ + + Sbjct: 182 LQTISLLAYLRESRGVRGAHMVIVPKSVVGNWIREFKKWCPSIKAIRMGGTKDERQKFVT 241 Query: 240 ----HDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 D +++ S + R K L W +++DEAH + ++ S Sbjct: 242 EDLPLDPNTGKRKFDVLVTSYEGLLREKG---KLSRIPWKYVIIDEAHRI---KNENSSL 295 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQK-----NYR 350 + + + LL+T TP Q + +A L L P+ F D QF E Sbjct: 296 SKVVRTM--KTEFRLLITGTPLQNNLRELWALLNFLMPDIFGDAEQFDEWFSLTDASGKE 353 Query: 351 PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDR 410 V + +L L + ++ + +++ + + E Q+ L Sbjct: 354 NVIKKLHTILRPFMLRRVKKDVATSLPPKKETKLYIGLTKMQQEWYVRCLQKDAHEL--- 410 Query: 411 HGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP 470 N + G + L + + L G Sbjct: 411 ------------NKLGGPDRNRLLNVLMQLRKVCNHPYLFDGAEQGPPYI---------- 448 Query: 471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREG 528 D W +++ + L + +VL+ C LE R + Sbjct: 449 ---------DGPHLWENSGKMQLMHKLLPKLQAKGSRVLIFCQMTRVLDILEDYFRLTK- 498 Query: 529 IRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNP 587 + RD F E + LL + G G N A ++++D +NP Sbjct: 499 LEYCRIDGNTDGERRDSQMDEFNAEGSSKFAFLLSTRAGGLGINLATADIVILYDSDWNP 558 Query: 588 DLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVY 647 + Q + R RIGQ +Q+ E T + ++ L GR + Sbjct: 559 QVDLQAMDRAHRIGQTKPVQVFRFVTEGTVEEKIIERADRKLFLDAAVIQQGR--LAEQH 616 Query: 648 NDLINYLASPDQTEGFDDLIKNC--REQHEALKAQLEQGRDRLLEIHSNGGEKAQALAES 705 + L G D ++ E + A + +G +R E+ + AQ + Sbjct: 617 SSLEKGDLMKMVRFGADQILSGTGGTYTDEDIDALIARGEERTTEMQAKLQTDAQHNLAN 676 Query: 706 IEEQDDDT 713 +D Sbjct: 677 FSLMAEDE 684 >UniRef50_A0C3B5 Chromosome undetermined scaffold_147, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0C3B5_PARTE Length = 1021 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 115/691 (16%), Positives = 251/691 (36%), Gaps = 60/691 (8%) Query: 64 HDGWQMQVEEVKEENGLLTYIGTRLD----TEESGVALREVFLDSKLVFSKPQDRLFAGQ 119 ++++++K E Y + T S L++ + KL + Sbjct: 23 AKKELLRIDDLKREQEKFLYKLSCEKPVKVTSVSKQELKDQQVSDKLSILFDEVEEEMDN 82 Query: 120 IDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIP-----HQLNIAHDVGRRH--APR 172 + + ++Y +K E +P + L+ Q + L +QL + + Sbjct: 83 LISKAKQYVQYINKKQGDENSSLPNTYLKTQPSILKKGKLTGYQLQGLNWLISMQEAGLN 142 Query: 173 VLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFD 231 +LAD++GLGKTI+ +L + LI+ P + W E+ + ++ Sbjct: 143 GILADQMGLGKTIQTIALLGFMKQFKNVSGPHLIVGPLSTIPNWERELSEWL-PKCSVLK 201 Query: 232 DERYAEAQHDAYNPFDT--EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSE 289 E +HD +++ S + +++ L + ++ L++DEAH L + Sbjct: 202 MMATEEWRHDFNKHLSKKDYDVIVASYECVINNERI---LNKYRFEYLIIDEAHKL---K 255 Query: 290 DAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY 349 + S + +++L+ LLLT TP Q ++ L L P F F + Sbjct: 256 NEESLFFTTLKRLS--SRFRLLLTGTPLQNNPHELWSLLNYLMPQLFTSSEAFDQWFYIN 313 Query: 350 RPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMD 409 + +++ + K + + + +I +L+ S+ ++E + + + Sbjct: 314 KLMSEKEILQEKYEKRNMNMIEKAKSIIQ----AFMLRRTKSEVALDIPPKKE-IHLYVQ 368 Query: 410 RHGTSRVLFRNT---RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARD 466 + +RN + V ++ L I + L Q Sbjct: 369 MTPLQKSHYRNMILNKKVVGVTTQKSLMNILIQLRKICQHLYMF---------------- 412 Query: 467 MLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLR 524 PE ++ +++ L +L + KV++ + LE L Sbjct: 413 ---PELEDRDQPSLGEHLIENSGKLKVLDMFLKKLYNENHKVILFSQFTSLLDILEDYLN 469 Query: 525 EREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDL 583 R+ + I RD F D+ LL + G G A ++++D Sbjct: 470 YRK-YKYCRLDGSTPIEVRDENIRNFQNPDSDLFIFLLSTRAGGLGITLTAADTVIIYDS 528 Query: 584 PFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIY 643 FNP L +Q + R RIGQ ++ ++ + T + ++ L + G + Sbjct: 529 DFNPQLDQQAMDRAHRIGQKKNVMVYRLICQSTVEEKIIERQQIKLRWEQMIIDKGHSQM 588 Query: 644 DSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALA 703 + N + T G ++K+ E ++ L++G + +++ ++ Sbjct: 589 VGMMNKKED--LKSIATYGASQILKDEPYTEEDIETLLKRGEELTEQLN----QQIDQKF 642 Query: 704 ESIEEQDDDTNLIAFAMNLFDIIGINQDDRG 734 + I+++ D L ++ +FD +++ Sbjct: 643 KIIKDKIDKVELGVKSIRVFDFFKDPNNEKD 673 >UniRef50_B8LC70 Chromodomain-helicase (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LC70_THAPS Length = 690 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 98/637 (15%), Positives = 193/637 (30%), Gaps = 79/637 (12%) Query: 99 EVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQ 158 + ++ ++P R + R Y ++ + + + L +Q Sbjct: 19 QEDINDDAAIAEPLKRHRNLKRSPPQRLNKSY--LQFRDKLYDPKVPHIYKDGHKLRDYQ 76 Query: 159 LNIAHDVGRRH--APRVLLADEVGLG---------KTIEAGMILHQQLL-SGAAERVLII 206 ++ + + + +LADE+GLG +T++ L L++ Sbjct: 77 VDGVNWLSSCYYKRTGAILADEMGLGAHPCLSLYPRTVQIVTYLEHLFRVEKLNGPFLVV 136 Query: 207 VPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD-----------TEQLVICS 255 VP + W E NL+ ++ D + + +++ + Sbjct: 137 VPLSTVEHWRREFEGWTNLQCCVYHDRQRVWRDVLREYEWYYEDRPHTPDYLKFNVLVTT 196 Query: 256 LDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEH------VPGV 309 D + + + W + VVDEAH L + + + +++++ Sbjct: 197 YDTLIGD---FDVIGDVPWRVTVVDEAHRLRNVKG---KLLECMKEISAKGTLKYGYQSR 250 Query: 310 LLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDE 369 +L+T TP Q + + L ++P+ F +F N A Sbjct: 251 VLMTGTPLQNNTQELWTLLNFIEPSLFQSLEEFEHNFGNMANREQVEA------------ 298 Query: 370 LNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFP 429 + + +L+ D A++E V ++ + +R F Sbjct: 299 -------LQHKISPFMLRRVKEDVAKDIPAKEETVID-VELTSIQKQYYRAIFEHNHAFL 350 Query: 430 KR--------ELHTIKLPLPTQYQTAIKVSGIM------GARKSAEDRARDMLYPERIYQ 475 +L I++ L + GI + + D PE + Sbjct: 351 SMGSSKAVAPKLMNIQMELRKCCNHPFLLDGIESREMEKRHEELSASGELDGKSPEEQHH 410 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAV 533 + ++ L L R KVL+ + RE R Sbjct: 411 ILNEYG--YVMSSGKMVLLDKLLPKLRQEGHKVLIFSQFVKMLDLISDYCDFRE-FRYER 467 Query: 534 FHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQR 593 + ER +A F E LL + G G N A ++FD +NP Q Sbjct: 468 LDGRVRGNERQKAIDRFETEKDSFVFLLSTRAGGVGINLTAADICIIFDSDWNPQNDVQA 527 Query: 594 IGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPT---GRTIYDSVYNDL 650 R RIGQ D+ I+ +T + + + L + T ++ Sbjct: 528 QARCHRIGQTKDVMIYRLVTSRTFEQEMFDRASKKLGLEQAVLGTFGQDEAEDKPTNKEM 587 Query: 651 INYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDR 687 L D+ + +E + R R Sbjct: 588 EQLLKRGAYALLEDENDEQGKEFVADDIENILAKRTR 624 >UniRef50_Q54CI4 Myb domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q54CI4_DICDI Length = 1221 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 99/593 (16%), Positives = 194/593 (32%), Gaps = 58/593 (9%) Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADE 178 D +S F ++ ++ +Q+ + + + + +LADE Sbjct: 245 DEAIMNETMEEEEPHSFNFFTSSPPYIKSG--TMRDYQVYGLNWLIQLYERGINGILADE 302 Query: 179 VGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYA 236 +GLGKT++ +L G LII P++ W E R LR F + Sbjct: 303 MGLGKTLQTISLLGYLSEYKGIRGPHLIIAPKSTLSGWAKEFTRWCPFLRVVRFHGSKEE 362 Query: 237 EAQ-HDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 F + I + + A R K + W +++DEAH + ++ S Sbjct: 363 REDIKKNQLIFKKFDVCITTYEVAIREK---STFKKFSWRYIIIDEAHRI---KNENSVL 416 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 + + + LL+T TP Q + ++ L L P+ F F + + Sbjct: 417 SKGVRMF--NSQFRLLITGTPLQNNLHELWSLLNFLLPDVFSSSDDFDKWFDLANNTENQ 474 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSM----LMDRH 411 + + + + LL+ ++ E + ++E+ M + Sbjct: 475 ---------------QEVIDKLHKVLRPFLLRRIKTEVEKSLPPKKEIKLFVGLSTMQKE 519 Query: 412 GTSRVLFRNTRNGVKGFP----KRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDM 467 R+L ++ V G + L I + L G + + D Sbjct: 520 WYKRLLSKDLDAVVVGAKGNTGRVRLLNICMQLRKACNHPYLFDGAEEEPYTTGEHLIDN 579 Query: 468 LYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLRERE 527 + + R +VL+ + LE + R Sbjct: 580 SGKMALLDKLLKKLK------------------ERGSRVLIFSQMSRMLDILEDYMLYR- 620 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFN 586 G + A I R+ + + + + LL + G G A +++FD +N Sbjct: 621 GYKYARIDGSTESIVRENSIENYNKPGSDLFAFLLTTRAGGLGITLNTADIVILFDSDWN 680 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSV 646 P + Q R RIGQ + ++ E + + +V L GR + + Sbjct: 681 PQMDLQAQDRAHRIGQTKPVTVYRFVTENSMEEKMVEKAEMKLQLDALVIQQGRLVEANK 740 Query: 647 YNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKA 699 LA K+ E + + L++G ++ +++S + A Sbjct: 741 NAKPEELLAMLRFGADDIFKSKSSTITDEDIDSILKKGEEKTEQLNSKVKDLA 793 >UniRef50_Q8RWY3 Putative chromatin-remodeling complex ATPase chain n=9 Tax=Eukaryota RepID=ISW2_ARATH Length = 1057 Score = 507 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 102/608 (16%), Positives = 193/608 (31%), Gaps = 65/608 (10%) Query: 151 RTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIV 207 + + +QL + + R + +LADE+GLGKT++ +L G +++ Sbjct: 186 QGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVA 245 Query: 208 PETLQHQWLVEMLRRFN-LRFALFDDERYAEA-QHDAYNPFDTEQLVICSLDFARRSKQR 265 P++ W+ E+ R LR F + + + S + A + K Sbjct: 246 PKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMAIKEKT- 304 Query: 266 LEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHF 325 L W +++DEAH + ++ S + + + + LL+T TP Q + + Sbjct: 305 --ALRRFSWRYIIIDEAHRI---KNENSLLSKTMRLFSTN--YRLLITGTPLQNNLHELW 357 Query: 326 ARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPL 385 A L L P F F E + + + + + L Sbjct: 358 ALLNFLLPEIFSSAETFDEWFQISGENDQ----------------QEVVQQLHKVLRPFL 401 Query: 386 LQAANSDSEDAQSARQELVSML----MDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLP 441 L+ SD E ++E + + M + +L ++ G ++ L I + L Sbjct: 402 LRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLR 461 Query: 442 TQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS- 500 G ++ L L Sbjct: 462 KCCNHPYLFQGAEPGPPYTT-------------------GDHLITNAGKMVLLDKLLPKL 502 Query: 501 -HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTG-AQ 558 R +VL+ LE L R G ERD + + + + Sbjct: 503 KERDSRVLIFSQMTRLLDILEDYLMYR-GYLYCRIDGNTGGDERDASIEAYNKPGSEKFV 561 Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ 618 LL + G G N A ++++D +NP + Q R RIGQ ++Q+ E + Sbjct: 562 FLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIE 621 Query: 619 SVLVRWYHEGLDAFEHTCPTGRTIYDS----VYNDLINYLASPDQTEGFDDLIKNCREQH 674 ++ ++ L GR ++L+ + + E Sbjct: 622 EKVIERAYKKLALDALVIQQGRLAEQKSKSVNKDELLQMVRYGAEMVFSSKDSTITDEDI 681 Query: 675 EALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRG 734 + + A+ E+ L E A + DD + F + D ++ Sbjct: 682 DRIIAKGEEATAELDAKMKKFTEDAIQF-----KMDDSADFYDFDDDNKDENKLDFKKIV 736 Query: 735 DNMIVLTP 742 + P Sbjct: 737 SDNWNDPP 744 >UniRef50_A2EPF9 Type III restriction enzyme, res subunit family protein n=1 Tax=Trichomonas vaginalis RepID=A2EPF9_TRIVA Length = 1439 Score = 507 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 98/608 (16%), Positives = 202/608 (33%), Gaps = 49/608 (8%) Query: 96 ALREVFLDSKLVFSKPQDRLFAGQIDRMD-RFALRYRARKYSSEQFRMPYSGLRGQRTSL 154 E + + + R Q R + E + +P R L Sbjct: 283 CTWEDEIQDNEAIADFERRNDISQYKEPRIALIQRPELFQLFGENYPLPPFP---TRREL 339 Query: 155 IPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQ 212 +Q++ + + R +LADE+GLGKT++ I++ G L+I P + Sbjct: 340 RDYQIDGINWLRRNWYNHRNCILADEMGLGKTVQGVNIIYDLYRIGDPGPFLVIAPLSTL 399 Query: 213 HQWLVEMLRRFNLRFALFDDERYAEAQHDAYN----PFDTEQLVICSLDFARRSKQRLEH 268 QW+ E L F +++ + D + E Sbjct: 400 DQWVREFKNWTPLNVVKFTGPGKEIIAKYELTYPNTDVPKFNVILTNPDVLIK---FDEI 456 Query: 269 LCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARL 328 W ++VDEAH L + ++ Y+ +E + ++ +LL+T TP Q ++ ++ L Sbjct: 457 FMNFCWHYVIVDEAHELR---NDETKRYKFMESM--NIQNLLLMTGTPIQNNLKELWSLL 511 Query: 329 RLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQA 388 L+D +F F++ + +A + + E +L+ Sbjct: 512 HLIDRAKFDSVESFMQLYDTEKDPQNA------------------TKRLQEDLKPYMLRR 553 Query: 389 ANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAI 448 D E + ++E + ++ ++L+R+ + + LP A+ Sbjct: 554 KKEDVEKSIGKKEETIVN-VELTRAQKMLYRSLIEQKIPELAASDSSHRRALPELPNLAM 612 Query: 449 KVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKV 506 ++ + +D + + + EF ++ ++ L +K+ Sbjct: 613 QLRKVCCHPYLIQDYEKIIGDVLQGMSEF----DQLVKCSGKMVFVDKLLGKLHPLGKKI 668 Query: 507 LVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEI 565 L+ + Q L R + G +R + F + LL + Sbjct: 669 LIFSQFKHVLDIISQFLDMR-NYKYERIDGGSHGNDRQKKMDRFNDPTQDIFVFLLSTRA 727 Query: 566 GSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD-IQIHVPYLEKTAQSVLVRW 624 G G N A +++FD +NP Q R RIGQ + + ++ T +S + Sbjct: 728 GGLGLNLTAADTVIIFDSDWNPQNDVQAQARCHRIGQTAEKVVVYRLITRGTYESEMFDR 787 Query: 625 YHEGLDAFEHTCP---TGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQL 681 + L + + +L N + + D + ++ Sbjct: 788 ASKKLGLDQAVLDHHANNESESKMDKEELENLIKRGAYYQLTDMNYEEGDNFTSQSIDEI 847 Query: 682 EQGRDRLL 689 R R+ Sbjct: 848 LDSRTRIF 855 >UniRef50_A2EGL7 SNF2 family N-terminal domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2EGL7_TRIVA Length = 1497 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 108/692 (15%), Positives = 219/692 (31%), Gaps = 66/692 (9%) Query: 56 NPGDTITSHDGW----QMQVEEVKEENGLLT-----YIGTRLDTE-ESGVALREVFLDSK 105 + GD +T D Q++ + +E G L Y+ E + + + K Sbjct: 185 SIGDLLTFEDQEINQVWFQIDRIIDEKGDLEDNDLEYLVKWKGLEYDEATWEKAEEIKEK 244 Query: 106 LVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV 165 + Q+ L ++ R A+++ + L +QL + + Sbjct: 245 DKIKEYQEHLKIANPKKIPSRWKRPSAKEFKELEESPK----SKHNYELRDYQLKGLNWL 300 Query: 166 GRRH--APRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRR 222 +LADE+GLGKT + +L L++ P + W E Sbjct: 301 RFCWYNKRNNILADEMGLGKTAQTVSMLESLRKYENVRGPFLVMAPLSTLPHWRNEFEEW 360 Query: 223 FNLRFALFDDERYAEAQHDAYNP------------FDTEQLVICSLDFARRSKQRLEHLC 270 +L ++ +++ + + + Sbjct: 361 SSLNTIVYHGNADCRELIRRSEFNCLNSKGKIIPNCVQFDVLVTNYETVLQD---FNVFA 417 Query: 271 EAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLR- 329 + EW ++ DEAH L +++ + Y+ +E L +LT TP Q ME + L Sbjct: 418 DIEWRYIIFDEAHKL---KNSKGKLYKKVETLT--FEHCTMLTGTPIQNNMEELWGLLHI 472 Query: 330 -LLD-PNRFHDFAQFVEEQKNYRPVAD--AVAMLLAGNKLSNDELNMLGEMIGEQDIEPL 385 +D PN F +F E+ N A ++ L+ L + ++ + +++ Sbjct: 473 LFIDQPNFF-TLEEFNEKYGNMTDSAQVKSIQKLIKPLMLRRKKSDVEQSIAAKEETIVR 531 Query: 386 LQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQ 445 ++ + + ++ E S L++ + G L I + L Sbjct: 532 VELTRTQKKFYRALLSENASTLLE--------------QITGSAANNLQNIAMQLRKVCN 577 Query: 446 TAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT--SHRS 503 + R E EG ++ ++ L + Sbjct: 578 HPYLLKNAEDTEVKERMADPANKGKSRDQIELEG----LVESSGKMVFISKLLPRLKEQG 633 Query: 504 QKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCS 563 KVL+ + L E + ++ +R A F ++ LL + Sbjct: 634 HKVLIFSQMVRVLGIISIFL-EANQYKYERLDGSVNDNDRQAAIDRFNQDPEAFVFLLST 692 Query: 564 EIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVR 623 + G G N A+ ++++D +NP Q R RIGQ ++++ T + + Sbjct: 693 KAGGVGINLTAANTVIIYDSDWNPQNDIQAEARCHRIGQTQKVKVYRLVTRATYEEKMYE 752 Query: 624 WYHEGLDAFEHTCPTGRTIYDS--VYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQL 681 + L G + ++ L + DD + + L Sbjct: 753 RASKKLGLDHVVLDGGDMSKEKPMKAKEIEEMLRNGVVNIFNDDNTQADEFTAADIDQIL 812 Query: 682 EQGRDRLLEIHSNGGEKAQALAESIEEQDDDT 713 ++ GG+ A A+ + D Sbjct: 813 DKRATTTFADVVAGGDSVFATAQFKADNDTLD 844 >UniRef50_C4Q8K7 Chromodomain helicase DNA binding protein, putative n=1 Tax=Schistosoma mansoni RepID=C4Q8K7_SCHMA Length = 1825 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 107/659 (16%), Positives = 203/659 (30%), Gaps = 63/659 (9%) Query: 142 MPYSGLRGQR-TSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLLSG 198 S L L +QL + + R R V+LADE+GLGKTI+ L Sbjct: 454 EQPSYLGRSEELRLRDYQLEGINWLVRAWTRRNSVILADEMGLGKTIQTIGFLSYLFNEH 513 Query: 199 AA-ERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFD--------- 247 LI+VP + W E+ + ++ + + + Sbjct: 514 QVYGPFLIVVPLSTISSWQKELQTWAPEMNTIIYTGDHVSRQLIREHEWSTGASNNRRHQ 573 Query: 248 --TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEH 305 + + + + + K L + W L VDEAH L ++ S+ Y+ ++ + Sbjct: 574 SLKFNVCVTTYEILLKDKGW---LSQVNWAFLGVDEAHRL---KNDSSQLYKTLKTFETN 627 Query: 306 VPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKL 365 LL+T TP Q M+ +A L + P+ F D+ +F + ++ + Sbjct: 628 T--RLLVTGTPLQNTMKELWALLHFIMPDCFPDWEEFEQTYS------------VSPDDP 673 Query: 366 SNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGV 425 +N + + + LL+ D E + + E + +D ++R Sbjct: 674 ANKMNSEAFHNLHKTLKPFLLRRVKKDVESSLPEKIEQILR-VDMTKEQANIYRLILARN 732 Query: 426 KGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWW 485 + K K + + L E + F + Sbjct: 733 YDGLLKVTRGHKASFINIVMELKKCCNHAHLIAPPSEVDQQYLTKEDRLRSFLKGSGKGT 792 Query: 486 NFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDR 545 D ++ L + +VL+ + L R G + R + Sbjct: 793 LLDKLLQRL-----KSKGHRVLIFSQMVRMLDLIADYLSLR-GWGFQRLDGSIRGEVRKQ 846 Query: 546 AAAWFA-EEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 A F E T LL + G G N A +++FD +NP Q R RIGQ Sbjct: 847 ALDHFNCEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQTK 906 Query: 605 DIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI---YDSVYNDLINYLASPDQTE 661 + ++ ++ + ++ + + + +L + Sbjct: 907 QVSVYRFVTRESVEEKIIESATRKMVLDHLVIQRMDSAGIRSGRRGDTAKGHLLTEILRY 966 Query: 662 GFDDLIKNCREQHEALKAQLEQGRDRLLEI---------------HSNGGEKAQALAESI 706 G + L K E L+ ++ +R S AL E Sbjct: 967 GAEGLFKQADEDATELEVDIDDILNRAETRDTEATVESNPANALLSSFKVVNLDALEEDT 1026 Query: 707 EEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITI-TFD 764 + ++ + +L + + V D + + + TF Sbjct: 1027 DIKNGNDSLNSSINTGCEKTWDQIIPSEFRGQVKAEQDRKTLVELELGPRRRRPVKTFQ 1085 >UniRef50_A7ARU3 Chromo-helicase DNA-binding protein, putative n=1 Tax=Babesia bovis RepID=A7ARU3_BABBO Length = 1729 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 113/698 (16%), Positives = 217/698 (31%), Gaps = 87/698 (12%) Query: 62 TSHDGWQMQVEEVKEENGLLTYIGTRLD------TEESGVALREVFLDSKL-VFSKPQDR 114 + ++ V E++G+ Y+ T E L E D + F + +DR Sbjct: 625 DALKAERIVTHYVDEDSGVDYYMVKWRSCTYDQCTYEDEKVLTEHGFDHLIKSFREREDR 684 Query: 115 LFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR-- 172 + +M K+ + R L +QL + + R Sbjct: 685 ICGEMAKKMPWNTHSLSLTKFEPYHDTPTFLANHETR-KLRDYQLIGVNWIVNRMKRGLS 743 Query: 173 VLLADEVGLGKTIEAGMIL-HQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNL-RFALF 230 VLLADE+GLGKT++ ++ H G L+IVP++ W+ E + Sbjct: 744 VLLADEMGLGKTVQTITLIGHFLYKEGLIGPYLVIVPQSTIDNWMREFETWLPQANVVCY 803 Query: 231 DDERYAEAQHDAYNPFDTE----------QLVICSLDFARRSKQRLEHLCEAEWDLLVVD 280 A + + + + + LE L W L+VVD Sbjct: 804 YGNAKAREIIRTFELARVHVPGKGERYRCDVCVTT-PSIINAAVDLEFLRRISWQLMVVD 862 Query: 281 EAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFA 340 EAH L ++ S+ + + Q LLL+ TP +E + L ++P + + Sbjct: 863 EAHQL---KNRNSKRFVELRQFM--ADYKLLLSGTPLHNNLEELWTLLHFINPQIYPYYE 917 Query: 341 QFVEEQKNYRPVA-----DAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSED 395 +F + A +L +L L + + + + + + + Sbjct: 918 EFRRRYADVENAAAIGENKQKQLLSLQQELHEMVLRRVKKDVEKSLPNKVERILR---VE 974 Query: 396 AQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMG 455 + E ++ R+ G + L I + L + Sbjct: 975 LSPMQVEWYRNILTRNYDQ-------LAKNSGGSRSSLQNICMELKKVCNHPFLCYEPVD 1027 Query: 456 ARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT--SHRSQKVLVICAKA 513 + + ++ L L R +VL+ Sbjct: 1028 RQSWLQ---------------------GLVYGSGKICLLDKLLARLKERGHRVLIFSQMV 1066 Query: 514 ATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNF 572 + + L R G + M R +A F + ++ LL ++ G G N Sbjct: 1067 RMLNIISEYLTMR-GFKHQRLDGTMGREVRKKAMDHFNDPNSDDFCFLLSTKAGGLGINL 1125 Query: 573 QFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAF 632 A ++++D +NP Q R RIGQ +QI+ + + + ++ + Sbjct: 1126 TTADTVIIYDSDWNPQNDLQAEARAHRIGQTKTVQIYRLVTKDSIEQTILERAKTKMVLD 1185 Query: 633 EHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRL---- 688 L DD C E L L+ G +L Sbjct: 1186 ALVVQG---------------LNKKGNAVVLDDANSKCGFSREELAKILKFGASKLWSKD 1230 Query: 689 LEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDII 726 + S K + + +++ ++ + D++ Sbjct: 1231 KTVTSQDVPKDENIDIDLDKVLEEAEVTNDDGLASDLL 1268 >UniRef50_A2DYG3 F/Y-rich N-terminus family protein n=1 Tax=Trichomonas vaginalis RepID=A2DYG3_TRIVA Length = 1587 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 114/691 (16%), Positives = 222/691 (32%), Gaps = 77/691 (11%) Query: 110 KPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH 169 D+ + ++ + + A ++ ++ S L +QL + + R Sbjct: 185 SDVDQESIKEFNKRNTKTEKIEAPPDPAKFEQLKESPKTESGLELFSYQLAGMNWLRHRW 244 Query: 170 APR--VLLADEVGLGKTIEAGMILHQ-QLLSGAAERVLIIVPETLQHQWLVEMLRRFNLR 226 +LADE+GLGKT++A L+ G LII P + WL E L Sbjct: 245 YNNTNCILADEMGLGKTVQAISFLNYAHTHEGLQTPFLIIAPLVTLYNWLREFNTWTKLN 304 Query: 227 FALFDDERYAEAQHDAYNPFD------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVD 280 ++ + A + ++I + + E + W L+VD Sbjct: 305 VVIYTGPKEARNTIREHEFNYEDGTGPKFDVLITNYELIINDT---EVFSQFNWSFLIVD 361 Query: 281 EAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFA 340 EA L ++ S+ + A+ + H +LLT TP Q +E + L L P F D Sbjct: 362 EAQRL---KNQNSKLFSALANV--HSDHRILLTGTPIQNTLEELVSLLEFLHPGEFQD-- 414 Query: 341 QFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSAR 400 L+ E + ++ LL+ SD + +A+ Sbjct: 415 ------------------------LTAAETAEDVFELRKKLEPHLLRRLKSDVDKTIAAK 450 Query: 401 QELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELH--TIKLPLPTQYQTAIKVSGIMGARK 458 +E + + ++++ F + H I + L V G + Sbjct: 451 KETIIEC-GMTKFQKQIYKDILESNARFLTKGAHCSNIAMELRKVCIHPYLVKGAE--ER 507 Query: 459 SAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATA 516 +D P + Q ++ + L + ++L+ Sbjct: 508 ILQDFPGANQNPSILLQAM-------IRASGKMILIDKLLPKLKSDGHRILIFSQMTNLL 560 Query: 517 LQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFA 575 LE L + G ++ + +R F E ++ V LL + G G N A Sbjct: 561 DILEDYLAMK-GYQSCRIDGKVKGEKRQGIIDKFNEPNSELFVCLLSTRAGGIGINLNSA 619 Query: 576 SHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHT 635 +++FD +NP Q R RIGQ +Q++ + T + + L Sbjct: 620 DTVIIFDSDWNPQNDLQAQARCHRIGQTKTVQVYRLLTKGTYEQTMFDSASRKLGLGHAI 679 Query: 636 CPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNG 695 N I+ L +D+ ++ E + ++ + Sbjct: 680 LDKMPP------NKEIDMLLRKGAYHLLNDVEEDN--FDEQDIEDILSKSKVMVYNEATS 731 Query: 696 GEKAQALAE-----SIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTP--SDHMLV 748 G ++A + S + +D + + ++ D + + M Sbjct: 732 GSFSKANFDLGDDSSQVDINDPNFWEKLLPQQQEPAVVEENLYDDGRMRTRHQKTQGMND 791 Query: 749 PDFPGLSEDGITITFDREVALAREDAQFITW 779 + P L + D + A + + W Sbjct: 792 EEDPALDDGTSR---DWKRAERDKLQHLLQW 819 >UniRef50_A8QAR1 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8QAR1_MALGO Length = 1053 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 147/960 (15%), Positives = 287/960 (29%), Gaps = 107/960 (11%) Query: 31 TLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDT 90 +L T NR + + R + G T M+ + E LL + Sbjct: 37 SLDASRTEMNRQKSIDS--LKRFSYLLGQTELFQHFIDMKKDRDPEFARLLDESTQKRGK 94 Query: 91 EESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQ 150 + G + D+ S + + + + + + FR + G Sbjct: 95 NKGGKNQGKSKGDA---ASDQRHHRKTEKEEDEELMQDENDDDEDNVFMFRESPGYVEGG 151 Query: 151 RTSLIPHQLNIAHDVGRRHAP--RVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIV 207 ++ +Q+ + + + +LADE+GLGKT++ L L++V Sbjct: 152 --TMKDYQIQGLNWLISLYHNGINGILADEMGLGKTLQTISFLGYLKHYRNTPGLHLVVV 209 Query: 208 PETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDT-EQLVICSLDFARRSKQR 265 P++ W+ E + R + +++ + + R K Sbjct: 210 PKSTLDNWVREFHKWVPGFRIVTLQGSKEERHALIHERILPQAFDVLVTTYEMCLREKPT 269 Query: 266 LEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHF 325 L+ L W+ +V+DEAH + ++ S Q + LL+T TP Q + + Sbjct: 270 LQKLS---WEYIVIDEAHRI---KNVDSALSQIVRAFTSRS--RLLITGTPLQNNLMELW 321 Query: 326 ARLRLLDPNRFHDFAQFVEEQKNYRPVADA----------VAMLLAGNKLSNDELNMLGE 375 + L L P+ F F + A ++ D + + Sbjct: 322 SLLNFLLPDVFSSADDFEAWFQRKGDTGAETSKADDADAIEAKPKDDHEDDADRHGSIVQ 381 Query: 376 MIGEQDIEPLLQAANSDSEDAQSARQELVSML----MDRHGTSRVLFRNTRNGVKGFPKR 431 + + LL+ +D E + ++E+ + M R +L ++ K+ Sbjct: 382 QLHKVLRPFLLRRVKADVEQSLLPKKEINVFVGLSDMQRKWYKSLLEKDIEAVNGALSKK 441 Query: 432 ----ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNF 487 L I + L G D Sbjct: 442 EGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD-------------------EHLVYN 482 Query: 488 DPRVEWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDR 545 +++ L L R +VL+ C + LE RE +R Sbjct: 483 SGKMDILDKLLRKMKERGSRVLIFCQMSRMLDILEDYCLFRE-YTYCRIDGSSVHEDRIA 541 Query: 546 AAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 A + D+ LL + G G N A +V+FD +NP Q + R RIGQ Sbjct: 542 AIDEYNRPDSDKFLFLLTTRAGGLGINLTSADVVVLFDSDWNPQADLQAMDRAHRIGQKK 601 Query: 605 DIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFD 664 + ++ + + + ++ + L + GR+ + G + Sbjct: 602 QVFVYRFVTDHSIEERILERAAQKLRLDQLVIQQGRSSSAQQKAGQMKEDLVDMIQHGAE 661 Query: 665 DLI--KNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNL 722 +I K + + + A + QG R E+ + + D+ TNL + + Sbjct: 662 RIINSKESMDVKDDIDAIIAQGESRTAELQAK--------YQQFTSLDELTNLKS--ESA 711 Query: 723 FDIIGINQDDRGDNM---IVLTPSDHMLVPDFP--GLSEDGITITFDREVALAREDAQFI 777 ++ G R + I + P+ ++ D + T V Sbjct: 712 YEWEGEQYKGRKPGVGTGIWIEPAKRERKQNYSIDSYYRDAMRTTSKPAV---------- 761 Query: 778 TWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVV---EAQAPKQLQLNR 834 P + + + ++ + L Y V E+ P + R Sbjct: 762 ----PKAPRAPKQVPTPEWQFYPARFIELQERETAAYQRSLHYQVPKSESSDPAAAEEQR 817 Query: 835 FLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQ 894 + + A + + + + QQ V + G Sbjct: 818 AKEQARI---------DAAEPLTEAEQAEKDELAPQGMSAWNRRDFQQFVKGCEKHGRTA 868 Query: 895 IEKSARA--LIDAARNEADEKLSAELSRLEAL-RAVNPNIRDDELTAIESNRQQVMESLD 951 A L D ++ +R+ L R +E A +Q+ L Sbjct: 869 YGAIAEEIGLGDKTEDDVRAYSEVFWARVHELSDGERIVQRIEEGEAKRRKQQEHESLLR 928 >UniRef50_D0NRU9 Chromodomain protein, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NRU9_PHYIN Length = 1004 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 130/718 (18%), Positives = 229/718 (31%), Gaps = 113/718 (15%) Query: 40 NRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALRE 99 +R+ D P+ F P DT+ DG E N + + + RE Sbjct: 201 DRILEIRDRPL--DDFAPDDTV---DG---------ESNFQYFLVKWKALPYDEISWERE 246 Query: 100 VFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFR-----MPYSGLRGQRTSL 154 + + DR+ R + AL + FR + Q L Sbjct: 247 DDVGDDAAVEQYNDRIVRAA-KRFKKIALAKHLPPSKRKNFRGYTAESRPPCRKEQTFQL 305 Query: 155 IPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQ-LLSGAAERVLIIVPETL 211 +QL + + +LADE+GLGKT++ M ++ ++ + +I+ P + Sbjct: 306 RDYQLTGVNWMLFNWYQKRNSMLADEMGLGKTVQTVMYINHLAVVERTPQPFIIVAPLST 365 Query: 212 QHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF------------------------- 246 W E NL ++ A Y F Sbjct: 366 LGHWQREFDSWTNLNAVVYHGSAAAREVLQNYEFFMSEDELLRVDELTRKDNNGKRAAPQ 425 Query: 247 -----DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 ++I + + A S L L + W L+VVDEAH L ++ S+ + Sbjct: 426 PKRNCYRFDVLITTYEMA--SATDLYKLAQINWQLMVVDEAHRL---KNRNSKLSNILHT 480 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLA 361 +LLLT TP Q +E + L LD +F F+E A Sbjct: 481 -RFTYENMLLLTGTPLQNNVEELWVLLNFLDTKKFASKESFLESFGELTDSAQV------ 533 Query: 362 GNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNT 421 E + + LL+ D E + + ++E + ++ + +R Sbjct: 534 -------------ERLHSELKPYLLRRMKEDVEKSLAPKEETIIE-VELTVLQKQYYRAI 579 Query: 422 RNGVKGFPKR--------ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERI 473 F R L + + L V G+ + ++ E Sbjct: 580 YEKNTEFLSRGGRKGDTPSLMNVLMELRKCCNHPFLVKGVEEREVKRLAKQANVSKEEIQ 639 Query: 474 YQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRA 531 Q + + + ++ L L + +VL+ ++ L R Sbjct: 640 RQ----ISESLVDTSGKLVLLDKLLPRLKETGHRVLIFSQFKIMLDIIQDYLALRR-YNC 694 Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFNPDLL 590 ++ ER A F ED+ + + LL + G G N A ++++D +NP Sbjct: 695 ERIDGNITGNERQSAIDRFCREDSNSFIMLLSTRAGGVGINLTAADTVIIYDSDWNPQND 754 Query: 591 EQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI-------- 642 Q R RIGQ ++I+ KT + + L + ++ Sbjct: 755 LQAQARCHRIGQKKSVKIYRLLTAKTYELHMFHKASLKLGLDQAVLGGIKSDDSVAKLKG 814 Query: 643 -------YDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHS 693 D + + I L E F + E A K E+ D++L + Sbjct: 815 AAKTPKTNDRMSKEEIENLLKHGAYEMFKE---QDSEAEAASKKFGEESIDQILSRST 869 >UniRef50_Q7KU24 Chromodomain-helicase-DNA-binding protein 1 n=29 Tax=Eukaryota RepID=CHD1_DROME Length = 1883 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 110/649 (16%), Positives = 205/649 (31%), Gaps = 67/649 (10%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRHA--PRVLLADEVGLGKTIEAGMILHQQLL-SGAAERV 203 +L +Q++ + + V+LADE+GLGKTI+ L+ Sbjct: 521 FLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPF 580 Query: 204 LIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYN------PFDTEQLVICSL 256 L +VP + W E ++ + + + Y ++ + Sbjct: 581 LCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKFNCILTTY 640 Query: 257 DFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATP 316 + + K + L +W L+VDEAH L ++ S Y+++++ LL+T TP Sbjct: 641 EIVLKDK---QFLGTLQWAALLVDEAHRL---KNDDSLLYKSLKEF--DTNHRLLITGTP 692 Query: 317 EQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEM 376 Q ++ +A L + P++F + F + N Sbjct: 693 LQNSLKELWALLHFIMPDKFDTWENFEVQHGNAEDKGYT--------------------R 732 Query: 377 IGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRE---- 432 + +Q +L+ D E + A+ E + ++ + ++ ++ Sbjct: 733 LHQQLEPYILRRVKKDVEKSLPAKVEQILR-VEMTSLQKQYYKWILTKNFDALRKGKRGS 791 Query: 433 ---LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDP 489 I + L A + E + + + T Sbjct: 792 TSTFLNIVIELKKCCNHAALIR---------------PSEFELMGLQQDEALQTLLKGSG 836 Query: 490 RVEWLMGYL--TSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAA 547 ++ L L +VL+ L L++R + R +A Sbjct: 837 KLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRH-FPFQRLDGSIKGEMRRQAL 895 Query: 548 AWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 F E + LL + G G N A +++FD +NP Q R RIGQ + + Sbjct: 896 DHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQV 955 Query: 607 QIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDL 666 I+ ++ + +V + + T +V + N +S DDL Sbjct: 956 NIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDL 1015 Query: 667 IKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDII 726 + E L EQ D L + + E D L AF + Sbjct: 1016 SAILKFGAEELFKD-EQEHDDDLVCDIDEILRRAETRNEDPEMPADDLLSAFKVASIAAF 1074 Query: 727 GINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGIT-ITFDREVALAREDA 774 D + D+ + +G D+E A ED Sbjct: 1075 EEEPSDSVSKQDQNAAGEEDDSKDWDDIIPEGFRKAIDDQERAKEMEDL 1123 >UniRef50_UPI000180C4B7 PREDICTED: similar to helicase, lymphoid-specific n=1 Tax=Ciona intestinalis RepID=UPI000180C4B7 Length = 936 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 99/651 (15%), Positives = 206/651 (31%), Gaps = 60/651 (9%) Query: 64 HDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRM 123 + + V + ++++ D + + EV + +L+ G + Sbjct: 267 IEEKMILVLDDEDQD---------EDGVKKKKNVSEVDIGKINKDDLLASKLYMGDGGKQ 317 Query: 124 DRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGL 181 + + Q P L P+Q+ + +A +LADE+GL Sbjct: 318 EARIKVINGVMQINGQDVPPNQPEYLTGGVLRPYQITGFEWLKVLFDNAVNGILADEMGL 377 Query: 182 GKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAE--- 237 GKTI+ ++ + + SG L+ P + W+ E R + L+ Sbjct: 378 GKTIQCIAMICRLVKSGFTGPFLVCAPLSTICNWINEFKRFAPRIPVLLYHGSAAERCIL 437 Query: 238 --AQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 +V+ S + R + L + W+ L+VDE H + ++ R Sbjct: 438 ASTISHLSPDLGCHPVVVTSYEVLIRDRP---TLGKHSWEYLIVDEGHRI---KNMNCRL 491 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ--------- 346 + ++ L + LLLT TP Q + ++ L L P F+D + F Sbjct: 492 IRELKALKVNA--KLLLTGTPLQNNLSELWSLLNFLLPEVFNDLSTFEAWFDLKKIQKGI 549 Query: 347 --KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELV 404 + + V + +L L + ++ + ++++ + S +E Q+ + Sbjct: 550 ESQQQQDVVIKLQKILVPFLLRRTKSDIQIYLPPKKELIVFAPLSESQNEIYQAIVNRTI 609 Query: 405 SMLM---DRHGTSRVLF-----------------RNTRNGVKGFPKRELHTIKLPLPTQY 444 + L R TR+ + + ++ + Sbjct: 610 RQYLHEDKDKDEQNELALERISNDSNQSDQGFYERETRSSTLATRQGKEREDRMTYDDES 669 Query: 445 QTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT--SHR 502 + +S +M + + + YP + + + +++ L L + Sbjct: 670 VVNVSLSNLMMQLRKCCNHPYLIKYPLIPGTDIFRVDEELISSSGKLQLLDRMLPVLKKK 729 Query: 503 SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLC 562 K+L+ + LE R R + + LL Sbjct: 730 GHKILLFSQMTSLLDILEDFCNFR-NHSYVRLDGSTKCEVRQERIDEYNRDPDLFIFLLS 788 Query: 563 SEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLV 622 + G G N A +V++D +NP Q R RIGQ + I+ T +V Sbjct: 789 TRAGGLGINLTSADTVVIYDSDWNPQNDLQAQDRCHRIGQTRSVLIYRFVSSNTVDQFMV 848 Query: 623 RWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQ 673 + DL + + + L++ + + Sbjct: 849 ERAEAKRVLERMII-NRNKFKGKLAEDLNSKEGTSSVSTQLLSLLQQNKSE 898 >UniRef50_D2VVJ6 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VVJ6_NAEGR Length = 1069 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 101/589 (17%), Positives = 197/589 (33%), Gaps = 63/589 (10%) Query: 119 QIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLA 176 + + + R AL Y + T+L +Q++ + + R H +LA Sbjct: 167 EDEEIIREALEDEEESYQGVLLTSSPKFIE--NTTLRSYQIDGVNWMIRLHDRGVNGILA 224 Query: 177 DEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDER 234 DE+GLGKT++ + L+IVP+++ W+ + + L+ F ++ Sbjct: 225 DEMGLGKTVQTLTWIAYLKFIRRIRGPHLVIVPKSVIPNWVNQANQWCPSLQVLKFHGDK 284 Query: 235 YAEAQHDAYNPFD-TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPS 293 + + ++V+ S + A + K L + W +++DEAH + ++ S Sbjct: 285 DQRREIKEKSLVGGKFEIVVTSYETAIKEKA---ALNKFRWYSIIIDEAHRI---KNENS 338 Query: 294 REYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVA 353 Q++ LLLT TP Q + ++ L L P+ F F A Sbjct: 339 ILSQSVRVF--DCQYRLLLTGTPLQNNLHELWSLLNFLLPDVFRSADDFDTWFNLKEGQA 396 Query: 354 DAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGT 413 + + + + + LL+ ++ + ++E+ Sbjct: 397 ET----------------HIIDQLHKVLKPFLLRRLKTEVKTDIPPKKEIYVEC-GLSKL 439 Query: 414 SRVLFRNTR----NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY 469 + +R+ N +KG K L + + L G Sbjct: 440 QKEWYRSILTKDLNSIKGGEKVRLLNVVMQLRKCCNHPYLFDGAEPGPPYTL-------- 491 Query: 470 PERIYQEFEGDNATWWNFDPRVEWLMGYLTS--HRSQKVLVICAKAATALQLEQVLRERE 527 N ++ + L ++ +VL+ LE R Sbjct: 492 -----------GDHLMNNSGKMYLVDKLLKKLKEQNSRVLIFTQMTRMLDILEDYCYLR- 539 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFN 586 S R++ F +E + LL + G G N A ++++D +N Sbjct: 540 NYEYCRIDGQTSSELREQHMDEFNKEGSSKFIFLLSTRAGGLGINLATADTVIIYDSDWN 599 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSV 646 P Q R RIGQ + ++ + + + + + + L GR Sbjct: 600 PQADLQAQDRCHRIGQKKPVNVYRLISKDSIEEKIYQRAVKKLYLDAVVIQQGR--LAEQ 657 Query: 647 YNDLINYLASPDQTEGFDDLIKNCRE--QHEALKAQLEQGRDRLLEIHS 693 N L G +++ K+ E L A L +G ++ EI Sbjct: 658 NNKLSKTELMSMIKFGAEEVFKSTESTITDEDLDAILSRGEQKIQEIDQ 706 >UniRef50_B4PGH5 GE19602 n=3 Tax=Coelomata RepID=B4PGH5_DROYA Length = 899 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 110/658 (16%), Positives = 210/658 (31%), Gaps = 70/658 (10%) Query: 67 WQMQVEEV----KEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAG-QID 121 ++V+ V KE Y+ + S + E+ D + ++ Sbjct: 177 EWLRVQRVFNHRKEPKDCTFYLVKWRELSYSDSS-WEIENDGIPGLKQAIAHYKDLLRLS 235 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEV 179 + +R R ++++ L+ L P Q+ + + +LADE+ Sbjct: 236 KKERPEDRPAPNMDLNKKYEDQPVFLKEAALKLHPFQMEGVSWLRYNWGQGIPTILADEM 295 Query: 180 GLGKTIEAGMILHQQLLSGAA-ERVLIIVPETLQHQWLVEMLRRFNL-RFALFDDERYAE 237 GLGKTI+ + L+ G LI VP + W E+ + + + Sbjct: 296 GLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTVANWERELELWAPEFYCITYVGGKTSR 355 Query: 238 AQHDAYNPF---------------DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEA 282 A +++ S + + L +W +LVVDEA Sbjct: 356 AVIRKNELSCKEVTTKTMRAKQTEYKFNVMLTSYELISLD---VAFLGSIDWAVLVVDEA 412 Query: 283 HHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQF 342 H L ++ S+ ++ + + + LLLT TP Q +E F L L ++F D F Sbjct: 413 HRL---KNNQSKFFRMLNK--YRIVYKLLLTGTPLQNNLEELFYLLNFLSSDKFDDLQTF 467 Query: 343 VEEQKN--YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSAR 400 + + + +LA + L + ++L M + + ++ ++ + + Sbjct: 468 QAKFADVAKEEQVKRLHEILAPHMLRRLKADVLKNMPSKAEFIVRVELSSMQKKFYKLIL 527 Query: 401 QELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSA 460 + L N G L I + L S Sbjct: 528 TKNFKAL---------------NKNGGGRVCSLLNIMMDLRKCCNHPYLFSSAAE----- 567 Query: 461 EDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRS--QKVLVICAKAATALQ 518 I + + +++ L L ++ +VL+ Sbjct: 568 ---------EATILPSGLYEINSLIKASGKLDLLSKMLKQLKADHHRVLIFSQMTKMLNI 618 Query: 519 LEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTG-AQVLLCSEIGSEGRNFQFASH 577 LE L E EG + + R A F LL + G G N A Sbjct: 619 LEDFL-EGEGYQYERLDGNIRGDLRQEAIDRFNAPKAEQFVFLLSTRAGGLGINLATADT 677 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC- 636 +++FD +NP Q R R+GQ + I+ + + +++ + Sbjct: 678 VILFDSDWNPHNDVQAFSRAHRMGQTKKVMIYRFVTHNSVEERIMQVVKHKMMLTHLVVR 737 Query: 637 -PTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHS 693 G + ++L N L + D + A+ L++ + E S Sbjct: 738 PGMGGNNNNFTKDELENILRFGTEDLFKDGKEEAIHYDDRAVTELLDRTIRGIQEKKS 795 >UniRef50_D0MSZ7 Chromodomain-helicase-DNA-binding protein, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MSZ7_PHYIN Length = 1788 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 109/625 (17%), Positives = 197/625 (31%), Gaps = 74/625 (11%) Query: 76 EENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKY 135 E++G+ YI R+ R + +K + + D + + Sbjct: 367 EDDGMRYYIKWRILPYTDATWERACDIKDDAALTKYKASIVV--PDEEVWKPRPRPSIRE 424 Query: 136 SSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQ 193 + P G Q SL +QL + + +LADE+GLGKTI+ L+ Sbjct: 425 YRKLEESPKFG-EDQSLSLRAYQLEGLNWLLWNWYNERPSILADEMGLGKTIQTLSFLNL 483 Query: 194 QLLS---GAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD--- 247 LI+ P +L QW E + ++ + + Sbjct: 484 LRDDPKIKIRGPFLIVAPLSLIVQWQNECEMWTTMNCVVYHGNSASREIIRDFEFKYLDD 543 Query: 248 ----------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQ 297 +++ + + A + + L + W LVVDEAH L ++ SR + Sbjct: 544 QLRPDKKRTYRFNILVTTYEVAIKD---IAVLSKIHWRCLVVDEAHRL---KNQSSRLVE 597 Query: 298 AIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVA 357 + L +LLT TP Q E +A L LD F + F+ + + Sbjct: 598 QMRSLRR--DHCVLLTGTPLQNKTEELWALLNFLDAKSFPSVSDFLAKFGDLHEAQQVAD 655 Query: 358 MLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVL 417 + + LL+ D E + ++E + ++ + Sbjct: 656 -------------------LHKMLKPYLLRRVKEDVEKSLPPKEETIVE-VELTPVQKQW 695 Query: 418 FRNTRNGVKGFPKRE--------LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY 469 +R F R L + + L +G+ Sbjct: 696 YRAIYERNTSFLNRGGNPRNVPNLMNVMMELRKCCNHPYLNNGVEEILN----------- 744 Query: 470 PERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLRERE 527 + ++ + L KVL+ +E LR Sbjct: 745 --EGLTTDTQRHEMLVKCCGKMVLIDKLLPRLNDGGHKVLIFSQMVRVLDIIEDYLRY-C 801 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQV-LLCSEIGSEGRNFQFASHMVMFDLPFN 586 G + +R A F + + V LL ++ G G N A +++FD +N Sbjct: 802 GYLYERLDGNIRGNDRQAAVDRFVKPEYKRFVMLLSTKAGGLGLNLTAADTVIIFDSDWN 861 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSV 646 P Q R RIGQ H ++I+ KT + + L + R + Sbjct: 862 PQNDLQAQARAHRIGQTHSVKIYRLITRKTYEMHMFHKASLKLGLDKAVLTHMRRENEEE 921 Query: 647 YNDLINYLASPDQTEGFDDLIKNCR 671 N + ++++ D+L+K Sbjct: 922 GGKKRNKSSKAEESKEIDELLKRGA 946 >UniRef50_Q7RM86 Chromodomain-helicase-DNA-binding protein, CHD-1-related n=4 Tax=Plasmodium (Vinckeia) RepID=Q7RM86_PLAYO Length = 2541 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 101/599 (16%), Positives = 196/599 (32%), Gaps = 78/599 (13%) Query: 136 SSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQ 193 + + S L G++ L +QL + + R VLLADE+GLGKT++ ++ Sbjct: 902 KFDPYNETPSYLHGKK--LRAYQLTGLNWMVSRMKRNLSVLLADEMGLGKTVQTIAVVGH 959 Query: 194 -QLLSGAAERVLIIVPETLQHQWLVEMLRRFNL-RFALFDDERYAEAQHDAYNP------ 245 L++VP++ WL E + + Y Sbjct: 960 MLYKEKLIGPYLVLVPQSTVDNWLNEFKNWLPQANVVCYHGNAVSRELIRTYELKKVYVQ 1019 Query: 246 ----FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 + I + S +E L W L+VVDEAH L ++ S+ + ++Q Sbjct: 1020 NRGYRYKFDVCITT-PSILNSVSDVELLKRIPWQLMVVDEAHQL---KNRQSKRFIELKQ 1075 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPV-----ADAV 356 LLL+ TP +E + L L+P ++ + F ++ A Sbjct: 1076 FM--AESKLLLSGTPLHNNLEELWTLLHFLNPQQYTYYEAFQKKYNEIENTSLIGEAKQK 1133 Query: 357 AMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRV 416 ++ ++L L + + + + + + + + E ++ ++ Sbjct: 1134 QLMQLQHELHEVILRRVKKDVEKSLPNKVERILR---VELSPIQIEYYKNILTKNYEQ-- 1188 Query: 417 LFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQE 476 G K L I + L + + E Sbjct: 1189 -----LAKASGGAKNSLQNICMELKKVCNHPFLCCEPIDKDEYRE--------------- 1228 Query: 477 FEGDNATWWNFDPRVEWLMGYL--TSHRSQKVLVICAKAATALQLEQVLREREGIRAAVF 534 ++ L L R +VL+ L + L R G + Sbjct: 1229 ------RLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLR-GFKHQRL 1281 Query: 535 HEGMSIIERDRAAAWFAEEDTG-AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQR 593 M+ R +A F +++ LL ++ G G N A ++++D +NP Q Sbjct: 1282 DGTMTKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLTSADTVIIYDSDWNPQNDLQA 1341 Query: 594 IGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINY 653 R RIGQ +QI+ + + + ++ + + N + Sbjct: 1342 GARAHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKKQNDNVNFI--- 1398 Query: 654 LASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSN-----GGEKAQALAESIE 707 G + + E L L+ G +L E +S+ GE + + + ++ Sbjct: 1399 --------GGEGSNSSNGFTREELSKILKFGSQKLWEKNSSKYSPQDGEDGKNIIKGVD 1449 >UniRef50_A2FGX6 SNF2 family N-terminal domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2FGX6_TRIVA Length = 1454 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 94/584 (16%), Positives = 184/584 (31%), Gaps = 53/584 (9%) Query: 148 RGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLS-GAAERVL 204 SL +QL + + +LADE+GLGKT +A + L Sbjct: 200 SKSGKSLREYQLQGVNFLVNSWYNNKNPILADEMGLGKTCQASYFIKVLATQVKLPGPYL 259 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAY------NPFDTEQLVICSLDF 258 I+ P + W E+ +L+ F + Y +++ + ++ Sbjct: 260 ILAPLSTIPHWERELHDWTDLKVLTFLGSKERRDMLKKYLITYQGTRIPKFDVLLTTFEY 319 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 R + + + W L++DEAH L ++ S+ + + +LLT TP Q Sbjct: 320 IMREVRTFK--ADFHWRCLIIDEAHRL---KNFDSKITHTMNN--YNADFKVLLTGTPLQ 372 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIG 378 + + L LD RF D F E+ + + + Sbjct: 373 NNTKELWTLLNFLDTERFADHHIFDEKFGKLQDAEQ-------------------IKELQ 413 Query: 379 EQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHT--- 435 +L+ D E E++ + +++ + R H Sbjct: 414 AILKPLMLRRLKGDVEKNIIPMDEVIIEC-GMTPHQKGYYQSIYTKNMDYLSRGAHKQNC 472 Query: 436 -----IKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPR 490 I + L + G R L P + + +N + + Sbjct: 473 SNLMSICMELRKCCNHPYLIKGAEDQIL----IERAALLPNKKKKPANFENECLISSAGK 528 Query: 491 V--EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAA 548 + + +VL+ LE LR + + +R +A Sbjct: 529 MILLDKLLVKLKKDGHRVLIFSQMTKMLDILEDYLRYKR-YNYERIDGSVKTEDRQQAID 587 Query: 549 WFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 F +E + + LLC+ G G N A +V++D +NP Q R RIGQ + Sbjct: 588 RFNDEKSNSFIFLLCTRAGGLGINLVSADTVVIYDSDWNPQNDIQATARCHRIGQKKKVT 647 Query: 608 IHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLI 667 + T + + T + + ++ L F++ Sbjct: 648 AYRFITANTYERKMFDIASLKKGLDTAVLETNKGDWKHDTAEIEK-LLRIGAYYAFNEDA 706 Query: 668 KNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDD 711 + E + + + + + +++ G IE+++D Sbjct: 707 NDLLINEEDIDTIISKSKLIQHDANTSDGSTFSKAVFDIEDKED 750 >UniRef50_B3L200 SNF2-family protein, putative n=8 Tax=Eukaryota RepID=B3L200_PLAKH Length = 3207 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 106/611 (17%), Positives = 194/611 (31%), Gaps = 75/611 (12%) Query: 153 SLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQ-QLLSGAAERVLIIVPE 209 L +QL + + R VLLADE+GLGKT++ ++ L+IVP+ Sbjct: 1390 KLRAYQLTGLNWMVSRMKRNLSVLLADEMGLGKTVQTIAVVGHMLYKEKLIGPYLVIVPQ 1449 Query: 210 TLQHQWLVEMLRRFNL-RFALFDDERYAEAQHDAYN----------PFDTEQLVICSLDF 258 + WL E + + + + I + Sbjct: 1450 STVDNWLNEFKSWLPQANVVCYHGNAVSRELIRTHELKKVYVANKGFRYKFDVCITT-PS 1508 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 S +E L + W L+VVDEAH L ++ S+ + ++Q LLL+ TP Sbjct: 1509 ILNSLSDVELLKKMPWQLMVVDEAHQL---KNRQSKRFIELKQFM--AESKLLLSGTPLH 1563 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIG 378 +E + L L+P ++ + F ++ + L+ K + Sbjct: 1564 NNLEELWTLLHFLNPQQYTHYENFQKKYNEIENTS-----LIGEAKQKQLMQ------LQ 1612 Query: 379 EQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR-------NGVKGFPKR 431 + E +L+ D E + + E + ++ ++N G K Sbjct: 1613 HELHEVILRRVKKDVEKSLPNKVERILR-VELSPIQIEFYKNILTKNYEQLAKASGGAKN 1671 Query: 432 ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRV 491 L I + L + + E ++ Sbjct: 1672 SLQNICMELKKVCNHPFLCCEPVDKDEYKE---------------------RLVYSSGKI 1710 Query: 492 EWLMGYL--TSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAW 549 L L R +VL+ L + L R G + MS R +A Sbjct: 1711 CLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLR-GFKHQRLDGTMSKEMRKKAMNH 1769 Query: 550 FAEEDTG-AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 F +++ LL ++ G G N A ++++D +NP Q R RIGQ +QI Sbjct: 1770 FNSKNSDDFVFLLSTKAGGLGINLTSADTVIIYDSDWNPQNDLQAGARAHRIGQTKTVQI 1829 Query: 609 HVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIK 668 + + + + ++ + + N + G + Sbjct: 1830 YRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKKQNDNVNYI-----------GGEGGNT 1878 Query: 669 NCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGI 728 + E L L+ G +L E +S+ + E + D +L Sbjct: 1879 SNGFTREELSKILKFGAQKLWEKNSSKYSPQKMDEEKAVIKGVDVDLDKILEEAEAHENA 1938 Query: 729 NQDDRGDNMIV 739 N ++ N Sbjct: 1939 NNANKDLNSEF 1949 >UniRef50_D2V6Z5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin n=1 Tax=Naegleria gruberi RepID=D2V6Z5_NAEGR Length = 1283 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 98/590 (16%), Positives = 194/590 (32%), Gaps = 47/590 (7%) Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIE 186 Y+ E+ + L+G L +Q+ + + +LADE+GLGKTI+ Sbjct: 465 YYKVAHRLVEKVEKQPTILKGG--DLKAYQIQGLQWLVSLYNNRLNGILADEMGLGKTIQ 522 Query: 187 AGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYN 244 +L L+IVP + W E + L+ + + + Sbjct: 523 TISLLSYLYEFKSNKGPHLVIVPLSTMDNWANEFEKWCPTLKLIRYSGTKQERQKIHLEL 582 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAE 304 ++++ ++ + K + + + +W+ +++DE H + +++ + +A+ + Sbjct: 583 KKQDFEVLLIQYEYITKEK---KFMKKIQWNYIIMDEGHRI---KNSDCKLVKALAE--Y 634 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNK 364 +LLT TP Q ++ +A L L P F F + + + K Sbjct: 635 TSRNRVLLTGTPLQNDLKELWALLHFLLPKIFDSSLNFENWFNSPFAASGEKVEMTEEEK 694 Query: 365 LSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG 424 L ++ + + LL+ +D E+ + E V + +D + L++N ++ Sbjct: 695 L------LIIHRLHQVLRPFLLRREKTDVEEQLPEKSEKV-VYIDLSAMQKTLYQNIQDK 747 Query: 425 VK------GFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 K L+ + L + D Sbjct: 748 NKIVLNGKKLRNTSLNNTVMQLRKVCNHPYLFFKETEYLNNLSDETY------------- 794 Query: 479 GDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 + E L + +VL+ E+ L G Sbjct: 795 --YDWMCRSSGKFELLSRIFPKLKRTGHRVLLFSQMTQILDIFEEFL-SHLGYEYLRLDG 851 Query: 537 GMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIG 595 ++ +R + +D+ LL + G G N Q A ++MFD +NP Q + Sbjct: 852 AVNAADRGTLVKQWNAKDSPYFVFLLSTRSGGLGLNLQTADTVIMFDSDWNPQQDLQAMA 911 Query: 596 RLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLA 655 R RIGQ + + + + E DA G+ S + L Sbjct: 912 RAHRIGQTKSVLVLTFCTRTPVEEKVRDRAQEKRDAEAKVIKAGKFNQKSTILERQELLE 971 Query: 656 SPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAES 705 + + E D + E + L + D + E+ L E Sbjct: 972 TLLKKE-SDIYSAHEAPSDEQMNNLLARSDDEFEIFQTMDKEQEAQLIEK 1020 >UniRef50_A9SY70 SNF2 family DNA-dependent ATPase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9SY70_PHYPA Length = 1032 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 100/638 (15%), Positives = 206/638 (32%), Gaps = 78/638 (12%) Query: 151 RTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLS-GAAERVLIIV 207 + +QL + + R + +LADE+GLGKT++ +L G + +++ Sbjct: 165 NGKMREYQLAGLNWLIRLYENGVNGILADEMGLGKTLQTISLLAYLHEYCGISGPHMVVG 224 Query: 208 PETLQHQWLVEMLRRFN-LRFALFDDERYAEA-QHDAYNPFDTEQLVICSLDFARRSKQR 265 P++ W+ E+ R LR F + Q + + + S + A + + Sbjct: 225 PKSTLGNWMNEIRRFCPVLRPFKFHGNQDERNYQREELLVAGKFDICVTSFEMAIKERT- 283 Query: 266 LEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHF 325 L + W +++DEAH + ++ S + + + + LL+T TP Q + + Sbjct: 284 --ALRKFSWRYIIIDEAHRI---KNESSILAKTMRLFSTN--YRLLITGTPLQNNLHELW 336 Query: 326 ARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPL 385 A L L P F F E + + + + + + L Sbjct: 337 ALLNFLLPEIFSSAETFDEWFQISGENDQ----------------HEVVQQLHKVLRPFL 380 Query: 386 LQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR-----NGVKGFPKRELHTIKLPL 440 L+ SD E ++E + + + +R G ++ L I + L Sbjct: 381 LRRLKSDVERGLPPKKETILK-VGMSTLQKQYYRALLQKDMDAINTGGERKRLLNIAMQL 439 Query: 441 PTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS 500 G + ++ L L Sbjct: 440 RKCCNHPYLFEGAEPGPPYTT-------------------GEHLVDTAGKMVLLDKLLPK 480 Query: 501 --HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ 558 R +VL+ LE + R + + +R+ A F ++ Sbjct: 481 LKQRQSRVLIFSQMTRLLDILEDYCQYRT-YQYCRIDGNTTGDDRESAIDQFNAPNSEKF 539 Query: 559 -VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTA 617 LL + G G N A ++++D +NP + Q R RIGQ ++Q+ E T Sbjct: 540 CFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEFTI 599 Query: 618 QSVLVRWYHEGLDAFEHTCPTGRTIYDS--VYNDLINYLASPDQ-----------TEGFD 664 + ++ ++ L GR ++L+ + + E D Sbjct: 600 EEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRYGAEKVFSSGDSTITDEDID 659 Query: 665 DLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLF- 723 +I E L ++++ D ++ + + +++D + + + Sbjct: 660 RIIAKGEEATAELDQKMKKFTDDAIKFKMDDTAGLYDFDDGDDKEDGKNDFKKIIADNWI 719 Query: 724 ------DIIGINQDDRGDNMIVLTPSDHMLVPDFPGLS 755 ++ D + P P P + Sbjct: 720 EPPKRERKRNYSESDYFKQAMRAGPVPKPREPRIPRMP 757 >UniRef50_P38144 ISWI chromatin-remodeling complex ATPase ISW1 n=47 Tax=Fungi/Metazoa group RepID=ISW1_YEAST Length = 1129 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 107/617 (17%), Positives = 194/617 (31%), Gaps = 82/617 (13%) Query: 65 DGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMD 124 D QV +V EEN + + V R+ + K +D D Sbjct: 130 DPKFRQVLDVLEEN----KANGKGKGKHQDVRRRKTEHEEDAELLKEED----SDDDESI 181 Query: 125 RFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLG 182 F R L P+Q+ + + H + +LADE+GLG Sbjct: 182 EFQFRE---------------SPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLG 226 Query: 183 KTIEAGMILHQQ-LLSGAAERVLIIVPETLQHQWLVEMLRRF-NLRFALFDDERYAEAQH 240 KT++ L + L+I P++ + WL E+ R ++ + ++ A+ Sbjct: 227 KTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAEL 286 Query: 241 DAYNPFD-TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAI 299 +VI S + R K L + W+ +++DEAH + ++ S Q + Sbjct: 287 IQKKLLGCDFDVVIASYEIIIREK---SPLKKINWEYIIIDEAHRI---KNEESMLSQVL 340 Query: 300 EQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML 359 + LL+T TP Q + +A L L P+ F D F + + D Sbjct: 341 REFT--SRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQ---- 394 Query: 360 LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 + + + + LL+ SD E + ++EL ++ + + ++ Sbjct: 395 -----------DKIVKQLHTVLQPFLLRRIKSDVETSLLPKKEL-NLYVGMSSMQKKWYK 442 Query: 420 NTRNGV---------KGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP 470 K L I + L G D Sbjct: 443 KILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAA 502 Query: 471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIR 530 + + +VL+ + LE Sbjct: 503 KLQVLDKLLKKLK-----------------EEGSRVLIFSQMSRLLDILEDY-CYFRNYE 544 Query: 531 AAVFHEGMSIIERDRAAAWFAEEDTG-AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDL 589 + +R +A + D+ LL + G G N A +V++D +NP Sbjct: 545 YCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQA 604 Query: 590 LEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIY--DSVY 647 Q + R RIGQ +++ + + + ++ + L + RT Sbjct: 605 DLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKKENK 664 Query: 648 NDLINYLASPDQTEGFD 664 D + L S Q D Sbjct: 665 ADSKDALLSMIQHGAAD 681 >UniRef50_C1LZY0 Chromodomain helicase DNA binding protein, putative n=1 Tax=Schistosoma mansoni RepID=C1LZY0_SCHMA Length = 1966 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 119/752 (15%), Positives = 244/752 (32%), Gaps = 98/752 (13%) Query: 60 TITSHDGWQMQVEEVKEENGLLTYI--GTRLDTEESGVALREVFLDSKLVFSKPQDRLFA 117 T + DG + +++ EE + + G T +L V L + + + A Sbjct: 696 TWEARDGEVVDMDKFIEEYRTMRKVFMGHLCSTVGPDGSLSVVSLCKRHKPGRRSSKELA 755 Query: 118 GQIDRMDRFALR--YRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV-- 173 + + + +Q+ S L L +QL + + ++ Sbjct: 756 AENLSPELLRKLPPDKCLTDLKKQYTSQPSFLDETDGQLHEYQLEGVNWLRFSFGNKIDT 815 Query: 174 LLADEVGLGKTIEAGMILHQQLLSGAA-ERVLIIVPETLQHQWLVEMLRR-FNLRFALFD 231 +LADE+GLGKTI+ L+ G L+ P + W E +L + Sbjct: 816 ILADEMGLGKTIQTIAFLYSLYKEGHCRGPFLVAAPLSTIINWEREFEFWAPDLYVVSYI 875 Query: 232 DERYAEAQHDAYNPFD--------------------TEQLVICSLDFARRSKQRLEHLCE 271 ++ + + +++ S + + L Sbjct: 876 GDKDSRTVIREHEFSFDEGAVRGGAKAMKMRTGTSVRFHVLLTSYELISIDQAL---LGS 932 Query: 272 AEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLL 331 +W++LVVDEAH L ++ S+ ++ + + LLLT TP Q +E F L + Sbjct: 933 IDWEVLVVDEAHRL---KNNQSKFFRILTT--YKIGYKLLLTGTPLQNNLEELFHLLHFM 987 Query: 332 DPNRFHDFAQFVEEQKNY--RPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAA 389 P +F+D F++E + + +L + L + ++L +M + + ++ + Sbjct: 988 TPEKFNDMQGFLDEFADISKEEQVKKLHDMLGQHLLRRLKADVLQDMPSKGEFIVRVELS 1047 Query: 390 NSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIK 449 + L R G S+V L I + L Sbjct: 1048 PMQKRYYKFILTRNFEALSCRSGGSQV---------------SLINIMMDLKKCCNHPFL 1092 Query: 450 VSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVL 507 + + ++E + L +VL Sbjct: 1093 FPSAAE--------------EAQRMPNGAYEGVGLRKGSGKLELMSKMLRKLYETKHRVL 1138 Query: 508 VICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIG 566 + LE L + EG + ++ R A F D+ + LL + G Sbjct: 1139 IFSQMTKMLDLLEDFL-DSEGYKFERIDGAVTGQLRQDAIDRFNAPDSLSFAFLLSTRAG 1197 Query: 567 SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYH 626 G N A ++++D +NP Q R RIGQ++ + I+ T + + + Sbjct: 1198 GLGINLASADTVIIYDSDWNPHNDIQAFSRAHRIGQSNKVMIYRFVTRGTVEERVTQVAK 1257 Query: 627 EGLDAFEHTC--PTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQG 684 + + G + ++ + + F + ++ ++H + + Sbjct: 1258 KKMMLTHLVVRPGLGGKGSCQMSKKELDDILKFGTEDLFKEGEESMEDEHTIVYD--DAA 1315 Query: 685 RDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGI---------------N 729 +RLL+ G E+ + + + L +F + ++ G+ Sbjct: 1316 IERLLDRSQQGLEE--------KALEMNDYLTSFKVAHYEKKGVIEEEDDESEDEDENRE 1367 Query: 730 QDDRGDNMIVLTPSDHMLVPDFPGLSEDGITI 761 + + T + +L F ED Sbjct: 1368 VIKQELDPADPTYWEKLLRHHFEQAQEDQARA 1399 >UniRef50_Q23KF5 Type III restriction enzyme, res subunit family protein n=2 Tax=Tetrahymena thermophila RepID=Q23KF5_TETTH Length = 2184 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 116/652 (17%), Positives = 217/652 (33%), Gaps = 90/652 (13%) Query: 90 TEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSG--- 146 +ES L + K + Q+ +I L+ + Y ++ P+ Sbjct: 746 DKESRQVLSQQLERHKTLLDLEQNPKKKQKIGPQGLIELKNKLFFYDVANYKQPFQYTQK 805 Query: 147 ---LRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQL-LSGAA 200 + QR L +QL + + V+LADE+GLGKTI++ ++ Sbjct: 806 TQPIYKQRKLLRYYQLESLNWMIEAWYSKRNVILADEMGLGKTIQSTAFINHLYTFENVR 865 Query: 201 ERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH------------------DA 242 LII P + W + NL L+ D E ++ Sbjct: 866 GPFLIIAPLSTLEHWKRSVEDWTNLNAVLYYDHSGQEGRNCCRFYEWLYTDISTKGTVLQ 925 Query: 243 YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQL 302 N Q++I S + L + +VVDEAH L ++ ++ +++L Sbjct: 926 SNEIYKFQVLITSNEVFLSDTN--NFLINIPFQFIVVDEAHRL---KNQNAKILATLKRL 980 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAG 362 LLLT TP Q E + L ++PN+F +F E+ + Sbjct: 981 P--CKRTLLLTGTPIQNNTEELWTLLNYIEPNKFASLQEFKEQFGELQNKEQV------- 1031 Query: 363 NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR 422 + + + LL+ D ED+ QE + + + + L+R Sbjct: 1032 ------------DNLQVKIKPFLLRRMKEDVEDSIPPLQETIIDI-EMTTLQKTLYRAIY 1078 Query: 423 NGVKGFPKR---------ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERI 473 K ++ L+ +++ L + + + Sbjct: 1079 ERNKSMLQKNFSSMAMNTSLNNLEMQLRKCCNHPFLIKEMEIELT-------------QN 1125 Query: 474 YQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRA 531 ++ E + ++ L + ++ +K+L+ LE+ LR R+ ++ Sbjct: 1126 FKTSEERYKCLVDTSGKMILLDKLVQKYKIEGKKILIFSQFVYMLNLLEEYLRYRQ-LKY 1184 Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGA-QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLL 590 + ER A F + D LL ++ G G N A+ +++FD +NP Sbjct: 1185 EKIDGSVKSKERQNAIDRFNDPDKKRDVFLLSTKAGGLGINLTSANIVIIFDSDWNPQND 1244 Query: 591 EQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDL 650 Q R RIGQ ++ ++ +KT ++ + + L + G D Sbjct: 1245 VQATARAHRIGQKQEVMVYRFITKKTYEAEMFERATKKLGLDQAIFMGGEFKSVQGNKDE 1304 Query: 651 INYLASPDQTEGFDDLI----------KNCREQHEALKAQLEQGRDRLLEIH 692 L D I K E E + + R+ + Sbjct: 1305 SKKLGKNDVESLLKKGILGLVNEEEENKKSNEFQEEDIDMILKNNTRIAKYS 1356 >UniRef50_Q9DGQ2 Chromodomain helicase DNA binding protein 1 (Fragment) n=17 Tax=Coelomata RepID=Q9DGQ2_CHICK Length = 981 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 109/667 (16%), Positives = 215/667 (32%), Gaps = 83/667 (12%) Query: 107 VFSKPQDRLFAGQIDRMDRF-ALRYRARKYSSEQFRMPYSGLRGQR-TSLIPHQLNIAHD 164 F D F+ + F + ++ + S + G+ L +QLN + Sbjct: 117 KFQACIDEYFSRNQSKTTPFKDCKILKQRPRFVALKKQPSYIGGRDCLELRDYQLNGLNW 176 Query: 165 VGRRHAPR--VLLADEVGLGKTIEAGMILHQQLLSG-AAERVLIIVPETLQHQWLVEMLR 221 + +LADE+GLGKTI+ L+ L++VP + W E+ Sbjct: 177 LAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHELYGPFLLVVPLSTLTSWQREIQT 236 Query: 222 RFN-LRFALFDDERYAEAQHDAYN------PFDTEQLVICSLDFARRSKQRLEHLCEAEW 274 + ++ + + + +++ + + + K L L Sbjct: 237 WAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNRV-- 294 Query: 275 DLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN 334 + +DEAH L ++ S Y+ + + LL+T TP Q ++ ++ L + P Sbjct: 295 -FIGIDEAHRL---KNDDSLLYKTL--IDFKSNHRLLITGTPLQNSLKELWSLLHFIMPE 348 Query: 335 RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSE 394 +F + F EE R A + ++ LL+ D E Sbjct: 349 KFSSWEDFEEEHGKGREFGYAS--------------------LHKELEPFLLRRVKKDVE 388 Query: 395 DAQSARQELVSMLMDRHGTSRVLF-----RNTRNGVKGFPKR--ELHTIKLPLPTQYQTA 447 + A+ E + M+ + + RN + KG I + L Sbjct: 389 KSSPAKVEQILR-MEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHC 447 Query: 448 IKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVL 507 + + A L R +VL Sbjct: 448 YLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLR--------------ERGNRVL 493 Query: 508 VICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIG 566 + L + L+ R+ + R +A F E + LL + G Sbjct: 494 IFSQMVRMLDILAEYLKYRQ-FPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAG 552 Query: 567 SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYH 626 G N A +V+FD +NP Q R RIG + I+ + + + ++ Sbjct: 553 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGPKKQVNIYRLVTKGSVEEDILERAK 612 Query: 627 EGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRD 686 + + D+ +++ ++P + F+ E L A L+ G + Sbjct: 613 KKMVLDHLVIQR----MDTTGKTVLHTGSTPSSSTPFNK---------EELSAILKFGAE 659 Query: 687 RLLEIHSNGGE-----KAQALAESIEEQDDDTNLIAFAMNLFDIIGI-NQDDRGDNMIVL 740 L + E + + E +++++ L+ L + N + ++ I L Sbjct: 660 ELFKEPEGEEEEPQEMDIDEILKRAETRENESGLLTVGDELLSQFKVANFSNMDEDDIEL 719 Query: 741 TPSDHML 747 P ++ Sbjct: 720 EPEQNLR 726 >UniRef50_UPI000180C7E1 PREDICTED: hypothetical protein n=1 Tax=Ciona intestinalis RepID=UPI000180C7E1 Length = 1867 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 108/629 (17%), Positives = 202/629 (32%), Gaps = 67/629 (10%) Query: 150 QRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLLSG-AAERVLII 206 + L +QL + + V+LADE+GLGKTI++ L + LII Sbjct: 502 GKLQLRDYQLQGVNWLAHSWCKGNSVILADEMGLGKTIQSISFLSYLYHTHELYGLFLII 561 Query: 207 VPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAY-----NPFDTEQLVICSLDFAR 260 VP + W VE + ++ ++ + A N V+ S + Sbjct: 562 VPLSTMTSWQVEFQTWAPYMNVIVYMGDQSSRATIREVEWMFPNKHYKFNAVLTSYEILL 621 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG 320 + K L W ++ VDEAH L ++ S Y+++++ LL+T TP Q Sbjct: 622 KDK---SFLGSHSWAVIAVDEAHRL---KNDDSLLYRSLKEF--KSNHRLLITGTPLQNS 673 Query: 321 MESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 ++ +A L + P++F ++ F EE R + + Sbjct: 674 LKELWALLHFIMPDKFETWSDFEEEHAKNRDSGYTS--------------------LHKV 713 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKR-------EL 433 LL+ + E + ++ E + + + ++ + Sbjct: 714 LQPFLLRRVKKEVEKSLPSKVEQILR-VPMSSLQKQYYKWLLTKNYAALTKGGRGSFTSF 772 Query: 434 HTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEW 493 I + L A V PE E ++ Sbjct: 773 CNIIMELKKCCNHAFLVKA-----------------PETEATSSEMLLKVLLRNSGKMIL 815 Query: 494 LMGYL--TSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA 551 L L +VL+ +++ L R ++ +S R RA F Sbjct: 816 LDKLLIRLKENGHRVLIFSQMVRMLDIIQEYLVVRR-LQFQRLDGSVSSDLRRRALDHFN 874 Query: 552 EEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610 E + LL + G G N A +++FD +NP Q R RIGQ + + I+ Sbjct: 875 AEGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPMNDLQAQARAHRIGQKNQVNIYR 934 Query: 611 PYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNC 670 + + ++ + + T +V ++ + D+L Sbjct: 935 LVCAGSVEEDIIERAKKKMVLDHLVIQRMDTSGKTVLFKTSTPSSTTNNPFNKDELSAIL 994 Query: 671 REQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQ 730 + E L + E +A+ + D L AF + F + Sbjct: 995 KFGAEELFQEAEGEEKEPECDIDEILRRAETRQDQPSMGVGDELLSAFNVATFTLDEEEP 1054 Query: 731 DDRGDNMIVLTPS-DHMLVPDFPGLSEDG 758 + + P D + + L ++ Sbjct: 1055 IQVSKDWENIIPEKDRKKIEEENRLKQEA 1083 >UniRef50_Q8SWP7 Similarity to CHROMODOMAIN HELICASE DNA-BINDING PROTEIN 2 n=1 Tax=Encephalitozoon cuniculi RepID=Q8SWP7_ENCCU Length = 1251 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 106/658 (16%), Positives = 213/658 (32%), Gaps = 60/658 (9%) Query: 130 YRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEA 187 R + S + L +QL + + R ++ADE+GLGKT+++ Sbjct: 278 IDWRPPRENFIKYEESPVFKGGNRLREYQLEGLNWLLNRWYYKQSCIMADEMGLGKTVQS 337 Query: 188 GMILHQQLLS-GAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF 246 ++ VL++ P ++ W E +LR + + R A Y Sbjct: 338 VTFINTLFTKYDYCAPVLVVTPLSIIPHWEREFEAWTDLRVLKYHENRPGRALIAEYEFV 397 Query: 247 DT--------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA 298 ++I + D + EHL + + + + DEAH L ++A S+ Sbjct: 398 LKKNNLEIRLFDVLITTYDTVMAEQ---EHLSQFHFSVGIFDEAHRL---KNAKSKAATI 451 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQK-NYRPVADAVA 357 + L +LL+ TP Q + ++ L +DP RF F+ E K + + Sbjct: 452 LRTL--KFNHKVLLSGTPLQNNISELWSLLNFIDPMRFSSLPHFLGEFKMENINDVEKLQ 509 Query: 358 MLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVL 417 LL L + ++ + +++ + ++ ++ + L + Sbjct: 510 GLLRPLMLRRMKEDVEKSIPTKEETIIEVALTMIQKRFYRAILEKNIEFL---TKGGKES 566 Query: 418 FRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEF 477 N N + K +H + + Q R AE D+ + E Sbjct: 567 APNLLNVMMELRKCCIHPYLIKGAEE-QILSGYLKKKRERSKAEGAENDITLTSEVLNED 625 Query: 478 EGDNATWWNFDP----RV---------EWLMGYLTSHRSQKVLVICAKAATALQLEQVLR 524 E + D ++ KVL+ L + L Sbjct: 626 EHQDGNSVISDIDEYYKIFIQSSGKLVLLDKLLGKLKDGHKVLIFSQMTRCLDLLAEYLA 685 Query: 525 EREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDL 583 R+ + G R A F+++ + LL + G G N A +++FD Sbjct: 686 YRK-YKYERIDGGARTENRQAAIDRFSDKTSDVFVFLLSTRAGGVGINLTAADTVIIFDS 744 Query: 584 PFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIY 643 +NP Q R RIGQ +++++ E T + + L Sbjct: 745 DWNPQNDLQAQARCHRIGQTSEVKVYRLVTENTYEREMFDKAGLKLGLDRAVLQKMTFEE 804 Query: 644 DSVY-----NDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRL---------- 688 + + L + + R+ E Q+ + R ++ Sbjct: 805 QKSEKTRKKDAIETLLRKGAYGVLMETDDASSRKFCEEDIDQILERRTKIVKHSDGGNVF 864 Query: 689 ------LEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVL 740 +E + + + L + ++ + + L G++ +D + +L Sbjct: 865 SKASFQVEEEIDDPDFWENLLSKRKSEESEGRIRRQMRRLAREGGLSSEDISEIDELL 922 >UniRef50_O97159 Chromodomain-helicase-DNA-binding protein Mi-2 homolog n=25 Tax=Coelomata RepID=CHDM_DROME Length = 1982 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 99/596 (16%), Positives = 196/596 (32%), Gaps = 72/596 (12%) Query: 138 EQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQL 195 +++ + L G L P+Q+ + + + +LADE+GLGKTI+ L+ Sbjct: 714 KKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLY 773 Query: 196 LSGAA-ERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEA-QHDAYNPFD----- 247 G L+ VP + W E + + ++ + A + F+ Sbjct: 774 KEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIR 833 Query: 248 ------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 +++ S + L +W +LVVDEAH L + S+ Sbjct: 834 GSKVSRLRTTQYKFNVLLTSYELISMDAAC---LGSIDWAVLVVDEAHRL---KSNQSKF 887 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN--YRPVA 353 ++ + + + LLLT TP Q +E F L L ++F+D F E + Sbjct: 888 FRILN--SYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSKEEQV 945 Query: 354 DAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGT 413 + +L + L + ++L M + + ++ + + + + L + G Sbjct: 946 KRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGG 1005 Query: 414 SRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERI 473 L I + L +A ++ Sbjct: 1006 GS---------------CSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEIN----- 1045 Query: 474 YQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRA 531 + ++ L L + + +VL+ LE L E E + Sbjct: 1046 ---------SLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFL-EGEQYKY 1095 Query: 532 AVFHEGMSIIERDRAAAWFAEED-TGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLL 590 G++ R A F LL + G G N A ++++D +NP Sbjct: 1096 ERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHND 1155 Query: 591 EQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC-PTGRTIYDSVYND 649 Q R RIGQA+ + I+ + + + + + P + Sbjct: 1156 IQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQ 1215 Query: 650 LINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAES 705 ++ + + F + + E ++ LL+ + G E+ ++ A Sbjct: 1216 ELDDILRFGTEDLFKE------DDKEEAIHYDDKAVAELLDRTNRGIEEKESWANE 1265 >UniRef50_C1E7E6 SNF2 super family n=2 Tax=Micromonas RepID=C1E7E6_9CHLO Length = 712 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 107/669 (15%), Positives = 206/669 (30%), Gaps = 57/669 (8%) Query: 85 GTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQID--RMDRFALRYRARKYSSEQFRM 142 G ++D +E LD +SK D + + Sbjct: 71 GEKVDLDEQKYKQLNELLDQTTFYSKFLAEQMVDGEDGGDEPKKKKAKTKAASKEDIKSE 130 Query: 143 PYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAA 200 L R L +QL + ++ +LAD++GLGKTI+ L G Sbjct: 131 TQRLLPMMRAELREYQLKGVKWLIALYQNGLNGILADQMGLGKTIQTIGFLSHLRSKGIL 190 Query: 201 ERVLIIVPETLQHQWLVEMLRRFNL-RFALFDDERYAEAQHDAYN------PFDTEQLVI 253 L+I P + W+ E + L+ + A+ DT +++ Sbjct: 191 GPYLVIGPLSTLPNWVNEFNKFCPEFPVVLYHGSKQERAEIRNRRLPLSTTIKDTFPVIV 250 Query: 254 CSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLT 313 S + + + L + + LVVDE H L ++ + + ++ + LLLT Sbjct: 251 TSFEIVMADR---KFLQKYNFKYLVVDEGHRL---KNFDCKLIRELKTIP--TANKLLLT 302 Query: 314 ATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNML 373 TP Q + ++ L L P+ F D QF + + + Sbjct: 303 GTPLQNSLPELWSLLHFLLPDVFSDLTQFQNWFDFSQQDDADGDKEASKRV-------KV 355 Query: 374 GEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKREL 433 E + LL+ D E ++E+V L+ + K F + Sbjct: 356 VEKLHGILKPFLLRRLKGDVETNLPRKKEIV------------LYAHMVETQKKFNDALV 403 Query: 434 HTIKLPLPTQYQTAIKV--SGIMGARKSAEDRARDMLYPERIYQEFEGD-----NATWWN 486 + + + + +G ++ +P+ I +G Sbjct: 404 NKTIADVLKKISGDSGLVPAGSTALNNMLMQLRKNCNHPDLISGGLDGSIMFPSADELVE 463 Query: 487 FDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERD 544 + L LT R K L+ +E L E++G + + ER Sbjct: 464 QCGKFRLLDRLLTKLRDKGHKTLIFSQMTKMLDLIESYL-EQKGQKVCRIDGSVQWQERK 522 Query: 545 RAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 + F LL + G G N A ++++D +NP Q + R RIGQ Sbjct: 523 KQMDEFNTNPEYGVFLLSTRAGGLGINLTAADTVIIYDSDWNPHQDMQAMDRCHRIGQTK 582 Query: 605 DIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFD 664 + + + + ++ + L + G ++ + Sbjct: 583 PVHVLRLATAHSVEGKMLSRANSKLALEKLVITKGN-----FRQEIGKEAEDGGKRPKAS 637 Query: 665 DLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDD---DTNLIAFAMN 721 + E LK + D L + + + + + + + Sbjct: 638 GGGVSTDELIALLKGDVSDS-DGLAQSADISEADLEMIMDRRDLLGQKKPNQPVGPGWEE 696 Query: 722 LFDIIGINQ 730 + D G++ Sbjct: 697 VEDRSGMSL 705 >UniRef50_Q8IJG6 Chromodomain-helicase-DNA-binding protein 1 homolog, putative n=2 Tax=Eukaryota RepID=Q8IJG6_PLAF7 Length = 3328 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 103/588 (17%), Positives = 193/588 (32%), Gaps = 77/588 (13%) Query: 153 SLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQ-QLLSGAAERVLIIVPE 209 L +QL + + R VLLADE+GLGKT++ ++ L+IVP+ Sbjct: 1295 KLRAYQLTGLNWIVSRMKRNLSVLLADEMGLGKTVQTIAVVGHMLYKEKLIGPYLVIVPQ 1354 Query: 210 TLQHQWLVEMLRRFNL-RFALFDDERYAEAQHDAYNP----------FDTEQLVICSLDF 258 + WL E + + + + I + Sbjct: 1355 STVDNWLNEFKSWLPQANVVCYHGNAVSRELIRTHELKKVYVPNKGYRYKFDVCITT-PS 1413 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 S +E L + W L+VVDEAH L ++ S+ + ++Q LLL+ TP Sbjct: 1414 ILNSVSDVELLKKMPWQLMVVDEAHQL---KNRQSKRFIELKQFM--AESKLLLSGTPLH 1468 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIG 378 +E + L L+P ++ + F ++ + + + L + + Sbjct: 1469 NNLEELWTLLHFLNPQQYTYYETFQKKYNEIENTS----------LIGEAKQKQLIQ-LQ 1517 Query: 379 EQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR-------NGVKGFPKR 431 + E +L+ D E + + E + ++ ++N G K Sbjct: 1518 HELHEVILRRVKKDVEKSLPNKVERILR-VELSPIQIEYYKNILTKNYEQLAKASGGAKN 1576 Query: 432 ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRV 491 L I + L + + + E ++ Sbjct: 1577 SLQNICMELKKVCNHPFLCAEPLDKDEYKE---------------------RLVYSSGKI 1615 Query: 492 EWLMGYL--TSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAW 549 L L R +VL+ L + L R G + M+ R +A Sbjct: 1616 CLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLR-GFKHQRLDGTMTKEMRKKAMNH 1674 Query: 550 FAEEDTG-AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 F +++ LL ++ G G N A ++++D +NP Q R RIGQ +QI Sbjct: 1675 FNSKNSDDFVFLLSTKAGGLGINLTSADTVIIYDSDWNPQNDLQAGARAHRIGQTKTVQI 1734 Query: 609 HVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIK 668 + + + + ++ + + N G + Sbjct: 1735 YRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKKQNDNVN-----------YVGGETGGS 1783 Query: 669 NCREQHEALKAQLEQGRDRLLEIHSNG--GEKAQALAESIEEQDDDTN 714 + E L L+ G +L E +S+ +K +I+ D D + Sbjct: 1784 SNGFTREELSKILKFGAQKLWEKNSSKYSPQKLDEDKNAIKGVDVDLD 1831 >UniRef50_O17909 Protein H06O01.2, partially confirmed by transcript evidence n=3 Tax=Caenorhabditis RepID=O17909_CAEEL Length = 1461 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 108/675 (16%), Positives = 214/675 (31%), Gaps = 76/675 (11%) Query: 82 TYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFR 141 Y+ S + + + R+ + + LR R + E Sbjct: 333 EYLIKWSGLPYSDCTWEDEKMVAPEQIKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMP 392 Query: 142 MPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLLS-G 198 L +QL + + +LADE+GLGKTI++ +L Sbjct: 393 DFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYD 452 Query: 199 AAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPF------DTEQL 251 A L++VP + W E + + ++ + + Y F Sbjct: 453 LAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINA 512 Query: 252 VICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLL 311 ++ + + + K L +W L+VDEAH L ++ S Y+++ Q LL Sbjct: 513 ILTTYEILLKDKA---FLSSIDWAALLVDEAHRL---KNDESLLYKSLTQF--RFNHKLL 564 Query: 312 LTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELN 371 +T TP Q ++ +A L + P +F + +F N+ + Sbjct: 565 ITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAH--------------------NESNH 604 Query: 372 MLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKR 431 + ++ LL+ D E + + E + +D + ++ + Sbjct: 605 KGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILR-VDMTAHQKQFYKWILTKNYRELSK 663 Query: 432 ELH-------TIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATW 484 + + + L A + IY + +G Sbjct: 664 GVKGSINGFVNLVMELKKCCNHASLTR-----------------QYDHIYDDAQGRLQQL 706 Query: 485 WNFDPRVEWLMGYL--TSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 ++ L L + +VL+ L++ L+ R + M Sbjct: 707 LKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDILQEYLQLRR-FPSQRLDGSMRADL 765 Query: 543 RDRAAAWFAEEDT-GAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 R +A + + LL + G G N A +++FD +NP Q + R RIG Sbjct: 766 RKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 825 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTI-YDSVYNDLINYLASPDQT 660 Q + I+ + + + +V L T + + + P Sbjct: 826 QTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDK 885 Query: 661 EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 + ++K + K EQ + ++ G E +A E ++E + + Sbjct: 886 QELSAILKFGAVELFKEKEGEEQEPEVDIDRILMGAETREAEEEVMKENE--------LL 937 Query: 721 NLFDIIGINQDDRGD 735 + F D+ D Sbjct: 938 SSFKYANFAIDEEKD 952 >UniRef50_B8P2U7 Predicted protein n=2 Tax=Agaricomycetes RepID=B8P2U7_POSPM Length = 1497 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 110/678 (16%), Positives = 223/678 (32%), Gaps = 56/678 (8%) Query: 75 KEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRL------FAGQIDRMDRFAL 128 ++ + L + + ++ ++ + V P F G+ D R Sbjct: 542 RQTDTYLDSLAQAVMEQQQDQSIFDTHPAPFEVEDGPIGEATFGAQQFEGEQDDKGRTDY 601 Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIE 186 A K + + P + G +L +QL + + +LADE+GLGKTI+ Sbjct: 602 YAVAHKIKEKISKQPSLLIGG---TLKDYQLKGLQWMVSLYNNRLNGILADEMGLGKTIQ 658 Query: 187 AGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYN 244 ++ + L+IVP + W E + ++ + + Sbjct: 659 TISLITFLIESKKQRGPYLVIVPLSTMTNWSGEFAKWAPGVKMIAYKGNPQQRKILQSEI 718 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAE 304 Q+++ + ++ + + HL +W +++DE H + ++ S+ Q + Q Sbjct: 719 RSGNFQVLLTTYEYIIKDRV---HLARLKWVHMIIDEGHRM---KNTQSKLAQTLTQ-HY 771 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNK 364 H L+LT TP Q + +A L F E + + + Sbjct: 772 HSRYRLILTGTPLQNNLPELWALLNF----------SFDEWFNTPFANSGTGDKI----E 817 Query: 365 LSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG 424 L+ +E ++ + + LL+ D E + E V + L++ + Sbjct: 818 LNEEEALLIIRRLHKVLRPFLLRRLKKDVESELPDKVEKVIK-VRMSALQSQLYKQMKKY 876 Query: 425 VKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATW 484 ++ + +++ I E E + Sbjct: 877 KMIADGKDTKGKSGGVKGLSNELMQLRKICQHPFLFESV-------EDRINPSGIVDDKI 929 Query: 485 WNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 ++E L L +VL+ +E L+ G + G + Sbjct: 930 VRASGKIELLSRILPKFFATDHRVLIFFQMTKVMDIMEDFLKF-MGWKYLRLDGGTKTED 988 Query: 543 RDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVM-------FDLPFNPDLLEQRI 594 R F D+ + +L + G G N Q A ++M FD +NP Q Sbjct: 989 RAGHVQLFNAPDSDIRVFILSTRAGGLGLNLQTADTVIMNNLIDNSFDSDWNPHADLQAQ 1048 Query: 595 GRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYL 654 R RIGQ ++I EK+ + + + LD + GR S + +L Sbjct: 1049 DRAHRIGQTKVVRILRFITEKSVEESMFQRARYKLDIDDKVIQAGRFDNKSTQEEQEQFL 1108 Query: 655 ASPDQTEGFDDLI---KNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDD 711 S + + ++ E+ L A+ E+ +I +AQ ++ + Sbjct: 1109 RSILENDQEEENEEAGDMSDEEINELIARSEEEERIFRDIDIQRDREAQEAWKAAGHRGK 1168 Query: 712 DTNLIAFAMNLFDIIGIN 729 + L + ++ Sbjct: 1169 PPLPLMQLEELPECYQMD 1186 >UniRef50_Q8IIW0 PfSNF2L n=12 Tax=Eukaryota RepID=Q8IIW0_PLAF7 Length = 1426 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 91/642 (14%), Positives = 209/642 (32%), Gaps = 79/642 (12%) Query: 120 IDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLAD 177 ++ + F L A + + G ++ P+QL + + R +LAD Sbjct: 291 TEKEEDFMLLKDANEEDEAIILKQPMNING---TMKPYQLEGLNWLYQLYRFKINGILAD 347 Query: 178 EVGLGKTIEAGMILHQQ-LLSGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERY 235 E+GLGKT++ +L ++ +II P + W E+ + ++ + + Sbjct: 348 EMGLGKTLQTISLLCYLRFNKNIKKKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKD 407 Query: 236 AEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 + + +++ + + + K L + +W LV+DEAH + ++ S Sbjct: 408 QRKELNRNLLHSDFDVLLTTYEIVIKDK---SALYDIDWFFLVIDEAHRI---KNEKSVL 461 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 ++ L LL+T TP ++ ++ L L P F + +F + + Sbjct: 462 SSSVRFL--RSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTND 519 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR 415 ++ + + + +L+ + E + ++E+ + + Sbjct: 520 ------------NKQSEIITQLHTILKPFMLRRLKVEVEQSLPPKREIYIF-VGMSKLQK 566 Query: 416 VLFRNTRNGV------KGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY 469 L+ + + K ++ I + L GI Sbjct: 567 KLYSDILSKNIDVLNAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPY----------- 615 Query: 470 PERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQVLRERE 527 + ++ L L + + +VL+ ++ R + Sbjct: 616 ---------IEGNHLIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWK- 665 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFN 586 ER F E ++ LL + G G N A +++FD +N Sbjct: 666 NYPYLRIDGSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYN 725 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSV 646 P + Q + R RIGQ + ++ + + + +V + L G+ +S Sbjct: 726 PQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGKLNLNSA 785 Query: 647 YNDLINYL----------------ASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLE 690 + L S E D ++ + ++ ++ +L+ + Sbjct: 786 KENNKQELHDILNFGAPEVYKTQDISSISDEDIDIILADAEKRTIEIEKKLKNLENIFDL 845 Query: 691 IHSNGGEKAQ-----ALAESIEEQDDDTNLIAFAMNLFDIIG 727 + + S E D++ + + + + G Sbjct: 846 TNISLDGGLNMYNDLEKEASEESTDEEDSSGSGEETILEGSG 887 >UniRef50_UPI0001926057 PREDICTED: similar to chromodomain helicase DNA binding protein 4 n=1 Tax=Hydra magnipapillata RepID=UPI0001926057 Length = 1665 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 103/647 (15%), Positives = 202/647 (31%), Gaps = 73/647 (11%) Query: 139 QFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLL 196 + S + L +Q+ + + A R +LADE+GLGKTI+ L+ L Sbjct: 477 SYTNQPSFITDTGGILHEYQIEGINWIRYSWAQRDNTILADEMGLGKTIQTITFLNSLLS 536 Query: 197 SGAA-ERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNP--------- 245 G + LI P + W E N+ + R Y Sbjct: 537 EGRSEGPFLICAPLSTIVNWEREFEFWAPNMYVVTYSGNRENRQVIRNYEMTFDDDSMRK 596 Query: 246 -----------FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSR 294 +++ S + L +W +LV+DEAH L ++ SR Sbjct: 597 GQKAYKVKKDVICKFHVLLTSYELVAIDAN---TLQSIDWKVLVIDEAHRL---KNNQSR 650 Query: 295 EYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY--RPV 352 ++ + + ++ LLLT TP Q +E F L L P++F + F+ E ++ Sbjct: 651 FFRTMT--SYNIDYTLLLTGTPLQNNLEELFHLLNFLCPDKFQNRENFLAEFEDIAKEDQ 708 Query: 353 ADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHG 412 + +L + L + ++L +M + + ++ + + + + L R Sbjct: 709 IKKLHEMLGPHMLRRLKGDVLKDMPSKSEFIVRVELSPMQKKYYKYILTKNFGALNTR-- 766 Query: 413 TSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPER 472 G + L I + L S + A ++ Sbjct: 767 --------------GSQQVSLLNIVMELKKCCNHPYLFSTASLEAPRYANNAYEVKGLTE 812 Query: 473 IYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAA 532 + + +VL+ LE + G R Sbjct: 813 ASGKLVLLYKMLKKL------------KEQGHRVLIFSQMTRVLDLLEDFMEGH-GWRYE 859 Query: 533 VFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLE 591 ++ R A F ++ LL + G G N A + ++D +NP Sbjct: 860 RLDGTITGGIRQSAIDRFNLPNSEIFSFLLSTRAGGLGINLATADTVFIYDSDWNPHNDI 919 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC--PTGRTIYDSVYND 649 Q R RIGQ + + I+ + T + + + + + G S+ Sbjct: 920 QAFSRAHRIGQQNKVMIYRFVTKSTVEERITQVAKKKMMLTHLVVRPGLGSKAAQSMSKR 979 Query: 650 LINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQ 709 ++ + E F D + + + DR E +++ Sbjct: 980 ELDDILKFGTEEMFKDDGDDSTGRIVYDDNAINMLLDR-------SNEGIMEKESGMDDY 1032 Query: 710 DDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSE 756 + ++ + D + + + I + +L + E Sbjct: 1033 LSSFKVASYTVKDKDEPDVEVLKQEADTIDADYWEKLLRHHYEQEQE 1079 >UniRef50_C4LW36 Chromodomain-helicase-DNA-binding protein, putative n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4LW36_ENTHI Length = 1262 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 100/591 (16%), Positives = 190/591 (32%), Gaps = 79/591 (13%) Query: 151 RTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLS-GAAERVLIIV 207 + L +Q+ + + V+LADE+GLGKT++ + + L+IV Sbjct: 366 KNKLRDYQIEGVNWITYAFSQNTNVILADEMGLGKTVQTITFIRHLYDNYNIIGPFLVIV 425 Query: 208 PETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFD------TEQLVICSLDFAR 260 P + W E + L ++ + + A F +++ S + Sbjct: 426 PLSTISNWSKEFNKWAPKLNCVVYTGDGESRAIIRKTEMFGNKKGTIKFNVLLTSFELVI 485 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG 320 + + + + W VVDEAH L ++ + Y+ + + LL+T TP Q Sbjct: 486 KDQ---DVFNQFHWKYTVVDEAHRL---KNNEGQLYEVLMR--TTTENKLLITGTPLQNT 537 Query: 321 MESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 ++ ++ L L P +F F +F + E I + Sbjct: 538 LKELWSLLHFLHPKKFISFEEFEKTYS--------------------VEGTEEINKIHNE 577 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKR-------EL 433 LL+ D E + ++E + ++ + +R K+ L Sbjct: 578 LKPYLLRRMKKDVEKSLPPKKERILR-VELSPIQKQYYRWIITKNSDALKKAVQQQKTSL 636 Query: 434 HTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRV-- 491 I + L I ++ +M + ++ Sbjct: 637 MNICMELKKLCNHPILINELMNSENE----------------------ENLIQSCGKMIL 674 Query: 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA 551 + +VL+ L L R G M R RA F Sbjct: 675 LDKLLVKLKETGHRVLIFSQMVRMLDVLSNYLHFR-GFNYQRLDGAMGREARQRAMDHFN 733 Query: 552 EEDT-GAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610 +D+ LL + G G N A ++++D +NP Q R RIGQ + I+ Sbjct: 734 AKDSTDFVFLLSTRAGGLGINLTTADTVIIYDSDWNPQNDLQAQARCHRIGQEKTVNIYR 793 Query: 611 PYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNC 670 E T + ++ + L T N+L + + I Sbjct: 794 LATEGTIEEKILLSAKKKLVLDHLIIQTMEKKGKKNGNELFDKSELQKILQFGAQDI--- 850 Query: 671 REQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 ++ + E D +LE E+ + + + + N+ FA++ Sbjct: 851 --FNKDNGERKEVNIDEILERA--DVEEGKEESSGVNDLLGAFNVENFAIS 897 >UniRef50_A7RPD7 Predicted protein n=2 Tax=Cnidaria RepID=A7RPD7_NEMVE Length = 911 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 111/651 (17%), Positives = 211/651 (32%), Gaps = 82/651 (12%) Query: 134 KYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMIL 191 +Y + + P + +L +QL + + +LADE+GLGKTI+ ++ Sbjct: 278 RYINGEEVSPLQPVLLTGGALRSYQLEGVEWLKGLYENGVNGILADEMGLGKTIQCIGLV 337 Query: 192 HQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYN------ 244 + G L+ P + W+ E R + L+ Sbjct: 338 SYLIEMGVRGPFLVAAPLSTLPNWVSEFRRFSPQIPVILYHGSIQERTSLRRKITKLKKA 397 Query: 245 -PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLA 303 PF+T +V+ S + A ++ L L W ++VDE H + ++ R + ++ + Sbjct: 398 GPFETMPVVVTSYEIAMNDQKHLFQLM---WKHMIVDEGHRI---KNLNCRLIRELK--S 449 Query: 304 EHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGN 363 + LLLT TP Q + ++ L L P+ F D F + Sbjct: 450 YNSANRLLLTGTPLQNNLAELWSLLNFLLPDIFDDLNSFQRWFDFSAINDEGGN----EK 505 Query: 364 KLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQEL-------------VSMLMDR 410 ++ ++ + + E + LL+ +D E + ++E+ +D+ Sbjct: 506 IIAQEKEHQVLERLHSILTPFLLRRLKTDVELSLPPKKEVLVRAPLTSKQTEFYRAALDK 565 Query: 411 -------------------HGTSRVLFRNTRNGVKGF-------------------PKRE 432 T R + RN R Sbjct: 566 TILDIVGDNKDKKEDKVEISSTGRKKRKGRRNINYKIFDDENGSIEELAEELATLEKSRR 625 Query: 433 LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVE 492 + Y +IK++ I+ + + + YP + + ++ Sbjct: 626 EICTPSQKSSTYDISIKITNILMLLRKCCNHPYLLEYPLDPVTQQYKIDEELVRCSGKML 685 Query: 493 WLMGYLT--SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF 550 L + R K+L+ L+ R G + + M + +R F Sbjct: 686 LLDQMVPALKRRGHKILIFSQMTKMLDILQDYCYLR-GYQYSRLDGSMKVEDRREEIDAF 744 Query: 551 AEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610 A + LL + G G N A ++++D +NP Q R RIGQ I ++ Sbjct: 745 ASDPEKFIFLLSTRAGGLGLNLSAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPILVYR 804 Query: 611 PYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNC 670 T +V + G+ V +N L + E Sbjct: 805 LVTSNTVDQKIVERAASKRKLEKMVIYKGKF-KGKVDGTTLNALQLKELLESSHHDEIIS 863 Query: 671 REQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 +++ +++LE DR S+ K + A + D D+ L Sbjct: 864 KDEVILSQSELESLLDR-----SSMYVKRETSASVPDIDDTDSALFRVIEE 909 >UniRef50_A2QRG3 Contig An08c0130, complete genome n=9 Tax=Trichocomaceae RepID=A2QRG3_ASPNC Length = 841 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 99/655 (15%), Positives = 201/655 (30%), Gaps = 76/655 (11%) Query: 130 YRARKYSSEQFRMPYSGLRGQ------------RTSLIPHQLNIAHDVGRRHAPR--VLL 175 A +++++++ + L GQ ++ +QL + +L Sbjct: 189 QEALEHAADEYEANPTALGGQELVATQQPELVTGGTMKKYQLEGLEWLKSLWMNGLCGIL 248 Query: 176 ADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDER 234 ADE+GLGKT++A ++ + LI P + W+ E + ++ L+ R Sbjct: 249 ADEMGLGKTVQAISLIAFFKEKNISGPFLIAAPLSTVSNWVDEFAKWTPEIKTVLYHGTR 308 Query: 235 YAEA--QHDAYNPFDT----EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 A + N D +V S + + + L + +W ++VDE H L Sbjct: 309 DERATIRRKFMNMKDQRSADFPVVCTSYEICMNDR---KFLAQYQWRYIIVDEGHRL--- 362 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ-- 346 ++ + + + L + LL+T TP Q + ++ L L P F+D F Sbjct: 363 KNMNCKLIKEL--LTYNSANRLLITGTPLQNNITELWSLLHFLLPEIFNDLNSFQSWFDF 420 Query: 347 --------------KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD 392 + R + + +L L + ++ + +++ Sbjct: 421 SSMLDNNGQTDVMERRKRTLVSTMHSILKPFLLRRVKTDVETSLPKKREYILYAPLTAEQ 480 Query: 393 SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELH------------------ 434 + + ++ T R++ ++ R KR Sbjct: 481 KDLYREILNGTGRQYLEEKATERLMAKSGRPSRSQSLKRSADTSGASSPNKSLKSSRSST 540 Query: 435 TIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIY----QEFEGDNATWWNFDPR 490 LPT + K + P Y + + T + Sbjct: 541 PASTALPTSRRRGKKEIAQKKMQNPIMQARLACNSPHNFYWPWMDDPTSIDETLVTASGK 600 Query: 491 VEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAA 548 + L + + K+L+ L+ + +S +R Sbjct: 601 MLLLDRLVPCLLNKGHKILIFSQFKTQLDILQDWATQLRSWNCCRIDGAVSQEDRRAQIK 660 Query: 549 WFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQI 608 F + LL + G +G N A +++FD +NP Q R RIGQ + + Sbjct: 661 AFNTDKNYKLFLLSTRAGGQGINLMAADTVILFDSDWNPQQDLQAQDRAHRIGQTKPVIV 720 Query: 609 HVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT-------IYDSVYNDLINYLASPDQTE 661 + + T + L+ G+ S D + D+ E Sbjct: 721 YRLATKGTVEQTLLEKADSKRRLERLVIQKGKFRSLLDPGSLSSNDVDDLKKALGQDEYE 780 Query: 662 GFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLI 716 F+ + L + G + ++E + D L+ Sbjct: 781 TFEAGADPATLLSKKDLDILTDRSEEAYVRAEKGLDTTGRAFMAVETKRDGDGLM 835 >UniRef50_A0C011 Chromosome undetermined scaffold_14, whole genome shotgun sequence n=4 Tax=Paramecium tetraurelia RepID=A0C011_PARTE Length = 1668 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 107/596 (17%), Positives = 206/596 (34%), Gaps = 58/596 (9%) Query: 125 RFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHA--PRVLLADEVGLG 182 R L + ++ ++ + R L +QL+ + + R V+LADE+GLG Sbjct: 519 RNQLYFLNQRKPPHEYTQLTQTIYKDRRLLRDYQLDSLNWLIRAWYEDRNVILADEMGLG 578 Query: 183 KTIEAGMILHQQL-LSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDD--ERYAEAQ 239 KTI+ L+ LII P + W + NL L+ D A Sbjct: 579 KTIQTIAFLNHLYNFENYRGPFLIIAPLSTLQHWKRTVEEWTNLNAVLYYDQESSAGRAL 638 Query: 240 HDAYNPFD----------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAH 283 Y F Q++I S + + Q + + +VVDEAH Sbjct: 639 CRQYEFFYTDISMKGIVLQASEIYKFQILITSYEVFMQDFQAI--FINIPFQYIVVDEAH 696 Query: 284 HLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFV 343 L +++ +R Q++++L LLLT TP Q E F+ L ++P +F + F Sbjct: 697 KL---KNSNARILQSLKKLC--CQRTLLLTGTPIQNNTEELFSLLNFIEPYQFSNLISFK 751 Query: 344 EEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQEL 403 E + + +L+ D E QE Sbjct: 752 REYGQLETSDQVEKLNVL-------------------LKPYILRRQKEDVEQMIPPLQET 792 Query: 404 VSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDR 463 + + + + +++ K ++ + I++ ++ Sbjct: 793 IIDI-EMTTIQKHIYKALYERNKSMLEQGFSQWAANAASLNNLEIQLRKCCNHPFLIQEM 851 Query: 464 ARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQ 521 D+ ++ ++ L L R++ K+L+ LE+ Sbjct: 852 QNDLTKGCSNKNDYIL---KLVECSGKMILLDKLLNKFRNEGKKMLIFSQFTMMLSILEE 908 Query: 522 VLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGA-QVLLCSEIGSEGRNFQFASHMVM 580 L+ R+ ++ + ER A F + LL ++ G +G N A +V+ Sbjct: 909 YLKFRQ-VKYEKIDGQIKARERQNAIDRFNDPQKKREVFLLSTKAGGQGINLTAAEIVVI 967 Query: 581 FDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGR 640 +D +NP Q R RIGQ+ ++ ++ + T ++ + + L + +G+ Sbjct: 968 YDSDWNPQNDVQATARAHRIGQSKEVTVYRLITKDTYEAEMFERAIKKLGLDQAIFMSGQ 1027 Query: 641 TIYDSVY---NDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHS 693 N ++ D + I ++ E+ D +LE +S Sbjct: 1028 FKSCESSFKINKNDKKMSKQDMEVLLKNGIIGLISHNQNGDTFQEKNIDEILEKNS 1083 >UniRef50_Q4UI59 SNF2-family protein (Chromodomain-helicase-DNA-binding protein 1 homologue), putative n=2 Tax=Theileria RepID=Q4UI59_THEAN Length = 1816 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 122/751 (16%), Positives = 225/751 (29%), Gaps = 75/751 (9%) Query: 66 GWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDR 125 +++ VKEE + LD E + + F +S Q + G + Sbjct: 708 ETDVKINGVKEEKNEQEDVKMDLDQETNSTTSAQSFPNSVKSEPNAQQSVNTGSTENSVN 767 Query: 126 FALRYRARKYSSEQFRMPYSGLRGQR--TSLIPHQLNIAHDVGRRHAPR--VLLADEVGL 181 A + A + + L +QL + + R VLLADE+GL Sbjct: 768 SAQQGDAGVKKYHLRDNVPNSIYKVSEPRKLRDYQLTGLNWMVNRMKRGLSVLLADEMGL 827 Query: 182 GKTIEAGMIL-HQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNL-RFALFDDERYAEAQ 239 GKT++ ++ H LIIVP++ W+ E + A Sbjct: 828 GKTVQTISLVGHFMYKEFLIGPYLIIVPQSTIDNWMREFEAWLPQANAVCYYGNATAREM 887 Query: 240 HDAYNP----------FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSE 289 + I + S L+ L W L+VVDEAH L + Sbjct: 888 IRQRELTRIFVPGKGERYKCDVCITT-PSIINSPADLDFLRRISWQLMVVDEAHQL---K 943 Query: 290 DAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY 349 + S+ + + Q LLL+ TP +E + L ++P + + F Sbjct: 944 NKNSKRFVELMQFM--ADYKLLLSGTPLHNNLEELWTLLHFINPQIYPYYEDFRRRYSEI 1001 Query: 350 RPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMD 409 A + ++ L + + E +L+ D E + + E + ++ Sbjct: 1002 ENPA----------AIGENKQKQLLS-LQHELHEFVLRRVKKDVEKSLPNKVERILR-VE 1049 Query: 410 RHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY 469 ++N R + L KV EDR + Sbjct: 1050 LSPMQIEWYKNILARNYEELARNSGGSRSSLQNICMELKKVCNHPFLCYEPEDRQVWL-- 1107 Query: 470 PERIYQEFEGDNATWWNFDPRVEWLMGYLT--SHRSQKVLVICAKAATALQLEQVLRERE 527 ++ L L + +VL+ + + L R Sbjct: 1108 ------------QGLIYGSGKICLLDKLLQRLKEKGHRVLIFSQMVRMLNIISEYLTLR- 1154 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFN 586 G + M R +A F + + LL ++ G G N A ++++D +N Sbjct: 1155 GFKHQRLDGTMGKEVRKKAMDHFNDPQSDDFCFLLSTKAGGLGINLTSADTVIIYDSDWN 1214 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPT----GRTI 642 P Q R RIGQ +QI+ + + + ++ + G + Sbjct: 1215 PQNDLQAEARAHRIGQTKTVQIYRLVTKDSIEQTILERAKTKMVLDALVVQGLNKRGDAV 1274 Query: 643 Y------DSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGG 696 + + + ++ + + + +L+ D++L+ Sbjct: 1275 MFNDDGKSGFSREELAKILKFGASKLWATANPQTNK-TSSTDEKLDIDLDKVLQEAELTK 1333 Query: 697 EKAQALAESI------------EEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSD 744 E LA + E + F I ++R Sbjct: 1334 ENDSDLAADLLSSYTNITEFRYEPPEGQLEATGENDKEFWEATIPLEERVKLKKKKQEEL 1393 Query: 745 HMLVPDFPGLSEDGITITFDREVALAREDAQ 775 ++ P + G T D A D Q Sbjct: 1394 LVMGPRRTRAKDTGTIETDDYSDDEADADFQ 1424 >UniRef50_B9N3S4 Chromatin remodeling complex subunit n=4 Tax=Magnoliophyta RepID=B9N3S4_POPTR Length = 2332 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 106/584 (18%), Positives = 203/584 (34%), Gaps = 66/584 (11%) Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVGLGKTIE 186 R + L+G SL PHQL + + + V+LADE+GLGKT+ Sbjct: 724 RRDGLQNEIATLMEQPEELKGG--SLFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVS 781 Query: 187 AGMILHQQLLSGAAE-RVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYN 244 A L A L++VP + W E NL + A A Y Sbjct: 782 ACAFLSSLYFEFKASLPCLVLVPLSTMPNWFSEFALWAPNLNVVEYHGCAKARAMIRLYE 841 Query: 245 P-------------FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA 291 +++ + + L W++LVVDE H L +++ Sbjct: 842 WHASDPNKMNKKTTSYKFNVLLTTYEMVLADSTY---LRGVPWEVLVVDEGHRL---KNS 895 Query: 292 PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY-- 349 S+ + + + +LLT TP Q + + L L P F F E+ + Sbjct: 896 GSKLFSLLNTFS--FQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLTSFEEKFNDLTT 953 Query: 350 RPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMD 409 + + L+A + L + + + + + + ++ ++ +E ++ + ML Sbjct: 954 AEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQML-- 1011 Query: 410 RHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY 469 RN KG ++ + I + L + G + + + L+ Sbjct: 1012 ------------RNIGKGVAQQSMLNIVMQLRKICNHPYLIPGTEP-----DSGSLEFLH 1054 Query: 470 PERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLRERE 527 R ++ L L +VL+ LE L Sbjct: 1055 EMR------------IKASAKLTLLHSMLKILYKEGHRVLIFSQMTKLLDILEDYLTIEF 1102 Query: 528 GIR-AAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFN 586 G + +S+ +R A A F ++ + LL + G N A ++++D FN Sbjct: 1103 GPKTYERVDGSVSVSDRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFN 1162 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC---PTGRTIY 643 P Q + R RIGQ+ + ++ + + + +++ + L + + + + Sbjct: 1163 PHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVE 1222 Query: 644 DSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDR 687 D + + G D+ N + + A LEQ + + Sbjct: 1223 DILRWGTEELFSESSSMNGKDNSDNNINKDKDDTIADLEQKQRK 1266 >UniRef50_Q9XFH4 SWI2/SNF2-like protein n=22 Tax=Embryophyta RepID=Q9XFH4_ARATH Length = 764 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 91/564 (16%), Positives = 189/564 (33%), Gaps = 49/564 (8%) Query: 146 GLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLSGAAERV 203 L +QL + +LAD++GLGKTI+ L +G Sbjct: 194 CPLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGNGLDGPY 253 Query: 204 LIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFD----TEQLVICSLDF 258 L+I P + W E+ R + ++ ++ + + +VI S + Sbjct: 254 LVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEV 313 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 A +R+ L W +V+DE H L ++ + + ++ L + LLLT TP Q Sbjct: 314 AMNDAKRI--LRHYPWKYVVIDEGHRL---KNHKCKLLRELKHL--KMDNKLLLTGTPLQ 366 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIG 378 + ++ L + P+ F +F + + + + Sbjct: 367 NNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRR-----AQVVSKLH 421 Query: 379 EQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKL 438 +L+ D E + ++E++ ++ + K F + ++ L Sbjct: 422 GILRPFILRRMKCDVELSLPRKKEII------------MYATMTDHQKKFQEHLVNNT-L 468 Query: 439 PLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD-----NATWWNFDPRVEW 493 ++ +P+ + + +G + Sbjct: 469 EAHLGENAIRGQGWKGKLNNLVIQLRKNCNHPDLLQGQIDGSYLYPPVEEIVGQCGKFRL 528 Query: 494 LMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA 551 L L + KVL+ ++ E+ G + + ER R F+ Sbjct: 529 LERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEK-GFEVCRIDGSVKLDERRRQIKDFS 587 Query: 552 EEDTGA-QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610 +E + LL + G G N A +++D +NP + Q + R RIGQ + ++ Sbjct: 588 DEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYR 647 Query: 611 PYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNC 670 ++ ++ +++ + L G+ + ++P + E L+K Sbjct: 648 LSTAQSIETRVLKRAYSKLKLEHVVIGQGQFHQER------AKSSTPLEEEDILALLKED 701 Query: 671 REQHEALK--AQLEQGRDRLLEIH 692 + L + DRLL+ Sbjct: 702 ETAEDKLIQTDISDADLDRLLDRS 725 >UniRef50_A0CVG3 Chromosome undetermined scaffold_29, whole genome shotgun sequence n=5 Tax=Paramecium tetraurelia RepID=A0CVG3_PARTE Length = 1014 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 122/839 (14%), Positives = 262/839 (31%), Gaps = 88/839 (10%) Query: 130 YRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEA 187 + + LRG L +Q+ + + +LADE+GLGKTI+ Sbjct: 110 EEDLDDAPTVLDKQPTILRGG--QLKQYQMTGVNWMISLFEEGINGILADEMGLGKTIQT 167 Query: 188 GMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF 246 + + + LI+ P++ W+ E + + E + D N F Sbjct: 168 IGFIAFLKEYTKISGPHLIVAPKSTLGNWMREFKKWL-PCARVVKLIAVKEEREDIINKF 226 Query: 247 ---DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLA 303 + + S + L+H+ + +++DEAH + ++ + Q + ++ Sbjct: 227 FQPGKFDVCLTSYEGV---NICLKHIRRFSYKYIIIDEAHKI---KNEDAIISQNLRKI- 279 Query: 304 EHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGN 363 LLLT TP Q ++ L L P+ F F + + + Sbjct: 280 -RTNYKLLLTGTPLQNTPHELWSLLNYLLPDLFDSSEVFDKWFEVNTEAKLKEGNEIIKQ 338 Query: 364 KLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRN 423 + + + + + +L+ ++ E +QE + + + + +++N Sbjct: 339 EELDQRNLEMCQKFQKILRPFMLRRTKAEVERILPPKQE-IHLFIKMTNLQKQMYQNILL 397 Query: 424 GV---KGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD 480 +G K + L PE + Sbjct: 398 HNNPHEGDDKGFYMNKLMQLRKICLHPYLF-------------------PEVEDKSLPPL 438 Query: 481 NATWWNFDPRVEWLMGYLTSHRS--QKVLVICAKAATALQLEQVLREREGIRAAVFHEGM 538 ++ L +L +VL+ LE R+ Sbjct: 439 GEHLVEVAGKMRVLDIFLKKLSDGTHQVLIFSQFTMMLNILEDYCNYRK-YDYCRIDGET 497 Query: 539 SIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL 597 I +RD A F + D+ LL + G G N A ++++D FNP + Q + R Sbjct: 498 EIQQRDDQIAEFTKPDSKKFIFLLSTRAGGLGINLATADTVIIYDSDFNPQMDMQAMDRA 557 Query: 598 DRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASP 657 RIGQ + + ++ E T + ++ L GR L Sbjct: 558 HRIGQKNRVMVYRMACEHTIEEKIIERQQIKLRWDSLMIQQGRLSQKQSGKLLSKEDLKE 617 Query: 658 DQTEGFDDL--IKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 G + + + E + L++G +++ E+ + ES +++ +L Sbjct: 618 LTAHGASQIFKLDGDDIKDEDIDILLKRGEQLTQQMN----ERIEKKFESFKDKMQSLDL 673 Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQ 775 +N+F+ + ++ D + + L F+ R+ Sbjct: 674 GLGQINIFEYFNEEKQNKMDEDAL----EDALASHL-----------FNENKTRNRDKRA 718 Query: 776 FITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRF 835 + G+++ + + L E +++ K+ F Sbjct: 719 MM------------------LGANSKKIQGKQIKLQEHHLYENKDRLQSLLQKE---EDF 757 Query: 836 LPPT-PVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQ 894 L + +D N + E Q + + + A + G+ Sbjct: 758 LAQQKTQKKGMDSEENVDCGGLTQEERQEQKQLLETGFKNWNKQEFSDFITANEKYGKDA 817 Query: 895 IEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDEL-TAIESNRQQVMESLDQ 952 EK + +E A R++ L + ++ E + + + +++ Sbjct: 818 YEKIQEFIKTKTVDEVKTYAQAFWERIDGLSEKDKIVKQIERGQKLIEQKTNGQKLIEE 876 >UniRef50_A9V9Q4 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V9Q4_MONBE Length = 1903 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 104/681 (15%), Positives = 211/681 (30%), Gaps = 87/681 (12%) Query: 66 GWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQD-----RLFAGQI 120 G + + + + ++ + + + F + R ++ Sbjct: 554 GRVLAESQDESNDRIVVLVKWLGLEHSEATWEYKDDIQDVTGFKEAMAQFEKRRKGIAEV 613 Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADE 178 R R+++ K + L +QL + + V+LADE Sbjct: 614 KPPPRRQFRFKSLKKQPSNIKH---------GELHDYQLEGLNFLIFSWMRNRNVILADE 664 Query: 179 VGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAE 237 +GLGKT++ + + LI+ P + W E + +L F + Sbjct: 665 MGLGKTLQTIAFVSWLKHTAQRGPFLIVAPLSTCPNWEREFAQWAPDLHVVTFIGGASSR 724 Query: 238 AQHDAYNPFD-------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 + + ++I + + + +WDLL VDE H L + Sbjct: 725 EVIKQHELYTPGKTRRRRFDVIITAWNVILSEAAV---FRKVKWDLLAVDEGHRL---KS 778 Query: 291 APSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR 350 S+ +E + +LLT TP Q ++ + L L+P F +F Sbjct: 779 RSSQLTTVLE--SCTSDFRILLTGTPLQNNLQELYNLLMYLNPEEF---KEFE------- 826 Query: 351 PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDR 410 +LS++E + + + +L+ +D + E+V Sbjct: 827 ----------GRERLSDEETKEEIATLKPKLKKHMLRRLKTDVFKDMPQKVEVVVP-AKL 875 Query: 411 HGTSRVLFRNTRNGVKGFPKR------ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRA 464 R ++ F L+ + + L Sbjct: 876 SSMQRRFYKELLAKNYSFLTATTQGVSSLNNLLMQLRKCANHPYLFDDAEPE-------- 927 Query: 465 RDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQV 522 ++ + + L L + +VL+ L+ + Sbjct: 928 ---------VEDHDAMVKLLVGASGKTLLLDMMLRKLKEQGHRVLIFSQMTRMLDILQDI 978 Query: 523 LREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMF 581 + R G I+ R F+ D+ A LL + G G N A +++F Sbjct: 979 MMYR-GYHCCRLDGNTDILTRQEQIDEFSRPDSDAFVFLLSTRAGGLGINLTTADTIIIF 1037 Query: 582 DLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT 641 D +NP Q + R RIGQ + + ++ T + ++R E L + Sbjct: 1038 DSDWNPHADLQALARAHRIGQKNLVMVYRFVSVNTVEERILRRAREKLRLDQAV--RMDK 1095 Query: 642 IYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQA 701 + S + L+ A E + I + +AL + Q + R + S Sbjct: 1096 LKKSELDQLLKSGAQGLFEEQDEAEIVYDDKVIDALLDRESQAKSREAQEQS-----EAE 1150 Query: 702 LAESIEEQDDDTNLIAFAMNL 722 +A++ + D + + + Sbjct: 1151 IAQAQNDLFADFKVAQLSTDA 1171 >UniRef50_Q5CVY6 Brahma like protein with a HSA domain, SNF2 like helicase and a bromo domain n=3 Tax=Cryptosporidium RepID=Q5CVY6_CRYPV Length = 1673 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 103/618 (16%), Positives = 195/618 (31%), Gaps = 79/618 (12%) Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIE 186 ++ E L+G L +Q+ + + +LAD +GLGKT++ Sbjct: 722 YFQVTHMIQEHITKQPECLKGG--QLREYQMKGLEWLVSLYNNNLNGILADAMGLGKTVQ 779 Query: 187 AGMILHQQLL-SGAAERVLIIVPETLQH-QWLVEMLRRFNLRFALFDDERYAEAQHDAYN 244 +L G LII P + H W E R F E E + + Sbjct: 780 TVSVLAHIYENKGNRGPHLIIAPLSTLHGNWENEFNRWL-PDFVKVIYEGNKEIRKQIRS 838 Query: 245 PF----DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE 300 + +++ + F + K L + +W+ ++VDEAH L ++ S+ Q + Sbjct: 839 KYMTGEAKFHVLLTTDAFIMKDKHY---LRKFDWEYIIVDEAHRL---KNPKSKLVQILN 892 Query: 301 QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML- 359 L LT TP Q ++ +A L L P+ F+ F + + Sbjct: 893 N-GFRAKHRLALTGTPLQNDLQEVWALLNYLMPSIFNSSETFQQWFNEPLSSIKSSGKTG 951 Query: 360 ------LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGT 413 + +S +E ++ + + + LL+ + + E + G Sbjct: 952 GGSDNGIVPLDISEEEQLLIVDRLHKVLRPFLLRREKIQVANEVPPKLEEIL-WCPLSGL 1010 Query: 414 SRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERI 473 + L++ + P + + L S + Sbjct: 1011 QQYLYKELESNENSGP-----NVLMQLRKVCNHPFLFSTEIQYP---------------- 1049 Query: 474 YQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRA 531 + + + L L R +VL+ LE L R + Sbjct: 1050 ------SDESIVRVCGKFVMLDSILPKLRAAGHRVLIFSQMTKLLTLLEVFLSLR-NMPF 1102 Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLL 590 +R + F E++ LL ++ G G N Q A +++FD +NP Sbjct: 1103 LRLDGTTLSEDRQESLKLFNAENSPYFVFLLSTKAGGFGINLQSADTVILFDSDWNPQND 1162 Query: 591 EQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDL 650 EQ R RIGQ ++ T + ++ LD +G Sbjct: 1163 EQAQSRAHRIGQKKEVLTLRFVTPDTVEERIMTTAGIKLDKDALIIKSGM---------- 1212 Query: 651 INYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQD 710 D +++ E ++ L + R + E+ + + L + D Sbjct: 1213 ---------YHDLYDGDDLEQKRKEKIQEILRKQRQK--EVVNCYYDS-DRLNRILARSD 1260 Query: 711 DDTNLIAFAMNLFDIIGI 728 D + + + I Sbjct: 1261 RDLEIFERVDRMRKMCHI 1278 >UniRef50_Q54NM0 SNF2-related domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q54NM0_DICDI Length = 1604 Score = 494 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 96/560 (17%), Positives = 194/560 (34%), Gaps = 35/560 (6%) Query: 151 RTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLS-GAAERVLIIV 207 L +Q+ + + +LADE+GLGKT++ + E L++ Sbjct: 621 GGKLKEYQVTGLEWLISLYTRNLNGILADEMGLGKTVQTIAFISFLYERMNVREPFLVVA 680 Query: 208 PETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRL 266 P + W+ E R L ++ ++ + P + +VI S ++ + + Sbjct: 681 PLSTISNWVSEFARWSPKLHVIVYKGKQDERRETARTIPRNAFCVVITSFEYIIKDR--- 737 Query: 267 EHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFA 326 + L W +++DE H + ++ S+ + Q H LLLT TP Q + +A Sbjct: 738 KTLGRVHWIYIIIDEGHRI---KNKNSKLSVQLRQ--YHSRNRLLLTGTPLQNDLGELWA 792 Query: 327 RLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLL 386 L L P F+ F A ++ + S +N L +++ LL Sbjct: 793 LLNFLLPTIFNSADTFQNWFNAPFQ-AKGKNLINVNEEESLIIINRLHQVLRFF----LL 847 Query: 387 QAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQT 446 + SD E ++E V + ++R+ E + + ++ Sbjct: 848 RRLKSDVESQLPDKKEKVIKC-NMSALQIAMYRSL---------VEYGVLPIDPDSKEGR 897 Query: 447 AIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQ 504 + ++ + G + + +P E++ N + + + LT Sbjct: 898 SGRL-KMKGFNNIVKQLQKICNHPYLFKDEWDI-NEDLIRTSGKFDTMDQILTKMHASKH 955 Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGA-QVLLCS 563 +VL+ +E+ +E ER + D+ +L + Sbjct: 956 RVLIFTQMTEVINLMEEYFSLKE-WTFLRLDGSTKPEERAHLVVEWNRPDSPFWIFVLST 1014 Query: 564 EIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVR 623 G G N Q A +++FD +NP + Q R RIGQ + + + + + ++ Sbjct: 1015 HAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNSVSVFRLISANSIEEKILG 1074 Query: 624 WYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHE--ALKAQL 681 + L+ G S + L + L + + E L A+ Sbjct: 1075 RATDKLEIDAKIIQAGMFNTHSNDQERRAKLEQFLHGFPNNTLDEVPVDLKEINKLIARD 1134 Query: 682 EQGRDRLLEIHSNGGEKAQA 701 + + E+ + QA Sbjct: 1135 DFEFKQFQEMDKERLKVDQA 1154 >UniRef50_Q22516 Chromodomain-helicase-DNA-binding protein 3 homolog n=3 Tax=Chromadorea RepID=CHD3_CAEEL Length = 1787 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 98/613 (15%), Positives = 192/613 (31%), Gaps = 83/613 (13%) Query: 138 EQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQL 195 +++ + + +L P+QL + + + +LADE+GLGKT+++ L+ + Sbjct: 600 KKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLM 659 Query: 196 LSGA-AERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFD------ 247 G LI P + W E + + +R + + Sbjct: 660 KEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVR 719 Query: 248 --------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPS 293 +++ S + K L +W LVVDEAH L ++ S Sbjct: 720 GGPKVSKIKTLENLKFHVLLTSYECINMDKAI---LSSIDWAALVVDEAHRL---KNNQS 773 Query: 294 REYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY--RP 351 ++ + + ++ +LLT TP Q +E F L L P+RF+ F E Sbjct: 774 TFFKNLRE--YNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEISKED 831 Query: 352 VADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRH 411 + + LL + L + ++L M +Q++ ++ + + ++ L Sbjct: 832 QIEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDAL---- 887 Query: 412 GTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE 471 N G + L I + L ++ + Sbjct: 888 -----------NVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYE----- 931 Query: 472 RIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGI 529 + + L L + +VL+ LE + EG Sbjct: 932 ---------GSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDF-CDVEGY 981 Query: 530 RAAVFHEGMSIIERDRAAAWFAEEDTG-AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPD 588 + ++ +R A + LL + G G N A ++++D +NP Sbjct: 982 KYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPH 1041 Query: 589 LLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC--PTGRTIYDSV 646 Q R R+GQ H + I+ + + + + + + G S+ Sbjct: 1042 NDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAGLGAKDGKSM 1101 Query: 647 YNDLINYLASPDQTEGFDDLIKNCREQHEA--------------LKAQLEQGRDRLLEIH 692 ++ + E F + A ++ DR E Sbjct: 1102 SKTELDDVLRWGTEELFKEEEAPVEGADGEGTSSKKPNEQEIVWDDAAVDFLLDRNKEEE 1161 Query: 693 SNGGEKAQALAES 705 GEK + Sbjct: 1162 GQDGEKKEHWTNE 1174 >UniRef50_Q9NRZ9 Lymphoid-specific helicase n=68 Tax=Coelomata RepID=HELLS_HUMAN Length = 838 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 109/712 (15%), Positives = 223/712 (31%), Gaps = 79/712 (11%) Query: 73 EVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRA 132 E + + + +E ++ + + L + Sbjct: 131 REDESYNISEVMSKEEILSVAKKNKKENEDENSSSTNLCVEDLQKNKDSNSIIKDRLSET 190 Query: 133 RKYSSEQFRMPYSGLRGQRTS-----------LIPHQLNIAHDV--GRRHAPRVLLADEV 179 + +++ F P GQ + +Q+ + + +LADE+ Sbjct: 191 VRQNTKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEM 250 Query: 180 GLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRF-NLRFALFDDERYAEA 238 GLGKT++ + + G L+ P + W+ E R ++ L+ + Sbjct: 251 GLGKTVQCIATIALMIQRGVPGPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQ 310 Query: 239 QHDAYNPFDT-----EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPS 293 + +VI S + A R + L+H W L+VDE H + ++ Sbjct: 311 KLVRNIYKRKGTLQIHPVVITSFEIAMRDRNALQH---CYWKYLIVDEGHRI---KNMKC 364 Query: 294 REYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ------- 346 R + +++ + LLLT TP Q + ++ L L P+ F D F Sbjct: 365 RLIRELKRF--NADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSE 422 Query: 347 --------KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQS 398 + + V + +L L + ++ E+ ++++ + + Sbjct: 423 TAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTA 482 Query: 399 ARQELV--------SMLMDRHGTSRVLFRNTRN----GVKGFPKRELHTIKLPLPTQYQT 446 + ++ T R R ++ + FP I P + Sbjct: 483 IVNRTIANMFGSSEKETIELSPTGRPKRRTRKSINYSKIDDFPNELEKLISQIQPEVDRE 542 Query: 447 A--------------IKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVE 492 +K+ IM + + + YP + + + Sbjct: 543 RAVVEVNIPVESEVNLKLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFL 602 Query: 493 WLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF 550 L L R KVL+ + L R+ + MS ER++ F Sbjct: 603 ILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRD-FNFSRLDGSMSYSEREKNMHSF 661 Query: 551 AEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610 + L+ + G G N A ++++D +NP Q R RIGQ + ++ Sbjct: 662 NTDPEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYR 721 Query: 611 PYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI------NYLASPDQTEGFD 664 T +V + +L L ++ ++ Sbjct: 722 LVTANTIDQKIVERAAAKRKLEKLIIHKNHFKGGQSGLNLSKNFLDPKELMELLKSRDYE 781 Query: 665 DLIKNCREQ--HEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTN 714 IK RE+ + L D + +++++G K + I E +D++ Sbjct: 782 REIKGSREKVISDKDLELLLDRSDLIDQMNASGPIKEKMGIFKILENSEDSS 833 >UniRef50_UPI000034F14B chromatin remodeling factor, putative n=1 Tax=Arabidopsis thaliana RepID=UPI000034F14B Length = 1202 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 102/673 (15%), Positives = 230/673 (34%), Gaps = 85/673 (12%) Query: 70 QVEEVKEENGLLTYIGTRLDTE-ESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFAL 128 ++ +E + Y+ + + E + F R + Sbjct: 146 RIIACREGDDGEEYLVKYKELSYRNSYWESESDISD---FQNEIQRFKDINSSSRRDKYV 202 Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIE 186 + +QF + L G +L +QL + + V+LADE+GLGKTI+ Sbjct: 203 ENERNREEFKQFDLTPEFLTG---TLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQ 259 Query: 187 AGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNP 245 + L + L++ P + W E ++ ++ + A + Sbjct: 260 SIAFLASLFEENLS-PHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEF 318 Query: 246 F------DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAI 299 + +++ + + + L +W +++DE H L ++ S+ Y ++ Sbjct: 319 YFSEGRKSKFDVLLTTYEMV---HPGISVLSPIKWTCMIIDEGHRL---KNQKSKLYSSL 372 Query: 300 EQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML 359 Q ++LLT TP Q + FA + LD ++F +F + Sbjct: 373 SQFT--SKHIVLLTGTPLQNNLNELFALMHFLDADKFGSLEKFQD--------------- 415 Query: 360 LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 ++++ L +M+ + L + D ++EL+ +D + +++ Sbjct: 416 ----INKEEQISRLHQMLAPHLLRRLKKDVLKDKV---PPKKELILR-VDMSSQQKEVYK 467 Query: 420 ----NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ 475 N + ++ + + L + ++ Sbjct: 468 AVITNNYQVLTKKRDAKISNVLMKLRQVCSHPYLLPDFEP-----------------RFE 510 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAV 533 + +++ L + + +VL+ T LE + Sbjct: 511 DANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFK-NWNYER 569 Query: 534 FHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQ 592 +S ER F E++ LL + G G N A ++++D +NP Q Sbjct: 570 IDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQ 629 Query: 593 RIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLIN 652 + R+ R+GQ + + I+ + T + ++ + D + +D+I Sbjct: 630 AMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVGKQHLCQDEL-DDIIK 688 Query: 653 YLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDD 712 Y + +E D+ ++ + ++ A +EQ DR A+ S++++++ Sbjct: 689 YGSKELFSEENDEAGRSGKIHYDD--AAIEQLLDR---------NHVDAVEVSLDDEEET 737 Query: 713 TNLIAFAMNLFDI 725 L F + F+ Sbjct: 738 DFLKNFKVASFEY 750 >UniRef50_B2VWL1 Chromodomain-helicase-DNA-binding protein 4 n=2 Tax=Pleosporineae RepID=B2VWL1_PYRTR Length = 1735 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 119/709 (16%), Positives = 219/709 (30%), Gaps = 66/709 (9%) Query: 65 DGWQMQVEEVKEEN-GLLTYIG-TRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR 122 ++ +KE + L+ Y G DT V E + L F + AG+ + Sbjct: 634 RSEEIDKARIKEVDKALIKYKGLGYEDTVWESVPTPE-DGERWLDFVTAYNDWVAGRYVK 692 Query: 123 MDRFA----LRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLA 176 + + +AR + L+ +QL + + + +LA Sbjct: 693 IPKQGPLKGRLEKARSMPFAKLEREKQPDNLVGGELMKYQLEGLNWLYYKWYEQKNAILA 752 Query: 177 DEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERY 235 DE+GLGKTI+ + + LI+VP + W E+ + +LR + Sbjct: 753 DEMGLGKTIQVIAFMATLIQEHNCFPFLIVVPNSTCANWRREIKQWAPSLRVVAYFGSAK 812 Query: 236 AEAQHDAYNPFD------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSE 289 A Y F +V+ S D A + W LVVDE L + Sbjct: 813 AREMAYQYEMFPEKTKDLRCHVVVTSYD-AAADDNCRKFFKSVSWAGLVVDEGQRL---K 868 Query: 290 DAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY 349 + S+ Y A+ A P LLLT TP Q F L LD + A+ E+ Sbjct: 869 NDKSQLYTALT--AVRAPFRLLLTGTPLQNNARELFNLLHFLDDTI--NAAELEEQYA-- 922 Query: 350 RPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMD 409 + + Q +L+ + +++ + Sbjct: 923 ------------------EMTAENIRELHNQIRPFILRRTKAKVLTFLPPLGQIILPI-S 963 Query: 410 RHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY 469 + ++++ + K Q + A + +M RK Sbjct: 964 MSHLQKQVYKSILSKSPELLKALF--TSDKQLKQQERANLSNILMQLRKCLCHPFVYSRE 1021 Query: 470 PERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLRERE 527 E + ++ L L R +VL+ +E L + Sbjct: 1022 IEERSDVAAVSHRNLVEASAKLSLLEMLLPKLHERGHRVLIFSQFLDMLNIIEDFL-DGM 1080 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFN 586 + M +E+ + F D+ LL + G G N A +++ D +N Sbjct: 1081 QLPYQRLDGTMGSLEKQKRIDQFNAPDSPLFAFLLSTRAGGVGINLATADTVIILDPDWN 1140 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSV 646 P Q I R RIGQ + + + + +++ + + + + Sbjct: 1141 PHQDLQAIARAHRIGQKNKVLCLQLATRASVEEKIMQMGKKKMALDKVVVQDLDR--EDP 1198 Query: 647 YNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESI 706 ++ + + E F D + A +++ DR ++ G+ Sbjct: 1199 EDEDVESILKYGAAELFKD--DDADHDIRYDDASIDKLLDRSQIENTKTGDD-------- 1248 Query: 707 EEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLS 755 D + FA + G QDD + P + Sbjct: 1249 ---DSAESQFGFARIWVNEKGTLQDDFDTVDEEIAPDPGVWDKILKERQ 1294 >UniRef50_A2EX18 F/Y-rich N-terminus family protein n=1 Tax=Trichomonas vaginalis RepID=A2EX18_TRIVA Length = 1656 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 100/600 (16%), Positives = 187/600 (31%), Gaps = 69/600 (11%) Query: 148 RGQRTSLIPHQLNIAHDVGRRHA--PRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVL 204 L +QL + + + +LADE+GLGKTI+A + + Sbjct: 210 YKNGLQLFNYQLEGVNWLLKNWYSDINCILADEMGLGKTIQAVAFFERIHRVEKLPGPYM 269 Query: 205 IIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD------TEQLVICSLDF 258 +I P W ++ +L + R A Y + + + S + Sbjct: 270 VIAPLATLPHWQRQIESWTDLYVIRYTGNRQAREMLREYEFYKSNSEQVKFDIFLTSYEV 329 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 + L H + VVDEAH L ++ S+ AI+ L +LLT TP Q Sbjct: 330 LYKDVDELRHFKFPAF---VVDEAHRL---KNKNSKILSAIQHL--KTSFRVLLTGTPLQ 381 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIG 378 +E + L L P F D L+ND + + Sbjct: 382 NSIEELQSLLEFLHPGEFSD--------------------------LNNDMDAQDIQKLR 415 Query: 379 EQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPK--RELHTI 436 + LL+ D++ + + ++E + + +R F L I Sbjct: 416 VRLQPHLLRRLKVDTDQSIAPKEETIIECT-MTKYQKQFYRAILEQNSSFLSGGTNLLNI 474 Query: 437 KLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMG 496 + L + G + + + ++ + Sbjct: 475 AMDLRKVCIHPFLIKGAEDKILADMG----------YTNQPDKALEAIIRSSGKMILIDK 524 Query: 497 YLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEED 554 L + +VL+ L+ L G + + R F D Sbjct: 525 LLPKLKADGHRVLIFSQMTNLLDILQDYL-AATGYKFLRLDGQVKPSVRQSLIDHFNAPD 583 Query: 555 TGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYL 613 + LL + G G N A +++FD +NP Q R RIGQ ++++ Sbjct: 584 SDDFIFLLSTRAGGLGINLNAADTVIIFDSDWNPQNDLQAQARCHRIGQQKTVKVYRLIT 643 Query: 614 EKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQ 673 + T + + + L G I D ++ L +D+ ++ Sbjct: 644 KGTYEQNMFEISSKKLGL-------GHAILDKTKKKELDTLLRKGAYYALNDVEEDT--F 694 Query: 674 HEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDR 733 E Q+ ++ + G ++A + E + D N F + +++ Sbjct: 695 GEDDIDQILSRSKTMVINEAAGSMFSKAQFDVDENTNIDINDPEFWQKILPNAQAAEEEE 754 >UniRef50_B7G0W1 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G0W1_PHATR Length = 970 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 106/651 (16%), Positives = 198/651 (30%), Gaps = 99/651 (15%) Query: 153 SLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLS-GAAERVLIIVPE 209 +L P+QL + + +LADE+GLGKT+++ +L LI VP+ Sbjct: 118 TLKPYQLEALNWMIHLSEKGLNGILADEMGLGKTLQSISVLAYHWEFLRIQGPHLICVPK 177 Query: 210 TLQHQWLVEMLRRFN-LRFALFDDERYAEA------------------------------ 238 + W+ E+ R LR F R Sbjct: 178 STLSNWMNELKRWCPSLRAIKFHGSREEREYMIDNMFHNEAATHDGRRPDRQIMDGSGEL 237 Query: 239 QHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA 298 D + + + + + A ++ L+ W LV+DEAH L ++ S + Sbjct: 238 IDDNTDTPRPWDVCVTTYEVANAERKTLQKFT---WKYLVIDEAHRL---KNDASMFSKT 291 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAM 358 + LLLT TP Q + +A L L P+ F QF E +A Sbjct: 292 VRSF--RTSNRLLLTGTPLQNNLHELWALLNFLLPDIFSSADQFDEWFDLEIDDEEAKKN 349 Query: 359 LLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLF 418 +++ + + +L+ +D + E + ++ + L+ Sbjct: 350 MISQ--------------LHKILRPFMLRRLKADVAKGLPPKTETIL-MVGMSKIQKQLY 394 Query: 419 RNTR--------NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP 470 + V G + + I + L G+ Sbjct: 395 KKLLLRDLDSITGKVSGKNRTAVLNIVMQLRKCCGHPYLFEGVED--------------- 439 Query: 471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREG 528 + + ++ + L R +VL+ LE + R G Sbjct: 440 ----RTLDPLGEHLVENCGKLSMVDKLLKRLKSRGSRVLIFTQMTRVLDILEDFMVMR-G 494 Query: 529 IRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNP 587 + + +R+ + F E T LL + G G N Q A +++D +NP Sbjct: 495 YQYCRIDGNTNYDDRESSIDEFNREGTDKFCFLLSTRAGGLGINLQTADTCILYDSDWNP 554 Query: 588 DLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGR-TIYDSV 646 Q R R+GQ + + E T + +V + L GR D V Sbjct: 555 QQDLQAQDRCHRLGQKKPVNVFRLVSENTVEEKIVERAQQKLKLDAMVVQQGRLKDQDKV 614 Query: 647 YNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESI 706 D I F + D +LE + ++ ++ Sbjct: 615 TKDEIMAAVRFGADTVFRSEESTITDDD----------IDVILERGAAKTKELAEKIQTR 664 Query: 707 EEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSED 757 ++ D + ++ G++ D+ + + + Sbjct: 665 DKGDLLDFRLDGGISAQTFEGVDYSDKDLRDHLRMLAADSMGKRERRPPPT 715 >UniRef50_B3S405 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S405_TRIAD Length = 1351 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 98/580 (16%), Positives = 191/580 (32%), Gaps = 48/580 (8%) Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGR--RHAPRVLLADEVGLGKTIE 186 Y E+ R L +L +QL + ++ +LADE+GLGKTI+ Sbjct: 514 YYSIAHMHQEEVREQPKML--INGTLKYYQLQGLEWLVSLLNNSLNGILADEMGLGKTIQ 571 Query: 187 AGMILHQQLLS-GAAERVLIIVPETLQHQWLVEMLRRFNLRFAL-FDDERYAEAQHDAYN 244 +L + LIIVP + W+ E + + + Sbjct: 572 TIALLAYLIEKKNMTGPFLIIVPLSTLSNWVFEFNKWAPAIVKIAYKGSPLIRKAMHPKI 631 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAE 304 + + + ++ + + L + +W LVVDE H + ++ + Q + A Sbjct: 632 RSGRFNVCLTTYEYVIKDRSV---LSKVKWKYLVVDEGHRM---KNHNCKLTQVLNS-AY 684 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNK 364 P LLLT TP Q + ++ + + P+ F F + + Sbjct: 685 LAPHRLLLTGTPLQNHLPELWSLMNFVLPSIFKSCNSFEQWFNAPFATTGEKV------E 738 Query: 365 LSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG 424 L+ +E ++ + + + LL+ + E + E V+ + R+L+ + + Sbjct: 739 LNEEETILIIQRLHKVLRPFLLRRLKREVESQLPEKTEYVAKC-EMSALQRLLYDHMQK- 796 Query: 425 VKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATW 484 L + G + + +P E + + Sbjct: 797 ----------QGVLLTDGSEKDRKGHGGTKALMNTIMQLRKICNHPFLFQHIEEALSEHF 846 Query: 485 WNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERD 544 V VL+ C +E L R G R +R Sbjct: 847 GMKGGLVT------------GVLIFCQMTNLMTIMEDYLVWR-GFRYLRLDGTTKAEDRG 893 Query: 545 RAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 + A F E++ LL + G G N Q A +V+FD +NP Q R RIGQ Sbjct: 894 QLLALFNAENSPYFIFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQ 953 Query: 604 HDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDL---INYLASPDQT 660 +++++ ++ + ++ L+ E G S + + + + + Sbjct: 954 NEVRVLRLMTVQSVEEKILAAARYKLNVDEKVIQAGMFDQKSTGRERRAFLQAILVHETS 1013 Query: 661 EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ 700 E + + + ++ E+ D + E Sbjct: 1014 EEEEGTEVPDDDMINQIISRSEEEFDLFQRMDVERREFED 1053 >UniRef50_C9ZIW1 Transcription activator, putative n=7 Tax=Trypanosomatidae RepID=C9ZIW1_TRYBG Length = 1160 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 109/627 (17%), Positives = 204/627 (32%), Gaps = 71/627 (11%) Query: 146 GLRGQRTSLIPHQLNIAHDVG--RRHAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAER 202 R L P+Q+ + + +LADE+GLGKT++ L G Sbjct: 166 SPSYIRGKLRPYQIEGVNWLLGLYSRCINGILADEMGLGKTLQTISTLAYLKFSHGLPGP 225 Query: 203 VLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQ--HDAYNPFD--TEQLVICSLD 257 L++ P+++ W E+ + L F Q P +++ + + Sbjct: 226 HLVVCPKSVMGNWYREVRQWCPALSVLKFHCSSNIRPQLVRAHLMPCGNIKYDIIVTTFE 285 Query: 258 FARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPE 317 + + W L+VDEAH L ++ R + + + + L++T TP Sbjct: 286 MVL---EEHGAFRKIPWQYLIVDEAHKL---KNEEGRAHVTLGSI--NANYRLIITGTPL 337 Query: 318 QLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMI 377 Q ++ +A L L P F D F D+ A+ + Sbjct: 338 QNNLKELWALLHFLTPRLFDDSKSFDSWFDTASGQEDSEAL----------------SNM 381 Query: 378 GEQDIEPLLQAANSDSEDAQSARQELVSML----MDRHGTSRVLFRN--TRNGVKGFPKR 431 + +++ S+ ++E+ + R +VL ++ N G Sbjct: 382 HQILAPLMIRRLKSEVSTGIPPKKEIYVSCRLSKVQRRWYMQVLAKDAEVLNKGSGGSSA 441 Query: 432 ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRV 491 L + L + G D + ++ Sbjct: 442 FLTNTLMSLRKVINHPYMMDGGEEGPPFITD-------------------ERIVKYSGKM 482 Query: 492 EWLMGYL-----TSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRA 546 L L KVL+ + LE R G + S +RD Sbjct: 483 LLLDKLLHRLRRDEKEGHKVLIFSQFTSMLDILEDYCSMR-GFKVCRIDGSTSGYDRDSQ 541 Query: 547 AAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD 605 A F + LL + G G N Q A++++++D +NP + Q R RIGQ Sbjct: 542 MAAFNAPKSDYFIFLLSTRAGGLGINLQAANNVIIYDSDWNPQMDLQAQDRAHRIGQKRV 601 Query: 606 IQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDD 665 ++++ + T + + + L GR N+L G ++ Sbjct: 602 VRVYRFVTDGTVEERIYHRALKKLYLDAMVVQQGRASGGGNGNNLSREELLSMIKFGAEE 661 Query: 666 LIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDI 725 + K E E D L + E A+ + ++ L A N++D Sbjct: 662 IFKAKDEDIT------EADIDCLFDDDRKSRELNDAVRQQVQMSLASFKLGADETNIYDF 715 Query: 726 IGINQDDR-GDNMIVLTPSDHMLVPDF 751 G++ + ++ +T SD + + Sbjct: 716 EGVSFREGVESRLLHITLSDPVSQDEL 742 >UniRef50_B7G256 Predicted protein n=4 Tax=Eukaryota RepID=B7G256_PHATR Length = 1431 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 112/594 (18%), Positives = 203/594 (34%), Gaps = 68/594 (11%) Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRR--HAPRVLLADEV 179 +D A A ++++ R S L + + P+QL + + R + +LADE+ Sbjct: 291 DVDDAAALEEADEHAATYLRTQPSTLAFGK--MRPYQLEGLNWMIRLQENGVNGILADEM 348 Query: 180 GLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAE 237 GLGKT+++ IL L + LI+VP++ W+ E+ R L+ F ++ Sbjct: 349 GLGKTLQSISILVYMLEFQNVSGPHLILVPKSTLSNWMNEIARWAPTLKAIRFHGDKVTR 408 Query: 238 AQH-------DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 + + +V+ + + K L W L++DEAH L ++ Sbjct: 409 EEIIRSKLEPAMRDEDREWNVVVTTYEICNIEKNTLNKFA---WSYLIIDEAHRL---KN 462 Query: 291 APSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR 350 S + + +LLT TP Q + +A L L P+ F QF E Sbjct: 463 EASAFSKTVRLF--ETRYRVLLTGTPLQNSLHELWALLNFLVPDVFESAEQFDEWFNLDI 520 Query: 351 PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDR 410 NDE N L + + +L+ +D E + + E + Sbjct: 521 E--------------DNDEKNKLISQLHKILRPFMLRRLKADVEKSLPPKHETILF-TGM 565 Query: 411 HGTSRVLFRNTR----NGVKGFP--KRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRA 464 + L+R+ + V+G + + I + L G Sbjct: 566 SAMQKKLYRDILIRDIDAVQGTSGSRTAILNIVMQLRKCAGHPYLFPGTED--------- 616 Query: 465 RDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQV 522 + ++ L L R +VL+ +E Sbjct: 617 ----------RSLPPLGEHLVENCGKMVVLDKLLKRLHERGHRVLLFTQMTRVLDIMEDY 666 Query: 523 LREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMF 581 L R S +R+ + ++ LL + G G N Q A ++++ Sbjct: 667 LVMRR-FPYCRIDGNTSYEQREEYIDAYNAPNSEKFIFLLSTRAGGLGINLQTADVVILY 725 Query: 582 DLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGR- 640 D +NP Q R RIGQ +Q+ E T + +V + L GR Sbjct: 726 DSDWNPQADLQAQDRAHRIGQKRAVQVFRLVTEHTVEEKIVERAQQKLKLDAMVVQQGRL 785 Query: 641 TIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSN 694 D + ++ + + F + + L L+QG+ + E++ Sbjct: 786 KDKDKLSHEELLAAVRFGADKIFKSKDSSITDDDIDLV--LDQGKQKTQELNDK 837 >UniRef50_C1E0M1 SNF2 super family n=1 Tax=Micromonas sp. RCC299 RepID=C1E0M1_9CHLO Length = 1271 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 115/611 (18%), Positives = 198/611 (32%), Gaps = 69/611 (11%) Query: 132 ARKYSSEQFRMPYSGLRGQ--RTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEA 187 A E+ + S L G + ++ +QL + + +LADE+GLGKTI+ Sbjct: 487 AHSADVEEIDVQPSILVGPNGKGTMRSYQLAGLQWMVSLYNNQLNGILADEMGLGKTIQC 546 Query: 188 GMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRF-NLRFALFDDERYAEAQ-HDAYN 244 +L G LI+ P+ + W E F + ++D + A + + Sbjct: 547 ISLLAYLAENKGVKGPHLILAPKAVLPNWAREFKVWFPDCDVVMYDGYKDARREMREKVV 606 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAE 304 +++ D A K L + EW+ +VVDE H L ++ S+ ++ A Sbjct: 607 NEGAFNVLLTHYDLAMYDKTW---LSKIEWNYIVVDEGHRL---KNHQSKLSGVLQA-AY 659 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNK 364 LLLT TP Q + ++ L L P+ F+ F +L + Sbjct: 660 TASHRLLLTGTPIQNNLTELWSLLNFLLPSVFNSTDAFEAWFNAPFAANKEDVVLKEEEE 719 Query: 365 LSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG 424 L L Q + P L + + + +E ++ + +R G Sbjct: 720 L-------LIIQRLHQVLRPFLLRRKKNEVEKELPEKEEETIKCAMSAWQKAYYRQVVKG 772 Query: 425 ---VKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDN 481 R L + L ++D PE I Sbjct: 773 TVTNTEGKVRVLQNTAMQLRKVCNHPYLF--------LSDDLFYQPSGPEEIL------- 817 Query: 482 ATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMS 539 + E L L + +VL+ + L R+ Sbjct: 818 ----RASGKFEILDRILPKLKRSGHRVLLFSQMVKCLDIIGDYLDWRK-YTYLRLDGSTG 872 Query: 540 IIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLD 598 R F D+ +L + G G N Q A +++FD +NP + Q R Sbjct: 873 TDARADLLDKFNAPDSPYFLFMLSTRAGGMGLNLQTADTVIIFDSDWNPQMDAQAEDRAH 932 Query: 599 RIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTG---------------RTIY 643 RIGQ ++I + T + ++R +E G + I Sbjct: 933 RIGQKRRVKILTMVCDGTIEEDILRKANEKRAIDHKAIQAGMFNQRSTAEERNSVLKEIL 992 Query: 644 DSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQ-------GRDRLLEIHSNGG 696 + L + L + ++ E E + + E+ GR RL+E H Sbjct: 993 ARDDDRLGSNLPTDEEINIMIARSDEEVELFEEMDRERERADSKKHPGRSRLMEYHEIPK 1052 Query: 697 EKAQALAESIE 707 E S+E Sbjct: 1053 EVRDRDVASVE 1063 >UniRef50_UPI000180CDBD PREDICTED: similar to helicase, lymphoid-specific n=2 Tax=Ciona intestinalis RepID=UPI000180CDBD Length = 1444 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 96/595 (16%), Positives = 205/595 (34%), Gaps = 43/595 (7%) Query: 154 LIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 L +Q+ + + +LADE+GLGKTI+A ++ + + G L+ P T Sbjct: 851 LRDYQITGYQWLKIMYENGESGILADEMGLGKTIQAIAMVCKLVEVGVNGPFLVCAPTTT 910 Query: 212 QHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTE------QLVICSLDFARRSKQR 265 W E ++F + +L A ++ +VI S + R + Sbjct: 911 VANWFNEF-KKFAPKISLMLYHGTAPERYHLIETLMEHLNDKTQVVVITSYEILLRDRP- 968 Query: 266 LEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHF 325 L + W L++DE H + +++ SR + +++L + G L+LT TP Q + + Sbjct: 969 --ALMKHSWGYLILDEGHRV---KNSNSRTIKELKKLT--IRGKLMLTGTPIQNNLTELW 1021 Query: 326 ARLRLLDPNRFHDFAQFVEEQ-----KNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 + L L P F D A F + V + +L L + ++ ++ ++ Sbjct: 1022 SLLNFLLPAVFDDMAIFRSWFNLDVLQKDEKVLSMLHQVLTPFLLRRSKSDVDIKIPPKR 1081 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLM--------DRHGTSRVLFRNTRNGVKGFPK-- 430 ++ + A + ++ + L+ L + +K Sbjct: 1082 EMLVMAPLACLQEKFYRATVDRSIRHLLINKDYFNITPGVAHPDLIASNSQEMKDETSLK 1141 Query: 431 ----RELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWN 486 R + + + ++ ++ + + + YP + + + Sbjct: 1142 YPTTRRSMKRTIEPDDDFVVNVTLNNMIMQLRKCCNHPYLIQYPLQPGTDIFKVDEDLIT 1201 Query: 487 FDPRVEWLMGYLT--SHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERD 544 ++ L L R KVL+ + L+ R+ F +R Sbjct: 1202 SCGKMMLLDRMLPVLKERKHKVLLFSQMTSMLDVLQDYCVMRK-FSFVRFDGSTKCEDRF 1260 Query: 545 RAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAH 604 F + LL + G G N A ++++D +NP Q R RIGQ Sbjct: 1261 AYIEEFNNDPNVFLFLLSTRAGGLGINLTGADTVIIYDSDWNPQNDSQAQDRCHRIGQER 1320 Query: 605 DIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGF- 663 + ++ T ++ E + +L ++ + Sbjct: 1321 PVMVYRMVTMATIDQQIMERAARKRTM-EKMIMHEDKFKGKLAMELNKVVSPDELLTLLQ 1379 Query: 664 DDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF 718 + + E E++ + ++ +++L+ S ++ ES + D+ F Sbjct: 1380 SNSLDRVAENKESIIS--DEELNQMLDRSSLKQDQPTMEDESHQSTITDSPKARF 1432 >UniRef50_C1DZK6 SNF2 super family n=2 Tax=Micromonas RepID=C1DZK6_9CHLO Length = 2637 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 100/599 (16%), Positives = 190/599 (31%), Gaps = 33/599 (5%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLL-SGAAERV 203 + L +QL + R +LADE+GLGKT+++ L G Sbjct: 477 PESIKAVLREYQLEGIRWLVRMFDDGCSCILADEMGLGKTLQSISFLAALRELRGVDGPH 536 Query: 204 LIIVPETLQHQWLVEMLRRFN-LRFALFDD---ERYAEAQHDAYNPFDTEQLVICSLDFA 259 L+I P ++ W+ E+ + LR + + + + + + + A Sbjct: 537 LVICPLSVLSSWMDELQKWCPKLRVVRLHSTDEGERQRLRKEVVMNVASYDVAVTTYEMA 596 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 L + W +++DE H + ++ + + + ++ LLLT TP Q Sbjct: 597 CNPTFNLTLSQKVYWRTMILDEGHKV---KNEDTAAHSVLSRVHRQ--HTLLLTGTPVQN 651 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 + +A L L P+ F A F E + + V + +L + GE Sbjct: 652 NLHELYAILSFLHPDVFTKSAAFDEAF-DLGTSSHKVDADKLDFAHYLMKPFVLRRVKGE 710 Query: 380 QDIEPLLQAANSDSEDAQSARQELVSMLM--DRHGTSRVLFRNTRNGVKGFPKRELHTIK 437 ++ + A+ L+ + + V R G Sbjct: 711 VEVSLPEKTETKIMCPLSPAQTFWYRRLLMRESSALTSVEAAELRKASGGGSGAMDDGGG 770 Query: 438 LPLPTQYQTAIKVSGIMG---ARKSAEDRARDMLYPERI----YQEFEGDNATWWNFDPR 490 P K + + +P E + Sbjct: 771 TDSPEPSGAGGKKENAGDFKKLQSLLMQLRKCCNHPYLFAGTDVPEDGVPVEELVEASGK 830 Query: 491 VEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAA 548 + L L + +V++ + L L R G + A + ++R A Sbjct: 831 LAVLDRILKRLKDQGHRVVLFSQFTSMLDILSDFLTLR-GYQFARLDGSTNRVQRSIDIA 889 Query: 549 WFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 F ++ LL + G G N Q A V++D +NP + Q + R+ RIGQ + Sbjct: 890 AFNRPNSPMFAFLLSTRAGGLGVNLQTADTCVLYDSDWNPQVDTQAMARVHRIGQKKPVH 949 Query: 608 IHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLI 667 ++ T + + + + L E G T + G D + Sbjct: 950 VYRLVTAGTVEERMQQRAEKKLFL-EQMVSRGSTKQAENMEGVDKNDLYGMLRFGVDAIF 1008 Query: 668 KN------CREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM 720 E L + G DR E+ + E +A+ E + + + + + Sbjct: 1009 SKDAGEPPTDADLEILMDRTPGGADRRKELANLQSEVQHTVADFAEGKAEAAPISTYVL 1067 >UniRef50_A2DZY5 SNF2 family N-terminal domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2DZY5_TRIVA Length = 1325 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 100/635 (15%), Positives = 206/635 (32%), Gaps = 54/635 (8%) Query: 147 LRGQRTSLIPHQLNIAHDVGRRHA--PRVLLADEVGLGKTIEAGMILHQQLLS-GAAERV 203 L L +Q + + +LADE+G+GKTI+A ++ Sbjct: 182 LFSNNNQLKNYQYVGVQWLFDKWKIQKGGILADEMGMGKTIQALALMQTLKFFFKVKGPF 241 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD--------TEQLVICS 255 L+I P + W E NL ++ + + F+ +L+I Sbjct: 242 LVICPLSTAFNWQKECNAWTNLNSIVYTGNDESRNTIKNFCIFNEKSKDKKMKVELIIVP 301 Query: 256 LDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTAT 315 D A R + + + + +DEAH L + S+ YQA+ ++ H LLT T Sbjct: 302 YDNAIRD---ISFFQKFRFAVQFIDEAHRL---KSYHSKTYQALSKIPTHCSF--LLTGT 353 Query: 316 PEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR-PVADAVAMLLAGNKLSNDELNMLG 374 P Q +E + L +DP F + + + ++ LL L + Sbjct: 354 PIQNDLEELISLLHFIDPTAFSNIEELASKYNTSDFDQMKELSSLLENYILRRKKDTFEK 413 Query: 375 EMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELH 434 + +++I ++ + + + L+ GTS + Sbjct: 414 SIKPKEEIVINVELTHEQRLIYKLLLDDHRDELLQTLGTSSL--------------TSFK 459 Query: 435 TIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRV--E 492 I + L + + + + + E+ D + ++ Sbjct: 460 NISMELRKICNHPFLTHETLVKEQYKQRKGINREMTEQ------EDMESLVGVSGKMILL 513 Query: 493 WLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAE 552 + KVL+ +++ L R +S+ R + F Sbjct: 514 DKLLPKLKEGGHKVLIFSQMTKVLDIIQRFLDWR-NFHYERLDGSVSVERRSESIERFTT 572 Query: 553 EDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPY 612 D LL + G +G N A ++++D +NP Q + R RIGQ +++++ Sbjct: 573 FDDSFVFLLSTRAGGQGINLTVADTVIIYDSDWNPQNDIQAMARCHRIGQDKEVKVYRLI 632 Query: 613 LEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCRE 672 + + + + L G + + L D + Sbjct: 633 TKNSYEEEMFERASMKLGLD-KVITDGFDDSNLNAEQMDMMLRKGAYYILKDQDDDAIDK 691 Query: 673 QHEALKAQLEQGRDRLLEIHSNGGEKAQ---ALAESIEEQDDDTNLIAFAMNLFDIIGIN 729 Q+ R + + H+ + ++ E+ + D F + D Sbjct: 692 FCAEDIDQILLRRTKTVVDHATDSKLSKISFDTNENEVDFGADNFWSQFFTSSADTPLGK 751 Query: 730 QDDRGDNMIVLTPSDHMLVPD-----FPGLSEDGI 759 + +R N+ P++ ++ FP + + G+ Sbjct: 752 RRNRPVNVYA--PAEKLMKKKEFKVVFPQIKDSGL 784 >UniRef50_Q7YYQ2 SNF2 helicase, possible n=4 Tax=Cryptosporidium RepID=Q7YYQ2_CRYPV Length = 1102 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 101/647 (15%), Positives = 206/647 (31%), Gaps = 98/647 (15%) Query: 85 GTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPY 144 + + E + + F + D ++ F R+ Sbjct: 119 IKYTHENDQTEEIGEKAPKKRKSSAHD---HFMNKDDDIELFRETEEEIYGYRPHTRLQV 175 Query: 145 SGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLL-SGAAE 201 Q L P+QL + + + +LADE+GLGKT ++ +L Sbjct: 176 QPACIQNGVLKPYQLEGLNWLINLYEGGLNGILADEMGLGKTFQSISLLAYLREYRDIKG 235 Query: 202 RVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAE-----------AQHDAYNPFDTE 249 L++ P++ W+ E+ R ++ F Q D N T Sbjct: 236 LHLVLSPKSTLGNWMNEIARFCPSIKAVKFLGNGQERSDLIDNELKNIDQRDLEN--GTC 293 Query: 250 QLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGV 309 +++ S + + + + +++DEAH + ++A S+ Q + QL + Sbjct: 294 DVIVTSYEMLLKERTW---FLRRNFHSVIIDEAHRI---KNANSKLSQTVRQL--NTRFR 345 Query: 310 LLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDE 369 LLLT TP Q + ++ L L P F +F + + +E Sbjct: 346 LLLTGTPLQNSLRELWSLLNFLYPEIFSSSEEFEALFEAQ----------------TGEE 389 Query: 370 LNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGV---- 425 + +L+ S+ E ++E + + + R L+++ + Sbjct: 390 EQSIIARFHRILRPFMLRRVKSEVEIDIPPKKE-ILLYVPLTNMQRRLYKDLLSKNVDAL 448 Query: 426 ---KGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNA 482 +G K L + + L G + + Sbjct: 449 QEKEGGGKLRLINLAMQLRKACNHPYLFDGYED-------------------KSVDPFGE 489 Query: 483 TWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI 540 ++ + + ++L+ A LE R G S Sbjct: 490 HVVENSGKMVLMDRLIKKLVSGGSRILIFSQMARVLDILEDYCHMR-GFPYCRIDGNTSG 548 Query: 541 IERDRAAAWFAEEDTGA-QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDR 599 +RDR + F + ++ LL + G G N A ++++D +NP Q + R R Sbjct: 549 DDRDRQISEFNKPNSEKLVFLLSTRAGGLGINLATADIVILYDSDWNPQADLQAMDRAHR 608 Query: 600 IGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGR------------------- 640 IGQ + + E T + ++ + L GR Sbjct: 609 IGQKKPVFVFRLCHEHTIEEKIIERANLKLQLDFAIIQQGRLKGQSSAQSSGLENSALSK 668 Query: 641 ----TIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQ 683 T+ N+++ E + +I ++ E+L+ ++++ Sbjct: 669 NELMTMIQYGANEILKTTNVNITEEDIEAIISGGEKKTESLQMKIQK 715 >UniRef50_B6H510 Pc13g11770 protein n=2 Tax=Eurotiomycetidae RepID=B6H510_PENCW Length = 834 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 100/655 (15%), Positives = 194/655 (29%), Gaps = 94/655 (14%) Query: 107 VFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV- 165 + + D + ++ + Q SG + +QL + Sbjct: 178 EDNPSVQQALEQAADDYEANPTALGEQELVATQQPTLVSG-----GKMRTYQLEGLEWLK 232 Query: 166 -GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN 224 + +LADE+GLGKT++A ++ + LI P + W+ E R Sbjct: 233 TLWMNGLCGILADEMGLGKTVQAISMIAFLKEKQVSGPFLIAAPLSTVSNWVDEFARWTP 292 Query: 225 -LRFALFDDERYAEAQHDAYNPFDT------EQLVICSLDFARRSKQRLEHLCEAEWDLL 277 ++ L+ + A + +V S + + + L + +W + Sbjct: 293 GIKTVLYHGSKDERAAMRSKFMKLKNQGDMDFPVVCTSYEICMNDR---KFLAQYQWRYI 349 Query: 278 VVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFH 337 VVDE H L ++ + + + L + LL+T TP Q + ++ L L P F+ Sbjct: 350 VVDEGHRL---KNMNCKLIKEL--LTYNSANRLLITGTPLQNNISELWSLLHFLLPEVFN 404 Query: 338 DFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQ 397 D F + + L + N +M LL+ +D E Sbjct: 405 DLNSFESWFDFSSVLDNKGQADLVEKRKRNLVTSM-----HAILKPFLLRRLKTDVEHTL 459 Query: 398 SARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQT----------- 446 ++E + + L+R NG +L + T Sbjct: 460 PKKREYIL-YAPLTPEQKDLYREIINGTGRQYLEGKALERLESKSGSSTRSQSMKRKRSG 518 Query: 447 --------------------------------AIKVSGIMGARKSAEDRARDMLYPERIY 474 A K G + P Y Sbjct: 519 SDDATPVKSSRSSGTSTPARNGGTSSRRRRRSAQKEIGHKKMQNPVLQARLACNSPHNFY 578 Query: 475 ----QEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREG 528 E + + + ++ L + + K+L+ +E+ Sbjct: 579 WPWMDESSSVDESLVSASGKMLLLDRLVACLLKKGHKILIFSQFKTQLDIIEEWATTLRS 638 Query: 529 IRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPD 588 ++ ER F + + LL + G +G N A +++FD +NP Sbjct: 639 WDCCRIDGAIAQSERQAQIKNFNTKKSHKLFLLSTRAGGQGINLTAADTVIIFDSDWNPQ 698 Query: 589 LLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGR-------T 641 Q R RIGQ + I+ + T + L+ G+ + Sbjct: 699 QDLQAQDRAHRIGQTKPVIIYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFRSLLDPS 758 Query: 642 IYDSVYNDLINYLASPDQTE----------GFDDLIKNCREQHEALKAQLEQGRD 686 ++L L + ++ + ++ E + E+G D Sbjct: 759 ANSQDIDELRKALGENEFERFEAGADPASILSNEDLDILTDRSEEAYLRAEKGLD 813 >UniRef50_A2FSS0 SNF2 family N-terminal domain containing protein n=2 Tax=Trichomonas vaginalis RepID=A2FSS0_TRIVA Length = 1107 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 112/655 (17%), Positives = 213/655 (32%), Gaps = 59/655 (9%) Query: 141 RMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLL-S 197 + + + L +QL + + +LADE+GLGKTI++ +L + Sbjct: 378 QENVTQPQHLNGQLKDYQLKGLQWLVSLYLSHLNGILADEMGLGKTIQSIALLAWLMENR 437 Query: 198 GAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQL--VIC 254 LI P T W E + + Q + V+ Sbjct: 438 KDYGPHLICGPLTTLSNWYSEFNKWLPAFNVVQYTGTPAERKQKANSYLVRGSNVNVVLT 497 Query: 255 SLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTA 314 S +FA R K L ++ L++DEAH L ++ + QA+ A LLLT Sbjct: 498 SYEFATRDKA---TLGRLDYSYLIIDEAHRL---KNDQGKLGQALS--AYKCGNRLLLTG 549 Query: 315 TPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLG 374 TP Q ++ L + PN F+D +QF E A L + ++ Sbjct: 550 TPLQNNPRELWSLLNFVLPNIFNDHSQFEEWFSAPFSKAGGDVSLTGEEQF------LVI 603 Query: 375 EMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELH 434 + L + + + + +L +V++ Sbjct: 604 SQLHNVLRPFLFRRTTAQV-ATELPKMRECKLLCAMSAWQKVVYNT-------------- 648 Query: 435 TIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWL 494 L T+ + I + + +P Y + + + E L Sbjct: 649 -----LVTESSVVHSMDHIQRLDNTTMQLRKCCNHPYLFYDTWFVNL-DLVRTSGKCEVL 702 Query: 495 MGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAE 552 L + ++L+ L+ +L R+ + +R + A F + Sbjct: 703 DRILPKLKATGHRILIFSQMTEVLTLLQDLLTWRD-YKYLRLDGNTKSDQRQQLIADFNK 761 Query: 553 EDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVP 611 ED+ LL + G G N Q A ++++D +NP +Q R+ RIGQ + + Sbjct: 762 EDSEYFIFLLSTRAGGLGLNLQTADTVILYDNDWNPFADQQARSRVHRIGQEKPVLVISL 821 Query: 612 YLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASP-DQTEGFDDLIKNC 670 + + +V + GR S ++ DQ+ D+ + Sbjct: 822 VTAGSIEERVVERADDKKTVENKIIEIGRFDDSSNLDERKRLYQRLVDQSTTEDNSGAHS 881 Query: 671 REQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGI-- 728 EQ + A+ + + ++ + Q Q +LI F L D + + Sbjct: 882 SEQINRMIARSPEEYEIFQKMDVERNQALQKQWIDAGRQGKYPSLITF-EELPDFLKVPF 940 Query: 729 ----------NQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALARED 773 + + + ++M ++ + + G T E R + Sbjct: 941 SVLKKDESLPSIRKSRSSTFSIAKLENMTDSEYTRMIDRGEDPTDHIEEIEVRNE 995 >UniRef50_Q6CL05 KLLA0F06710p n=3 Tax=Saccharomycetaceae RepID=Q6CL05_KLULA Length = 1096 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 86/510 (16%), Positives = 171/510 (33%), Gaps = 57/510 (11%) Query: 146 GLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQ-LLSGAAER 202 L P+Q+ + + ++ +LADE+GLGKT++ L + Sbjct: 133 SPAYVNGQLRPYQIQGLNWLVALHKNQLAGILADEMGLGKTLQTIAFLGYLRYIEKKNGP 192 Query: 203 VLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFD-TEQLVICSLDFAR 260 L+I P++ + WL E+ R + + ++ ++ + + S + Sbjct: 193 FLVIAPKSTLNNWLREINRWTPEVSAFILQGDKEERSKLCHDKLLACDFDICVASYEIII 252 Query: 261 RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG 320 R K + +W+ +V+DEAH + ++ S Q + + + LL+T TP Q Sbjct: 253 REKA---SFKKIDWEYVVIDEAHRI---KNEESMLSQVLREFS--SRNRLLITGTPLQNN 304 Query: 321 MESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQ 380 + +A L L P+ F D A F E + ++ + + + Sbjct: 305 LHELWALLNFLLPDIFADSATFDEWFSSESSE---------------EDKEKVVKQLHTV 349 Query: 381 DIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGV---------KGFPKR 431 LL+ +D E + ++EL ++ + + ++ + K Sbjct: 350 LSPFLLRRIKNDVEGSLLPKKEL-NVYVGMSSMQKKWYKQILEKDIDAVNGSNGQKESKT 408 Query: 432 ELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRV 491 L I + L G D + + Sbjct: 409 RLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSAKLKVLDKLLKKFK-------- 460 Query: 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA 551 + +VL+ + LE RE + +R A + Sbjct: 461 ---------EQGSRVLIFSQMSRVLDILEDYCYFRE-YEYCRIDGSTAHEDRINAIDDYN 510 Query: 552 EEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610 D+ LL + G G N A +V++D +NP Q + R RIGQ +++ Sbjct: 511 APDSKKFIFLLTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVRVFR 570 Query: 611 PYLEKTAQSVLVRWYHEGLDAFEHTCPTGR 640 + + + ++ + L + GR Sbjct: 571 FVTDNSVEEKILERATQKLKLDQLVIQQGR 600 >UniRef50_UPI00006CC469 SNF2 family N-terminal domain containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CC469 Length = 1254 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 103/662 (15%), Positives = 213/662 (32%), Gaps = 77/662 (11%) Query: 140 FRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLL- 196 L+G + L +Q+ + + + +LAD++GLGKTI++ ++ Sbjct: 121 LTSQPKILKGGK--LKDYQMIGLNWMISLYETGLNGILADDMGLGKTIQSISLIGFLKEF 178 Query: 197 SGAAERVLIIVPETLQHQWLVEMLRRFN--LRFALFDDERYAEAQHDAYNPFDTEQLVIC 254 LII P++ W E + L + E Y + + Sbjct: 179 KKINGPHLIIAPKSTLGNWFNEFQKWLPCCRTIKLIATKDEREEILQNYIANSKFDVCLT 238 Query: 255 SLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE-------------- 300 S + A+ ++ L + + +++DEAH + ++ S+ + Sbjct: 239 SFEGAKLCQKY---LKKINFQYIIIDEAHKI---KNEESQTALILRSIFHSFIISNFDIN 292 Query: 301 ----QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAV 356 Q+ +LLT TP Q + ++ L L P+ F F E Sbjct: 293 YSYIQIVFKTNYKILLTGTPLQNNLHELWSLLNFLLPDLFSSSEIFDEWFSANNLSGK-- 350 Query: 357 AMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRV 416 N+ ++ + + + +++ S+ ++E + + + + Sbjct: 351 ----NNNEENDTKNIEMISQLHRILKPFMMRRTKSEVMQTLPPKKE-IHLYVGLTESQLN 405 Query: 417 LFRNTRNGVKGF-----PKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE 471 ++RN + K K+ I + L GI Sbjct: 406 IYRNLLSPKKSITGSEDDKKFYLNILMQLRKVCNHPYLFEGIEE---------------- 449 Query: 472 RIYQEFEGDNATWWNFDPRVEWLMGYLTSHRS--QKVLVICAKAATALQLEQVLREREGI 529 + ++ L L ++ +VL+ LE R+ Sbjct: 450 ---EGLPPLGEHIITNCGKMMVLDKLLQKLKNGKHQVLIFSQMTMV---LEDYCNYRQ-F 502 Query: 530 RAAVFHEGMSIIERDRAAAWFAEEDT-GAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPD 588 + + +RD + F +ED+ LL + G G N A +V++D +NP Sbjct: 503 KYCRIDGNTDMTDRDNQISDFVKEDSTKYIFLLSTRAGGLGINLATADTVVLYDSDWNPQ 562 Query: 589 LLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDS--V 646 + Q + R RIGQ + + ++ E T + ++ L + GR + + Sbjct: 563 MDLQAMDRAHRIGQKNIVNVYRLISENTIEEKIIERQTIKLKWDQLIIQQGRLAQKNRVL 622 Query: 647 YNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEI----HSNGGEKAQAL 702 D I + + F K E Q D LL+ + + Sbjct: 623 SRDEIKDMIQFGASAIFKS--KGGTYTDEGKNYSQSQNIDILLQRGEQKTKDHNKTIDEK 680 Query: 703 AESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITIT 762 + EQ + +L + + F + D ++ L + + T+ Sbjct: 681 FKKSNEQVGELSLSSINIYDFLQKNHDNDKTKEDKEALDEQLARELASELRSRREKKTMN 740 Query: 763 FD 764 ++ Sbjct: 741 YN 742 >UniRef50_A8X9E2 C. briggsae CBR-LET-418 protein n=2 Tax=Caenorhabditis briggsae RepID=A8X9E2_CAEBR Length = 1863 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 90/559 (16%), Positives = 177/559 (31%), Gaps = 69/559 (12%) Query: 138 EQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQL 195 +++ + + +L P+QL + + + +LADE+GLGKT+++ L+ + Sbjct: 588 KKYDVQPDYVSETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLM 647 Query: 196 LSGAA-ERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFD------ 247 G LI P + W E + + + +R + + Sbjct: 648 KEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGDRDSRVVLREHEFSFVDGAVR 707 Query: 248 --------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPS 293 +++ S + K L EW LVVDEAH L ++ S Sbjct: 708 TGPKAGRMKTTDNLKFHVLLTSYETINMDKTI---LSSIEWGALVVDEAHRL---KNNQS 761 Query: 294 REYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY--RP 351 ++ + + H +LLT TP Q +E F L L RF+ F E Sbjct: 762 LFFKNLNEYTIH--YRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFSEISKED 819 Query: 352 VADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRH 411 + + LL + L + ++L M + ++ ++ + + ++ L Sbjct: 820 QIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSQMQKKWYKNILTRNFDAL---- 875 Query: 412 GTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPE 471 N G + L + + L ++ + Sbjct: 876 -----------NVKNGGTQMSLMNVLMELKKCCNHPYLFVKASLEAPKEKNGMYE----- 919 Query: 472 RIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGI 529 + L L + +VL+ LE + EG Sbjct: 920 ---------GTALIKNSGKFVLLQKMLRKLKDTGHRVLIFSQMTMMMDILEDF-CDVEGY 969 Query: 530 RAAVFHEGMSIIERDRAAAWFAEED-TGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPD 588 + ++ R A + LL + G G N A ++++D +NP Sbjct: 970 KYERIDGSITGQMRQDAIDRYNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPH 1029 Query: 589 LLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC--PTGRTIYDSV 646 Q R R+GQ H + I+ + + + + + + G S+ Sbjct: 1030 NDIQAFSRAHRLGQKHKVMIYRFVTKNSVEERITTVAKKKMLLNHLVVRAGLGGKEGKSM 1089 Query: 647 YNDLINYLASPDQTEGFDD 665 ++ + E F + Sbjct: 1090 SKTELDDVLRWGTEELFKE 1108 >UniRef50_P32657 Chromo domain-containing protein 1 n=12 Tax=Saccharomycetaceae RepID=CHD1_YEAST Length = 1468 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 104/650 (16%), Positives = 206/650 (31%), Gaps = 64/650 (9%) Query: 130 YRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAP--RVLLADEVGLGKTIEA 187 Y +++ E+ + ++G L QL + + + +LADE+GLGKT++ Sbjct: 354 YTSQRPRFEKLSVQPPFIKGG--ELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQT 411 Query: 188 GMILHQQ-LLSGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNP 245 + +I+VP + WL + +L + + + Y Sbjct: 412 VAFISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEF 471 Query: 246 FD----------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 + +++ + ++ + + L +W + VDEAH L ++A S Sbjct: 472 YTNPRAKGKKTMKFNVLLTTYEYILKDRAE---LGSIKWQFMAVDEAHRL---KNAESSL 525 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 Y+++ V +L+T TP Q ++ A + L P RF Sbjct: 526 YESLNSF--KVANRMLITGTPLQNNIKELAALVNFLMPGRFT------------------ 565 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR 415 + ++E + + +L+ D E + ++ E + ++ Sbjct: 566 -IDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILR-VELSDVQT 623 Query: 416 VLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQ 475 ++N L K S +AE+R ++ + Sbjct: 624 EYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTR 683 Query: 476 EFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAV 533 E ++ L LT + +VL+ L L + GI Sbjct: 684 E--NVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIK-GINFQR 740 Query: 534 FHEGMSIIERDRAAAWFAEEDT-GAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQ 592 + +R + F D+ LL + G G N A +V+FD +NP Q Sbjct: 741 LDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQ 800 Query: 593 RIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYND--- 649 + R RIGQ + + ++ + T + ++ + + G T + Sbjct: 801 AMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKYTKKNEP 860 Query: 650 ---LINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDR-----LLEIHSNGGEKAQA 701 ++ + F + + L L D L E H G E + Sbjct: 861 NAGELSAILKFGAGNMFTATDNQKKLEDLNLDDVLNHAEDHVTTPDLGESHLGGEEFLKQ 920 Query: 702 LAESIEEQDDDTNLIAFA-MNLFDIIGINQDDRGDNMIVLTPSDHMLVPD 750 + + D + + + R D V + M D Sbjct: 921 F--EVTDYKADIDWDDIIPEEELKKLQDEEQKRKDEEYVKEQLEMMNRRD 968 >UniRef50_C6CWR3 SNF2-related protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWR3_PAESJ Length = 965 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 110/669 (16%), Positives = 210/669 (31%), Gaps = 62/669 (9%) Query: 1 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTG-ENRLYARSDSPVTRVMFNPGD 59 M ++G SD + GL +V D + + E A + R + N G Sbjct: 346 MKSSVG----SDAQPMFGLDQIVQFDWKMALGNVDLSESEFMRLAEEN----RRLMNIGG 397 Query: 60 TITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQ 119 D +V + + +G R V + + + + Sbjct: 398 EWVHLDPQ-----DVAQIRDWIKRVGKRKGLSFRDVMEMHLLGGTVMEDGDDASIALRAE 452 Query: 120 IDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVG--RRHAPRVLLAD 177 ++ D ++++E + G SL P+Q + RR +LAD Sbjct: 453 VELNDHLTRWLEQLQHTAEIPLVDIPG--SFLGSLRPYQQQGVSWLLFLRRFGLGGVLAD 510 Query: 178 EVGLGKTIEAGMILHQQLLS--GAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERY 235 ++GLGKTI+ L + L+I P ++ W E+ + A Sbjct: 511 DMGLGKTIQFMAYLSYVKEHSSNSLGPSLLICPTSVIGNWEKELEKFAPTLAAYLHYGPK 570 Query: 236 AEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 E +VI S A+ + E L + EWD L +DEA ++ ++ +++ Sbjct: 571 REKGEALQEAVAGADIVITSYSLAQIDE---EELSQIEWDALCLDEAQNI---KNVYTKQ 624 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 AI L + + LT TP + + ++ ++P +F + Sbjct: 625 SAAIRALPAN--HRIALTGTPMENRLTELWSIYDFINPGYLGSMGEFRKAIVLPIE---- 678 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD-SEDAQSARQELVSMLMDRHGTS 414 + + +L+ D + + + Sbjct: 679 -----------RTRDEQVISGLQRWVKPFMLRRVKKDPAIQLSLPEKNEAKTYLTLTTEQ 727 Query: 415 RVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIY 474 ++ N L + + S + +P + Sbjct: 728 GAIYENIVA---------------DLLEKLDKLGPMQRRGLILASLTRLKQLCDHPAMLN 772 Query: 475 QEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAA 532 +E E + +V L+ + ++ L+ QL+++L ER G+ Sbjct: 773 EERELQQQWDESRSNKVARLLEMVEEIASEGERCLIFTQFVDMGEQLKKLLEERLGLPVP 832 Query: 533 VFHEGMSIIERDRAAAWFAEEDTGA-QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLE 591 H G+ +RD F + +L + G G N A+H+ FD +NP + Sbjct: 833 YLHGGVPKAKRDDMIDKFQNPEEPCCAFVLSLKAGGTGLNLTAANHVFHFDRWWNPAVEN 892 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI 651 Q R RIGQ +Q+H T + + E + D + Sbjct: 893 QATDRAFRIGQTKQVQVHKFITLGTLEEKIDEMIDRKQQLNEQVVGQSEQWITELSTDEL 952 Query: 652 NYLASPDQT 660 L + + Sbjct: 953 KELFALRKN 961 >UniRef50_Q4N784 DNA-dependent ATPase, putative n=4 Tax=Piroplasmida RepID=Q4N784_THEPA Length = 1253 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 96/582 (16%), Positives = 187/582 (32%), Gaps = 72/582 (12%) Query: 142 MPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLS-G 198 L GQ P+Q+ + + +LADE+GLGKT + L + Sbjct: 166 DQPKILVGQS---KPYQIEGLKWLVGLYVKGLNGILADEMGLGKTFQTISFLAYLKETFS 222 Query: 199 AAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYN-PFDTEQLVICSL 256 +++ P++ W+ E+ R LR F + AQ AY + + + S Sbjct: 223 VHGPHMVLAPKSTIGNWISEIHRFCPSLRVLKFIGNKEERAQLIAYELDPEKYDIFVTSY 282 Query: 257 DFARRSKQRLE-----------------------HLCEAEWDLLVVDEAHHLVWSEDAPS 293 + ++K L L + +W L++DEAH + ++ S Sbjct: 283 ETCCKAKGPLGNFSHYFYLYNSHYNCLTLQYGLIFLGKLDWKYLIIDEAHRI---KNEES 339 Query: 294 REYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVA 353 + + + LL+T TP Q ++ +A L L P F +F Sbjct: 340 KLSEVVRLF--KTEYRLLITGTPLQNNLKELWALLNFLFPVVFSSSEEFETVF------- 390 Query: 354 DAVAMLLAGNKLSNDELN----MLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMD 409 L+ +L+ +E + + +L+ + D + EL+ ++ Sbjct: 391 ----DLVGPKELTPEERESRNLQIVARLHGILRPFMLRRSKKDVLSDMPPKNELLL-MVP 445 Query: 410 RHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY 469 + L+R+ + T A+++ E Sbjct: 446 LSAMQKQLYRDLLRKNVPELGTDDSTKSGIHVQLLNLAMQLRKACNHPYLFEGYEDRNED 505 Query: 470 PERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQVLRERE 527 P ++ + + ++L+ A LE R R Sbjct: 506 PF---------GEHVVQNSGKLCLVDKLIPRLLGNSSRILIFSQMARMLDILEDYCRMR- 555 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGA-QVLLCSEIGSEGRNFQFASHMVMFDLPFN 586 S +RD + F ++ LL + G G N A ++++D +N Sbjct: 556 NYLYFRIDGNTSGEDRDYQISSFNHPESKVNIFLLSTRAGGLGINLATADVVILYDSDWN 615 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSV 646 P + Q I R RIGQ + ++ + T + ++ L GR + Sbjct: 616 PQVDLQAIDRAHRIGQLKPVYVYRLVHQYTIEEKIIERATLKLQLDTAVIQHGRLAQKEL 675 Query: 647 YN-------DLINYLASPDQTEGFDDLIKNCREQHEALKAQL 681 + E D ++ +E+ + + +L Sbjct: 676 LQMVQYGAGHIFKAGVEAITDEDLDVILSKGQERADLMNQKL 717 >UniRef50_Q8SUC5 Similarity to THE ATPase COMPONENT OF THE TWO-SUBUNIT CHROMATIN REMODELING FACTOR n=1 Tax=Encephalitozoon cuniculi RepID=Q8SUC5_ENCCU Length = 823 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 105/586 (17%), Positives = 195/586 (33%), Gaps = 63/586 (10%) Query: 114 RLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRT---SLIPHQLNIAHDVGRRHA 170 R F G + F Y E+ PY+ + R L +Q+ + + H Sbjct: 10 RNFIGDNEFFRAFIPNYGEVVEGDEEPVEPYTFISSPRFVLYELRDYQIEGLNWLINMHE 69 Query: 171 P--RVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRR-FNLR 226 +LADE+GLGKT++ L +R LII+P++ W E + N + Sbjct: 70 NSINCILADEMGLGKTLQTIAFLGYIRYVKKERKRHLIILPKSTLANWRREFRKFMPNYK 129 Query: 227 FALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLV 286 +F R + + + + L +W +V+DEAH + Sbjct: 130 VRVFYSSRKEMRREAEEIMSSRWDACLTTYEMCIN---ARSILNTVKWSYIVIDEAHRI- 185 Query: 287 WSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ 346 ++ S + + + LL+T TP Q + +A L + P F+D +F Sbjct: 186 --KNEHSLLSKIVRIFS--CDHRLLITGTPLQNNVHELWALLNFIVPEIFNDAEKFESYV 241 Query: 347 KNYRP----VADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQE 402 N + +L L +++++ + ++ + ++E Sbjct: 242 MNIDEGDGEAIRRIRSVLQLFFLRREKIDVEMSLPPKKIVNLY--------SKLSPMQRE 293 Query: 403 LVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAED 462 ML+ R + R+ PK L + + L + Sbjct: 294 WYRMLLKRDLSPLGSTRD--------PKGMLMNVVMQLRKCCNHPYLFPDAEPKPYT--- 342 Query: 463 RARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLE 520 ++ ++ L L S + +VL+ + LE Sbjct: 343 -----------------NDKHIIENSGKMIVLDKLLASLKAKGSRVLIFSQMSMMLDILE 385 Query: 521 QVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMV 579 RE S +R A F E + LL + G G N A ++ Sbjct: 386 DYAMFRE-YEYCRIDGSTSYRDRTEAIDGFNAEGSEKFLFLLTTRAGGLGINLSTADTVI 444 Query: 580 MFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPT- 638 +FD +NP + Q R RIGQ + + E T + +V + L + Sbjct: 445 LFDSDWNPQMDLQAQDRAHRIGQKKQVVVFRLISENTVEERIVYRSLQKLKLDDILLQGR 504 Query: 639 ---GRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQL 681 ++ S D++ + EG D+ I++ + E ++ Sbjct: 505 YHRSSSVSQSELIDILANGMEITEDEGKDESIEDVIRRGEEKTREM 550 >UniRef50_Q6CDI0 YALI0C00363p n=2 Tax=Saccharomycetales RepID=Q6CDI0_YARLI Length = 1320 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 106/724 (14%), Positives = 224/724 (30%), Gaps = 65/724 (8%) Query: 73 EVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKP---QDRLFAGQIDRMDRFALR 129 V L Y+ S + +K+ + QDRL + + A+ Sbjct: 218 AVDNGATQLQYLVKWKRLNYSDATWEDAEEIAKIAEDEVERFQDRLNSKI--NPSQSAVY 275 Query: 130 YRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEA 187 + E+ ++G L QL + + + +LADE+GLGKT++ Sbjct: 276 PANSRPPFEKLTEQPGFIKGG--ELRDFQLTGINWMAFLWSRNENGILADEMGLGKTVQT 333 Query: 188 GMILHQQ-LLSGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNP 245 L L++VP + W + + + + + Sbjct: 334 VAFLSWLVYARKQHGPHLVVVPLSTVPAWQETFEFWAPGINYLAYLGNTESRKALRDHEF 393 Query: 246 FDT-------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA 298 ++ +++ + ++ + + L +W L VDEAH L ++A S Y++ Sbjct: 394 YNKTGNKKPKFNVLLTTYEYILKDRAE---LGSIKWQYLAVDEAHRL---KNAESALYES 447 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAM 358 +++ V LL+T TP Q ++ A + L P + Sbjct: 448 LKEF--RVANRLLITGTPLQNNIKELAALVDFLMPGKLT-------------------ID 486 Query: 359 LLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLF 418 L + ++E + ++ +L+ D E + ++ E + ++ + + Sbjct: 487 LEINFENPDEEQEGYIRELHKRLQPFILRRLKKDVEKSLPSKTERILR-VEMSDMQQDYY 545 Query: 419 RNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 +N + + ++ L E Sbjct: 546 KNIISKNYTALNAGATGGH--QMSLLNIMTELKKASNHPYLFPTAESKFLSLAENGASRE 603 Query: 479 GDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 ++ L LT + +VL+ L L+ + G + Sbjct: 604 NVFRGMIMTSGKMVLLDKLLTQLKKDGHRVLIFSQMVRMLDILGDYLQIK-GYQFQRLDG 662 Query: 537 GMSIIERDRAAAWFAEEDT-GAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIG 595 + R A + D+ LL + G G N A +++FD +NP Q + Sbjct: 663 TVPSATRRIAIDHYNAPDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMA 722 Query: 596 RLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLA 655 R RIGQ + + ++ + T + ++ + + G T S N Sbjct: 723 RAHRIGQKNHVMVYRFVSKDTVEEQVLERARKKMILEYAIISLGITDKGSSNNK------ 776 Query: 656 SPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNL 715 +TE + + + +D+L ++ + + + + Sbjct: 777 ---KTEPSTSELSEILKFGAGNMFKANDNQDKLENMNLDDVLNHAEDHITTPDLGESHLG 833 Query: 716 IAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFD----REVALAR 771 + F++ D D++I + D E+ + D R A R Sbjct: 834 GEEFLKQFEVTDYKADVDWDDIIPANELAKIKADDLRRKDEEYVKEQMDLMNRRRAASQR 893 Query: 772 EDAQ 775 Sbjct: 894 ASTA 897 >UniRef50_C5KXS0 Chromodomain helicase-DNA-binding protein, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5KXS0_9ALVE Length = 1105 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 99/634 (15%), Positives = 202/634 (31%), Gaps = 83/634 (13%) Query: 136 SSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQ 193 S ++ P GQR L P+QL + + +LADE+GLGKTI L+ Sbjct: 247 SGRKYVAPPKFRGGQR--LFPYQLEGLNWLIECWEQGRNPILADEMGLGKTITTIAFLNY 304 Query: 194 QLL-SGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHD----------- 241 L++ P + W + ++ + DE E + + Sbjct: 305 LFTVERVKGPFLVVAPLSTLGHWKKVADQWTDMNCLYYHDEGGREGRSELRDSEFYHFAL 364 Query: 242 -------------------AYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEA 282 + + +++ S + + E+L W +V+DEA Sbjct: 365 DYDVLNGKRYPEQPDPCPLRKSTYFKFNILLTSYELIMTDE---EYLAPIPWQYVVIDEA 421 Query: 283 HHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQF 342 H L + ++ Q +E L+ +LL+ TP Q + +A L ++P +F F Sbjct: 422 HRLR---NREAKTLQVMESLS--CRYTMLLSGTPLQNNIGELWALLHFIEPVKFCSKEAF 476 Query: 343 VEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQE 402 +E + ++ L E ++ + ++ Sbjct: 477 EQEFGELKTEKQVESLHRLLRPHLLRRLKEEVADELPDLEETII------DVELTKLQKA 530 Query: 403 LVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAED 462 + +R+ T +G + L +++ L + G+ + Sbjct: 531 YYRAIFERNKT-------YLSGAQKSGGPSLINLEVQLRKCCNHPFTIDGVEERELAMCQ 583 Query: 463 RARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLE 520 ++ L L KVL+ + ++ Sbjct: 584 NKDQEFN-------------RMIMASGKMVLLDKLLPKLHAEGHKVLLFSQFLSMLDLIQ 630 Query: 521 QVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMV 579 + R G + R+ A F ++ A LL + G G N A ++ Sbjct: 631 RYALYR-GYSVERLDGSATAKAREEAIDRFNTPESSAFLFLLSTRAGGIGINLTAADVVI 689 Query: 580 MFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTG 639 +FD +NP + Q R RIGQ D++++ +T ++ + + L E G Sbjct: 690 IFDSDWNPQMDIQATARAHRIGQTKDVKVYRLVTNRTYEAQMFERASQKLGINEAVFQRG 749 Query: 640 RTIYD---------SVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQL-EQGRDRLL 689 + + + I L ++ ++ + + ++ L ++ R Sbjct: 750 AFDGEGKKKGHGASGLSKEEIEELLKKGAYYLLENNEESKQFEQSNIEDILSKKSRLVKY 809 Query: 690 EIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLF 723 S GG ++ + D + F + Sbjct: 810 TRASGGGTFSKTSFAVTGSAEIDLDDPDFWSKML 843 >UniRef50_Q04692 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 n=10 Tax=Amniota RepID=SMRCD_MOUSE Length = 1021 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 93/590 (15%), Positives = 193/590 (32%), Gaps = 55/590 (9%) Query: 106 LVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV 165 + RL D ++ + + + L Q SL P+Q + + Sbjct: 444 IQERDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWNREQPSLLNQSLSLKPYQKVGLNWL 503 Query: 166 --GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRF 223 +H +LADE+GLGKTI+A L G LI+VP + WL E+ Sbjct: 504 ALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNKGPHLIVVPASTIDNWLREVNLWC 563 Query: 224 N-LRFALFDDERYAEAQHDA--YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVD 280 L + + Q +N ++ +++ + + A S + + + D Sbjct: 564 PSLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFD 623 Query: 281 EAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFA 340 E H L ++ S YQ + + + LLLT TP Q + + L + P+ F Sbjct: 624 EGHML---KNMGSIRYQHLMTI--NARNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSST 678 Query: 341 QFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSAR 400 + + + + ++++ + + +L+ + + Sbjct: 679 SEIRRMFSSKTKPADEQSIYEKERIAHAK---------QIIKPFILRRVKEEVLKLLPPK 729 Query: 401 QELVSMLMDRHGTSRVLFRNTRNGVKGF-----PKRELHTIKLPLPTQYQTAIKVSG--- 452 ++ + L L+ N +K E+ + + L + Sbjct: 730 KDRI-ELCAMSEKQEQLYSGLFNRLKKSINNLEKNTEMCNVMMQLRKMANHPLLHRQYYT 788 Query: 453 ----IMGARKSAEDRARDMLYPERIYQEFE--------------------GDNATWWNFD 488 ++ ++ P+ I+++ E + Sbjct: 789 PEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYQHINSYQLDMDLILDS 848 Query: 489 PRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRA 546 + L L+ + +V++ LE VL + R I ER Sbjct: 849 GKFRALGCILSELKQKGDRVVLFSQFTMMLDILE-VLLKHHQHRYLRLDGKTQISERIHL 907 Query: 547 AAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 F + LL ++ G G N A+ +++ D+ NP +Q R R+GQ ++ Sbjct: 908 IDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEV 967 Query: 607 QIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS 656 + + T + +++ + L + S+ D+ L + Sbjct: 968 LVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEADEGSMPADIATLLKT 1017 >UniRef50_Q4SNF1 Chromosome 8 SCAF14543, whole genome shotgun sequence. (Fragment) n=6 Tax=Euteleostomi RepID=Q4SNF1_TETNG Length = 1989 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 101/670 (15%), Positives = 193/670 (28%), Gaps = 144/670 (21%) Query: 140 FRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLLS 197 F L +L P+QL + + A +LADE+GLGKT++ + L+ Sbjct: 651 FDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMGLGKTVQTAVFLYSLYKE 710 Query: 198 GA-AERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFD-------- 247 G L+ P + W E ++ + ++ + A Sbjct: 711 GHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEGNAIRGG 770 Query: 248 ------------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSRE 295 +++ S + + L EW LVVDEAH L ++ S+ Sbjct: 771 KKASKMKKDSTVKFHVLLTSYELITIDQAV---LGSIEWACLVVDEAHRL---KNNQSKF 824 Query: 296 YQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADA 355 ++ + + LLLT TP Q +E F L L P RF++ F+EE + Sbjct: 825 FRVLNN--YQLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEGQ- 881 Query: 356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSR 415 + + + +L+ +D + +++ ++ R+ Sbjct: 882 ------------------IKKLHDMLGPHMLRRLKADVFKLHAIQEKYYKFILTRNFE-- 921 Query: 416 VLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAED------------- 462 N G + L + + L R Sbjct: 922 -----ALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPAAATVRFKYCSCDCGLVRKRNLFN 976 Query: 463 -----RARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAAT 515 + + + ++ L + + +VLV Sbjct: 977 ALTLFALLLCIQEAPKLPNGMYEGNSLVKSSGKLMLLQKMMRKLKEGGHRVLVFSQMTKM 1036 Query: 516 ALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA------------------------ 551 LE L E EG + G++ R A F Sbjct: 1037 LDLLEDFL-ENEGYKYERIDGGVTGNMRQEAIDRFNGEFKAVVCLDFKTQLQRSNNVLTF 1095 Query: 552 --------EEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLL------------ 590 LL + G G N A ++++D +NP Sbjct: 1096 CLLSSSFTAPGAPQFAFLLSTRAGGLGINLASADTVIIYDSDWNPHNDIQVCSATARICV 1155 Query: 591 -----------------EQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFE 633 Q R RIGQ + I+ + + + + + + + Sbjct: 1156 FVSDRIKEDNAVCFVGALQAFSRAHRIGQNRKVMIYRFVTKASVEERITQVAKKKMMLTH 1215 Query: 634 HTC-PTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCR--EQHEALKAQLEQGRDRLLE 690 P + S+ ++ + E F D + + E ++ + DRLL+ Sbjct: 1216 LVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEVGDGDNKEDDSSVIHYDDHAIDRLLD 1275 Query: 691 IHSNGGEKAQ 700 + + + + Sbjct: 1276 RNQDATDDTE 1285 >UniRef50_B2AYT1 Predicted CDS Pa_1_12130 n=6 Tax=Sordariomycetes RepID=B2AYT1_PODAN Length = 1700 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 116/697 (16%), Positives = 229/697 (32%), Gaps = 40/697 (5%) Query: 67 WQMQVEEVKEENGLLTYIGTRLDTE-ESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDR 125 ++ V+E + Y+ + + E + + Q + + + DR Sbjct: 375 KVERIVHVREGDEETEYLVKWKGLQYDDCTWEVESLVSEQAQDKIDQYTARSQRSWQSDR 434 Query: 126 FALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGK 183 R + P Q L QL + + V+LADE+GLGK Sbjct: 435 KETNLETRSRMEKLEEQPDYI---QGGQLREFQLKGLNFLALNWTRGNNVILADEMGLGK 491 Query: 184 TIEAGMILHQQL-LSGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHD 241 T++ L G L++ P ++ W ++ + ++ A + Sbjct: 492 TVQTVSFLSWLRNERGQEGPFLVVAPLSVIPAWCDTFNHWSPDINYVVYLGPEAARSNIR 551 Query: 242 AYNPF-------DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSR 294 Y F +++ S D+ +HL +W +L VDEAH L ++ S+ Sbjct: 552 EYELFVDGNPKKPKFNVLVTSYDYILADA---DHLKGIKWQVLAVDEAHRL---KNRESQ 605 Query: 295 EYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVAD 354 Y + +P +L+T TP Q + A L L+P ++E+ AD Sbjct: 606 LYVKLNGFG--IPSKVLITGTPIQNNLAELAALLDFLNPG-----KVLIDEELELLSTAD 658 Query: 355 AVAMLLAG-NKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGT 413 + + ++ + + + + +L+ E + E + ++ Sbjct: 659 SKEPVDEQLDEAKRLKTQAKLQDLHKSIAPFILRRTKETVESDLPPKTEKIIR-VELSDL 717 Query: 414 SRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERI 473 ++N + K L KVS + AE+R R Sbjct: 718 QLEYYKNILTRNYAALSDASNGHKQSLLNIMMELKKVSNHPYMFQGAEERVLANGSGRR- 776 Query: 474 YQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRA 531 E ++ L L + +VL+ L LR R G + Sbjct: 777 ----EDAVKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVKMLDILADYLRIR-GYQF 831 Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLL 590 + R A F ED+ LL + G G N A ++++D +NP Sbjct: 832 QRLDGTIPAGPRRLAINHFNAEDSDDFCFLLSTRAGGLGINLMTADTVIIYDSDWNPQAD 891 Query: 591 EQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDL 650 Q + R RIGQ + ++ ++T + +V+ L T G T + Sbjct: 892 LQAMARAHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLTIQAGVTDEGKALREQ 951 Query: 651 INYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGG-EKAQALAESIEEQ 709 + I + + +++L ++ + E A+ ++++ Sbjct: 952 FKERGMKMDEAKTAEDISMILKMRSQNLFEQSGNQEKLEQLDIDAILENAEVTKTDVDDK 1011 Query: 710 DDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHM 746 + ++ N + DD + + P+D + Sbjct: 1012 INLSSGGIDWDNWMHFTDVKVDDLALDWDQIIPADQL 1048 >UniRef50_A9UYI8 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UYI8_MONBE Length = 817 Score = 480 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 106/629 (16%), Positives = 188/629 (29%), Gaps = 77/629 (12%) Query: 151 RTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVP 208 L P+Q+ + + +LADE+GLGKT++ L++ P Sbjct: 194 GGRLRPYQIAGVDWLKALFENGLNGILADEMGLGKTLQTISFFAHLYQHKVRGPYLVVAP 253 Query: 209 ETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAY-----NPFDTEQLVICSLDFARRS 262 + W E + ++ + AQ N + VI S + R Sbjct: 254 LSTLSNWHREFSKWAPSIPVVFYHGHPDERAQLRRQIMKQNNELKSFATVITSYEIVMRD 313 Query: 263 KQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGME 322 ++ L++L W +VVDE H L ++ R + ++ + LLLT TP Q + Sbjct: 314 RRFLQNLA---WKYIVVDEGHRL---KNLNCRLIKELK--SYQSANRLLLTGTPLQNNLS 365 Query: 323 SHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDI 382 ++ L L P+ F D F + L + + L L +++ + Sbjct: 366 ELWSLLNFLLPDIFDDLDSFQRWFDFSDMEGEDAQSALIAKEQEDQVLGKLHQILQPFVL 425 Query: 383 EPLLQAANSDSED---------AQSARQELVSMLMD------------------------ 409 L D + EL + ++D Sbjct: 426 RRLKTDVEVDIPPKKEIVLYAPLTPKQSELYTSILDSTIMESIHKSGTTDTPSSDQSSDG 485 Query: 410 ---------RHGTSRVLFRNT-------RNGVKGFPKRELHTIKLPLPTQYQTAIKVSGI 453 R S+ +R R E L Q Sbjct: 486 RSSPQLNRQRAAKSKKNYRELSETDFFNRAREAPDYLPEAKPATLSRAELAQRNSSAVVN 545 Query: 454 MGARKSAEDRARDMLYPERIYQEFEGD-----NATWWNFDPRVEWLMGYLTSHR--SQKV 506 + + + +P I + +++ L L + +KV Sbjct: 546 VSLQNRLMQLRKVCNHPYLIEYPLTATGDYRIDEALVQQGGKLKILDQLLPRIKAEGRKV 605 Query: 507 LVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG 566 L+ L+ R+ + ER+ A FA++ LL + G Sbjct: 606 LIFSQMTKMLDILQDYCWLRD-YGFVRLDGSVHYTEREEALDKFAKDSDTFIFLLSTRAG 664 Query: 567 SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYH 626 G N A +++D +NP Q R RIGQ + + I+ T ++ Sbjct: 665 GLGLNLVSADTCIIYDSDWNPQQDLQAQDRCHRIGQRNPVIIYRLITANTVDQRILERAE 724 Query: 627 EGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEAL--KAQLEQG 684 + GR + ++ A DD + + K +L Q Sbjct: 725 SKRRLEKMVMHKGR--FKGKGKEVNQLAADELLELLQDDGREVLHATDATVLSKQELNQV 782 Query: 685 RDRLLEIHSNGGEKAQALAESIEEQDDDT 713 DR S + A ++ D D Sbjct: 783 LDRSFGDASKAADDKVAEGKAFRVLDVDQ 811 >UniRef50_C6PAC6 Non-specific serine/threonine protein kinase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PAC6_CLOTS Length = 1065 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 93/548 (16%), Positives = 179/548 (32%), Gaps = 56/548 (10%) Query: 113 DRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHA 170 DRL + +++D K + + L +Q + + Sbjct: 569 DRLKIAKDEKLDSL------VKTIKNPMETEFEVPKKLNGVLRKYQEVGFKWLKTLSSYG 622 Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALF 230 +LAD++GLGKTI+ L + E ++I P TL + W E+ RF Sbjct: 623 FGGILADDMGLGKTIQTIAFLLDEKEKHK-EPAIVICPTTLIYNWESEIQ-RFAPTLKTL 680 Query: 231 DDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSED 290 + + +VI S RR +E E+ ++DEA H+ ++ Sbjct: 681 VVSGSKSERGSLIKSIEESDVVITSYPLIRRD---IESYENIEFSYCILDEAQHI---KN 734 Query: 291 APSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR 350 S+ ++++++ G LT TP + + ++ L P +FVE+ + Sbjct: 735 PKSQNAESVKRI--KAKGYFALTGTPIENSLTELWSIFDFLMPGYLLSHRKFVEKYEKPI 792 Query: 351 PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDR 410 L + + +L+ D + E S Sbjct: 793 VRYKNEEAL---------------NDLSKHIRPFILRRLKKDVLKELPNKIETTS----- 832 Query: 411 HGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP 470 F K L K + + + + + + +P Sbjct: 833 -------FAELTKEQKELYMAYLENAKTEIEEEIRNKGFERSQIKIITALTRLRQICCHP 885 Query: 471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREG 528 + ++G ++E LM + + + L+ +E L+ +E Sbjct: 886 SMFVENYKG-------TSGKMELLMELIQELKESGHRALIFSQFTTALKLIEDNLK-KEK 937 Query: 529 IRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPD 588 I ER F E D+ L+ + G G N A ++ FD +NP Sbjct: 938 ISYLYLDGDTKTKERGELVKAFNEGDSD-VFLISLKAGGTGLNLVGADTVIHFDPWWNPA 996 Query: 589 LLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYN 648 + +Q R RIGQ + +Q+ + T + +V+ + G T + Sbjct: 997 IEDQATDRAHRIGQVNTVQVIKLITQGTIEEKIVKLQERKKEMINSVINPGETFITKLSE 1056 Query: 649 DLINYLAS 656 + + L + Sbjct: 1057 EEVKELFA 1064 >UniRef50_B9LWH1 Helicase domain protein n=3 Tax=Halobacteriaceae RepID=B9LWH1_HALLT Length = 988 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 195/978 (19%), Positives = 351/978 (35%), Gaps = 101/978 (10%) Query: 55 FNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDR 114 F GD + G + NG + E + L DR Sbjct: 4 FEVGDHVKFAGGQGEITKIEDRPNGGQLLHVYTTEGELRKLP---SGLPHIERIDSIIDR 60 Query: 115 LFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVL 174 L A QID LR RA + + L R + P+Q+ A+++ + R L Sbjct: 61 LAARQIDSPIHHDLRERATRLDLAYRYDRFLSLTNNRIEIEPYQVQAAYEILNSYDHRYL 120 Query: 175 LADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDER 234 + DEVGLGKTIEAG+++ + + G AERVLI+ P L QW EM +F+ F ++D E Sbjct: 121 IGDEVGLGKTIEAGIVIEELIARGRAERVLIVAPAPLTVQWQEEMREKFDRNFVIYDRET 180 Query: 235 YA--EAQHDAYNPFDTEQLVICSLDFARRSKQR--------LEHLCEAE--WDLLVVDEA 282 H N ++ E L+I S+DFA+++ + L WD+ V DEA Sbjct: 181 VENHRQSHPNQNVWEQEDLIITSIDFAKQTNDDPESDRVSVRDALDNLNESWDVAVFDEA 240 Query: 283 HHLVWSEDA-----PSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFH 337 HHL + ++ Y E +AE+ +LL+T TP + + + + LLDP RF Sbjct: 241 HHLTARRGSDDSIERTQRYTVGEAVAENSDALLLMTGTPHKGKSDQFYFLVSLLDPYRFS 300 Query: 338 DFAQFVEEQKN---YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSE 394 +Q + + R + D + + LG + + + E Sbjct: 301 HESQINPDALDDLMIRRLKDDMHDTDGTRMFPEKNIEALGVDMSRAERKLYDDVTEYIRE 360 Query: 395 DAQSARQELVSML-MDRHGTSRVLFRNTRNGVKGFPKR------------------ELHT 435 A+QE + L + K R +L Sbjct: 361 YYNLAQQEENQAAGFTMVIYQKRLVSSIYAIQKSLENRMRAIQNDAVAEDLPDDVQQLIP 420 Query: 436 IKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWL- 494 P + R + E + A D + + L Sbjct: 421 RYSTEPETLTDTERERIEEALETVTVTLNRSQIQEELDRVKQLWQQAKSIQTDSKAQLLK 480 Query: 495 ---MGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA 551 L++ +K+L+ T L + + I + R F Sbjct: 481 QFIDRILSNDPDEKILIFTEYTDTLEYLRDRVFDDHDIAQVY--GDLDQDRRREEMEKF- 537 Query: 552 EEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVP 611 + A ++L ++ EG N QFA MV +DLP+NP ++QR+GRL R GQ ++I Sbjct: 538 --ENEANLMLATDAAQEGLNLQFAHIMVNYDLPWNPIRIDQRMGRLHRYGQERTVEIRNL 595 Query: 612 YLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINY---LASPDQTEGFDDLIK 668 + + T +S ++ E + E + V D+ +A+ + D+++ Sbjct: 596 FFKNTRESEILNLLVEKTNQIESDLGMRSDVLGRVLEDVDLDDTIMAAIAEDRPSDEVVA 655 Query: 669 NCREQHEALKAQLEQGRDRLLEIHSNG-GEKAQALAESIEEQD----DDTNLIAFAMNLF 723 + E E K LE + L + ++ + + + IE + ++ F Sbjct: 656 DIDEAIEERKNALETVENEFLIRNRFDLSDEDEEILDVIERSQHGDVSEDDIEVLVREFF 715 Query: 724 DIIGINQD-------DRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQF 776 D G + G ++ L D + G + TF R+VA+ +D +F Sbjct: 716 DEFGGDIRGVRPGPARAGGDVFQLDVPDVLCGNQVAGRYDQA---TFTRQVAMEEDDVEF 772 Query: 777 ITWEHPLIRNGLDLILSGDT--GSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNR 834 I +HPL+++ ++ L + G + + ++ G L Y + + + Sbjct: 773 IALDHPLVQSLIEFCLDSNRIGGQVAVKVAEDGEPTPGIL---FTYRLGYVSGAGEAVTE 829 Query: 835 FLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQ 894 L P + + G+ + EF + ++ + + + E + Sbjct: 830 KLVP----LYVTAEGDVRTEKPEF----VDTVPPEEVVSTPPLDRLTSMAEDLHSVAEME 881 Query: 895 IEKSARALIDAA-----------RNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNR 943 + + A R A++ E+S + R ++ + Sbjct: 882 AWEQVESFAGEAREEREREVEIKRQHAEQHFEEEISEWKD--------RLEDYQQQDEQG 933 Query: 944 QQVMESLDQAGWRLDALR 961 + + + A +L++LR Sbjct: 934 KDMSAPIGNAKRQLESLR 951 >UniRef50_C5KT21 Chromatin remodelling complex ATPase chain Iswi, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5KT21_9ALVE Length = 1003 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 98/575 (17%), Positives = 190/575 (33%), Gaps = 84/575 (14%) Query: 154 LIPHQLNIAHDVGRR--HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAER-VLIIVPET 210 + P+QL+ + + +LADE+GLGKT++ +L G +++ P+T Sbjct: 1 MRPYQLDGLTWLCQLCVAHVNGILADEMGLGKTLQTISLLTTVTSKGWVHPPHMVVGPKT 60 Query: 211 LQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFD-----TEQLVICSLDFARRSKQ 264 W E R +R L + D + +++ + D R K Sbjct: 61 TLLNWAGEFKRFCPSMRVILLHGTHDERRETIEEYLMDVPQPKSFDVLLTTFDVCRIEKA 120 Query: 265 RLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESH 324 L + W V+DEAH + ++ S Q + LLLT TP Q ++ Sbjct: 121 ---ALRKIRWGYFVMDEAHRI---KNEQSSLSQVVRSFT--TQRRLLLTGTPLQNNLQEL 172 Query: 325 FARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEP 384 +A L L P+ F + QF D + ++ S D + +L ++ Sbjct: 173 WALLNFLMPSVFTNAKQF-----------DGMLERISQEHESRDVITVLHRILR----PF 217 Query: 385 LLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFP-------KRELHTIK 437 +L+ SD ++ + + + R L+R+ K L Sbjct: 218 MLRRLKSDVAKDLPEKRSVY-VFVPATEMQRTLYRDLLMKNTVLSTESLSGHKMRLLNTL 276 Query: 438 LPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGY 497 + L G+ D W ++ + Sbjct: 277 MQLRKCCNHPYLFEGMEPGPPYF-------------------DGPHLWENSGKLRVVDKL 317 Query: 498 LTSH------RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA 551 L +VL+ ++ LR + G ++ +R F Sbjct: 318 LERLAVPGPQGKNQVLIFTQMTRMLDIMDDYLRLK-GYGYCRIDGDTAMSDRQAMIDDFT 376 Query: 552 EEDTG-AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610 D+ +L + G G N A++++++D FNP + Q I R RIGQ + ++ Sbjct: 377 RPDSDKFVFILSTRAGGLGINLNTANYVIIYDSDFNPQMDLQAIDRAHRIGQKRQVTVYR 436 Query: 611 PYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVY-----NDLINYL----------- 654 + T + +V + + G+ +++ + Sbjct: 437 LVTQDTVEEKIVERAAKKMQIDNLVIQKGKFNQARASNAPTKDEVSQIIRFGAQEVVIVD 496 Query: 655 -ASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRL 688 + Q D +++ E+ + AQ+ + L Sbjct: 497 PSQGQQEVDIDAILRTAEERTADIDAQMATLSETL 531 >UniRef50_UPI000186E785 lymphoid specific helicase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E785 Length = 806 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 102/622 (16%), Positives = 212/622 (34%), Gaps = 76/622 (12%) Query: 119 QIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLA 176 QID D F R + ++ P L + + +QL + + +LA Sbjct: 162 QIDEEDYFKETRVTRLGYTVSYKQP---LLLEGGIMKDYQLKGCEWLKILFTNGVNGILA 218 Query: 177 DEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA 236 DE+G+GKTI+ + + L++ P + W++E +RF + Sbjct: 219 DEMGMGKTIQVIAFICHMIEQDIKGPFLVVAPLSTVSNWMMEF-KRFAPKVPTLLYHGNE 277 Query: 237 EAQHDAYNPFDT---------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVW 287 E + +VI S + R L + W L++DE H + Sbjct: 278 EERKAMLPDILKTTLVMKKLIHPVVITSYNVPMRDTAV---LGKINWYYLIIDEGHRI-- 332 Query: 288 SEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQK 347 ++ S + + + + G LLLT TP Q + ++ L L P F+ F Sbjct: 333 -KNHNSLLSRILRKF--NTVGRLLLTGTPLQNNLTELWSLLNFLLPEVFNTLEVFESWF- 388 Query: 348 NYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSML 407 + + + ++ + + ++ E + LL+ D ++E++ Sbjct: 389 DIKELESNGTKFMSEKFNID-----VVSILQEILVPFLLRREKKDVNLKLPPKKEILIYC 443 Query: 408 MDRHGTSRVLFRNTR--------------NGVKGFPKRE--LHTIKLPLPTQYQTAIKVS 451 + + L++ N + KR+ L + ++Y+ ++ Sbjct: 444 P-MTPSQKKLYQGILDKSIEILIKPKENKNEITTLGKRKCFLQSPYGNKKSKYEEPVESK 502 Query: 452 GIMGARKSAEDRARDML--------------------YPERIYQEFEGDNATWWNFDPRV 491 + K+ E+R L YP + E + ++ Sbjct: 503 PTIEKGKAEEERFITNLVLQNPQMNLRKVVNHPFLIQYPLKEGTEELRIDEDLVKESGKM 562 Query: 492 EWLMGYLTSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAW 549 L L+ R KV++ LE + R+ + + ++I +R+ Sbjct: 563 LVLDALLSKLKSRGHKVIIFSFFKVVLDILEDYVLLRD-YQYSRLDGDLNIPKRNEEIQK 621 Query: 550 FAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 F + L+ G G N A ++ +D +NP + Q R RIGQ+ + I+ Sbjct: 622 FMDNPEIFVFLITMRSGGLGINLTAADTVIFYDSDWNPTINLQSQDRCHRIGQSKPVMIY 681 Query: 610 VPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKN 669 ++ T ++ + + G+ S + +N + + + + + Sbjct: 682 RLCVKGTIDEKIIERANAKRRLEKMILQKGKFTLGSKNSKKLNLMDFKELKHLLESINHD 741 Query: 670 CRE-------QHEALKAQLEQG 684 E L+A L++ Sbjct: 742 ITINANGFVLSDEELEALLDRS 763 >UniRef50_O14139 Chromodomain helicase hrp3 n=3 Tax=Schizosaccharomyces RepID=HRP3_SCHPO Length = 1388 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 96/580 (16%), Positives = 188/580 (32%), Gaps = 66/580 (11%) Query: 134 KYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMIL 191 + + S + G L QL + + +LADE+GLGKT++ L Sbjct: 357 RPKYRKLEQQPSYITGG--ELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFL 414 Query: 192 HQQLLS-GAAERVLIIVPETLQHQWLVEMLRRF-NLRFALFDDERYAEAQHDAYNPFD-- 247 S L++VP + W + ++ + + Y + Sbjct: 415 SYLAHSLRQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDG 474 Query: 248 ----TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLA 303 L++ + ++ + + L +W + +DEAH L +++ S Y+A+ Q Sbjct: 475 TQKIKFNLLLTTYEYVLKDRSV---LSNIKWQYMAIDEAHRL---KNSESSLYEALSQF- 527 Query: 304 EHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGN 363 LL+T TP Q + A + L P +F + EE P + A + Sbjct: 528 -KNSNRLLITGTPLQNNIRELAALVDFLMPGKF----EIREEINLEAPDEEQEAYI---- 578 Query: 364 KLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSML----MDRHGTSRVLFR 419 + E +L+ D E + ++ E + + + + +L R Sbjct: 579 -----------RSLQEHLQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTR 627 Query: 420 NTR---NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQE 476 N R + + L I + L G+ +S + + + + Sbjct: 628 NYRVLTQSISSGSQISLLNIVVELKKASNHPYLFDGVE---ESWMQKINSQGRRDEVLK- 683 Query: 477 FEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVF 534 ++ L L+ R +VL+ L L R G Sbjct: 684 ------GLIMNSGKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLR-GYPHQRL 736 Query: 535 HEGMSIIERDRAAAWFAEEDTG-AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQR 593 + R + F ++ LL + G G N A +++FD +NP Q Sbjct: 737 DGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQA 796 Query: 594 IGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTG------RTIYDSVY 647 + R RIGQ + + ++ + T + ++ + G + D Sbjct: 797 MARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKMILEYAIISLGVTDKQKNSKNDKFS 856 Query: 648 NDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDR 687 + ++ + + F + + L LE D Sbjct: 857 AEELSAILKFGASNMFKAENNQKKLEDMNLDEILEHAEDH 896 >UniRef50_B9PV27 Transcription regulatory protein SNF2, putative n=3 Tax=Toxoplasma gondii RepID=B9PV27_TOXGO Length = 1628 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 103/605 (17%), Positives = 191/605 (31%), Gaps = 59/605 (9%) Query: 130 YRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHA--PRVLLADEVGLGKTIEA 187 Y A + ++ S L G L+P+Q+ + + +LADE+GLGKTI+ Sbjct: 668 YYAMSHQVQEEVQQPSTLTGG--DLMPYQMAGLSWMLSLYNNDLHGILADEMGLGKTIQT 725 Query: 188 GMILHQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNP 245 +L + LII P + W E R L+ + R + Sbjct: 726 IALLAYLKEFKNNSGPHLIIAPLSTLPNWADEFRRWCPSLKVVVLKGGRLERRELQRELR 785 Query: 246 FDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEH 305 + + + D A R + L W LVVDE H + +++ S+ + + + Sbjct: 786 RGDFNVCLTTFDLAMRERHGLSF---PNWRHLVVDEGHRM---KNSKSKFHICVSEF--R 837 Query: 306 VPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGN-- 363 LLLT TP Q + ++ L L P F + F + + Sbjct: 838 ATHRLLLTGTPLQNNLAELWSLLNFLLPKIFSCASDFEKWFSQPFEGQGMPVEGGDPDGA 897 Query: 364 ---KLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR- 419 L+ +E ++ + LL+ D R+E + + + +++ Sbjct: 898 GTAFLNEEERLLIINRLHAVLRPFLLRRVKKDVLKDMPERKEYLVRIC-LSAWQQAVYKQ 956 Query: 420 ------NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERI 473 T + V KR + L + Sbjct: 957 IQEKGLRTVDQVGHVTKRGFQNTLMQLRKIANHPY------------------------L 992 Query: 474 YQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRA 531 + + N + E L L KVL+ + + + R G + Sbjct: 993 FVDEYLVNEDLVRVAGKFECLDRMLPKLLHFKHKVLIFSQMTQVLDLMAEYMHLR-GYKY 1051 Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGA-QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLL 590 A + + ER F + +L + G G N Q A +V+FD FNP Sbjct: 1052 ARLDGSVGLTERKERMEEFNNAEVDTMIFMLSTRAGGLGLNLQAADTVVLFDSDFNPHQD 1111 Query: 591 EQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDL 650 Q + R R+GQ +++ + +++ + L+ + G S Sbjct: 1112 LQAMCRAHRLGQTKQVKVFRLVTISGVEEIILEKANRKLNIDQMVIQAGMFDNKSSEELR 1171 Query: 651 INYLASPDQTEGFDDLIKNCRE--QHEALKAQLEQGRDRLLEIH--SNGGEKAQALAESI 706 L Q + A+ E+ ++ E G + + Sbjct: 1172 EEKLRLLLLLHKGTTGDTTATTPLQLNRILARTEEEQNWFDEYDCRLFGKPLEELRLQDD 1231 Query: 707 EEQDD 711 ++ + Sbjct: 1232 QDLER 1236 >UniRef50_B9LVL0 Helicase domain protein n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LVL0_HALLT Length = 969 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 172/950 (18%), Positives = 357/950 (37%), Gaps = 65/950 (6%) Query: 55 FNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDR 114 PGDTI +D +V + L D V + +V ++ + + Sbjct: 4 LAPGDTILLNDN-PAEVIKTYSVGNLDYLRAYVEDVGVKTVCIADVDIEPQREQLGALEP 62 Query: 115 LFAGQIDR------MDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRR 168 + A Q+ + F LR +A + + + L P+QL + V ++ Sbjct: 63 MTADQLHPDHDAVSAEWFDLRSQALQLQIAHEQGQLLSISNSLVRLEPYQLACVNWVMQK 122 Query: 169 HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFA 228 R L+AD+VGLGKTIEAG+IL + A+RVL +VP LQ +W+ +M R F++ Sbjct: 123 LRQRALIADDVGLGKTIEAGLILKELTARNRADRVLFVVPAHLQKKWIRDMDRFFDISPT 182 Query: 229 LFDD---ERYAEAQHDAYNPFDT-EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHH 284 D E + N +D Q ++ S+ F R+ + E L +A WD++VVDEAH Sbjct: 183 PADRQWVEGERRRLGEETNIWDQDHQQMVTSMAFLRQEE-FREELDDAFWDVVVVDEAHK 241 Query: 285 LVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVE 344 ++PS+ + +E++A++ +LLL+ATP E+ + + +DP + + Sbjct: 242 AAKRGESPSKTSKMVERVADNSDSLLLLSATPHDGKGEAFRSLIEYIDPFLVAEDQDLSK 301 Query: 345 EQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE--QDIEPLLQAANSDSEDAQSARQE 402 E + + + + +G + E + +A ++ + ++ Sbjct: 302 EAVDRVMMRRGKQTIYDDDGERIFPNRDVGTIPVEMTHEERQFYRAVTDYVKNVYNRSEQ 361 Query: 403 LVSMLM--DRHGTSRVLFRNTRNGVKGFPKRELHTI--------KLPLPTQYQTAIKVSG 452 L + + L + +R + + + Y + Sbjct: 362 LNEPAVGFAMALMQKRLVSSIGAIKATLSRRLANLVDQQSTTTNLSEEASAYLEGEDLDE 421 Query: 453 IMGARKSAEDRARDMLYPERIYQEFEGDNATWWNF------DPRVEWLMG----YLTSHR 502 + E + + +E + D + + + L Sbjct: 422 QDQQKAEEELSGLTITESDAQLEEEIETLRDLVSLAEGIPVDSKAQKVRRYIQQLLEEQP 481 Query: 503 SQKVLVICAKAATALQLEQVLRER-EGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLL 561 ++K+L+ T + ++++ V H G+ +R R F + ++L Sbjct: 482 NEKILLFTEYRDTLDYILDLVKDEPWADEILVIHGGVDKEDRTRIEDEFNHGQS--RLLF 539 Query: 562 CSEIGSEGRNFQF-ASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSV 620 ++ SEG + Q MV ++LP+NP+ LEQRIGRL R GQ ++ + E T +S Sbjct: 540 ATDAASEGIDLQHSCHIMVNYELPWNPNRLEQRIGRLHRYGQEKEVTVWNFSFEDTRESK 599 Query: 621 LVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYL--ASPDQTEGFDDLIKNCREQHEALK 678 + + +++ + + + ++ L S E + E + + Sbjct: 600 VFEMLQDKVESIRGQLGNTADVLGMLDDINVDSLIMESIRNDEPASATKEELEELIDERQ 659 Query: 679 AQLEQGRDR-LLEIHSNGGEKAQALAESIEEQDD----DTNLIAFAMNLFDIIGINQDDR 733 L + +R L++ + E + + + +++ +D + +L F +G + + Sbjct: 660 RTLAEWYERSLIDTTTFDEESRRKIQDVMDQSEDVYGSEADLREFFERGISALGGDVEKA 719 Query: 734 GDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILS 793 G+N+ + + + TF+RE A+ E ++I+ + L++ + +L Sbjct: 720 GNNLFRAELPESLRRSRD---GDPYGPFTFNREFAMDHEGIEYISPDAELVQELMQQVLD 776 Query: 794 GDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLA 853 + G+ I LL P T + + + + + +D + Sbjct: 777 SEQGTVGIKLLPFVDDPGITYNYRVRFE--------DGTGEVIREEILPVFVDAAHRDPQ 828 Query: 854 AQVEFETF--NRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEAD 911 ++ + + + L+ + I + I + +L D + Sbjct: 829 QRLGQRVIGGDSIIGSPEEGRVRPLLEHER----EIRTSADRYISQRVESLRDELQQRRR 884 Query: 912 EKLSAELSRLEALRAVNPNIRDDELTAIESNRQQ---VMESLDQAGWRLD 958 E+ EL LEA + + E + + ++ + RL Sbjct: 885 EETQQELDDLEAYAEAERERIETFIADYERKAEAGTDMDIAIRRQRDRLS 934 >UniRef50_Q2S6W0 Superfamily II DNA/RNA helicase, SNF2 family n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S6W0_HAHCH Length = 1106 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 113/673 (16%), Positives = 230/673 (34%), Gaps = 81/673 (12%) Query: 9 WIS---DTESEL-GLGTVVAVDARTVTLL-------FPSTGENRLYARSDSP---VTRVM 54 W S +++S+ V VD + LL + E L +D P + Sbjct: 493 WYSSLDESDSDWFDFDLGVEVDGERINLLPVLCNLIKDAPEEWELQTLADYPGDSDVLLQ 552 Query: 55 FNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDR 114 PG I + VE V+ G L + L+ + L ++ Sbjct: 553 VAPGRWIK------LDVERVRNLLGSLIELYDHDPLVNDKFRLKRGQVGQLLALNEAMAS 606 Query: 115 --LFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHA 170 L D++ R +R + ++ S F + +L +Q + + R Sbjct: 607 VSLRWLGADKLTRLIVRLKQQEQMSHVFPPDW-----FNATLRDYQQEGLNWLGFLREIE 661 Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLSGA-AERVLIIVPETLQHQWLVEMLRR-FNLRFA 228 +LAD++GLGKTI+ +L + G LI+ P +L W E + L+ Sbjct: 662 MGGILADDMGLGKTIQTLALLSVEKAQGRMDRPCLIVAPTSLMSNWRKEAEKFAPGLKVL 721 Query: 229 LFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 + + + + + LV+ + R E+L + ++ L++DEA + Sbjct: 722 VLHGSQ----RAERFERIADNDLVLTTYPLLPRDS---EYLLKQDYHYLILDEAQTI--- 771 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 ++ ++ Q + +L L LT TP + + ++ L P D +F + Sbjct: 772 KNPKAQATQLVHRL--EARHRLCLTGTPMENHLGELWSLFNFLTPGLLGDDRKFKTLFRT 829 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM 408 + ++ + +L+ + + E+ ++ Sbjct: 830 PIEKQGDLER---------------QRLLSRRIKPFMLRRTKQEVATELPEKTEIQRTVL 874 Query: 409 DRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDML 468 G R L+ + R + + + + AI G+ + D + Sbjct: 875 -LEGKQRDLYESIR---------------VAMDKKIRDAIAKKGVKRSHIEILDALLKLR 918 Query: 469 YPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKVLVICAKAATALQLEQVLRER 526 + D+A +++ LM L S +K+L+ + +E L ++ Sbjct: 919 QVCCDPSLLKLDSARKVKSSAKLDTLMSMLPSLLEEGRKILLFSQFTSMLGLIEAQL-DK 977 Query: 527 EGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFN 586 GI +RD F + + L+ + G G N A ++ +D +N Sbjct: 978 AGIEYVKLTGATK--DRDTPVNRFQNGE-VSLFLISLKAGGVGLNLTAADTVIHYDPWWN 1034 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSV 646 P + Q R RIGQ + ++ E T + +V + ++ + Sbjct: 1035 PAVENQATDRAYRIGQDKPVFVYKLITEGTVEEKIVELQKQKQALADNLLADKAEKFT-F 1093 Query: 647 YNDLINYLASPDQ 659 + + L +P + Sbjct: 1094 DEEELRKLFAPVE 1106 >UniRef50_D0MVY5 Chromatin-remodeling complex ATPase chain, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MVY5_PHYIN Length = 1385 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 91/565 (16%), Positives = 183/565 (32%), Gaps = 79/565 (13%) Query: 153 SLIPHQLNIAHDVGRR--HAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPE 209 ++ +QL + +LADE+GLGKT++ +L + +++VP+ Sbjct: 269 TMRAYQLEGLSWMINLAHQGINGILADEMGLGKTLQTISVLAYFYEFENISGPHIVLVPK 328 Query: 210 TLQHQWLVEMLRRFN-LRFALFDDERYAEAQ-------HDAYNPFDTEQLVICSLDFARR 261 + WL E R LR F + + + + + + + + Sbjct: 329 STLSNWLAEFKRWCPSLRAVKFHGNKEERQRCVQEVLCPGLPDDKRKFDVCVTTFEMCLK 388 Query: 262 SKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGM 321 K LC+ W L++DEAH + ++ S+ + L LLLT TP Q + Sbjct: 389 EKT---ALCKFAWRYLIIDEAHRI---KNESSQFSTVVRML--DTEHRLLLTGTPLQNNL 440 Query: 322 ESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQD 381 +A L L P+ F +F + ++ + + + Sbjct: 441 HELWALLNFLLPDVFASSQEFDDWFNLDVD--------------DDEAKKQMISQLHKIL 486 Query: 382 IEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTR--------NGVKGFPKREL 433 +L+ +D E + ++E + + + L+++ G G K L Sbjct: 487 RPFMLRRLKADVEKSLPPKKETLLF-VGMSEMQKALYKSLLLRDMNTIMGGTGGVSKSAL 545 Query: 434 HTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEW 493 I + L G + + ++ Sbjct: 546 QNIVMQLRKCCGHPYLFEGQED-------------------RTLDPLGEHVVENCGKMVL 586 Query: 494 LMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFA 551 L LT R +VL+ +E R R S +R+ + + Sbjct: 587 LDKLLTKLKQRGSRVLIFTQMTRVLDIMEDFCRMRL-YDYCRIDGQTSYEDRESSIDEYN 645 Query: 552 EEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610 + ++ LL + G G N A ++++D +NP Q R RIGQ ++ ++ Sbjct: 646 KPNSSKFLFLLSTRAGGLGINLYTADVVILYDSDWNPQADLQAQDRAHRIGQKKEVNVYR 705 Query: 611 PYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSV--------------YNDLINYLAS 656 + + ++ + L GR + + S Sbjct: 706 LVTTDSVEEKIIERAQQKLKLDAMVVQQGRLQEKQSKLTKNDMLEMIRFGADQVFRTTDS 765 Query: 657 PDQTEGFDDLIKNCREQHEALKAQL 681 E D ++ ++ E +K ++ Sbjct: 766 TITDEDIDAILARGEQRTEEMKQKM 790 >UniRef50_C6N1M4 DNA helicase n=2 Tax=Legionella RepID=C6N1M4_9GAMM Length = 1091 Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 112/648 (17%), Positives = 215/648 (33%), Gaps = 69/648 (10%) Query: 19 LGTVVAVDARTVTLLFPSTGENRLYARSD------SPVTRVMFNPGDTITSHDGWQMQVE 72 LG +V + + V+++ Y+ D + ++ + G + G Sbjct: 498 LGILV--EGKPVSIVPLVADLIHRYSGGDLDSLPDEQLVKLPLDDGRALQLAMGR----- 550 Query: 73 EVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRA 132 +K LL G R E + + + L ++ + + L A + LR Sbjct: 551 -IKPLVRLLLQFGLRHIDENQHLQINKYQL---ILMQEAELALEATKSRWQGAETLRAEL 606 Query: 133 RKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMI 190 ++ +G L +Q + + R +LAD++GLGKT++ Sbjct: 607 KRLIKATDIPEIEIPQGLHAQLRDYQRYGLNWMQFLRTSRFSGILADDMGLGKTVQTLTH 666 Query: 191 LHQQLLSGAAERV-LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTE 249 L + G + LI+ P +L W E RRF + Q + FD Sbjct: 667 LQYEKEQGRLKTATLIVAPTSLVGNWQAE-ARRFTPELKVLVYHGSERHQDN----FDDY 721 Query: 250 QLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGV 309 LV+ + R K E + L++DEA + ++A ++ Q I+QL Sbjct: 722 DLVVSTYGLIHRDK---EKFVSYPFYYLILDEAQFI---KNARTKTTQIIQQL--RAAHR 773 Query: 310 LLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDE 369 L LT TP + + ++ L P D QF + + Sbjct: 774 LCLTGTPLENHLGELWSLFHFLMPGLLGDAKQFRLWFRTPIEKYADLDR----------- 822 Query: 370 LNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFP 429 E++ ++ +L+ + + E+ + + G R L+ R ++ Sbjct: 823 ----REVLAKRVKPFILRRTKNQVASELPPKTEMTRTI-EISGPQRDLYEAIRMSMEKKV 877 Query: 430 KRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDP 489 + + L I + ++ R+ D L + Sbjct: 878 RDAIVRQGLGK----SHIIILDALLKLRQICCDPRLLSLPEATMAH----------GTSG 923 Query: 490 RVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAA 547 ++E LM L + + +VLV + +E L+ R R Sbjct: 924 KLETLMELLDNLVGEGRRVLVFSQFTSMLQLIENELQARH-YDYLKLTGQT--QNRQAMV 980 Query: 548 AWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 F E T L+ + G G N A ++ +D +NP + +Q R RIGQ + + Sbjct: 981 EKFQEGKTP-VFLISLKAGGTGLNLTRADTVIHYDPWWNPAVEDQATDRTHRIGQENPVF 1039 Query: 608 IHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLA 655 ++ T + ++ + ++ D I+ Sbjct: 1040 VYKLITAGTVEEAILGMQERKRQLVDGILSADPAKAITLSEDDIDQFF 1087 >UniRef50_A9TTS1 SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TTS1_PHYPA Length = 1445 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 104/654 (15%), Positives = 205/654 (31%), Gaps = 68/654 (10%) Query: 151 RTSLIPHQLNIAHDVGRRHAP--RVLLADEVGLGKTIEAGMILHQQ-LLSGAAERVLIIV 207 +L +QL + + V+LADE+GLGKT+++ +L L++V Sbjct: 413 GGTLRDYQLEGLNFLMNSWRNDTNVILADEMGLGKTVQSVSMLGFLQYAQQIPGPFLVVV 472 Query: 208 PETLQHQWLVEMLRR-FNLRFALFDDERYAEA--QHDAYNPFD-----TEQLVICSLDFA 259 P + W E + ++ ++ R + QH+ Y ++ + + Sbjct: 473 PLSTITNWAKEFRKWLPDMNVVVYVGNRASREVSQHEFYTGRKTGRTIKFNTLLTTYEVV 532 Query: 260 RRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 + K L + +W L+VDEAH L ++ + Y +++ + +L+T TP Q Sbjct: 533 LKDKAV---LSKIKWCYLMVDEAHRL---KNCEASLYTTLQEFS--TKNKVLVTGTPLQN 584 Query: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 +E +A L LD ++F F E KN D + +L L + + + + Sbjct: 585 SVEELWALLHFLDSDKFKSKEHFTEHYKNLSSF-DEKELANLHAELRPHLLRRIIKDVEK 643 Query: 380 QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 + + + +++ +++R+ N N + L I + Sbjct: 644 SLPPKIERILRVEMS---PLQKQYYKWILERNF-------NDLNKGVRVNQVSLLNIVVE 693 Query: 440 LPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT 499 L + ++ L L Sbjct: 694 LKKCCNHPFLFESADYGYGGDAN------------TNDNNKIQRIVLSSGKLAILDKLLV 741 Query: 500 SHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGA 557 + +VL+ L L R G + R +A F + Sbjct: 742 RLKETKHRVLIFSQMVKMLDILADYLSLR-GFQFQRLDGSTRADLRHQAMEHFNAPGSED 800 Query: 558 Q-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKT 616 LL + G G N A +++FD +NP Q + R RIGQ + I+ + ++ Sbjct: 801 FCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQRDVVNIYRFVISRS 860 Query: 617 AQSVLVRWYHEGLD-------------AFEHTCPTGRTIYDSVYNDLINYLASPDQTEGF 663 + ++ + + L A Sbjct: 861 VEEDILERAKKKMASSKLILMPEFLCVLDHLVIQKLNA-----QGRLEKKEAKKGTGFDK 915 Query: 664 DDLIKNCREQHEAL--KAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 ++L R E L + E+ + LE A+A + + + Sbjct: 916 NELAAILRFGAEELFKDDKNEEDQKSKLENMDIDEILARAEKVETKSATEVDAEGNELLG 975 Query: 722 LFDIIGINQDDRGDNMI-VLTPSDHMLVPDFPGLSEDGITIT-FDREVALARED 773 F + + + L P + + TI + ++ R D Sbjct: 976 AFKVANFSNTEDDATFWSRLIPPEAARQAEDMSGPRVARTIRNYSEDLGSERND 1029 >UniRef50_Q9H4L7 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 n=21 Tax=Eumetazoa RepID=SMRCD_HUMAN Length = 1026 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 91/590 (15%), Positives = 196/590 (33%), Gaps = 55/590 (9%) Query: 106 LVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV 165 + RL D ++ + + + + + Q SL P+Q + + Sbjct: 449 IQERDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWL 508 Query: 166 --GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRF 223 +H +LADE+GLGKTI+A L G LI+VP + WL E+ Sbjct: 509 ALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWC 568 Query: 224 N-LRFALFDDERYAEAQHDA--YNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVD 280 L+ + + Q ++ ++ +++ + + A S + + + D Sbjct: 569 PTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFD 628 Query: 281 EAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFA 340 E H L ++ S YQ + + + LLLT TP Q + + L + P+ F Sbjct: 629 EGHML---KNMGSIRYQHLMTI--NANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSST 683 Query: 341 QFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSAR 400 + + + + + ++++ + + +L+ + + Sbjct: 684 SEIRRMFSSKTKSADEQSIYEKERIAHAK---------QIIKPFILRRVKEEVLKQLPPK 734 Query: 401 QELVSMLMDRHGTSRVLFRNTRNGVKGF-----PKRELHTIKLPLPTQYQTAIKVSG--- 452 ++ + L L+ N +K E+ + + L + Sbjct: 735 KDRI-ELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNVMMQLRKMANHPLLHRQYYT 793 Query: 453 ----IMGARKSAEDRARDMLYPERIYQEFE--------------------GDNATWWNFD 488 ++ ++ P+ I+++ E + Sbjct: 794 AEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHINNFQLDMDLILDS 853 Query: 489 PRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRA 546 + L L+ + +V++ LE VL + R I ER Sbjct: 854 GKFRVLGCILSELKQKGDRVVLFSQFTMMLDILE-VLLKHHQHRYLRLDGKTQISERIHL 912 Query: 547 AAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDI 606 F + LL ++ G G N A+ +++ D+ NP +Q R R+GQ ++ Sbjct: 913 IDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEV 972 Query: 607 QIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS 656 + + T + +++ + L + S+ D+ L + Sbjct: 973 LVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIATLLKT 1022 >UniRef50_B6K5R2 Chromodomain helicase hrp1 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K5R2_SCHJY Length = 1354 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 100/617 (16%), Positives = 195/617 (31%), Gaps = 73/617 (11%) Query: 101 FLDSKLVFSKPQD--RLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQ 158 + + P+ + F Y + + + S ++G L Q Sbjct: 281 EDAATIAQLAPEKVRSFLRRETSPYLPFKGVYYNTRPAYRKLDKQPSYIKGG--ELRDFQ 338 Query: 159 LNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLLS-GAAERVLIIVPETLQHQW 215 L + + +LADE+GLGKT++ L + LI+VP + W Sbjct: 339 LTGLNWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLIHQLKQHGPFLIVVPLSTVPAW 398 Query: 216 LVEMLRR-FNLRFALFDDERYAEAQHDAYNPF-------DTEQLVICSLDFARRSKQRLE 267 + R ++ + A Y + +++ + ++ + + + Sbjct: 399 QETLARWAPDINSICYTGNSEARTTIRDYEFYVSTNARKLKFNILLTTYEYILKDR---Q 455 Query: 268 HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFAR 327 L W L VDEAH L +++ S Y+A+ Q LL+T TP Q ++ + Sbjct: 456 ELNNIRWQYLAVDEAHRL---KNSESSLYEALSQF--RTANRLLITGTPLQNNLKELASL 510 Query: 328 LRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQ 387 + L P RF+ + EQ N+E + ++ +L+ Sbjct: 511 VNFLMPGRFYIRDELNFEQ-------------------PNEEQERNIRDLQQRLHPFILR 551 Query: 388 AANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGV--------KGFPKRELHTIKLP 439 D E + ++ E + ++ L++N G L I + Sbjct: 552 RLKRDVEKSLPSKTERILR-VELSDLQTQLYKNILTRNYRALSGAAAGNAHVSLLNIVVE 610 Query: 440 LPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT 499 L G+ R+ ++ L L Sbjct: 611 LKKASNHPYLFPGVQEKWMIGRKNTRE------------DKLRGIVMNSGKMVLLDKLLQ 658 Query: 500 SHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTG- 556 + +VL+ L + + R G + R A F D+ Sbjct: 659 RLKQDGHRVLIFTQMVKVLNILAEYMNLR-GYNFQRLDGTIPAPVRRLAIDHFNSPDSPD 717 Query: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKT 616 LL + G G N A +++FD +NP Q + R RIGQ + + ++ + T Sbjct: 718 FVFLLSTRAGGLGINLSTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFLSKDT 777 Query: 617 AQSVLVRWYHEGLDAFEHTCPTG------RTIYDSVYNDLINYLASPDQTEGFDDLIKNC 670 + ++ + G + D + + +N + + F Sbjct: 778 VEEDILERARRKMILEYAIISLGVTEKSKNSKSDKITSQELNAILKFGASNMFKANDNQQ 837 Query: 671 REQHEALKAQLEQGRDR 687 + ++ L L+ D Sbjct: 838 KLENMNLDDILKHAEDH 854 >UniRef50_B6KDR5 Chromatin remodeling complex protein SNF2L, putative n=5 Tax=Eukaryota RepID=B6KDR5_TOXGO Length = 1556 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 104/661 (15%), Positives = 202/661 (30%), Gaps = 76/661 (11%) Query: 91 EESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQ 150 L E D L+ +D + D + + R S + G Sbjct: 147 GRERRMLSEAEEDDILLRRLEEDSGEGAEGDASRQGDVFVR--------ITEQPSCIEG- 197 Query: 151 RTSLIPHQLNIAHDVGRRHAP--RVLLADEVGLGKTIEAGMILHQQ-LLSGAAERVLIIV 207 + +Q+ + + + H +LADE+GLGKT++ IL L+I Sbjct: 198 --KMKHYQIEGLNWLYQLHCLDINGILADEMGLGKTLQTISILAFLQFEKNIPGPHLVIC 255 Query: 208 PETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDT---EQLVICSLDFARRSKQ 264 P + W E+ + RF E + + Y + I + + + Sbjct: 256 PRSTLDNWFNEVKKWC-PRFRPARLHGTKEERQELYESVLDPGLFDICITTYEMVIKDYH 314 Query: 265 RLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESH 324 RL +W+ L++DEAH + ++ S + + + LL+T TP Q + Sbjct: 315 RLA--SRFQWNYLIMDEAHRI---KNEKSVLSEVVRRFRPRRR--LLITGTPLQNNLREL 367 Query: 325 FARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEP 384 +A L + P F F R + + + Sbjct: 368 WALLNFIMPQLFDVTLDFAALFDFSRLNTEQQQH-------------QVITTLHRILRPF 414 Query: 385 LLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGV------KGFPKRELHTIKL 438 +L+ SD ++E+ + + L+ + + K ++ I + Sbjct: 415 MLRRLKSDVARDLPPKREIYIF-VGMSKLQKKLYADILSKNVEVLNAMSGSKTQMLNILM 473 Query: 439 PLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYL 498 L G+ E ++ L L Sbjct: 474 QLRKCCNHPYLFDGVEPGPPYVE-------------------GEHMVEAAGKMALLDKLL 514 Query: 499 TSHRSQ--KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTG 556 +++ +VL+ ++ R R G G ER F E + Sbjct: 515 PRLKAEGSRVLLFSQMTRLLDIVDDYCRWR-GFDYCRIDGGTPGTERQERIDEFNAEGSK 573 Query: 557 AQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEK 615 LL + G G N A +++FD FNP + Q + R RIGQ + ++ Sbjct: 574 KFLFLLSTRAGGLGINLATADIVILFDSDFNPQMDLQAMDRAHRIGQKKRVVVYRFVTGD 633 Query: 616 TAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHE 675 T ++ +V + L GR + S ++ + + Sbjct: 634 TVEAKIVERAAKKLKLDSLVIQKGRLSQSNQAQ----KGPSTNELHAILQFGAQEVYRTQ 689 Query: 676 ALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF-AMNLFDIIGINQDDRG 734 + E D +L ++ ++ + + + +L + G D+ Sbjct: 690 DESSITEADIDVIL---ADAEQRTAEIQAQLTSLERTFDLSNMSLDGGLHMYGEEDDEMR 746 Query: 735 D 735 + Sbjct: 747 N 747 >UniRef50_C8NVD6 DNA/RNA helicase n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NVD6_9CORY Length = 1006 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 106/667 (15%), Positives = 200/667 (29%), Gaps = 64/667 (9%) Query: 13 TESELG------LGTVVAVDARTVTLLFPS-TGENRLYARSDSPVTRVMFNPGDTITSHD 65 ESE G +VA D + E S S + R+ Sbjct: 388 AESEPGEVSRFSFDQLVAYDWKLSLGDTELTPEEMSQLVSSKSGLIRLR----------- 436 Query: 66 GWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRL----FAGQID 121 Q + + YI + + E + L + S + AG +D Sbjct: 437 -GQWVLADQASLRKSRKYIESLTEQEVEDGLITADELRQLALESAAEQEAGGLEIAGDVD 495 Query: 122 RMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEV 179 + L +Q + R+ +LAD++ Sbjct: 496 APGWLHALVGG---TDRPAPERQPIPDTVHAELRDYQRRGVDWLYFMSRNKLGAVLADDM 552 Query: 180 GLGKTIEAGMILHQQLLSGAA-ERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEA 238 GLGKT++ +L + G L++ P ++ W E R Sbjct: 553 GLGKTLQLLSLLAVEADQGRKTGPTLVVAPTSVVGNWAREAERFVPGMRVGVHHGSGRLK 612 Query: 239 QHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA 298 + + ++I S A R + L EWD +V+DEA + ++ ++ ++ Sbjct: 613 GQELVDAIGELDVLITSYGIAGRD---YKTLGLVEWDHVVLDEAQAI---KNTGTQASKS 666 Query: 299 IEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAM 358 + + + LT TP + + + L ++P A F Sbjct: 667 VRAIG--ARHRIALTGTPVENRLAELRSILDFVNPGILGSQAFFRNHFSKVIESRRD--- 721 Query: 359 LLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLF 418 L+++ L + G + L + + + +D L+ Sbjct: 722 ----EALADNMQERLQRLTGPFVLRRLKTDPAIIED---LPEKTEQVVTVDMTPEQAALY 774 Query: 419 RNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFE 478 N ++ + ++ ++ + + +P + Sbjct: 775 TALVNAMQ---------------KELESRTGMARKGLVLSTITRIKQICNHPAHYQADGS 819 Query: 479 GDNATWWNFDPRVEWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHE 536 + +V LM L Q+VLV A L+ L +R G H Sbjct: 820 PVTDKGKHRSGKVAMLMELLDQAIETDQRVLVFTQYKAFGDILQPYLSDRLGHEIPFLHG 879 Query: 537 GMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 G+S +RD F + + ++L G G N AS ++ D +NP + Q R Sbjct: 880 GLSKTQRDTMVERFQDPNGPRAMILSLRAGGTGLNLTAASMVIHMDRWWNPAVENQATDR 939 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS 656 RIGQ ++Q++ T + + L G + + + L S Sbjct: 940 AYRIGQNRNVQVYKMITRGTMEESIQDILDGKLKLAGAVVGEGEGWITELGTEELATLMS 999 Query: 657 PDQTEGF 663 Sbjct: 1000 YRTAGED 1006 >UniRef50_UPI00016929C4 SWF/SNF family helicase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016929C4 Length = 948 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 119/664 (17%), Positives = 220/664 (33%), Gaps = 69/664 (10%) Query: 14 ESELGLGTVVAVDARTVTLLFPSTG-ENRLYARSDSPVTRVMFNPGDTIT----SHDGWQ 68 ES +GL ++ D + V T E + ++ G + ++ + Sbjct: 336 ESLIGLKQLMEFDWKLVIEDLELTEGEFLRLLEEKRNLVQIR---GRWVQIDPGLYEQME 392 Query: 69 MQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFAL 128 VE +K++ GL L E + K + L Sbjct: 393 QMVERMKKQKGLTLKDVLELHLLEGEDQVPVSGEADKTKQRLLLEVEVTDH--------L 444 Query: 129 RYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIE 186 R + + S +G R +L P+Q + R+ LAD++GLGKTI+ Sbjct: 445 RQLIDRMTHAASIPGISTPKGFRGTLRPYQSEGISWMHFLRQLQLGGCLADDMGLGKTIQ 504 Query: 187 AGM-ILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFAL-FDDERYAEAQHDAYN 244 +L + G + L+I P ++ W +E+ +RF + Sbjct: 505 WISYLLKAKEDGGLSSPSLLICPTSVLGNWQMEL-KRFAPSLNVHLHYGPNRRKGVSFEQ 563 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAE 304 LV+ S + + E L WD + +DEA ++ ++A +++ +I +L Sbjct: 564 AVSATDLVLTSYTLSHLDE---EELSTVYWDSICLDEAQNI---KNAYTKQAASIRKLKG 617 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNK 364 H + LT TP + + ++ L+P +F + + + K Sbjct: 618 H--HRIALTGTPIENRLTELWSIFDFLNPGYLGTQREFTQRYVHSIERIQDTKSINQVQK 675 Query: 365 LSNDELNMLGEMIGEQDIEPLLQAANSD-SEDAQSARQELVSMLMDRHGTSRVLFRNTRN 423 L LL+ D + + V + L+ N Sbjct: 676 LIR---------------PFLLRRIKKDPAIQLDLPDKNEVKTFVTLSAEQASLYEN--- 717 Query: 424 GVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNAT 483 + + A + + + +P + +E G Sbjct: 718 ------------YIHDMLDRLNQAGGMGRRGIILAALTKLKQICNHPALVLKERPG--GP 763 Query: 484 WWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSII 541 W +++ L+ + R K L+ T L+ VL + G H G S Sbjct: 764 WEQRSGKLDRLVEMVHELRDEGDKCLIFTQFVDTGFLLQHVLEQELGHPVLFLHGGSSKA 823 Query: 542 ERDRAAAWFAE-----EDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 +RD+ A F + ++ LL + G G N A+H+ FD +NP + Q R Sbjct: 824 DRDKMIARFQDLTLPEDEQRYVFLLSLKAGGTGLNLTAANHVFHFDRWWNPAVENQATDR 883 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLAS 656 RIGQ ++Q+H T + + + L + G + D + L S Sbjct: 884 AYRIGQTRNVQVHKFITLGTLEERIDEMIEQKLGLSQQIVGQGENWITELDTDELKELLS 943 Query: 657 PDQT 660 + Sbjct: 944 LRKD 947 >UniRef50_B7P0R8 Helicase, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7P0R8_IXOSC Length = 624 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 112/599 (18%), Positives = 192/599 (32%), Gaps = 69/599 (11%) Query: 151 RTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVP 208 ++ P+Q+ + + +LADE+GLGKTI+ ++ SG L++ P Sbjct: 19 GGTMRPYQIEGLRWLKVLYENGVNGILADEMGLGKTIQVIALVAGLADSGLPGPYLVVAP 78 Query: 209 ETLQHQWLVEMLRRFN-LRFALFDDERYAEAQ---------HDAYNPFDTEQLVICSLDF 258 + WL E R L L+ + A+ + +V+ S + Sbjct: 79 LSTLTNWLAEFRRFTPSLTSLLYHGTKEQRAELVSGATRGQDPETSALRRATVVLTSYEV 138 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 A R + +L L +W LLVVDEAH L ++ R + + Q + P LLLT TP Q Sbjct: 139 AMRDRAKLAPL---DWGLLVVDEAHRL---KNFRCRLMRELAQ--YNAPNRLLLTGTPLQ 190 Query: 319 LGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIG 378 + +A L L P F+D F +++ + ++ N L + Sbjct: 191 NSLTELWALLHFLIPEIFNDLRAFESWFD-----MSSLSEGEGTRFVEQEQTNQLVGTMQ 245 Query: 379 EQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN-TRNGVKGFPKRELHTIK 437 E LL+ + E + EL+ + L++ VK ++E Sbjct: 246 EILRPFLLRRTKDEVELDLPTKTELL-VYASLSPLQEKLYKICVDGAVKAVSQQEEDLDP 304 Query: 438 LPLP-----------------------------------TQYQTAIK-VSGIMGARKSAE 461 + + + +R Sbjct: 305 SEQEGGRPRRSRRSIRYVDPGEDDPWEDDASRSPGHGQEDATREPKDPLDELRHSRNPLM 364 Query: 462 DRARDMLYPERI--YQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATAL 517 D + +P + ++ L L R KVL+ Sbjct: 365 DLRKICNHPYLFRWVDPTGPADEELVAASGKLRLLDCMLPELRRRKHKVLLFSQMTRVLD 424 Query: 518 QLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH 577 LE R R + +R F + + LL + G G N Sbjct: 425 ILEDYCHLRH-FRHCRLDGRTKVEDRQLQMHLFNNDPSYFVFLLSTRAGGLGINLTGGDT 483 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP 637 +V+FD +NP Q + R RIGQ + ++ T + +V + Sbjct: 484 VVLFDSDWNPQCDLQAMDRCHRIGQTRPVVVYRLVTRGTVEQRMVERASAKRKLEKIIMQ 543 Query: 638 TGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGG 696 G + V N L+ + E ++ R A + D LL+ G Sbjct: 544 KGARRFSRVGESSRNALSPQELLELL-RSSEHSRVVDTHSSALSAEQLDALLDRSRAPG 601 >UniRef50_A1BFU1 SNF2-related protein n=3 Tax=Chlorobium/Pelodictyon group RepID=A1BFU1_CHLPD Length = 1007 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 111/652 (17%), Positives = 209/652 (32%), Gaps = 69/652 (10%) Query: 18 GLGTVVAVDARTVTL--LFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQM-QVEEV 74 GL T+++ D F E R A P+ RV + ++ Sbjct: 414 GLDTLLSCDYAASLGNDEFDL-DELRRLAELKMPLVRVR----GQWRQIEQRELADALRF 468 Query: 75 KEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARK 134 E+ + G +E L + V + + ++ RF L + + Sbjct: 469 LEKRQSGELSVRDILAAAFGAGPKETALVHRTVDADGWMKDLLDKLKGYTRFELLSQPDR 528 Query: 135 YSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILH 192 + + L +Q+ + R LAD++GLGKTI+ +L Sbjct: 529 FEGK---------------LREYQVRGFSWLAFLRTWGLGACLADDMGLGKTIQTLALLQ 573 Query: 193 QQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLV 252 Q+ G VL+I P ++ + W E + L LV Sbjct: 574 QERNLGEKRPVLLICPTSVVNNWRKEAEQFTPDLAVLVHHGSDRLKTAAFRRAAAKSALV 633 Query: 253 ICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLL 312 I S R + L + +W +++DEA ++ ++ +++ +A L + L Sbjct: 634 ISSYGLLLRD---IASLSKQQWAGVILDEAQNI---KNPETKQAKAARTL--QSDYRIAL 685 Query: 313 TATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNM 372 T TP + + +A + L+P A F E + Sbjct: 686 TGTPVENHVGDLWALMDFLNPGFLGGQAFFKEHFYYPIQWNGDIDA-----------SER 734 Query: 373 LGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRE 432 L + + L + S+ + L L++ Sbjct: 735 LKAITAPFILRRLKTDTSIISDLPDKIEMKQYCTLTR---EQASLYKAV----------- 780 Query: 433 LHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVE 492 L + +TA + + +P + GDN++ + +++ Sbjct: 781 ----IDELQEKIETAEGIDRRGLVLALLVKLKQVCNHPVQFL----GDNSSVEHRSGKLQ 832 Query: 493 WLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF 550 L L+ R Q+ LV L++ L+E G H +S +RD F Sbjct: 833 RLTELLSEIRECGQRTLVFTQFMEMGKILQRYLQELFGEEVFFLHGSLSRKKRDAMIDAF 892 Query: 551 AEEDTGA-QVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609 + + +L + G N A+H+V +D +NP + Q R RIGQ ++++H Sbjct: 893 QQGEHAPHIFILSLKAGGSCLNLTNANHVVHYDRWWNPAVENQATDRAFRIGQKRNVEVH 952 Query: 610 VPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 T + + + TG + N + L + Sbjct: 953 KFITAGTLEERIDEMIDKKRAVSGSVLGTGEQWLTELSNSDLKKLIMLGKEA 1004 >UniRef50_A4S600 Predicted protein (Fragment) n=8 Tax=Eukaryota RepID=A4S600_OSTLU Length = 522 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 95/548 (17%), Positives = 188/548 (34%), Gaps = 43/548 (7%) Query: 151 RTSLIPHQLNIAHDVGRRHAPRV--LLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIV 207 + L +QL + +LADE+GLGKT+++ L A L++ Sbjct: 3 KAVLREYQLEGLRWNVGMYDQGCSCILADEMGLGKTLQSISFLACIKEMRHANGPHLVVC 62 Query: 208 PETLQHQWLVEMLRRFNLRFALF-----DDERYAEAQHDAYNPFDTEQLVICSLDFARRS 262 P ++ W+ E+ + F + D+ + + ++ + + + + A Sbjct: 63 PLSVLSSWMDELQKW-APSFRVVRLHSGDENERVRLRKEVVPNTESYDVAVTTYEMACNP 121 Query: 263 KQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGME 322 + + W L++DE H + ++ + +Q ++++ LLLT TP Q + Sbjct: 122 AFNVTLTQKVMWRCLILDEGHRV---KNEETAAHQVLKRIKRQ--HTLLLTGTPIQNNLH 176 Query: 323 SHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDI 382 +A L L P+ F F + N V L +L + GE ++ Sbjct: 177 ELYAILSFLHPDVFTSSEPFDKAF-NLNTSEHKVDSNLLEKAHFLMRPFILRRVKGEVEV 235 Query: 383 EPLLQAANSDSEDAQSARQELVSMLMDRHGTS-RVLFRNTRNGVKGFPKRELHTIKLPLP 441 + A+ L+ R T+ + L + T+ ++L+++ + L Sbjct: 236 SLPPKTETKIMCPLSEAQTFWYRRLLLREATALQSLEKATKGEGGADNFQKLNSLLMQLR 295 Query: 442 TQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH 501 +G E + ++ L L Sbjct: 296 KCCNHPFLFTGTD-------------------VPEDGVPIEDLISASGKLAVLDRMLQKL 336 Query: 502 R--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ- 558 + +V++ + L+ L R G A + ++R A F D+ Sbjct: 337 KEGGHRVVLFSQFTSMLDILQDFLTLR-GYTYARLDGSTNRVQRSIDIAAFNRPDSPMFA 395 Query: 559 VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQ 618 LL + G G N Q A ++FD +NP + Q + R+ RIGQ + I+ T + Sbjct: 396 FLLSTRAGGLGVNLQTADTCILFDSDWNPQVDLQAMARVHRIGQKKMVHIYRLVTAGTVE 455 Query: 619 SVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQ---HE 675 + + + L + G T ++L G D + E Sbjct: 456 ERMTQRAEKKLFLDQMV-SRGSTKAAEQSDNLDRNDLYAMLRFGVDAVFSKASGDPPTDE 514 Query: 676 ALKAQLEQ 683 L +++ Sbjct: 515 ELDILMDR 522 >UniRef50_Q7PDU2 Arabidopsis thaliana BRAHMA ortholog-related n=2 Tax=Plasmodium (Vinckeia) RepID=Q7PDU2_PLAYO Length = 1529 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 88/564 (15%), Positives = 184/564 (32%), Gaps = 79/564 (14%) Query: 121 DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADE 178 + ++ Y + S L G L+ +QL+ + + +LADE Sbjct: 598 EPINMREKYYDVAHTIKNKIIKQPSILIGGN--LMKYQLDGLEWLVSLYNNNLNGILADE 655 Query: 179 VGLGKTIEAGMILHQQLL---------------SGAAERVLIIVPETLQHQWLVEMLRRF 223 +GLGKT++ + + + +IIVP + W+ E + Sbjct: 656 MGLGKTVQTISLFAYLKELKMEENCENNINDEMNNQIGKNIIIVPLSTLPNWVNEFEKWC 715 Query: 224 N-LRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEA 282 L+ ++ + + + + + + D + K L + W+ +++DE Sbjct: 716 PTLKVIIYKGNKNERKNINKNLLENNYDICLTTFDIIIKEKNI---LGKISWNYIIIDEG 772 Query: 283 HHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQF 342 H + ++ S+ + + +LLT TP Q M+ +A L L P F F Sbjct: 773 HRI---KNDNSKLHSILSLFI--SKYRILLTGTPLQNNMKELWALLNFLLPKIFSSSTDF 827 Query: 343 VEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQE 402 + V ++ +E ++ + + +L+ D + + E Sbjct: 828 QQWFSFPLSNEQTV-----YETMTEEEELLIINRLHTILLPFMLRRLKKDVLEFLPKKYE 882 Query: 403 LVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAED 462 ++ + ++L++ N K+ L T T +++ I+ Sbjct: 883 -YNIYVQLSLYQKLLYKQIENKN---FKQINSDGTLNNKTFQNTIMQLRKIVNHPFLFTH 938 Query: 463 RARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRS--QKVLVICAKAATALQLE 520 N + E L L K+L+ C + Sbjct: 939 DYDI--------------NDFVIKSSGKFEVLDRMLPKLIKFKHKILLFCQMTKVMDIIS 984 Query: 521 QVLREREGIRAAVFHEGMSIIERDRAAAWFAEE-------------------------DT 555 R+ + +S+ +R F + D Sbjct: 985 DYFELRK-YKYHRLDGSVSLSDRRDIIDSFNQNKFVKNSDNSSQNKNDSLLLDPASKLDD 1043 Query: 556 GAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEK 615 +L + GS G N Q A +++FD FNP Q + R RIGQ + +++ Sbjct: 1044 TMIFILSTRSGSLGLNLQAADTVIIFDSDFNPHQDIQAMCRCHRIGQKNVVKVFRFITLS 1103 Query: 616 TAQSVLVRWYHEGLDAFEHTCPTG 639 + + ++ + + L+ + G Sbjct: 1104 SVEELIFQKAKDKLNINDKVIQAG 1127 >UniRef50_A8PK99 Type III restriction enzyme, res subunit family protein n=1 Tax=Brugia malayi RepID=A8PK99_BRUMA Length = 1595 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 114/673 (16%), Positives = 212/673 (31%), Gaps = 99/673 (14%) Query: 113 DRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHA-- 170 DR G+I ALR R + L +QL + + Sbjct: 415 DRRDNGKIPNKHCPALRRRPKFEKLNNIPSFLQRKDDPEHELRDYQLEGVNWMLHAWTKE 474 Query: 171 PRVLLADEVGLGKTIEAGMILHQQLLS-GAAERVLIIVPETLQHQWLVEMLRR-FNLRFA 228 +LADE+GLGKTI++ L L++VP + W E +L Sbjct: 475 NSCILADEMGLGKTIQSISFLSVLYHKYQLYGTFLVVVPLSTMASWQHEFETWAPDLNVV 534 Query: 229 LFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 + + + S + L L EW +L VDEAH L Sbjct: 535 TYVGD-------------------VTS--------RDLSFLGSFEWAVLAVDEAHRL--- 564 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 ++ S Y+++ + + LL+T TP Q ++ +A L + P +F +++F E + Sbjct: 565 KNDESLLYRSLFEFTTN--HRLLVTGTPLQNSLKELWALLHFIMPEKFDSWSEFEAEHHD 622 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM 408 + + + LL+ D E + A+ E + + Sbjct: 623 S--------------------DHKTIASLHRKLQPFLLRRVKKDVEKSLPAKVEQILR-V 661 Query: 409 DRHGTSRVLFRNTRNGVKGFPKRELH-------TIKLPLPTQYQTAIKVSGIMGARKSAE 461 D + ++ + + + + L + V A + A+ Sbjct: 662 DMTAQQKQYYKWILTKNYKELSKGVKGSINGFVNLVMELKKCCNHSSLVRSYDQAEEGAD 721 Query: 462 DRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYL--TSHRSQKVLVICAKAATALQL 519 R + +L ++ L L +VL+ + Sbjct: 722 ARLQQLL-----------------KSSGKLILLDKLLCRLQETGHRVLIFSQMVMMLDIM 764 Query: 520 EQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHM 578 ++ L+ R + M R A F ++ LL + G G N A + Sbjct: 765 QEYLQLRR-FPSQRLDGSMRSDLRKAALDHFNAPNSPDFCFLLSTRAGGLGINLATADTV 823 Query: 579 VMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP- 637 ++FD +NP Q + R RIGQ + I+ + + + +V L Sbjct: 824 IIFDSDWNPQNDLQAMSRAHRIGQKKQVNIYRLVTKASVEEEIVERAKRKLVLDHLIIQR 883 Query: 638 ---TGRTIYDS---------VYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGR 685 TGRT+ + + E F + +E + L+ Sbjct: 884 MDTTGRTVLSKTTVTNGTMPFDKQDLAMILKFGAEELFKEKEGEEQEPEVDIDNILQGAE 943 Query: 686 DRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDH 745 R + ++G E A + D++ ++ + + INQ D + Sbjct: 944 TRECDQQNSGSELLNAFRYADFSFDENKDVPSLNVTTAQTE-INQKDLTTSKSWDEIIPE 1002 Query: 746 MLVPDFPGLSEDG 758 + F + Sbjct: 1003 VDRKKFADEERER 1015 >UniRef50_Q47YP1 Snf2 family protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47YP1_COLP3 Length = 1134 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 96/541 (17%), Positives = 193/541 (35%), Gaps = 53/541 (9%) Query: 127 ALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKT 184 LR A K Q G +L +Q + + R + +LAD++GLGKT Sbjct: 635 KLRALADKLKDFQQVTTIPVPEGLNATLRTYQHQGLNWLQFLREYQLNGILADDMGLGKT 694 Query: 185 IEAGMILHQQLLSGA-AERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEA---Q 239 I+ L + G + +LI+ P ++ W E+ + L + + + E Sbjct: 695 IQTLAHLLIEKQQGRLTKPILIVAPTSVIFNWANEIDKFTPQLSYQVLHGNKRHEQFGCL 754 Query: 240 HDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAI 299 N + ++I S + L H + ++ LV+DEAH++ ++ ++ YQA Sbjct: 755 EGVENGENQVDIIITSYALITKD---LAHYTDRKFYYLVLDEAHYI---KNTKTKLYQA- 807 Query: 300 EQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAML 359 L L LT TP + + +A+ L P QF + + + Sbjct: 808 -FLTLKAQHKLCLTGTPMENHLGEFWAQFNFLLPGFLGGQRQFTKLFRTPIEKHGELE-- 864 Query: 360 LAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFR 419 + + Q I+P + D + + + + G L+ Sbjct: 865 --------------RKQLLNQRIKPFILRRTKDKIATELPPKTEIIQTLRIEGKQAELYE 910 Query: 420 NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 + R L + ++ + I G+ ++ D + + + Sbjct: 911 SVR---------------LAMDSRLKDIIADKGLKRSQIEVLDALLKLRQVCNHPKLLKL 955 Query: 480 DNATWWNFDPRVEWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEG 537 + A N ++++LM L +K+L+ + +E L + GI Sbjct: 956 EGAKKVNQSAKLDYLMETLPEQIDEGRKILIFSQFTSMLSLIEDELIDA-GIGYVKLTGS 1014 Query: 538 MSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL 597 + +R F + L+ G G N A ++ FD +NP + Q R Sbjct: 1015 TT--KRQEVVDKFQRGE-VPVFLISLRAGGVGLNLTAADTVIHFDPWWNPAVENQATDRA 1071 Query: 598 DRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYD-SVYNDLINYLAS 656 RIGQ + ++ +E + + + + + + + S+ +D+++ L + Sbjct: 1072 YRIGQNKPVFVYKLIIENSIEEKIQKIQQNKAELAKALLSEEVSDNKLSLTDDILDSLLT 1131 Query: 657 P 657 P Sbjct: 1132 P 1132 >UniRef50_A2Q9U8 Contig An01c0310, complete genome n=12 Tax=Eurotiomycetidae RepID=A2Q9U8_ASPNC Length = 1670 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 121/697 (17%), Positives = 226/697 (32%), Gaps = 63/697 (9%) Query: 51 TRVMFNPGDTITSHDGWQ--MQVEEVKEE----NGLLTYIGTRLDTEESGVALREVFLDS 104 R DT H + +V++V E GL Y DT + E + Sbjct: 535 VRYSSASPDTGRKHTFEEDVARVDDVVEMYVKFKGL-PYEEATWDTPPERSSNPERWESF 593 Query: 105 KLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRM------PYSGLRGQRTSLIPHQ 158 + + R + ++ LR R + F + G + + +Q Sbjct: 594 RAAYEDWVKREYT---HIPNQDNLRRRIAHVRKQNFSSNVVKSGQPETMTGGQI--MDYQ 648 Query: 159 LNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWL 216 + + +LADE+GLGKTI+ ++ + LI+VP + W Sbjct: 649 KDGLDWLYYMWYKQQNAILADEMGLGKTIQVIGLIATLVQYHKCWPFLIVVPNSTCPNWR 708 Query: 217 VEMLRR-FNLRFALFDDERYAEAQHDAYNPFDTEQ------LVICSLDFARRSKQRLEHL 269 E+ +LR + ++ Y F + +V+ S + R L Sbjct: 709 KEIKTWVPSLRVVTYYGSAFSRKLAQDYEMFADDDTSLRCHVVVASYETLVDDASRR-LL 767 Query: 270 CEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLR 329 + W L+VDE L ++ S+ Y A+ ++ P +LLT TP Q + F L+ Sbjct: 768 SKVPWAGLIVDEGQRL---KNDKSQLYDALSRI--RFPFKILLTGTPLQNNIRELFNLLQ 822 Query: 330 LLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAA 389 DP++ E + LS + + L MI L+ Sbjct: 823 FCDPSK--RADDLENEYGD----------------LSTENILELHNMIR----PFFLRRT 860 Query: 390 NSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELH-TIKLPLPTQYQTAI 448 + + + + + L++ K Q + Sbjct: 861 KAQVLSFLPP-VAQIIVPVSMTTVQKKLYKFILAKNPQLIKAIFQRKEGTRALKQTEKHN 919 Query: 449 KVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH--RSQKV 506 + +M RK E + + + + L L R +V Sbjct: 920 LNNILMQLRKCLCHPFVYSRAIEEKTSNAAVSHRHLVDAAAKFQLLELMLPKLKNRGHRV 979 Query: 507 LVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEI 565 L+ +E L E G+ MS +E+ + + E++ LL + Sbjct: 980 LIFSQFLENLDIIEDFL-EGVGLTYLRLDGRMSSLEKQKTIDAYNAEESPYFAFLLSTRS 1038 Query: 566 GSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWY 625 G G N A +++ D FNP Q + R RIGQ + + + +A+ +++ Sbjct: 1039 GGVGINLATADTVIIMDPDFNPHQDMQALSRAHRIGQKNKVLVFQLMTRASAEEKIMQIG 1098 Query: 626 HEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGR 685 + + + DL L Q DD + R E++ L++ + Sbjct: 1099 KKKMVLDH-VLIDRMVSEEDDGRDLETILRHGAQALFDDDDSGDVRYDSESVDKLLDRSQ 1157 Query: 686 DRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNL 722 + + + + +D+ NL N+ Sbjct: 1158 AE-QASTPDDSNQGNQFSFARVWANDNQNLEDQLQNV 1193 >UniRef50_B9MLI9 Non-specific serine/threonine protein kinase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLI9_ANATD Length = 1112 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 86/546 (15%), Positives = 178/546 (32%), Gaps = 61/546 (11%) Query: 120 IDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLAD 177 + + D F + + K + L L +Q + + +LAD Sbjct: 620 VSKNDAFDIYVQKMKRVEDTTIEIPEHLDSM---LREYQKVGVKWLSHLYLNGFGGILAD 676 Query: 178 EVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAE 237 ++GLGKT++ + A L++ P +L + W E ++F + Sbjct: 677 DMGLGKTVQVLSFISACKDK-IAGPCLVVAPTSLVYNWQQE-TQKFTPDLKTVVVDGTPA 734 Query: 238 AQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQ 297 + + +VI S +R + L E+ + VVDEA H+ ++ S + Sbjct: 735 KRSEIIENLKDYDIVITSYSLLKRDIDLYKDL---EFSVCVVDEAQHI---KNPQSLSKE 788 Query: 298 AIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVA 357 A+ ++ + LT TP + + ++ + P +F E + + Sbjct: 789 AVSRI--NAKCCFALTGTPIENNLSELWSIFDFVLPGYLGTHTRFSERFEKPIEKQNDEK 846 Query: 358 MLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVL 417 L +++ + +L+ D + E ++ + Sbjct: 847 AL---------------KLLQKMIAPFVLRRLKKDVLSELPEKIETNLE-VNMTPEQENI 890 Query: 418 FRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSA----EDRARDMLYPERI 473 ++ L + I + G ++ + +P+ Sbjct: 891 YK---------------LYLLKAREDIKKEIDLKGFEKSKIKIFSIFTRLRQICCHPKLF 935 Query: 474 YQEFEGDNATWWNFDPRVEWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGIRA 531 Q +EG ++E L +V+V LE+ ++E+ G Sbjct: 936 LQNYEGS-------SGKIELFEEILEDVIESGHRVVVFSQWVEMLKILEERIKEK-GFEY 987 Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLE 591 ER F L+ + G G N A ++++DL +NP + Sbjct: 988 FYLDGSTKSEERIDMVNKFNSG-QKQVFLVSLKAGGFGLNLTGADVVILYDLWWNPAVEN 1046 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI 651 Q + R RIGQ + +Q+ T + + + D F+ + +T + D + Sbjct: 1047 QAMDRAHRIGQENSVQVFRLITRNTIEERIFELQQKKKDLFDSIVSSAQTFLTELSEDEL 1106 Query: 652 NYLASP 657 L Sbjct: 1107 MQLLEE 1112 >UniRef50_B5Y557 Predicted protein (Fragment) n=2 Tax=Bacillariophyta RepID=B5Y557_PHATR Length = 509 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 88/519 (16%), Positives = 165/519 (31%), Gaps = 51/519 (9%) Query: 154 LIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETL 211 L +QL + + +LADE+GLGKTI+ ++ LL G + L++ P Sbjct: 11 LKDYQLEGVRWLASLYENGVSGILADEMGLGKTIQCVALIAHLLLQGVSGPFLVVAPLAT 70 Query: 212 QHQWLVEMLRRFNL-RFALFDDERYAEA------QHDAYNPFDTEQLVICSLDFARRSKQ 264 W+ E + + + ++ S + + R + Sbjct: 71 LPNWVREFEKWLPQHPVVRYHGTAPEREAMLKGPLNPKLRRSPNFPFIVTSYEVSIRDQA 130 Query: 265 RLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESH 324 +LE L E+ L+VDE H L ++ ++++L LLLT TP Q ++ Sbjct: 131 KLEKLT--EFTYLIVDEGHRL---KNHRCTLLTSLKRL--KAANRLLLTGTPIQNTLDEL 183 Query: 325 FARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEP 384 ++ L ++P F D + F + + + N + E Sbjct: 184 WSLLNFVNPQIFDDLSVFQSWFGFKDIGQKTRGGTDETSIIIEERKNQTVTKLHEILRPF 243 Query: 385 LLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGF-----PKRELHTIKLP 439 LL+ D ++E++ ++ G+ T+ Sbjct: 244 LLRRIKLDVLSEMPPKKEVI------------VYSGISKLQAGYADLIDKGTLRDTLIAQ 291 Query: 440 LPTQYQTAIKVSGIMGARKSAEDRAR--DMLYPERIYQEFEGDNATWWNFDPRVEWLMGY 497 +T + + +M RK+ + + P + L Sbjct: 292 GIENGRTLSQTNKLMNHRKNINHPFLFGEPIDPASGVHLGTAHPQLLVRASGKFALLDRM 351 Query: 498 LTSH--RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAE--- 552 L+ +VL+ + +E L R +I ER R F Sbjct: 352 LSRLYRDGHQVLIFSQMTSVLNVMEDYLLFR-NWNFCRIDGSTNIDERQRQMDQFNAEKT 410 Query: 553 ----------EDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQ 602 +D LL + G G N A +++FD +NP Q + R R+GQ Sbjct: 411 AGENGRRSKADDRHFVFLLSTRAGGLGINLTSADTVIIFDSDWNPHADSQAMDRAHRLGQ 470 Query: 603 AHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT 641 + ++ + ++ T G Sbjct: 471 DLPVAVYRLLTVNSVDIEMMEKQISKKKLERMTIAGGDF 509 >UniRef50_A0BRC7 Chromosome undetermined scaffold_122, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0BRC7_PARTE Length = 1405 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 97/565 (17%), Positives = 195/565 (34%), Gaps = 59/565 (10%) Query: 139 QFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLL 196 Q+ + R L +QL + + + VLLADE+GLGKTI++ L+ + Sbjct: 437 QYTPRTQTIYKDRKLLRDYQLESLNWMIDAYYNNRNVLLADEMGLGKTIQSIAFLNHLVS 496 Query: 197 -SGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYA--EAQHDAYNPFD------ 247 LII P + W +L L+ D++ Y F Sbjct: 497 MESCRGPFLIIAPLSTLQHWKRSCEDWTSLNAVLYYDQQGQPGRQAIRDYEWFYTDISLK 556 Query: 248 ----------TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQ 297 Q++I S + + + + + ++VDEAH L ++ ++ Sbjct: 557 GNTLPSQELYKFQILITSFEVFNQDHSTY--IQQIPFQFIIVDEAHRL---KNQNAKILA 611 Query: 298 AIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVA 357 ++++L +++LT TP Q E ++ L ++P +F + QF + + Sbjct: 612 SLKRLV--CSRIMILTGTPVQNNPEELWSLLNFIEPYQFPNLNQFKSQFGDLNTAEQ--- 666 Query: 358 MLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVL 417 E + + +L+ D E + QE + ++ + L Sbjct: 667 ----------------IEKLNKTLKPYILRRQKEDVEQSIPPLQENIID-VELTNVQKTL 709 Query: 418 FRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEF 477 +R K + + + + + + ++ D+L E+ Sbjct: 710 YRALYERNKSALIQGFSQQTAQIASLNNLDMHLRKLCNHPLLLKEMHSDIL--EKSKGNE 767 Query: 478 EGDNATWWNFDPRVEWLMGYLTSHRSQ--KVLVICAKAATALQLEQVLREREGIRAAVFH 535 + ++ L L + K+L+ LE+ L+ + I+ Sbjct: 768 GEYQKILIEYSGKMVLLDKMLKKFLKEDKKMLIFSQFTNMLALLEEYLQFNQ-IKYEKIT 826 Query: 536 EGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRI 594 + I+R A F ++ G Q LL ++ G +G N A +V+FD +NP Q Sbjct: 827 GDIKQIDRQNAIDRFNDQKKGRQVFLLSTKAGGQGINLTAAEIVVIFDSDWNPQNDIQAT 886 Query: 595 GRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIY-----DSVYND 649 R RIGQ + ++ + T ++ + L + G + Sbjct: 887 ARAHRIGQDKQVTVYRFITKNTYEAKMFERAFAKLGLDQAIFMNGEFKSSDQTNRKLSKK 946 Query: 650 LINYLASPDQTEGFDDLIKNCREQH 674 + L + + +Q+ Sbjct: 947 ELEILLKQGSLGLLEHFGQESIDQN 971 >UniRef50_C7YQ78 SNF2 family chromodomain-helicase DNA-binding protein n=2 Tax=Sordariomycetes RepID=C7YQ78_NECH7 Length = 1557 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 116/703 (16%), Positives = 225/703 (32%), Gaps = 71/703 (10%) Query: 68 QMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFA 127 + V E+G + + T E + Q A + + DR Sbjct: 375 ERVVATRDGEDGDEYLVKWKGLTYEECTWEAAADISDMFQDQIDQYLDRASRSWQSDRKE 434 Query: 128 LRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTI 185 +R + + P + G L QL + + V+LADE+GLGKT+ Sbjct: 435 TSLDSRSRMVKLEKQPDYIVGG---ELRSFQLRGLNFLCLNWCRGNNVILADEMGLGKTV 491 Query: 186 EAGMILHQQL-LSGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAY 243 + L L++ P ++ W +L + ++ A + Sbjct: 492 QTVSFLSWLRNARHQEGPSLVVAPLSVIPAWCDTFNTWSPDLNYVVYLGPEDARNIIREH 551 Query: 244 NPF-------DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREY 296 +++ S +F + + L +W L VDEAH L ++ S+ Y Sbjct: 552 ELLVDNNPKKPKFNILVTSYEFILQDW---QFLQSIKWQTLAVDEAHRL---KNRESQLY 605 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAV 356 ++ +P +L+T TP Q + A L L+P + D++ Sbjct: 606 S--RLVSFGIPCKVLITGTPIQNNLAELSALLDFLNPGK-----------VAIDEDLDSL 652 Query: 357 AMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRV 416 + A KL + + +L+ E + E + ++ Sbjct: 653 SANDAQEKLQQ---------LHKAIAPFILRRTKETVESDLPPKTEKIIR-VELSDVQLD 702 Query: 417 LFRNTRNGVKGFP-------KRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY 469 ++N K L I + L G + R D + Sbjct: 703 YYKNILTRNYTALCDATNGHKNSLLNIMMELKKISNHPYMFPGAEEKVLAGSVRREDQI- 761 Query: 470 PERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLRERE 527 ++ L L+ + +VL+ L L R Sbjct: 762 ------------KGLIASSGKMMLLDQLLSKLKKDGHRVLIFSQMVKMLDILGDYLSLR- 808 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFN 586 G + ++ R A F +D+ LL + G G N A +V+FD +N Sbjct: 809 GYKFQRLDGTIAAGPRRMAINHFNADDSDDFCFLLSTRAGGLGINLMTADTVVIFDSDWN 868 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTG--RTIYD 644 P Q + R RIGQ + I+ ++T + ++ L T G Sbjct: 869 PQADLQAMARAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTIQAGVTDDGKA 928 Query: 645 SVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGG-EKAQALA 703 + +L D +D+ + + + Q ++RL ++ + E A+ Sbjct: 929 AFKEELNKKGLKVDGPSSSEDIQMVLKMRSSKMFEQ-SGNQERLEQLDIDSILENAEVTK 987 Query: 704 ESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHM 746 ++++ + ++ N I + DD + + P++ + Sbjct: 988 TKVDDKINLSSGGIDWDNFMQITDVKVDDLNLDWDQIIPAEKL 1030 >UniRef50_B6QF08 Chromatin remodeling complex subunit (Chd3), putative n=9 Tax=Eurotiomycetidae RepID=B6QF08_PENMQ Length = 1605 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 115/730 (15%), Positives = 236/730 (32%), Gaps = 56/730 (7%) Query: 70 QVEEVKEE----NGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDR 125 +V +VKE GLL S R + +D + + + + Sbjct: 654 RVRDVKEAYVKYKGLLYEDAVWETVPSSTETERWNDFKAAYDDWVLKDYVKVPKGSSLKK 713 Query: 126 FALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGK 183 R + + + + S L G + + +QL+ + + + +LADE+GLGK Sbjct: 714 HLEIVRGQDFKTLVKKAQPSCLTGGKI--MDYQLDGLNWLYYKWYQGQNAILADEMGLGK 771 Query: 184 TIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDA 242 TI+ L + LI+VP + W E+ + +LR + A Sbjct: 772 TIQIISFLSTLIEDHKCWPFLIVVPNSTCPNWRREVKKWAPSLRVVTYYGSAVARKLAHD 831 Query: 243 YNPFDT------EQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREY 296 Y F +++ S + K R L W LVVDE L ++ + Y Sbjct: 832 YEMFPKNARDLRAHVLVTSYETMVDDKARR-VLAGIPWAGLVVDEGQRL---KNDRNLLY 887 Query: 297 QAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAV 356 ++ + ++P +LLT TP Q + F ++ DP + + E + Sbjct: 888 SSLSSI--NIPFKVLLTGTPLQNNIRELFNLIQFCDPTQ--NAQDLAAEYET-------- 935 Query: 357 AMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRV 416 L+ + + L I L+ + +++ + + Sbjct: 936 --------LTKENVPELHAKIR----PFFLRRTKAQVLTFLPPMAQIIIP-VTMSVVQKK 982 Query: 417 LFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQE 476 L+++ K + + Q + + +M RK E Sbjct: 983 LYKSILAKNSKLIKSIFQSNQDAQNKQNERHSLSNILMQLRKCLCHPFVYSRQIEERISN 1042 Query: 477 FEGDNATWWNFDPRVEWLMGYLT--SHRSQKVLVICAKAATALQLEQVLREREGIRAAVF 534 + +++ L L R +VL+ +E L + G+ Sbjct: 1043 PTLSHRNLVEASGKLQLLELLLPRLKERGHRVLLFSQFLDNLDIVEDFL-DGLGLLYCRL 1101 Query: 535 HEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQR 593 M E+ + + D+ LL + G G N A +++ D FNP Q Sbjct: 1102 DGSMGAHEKQKQIDAYNAPDSKYFAFLLSTRSGGVGINLATADTVIIMDPDFNPHQDIQA 1161 Query: 594 IGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINY 653 + R RIGQ + + ++A+ +++ + + D DL + Sbjct: 1162 LSRAHRIGQQKKVLVFQLMTRESAEEKIMQIGKKKMALDHVLIEKMDADEDE-GLDLESI 1220 Query: 654 LASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDD-- 711 L + DD + E+++ L++ + ++ ++ ++Q + D+ Sbjct: 1221 LRHGAEALFEDDTTGDVHYDAESVEKLLDRSQAENTQVGNDASAESQFSFARVWANDNAA 1280 Query: 712 -DTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALA 770 + L + + + + + + A Sbjct: 1281 LEDRLGDSEAATPVNTNLWEKILAERQKAVDEEALADAQALGRGKRKRAVVNYS---AKD 1337 Query: 771 REDAQFITWE 780 RED + ++ Sbjct: 1338 RED-EQLSPG 1346 >UniRef50_A5DW13 Chromo domain protein 1 n=10 Tax=Saccharomycetales RepID=A5DW13_LODEL Length = 1500 Score = 470 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 95/618 (15%), Positives = 198/618 (32%), Gaps = 62/618 (10%) Query: 151 RTSLIPHQLNIAHDVGRRHAPR--VLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIV 207 L QL + + + +LADE+GLGKT++ L + L++V Sbjct: 408 NGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIFSRRQYGPHLVVV 467 Query: 208 PETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAYNPFD----------TEQLVICSL 256 P + W + ++ + A Y + +++ + Sbjct: 468 PLSTIPAWQETFEKWAPDVNCVYYLGNGEARKTIREYEWYTTGGSGGGRKPKFNILLTTY 527 Query: 257 DFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATP 316 ++ + + L +W L VDEAH L ++A S Y++++ LL+T TP Sbjct: 528 EYILKDRAE---LGSFKWQFLAVDEAHRL---KNAESSLYESLKSF--KCANKLLITGTP 579 Query: 317 EQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEM 376 Q M+ A L P +F +E++ ++ + + + + Sbjct: 580 LQNNMKELAALCDFLMPGKFS-----IEQEIDFDTPDEDQELYI--------------KD 620 Query: 377 IGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTI 436 + ++ +L+ D E + + E + ++ ++N Sbjct: 621 LQKKINPFILRRLKKDVETSLPGKTERILR-VELSDIQTDYYKNIITKNYAALNAGNKGS 679 Query: 437 KLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMG 496 ++ L K S AE+R +G ++ L Sbjct: 680 QISLLNVMSELKKASNHPYLFDGAEERVLSRAGSYSRENVLKG----MVMSSGKMVLLEQ 735 Query: 497 YLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEED 554 LT + +VL+ L + + G G+ +R + F D Sbjct: 736 LLTRLKKEGHRVLIFSQMVRMLDILGDYMSIK-GYAFQRLDGGIPSSQRRISIDHFNAPD 794 Query: 555 TGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYL 613 + LL + G G N A +++FD +NP Q + R RIGQ + + ++ Sbjct: 795 SKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNQVLVYRFVS 854 Query: 614 EKTAQSVLVRWYHEGLDAFEHTCPTG-------RTIYDSVYNDLINYLASPDQTEGFDDL 666 + T + ++ + + G + ++ + F D Sbjct: 855 KDTVEEQILERARKKMILEYAIISLGITDPSAKKNSKAEPSGSELSQILKFGAGTMFKDN 914 Query: 667 IKNCREQHEALKAQLEQGRDR-----LLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 + ++ L L D L E + E + + + D + + I Sbjct: 915 DNQQKLENLNLDDVLNHAEDHVTTPDLGESNLGSEEFLKQFEVTDYKADIEWDDIIPQEE 974 Query: 722 LFDIIGINQDDRGDNMIV 739 L + + + + Sbjct: 975 LTKLKDEEKRRADEQFLQ 992 >UniRef50_Q67RQ1 SNF2 family helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67RQ1_SYMTH Length = 989 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 108/653 (16%), Positives = 202/653 (30%), Gaps = 79/653 (12%) Query: 15 SELGLGTVVAVDARTVTLLFPST-GENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEE 73 S GL +V V P T E R AR P+ ++ G + + V Sbjct: 408 SMFGLHQIVNVRWDVALGGTPLTLDELRHLARQKRPLVQMQ---GRWVRVDERTLAAVLR 464 Query: 74 VKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRAR 133 E++G ++ L + L + D A + Sbjct: 465 RIEQHG------------------GQMELGTALRLAPEADEATATG-------WIAELLE 499 Query: 134 KYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMIL 191 + P G +L P+Q + RR LAD++GLGKT++ +L Sbjct: 500 RLQEPARMEPVPTPGGFAGTLRPYQQRGLAWLAFLRRWGLGACLADDMGLGKTVQLIALL 559 Query: 192 HQQLLSGAA-ERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQ 250 + +G A L++ P ++ W E+ R L + D Sbjct: 560 LHEREAGWAAGPTLLVCPVSVLGNWCRELARFAPGLRVLVHHGPGRLGEPDFARQAGAHD 619 Query: 251 LVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVL 310 +V+ + R L + W+ +V DEA +L ++ ++ +A+ L+ + Sbjct: 620 VVLTTYSLLARDAAL---LGQVTWNGIVADEAQNL---KNPDTQHARALRSLSG--GYRI 671 Query: 311 LLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDEL 370 LT TP + + ++ + L+P +F Sbjct: 672 ALTGTPVENHLGDLWSLFQFLNPGLLGSREEFERRYAVPIQRYQDEEA------------ 719 Query: 371 NMLGEMIGEQDIEPLLQAANSD-SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFP 429 + Q +L+ +D + + + L+ L+ Sbjct: 720 ---AARLRRQVGPFILRRQKNDPAIAPDLPDKLENTELVTLSVEQAALYEAIVQ------ 770 Query: 430 KRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDP 489 + A + + +P + Sbjct: 771 ---------ETLERAAQADGIQRQAAVLAGLTRLKQVCNHPA-----AATGDGPLVGRSG 816 Query: 490 RVEWLMGYLTS--HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAA 547 +++ L+ L ++ L+ A +L+ L E G H G ERDR Sbjct: 817 KIDRLVQLLQEVLAAGEQALLFTQFARFGGRLQAYLAETLGCEVLFLHGGTPQPERDRLV 876 Query: 548 AWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQ 607 A F + +L + G G N A+H+ D +NP + +Q R RIGQ + Sbjct: 877 ARFQAGEAPLFIL-SLKAGGLGLNLTAATHVFHVDRWWNPAVEDQATDRAYRIGQTRRVL 935 Query: 608 IHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT 660 +H T + + R E +G + + + + L + D+ Sbjct: 936 VHRLITAGTLEERIDRLLAEKRALAGQVIISGESWLGQLSTEELRALIALDRE 988 >UniRef50_B0D0U7 Chromodomain-helicase DNA-binding protein (Fragment) n=5 Tax=Basidiomycota RepID=B0D0U7_LACBS Length = 1291 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 109/743 (14%), Positives = 228/743 (30%), Gaps = 86/743 (11%) Query: 59 DTITSHDGWQMQVEEVKEENGLLTYIGTRLDTE-ESGVALREVFLDSKLVFSKPQDRLFA 117 + + V + ++G + Y E + ++ RL Sbjct: 187 QELEMFRNVERIVAHRESKDGDMEYFCKWNSLNYEHCTWELQKDVNPIAKDEIAAYRLRE 246 Query: 118 GQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLL 175 + + R + + ++ ++ L QL + + +L Sbjct: 247 AEGKFPYKSVSYSRQGRPTFQKITSDPDYIQATGGELKDFQLTGLNWLAYLWSKGENGIL 306 Query: 176 ADEVGLGKTIEAGMILHQQLLS-GAAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDE 233 ADE+GLGKT++ L L+IVP + W + ++ + Sbjct: 307 ADEMGLGKTVQTVAFLSYLFHEMHQYGPFLVIVPLSTITAWQTQFAAWAPDMNVITYIGT 366 Query: 234 RYAEAQHDAY-----NPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288 A + N +++ + + R + L + +W L VDEAH L Sbjct: 367 AAAREVIRTHEFGPSNKKLKMNVLLTTYELTLRDSKE---LGDIKWQALAVDEAHRL--- 420 Query: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKN 348 +++ S+ Y+A+ + LL+T TP Q ++ + + L P +F +F Sbjct: 421 KNSESQLYEALRSFSAAS--KLLITGTPLQNNVKELLSLMHFLMPEKFALTNEFD----- 473 Query: 349 YRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLM 408 L++ + + + EQ +L+ D + + E + + Sbjct: 474 ----------------LTDIDHEEKIKELHEQLESLMLRRLKKDVLTSLPTKSERILR-V 516 Query: 409 DRHGTSRVLFRNTR--------NGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSA 460 + ++N G L I + L G Sbjct: 517 EMSALQTHFYKNILTKNFAGLVKSANGNNNISLLNIAMELKKAANHPYLFDGA------- 569 Query: 461 EDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQ 518 E E ++ L L R +VL+ Sbjct: 570 ----------EVRTDNNEETLKGLVMNSGKMVLLDKLLARLRQDGHRVLIFSQMVRMLDI 619 Query: 519 LEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASH 577 L + R G ++ R ++ A F + LL + G G N + A Sbjct: 620 LSDYMSLR-GYLHQRLDGMVASEARKKSIAHFNTPGSPDFAFLLSTRAGGLGINLETADT 678 Query: 578 MVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP 637 +++FD +NP Q + R RIGQ + ++ + T + ++ + + Sbjct: 679 VIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDVLERAKKKMVLEYAIIN 738 Query: 638 TGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGE 697 T + + PD D+L + + ++ Q +L E+ + Sbjct: 739 QMDTSQAHLSSKATKDPHKPD-NLSKDELTAVLKYGAQKMQVDDSQQSKKLDEMDLDDIL 797 Query: 698 KAQALAESI--------EEQDDDTNLIAFA--------MNLFDIIGINQDDRGDNMIVLT 741 E++ + L FA MN DII +++ + + Sbjct: 798 NRAEDHETMAQAGEAGGASLGGEGFLAQFAAVSDVKNDMNWEDIIPLDERQKFEADEDER 857 Query: 742 PSDHMLVPDFPGLSEDGITITFD 764 ++ + + ++++ Sbjct: 858 KAEEIAAQELRDRKRTHAPVSYE 880 >UniRef50_B8P198 Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8P198_POSPM Length = 1300 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 110/614 (17%), Positives = 203/614 (33%), Gaps = 47/614 (7%) Query: 81 LTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQF 140 + D S V + + + +D + LR A Sbjct: 678 VVRAIGSTDVLPSPVTVPDDERTPDAADANSEDEEVSSIP-----MYLRLYAVAPVEWDL 732 Query: 141 RMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQL-LS 197 R SL P+Q + H +LADE+GLGKTI+ +L Sbjct: 733 SSKVKPPFLLRGSLRPYQQAGLEWLASLHTNNLNGILADEMGLGKTIQTISLLAHLACDR 792 Query: 198 GAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFD---TEQLVIC 254 G LIIVP ++ W +E ++F F + + + + ++ + + Sbjct: 793 GIWGPHLIIVPTSVLLNWEMEF-KKFLPGFKVLSYHGNTKRRKELRQGWNNKYHFNVCVT 851 Query: 255 SLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTA 314 S A R W +++DEAH + ++ S+ + + L LLLT Sbjct: 852 SYTLASRDAHV---FKRKPWYYMILDEAHMI---KNFKSQRWNIL--LMFRSFRRLLLTG 903 Query: 315 TPEQLGMESHFARLRLLDPNR-FHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNML 373 TP Q + +A L+ L F + +F + P D + + + Sbjct: 904 TPLQNNLTELWALLQFLMSGTNFANLKEFGDWFSREPPPHDVRTVEGYRRFRTWQQKAAT 963 Query: 374 GEMIGEQDIEPLLQ--AANSDSEDAQSARQELVSMLMDR------HGTSRVLFRNTRNGV 425 L+ SE+ + + L L + L + T V Sbjct: 964 IAKWAHIGYVNRLRCSRLPLYSEETIAIARSLYEPLRPMDELPATSWSMPTLAQTT---V 1020 Query: 426 KGFPKRELHTIKLPLPTQYQTAIKVSGIMG-----------ARKSAEDRARDMLYPERIY 474 K + KR ++ + T + V+ M + ++ + +L+ + Sbjct: 1021 KSYAKRVEDMAEVIDKFAFATPVVVARDMPSIALSGFDETLLPRQSDLQFDAVLHRASVK 1080 Query: 475 QEFEGDNATWWNFD-PRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRA 531 + + + +D +++ L L + ++L+ LE L G Sbjct: 1081 LQIAFPDPSLLQYDCGKLQELARLLRERKAGGHRILIFTQMTKILDILEIFLNLH-GYLY 1139 Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLE 591 I +R F + + S G G N A ++ +D FNP + Sbjct: 1140 LRLDGATKIEDRQYITERFNSDSRIFCFISSSRSGGVGINLTGADTVIFYDSDFNPQMDR 1199 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLI 651 Q R RIGQ D+ I+ E T + L+R ++ G + S+++D Sbjct: 1200 QCEDRAHRIGQIRDVHIYRFISEHTVEEALLRKANQKRSLDNIVIQQGEFDWRSLFSDET 1259 Query: 652 NYLASPDQTEGFDD 665 + + E +D Sbjct: 1260 ALTKALGEFEDSED 1273 >UniRef50_A9UQT1 Predicted protein (Fragment) n=1 Tax=Monosiga brevicollis RepID=A9UQT1_MONBE Length = 470 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 85/495 (17%), Positives = 169/495 (34%), Gaps = 34/495 (6%) Query: 154 LIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQ-LLSGAAERVLIIVPET 210 L +QL + + +LADE+GLGKTI++ L G L++ P + Sbjct: 1 LKGYQLKGLRWLANLYEQGINGILADEMGLGKTIQSISTLAHLAEHEGIWGPFLVVTPAS 60 Query: 211 LQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLC 270 H W E+ RF + A + + S + + + Sbjct: 61 TLHNWCEEV-SRFTPELKALTAGIGSGAPVANCMAWQ-----VTSYEIVVKDAKY---FN 111 Query: 271 EAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRL 330 W +++DEA + + + S+ + + L + LLLT TP Q M +A L Sbjct: 112 RVHWQYMILDEAQAI---KSSTSQRWNTL--LKFNCRNRLLLTGTPIQNTMAELWALLHF 166 Query: 331 LDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAAN 390 + P F +F E + +KL +L L ++ +L+ Sbjct: 167 IMPTLFDSHDEFNEWFSKDIES----HAQNSSSKLDEKQLQRLHMILQ----PFMLRRIK 218 Query: 391 SDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV 450 + E+ + E++ ++R ++ +K + + + ++ A Sbjct: 219 RNVENELPDKVEVMIKCP-LSARQSRIYRRLKSNIKRDQLSAITSAAMAPVSRSSRAED- 276 Query: 451 SGIMGARKSAEDRARDMLYP----ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQ 504 + + +P R + + +++ L L + Sbjct: 277 KALSSLLNMVMQFRKICNHPNLIARRPVRSPVTHAQLFVADCAKLQVLDDMLRRLKAGGH 336 Query: 505 KVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSE 564 +VL+ LE+ L R+ + I ER A F D +L + Sbjct: 337 RVLIYSQMTKMIDLLEEFLTHRQ-YKYVRLDGSSKISERRDMVADFQSRDDIFAFILSTR 395 Query: 565 IGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW 624 G G N A ++ +D +NP + +Q + R R+GQ + ++ + + ++ Sbjct: 396 AGGIGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTRTVTVYRLITRNSVEERILAR 455 Query: 625 YHEGLDAFEHTCPTG 639 E + G Sbjct: 456 AQEKSKVHQMVIQGG 470 >UniRef50_UPI000179149B PREDICTED: similar to predicted protein n=1 Tax=Acyrthosiphon pisum RepID=UPI000179149B Length = 795 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 100/635 (15%), Positives = 202/635 (31%), Gaps = 56/635 (8%) Query: 79 GLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSE 138 + TYI R E +E+ +K+ + P ++ + + Sbjct: 154 QVDTYIKIRSAEEGVIQKRKELEKSNKVDENVPIKVEVNPNTVSNNQPIENEEYEECYLK 213 Query: 139 QFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLL 196 F+ P +L +Q + + +LAD++GLGKTI+ L Sbjct: 214 LFKQPIL----FNGTLKNYQKEGLLWIRTLFENGLNGILADDMGLGKTIQTIAFYCFLLE 269 Query: 197 SGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTE------- 249 G + +L+I P + WL E +F+ + +H + F+T Sbjct: 270 MGISGPLLVIAPLSTIPNWLSEF-SKFSPQLKTLLYHGKDTQRHKIRSKFNTNYKVGNLN 328 Query: 250 --QLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVP 307 +VI + + R ++ L +W + +DE H L +++ + + + + A Sbjct: 329 CKSIVITTYEILRSD---IKFLKSYDWKYITIDEGHKL---KNSLTLTNRCLREFA--CA 380 Query: 308 GVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQ--KNYRPVADAVAMLLAGNKL 365 L+LT TP Q M + L +L P F+D F ++ D + + +++ Sbjct: 381 NKLILTGTPIQNNMNELWTLLNVLMPQLFNDIKDFSSWFVINDFHGTNDKIVNIATKDEI 440 Query: 366 SNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVL--FRNTRN 423 N + +L I + E A + + + ++ + N Sbjct: 441 LNIIVKILKPFILRRQKTETDLNLPPKKEIVIYAPITELQHKLYKATLAKEMNTLLNKEQ 500 Query: 424 GVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAE--------------DRARDMLY 469 ++ + +Y + K + + Sbjct: 501 VIQNEFGVRPKRKCVQSIQRYTEDRAIRKTEPNPKVEPKDKAISLVLLNPFIQLKKISNH 560 Query: 470 PERIYQEFEGD------NATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQ 521 P ++ + + + L L+ + KVL+ +E+ Sbjct: 561 PYLVHMPLIPEKKKIRVDENIIKASGKFLILDAMLSKLKLLGHKVLLFSTMTQLLDLIEE 620 Query: 522 VLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMF 581 L R + M I R +A F +L+ + G G N A +++F Sbjct: 621 FLIFRS-YKYTRLDGTMDIANRVKAITTFTNHPDCFLMLISTRAGGLGLNLTAADTVIIF 679 Query: 582 DLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRT 641 D +NP Q R RIGQ + ++ + T ++ + G+ Sbjct: 680 DSDWNPQCDLQAQDRCHRIGQVKPVVVYRLCTKSTVDENILAHAAAKRKLEKIVIGNGKF 739 Query: 642 IYDSVY-----NDLINYLASPDQTEGFDDLIKNCR 671 ++ + I E D L+ Sbjct: 740 DLMNLLESSDYDKQIQTNGFILSDEELDSLLDRSD 774 >UniRef50_C5KED9 Chromodomain helicase dna binding protein, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KED9_9ALVE Length = 945 Score = 468 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 102/659 (15%), Positives = 213/659 (32%), Gaps = 83/659 (12%) Query: 151 RTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMILHQQLLS-GAAERVLIIV 207 R +L Q+ + +LADE+G+GKT++ + L + + G LI+ Sbjct: 32 RDTLFGFQVEGIQWLLHNWSQYRGSILADEMGMGKTVQTAVFLSAVMATVGGTGPCLIVA 91 Query: 208 PETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNP--------------------- 245 P + W E+ + L + ++ Sbjct: 92 PLSTLRHWQRELRKWAPELNVVVMAGSSEDRDIIADFDMSWININNGHREKEPLKHRADP 151 Query: 246 --FDTEQLVICSLDFAR--RSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQ 301 +V+ S + ++ + L W +LV+DE H + ++ S +A+ Sbjct: 152 QFCPKFDVVVTSYEIFLTCSNRSNITSLTNYNWRVLVLDEGHRV---KNHLSHSTKALAH 208 Query: 302 LAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFA---------QFVEEQKNYRPV 352 +A +V ++LT TP Q + ++ L L+D RF F E Q Sbjct: 209 IA-NVQHTVILTGTPIQNNLRELWSILHLVDKKRFATFEGVVAELQKDTPDEGQSGSATS 267 Query: 353 ADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHG 412 + N+ + + E +L+ SD+ + E + ++ Sbjct: 268 NHGDGSSEGKKSEIDSVANLDLDKVTEVLRPYMLRRYKSDAMKKVPPKLEHIIE-VEFTT 326 Query: 413 TSRVLFRNTRNG------VKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARD 466 R ++++ G K L+ I + L +SG+ + A Sbjct: 327 LQRRVYKSVYEGKIYSLVNGKGGKSSLNNIAMELRKCCAHPYLISGVEDSHLEALG---- 382 Query: 467 MLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLR 524 + + ++ +L + R +K+L+ +E L Sbjct: 383 ------VKPDSAVAMQNLTEMSGKLVFLEKLIPQLREKKEKLLIFSQFKIVLDIIEDWLT 436 Query: 525 EREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDL 583 ++ + +S +R A F ++ + LL + G G N AS +V++D Sbjct: 437 WKK-LPVERLDGSVSGGKRQAAIDRFNDKKHDSFAFLLTTRAGGVGINLTSASVVVIYDS 495 Query: 584 PFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIY 643 +NP Q R RIGQ ++++ + + L + L + + Sbjct: 496 DWNPQNDNQAQARCHRIGQTKTVRVYRLLTRNSYEEKLFEIASKKLGLEQAIMSSVTANS 555 Query: 644 D-SVYNDLINYLASPDQTEGFDDLIKNCREQH-EALKAQLEQGRDRL------------- 688 + ++ + +L F++ E +L + R + Sbjct: 556 ELNLSKQELEHLIKEGAYAAFEEHSGREEEFRSASLDDIMSSDRIKTVTYGTIVSGGHRS 615 Query: 689 ---LEIHSNGGEKAQALAESIE--EQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTP 742 S E + + + E +D + L DI + ++++ P Sbjct: 616 RFSKAYFSANPETPEETVSTPDSVESGEDGPVPDEDEKLSDINFWRKLVHDESLLTTDP 674 >UniRef50_C5LBZ9 DNA helicase, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LBZ9_9ALVE Length = 741 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 107/674 (15%), Positives = 228/674 (33%), Gaps = 34/674 (5%) Query: 38 GENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVAL 97 R+ A + G++ + + E + + + A+ Sbjct: 47 QRERMQALRSQDEEAYLRLLGESGNTRLARLIAQTTEFIERLGDRVLEQKKAAVAADDAV 106 Query: 98 REVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPH 157 + L+++L + ++ L + + + +R E S L G+ L + Sbjct: 107 DDTVLENQLEHMEEEEELGSSKHSLIQAKERYFRLTHTVQEHLTEQPSILAGRGRKLRDY 166 Query: 158 QLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLL-SGAAERVLIIVPETLQ-H 213 QL + + +LAD +GLGKT++ +L G +I+ P + Sbjct: 167 QLKGVEWLVSLFNNKLNGILADSMGLGKTVQTISLLAYLHEHKGIQGPHMIVAPLSTLRS 226 Query: 214 QWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFD-TEQLVICSLDFARRSKQRLEHLCE 271 W E R + L+D + + + Q+++ + + R KQ L + Sbjct: 227 NWEQEFERWLPSFKIVLYDGNKQQRKELRESEAYMLPFQVLLTTDAYVLRDKQY---LRK 283 Query: 272 AEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLL 331 W+ L+VDEAH L ++ S+ Q + + L LT TP Q ++ +A L L Sbjct: 284 FAWEYLIVDEAHRL---KNPKSKLVQVLNK-QYITKRRLALTGTPLQNDIQEVWALLNFL 339 Query: 332 DPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANS 391 P+ F + F + + + +E ++ + + + +L+ + Sbjct: 340 MPSIFDNSDSFHNWFAGSEGSEASGEEIW--ESIGEEEKLLVVDRLHKVLRPFVLRRDKN 397 Query: 392 DSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVS 451 + E + E + + + + + ++ R L + + ++ + Sbjct: 398 EVEAQLPKKTEQI-VWCEMTSSQKRMY-------TEIESRGLAHARGGSRKEDESPPEYI 449 Query: 452 GIMGARKSAEDRARDMLYPERIYQEFEGD-NATWWNFDPRVEWLMGYLTSHR--SQKVLV 508 + + + +P + + + + ++ L G L R +VL+ Sbjct: 450 SV--GQNLQMQLRKVCNHPYLFCHDSDLPIDESLIRICGKMMALDGILPKLRATGHRVLI 507 Query: 509 ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQ-VLLCSEIGS 567 LE L R R +R+R F ++ +L + G Sbjct: 508 FSQMTKLLNILELYLTFR-NFRYLRLDGSTGADDRERRIELFNSSNSNYFAFILSTRAGG 566 Query: 568 EGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHE 627 G N Q A +++FD +NP EQ R R+GQ +++ + + +++ E Sbjct: 567 LGINLQTADTVIIFDSDWNPQNDEQAQSRAHRLGQKSEVRTFRLITLNSVEEGMLQKAGE 626 Query: 628 GLDAFEHTCPTG---RTIYDSVYNDLINYLASPDQTEGFD-DLIKNCREQHEALKAQLEQ 683 +D G + L G + D I + A+ + Sbjct: 627 KMDQDALVIRHGMFNDRGNREAEAQRRDRLREALHNSGIEVDTIATDDYHLNQILARTPE 686 Query: 684 GRDRLLEIHSNGGE 697 D + + E Sbjct: 687 EFDFYEAVDARREE 700 >UniRef50_B9XEI0 Non-specific serine/threonine protein kinase n=1 Tax=bacterium Ellin514 RepID=B9XEI0_9BACT Length = 1046 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 103/617 (16%), Positives = 205/617 (33%), Gaps = 61/617 (9%) Query: 48 SPVTRVMFNPGDTITSHDGWQMQVE--EVKEENGLLTYIGTRLDTEESGVALREVFLDSK 105 + V R++ + +G ++ V+E +L D A +++ Sbjct: 482 ADVQRLLLSGQSHTRLKNGKYAIIDTGAVEELQEVLV------DASPQQHANGYRMSNAQ 535 Query: 106 LVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDV 165 F + R +G ++ + ++ L + L P+Q + Sbjct: 536 AGFLEATLRQQSG--WKVQAPTAWTQRAAQQRGDIKIEPPPLGELDSVLRPYQKEGVAWL 593 Query: 166 --GRRHAPRVLLADEVGLGKTIEAGMILHQQL-LSGAAERVLIIVPETLQHQWLVEMLRR 222 R + +LADE+GLGKT++ I++ L VL++ P +L W E + Sbjct: 594 QFLRDNGFGGILADEMGLGKTLQVLAIINALRSLKNLNAPVLVVCPTSLVFNWAAEAAKF 653 Query: 223 FN-LRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDE 281 LR + +H + + LVI S RR + L E+D +V+DE Sbjct: 654 TPELRVVALHGPQ----RHSLFAEISQKDLVITSYALLRRDAEHYRGL---EFDTVVLDE 706 Query: 282 AHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQ 341 A H+ ++ ++ QA++ + L+LT TP + + ++ L P Sbjct: 707 AQHI---KNRQTQNAQAVKSI--RTRRRLVLTGTPLENSVLDLWSIFDFLMPGYLGSAQD 761 Query: 342 FVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQ 401 F E + ++ + + + + +L+ + + Sbjct: 762 FKERYEAPIV---------------REKNLEVQKRLARRLRPFMLRRLKREVAKDLPEKI 806 Query: 402 ELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAE 461 E VS + + R L++ ++E+ + ++ ++ R+ Sbjct: 807 EQVSYC-ELNEGQRALYQQVLEA----SRKEIVNAVDANGLNKSRMVVLTALLRLRQICC 861 Query: 462 DRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS--HRSQKVLVICAKAATALQL 519 D E A +VE L +VLV L Sbjct: 862 DLRLLESKLE----------AKPSEPSGKVELFGELLEEVVDGGHRVLVFSQFTTMLGLL 911 Query: 520 EQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMV 579 + L E I +R + F + L+ + G G N A ++ Sbjct: 912 RERL-AAENIEFCYLDGATK--DRAQVVERFQRDSRIPVFLISLKAGGTGLNLTGADTVI 968 Query: 580 MFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTG 639 FD +NP + Q R RIGQ + + T + ++ F+ Sbjct: 969 HFDPWWNPAVEAQATDRAHRIGQKRVVTSYKLITRGTVEEKILNLQTRKRALFQGMLGGE 1028 Query: 640 RTIYDSVYNDLINYLAS 656 + +++ + I L + Sbjct: 1029 EQLAEALSWEEIQDLLT 1045 >UniRef50_B3RSE5 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RSE5_TRIAD Length = 1562 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 95/632 (15%), Positives = 200/632 (31%), Gaps = 69/632 (10%) Query: 134 KYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHA--PRVLLADEVGLGKTIEAGMIL 191 + + + L +QL+ + + ++LADE+GLGKTI+ L Sbjct: 394 RPKFVLLKSQPDYVGNSTHQLRDYQLDSLNWMIHAWCKENSIILADEMGLGKTIQVISFL 453 Query: 192 HQQLLSG-AAERVLIIVPETLQHQWLVEMLRR-FNLRFALFDDERYAEAQHDAY-----N 244 S L++VP + W E ++ ++ + + Y N Sbjct: 454 SYLYHSHSLYGIFLLVVPLSTMTSWQREFELWAPDINVVVYLGDTKSRRMIRDYDWYNSN 513 Query: 245 PFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAE 304 ++ + + + K + L +W L VDEAH L ++ S Y+ + + Sbjct: 514 KRFKFNALLTTYEIVLKDK---DILKSFKWACLAVDEAHRL---KNDDSLLYRYLMEF-- 565 Query: 305 HVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNK 364 LL+T TP Q ++ ++ L + R+ + +F + D + + + Sbjct: 566 KTDHRLLITGTPLQNSLKELWSLLHFIMEKRYDSWEKFKDSF----MKDDGSSYMSLHQE 621 Query: 365 LSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNG 424 L L + + + + + Q + + +++ ++ R+ ++ G Sbjct: 622 LQPYILRRVKKDVEKSLPAKVEQILR---VEMTAIQKQYYRWIITRN------YKALSKG 672 Query: 425 VKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATW 484 KG I + L A V + + + Sbjct: 673 AKGSLG-GFINIMMELKKCCNHASLVK--------------------MEEKNNKDAIQSL 711 Query: 485 WNFDPRVEWLMGYL--TSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIE 542 ++ L L +VL+ L + L+ + + Sbjct: 712 LRGSGKMILLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQIKH-FLFQRLDGSIRGDL 770 Query: 543 RDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIG 601 R +A F + + LL + G G N A +++FD +NP Q R RIG Sbjct: 771 RKQALDHFNADGSQDFCFLLSTRAGGLGLNLASADTVIIFDSDWNPQNDIQAQSRAHRIG 830 Query: 602 QAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTE 661 Q + + + ++ + + T +V L A Sbjct: 831 QRK---------QNSVEEEIIERATKKMVLDHLVIQRMDTSGRTV---LSKSSAPSSANF 878 Query: 662 GFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMN 721 +++ + E L + + +D+ L+ +A +SIE + ++ Sbjct: 879 TKEEVDVILKFGVEELFKETDGEQDKKLQEMDLDEILQRAETQSIESTKNTP--GMDLLS 936 Query: 722 LFDIIGINQDDRGDNMIVLTPSDHMLVPDFPG 753 F + ++ S P Sbjct: 937 SFKVASFAMEEELPIDEDEKQSARDWSDIVPS 968 >UniRef50_D1JIN1 Putative uncharacterized protein rapA n=1 Tax=uncultured archaeon RepID=D1JIN1_9ARCH Length = 1120 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 181/977 (18%), Positives = 349/977 (35%), Gaps = 99/977 (10%) Query: 72 EEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYR 131 EVK+ Y L S + D++L +D + F Sbjct: 16 AEVKKFERRAGYFLLELILRNSRTYKPLMISDAQLDQINVEDANTFAYTSNSEDFFFWIE 75 Query: 132 ARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAH-DVGRRHAPRVLLADEVGLGKTIEAGMI 190 A P + + +PHQ+ + R R L+AD+ G GKTI AG+I Sbjct: 76 ANILRLAYQFDPLLAVNVSQVDPLPHQIEAVYSYALRDPKIRFLIADDAGAGKTIMAGLI 135 Query: 191 LHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQ 250 + + + +LI+ P L++QW EM +F F L R + N ++T Sbjct: 136 IKELQYRNLVKNILIVAPGHLKYQWQREMKSKFGTNFTLV--NRSLMESNWGQNIWETHN 193 Query: 251 LVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHL--------VWSEDAPSREYQAIEQL 302 + S+DF ++ ++ L + WDL+VVDEAH + + ++ Y+ E L Sbjct: 194 CCVASIDFLKQD-DIIQKLRASSWDLVVVDEAHKMSAYGYKTRKGPKVEKTKRYKVGEIL 252 Query: 303 AEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQK------NYRPVADAV 356 +E +L LTATP + E+ L LL P F +E K R + + + Sbjct: 253 SEIATHMLFLTATPHRGDEENFRLFLDLLRPGFFSKTDLLMESIKKGENPLFVRRLKEDM 312 Query: 357 AMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRV 416 N + +N + + + + E L +A + ++ ++ S+ R Sbjct: 313 KDFKGNNLFTPRHVNTVNFPLTDDEKE-LYRAVTTYVKEYFDRAKDNRSITFAMMILQRR 371 Query: 417 LFRNTRNGVKGFPKRELHTIKL----PLPTQYQTAIKVSGIMGARKSAEDRARDMLYPER 472 L +T ++ R+ +L Q ++ I D A E+ Sbjct: 372 LTSSTHAILRSLENRKKRLDELMKLPDKIKQDTDYERLKHITEEELEDMDEADRWKIEEK 431 Query: 473 IYQEFEGDNATWWNFD--------------------PRVEWL-MGYLTSHRSQKVLVICA 511 + N + ++ L L++ K+L+ Sbjct: 432 LMHLTLAQNLDEVKAEIEQIEELIGFAETVKAREIESKLVKLRDDILSNIGDMKLLIFTE 491 Query: 512 KAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRN 571 T L L G + H M + R A F E Q+++ +E EG N Sbjct: 492 FRDTVDYLVAKLTS-WGYKVNTIHGSMGMDARIEAEHRFKNE---TQIMVATEAAGEGIN 547 Query: 572 FQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDA 631 QF S MV +D+P+NP+ LEQR+GR+ R GQ ++ I+ + T + ++ + L A Sbjct: 548 LQFCSLMVNYDIPWNPNRLEQRMGRIHRYGQDKEVFIYNMVSKDTREGQILDRLFDKLAA 607 Query: 632 FEHTCPT-------GRTIYDSVYNDLI-NYLASPDQTEGFDDLIKNCREQHEALKAQLEQ 683 + G I S ++I + + + E +L+++ LK ++EQ Sbjct: 608 MREALGSDRVFDVIGAVIPGSTLEEIIRDAITGQRRMEEIYELVEDIN--PAELKHKMEQ 665 Query: 684 G-RDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGD-NMIVLT 741 L H + + + E+ E + + + + F G GD I Sbjct: 666 IFMTSLATRHIDYAGITRNVQEADENRLMPEYIQDYFLRAFKRFGGEYKADGDIYRIKSI 725 Query: 742 PSD-------HMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSG 794 P + + + + ITFD+ A A +++ HPL+ + Sbjct: 726 PFELRKLNEAYDFQSRYGKVERRYAKITFDKAAAKAHASYEYVAPGHPLLEAVNQNAIDS 785 Query: 795 DTGSSTISLL-KNKALPVGTLLV---ELIYVVEAQAPKQL--------QLNRFLPPTPVR 842 + +++ + G + EL + A A K++ R + P+ + Sbjct: 786 MGHADAVAVFGDETNVMEGVVWFIESELTDGLGAIAGKRIFCVYQNMKGELRKINPSVIW 845 Query: 843 -------MLLDKNGNNL---AAQVEFETFNRQLNAVNRHTGSKLVNAVQ-------QDVH 885 ++L+++ + ++E + ++ + + + Sbjct: 846 DIAPADDVVLNESMKRMLNKKREIEEYVVTEIMFPYREEIEARRTKESEIKRKYGLRSLE 905 Query: 886 AILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQ 945 +LQ ++ + ++ + + + + E R L + D E+ +E Sbjct: 906 FLLQESNDKLLHYQQQELEEGK-DMNLAIFNERERKTDLDDKRKKLVD-EIE-LEKQLTV 962 Query: 946 VMESLDQAGWRLDALRL 962 ++ A + R+ Sbjct: 963 SEHNIIGAAVVIPMNRI 979 >UniRef50_Q8PWU7 SWF/SNF family helicase n=4 Tax=cellular organisms RepID=Q8PWU7_METMA Length = 1089 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 106/675 (15%), Positives = 210/675 (31%), Gaps = 88/675 (13%) Query: 17 LGLGTVVAVDARTVTLLFPST-GENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVK 75 L L +V+ D T E + A+ +P+ + G + +D Sbjct: 470 LTLDEIVSFDWEIALGDRVLTVRELQALAKLKAPLVKFR---GQWVEVND---------A 517 Query: 76 EENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKY 135 E L + + E S + ++ + + + Sbjct: 518 EIRAALEFWKKNPNGEASLREVLKLAVGVSEKADGVNVEGLNA------TGWIGELISRL 571 Query: 136 SSEQFRMPYSGLRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQ 193 + G +L P+Q + R+ LAD++GLGKT++ ++ Sbjct: 572 KDKTGFEELPAPNGFSGTLRPYQFRGYSWLAFLRQWGIGACLADDMGLGKTVQTLALIQH 631 Query: 194 QLL------------------------SGAAERVLIIVPETLQHQWLVEMLRRFNLRFAL 229 L A + VL++ P ++ + W E R + Sbjct: 632 DLEQAKEKAEEKIEEPAEEKIEEKVDGRKAPKPVLLVCPTSVINNWKKEASRFTPELSVM 691 Query: 230 FDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSE 289 + + + +VI S +R L+ L E W +V+DEA ++ + Sbjct: 692 VHHGTSRKKEEEFKKEAMNHAIVISSYGLVQRD---LKFLKEVHWAGVVLDEAQNI---K 745 Query: 290 DAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNY 349 + +++ +A L L LT TP + + ++ + L+P A F Sbjct: 746 NPETKQAKAARAL--ESDYRLALTGTPVENNVGDLWSIMEFLNPGFLGSQAGFKRNFFIP 803 Query: 350 RPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMD 409 + + L E+ G + L + S+ + + L Sbjct: 804 IQA-----------ERDQEAARRLKEITGPFILRRLKTDTSIISDLPEKMEMKTYCTL-- 850 Query: 410 RHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLY 469 L+ ++ + + + + Sbjct: 851 -TKEQASLYAAVLEDIRE--------------AIEGAEEGIQRKGIILSALSRLKQVCNH 895 Query: 470 PERIYQEFEGDNATWWNFDPRVEWLMGYLT--SHRSQKVLVICAKAATALQLEQVLRERE 527 P + ++ N+T ++ L L +K LV A +++ L+ Sbjct: 896 PAQFLKD----NSTIPGRSGKLARLTEMLDVVLENGEKALVFTQFAEMGKMVKEHLQASF 951 Query: 528 GIRAAVFHEGMSIIERDRAAAWFAEEDTG-AQVLLCSEIGSEGRNFQFASHMVMFDLPFN 586 G H G+ +RDR F E +L + G G N A+H+ FD +N Sbjct: 952 GCEVLFLHGGVPRKQRDRMLERFQEGKEYLPIFVLSLKAGGTGLNLTGANHVFHFDRWWN 1011 Query: 587 PDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSV 646 P + Q R RIGQ ++++H T + + + E+ TG + Sbjct: 1012 PAVENQATDRAFRIGQKKNVEVHKFICAGTLEEKIDEIIERKVQVAENVVGTGEDWLTEL 1071 Query: 647 YNDLINYLASPDQTE 661 ND + + + + Sbjct: 1072 SNDELKDILALREEA 1086 >UniRef50_UPI0000D56DCA PREDICTED: similar to helicase n=3 Tax=Neoptera RepID=UPI0000D56DCA Length = 871 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 77/525 (14%), Positives = 169/525 (32%), Gaps = 42/525 (8%) Query: 147 LRGQRTSLIPHQLNIAHDV--GRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAE-RV 203 + L +Q+ + + +LADE+GLGKT++ L + A+ Sbjct: 316 ILSVSLRLTNYQMVGLNWLAVLHAQRVNGILADEMGLGKTVQVIAFLAYLKETFQAQNTH 375 Query: 204 LIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDT-----EQLVICSLDF 258 L++VP + W E R + +F E + F +++ + Sbjct: 376 LVVVPSSTLDNWRSEFARWC-PQLRVFMYYGSTEERRGFRVDFAKGILADFDVILTTYSL 434 Query: 259 ARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQ 318 S + + ++ DEAH L ++ ++ Y+ + ++ + +LLT TP Q Sbjct: 435 VGNSPEERKMFRVTPMHYVIFDEAHML---KNMNTQRYENLIRI--NAKHRILLTGTPLQ 489 Query: 319 LGMESHFARLRLLDPNRFH----DFAQFVEEQKNYRPVADAVAMLLAG------NKLSND 368 + + L + P F D ++ + D + + Sbjct: 490 NNLLELMSLLIFVMPKMFAEKTEDLKSLFQKTSKSKQTDDTLPPFEREQIEQAKRIMKPF 549 Query: 369 ELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGF 428 L L + + + + Q + E + N + + Sbjct: 550 VLRRLKCDVLQDLPKKIDHVMKVPMAPTQKEQYEALVASYQNAAVEEESAYNGMSIMTDL 609 Query: 429 PKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIY-------------- 474 K H + L +++ ++ + +D + + + ++ Sbjct: 610 RKLSNHPLLLRYHYDEHQIREMAKLLVRDPTYKDTVEEYIVQDLLFMSDFEINKLTKIHR 669 Query: 475 -QEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRA 531 E + +L L + +VL+ +E L+ R+ + Sbjct: 670 CLERYMLPDNLILTSGKFLYLDKILAELKQNGHRVLIFSQYVIMLNVMEDYLKIRK-HKY 728 Query: 532 AVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLE 591 + ER + +++ LL + G G N A +++ D+ FNP + Sbjct: 729 LRMDGSTPVNERQDLVDEYMGDNSIFIFLLSTRAGGLGINLTSADTVIIHDIDFNPYNDK 788 Query: 592 QRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTC 636 Q R R+GQ + ++ + T + ++ E L Sbjct: 789 QAEDRCHRMGQTRPVTVYRLVSQGTIEEGMLEMNKEKLKLERQIT 833 >UniRef50_Q5KBX3 Transcription regulator, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KBX3_CRYNE Length = 1519 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 95/610 (15%), Positives = 188/610 (30%), Gaps = 72/610 (11%) Query: 134 KYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRH--APRVLLADEVGLGKTIEAGMIL 191 + + ++ L L P QL + + +LADE+GLGKT+++ L Sbjct: 438 RPTYQKIPENPPYLACGGA-LKPFQLTGLNWLAYVWSKGENGILADEMGLGKTVQSVSFL 496 Query: 192 HQQLL-SGAAERVLIIVPETLQHQWLVEMLRRFN-LRFALFDDERYAEAQHDAYNPFD-- 247 L++VP + W + R L + + + Sbjct: 497 SYLFHVQHQYGPFLVVVPLSTISAWQAQFKRWAPELNVICYMGSARSRDVIRQFEFGPLK 556 Query: 248 --TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEH 305 +++ + +F + + + L + +W +L VDEAH L ++ S+ Y+A++ Sbjct: 557 NLKFNVLLTTYEFILKDR---QDLQQIKWQVLAVDEAHRL---KNHESQLYEALKSFWSA 610 Query: 306 VPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKL 365 LL+T TP Q ++ A + L P +F F + ++ Sbjct: 611 S--KLLITGTPLQNNVKELLALMHFLMPEKFQLANDF-----DLNDASEDQGA------- 656 Query: 366 SNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGV 425 + + ++ +L+ D + E + ++ ++N Sbjct: 657 -------KIKDLHDKLTTLMLRRLKKDVVKELPTKSERILR-VEMSAMQTHYYKNILTKN 708 Query: 426 ------KGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEG 479 G + L + + L G E + Sbjct: 709 FAVLSKGGTQQVSLMNVAMELKKASNHPYLFEGA-----------------EDRSKPANE 751 Query: 480 DNATWWNFDPRVEWLMGYLTSHR--SQKVLVICAKAATALQLEQVLREREGIRAAVFHEG 537 ++ L L+ + +VL+ + + R G Sbjct: 752 ILRGLVMNSGKMVCLDMLLSRLKSDGHRVLIFSQMVRLLDIISDYMTAR-GYVHQRLDGT 810 Query: 538 MSIIERDRAAAWFAEEDTGAQ-VLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGR 596 + R ++ F + LL + G G N + A +++FD +NP Q + R Sbjct: 811 VPSDVRKKSIEHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIFDSDYNPQNDLQAMAR 870 Query: 597 LDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGL----DAFEHTCPTGRTIYDSVYNDLIN 652 RIGQ + I + T + ++ + TG I S N Sbjct: 871 AHRIGQQRHVSIFRLVSKGTIEEDILERAMRKMLLEYAIINKMDTTGAHINGSSTPKDKN 930 Query: 653 YLASPDQTEGFDDLIKNC---REQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQ 709 S ++ + K E D +L +++ + A A Sbjct: 931 VDLSKEELSAILKFGARNMFKTDDSTQNKKLDEMNLDDIL-NNADAFDTESAAAPGTTSL 989 Query: 710 DDDTNLIAFA 719 + L FA Sbjct: 990 GGEGFLSQFA 999 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.150 0.446 Lambda K H 0.267 0.0460 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,188,979,254 Number of Sequences: 3077464 Number of extensions: 248868828 Number of successful extensions: 953350 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 7358 Number of HSP's successfully gapped in prelim test: 8279 Number of HSP's that attempted gapping in prelim test: 879141 Number of HSP's gapped (non-prelim): 44218 length of query: 968 length of database: 1,040,396,356 effective HSP length: 139 effective length of query: 829 effective length of database: 612,628,860 effective search space: 507869324940 effective search space used: 507869324940 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 99 (42.6 bits)