46 c1s2mA_ Probab=99.90   E-value=2.2e-20  Score=146.03  Aligned_columns=334  Identities=16%

Q ss_pred             CCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHH-HHHHHHHHHCCCCCCEEEEEC-HHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             57506899999998357998799604788358999-999999998189996899827-4478999999998669982999
Q batch____       153 SLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEA-GMILHQQLLSGAAERVLIIVP-ETLQHQWLVEMLRRFNLRFALF  230 (968)
Q Consensus       153 ~l~phQ~~~~~~~~~~~~~r~lLADevGLGKTi~a-~~~l~~~~~~~~~~~~Liv~P-~sL~~qW~~E~~~~f~~~~~~~  230 (968)
                      .|.|+|.+++.++++  +..+++.=..|-|||+-+ +.++..+.......+++|||| ..|..||...+.+.+.......
T Consensus        23 ~~~~~Q~~ai~~il~--~~~vii~apTGsGKT~~~~l~~l~~l~~~~~~~~~iii~p~~~l~~q~~~~~~~l~~~~~~~~  100 (377)
T c1s2mA_          23 KPSPIQEEAIPVAIT--GRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISC  100 (377)
T ss_dssp             SCCHHHHHHHHHHHH--TCCEEEECCTTSCHHHHHHHHHHHHCCTTSCSCCEEEECSSHHHHHHHHHHHHHHTTTTTCCE
T ss_pred             CCCHHHHHHHHHHHC--CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf             879899999999975--998999927998678999999999985046882899984738987999999999731037715


Q ss_pred             ECCCHHHHHHHHHHHHCCCCEEEECHHHHHCCHHHHHHHHCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEE
Q ss_conf             53530466655553201298899967799449998976402698788500553002768578999999986431067079
Q batch____       231 DDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVL  310 (968)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~vi~s~~~l~~~~~~~~~l~~~~wd~vIvDEAH~lkn~~~~~s~~~~~~~~l~~~~~~~l  310 (968)
                      .....................++........+...........++.+++||.|.+  ......................+
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  178 (377)
T c1s2mA_         101 MVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKM--LSRDFKTIIEQILSFLPPTHQSL  178 (377)
T ss_dssp             EEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHTTCSCCTTCCEEEEESHHHH--SSHHHHHHHHHHHTTSCSSCEEE
T ss_pred             EEEEECCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCEEEEEEECCCEEE--CCCCCCHHHHHHHHHCCCCCEEE
T ss_conf             9998178737877752035750232038887643200000110002220220244--13322102345664114575056


Q ss_pred             ECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
Q ss_conf             70366435998899999988497867998899999753565578887531002356999999998546643346764133
Q batch____       311 LLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAAN  390 (968)
Q Consensus       311 lLTgTP~~n~~~e~~~ll~~l~p~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (968)
                      ..++|..                                                                         
T Consensus       179 ~~~~~~~-------------------------------------------------------------------------  185 (377)
T c1s2mA_         179 LFSATFP-------------------------------------------------------------------------  185 (377)
T ss_dssp             EEESCCC-------------------------------------------------------------------------
T ss_pred             EECCCCC-------------------------------------------------------------------------
T ss_conf             3112122-------------------------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCH
Q ss_conf             78886227799999999963236899999999999888998850220146587884201011112367565325651895
Q batch____       391 SDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYP  470 (968)
Q Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  470 (968)
                                                                                  ....................
T Consensus       186 ------------------------------------------------------------~~~~~~~~~~~~~~~~~~~~  205 (377)
T c1s2mA_         186 ------------------------------------------------------------LTVKEFMVKHLHKPYEINLM  205 (377)
T ss_dssp             ------------------------------------------------------------HHHHHHHHHHCSSCEEESCC
T ss_pred             ------------------------------------------------------------CHHHHHHHHCCCCCCEEEEE
T ss_conf             ------------------------------------------------------------00246665215665147640


Q ss_pred             HHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
Q ss_conf             66111002441123102858899999998632995465103289999999999873798399971899989999999986
Q batch____       471 ERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF  550 (968)
Q Consensus       471 ~~~~~~~~~~~~~~~~~~~k~~~l~~~l~~~~~~kviif~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~R~~~~~~F  550 (968)
                      ...................+...+..........+.++|+........+....... +.....++++++..++......|
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  284 (377)
T c1s2mA_         206 EELTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDL-GYSCYYSHARMKQQERNKVFHEF  284 (377)
T ss_dssp             SSCBCTTEEEEEEECCGGGHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHH-TCCEEEECTTSCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHC-CCCCCCCCCCCCHHHHHCCCCCC
T ss_conf             13565552599997060355678874200134522688623011246778754210-13322224564201210000001


Q ss_pred             HCCCCCEEEEEECCHHCCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             22899639999831220385334458889828988987999988769864887842899988539838999999986520
Q batch____       551 AEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLD  630 (968)
Q Consensus       551 ~~~~~~~~~Lis~~~gg~GlNLq~a~~vi~~D~~wnP~~~eQrigR~~RiGQ~~~V~v~~l~~~~t~ee~~~~~l~~~~~  630 (968)
                      ..+...  +++||++.+.|+|+..+++||+||+|+|+...-|++||+-|.|++  ..+|.++..+  |...++.+.+.++
T Consensus       285 ~~~~~~--vlv~T~~~~~GiDip~v~~VI~~~~p~s~~~~~Qr~GRagR~g~~--g~~i~~~~~~--d~~~~~~i~~~l~  358 (377)
T c1s2mA_         285 RQGKVR--TLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL--GLAINLINWN--DRFNLYKIEQELG  358 (377)
T ss_dssp             HTTSSS--EEEESSCSSSSCCCTTEEEEEESSCCSSHHHHHHHHCBSSCTTCC--EEEEEEECGG--GHHHHHHHHHHHT
T ss_pred             CCCCEE--EEEECCCHHCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCC--EEEEEEECHH--HHHHHHHHHHHHC
T ss_conf             122113--431023011235646763899808887998998862102368882--5999987888--9999999999938