BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (382 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q56886 Flagellar biosynthetic protein flhB n=153 Tax=ce... 497 e-139 UniRef50_Q2NX25 Flagellar biosynthetic protein FlhB n=7 Tax=Ente... 378 e-103 UniRef50_B2T7B1 Flagellar biosynthetic protein FlhB n=18 Tax=Bur... 366 e-99 UniRef50_Q46PH4 Flagellar biosynthetic protein FlhB n=1 Tax=Rals... 360 4e-98 UniRef50_A6SZT0 FlhB flagellar biosynthetic protein n=14 Tax=Bet... 350 5e-95 UniRef50_P57334 Flagellar biosynthetic protein flhB n=4 Tax=Buch... 329 1e-88 UniRef50_C1D4I4 FlhB1 n=1 Tax=Laribacter hongkongensis HLHK9 Rep... 326 9e-88 UniRef50_Q3JY73 Flagellar biosynthetic protein FlhB n=61 Tax=cel... 322 2e-86 UniRef50_B9Z6P8 Flagellar biosynthetic protein FlhB n=1 Tax=Luti... 318 2e-85 UniRef50_B8GQZ9 Flagellar biosynthetic protein FlhB n=8 Tax=Gamm... 318 3e-85 UniRef50_Q2SBX1 Flagellar biosynthesis pathway, component FlhB n... 317 4e-85 UniRef50_Q2Y9F9 Flagellar biosynthetic protein FlhB n=2 Tax=Beta... 315 2e-84 UniRef50_Q31HN4 Flagellar biosynthetic protein FlhB n=1 Tax=Thio... 313 6e-84 UniRef50_B2UHW8 Flagellar biosynthetic protein FlhB n=6 Tax=Rals... 310 7e-83 UniRef50_Q47I36 Flagellar biosynthetic protein FlhB n=1 Tax=Dech... 307 5e-82 UniRef50_Q3V7G4 Flagellar biosynthetic protein flhB n=2 Tax=Prot... 301 3e-80 UniRef50_Q8D3G7 FlhB protein n=1 Tax=Wigglesworthia glossinidia ... 300 4e-80 UniRef50_A6GUU4 Flagellar biosynthetic protein FlhB n=1 Tax=Limn... 298 2e-79 UniRef50_C6NWP2 Flagellar biosynthesis protein FlhB n=2 Tax=Prot... 296 9e-79 UniRef50_A1WUA6 Flagellar biosynthetic protein FlhB n=3 Tax=Gamm... 296 1e-78 UniRef50_A6W0V5 Flagellar biosynthetic protein FlhB n=2 Tax=Mari... 295 1e-78 UniRef50_Q3J977 Flagellar biosynthetic protein FlhB n=3 Tax=Gamm... 283 8e-75 UniRef50_Q085L7 Flagellar biosynthetic protein FlhB n=70 Tax=Gam... 282 2e-74 UniRef50_B9ZRA6 Flagellar biosynthetic protein FlhB n=1 Tax=Thio... 280 7e-74 UniRef50_Q3V867 Flagellar biosynthetic protein FlhB n=5 Tax=Legi... 275 2e-72 UniRef50_Q1I766 Flagellar biosynthetic protein FlhB n=22 Tax=Gam... 275 2e-72 UniRef50_B8EA03 Flagellar biosynthetic protein FlhB n=22 Tax=Gam... 275 3e-72 UniRef50_C5S862 Flagellar biosynthetic protein FlhB n=1 Tax=Allo... 273 6e-72 UniRef50_C3K0I5 Putative flagellar biosynthesis-related protein ... 271 3e-71 UniRef50_A1VY54 Flagellar biosynthetic protein FlhB n=27 Tax=Eps... 268 2e-70 UniRef50_A0L3J7 Flagellar biosynthetic protein FlhB n=1 Tax=Magn... 267 5e-70 UniRef50_Q1NP88 Flagellar biosynthetic protein FlhB n=2 Tax=Delt... 266 7e-70 UniRef50_A0Z390 Flagellar biosynthetic protein FlhB n=3 Tax=uncl... 264 4e-69 UniRef50_B8FK32 Flagellar biosynthetic protein FlhB n=4 Tax=Bact... 260 6e-68 UniRef50_D0KYP0 Flagellar biosynthetic protein FlhB n=1 Tax=Halo... 260 6e-68 UniRef50_D0I461 Flagellar biosynthesis protein FlhB n=2 Tax=Vibr... 258 4e-67 UniRef50_A2SKE1 Flagellar biosynthesis protein n=2 Tax=Burkholde... 256 7e-67 UniRef50_B4RUM4 Flagellar biosynthesis protein n=3 Tax=Alteromon... 256 8e-67 UniRef50_B2SN53 Flagellar biosynthetic protein FlhB n=14 Tax=Xan... 256 8e-67 UniRef50_B1HQX6 Flagellar biosynthetic protein n=17 Tax=Bacillac... 256 1e-66 UniRef50_B0TNN8 Flagellar biosynthetic protein FlhB n=7 Tax=Shew... 256 1e-66 UniRef50_A6F9S1 Flagellar biosynthetic protein n=1 Tax=Moritella... 256 1e-66 UniRef50_P35538 Flagellar biosynthetic protein flhB n=10 Tax=Bac... 254 4e-66 UniRef50_Q89AN6 Flagellar biosynthetic protein flhB n=1 Tax=Buch... 254 5e-66 UniRef50_Q2LT07 Flagellar biosynthesis pathway component n=1 Tax... 253 1e-65 UniRef50_C4G684 Putative uncharacterized protein n=1 Tax=Abiotro... 247 6e-64 UniRef50_B1LC25 Flagellar biosynthetic protein FlhB n=6 Tax=Ther... 246 1e-63 UniRef50_A3DCP3 Flagellar biosynthetic protein FlhB n=14 Tax=Clo... 243 8e-63 UniRef50_D0IYF3 Type III secretion exporter n=11 Tax=Comamonadac... 242 1e-62 UniRef50_A8TPM3 Flagellar biosynthesis protein B n=1 Tax=alpha p... 242 2e-62 UniRef50_Q1YV76 Flagellar biosynthetic protein FlhB n=1 Tax=gamm... 241 4e-62 UniRef50_Q0AYL8 Flagellar biosynthesis/type III secretory pathwa... 241 5e-62 UniRef50_C0ZF82 Flagellar biosynthetic protein FlhB n=4 Tax=Paen... 240 6e-62 UniRef50_A7K1M6 Flagellar biosynthesis protein FlhB n=13 Tax=Vib... 239 1e-61 UniRef50_C9PBY4 Flagellar biosynthesis protein FlhB n=4 Tax=Vibr... 238 2e-61 UniRef50_Q2W9Q2 Flagellar biosynthesis pathway n=3 Tax=Magnetosp... 238 2e-61 UniRef50_C9LSQ5 Flagellar biosynthetic protein FlhB n=1 Tax=Sele... 238 4e-61 UniRef50_B5YIY9 Flagellar biosynthetic protein FlhB n=1 Tax=Ther... 237 6e-61 UniRef50_Q0EZ55 Flagellar biosynthesis protein n=1 Tax=Mariprofu... 234 4e-60 UniRef50_B8CVM2 Flagellar biosynthetic protein FlhB n=1 Tax=Shew... 234 4e-60 UniRef50_B9Z4S0 Type III secretion exporter n=1 Tax=Lutiella nit... 234 5e-60 UniRef50_A1HN21 Flagellar biosynthetic protein FlhB n=2 Tax=Veil... 233 6e-60 UniRef50_B6IS89 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 233 9e-60 UniRef50_UPI0001BCCDC9 flagellar biosynthesis/type III secretory... 233 1e-59 UniRef50_D1B6A6 Flagellar biosynthetic protein FlhB n=1 Tax=Ther... 232 2e-59 UniRef50_A8MHF6 Flagellar biosynthetic protein FlhB n=2 Tax=Alka... 232 2e-59 UniRef50_Q3A5E5 Flagellar biosynthetic protein FlhB n=3 Tax=Delt... 231 2e-59 UniRef50_C0QA53 FlhB2 n=1 Tax=Desulfobacterium autotrophicum HRM... 231 4e-59 UniRef50_C5SN70 Flagellar biosynthetic protein FlhB n=1 Tax=Asti... 231 4e-59 UniRef50_A5I580 Flagellar biosynthetic protein n=19 Tax=Bacteria... 230 6e-59 UniRef50_B2A365 Flagellar biosynthetic protein FlhB n=3 Tax=Bact... 230 7e-59 UniRef50_Q5DY36 Lateral flagellar export/assembly protein (FlhB-... 229 1e-58 UniRef50_Q0ANB5 Flagellar biosynthetic protein FlhB n=3 Tax=Hyph... 228 2e-58 UniRef50_C1DW37 Flagellar biosynthetic protein FlhB n=3 Tax=Sulf... 228 3e-58 UniRef50_B9L5B0 Flagellar biosynthetic protein FlhB n=2 Tax=Ther... 228 3e-58 UniRef50_C1SNG6 Flagellar biosynthetic protein FlhB n=1 Tax=Deni... 228 4e-58 UniRef50_A1T0L4 Flagellar biosynthetic protein FlhB n=1 Tax=Psyc... 228 4e-58 UniRef50_A7HWA1 Flagellar biosynthetic protein FlhB n=9 Tax=Alph... 227 4e-58 UniRef50_B8CYQ0 Flagellar biosynthetic protein FlhB n=1 Tax=Halo... 227 5e-58 UniRef50_A9BHY6 Flagellar biosynthetic protein FlhB n=1 Tax=Petr... 227 5e-58 UniRef50_A4Y0Q6 Flagellar biosynthetic protein FlhB n=1 Tax=Pseu... 227 7e-58 UniRef50_B1K3A0 Type III secretion exporter n=13 Tax=Betaproteob... 226 8e-58 UniRef50_A4SI11 Lateral flagellar biosynthetic protein, LfhB n=2... 225 2e-57 UniRef50_B4U884 Flagellar biosynthetic protein FlhB n=3 Tax=Bact... 225 3e-57 UniRef50_A5D0H9 Flagellar biosynthesis pathway, component FlhB n... 224 5e-57 UniRef50_UPI0001C3562E flagellar biosynthesis protein FlhB n=1 T... 223 7e-57 UniRef50_A6M184 Flagellar biosynthetic protein FlhB n=4 Tax=Bact... 223 9e-57 UniRef50_Q5FQT1 Flagellar biosynthetic protein FlhB n=1 Tax=Gluc... 221 3e-56 UniRef50_A6Q2P0 Flagellar biosynthetic protein FlhB n=2 Tax=Bact... 221 3e-56 UniRef50_C9XJ38 Flagellar export protein n=7 Tax=Bacteria RepID=... 221 3e-56 UniRef50_Q3ADC9 Flagellar biosynthetic protein FlhB n=2 Tax=Bact... 221 4e-56 UniRef50_Q6MI50 Flagella-associated protein n=1 Tax=Bdellovibrio... 221 4e-56 UniRef50_C0C1N4 Putative uncharacterized protein n=1 Tax=Clostri... 221 4e-56 UniRef50_A6D5X3 Flagellar biosynthetic protein n=4 Tax=Gammaprot... 220 7e-56 UniRef50_A9KNE0 Flagellar biosynthetic protein FlhB n=1 Tax=Clos... 218 2e-55 UniRef50_B0MPC8 Putative uncharacterized protein n=1 Tax=Eubacte... 218 3e-55 UniRef50_A7FED7 Flagellar biosynthetic protein FlhB n=25 Tax=Ent... 218 3e-55 UniRef50_A4YXU5 Flagellar biosynthetic protein FlhB n=12 Tax=Bra... 218 4e-55 UniRef50_C5EFG7 Flagellar export protein n=3 Tax=Clostridiales R... 218 4e-55 UniRef50_D2S977 Type III secretion exporter n=1 Tax=Geodermatoph... 216 7e-55 UniRef50_C6WJP3 Type III secretion exporter n=1 Tax=Actinosynnem... 216 1e-54 UniRef50_B8J3L1 Flagellar biosynthetic protein FlhB n=5 Tax=Desu... 216 1e-54 UniRef50_C8W1H2 Flagellar biosynthetic protein FlhB n=1 Tax=Desu... 215 2e-54 UniRef50_A8EW41 Flagellar biosynthetic protein FlhB n=1 Tax=Arco... 215 2e-54 UniRef50_B0THC3 Flagellar biosynthetic protein flhb, putative n=... 214 5e-54 UniRef50_UPI00016C3B58 flagellar biosynthesis protein FlhB n=1 T... 213 8e-54 UniRef50_Q1Q6S5 Similar to flagellar biosynthetic protein FlhB n... 213 1e-53 UniRef50_C6HWM0 Flagellar biosynthetic protein FlhB n=1 Tax=Lept... 213 1e-53 UniRef50_C4ZAM8 Flagellar biosynthesis/type III secretory pathwa... 213 1e-53 UniRef50_A4J750 Flagellar biosynthetic protein FlhB n=1 Tax=Desu... 213 1e-53 UniRef50_D0XSL6 Flagellar biosynthetic protein FlhB n=1 Tax=Brev... 212 2e-53 UniRef50_C1ZJL2 Flagellar biosynthetic protein FlhB n=1 Tax=Plan... 212 2e-53 UniRef50_A8F4V6 Flagellar biosynthetic protein FlhB n=1 Tax=Ther... 212 2e-53 UniRef50_B8FTQ2 Flagellar biosynthetic protein FlhB n=2 Tax=Desu... 211 4e-53 UniRef50_Q1D9K3 FlhB/HrpN/YscU/SpaS family protein n=3 Tax=Cysto... 211 5e-53 UniRef50_Q97H65 FliR/FlhB fusion protein n=1 Tax=Clostridium ace... 211 5e-53 UniRef50_Q67K27 Flagellar biosynthesis protein n=1 Tax=Symbiobac... 209 2e-52 UniRef50_Q2RKD2 Flagellar biosynthetic protein FlhB n=5 Tax=Bact... 209 2e-52 UniRef50_C1F996 Flagellar biosynthetic protein FlhB n=1 Tax=Acid... 207 7e-52 UniRef50_B1I5J8 Flagellar biosynthetic protein FlhB n=1 Tax=Cand... 207 8e-52 UniRef50_B2TLW3 Flagellar biosynthetic protein FliR/FlhB n=6 Tax... 206 2e-51 UniRef50_A7HLM7 Flagellar biosynthetic protein FlhB n=3 Tax=Ther... 205 2e-51 UniRef50_C8WYW8 Flagellar biosynthetic protein FlhB n=1 Tax=Desu... 205 2e-51 UniRef50_C8WWG5 Flagellar biosynthetic protein FlhB n=2 Tax=Alic... 205 3e-51 UniRef50_B6IQA2 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 205 3e-51 UniRef50_B3EAW0 Flagellar biosynthetic protein FlhB n=8 Tax=Desu... 204 4e-51 UniRef50_C5RFV5 Flagellar biosynthetic protein FlhB n=1 Tax=Clos... 202 2e-50 UniRef50_A5V2R9 Type III secretion exporter n=2 Tax=Sphingomonad... 202 2e-50 UniRef50_A4XIZ4 Flagellar biosynthetic protein FlhB n=2 Tax=Clos... 201 3e-50 UniRef50_A3V235 Flagellar protein FlhB n=2 Tax=Rhodobacterales R... 201 3e-50 UniRef50_C6NYG2 Flagellar biosynthesis protein FlhB n=1 Tax=Acid... 201 3e-50 UniRef50_C6MMA1 Flagellar biosynthetic protein FlhB n=1 Tax=Geob... 201 4e-50 UniRef50_B6AMB2 Flagellar biosynthesis protein, FlhB n=1 Tax=Lep... 201 4e-50 UniRef50_O54243 Flagellar biosynthetic protein flhB n=46 Tax=Rhi... 200 6e-50 UniRef50_A8U5W0 Flagellar biosynthesis protein B n=1 Tax=Carnoba... 200 7e-50 UniRef50_Q0FML8 Flagellar biosynthesis protein B n=4 Tax=Rhodoba... 200 8e-50 UniRef50_Q316G6 Flagellar biosynthetic protein FlhB n=7 Tax=Desu... 200 9e-50 UniRef50_C0GJG3 Type III secretion exporter n=1 Tax=Dethiobacter... 199 1e-49 UniRef50_Q7UXG2 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 199 1e-49 UniRef50_D1BCL3 Flagellar biosynthesis pathway, component FlhB n... 199 1e-49 UniRef50_C0AUZ3 Putative uncharacterized protein n=1 Tax=Proteus... 199 1e-49 UniRef50_UPI0001C312BE flagellar biosynthetic protein FlhB n=1 T... 199 2e-49 UniRef50_B9KJE4 Flagellar biosynthetic protein FlhB n=7 Tax=Rhod... 198 3e-49 UniRef50_Q12T86 Type III secretion exporter n=1 Tax=Shewanella d... 198 3e-49 UniRef50_A6W8L6 Type III secretion exporter n=1 Tax=Kineococcus ... 198 3e-49 UniRef50_Q2RQH7 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 198 3e-49 UniRef50_A8IPK5 Flagellar biosynthetic protein n=14 Tax=Alphapro... 198 3e-49 UniRef50_C8WBS8 Type III secretion exporter n=3 Tax=Zymomonas mo... 197 5e-49 UniRef50_C2KTQ0 Flagellar biosynthesis protein FlhB n=3 Tax=Mobi... 197 5e-49 UniRef50_O67813 Flagellar biosynthetic protein flhB n=1 Tax=Aqui... 197 5e-49 UniRef50_D2R543 Type III secretion exporter n=3 Tax=Bacteria Rep... 197 6e-49 UniRef50_Q01PP8 Type III secretion exporter n=1 Tax=Candidatus S... 197 6e-49 UniRef50_C2ED97 Flagellar biosynthesis protein FlhB n=5 Tax=Lact... 197 7e-49 UniRef50_C2KYZ7 Flagellar biosynthesis protein FlhB n=1 Tax=Orib... 197 7e-49 UniRef50_A1SEN0 Type III secretion exporter n=1 Tax=Nocardioides... 195 2e-48 UniRef50_Q1NGK4 Flagellar biosynthetic protein n=1 Tax=Sphingomo... 194 3e-48 UniRef50_B8H3H7 Flagellar biosynthesis protein FlhB n=6 Tax=Caul... 192 1e-47 UniRef50_B1LWT8 Flagellar biosynthetic protein FlhB n=8 Tax=Meth... 189 1e-46 UniRef50_C4XT81 Flagellar biosynthetic protein FlhB n=1 Tax=Desu... 189 1e-46 UniRef50_Q0G102 Flagellar biosynthesis protein B n=3 Tax=Rhizobi... 189 2e-46 UniRef50_Q1GCC9 Flagellar biosynthetic protein flhB n=3 Tax=Rhod... 189 2e-46 UniRef50_Q2SH55 Type III secretory pathway, component EscU n=1 T... 188 3e-46 UniRef50_C5CXN4 Type III secretion exporter n=1 Tax=Variovorax p... 187 5e-46 UniRef50_UPI0001744A09 Type III secretory pathway, component Esc... 187 5e-46 UniRef50_A3SFT1 Flagella-associated protein n=2 Tax=Sulfitobacte... 187 6e-46 UniRef50_Q4JMS7 Predicted flagellar biosynthetic protein n=1 Tax... 185 2e-45 UniRef50_A4SKN0 Flagellar biosynthetic protein FlhB n=1 Tax=Aero... 185 2e-45 UniRef50_C4Z5H8 Flagellar biosynthetic protein FlhB n=5 Tax=Bact... 185 3e-45 UniRef50_D0DA90 Flagellar biosynthetic protein FlhB n=1 Tax=Citr... 184 5e-45 UniRef50_D2NZE2 Flagellar biosynthesis protein FlhB n=21 Tax=Lis... 183 1e-44 UniRef50_A9HH78 Putative flagellar biosynthetic protein flhB n=1... 183 1e-44 UniRef50_Q9ZL73 Flagellar biosynthetic protein flhB n=16 Tax=Hel... 182 1e-44 UniRef50_Q2P9D1 HrcU protein n=12 Tax=Xanthomonas RepID=Q2P9D1_X... 181 3e-44 UniRef50_C6XFL0 Flagellar biosynthesis protein FlhB n=1 Tax=Cand... 181 4e-44 UniRef50_Q2RZE8 Flagellar biosynthetic protein flhB n=1 Tax=Sali... 180 9e-44 UniRef50_C3XFW9 Flagellar biosynthesis protein FlhB n=3 Tax=Heli... 179 1e-43 UniRef50_A1UTV9 Flagellar biosynthetic protein FlhB n=1 Tax=Bart... 179 1e-43 UniRef50_B1ZR29 Type III secretion exporter n=1 Tax=Opitutus ter... 179 2e-43 UniRef50_C7R0I2 Type III secretion exporter n=1 Tax=Jonesia deni... 179 2e-43 UniRef50_B3PPK9 Flagellar biosynthesis transmembrane protein n=1... 178 3e-43 UniRef50_B7QTP8 Type III secretion exporter n=1 Tax=Ruegeria sp.... 177 5e-43 UniRef50_A0LT73 Type III secretion exporter n=1 Tax=Acidothermus... 177 5e-43 UniRef50_C1A547 Flagellar biosynthesis protein FlhB n=1 Tax=Gemm... 176 1e-42 UniRef50_B6QWX7 Translocation protein in type III secretion n=2 ... 174 5e-42 UniRef50_C6QF02 Type III secretion exporter n=1 Tax=Hyphomicrobi... 173 8e-42 UniRef50_B2IK02 Flagellar biosynthetic protein FlhB n=1 Tax=Beij... 173 9e-42 UniRef50_A0RCA2 Flagellar biosynthetic protein n=72 Tax=Bacillus... 172 3e-41 UniRef50_Q2SEX3 Flagellar biosynthesis pathway, component FlhB n... 171 3e-41 UniRef50_D0MGA4 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 171 4e-41 UniRef50_C6N718 Putative flagellar biosynthetic protein FlhB n=1... 169 2e-40 UniRef50_P69986 Yop proteins translocation protein U n=49 Tax=Ga... 168 2e-40 UniRef50_C0QXX4 Flagellar biosynthesis protein FlhB n=2 Tax=Brac... 168 3e-40 UniRef50_A5P6J3 Type III secretion exporter n=2 Tax=Erythrobacte... 168 3e-40 UniRef50_A1TJC2 Type III secretion protein, YscU/HrpY family n=5... 167 4e-40 UniRef50_B5JK52 FlhB/HrpN/YscU/SpaS family n=1 Tax=Verrucomicrob... 167 5e-40 UniRef50_UPI00019F17CC secretion system apparatus protein SsaU n... 167 7e-40 UniRef50_B0SDH0 Endoflagellar biosynthesis protein n=2 Tax=Lepto... 166 9e-40 UniRef50_B5Y7F6 Flagellar biosynthetic protein FlhB n=1 Tax=Copr... 164 3e-39 UniRef50_C9NX90 Type III secretion inner membrane protein HrpY n... 164 4e-39 UniRef50_Q2SC29 Type III secretory pathway, component EscU n=1 T... 164 6e-39 UniRef50_C0AA48 Type III secretion exporter n=1 Tax=Opitutaceae ... 163 9e-39 UniRef50_UPI0001910014 flagellar biosynthesis protein FlhB n=1 T... 163 1e-38 UniRef50_O83710 Flagellar biosynthetic protein flhB n=4 Tax=Trep... 162 2e-38 UniRef50_A1B5B9 Type III secretion exporter n=3 Tax=Rhodobactera... 161 3e-38 UniRef50_Q057S3 Type III protein export, membrane component n=1 ... 161 4e-38 UniRef50_Q1IR59 Type III secretion exporter n=1 Tax=Candidatus K... 160 5e-38 UniRef50_A8LMR4 Flagellar biosynthesis protein FlhB n=3 Tax=Rhod... 160 9e-38 UniRef50_A6CGV2 Flagellar biosynthetic protein FlhB (Fragment) n... 159 1e-37 UniRef50_Q16DQ8 Flagellar biosynthetic protein FlhB n=15 Tax=Rho... 159 2e-37 UniRef50_B1Z5N7 Type III secretion exporter n=4 Tax=Burkholderia... 158 3e-37 UniRef50_P96069 Secretion system apparatus protein ssaU n=35 Tax... 157 4e-37 UniRef50_D2TZS1 Type III secretion inner membrane protein YscU,S... 156 1e-36 UniRef50_A3D418 Type III secretion protein, YscU/HrpY family n=1... 155 2e-36 UniRef50_Q1NCU7 YscU; putative type III secretion protein n=1 Ta... 155 3e-36 UniRef50_Q44760 Flagellar biosynthetic protein flhB n=23 Tax=Bor... 154 7e-36 UniRef50_Q1MQX2 Translocation protein in type III secretion n=6 ... 153 8e-36 UniRef50_A3NKX0 Type III secretion protein, YscU/HrpY family n=2... 153 9e-36 UniRef50_P35652 Hypersensitivity response secretion protein hrcU... 152 2e-35 UniRef50_A0P0L7 Translocation protein in type III secretion n=1 ... 152 2e-35 UniRef50_A4TRY5 Type III secretion apparatus protein n=30 Tax=En... 152 2e-35 UniRef50_D2LD13 Type III secretion exporter n=1 Tax=Rhodomicrobi... 152 2e-35 UniRef50_Q28JK7 Flagellar biosynthetic protein FlhB n=1 Tax=Jann... 151 3e-35 UniRef50_Q84CR0 Putative type III secretion protein n=3 Tax=Bord... 151 3e-35 UniRef50_A5G0E6 Type III secretion exporter n=1 Tax=Acidiphilium... 151 3e-35 UniRef50_Q6MD75 Putative type III secretion pathway protein sctU... 151 5e-35 UniRef50_A7H8A9 Type III secretion exporter n=1 Tax=Anaeromyxoba... 148 3e-34 UniRef50_B8HEI9 Type III secretion exporter n=1 Tax=Arthrobacter... 145 2e-33 UniRef50_Q1D0P0 Type III secretion protein, FlhB/HrpN/YscU/SpaS ... 144 5e-33 UniRef50_Q0C5I7 FlhB/HrpN/YscU/SpaS family protein n=1 Tax=Hypho... 144 7e-33 UniRef50_A6GN26 Type III secretion component protein SctU n=1 Ta... 144 8e-33 UniRef50_A3P7C2 Type III secretion protein, YscU/HrpY family n=3... 141 3e-32 UniRef50_A4WVT4 Type III secretion exporter n=4 Tax=Rhodobactera... 141 4e-32 UniRef50_Q04SD5 Endoflagellar biosynthesis protein n=4 Tax=Lepto... 140 6e-32 UniRef50_C4PLU4 Type III secretion system inner membrane protein... 139 2e-31 UniRef50_C6CGR8 Type III secretion protein, YscU/HrpY family n=2... 139 2e-31 UniRef50_O85640 Secretion system apparatus protein SsaU n=26 Tax... 139 2e-31 UniRef50_D0ZDM3 Type III secretion apparatus protein n=5 Tax=Edw... 137 8e-31 UniRef50_A3VS81 Flagellar biosynthetic protein FlhB n=1 Tax=Parv... 135 3e-30 UniRef50_C8BNV0 HrcU n=6 Tax=Gammaproteobacteria RepID=C8BNV0_PSESY 132 2e-29 UniRef50_B1K591 Type III secretion exporter n=1 Tax=Burkholderia... 131 4e-29 UniRef50_Q93PY9 RscU n=4 Tax=Pseudomonas RepID=Q93PY9_PSEFL 130 1e-28 UniRef50_C9NP54 Type III secretion protein HrpY n=1 Tax=Vibrio c... 127 9e-28 UniRef50_Q2NR69 Type III secretion apparatus n=5 Tax=Enterobacte... 126 2e-27 UniRef50_B1TGZ0 Flagellar biosynthetic protein FlhB n=1 Tax=Burk... 124 8e-27 UniRef50_Q9F1J7 Putative HrpN (Fragment) n=1 Tax=Acidovorax aven... 121 5e-26 UniRef50_A2WHV2 Flagellar biosynthesis pathway component FlhB n=... 118 4e-25 UniRef50_B3RAC6 SctU: non flagellar T3S system conserved inner m... 118 4e-25 UniRef50_P55723 Probable translocation protein y4yO n=6 Tax=Rhiz... 115 3e-24 UniRef50_D2TZ36 Type III secretion system protein SpaS n=1 Tax=A... 114 4e-24 UniRef50_P40702 Surface presentation of antigens protein spaS n=... 111 5e-23 >UniRef50_Q56886 Flagellar biosynthetic protein flhB n=153 Tax=cellular organisms RepID=FLHB_YEREN Length = 383 Score = 497 bits (1279), Expect = e-139, Method: Compositional matrix adjust. Identities = 246/379 (64%), Positives = 315/379 (83%), Gaps = 1/379 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD DK+E PT H+LEKARE+GQIPRSRELTS+L+L G++++W G S+AR+L+ M Sbjct: 1 MAEDSDADKSEEPTAHKLEKAREKGQIPRSRELTSMLMLGAGLAILWVSGESMARQLAAM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 ++ GLHFDH +I+D +L QI +L+R+ ++ L+P+ +G+V+VA+ P++LGG++FSG+S Sbjct: 61 IAQGLHFDHGLISDDKQMLRQIGMLLRQTLIGLIPIFAGLVIVAMAVPMLLGGVLFSGES 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++ +++P+ G+KRMFS+Q AELLKAILK LVG VTG FLWH+WP MMRLMA P+ Sbjct: 121 IKFDLKRMSPIAGLKRMFSSQALAELLKAILKATLVGWVTGIFLWHNWPDMMRLMAAPPV 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+G+A+ L+ C L+VVLG+ PMVGFDVFFQI SH+KKLRM++Q+IRDEFK EGDPHV Sbjct: 181 AALGDALHLIIFCGLVVVLGLTPMVGFDVFFQITSHIKKLRMTKQEIRDEFKDQEGDPHV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ QRA ARRRMMADV KADVIV NPTHY+VALQY+E KMSAPKV+AKGAG VALR Sbjct: 241 KGRIRQQQRAMARRRMMADVHKADVIVTNPTHYAVALQYNETKMSAPKVLAKGAGAVALR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+GAE+ +P LEAPPLARAL+RH+E+GQ IP LYAAVAEVLAWV+QLKRW+ GG Sbjct: 301 IRELGAEHRIPLLEAPPLARALFRHSEVGQHIPATLYAAVAEVLAWVYQLKRWKREGGLI 360 Query: 360 PVQPTHLPVPEALDFINEK 378 P +P HLPVPE LDF E+ Sbjct: 361 PKKPEHLPVPEGLDFATEE 379 >UniRef50_Q2NX25 Flagellar biosynthetic protein FlhB n=7 Tax=Enterobacteriaceae RepID=Q2NX25_SODGM Length = 387 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 201/385 (52%), Positives = 275/385 (71%), Gaps = 6/385 (1%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M++ESD +K+EAPTPHRL+KAR+EGQ+PRS+EL S L+LL G S++W G LA+ + M Sbjct: 1 MAEESDLEKSEAPTPHRLQKARKEGQVPRSKELVSWLMLLSGWSLLWLAGGHLAQGMGLM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L +GL F I D + +L Q L+R+A+LA PLI GV LVA +P+++GG++FS K+ Sbjct: 61 LESGLTFSFHINGDRHWLLAQFSGLVRQALLACAPLILGVTLVAAGAPMLIGGVMFSSKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + +LNP G+KR+FS Q AE +K + K LVG G LW WP+M +L +P Sbjct: 121 VSLDLKRLNPFSGLKRLFSMQMIAEFIKTLFKVCLVGGACGTALWFVWPRMTQLAQGAPH 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 M ++ L+ C L+++L +IP+VGFD+ +Q+FSH+KKLRMSR DIR+E+K+ EGDP + Sbjct: 181 RVMAESLSLISQCVLVIILALIPVVGFDILYQLFSHMKKLRMSRHDIREEYKEQEGDPQL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K IRQ QR A++RMM DV KADV++ NPTHY+VAL+Y++ +M+ P+++AKGAG VAL Sbjct: 241 KSLIRQRQRQQAQQRMMQDVAKADVVILNPTHYAVALKYEQMRMTTPRLLAKGAGAVALN 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IR+ ++ +PTL APPLARAL+RH EIG IP LY AVAEVLAWV+ L+RWR GG R Sbjct: 301 IRQRAEQHRIPTLVAPPLARALFRHCEIGSAIPVALYGAVAEVLAWVYGLRRWRKQGGLR 360 Query: 360 PVQPTHLPVPEALD-----FINEKP 379 P QP +L VP+A+D N KP Sbjct: 361 PRQPGNLTVPKAMDCAKGSIFNGKP 385 >UniRef50_B2T7B1 Flagellar biosynthetic protein FlhB n=18 Tax=Burkholderia RepID=B2T7B1_BURPP Length = 403 Score = 366 bits (939), Expect = e-99, Method: Compositional matrix adjust. Identities = 183/374 (48%), Positives = 256/374 (68%), Gaps = 1/374 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD +KTE+ TP RL+KAREEGQI RSREL++ +L G +W S+ L GM Sbjct: 1 MAEDSDLEKTESATPRRLQKAREEGQIVRSRELSTFALLAAGFFGVWGMSGSIGEHLQGM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L A FDH+ + ++ + RE + ALLP+++ + AL +P+ LGG S K Sbjct: 61 LRAAFSFDHAGAFETRRMMIGAGVASREGLYALLPILAFTGVAALFAPMALGGWQLSAKG 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+PKF +LNP+ G+ +MFS +L ++ KT++VG + G +W+ +++ L + Sbjct: 121 LEPKFDRLNPIAGLGKMFSINGPIQLGMSLAKTLVVGVIGGTAIWNRREEILALAMQPLH 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ N + L+ +C + V G+ + DV +Q++ KKLRM++++++ E ++SEGDPHV Sbjct: 181 LALANTVHLIAVCCGMTVAGMFVVAAMDVPYQLWQFHKKLRMTKEEVKREHRESEGDPHV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ QRA ARRRMM +VPKADV+V NPTH++VALQY + +M APKVVAKG LVA R Sbjct: 241 KGRIRQQQRAIARRRMMTNVPKADVVVTNPTHFAVALQYTDGEMRAPKVVAKGVNLVAAR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IREI AENNVP LEAPPLARALY + E+ ++IPG LY AVAEVLAWV+QL+R++ GG Sbjct: 301 IREIAAENNVPLLEAPPLARALYHNVELNREIPGPLYGAVAEVLAWVYQLRRFKTEGGDV 360 Query: 360 PVQPTHLPVPEALD 373 P+ PT L VP LD Sbjct: 361 PLAPTELDVPAELD 374 >UniRef50_Q46PH4 Flagellar biosynthetic protein FlhB n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PH4_RALEJ Length = 380 Score = 360 bits (924), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 185/373 (49%), Positives = 265/373 (71%), Gaps = 1/373 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MSDESD +KTE +P RLEKAREEGQ+ RSREL + ++L+ GV +W G ++ R L + Sbjct: 1 MSDESDLEKTEPASPRRLEKAREEGQVVRSRELATFIMLMTGVIGLWTLGGTIGRSLDTV 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + L F+ + D + +L + +I E++LA +PL+ + A+ +P+++GG FS K+ Sbjct: 61 MRQSLRFEPATAFDTSRMLSRFANVIWESLLAFMPLLLLFGVAAVAAPLLMGGWTFSTKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P F +++P+ G+ RMFS + AEL+KAI K++LVGSV + +WH P + LM Sbjct: 121 LMPNFGRMSPMSGLGRMFSVHSVAELVKAIAKSLLVGSVGAWVVWHRLPDAIALMNAPVQ 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ + +D+V C + VVL ++ + DV +Q + H KKLRMS+++++ EFK+SEGDPH+ Sbjct: 181 EALLHMLDMVLRCCVPVVLSLLLVAAIDVPWQFWEHFKKLRMSKEEVKQEFKESEGDPHI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ QRA ARRRMM +VPKADV+V NPTH++VAL+Y+E +MSAP+V+AKG VA R Sbjct: 241 KGRIRQQQRAMARRRMMQEVPKADVVVTNPTHFAVALRYEEGRMSAPRVIAKGTDEVAAR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+ AE+ +P + APPLARAL+RH ++GQ+IP LY AVAEVLAWV+QLK W + G + Sbjct: 301 IRELAAEHRIPLMSAPPLARALHRHVDLGQEIPAGLYTAVAEVLAWVYQLKHWHYSQGPQ 360 Query: 360 PVQPTHLPVPEAL 372 P P+ L VP+ L Sbjct: 361 PSAPSDLLVPDEL 373 >UniRef50_A6SZT0 FlhB flagellar biosynthetic protein n=14 Tax=Betaproteobacteria RepID=A6SZT0_JANMA Length = 402 Score = 350 bits (898), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 180/377 (47%), Positives = 251/377 (66%), Gaps = 1/377 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 +++ESD +KTE +P +LE+ARE+G +PRSREL + +LL + W G + L+ M Sbjct: 13 LAEESDLEKTEPASPRKLEQAREQGDVPRSRELATCTLLLGAGAAFWILGGRMVGELNKM 72 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L+AGL FD + D L+L I + ++A P +++VALISP ++GG +FSGK+ Sbjct: 73 LAAGLSFDREMAFDMELLLAHAAASIIDLLIAFAPAALILIVVALISPALIGGWLFSGKA 132 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 LQP F ++NP+ G+ M S++ EL KAI KTIL+G + + H + +M L E Sbjct: 133 LQPNFGRMNPIKGLGNMVSSRAAVELGKAIAKTILIGWIAWMVMRHEFDAVMALSVEPLK 192 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + + L+ + + G++ + D +Q++ H KKL MSRQD+R E K+SEG+P + Sbjct: 193 SGTEHLGHLLVFSFIFIAAGLVIVAAIDAPYQMWQHAKKLMMSRQDVRQESKESEGNPEI 252 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +IRQ QR ARRRMMA+VP ADV+V NPTHY+VAL+Y EN M AP+VVAKGA VA + Sbjct: 253 KAKIRQQQREMARRRMMAEVPTADVVVTNPTHYAVALKYSENGMRAPRVVAKGADEVAAK 312 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+ ENNV LEAPPLARAL+RHAE+G +IP LY AVAEVLA+V+QL+ + GG R Sbjct: 313 IRELAMENNVVLLEAPPLARALFRHAELGDEIPEALYIAVAEVLAYVFQLRAYSKHGGAR 372 Query: 360 PVQPTHLPVPEALDFIN 376 PV+P L VP +D +N Sbjct: 373 PVKPGDLEVPPEMDPLN 389 >UniRef50_P57334 Flagellar biosynthetic protein flhB n=4 Tax=Buchnera aphidicola RepID=FLHB_BUCAI Length = 383 Score = 329 bits (843), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 156/380 (41%), Positives = 253/380 (66%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 + +++KTE PT HR+ K R++G+ SREL+SL ILLVG +W+ + S ++S Sbjct: 4 NTNEEKTEHPTEHRIRKFRKKGKTRYSRELSSLFILLVGFINLWWYRDLIVLNFSKIMSD 63 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 F+ + + N L +I++ ++E + + P + +++V +I P++ G+ + +SL Sbjct: 64 SFLFESNDFLNNNNNLLKILMSLKEILFSFFPFLISLLIVIIIPPILFSGISLNFRSLTL 123 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 FSKLNP G KR+FS Q E K ILK +V ++ ++L + +++ L+ + ++++ Sbjct: 124 NFSKLNPFHGFKRLFSFQIIVEFFKIILKLFIVSIISFWYLQFSFSEILFLVNANYVSSL 183 Query: 183 GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 + +++ C LV+LG+ P+V FD+ +Q F++ KKL+M+RQ++RDE K+ EG+P++K R Sbjct: 184 SHGYNIIFSCCFLVILGLFPIVFFDIAWQQFNYYKKLKMTRQEMRDELKEKEGNPNIKMR 243 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 IRQ +A RRRM+ + PKADVI+ NP HYSVAL+YDE M+APKV+AKG G A++I+ Sbjct: 244 IRQAMKAVMRRRMIINTPKADVIITNPIHYSVALKYDEKNMNAPKVIAKGIGEAAIKIQN 303 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQ 362 + ++N+ + P LAR+LYR++EIGQ IPG LY AVAEVLAWVW++++W+ GG P + Sbjct: 304 LALKHNISIISVPSLARSLYRYSEIGQYIPGPLYKAVAEVLAWVWKVRKWKKEGGIFPEK 363 Query: 363 PTHLPVPEALDFINEKPTHE 382 P ++ VP L F E T++ Sbjct: 364 PINISVPSELTFTGEHETND 383 >UniRef50_C1D4I4 FlhB1 n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4I4_LARHH Length = 389 Score = 326 bits (835), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 170/375 (45%), Positives = 256/375 (68%), Gaps = 4/375 (1%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVS-VIWFGGVSLARRLSG 58 M+++SD ++TE TP R E+AREEGQ+PRSREL + + + GV+ ++ +GGV L ++L Sbjct: 1 MAEDSDLERTEEATPRRREQAREEGQVPRSRELATFTVTMTGVAMLVAYGGV-LYQQLKE 59 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + L F + ++ + + + + ++++LP++ + ++AL++P ++GG S K Sbjct: 60 LFARTLTFTRATLDAEDAAQLALRGGLTDGLVSILPILGVLFVLALVTPALIGGWNLSWK 119 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +++PKFSK+NPL GIKR+FS Q E KAILK++L+G V + +W+ +++ L S Sbjct: 120 AVEPKFSKINPLSGIKRIFSVQGAIEGAKAILKSLLIGGVATWVIWNERAELVSLTRLSL 179 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ A+DL L+V ++ +V DV FQ++ + K LRM+++D++ E K+SEG P Sbjct: 180 DQALARAVDLTLHTLLIVAGAMVLLVLIDVPFQLWQYSKNLRMTKEDVKKEMKESEGSPE 239 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VKGRIRQ+QR AARRRMM+DVP A V++ NPTHY+VAL+Y E+ M+APKV+AKG+ VA Sbjct: 240 VKGRIRQLQREAARRRMMSDVPNASVVITNPTHYAVALRY-EDGMAAPKVIAKGSMKVAE 298 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 RI E+ EN V L APP ARALY ++EIG IP LY+A A+VLA+V+QL+ + GG Sbjct: 299 RIIELARENRVTILRAPPFARALYFNSEIGDDIPAALYSAAAQVLAYVFQLRAYEKHGGI 358 Query: 359 RPVQPTHLPVPEALD 373 PV P LPVP LD Sbjct: 359 APVYPDKLPVPPDLD 373 >UniRef50_Q3JY73 Flagellar biosynthetic protein FlhB n=61 Tax=cellular organisms RepID=Q3JY73_BURP1 Length = 470 Score = 322 bits (825), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 178/374 (47%), Positives = 250/374 (66%), Gaps = 1/374 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 ++++SD D+TEA TP R EKAREEGQ+ RSREL S +L G W + L M Sbjct: 70 VAEDSDLDRTEAATPKRREKAREEGQVARSRELASFALLSAGFYGAWMLSGPIGEHLRTM 129 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L FD + D N +L L E + AL P+++ + AL +P+ +GG + S K+ Sbjct: 130 LHTAFSFDRAAAFDTNRMLSHAGTLSLEGLYALAPVLALTGVAALAAPMAMGGWLVSTKT 189 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + KF +LNP+ G+ R+FS Q +L +I KT++VG + G +W +++ L + Sbjct: 190 FELKFERLNPITGLGRIFSIQGPIQLGMSIAKTLVVGGIGGIAIWRSKDELLGLATQPLH 249 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ +A+ LV +C + V G++ + G DV +Q++ + KKLRM++++I+ E +++EGDPHV Sbjct: 250 AALADALHLVAVCCGMTVAGMLVVAGLDVPYQLWQYNKKLRMTKEEIKREHRENEGDPHV 309 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ QRA ARRRMMA+VP ADV+V NPTH++VAL+Y + +M APKVVAKG LVA R Sbjct: 310 KGRIRQQQRAMARRRMMANVPTADVVVTNPTHFAVALKYTDGEMRAPKVVAKGVNLVAAR 369 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+ AE++VP LEAPPLARALY + E+ ++IPG LY+AVAEVLAWV+QLKR+R G Sbjct: 370 IRELAAEHHVPLLEAPPLARALYHNVELEREIPGTLYSAVAEVLAWVYQLKRFRAEAGIA 429 Query: 360 PVQPTHLPVPEALD 373 P P L VP LD Sbjct: 430 PETPVDLDVPAELD 443 >UniRef50_B9Z6P8 Flagellar biosynthetic protein FlhB n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6P8_9NEIS Length = 388 Score = 318 bits (815), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 162/374 (43%), Positives = 251/374 (67%), Gaps = 2/374 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD ++TEA T RL++AREEG IPRSREL++ + + GV+++ G L + + Sbjct: 1 MAEDSDLERTEAATGRRLQQAREEGNIPRSRELSTFAVTMTGVALLMAMGERLGNFMLQL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + FDH ++ + +L + + + +L L+PL G+ LVA+ +P+++GG + K Sbjct: 61 MRRLFTFDHDMVQHTDPVLLRFKESLTDTLLQLMPLFGGLALVAVAAPLLVGGWNLTFKG 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++PK SKLNP GI+RMFS E LKAILK++++G V + +W+ +++ L+A Sbjct: 121 IEPKLSKLNPAHGIQRMFSLSALTEALKAILKSVVIGGVATWVIWNERAELIGLIAMPLE 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 TA+G M L LLVV ++ +V DV FQI+++ K+LRM++++++ E+K+ EG P V Sbjct: 181 TALGKMMQLTFHTFLLVVGAMLLLVVVDVPFQIWNYHKQLRMTKEEVKQEYKEQEGSPEV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ+QR AA+RRMM ++P A+VIV NPTHY+VAL+Y E M AP+V+AKG +A + Sbjct: 241 KGRIRQLQRQAAQRRMMQEIPSANVIVTNPTHYAVALKYTEG-MRAPQVIAKGRLKLAEK 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I + G E+ V + P ARALY H+E+G+++P +LY A A++LA+V+QLK + GG Sbjct: 300 IIDTGREHRVTVMRVPSFARALYFHSELGEEVPSRLYGAAAQILAYVYQLKLYEYNGGLA 359 Query: 360 PVQPTHLPVPEALD 373 PV P H+ VP LD Sbjct: 360 PVYPEHVEVPADLD 373 >UniRef50_B8GQZ9 Flagellar biosynthetic protein FlhB n=8 Tax=Gammaproteobacteria RepID=B8GQZ9_THISH Length = 384 Score = 318 bits (814), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 171/371 (46%), Positives = 237/371 (63%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 D S +K+E PTP RL +ARE+GQ+ RSREL + L+LL G + G + R+ M+ Sbjct: 5 DDSSQEKSEQPTPKRLREAREKGQVARSRELNTTLVLLAGAGAMLVLGGGMLSRIQEMVR 64 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + I D + + +IL I E++L LLPL +++ A+ P+ +GG FSGK++ Sbjct: 65 GSFVLEREAIFDASTMQAMLILRISESLLMLLPLFGILLVAAVAGPIAMGGGGFSGKAMA 124 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK++KLNP+ G+KR+FS Q E K + K L+ ++ G LW ++ L +S Sbjct: 125 PKWNKLNPIAGLKRIFSWQGLMEFGKTLAKFALITAIAGSLLWGLSDSLLGLGYQSLEQG 184 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 +G A +VG LL+ +I + DV FQ+++H K+LRM++Q ++DE+K++EG P VK Sbjct: 185 LGRAAWIVGWTFLLLAASLILVALVDVPFQLWNHQKQLRMTKQQVKDEYKETEGKPEVKS 244 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQ Q ARRRMMA VPKADV+V NPTHY+VAL+YD+N APKVVAKGA LVA IR Sbjct: 245 RIRQTQMEIARRRMMAAVPKADVVVTNPTHYAVALRYDQNGSGAPKVVAKGADLVAAEIR 304 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 E E VP APPLARA++ + Q+IP LY AVA+VLA+V+QLK AG + PV Sbjct: 305 ERAREAGVPLFPAPPLARAIFYSTRLDQEIPAGLYVAVAQVLAYVYQLKAAGRAGARAPV 364 Query: 362 QPTHLPVPEAL 372 P LPVP+ L Sbjct: 365 PPADLPVPDEL 375 >UniRef50_Q2SBX1 Flagellar biosynthesis pathway, component FlhB n=7 Tax=Gammaproteobacteria RepID=Q2SBX1_HAHCH Length = 378 Score = 317 bits (812), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 155/371 (41%), Positives = 240/371 (64%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 +D S +KTE PTP ++EKAREEGQIPRSREL + +LL G + G ++ + L G+ Sbjct: 4 NDTSQEKTEEPTPRKIEKAREEGQIPRSRELNTTAVLLAGAVGLLVFGTTIGKALEGVFR 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 A + D + + + + + ++L+P + +++ +L+ P+ LGG + S K+ Sbjct: 64 ASFTLTREEVFDAHQPMIHLGMAALDMAISLVPFMLVLLVASLLGPIALGGWMMSAKAAA 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PKFS++NPL G+KRMFS ++ EL K + KT++VG V L + P ++ + +E + + Sbjct: 124 PKFSRINPLEGLKRMFSLKSLMELFKGVAKTLVVGGVALIILNYSIPDLLAMGSEDTMVS 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 M +A L+ L + +I + DV FQI+ + K LRM+ Q+I+DE+K +EG P VK Sbjct: 184 MAHACSLLAWSFLFLASSMILIALVDVPFQIYDNQKNLRMTMQEIKDEYKDTEGKPEVKR 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 R+R++Q +RRRM+ DVPKADV++ NPTHYSVAL+YD KM+AP V+AKGA +A++IR Sbjct: 244 RVREVQYEMSRRRMLQDVPKADVVITNPTHYSVALKYDAKKMAAPIVLAKGADHMAMKIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 EI + + + APPL R++Y H E+G++IP LY AVA+VLA+V+QL+R+R G++P Sbjct: 304 EIANAHKIELVSAPPLTRSIYHHTEVGEEIPSGLYLAVAQVLAYVFQLRRYRGGYGKKPQ 363 Query: 362 QPTHLPVPEAL 372 +P L Sbjct: 364 GTPDFTIPSHL 374 >UniRef50_Q2Y9F9 Flagellar biosynthetic protein FlhB n=2 Tax=Betaproteobacteria RepID=Q2Y9F9_NITMU Length = 392 Score = 315 bits (807), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 169/381 (44%), Positives = 255/381 (66%), Gaps = 5/381 (1%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS+ESD ++TE +P RLEK+REEGQ PRS EL++ +L+ + +W G L+ +L+ + Sbjct: 1 MSEESDQERTEPASPRRLEKSREEGQAPRSTELSTFALLIAAGTGLWLMGGHLSSQLARL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + G+H +P + ++ A++ P + ++LVAL++P++L G +FS KS Sbjct: 61 MKEGMHIPRETGFEPARLAERLFDQSFHALITFAPFLILMILVALVAPMLLSGWLFSWKS 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P F ++NPL G+ RMFS + EL KA+LK L+G + +WH+ ++ L+A + Sbjct: 121 LNPDFKRINPLSGLSRMFSLHSLLELAKALLKAALIGGAGVWTIWHYKESVLSLIARPLV 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + + +LV L + +I + DV F+++ H +KLRM+++++R E K++EG+P + Sbjct: 181 PGLTHMGELVALSFFSIAGTMILIATVDVPFKLWDHYRKLRMTKEEVRQENKETEGNPQI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR QR AR+RMM ++P+ADVI+ NPTHYSVAL+Y++ KM AP+VVAKG L+AL+ Sbjct: 241 KGRIRAQQREMARKRMMTEIPRADVIITNPTHYSVALRYEDGKMRAPRVVAKGMHLLALK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR---WRLAG 356 IREIG ++ VP LEAPPLARALY+H E+G +IP LY VAEVLA+V+QL+R + +G Sbjct: 301 IREIGHQHKVPVLEAPPLARALYQHTELGDEIPQTLYNVVAEVLAYVYQLRRHQQYGPSG 360 Query: 357 GQRPVQPTHLPVPEALDFINE 377 G+ PV P L VP LD N+ Sbjct: 361 GKAPVLP-ELDVPVELDPENK 380 >UniRef50_Q31HN4 Flagellar biosynthetic protein FlhB n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HN4_THICR Length = 381 Score = 313 bits (803), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 156/381 (40%), Positives = 250/381 (65%), Gaps = 8/381 (2%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 +++ +K+E P+ +L +ARE+GQ+PRS+ELT+LL+ L ++F G + + + Sbjct: 4 NEDGTEKSEEPSEKKLREAREKGQVPRSKELTTLLMTLGAAVFLYFFGAQMMQDFETLFI 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 GL FD S D + ++ L+ ++ ++P + +VL+A++SP++LGG FS ++L Sbjct: 64 KGLSFDRSHAYDFQMATNLVLGLVVHSIYMMVPFLLLMVLIAVVSPMLLGGWNFSTQALA 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK SKLNP+ GIK+MFS EL KA K LV V GFFLW+ + +++ + E P A Sbjct: 124 PKISKLNPVSGIKKMFSMNALMELFKAFAKFTLVSVVAGFFLWYSYEEIISIGIEPPKQA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + +A L+ + V L +I + DV FQI H+ +L+M++Q++++E KQ EG P VKG Sbjct: 184 LAHAGQLIVEAFIFVSLSLILIAAIDVPFQIHQHVTQLKMTKQEVKEEHKQQEGSPEVKG 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQ+QR +++RMM VP+ADV++ NPTH++VAL+Y ++M+ P V+A G+ +A +IR Sbjct: 244 RIRQLQREMSQKRMMQKVPEADVVITNPTHFAVALKYAPDEMAEPMVLALGSDFMAAQIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP- 360 + E+N+P +EAPPLARALY +AE+ + IP +L+ AVA +LA+V+QL+ G+R Sbjct: 304 TLAKEHNIPLIEAPPLARALYYNAEVDRPIPYELFRAVAAILAYVYQLR-----DGKRTD 358 Query: 361 -VQPTHLPVPEALDFINEKPT 380 V +LP+PE + +E P+ Sbjct: 359 RVDFENLPIPEEMK-TDEVPS 378 >UniRef50_B2UHW8 Flagellar biosynthetic protein FlhB n=6 Tax=Ralstonia RepID=B2UHW8_RALPJ Length = 387 Score = 310 bits (793), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 173/378 (45%), Positives = 241/378 (63%), Gaps = 10/378 (2%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS+ESD +KTE +P RLE+AREEG +PRSREL S + V +W G S+ R S Sbjct: 1 MSEESDLEKTEPASPRRLEQAREEGDVPRSRELASFALTAVSAGGLWVMGDSIVRAASSF 60 Query: 60 LSAGLHF---DHSIINDP-NLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVF 115 L+ L F +++ D N + GQ + L +L L+ +A +SP+ L Sbjct: 61 LARCLEFHRYNYTSGQDQWNYVTGQFMPLAMTLGGLMLMLV-----IAALSPLALTRGAI 115 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 S K L P S+L L G+ RMFS + EL + ++K L+ V + ++ ++ L Sbjct: 116 SFKPLSPDISRLFKLQGLTRMFSLEGLMELPRLLIKLFLIAGVGWLLVRYYRGDLIELPQ 175 Query: 176 ESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 + AM + + + G+ L + ++ + DV ++ + +K RM+++++R E ++SEG Sbjct: 176 QDLGVAMRDTLHVAGVAFLCMAAVMMLVAAVDVPLSLWQYARKHRMTKEEVRKEHRESEG 235 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DPHVKGRIR +QR AA+RRMMADVPKADVIV NPTHY+VAL+Y E + AP+V+AKGA + Sbjct: 236 DPHVKGRIRNLQRQAAQRRMMADVPKADVIVTNPTHYAVALRYSEKEGGAPRVLAKGADM 295 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 VA +IRE+G E+ +P LEAPPLARALYRH EIG QIP LYAAVAEVLA+V+QL+R Sbjct: 296 VAAKIRELGTEHKIPILEAPPLARALYRHTEIGHQIPEALYAAVAEVLAYVYQLRRLHQV 355 Query: 356 GGQRPVQPTHLPVPEALD 373 GG+ PV+PT LPVP LD Sbjct: 356 GGRVPVRPTDLPVPAELD 373 >UniRef50_Q47I36 Flagellar biosynthetic protein FlhB n=1 Tax=Dechloromonas aromatica RCB RepID=Q47I36_DECAR Length = 379 Score = 307 bits (786), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 170/373 (45%), Positives = 243/373 (65%), Gaps = 2/373 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD +KTE PT R+E+ARE+GQ+P SREL + L+L V + W G +R + Sbjct: 3 MAEDSDLEKTEEPTGRRIEQAREQGQVPHSRELATFLVLAVAGATFWMMGSWFMQRSLVI 62 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + G + + DP+L+L ++ + +A+ PL+ ++L A++ P L VFS K+ Sbjct: 63 MQKGFFVESRYMRDPDLMLPRLAEISGDALFVFSPLLGLLLLAAILPPFFLNAWVFSPKA 122 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P ++LNPL G RMFS + EL KA+LK +LVG V +W ++ L+ E Sbjct: 123 LVPDLNRLNPLSGFGRMFSWNSLMELAKAVLKAVLVGGVAAMLIWKERDEIFGLLGEPLE 182 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + +A LV L++V ++ +V DV FQ++ + KL+MS+++++ E K+ GDPHV Sbjct: 183 VGLAHAGHLVSFSFLILVATLVLVVVADVPFQLWQYFDKLKMSKEEVKQEMKEMMGDPHV 242 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR +Q AAR+RMM+ VPKA+V+V NPTHY+VAL Y + M APKVVAKG G VAL+ Sbjct: 243 KGRIRSLQMQAARKRMMSAVPKANVVVTNPTHYAVALAY-QTGMGAPKVVAKGVGAVALK 301 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I+EI E+ VP +EAPPLARALY+H+E+ +IP LY AVAEVLA+++QL WR GG Sbjct: 302 IKEIANEHAVPIMEAPPLARALYKHSELDTEIPSALYNAVAEVLAYIYQLANWRQVGGIY 361 Query: 360 PVQPTHLPVPEAL 372 PV P LPVP L Sbjct: 362 PVPPRDLPVPPEL 374 >UniRef50_Q3V7G4 Flagellar biosynthetic protein flhB n=2 Tax=Proteobacteria RepID=Q3V7G4_AZOSE Length = 388 Score = 301 bits (770), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 152/322 (47%), Positives = 223/322 (69%), Gaps = 1/322 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD +KTE +P RLE+AREEGQ+P+SREL++ L+L+ G S +W G + R+ GM Sbjct: 1 MAEDSDLEKTEQASPRRLEQAREEGQVPQSRELSTFLVLITGASGLWLMGGWIGERMLGM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L G F+ ++ DP L+L L +A+L +LPL +++ A+ +P++LGG VFS K+ Sbjct: 61 LRHGFRFERALAFDPQLMLQDFGDLFTQALLTMLPLFGVLMVAAVGAPILLGGFVFSPKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L + +++PL GI RMF E+LK++LK +VG + F +W + L +E+ Sbjct: 121 LGLELDRMDPLKGIGRMFLLHGLVEMLKSLLKAAVVGGIGVFAMWRERDHIFALTSEAVE 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ + + V ALL+++G+ + DV FQ++ + K+LRM++++++ E K+ EGDPHV Sbjct: 181 RAVPDFLQAVLFSALLIIMGLALLALIDVPFQLWQYHKRLRMTKEEVKREGKEQEGDPHV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR MQR ARRRMMA+VPKADV+V NPTH+SVAL+YD KM AP VVAKG G +AL+ Sbjct: 241 KGRIRSMQREMARRRMMAEVPKADVVVTNPTHFSVALKYDAQKMGAPVVVAKGRGEIALK 300 Query: 300 IREIGAENNVPTLEAPPLARAL 321 IRE+ E+ VP LEAPPLARA+ Sbjct: 301 IRELAKEHKVPLLEAPPLARAV 322 >UniRef50_Q8D3G7 FlhB protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D3G7_WIGBR Length = 385 Score = 300 bits (769), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 154/379 (40%), Positives = 239/379 (63%), Gaps = 5/379 (1%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS++ + +K E PTP+RL+KAR +G IPRSRELTS IL+ G +IWF G +L ++ Sbjct: 1 MSNKDELEKQEDPTPNRLKKARSKGNIPRSRELTSFSILIFGWILIWFTGNNLLDKIIVE 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L L+F + N IL I L+ ++ + P+I ++++ +IS +LGG VFS KS Sbjct: 61 LKKNLNFKLYLYEHINYILVNIYLISKKFFFIIFPIIFIIMIITIISSGLLGGWVFSKKS 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L FS+LNP I R+FS E+ K + K + F+LWH Q+ L + Sbjct: 121 LNIDFSRLNPYKNISRIFSKNVFIEMAKTLFKFFFMLFSCIFYLWHTRFQISDLSDNNYS 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ N + ++ C +++L IP+V FD FQ+F+ K LRMS+++++DE K++EG+P + Sbjct: 181 NAIKNCILIISKCVFVIILSSIPIVFFDSIFQLFTFKKNLRMSKKEVQDENKENEGNPQL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K IR+ QR RMM +V K+DVI+ NPT+Y+V L+Y++N M AP ++AKG G +A++ Sbjct: 241 KHYIRKKQRHIYNMRMMQNVEKSDVIIVNPTNYAVGLKYEKN-MKAPVLLAKGTGNIAIK 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I+E E +P + PPLARA+Y++ IG+ IP +LY +VAE+L WV+ LK W+ GG Sbjct: 300 IKEKAQEKFIPIIAVPPLARAIYKYCNIGEYIPIELYESVAEILTWVYNLKNWKKLGGNP 359 Query: 360 PVQPTHLPVPEALDFINEK 378 P +P + +P ++IN++ Sbjct: 360 PKKPIGIKIP---NYINKR 375 >UniRef50_A6GUU4 Flagellar biosynthetic protein FlhB n=1 Tax=Limnobacter sp. MED105 RepID=A6GUU4_9BURK Length = 376 Score = 298 bits (763), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 159/374 (42%), Positives = 241/374 (64%), Gaps = 4/374 (1%) Query: 1 MSDESDDKTEAP-TPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M++E+D + + P + ++ KAREEG +PRSREL ++LL GV +++ G L + + Sbjct: 1 MAEETDQEKDLPASEQKIRKAREEGNLPRSRELGGGVVLLAGVGLLYTMGGELVSQSEKL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + GL D + D + + + +++E++ L+PL VV+ A++S + +GG +S K Sbjct: 61 MRQGLVLDRAQAFDTKHMGLKWVSMLQESLFILIPLFLVVVVAAIVSNIAVGGFNWSTKP 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+PK SKLNP+ G+K +FS AEL+KAILKT+++G V L + +L A Sbjct: 121 LEPKLSKLNPVKGLKNIFSVNGLAELVKAILKTVVLGGVGYLLLMQDLGEFTQLSAMPLE 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 M + AL++ + + +V DV +Q++ + K LRM+ ++++ E K+S+GDPH+ Sbjct: 181 HGMAETARITIKDALILAIAFLLIVSIDVPYQLWRYYKGLRMNLEELKRESKESDGDPHL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KG+I+ MQR AARRRMMA VP ADVIV NPTHYSVAL+YD++ AP+VVAKG G +AL+ Sbjct: 241 KGKIKSMQREAARRRMMASVPNADVIVTNPTHYSVALKYDKDGKGAPRVVAKGIGPLALK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+ EN VP +EAPPLARALY + E+ Q+IPG LY AVA++LA+V+ L + G Sbjct: 301 IREVAQENKVPLVEAPPLARALYSNVELEQEIPGALYTAVAKLLAYVYALAEGK---GHM 357 Query: 360 PVQPTHLPVPEALD 373 P +P+ +D Sbjct: 358 VEVPGEADIPKGMD 371 >UniRef50_C6NWP2 Flagellar biosynthesis protein FlhB n=2 Tax=Proteobacteria RepID=C6NWP2_9GAMM Length = 375 Score = 296 bits (758), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 168/372 (45%), Positives = 251/372 (67%), Gaps = 4/372 (1%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 ++S ++TEA TP + E AR++GQ+PRSREL++ +LL+ S+++ G + + L A Sbjct: 4 EQSQERTEAATPKKREDARKKGQVPRSRELSTSALLLLSASLLYGLGSEIQTMATDFLRA 63 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 GL +++++ +L ++ + A+ +LPL ++LV +++ + LGG FS K+L P Sbjct: 64 GLRLTPAVMSNHQDLLRHLVQMAGLALSDVLPLWLALMLVVVLASIALGGWNFSTKTLIP 123 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 FS L+P+ GI+R+FS + EL+KA LKT++VG + +W +++ L+ SP +AM Sbjct: 124 NFSHLDPIEGIQRLFSRRGFLELVKAALKTLVVGGIGVTVIWAQRGELLGLIQISPKSAM 183 Query: 183 GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 + + + GL L++ +G + +V FDV FQ++S +KL+MSRQDI+DE K+ +G+P +K + Sbjct: 184 VSLLSMSGLVFLIMAVGTLLIVLFDVPFQLWSFNEKLKMSRQDIKDEMKEMDGNPQIKTK 243 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 +R MQR ARRRMMA +P A V+V NPTHY+VAL+Y E++ AP V+AKGAG VALRIRE Sbjct: 244 VRSMQREMARRRMMAAIPSASVVVTNPTHYAVALRYVESENRAPVVLAKGAGNVALRIRE 303 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA-GGQRPV 361 + E+ VP +EAPPLARALY H E+ Q+IP LY AVAEVLA++ QL RLA GQ Sbjct: 304 LAQEHGVPLVEAPPLARALYHHVELEQEIPALLYRAVAEVLAYLHQL---RLAPPGQALE 360 Query: 362 QPTHLPVPEALD 373 P VP LD Sbjct: 361 LPEQWSVPPELD 372 >UniRef50_A1WUA6 Flagellar biosynthetic protein FlhB n=3 Tax=Gammaproteobacteria RepID=A1WUA6_HALHL Length = 391 Score = 296 bits (757), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 163/388 (42%), Positives = 244/388 (62%), Gaps = 10/388 (2%) Query: 1 MSDESDD---KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M+ ES+D KTE PTP R E++R++GQ+PRSRELT++L+LLV + G + +L+ Sbjct: 1 MAQESEDGQEKTEDPTPKRREESRKKGQVPRSRELTTMLLLLVAAGALLALGPFMGNQLT 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 +L D S I DP +++ ++ + +L +LP I+ ++ A+I+P LGG FS Sbjct: 61 ALLEWSFTIDRSHIYDPGIVIERLHEALGRGLLTVLPFIAVMLAAAVIAPTALGGWSFSF 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILV-GSVTGFF--LWHHWPQMMRLM 174 +QPK KL+P+ G +RMF + EL KA+ K +++ G+ G F W ++ M R Sbjct: 121 HPMQPKPEKLSPIKGFQRMFGTKAAVELGKALGKVLVIGGTAVGLFVLFWDNFYTMSRAP 180 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 E +M M L + L+ L ++ +V D+ +QI+ H +K+RM+RQ++++EFKQ+E Sbjct: 181 LEP---SMAEGMRLFYIFFFLLALSMLVVVAIDIPYQIYDHTQKIRMTRQEVKEEFKQTE 237 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 G P VK R+R+ QR RRMM +VP ADV++ NP HY+VAL+YD++ M AP VVAKGA Sbjct: 238 GKPEVKQRVREQQREMTNRRMMENVPDADVVITNPAHYAVALKYDQSTMRAPTVVAKGAD 297 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 L+A RIRE+ EN++ +APPLARALY A++ Q+IPG LY AVA+VLA+V+Q + + Sbjct: 298 LLAARIRELAEENDILIFQAPPLARALYHSADLDQEIPGALYFAVAQVLAYVYQFQAAQR 357 Query: 355 AGGQRPVQPTHLPVPEALDFINEKPTHE 382 G P +P VP D E + E Sbjct: 358 RGWTPPQRP-EPEVPSGYDTGGEASSDE 384 >UniRef50_A6W0V5 Flagellar biosynthetic protein FlhB n=2 Tax=Marinomonas RepID=A6W0V5_MARMS Length = 378 Score = 295 bits (756), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 152/373 (40%), Positives = 246/373 (65%), Gaps = 9/373 (2%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 +++ +KTE+ + +L+ AR +G +PRS++L+S L+L+V + I+ G L R L+ + Sbjct: 4 NEDGSEKTESASSKKLQDARNKGNLPRSKDLSSALLLIVAAATIYGTGTLLVRDLAVLFD 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLP---LISGVVLVA-LISPVMLGGLVFSG 117 + + + D L +++ + E+++A++ L+ V+ VA ++ + LGGL FS Sbjct: 64 FNFLVERADVFD----LSRMVFHLYESVVAMMDSMVLLMAVLAVAGIVGSIALGGLNFSW 119 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 + L PK SK++P+ G+KRMFS Q+ EL K+I K LVG V+ + + P+ + L +S Sbjct: 120 EPLTPKLSKMSPIAGLKRMFSVQSLVELFKSIAKVTLVGIVSVLVVNYFLPETLGLTFQS 179 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 A+ + +D+V + V L + + DV FQ++SH +KL+M++Q+++DE+KQ EGDP Sbjct: 180 IELAIAHGIDIVIWSFVFVTLALALIAAIDVPFQVWSHKEKLKMTKQEVKDEYKQQEGDP 239 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 V+GRIRQMQR AA RMM+DVP ADVI+ NPTH+SVAL+YD+ +AP ++AKG +A Sbjct: 240 LVRGRIRQMQRQAAMNRMMSDVPSADVIITNPTHFSVALKYDQAGGAAPVLLAKGGDFIA 299 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 L+IRE+G ++P +++P LARA+Y H EIG +IP L+ VA++LA+V+QL+ R+ G Sbjct: 300 LKIREVGNHYDIPVIQSPALARAIYHHTEIGDEIPQGLFKVVAQLLAYVYQLRNARM-GA 358 Query: 358 QRPVQPTHLPVPE 370 RP +L VP+ Sbjct: 359 PRPETMPNLDVPD 371 >UniRef50_Q3J977 Flagellar biosynthetic protein FlhB n=3 Tax=Gammaproteobacteria RepID=Q3J977_NITOC Length = 377 Score = 283 bits (724), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 160/379 (42%), Positives = 245/379 (64%), Gaps = 12/379 (3%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D S ++TE PTP R E+AR++GQ+PRSREL++ ++LL + G L + L+ + Sbjct: 1 MADSSAQERTEQPTPKRQEEARKKGQVPRSRELSTTVLLLSSALGLVLIGEPLLQGLADL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + GL + + I +P + Q + EA+ + P ++ ++ AL +P+++GG FS +S Sbjct: 61 MRQGLQLERAQIFEPKAAILQFQQGVGEAVKIITPFLALTLIAALAAPLLMGGWSFSAQS 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L K+ KLNP G+KR+F Q G ELLKA++K +L+ V W P ++ L + + Sbjct: 121 LGFKWEKLNPAKGMKRIFGPQGGMELLKALIKFLLLSGVGCLLFWLFSPDLIALGRQPFV 180 Query: 180 TAMGN-----AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 A+ LVGL A L ++ VI D FQ ++H ++L+M+RQ++++E K+++ Sbjct: 181 PAVFQLAHLMGWSLVGLSASLALIAVI-----DAPFQGWNHTRQLKMTRQEVKEEHKETD 235 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 G+P +KGRIR++QR A RRMMA VP+ADV+V NPTHY+VAL Y+++K AP+VVAKG Sbjct: 236 GNPELKGRIRRVQREIASRRMMAAVPQADVVVVNPTHYAVALNYEQDKQGAPRVVAKGVD 295 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 VA++IR + A NNVP L AP L+RA+Y ++ Q+IP LY AVA+VLA+V QL++++ Sbjct: 296 QVAIKIRTVAAGNNVPVLSAPALSRAIYHSTKLDQEIPAGLYRAVAQVLAYVLQLRQYQR 355 Query: 355 AGGQRPVQ-PTHLPVPEAL 372 GG RP P P+PE L Sbjct: 356 RGGPRPQPIPNEFPIPEDL 374 >UniRef50_Q085L7 Flagellar biosynthetic protein FlhB n=70 Tax=Gammaproteobacteria RepID=Q085L7_SHEFN Length = 377 Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 151/372 (40%), Positives = 233/372 (62%), Gaps = 1/372 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 SD ++TE PT RLE++RE+GQ+ RS+EL + +LL G ++A+ L ++ Sbjct: 4 SDSGQERTEDPTSKRLEQSREKGQVARSKELGTAAVLLAASVGFSMTGPAIAKSLYNIMK 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + I D N + ++ E L+ I+ + V+ + ++LGG+ FS K+ Sbjct: 64 QIFSMERDQIFDTNSMFRVWGVVGSELAGPLISFIALLAFVSFLGNIVLGGMSFSVKAFM 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK SKLNP+ G KRMF Q EL K I K +V F L ++ ++ L ++ Sbjct: 124 PKGSKLNPMNGFKRMFGTQALVELTKGIAKFSVVALSAYFLLKFYFYDILTLSSDHLPGN 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + +A+DL+ +L+ ++ +V DV FQI++H K+L+M++Q+++DE+K +EG P VKG Sbjct: 184 VYHALDLLIWMFILLCSSMLLIVIIDVPFQIWNHKKQLKMTKQEVKDEYKDTEGKPEVKG 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQMQ+ A+RRMM +VP ADVIV NP HY+VA++YD ++ SAP ++AKG VA RIR Sbjct: 244 RIRQMQQEMAQRRMMTEVPNADVIVVNPEHYAVAVKYDVSRSSAPFLIAKGVDDVAFRIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 EI E+NV + APPLARA+Y ++ QQ+P L+ AVA+VLA+V+QL++++ G+RP Sbjct: 304 EIAREHNVAIVSAPPLARAIYHTTKVDQQVPEGLFTAVAQVLAYVFQLRQYQKGKGRRPK 363 Query: 362 Q-PTHLPVPEAL 372 P P+P+ L Sbjct: 364 PIPLKQPIPDDL 375 >UniRef50_B9ZRA6 Flagellar biosynthetic protein FlhB n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRA6_9GAMM Length = 383 Score = 280 bits (715), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 148/375 (39%), Positives = 235/375 (62%), Gaps = 6/375 (1%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 ++ +KTE PTP RL +A+E+GQ+PRSREL++ L+L+ + F G +L +L+ + Sbjct: 4 NESGQEKTEQPTPKRLREAKEKGQVPRSRELSTFLVLMAAGGFMTFFGPTLGGQLAEQTA 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + + D +L+L + I + LLPL +++ A+++P+++GG FS ++ + Sbjct: 64 GRFDIERDLAYDSSLLLPYLSEQIFMTLRTLLPLFGVLMVAAVLAPILIGGANFSWQAAK 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK SKLNPL G+KR+FS Q E K K +LV V LW +++ L E A Sbjct: 124 PKASKLNPLKGLKRIFSWQGLMEFGKTFAKFVLVAGVAMSVLWTFSDRLLMLGYEPLEQA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + +A L + V +I + D FQ+++H K+LRM+RQ+++DE+K+++G P VK Sbjct: 184 ITHAAQLALGTFVAVSAALILVAAIDAPFQMWNHQKQLRMTRQELKDEYKETDGKPEVKQ 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 +IRQ+Q+ A+RRMM +VPKADV++ NPTHY+VA+ Y+ ++M+APK+VAKG VA IR Sbjct: 244 KIRQLQQEMAQRRMMEEVPKADVVITNPTHYAVAITYEASRMAAPKLVAKGVDEVAASIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 + E+ + +EAP +ARA+Y ++ Q+IP L+ AVA +LA+V+QLKR Sbjct: 304 AVADEHKIIRVEAPRVARAIYFTTDLNQEIPNGLFVAVARILAYVYQLKR----SDADVA 359 Query: 362 QPTHLPVPEALDFIN 376 P LPVPE D+++ Sbjct: 360 MPDDLPVPE--DYLD 372 >UniRef50_Q3V867 Flagellar biosynthetic protein FlhB n=5 Tax=Legionella RepID=Q3V867_LEGPH Length = 383 Score = 275 bits (703), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 145/376 (38%), Positives = 242/376 (64%), Gaps = 7/376 (1%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILL-VGVSVIWFGGVSLARRLS 57 M+DE S +KTE P+ RL+++R++GQ+ RS++ + +ILL G+ FG L+ +++ Sbjct: 2 MADEEQSQEKTEQPSSKRLKESRKKGQVARSKDFNATVILLFTGLGFFIFGK-QLSLQIA 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 ++ FD I+ N L + L + + +++PL+ + +++L++P+++GG VFSG Sbjct: 61 SIMQQAFDFDRDILVTGNNSLENLFQLTKSGLWSVVPLLLVIFILSLLAPLLMGGWVFSG 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 +S+QPKFS+LN L G+KRM S + E+LKA LK +LV S + L P ++ L ++ Sbjct: 121 QSIQPKFSRLNVLKGLKRMISLKGFVEMLKAFLKFVLVASASILVLRSQVPLLLEL-GKA 179 Query: 178 PI-TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 P+ A+ + + ++ +L+ +I + DV FQ++ H K ++M++Q+++DE+K++EG Sbjct: 180 PLEIAITSGVMILLKSFVLISASLILIAAIDVPFQLYEHSKSIKMTKQELKDEYKETEGK 239 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P VK IR+ Q+ ARRRMM++VPKADVI+ NPTHY+VAL Y + AP V+AKG LV Sbjct: 240 PEVKSAIRRAQQETARRRMMSEVPKADVILTNPTHYAVALSYQKKGKKAPVVIAKGKNLV 299 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 A +I ++ E+ +P + P LARA+Y ++ +IP LY AVA+VLA+++QL R R Sbjct: 300 AFQISKVAKEHKIPIISVPALARAIYFSTKLNAEIPRGLYVAVAQVLAYIFQL-RDRQRY 358 Query: 357 GQRPVQPTHLPVPEAL 372 +P ++P+P L Sbjct: 359 DYKPEILQNVPIPPEL 374 >UniRef50_Q1I766 Flagellar biosynthetic protein FlhB n=22 Tax=Gammaproteobacteria RepID=Q1I766_PSEE4 Length = 380 Score = 275 bits (703), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 159/374 (42%), Positives = 240/374 (64%), Gaps = 4/374 (1%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S+ DKTE PT R ARE+G+I RS+EL ++ + L G + G +A L ++ Sbjct: 4 SESGQDKTEEPTDKRKRDAREKGEIARSKELNTVAVTLAGAGGLLAFGGQMAETLMTLMR 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 A +I D + ++ + A+ ++ P++ + +++ ++P+ LGG +FSG LQ Sbjct: 64 ANFTLTREVIVDERSMGAFLLASGKMAIWSVQPVMILLFVISFVAPIALGGFLFSGSLLQ 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PKFS++NPL GIKRMFS ELLKAI K +++ V L ++ + E A Sbjct: 124 PKFSRMNPLAGIKRMFSLHALTELLKAIAKFLVILVVALVVLASDRQALLSIANEPLEQA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + +A+ +VG AL + G++ + DV FQ++ KKL+M++Q++RDE+K SEG P VK Sbjct: 184 VIHAVQVVGWSALWMAAGLLLIAAADVPFQLWQAHKKLKMTKQEVRDEYKDSEGKPEVKQ 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYD-ENKMSAPKVVAKGAGLVALRI 300 RIRQ+QR A++RRMMA VP+ADVI+ NPTHY+VALQYD E +AP ++AKG +AL++ Sbjct: 244 RIRQLQREASQRRMMAAVPEADVIITNPTHYAVALQYDPEKGGAAPLLLAKGTDFLALKM 303 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 REIG E+ V LE+P LARA+Y E+ ++IP LY AVA+VLA+V+Q++++R G+ P Sbjct: 304 REIGVEHKVQILESPALARAIYYSTELEEEIPAGLYLAVAQVLAYVFQIRQYRAGKGKAP 363 Query: 361 VQP--THLPVPEAL 372 +P LP+PE L Sbjct: 364 -EPLKKDLPIPEDL 376 >UniRef50_B8EA03 Flagellar biosynthetic protein FlhB n=22 Tax=Gammaproteobacteria RepID=B8EA03_SHEB2 Length = 376 Score = 275 bits (702), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 146/364 (40%), Positives = 230/364 (63%), Gaps = 1/364 (0%) Query: 12 PTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSII 71 PT RLE+ARE+GQI RS+EL + +L+ + G SLA L+ + D + I Sbjct: 13 PTGRRLEQAREKGQIARSKELGTAAVLISAACGFYMLGPSLATSLTRVFETVFTMDRAQI 72 Query: 72 NDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLP 131 D + ++ E + ++ +V+VA I V LGG+ FS +++ PK SK++P Sbjct: 73 FDTEEMFNVWGVVASEIAWPMAKIMLLIVVVAFIGNVALGGMNFSTQAMMPKASKMSPAA 132 Query: 132 GIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGL 191 G+KRMF Q EL K I K +V L ++ +M L ++ + +A+DL+ Sbjct: 133 GLKRMFGVQALVELTKGIAKFSVVAFSAYLLLSFYFNDIMLLSSDHLPGNVYHALDLLVW 192 Query: 192 CALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAA 251 +L+ ++ +V DV FQI++H K+L+M++Q+++DE+K +EG P VKGR+RQMQR A Sbjct: 193 MFILLCSSILLIVVIDVPFQIWNHNKQLKMTKQEVKDEYKDTEGKPEVKGRVRQMQRELA 252 Query: 252 RRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPT 311 +RRMMA+VP ADVIV NP H++VA++YD + +AP V+AKG VA +IREI E+N+ Sbjct: 253 QRRMMAEVPNADVIVVNPEHFAVAIKYDVQRSAAPFVIAKGVDDVAFKIREIAREHNIAI 312 Query: 312 LEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQ-PTHLPVPE 370 + APPLARA+Y ++ QQIP L+ AVA++LA+V+QL++++ G++P+ P + P+P+ Sbjct: 313 VSAPPLARAIYHTTKLDQQIPEGLFTAVAQILAYVFQLRQYQKGRGRKPIPVPLNQPIPD 372 Query: 371 ALDF 374 L + Sbjct: 373 ELKY 376 >UniRef50_C5S862 Flagellar biosynthetic protein FlhB n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S862_CHRVI Length = 384 Score = 273 bits (699), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 144/351 (41%), Positives = 232/351 (66%), Gaps = 2/351 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 ++ +++EAPT RL ++RE+GQ+ RSREL + +IL+VG + + F G +A R+S ++ Sbjct: 4 NENGQERSEAPTAKRLRESREKGQVARSRELNTFIILIVGGAFLLFLGGGMAARISQLMI 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 G + +I D L++ + L+ A+L L PL ++++AL+ P+++GGL FS ++L Sbjct: 64 DGWTLERGLIFDEGLLVPHLQHLLGRALLILAPLFGLLMVIALMGPILVGGLNFSTQALM 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT- 180 PKFSK+NP+ G+KR+FS Q EL+K + K LVG V + W ++ L E P+ Sbjct: 124 PKFSKVNPISGLKRVFSVQGLMELVKGLGKFGLVGIVATLAIMSIWGNLLTL-GELPVEQ 182 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ + + L+ ++ + DV FQ+++H K+LRM+ Q+I+DEFK++EG P VK Sbjct: 183 AIVQTVHMAAWLFLIAAAALLVVAAIDVPFQVWNHQKQLRMTLQEIKDEFKETEGKPEVK 242 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GRIRQ+Q ++RRMM++VPKADV++ NPTHY+VA+ Y M AP+++AKG VA I Sbjct: 243 GRIRQLQHEMSQRRMMSEVPKADVVITNPTHYAVAISYVPAIMPAPRLLAKGTDAVAQAI 302 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 R + E+ + +EAP +ARA+Y ++ Q+IP L+ AVA +LA+V+Q++R Sbjct: 303 RALAEEHRIVRVEAPRVARAIYFTTDLNQEIPNGLFVAVARILAYVYQIRR 353 >UniRef50_C3K0I5 Putative flagellar biosynthesis-related protein (Flagellar biosynthetic protein flhb) n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K0I5_PSEFS Length = 378 Score = 271 bits (693), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 153/372 (41%), Positives = 236/372 (63%), Gaps = 2/372 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S+ DKTE PT R + +RE+G+I RS+EL ++ ++ G + G LA L ++ Sbjct: 4 SESGQDKTEDPTEKRKKDSREKGEIARSKELNTVATMMAGSGALLIYGGGLALDLMELMK 63 Query: 62 AGLHFDHSIINDPNLILGQIILLI-REAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 ++ +P+ +GQ +L + A+LA+ P++ ++L ALI PV LGG +F+ S+ Sbjct: 64 HNFALPREVLLNPD-AMGQYLLHSGKIAILAVQPILITLLLAALIGPVALGGWLFAAGSM 122 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PKFS++NP G+KRMFSA+ ELLKA+ K IL+ V L ++R+ E + Sbjct: 123 APKFSRMNPGAGLKRMFSAKALVELLKALAKFILILFVALMVLSSDIDDLLRIAHEPLES 182 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ +++ +VG AL + G+I + D Q++ KKL M++Q++RDE K EG P VK Sbjct: 183 AIIHSVQVVGWSALWMAAGLIIIAAVDAPIQLWESHKKLLMTKQEVRDEHKDQEGRPEVK 242 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIRQ+QR ++R+MMA VP ADVI+ NPTHY+VAL+YD K AP ++AKG+ AL+I Sbjct: 243 QRIRQLQREMSQRKMMASVPDADVIITNPTHYAVALKYDPEKGGAPMLLAKGSDFTALKI 302 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 REI +++ LE+P LAR+++ ++ Q+IP LY AVA+VLA+V+Q++++R G+RP Sbjct: 303 REIAVAHDILLLESPELARSIFYSTDLDQEIPAGLYLAVAQVLAYVYQIRQYRSGKGKRP 362 Query: 361 VQPTHLPVPEAL 372 LP+P L Sbjct: 363 DPLKDLPIPPEL 374 >UniRef50_A1VY54 Flagellar biosynthetic protein FlhB n=27 Tax=Epsilonproteobacteria RepID=A1VY54_CAMJJ Length = 368 Score = 268 bits (686), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 137/362 (37%), Positives = 219/362 (60%), Gaps = 12/362 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ E +KTE PT ++E AR+EG +P+S++ +++ L++GV++ F + R+ + Sbjct: 1 MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTITLFMMSFMGERIVNLY 60 Query: 61 SA-----GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVF 115 G+ FD II +I I E ++ L P++ +++ ++ +M G +F Sbjct: 61 RYYQSFIGVEFDLRIIQ------AIMIKSIFEVLIILAPIVLSIMIAGVLGNIMQFGFIF 114 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 + K + P K+NPL G+K +FS + E +K ILK +V ++ L ++ R+ Sbjct: 115 TTKPIMPNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFIVLLKFMQELPRVEL 174 Query: 176 ESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 + +T + D + A +V++ + + DVF F + K LRMS+Q+I+DE+KQ EG Sbjct: 175 YTMVTQLAWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGLRMSKQEIKDEYKQMEG 234 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DP VKGRIR++Q AARRRM+ DV ADV++ NPTHY+VA++YD +K AP+VVAKG Sbjct: 235 DPQVKGRIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIRYDTSKEQAPRVVAKGVDF 294 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL-KRWRL 354 +ALRI+++ ENNV E PPLAR LY+ ++ IP +++ AVAEVL +V+ + RL Sbjct: 295 LALRIKQVAYENNVVVYENPPLARELYKACDVNDLIPREMFKAVAEVLGFVYNTNNKSRL 354 Query: 355 AG 356 AG Sbjct: 355 AG 356 >UniRef50_A0L3J7 Flagellar biosynthetic protein FlhB n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L3J7_MAGSM Length = 355 Score = 267 bits (682), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 156/362 (43%), Positives = 224/362 (61%), Gaps = 17/362 (4%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLL-------ILLVGVSVIWFGGVSL 52 M+DE D KTE PT RL +R +GQ+ S+E+ + L + LV + +W +L Sbjct: 1 MADEDKDSKTEEPTSKRLSDSRNKGQVVSSKEVPTALLMLAALAVFLVQGNELW---QAL 57 Query: 53 ARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGG 112 R++ LS + D +LI +II R ++ L P + ++VA+IS ++ G Sbjct: 58 QRKMHFFLSGQIS-DDITPTGVSLIFNEII---RAVVMDLAPFFALFLVVAIISGLIQHG 113 Query: 113 LVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMR 172 + + + L PKFSK+NPL G+KR+FS ++ E K+I+K ++ + ++ Q++ Sbjct: 114 WLITFEPLMPKFSKVNPLQGLKRLFSVRSLVEAFKSIVKIFVISFAVYLAMRNNIDQILG 173 Query: 173 LMAESPITAMGNAMDLVGLCALL-VVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFK 231 L A++ IT M L L V L + + D +Q F ++K LRMS+Q+I+DE K Sbjct: 174 L-ADTTITEFTTLMFKDSLEILWRVTLAFLLIAVLDFIYQKFDYIKGLRMSKQEIKDEMK 232 Query: 232 QSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAK 291 Q EGDP +KGRIRQ+QR A+ RMM +VPKADVI+ NPTHY+ ALQY +MSAPK+VAK Sbjct: 233 QMEGDPLLKGRIRQIQRELAQSRMMQEVPKADVIITNPTHYACALQYTPGQMSAPKLVAK 292 Query: 292 GAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 G GL+A RIRE+ ENN+P +E PPLAR LYR E+ Q IP +L+ AVAEVLA+V+ LK Sbjct: 293 GKGLIAARIRELADENNIPRVENPPLARTLYRDVELEQFIPPELFKAVAEVLAYVFSLKN 352 Query: 352 WR 353 R Sbjct: 353 RR 354 >UniRef50_Q1NP88 Flagellar biosynthetic protein FlhB n=2 Tax=Deltaproteobacteria RepID=Q1NP88_9DELT Length = 356 Score = 266 bits (681), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 152/360 (42%), Positives = 226/360 (62%), Gaps = 18/360 (5%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++E +KTE PT RL +AR +G + +S E+ S +LL GV V++F G + R++G Sbjct: 1 MAEEQSGQEKTEKPTERRLLEARNKGDVAKSMEVPSAAVLLAGVIVLYFTGEYMFNRVTG 60 Query: 59 MLSAGLHFDHSI----INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLV 114 M+ L H I + PN I Q++LLI L PL+ V L AL + + G + Sbjct: 61 MMQFYLSNLHDIEISAASMPN-ITRQVMLLIYTV---LWPLMLTVFLAALAANYLQVGFL 116 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 F+ + + PK K++PL G+ R+FS QT K+I K LVG + + P+++ L Sbjct: 117 FTAEKITPKLEKIDPLKGLGRLFSKQTLNNAFKSIAKFSLVGYIAYSEIIRAMPEILPLA 176 Query: 175 AESP----ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEF 230 ++P + + A + CA+L +L + D FQ + ++K++M++QD++DE Sbjct: 177 DKAPYPILVFMVETAFWIFLKCAVLFILIAL----IDYAFQRWQFMEKMKMTKQDMKDES 232 Query: 231 KQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVA 290 KQSEGDPHVKGRIR +Q A++RMMA+VPKADV+V NPTH +VA++YD M AP+V+A Sbjct: 233 KQSEGDPHVKGRIRSIQMEMAKKRMMAEVPKADVVVTNPTHLAVAIKYDALTMKAPEVLA 292 Query: 291 KGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 KGAG+VA +I+E+ E+ VP +E PLA+ALY++ EIG IP L+ AVAEVLA+V+ LK Sbjct: 293 KGAGVVANKIKEVAREHQVPVVEDKPLAQALYQNVEIGGSIPENLFQAVAEVLAYVYNLK 352 >UniRef50_A0Z390 Flagellar biosynthetic protein FlhB n=3 Tax=unclassified Gammaproteobacteria RepID=A0Z390_9GAMM Length = 384 Score = 264 bits (675), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 142/375 (37%), Positives = 232/375 (61%), Gaps = 16/375 (4%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGV----SLARRLSGMLSA 62 ++TE PT RL++ARE+GQ+ RSREL +LL+LL +W G ++ R +G L+ Sbjct: 9 ERTEEPTAKRLQQAREKGQVARSRELNTLLMLLPCAVALWLTGEFAMDAVTRLFTGALTP 68 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 + ++ LG ++ + ++P ++ V VAL+ P ++GGL+FS KS+ P Sbjct: 69 PSE-AMKVTSEVAPFLGATLM---SGLEMIVPFLALTVFVALLGPSVMGGLIFSLKSMSP 124 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 K++P+ G R+FS ++ EL+K++LK LV V L ++M L++ + Sbjct: 125 GLDKIDPIKGFGRIFSRKSLLELVKSLLKFFLVSGVAVLVLLSFEREVMGLISLPVGEGI 184 Query: 183 GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 A ++ L + + +I +V DV FQ++ H +KLRM++Q+++DE K+++G+P +KG+ Sbjct: 185 AQAGRMIMLTLIFLSASLILVVAIDVPFQLWDHTRKLRMTKQEVKDEMKETDGNPEMKGK 244 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 IRQ QR A RRM+ADVP ADV++ NPTH+SVAL+YD+ +AP+V+AKGA +A++IR Sbjct: 245 IRQKQREIADRRMLADVPTADVVITNPTHFSVALKYDQEGNTAPRVLAKGADHMAMQIRH 304 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQ 362 I +++ E PPLARAL+ E G +IPG L+ AVA VLA+V+ L++ + Sbjct: 305 IARAHDIVIYEEPPLARALFASTEAGDEIPGNLFLAVARVLAYVFHLRKAQATD------ 358 Query: 363 PTHLPVPEALDFINE 377 ++P PE+++ E Sbjct: 359 --YVPRPESIELPEE 371 >UniRef50_B8FK32 Flagellar biosynthetic protein FlhB n=4 Tax=Bacteria RepID=B8FK32_DESAA Length = 358 Score = 260 bits (664), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 138/358 (38%), Positives = 228/358 (63%), Gaps = 10/358 (2%) Query: 1 MSDE-SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D ++DKTE PTP + + AR++GQ+ +SR+L+S+++L+ G+ +++ G + ++ + Sbjct: 1 MADSPNEDKTEQPTPKKRDDARKKGQVAKSRDLSSVVVLMAGLGIMYMFGPYMHYHITSL 60 Query: 60 LSAGLHFDHSI--INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 + D S + + N LG+ ++RE + L P+++GV +V S + G FS Sbjct: 61 MENIFTTDVSAWGVEEIN-TLGR--EMVREFLFILAPILAGVFVVGFASAAVQVGFYFSW 117 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 ++ PKFSK+NP+ G RMFS Q EL K++ K +VG ++ + ++ L Sbjct: 118 EAAAPKFSKINPISGFGRMFSKQALVELAKSLAKLFIVGFISYLTIEAEMDNLILLGQVD 177 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPM--VGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 + + ++ L + +G+I + D FQ + H ++L+M++Q+++DE+KQ++G Sbjct: 178 AANTLAYVLKII--LKLFIRVGIIMVFVAVLDFAFQKWHHEQQLKMTKQEVKDEYKQTDG 235 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DP VK RIR++Q AARRRMM +VPKADV+V NPTH ++A++Y+ M AP +VAKGAG Sbjct: 236 DPMVKARIRRIQMEAARRRMMEEVPKADVVVTNPTHLALAIKYNALTMGAPLIVAKGAGP 295 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +A +I+E+ EN+VP +E LARALY+ +IG ++P LY AVAEVLA+V+ LK+ R Sbjct: 296 IAQKIKEVARENDVPIVENKELARALYKVVDIGDEVPVALYEAVAEVLAYVYGLKQNR 353 >UniRef50_D0KYP0 Flagellar biosynthetic protein FlhB n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYP0_HALNC Length = 379 Score = 260 bits (664), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 151/363 (41%), Positives = 213/363 (58%), Gaps = 28/363 (7%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 ++ +KTE P+ RL +ARE+GQ+ RSREL SL + V G + RL M Sbjct: 4 NENGQEKTEEPSEKRLREAREKGQVARSRELGSLALTAGSAIVFLVMGGHMLSRLEQMFR 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + I DP + ++ L E LALLP V++A+ S +++GG FS ++L Sbjct: 64 HAFTLSRAEIMDPATMFHRLALSFSEGFLALLPFFLAAVVLAVSSTLLVGGWNFSTQALA 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVT-GFFLWHHWPQMMRLMAESPIT 180 P+F++LNPL G KRMFS ++ ELLK + K L+ ++ G F + M E Sbjct: 124 PQFNRLNPLSGFKRMFSMKSLVELLKTLAKFFLIAAIAIGLF------EAM----EKDFV 173 Query: 181 AMGNAMDLVGLCALLVVLGVI-------------PMVGFDVFFQIFSHLKKLRMSRQDIR 227 +G L+GL A L G + + DV FQ++ + K LRM+RQ++ Sbjct: 174 GLG----LMGLEAGLARAGTLLSWSFLGLSLGLLVVAMIDVPFQMYEYKKGLRMTRQEMI 229 Query: 228 DEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPK 287 DE+K+ EG P VK +IRQ+QR A+RRMM VP ADVI+ NPTH+SVAL+Y N +AP Sbjct: 230 DEYKEVEGKPEVKQKIRQLQRQMAQRRMMEAVPTADVIITNPTHFSVALKYQPNSDAAPM 289 Query: 288 VVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW 347 VVAKGA +A+ IR+I N+VP E+P LAR+L+ H E+G IP LY AVA+VLA+V+ Sbjct: 290 VVAKGADEMAMTIRKIANANHVPLFESPQLARSLFAHVEVGDAIPSGLYVAVAQVLAYVF 349 Query: 348 QLK 350 Q+K Sbjct: 350 QMK 352 >UniRef50_D0I461 Flagellar biosynthesis protein FlhB n=2 Tax=Vibrionaceae RepID=D0I461_VIBHO Length = 375 Score = 258 bits (658), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 146/377 (38%), Positives = 232/377 (61%), Gaps = 9/377 (2%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MSD S DKTE P+ ++ KAREEG +PRSREL + L+++ ++ ++ + + Sbjct: 1 MSDSSAQDKTERPSEQKIRKAREEGNLPRSRELVTALMMVASALLLSAFSSAIHHTIVSV 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLA---LLPLISGVVLVALISPVMLGGLVFS 116 L+ D I P+ +G+ LL + A+LA L PL + ++LV++ + ++ GG S Sbjct: 61 SEMTLNIDKDTIFSPDK-MGE--LLWQSAILATQALAPLFALIMLVSIGANLLRGGWNIS 117 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 K++ PK SKLNPL GIKR+FSA + EL+K+ILK +G + + H+ +++ L Sbjct: 118 TKAMMPKLSKLNPLSGIKRIFSANSLVELIKSILKVTFIGGALYWLINHYLNEIIALQHT 177 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 A+ +DL+ + L ++ + ++ + + ++KKL+M++Q++++E K +EG Sbjct: 178 RLSAAIPAFLDLLWTGLFVYGLVLLFIAVLEMPYSSYEYIKKLKMTKQEVKEEHKNTEGR 237 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P +K RIRQ+QR ++R VP ADVI+ NPTHY+VAL+YD +K +AP V+AKG Sbjct: 238 PEIKARIRQLQRQMSQRAFAKTVPTADVIITNPTHYAVALKYDLSKANAPFVIAKGVDQA 297 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA- 355 AL+IR+I ++ +P +E PPLARA+Y Q+IP QLY AVA VL +V+QL +++ Sbjct: 298 ALQIRQIAQQHGLPVVEVPPLARAVYYSTNEWQEIPAQLYVAVAHVLNYVFQLDQYKKGR 357 Query: 356 GGQRPVQPTHLPVPEAL 372 RP PT + VPE L Sbjct: 358 QSNRPTFPT-VVVPEEL 373 >UniRef50_A2SKE1 Flagellar biosynthesis protein n=2 Tax=Burkholderiales Genera incertae sedis RepID=A2SKE1_METPP Length = 387 Score = 256 bits (655), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 147/383 (38%), Positives = 236/383 (61%), Gaps = 2/383 (0%) Query: 1 MSDE-SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D+ + D+ + +L+KARE+GQ+PRSR+L + G++++ + ++ + Sbjct: 1 MADQGAQDRNLPASERKLKKAREDGQVPRSRDLGHFAAVAAGIALLAAMAPTATGWMTRL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L +GL FD +N + ++ L + A+LP+ + +VL AL S + +GG F+ K+ Sbjct: 61 LQSGLRFDAGTLNGTASMSERLAELGVQFAWAMLPIGAVMVLAALASSLTVGGWNFTLKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++PKFSKLNPL G+ RM SA + +++ + +++G V F+L + Q + Sbjct: 121 IEPKFSKLNPLTGLPRMLSADRLVDTVRSCVLALVIGLVGAFYLSQNVFQFTSTLTLPLP 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 TA+ A + V + ++L + DV Q F H K+L+MS Q+++ E K++EG+ V Sbjct: 181 TALAQAGNDVLYGLMFLLLALAVFALIDVPLQRFQHAKRLKMSHQEMKQEHKENEGNVEV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +++ R A RRM+A VPKAD++V NPTHY+VAL+Y+E + AP+VVAKGA L+A+R Sbjct: 241 KAKVKARMREMANRRMLAAVPKADLVVMNPTHYAVALKYEEGRGGAPRVVAKGADLMAMR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IR++ ++ VP L+AP LARALY HAE+ ++IP LY AVA+VLA+V+QL+ Sbjct: 301 IRDLAKDSKVPVLQAPVLARALYAHAELDREIPIALYTAVAQVLAYVYQLRAALAGKAPL 360 Query: 360 PVQPTHLPVPEALDFINEKPTHE 382 P + LPVP LD N KP+ + Sbjct: 361 PGELPELPVPAELDPHN-KPSSD 382 >UniRef50_B4RUM4 Flagellar biosynthesis protein n=3 Tax=Alteromonadales RepID=B4RUM4_ALTMD Length = 374 Score = 256 bits (655), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 148/373 (39%), Positives = 230/373 (61%), Gaps = 13/373 (3%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 +S +KTE PT +L+ AR++GQ+ RSREL++ L+L+V + F G +A + + Sbjct: 3 DSSEKTEDPTGKKLDDARKKGQLARSRELSTTLVLIVSAVMFLFVGGWIAESVFKLTRRM 62 Query: 64 LHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALIS----PVMLGGLVFSGKS 119 D + G EA A+ P + ++VA+I+ + LGG F+ + Sbjct: 63 FILSRDETYDITHMFGAW----GEAFSAVGPAVLLYMVVAMIAGIYGSIALGGFNFTWEG 118 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTI-LVGSVTGFFLWHHWPQMMRLMAESP 178 +PK SK++P+ G KRMF ELLK+I K + ++G G L+ + + L E Sbjct: 119 AKPKGSKMSPIQGFKRMFGTNGLVELLKSIAKVVVIIGMAIGALLFFE-DEALHLDMELY 177 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + +AMD++ L++V G+IP+ DV +Q++ H K+++M++Q+++DE K +EGDP Sbjct: 178 PGNLFHAMDILKWAFLILVCGMIPIALIDVPYQMYKHNKEMKMTKQEVKDERKNAEGDPM 237 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VKGRIR++Q AA +RMM +VP+ADV+V NPTH+SVA++YDE + AP VVAKGA +A+ Sbjct: 238 VKGRIRRLQYQAATKRMMQEVPQADVVVTNPTHFSVAIKYDEKGIRAPVVVAKGADELAM 297 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 IR+I N+VP + +P LARA++ E+ +IP L+ AVA+VLA V+QLK R G+ Sbjct: 298 HIRKIATANDVPLIPSPMLARAIFYSTEVDDEIPNALFMAVAQVLAHVYQLKAHRAGKGK 357 Query: 359 RPVQP--THLPVP 369 RP +P LP+P Sbjct: 358 RP-KPLKRDLPIP 369 >UniRef50_B2SN53 Flagellar biosynthetic protein FlhB n=14 Tax=Xanthomonadaceae RepID=B2SN53_XANOP Length = 376 Score = 256 bits (655), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 147/367 (40%), Positives = 231/367 (62%), Gaps = 10/367 (2%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRL----S 57 S++ ++TE PT RL +ARE+G IP+SREL++ + GV F ++LAR + + Sbjct: 4 SEDGGERTELPTEKRLREAREQGNIPQSRELSTAAVFGAGV----FALMALARGIGDGAT 59 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 + L D ++ +P + G L+ + + +LPLI + L P+++ GL FSG Sbjct: 60 AWMETALSPDPTMRENPMALFGHFGDLLLQLLWVMLPLIGICLAAGLAGPLLMSGLHFSG 119 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 K++ P +KLNP G+KRM+ + + AEL+K++L+ + VG F + P + L+++ Sbjct: 120 KAIMPDLTKLNPANGLKRMWGSNSLAELVKSVLRLLFVGLAASFCISKSLPGLRSLVSQP 179 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 A+GN +D ++ + D +Q ++ ++KL+M+R++I+ E K+SEG P Sbjct: 180 LEQAVGNGLDFTKSLLFYTAGALVLLAAIDAPYQKWNWMRKLKMTREEIKREMKESEGSP 239 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 VKGRIRQMQ ++R+MM VPKADV++ NPTHY+VAL+Y+ KM AP VVAKG +A Sbjct: 240 EVKGRIRQMQMQMSQRQMMEAVPKADVVLMNPTHYAVALKYEGGKMRAPIVVAKGVDEMA 299 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 RIRE G ++ V + APPLARALYR A++G++IP +LY+ VA+VL++V+QL+ W GG Sbjct: 300 FRIREAGEQHRVAIVTAPPLARALYREAQVGKEIPVRLYSVVAQVLSYVYQLRGWN--GG 357 Query: 358 QRPVQPT 364 P P+ Sbjct: 358 PMPELPS 364 >UniRef50_B1HQX6 Flagellar biosynthetic protein n=17 Tax=Bacillaceae RepID=B1HQX6_LYSSC Length = 362 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 132/354 (37%), Positives = 224/354 (63%), Gaps = 13/354 (3%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE TP + + AR++GQ+ +S+++TS +++L+ ++F SL L Sbjct: 13 SGEKTEKATPKKRQDARKKGQVVKSQDVTSAIVMLMVFIFLFFFAGSLRDELLAFFRQT- 71 Query: 65 HFDHSIINDPNLILGQIILLIREAMLAL----LPLISGVVLVALISPVMLGGLVFSGKSL 120 F H+I L + ++ L + ++ + +P+++ V+ AL + G +F+ + + Sbjct: 72 -FIHNI-RIETLTIDSVMHLFIDTLIQMAFIIVPIMAIAVVGALAGNFLQFGFLFTLEPM 129 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP-- 178 + K++P+ G+KR+FS + ELLK++LK +GSVT +W + P+++ L +SP Sbjct: 130 KFDLKKMDPIKGLKRIFSVKAIVELLKSVLKIGFIGSVTTIIIWTNLPEVLALSFKSPWI 189 Query: 179 -ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + +G + ++G+ A LV+L V + D +Q F + K L+MS+QDI+DE+K SEGDP Sbjct: 190 TLITVGKLVGIMGIAASLVLLCVSIL---DWLYQKFDYEKNLKMSKQDIKDEYKNSEGDP 246 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K +I+Q QR A RRMM+++P ADV++ NPTHY++AL+YDE M AP+V+AKG +A Sbjct: 247 LIKSKIKQRQREMAMRRMMSEIPSADVVITNPTHYAIALKYDEESMDAPRVIAKGTDFIA 306 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +I+ I E++V +E PLARA+Y EIG +P + + AVAE+LA+V+++KR Sbjct: 307 QKIKLIAKEHDVIMVENRPLARAMYDQVEIGDPVPEEFFKAVAEILAYVYRIKR 360 >UniRef50_B0TNN8 Flagellar biosynthetic protein FlhB n=7 Tax=Shewanella RepID=B0TNN8_SHEHH Length = 377 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 138/372 (37%), Positives = 228/372 (61%), Gaps = 4/372 (1%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVS-LARRLSGMLS 61 D KTE TP +L+KARE+GQ+PRS++L S L++G S++ +A +++ M Sbjct: 5 DSGQSKTEKATPQKLKKAREQGQVPRSKDLASS-ALIIGCSLLLTTTADWIAAKVAAMTR 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + F + +++P ++ + + E + L PL V L+A+++ M GG +F+ + Sbjct: 64 INMSFTKAQLDEPGMMARHLAYSLLEVLNILGPLFLMVALIAMVAGAMPGGPIFNFNNAN 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT- 180 K+S+++P+ G+ RM S ++ EL+K+ILK +L+ + FL ++ +M + ++ PI Sbjct: 124 FKYSRIDPIAGLGRMASVKSLVELVKSILKIVLLIGIMLLFLQKNFQALMAV-SQLPIDE 182 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ ++++ L + LG++ + DV +Q + H K+LRMS Q+++DE+KQ +G P VK Sbjct: 183 AVTRGIEMLSLAMFYMGLGLLVITFIDVPYQYWHHHKELRMSLQEVKDEYKQQDGKPEVK 242 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +IRQMQ+ +R R VPKADV++ NP+HY+VAL+YD NK AP V+AKG +AL + Sbjct: 243 AKIRQMQQRISRSRADVSVPKADVLLVNPSHYAVALKYDMNKADAPYVLAKGTDELALYM 302 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 R+I N+V LE PPL RA+Y ++ QQIP L+ A+A VL +V QL+ R +P Sbjct: 303 RDIAKRNDVEVLELPPLTRAIYYSTQVEQQIPSGLFIAIAHVLTYVMQLRAARQGQQAKP 362 Query: 361 VQPTHLPVPEAL 372 H +P+ L Sbjct: 363 EPLPHFYIPKNL 374 >UniRef50_A6F9S1 Flagellar biosynthetic protein n=1 Tax=Moritella sp. PE36 RepID=A6F9S1_9GAMM Length = 375 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 142/378 (37%), Positives = 228/378 (60%), Gaps = 11/378 (2%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSREL-TSLLILLVGVSVIWFGGVSLARRLSG 58 MSD S +KTE PT + + A++EGQI RS+EL T+ LIL+ G S+ WF S + S Sbjct: 1 MSDSSTQEKTEEPTQKKRDDAKKEGQIARSKELATAGLILISGSSLTWFAP-SFSAFFSE 59 Query: 59 MLSAGLHFDHSIINDPN---LILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVF 115 + + + + DP ++LG+ I+ + L+P I + L + +M GGL+F Sbjct: 60 LFTIQMQLTREVTRDPQYMVVMLGEAII---NMLKVLIPFILVLNLTTFLLGIMPGGLIF 116 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 K++QPK SK+NP+ G+KRM S T EL+K+ILK L+ L HW ++ MA Sbjct: 117 VLKNIQPKISKMNPISGLKRMVSKDTIIELIKSILKISLISFTLYKVLSLHWHELAA-MA 175 Query: 176 ESPI-TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 + P+ + NAM ++ + + ++ + D+ +Q +S KKL+MS+Q+I+DE K +E Sbjct: 176 QMPLLNVLNNAMYIMSITLSFMGAALLIVAAIDLPYQKWSMNKKLKMSKQEIKDEHKGAE 235 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 G P +K +I+Q+QR +++R+ + VP AD ++ NPTHY+VA++YD + AP +VAKG Sbjct: 236 GSPEIKQKIKQIQRQMSQKRIDSAVPTADFVIVNPTHYAVAVKYDAARSQAPFIVAKGVD 295 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 +ALRI++I +++ +EAP L RA+Y ++ Q+IP QLY AVA +L + QL +R Sbjct: 296 TMALRIKKIAESHDLDIIEAPELTRAIYHSTQVDQEIPAQLYTAVAYILTHIMQLSAYRK 355 Query: 355 AGGQRPVQPTHLPVPEAL 372 G++P + +P L Sbjct: 356 GRGKQPNTLPNFEIPATL 373 >UniRef50_P35538 Flagellar biosynthetic protein flhB n=10 Tax=Bacillales RepID=FLHB_BACSU Length = 360 Score = 254 bits (649), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 138/355 (38%), Positives = 218/355 (61%), Gaps = 20/355 (5%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSREL-TSLLILLVGVSVIWFGGVSLARRLS---GMLSA 62 +KTE TP + + R++GQ+ +S ++ T++ +L++ +S+I G R LS + Sbjct: 13 EKTEKATPKKRKDTRKKGQVAKSSDVNTAVSLLVIFLSLIAIGPYMRDRLLSFIETFYTE 72 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 L S N L + L+++ + L P++ ++ ++S M G +FS + +QP Sbjct: 73 SLTMKLSESNVHTLFVS----LLKDMGMILAPILLVALVAGVVSNYMQVGFLFSAEVIQP 128 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 K KL+P+ G KR++S + EL+K+ILK ++VG LW H+ +++RL +P A+ Sbjct: 129 KLEKLDPIKGFKRIYSMRAIVELIKSILKIVVVGFAAFAVLWLHYGEILRLPLLTPEEAL 188 Query: 183 GNA------MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 M L G ALL+ + G D +Q F + K ++MS+QDI+DE+K+SEGD Sbjct: 189 SFVSKLTLWMGLSGAGALLI------LAGLDYLYQRFDYEKNIKMSKQDIKDEYKKSEGD 242 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P +K +I+Q QR A RRMM +VPKADVI+ NPTHY++AL+YDE KM AP +VAKG + Sbjct: 243 PIIKSKIKQRQREMAMRRMMQEVPKADVIITNPTHYAIALKYDEEKMDAPYIVAKGVDHL 302 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 AL+IR+I E++V +E PLARALY EI Q +P + + +AE+LA+V++ K+ Sbjct: 303 ALKIRKIAKEHDVMMVENRPLARALYDQVEIDQAVPEEFFKVLAEILAYVYKTKQ 357 >UniRef50_Q89AN6 Flagellar biosynthetic protein flhB n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=FLHB_BUCBP Length = 382 Score = 254 bits (648), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 128/373 (34%), Positives = 227/373 (60%), Gaps = 6/373 (1%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 DES++KTE+PT +RL+ ++E G REL SLLIL + + W+ + L + Sbjct: 4 DESEEKTESPTSYRLKISKETGHNRYYRELYSLLILTITLINFWYNQRLILTLLKRIFYL 63 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 F++SI + + +++ ++ +++LL +I +L+ + ++L F+ K ++ Sbjct: 64 SFTFNNSIFQNDLFLDHNFLMIFQDNLISLLGIIFFPMLIFMFPAMILCCSNFNFKFIKF 123 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT-- 180 +KLNP+ G K +FS ++ +L K +LK + V V F+ ++ +++ S T Sbjct: 124 DINKLNPILGFKNVFSIKSIVDLFKTVLKIVFVSIVVYLFISKYF---LKVCFSSNFTFD 180 Query: 181 -AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + ++ + LC L +++ IP++ D+F++ ++ + LRM+R+++ DE K EG+P + Sbjct: 181 YILNYSVRTIFLCFLTILIFFIPIIIIDLFWEKYNFYRSLRMTRKEVSDELKNMEGNPRI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RIRQ+ + + RRM+++V K+DVIV NP HY++A++Y+E M APK++AKG +A++ Sbjct: 241 KSRIRQIMFSISNRRMLSNVSKSDVIVVNPMHYAIAIKYNETNMYAPKILAKGIDELAIK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I++IG +++PTL + LA LY E+G+ IP LY AVAEVLAWVW+++ W++ GG Sbjct: 301 IKKIGNNHSIPTLVSHSLAHVLYYRTEVGEYIPSVLYEAVAEVLAWVWKIRHWKIKGGVF 360 Query: 360 PVQPTHLPVPEAL 372 P P +P L Sbjct: 361 PRTPEKFFIPSEL 373 >UniRef50_Q2LT07 Flagellar biosynthesis pathway component n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LT07_SYNAS Length = 354 Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 137/355 (38%), Positives = 212/355 (59%), Gaps = 10/355 (2%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S++ ++TE TP R E+ARE+GQ+ +SR+L S+ IL + +FG S +L ++ Sbjct: 4 SNKDQERTEEATPKRREEAREQGQVAKSRDLASVAILSACLLYFYFGANSFLHQLMDLMK 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + S + I + + + + P + V + AL S ++ G S K++ Sbjct: 64 SSFSSLDSSLVTTENIQSLLFSAFYKTITLMTPFLLVVCIAALSSNILQVGFKISTKAIA 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP--- 178 PK SK++P G R+FS Q+ E +K+I K + G V + ++ L S Sbjct: 124 PKLSKIDPAKGFARLFSLQSLIEFIKSIFKISIAGFVAYLTVKSELVDILPLADSSVWEI 183 Query: 179 -ITAMGNAMD-LVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 + G + L+ C +L++L ++ D +Q + + + L+MSRQ+I+DE KQ+EGD Sbjct: 184 LVYITGTSFRILLTTCWVLIILALM-----DYLYQRWEYERNLKMSRQEIKDENKQTEGD 238 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P VK RIR++QR A+RRMMA+VPKADVI+ NPTH +VALQYD++ M APKV+AKGAG + Sbjct: 239 PIVKARIRRLQREMAQRRMMANVPKADVIITNPTHLAVALQYDQDSMIAPKVIAKGAGYL 298 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 A +I+EI E+ VP +E PLA+ LY+ E+ IP LY AVAE+LA+++ +KR Sbjct: 299 AEKIKEIARESRVPLVENKPLAQVLYKMVEVSGTIPDSLYKAVAEILAYIYSIKR 353 >UniRef50_C4G684 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G684_ABIDE Length = 387 Score = 247 bits (630), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 147/360 (40%), Positives = 216/360 (60%), Gaps = 23/360 (6%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 E DKTE TP +LE AR+EG++ RS +L + L+LL+ V+ G +A+ G L + Sbjct: 31 EGGDKTEKATPKKLEDARKEGRVARSSDLINGLMLLLMFFVLRIFGNFMAK---GFLESF 87 Query: 64 LHFDHSIINDPNLI--------LGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVF 115 + + + + I LG I+ + ++A LP++ G LVA V+ G Sbjct: 88 VKYYNKTADISMEIFDVKQAVNLGNEIVF--DIVIACLPVLIGSFLVAFAGNVVQIGWKV 145 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 + K L+PK +LNP+ G+KRMFS + EL+K+ILK + + V + W ++ L Sbjct: 146 TTKPLKPKLDRLNPIGGLKRMFSQEKVVELIKSILKVLAIAIVAYNEVKDRWLFILNLYD 205 Query: 176 ESPITAMGNAMDLV-----GLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEF 230 + A+ N D+V + L V++G+ D +Q + HL LRMS+Q+++DE Sbjct: 206 FEFMQAIVNIFDIVLDVGVKISVLFVIIGIA-----DFGYQKWKHLHDLRMSKQEVKDEM 260 Query: 231 KQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVA 290 KQSEGDP VKGRIRQ R ARRRMM ++PKADV++ NPTH++VA++YD+ K AP V+A Sbjct: 261 KQSEGDPQVKGRIRQKMREGARRRMMQELPKADVVITNPTHFAVAIKYDKEKAEAPYVLA 320 Query: 291 KGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 KGA VA I+E E+ + +E PLAR LY + EIG+QIP +LY VAEVLA+V+ +K Sbjct: 321 KGADYVAATIKEAAKEHKIEIVENKPLARMLYYNVEIGEQIPPELYQMVAEVLAYVYSVK 380 >UniRef50_B1LC25 Flagellar biosynthetic protein FlhB n=6 Tax=Thermotogaceae RepID=B1LC25_THESQ Length = 374 Score = 246 bits (628), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 134/352 (38%), Positives = 209/352 (59%), Gaps = 13/352 (3%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 ++TE TP + + REEG+ P SREL + LV + G R++ + A L F Sbjct: 32 ERTERATPRKRRRVREEGRAPVSRELNMAVTFLVFALALKIFGYQGVERITEDVQAFLSF 91 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGL----VFSGKSLQP 122 + + +L++ + +L +I V+ ++++ VM+G L +F+ K+L+P Sbjct: 92 EET----EDLLVNAV-----NTFKDVLLIIGAFVVFSMVAGVMIGALQTRFLFAPKALKP 142 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 +++NP+ G KR+FS ++ ELLK++LK +VG V L + W +M+ L + A Sbjct: 143 DLNRINPIEGFKRLFSLRSLVELLKSVLKVAIVGIVVYQVLKNRWDEMILLTEMNVNDAF 202 Query: 183 GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 N D+ L + ++ + FD F+Q + K +RM++Q+++DE K+ EG+P +K R Sbjct: 203 ANFWDIASEITLKSGMVLLALAVFDYFYQRWEFEKSIRMTKQEMKDELKEVEGNPEIKRR 262 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 RQM RRRMM +VPKADV++ NPTH++VAL+YD + M+AP VVAKG +AL+I E Sbjct: 263 QRQMMYDILRRRMMEEVPKADVVITNPTHFAVALKYDPDTMNAPVVVAKGVDHLALKIIE 322 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 I EN+VP L P LARALY EIG++IP + Y VAEVL +V+ K R+ Sbjct: 323 IAKENDVPVLRNPSLARALYYKTEIGEEIPVEFYRIVAEVLVYVYTKKGVRI 374 >UniRef50_A3DCP3 Flagellar biosynthetic protein FlhB n=14 Tax=Clostridia RepID=A3DCP3_CLOTH Length = 392 Score = 243 bits (620), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 137/356 (38%), Positives = 214/356 (60%), Gaps = 16/356 (4%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 ++ +KTE TP + KAREEGQ+ +SREL S ++LL + G + + L Sbjct: 39 DNGEKTEKATPRKRSKAREEGQVLQSRELNSAIVLLSAFVTLRIFGQYMYEEILKCLKVA 98 Query: 64 LHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLG----GLVFSGKS 119 + +ND + + L E ++ L + + V++V LI+ + G +F+ K+ Sbjct: 99 ITVYP--LNDGLFTIDGLFELYGETVITFLKIATPVLMVVLIAGIGSAYAQVGFLFTTKT 156 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L K S++NPL G KR+FS ++ ELLK+I+K LVG + ++ ++ +M + Sbjct: 157 LGIKLSRINPLKGFKRIFSLKSLVELLKSIIKIALVGYIGYGYIKGEMTNVLGMMDVDVV 216 Query: 180 TA---MGNAM--DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 ++ +G+ + + +C VV+GV D +Q + + K LRMS+Q+I++E K+ E Sbjct: 217 SSASFLGSTILNAAIRMCIAFVVIGVA-----DYGYQWWEYEKSLRMSKQEIKEENKEVE 271 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 G+P +K RIRQ QR + RRM+ D+PKADV++ NPTHY+VA++YD + AP VVAKG Sbjct: 272 GNPEIKSRIRQKQRQMSMRRMLQDIPKADVVITNPTHYAVAIKYDPKEADAPVVVAKGQD 331 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +ALRI+EI E+ V +E PLA+ LY+ EIG +IP +LY AVAEVLA+V+ LK Sbjct: 332 YMALRIKEIAKEHKVEIVENKPLAQTLYKTVEIGGKIPPELYQAVAEVLAFVYSLK 387 >UniRef50_D0IYF3 Type III secretion exporter n=11 Tax=Comamonadaceae RepID=D0IYF3_COMTE Length = 393 Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 149/380 (39%), Positives = 221/380 (58%), Gaps = 18/380 (4%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 ES DK T +L+K RE+GQ RSR+L+ L IL G ++ G + L ++ Sbjct: 2 SESQDKNLPATERKLQKTREDGQGARSRDLSHLAILGTGALLMLMGTQPMINHLREAMAR 61 Query: 63 GLHFDHSIINDPNLILG--QIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L F+ + P L+L Q +L++ + + L++ +++S V GG +FS K + Sbjct: 62 QLVFNAAAAKTPALMLERFQSMLVLGLGIAVIFALVT--TTASVLSGVAAGGWIFSFKPI 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE-SPI 179 QP+F KLNPL G+K +FS Q ++K + TI++G V W M +AE + + Sbjct: 120 QPRFGKLNPLSGLKNLFSKQQLTTVVKMVFMTIVLGFVA-------WKYMSANIAEIASV 172 Query: 180 TAMGNAMDLVGLCALLVV------LGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQS 233 +A + M L + + L + V+ + DV Q F +L+MS ++++ E K+S Sbjct: 173 SAQPSPMALTMVGSWLTTGITLLLIVVLLVALIDVPLQDFLFKSRLKMSHEEVKQEHKES 232 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EG+P +KG+IRQ QR A R ++ VPKAD +V NPTHY+VAL+YD+ M+AP+V+AKG Sbjct: 233 EGNPQLKGKIRQKQREIADRASVSAVPKADFVVTNPTHYAVALRYDDASMAAPQVIAKGT 292 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 LVAL+IREI + +P LE+P LARALY HA++ Q IP LY AVA+VLA+V++LK Sbjct: 293 DLVALKIREIAGAHQIPVLESPMLARALYAHADLDQAIPAALYTAVAQVLAYVYRLKAAL 352 Query: 354 LAGGQRPVQPTHLPVPEALD 373 G P PVP LD Sbjct: 353 SGQGPMPDALGEPPVPVELD 372 >UniRef50_A8TPM3 Flagellar biosynthesis protein B n=1 Tax=alpha proteobacterium BAL199 RepID=A8TPM3_9PROT Length = 358 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 145/363 (39%), Positives = 220/363 (60%), Gaps = 24/363 (6%) Query: 1 MSDESDD--KTEAPTPHRLEKAREEGQIPRSRELT---SLLILLVGVSVIW-FGGVSLAR 54 MSD DD KTE PT +L AR++GQI +S+E+T SLL L V+++ + + L Sbjct: 1 MSDSQDDSQKTEEPTGKKLGDARKKGQIAQSKEVTNFASLLALTFAVTILAPYMAIQLYS 60 Query: 55 RLSGML--SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGG 112 ++ ++ +A D + +++G +I + LAL P + V+++ + + + G Sbjct: 61 SMAVVIEHAAVARIDAG--STSEILMGLVI----DTFLALAPTLGTVMVLGVAATLGQSG 114 Query: 113 LVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMR 172 ++F+ + PK KL+PL G KR+FS ++ E +K I+K +V + + + Sbjct: 115 ILFTTDPIMPKLEKLSPLAGFKRLFSLKSIVEFIKGIIKLAIVAFIAYVLMSPELDRAEE 174 Query: 173 LMAESPITAMGNAMDLV-----GLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIR 227 L+ I + LV G+ A + V+ + D +Q + H K+LRMSRQDIR Sbjct: 175 LLTMDLIEVLKEIQTLVIRLMMGVLAFMAVVAIA-----DYIYQRYEHYKQLRMSRQDIR 229 Query: 228 DEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPK 287 DE KQ+EGDP +K R+RQ++ ARRRMMA VPKADV++ NPTH++VALQYD + M+AP Sbjct: 230 DEHKQAEGDPQIKARLRQIRADRARRRMMAAVPKADVVITNPTHFAVALQYDTSAMAAPV 289 Query: 288 VVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW 347 VVAKG+ VA RIRE+ E+ VP +E PPLARAL+ EI +QIP Y AVA+V+++V+ Sbjct: 290 VVAKGSDAVAFRIREVAKEHKVPIVENPPLARALFASVEIDEQIPETYYKAVAQVISYVY 349 Query: 348 QLK 350 +LK Sbjct: 350 RLK 352 >UniRef50_Q1YV76 Flagellar biosynthetic protein FlhB n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YV76_9GAMM Length = 382 Score = 241 bits (614), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 129/372 (34%), Positives = 218/372 (58%), Gaps = 7/372 (1%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVS-VIWFGGVSLARRLSGMLS 61 D S+++ E PT RLEK RE+GQ+ RS+EL + +++GV+ ++ G + L+ + + Sbjct: 5 DSSEEREEEPTAKRLEKGREDGQVARSQEL-GVAAMMIGVAFFLYLFGSYIIADLTKVFA 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 +G FD + D +L++ + + + ++P+ V++A+ S ++GG +FS KSL Sbjct: 64 SGFTFDRKAVFDTSLLVPAFGIQAVNSFIVVVPIFVLAVIIAIASAGIMGGYIFSLKSLA 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK SK+NP+ G+KRMF + +L KA+ K L+ V + ++P + +L A Sbjct: 124 PKASKINPMAGLKRMFGMKAVVDLSKALSKFALIALVLYLVVSANFPMLTKLGFMDLEPA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 M A ++ +LV L +I D+ +Q+ + K+++M++Q++++E K +EG P VK Sbjct: 184 MAEAGRIIAFGTVLVTLTLIVAAAIDIPYQLHTFNKQMKMTKQEVKEEMKDTEGRPEVKA 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 +IR+ QR A MM+ + ADV++ NP H++VAL YD +K AP +VAKGA L+A IR Sbjct: 244 QIRRKQREIATGMMMSAIADADVVIVNPEHFAVALSYDPSKNGAPIMVAKGADLLAKAIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 E E +P +P LAR+++ EI Q +P LY AVA+V+A+++ L + +R Sbjct: 304 ERAKEEGIPLFSSPVLARSIFYTTEINQSVPESLYYAVAQVIAYIFNLNSF-----ERGA 358 Query: 362 QPTHLPVPEALD 373 Q P P+ D Sbjct: 359 QTAKKPNPKVPD 370 >UniRef50_Q0AYL8 Flagellar biosynthesis/type III secretory pathway protein n=3 Tax=Clostridia RepID=Q0AYL8_SYNWW Length = 369 Score = 241 bits (614), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 136/352 (38%), Positives = 204/352 (57%), Gaps = 4/352 (1%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 D +KTE TP R E+AR++GQ+ +S +L S +IL+ G + + L + Sbjct: 17 DDGMGEKTEKATPRRREEARKKGQVFKSTDLNSAIILIAGSVASFMAFPYMVNNLKSFTT 76 Query: 62 AGL--HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L ND + +L+I M+ P+ +VAL+ + G VFSG+S Sbjct: 77 LYLLQRTQQDFSNDYIYFMLLEVLIIMGKMI--FPIFLTTFIVALLITYLQVGFVFSGES 134 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L PK +LNP+ G KR+FS + EL K++LK I+ G + + H+ R + I Sbjct: 135 LTPKLERLNPVEGFKRIFSKRALVELGKSLLKVIVTGYIVYSVMRKHYILFPRFIDMELI 194 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + +V A+ V L I + D FQ + H K L+MS+ +I+ E+KQ+EGDP + Sbjct: 195 AGLQVLSSIVFEMAMKVGLVFIIIGIADYIFQWYEHEKSLKMSKYEIKQEYKQTEGDPQL 254 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K R R++QR A +RMMA+VPKADV++ NPTH++V L+Y+ +KM AP VVA+G +AL+ Sbjct: 255 KSRQRRIQRDIAMQRMMAEVPKADVVITNPTHFAVVLKYEASKMEAPVVVARGKDFMALK 314 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 I+EI + V +E P LAR LY + EIG +P +LY AVAEVLA+V++ K+ Sbjct: 315 IKEIARMHGVVIVENPVLARTLYYNTEIGDLVPEELYQAVAEVLAFVYKQKK 366 >UniRef50_C0ZF82 Flagellar biosynthetic protein FlhB n=4 Tax=Paenibacillaceae RepID=C0ZF82_BREBN Length = 365 Score = 240 bits (613), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 137/355 (38%), Positives = 216/355 (60%), Gaps = 22/355 (6%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL-H 65 +KTE TP + + AR++GQ+ +S++L+ L L ++ G ++ ++ L Sbjct: 18 EKTEKATPKKKQDARKKGQVAKSQDLSPALSLTAFFFLLMMLGSTMLGTFQDLMRESLIT 77 Query: 66 FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFS 125 + +N+ NL + ++ L+ EA+ + P++ LVA M G FS + LQ K Sbjct: 78 YTTWQLNEENLKV-MVMQLVFEAIKIVGPILGLSFLVAFAVNYMQVGWHFSTEPLQMKLE 136 Query: 126 KLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL----------MA 175 K++P+ G KR+FS ++ ELLK++LK V LW+ Q+++L Sbjct: 137 KIDPIKGAKRIFSLRSLVELLKSLLKISAGIYVAYVILWNAKEQVVQLSLLSLGAVLSFT 196 Query: 176 ESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 +T +G + L LL +L V+ D +Q + H K LRMS+QD++DE KQ+EG Sbjct: 197 AEEVTKLG-----IYLGLLLFILAVL-----DYAYQRYEHEKNLRMSKQDLKDEHKQAEG 246 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DP +KG+IR+ QR+ A RRMM ++PKADVI+ NPTH++VA++YD + MSAP V+AKG Sbjct: 247 DPLIKGKIRERQRSMAIRRMMQELPKADVIITNPTHFAVAVRYDASAMSAPTVIAKGQDY 306 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +AL+IRE+ ++ + T+E PLARALY E+GQQIP +++ AVAEVLA+V++L+ Sbjct: 307 LALKIREVAKKHRIVTMENKPLARALYSQVEVGQQIPEEMFKAVAEVLAYVYKLQ 361 >UniRef50_A7K1M6 Flagellar biosynthesis protein FlhB n=13 Tax=Vibrionaceae RepID=A7K1M6_VIBSE Length = 375 Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 144/389 (37%), Positives = 227/389 (58%), Gaps = 31/389 (7%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGV-SLARRLSG 58 MSD+S DKTE +P +++KAR+EGQIPR++E T+ +I L V++ ++ + S+ +SG Sbjct: 1 MSDQSSQDKTEKASPQKVKKARQEGQIPRAKEFTTAVIFL-AVALYFYSQLNSIWESMSG 59 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + + + +P ++ Q+ + + LLPL + +++V S ++LGG +F Sbjct: 60 IFRYNMMLTRADLENPKQLVEQLGQSLAVIIDMLLPLFTVIIIVTCGSSLVLGGWMFRPA 119 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 ++ PK SK+NPL GIKR+FS ++ ELLK+ K ++ + +L +H P Sbjct: 120 NVMPKLSKINPLSGIKRIFSTRSVVELLKSTFKVAVIFGILYGYLDNHL---------QP 170 Query: 179 ITAMGNAMDLVGLCALLVVL--------------GVIPMVGFDVFFQIFSHLKKLRMSRQ 224 + M N G ++ +L GV+ D+ +Q + HLK+LRM++Q Sbjct: 171 LLGMQNLPLSQGFSLVMSILFEGLLLMGFALLLFGVV-----DIPYQRWEHLKELRMTKQ 225 Query: 225 DIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMS 284 ++++EFK +EG P VK RIRQ+Q+ ARR++ VP ADVI+ NPTHY+VAL+Y+ + Sbjct: 226 ELKEEFKNNEGRPEVKQRIRQIQQQFARRKIDKMVPTADVIITNPTHYAVALKYEPSLSD 285 Query: 285 APKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLA 344 AP VVAKG A+ I+ I EN V + +PPL R++Y I Q IP QLY AVA +L Sbjct: 286 APFVVAKGVDETAMHIQRIARENKVEIINSPPLTRSIYHTTAIEQAIPSQLYIAVAHILT 345 Query: 345 WVWQLKRWRLAGGQRPVQPTHLPVPEALD 373 +V QLK +R G+ P H +P+ L Sbjct: 346 YVLQLKAFRKGEGKEPTPLPHFSIPKHLQ 374 >UniRef50_C9PBY4 Flagellar biosynthesis protein FlhB n=4 Tax=Vibrio RepID=C9PBY4_VIBFU Length = 376 Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 142/382 (37%), Positives = 236/382 (61%), Gaps = 18/382 (4%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGV-SLARRLS 57 MSD+ S DKTE +P +++KARE+GQIPR++E T+ +I L V++ ++ + ++ + ++ Sbjct: 1 MSDQASSQDKTEKASPQKVKKAREQGQIPRAKEFTTAVIFL-AVAIYFYAQLPAIWQSIA 59 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 G+ L + +++P ++ Q+ + + L+P+ +++V L S ++LGG +F Sbjct: 60 GVFRYNLSLTRADLDNPMQMVEQLGHSLGMVIELLMPMFLVIIVVTLASSMILGGWLFRP 119 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL---- 173 +L PK +KLNP+ GI R+FS ++ EL+K+ LK ++ +V +L +H M+ + Sbjct: 120 ANLLPKLNKLNPISGISRIFSTRSLVELVKSTLKVSVIFAVLYGYLDNHLQPMLGMQGLP 179 Query: 174 MAESPITAMG---NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEF 230 + + I M + L+G L+V GVI D+ +Q + HLK+L+M++Q++++E+ Sbjct: 180 LNQGFILIMNILFEGLLLMGFA--LLVFGVI-----DIPYQRWEHLKELKMTKQELKEEY 232 Query: 231 KQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVA 290 K +EG P +K RIRQ+Q+ ARRR+ VPKADV++ NPTHY+VAL+YD AP VVA Sbjct: 233 KNNEGRPEIKQRIRQIQQQFARRRIDKMVPKADVVIVNPTHYAVALKYDPALSDAPFVVA 292 Query: 291 KGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 KG AL I+ + +N V + +PPL R++Y I Q +P QLY AVA +L +V QLK Sbjct: 293 KGVDETALHIQRLARDNQVEIIHSPPLTRSIYYTTAIEQAVPSQLYVAVAHILTYVLQLK 352 Query: 351 RWRLAGGQRPVQPTHLPVPEAL 372 +R G++P+ H +P L Sbjct: 353 AFRSGSGEQPLPLPHFSIPNHL 374 >UniRef50_Q2W9Q2 Flagellar biosynthesis pathway n=3 Tax=Magnetospirillum RepID=Q2W9Q2_MAGSA Length = 355 Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 138/352 (39%), Positives = 212/352 (60%), Gaps = 4/352 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+++SDDKTE PT +L +ARE+G IP S+E+ L+ + V+ +AR + +L Sbjct: 1 MAEDSDDKTEEPTDRKLSQAREQGNIPTSQEVKIWASLVGALVVVTLFAPYMARDIGRLL 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALL--PLISGVVLVALISPVMLGGLVFSGK 118 + H+ + GQ++ I M+ LL P++ VVL A+ S + GL+F Sbjct: 61 LPFVEHPHAFPMGREDV-GQLLSGITVDMIKLLIMPMMMLVVL-AIASAMGQSGLMFLPD 118 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L F KL+P G++R+FS + E +K++ K +G V L H + L A Sbjct: 119 KLTLDFGKLSPGKGLQRIFSGRNLVEFVKSLFKVSAIGFVIFLILKSHMSEYAGLAALDL 178 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + + V ++VVL V + D F+Q ++ ++++M++Q+I+DE KQ+EGDP Sbjct: 179 MAVLDYLRHQVITMIIVVVLMVFVLAAADWFYQRWAFTQQMKMTKQEIKDEHKQTEGDPM 238 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +KGR+R ++ AR+RMMA VP+A V+V NPTHY+VALQYD++ M AP +VAKG L+A Sbjct: 239 IKGRLRALRMQRARQRMMAAVPRASVVVTNPTHYAVALQYDQDSMGAPVLVAKGVDLIAK 298 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 RIR++ EN VP +E PPLARALY E+ Q+IP + Y VAE++ +V +LK Sbjct: 299 RIRDLATENEVPIVENPPLARALYATVELDQEIPPEHYKTVAEIIGYVMKLK 350 >UniRef50_C9LSQ5 Flagellar biosynthetic protein FlhB n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LSQ5_9FIRM Length = 366 Score = 238 bits (606), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 137/359 (38%), Positives = 216/359 (60%), Gaps = 22/359 (6%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT R AR++GQ+ RS+EL+ +LL G V+ G ++ L+ + + +H Sbjct: 20 EKTEEPTAKRRNDARQKGQVARSQELSGAFVLLAGFFVMRALGSTI---LTEIETYTVHI 76 Query: 67 DHSIINDP-------NLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 ++ +N LI+ +I+L + A P++ ++++ L G +F+ + Sbjct: 77 -YANMNQTVDAETVMRLIIDGMIVLAKTA----FPVMIAILVMGLAINFYQVGFMFTTEP 131 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFL---WHHWPQMMRLMAE 176 L K KLNP+ G R+FS ++ ELLK++LK ++G+ +L H P+ + L + Sbjct: 132 LSFKLDKLNPITGFGRIFSKRSIVELLKSLLKIAIIGAFLYVYLSGEIMHMPEFIYLDLK 191 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 S + MG D++ +++ M D +Q + + L+MS+QDI++EFKQ+EGD Sbjct: 192 SSMARMG---DIIFSLVFQIIIVYFVMAAADFAYQKWQTTQDLKMSKQDIKEEFKQTEGD 248 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P +KG+IRQ Q+ A RMM +VP+ADVIV NPTHY+VAL+Y M AP+VVAKG LV Sbjct: 249 PQIKGKIRQKQQQMAMNRMMKEVPEADVIVTNPTHYAVALKYKAG-MKAPEVVAKGQDLV 307 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 A +I++I E+ V +E PLARALY ++G +P +LY AVAEVLA+V++LK+ + A Sbjct: 308 AQKIKDIAREHRVTIVENKPLARALYAAVDVGGIVPPELYQAVAEVLAYVYRLKKKKFA 366 >UniRef50_B5YIY9 Flagellar biosynthetic protein FlhB n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIY9_THEYD Length = 353 Score = 237 bits (604), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 138/364 (37%), Positives = 216/364 (59%), Gaps = 20/364 (5%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M +E ++TE TP R EKAR++G++PRSRELT ++ + F G L + M Sbjct: 1 MPEELQERTEQATPRRREKARQKGEVPRSRELTGIIGTWMIFLYFVFSGTFLISIMQHMK 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAM----LALLP----LISGVVLVALISPVMLGG 112 A + + +P + II +I++ + + LP L+ GV+LV I G Sbjct: 61 EA-----FTRVKNPEFVASAIITIIKDEIKWYFIQFLPIGGVLLFGVLLVHFIQT----G 111 Query: 113 LVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMR 172 +F+G +L P SK++PL GIK++FS E +K ILK + +G V +F+ ++ Sbjct: 112 FLFTGATLVPDVSKISPLKGIKKLFSLNALFETIKGILKLVALGIVI-YFVLKKDVNILP 170 Query: 173 LMAESPITAM-GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFK 231 L+ + + A+ G + + L ++ + G D +Q + + + LRM++Q+I++EFK Sbjct: 171 LLIDMDVKAIAGISFQKIYQLILACLIMLTVFAGIDFAYQRWQYERNLRMTKQEIKEEFK 230 Query: 232 QSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAK 291 ++EG P V+ RIR +QR AR+RMM +VPKADV++ NP H +V ++YD M+AP VVAK Sbjct: 231 ETEGSPMVRARIRSLQREMARKRMMQEVPKADVVITNPLHLAVCIKYDSKNMNAPAVVAK 290 Query: 292 GAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 GA L+A RI+EI + VP E PLARALYR +G++IP LY AVA +LA V+++K Sbjct: 291 GANLLAERIKEIARASGVPIYENKPLARALYR-IPLGEEIPEALYKAVATILATVYKIKG 349 Query: 352 WRLA 355 ++A Sbjct: 350 RQIA 353 >UniRef50_Q0EZ55 Flagellar biosynthesis protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ55_9PROT Length = 355 Score = 234 bits (597), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 135/361 (37%), Positives = 217/361 (60%), Gaps = 17/361 (4%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRE-LTSLLILLVGVSVI-----WFGGVSL 52 M+DE D +TE TP R E AR++GQI S+E T++ ++ + VI WFG + Sbjct: 1 MADEQDKSQQTEEATPKREEDARKKGQIATSKEPSTAIAFTVISLIVITGLGSWFGE-QM 59 Query: 53 ARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGG 112 L+ LS +H + L++ + + + +LP+ ++L+ L+ M+ G Sbjct: 60 QHMLTNYLSGAVHIKATGEGMQKLLISAVT----DMAMVVLPIAVPIMLLGLLVTFMVSG 115 Query: 113 LVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMR 172 VF+ +++ PKF K++PL GIKR+FS + AE +K++LK +L+ + + +++ Sbjct: 116 PVFTFETMIPKFEKISPLKGIKRLFSTKALAEFIKSVLKLVLISVACATIVSGMFSEILH 175 Query: 173 LMAESPITAMGNAMDLVGLCALLVVLGVIPMVGF--DVFFQIFSHLKKLRMSRQDIRDEF 230 + P A A+ L G + ++ VI +V DV +Q + H K LRMS+++ RDE Sbjct: 176 TALKDP--ADIAALTLFGSVKITTLVAVIFVVIALADVLYQRWEHAKSLRMSKKEQRDEH 233 Query: 231 KQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVA 290 K SEGDP +K +IRQ+Q A+ RMM+DVP ADVI+ NPTH S+AL YD AP+V+A Sbjct: 234 KDSEGDPQLKAKIRQIQMQQAQNRMMSDVPDADVIITNPTHISIALAYDPLSPGAPRVLA 293 Query: 291 KGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 KG G +A +IREI E+++P E PLAR+L++ ++G +IP L+ A+A +LA +++LK Sbjct: 294 KGKGHLAAKIREIAREHHIPMRENKPLARSLFKQVKVGDEIPEVLFEAIAIILAEIFRLK 353 Query: 351 R 351 + Sbjct: 354 Q 354 >UniRef50_B8CVM2 Flagellar biosynthetic protein FlhB n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CVM2_SHEPW Length = 393 Score = 234 bits (597), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 130/371 (35%), Positives = 220/371 (59%), Gaps = 2/371 (0%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVS-LARRLSGMLS 61 D KTE TP +L+KA+ EGQ+PRS++L S L++G S++ +A +++ M Sbjct: 21 DSGQSKTEQATPQKLKKAKSEGQVPRSKDLASS-ALIIGCSLMLTTSADWIAAKVAKMTR 79 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + F + +++P +++ + + E + L PL V L+A+++ M GG +F+ K+ Sbjct: 80 TNMSFTKAQLDEPGMMMRHLGQSLLEVLNILGPLFLMVALIAMVAGAMPGGPIFNFKNAA 139 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 K+S+++P+ GI RM S ++ EL+K+ILK +L+ + FL + ++ A Sbjct: 140 FKYSRIDPIAGIGRMASVKSLVELVKSILKIVLLMGIMWLFLEKNLQTLLSFNQLPVDEA 199 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + ++++ L + LG++ + DV +Q + H +L+MS Q+++DE KQ +G P +K Sbjct: 200 VSKGIEMLSLGMFFLGLGLLLITFIDVPYQYWHHHNELKMSLQEVKDEHKQQDGKPEIKA 259 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 +IRQMQ+ +R R VPKADV++ NPTHY+VAL+YD +K AP V+ KG +AL +R Sbjct: 260 KIRQMQQRISRSRADISVPKADVLLVNPTHYAVALKYDIDKADAPYVLTKGTDELALHMR 319 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 E+ ++V +E PPL RA+Y ++ QQIP L+ A+A VL +V Q+K R +P Sbjct: 320 EVAKRHDVEVIELPPLTRAIYYSTKVDQQIPAALFIAIAHVLTYVLQIKAARQGKQAQPE 379 Query: 362 QPTHLPVPEAL 372 H +P+ L Sbjct: 380 PLPHFFIPKNL 390 >UniRef50_B9Z4S0 Type III secretion exporter n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4S0_9NEIS Length = 380 Score = 234 bits (596), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 147/382 (38%), Positives = 225/382 (58%), Gaps = 32/382 (8%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWF---GGVSLARRLSGMLSAG 63 DKTE TPH+L +AR++GQ+ RSR++ S + LLV + + + G + RRL + A Sbjct: 8 DKTEKATPHKLRQARQQGQVARSRDMASAIGLLVALKLAFLSMPGWLDDFRRLFALSFAT 67 Query: 64 LHFDHSIINDPNLIL-GQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 L ++ N +++ G + LL++ +LPL +LVA +S + GG VF+ + QP Sbjct: 68 LSGQGALGNTWSMLFSGTLTLLVK----MILPLAVIPLLVATVS-LFPGGWVFASRHFQP 122 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSV---------TGFFLWHHWPQMMRL 173 + +LNPL R+ S Q +++ K+I+K +++G+V FF P Sbjct: 123 RLDRLNPLAHFGRIASPQHASDIAKSIVKALVLGAVLYHVSRGAAQDFFALQGVP----- 177 Query: 174 MAESPITAMGNAMD-LVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQ 232 + E+ A MD L+ L A+ + +I D+ Q L++ RMS+Q+I+DE+K Sbjct: 178 LDEALSRAASLLMDALLALTAVFIAFALI-----DLPLQTLLFLRQQRMSKQEIKDEYKT 232 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 +EG P +K R+RQ+Q A+R + VP ADV++ NP+HY+VAL+YDE++ AP ++AKG Sbjct: 233 TEGRPEIKQRVRQLQLQMAQRGVRKSVPTADVVIVNPSHYAVALKYDEDRAEAPFIIAKG 292 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 +AL IR++ AE+ V L PPLARA+Y ++ QQIP LY AVA+VL +V QLK + Sbjct: 293 IDEMALYIRQVAAEHAVEVLPIPPLARAVYHTTQVNQQIPAPLYRAVAQVLTYVLQLKAF 352 Query: 353 RLAGGQ--RPVQPTHLPVPEAL 372 R AG + RP P LPVP L Sbjct: 353 R-AGSRHSRPELPAELPVPHEL 373 >UniRef50_A1HN21 Flagellar biosynthetic protein FlhB n=2 Tax=Veillonellaceae RepID=A1HN21_9FIRM Length = 376 Score = 233 bits (595), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 128/355 (36%), Positives = 216/355 (60%), Gaps = 17/355 (4%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG----ML 60 + +KTE TP R E+AR++GQ+ +S EL S L LL I G + +L+ + Sbjct: 28 NQEKTEEATPKRREEARKKGQVAKSVELGSALCLLAAFFTIKLTGTYIYEQLASYMQFLF 87 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 S D +I + L ++ ++ +LP++ ++ V+L+ M G FS + L Sbjct: 88 SRFTKEDMTIASSYRFFLDLALIFLK----IVLPIMLVILAVSLLVNFMQVGFTFSVEPL 143 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +P+ S++NPL G++R+FS ++ EL+K++ K ++ +F++ + +A Sbjct: 144 KPQLSRINPLAGMQRLFSKRSLVELVKSLFKV----AIISYFIYQFIIEETLNIALLSRL 199 Query: 181 AMGNAMDLVGLCA--LLVVLGVIPMV--GFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 A+ +++ ++ L +GV+ +V D ++Q + H + L+M++Q++++EFKQ+EG+ Sbjct: 200 ALRDSLAVIAALTFDLAFRIGVVILVLAILDYYYQWWEHNQNLKMTKQEVKEEFKQTEGN 259 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P +K +I++ QRA A RRMM +VPKADV+V NPTH+++AL Y E M+AP V+AKG + Sbjct: 260 PQIKSKIKERQRALAMRRMMQEVPKADVVVTNPTHFAIALLY-EKTMTAPMVIAKGQDFM 318 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 A RI+ + EN V +E LARALY EIG+ +P +LY AVAEVLA+V++LK+ Sbjct: 319 AERIKLVAKENGVAIVENKALARALYDTVEIGETVPPELYKAVAEVLAYVYRLKK 373 >UniRef50_B6IS89 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodospirillum centenum SW RepID=B6IS89_RHOCS Length = 359 Score = 233 bits (594), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 141/358 (39%), Positives = 219/358 (61%), Gaps = 19/358 (5%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVI-----WFGGVSLARRLSG 58 + D KTE PT +L ARE+GQ+ +S E+ +L IL G+ ++ W G R L Sbjct: 6 DQDSKTEEPTDKKLSDAREKGQVAKSMEVGNLFILASGLVMVLLLLPWSG-----RILWD 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + H+I+ P + + L + AL P + ++L AL +P++ GL+FS + Sbjct: 61 AMMPFVERPHAILMAPAALGDVLTDLTLDIAFALAPTLVLLLLAALAAPIIQVGLMFSAE 120 Query: 119 SL-QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA-- 175 ++ + +K+NPL G+K S + E LK++ K +LVG V L W + +A Sbjct: 121 NVFKFDLNKVNPLTGLKNKVSLKNLVEFLKSLGKLVLVGIVVSVLLLPLWTSIEHFLALP 180 Query: 176 --ESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQS 233 + A L+ A+++VLG I G D FQ + ++++RM++Q+++DE+KQ+ Sbjct: 181 LPSVIVETRHEAAKLI--AAVVIVLGAI--AGADYAFQRYQFMQQMRMTKQEVKDEYKQT 236 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EGDP +K +IRQ++ +R RMMA VP ADV+V NPTH++VAL+YD + MSAP+VVAKGA Sbjct: 237 EGDPLIKSKIRQLRMQRSRNRMMAAVPSADVVVTNPTHFAVALKYDASAMSAPRVVAKGA 296 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 L+A RIRE+ E VP + PPLARAL+ AEI ++IP + Y AVA+V+++V++LKR Sbjct: 297 DLIAKRIRELAEEAGVPVISNPPLARALFATAEIDEEIPAEHYKAVAQVISYVFKLKR 354 >UniRef50_UPI0001BCCDC9 flagellar biosynthesis/type III secretory pathway protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCCDC9 Length = 369 Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 142/355 (40%), Positives = 213/355 (60%), Gaps = 18/355 (5%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVG---VSVIWFG-GVSLARRLSGMLSA 62 +KTE PT + AR++GQ+ RS+EL + +LLVG + ++W +S+A + + S Sbjct: 22 EKTEEPTAKKRADARKKGQVGRSQELNTAFVLLVGFFSLKLLWDSIYLSIATYTTYVFS- 80 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 L+ N + +G II+L + A P++ ++++ L GL FS +S++ Sbjct: 81 NLNQTVDTENIIRIFIGIIIVLAKTA----FPIMLFIMVIGLAINFFQVGLNFSAESIEF 136 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 K KLNP+ G R+FS + EL K+ K I++G FFL+ + + M + + Sbjct: 137 KLDKLNPINGFGRIFSKRALVELAKSFFKIIVIG----FFLYRFIHEQILAMPQFMFFDL 192 Query: 183 GNAMDLVGLCAL---LVVLGVIPMVGF-DVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 ++ LV +V+GVI ++ F D +Q + + L+M++Q+++DE KQ+EGDP Sbjct: 193 TTSLALVAEIIFQMAFIVIGVIMIMAFCDYGYQRWQTTQDLKMTKQEVKDEMKQTEGDPQ 252 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +KG+IRQ QR A RMM +VPKADVI+ NPTHY+VAL Y E M AP VVAKG LVA Sbjct: 253 IKGKIRQKQRQMAMARMMKEVPKADVIITNPTHYAVALSY-EQGMVAPTVVAKGQDLVAQ 311 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 RI+EIG + VP +E PLAR LY ++G +P +LY AVAEVLA+V++LK R Sbjct: 312 RIKEIGRDARVPIIENKPLARTLYAAVQVGDAVPHELYQAVAEVLAYVYRLKHAR 366 >UniRef50_D1B6A6 Flagellar biosynthetic protein FlhB n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6A6_THEAS Length = 366 Score = 232 bits (591), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 149/384 (38%), Positives = 216/384 (56%), Gaps = 62/384 (16%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGV-SVIWFGGVSLARRLSGMLSAG 63 +++KTE TP + KAREEGQ+ +S++LT+ +++ G+ V+ FGG RRL + + Sbjct: 14 AEEKTEPATPRKRRKAREEGQVTKSQDLTAAVVIASGLLGVLVFGGFFF-RRLQLLFAQV 72 Query: 64 LHFDHSIINDPNLILGQIILL-----IREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + + DP++ + +LL + +L PL L AL GL+ + K Sbjct: 73 MGY----LKDPSMGGEEWLLLPFSRALGSYLLIWFPLGLACALAALGLMAYQVGLMITPK 128 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAI-----------------LKTIL------V 155 L P +++NP+ G+K+MFS ++ E+LK + L T+L Sbjct: 129 PLVPNLNRMNPVSGMKKMFSGRSFVEMLKGVLKALILLLMLYGALRKDLLTLLGAIGQPF 188 Query: 156 GSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSH 215 G G +W W M++ +L+VLG+ FD +Q + Sbjct: 189 GEGLGLVMWRVWVLCMKM------------------TLMLMVLGL-----FDYAYQRWEF 225 Query: 216 LKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVA 275 + +RMS+Q+I++E+KQ EGDP VK RIRQ QR ARRRMM+DVPKADV++ NPTH +VA Sbjct: 226 ERSIRMSKQEIKEEYKQMEGDPLVKRRIRQRQRELARRRMMSDVPKADVVITNPTHVAVA 285 Query: 276 LQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQL 335 L YD AP V+AKG GL+A RIREI EN VP ++ PPLARA+Y E+G++IP L Sbjct: 286 LSYDRKVAEAPVVLAKGKGLIAQRIREIARENRVPVVQNPPLARAIYAQVEVGEEIPESL 345 Query: 336 YAAVAEVLAWVWQLKRWRLAGGQR 359 Y AVAEVLA+V +RL GG R Sbjct: 346 YKAVAEVLAFV-----YRLRGGAR 364 >UniRef50_A8MHF6 Flagellar biosynthetic protein FlhB n=2 Tax=Alkaliphilus RepID=A8MHF6_ALKOO Length = 362 Score = 232 bits (591), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 136/359 (37%), Positives = 215/359 (59%), Gaps = 26/359 (7%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGV----SVIWFGGVSLARR----L 56 S++KTE TP +++ ARE+G + +S+E+ S LILL + F GVSL Sbjct: 11 SEEKTEQATPKKIKDAREKGNVLQSKEVNSALILLAIFIIINAFATFIGVSLLNMTRAVY 70 Query: 57 SGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFS 116 + LSA + F NL + I L+I +A+ P+ ++V LIS G++ + Sbjct: 71 TEFLSANIAFSVK-----NLQILSIKLMIY-FFIAVGPIALTSLVVGLISSYAQVGVLLT 124 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 K L +K+NP+ G K+MFS ++ ELLKA ++ V G+ + + + ++ E Sbjct: 125 SKPLMFDLNKINPIEGFKKMFSMRSVVELLKAFIRL----GVIGYISYDYVKGQVGVILE 180 Query: 177 SPITAMGNAMDLVGLCALLVVLGV------IPMVGFDVFFQIFSHLKKLRMSRQDIRDEF 230 + T M + L + ++ V +G+ I + D ++Q + + K L+MS+Q+I++E+ Sbjct: 181 T--TGMDISSILKAIMSMTVDIGIKAGIALIALAVLDYYYQRYEYNKNLKMSKQEIKEEY 238 Query: 231 KQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVA 290 KQ+EG+P +K +I++ QR A RRMM DVP ADVI+ NPTH+++ ++YD N+ APKV+A Sbjct: 239 KQTEGNPQIKSKIKEKQRQMAMRRMMQDVPSADVIITNPTHFAIGIKYDLNEFDAPKVIA 298 Query: 291 KGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 KG L+A I++I ENNV +E PLARALY E+GQ +P LY AVAEVLA+V+++ Sbjct: 299 KGQDLIAQNIKKIALENNVTVVENKPLARALYDSVEVGQFVPPDLYQAVAEVLAYVYRI 357 >UniRef50_Q3A5E5 Flagellar biosynthetic protein FlhB n=3 Tax=Deltaproteobacteria RepID=Q3A5E5_PELCD Length = 351 Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 137/363 (37%), Positives = 225/363 (61%), Gaps = 25/363 (6%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIW-FGGVSLARRLSGM 59 M+D ++TE T R R++GQ+ +S+E+ + L+ G ++W F R LS M Sbjct: 1 MADSDQERTEQATGKRRADFRQKGQVAQSKEVHTA-ALMTGTLLLWTFYAPLFWRTLSDM 59 Query: 60 L----SAGLHFDHSIINDPNLI--LGQIILLIREAMLALLPLISGVVLVALISPVMLGGL 113 L S F+ + ++ L+ LGQ I L+ L P++ +++ ++S + G Sbjct: 60 LHHLWSLAGDFEVTPVSAVMLLGQLGQKIALL------LAPIMLTTLVIGILSSYLQVGW 113 Query: 114 VFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL 173 +F+ K L P FSK+NP+PG+ ++ S ++ E++K++LK LVG V + + Q + L Sbjct: 114 LFTTKPLAPDFSKMNPVPGLAKLISKRSFIEVVKSLLKVFLVGVVAYKVILAEFGQALDL 173 Query: 174 ----MAESPIT-AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRD 228 + +S + A A L+ C ++++L ++ D F + +K++M++Q+ ++ Sbjct: 174 VDMDINDSVVYLARVAARILLRTCGVMILLALL-----DFLFVRWEMEQKMKMTKQEQKE 228 Query: 229 EFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKV 288 E K+SEGDP +K RIR MQ AARRRMMA+VPKADV++ NPTH SVAL YD ++MSAP++ Sbjct: 229 EHKESEGDPQIKARIRSMQMQAARRRMMAEVPKADVVITNPTHLSVALAYDRSRMSAPQI 288 Query: 289 VAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 VAKGA VA+RIREI E+ VP +E P+AR L++ ++G+ +P +++ AVAE+LA+V+ Sbjct: 289 VAKGADAVAMRIREIAREHKVPLVENKPVARVLFK-VDLGKDVPEEMFQAVAEILAYVYG 347 Query: 349 LKR 351 LK+ Sbjct: 348 LKK 350 >UniRef50_C0QA53 FlhB2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QA53_DESAH Length = 357 Score = 231 bits (589), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 132/344 (38%), Positives = 212/344 (61%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE + +LEKAREEGQ+ +S E+ S+++LL GV + + +RL +L GL F Sbjct: 10 EKTEGASSKKLEKAREEGQVAKSTEVPSVVVLLAGVLALNAFAFFIYQRLILVLQDGLSF 69 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 +++ ++ + + + + L PL+ V + AL+S + G V S K++ PKFS+ Sbjct: 70 TGIPLSNDVAVVHLLFVATQRLFIILGPLLLAVFVAALVSNIFQVGFVLSWKAVAPKFSR 129 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 ++P+ G + FS++ E LK+ILK ++ VT + ++RL + + Sbjct: 130 IDPIKGFAQKFSSRALMEFLKSILKIAIIFGVTYMVVKSEVENIIRLYDHGVAAILLYVL 189 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 + + V+L + + D FQ + ++ +M++Q+++DE KQ+EGDP VK RIRQ+ Sbjct: 190 KVSLEIFIKVILVMAVLAAIDFAFQRWKFMEDQKMTKQEVKDEHKQAEGDPQVKARIRQL 249 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 Q AAR+RMM+DVP+ADV+V NPT ++A++YD M+AP +VAKGAG VA IR I E Sbjct: 250 QATAARKRMMSDVPEADVVVTNPTRLAIAIRYDGMTMNAPTIVAKGAGAVAANIRRIAEE 309 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +NVP +E LAR LY+ E+GQ++P + + AVAE+LA V++LK Sbjct: 310 SNVPLVENKALARNLYKIVEVGQEVPTEEFQAVAELLAQVYKLK 353 >UniRef50_C5SN70 Flagellar biosynthetic protein FlhB n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SN70_9CAUL Length = 355 Score = 231 bits (589), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 129/359 (35%), Positives = 214/359 (59%), Gaps = 15/359 (4%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+DE +DKTE + +LE+AR++G + +S ++ L L+ +++ G +A L+ L Sbjct: 1 MADEGEDKTEEASARKLEEARKKGDVAKSADVPQALSLIAACALVMLYGDKIALSLTETL 60 Query: 61 SAGLHFDH----SIINDPNLILGQIILLIREAMLALLPLISGVVLVA----LISPVMLGG 112 + H S++ D L + + M +LP+I+ ++LVA I + G Sbjct: 61 RVFVAAPHLLRDSLMGDGGLTIAHHL------MGQVLPIIALILLVAGAAGAIGSLAQTG 114 Query: 113 LVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMR 172 L+FS + L+P FSKLNP+ G KR+F + K ++K I VG +T L + Sbjct: 115 LMFSTEKLKPDFSKLNPMAGFKRLFGVDALIQFAKTVIKLIAVGVITWMILKGRAGDVAG 174 Query: 173 LMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQ 232 L SP+ + A ++ A+ V L ++ G D F Q ++++M++ +++DE+KQ Sbjct: 175 LAGASPLMVLPYAKEVFFSLAVAVCLFMLLEGGADYFIQKLRFSQRMKMTKTEVKDEYKQ 234 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 +EGDPHVKGR++Q++ +R+RMMA+VPKA V++ NPTHY+VAL+YDE + AP VAKG Sbjct: 235 TEGDPHVKGRLKQIRMEKSRQRMMANVPKATVVITNPTHYAVALRYDE-ETPAPLCVAKG 293 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +AL+IRE+ ++++ +E PPLARALY ++ + IP + AVA+++++V KR Sbjct: 294 VDTLALKIREVAGDHDIAIVEDPPLARALYAAIDVDEIIPETHFQAVAKIISFVMVRKR 352 >UniRef50_A5I580 Flagellar biosynthetic protein n=19 Tax=Bacteria RepID=A5I580_CLOBH Length = 609 Score = 230 bits (587), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 130/353 (36%), Positives = 212/353 (60%), Gaps = 9/353 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSREL----TSLLILLVGVSVIWFGGVSLARRLSGML 60 S++KTE TP + AR++GQ+ +S+EL T L LV V++ +G L ++G L Sbjct: 262 SEEKTEEATPRKKMDARKKGQVAKSKELALAFTLLACTLVLVALGEYGANELKETMAGFL 321 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + L+ + +N NL I+ ++R + +LP+ ++ + + + G +F+ + L Sbjct: 322 NNYLNME---LNYNNLNSLAILTVLRVGKI-VLPVALPIMCFGIAANYLQTGFLFTKEPL 377 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +P F KLNP+ G KRMFS +T ELLK + +VG V FL ++ +++ L P Sbjct: 378 KPDFKKLNPINGFKRMFSLRTVMELLKDLTIITVVGIVGYKFLQDNYLKILNLGTLRPWY 437 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + L + L ++ + D +Q + + K L+M++Q++++E+KQ EGDP +K Sbjct: 438 MITGLLSLAISIFFRITLIMLFIAVADYVYQKYQYNKDLKMTKQEVKEEYKQDEGDPQIK 497 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +I+Q QR A +RMM +VPKA V+V NPTH +VAL+Y++ +APKVVAKGA VA++I Sbjct: 498 SKIKQKQREMAMQRMMQEVPKATVVVTNPTHIAVALRYEKGD-TAPKVVAKGADYVAIKI 556 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 ++I N VP +E PLAR +Y EI ++P +Y AVAE+LA V+ LK+ + Sbjct: 557 KDIAKNNEVPVIENKPLARLIYEKVEIDSEVPQDMYEAVAEILAIVYTLKKKK 609 >UniRef50_B2A365 Flagellar biosynthetic protein FlhB n=3 Tax=Bacteria RepID=B2A365_NATTJ Length = 363 Score = 230 bits (586), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 127/358 (35%), Positives = 218/358 (60%), Gaps = 23/358 (6%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +KTE PTP ++R++GQ+ +S ELTS L+L+ S ++ + ++ Sbjct: 13 NQEKTETPTPKHRRESRKKGQVAKSTELTSALLLMATFSTLY---IVFPYSFDRFMNFAK 69 Query: 65 HFDHSIINDPNLILGQI----ILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 F S IN N + +I I ++ E + P+I VL+ LIS +M G++ +G L Sbjct: 70 QF-WSNINTINYTMDEIHSLLITMMMEGAVFAAPVIIVAVLIGLISNLMQVGILLTGDPL 128 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWH----HWPQMMRLMAE 176 +PK +L+P+ G +++FS + EL K++ K +++G + + L++ H+P + Sbjct: 129 KPKLERLDPIKGFQKIFSKRAVVELTKSLFKMVVIG-IIAYILFNNHMEHFPYFYDM--- 184 Query: 177 SPITAMGNAMDLVGLCALLVV---LGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQS 233 T M A+++ L L+ + ++ + D +Q++ H + L+M++Q ++DE KQ+ Sbjct: 185 ---TVMQIAVEVGQLTWALIFRVGMALLFLSILDYVYQVWEHEQNLKMTKQQVKDEHKQT 241 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EGDP V+ ++++ QR +++RMM++VP+ADV++ NP H +VAL+YDE +AP V+AKG Sbjct: 242 EGDPQVRSKMKEKQREISKKRMMSEVPEADVVITNPVHIAVALKYDEGD-TAPMVLAKGQ 300 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 G VA +I+EI ++NV +E LAR+LY EIG IP +LY AVAEVLA+V++LK+ Sbjct: 301 GHVARKIKEIAEDHNVVVMENRQLARSLYFSVEIGDFIPEELYQAVAEVLAFVYRLKK 358 >UniRef50_Q5DY36 Lateral flagellar export/assembly protein (FlhB-like) n=11 Tax=Enterobacteriaceae RepID=Q5DY36_ECOLX Length = 379 Score = 229 bits (584), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 140/380 (36%), Positives = 221/380 (58%), Gaps = 21/380 (5%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSREL---TSLL--ILLVGVSVIWFGGVSLAR 54 M+D S ++KTE P+ +L KAREEGQ+PRS+++ SL +++ S W+ Sbjct: 1 MADSSSEEKTEKPSAQKLRKAREEGQLPRSKDMGLAASLFAAFVVISSSFPWYADFVRES 60 Query: 55 RLSGMLSAGLHFDHSIINDPNLILGQII----LLIREAMLALLPLISGVVLVALISPVML 110 +S +H IN+P+ I GQ + L++ + +L LLP+ + AL+S ++ Sbjct: 61 FIS------VHQYAQEINNPDAI-GQFLRHHLLILGKFILTLLPMPAA----ALLSSLVP 109 Query: 111 GGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQM 170 GG +F K + P FSK++PL GI+R+FS++ AE K +K+ +V + L +++ Sbjct: 110 GGWLFLPKKILPDFSKISPLKGIRRLFSSEHLAETGKMTVKSAVVLVMLWVSLRNNFAAF 169 Query: 171 MRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEF 230 + L A AM + + L V+ I DV K L+M++Q +++E+ Sbjct: 170 LGLQALPFKLAMNDGLSLYASVMRNFVILFIFFALLDVPLAKALFTKGLKMTKQKLKEEY 229 Query: 231 KQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVA 290 K EG P VK R+R++QR A ++ VPKA+V++ NPTHY+VALQYD+++ +AP VVA Sbjct: 230 KNQEGKPEVKARVRRLQRQLAMGQIRKVVPKANVVITNPTHYAVALQYDQSRAAAPFVVA 289 Query: 291 KGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 KG +AL IR++ AE+ V +E P LAR++Y ++ QQIP QLY A+A VL +V Q+K Sbjct: 290 KGTDEIALYIRQVAAESQVEVVEFPRLARSVYYTTQVNQQIPFQLYRAIAHVLTYVLQMK 349 Query: 351 RWRLAGGQRPVQPTHLPVPE 370 WR RP H+ +P+ Sbjct: 350 HWRDGAQPRPALNRHISIPK 369 >UniRef50_Q0ANB5 Flagellar biosynthetic protein FlhB n=3 Tax=Hyphomonadaceae RepID=Q0ANB5_MARMM Length = 363 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 140/364 (38%), Positives = 219/364 (60%), Gaps = 16/364 (4%) Query: 1 MSDESDD--KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ DD KTE PT RL+ AR++G + +S+E+ +L G++++ F ++R L+G Sbjct: 1 MAEGEDDSQKTEEPTQRRLDDARKKGDVAKSQEIPGWFVLAAGLALLSFIFPMMSRALAG 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVA-LISPVMLGGLVFSG 117 L H +P ++G ++ + ++A++ L G++ VA + G++F+ Sbjct: 61 NLEVFFEQPHDFAINPGAMMG-LMQAVAWQVVAIVGLPIGLLAVAGFAGHYVQQGMLFTT 119 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 + +QPK SKLNP+ G KR F Q A LK + K LV +V F + +P+ ++A Sbjct: 120 EKIQPKLSKLNPIEGFKRNFGPQGLANFLKGVGKMALV-AVAAFLVI--YPKR-EILAGL 175 Query: 178 PITAMGNAMDLVG------LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFK 231 P +G+ + LV L A L V VI G D FQ S +K+ RMSR++I+DE K Sbjct: 176 PALDIGSLLSLVRQGAIELLLAALTVYAVI--AGLDYIFQRQSFMKRNRMSRREIKDEMK 233 Query: 232 QSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAK 291 QSEGDP V+ ++RQ+++ ++RRMM VP A V+V NPTHY++AL Y + + AP VAK Sbjct: 234 QSEGDPLVRAKLRQLRQERSQRRMMTKVPDATVVVTNPTHYAIALHYVQGETPAPVCVAK 293 Query: 292 GAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 G VALRIRE+ E++VP +E PPLARAL+ A++ ++IP + + AVA+V+ +V L + Sbjct: 294 GVDEVALRIRELAEEHSVPIVEDPPLARALHATADLDEEIPTEHFQAVAKVVGYVLSLSQ 353 Query: 352 WRLA 355 R A Sbjct: 354 GRRA 357 >UniRef50_C1DW37 Flagellar biosynthetic protein FlhB n=3 Tax=Sulfurihydrogenibium RepID=C1DW37_SULAA Length = 352 Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 128/348 (36%), Positives = 206/348 (59%), Gaps = 11/348 (3%) Query: 8 KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFD 67 KTE TP R +KAREEGQ+ +S ++ L L V V+ F L + L G +F Sbjct: 7 KTEKATPKRRQKAREEGQVLKSTDVAVALSLFVVFLVMIFYIPFLYKYLLG------YFK 60 Query: 68 HSIINDPNLI---LGQIILLIREAMLALL--PLISGVVLVALISPVMLGGLVFSGKSLQP 122 ++ N LI G+ + +LA+L P +S + +V +++ V G +F+ K L P Sbjct: 61 YTFSNPFYLIPEESGKNFIWFTFKVLAILILPFVSILFIVGIVANVAQFGFLFTLKPLTP 120 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 K SK+NP+ G++R+FS T EL+K+ILK L V+ F + + + M + + + Sbjct: 121 KLSKINPISGLQRLFSLSTLFELVKSILKLSLALFVSYFLVSYLLDGFLVYMTANINSQI 180 Query: 183 GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 + + + IP+ D F++ + + + L+M++ ++++E K EG+P VK Sbjct: 181 YILAKTIIILIMAFTFLSIPIAIADFFYRRYEYEENLKMTKDEVKEERKSYEGNPIVKKE 240 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 IR+ R A +RM+A+VPKADV++ NP HY+VAL+Y++ KM AP+V+AKG L+AL+I+E Sbjct: 241 IRKRMRQLALKRMIAEVPKADVVITNPDHYAVALKYEKGKMKAPQVIAKGQDLIALKIKE 300 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 + E+NV +E PPLAR+LY E+G IP Y AVA++LA +++ K Sbjct: 301 VAKEHNVKIVEDPPLARSLYSSCEVGDYIPEDFYEAVAKILAVIYKQK 348 >UniRef50_B9L5B0 Flagellar biosynthetic protein FlhB n=2 Tax=Thermomicrobia (class) RepID=B9L5B0_THERP Length = 363 Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 139/364 (38%), Positives = 211/364 (57%), Gaps = 34/364 (9%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVI-WFGGVS-------LARRL 56 + ++TE TP R ++AR+ GQ+PRS +LTS L+LL G + W+ G + L R Sbjct: 2 ASERTERATPRRRQEARKRGQVPRSADLTSALVLLAGAFFLPWYAGAAGQTLWDYLERAF 61 Query: 57 SGMLSAGLHFDHSIINDPNLIL-----GQIILLIREAMLALLPLISGVVLVALISPVMLG 111 SG L L P+++ G +L + LP++ V + S ++ Sbjct: 62 SGPLPRDL-------TGPDIVALAWASGATVLKL------ALPILGLFAAVGVASTLVQA 108 Query: 112 GLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMM 171 G VF+ L+P + +++P+ G +R+FS + E KA+LK +V +VT + P+ Sbjct: 109 GFVFAPAVLKPDWRRIDPIAGFQRLFSRRGLFETGKALLKIAIVLAVTYPLIQRDLPRYA 168 Query: 172 RLMAESPIT---AMGNAM-DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIR 227 L P A+G +M DL A+ V + + D FQ + ++LRM+R +++ Sbjct: 169 DLTGAEPAAIAQAIGQSMRDL----AVRVGAAYLALAILDYGFQRWDLEQRLRMTRHELK 224 Query: 228 DEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPK 287 +E +Q+EGDP +K RIR++QR A RRMMA VPKA V+V NPTH +VAL+Y+ M AP Sbjct: 225 EELRQTEGDPEIKARIRRLQRQMAMRRMMAQVPKATVVVTNPTHLAVALRYEPRSMRAPV 284 Query: 288 VVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW 347 VVAKGAG VA RI I ++ +P L PLA+ALYR E+GQ+IP LY AVA+++A+V+ Sbjct: 285 VVAKGAGAVAERITAIARQHTIPVLRNQPLAQALYRTVEVGQEIPITLYEAVADIIAYVY 344 Query: 348 QLKR 351 +L+R Sbjct: 345 RLRR 348 >UniRef50_C1SNG6 Flagellar biosynthetic protein FlhB n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNG6_9BACT Length = 352 Score = 228 bits (580), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 133/359 (37%), Positives = 208/359 (57%), Gaps = 18/359 (5%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+DE + KTE PT +L A+ EG + +SREL + + LL+ ++ G L L+ ++ Sbjct: 1 MADEQE-KTEDPTGKKLTDAKNEGNVAKSRELPAAVTLLLVTFFFYYYGPYLMHGLARLI 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + IN + + +I A L L P ++ V++V + S V+ G +F+ K+L Sbjct: 60 REIFMMTNYEINTQSAHKIMLFSIIESAKL-LAPFMALVLVVGVASNVLQTGFMFTPKAL 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 K +++P+ G R FS ++ EL+K++ K +V V + H ++ MA+ Sbjct: 119 SAKLERIDPIKGFGRFFSKKSLVELMKSLFKVFVVTYVAYLIVKKHIVTIIS-MADMDFY 177 Query: 181 AMGNA--------MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQ 232 + + M V L AL + L D FQ + + L+MS+ ++++E KQ Sbjct: 178 DIFSVFGKIVYEIMWKVSLLALFMALA-------DFIFQKYQFKQDLKMSKHEVKEERKQ 230 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 +EGDPHVKGRIR +QR AR+RMM DVPK+DV+V NPTH++VAL+Y + AP V+AKG Sbjct: 231 AEGDPHVKGRIRSIQREMARKRMMDDVPKSDVVVTNPTHFAVALKYSPGEDRAPVVMAKG 290 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 L+ALRI+EI ++ + E PP+AR+L++ +IG +IP LY AVAE+LA V + KR Sbjct: 291 QRLMALRIKEIAKQSGILVHEDPPIARSLFKTVDIGDEIPENLYKAVAEILALVDKFKR 349 >UniRef50_A1T0L4 Flagellar biosynthetic protein FlhB n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0L4_PSYIN Length = 374 Score = 228 bits (580), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 138/380 (36%), Positives = 224/380 (58%), Gaps = 12/380 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD + DKTE + +L+K++ EGQI R++E S +LL + +A + Sbjct: 1 MSDNAQDKTEQASAQKLKKSKGEGQIARAKEFASACMLLGFCLYFYLSFERIAEAALNLF 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALL----PLISGVVLVALISPVMLGGLVFS 116 F + + D + Q+++ + +++ L+ P I VVL LI ++LGG VFS Sbjct: 61 KLNFSFSVATLQDND----QMLIRLNKSLFTLIEIFFPFIFVVVLSTLIGSLVLGGWVFS 116 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 K++QPK KL+ L GIKRM+S +T EL+K+ILK ++ + FL ++ M+ L Sbjct: 117 FKTIQPKLDKLSFLKGIKRMWSLKTLVELIKSILKVAVIVYLLYSFLSNNLLYMLSLQ-R 175 Query: 177 SPITAMGNAMDLVGLCAL-LVVLGVIPMVGF-DVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 PI A A+ L L L ++ ++ + G D+ +Q++ K+++MS+Q++++E KQ+E Sbjct: 176 LPIEASSIAV-LTKLATYSLYIIAILLLYGLIDLPYQLYEFNKQMKMSKQELKEEHKQAE 234 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 G P VK RIRQ+Q+ ++R + VP ADVI+ NPTHY+VA++YD + AP +VAKG Sbjct: 235 GRPEVKQRIRQIQQQMSQRAITKTVPDADVIIMNPTHYAVAIKYDPKRAEAPFLVAKGND 294 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 AL I+ I +NNV + +P LARA+Y ++ Q IP QL+ A+A VL++V QL+R++ Sbjct: 295 QTALFIQRIALDNNVEVVISPALARAIYHTTQLEQMIPNQLFVAIAHVLSYVMQLRRFKK 354 Query: 355 AGGQRPVQPTHLPVPEALDF 374 +P + +P+ F Sbjct: 355 NEIDKPAHLPNFVMPKGFQF 374 >UniRef50_A7HWA1 Flagellar biosynthetic protein FlhB n=9 Tax=Alphaproteobacteria RepID=A7HWA1_PARL1 Length = 359 Score = 227 bits (579), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 133/355 (37%), Positives = 215/355 (60%), Gaps = 10/355 (2%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D+ D +KTE PT +LE+A ++G + +S+E+++ +++ G + I S A L G Sbjct: 1 MADQDDSEKTEEPTHRKLEEAHKKGDLVKSQEVSTWFVMIGGATAIALMAPSTASSLMGS 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L+ L +I D + + + A ++++ ++ +V AL+ ++ VF+ ++ Sbjct: 61 LTVFLAQPETIPMDAEHLRRIWLNVGSSAFMSMIGPLAVLVGAALVGHLIQHAPVFTAEN 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++PK SK++P G++R+F ++ L K ILK +VGSV+ +W ++ +M Sbjct: 121 MKPKLSKISPKEGLQRLFGPKSLMNLAKGILKLTIVGSVSVLIIWPERDRLALMMTWE-- 178 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMV----GFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 + + LV + AL + GVI ++ D F+ +KK RMS Q+++DE+KQ EG Sbjct: 179 --IAQLLPLVQMLALKMFAGVIAVMTVVAALDYLFERMQWMKKQRMSIQEVKDEYKQMEG 236 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DP VK ++RQ++ R+RMMA VP A VI+ NPTHY+VAL+Y++ M AP VVAKG Sbjct: 237 DPTVKAKLRQIRAERGRKRMMAAVPTATVIITNPTHYAVALKYEQG-MGAPVVVAKGVDA 295 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 VA RIRE+G E+ VP +E PPLARAL+ +I Q+I + Y AVAEV+ +V +LK Sbjct: 296 VAFRIREVGQEHEVPIIENPPLARALHATVDIDQEIQPEHYKAVAEVIGYVMRLK 350 >UniRef50_B8CYQ0 Flagellar biosynthetic protein FlhB n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYQ0_HALOH Length = 356 Score = 227 bits (579), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 128/366 (34%), Positives = 211/366 (57%), Gaps = 30/366 (8%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 ++S +KTE PTP RL KAR++GQ+ +S+EL+S L+ G V++F ++ L+ +S Sbjct: 4 NQSGEKTEKPTPRRLRKARQQGQVAKSQELSSAFTLMGGFLVLFFIIKNIIYSLTNRMSY 63 Query: 63 GLHFD-HSIINDPNLILGQIILLIREAMLALLPLISGVVLVA-LISPVMLG----GLV-- 114 L + ++ IND N +L LI +A LISPV+L GLV Sbjct: 64 FLSLEAYNKINDVN---------------SLYILIDSFYFIARLISPVLLASAIIGLVVN 108 Query: 115 -------FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHW 167 F ++P K+NP+ G KR+FS ++ EL+K++ K +V + L + W Sbjct: 109 FLQVGPLFVPDLIKPDLKKINPISGFKRLFSLKSVVELIKSLFKIAIVAILAYLQLKNSW 168 Query: 168 PQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIR 227 ++ L + A+ L+ A+ +++ ++ + D +Q + +++ L+M++Q+++ Sbjct: 169 QTLINLSRQGITEAVAYLGHLIFKVAITIIICLVVLGIADYIYQKWEYIRNLKMTKQEVK 228 Query: 228 DEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPK 287 +E K+ EGDP +K + R+ QR RM+ + +ADV++ NPTH +VAL+YD N M AP Sbjct: 229 EEHKEIEGDPRIKSKRREKQREMTLNRMIKAMEEADVVITNPTHIAVALKYDINSMEAPV 288 Query: 288 VVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW 347 VVAKG G +A +I+E E + +E PLARAL EIG++IP LY AVAEVLA+++ Sbjct: 289 VVAKGEGFIAKKIKEKARELKIEIVENKPLARALNATTEIGEEIPVDLYQAVAEVLAFLY 348 Query: 348 QLKRWR 353 + ++R Sbjct: 349 KNNKYR 354 >UniRef50_A9BHY6 Flagellar biosynthetic protein FlhB n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BHY6_PETMO Length = 363 Score = 227 bits (579), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 131/345 (37%), Positives = 201/345 (58%), Gaps = 6/345 (1%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 DKTE PTP RLEKAREEG IP+S E + L +W L + + L Sbjct: 21 DKTEDPTPRRLEKAREEGNIPQSNEFNMAVSFLSISLFLWIIFEPLLNDIFKVFYDYLSL 80 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 D P +LG I + L+ V+V+ + ++ +F+ KSL+ SK Sbjct: 81 DLDY--SPTDLLGYEITAHMNLYIKLILFFVVAVVVSTLLGMIQTKFLFTFKSLKLDLSK 138 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 +NP+ G KR+FS ++ EL+KA+LK ++G +T + +W +++ L E + Sbjct: 139 INPIKGFKRLFSLRSVVELIKALLKLTILGLLTYNIIKSNWFKILSLAGEETGFSFNVIF 198 Query: 187 DLVGLCALLVVLGVIPMVG--FDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 DLV +L LG++ ++ FD ++Q + + K+L+MS+ +++ E K+ EG+P +K R R Sbjct: 199 DLV--INILFQLGIVLLLLSLFDFWYQRYEYKKELKMSKYEVKQERKEIEGNPEIKQRQR 256 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 ++ R AR RMM VP+ADV++ NPTHY+VA++Y +M AP VVAKG VA +IREI Sbjct: 257 ELMRNLARSRMMQKVPEADVVITNPTHYAVAIEYKAEEMQAPIVVAKGKDEVAFKIREIA 316 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 ++ +P LE P LAR +Y E+ ++IP LY VAEVLA+V++L Sbjct: 317 FKHGIPILERPALAREIYEKVELNEEIPEDLYTLVAEVLAYVYKL 361 >UniRef50_A4Y0Q6 Flagellar biosynthetic protein FlhB n=1 Tax=Pseudomonas mendocina ymp RepID=A4Y0Q6_PSEMY Length = 377 Score = 227 bits (578), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 145/382 (37%), Positives = 237/382 (62%), Gaps = 19/382 (4%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFG------GVSL 52 MS+++ +KTE + H+L+K++E+GQ+ RS++L++ + LL + ++ F G+S Sbjct: 1 MSEQNSGQEKTEEASAHKLKKSKEDGQVARSKDLSTTISLLATLFILKFSAGLFLEGLSD 60 Query: 53 ARRLSGMLSAGLHFDHSII--NDPNLILGQIILLIREAMLALLPLISGVVLVALISPVML 110 + RLS + F HS I +D + +LG +L+ + + +L ++ V++VAL ++ Sbjct: 61 SFRLSY-----IQFGHSEIGLDDLDTLLGYNMLVFIKLLAPML--LTSVLVVAL--SLVP 111 Query: 111 GGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQM 170 GG VFS K+ PK SKLNP+ G+ R+FSAQ +ELLK++LK +++ V + P++ Sbjct: 112 GGWVFSAKNFAPKLSKLNPITGLGRIFSAQNWSELLKSVLKVLVLLGVGYVLVRAALPEL 171 Query: 171 MRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEF 230 + L S + A+ A++L L ++L + D+ Q + LKK+RM++Q+ ++E Sbjct: 172 IALQRSSVVQAISAALNLTFNLILCLMLVFVLFSFIDIPLQRYFFLKKMRMTKQERKEEH 231 Query: 231 KQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVA 290 K EG P VK RI+Q+QR +R++ + ADVI+ NPTHY+VAL+YD K +AP V+A Sbjct: 232 KNQEGRPEVKARIKQLQRQMLQRQISKVIKNADVIIVNPTHYAVALKYDSKKAAAPFVLA 291 Query: 291 KGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 KG AL +R++ ++ + LE PPLARA+Y +I QQIP LY AVA VL ++ QLK Sbjct: 292 KGVDETALYMRQMAKKHELEVLEIPPLARAIYFTTQINQQIPAPLYTAVAHVLTYILQLK 351 Query: 351 RWRLAGGQRPVQPTHLPVPEAL 372 WR +P ++LP+P++L Sbjct: 352 AWRQGRRSKPQLASNLPIPDSL 373 >UniRef50_B1K3A0 Type III secretion exporter n=13 Tax=Betaproteobacteria RepID=B1K3A0_BURCC Length = 379 Score = 226 bits (577), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 142/382 (37%), Positives = 220/382 (57%), Gaps = 22/382 (5%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVI------WFGGVSLARRL 56 ++ DKTE TP +L KAR EGQ+ RSR++ + + +LV + +I W V L + + Sbjct: 4 QQTGDKTEKATPQKLRKARMEGQVARSRDIGTCVGILVALKLIVVLTPAWL--VEL-KHI 60 Query: 57 SGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFS 116 + A L D + N +++ +LL+ + + L + +G+++ +LI GG + S Sbjct: 61 FALSFADLSGDDRLGNAVSMLFPAAVLLMCKMLAPLAAVPAGIIVASLIP----GGWIIS 116 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 K++ PK ++LNPL G+KR+ S + + +LK +++ + + +RL Sbjct: 117 HKNIMPKLNRLNPLSGLKRLVSGKHYMQFGTTVLKALVLMATLFIVCRSNLSGFIRLQGA 176 Query: 177 SPITAM--GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 A+ G + L L ++ V +V V IF + RMS++DI++E KQSE Sbjct: 177 PLADALTGGANLFLSSAVTLSCIITVFALVDIPVQQIIFK--RGQRMSKRDIKEEMKQSE 234 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 G P VK RIRQ+QR AR+ + VP AD++V NPTHY+VAL+YD + AP VVAKG Sbjct: 235 GRPEVKSRIRQIQRQLARQGIRKTVPTADLVVMNPTHYAVALKYDVTRAQAPYVVAKGVD 294 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 VAL IR++ +NV LE PPLARA+Y +++ QQIP +LY AVA+VL++V Q+K +R Sbjct: 295 EVALFIRDVARGHNVEVLELPPLARAIYHTSQVNQQIPAELYRAVAQVLSYVLQIKAFR- 353 Query: 355 AGGQR---PVQPTHLPVPEALD 373 G+R P PT + +PE L Sbjct: 354 -SGRRDVSPSLPTGITIPEHLQ 374 >UniRef50_A4SI11 Lateral flagellar biosynthetic protein, LfhB n=2 Tax=Aeromonas RepID=A4SI11_AERS4 Length = 378 Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 144/376 (38%), Positives = 221/376 (58%), Gaps = 15/376 (3%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 + + DKTE + +L KAREEGQI RS+EL+S +LL+G + + S + ++ Sbjct: 4 NSAQDKTEEASSQKLRKAREEGQIARSKELSSAGLLLLGGLAMQWMVPSFGHFFAELMKR 63 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLALL----PLISGVVLVALISPVMLGGLVFSGK 118 FD DP ++ I EA+L++L PL + L+ ++ ++ GG+V + K Sbjct: 64 PQRFDWQGARDPQMM----IHWTAEALLSMLWVLLPLFGFLALLLVLLSIVPGGMVLTWK 119 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L P KLNPL G+KRM S + ELLK++LK +L+GS L H WP +M + P Sbjct: 120 KLLPSAEKLNPLKGLKRMLSTHSLMELLKSVLKILLIGSTLALMLQHQWPLLMMMNRMPP 179 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMV--GFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 AM A+ + L ++LG + M+ DV +Q +S K+LRM++Q+++DE K SEG Sbjct: 180 QAAMEQALQI--LSQAFILLGSVQMLIAVLDVPYQRWSLNKQLRMTKQEVKDEHKNSEGR 237 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P +K +IRQ+Q AR R+ VP+ADVI+ N THY+VA++YD + +AP V+AKG + Sbjct: 238 PEIKAKIRQVQGMLARARIEQRVPQADVIIVNTTHYAVAIKYDPERANAPYVIAKGVDGM 297 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 A RIR++ +++ + P L RA+Y + Q++P LY AVA VL V QL+ + Sbjct: 298 AERIRQVAKQHDKMVMSLPDLTRAIYYSTRVDQEVPAGLYTAVAYVLNHVLQLRAYAAGK 357 Query: 357 GQR--PVQPTHLPVPE 370 G++ P+ P H+P PE Sbjct: 358 GKKPTPLAPLHVP-PE 372 >UniRef50_B4U884 Flagellar biosynthetic protein FlhB n=3 Tax=Bacteria RepID=B4U884_HYDS0 Length = 353 Score = 225 bits (573), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 128/357 (35%), Positives = 211/357 (59%), Gaps = 20/357 (5%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S++KTE TP+R K + EG + +S+E+ S L++LV ++F G + +L + L Sbjct: 3 SENKTEKATPYRRGKLKSEGNVAKSQEVVSALLMLVSTGALFFIGYKIF-----ILFSDL 57 Query: 65 HFDHSI-INDPNL-------ILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFS 116 D S+ I+DP+ LG L ++ + + PL VL+ + ++ G +F+ Sbjct: 58 ILDGSLRIDDPSFTPSDATKFLG---LSFKKLLSDITPLFILAVLIVVFGYILQFGFIFT 114 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 K L+P FSKLNP+ G+K +FS EL+K LK +L+ + F L+ + ++ Sbjct: 115 FKPLEPNFSKLNPVDGLKNLFSLNALFELVKNSLKVMLLLIASFFILYFSFHTLVFSSYM 174 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMV--GFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 SP + L+ LL+ +G+I ++ G D ++ F + K+++MS+Q+++DEFKQ E Sbjct: 175 SPSKGLSEIARLI--FKLLISIGIIGLMLAGLDFAYKKFDYEKRIKMSKQEVKDEFKQFE 232 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 G+ VK +IR+ +R RMM +VPKA V++ NPTH++VAL+Y + AP VVAKG Sbjct: 233 GNIEVKAKIRRRMMELSRSRMMQEVPKASVVITNPTHFAVALRYIPKQDRAPIVVAKGQD 292 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +A +I EI N+VP + P LARALY+ +I ++IP + Y AVAE++A++ + K+ Sbjct: 293 YMAKKIIEIAELNDVPVVRKPELARALYKAVDIEEEIPPEFYKAVAEIIAYIVKRKQ 349 >UniRef50_A5D0H9 Flagellar biosynthesis pathway, component FlhB n=2 Tax=Clostridia RepID=A5D0H9_PELTS Length = 357 Score = 224 bits (571), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 126/356 (35%), Positives = 213/356 (59%), Gaps = 12/356 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGG----VSLARRL 56 M+ + ++TE TP R+++AR +GQ+ RS +LT L L V++++ + L R L Sbjct: 1 MAGGTQERTEQATPRRIQEARRKGQVARSTDLTGALCLAAMVALLYAVKDEFFLDLQRYL 60 Query: 57 SGMLS--AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLV 114 S AG + P +L +L + M P I+ V+ A++S ++ G + Sbjct: 61 GWYFSQVAGFIASEEV---PGAVLYDTVLFSAKLMA---PFIAVPVVTAVVSNLVQVGFL 114 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 FS ++L PK S LNP G++R+FS+++ EL+K++ K ++G +T + + + ++ + Sbjct: 115 FSTEALNPKLSVLNPATGLQRIFSSRSLVELVKSVFKFTVIGIITYYLIKANLADLLLVF 174 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 P + A + + + D +Q + + K L MSRQ++++EF+Q+E Sbjct: 175 NRPPGGIYREVAGFILKVAGWAAVAYLILSLLDYIYQRYEYKKSLMMSRQELKEEFRQTE 234 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDP +K R R+M+RA + R++++VPKA V+V NPT +VAL+Y++ +M APKVVAKGAG Sbjct: 235 GDPLIKSRQREMRRAISLNRIISEVPKATVVVTNPTSLAVALRYEQGQMPAPKVVAKGAG 294 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +A RI+EI E++VP +E +AR +Y + E+ Q IP ++Y AVAE+LA V++LK Sbjct: 295 RIAGRIKEIAREHDVPIVENKEIARFIYYNVELDQVIPFEIYQAVAEILALVYRLK 350 >UniRef50_UPI0001C3562E flagellar biosynthesis protein FlhB n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3562E Length = 355 Score = 223 bits (569), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 135/359 (37%), Positives = 208/359 (57%), Gaps = 15/359 (4%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS +D+KTE TP R + R++G + +S ++ ++ LLV + + + R L Sbjct: 1 MSVAADEKTEKATPKRRQDERKKGNVFQSSDVIAVCSLLVLFNSLNALAPMIYRTLKA-- 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAML----ALLPLISGVVLVALISPVMLGGLVFS 116 S L F ++ +P L + + +AM A LPL+ V VA+++ L FS Sbjct: 59 SMELFFSYAASTEP-LTAEDLPDKLLKAMFLFGQAALPLLFIGVAVAVVTTFFQTRLSFS 117 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFL---WHHWPQMMRL 173 ++ K +++ L G KRMFS ++ ELLKA++K ++ V ++ H + ++M Sbjct: 118 ADVMKFKMDRISLLKGFKRMFSIRSVVELLKAMIKITILAWVIYSYIKGRIHEFARLMDG 177 Query: 174 MAESPITAMGN-AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQ 232 ++ +G+ A+ LV I + FD +Q + + K LRMS+Q+I+DE+KQ Sbjct: 178 TVQAAFVYVGDTAVSLVNTVGA----AFIFLAAFDYLYQWWEYEKNLRMSKQEIKDEYKQ 233 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 +EGDP +KGRIR+ QR A RMM +VPKADVI+ NPTH++VAL YD N AP V+AKG Sbjct: 234 TEGDPQIKGRIREKQRQMASMRMMQNVPKADVIIRNPTHFAVALGYDSNTNRAPVVLAKG 293 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 A +AL+I E+G N V +E PLAR LY E+ +IP + Y VA+VLA+V++LK+ Sbjct: 294 ADHLALKIVEVGEANGVYIMEDKPLARGLYASVEVDMEIPEEFYQTVAKVLAFVYKLKK 352 >UniRef50_A6M184 Flagellar biosynthetic protein FlhB n=4 Tax=Bacteria RepID=A6M184_CLOB8 Length = 613 Score = 223 bits (568), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 128/369 (34%), Positives = 208/369 (56%), Gaps = 45/369 (12%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELT---SLLILLVGVSVIWFGGVSLARRLSGMLSA 62 DDKTE TP + ++R +GQI RS++++ +++I + +S +W GML+ Sbjct: 266 DDKTEEATPKKKSESRNKGQIARSKDVSVAITMVICTLLISSLW-----------GMLTN 314 Query: 63 GLH--------------FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPV 108 G F+H+ I+ NL + +I + + LP++ G V+ +L+ Sbjct: 315 GFKEVLIYFFNFPMIGDFNHATIS--NLAITTVIKIGSYLLPFALPIMVGGVIASLLQT- 371 Query: 109 MLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWP 168 G + + + L+P F KLNPL G+K M S ++ +L K ++ +V + ++ ++ Sbjct: 372 ---GFIITAEPLKPSFGKLNPLSGLKNMISKRSIVDLSKNLVVITIVSIICYKYISGNYQ 428 Query: 169 QMMRLMAESPITAMGNAMDLV-----GLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSR 223 ++ + + +LV +C +LV++ G D F Q+ H K++RM++ Sbjct: 429 SILGISNLYLPSLSDEVKNLVVGIFKQICIVLVIIA-----GIDYFLQVRMHNKEMRMTK 483 Query: 224 QDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENK- 282 Q+++DE+KQSEGDP +KG+I+Q QR +RMM V A V++ NPTH ++A++Y+E K Sbjct: 484 QEVKDEYKQSEGDPKIKGKIKQRQRELGMKRMMQSVADATVVITNPTHLAIAIKYEEGKD 543 Query: 283 MSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEV 342 M APKVVAKGA VA +I+ I EN VP +E PLAR +Y E+ Q IP LY AVAE+ Sbjct: 544 MEAPKVVAKGADYVAFKIKSIAKENEVPVIENKPLARLMYDRVEVDQDIPQDLYQAVAEI 603 Query: 343 LAWVWQLKR 351 L V +LK+ Sbjct: 604 LVVVMKLKK 612 >UniRef50_Q5FQT1 Flagellar biosynthetic protein FlhB n=1 Tax=Gluconobacter oxydans RepID=Q5FQT1_GLUOX Length = 358 Score = 221 bits (564), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 133/355 (37%), Positives = 201/355 (56%), Gaps = 10/355 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD SDDKTEAP+ RL+KARE+GQI SRE + + LL G + I+ L ++ Sbjct: 1 MSD-SDDKTEAPSSQRLQKAREDGQIVMSREAMNFVALLGGFAGIFMVLPYLVMDFVHVM 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + ++ +L I + +P+ + V ++ L + G + +SL Sbjct: 60 QVLMANAGTVPMAQGGLLNSTDHAIEAGLKLAVPMAATVAVLCLGGGFLQTGFLIHPESL 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWH----HWPQMMRLMAE 176 PKF +++PL G KR+ T + KA+ K + V LW+ P R++ Sbjct: 120 LPKFERISPLAGFKRIAGGGTLPDTFKALAKFAIFAVV----LWNISKGAIPSAPRMVGL 175 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 P + DL A ++L + + GFD+F+ F H+ KL+MSR+D++DE+K +EGD Sbjct: 176 EPGPLLKMMTDLGFRAASAMILAQLVIAGFDIFWMRFRHISKLKMSREDLKDEYKNTEGD 235 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 PHVKGR + ++ AAR+RMMA V A V+V NPTHY+VAL Y+ AP++VAKG V Sbjct: 236 PHVKGRQKALRAKAARQRMMAAVKTATVVVTNPTHYAVALVYERGGGGAPRIVAKGMDDV 295 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 A RIR+I +N +P + PPLARAL+ + +IP + + VA ++A+VW+LKR Sbjct: 296 AARIRDIAQDNRIPIVANPPLARALFT-LPLDSEIPAEHFKVVAAIIAYVWKLKR 349 >UniRef50_A6Q2P0 Flagellar biosynthetic protein FlhB n=2 Tax=Bacteria RepID=A6Q2P0_NITSB Length = 351 Score = 221 bits (564), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 131/357 (36%), Positives = 212/357 (59%), Gaps = 20/357 (5%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSREL----TSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 KTE TP R EKAREEGQ+ +S+++ T +++ ++ ++ I F L + + Sbjct: 6 SKTEKATPRRREKAREEGQVAKSQDIPISATLIVVFMLFLAYIPFAYKKLYELFMFIFAD 65 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLAL-LPLISGVVLVALISPVMLGGLVFSGKSLQ 121 L+ N P II L+ E M L +P +++ ++S + G + + KS+ Sbjct: 66 PLY------NIPQYNYS-IIYLVMEFMGYLTIPFFLALLITGVVSNIAQIGFLLTFKSMV 118 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK K++P+ G+KR+FS +T EL+K ILK I ++ +FL + + + T Sbjct: 119 PKLEKIDPIAGLKRLFSLKTLFELVKNILKLI-AATIVSYFLVQFL--LRDVFQYATTTP 175 Query: 182 MGNAMDLVGLCALLVVLGV----IPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 +A+ LV L+++LG IP+ D FF+ F + ++MS+ ++++E KQ EG+P Sbjct: 176 YKDAVLLVKYT-LIMILGFAILSIPIAAIDFFFRKFEFEENIKMSKHEVKEEHKQMEGNP 234 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 VK IR+ R + R+MA+VPKADV++ NP H++VAL+Y++ KM APKVVAKG +A Sbjct: 235 QVKSEIRKRMREMSMNRIMAEVPKADVVITNPVHFAVALKYEKEKMHAPKVVAKGKDYLA 294 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 L+I+EI E+ VP E PPLARA+Y+ ++ + IP LY A+A++ A V++ +R RL Sbjct: 295 LKIKEIAKEHGVPIEENPPLARAIYQACDVDEYIPENLYKAIAKIFAKVFKRQRRRL 351 >UniRef50_C9XJ38 Flagellar export protein n=7 Tax=Bacteria RepID=C9XJ38_CLODC Length = 604 Score = 221 bits (563), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 123/360 (34%), Positives = 209/360 (58%), Gaps = 19/360 (5%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVI--WFGGV--SLARRLSGML 60 S DKTE TP + + R++G I +S+EL + LL ++ F V +L L+ L Sbjct: 251 STDKTEEATPKKKGEQRKKGNIAKSKELPVAMTLLAFTLLVPTLFSYVVDTLKSSLNYFL 310 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 S + + + + L++ ++ + LP+ +++ +++ + G++F+G++L Sbjct: 311 SLDFYMNINYSSIEKLVIAGLMDFFK----IFLPIAIPFLVLGIVANLFQVGILFTGETL 366 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +P SKLNP+ G K MFS ++ + L+K ++ + F ++ +++L T Sbjct: 367 KPNLSKLNPVSGFKNMFSMRSLSTLIKDTAIISILAYIGYTFFQDNYLDILKLGNIYLPT 426 Query: 181 AMGNAMDLV-----GLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 M DLV +C ++V+ V D +Q +SH K+LRM++Q+++DE+K SEG Sbjct: 427 LMYTVKDLVYSILSKICVAMIVIAVA-----DYVYQRYSHKKQLRMTKQEVKDEYKNSEG 481 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DP +K +I+Q QR + +R M VP A VIV NPTH S+A++Y++ K AP VVAKGA Sbjct: 482 DPEIKAKIKQKQRQISSQRTMQAVPSATVIVTNPTHLSIAVRYEKGKDQAPVVVAKGADY 541 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK-RWRL 354 +A +IREI N++P +E P+AR LY+ EI Q+IP +Y A AE+L V+++K R+++ Sbjct: 542 LAFKIREIAKGNDIPIIENKPIARLLYKQVEIDQEIPEDMYQAFAEILVAVYKIKNRYKV 601 >UniRef50_Q3ADC9 Flagellar biosynthetic protein FlhB n=2 Tax=Bacteria RepID=Q3ADC9_CARHZ Length = 353 Score = 221 bits (563), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 121/354 (34%), Positives = 210/354 (59%), Gaps = 2/354 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+DE D +TEAPTP RL +AR GQ+ +S+EL ++ L+ ++ G ++ + Sbjct: 1 MADEQRDQRTEAPTPRRLAEARRRGQVFKSQELNFAVMFLIFFLLLLVLGGYFYQQFY-L 59 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 LS + + I P+ + G ++ + +LP + +L + ++ G +F+ + Sbjct: 60 LSRNVFRNMFIELTPSAVRGLLLYYFGWSFKIVLPFLLLGMLAGIALNLVQVGFIFTTEP 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+P + ++NPL G R+FS + ELLK LK + V + + P + + + ++P Sbjct: 120 LKPSWERINPLSGFSRIFSRRNWVELLKNFLKFGFLALVIYLRIKSNLPLIFQKIGQAPA 179 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 L+ AL +L + D ++Q + + L+M++Q++++E++Q+EGDP + Sbjct: 180 EYFNGYFSLIKKIALDTLLVLFLFGAVDYWYQRREYYQSLKMTKQELKEEYRQTEGDPLI 239 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K R+R+ QR A ++ +VP+A V+V NP H +VAL+Y+ KM+APKVVAKGAG +A + Sbjct: 240 KARLRERQRQIALNQIAREVPQATVVVTNPVHIAVALKYERGKMAAPKVVAKGAGFLAEK 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 I+EI +NV +E +AR LY++ E+G++IP +LY AVAE++AWV++ KR R Sbjct: 300 IKEIARAHNVEIVENVEVARFLYKNCEVGEEIPEELYNAVAEIIAWVYRKKRKR 353 >UniRef50_Q6MI50 Flagella-associated protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MI50_BDEBA Length = 353 Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 132/371 (35%), Positives = 213/371 (57%), Gaps = 37/371 (9%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M++++ +K+E T R E+ R+ G + ++EL S ++LL ++ G + + + Sbjct: 1 MAEDNGEKSEEATDARREEFRKRGNVAHTKELASAVMLLAAAGGVYALGRFFFKEMYEV- 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVML-GGLVFSGKS 119 F HS +D ++ ++RE G+ + LI+PV+L G++ + S Sbjct: 60 -----FQHSFGDD-------MVKMVREGNFTEAAQYCGMKAMILIAPVLLFAGIIGAASS 107 Query: 120 L------------QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWH-- 165 + P F K+NP+ G KR+FS + E LK+ILK V V F L Sbjct: 108 IVQIGFLQVEDAVSPNFEKVNPVEGFKRVFSMRAVVEALKSILKMGAVAMVLYFLLRSEV 167 Query: 166 -HWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMV--GFDVFFQIFSHLKKLRMS 222 P M+ + I +G V + LL +G + +V G D F+Q F KK+ M+ Sbjct: 168 TQVPYMLTYSIDQIIAYIG-----VIVVKLLGGVGAVMLVIAGADYFYQRFDLEKKMMMT 222 Query: 223 RQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENK 282 +Q++++E KQ EGDP +K RIR++QR A +RMM+++PKADV++ NPTH +V L+Y +N Sbjct: 223 KQEVKEEHKQREGDPMIKSRIRRIQREMASKRMMSEIPKADVVITNPTHIAVVLKYTDN- 281 Query: 283 MSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEV 342 + AP++VA GA VA +I+EI ENNVP +E PLAR +++ +IGQ IP +L+ AVAEV Sbjct: 282 LPAPQIVAMGADHVAEKIKEIARENNVPIVENKPLARTIFKTLKIGQVIPRELFVAVAEV 341 Query: 343 LAWVWQLKRWR 353 L++V++L+R + Sbjct: 342 LSYVYRLRRKK 352 >UniRef50_C0C1N4 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1N4_9CLOT Length = 353 Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 117/349 (33%), Positives = 202/349 (57%), Gaps = 3/349 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +D KTE TP + R+EG I +S ++ +++ + + ++ + + + Sbjct: 3 ADSKTEKATPKKRRDERKEGNIFQSSDVVNVVFVFLSFYILKLIFPGIYETSGNFMKRFI 62 Query: 65 HFDHSIINDPNLILGQI-ILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 SI + +G+ + + A +LP ++ ++ + +F+ K+ +PK Sbjct: 63 SLAGSITDLSGQSVGKYGMEFLSAAARTVLPFACICMVTGIVMHGIQTRFLFTSKNFRPK 122 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG 183 ++++PL GIKR+F+ + EL+K +LK I++ ++ L ++R M S + Sbjct: 123 LNRISPLQGIKRIFALKNAIELVKNLLKVIVLVAIIYTLLKQDAVNVIRTMDMSISASAA 182 Query: 184 NAMDLVGLCALLVVLGVIPMVGF-DVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 D++ + +L V V ++ F D FQ + + +K++MS+Q++++EFKQ+EG+P +KGR Sbjct: 183 YTFDMI-ISMILRVSMVFAVIAFLDYLFQWWDYERKIKMSKQEVKEEFKQTEGNPEIKGR 241 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 IR +Q+ AR RMM VP ADVI+ NPTH++VAL YD K +AP VVAKG +ALRI Sbjct: 242 IRDIQKQRARSRMMQAVPNADVIIRNPTHFAVALSYDTEKNNAPVVVAKGVDELALRIVR 301 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 G EN+V +E PLAR+LY E+ ++IP + Y AVAE+L +V++L + Sbjct: 302 TGEENHVAVIEDRPLARSLYAETELNREIPSEYYGAVAEILVYVYKLNK 350 >UniRef50_A6D5X3 Flagellar biosynthetic protein n=4 Tax=Gammaproteobacteria RepID=A6D5X3_9VIBR Length = 382 Score = 220 bits (560), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 128/374 (34%), Positives = 206/374 (55%), Gaps = 15/374 (4%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS+ D DK+E P+ H+L KAR EGQ+PR++E S + L+ V+ + + Sbjct: 1 MSEHQDSGDKSEQPSQHKLSKARREGQVPRAKEFVSSVTLISVVAYYVLNIDMIKQTFIE 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + FD I+ + + + ++ PL+ ++ A+ +LGG + S Sbjct: 61 LFLVSFQFDTQTISHWMTSVELLGTALFSMVMLFFPLLIYQIIAAIFGSTLLGGWILSPS 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L PK K++P+ GIKR+FS Q+ EL K + K L S+ + + + + L++ Sbjct: 121 LLTPKLEKISPIKGIKRIFSTQSVVELFKNVFKVTLFFSLLYWVISSYISVITNLVSAHF 180 Query: 179 ITAMGN----AMDLVGLCALLV-VLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQS 233 T + ++ +G L+V + G+ FD +Q K+++M++Q+++DE K+ Sbjct: 181 DTVVFTVATITIEYLGYLLLIVLIFGL-----FDFPYQRHEFTKQMKMTKQEVKDEHKEQ 235 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EG P VK RIRQ+Q A+R VPKA+V++ NPT Y+VAL YD + AP VVAKG Sbjct: 236 EGRPEVKARIRQIQTQNAKRGANERVPKANVVLTNPTQYAVALIYDLTQAEAPFVVAKGK 295 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 VA+ IRE+ A+++V +E+ L RA+Y ++ Q +P QL+ A+A +L +V QLK WR Sbjct: 296 DEVAVYIRELAAKHSVEVVESAELTRAIYNTTQVDQMVPNQLFVAIAHILTYVNQLKAWR 355 Query: 354 LAGGQRPVQPTHLP 367 GQR +P LP Sbjct: 356 --QGQRS-KPNGLP 366 >UniRef50_A9KNE0 Flagellar biosynthetic protein FlhB n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KNE0_CLOPH Length = 373 Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 134/366 (36%), Positives = 202/366 (55%), Gaps = 40/366 (10%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL-- 64 +KTE T +LE AR+EGQ+ RS++L + LL VI + SG ++ G Sbjct: 25 EKTEEATTKKLEDARKEGQVARSQDLITASGLLALFMVI--------KLFSGYIAGGFLD 76 Query: 65 HFDHSIINDPNLILGQIILLIREAM---------LALLPLISGVVLVALISPVMLGGLVF 115 F S L ++ I + L LP+ V+VA + + Sbjct: 77 AFSKSYKEIETLAKEEMTYQIGSKLMNQMGINILLICLPVFITGVVVAFVVNIFQVKWKL 136 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAI---------LKTILVGSVTGFFLWHH 166 +GK LQPKF+K+NPL G K+M S EL+K+I + L + +L + Sbjct: 137 TGKPLQPKFNKINPLSGFKKMLSMDKIMELVKSIIKVGIIIYIVYNALKDELGKLYLLYE 196 Query: 167 WPQMMRLMAESPITAMGN-AMDL-VGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQ 224 + E I +G+ +DL + + L +V+G+ D +Q K +RM++Q Sbjct: 197 MGNL-----EVVIAYIGSIVLDLGIKISVLFIVVGLA-----DFIYQKIKFKKDMRMTKQ 246 Query: 225 DIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMS 284 +I+DEFKQSEGDP +K +I+Q R A++RRMM +P+ADV++ NPTH++ AL+YD+ Sbjct: 247 EIKDEFKQSEGDPQIKSKIKQKMRQASQRRMMQRLPEADVVITNPTHFACALKYDKEVSE 306 Query: 285 APKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLA 344 AP ++AKGA L+A +I+EI EN +P +E PLAR LY + +I +IPG+LY VAEVLA Sbjct: 307 APILIAKGADLLAAKIKEIAKENEIPIVENKPLARMLYYNVDIESEIPGELYQMVAEVLA 366 Query: 345 WVWQLK 350 +V+ LK Sbjct: 367 YVYSLK 372 >UniRef50_B0MPC8 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPC8_9FIRM Length = 353 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 132/360 (36%), Positives = 214/360 (59%), Gaps = 21/360 (5%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIW--FGGVSLARRLSGMLSAG 63 ++KTE TP + + R++G++ +S+E+ ++ + +VG+ FG L+ M + Sbjct: 4 EEKTEKATPKKRKDTRKKGEVLQSKEV-AVAVFVVGIFAFLAIFGNYMFQMLLNFMEQSM 62 Query: 64 LHFDHSIINDPNLILGQIILLIREAMLALL---PLIS-GVVLVALISPVMLGGLVFSGKS 119 D + N + + + + A++ + P+++ GVVL L V GL FS ++ Sbjct: 63 SSIDKT----GNTVEFAMSVFWKVAIICICTVGPILAVGVVLSVLPVIVQTKGL-FSMEA 117 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++PKFS+LNP GIKR+FS Q L+K +++ I+V ++ F + + +L+ I Sbjct: 118 MKPKFSRLNPFTGIKRLFSMQALVGLVKGLIEIIVVVAILYFQVMDRINEFKKLIDTDVI 177 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGF----DVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 + + A+ +++ + M+ F D FQ +S KKL+MS+Q+++DE+KQ EG Sbjct: 178 KIVA----YISETAMSLIVTIFVMLVFVAAADYVFQWWSFEKKLKMSKQEVKDEYKQLEG 233 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYD-ENKMSAPKVVAKGAG 294 DP +KG+I++ Q+ A++RMM +VP ADV+V NPTHY+VAL+YD + AP VVAKG Sbjct: 234 DPQIKGKIKRKQQEMAQQRMMQEVPSADVVVRNPTHYAVALKYDRKTAYRAPVVVAKGTD 293 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 +ALRI + E+NV E PLAR LY +IGQ+IP + Y AVAEVLA V++ + RL Sbjct: 294 ALALRIVAVAQEHNVYITENRPLARGLYEAVDIGQEIPREFYTAVAEVLAMVYEEQHKRL 353 >UniRef50_A7FED7 Flagellar biosynthetic protein FlhB n=25 Tax=Enterobacteriaceae RepID=A7FED7_YERP3 Length = 377 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 132/375 (35%), Positives = 209/375 (55%), Gaps = 8/375 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ S +K+E PT +L KAR++G IPRS+++T + LV ++ + + L Sbjct: 1 MSNSSGEKSEKPTTGKLSKARKKGDIPRSKDVT-MAAGLVTSFILLSLFLPYYKELISQS 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + S +ND L Q +L L + + L ++++ ++ GG F+ L Sbjct: 60 FVSVSQLASQLNDQG-ALEQFLLANLFIFAKFLATLVPIPLFSMLATLIPGGWNFTPVKL 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA---ES 177 P KL+PL GIKR+FSA G E+LK + K +V + ++ L E Sbjct: 119 IPDLKKLSPLAGIKRIFSASNGTEVLKMLAKCSIVLYTLYLVVHSSLDDLLHLQTLPLEE 178 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 IT G A L + ++ V ++ + +F+ KK++M++Q+++ E K ++G+P Sbjct: 179 AIT-QGFAQYHHILLYFIAIVVVFAIIDIPLSHHLFT--KKMKMTKQEVKQEHKNNDGNP 235 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K R+RQ+QR A ++ VP ADVI+ NPTH+SVAL+Y K SAP +VAKG +A Sbjct: 236 EIKSRVRQLQRQYAIGQINKTVPSADVIITNPTHFSVALKYAPEKASAPYIVAKGKDDIA 295 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 L IR I ++ + +E PPLARA+Y ++ QQIP QLY A+A+VL +V Q+K WR Sbjct: 296 LYIRSIAQKHKIEIVEFPPLARAIYHTTKVNQQIPAQLYRAIAQVLTYVMQIKSWRSGQA 355 Query: 358 QRPVQPTHLPVPEAL 372 +PV THL +P+ + Sbjct: 356 SKPVLNTHLGLPKEM 370 >UniRef50_A4YXU5 Flagellar biosynthetic protein FlhB n=12 Tax=Bradyrhizobiaceae RepID=A4YXU5_BRASO Length = 359 Score = 218 bits (554), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 142/367 (38%), Positives = 206/367 (56%), Gaps = 31/367 (8%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++E D DKTE PT RL++A E G + +S+EL + ++ V+ SG Sbjct: 1 MAEEGDTEDKTEDPTQKRLDQALERGDVVKSQELNTWFVIAAATLVM--------TTFSG 52 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREA-MLALLPLISGVVLVALISP---VMLGG-- 112 + + ++ NLI ++ A +LAL +S V+ A+ P VML Sbjct: 53 SIGTAV-----LVPMRNLIANSWMIHTDGAGLLALARSLSFAVIAAIGVPILMVMLAAIA 107 Query: 113 -------LVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWH 165 LV+SG+ L+P SK++PL G KR+F Q A K + K +L+G+V LW Sbjct: 108 GNMMQHRLVWSGEPLKPSLSKISPLSGAKRLFGKQAAANFAKGLFKLVLLGTVMVMILWP 167 Query: 166 HWPQMMRLMAESPITAMGNAMDLVG-LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQ 224 ++ L+ +G M L L +V L + +G D FQ ++ +MS Q Sbjct: 168 ERLRLEALLHMDVAELLGVTMSLTTHLMGSVVALLALVAIG-DYLFQYRQWYERQKMSLQ 226 Query: 225 DIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMS 284 ++++EFKQSEGDPHVKGRIRQ+++ ++RMMA VPKA VI+ NPTHYSVAL Y E M Sbjct: 227 EMKEEFKQSEGDPHVKGRIRQIRQQRMKKRMMAAVPKASVIITNPTHYSVALSY-ERGMQ 285 Query: 285 APKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLA 344 AP VAKG +A +IREI +++P +E PLARALY EI ++IP + Y AVAE++ Sbjct: 286 APVCVAKGVDNIAFKIREIAKAHDIPIVENVPLARALYATVEIDEEIPVEHYHAVAEIIG 345 Query: 345 WVWQLKR 351 +V L+R Sbjct: 346 YVMGLRR 352 >UniRef50_C5EFG7 Flagellar export protein n=3 Tax=Clostridiales RepID=C5EFG7_9FIRM Length = 353 Score = 218 bits (554), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 132/360 (36%), Positives = 207/360 (57%), Gaps = 19/360 (5%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLAR--RLSGMLSA 62 +D+KTE TP R + R++G + +S ++ ++ +LV + + R R + + Sbjct: 3 ADEKTEKATPKRRQDERKKGNVFQSNDVAAVCSMLVLFHSLKALAPHMYRNFRDAMYMFM 62 Query: 63 GLHFDHSIINDP---NLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 G+ D + +++ ++L + A LPL+ VL A+ + FS Sbjct: 63 GMAADSDSFHQEAGREMLVKAMLLFLESA----LPLLFIGVLTAVAVTFFQTRMAFSMDV 118 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM---AE 176 L+ K +++PL G KRMFS ++ EL+KA++K ++G V FL ++ RLM E Sbjct: 119 LKFKMERISPLKGFKRMFSIRSVVELIKALIKITILGWVVYVFLKGRMEELSRLMEGTVE 178 Query: 177 SPITAMGNAMDLVGLCALLVVLGV--IPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 + GN + +L+ +GV I + D +Q + + K LRMS+Q+I++E+KQ+E Sbjct: 179 GALIFTGNT-----VISLVDTVGVAFIFLASMDYLYQWWEYEKNLRMSKQEIKEEYKQTE 233 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDP +KG+IR+ QR A RMM +VPKADVIV NPTHY+VAL YD ++ AP V+AKGA Sbjct: 234 GDPQIKGKIREKQRQMASMRMMQNVPKADVIVRNPTHYAVALGYDADRNRAPVVLAKGAD 293 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 +AL+I E+G N V LE PLAR LY E+ +IP + Y VA++LA+V++L +L Sbjct: 294 HLALKIVEVGEANGVYILEDRPLARGLYASVEVDMEIPEEYYQTVAKILAFVYKLNDKKL 353 >UniRef50_D2S977 Type III secretion exporter n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S977_9ACTO Length = 377 Score = 216 bits (551), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 140/362 (38%), Positives = 208/362 (57%), Gaps = 18/362 (4%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PTP RL+KAR+EGQIPR++EL + VG + F L R + A Sbjct: 9 EKTEDPTPQRLKKARKEGQIPRTQELGTW----VGAAAASFLLPMLVRNAFDQVGAMFVQ 64 Query: 67 DHSIINDPNL-----ILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 +++ P + +LGQ + + LP+ +++V + + GG+ SGK ++ Sbjct: 65 VGAVVETPEVEAVTALLGQALDTF---VTVALPMAVALMVVGVAASAAQGGVTVSGKPMK 121 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 P KLNP PG+KRMF E KA++KT +G+V Q++ P++A Sbjct: 122 PTLKKLNPFPGMKRMFGGHGLWEATKAVIKTAALGTVV-VVTSDRAQQLVSSAGALPLSA 180 Query: 182 MGNAM--DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + V + ++ V G++ V V + + +K+LRM++ +I+ E K SEGDPHV Sbjct: 181 ITATFTDSAVLMIRVVAVTGLVIAVADYVIVRKRT-MKELRMTKYEIQQEHKNSEGDPHV 239 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K + R Q A +R RMMA+V ADV++ NPTH +VAL+Y+ ++ AP+VVAKGA VA + Sbjct: 240 KAQRRATQMAMSRNRMMAEVADADVLLVNPTHVAVALKYEPDR-GAPRVVAKGADEVAAK 298 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG-Q 358 +RE AE VP ++ PLARAL+ EIGQ++P QL+ AVA VLA+V QL + GG Sbjct: 299 LRERAAEARVPLVQDVPLARALHASCEIGQEVPAQLFTAVARVLAFVMQLSARGVRGGFH 358 Query: 359 RP 360 RP Sbjct: 359 RP 360 >UniRef50_C6WJP3 Type III secretion exporter n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJP3_ACTMD Length = 363 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 138/367 (37%), Positives = 212/367 (57%), Gaps = 13/367 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS ++ D TE PT ++ A+ EG++ R+ +L + L +L + SL G+L Sbjct: 1 MSGKNKDATEEPTAKKVRDAKREGRMARTPDLGTWLGILGATWTLPMTLTSLLDIGQGLL 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 F + +P L + + + + LA+LPL +++ L++ + G L S K Sbjct: 61 KKAAGFMAA--PEPALAVAIVKDGVLDGALAVLPLSLTIIVATLVAAGLQGTLRMSTKQF 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVG-----SVTGFFLWHHWPQMMRLMA 175 +PKF++LNPL GIK MF + E LK ++KT L+ SV+G + L A Sbjct: 119 KPKFTQLNPLKGIKNMFGPHSLWEALKTLIKTSLLAGLLYVSVSGLVPSVVASGTLSLAA 178 Query: 176 ESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 + + A G AM L+ L A+ G + M D K+L+M++Q+++DE KQSEG Sbjct: 179 LTDV-ATGTAMSLLRLAAI----GGLVMAVVDYAVAKRRIHKELKMTKQEVKDEHKQSEG 233 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DP +KG IR Q +R RMMA+VP ADV++ NPTH +VAL+YD + AP+VVAKGAG Sbjct: 234 DPQLKGAIRSKQMQMSRNRMMAEVPNADVVLVNPTHIAVALRYDPAR-GAPRVVAKGAGA 292 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 +A +IRE+ E+ VP ++ PLARAL++ E+G +IP +++ VA+VLA++ +LKR A Sbjct: 293 IATKIRELATEHRVPIVQDVPLARALHKACEVGHEIPFEMFGPVAQVLAFLHRLKRKGSA 352 Query: 356 GGQRPVQ 362 G +Q Sbjct: 353 AGTHRMQ 359 >UniRef50_B8J3L1 Flagellar biosynthetic protein FlhB n=5 Tax=Desulfovibrionaceae RepID=B8J3L1_DESDA Length = 359 Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 122/352 (34%), Positives = 210/352 (59%), Gaps = 15/352 (4%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVI--WFGGVSLA--RRLSGMLSA 62 KTE TP R+ K R EG +P+S+EL + LL G+S++ W G +S A + LS Sbjct: 9 SKTEEATPKRIRKQRGEGNVPKSQELGKAVSLLGGMSILYAWIGPMSEAIKKLFRHFLSH 68 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 FD +P + + L+ E ++P++ + ++++++ + G +++ K +P Sbjct: 69 AWEFD----PNPENVYSLTLELMIEVCKIIMPILLTLAVLSMLAQRLQVGKLWTTKVFKP 124 Query: 123 KFSKLNPLPGIKRM-FSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 K + N GIK+M FS QT +K++L ++++ ++ + ++ + + + T Sbjct: 125 KLQRFNIFKGIKQMLFSPQTILRTIKSLLFSLILSTIPAWIIYKEYQNFLPMYYA---TT 181 Query: 182 MGNAMDLVGLCALLVVLGVIPMV---GFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 G A+ ++ + LV +IP++ FDV+ +S+ + ++M++ +++DE KQ++GDP Sbjct: 182 EGVAVYMLQMAFKLVSYALIPILIIAAFDVWQSRYSYKENMKMTKDEVKDEHKQADGDPV 241 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK + R+ A +RM+ DVPKADV++ NPTH +VAL+Y+ + AP V+AKGA +A Sbjct: 242 VKSQQRKKMMEAMSKRMLQDVPKADVVITNPTHIAVALRYNATEAPAPVVLAKGADHLAE 301 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +I++ E+NVP E PLARALY+ AE+G IP +LY AVA VLA +W+LK Sbjct: 302 KIKQAAREHNVPIRENVPLARALYKSAEVGDMIPEELYKAVATVLAAIWKLK 353 >UniRef50_C8W1H2 Flagellar biosynthetic protein FlhB n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1H2_DESAS Length = 354 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 125/360 (34%), Positives = 210/360 (58%), Gaps = 20/360 (5%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGV------SLAR 54 M+ +KTE TP +L +AR +GQ+ +S +L + +++L V+ F + S+ + Sbjct: 1 MAQGGQEKTEKATPRKLLQARRKGQVAKSSDLNAAVLMLA--VVLLFYSIKQQQLSSMYK 58 Query: 55 RLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLV 114 S L+ + S ++ L++ I I+ + P++ VV+VAL+ M GLV Sbjct: 59 YFSWYLANFTQYRESQVSLMQLMVSFSIYYIK----LMAPVLIVVVIVALLINFMQVGLV 114 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 FS +S++P+ + NP+ G KR+F+ ++ EL K I K +++G +T + + +++ + Sbjct: 115 FSSESIKPQLKRANPIEGFKRIFTVRSLVELAKNIFKLLVIGGITYNLISGRFNELLLIF 174 Query: 175 AESPI----TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEF 230 +P T G + ++G ++ M D +Q + K +RMS+QDI+DE+ Sbjct: 175 YATPAMIFQTVSGFILRILGWGGIVY----FAMALLDYLYQRYEFQKSMRMSKQDIKDEY 230 Query: 231 KQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVA 290 KQ+EGDP +K ++R+MQR + R+ ++P+A V+V NPTH++VAL+Y E P V A Sbjct: 231 KQTEGDPLLKSKLREMQRKMSLSRIREEMPRATVVVTNPTHFAVALRYSEGDADVPLVTA 290 Query: 291 KGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 KGA +ALR+RE+ E NVP +E LAR LY E+G +IP +LY +VAE+LA V++ K Sbjct: 291 KGADYLALRMREMAKEYNVPVIEQRELARLLYDRVEVGTEIPYELYQSVAEILAMVYKKK 350 >UniRef50_A8EW41 Flagellar biosynthetic protein FlhB n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EW41_ARCB4 Length = 349 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 125/356 (35%), Positives = 207/356 (58%), Gaps = 10/356 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVG-VSVIWFGGVSLARRLSGM 59 M+D+ ++KTE PT +LE A+ EG + +S E+ IL G + +++F G S+ + + Sbjct: 1 MADD-EEKTEEPTSKKLEDAKNEGNVSKSMEVVGASILTFGSIFLLFFSGSSMLE-IKKL 58 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + +F ++ P L ++ + AL PL V+L+ L+ G + S Sbjct: 59 MMLSYNFIGQEMDGP-LYYAITYTVVITLLKALAPLFILVILLGLVGNWAQFGFI----S 113 Query: 120 LQPKFS--KLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 + KF KL+P+ G+K +F + E LK LK ++ +V + + + +M + Sbjct: 114 IPLKFDLQKLDPIKGLKNIFGLKKLLEALKLSLKLAIIITVMFIIFSLTYNEFLAMMNKE 173 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + + + + L ++ +I D +F + ++K L+MS+Q+I+DE+K EGDP Sbjct: 174 TMATISSMLQLTIYFIFTILFIIIIFAIMDFYFSKYYYMKSLKMSKQEIKDEYKNMEGDP 233 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 VKGRIR++Q A++RMM +VP ADV++ NPTHY+VAL+YD SAP +VAKG +A Sbjct: 234 QVKGRIRRIQMQMAQKRMMGNVPNADVVITNPTHYAVALKYDNKVNSAPVLVAKGIDFLA 293 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 L+I++I ENNV +E P LARALY E+ ++IP Q Y A+AE+ +++++LKR R Sbjct: 294 LKIKDIAKENNVTIIENPALARALYDQIEVDKEIPNQFYKAIAEIFSYLYELKRKR 349 >UniRef50_B0THC3 Flagellar biosynthetic protein flhb, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THC3_HELMI Length = 362 Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 128/354 (36%), Positives = 218/354 (61%), Gaps = 14/354 (3%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT R +AR++GQ+ +S+E+ + LILL G + GV + + GM ++ Sbjct: 15 EKTEKPTAKRRSEARKKGQVAKSQEVNTALILLFGFLALRSLGV---QTMDGMERMMVYL 71 Query: 67 DHSI----INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 ++ + ++I + IR ML + P + + L++ + G +FS + L+ Sbjct: 72 LGTVTLEEVTPVSVITTGTTIAIR-TMLMIAPFMLAAMAAGLLASYLQVGFLFSSEGLKM 130 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHH---WPQMMRLMAESPI 179 + KLN + G+K +FS+++ EL+K++LK ++ V + H +P+++ + ++ + Sbjct: 131 NWGKLNVIAGLKNIFSSRSLVELVKSLLKVSVISYVAYSAVVKHLHLFPKLLGMDVQTAV 190 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ VG +++L V + D +Q + H + L+MS+Q+++DEFKQ+EGDP + Sbjct: 191 AAISEVAYDVGFRVAVLLLLVAAL---DYGYQWYKHEESLKMSKQEVKDEFKQAEGDPQI 247 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +I+Q R A RRMM ++PKADV++ NPTH++VAL+Y+ M+AP V+AKG VAL+ Sbjct: 248 KSKIKQRMREMAMRRMMQELPKADVVITNPTHFAVALKYESGSMTAPVVIAKGQDYVALK 307 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 IR + ++ +P +E PLAR LYR EIGQ+IP +L+ AVAEV A+V++LK+ R Sbjct: 308 IRAVAQDHGIPLVEDKPLARTLYRAVEIGQEIPAELFQAVAEVFAFVYRLKKKR 361 >UniRef50_UPI00016C3B58 flagellar biosynthesis protein FlhB n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3B58 Length = 355 Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 137/358 (38%), Positives = 201/358 (56%), Gaps = 23/358 (6%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 + + KTE PTP R E+AR +GQ+P S EL L+L+ GV + + G L + + A Sbjct: 6 DQESKTEDPTPRRREEARRQGQVPFSAELVGSLVLVAGVLGLRYLGPDLWATMITVFRAD 65 Query: 64 L---HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L + + +LG+ L + AML L+ V + A ++ V G + + L Sbjct: 66 LPRVGREEFGTAEAAELLGRTALRMIGAMLPFFGLLLAVGVGASVAQV---GFQLNTEKL 122 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWP-----QMMRLMA 175 +P KLNP+ G+ R+FS + L + K + + V + L M R+ Sbjct: 123 EPNLDKLNPVGGLGRLFSLGSVVRGLLTVAKVLALAGVAYYVLNGRGGLIASIGMGRIGE 182 Query: 176 ESPIT---AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQ 232 +P+ M A+ L G AL+ V FD +Q + + L M++++++ E KQ Sbjct: 183 AAPVAWALVMRLALYLAGAVALVAV--------FDYAYQRYKFEQSLMMTKEELKQELKQ 234 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 EGDPHVK R+RQ+ R +R+M+++VPKA V+V NPTHY+VAL+YD N+ SAP VVAKG Sbjct: 235 EEGDPHVKARVRQIARERTKRKMLSEVPKATVVVTNPTHYAVALRYDSNRDSAPVVVAKG 294 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 G ALRI + E+ VP LE PPLARAL+ E GQQIP L+ AVAEVLA+V +++ Sbjct: 295 KGAFALRIAKRARESGVPVLERPPLARALHSVRE-GQQIPSALFRAVAEVLAFVMKMR 351 >UniRef50_Q1Q6S5 Similar to flagellar biosynthetic protein FlhB n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6S5_9BACT Length = 349 Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 129/357 (36%), Positives = 221/357 (61%), Gaps = 14/357 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIW-FGGVSLARRLSGM 59 M+D +KTE PT R+ + R++G + +S +L+S + +LVG +++ G + A Sbjct: 1 MADT--EKTEQPTGKRISEVRQKGSVAQSPDLSSAIAILVGFLLLYALGNIMYAGMKEIT 58 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + + I P++I+ +II I + LLP++ G+++V LI M GL+F+ K Sbjct: 59 VFTLQNLSQKDIT-PDIIVEKIIYYIYVSAKILLPILGGLLIVGLIVSYMQTGLLFTLKP 117 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM----A 175 L+P +KLN + G+K++F+ Q+ +LL +++K +L+G + ++ ++ L+ A Sbjct: 118 LKPDLTKLNVISGVKKLFNVQSFVKLLFSVVKLLLIGGIGILYIKKELAKLDNLIDIGIA 177 Query: 176 ESPITAMGNAMDLVGLCAL-LVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 + I LV ++ LV+L ++ D +Q + + + ++MS+++++DE KQ+E Sbjct: 178 QFFILTTKLTFGLVMRVSIALVILAMV-----DYIYQKWQYKRGMKMSKKEVKDERKQAE 232 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDP +K +IR Q A +RM + +PKADV+V NPTHY+VAL+YD M APKVVAKGA Sbjct: 233 GDPVIKSKIRSAQIQMALKRMASAIPKADVVVTNPTHYAVALKYDRKSMHAPKVVAKGAD 292 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +AL+I+EI N +P +E LAR LY+ ++G++IP +LY AVA+VL++V+ LK+ Sbjct: 293 YIALKIKEIAKINKIPIVEERSLARTLYKTVDVGKEIPQKLYYAVAKVLSYVYGLKK 349 >UniRef50_C6HWM0 Flagellar biosynthetic protein FlhB n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWM0_9BACT Length = 365 Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 137/369 (37%), Positives = 210/369 (56%), Gaps = 14/369 (3%) Query: 1 MSDESDD---KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M+D +D + E PT RLEKAREEGQ+ RSRE+ L + ++ G L L Sbjct: 1 MADNENDGQLRQEEPTSRRLEKAREEGQVARSREVGYFFFLAASLILMASYGSRLVEGLR 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 +S L I P+ I + L+ M PL+ G ++ + + ++ GG++ S Sbjct: 61 DDMSYYLRHSGEISLTPDGITPFVKGLVLHEMGRTFPLLGGFLVFGVAAYIVQGGILVSP 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHW---PQMMRLM 174 K+ K+++++P GIKR+FS + ELL+ +K ++ + + L W P +M Sbjct: 121 KAAAIKWNRVSPSQGIKRLFSWRALEELLRYTIKVVVSLLILFYALKQDWMTLPALMETG 180 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 A + A+ + V L + L + + +G D FQ F ++ LRM+R +I++E K++E Sbjct: 181 AHRMVGALYH-FTFVVLVSFLPLYAALA-IG-DYLFQRFMMMRGLRMTRTEIKEETKETE 237 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDPHV+ RIR +QRA ARRRMM+ + A V++ NPTH++V L+Y M+AP VVAKGA Sbjct: 238 GDPHVRARIRSIQRAMARRRMMSKIKDATVVITNPTHFAVVLKYHPESMAAPVVVAKGAD 297 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 VA RIREI E VP +E PP AR L+R + ++IP Y AVA +L+ ++Q Sbjct: 298 EVAFRIREIAREVGVPVVEDPPTARGLFRECPLDREIPFTFYEAVARILSILYQ-----R 352 Query: 355 AGGQRPVQP 363 +GGQ P++P Sbjct: 353 SGGQVPLRP 361 >UniRef50_C4ZAM8 Flagellar biosynthesis/type III secretory pathway protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZAM8_EUBR3 Length = 382 Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 126/358 (35%), Positives = 213/358 (59%), Gaps = 20/358 (5%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTS-----LLILLVGVSVIWFGG--VSLARRL 56 E +KTE T +L+ AREEG++ +S+ELT+ +L L++ + + + GG + L + Sbjct: 29 EGGEKTEPATEKKLKDAREEGKVAKSKELTAAFDLIVLFLVLKIFISFVGGNLIGLFSTV 88 Query: 57 SGMLSAGLHFDHSIINDPNLI--LGQIILLIREAMLALLPLIS-GVVLVALISPVMLGGL 113 + L I+ ++ L +IL + +L +LP + GVV+ L+S + +G Sbjct: 89 YKKMPDFLKESQEQISSVSVTHYLNNVIL---QFLLTVLPFFAFGVVITILVSIIQVGFK 145 Query: 114 VFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL 173 + S K + PK SK NP+ G KR+ S + ELLK++LK ++ V + H + L Sbjct: 146 I-STKPMAPKLSKFNPINGFKRILSKDSIFELLKSVLKVGIIMYVAYSSVKSHQNDIFIL 204 Query: 174 MA---ESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEF 230 + I +G+ + GL + +V ++ + F F++ ++M++Q+++DEF Sbjct: 205 YELPLKQAIVLIGDIIINTGL-KISIVYMIVGIADFAYNKHKFNN--DMKMTKQEVKDEF 261 Query: 231 KQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVA 290 K +EGDP +KG+ R+ + A++RRMM DVPKADV++ NPTH++VA++YD K AP VVA Sbjct: 262 KNTEGDPAIKGQQRKRMQEASQRRMMQDVPKADVVITNPTHFAVAVKYDAQKNDAPVVVA 321 Query: 291 KGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 KG VA +I+EI +NN+ +E PLAR L+ + ++G +IP +LY +VAE+LA +++ Sbjct: 322 KGQDYVAQKIKEIARDNNIHIVENKPLARMLFHNVDLGAEIPPELYRSVAEILAMIYK 379 >UniRef50_A4J750 Flagellar biosynthetic protein FlhB n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J750_DESRM Length = 354 Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 126/355 (35%), Positives = 209/355 (58%), Gaps = 11/355 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELT-SLLILLVGVSVIWFGGVSLARRLSGM 59 M + S +KTE TP RL++AR +GQ+P+S +L ++L+L+ G+ + + + + Sbjct: 1 MPEGSQEKTEQATPRRLQEARRKGQVPKSADLNGAILLLITGLFALLYKDNLITHMQTYF 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + +F D L+ I +I + PL +++VAL + G +F+ ++ Sbjct: 61 FTYFNNFVKQQQQDSYLVQILIDFMI-NVFVVFTPLFILLMVVALGVNLAQVGFLFAPEA 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++PK KLNP+ G+K MFS + EL+K++LK +VG V + ++ + P Sbjct: 120 IKPKLDKLNPINGLKNMFSGRAMFELVKSLLKITIVGWVVYAAVRGEMANLLAIFHSPPR 179 Query: 180 TAMGNAMDLVGLCALLVVL-GVIPMVG---FDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 T + + + AL V+L G + +G D+ +Q ++ K++RMS+Q++++E+KQ+EG Sbjct: 180 TLLNQVLTI----ALKVILWGAVVYLGIALLDLLYQRYAFQKQMRMSKQEVKEEYKQTEG 235 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DP +KG +R+ QR +VP+A V+V NPTHY+VAL+Y E M AP VVAKG Sbjct: 236 DPQIKGWLRRRQRQLLANLARKEVPQATVVVTNPTHYAVALKY-EQPMDAPVVVAKGTDH 294 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +A +IREI +N VP +E +AR LY + EIG IP +++ AVAE+LA V+++K Sbjct: 295 MARQIREIARKNEVPVIENVEVARFLYANVEIGHAIPMEMFQAVAEILAMVYRMK 349 >UniRef50_D0XSL6 Flagellar biosynthetic protein FlhB n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XSL6_9CAUL Length = 362 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 130/367 (35%), Positives = 214/367 (58%), Gaps = 15/367 (4%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++++D KTE +P +LE+AR++G + +S ++ L LL V+ GG A ++ Sbjct: 1 MAEDADPESKTEEASPQKLEEARKKGDVAKSADVAPALSLLCVTGVLIMGGGYFATNMAQ 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALIS----PVMLGGLV 114 + H+++ L G + + + + P + V+L A++ V GLV Sbjct: 61 GFLPFIAAPHAMLG--GLEAGGGVEIGARVLWVVAPFLGAVMLAAILGGVGGNVAQSGLV 118 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 S + ++PK+SK++P+ G KR+F + + +LK + VG + L H Q + Sbjct: 119 ISAEKMKPKWSKVSPMAGFKRIFGPDGLMQFAQTLLKLVAVGVICWMVLKPHARQFETMA 178 Query: 175 AESPITAMGNAMDLVG--LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQ 232 A SP+T + A DL+ + + LV L + G D +Q K++RMS++++++E+KQ Sbjct: 179 AMSPLTILPLARDLMIALMSSALVFLALT--AGGDFVWQKMRFAKRMRMSKEELKEEYKQ 236 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 SEGDPH+K +++Q++ +R+RMM +VPKA VIV NPTHYSVAL+Y+ +AP VAKG Sbjct: 237 SEGDPHIKAKLKQIRMQRSRQRMMQNVPKATVIVTNPTHYSVALRYEAGD-AAPVCVAKG 295 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR- 351 VA+RIRE+ E++VP +E PLARALY +I + IP + + A A V+ +V + ++ Sbjct: 296 VDAVAMRIREVAREHDVPIVENVPLARALYAAVDIDETIPREHFEAAARVIGFVMKKRQP 355 Query: 352 -WRLAGG 357 R AGG Sbjct: 356 GMRRAGG 362 >UniRef50_C1ZJL2 Flagellar biosynthetic protein FlhB n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJL2_PLALI Length = 360 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 126/349 (36%), Positives = 205/349 (58%), Gaps = 4/349 (1%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 DES DKTE PT R +ARE+G + +S++LT+ ++L V+W+ G ++A ++ ++ Sbjct: 4 DESGDKTEDPTERRRSEAREQGNVVKSQDLTAAALMLGSAGVLWWHGRNVAEYMARLMRN 63 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 L D N ++ + E+ + PL+ + L A+ ++ G +FS + LQP Sbjct: 64 SLSAAPWTTFDQNDLVSLAWAHLGESGWQVAPLLILLALAAIAINLLQVGFLFSPEVLQP 123 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT-- 180 K+ ++NPL GI+R+FS + A L + K L+GSV +F++ + L A P+T Sbjct: 124 KWERINPLSGIQRLFSITSVARLGANLAKLALLGSVATWFVYDGLHRFAAL-AHQPLTVV 182 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ +L+ L + L + D FQ + + + L+MS+Q+IRDE+K+ +GDP ++ Sbjct: 183 AVVAGSELISLI-FWMALAIFVAALADFAFQWWKYEQDLKMSKQEIRDEYKEMDGDPLIR 241 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R R+ R + R + V ADV++ NPT ++A++YD M AP VVAKGAG +A +I Sbjct: 242 MRRREAHRKLTQGRELQSVKTADVVITNPTEIAIAIKYDVATMPAPIVVAKGAGELAAQI 301 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 R + AEN VP +E P+ARALY+ +G IP LYA AE+LA+V+++ Sbjct: 302 RRLAAENGVPIIERKPVARALYKLTRVGDPIPSDLYAVFAEILAYVYKI 350 >UniRef50_A8F4V6 Flagellar biosynthetic protein FlhB n=1 Tax=Thermotoga lettingae TMO RepID=A8F4V6_THELT Length = 376 Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 122/347 (35%), Positives = 200/347 (57%), Gaps = 8/347 (2%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG--L 64 +KTE PTP R KAREEGQ+ S EL + LV V V+ F + +RL L G L Sbjct: 35 EKTEKPTPRRRRKAREEGQVATSNELNMAVTFLVAVFVMRF----IFQRLIMFLENGSIL 90 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F + N + G+I ++ + L+ L +++ + + M + S K L+ Sbjct: 91 FFSLEENDFLNNLSGRIYQSFKDTIFLLVLLFLSLIISVIFAGAMQTKFLLSFKPLKMDL 150 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE-SPITAMG 183 ++NP+ G KR FS ++ ELLK+ILK ++VG V + +W + R ++ + ++ Sbjct: 151 KRINPVEGFKRFFSMRSLFELLKSILKMVIVGFVAYSVIRSNWI-LFRFYSDMETVDSLK 209 Query: 184 NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRI 243 +L L + + + D F+Q + K +RM++Q+I++E+++ EG P V+ R Sbjct: 210 LIFNLTYEVMLKCAIALFILAIVDYFYQRWEFEKSIRMTKQEIKEEYREIEGSPEVRRRQ 269 Query: 244 RQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREI 303 R++ AR RM+ VP+ADV++ NP+H +VA++Y +M AP V+AKGA +A +I +I Sbjct: 270 REIMARLARGRMLQQVPEADVVITNPSHIAVAIEYKSEEMEAPVVLAKGADEIAQKIIQI 329 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 ENN+P + P +AR LY+ +IG+QIP +Y AVAE+LA+V+ L+ Sbjct: 330 AKENNIPVVRNPQVARELYKTTDIGEQIPPNMYRAVAEILAYVYSLR 376 >UniRef50_B8FTQ2 Flagellar biosynthetic protein FlhB n=2 Tax=Desulfitobacterium hafniense RepID=B8FTQ2_DESHD Length = 350 Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 128/363 (35%), Positives = 213/363 (58%), Gaps = 26/363 (7%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML--SAG 63 +KT TP R ++AR++GQ+ +S E+ S L+L+ + ++ F ++ ++S + G Sbjct: 2 SEKTFQATPRRRQEARKKGQVFKSTEMVSALMLVSFIGLLKFYVPTMLEKVSQIFPYVYG 61 Query: 64 LHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 L + + + +L++ + L ++ + PL ++A + + +F+ + L+P+ Sbjct: 62 LSAEWTARSVASLMVDLLWLGVQ----IVAPLFVVGAVIATGANYLQVRSLFTLEPLKPQ 117 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHH-------WPQMMRLMAE 176 S+++ + G KRMF + EL+K++LK +G +FL+ +P M RL Sbjct: 118 LSRISMISGAKRMFGMKAWVELIKSLLKVTFIG----YFLYATIRDNFEIFPVMARL--- 170 Query: 177 SPITAMGNAMDLVGLCALL---VVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQS 233 T AM + GL L + L + D +Q + + K L+MS ++++ E+KQ+ Sbjct: 171 ---TVGQGAMFIGGLIVELGWKIALSFFVIAAIDFLYQWWDYEKNLKMSHEELKQEYKQT 227 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EG+P +KG I++ QRA + RRMM D+ ADV+V NPTHY+VAL+YD + SAP VVAKGA Sbjct: 228 EGNPQLKGEIKRKQRAMSMRRMMQDLKTADVVVTNPTHYAVALRYDPKENSAPVVVAKGA 287 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +A RI+++ + + T+E PLARAL+ AEIGQ +P LY AVAEVLA+V++LKR + Sbjct: 288 DEIAQRIKQLAKDYGIITMENKPLARALFAQAEIGQAVPADLYKAVAEVLAFVYRLKRKK 347 Query: 354 LAG 356 G Sbjct: 348 FTG 350 >UniRef50_Q1D9K3 FlhB/HrpN/YscU/SpaS family protein n=3 Tax=Cystobacterineae RepID=Q1D9K3_MYXXD Length = 359 Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 132/362 (36%), Positives = 212/362 (58%), Gaps = 25/362 (6%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSDES +KTE P+ +L+ +R++GQ+ +S++L+ + +LLVG++ + L L+ + Sbjct: 1 MSDESGEKTEEPSQKKLDDSRKKGQVWKSKDLSGVGVLLVGLAAVKGSWDMLETELTSLF 60 Query: 61 SAGLHFDHSIIN--DPNLILGQIILL-IREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 FDH + N D ++ GQ++ L +R +L LP+++G +V + + G +F+ Sbjct: 61 L--FSFDH-LTNPVDLSVATGQLLFLGLRAVVLVSLPVLAGGAIVGGLMEYLQVGTLFTM 117 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 L PK KLNP+ G+K +F+ + ELLK ++K SVT + ++ M ++AE+ Sbjct: 118 DPLIPKMEKLNPIQGMKNLFNKKAIVELLKNLIKI----SVTAYVVYGVVRDSMPMVAET 173 Query: 178 PITAMGNAMDLVG---------LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRD 228 M ++G + L V+ GV FDV++Q S +K + M++++++ Sbjct: 174 LRQDTRGIMAIMGELVTRVATRVALLFVLFGV-----FDVWWQRKSFMKDMMMTKEEVKK 228 Query: 229 EFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKV 288 E+KQSEGDPH K + ++M + M V +ADVIV NP H +VAL+YD K AP+V Sbjct: 229 EYKQSEGDPHHKAKRKEMHQEIMEGAQMEAVREADVIVTNPDHVAVALKYDREKDGAPRV 288 Query: 289 VAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 +A+G A RI+ I E +VPTL PLA AL R E+G ++P +LY AVAEVL +V+ Sbjct: 289 LARGIDFKAERIKAIAREQDVPTLRNVPLAHALLR-VEVGHEVPEELYDAVAEVLNFVYG 347 Query: 349 LK 350 LK Sbjct: 348 LK 349 >UniRef50_Q97H65 FliR/FlhB fusion protein n=1 Tax=Clostridium acetobutylicum RepID=Q97H65_CLOAB Length = 610 Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 120/351 (34%), Positives = 200/351 (56%), Gaps = 10/351 (2%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLH 65 DKTE TP R +AR++GQ+ RS+E+ L+ +I GG + L M+ Sbjct: 262 SDKTEEATPKRKSEARKKGQVARSKEVPLAATLVAITFIISLGGQTFFNGLGVMMQTFFQ 321 Query: 66 -FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + HS + + +L II +I A + V++V +++ + G + + + ++P Sbjct: 322 SYIHSNLTELDL-RRIIIFVILNAGKFIFMFGVPVMVVGIVANIAQTGWITTTEPIKPDL 380 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHW---PQMMRLMAES-PIT 180 KLNP+ G KR+FS T LLK ++ ++ V FL ++ + LM + P Sbjct: 381 KKLNPISGFKRIFSMTTIVNLLKDLVVVAVLSVVGYKFLMSNYGDIANLNNLMVQYIPQA 440 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + + AL++++ + GFD + + + K ++M++ ++++EFKQ+EGDP +K Sbjct: 441 YLSYVISIFRIVALIMIV----IAGFDFVYNRYKYKKDMKMTKHEVKEEFKQAEGDPEIK 496 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G+ RQ R R M++ VP A V++ NPTH SVA++Y+ AP VVAKGA ALRI Sbjct: 497 GKRRQRMREIVTRTMLSKVPDATVVITNPTHISVAIKYERGVDKAPTVVAKGADRTALRI 556 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +EI ENNVP +E PLAR +++ E+ +QIP ++Y VAE+LA V++L + Sbjct: 557 KEIAKENNVPIMENKPLARLIFKKVEVDEQIPAEMYQTVAEILALVYKLNK 607 >UniRef50_Q67K27 Flagellar biosynthesis protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K27_SYMTH Length = 361 Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 130/358 (36%), Positives = 212/358 (59%), Gaps = 11/358 (3%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVG-VSVIWFGGVSLARRLSGMLSAGLH 65 ++TE PTP RL+KAREEG++ RS +L + L L+ +++ GG S+ + GM+ A Sbjct: 8 ERTEEPTPRRLQKAREEGRVARSTDLVAGLGLVAATLALRGLGGYSVQQVTGGMVGA--- 64 Query: 66 FDH----SIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 F+ + + + Q LI + A+LP+ VV + +++ + +F+ ++L Sbjct: 65 FETLRPLELTPETTAAVMQDWALI--GLRAVLPIALVVVAIGVVAGTLQTRFIFTLRALV 122 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 P+F+ LNP+ G+ R+FS +T EL+K ++K +G + + PQ L+A++ Sbjct: 123 PRFATLNPITGLTRIFSLRTVTELVKGLIKLAAIGYIAYRSVRGLVPQFPNLIAQTVPAG 182 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + D+V L V L + + D +Q + + +RM++Q+++ E ++ EG P +K Sbjct: 183 LSAIADMVLDVMLAVGLAYLVVGVLDYGYQYWEFRRSMRMTKQEVKQEHREQEGAPELKS 242 Query: 242 RIRQ-MQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R RQ M+ A RRR + +VP ADV+V NPTH++VAL+Y+ K AP+VVAKGA L+AL I Sbjct: 243 RQRQRMRELAMRRRALKEVPGADVVVTNPTHFAVALKYEAAKDEAPRVVAKGADLLALEI 302 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 ++I ++VP +E LAR LY E+G+ IP + Y AVAEVLA+V+ L+R GQ Sbjct: 303 QKIARAHDVPLVENRTLARGLYYDVEVGRLIPPEYYQAVAEVLAFVYNLRRQSRQAGQ 360 >UniRef50_Q2RKD2 Flagellar biosynthetic protein FlhB n=5 Tax=Bacteria RepID=Q2RKD2_MOOTA Length = 374 Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 134/352 (38%), Positives = 216/352 (61%), Gaps = 13/352 (3%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +++KTE TPHRL++ R++GQ+ RS +L++ ++LL V +++ + + ++ ++++ L Sbjct: 27 AEEKTEEATPHRLQEVRQKGQVARSNDLSTAMVLLACVVFLYWRRETFYQAMADLITSTL 86 Query: 65 HFD-HSIINDPNLI-LGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 H ++ +L+ LG + L + L L PL++ V L + G VFS + L P Sbjct: 87 QDGWHQQLDGGSLMALGSQLAL--KVGLLLAPLLALAAAVGLAANFAQTGFVFSLEPLLP 144 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 + L+P+ G++R FS + ELLK++ K ++V V + + Q++ L + + A Sbjct: 145 RLENLDPVKGMQRFFSRRALMELLKSLAKVVVVSLVVWQLVKGQFTQLL-LTVDMGLPA- 202 Query: 183 GNAMDLVGLCALLVVLGVIPMVGF----DVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 +DLV V LG + + D FQ + K LRM+RQ++++E KQ EGDP Sbjct: 203 --TLDLVSRMVYRVGLGTVAVFLALAAADYVFQRREYQKNLRMTRQEVKEEMKQMEGDPL 260 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 V+ R+R+ QR AR RMM VP+A V++ NPTH +VAL+Y E + AP+VVAKGAG +A Sbjct: 261 VRSRLREKQRQLARHRMMHAVPEATVVITNPTHVAVALRYREEE-RAPRVVAKGAGSIAE 319 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 RI+ + +NVP +E PP+ARALYR E+GQ+IP LY AVAE+LA +++L+ Sbjct: 320 RIKAVARRHNVPVVENPPVARALYRQVELGQEIPVALYQAVAEILARIYKLR 371 >UniRef50_C1F996 Flagellar biosynthetic protein FlhB n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F996_ACIC5 Length = 409 Score = 207 bits (526), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 131/358 (36%), Positives = 208/358 (58%), Gaps = 29/358 (8%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S ++TE +P R ++ARE+G IP SR+LTS +L G V+ + G R +G S L Sbjct: 2 SGERTEKASPRRKQEAREKGDIPHSRDLTSAAAMLAGTLVLGWAGPMWEARWAGSYSEML 61 Query: 65 HFDHSIINDPNLIL-GQII---LLIREAMLALL-PLISGVVLVALISPVMLGGLV----- 114 ++ P L GQ++ L IR AM+ +L PL+ V+ +A + +L G+ Sbjct: 62 D-----LSQPRSWLDGQMVEKMLAIRAAMMTVLWPLV--VMFLACFAAAVLAGVAQGRGV 114 Query: 115 -FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL 173 F+G+++ PK +LNPL +++ FS++ +LK+ L V ++ F +R Sbjct: 115 QFAGEAIAPKIERLNPLTVLQQTFSSRGLTRMLKSALP---VAALACFV-----AGKVRE 166 Query: 174 MAESPITAMGNAMDL-VGLCALLVVLGVIPMV--GFDVFFQIFSHLKKLRMSRQDIRDEF 230 P+ ++ L + +L+V + V D + +S ++LRMS+Q++R+EF Sbjct: 167 QTAIPVFSLTRLPSLFTSMYSLMVAAAAVLFVWSAIDYAVEWWSWEQRLRMSKQEVREEF 226 Query: 231 KQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVA 290 KQ+EG+P V+ RI ++R R+ + ADV +A V++ NPTHY+VALQ+ M AP+V+A Sbjct: 227 KQTEGNPEVRRRIASIRRQLRRKALRADVSRASVVITNPTHYAVALQFSLELMEAPRVLA 286 Query: 291 KGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 KG L+A +I++ VP +E PPLARALYR E+GQ IP LYAAVA +LAW+++ Sbjct: 287 KGRDLLAEQIKQEARWAGVPLVENPPLARALYRQVEVGQSIPFALYAAVAAILAWLYR 344 >UniRef50_B1I5J8 Flagellar biosynthetic protein FlhB n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I5J8_DESAP Length = 359 Score = 207 bits (526), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 127/359 (35%), Positives = 199/359 (55%), Gaps = 10/359 (2%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVG-----VSVIWFGGVSLARRLS 57 D KTE PTP RL++AR +GQ+ +S +LT + L V + WF + L R Sbjct: 6 DSGQLKTEQPTPRRLQEARRKGQVAKSLDLTGAVTLAALLLLFFVGLEWFI-IRLQRLFL 64 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 L + + N L+L + LL A+LP ++ V ++ G +F+ Sbjct: 65 VYLQNFTSYSLTAENVNYLVLQSLALLGG----AVLPAVAVAFFVTVLVSFAQVGFIFAP 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 L K +LNP+ G KR+FS++ E KAILK VG + + L+ ++ L S Sbjct: 121 SVLAVKLERLNPVQGFKRIFSSRGLFEFAKAILKICFVGILCFWVLYARVGDLLVLSVTS 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 P + +++ A + + D+ +Q ++H K L M+R ++RDE++Q+EGDP Sbjct: 181 PGQGLYLLHNVLLTVAAAAAGAYLLIAVLDLVYQRYAHHKSLMMTRFEVRDEYRQTEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 H+K +R+ QR + R+ +VP+A V+V NP H +VAL+Y E +M AP V AKGAG +A Sbjct: 241 HLKSWLRKRQREISMNRIKDEVPRATVVVTNPIHVAVALRYREGEMDAPLVTAKGAGYLA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 RI+E+ A++ VP +E LA+ LYR +G+ +P +Y AVAE+LA +++LK R AG Sbjct: 301 ERIKELAAQHKVPVVENRELAQYLYRRVPVGESVPVAVYQAVAEILAMIYRLKAKREAG 359 >UniRef50_B2TLW3 Flagellar biosynthetic protein FliR/FlhB n=6 Tax=Clostridium RepID=B2TLW3_CLOBB Length = 613 Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 122/354 (34%), Positives = 210/354 (59%), Gaps = 13/354 (3%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELT---SLLILLVGVSVIWFGGVSLARRLSGMLS 61 +D+KTE TP + ++++GQ+ RS++++ ++ + VS++W G SL G+L+ Sbjct: 264 ADEKTEEATPKKKSDSKKKGQMARSKDVSVAITMAACTLAVSMLW--G-SLVDTFKGVLT 320 Query: 62 AGLHFDHSIINDPNLI--LGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L F + D N + + I + + LP +++ + S ++ G + +G+ Sbjct: 321 YFLVFPS--LKDFNELTAMSLISFSLLKVATVFLPFALAIMIAGVASSIIQTGFLITGEP 378 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+P K+NPL G+K MFS ++ L+K ++ ++ + ++ +++ ++ + + + Sbjct: 379 LKPSLGKINPLKGLKNMFSKRSLVGLIKNVVVVTIISILAYKYVKNNYVDIINI-SNLYL 437 Query: 180 TAMGNAM-DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 ++G+ + +LV + L ++ + D F Q H K+L+M++Q+I+DE+KQ+EGDP Sbjct: 438 PSLGDEIKNLVIGIFKQITLALVIIGATDYFVQFRLHNKELKMTKQEIKDEYKQAEGDPQ 497 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDE-NKMSAPKVVAKGAGLVA 297 +K +I+Q QR RRMM V A V++ NPTH ++AL+Y+E M APKVVAKGA VA Sbjct: 498 LKAKIKQKQREMGMRRMMQSVSDATVVITNPTHLAIALKYEEGGNMEAPKVVAKGADNVA 557 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 LR++ I +N+VP +E PLAR +Y EI Q IP LY VAEVLA V +LK+ Sbjct: 558 LRLKTIAKDNDVPIVENKPLARLMYDRVEIDQDIPQDLYQGVAEVLAIVLKLKK 611 >UniRef50_A7HLM7 Flagellar biosynthetic protein FlhB n=3 Tax=Thermotogaceae RepID=A7HLM7_FERNB Length = 384 Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 133/357 (37%), Positives = 205/357 (57%), Gaps = 16/357 (4%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 DKTE TP + +KAREEGQ+P SREL S L L V + L +RL L Sbjct: 36 DKTEKATPRKRQKAREEGQVPISRELVSGLGFLFASMVF----ILLGKRLIDALITSTQS 91 Query: 67 DHSIINDPNLILGQIILL----IREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 I ++ L I+ R A L + L+ G L +LI ++ +F+ K L+ Sbjct: 92 VFEISDNDIRTLEDFIIYASQTFRPAFLVVAILVLGTALFSLIIGLLQTRFLFTFKPLKM 151 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 ++LNP+ G+KRMFS ++ ELLKAILK ++G V + ++ +++ + S I Sbjct: 152 DLNRLNPITGLKRMFSLRSLFELLKAILKLAIIGFVGYSVIKGNFDKVLLTVDSSLIDGT 211 Query: 183 ----GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 G +L+ C + +++ I D ++ + + + ++M++Q+I++EFK+ EG+P Sbjct: 212 LIMWGVLSELIIKCGIALIVVSIA----DYYYSRYEYEQNIKMTKQEIKEEFKEIEGNPE 267 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K R RQ+ A RMM +VPKA V++ NPTH++ AL+YD + APK+VAKG VAL Sbjct: 268 IKRRQRQIMMQFAMHRMMQEVPKASVVITNPTHFACALKYDPEEDFAPKLVAKGVDKVAL 327 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 RI +I +N+VP + P LAR +Y E+G IP +LY AVAEVLA+V+ L+ R+ Sbjct: 328 RIIDIARKNDVPIVRNPRLAREIYYSTELGDIIPEKLYKAVAEVLAYVYTLREGRIT 384 >UniRef50_C8WYW8 Flagellar biosynthetic protein FlhB n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WYW8_DESRD Length = 354 Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 130/357 (36%), Positives = 217/357 (60%), Gaps = 23/357 (6%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGV-----SLARRLSGM 59 +++TE PT R + REEG++ +S+E+ + L+L ++WF L R L+G Sbjct: 6 DEERTEEPTEKRRREFREEGKVAQSKEVNTALLLST-ALLLWFWYAPNFVEGLERFLAGF 64 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 +++ + P ++G + + L L P++ ++V +S + G +FS K+ Sbjct: 65 WDQAGYWNVT----PQAVVGWLGKGLIHLGLLLSPILILSIVVGFLSSYIQFGWLFSPKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 LQP KL+P+ G + S ++ ELLK++ K +VGSV + L H+ Q ++L+ + PI Sbjct: 121 LQPDIKKLDPIQGAAKFVSKRSAMELLKSLAKVAVVGSVAYWTLSDHFEQAIQLIGQ-PI 179 Query: 180 TAM------GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQS 233 + A L+ C L+ + VI D + + ++++M++++++DE K++ Sbjct: 180 ERIFVFIGWTAAEILLKCCIALLFIAVI-----DFAYTKWEMEEQMKMTKKELQDEHKET 234 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EGDP +K R+R +QR AR+RMMA+VP+ADV++ NPTHY+VAL+YD + M AP+V AKG+ Sbjct: 235 EGDPQLKQRMRSIQRDMARKRMMAEVPQADVVITNPTHYAVALRYDRSSMEAPEVTAKGS 294 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +VA RIREI E+ VP +E PP+AR L+ E+G+ +P +Y AVAE+LA+V+ LK Sbjct: 295 NIVAQRIREIAEESGVPLVENPPVARVLH-GLELGETVPESMYKAVAEILAYVYSLK 350 >UniRef50_C8WWG5 Flagellar biosynthetic protein FlhB n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWG5_ALIAD Length = 361 Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 128/351 (36%), Positives = 195/351 (55%), Gaps = 14/351 (3%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVS-------VIWFGGVSLARRLSGM 59 ++TE TP R ++AR+EG++ RS ELTS + + +W +L +R G Sbjct: 13 ERTERATPRRRQEARKEGRVARSPELTSAVAFAAVLVALRILGPAVWGEWENLIQRDLG- 71 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 G + ++ ++ A +LP+ + ++ L + VM +F + Sbjct: 72 ---GSALKSWTVEGVRALMATQVM---AAARIMLPIAAVAAVIGLAAAVMQVRPLFVPQL 125 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P F +++P G +R+ S Q E LK++LK V V L QM+ L A Sbjct: 126 LLPDFQRISPATGWRRIASLQGALEALKSLLKLAAVVGVAYTSLASLAHQMINLSAAELD 185 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 G V A+ V ++ + D +Q +S + LRMS+Q+++DE K++EG+P V Sbjct: 186 AVPGILGRAVFNLAIRVACAMVVIAAIDYVYQRYSLERSLRMSKQELKDELKETEGNPLV 245 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +R+ R A RRMM +V KADV++ NPTHY+VAL Y + M+AP+VVAKGA VA Sbjct: 246 KSAVRRRARQIASRRMMQNVAKADVVITNPTHYAVALAYQSDTMNAPQVVAKGADFVAQE 305 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 IR E++VP +E PPLA+ALYR +IGQ+IP LY AVAEVLA+V++++ Sbjct: 306 IRRRAEEHDVPLVENPPLAQALYRTVDIGQEIPPDLYQAVAEVLAYVYRMR 356 >UniRef50_B6IQA2 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodospirillum centenum SW RepID=B6IQA2_RHOCS Length = 373 Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 139/389 (35%), Positives = 226/389 (58%), Gaps = 35/389 (8%) Query: 1 MSDESDD--KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS+ +D KTE PT +L++AR +G +P SRE++S++++L GV I GG L + G Sbjct: 1 MSERPEDSQKTEEPTQRKLDEARRKGDVPVSREVSSMMLVLAGV--ILVGG--LGSWMGG 56 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVML-------- 110 L+ L ++ +P G L LL ++G + + L+ + Sbjct: 57 HLTDDLL---PLVENP----GDFPLQAPADAFRLLAWLAGEIGLVLLPAAAILLAAVLLA 109 Query: 111 ----GGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHH 166 G+VF+ + L+PK +++P+ G++R+ S +T E LK + K VG+ L Sbjct: 110 AVGQNGIVFTTERLKPKLERISPIAGLRRLVSLRTLVEFLKGLAKVAAVGAALLVVLE-- 167 Query: 167 WPQMMRL--MAESPITAMGNAMDLVGLCALLV--VLGVIPMVGFDVFFQIFSHLKKLRMS 222 P++ R+ +A + + A+ + V L LLV ++ I + D+ +Q FS ++ RM+ Sbjct: 168 -PELHRMEALALTDVAALPELLTSV-LTRLLVATLIASIAIALLDLVWQQFSWRRQQRMT 225 Query: 223 RQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENK 282 Q++++EF+Q+EGDPHVK RI Q++R AR+RM +D+P+A V++ NPTH++VAL+YD ++ Sbjct: 226 LQELKEEFRQAEGDPHVKARISQLRRERARQRMFSDIPRATVVITNPTHFAVALRYDLSE 285 Query: 283 MSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEV 342 AP +AKG LVA RIRE + VP +E PPLARAL++ EIG+++ + Y AVAEV Sbjct: 286 APAPVCLAKGMDLVARRIREAAMGHKVPIVENPPLARALHKSVEIGEEVQPEHYMAVAEV 345 Query: 343 LAWVWQLKRWRLAGGQRPVQPTHLPVPEA 371 +++V L+ + G P P VP A Sbjct: 346 ISYVVGLQAR--SQGAAPTPPGQPGVPPA 372 >UniRef50_B3EAW0 Flagellar biosynthetic protein FlhB n=8 Tax=Desulfuromonadales RepID=B3EAW0_GEOLS Length = 357 Score = 204 bits (520), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 121/361 (33%), Positives = 206/361 (57%), Gaps = 22/361 (6%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 D+ KTE PT RLEKARE+G P S+ L+ LL G+ V++ G L ++G+ S Sbjct: 4 DDDKHSKTEQPTGRRLEKAREKGAPPSSQMLSQSFTLLAGIVVLYLLGSYL---MNGLKS 60 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVML------GGLVF 115 + +S I L + ++ L L++ V+L + + ++ G L F Sbjct: 61 TTVQV-YSQIGTFELTEQNVYTMMLRIFGVLFMLLAPVILAVMSTGILAHIVQDNGRLDF 119 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 + SKLN + G ++F+ + E+LK+++K ++G + + + Q + ++A Sbjct: 120 QWGRITFDISKLNFISGFGKLFNKEALVEILKSLIKIFVIGWI-AYQVLRDELQNITVLA 178 Query: 176 ESPITAMGNAMDLVGL------CALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDE 229 ES + + + V C +++V+ ++ M + + +++ L+M++Q+++DE Sbjct: 179 ESDVNGILSYTGHVAFKIVTHTCGIMIVISILDMA-----YVKWRYIENLKMTKQEVKDE 233 Query: 230 FKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVV 289 K EG+P +KG+I+++Q AARRR+ +P ADV++ NPTH++VAL+YD ++M AP V+ Sbjct: 234 TKDMEGNPEIKGKIKRLQFQAARRRLTKIIPTADVVITNPTHFAVALKYDRSRMVAPMVI 293 Query: 290 AKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 AKGA +AL I+E+ E+ V +E LAR LY Q+IP LYAAVAEVLA+V++L Sbjct: 294 AKGADEMALAIKEMAREHKVTLVENRFLARELYDQVAENQEIPESLYAAVAEVLAYVYRL 353 Query: 350 K 350 K Sbjct: 354 K 354 >UniRef50_C5RFV5 Flagellar biosynthetic protein FlhB n=1 Tax=Clostridium cellulovorans 743B RepID=C5RFV5_CLOCL Length = 607 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 119/351 (33%), Positives = 204/351 (58%), Gaps = 9/351 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSREL---TSLLILLVGVSVIWFGGVSLARRLSGMLS 61 +D+K+E T +L A+++GQI RS++L + L G++ + G R+S ++ Sbjct: 261 ADEKSEEATSKKLADAKKKGQIARSKDLGLGITFLATAFGLAAL---GNMFIDRMSNIIM 317 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + + + LI I +I A+L +LP+ V++ + + + G + + + L+ Sbjct: 318 KFFSVTNGNLTEDGLIEILKIAMIDGAIL-ILPIAFIVMVTGVAASLAQTGFMNTSEPLK 376 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 P K+NP+ G KR+FS ++ +LLK + I+VG V G+ L + L+ A Sbjct: 377 PDLKKINPVDGFKRIFSMRSVVDLLKNVTIIIIVGYV-GYKLVSDDIVDIMLLINLKEGA 435 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGF-DVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + LL + ++ ++G D +Q LK++RM++Q++++E+KQ EGDP +K Sbjct: 436 ILYELKKIVTSILLKIALILSVIGIADYMYQKKKFLKEMRMTKQEVKEEYKQMEGDPEIK 495 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 + +Q + +R RMMA VP A V+V NPTH++VAL+Y+E AP VVAKG +A +I Sbjct: 496 AKRKQKMKELSRARMMAAVPNATVVVTNPTHFAVALKYEEGSAGAPMVVAKGTDNIAFKI 555 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +EI EN VP +E PLAR +Y+ +I ++IP +Y AVAE+LA V ++K+ Sbjct: 556 KEIAKENKVPIIENKPLARLIYKEVDIDEEIPIDMYQAVAEILAMVLKMKK 606 >UniRef50_A5V2R9 Type III secretion exporter n=2 Tax=Sphingomonadaceae RepID=A5V2R9_SPHWW Length = 379 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 149/385 (38%), Positives = 211/385 (54%), Gaps = 27/385 (7%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 E D+KTEAPTP R + A E+G + +SREL + L+++VG I G L MLS Sbjct: 6 EDDEKTEAPTPKRRQDAAEKGDVLQSRELGTALVMVVGAGWIAIAGPWAMAALKRMLSNA 65 Query: 64 LHFDHSIIN--DPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 L FD I DP L + ++ L LL L + + A+ +P MLG L F +L Sbjct: 66 LSFDAGAIENFDP---LSAALAMVATVALPLLLLFALTLAAAIAAPAMLGSLGFRWSALG 122 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 K +KLNP+ G+KR+F Q EL K++LK + +G+V +W M R+ A I Sbjct: 123 FKANKLNPMAGLKRIFGMQGLIELGKSLLKILALGAV------GYWLLMDRIAA---IVT 173 Query: 182 MG-----NAMDLVG----LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQ 232 MG A+D +G L++ L + + G DV Q+F K+LRMS+Q+I++E KQ Sbjct: 174 MGQQDLRTALDSLGSTFVFAVLVMTLALAVVAGADVPMQMFQRGKRLRMSKQEIKEESKQ 233 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 +EG P +K IRQ Q AAA V +A V++ NPTH++VAL+Y +AP V+A+G Sbjct: 234 TEGSPELKAAIRQKQMAAAMGSARKAVVEATVVLTNPTHFAVALRYRPGFDTAPVVLARG 293 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 G A IRE+ EN+VP L P L RA+Y + GQ I L+ AVA +LA+V+ L R Sbjct: 294 RGATAQAIRELATENSVPMLHYPQLTRAIYYTSRSGQVIREDLFIAVAAILAFVFNLDRA 353 Query: 353 RLAGGQRPVQPTHLPVPEALDFINE 377 G +P + VP+ F E Sbjct: 354 MAEGIAQP----EVDVPQGARFDEE 374 >UniRef50_A4XIZ4 Flagellar biosynthetic protein FlhB n=2 Tax=Clostridia RepID=A4XIZ4_CALS8 Length = 366 Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 118/354 (33%), Positives = 201/354 (56%), Gaps = 8/354 (2%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM---L 60 ++ KTE TP + ++AR+ G + +SRE+TS LL+ V + FG L Sbjct: 12 DTATKTEKATPRKRQEARKRGMVAKSREVTSAFALLISVLFLKFGYSLFVHPLQSYGKYF 71 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L+++ I D + + II + + +LP ++ + + G + + +SL Sbjct: 72 FGNLNYNIEDIADASRLFSAIITI---TLKLVLPFCIVIMFMTALVEWAQSGFLITSESL 128 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWP-QMMRLMAESPI 179 + F K+NP+ G KR+FS + EL+K+ILK +++G TG+ + +++ + S I Sbjct: 129 KVSFQKINPIEGFKRIFSINSVVELIKSILKILIIG-YTGYLSTKTFAGKLLEMYDMSLI 187 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + + + D L + + + D FQ + KKL M+++++++EFKQ+EG+P + Sbjct: 188 SIVKFSFDSTINLILWMSIMFFGIAVIDFIFQRQQYEKKLMMTKEEVKEEFKQTEGNPQI 247 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RIR+ QR + +RM +PKADV++ NPTHY+VAL Y+ K AP+V+AKG +A + Sbjct: 248 KSRIRERQRRISLQRMFQQLPKADVVITNPTHYAVALLYEPEKFDAPRVIAKGKDYIAQK 307 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 I+E + + +E LA++LY E+G IP +LY AVAEVLA+V+ LK ++ Sbjct: 308 IKEEAKKYKIEIVENKELAQSLYNMCEVGDFIPPELYHAVAEVLAYVYSLKNYQ 361 >UniRef50_A3V235 Flagellar protein FlhB n=2 Tax=Rhodobacterales RepID=A3V235_9RHOB Length = 383 Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 140/375 (37%), Positives = 206/375 (54%), Gaps = 41/375 (10%) Query: 1 MSDESDD---KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGV------- 50 M+DE+ D KTE PT RLEKA+E+GQ+ S+EL L L VG +++FG + Sbjct: 1 MADEASDGQEKTEEPTQKRLEKAKEDGQVASSKELFVLSTLSVGF-LLYFGLLPFLSGLL 59 Query: 51 ---SLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISP 107 S R SG AGLH D I N + ++++ LPL+ V++ L Sbjct: 60 LEWSALLRFSG--EAGLH-DEIIRNSST----SFAFIFWKSVIFALPLL---VIIVLTQM 109 Query: 108 VMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHW 167 M G + +S +L K S++NP+ G+KRMFS + E+LKA+ K V S+ G ++ Sbjct: 110 AMSGSINWSASALAFKGSRINPVNGLKRMFSVKALVEMLKAVGK---VASLIGAAIFVFS 166 Query: 168 PQMMRLMAESPITAMGNAMDLVG------LCALLVVLGVIPMVGFDVFFQIFSHLKKLRM 221 ++ +L+ S T + + +G + L+VL VI M FDV +Q + + KKL+M Sbjct: 167 SEVDKLLT-SQATHLFGGLSRLGDVFIFLMIVFLLVLAVIAM--FDVVYQQYDNNKKLKM 223 Query: 222 SRQDIRDEFKQSEGDPHVKGRIRQMQ-----RAAARRRMMADVPKADVIVNNPTHYSVAL 276 + Q+++DE KQ+EG P VK +IR++Q RA RR M VP A I+ NP H++VAL Sbjct: 224 TLQELKDESKQTEGSPEVKAKIRRLQMTAGSRAKQRREAMEQVPSATAIITNPIHFAVAL 283 Query: 277 QYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLY 336 +Y+ AP ++A G G A I +G E V LARAL+ IG +IP LY Sbjct: 284 KYEIGTRGAPTILAMGRGHQAQEIIRLGKEAGVTVFSNELLARALFFAGRIGDEIPPPLY 343 Query: 337 AAVAEVLAWVWQLKR 351 AVA VLA+++QL + Sbjct: 344 TAVAAVLAFIYQLNK 358 >UniRef50_C6NYG2 Flagellar biosynthesis protein FlhB n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYG2_9GAMM Length = 380 Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 129/355 (36%), Positives = 206/355 (58%), Gaps = 28/355 (7%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIW-----FGGVSLARRLSG 58 E+++KTE + RL+ A+++G++PRS++ T+ L+L +++W +G L+R + G Sbjct: 3 EAEEKTEKASQKRLDDAKKDGKVPRSQDWTASLVLFAATALLWAASGSWGTEILSRMVVG 62 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVML-GGLVFSG 117 + + LHF + IL + + + GV+LV+ I+ ++L GG V+S Sbjct: 63 LSVSSLHFRAD--------WQRTILQEAAPLFVVFLMFGGVILVSAIASILLVGGWVWSP 114 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHH---WPQMMRLM 174 L ++ +L+ G+KR F+ + + L + +KT L+G G +W W ++ + Sbjct: 115 GKLW-EWDRLSWTSGLKRPFTKKGFSVLWEDSVKTGLLGVCMGLIVWGQKGVWFALLDIP 173 Query: 175 AESPITAMGNAM---DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFK 231 I+ +G A+ D +LL+V G I D F Q L+ +MS+QDI+DE K Sbjct: 174 PRRAIS-LGAAILVKDFFIFASLLLVPGAI-----DWFLQRRFFLESQKMSKQDIKDEHK 227 Query: 232 QSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAK 291 + +G+P +K RIR++QR AR RMM V KA V++ NP HY+VAL+Y E+ M+ P V AK Sbjct: 228 EVDGNPLIKSRIRRLQRRIARMRMMKSVEKASVVLINPEHYAVALRYTES-MTVPIVTAK 286 Query: 292 GAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 G +AL+IREI + VP LEAP +AR+LY+ +IG IP LY AVA VLA++ Sbjct: 287 GIDTIALKIREIAKIHGVPILEAPSMARSLYKVCDIGDLIPAGLYEAVAIVLAYI 341 >UniRef50_C6MMA1 Flagellar biosynthetic protein FlhB n=1 Tax=Geobacter sp. M18 RepID=C6MMA1_9DELT Length = 352 Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 125/369 (33%), Positives = 200/369 (54%), Gaps = 36/369 (9%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD+ KTE PT ++ A+ +G + RSRE+TS + L+ + ++ + + L G + Sbjct: 1 MSDDKHSKTEKPTSKKISDAKSKGNVARSREMTSAVTLITAMIALYASSGIMLKTLQGTM 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAM---LALLPLISGVVLVALISPVMLGGLVFSG 117 SI P G L+I+E + L P + ++ L + GG+ S Sbjct: 61 KDIFGGLASIEITPG---GVHHLMIKEFANLGIMLTPFLLVGIISGLAVEISQGGINLSS 117 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 + L+ +LNP+ G+ R+F+ + +++K+ +K +VG + L ++ L+ + Sbjct: 118 EKLKFDLGRLNPVQGMGRLFNKDSVFQVVKSFIKMGIVGYMAYKILAEEMEGIIFLVDQ- 176 Query: 178 PITAMGNAMDLVGL---------------CALLVVLGVIPMVGFDVFFQIFSHLKKLRMS 222 DL+G+ C +L++L V+ D+ F + L L+M+ Sbjct: 177 ---------DLLGILQFIGHISFKIVLHTCGVLIILAVL-----DLAFVKWRFLDNLKMT 222 Query: 223 RQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENK 282 +Q+++DE K +EGDP +KG+ RQ ARRRM +P ADV+V NPTHY+VAL+YD K Sbjct: 223 KQEVKDEHKNTEGDPAIKGKQRQKAFQMARRRMRQIIPTADVVVTNPTHYAVALKYDRLK 282 Query: 283 MSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEV 342 M+AP V+ KG +AL+I+ + ENNV +E LAR LY E G +IP L+AAVAE+ Sbjct: 283 MAAPVVLFKGVDQMALQIKIVARENNVTLVENRFLARELYAQVEEGSEIPEGLFAAVAEI 342 Query: 343 LAWVWQLKR 351 LA+V+ LKR Sbjct: 343 LAYVYSLKR 351 >UniRef50_B6AMB2 Flagellar biosynthesis protein, FlhB n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AMB2_9BACT Length = 362 Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 138/357 (38%), Positives = 205/357 (57%), Gaps = 10/357 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+DE + K E PT +LEKAREEGQ+ RSRE+ SL LL + + G ++ L + Sbjct: 1 MADEFEQKQEEPTARKLEKAREEGQVARSREVGSLFFLLAALLLFGSVGHTVVVGLENQM 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 G SI P+ I + ++ + PL G + ++++ + G V+S K+L Sbjct: 61 EQGFVEAPSIRLTPDSIGPYLGKILWNTLKTGFPLWGGFLAASILAFLFQGPPVWSVKAL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK+ +++P+ G+ R+FS ++ EL K ++K +LV V + L W ++ L A Sbjct: 121 VPKWERVSPVKGMGRLFSGRSLIELAKYLVKVLLVMFVVLWSLRGDWERLPALQAAGVHR 180 Query: 181 AMGNAMD-----LVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 G L L L VV+ ++ D Q + LRM+R +IR+EFK++EG Sbjct: 181 FFGALTGFLRDALYRLIPLFVVIAIL-----DFLLQRIQLNRSLRMTRSEIREEFKETEG 235 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DPHV+ RIR +QRA ARRRMMA V A V+V NPTH++VA++Y+ M+AP VVAKG Sbjct: 236 DPHVRSRIRSIQRAMARRRMMAKVKTATVVVTNPTHFAVAIRYEPMTMAAPVVVAKGQDE 295 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 VAL IR+I E VP +E PPLAR LY + ++IP + Y AVAE+L+ +++ W Sbjct: 296 VALNIRKIAREARVPVMENPPLARTLYAACPLDREIPVEFYQAVAEILSLLYERGHW 352 >UniRef50_O54243 Flagellar biosynthetic protein flhB n=46 Tax=Rhizobiales RepID=FLHB_RHIME Length = 360 Score = 200 bits (509), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 116/354 (32%), Positives = 193/354 (54%), Gaps = 19/354 (5%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLL-ILLVGVSVIWF---GGVSLARRLSGM 59 + D KTEAP+ ++ A E+G +P SRE+T+ L + + V++F G ++A L + Sbjct: 6 DKDSKTEAPSEKKISDATEKGNVPFSREVTAFASTLAIYIFVVFFLSDGAANMAEALKDI 65 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG-- 117 + D ++ ++L + +LP+ ++L + G +F Sbjct: 66 FEQPEAWRLDTATDAVALISHVVL---KCAALVLPVFILLILFGV------GSSIFQNLP 116 Query: 118 ----KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL 173 +QPK+++++P G KR++ Q E K++ K I+V V LW+ + + + Sbjct: 117 RPVLDRIQPKWNRVSPAAGFKRIYGVQGLVEFGKSLFKIIVVSIVVVLVLWNDYFATLDM 176 Query: 174 MAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQS 233 M P+T + + ++V+ + D+F+ +LRM+RQ+++DE KQS Sbjct: 177 MFSDPVTIFTTMISDLKQIIIVVLFATATLAIVDLFWTRHHWYTELRMTRQEVKDELKQS 236 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 +GDP VK R+R MQR AR+RM++ VP+A +I+ NPTHY+VAL+Y + AP VVA G Sbjct: 237 QGDPIVKSRLRSMQRDRARKRMISSVPRATLIIANPTHYAVALRYVREESDAPVVVAMGK 296 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW 347 LVAL+IREI +N +P E PPLAR+++ + IP Y AVAE++ V+ Sbjct: 297 DLVALKIREIAEKNGIPVFEDPPLARSMFAQVSVDSVIPPVFYKAVAELIHRVY 350 >UniRef50_A8U5W0 Flagellar biosynthesis protein B n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5W0_9LACT Length = 355 Score = 200 bits (509), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 125/364 (34%), Positives = 200/364 (54%), Gaps = 35/364 (9%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGV-SVIWFGGVSLARRL---SGM 59 E D KTE +P +L AR++G+IP+S +LTS + +V + S + G L L Sbjct: 3 EKDGKTEKASPKKLRDARKKGEIPKSPDLTSAVTFIVFILSATFLGNYILKNSLLYLQNY 62 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L+AG D + ND I + IL ++ P ++ + A IS ++ G +FS + Sbjct: 63 LTAGFSVD-GLENDLADIGMKAILF---TLVLAGPFLAIAFVAAFISSIVQTGFLFSAEP 118 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQM---MRLMAE 176 ++ K SK+NP+ G K MFS +T L+K + K LV W + + + L+ Sbjct: 119 IKFKLSKINPISGFKNMFSKKTLFTLVKNVAKLTLV-------FWMAYKTLETSIYLIIN 171 Query: 177 SPITAMGNAMDLVGLCALLVVLGV------IPMVGFDVFFQIFSHLKKLRMSRQDIRDEF 230 S +++G + L++ LG + + D +Q++ H K LRMS+Q+I+DE+ Sbjct: 172 S--SSIGTEKIFFLMSDLVMELGTQLGVLLLILGLVDYIYQVYDHRKNLRMSKQEIKDEY 229 Query: 231 KQSEGDPHVKG----RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAP 286 K+SEGDP +K R RQ+ + A R +V A ++ NPTH ++A++Y++ K P Sbjct: 230 KESEGDPQIKSQRRQRYRQLTKGALR-----EVETATAVITNPTHLAIAIRYEKGKDEVP 284 Query: 287 KVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 +VAKGA A +IRE +VP +E P+ARA+Y+ EIGQ +P LY A+AE+LA V Sbjct: 285 IIVAKGADHQAAKIRERAKAFDVPIIENKPVARAMYKSVEIGQPVPIDLYQAIAEILALV 344 Query: 347 WQLK 350 +Q++ Sbjct: 345 YQME 348 >UniRef50_Q0FML8 Flagellar biosynthesis protein B n=4 Tax=Rhodobacteraceae RepID=Q0FML8_9RHOB Length = 375 Score = 200 bits (508), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 121/359 (33%), Positives = 213/359 (59%), Gaps = 13/359 (3%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML- 60 ++ D+KTE PT +L KARE+G + S+E +++ +L ++ F S++ L+G+ Sbjct: 5 DEDKDNKTEEPTERKLRKAREKGDVASSKEAGNVMAVLSLFAITAFVLPSVSAPLAGVFR 64 Query: 61 ----SAG-LHF--DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGL 113 SAG +H D S + D + +++ R + L PL++ +V+ AL + G + Sbjct: 65 NVLESAGQVHVGTDLSGLRDLGAVSWKVL---RGVGILLGPLMALMVIGALAGVALQGEV 121 Query: 114 VFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL 173 V + + L+PK+SK++P+ G KR+FS E K++ K +LVG + G+ + + Q+ + Sbjct: 122 VVASERLKPKWSKISPISGFKRLFSLAAFVEFFKSVTKVLLVGVIAGWVVLNAVGQIWQT 181 Query: 174 MAESPITAMGNAMDLVGLCALLVVLGVIPMVGF-DVFFQIFSHLKKLRMSRQDIRDEFKQ 232 P + + + LL+ L ++ ++ D+ ++ F H +K RMS ++I+DE K+ Sbjct: 182 QGLVP-EMVTDFIRAEAARMLLITLALVSVIAVADILWKRFDHRRKQRMSMKEIKDEVKE 240 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 +EGDP ++ + ++R AR+R+ VP+A V++ NPTH++VAL+Y+ AP VAKG Sbjct: 241 TEGDPLIRSKRMNIRRERARQRLAQAVPRATVVLTNPTHFAVALKYENGVDMAPVCVAKG 300 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 A L+A RIRE+ EN +P +E PLARAL+ AE+ + IP + + AVA ++ ++ L+R Sbjct: 301 ADLLAARIRELAKENEIPMVENRPLARALHDVAELDRPIPVEHWEAVAAIIGYIMDLER 359 >UniRef50_Q316G6 Flagellar biosynthetic protein FlhB n=7 Tax=Desulfovibrionales RepID=Q316G6_DESDG Length = 357 Score = 200 bits (508), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 123/357 (34%), Positives = 202/357 (56%), Gaps = 13/357 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M + +TE TP R KAR EG +P+S+E+ + + G ++ +A + G+ Sbjct: 1 MPQQDPSRTEQATPKRRRKARGEGNVPKSQEVPKTFVTMAGTIALYVYMDHIASEMMGLY 60 Query: 61 SAGLHFDHSII---NDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 HF + + P + ++ + + L LLP++ + LVA + + G +++ Sbjct: 61 E---HFFRNAVMFEATPQAVYDLLLWISGKLALMLLPIMLFLALVAYVVIRLQVGKLWAP 117 Query: 118 KSLQPKFSKLNPLPGIKRMF-SAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 K +PKF++ N + G+KR+F S QT L K+IL ++G + + + L Sbjct: 118 KVFKPKFARFNLIKGLKRLFISPQTLIRLGKSILMAAVIGIAPYIVIRNEMHHFLPLFYA 177 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGF---DVFFQIFSHLKKLRMSRQDIRDEFKQS 233 +P TA+G M +G+ +V ++PM+ D+++ + + + L+M++ +++DE KQ+ Sbjct: 178 TP-TAIGVYMLEMGMK--MVKYAMLPMLVIAIADLWYTRWDYEENLKMTKDEVKDERKQA 234 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EGDP VK + RQ +RM+ +VPKADV+V NPTHY+VAL+YD + AP V+AKG Sbjct: 235 EGDPAVKAQQRQKMMEVMAQRMLENVPKADVVVTNPTHYAVALRYDAVEAPAPVVLAKGV 294 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +A RI+E+ E+ VP E PLARALYR E+G IP +LY AVA +LA + + K Sbjct: 295 DHLAERIKEVAREHRVPIRENVPLARALYRQVEVGDMIPEELYQAVASLLASLMKFK 351 >UniRef50_C0GJG3 Type III secretion exporter n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJG3_9FIRM Length = 309 Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 106/267 (39%), Positives = 168/267 (62%), Gaps = 10/267 (3%) Query: 89 MLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKA 148 L + P+ + ++ L + G +F+ + L P+F++LNP G K++ S + EL K+ Sbjct: 48 FLFMAPVFAVSLIAGLAVNYLQVGFLFTTEPLNPQFNRLNPAEGFKKIASKRALFELAKS 107 Query: 149 ILKTILVGSVTGFFLWHHWPQMMRLMAESPI----TAMGNAMDL-VGLCALLVVLGVIPM 203 +LK ++VG V F+ + ++ + + T +++L + + AL +VL V+ Sbjct: 108 LLKVLMVGFVAFLFVRGNLENLLATLYQDAAGVWETLRSLSLNLALRIGALFLVLSVL-- 165 Query: 204 VGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKAD 263 D +Q + H + L+MS+Q+I++E KQ EGDP +K ++R+ QR+ A +RMM DVP+A Sbjct: 166 ---DYIYQRYEHNQNLKMSKQEIKEEHKQMEGDPQLKSQLRERQRSIATQRMMQDVPEAT 222 Query: 264 VIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYR 323 V++ NPT +VA++Y E++ AP VVAKGA L+A RIRE ENNVP +E P+AR LY Sbjct: 223 VVITNPTELAVAIRYREDRDEAPTVVAKGAALMAKRIRETAKENNVPIMENKPVARMLYD 282 Query: 324 HAEIGQQIPGQLYAAVAEVLAWVWQLK 350 EIGQ+IP LY AVAE+LA V++L+ Sbjct: 283 QVEIGQEIPVDLYQAVAEILALVYKLR 309 >UniRef50_Q7UXG2 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodopirellula baltica RepID=Q7UXG2_RHOBA Length = 360 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 117/352 (33%), Positives = 202/352 (57%), Gaps = 4/352 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD DK + + + +ARE+GQI +S++LTS +LL + ++ G ++A LSG + Sbjct: 1 MSDSGGDKKHSASERKRRQAREKGQIAKSQDLTSATLLLAAIGALYAIGGNMAAYLSGGI 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAM-LALLPLISGVVLVALISPVMLGGLVFSGKS 119 L + + N Q +L I + + +A +P++ + + ++ V GL+ S Sbjct: 61 EQALG-ETKLAPMTNQDATQYMLQISQRLAMAAVPMMILMFIGGVLINVFQSGLLLSTDK 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L PK S ++P+ G KR+ S Q L+ + K ++G + L H ++ MA + Sbjct: 120 LMPKLSNISPMSGAKRILSLQGVMRLVFGMFKVGIIGGIAYLALRAHHGDVIS-MASLSV 178 Query: 180 TAMGNAM-DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + +M D + +L + +G+ + + +Q + + L M+ Q++RDE K +E DP Sbjct: 179 PQLAKSMFDTLFGVSLWIGVGLFVLALLEYVYQWWKTEQDLMMTDQEVRDEMKDTEADPQ 238 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 V R RQ+ R A ++ ++VPKADV+ +NPT ++A++YD M AP VVAKGAG++A Sbjct: 239 VAARRRQVARQLAMGQLGSEVPKADVVASNPTELAIAIKYDPLTMPAPIVVAKGAGMIAQ 298 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 RIR + EN +P +E LA+ALY+ ++GQ++P + Y AVAE+L +V+Q++ Sbjct: 299 RIRRLALENGIPVVERKELAQALYKLVDVGQEVPAEQYQAVAEILRYVYQMQ 350 >UniRef50_D1BCL3 Flagellar biosynthesis pathway, component FlhB n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCL3_SANKS Length = 422 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 142/357 (39%), Positives = 211/357 (59%), Gaps = 21/357 (5%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 +S +KTE TP R+++ R++G + RS++L++ L +G + + V+L R + Sbjct: 6 DSGEKTEQATPKRMKQNRKDGALQRSQDLSAWL--GIGAAAVMLP-VALGRGAEAAVDQ- 61 Query: 64 LHFDHSIINDPNLILGQIILLIREAM----LALLPLISGVVLVALISPVMLGGLVFSGKS 119 L II++P+ ++ ++ L+ M +L PL+ VVL A++ V GGL + K Sbjct: 62 LSAVREIISNPDPLV--VVDLLGTGMDSILTSLTPLLVVVVLAAVVGNVSQGGLHVATKK 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMR---LMAE 176 L+PKF N + GIK F Q + +KA+ KT++VG V + + P ++ L Sbjct: 120 LKPKFDHFNLVKGIKNTFGGQALWQGVKALAKTLVVGLVLYIAIQNLMPVLLTAGGLSVG 179 Query: 177 SPITAMGNAMDLVGLCALL--VVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 + ++A G G+ ALL V I + D+ + + KK RMS+ +++ E KQSE Sbjct: 180 ALLSAAGG-----GIQALLWSAVAAGIALAILDLVVVMKRNRKKTRMSKYEVKQENKQSE 234 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDP +KG IR Q A +R RM+A V ADV++ NPTH +VAL+Y E AP+VVAKGAG Sbjct: 235 GDPQLKGAIRSKQIAMSRNRMIASVGDADVVLVNPTHVAVALKY-EAGTGAPRVVAKGAG 293 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 VA RIRE+ AE +VP + PLARAL+ EIG++IP LYAAVA+VLA+V LKR Sbjct: 294 HVAARIREVAAEKSVPMISDVPLARALHGACEIGEEIPADLYAAVAQVLAFVMALKR 350 >UniRef50_C0AUZ3 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AUZ3_9ENTR Length = 227 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 100/219 (45%), Positives = 148/219 (67%), Gaps = 1/219 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD +KTE PTPH+ EKA+++GQI RS+EL+S+L++L GVS++W G + R L M Sbjct: 1 MAEDSDLEKTEEPTPHKREKAKKDGQIVRSKELSSVLMILGGVSLLWMSGGFITRELYAM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L+ G F+H +I + NL++ + LI++A+ AL P+ G+V VA+ +LGG+ FS KS Sbjct: 61 LTEGFTFNHHLIGNENLLIPRFGSLIKQAVFALSPVFLGLVFVAIGGSALLGGINFSSKS 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++ K NP+ G+KR+FS AEL KAILK+ VG FLWH+W ++ L+ P+ Sbjct: 121 IKFDPKKWNPISGLKRIFSMNALAELFKAILKSTFVGIAATVFLWHNWNDILHLITLPPL 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKK 218 +A+ NAM L+ + V +IPMV FD+ FQI SHLKK Sbjct: 181 SALANAMQLLIFAVYITVFMLIPMVAFDIIFQIRSHLKK 219 >UniRef50_UPI0001C312BE flagellar biosynthetic protein FlhB n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312BE Length = 358 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 124/363 (34%), Positives = 200/363 (55%), Gaps = 20/363 (5%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +DD+TE TP + + AR GQ+ RS ++ ++L+ G+ + G ++ G + + Sbjct: 2 ADDRTERATPRKRDDARRRGQVARSMDVNGAVVLIAGLFALSLLGPAVV----GAMETSM 57 Query: 65 HFDHSIINDPNLIL------GQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 I+DP L G + +R LA+ P+ + + +++ + GL S + Sbjct: 58 RDSFERISDPQAALTAGGLEGIAMSTLRTLALAIGPVAAVCAIAGIVANLGQVGLKPSAE 117 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +L+P+ ++NPL G + +F + E K+I+K ++G + + ++ + SP Sbjct: 118 ALKPQAQRINPLSGARNVFGPRMFFEGAKSIVKVAVIGVIVAMAVAPKMTELSATVGASP 177 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + LV + + + + D +Q ++H K+LRMS QD++DEF+ + Sbjct: 178 GQLAAELVSLVLSISQRAAIAYLVIGAIDYAYQKYTHEKQLRMSMQDVKDEFRSQQLPAE 237 Query: 239 VKG--RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 VK R R MQ+A R RMM+ VP ADV+V NPTH++VAL+YD K AP VVAKG L+ Sbjct: 238 VKSMQRRRMMQQA--RARMMSAVPDADVVVTNPTHFAVALKYDGTK-PAPIVVAKGQDLI 294 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 AL+IR + AE++VP +E PLAR+L+ E+GQ IP LY AVA+VLA V +R+AG Sbjct: 295 ALQIRRLAAEHDVPVIENRPLARSLHATVEVGQMIPEDLYQAVAQVLAHV-----YRVAG 349 Query: 357 GQR 359 R Sbjct: 350 NAR 352 >UniRef50_B9KJE4 Flagellar biosynthetic protein FlhB n=7 Tax=Rhodobacteraceae RepID=B9KJE4_RHOSK Length = 382 Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 148/389 (38%), Positives = 217/389 (55%), Gaps = 37/389 (9%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 D+ +KTE PT R E+ARE+G I S+E V V GG++L + G+L A Sbjct: 7 DDGQEKTEEPTQKRREQAREDGSIVTSKE--------VFVFATLAGGLALLMMIEGLLPA 58 Query: 63 GLH-FDHSIINDPNLILGQIILL-----IREAMLALLPLISGVVLVALISPVMLGGLVFS 116 + + ++ +P L +I ++ RE ++A L + ++ + L+ +GG+ FS Sbjct: 59 LVRGWSGYLVIEPGADLERIAMVRLGQAWREVLIAGLVVSVPLLALVLLVQSAMGGINFS 118 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 K+L K S++NP G+KRM S + EL KA+ K L+ V L + RL Sbjct: 119 TKALSFKASRINPAAGLKRMVSLKALVELAKAVAKVALLIGVAVLVLRDELSPLDRLWTA 178 Query: 177 SPITAMGNAMDLVG------LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEF 230 +P G+A ++G + ALL+VL VI G D+ +Q +S ++MSRQ++++E Sbjct: 179 AP----GDAATVLGAGLIRLVSALLIVLAVIG--GLDLVWQAWSLTNSMKMSRQELKEES 232 Query: 231 KQSEGDPHVKGRIRQMQ----RAAARRRM-MADVPKADVIVNNPTHYSVALQYDENKMSA 285 K+S G P VKGR+R+MQ R ARRR + DVP+A IV NPTH++VAL+Y + A Sbjct: 233 KESNGSPEVKGRMRRMQMEASRNGARRRAALDDVPQATAIVTNPTHFAVALRYVPGETPA 292 Query: 286 PKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAW 345 P ++A G G +AL I E G + + TL P LARALY +IGQ+IP LY AVA VLA Sbjct: 293 PVILAMGKGPMALDIIERGRKAGIGTLRIPLLARALYFTGDIGQEIPDGLYGAVAVVLAH 352 Query: 346 VWQLKRWRLAGGQRPVQPTHLPVPEALDF 374 V++L R G+ P + VPE L F Sbjct: 353 VYRLDR-----GEAAEMP-DVDVPEGLAF 375 >UniRef50_Q12T86 Type III secretion exporter n=1 Tax=Shewanella denitrificans OS217 RepID=Q12T86_SHEDO Length = 352 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 112/345 (32%), Positives = 210/345 (60%), Gaps = 7/345 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSDE K+E + ++L +AR+ GQ+ +S EL + +++L+ ++ + SLA+ L ++ Sbjct: 1 MSDE--HKSEQASQYKLNEARKRGQLAKSMELNAWVLVLISLAYFYLFSESLAKELMSVI 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 S L S+ N +L + A+L L+P S +V+ +++ V+L G VFS + L Sbjct: 59 SRYLQILGSVDIRNNFMLIAFDIFYPLAVL-LVPFFSILVVASIVINVLLNGFVFSFEPL 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PKF KLNP+ G+K++FS + E +K +K LV ++ G+ L++ + + + ++S ++ Sbjct: 118 SPKFEKLNPVKGLKKIFSKKNLFEFIKQTIKLFLV-ALCGYLLFYGVVERLIIASQSHVS 176 Query: 181 AM-GNAMDLVGL-CALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 ++ G A+ L + ++L + P++ DV F + K++ MS +++R+E+K+ EGDP Sbjct: 177 SLLGMALSQETLRLSFYLLLTIFPLIALDVLFTRWDFKKQMMMSHREVREEYKKKEGDPQ 236 Query: 239 VKGRIRQMQRAAARRRM-MADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K + +++Q+ A++ + + V +ADVI+NNPTH SVAL++D M++P VVA G+G++ Sbjct: 237 IKSKRKEVQKELAKKLIALGKVKEADVIINNPTHISVALKFDPLTMNSPIVVASGSGVLG 296 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEV 342 IR I ++++ + LAR LY+ IGQ +P + + +A + Sbjct: 297 KFIRRIAVKHSLLQVTNISLARRLYKQLAIGQPLPAEYFDELAPI 341 >UniRef50_A6W8L6 Type III secretion exporter n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8L6_KINRD Length = 360 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 139/353 (39%), Positives = 203/353 (57%), Gaps = 17/353 (4%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWF---GGVSLARRLSGMLS 61 S +KTE PTP +L++AR+EG IP SR++ + L G I G L R+ + Sbjct: 2 SGEKTEKPTPKKLKEARDEGNIPFSRDVAAWLSTGAGAVTIPHTIESGQVLLRKAFAGVG 61 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAML--ALLPLISGVVLVALISPVMLGGLVFSGKS 119 ++ DP L A + L PL + V ++S + G L + K Sbjct: 62 -------AVAADPEPARALAALAATFAGIPGVLGPLAAATVFAVVVSGGVQGTLRPAPKK 114 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMR--LMAES 177 L+PKFS LNP+ G K+ + Q E K++LKT+++G+V + + PQ + LM + Sbjct: 115 LKPKFSNLNPVNGFKQHWGPQALWEGTKSLLKTVVIGTVMWLVVKNLVPQFVGSGLMPLA 174 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + + +V + A+ V+LG+I G D +KKLRMS+QDI+ E K +EGDP Sbjct: 175 SVLTLTKGA-VVKIVAVTVLLGLIIAAG-DYAMSYRRTMKKLRMSKQDIKMEHKNAEGDP 232 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +KG IR Q A +R RMM+DV ADV++ NPTH +VAL+Y E APKVVAKGAG +A Sbjct: 233 LLKGAIRSKQMAMSRNRMMSDVASADVVLVNPTHIAVALRY-EPGTGAPKVVAKGAGAIA 291 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +IRE EN+VP ++ LAR +Y+ +IGQ+IP + +AAVA+VLA+V L+ Sbjct: 292 SKIREKAKENDVPLVKDVQLARTMYKSCKIGQEIPPEFFAAVAKVLAFVMNLR 344 >UniRef50_Q2RQH7 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQH7_RHORT Length = 356 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 133/356 (37%), Positives = 208/356 (58%), Gaps = 12/356 (3%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLIL-----LVGVSVIWFGG-VSLARR 55 D+ D KTE P+ +L KARE+GQ+ +S+E+ S L+L +V V W V+L R Sbjct: 3 DDDKDSKTEDPSSRKLGKAREDGQVAQSQEVKSFLMLGGALFMVAVMGGWIADKVALRVR 62 Query: 56 LSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVF 115 + H D + D L I L+ +A+ +++A++ V GL+F Sbjct: 63 VFLEQPDTFHLDAVGLRDLLARLLLDIGLVLAMPIAMF------IVLAILGGVGQFGLIF 116 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 S K + P+ K++PL G KR+FS + E +K I+K ++V ++ + M Sbjct: 117 SAKKITPELQKISPLAGFKRLFSVRALVEGVKGIVKVVVVSAIVAALMLPRLRTPELFMD 176 Query: 176 ESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 + + +G L+ + + VV V + D FQ + H+++L+M++Q+++DE K +EG Sbjct: 177 QDILVTLGQIHRLLVVLLISVVTIVGAIAAADFAFQKYKHIEELKMTKQEVKDEHKNAEG 236 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DP +K +IRQ++ AR RMMA VP+A V++ NPTH++VAL+YD + MSAP +VAKG Sbjct: 237 DPQIKSKIRQLRMRRARERMMARVPEASVVITNPTHFAVALKYDMDMMSAPVLVAKGQDF 296 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +AL+IRE+ EN VP +E PPLARAL+ EI +IP Y AVAEV+ +V +LK+ Sbjct: 297 IALKIREVAEENEVPIVENPPLARALFAAVEIDHEIPPDHYKAVAEVIGYVMRLKK 352 >UniRef50_A8IPK5 Flagellar biosynthetic protein n=14 Tax=Alphaproteobacteria RepID=A8IPK5_AZOC5 Length = 359 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 127/356 (35%), Positives = 196/356 (55%), Gaps = 15/356 (4%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGV-SVIWFGGVSLARRLS 57 MSD++D KTE T ++ A E+G +P SRE T+L L+G+ V+ F V+ R L+ Sbjct: 1 MSDDTDKESKTEEATERKVSDALEKGNVPYSRE-TALFASLLGILGVLTFFVVNPVRILT 59 Query: 58 GMLS------AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLG 111 L+ AG S D + L +LL+ +L L+ +A Sbjct: 60 VELTHFLDNPAGFTLAGS---DDAIALAWGVLLLMGQVLLPAVLLLAAAGLAASLFQNTP 116 Query: 112 GLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMM 171 LV + +QP+FS+++P+ G R+FS G E K+ K ++V + G L ++M Sbjct: 117 RLVLN--RIQPQFSRIDPMKGWTRIFSRDGGIEFGKSAFKLVVVAVICGVLLMSERDKVM 174 Query: 172 RLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFK 231 M P+ + L V + I +V D+ + F +LRM++Q++++E K Sbjct: 175 NAMYSDPLLMPSVILSLATRLISAVCVATIVLVALDLVWSRFHWRAELRMTKQEVKEEMK 234 Query: 232 QSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAK 291 Q EGDP VK R+R + + AR+RMM+ VPKA ++V NPTHY++AL YD K AP+VVAK Sbjct: 235 QQEGDPMVKARMRSLAQQRARQRMMSSVPKATLVVANPTHYAIALYYDRQKGGAPQVVAK 294 Query: 292 GAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW 347 G L+AL+IREI ++P +E PLARA+Y E+ Q IP + Y VA++L +++ Sbjct: 295 GTDLIALKIREIAERCSIPVIEDKPLARAMYDAVEVDQWIPPEFYKPVAKILYFIY 350 >UniRef50_C8WBS8 Type III secretion exporter n=3 Tax=Zymomonas mobilis RepID=C8WBS8_ZYMMN Length = 380 Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 133/378 (35%), Positives = 205/378 (54%), Gaps = 20/378 (5%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVS--LARRLSGMLS 61 + D KTEAPT RL + E+G + +S+EL +L S+ WF +S + L ML Sbjct: 7 DQDQKTEAPTQKRLREVAEKGDVLQSKELGIAFAMLA--SLAWFLMISHRMVYDLGIMLK 64 Query: 62 AGLHFDHSIIN--DPNLILGQIILLIREAMLALLPLISGVVLVALISPV---MLGGLVFS 116 GL FD + + DP + ++I I +LP VL+A + +LG L F Sbjct: 65 MGLSFDFNAFSKFDPFSVFIRLITCI------ILPFSMLFVLMAFAAIAAPAVLGSLGFR 118 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 ++L K +LNP+ G R+F Q EL K+I+K +L+GS+ + LW P +M+L Sbjct: 119 WEALNFKPERLNPIAGFSRVFGMQGLFELGKSIVKVLLIGSLGLWILWQRLPVIMQLGRH 178 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 A+ + + L++ + + + DV QIF ++LRMS+Q+I+DE KQ+EG Sbjct: 179 DLKAAINEIGHIFLILVLVMSVALAVVAAIDVPIQIFRRNRRLRMSKQEIKDEHKQTEGS 238 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P +K +RQ Q A R V + V++ NPTH++VAL+Y + AP V AKG + Sbjct: 239 PEIKAAVRQRQIAVFRASNRKAVQDSTVVITNPTHFAVALKYKAGEDIAPIVTAKGIDEL 298 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 AL +RE+ E++VP L P LARA+Y + G+ I +LY AVA +LA++ +RL Sbjct: 299 ALALREMADESDVPVLHYPLLARAIYFTSNSGELIREELYKAVASILAFI-----FRLNA 353 Query: 357 GQRPVQPTHLPVPEALDF 374 G+ + + VPE + F Sbjct: 354 GEEGLTLPVIDVPEEVRF 371 >UniRef50_C2KTQ0 Flagellar biosynthesis protein FlhB n=3 Tax=Mobiluncus RepID=C2KTQ0_9ACTO Length = 373 Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 138/370 (37%), Positives = 205/370 (55%), Gaps = 29/370 (7%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD S +KTE TPH L+K RE+G + +S++LT + L G +++ S M Sbjct: 1 MSD-SGEKTEKATPHHLKKVREDGGLQKSQDLTGWISLAAGAALL----------PSLMD 49 Query: 61 SAGLHFDHSI------INDPNL--ILGQIILLIREAMLALLPLISGVVLVALISPVMLGG 112 +AG + I +N ++ ILG + ++ + LLP + ++LVA++ ++ G Sbjct: 50 TAGHNGREQIAAVRELVNGVSMTEILGFLGQSLQGVLWTLLPFMLAIMLVAVLVNIIQGK 109 Query: 113 LVF-SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMM 171 VF S K L+PK LN + G+K++ Q LKA+LKT+ VG V + +M Sbjct: 110 GVFPSAKHLKPKLQNLNLVKGVKKIAGVQALWNGLKALLKTVAVGVVLYLII----SGVM 165 Query: 172 RLMAE----SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIR 227 +M S + D + L V+ I + D F + K+ +MS+Q+++ Sbjct: 166 EIMGAAGHMSGRDLVNYGTDKMWLLIWASVIAGIVVSILDALFIFKKNQKQTKMSKQEVK 225 Query: 228 DEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPK 287 +E+KQ EGDP +K + R +R RMM D +ADV+V NPTHY+VAL+Y+ + APK Sbjct: 226 EEYKQQEGDPQIKSQRRSRALQMSRNRMMNDAAEADVVVVNPTHYAVALKYEPGQ-GAPK 284 Query: 288 VVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW 347 VVAKG +A RIREI +N VP +E LAR LY AEIG +IP +LY AVA+VLA+ Sbjct: 285 VVAKGVDHLASRIREIALDNRVPMVEDVALARTLYSTAEIGVEIPEELYTAVAQVLAFCL 344 Query: 348 QLKRWRLAGG 357 LK+ GG Sbjct: 345 LLKKRGARGG 354 >UniRef50_O67813 Flagellar biosynthetic protein flhB n=1 Tax=Aquifex aeolicus RepID=FLHB_AQUAE Length = 350 Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 125/350 (35%), Positives = 202/350 (57%), Gaps = 11/350 (3%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLH 65 + KTE TP++ K REEG + +S E+ S L++L+ + ++ F G +A+ + + A Sbjct: 4 EHKTERATPYKRRKVREEGNVAKSHEIASSLVVLLSLLLLLFLGTYIAKEVILIFLAVTG 63 Query: 66 FDHSIINDPNLILGQIILLIREAMLALL-PLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + H+ I++ LG + E ++ +L PL +LV ++S V G +F+ K L K+ Sbjct: 64 YVHADISE----LGSLYENFYENIVKVLTPLFFLALLVVILSHVAQFGFIFTLKPLSFKW 119 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 ++NP GIKR+ S T E +K LK L+ + F L + ++ S Sbjct: 120 ERINPFEGIKRLISLTTLFETVKNTLKAFLLIGIAVFVLKG---SLYFFLSSSTYPLAET 176 Query: 185 AMDLVGLCAL-LVVLGVIPM-VGF-DVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + A+ L+ LGV+ + + F D F+ + + KK+ MSR+++++E+KQ EG P VK Sbjct: 177 LKSFIKTSAITLITLGVVALLIAFLDYAFKRWQYEKKIMMSRRELKEEYKQLEGHPEVKS 236 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RI+ R A+ RMMA+VPKA V++ NPTH ++AL+Y+ K AP VVAKG G +A +I Sbjct: 237 RIKARMRELAKSRMMAEVPKATVVITNPTHIAIALKYNPEKDKAPVVVAKGKGTIAQKIV 296 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 EI ++P + P LARALY E+G++I + Y AVAE++A+V K+ Sbjct: 297 EIAENYSIPVVRKPELARALYPAVEVGKEISPKFYKAVAEIIAYVMFKKK 346 >UniRef50_D2R543 Type III secretion exporter n=3 Tax=Bacteria RepID=D2R543_9PLAN Length = 363 Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 126/369 (34%), Positives = 194/369 (52%), Gaps = 26/369 (7%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M D++ +K+ T HR +KAREEGQ+ +S++LTS +L+ + ++W+ SGM Sbjct: 1 MDDDNGEKSHEATQHRRDKAREEGQVVKSQDLTSAAMLMACLLLLWYFS-------SGMF 53 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREA-MLALLPLISGVVL------------VALISP 107 F + I GQ+ I A + + I G++ A+ Sbjct: 54 ELVGAFTR------DQITGQLWQPITLADVTSDFARIGGLLARTLLPLLLMMMLAAITIQ 107 Query: 108 VMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHW 167 + G +F L ++NPL KR+F+ L +LK +L+G V G LW Sbjct: 108 LSQTGFLFLPNKLAMDLERINPLNNSKRIFAVSNLVSLGFGLLKVLLIGVVAGLSLWQQR 167 Query: 168 PQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIR 227 ++ L +S ++ ++ + ++ + D +Q + H + LRM+ Q +R Sbjct: 168 ATILELTDQSAAVIGKFVLETALWTSIKIAAALLVLAILDYGYQWWKHEQDLRMTTQQVR 227 Query: 228 DEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPK 287 +E K+ GDP R +Q+QR R+ +PKADVIV NPT ++ALQYD N M AP Sbjct: 228 EEMKEQTGDPQTMQRRKQIQRQLVMNRLSTSIPKADVIVTNPTELAIALQYDPNTMPAPI 287 Query: 288 VVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW 347 V+AKGAG++A RIR + ENNVP +E LARALY+ E+ Q +P + YAAVAEV+ +V+ Sbjct: 288 VIAKGAGVLAQRIRRLALENNVPVVERKELARALYQLVEVNQPVPSEQYAAVAEVVRYVY 347 Query: 348 QLKRWRLAG 356 QLK +L G Sbjct: 348 QLKGKKLPG 356 >UniRef50_Q01PP8 Type III secretion exporter n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PP8_SOLUE Length = 354 Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 138/372 (37%), Positives = 204/372 (54%), Gaps = 34/372 (9%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLV------GVSVIWFGGV-SLA 53 M+D+S KTE PT RLEKAR EGQ P ++E S L +V WF + Sbjct: 1 MADKSG-KTEQPTQRRLEKARTEGQFPAAKEFVSALQFMVFLGLLGSGGAGWFKQLRQTT 59 Query: 54 RRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGL 113 R L G+ A +I+ ++ QI ++ +L L+ V + + + Sbjct: 60 RSLFGLAFAPELRPEDLIH----VMWQIF---QQLLLPLVMAGVAVAVATVAFRLATTRF 112 Query: 114 VFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHW---PQM 170 S K L P ++ NPL +K + QT L +A + FLW W + Sbjct: 113 GISFKKLMPDAARFNPLSRLKDL-PKQTLPALAQAAF-------LLPVFLWAVWVVGQEK 164 Query: 171 MRLMAESPITAMGNAMDLVGLCALLVVL-----GVIPMVG-FDVFFQIFSHLKKLRMSRQ 224 + P+ ++ + M+L+ CA L+ L GV +VG D+ Q+ H +LRMS+Q Sbjct: 165 LDAFMALPMQSVESGMNLI--CASLMELFWKAAGVFLLVGCVDLARQLQRHKSELRMSKQ 222 Query: 225 DIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMS 284 +IR+E K EG+P +K RIR++QR R++MM DVP A +V NPTHY+VA++Y + M+ Sbjct: 223 EIREEMKDVEGNPQMKARIRRLQRDRVRKQMMKDVPTATAVVVNPTHYAVAIRYQMDGMA 282 Query: 285 APKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLA 344 AP VVAKG +ALRIR+ E+ VP +E PPLA+ALY+ E+GQ+IP LY AVAE+LA Sbjct: 283 APMVVAKGMNHLALRIRQKATEHQVPIIENPPLAQALYKSVEVGQEIPPHLYRAVAEILA 342 Query: 345 WVWQLKRWRLAG 356 ++++L R+ G Sbjct: 343 YIFKLMNGRMPG 354 >UniRef50_C2ED97 Flagellar biosynthesis protein FlhB n=5 Tax=Lactobacillales RepID=C2ED97_9LACO Length = 355 Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 120/371 (32%), Positives = 203/371 (54%), Gaps = 47/371 (12%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 + D KTE PTP R+ +R+ G++ +S ++ + + L V ++++ + Sbjct: 3 DKDGKTEKPTPKRIRDSRKRGEVAKSPDVVAAVALFV-FAMLFVPLCEFSIN-------- 53 Query: 64 LHFDHSIIN------DPNLILGQIILLIREAMLALL----PLISGVVLVALISPVMLGGL 113 HF +N +P+ ++G + + +A+L + P + +++ ++ ++ GL Sbjct: 54 -HFSPYFVNYLEMLANPDQMIGSLGKIAFQAILMIFIMTGPFMLIAIVIGIVGNIVQVGL 112 Query: 114 VFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL 173 +F+ L+P F KLNPL G+K+MFS + L K+++K I+VG + + + + + Sbjct: 113 LFTATPLKPDFKKLNPLNGLKQMFSLRALQNLAKSLVKLIIVG----YLCYKKYVETIPT 168 Query: 174 MAESPITAMGNAM-DLVGLCA--------LLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQ 224 + G + ++ +C LLVV+ V FD FQ ++H+K L+MS+Q Sbjct: 169 LTSLSEVGTGKVLLFMLNICKDLATQIGILLVVVSV-----FDYAFQRYTHMKSLKMSKQ 223 Query: 225 DIRDEFKQSEGDPHVKGRIRQMQRAAARRRMM----ADVPKADVIVNNPTHYSVALQYDE 280 +I+DE KQ EGDP VK QR A R M+ A V A V++ NPTH ++A++YD Sbjct: 224 EIKDEMKQMEGDPQVKA-----QRKAKHREMIRNAVAQVKDATVVLANPTHLAIAIKYDA 278 Query: 281 NKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVA 340 P+V+AKGA VA+RI+E + NVP +E PLARALY + G IP + Y A+A Sbjct: 279 EGAGVPQVLAKGADDVAMRIKEEAKKQNVPIIENKPLARALYPKVDAGDFIPVEFYEAIA 338 Query: 341 EVLAWVWQLKR 351 EV+A V++L++ Sbjct: 339 EVIALVYKLEQ 349 >UniRef50_C2KYZ7 Flagellar biosynthesis protein FlhB n=1 Tax=Oribacterium sinus F0268 RepID=C2KYZ7_9FIRM Length = 361 Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 120/352 (34%), Positives = 203/352 (57%), Gaps = 23/352 (6%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 DKTEAP+ + AR+EG + +SR++ ++ +L + F + + L LS L Sbjct: 5 DKTEAPSEKKRSDARKEGNVFQSRDIVTVAVLFGVFYAVRFMMPFIYKDLRNFLSYILE- 63 Query: 67 DHSIINDPNLILGQIIL-----LIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 ++++P+ I ++ L ++ AM PL+ V + +I+ ++ S K L Sbjct: 64 ---LLDEPSPISNKLYLRFTWLFVKSAM----PLLLVTVFLGVIASLVQTRFNISFKLLT 116 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL----MAES 177 PKFSKLNP+ G+ R+FS + ELLK ILK I++ + + + ++ + S Sbjct: 117 PKFSKLNPMQGLGRIFSKKNVVELLKNILKIIILINFLYSIIKADIIPIAKMVHMDIQNS 176 Query: 178 PITAMGNAMDLVG-LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 + + DL+ +C + +++ + FD +Q + + L+M++Q+++DE+K EG+ Sbjct: 177 SLALVSMMFDLITRVCGVFLIIAL-----FDFMYQKWEYENNLKMTKQEVKDEYKMLEGN 231 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P +KGR++Q RA A +RMM VP ADVI+ NP H ++A++YD +K +AP V+AKG + Sbjct: 232 PEIKGRMKQQMRARANQRMMQQVPDADVIIRNPEHLAIAIKYDPDKNTAPVVLAKGQDEL 291 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 ALRI +G N V +E PLARA+Y +G++IPG Y AVAE+L +++Q Sbjct: 292 ALRIVAVGEANGVTAIENKPLARAMYPLCHVGKEIPGDFYGAVAEILVYIYQ 343 >UniRef50_A1SEN0 Type III secretion exporter n=1 Tax=Nocardioides sp. JS614 RepID=A1SEN0_NOCSJ Length = 381 Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 139/377 (36%), Positives = 212/377 (56%), Gaps = 23/377 (6%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSREL---TSLLILLVGVSVIWFGGVSLARRLSG-ML 60 + +K+E PT R ++ R+EGQ+PRS E+ ++LL++ + + ++ + R L+ M Sbjct: 2 TGEKSEKPTAKRNKENRKEGQVPRSPEIGAWSALLLIAMFLPRLFGHEIDKLRELTTTMF 61 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 S+ D I +LGQ + +L L+ L +G+ +V + + GG + KS+ Sbjct: 62 SSAADADAEIAVQ---LLGQGLW---HVLLVLVVLGAGIAVVGIAGALGQGGFFLATKSV 115 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PK SKLNPLPG KR+F + E K ++++ + +W M+ L+ + Sbjct: 116 KPKLSKLNPLPGFKRIFGPRALWEGTKMLIRS----GIVALLVWLAVKSMLPLIGG--LM 169 Query: 181 AMGNAMDLVGLCAL-----LVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 M +D AL + V GV+ + D Q KK RMS+ +++ E KQSEG Sbjct: 170 PMSLVLDQFASHALSMIRNIAVAGVL-LGAADYLVQRKLMGKKTRMSKDEVKQEHKQSEG 228 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DP +KG IR Q AA+R RMMADVP ADV++ NPTH +VAL+Y+ + AP+VVA+GAG+ Sbjct: 229 DPLLKGAIRSRQLAASRNRMMADVPTADVVLVNPTHVAVALRYEPER-GAPRVVARGAGV 287 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 +A IRE E VP + PLARALY +GQ+IP +L+AAVA+VLA+V + Sbjct: 288 IAAAIREKATEARVPLVRDVPLARALYTSTTVGQEIPTELFAAVAQVLAFVLSRRAQGQH 347 Query: 356 GGQRPVQPTHLPVPEAL 372 GG+ + +PE L Sbjct: 348 GGEHRTPRSVDELPEVL 364 >UniRef50_Q1NGK4 Flagellar biosynthetic protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGK4_9SPHN Length = 378 Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 132/375 (35%), Positives = 200/375 (53%), Gaps = 13/375 (3%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 E +KTE PTP +L+ A ++G I +SREL + L+++ G+ + G SL L ML Sbjct: 6 EGGEKTEKPTPKKLQDAAKKGDILQSRELGTALVVMAGIGCLAVIGPSLIDALRDMLVEA 65 Query: 64 LHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVML----GGLVFSGKS 119 L I D + + LL A LP ++GV+L ++ + G L F + Sbjct: 66 LRIRREDIVDFSPAKRGLDLLASIA----LP-VAGVMLATFLAAIAAPALLGSLGFRPGA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 PK KLNPL G+KR+F Q ELLK+I K L+GS+ + +W ++ L Sbjct: 121 FAPKPEKLNPLSGLKRIFGMQGLIELLKSIAKVGLLGSIGVWLIWDRLTEITGLGKAGIA 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ + ++ L++ G+ + G DV QI K+L MS+Q+++DE K+SEG P + Sbjct: 181 PAIADVGNIFIFTCLVMAGGLFLIAGIDVPAQIMQRAKRLGMSKQEVKDEHKESEGSPEL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KG IR+ Q V +A VI+ NPTH++VAL+Y + +AP VVAKG +A Sbjct: 241 KGHIRRRQFEVLSGSTRKAVAEASVIITNPTHFAVALRYKPGQDAAPVVVAKGCDAIAAS 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IR++ + V L+ P LARA+Y + GQ + LY AVA VLA+V++++ R Sbjct: 301 IRDLADTHGVTVLQYPELARAIYFTSRAGQIVNEGLYMAVATVLAFVFRVENKMAGEMDR 360 Query: 360 PVQPTHLPVPEALDF 374 P + VP+ L F Sbjct: 361 P----FITVPDDLRF 371 >UniRef50_B8H3H7 Flagellar biosynthesis protein FlhB n=6 Tax=Caulobacteraceae RepID=B8H3H7_CAUCN Length = 361 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 128/357 (35%), Positives = 210/357 (58%), Gaps = 10/357 (2%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+D++D KTE P+ +L AR +G + +S ++ L L VSVI G L R L Sbjct: 1 MADDTDPESKTEEPSAKKLSDARAKGDVIKSADIPQLASLAGAVSVILLAGGWLTRDLMA 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVML----GGLV 114 L+ + +I +L G ++++++A+LA LP + V++V + G + Sbjct: 61 ALTPFIAHAGTI----DLSSGGAMIVLKQALLAALPALVLVMVVTAFAGAAAHIAQTGFL 116 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 + + ++P F KL+ + G+ R+F + LK+ +K +L G + F L H ++ L+ Sbjct: 117 LTPEKIKPDFQKLDLIKGLGRIFGPDGMVQFLKSAVKFLLTGVIAYFVLKPHVGEVRNLV 176 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 P + AM L + V+L ++ FD F+Q + ++RM+ Q++++EFKQS+ Sbjct: 177 GMDPAAMIPEAMKLSKGLLIAVILLLVATSAFDYFWQRMRFMNRMRMTLQEVKEEFKQSD 236 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDPH+KG+ RQ+Q +R+RMM VPKA V+V NPTHY+VAL+Y++ + AP VAKG Sbjct: 237 GDPHIKGKRRQIQMQRSRQRMMQAVPKATVVVMNPTHYAVALKYEQGETPAPLCVAKGVD 296 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +AL+IR + E+ VP LE PPLARALY EI ++IP + + AVA+V++++ K+ Sbjct: 297 DLALKIRAVAEEHGVPVLEDPPLARALYASVEIDEEIPVEHFEAVAKVISFILNGKK 353 >UniRef50_B1LWT8 Flagellar biosynthetic protein FlhB n=8 Tax=Methylobacterium RepID=B1LWT8_METRJ Length = 355 Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 121/344 (35%), Positives = 193/344 (56%), Gaps = 9/344 (2%) Query: 12 PTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSII 71 P+ RL++A E G + S E+ + +L + ++A L L A L H++ Sbjct: 14 PSQRRLDQAIERGDVATSTEINTFAMLGAFTLALLVAAPTIATNLLHGLKAYLANAHAL- 72 Query: 72 NDPNLILGQIILLIREAMLALLPL---ISGVVLVALISPVMLGGLVFSGKSLQPKFSKLN 128 P+ + R L L + + V+ L + ++ LVFS ++L PKFS+L+ Sbjct: 73 --PDDAAAMKAAMTRGLWLWLQAVAVPVGLAVVAGLAAGLLQHPLVFSAETLMPKFSRLS 130 Query: 129 PLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDL 188 P+ G+KR+ + + K + K VG V LW+ ++ P +M + L Sbjct: 131 PMAGVKRLLGVEALFQFGKGLAKIAAVGVVGAVMLWNDRDRLEVFARLDPAASMPAILSL 190 Query: 189 -VGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQ 247 + L A ++ + + +G D + F K+ RMS+++++ E K+SEG+P VKGR++Q++ Sbjct: 191 SLKLLAGMLCMHLAITLG-DALYARFRWRKRHRMSKEELKQEMKESEGNPEVKGRLKQLR 249 Query: 248 RAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAEN 307 A ++RMMA VP A V+V NPTHY+VAL+Y E M+AP VAKG +ALRIR + AE+ Sbjct: 250 MARVKKRMMAAVPTATVVVTNPTHYAVALRY-ETGMAAPVCVAKGVDALALRIRAVAAEH 308 Query: 308 NVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 V +E PPLARAL+ EI ++IP + Y AVAEV+ +V +L+R Sbjct: 309 GVAVIENPPLARALHATVEIDREIPAEHYRAVAEVIGFVLRLRR 352 >UniRef50_C4XT81 Flagellar biosynthetic protein FlhB n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XT81_DESMR Length = 357 Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 122/355 (34%), Positives = 197/355 (55%), Gaps = 18/355 (5%) Query: 8 KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA--GLH 65 KTE TP R KARE+G +PRS+EL L +L+ G+ + F ++ +L + G Sbjct: 7 KTEKATPKRESKAREKGSVPRSQELPKLTVLMAGLFTVRFTLGNINEQLQEVFRTFLGGR 66 Query: 66 FDHSIINDPNLILGQIILLIREAMLALLPLISGVVL--VALISPVMLGGLVFSGKSLQPK 123 D + D L + A LA++ L +V+ VA ++ + G V+ K +P Sbjct: 67 LDFTATTDDVAAL----MWSLSAKLAIMLLPLLLVMAVVAFVTQRLQVGEVWRPKIFEPD 122 Query: 124 FSKL-NPLPGIKRMF-SAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES---- 177 FS + NP+ G++R+ SAQT L K + V L + + + L +S Sbjct: 123 FSNIVNPMRGLQRLLISAQTLVNLAKQTAMAFAISLVPYLILRKRFNEFLPLFYQSVDNI 182 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + + N D+V L +L + + DV++ + + + L+M++ +++DE KQS GDP Sbjct: 183 ALFLLDNGFDMV----LYTLLPMFVIAILDVWYTRWDYAENLKMTKDEVKDEHKQSFGDP 238 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 HVK + ++ +RRM+ DVPKADV++ NPTH + AL+Y+ + AP ++AKGA +A Sbjct: 239 HVKQQQKRKMMEVMQRRMLQDVPKADVVITNPTHIACALRYNPLESPAPMLLAKGADFMA 298 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 +I++I E+ VP E PLA+ALY++ EIGQ IP LY AVA +LA + + +R+ Sbjct: 299 EKIKDIAKEHKVPIRENKPLAQALYKNVEIGQVIPEDLYQAVASILAQLDKFRRF 353 >UniRef50_Q0G102 Flagellar biosynthesis protein B n=3 Tax=Rhizobiales RepID=Q0G102_9RHIZ Length = 362 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 112/349 (32%), Positives = 189/349 (54%), Gaps = 7/349 (2%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRE---LTSLLILLVGVSV-IWFGGVSLARRLS 57 S++ KTE PT ++ E+G +P SRE L S L + + +++ G L L Sbjct: 4 SEDRSQKTEQPTEKKIRDTIEKGNLPNSREAPVLASFLAISLFIALQARESGYRLLTTLQ 63 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 L ++ D +L +L EA + L+P+ + + +++ V+ + Sbjct: 64 TTFDNPLQWELETSRDALHVLS---VLSTEAAIFLVPVAIFLCIGGILASVLQNPPQVNF 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 + ++PK S ++P G+KR+F + E KA+ K +++G V G + + M++ M Sbjct: 121 ERIKPKASNISPASGLKRIFGPRGLTEFAKAVFKFLMIGVVVGTLIVSNLGTMIQTMLAD 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 P+ +DL V + I +V D+ + + MS+Q+I+DE KQ++GDP Sbjct: 181 PVQVPELVLDLAMKLLSGVSIATIVLVAADIAMTRIHWRRDIMMSKQEIKDEHKQTDGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 VK R +Q+ R +R+RM+A VP A +++ NPTHY++AL+Y + AP VVAKG LVA Sbjct: 241 MVKQRQKQIARERSRKRMIAAVPNATLVIANPTHYAIALRYKREEGGAPMVVAKGTDLVA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 L+IRE+ E +P +E LAR++Y H I Q IP + + AVAE++ ++ Sbjct: 301 LKIREVAEEKEIPVIEDKLLARSMYDHVHIDQMIPPEFFKAVAEIIYYL 349 >UniRef50_Q1GCC9 Flagellar biosynthetic protein flhB n=3 Tax=Rhodobacteraceae RepID=Q1GCC9_SILST Length = 363 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 123/366 (33%), Positives = 193/366 (52%), Gaps = 25/366 (6%) Query: 1 MSDESDD--KTEAPTPHRLEKAREEGQIPRSREL---TSLLILLVGVSVIWFGGVSLARR 55 MSDE+DD K+ PTP +L KAR+EG +P+S +L S L LL+ + G S + Sbjct: 1 MSDENDDSDKSFEPTPEKLRKARQEGDVPKSNDLLQAASYLGLLIA---FYTAGRSSIEQ 57 Query: 56 LSGMLSAGLHFDHSIINDPN----LILGQIIL------LIREAMLALLPLISGVVLVALI 105 L +L S+I+ P+ + G I I +A+ +++ + + ++ Sbjct: 58 LGTVL-------MSMIDQPDRLAPVFFGDGIAAPVAWEFISDALTSVIAWFAVPAALVIL 110 Query: 106 SPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWH 165 + +VF+ K +QPK S+L+ + K F E K+ K +L G +L Sbjct: 111 AVFAQKAMVFAPKRIQPKLSRLSIIKNAKNKFGRSGLFEFAKSFFKLLLYSITLGVYLSW 170 Query: 166 HWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQD 225 P+M+ + SP T + + L +L ++ + + D FQ ++K MSR+D Sbjct: 171 RLPEMIASVGTSPFTVVPFLVQLAMEFLILTLIIALAIGLVDAPFQQAEFIRKNMMSRKD 230 Query: 226 IRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSA 285 + DE K SEGDPH KG+ +Q R +++ A VP+ADV++ NPTHY+VAL++ SA Sbjct: 231 VMDEMKNSEGDPHTKGQRKQKGRQIVSKQIAAAVPEADVVIVNPTHYAVALKWSRVSGSA 290 Query: 286 PKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAW 345 P+ VAKG VA IREI EN VP PP ARALY E+G++I + YA VA + + Sbjct: 291 PECVAKGVDGVAAMIREIAQENGVPLHSDPPTARALYATVEVGEEIAEEHYAPVAAAIRF 350 Query: 346 VWQLKR 351 ++++ Sbjct: 351 AEEMRK 356 >UniRef50_Q2SH55 Type III secretory pathway, component EscU n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SH55_HAHCH Length = 345 Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 115/352 (32%), Positives = 195/352 (55%), Gaps = 18/352 (5%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PTP +L AR++GQ+ S+EL S +++ +++ G SL L ++ F Sbjct: 3 EKTEKPTPKKLLDARKKGQVAHSKELVSTAMMIAMYGLLFASGYSLVEALQSLIDLPARF 62 Query: 67 DHSIINDPNLILGQIIL--LIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 P Q +L + +++ LLP I V++ A++S V G +F+ +S++ Sbjct: 63 ----YGQPFGEALQAVLNGVFEKSLDILLPFILLVIVTAVVSNVGHVGPLFAMESVKFDL 118 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 K++P+ G+K++FS ++ ELLK+I+K + + + + + + + +L P Sbjct: 119 KKIDPVEGVKKLFSVRSLMELLKSIVKILFLSILIYWVITANLNDIRKL----PHCGSDC 174 Query: 185 AMDLVGLCALLVVLGVIPMVGF------DVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 M +G L++ L ++ MV F D +Q H K+LRM++ +++ E+K +EG+P Sbjct: 175 IMPFIG--HLMLQLAMVSMVAFVIVAVLDFLYQKHEHQKQLRMTKDEVKREYKDAEGNPE 232 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 V G+ +Q+ R M++ + KA VIV NPTH ++ + YD +K S P V+ K A Sbjct: 233 VIGQRKQIHREMLDGGMISQIKKASVIVTNPTHIAIGIYYDGDKRSLPTVILKAKNTTAQ 292 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 R+++I A+ VP +E PLARALY AE+ IP +L VAEVL WV L+ Sbjct: 293 RVKKIAAKEGVPIMENIPLARALYAQAELENYIPSELIEPVAEVLKWVAGLE 344 >UniRef50_C5CXN4 Type III secretion exporter n=1 Tax=Variovorax paradoxus S110 RepID=C5CXN4_VARPS Length = 365 Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 113/365 (30%), Positives = 214/365 (58%), Gaps = 15/365 (4%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+++ D+ EA TP++L++ARE GQ +S ++ + L+ GV+V++ L R G + Sbjct: 1 MAEQDLDRNEAATPYKLQRARERGQAAKSTDVVAALVF--GVAVVY-----LTWRGFGAV 53 Query: 61 SAGLHFDHSII-----NDPNLI-LGQII-LLIREAMLALLPLISGVVLVALISPVMLGGL 113 ++ FD +++ DP+ + L +I +R A+ P + ++L A++ +M G Sbjct: 54 ASQFRFDQALLIHAGRMDPSGVGLWPLIERALRSALTLAAPFFAAIMLAAIVGNMMQTGP 113 Query: 114 VFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL 173 + S + ++ F+++NP+ G+K++FS + + +AI+K L+G V L Q L Sbjct: 114 ILSFEPVKMDFTRINPVNGLKKLFSMRVLFDTARAIVKLALLGLVAFLALEALASQFYAL 173 Query: 174 MAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQS 233 + SP+ + +D + L + L + + D+ + KK+RMS+++++DE K Sbjct: 174 ASLSPVGYLRTLLDDLASVGLKMALVLTLIALLDLMYTRREFAKKMRMSQRELKDEAKHR 233 Query: 234 EGDPHVKGRIRQMQRAAARRRM-MADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 EGDP ++ R+R+++R +R + + AD+++ NPTH +VAL+Y+ +M++P+++AKG Sbjct: 234 EGDPRIRARLRELRRETLKRSLALRQTRNADMLITNPTHLAVALKYEHGRMASPQLLAKG 293 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 AG +A +REI A + +P ++ PPLAR LY+ + +P +LYA VA ++ WV+ ++ Sbjct: 294 AGHMAAAMREIAARHRIPVVQNPPLARRLYKELPVDHSVPPELYAQVARIIVWVFAMREQ 353 Query: 353 RLAGG 357 RL G Sbjct: 354 RLGRG 358 >UniRef50_UPI0001744A09 Type III secretory pathway, component EscU n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744A09 Length = 347 Score = 187 bits (475), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 117/356 (32%), Positives = 203/356 (57%), Gaps = 20/356 (5%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSREL-TSLLIL--LVGVSVIWFGGVSLARRLSGMLSAG 63 +K E PTP +L AR++GQ+ +S+++ T+ L + V + ++W V A+ L +L Sbjct: 3 EKNEPPTPKKLRDARKKGQVAKSQDVGTAALTIASFVTIGIMWPSMVEQAKEL--ILLPV 60 Query: 64 LHFDHSIINDPNLILGQIILLI---REAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 ++D G + L++ R+ +L LP++ V++V L + G + + + L Sbjct: 61 QYYDKPFQQ------GSMELMLAIGRKVLLMSLPILMVVMVVGLAAGFGQIGFMLTFEPL 114 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL---MAES 177 +P+ KLNP+ K++FS ++ ELLK+ +K ++G + + + RL ES Sbjct: 115 KPELKKLNPMDKAKQIFSMKSLVELLKSTIKVGVIGIIIYYVTKASLDPLTRLPYGGEES 174 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 +TA+ ++ + VV+ I + D FFQ + H+K+L+MS+ +++ E+K+SEG+P Sbjct: 175 VLTAL---QPMIKALTMNVVMAYIIIAAADFFFQKYQHIKQLKMSKDEVKREYKESEGNP 231 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +KG+ +Q+ + AA+ M KA V+V NPTH ++A+ YDEN P+V+AKG VA Sbjct: 232 EIKGKRKQLAQEAAQSDTMGRTRKASVVVTNPTHLAIAIYYDENDDKMPRVLAKGEDHVA 291 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 R+ E+ E +P ++ PLARALY + +I + +P L +AEVL WV + K R Sbjct: 292 RRMVEVAREEGIPVMQHVPLARALYENVDIDRFVPSDLIEPMAEVLRWVQEWKELR 347 >UniRef50_A3SFT1 Flagella-associated protein n=2 Tax=Sulfitobacter RepID=A3SFT1_9RHOB Length = 375 Score = 187 bits (475), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 122/364 (33%), Positives = 208/364 (57%), Gaps = 25/364 (6%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 + +S +KT PT +L+ AR++G +P S+E +++++ V+++ + L + ++ Sbjct: 4 NSDSTEKTLEPTEKKLKDARKKGDVPSSKETGNMVVV---VAMLGIAALVLPYQAPQIVV 60 Query: 62 A-GLHFDHS-----IINDPNLI-LGQIIL-LIREAMLALLPLISGVVLVALISPVMLGGL 113 A + DHS +P +I LGQI+ + A+LP+ + L I V+ G Sbjct: 61 ALSVLLDHSPNLMVATGEPGVIRLGQIMSEFFYMIVWAVLPIFGVLFLGGAIGAVIQGET 120 Query: 114 VFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL 173 V + + ++PK SKL+PL G+KR+FSA E K+I+K + +G G +W + R+ Sbjct: 121 VVAAERIKPKLSKLSPLEGLKRLFSANALVEFAKSIVKVLAIG---GLAVWFTNEAVRRI 177 Query: 174 MAES-------PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDI 226 S P A+ L+ A+L+V P+ D+ ++ F +K RMS++DI Sbjct: 178 WTSSGFIPEHLPGYLTAAAVKLLIAAAILLV----PIAIADILWRRFDWRRKQRMSQKDI 233 Query: 227 RDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAP 286 +DE K+SEG P ++ + + +R +++R + VP ADVI+ NPTHYS+AL+YD + AP Sbjct: 234 KDEHKESEGSPEIRQKRARRRRELSQQRTITAVPLADVILTNPTHYSIALKYDPAQDMAP 293 Query: 287 KVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 +AKGA +A RIRE+ AE+++P +E PL R LY ++ Q IP + VAE++++V Sbjct: 294 VCIAKGADHLARRIREVAAEHDIPMIENKPLTRMLYDEIDVDQVIPVAHWEIVAEIISFV 353 Query: 347 WQLK 350 + L+ Sbjct: 354 FDLR 357 >UniRef50_Q4JMS7 Predicted flagellar biosynthetic protein n=1 Tax=uncultured bacterium BAC17H8 RepID=Q4JMS7_9BACT Length = 385 Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 132/369 (35%), Positives = 212/369 (57%), Gaps = 34/369 (9%) Query: 1 MSDESDD---KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M++E+ D KTE PT RL+KA EEG+I S+E+ L G+ V++ G LS Sbjct: 1 MAEENQDGQEKTEEPTQRRLQKAAEEGRILTSKEVMVFTTLAAGL-VLFMG-------LS 52 Query: 58 GMLSAGLHFDHSIIN-DPNLILGQIILL-IREA--MLALLPLISG--VVLVALISPVMLG 111 +++GL S+ D L + L+ +R A ++ L L+ G +++V +++ +G Sbjct: 53 PFVASGLDAWGSLFRIDSGFNLDTLGLVKVRYAFWLVILATLVVGMPLIVVIILTQAAVG 112 Query: 112 GLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMM 171 GL F+ +++ K ++++P+ G+KR+FS + EL K++LK L+ + ++H PQ++ Sbjct: 113 GLNFAAQAMNFKGNRIDPIAGLKRIFSVKGLVELAKSVLKVGLLFGIGALVIYHQLPQLV 172 Query: 172 RLMAESPITAMGNAMD----LVG--LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQD 225 L + S + A LVG L ALLV+ + D +Q +H + LRM+ ++ Sbjct: 173 FLSSSSLSQGVNRAAQAFPFLVGGLLIALLVIAAI------DYAWQKHTHTQSLRMTLKE 226 Query: 226 IRDEFKQSEGDPHVKGRIRQMQRAAA-----RRRMMADVPKADVIVNNPTHYSVALQYDE 280 ++DE KQ+EG P V+ +IR+MQ A +R + +V A +V NPTH++VAL+Y Sbjct: 227 VKDESKQTEGSPEVRAKIRRMQYQQAQESSRQREALGNVGDATTVVTNPTHFAVALKYAA 286 Query: 281 NKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVA 340 + AP V+A G G +A++I E E V TL P LARALY +EIG +I LY AVA Sbjct: 287 GQEGAPVVLAMGRGQMAMQIIERAKEARVRTLRIPMLARALYFTSEIGGEITEGLYNAVA 346 Query: 341 EVLAWVWQL 349 VLA+V++L Sbjct: 347 VVLAYVFRL 355 >UniRef50_A4SKN0 Flagellar biosynthetic protein FlhB n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SKN0_AERS4 Length = 281 Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 99/186 (53%), Positives = 137/186 (73%), Gaps = 6/186 (3%) Query: 189 VGLCALLVVL--GVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 +GL +L++L +IP+V DV FQ ++H ++L+M++Q+++DEFK SEG P VKGRIRQ+ Sbjct: 92 LGLLWMLIILCCALIPIVAIDVPFQTWNHTRQLKMTKQEVKDEFKDSEGKPEVKGRIRQL 151 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENK-MSAPKVVAKGAGLVALRIREIGA 305 Q A RRMM DVPKADVI+ NPTHYSVAL+YD K +APKVVAKG +A++IREI Sbjct: 152 QMQMAMRRMMGDVPKADVIITNPTHYSVALKYDIAKPGAAPKVVAKGTDEIAMKIREIAR 211 Query: 306 ENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQP-- 363 E +P + +P L RA++ EIG +IP L+AAVA+VLA+++QLK++R G+RP P Sbjct: 212 EYEIPIMPSPALTRAIFHSTEIGHEIPEGLFAAVAQVLAYIYQLKKFRRGSGRRP-NPIA 270 Query: 364 THLPVP 369 LP+P Sbjct: 271 KDLPIP 276 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 58/109 (53%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D ++TE PT RL++ARE+GQI RS+EL + LL V + SLA + +L Sbjct: 1 MADTDQERTEQPTGKRLQQAREKGQIARSKELGTASALLAAVFGLLMVKESLASAMVKIL 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVM 109 + G D DPN + + L+RE + L L ++L + P++ Sbjct: 61 TIGFTLDRDQAFDPNAMGAMLPALLRELVYPLGLLWMLIILCCALIPIV 109 >UniRef50_C4Z5H8 Flagellar biosynthetic protein FlhB n=5 Tax=Bacteria RepID=C4Z5H8_EUBE2 Length = 372 Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 125/360 (34%), Positives = 205/360 (56%), Gaps = 30/360 (8%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSREL---TSLLILLVGVSVIWFGGVSLA-----RRLSG 58 +KTE T +L+ R+EGQ+ +S+EL SL+ L + + I+ G + + + G Sbjct: 21 EKTEPATSKKLDDVRKEGQVAKSKELITAVSLMTLFIIIK-IYVGNIGTKLIDSFKTIYG 79 Query: 59 MLSAGLHFDHS----IINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLV 114 ++ G D S +N I Q +I A++ +L V++A++ + + Sbjct: 80 LM--GKVIDDSSKGVTVNMAASIASQAFTIILNAVIPIL---IIAVIIAILGNALQQRWM 134 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 + K L PK SK+NPL G KR+FS + ELLKAI + S+ +++ + M ++ Sbjct: 135 VTAKPLAPKASKINPLNGFKRLFSVRQLFELLKAIA----MMSIIVIMVYNCVKKNMNIL 190 Query: 175 AESPITAMGNAMDLVGLCALLVVLG-----VIPMVGF-DVFFQIFSHLKKLRMSRQDIRD 228 + A+ VG +++ LG V +VGF D+ +Q M++Q+++D Sbjct: 191 LTFYDVTLYTALATVG--NIIINLGIQISAVFLVVGFVDLLYQRHKFKNDNMMTKQEVKD 248 Query: 229 EFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKV 288 EFK +EGDP VKG+IR+ + +RRRMM +P+ADV++ NPTH++VAL+Y+ ++ AP V Sbjct: 249 EFKNAEGDPQVKGQIRRKMQEISRRRMMQQLPEADVVITNPTHFAVALKYEPDEGKAPVV 308 Query: 289 VAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 +AKGA +A +I++ E N+ +E PLAR LY + +IG +IP +LY AVAE+LA V + Sbjct: 309 IAKGADYLAFQIKDRAKEYNIAIVENKPLARILYHNVDIGTEIPPELYYAVAEILASVLR 368 >UniRef50_D0DA90 Flagellar biosynthetic protein FlhB n=1 Tax=Citreicella sp. SE45 RepID=D0DA90_9RHOB Length = 365 Score = 184 bits (467), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 128/378 (33%), Positives = 192/378 (50%), Gaps = 56/378 (14%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 D+ DKT P+P +LE+AR +G+IPRS ++ + L GML+ Sbjct: 4 DDGGDKTHEPSPRKLEEARRKGEIPRSPDMLTAACYL------------------GMLAT 45 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLALLPLI--------SGVVLVALISPVM--LG- 111 GL + + G +L + E L+PL SG +L+A I+PV+ LG Sbjct: 46 GLALGGGSV----MGFGNALLPLIEQPDRLVPLFFNDMASAPSGGILLAAITPVLPWLGV 101 Query: 112 -------------GLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSV 158 GLVF+ L K S+L+P+ K F + E +K++ K +L + Sbjct: 102 PALAVLLTLFATRGLVFTASKLSLKASRLSPVENAKNKFGRRGLFEFVKSLAKLVLYSVL 161 Query: 159 TGFFLWHHWPQMM---RLMAESPITAMGNAM-DLVGLCALLVV-LGVIPMVGFDVFFQIF 213 GFFL ++ R A M + M L+G+ A++ V LG I D +Q Sbjct: 162 LGFFLSTRLDEIAGIGRSSAHEATALMADLMLRLLGIAAMIAVGLGTI-----DYLWQRA 216 Query: 214 SHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYS 273 H+++ RMS++++RDE+K++EGDP K R + A RMM DVP ADV++ NPTHY+ Sbjct: 217 EHMRRNRMSQKELRDEYKEAEGDPMFKQHRRARAQEIAMNRMMVDVPDADVVIVNPTHYA 276 Query: 274 VALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPG 333 VAL++ AP VAKG +A RIREI A++ VP PP ARA++ EIG QI Sbjct: 277 VALKWSRQPGEAPVCVAKGVDEIARRIREIAADSGVPIHSDPPTARAIHATTEIGDQIAA 336 Query: 334 QLYAAVAEVLAWVWQLKR 351 + Y VA + + +++ Sbjct: 337 EHYRPVAAAIRFAEDMRK 354 >UniRef50_D2NZE2 Flagellar biosynthesis protein FlhB n=21 Tax=Listeria RepID=D2NZE2_LISMO Length = 348 Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 111/341 (32%), Positives = 182/341 (53%), Gaps = 8/341 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 D+KTE TP R++KAR EG + +S+EL + LL+ +++F G + A L Sbjct: 3 KDNKTEKATPRRIKKARNEGNVAKSKELNNAFSLLIVAGLLYFFGEMFIKNTIQAFVALL 62 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + N + L + E L+P++ VV+ L++ + G++FS K+++P+F Sbjct: 63 KQPPKLANMESYSL----FYLMEFGKVLMPIMVMVVIFGLMNYGVQVGILFSAKAVKPQF 118 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 +LNP KR+FS + E++KA+L L+ V H ++ ++ + ++G Sbjct: 119 KRLNPANYFKRVFSVKGIVEVVKALLLITLLSYVAYIGFRDHLDTLISYTGQNWLYSLGQ 178 Query: 185 AMDLVG--LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 L AL +V+ VI ++ D F+Q + + K LRMS+Q+I+DE K SEG P VK R Sbjct: 179 IFALFKNEFLALFLVIAVIGLL--DFFYQRYDYKKGLRMSKQEIKDEMKDSEGRPEVKQR 236 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 R + R + + + A +VNNPTH SV ++YD+ K APK++ KG +AL IR+ Sbjct: 237 QRSIARGLLQGSITKKMADATFVVNNPTHISVVMRYDKTKDHAPKLLVKGEDELALFIRQ 296 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVL 343 + + VP + LAR++Y + I LY V EV+ Sbjct: 297 VADTDGVPMITNRQLARSIYYTTNPDEYIQEDLYKDVIEVM 337 >UniRef50_A9HH78 Putative flagellar biosynthetic protein flhB n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HH78_GLUDA Length = 358 Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 128/355 (36%), Positives = 194/355 (54%), Gaps = 23/355 (6%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL-H 65 +K++ PT RLE AREEG + +SREL L IL + V ARR + + H Sbjct: 9 EKSQDPTGKRLETAREEGNVAQSRELLMLAILGGFLLVFTMATADSARRFVAHVGGTMEH 68 Query: 66 FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFS 125 FD SI D I + E +L PL+ +V + ++ G ++ +++ P + Sbjct: 69 FD-SIPTDMTSIYRIAVQTALEGVLLAAPLVFTGFVVTIACGMLQTGFLYRPQAILPDIT 127 Query: 126 KLNPLPGIKRMFSAQTGAELLKAILKTILVGSV---TGFFLWHHWPQ-----MMRLMAE- 176 +L+P+ G++RMF E+LK++ K ++ G V H P+ M+RL++E Sbjct: 128 RLSPMRGLQRMFGMTNVVEMLKSLTKFVVFGVVLYAVAKGTLHVAPEAERWSMLRLVSEL 187 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 S A + L+ C + ++ D + + + LRMS QDI+DEF+Q+EGD Sbjct: 188 SSWFAYAVLVVLLVQCVIAIL---------DDLWTRYHRIVGLRMSFQDIKDEFRQTEGD 238 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P VKGR++QM+R ARRRM+ V A V++ NPTHY+VAL Y+ SAPK+VA G + Sbjct: 239 PKVKGRLKQMRRRRARRRMLQAVKTATVVITNPTHYAVALSYESGADSAPKIVASGTDEL 298 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHA-EIGQQIPGQLYAAVAEVLAWVWQLK 350 A RIR + VP + PPLARAL HA + +IP + + VA ++A+V +LK Sbjct: 299 AARIRHAAEDAKVPVVANPPLARAL--HALPLDSEIPSEYFQPVAAIIAYVMKLK 351 >UniRef50_Q9ZL73 Flagellar biosynthetic protein flhB n=16 Tax=Helicobacteraceae RepID=FLHB_HELPJ Length = 358 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 121/370 (32%), Positives = 207/370 (55%), Gaps = 26/370 (7%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVI------WFGGVSLARRLSG 58 ++KTE P+ +++KAREEG +P+S E+ L LL G+ I W G S R Sbjct: 3 EEEKTELPSAKKIQKAREEGNVPKSMEVVGFLGLLAGLMSIFVFFIWWVDGFSEMYR-HV 61 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + L F + + + Q L ++ L LLP++ +++VA +S V+ G +F+ K Sbjct: 62 LKDFSLDFSKESVQE---LFNQ---LAKDTFLLLLPVLIILMVVAFLSNVLQFGWLFAPK 115 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKT--ILVGSVTGFFLWHHWPQMMRLMAE 176 ++PKFSK+NP+ G+K +FS + ++L L T + + GFF++ + + L Sbjct: 116 VIEPKFSKINPINGVKNLFSLK---KILDGSLITLKVFLAFFLGFFIFSLF--LGELNHA 170 Query: 177 SPITAMGNAMDLVGLCALLV---VLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQS 233 + + G + L+ + + D+ + + L+M++Q+++DE+KQ Sbjct: 171 ALLNLQGQLLWFKSKALWLISSLLFLFFVLAFVDLIIKRRQYTNSLKMTKQEVKDEYKQQ 230 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EG+P +K +IRQM A +MM ++PK++V+V NPTHY+VAL++DE + P VVAKG Sbjct: 231 EGNPEIKAKIRQMMVKNATNKMMQEIPKSNVVVTNPTHYAVALKFDE-EHPVPVVVAKGT 289 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +A+RI+ I E+++ +E LAR LYR ++ IP +L+ AVA V A V +L++ R Sbjct: 290 DYLAIRIKGIAREHDIEIIENKTLARELYRDVKLNATIPEELFEAVAIVFAQVAKLEQER 349 Query: 354 LAGGQRPVQP 363 Q+ ++P Sbjct: 350 --QKQKIIKP 357 >UniRef50_Q2P9D1 HrcU protein n=12 Tax=Xanthomonas RepID=Q2P9D1_XANOM Length = 359 Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 116/347 (33%), Positives = 182/347 (52%), Gaps = 2/347 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S++KTE PT +L AR++G++P S ++T+ +L + V+ G + + G Sbjct: 2 SEEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFVDHMRALTRIGF 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F + D I + + + +L +LP ++ ++ L+ GL S K + PKF Sbjct: 62 DFSENT-RDATAINRALAHIGIQGLLLMLPFLAACLVAGLVGGAFQTGLNASLKPVSPKF 120 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 LNP G+K++FS ++ LLK I+K IL+G V + P ++ L E+P+ Sbjct: 121 DSLNPANGVKKLFSLRSLINLLKLIIKAILIGVVMWVGIRTLMPMIIGLAYETPLDISQI 180 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 A + + L VL I + D Q + ++ RMS+ + + E+K+SEGDP +KG+ + Sbjct: 181 AWRTLSMLFALGVLLFILVGAADWSVQHWLFIRDKRMSKDEQKREYKESEGDPEIKGKRK 240 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + + V KA V+V NPTHY+VAL Y+ + P+VVAKG AL +R Sbjct: 241 EFAKELVFGDPRQRVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFA 300 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +P + PPLARALY+ E+G IP QL+ VA VL WV L R Sbjct: 301 HNQGIPIVANPPLARALYQ-VELGDAIPEQLFETVAVVLRWVDGLGR 346 >UniRef50_C6XFL0 Flagellar biosynthesis protein FlhB n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFL0_LIBAP Length = 354 Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 108/356 (30%), Positives = 198/356 (55%), Gaps = 13/356 (3%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRE---LTSLLILLVGVSVIWFGGV-SLARRLS 57 +D D+KTEAP+ ++E A EG P SRE +S+L L+ + + G+ S+ L Sbjct: 4 NDAPDNKTEAPSSKKIEDALNEGNAPISREASLFSSILACLIYLLFFFSPGIYSVTSDLH 63 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVAL--ISPVMLGGL-V 114 +L++ + D + I + LL ++ A +I G++L + I ++ + V Sbjct: 64 VLLASA---TQRKLEDISHI---VFLLTHLSLSASRLVIPGLLLFMMFGIGSYLIQRIPV 117 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 + ++P F +++ GIKR++S +K+ +K ILVG++ L ++ M+ + Sbjct: 118 LNLNHVKPSFKRVSLREGIKRIYSINNLVNFMKSFVKIILVGTIITISLTENYFTMLDFI 177 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 + +P + + +A V ++++L + + D+ + KL+MS+Q+I+DE KQS Sbjct: 178 SANPHSILYHAFFTVRKVLIMILLFIATLTVLDIGWSYHQWYSKLKMSKQEIKDEIKQSY 237 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 G+P +K R + + R+ R +MM +A +I+ NPTHY++AL+Y + + AP +VAKG Sbjct: 238 GNPIIKNRQKSIARSRIRHKMMEATSRATIIITNPTHYALALRYIQTENDAPVLVAKGQN 297 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 L+A ++R+I E+N+P E P LAR+L++ I IP Y AVA+++ ++ K Sbjct: 298 LIAKKMRKIAYEHNIPIFEEPSLARSLFKQVPINSAIPPVFYKAVAQLIYKIYHKK 353 >UniRef50_Q2RZE8 Flagellar biosynthetic protein flhB n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZE8_SALRD Length = 353 Score = 180 bits (456), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 119/348 (34%), Positives = 203/348 (58%), Gaps = 5/348 (1%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 E+ +K PTP RLEKARE+G + R+ E S+ +LL ++V GG S + L M +A Sbjct: 3 ETQEKQYDPTPRRLEKAREKGNVLRATEPVSVGLLLTAMAVFSVGGASAFQSLQDM-AAR 61 Query: 64 LHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVML-GGLVFSGKSLQP 122 + + ++ L +++ I + +L + V++VA + M+ G S +QP Sbjct: 62 IFLRSARMSLTPASLQRLVAEIGAQVAGMLAPLFIVLIVAAVGLNMVQSGWNVSFTPIQP 121 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 + S++NPL G+K++FS++ K +LK +VG + F + P+M+++ P+ A+ Sbjct: 122 QLSRVNPLEGLKQIFSSKGAFGFAKTLLKIGVVGPIAYFAMRPLIPEMVQVYT-LPLPAL 180 Query: 183 GN-AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 N A D V++G++ + D F+ + + + L+MS++++ DE K++EGDP + Sbjct: 181 LNQAADWFFALMWRVLMGLVVIAALDYAFERWKYYEDLKMSKKEMEDEQKETEGDPEFEE 240 Query: 242 RIRQMQRAAARR-RMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 + R+ + A + RM V K+D +V NPTHY++AL+YD ++ AP+V+ KG ALRI Sbjct: 241 KRREKAKELAEQPRMDHAVMKSDAVVTNPTHYAIALRYDPDEAPAPRVLLKGVRKRALRI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 +E+ AE +VPT E LA ALY + ++IP +LY AVA +LA V++ Sbjct: 301 KELAAEFDVPTFENRSLAHALYENVPEEEEIPEELYPAVAAILAEVYE 348 >UniRef50_C3XFW9 Flagellar biosynthesis protein FlhB n=3 Tax=Helicobacter RepID=C3XFW9_9HELI Length = 372 Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 117/359 (32%), Positives = 205/359 (57%), Gaps = 21/359 (5%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 ++KT AP+ +++KAREEG + +S +L L+ L+VG+ +++ + G+ + Sbjct: 3 EEEKTHAPSQRKIQKAREEGSVAKSPDLVGLVGLVVGLMLLFIIFPFWVKIFKGLY---V 59 Query: 65 HFDHSIINDPNL--ILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 + D N+ I + +++ A L +P +++ +I V G + S K ++P Sbjct: 60 ECTKLFLVDFNMHTIFAITLTILKVAALCAMPFFFALMVAGIIGNVAQFGFLLSFKIIKP 119 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKT--ILVGSVTGFFLWHHWPQMMRLMAESPIT 180 K K+NP+ G K +FS + +LL + T + + GFF++ + + ++ SP+ Sbjct: 120 KVDKINPIKGAKNLFSLK---KLLDGFIITLKVFIAFAVGFFIFVGFLDEVANISMSPLK 176 Query: 181 A-----MGNAMDLVG-LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 A+ L+G L L +V+G++ D + + ++K LRMS+Q+++DEFKQ E Sbjct: 177 EQLTWFYQKALILIGALLFLFLVMGIL-----DFLIKRYQYIKSLRMSKQELKDEFKQQE 231 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 G+ VK +IRQ+ A +MM+ +P A+V+V NPTHY+VAL+++ SAP VVAKG Sbjct: 232 GNQEVKAKIRQIMMKNAMNKMMSAIPSANVVVTNPTHYAVALRFNSETESAPVVVAKGID 291 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +A+RI+ I E+ + +E PPLAR LYR ++ + IPG+++ AV E+ V +L+ R Sbjct: 292 HLAVRIKGIAREHEILIIENPPLARELYRLVDVDRMIPGEMFEAVVELFQQVAKLEAER 350 >UniRef50_A1UTV9 Flagellar biosynthetic protein FlhB n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UTV9_BARBK Length = 356 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 122/351 (34%), Positives = 193/351 (54%), Gaps = 6/351 (1%) Query: 1 MSDESDDK---TEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 MSDE DK TE PT H++ KA E+G +P SREL L L+ + F LS Sbjct: 1 MSDEKPDKESQTEEPTEHKIHKAEEKGNLPFSRELPILASLMSFSLITIFVAFPAMSNLS 60 Query: 58 GMLSAGLHFDHSI-INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFS 116 L+ L S IN + I L+ LAL L+ + L+++ + + Sbjct: 61 RFLTEWLERPESWHINTAEDVKHLIYLVGGNLGLALAALLIIIPLISIAASAIQNAPRIV 120 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMR-LMA 175 + + PK+S+++P G R+F E LK+++K I V + + + + L+ Sbjct: 121 TERISPKWSRISPANGFGRIFGKAGFIEFLKSLVKLIGVSIIVYIMFFKNNTIFINALLT 180 Query: 176 ESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 ++P LV L +L ++ V + GFD+ + F ++LRM++Q+++DE+K EG Sbjct: 181 DAPALPEYIRQKLVDL-SLSFIVAVAIIAGFDLAWSRFYWRQQLRMTKQEVKDEYKNLEG 239 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 +P VK R+R + R RR+M+A+VP A +IV NPTH+SVAL+Y AP V+AKG + Sbjct: 240 NPMVKSRMRSLARDRIRRKMIANVPTATLIVTNPTHFSVALRYKPPLDHAPVVIAKGQDI 299 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 +AL IREI ++++P +E PLARALY+ E+ Q IP + Y VA ++ ++ Sbjct: 300 LALHIREIATKHDIPIIEDQPLARALYKQVEVDQTIPPEFYEGVAALIRFI 350 >UniRef50_B1ZR29 Type III secretion exporter n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZR29_OPITP Length = 367 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 125/362 (34%), Positives = 193/362 (53%), Gaps = 26/362 (7%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 + D KTE P+ +L +A + GQ RS EL L +L+ ++ + F V A R +A Sbjct: 5 DQDQKTEQPSEKKLSEAMDRGQFARSPELAVLFLLVAVLAALSFS-VREASREVATYAAS 63 Query: 64 LHFDHSIINDPNLILGQIILLIREAML----ALLPLISGVVLVALISPVMLGGLVFSGKS 119 L S + I EAML AL PL+ V+ AL++ + G + ++ Sbjct: 64 LF---SRFGSMKVEHDTIRAYFGEAMLTSGTALAPLLLACVVAALLAGGVQSGFRLTPEA 120 Query: 120 LQPKFSKLNPLPGIKRMFS----AQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 K +LNP+ G KR+F+ + G +LLK LV +L MM + Sbjct: 121 FGFKPERLNPVEGFKRVFNKSALVRAGVDLLK------LVALGAALYLGARG-LMMDPLF 173 Query: 176 ESPITA--MGNAMD---LVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEF 230 +P+ A +G + V L L++ LGVI + + ++ F + L M+RQ+++DE Sbjct: 174 SAPVEAAYLGQFLTDATYVFLSRLILALGVITAISYS--YEKFKTHRDLMMTRQELKDEH 231 Query: 231 KQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVA 290 K EG K +R+M R +R+MM+ VP ADV+V NPTH++VAL+Y+ K +AP V+A Sbjct: 232 KNQEGSSQAKMAMRRMARRLTQRQMMSAVPTADVVVTNPTHFAVALKYERGKDAAPVVLA 291 Query: 291 KGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 KG A RI+ I AE+ VP +E P+AR L+ ++G+ IP +LY AVA +LA V++ Sbjct: 292 KGENRFAQRIKAIAAEHGVPMVENKPVARLLFSMGKVGEAIPPELYQAVASILAVVYRTH 351 Query: 351 RW 352 R+ Sbjct: 352 RY 353 >UniRef50_C7R0I2 Type III secretion exporter n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R0I2_JONDD Length = 380 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 124/371 (33%), Positives = 208/371 (56%), Gaps = 10/371 (2%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 D+S ++TE TP R++ R++G + +S++L++ + G +V+ F ++ + + +L Sbjct: 3 DDQSQERTEEATPKRMKDVRKDGSLQKSQDLSAWAGIGAGTAVLPFVFGNVEKHIEDVL- 61 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVM---LGGLVFSGK 118 +I + P+ +L ++ ++ +A+ +LP ++ ++ V I+ ++ +GG + K Sbjct: 62 ---MNISTIASTPDPLL--VVPMLGDALAGILPALAPLLAVVFIAAILANGVGGYYIATK 116 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L+P F + N + G+K+ F Q + +KA+LKT+++G+V + P + + A + Sbjct: 117 KLKPTFKQFNLIKGMKQKFGMQALWQGVKALLKTVVIGAVLYLLIQGMIPVIQQSGALTM 176 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 +G A + V I + DV + + KK +M++++I+DE K +EGDP Sbjct: 177 RAVLGYASEKFMQLMWTAVAAGIALAILDVVVVMKRNRKKTKMTKKEIKDENKNTEGDPL 236 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +KG IR Q A +R RM+A V ADV+V NPTH +VAL Y + APK+VAKG LVA Sbjct: 237 LKGAIRSRQLAMSRNRMIASVADADVVVVNPTHVAVALTYVAGE-GAPKLVAKGKNLVAQ 295 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 RIRE ++VP + PLARAL H EIG IP L+ AVA+VLA+V L++ A Sbjct: 296 RIREEAEAHDVPLVRDIPLARALNAHCEIGHPIPPALFTAVAQVLAFVMLLRQRGAAMAT 355 Query: 359 RPVQPTHLPVP 369 P VP Sbjct: 356 VKTMPAPTDVP 366 >UniRef50_B3PPK9 Flagellar biosynthesis transmembrane protein n=15 Tax=Proteobacteria RepID=B3PPK9_RHIE6 Length = 373 Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 114/359 (31%), Positives = 185/359 (51%), Gaps = 25/359 (6%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 D+ D KTEAPT + A E+G +P SREL+ +L + F R+S L Sbjct: 17 DDDKDSKTEAPTAKKQTDAAEKGNVPFSRELSIFATILATFIYLVFFLPENVGRMSETL- 75 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS-- 119 I P+ Q + +LAL + G AL++P + +VF S Sbjct: 76 ------RDIFEQPD----QWKIETGPDILALFVRL-GWASAALLAPAFILLMVFGIASSI 124 Query: 120 -----------LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWP 168 ++P+ S+++P+ G R+FS E K++ K ++VG + F L + Sbjct: 125 FQNLPTPVLERIRPQASRISPVKGWSRLFSLPGLIEFGKSLFKVVVVGVILFFVLRSEYF 184 Query: 169 QMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRD 228 + M P T + M + +++++ + D F+ +L+M+R ++++ Sbjct: 185 GSIDAMFSDPQTILVRMMTAMRKIIIVMLIATAIVAIADFFWTRHHWFTELKMTRHEVKE 244 Query: 229 EFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKV 288 E KQ++GDP VK R R + R ARRRM+A+V +A +++ NPTHY+VAL+Y + AP V Sbjct: 245 ENKQAQGDPFVKSRQRSLMRDRARRRMIANVHRATLVIANPTHYAVALRYAREENDAPVV 304 Query: 289 VAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW 347 +AKG L+AL+IREI +N +P E PPLAR+++ + IP Y AVAE++ V+ Sbjct: 305 LAKGQDLIALKIREIAEQNGIPVFEDPPLARSMFAQVSVDSVIPSVFYKAVAELIHRVY 363 >UniRef50_B7QTP8 Type III secretion exporter n=1 Tax=Ruegeria sp. R11 RepID=B7QTP8_9RHOB Length = 360 Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 115/359 (32%), Positives = 185/359 (51%), Gaps = 18/359 (5%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 D+ DK+ PTP ++ KARE+G +P+S +L+ L + V++ G + R + ++ + Sbjct: 4 DDDSDKSYEPTPEKIRKAREKGDVPKSTDLSVAAAYLGLIIVVYTSGEDMVRDMGSLMMS 63 Query: 63 GL-----HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 L H + ++ +G ++ + AM + + + V+++L+ LVF+ Sbjct: 64 FLDQPDRHAELFFSDNGTPPVGGLLKSVASAMAPMFIIPAAAVILSLVGQ---RALVFAP 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 L+PK S+++ + K F E K+ +K IL G +L + P M+ A Sbjct: 121 SKLEPKLSRISIMSNAKNKFGMTGLFEFAKSTVKLILFSVCMGIYLNYRLPDMIASAATG 180 Query: 178 P---ITAMGNAMDLVGLCALLVVL--GVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQ 232 +T +G + AL++ L GV+ D FQ +K MSR++I DE K Sbjct: 181 AFVVVTMLGQLAIEFMVLALIIALAVGVV-----DAAFQQADFTRKNMMSRKEIMDEMKN 235 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 SEGDPH+KG RQ + A + DV ADV++ NPTHY+VAL++D AP V+KG Sbjct: 236 SEGDPHMKGARRQKAQQIAMSAGVQDVATADVVIVNPTHYAVALKWDRQPGQAPVCVSKG 295 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 VA IRE+ EN VP PP ARAL+ EIG +I + YA VA + + ++++ Sbjct: 296 VDEVAAIIREVANENGVPIHSDPPTARALHAAVEIGDEIHEEHYAPVAAAIRFAEKMRQ 354 >UniRef50_A0LT73 Type III secretion exporter n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LT73_ACIC1 Length = 391 Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 144/371 (38%), Positives = 208/371 (56%), Gaps = 18/371 (4%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D S KTE PT +L++AR EG++ RS E+ + L LLVG+ ++ ++ R + Sbjct: 1 MADRSQ-KTEKPTQRKLKEARREGRVARSPEVGAWLGLLVGIFLVHL---TMTRTTAAFR 56 Query: 61 SAGLHFDHSIIN-DPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 A I DPNL + + + +A PL ++L AL + V GGL S K+ Sbjct: 57 QAIDGLTQVIRTPDPNLAVHVLGTSLASGAVAAAPLAGAILLTALGASVAQGGLRLSAKA 116 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L PK+ LNPL G KRMF + G E KA+ KT L+ L+ ++ L + Sbjct: 117 LAPKWQSLNPLNGWKRMFGPRGGWEAAKALAKTGLLA----LILYDTMRGLVPLTTTGTV 172 Query: 180 TAMGNAMDLVGLCAL-----LVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 T + + G L V G++ + D +Q+ H LRM++ ++++E + +E Sbjct: 173 TPLQGVVHTAGSAVLRFARDAAVAGLL-LAFLDYAYQLRRHRASLRMTKHEVKEELRTTE 231 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDP ++ IR Q A RRRM+ DV ADV+V NPTH +VAL+Y AP +VAKGAG Sbjct: 232 GDPRIRSAIRVRQMALRRRRMIRDVATADVVVVNPTHIAVALRYTPGS-GAPTIVAKGAG 290 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL-KRWR 353 VA RIR+ + VP +E PLARALYR ++GQ+IP +L+ AVA VLA+V+ L KR R Sbjct: 291 AVAARIRDEAIRHRVPLVEDIPLARALYRICDVGQEIPRELFVAVARVLAFVFSLKKRGR 350 Query: 354 LAGGQRPVQPT 364 + G RP +PT Sbjct: 351 VGGVHRP-RPT 360 >UniRef50_C1A547 Flagellar biosynthesis protein FlhB n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A547_GEMAT Length = 366 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 124/359 (34%), Positives = 200/359 (55%), Gaps = 8/359 (2%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S+ +KTE + RLE+ARE+GQI +S E + LL + V F G L R L + Sbjct: 4 SESGGEKTEEASGKRLEEAREKGQIAKSPEFATAAFLLGFLLVFSFTGPQLWRFLLDTMG 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 L + ++ + ++ ++A+L ++ + +VA+ G + + K+L Sbjct: 64 TSLATAGDSEHMGAGLIPWMQVISFRTIVAMLGAVAAMAVVAVAVQAAQTGGLLTTKTLA 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PKF +LNP+ R+ Q+ EL KA+LK ++VG + WP + L + A Sbjct: 124 PKFERLNPMSNAGRILGKQSIVELAKALLKMMIVGYAVYMTVSDAWPDLQALALNASPMA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMV--GFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + + G AL+ G++ +V D +Q + ++ L+M++Q++++E K EG+P V Sbjct: 184 LLEVVQKYGF-ALIKNAGMMFLVLAMADYGYQRWKTMEDLKMTKQEVKEEHKSQEGNPEV 242 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGR R + R RR+M A VPKADVI+ NP H ++A++YD N AP VVA G +A R Sbjct: 243 KGRRRAIARERIRRQMFAAVPKADVIIVNPVHIAIAIKYDPNVAPAPYVVALGERKIAQR 302 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK-----RWR 353 I+E+ ++ VP +E PLARAL + A++G IP ++Y AVAEVLA+V + + +WR Sbjct: 303 IKELAFQHGVPVIENKPLARALIKVAKVGTVIPVEMYLAVAEVLAFVMRQRERYGAKWR 361 >UniRef50_B6QWX7 Translocation protein in type III secretion n=2 Tax=Bacteria RepID=B6QWX7_9RHOB Length = 377 Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 109/350 (31%), Positives = 192/350 (54%), Gaps = 9/350 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PTP R ++RE+GQ+ +S E+T+ + L ++ +WF +L G++ Sbjct: 6 SGEKTELPTPKRERESREKGQVAKSTEVTTTISLFSVIAYLWFSWDLNFSKLVGLMDD-- 63 Query: 65 HFDHSIINDPNLILGQIIL-LIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 D + D + G+ + + M +LPLI + + + G +++ S+ PK Sbjct: 64 LADLATRRDFSSSAGEGVFGVFSTFMDIVLPLIGVAIAAGIFGNFVQFGFLWAVDSIMPK 123 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES--PITA 181 SK++P G KR+FS + ++LK+ILK +L+ ++ F + + + ++ IT Sbjct: 124 LSKISPAEGFKRIFSLKQVVQVLKSILKIVLLSTMLYFTVKYAIGAYINSLSCGIPCITN 183 Query: 182 MGNA-MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + A M L+ + L +GV + D FQ +H+K L+M++++++ E K+SEG P +K Sbjct: 184 ISGAIMKLILGISFLAFVGVAIL---DFMFQKHTHIKSLKMTKEEVKREHKESEGSPEIK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G+ +++ + + + KA +V NPTHY+VA+ Y ++++ P VVAKG L AL++ Sbjct: 241 GQRKRISQEILMSDNLENTRKASAVVVNPTHYAVAISYRPDEVAVPLVVAKGLDLTALKM 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 R VP LAR L+ +I + IP ++AAVAE+L W+ Q K Sbjct: 301 RAEAEAAGVPIFANVKLARMLHAEVQIEELIPQDMFAAVAEILVWIDQNK 350 >UniRef50_C6QF02 Type III secretion exporter n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QF02_9RHIZ Length = 360 Score = 173 bits (439), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 126/365 (34%), Positives = 195/365 (53%), Gaps = 16/365 (4%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 + +TE T +L AR +G +P SRE+ + L L+ + VI G + A L G L G Sbjct: 5 DQQSRTEEATDKKLLDARNDGNVPSSREVPNFLYLMAALLVIAVLGQTFASHL-GSLLVG 63 Query: 64 LHFDHSIINDPNLILGQIILLI----REAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L + I N G ++LL + A + P+I +I+ V + K Sbjct: 64 LLANAGSIRLGNG--GDVMLLFDVVGKAAAVVTAPIILAFGAAGVIASVAQNPPIPIAKR 121 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + P S+L+P G+KRMFS E LK L+ ++V + L + W + P Sbjct: 122 VIPDISRLSPAKGLKRMFSLSGLFEFLKLSLRLVVVVVTSVAILMYMWHDFTNSIWNDPS 181 Query: 180 TAMGNAMDLVGLCALLVVLGVIP--MVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + + + ALL+ L ++ ++ FD+ + LRM+RQ+I+DE KQ EGDP Sbjct: 182 AIL--TLSQKSVVALLISLALMSFTLLIFDLPVAHVLWRRSLRMARQEIKDEQKQMEGDP 239 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K R R + +A +R+RM+ V KA +++ NPTH++VAL+Y ++ AP+VVAKG L+A Sbjct: 240 LMKARRRSIAKARSRQRMLKGVSKATIVIANPTHFAVALRYVRSEGGAPRVVAKGQDLIA 299 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 L+IR I EN +P +E LAR+LY E+ Q IP + Y A+AE+L + Q +R R Sbjct: 300 LKIRRIAEENAIPVIEDKALARSLYAKVEVDQMIPAEFYRAIAEILIRL-QARRNR---- 354 Query: 358 QRPVQ 362 Q PV+ Sbjct: 355 QNPVR 359 >UniRef50_B2IK02 Flagellar biosynthetic protein FlhB n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IK02_BEII9 Length = 360 Score = 173 bits (439), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 118/361 (32%), Positives = 196/361 (54%), Gaps = 35/361 (9%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 + D +TE PT +++ A E+G +P SRE+ +I +S++ L L+ +++ Sbjct: 6 DQDSQTEEPTAKKMDDAIEQGNLPISREM---IIFASMLSLLIVNAFILRNSLADIVTLL 62 Query: 64 LH-FDHSIINDPNLILGQIILLIREAMLALLPLI---SGVVLVALISPVMLGGLVFS-GK 118 + F++S QI L + + L LI +G LV +I P M+ G+ + G+ Sbjct: 63 KYVFNNS---------DQIPLRNQLDAVNLFQLILTETGPRLVPIILPFMIAGIAANIGQ 113 Query: 119 S--------LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQM 170 S +QP F L+ + G K++F + AE LK ++K V + L + ++ Sbjct: 114 SKLRLILERIQPDFGHLSLISGWKKLFGQKNLAEFLKNVIKLSAVALLLFMVLKGNQDKL 173 Query: 171 MRLM----AESPITAMGNAMDLVG-LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQD 225 + M + P + +M L+ +C + +VL D+ + + LRMS+Q+ Sbjct: 174 INAMFLDPSAIPELILSLSMRLLSVICIVTIVLATA-----DLLWVKNQWRRDLRMSKQE 228 Query: 226 IRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSA 285 I+DE KQ EGDP +K R+R + R+ M+ADVPKA V++ NPTH++VAL+Y + Sbjct: 229 IKDELKQMEGDPLIKARLRSVALDRIRKSMIADVPKATVVIANPTHFAVALRYVREEGGT 288 Query: 286 PKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAW 345 P VVAKG L+AL+IREI +N+P +E PLAR+L+ E+ Q IP + Y A+AE++ + Sbjct: 289 PVVVAKGTDLIALKIREIAEAHNIPIVEDRPLARSLHASVEVNQAIPAEFYRAIAEIIHY 348 Query: 346 V 346 + Sbjct: 349 L 349 >UniRef50_A0RCA2 Flagellar biosynthetic protein n=72 Tax=Bacillus cereus group RepID=A0RCA2_BACAH Length = 348 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 106/347 (30%), Positives = 189/347 (54%), Gaps = 12/347 (3%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLH 65 D+KTE TP + +K+REEG I RS++L +L +LV V++F G L ++ S + Sbjct: 4 DNKTEKATPQKRKKSREEGNIARSKDLNNLFSILVLAVVVYFFGDWLGFEIAN--SVSVL 61 Query: 66 FDHSIINDPN----LILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 FD N + ++G ++L + +L L V L + ++ G +FS K ++ Sbjct: 62 FDQIGKNTDSTEYFYMMGILLLKVSAPILIL------VYAFHLFNYMIQVGFLFSSKVIK 115 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK S++NP R+FS ++ ++LK++ L+G V + +++ ++ + + Sbjct: 116 PKASRINPKNYFTRLFSRKSLVDILKSLFYMGLIGYVAYVLFKKNLEKIVSMIGFNWTAS 175 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + + + L +++ +I + D +Q + + + ++M +++++ E K +EGDP VKG Sbjct: 176 LTEIIRQIKFIFLAILIILIVLSIIDFIYQKWEYEQDIKMKKEEVKQEHKDNEGDPQVKG 235 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 + + A + + + A IVNNPTH SV L+Y+++ +AP VVAKG +AL IR Sbjct: 236 KRKNFMHAILQGTIAKKMDGATFIVNNPTHISVVLRYNKHVDAAPIVVAKGEDELALYIR 295 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 + E +P +E PLAR+LY E + IP LY AV EV+ ++ Q Sbjct: 296 TLAREQEIPMVENRPLARSLYYQVEEDETIPEDLYVAVIEVMRYLIQ 342 >UniRef50_Q2SEX3 Flagellar biosynthesis pathway, component FlhB n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEX3_HAHCH Length = 342 Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 102/334 (30%), Positives = 185/334 (55%), Gaps = 5/334 (1%) Query: 28 RSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQI--ILLI 85 +S+E++ + L G ++W LA R L L D + + D ++I + I ++ Sbjct: 3 KSQEVSHVFALAAGALLLWSVSQDLATRFFS-LCQKLFADAASV-DFDIITAKAWGIWIV 60 Query: 86 REAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAEL 145 E L PL+ ++++ ++ ++ G VFS ++P ++NP+ G KR+FS + EL Sbjct: 61 SEVSWILSPLLVVMMVIGVLCSIVQTGPVFSFHPIKPDIKRINPITGFKRLFSIKILFEL 120 Query: 146 LKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVG 205 +K ++K L+GSV + L P + L A+S TA+ + + ++ + Sbjct: 121 VKNLIKLALLGSVLYWALAGLMPDLFGLTAKSAATALPVFIGYAAGIIFKLTAALLLIAL 180 Query: 206 FDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRR-MMADVPKADV 264 D+ F + ++ +RM++++++DE K+ EGDPH++ + ++++R +R A VP+AD+ Sbjct: 181 IDMLFTRWEFMRNMRMTKKEVKDEIKRREGDPHIRAKRKELERELRKRSGSAASVPEADL 240 Query: 265 IVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRH 324 I+ NP HY+V ++YD KM+AP V KG +A +R++ ++ VP ++ PPLAR L++ Sbjct: 241 IITNPEHYAVVVKYDAKKMAAPTVTGKGGDAMAKHLRDLARQHQVPIIQDPPLARYLFKK 300 Query: 325 AEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 EIG IP + VA L +Q+KR R Q Sbjct: 301 TEIGSMIPEDAFVGVARALRRAYQIKRERQGRDQ 334 >UniRef50_D0MGA4 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGA4_RHOM4 Length = 360 Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 126/365 (34%), Positives = 216/365 (59%), Gaps = 21/365 (5%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 + D K PTP RL+KAREEG + RS+E TS ++LL+G + + A L +A Sbjct: 3 DRDQKQFDPTPRRLQKAREEGNVFRSQE-TSAVLLLLGGLLTLALSLPYAYGLMRQFTA- 60 Query: 64 LHFDHSIINDP--NLILGQIILLIREAMLAL----LPLISGVVLVALISPVMLGGLVFSG 117 ++++ P L G +I ++EA++ L +P + ++++A V G + Sbjct: 61 ----RTLMSAPFYPLTSGSVIGALQEALMVLGRLLVPFFALLLVIAFGVNVWQTGWHPTL 116 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 K L PK +++PL G++R+FS++ +LKA+LK +VG + ++ H P+++ L S Sbjct: 117 KPLLPKPERISPLRGLQRLFSSRGLFNVLKALLKIAIVGPIAFLVIYRHLPEILELHTHS 176 Query: 178 PITAMGNAMDLVGL-CALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 + A+ A L L A + ++ + D ++ + + + L+M+ Q+++DE +++EGD Sbjct: 177 -LEAILQATGLWMLQLAAYTLGALLLLSAADFAYEKWKYRQDLKMTAQEVKDEHRETEGD 235 Query: 237 PHVKGR-IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 P VK R +++ + A RRR+ V ++DV++ NPTHY+VAL+YD ++ AP+V+AKG Sbjct: 236 PMVKSRRLKKARELARRRRLDHAVLRSDVVITNPTHYAVALRYDPSEAPAPRVLAKGIRK 295 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 ALRIR + E+ +P +E PPLARALY + Q+IP +LY AVA +LA +++ + Sbjct: 296 RALRIRALALEHGIPVVEDPPLARALYHNVPEEQEIPEELYLAVATILAEIYRQR----- 350 Query: 356 GGQRP 360 GQ+P Sbjct: 351 -GQQP 354 >UniRef50_C6N718 Putative flagellar biosynthetic protein FlhB n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N718_9GAMM Length = 361 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 116/354 (32%), Positives = 190/354 (53%), Gaps = 15/354 (4%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELT---SLLILLVGVSVIW---FGGVSLARRLSGM 59 +KTE TP++L+KA+E+GQ+ +S ELT SLL+LL +S +W + R Sbjct: 12 SEKTEKATPYKLQKAKEKGQVSKSAELTTCISLLVLLGMMSALWPKQLHEIQEMLRHILY 71 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L+A + F IN L Q IL+ + + LP VL +++ + G+V+S Sbjct: 72 LAAQMQFSLDNINH----LHQFILM--QLLHQWLPFALAGVLAIILANLTQSGIVWSTTP 125 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P F +LN + G K++FS +T E K+ LK ++ + FF + H + +A +P Sbjct: 126 LVPDFKRLNIVQGFKKLFSIKTCFEAAKSTLK-LMSTFIFLFFAFKHQLTNILPLALTPT 184 Query: 180 TAM-GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 G M + ++L + + D F+ + K RMS+Q+++DE+KQ EGDP Sbjct: 185 AQHPGLMMHFLLSLIFQLLLLLSLLAVLDKFYTRWKFAKDQRMSKQEVKDEYKQREGDPK 244 Query: 239 VKGRIRQMQRAAARRRM-MADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K +I+Q+Q+ ++ + V ADVI+ NPTH ++AL+YD M APKVV K G + Sbjct: 245 IKSKIKQLQQQLRQKTASLKQVKTADVIITNPTHLAIALKYDRTSMPAPKVVCKAQGEMV 304 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +++E+ ++ VP +E AR LY E+ Q I +LY A + ++ +R Sbjct: 305 SQVKELARKHGVPIIENKSFARLLYHSVELNQWINKELYPFAAAIFKEIYARRR 358 >UniRef50_P69986 Yop proteins translocation protein U n=49 Tax=Gammaproteobacteria RepID=YSCU_YERPE Length = 354 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 111/354 (31%), Positives = 187/354 (52%), Gaps = 26/354 (7%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTS------LLILLVGVSVIWFGGVSLARRLSG 58 S +KTE PTP ++ AR++GQ+ +S+E+ S L +L+G+S +F S + Sbjct: 2 SGEKTEQPTPKKIRDARKKGQVAKSKEVVSTALIVALSAMLMGLSDYYFEHFSKLMLIPA 61 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 S L F ++ + ++ ++L E PL++ L+A+ S V+ G + SG+ Sbjct: 62 EQSY-LPFSQAL----SYVVDNVLL---EFFYLCFPLLTVAALMAIASHVVQYGFLISGE 113 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +++P K+NP+ G KR+FS ++ E LK+ILK +L+ + + + +++L P Sbjct: 114 AIKPDIKKINPIEGAKRIFSIKSLVEFLKSILKVVLLSILIWIIIKGNLVTLLQL----P 169 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGF------DVFFQIFSHLKKLRMSRQDIRDEFKQ 232 + L+G +L L VI VGF D F+ + ++K+L+MS+ +I+ E+K+ Sbjct: 170 TCGIECITPLLG--QILRQLMVICTVGFVVISIADYAFEYYQYIKELKMSKDEIKREYKE 227 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 EG P +K + RQ + R M +V ++ V+V NPTH ++ + Y + P V K Sbjct: 228 MEGSPEIKSKRRQFHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKY 287 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 +R+I E VP L+ PLARALY A + IP + A AEVL W+ Sbjct: 288 TDAQVQTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLRWL 341 >UniRef50_C0QXX4 Flagellar biosynthesis protein FlhB n=2 Tax=Brachyspira RepID=C0QXX4_BRAHW Length = 400 Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 119/372 (31%), Positives = 207/372 (55%), Gaps = 35/372 (9%) Query: 4 ESDDKTEAPTPHRLEKAREE-GQIPRSRELTSLLILLVGVSVI-----WFGGVSLARRLS 57 E + +TE PT + KAREE G++ S E+ L+L V ++VI +F ++A+ Sbjct: 41 EDEGRTELPTERKKRKAREEEGRVVNSAEINQTLVLAVSIAVIALLTTYFTH-TVAQFFI 99 Query: 58 GMLSAGLHFDHSIIND--PNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGL-- 113 +L+ + D SI N +++L +LL + A G+++ + + L Sbjct: 100 TVLNKISNADASINNTAYTDMLLEIFVLLAKTA---------GIIMAVALVVGVGVNLAQ 150 Query: 114 ---VFSGKSLQPKFSKLNPL-PGIK-RMF-SAQTGAELLKAILKTILVGSVTGFFLWHHW 167 +F+ K L+P F ++ P K R+F S+Q L K + K I++ +T ++ Sbjct: 151 TQFLFTTKKLKPNFKRIAPTWSNFKERVFISSQNLMNLAKILFKMIVISLLTFTTIYGKR 210 Query: 168 PQMMRLMAESPITAMGNAMDLVGLCAL----LVVLGVIPMVGFDVFFQIFSHLKKLRMSR 223 ++ ++ + AM+L L V++ +I + FD FFQ ++ L+M++ Sbjct: 211 TELFNMIN----MGLSQAMNLFFFIVLEMLAKVIIFMIIVSAFDYFFQKRQYINSLKMTK 266 Query: 224 QDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKM 283 ++++EFK+ EGDP VK ++++M R R M+ VP+ADV++ NPTH++VAL+Y EN Sbjct: 267 HEMKEEFKEMEGDPLVKSQLQEMARKIVSRTMLKSVPEADVVITNPTHFAVALKY-ENGD 325 Query: 284 SAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVL 343 AP V AKGA +AL+I+EI +N+V +E PLAR LY + E+GQ IP +L+ V+ +L Sbjct: 326 YAPIVTAKGADHIALKIKEIARQNDVQIVENKPLARELYYNVELGQYIPEKLFHVVSRIL 385 Query: 344 AWVWQLKRWRLA 355 V++++ ++A Sbjct: 386 GEVYRIRNEKMA 397 >UniRef50_A5P6J3 Type III secretion exporter n=2 Tax=Erythrobacter RepID=A5P6J3_9SPHN Length = 387 Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 129/380 (33%), Positives = 205/380 (53%), Gaps = 17/380 (4%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 D +K APT RL A ++G + RS++ + ++L G + + G L L+ + Sbjct: 4 DTPGEKNFAPTEKRLADAAKKGDVLRSKDAGTAAVMLFGGAWLALAGPWLLEGLTDLARD 63 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 FD S + D + + G +I + + A+ L V++V L S + G + +L+ Sbjct: 64 AFLFDASDLRDFS-VQGLLIEGLLLGVPAVFALAVPVIVVTLFSQLAFGRGRWVTDNLKA 122 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMM---RLMAESPI 179 K ++NP+ G+KRMF Q E+ K +LK L+GS+ + W+ ++ R + + Sbjct: 123 KGQRINPMSGLKRMFGMQGLIEMGKGLLKIALLGSIAAAWWWNSMDVVIGLGRGNLSAQL 182 Query: 180 TAMGNAMD--LVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 TA A+ + L A LVV+ + D+ Q K+L+MS Q++RDE K+SEG P Sbjct: 183 TAAWRAIVSLVFALSAGLVVIAFV-----DLPIQWLRQQKRLKMSHQEMRDENKESEGSP 237 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 ++ RQ QR A + + +A ++ NPTH++VAL YD + SAP ++AKG G A Sbjct: 238 EMRAARRQRQRDIATGSVAGAMREAQFVIANPTHFAVALTYDPARASAPILLAKGRGDKA 297 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 L ++E+ +E ++PTLE P LAR++Y Q I LY+AVA V+A+V+ LKR G Sbjct: 298 LAMKELASELDLPTLEMPQLARSVYYTTRERQIICEDLYSAVASVIAYVFSLKR-----G 352 Query: 358 QRPVQPTHLPVPEALDFINE 377 + P PT + VP AL F E Sbjct: 353 ETPPLPT-VEVPAALHFDTE 371 >UniRef50_A1TJC2 Type III secretion protein, YscU/HrpY family n=5 Tax=Acidovorax RepID=A1TJC2_ACIAC Length = 352 Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 122/372 (32%), Positives = 194/372 (52%), Gaps = 42/372 (11%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLH 65 +KTE PT +L+ AR++GQ +S++L + +L + V+ G L R+ +++ L Sbjct: 2 SEKTEEPTAKKLKDARKKGQTTKSQDLVAGAVLGAALLVLTGAGPMLYDRVRRIVTTALE 61 Query: 66 FD---HSI-----------INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLG 111 HS ++ + G +I+ + A+LALLP + Sbjct: 62 QGVRVHSTQELLALLSSMALDGMAVAFGMVIVSVLVAVLALLPQV--------------- 106 Query: 112 GLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMM 171 G + + + L PKF LNP G+K+MF+A++ E K++LK ++ G+V LWH ++ Sbjct: 107 GFMITFEPLTPKFDSLNPAEGLKKMFNARSLVEFAKSVLKAVVFGAV----LWHIVTGLV 162 Query: 172 RLMAESPITAMGNAMDLVGLCALLVVLG----VIPMVG-FDVFFQIFSHLKKLRMSRQDI 226 L+ S + A + ALL + V ++G D Q + ++ RMS+ D+ Sbjct: 163 PLLVGS-VYLTPEASGQIAWSALLKLFSFAFLVFLVIGPLDFGLQHWLFMRDQRMSKDDV 221 Query: 227 RDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAP 286 + E K SEGDPH+KG ++ ++ A VP A V+V NPTHY+VAL+Y+ P Sbjct: 222 KRENKDSEGDPHLKGHLKSLREEMATSPPQERVPGATVVVTNPTHYAVALRYEAGATPLP 281 Query: 287 KVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 VVAKG A IR + A +++P + PPLARAL++ + Q IP +L+ AV+ VL WV Sbjct: 282 IVVAKGMDEQAAVIRGLAALHHIPLIANPPLARALHK-LPLDQPIPEELFEAVSVVLRWV 340 Query: 347 WQLKRWRLAGGQ 358 +L RL GG Sbjct: 341 AELD--RLGGGS 350 >UniRef50_B5JK52 FlhB/HrpN/YscU/SpaS family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JK52_9BACT Length = 369 Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 115/367 (31%), Positives = 200/367 (54%), Gaps = 29/367 (7%) Query: 1 MSD-ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D + D KTE PT RL +E+G P+++E+ LL G+ V+ F G ++A Sbjct: 1 MADTDQDSKTEKPTAKRLTDEQEKGNFPQAQEVGVTFTLLAGLLVVMFSGQTIASNAFSF 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLV----F 115 S+ L SI +L I E ++ L L + +L ++S ++ GGL F Sbjct: 61 SSSILGNLSSI----DLSTNNISYFFNEVIVVLGRLAAPFMLAGMVSGIIAGGLQTRFRF 116 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQT----GAELLKAILKTILVGSVTGFFLWHHWPQMM 171 + K+L KF+KLNP+ G K++ S G +LLK +G++ G LW +++ Sbjct: 117 TPKALGIKFNKLNPINGAKQLVSKDVFVRFGIDLLK-------MGAM-GLILWVAMRKII 168 Query: 172 RL-MAESPITAMGNAMDLVG-----LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQD 225 + + +PI + M + L + +G+I ++ + +Q + K++M++++ Sbjct: 169 KDPIFYAPIDIVHVGMFITDTLVYVFIRLTIAVGLIAIISY--LWQSKKTMDKMKMTKEE 226 Query: 226 IRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSA 285 ++ E K + P ++ QM + +M+ +V ADV+V NPTHY+VAL+Y+ SA Sbjct: 227 VKQERKDQDMSPEIRKARMQMAMRLMQGQMLDEVATADVVVTNPTHYAVALKYERGVDSA 286 Query: 286 PKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAW 345 P V+AKG A RI+E+ AE+ VP +E +AR LY+ A++G IP +++ +VAE+LA+ Sbjct: 287 PMVLAKGENAFAQRIKEVAAEHGVPVVENKMVARMLYKVAQVGAAIPMEMFQSVAEILAF 346 Query: 346 VWQLKRW 352 V++ R+ Sbjct: 347 VYKTHRY 353 >UniRef50_UPI00019F17CC secretion system apparatus protein SsaU n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F17CC Length = 347 Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 101/341 (29%), Positives = 178/341 (52%), Gaps = 6/341 (1%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KT+APT ++ AREEGQ+ ++ EL + + L V + ++ G + + LS +L Sbjct: 2 SGEKTQAPTSKKIRDAREEGQVAKTAELAAGVQLAVILMYLYLWGDDIWQDLSDLL---- 57 Query: 65 HFDHSIINDP-NLILGQIILLIREAMLALLPLISGVVLVALISPVMLG-GLVFSGKSLQP 122 F +NDP + I + + + L + V+ A +S + G +FSGK++ P Sbjct: 58 LFTIDKMNDPLPIAFAGFISMFGKFVFEDLIFLFAVLFFASMSAYLAQIGFLFSGKAMMP 117 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 K KL+ + +K +FS ++ ELLK ++K ++GSV + + P + ++ P AM Sbjct: 118 KLDKLDVVKNLKNIFSVKSLVELLKNLVKMTIIGSVFYYLFCRYIPSLRNMVYIEPADAM 177 Query: 183 GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 + ++ +VL I D +Q + +K LRMS ++++ E+K+ EG VK Sbjct: 178 QVTLKIIFWLWGGLVLCYIVFSLADYAYQRYELMKNLRMSHEEVKQEYKEMEGSAEVKSH 237 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 + + + + V K+ ++ NPTH ++ + YDEN P + AKGA L+A I + Sbjct: 238 RKSLHQEIQSGSLANTVKKSSAVIRNPTHLAICIYYDENITPLPVITAKGADLIARYIVD 297 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVL 343 I + VP +E PLAR L + + G I ++A++E+L Sbjct: 298 IAEKAGVPVIENVPLARGLNKEIKTGDYISPPFFSAISEIL 338 >UniRef50_B0SDH0 Endoflagellar biosynthesis protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SDH0_LEPBA Length = 444 Score = 166 bits (421), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 111/357 (31%), Positives = 196/357 (54%), Gaps = 20/357 (5%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARR----LSGML 60 + +TE P+ R + +E+G +P+S E+ S ++LL G V++ G + + + L Sbjct: 93 DEGRTEPPSERRRREEKEKGNVPKSNEVASTMVLLGGTGVLFLLGDTFIKNTAIFIKKYL 152 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 G+H + + +IL + ++ L P+++ ++ A++ V+ G +FS ++L Sbjct: 153 PMGMHHERFGAEEFRVILSGVS---KDFFNLLWPVLAITLVFAIVGNVVQVGFMFSPRAL 209 Query: 121 QPKFSKLNPLPGIKRMF-SAQTGAELLKAILKTILVGSVT-----GFFLWHHWPQMMRLM 174 +F +++P KR+ + QT L+K++ K +L+G ++ G FL M +M Sbjct: 210 SFRFDRISP--NFKRVLPNRQTLFNLVKSLAKVVLIGVISYILISGDFLKVLLTGNMGMM 267 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 IT + + + + A L++LG+ D FFQ + L+ + + + E K+ Sbjct: 268 --QAITLVTYSGFKIMMAAGLLLLGIAVA---DFFFQKSEFEESLKQTPSEAKREMKEDS 322 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDP +K R Q+ R + M+ +VPKADV++ NPTHYSVAL Y+ + SAP+V+AKG Sbjct: 323 GDPVMKNRRMQLARDMMQGNMLREVPKADVVITNPTHYSVALSYEMGRDSAPRVIAKGEN 382 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +AL IR I EN+VP +E+P AR LY E+G +IP + + AV ++L + + K+ Sbjct: 383 RLALEIRRIARENDVPIVESPKQARLLYAQVEVGDEIPQEFFQAVVQILITLEKFKK 439 >UniRef50_B5Y7F6 Flagellar biosynthetic protein FlhB n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7F6_COPPD Length = 343 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 122/347 (35%), Positives = 193/347 (55%), Gaps = 15/347 (4%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 ++TE P+P RLE+A +EG +P+S ELT + L V V ++ V R +S Sbjct: 5 ERTEPPSPRRLERAIQEGNVPQSPELTGAIGLFVFVLIL---RVYYPRFVSSWQRMWFGV 61 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 +S+ P + ++ +L+ LP++ +L +++ ++L G+ K + PK Sbjct: 62 FYSV--SPETAAHDLAVV----LLSTLPVLLVPLLAVVLATLVLSGVRLYPKKMVPKLDG 115 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA--ESPITAMGN 184 LNP IKR+FS Q+ ++ +LK IL+ SV +FL +++ +M+ + PI M Sbjct: 116 LNPAQNIKRIFSLQSLEQMGIGLLKVILL-SVVAYFLAKD--RLVGIMSGTQDPIQFMSL 172 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 + ++ L +V + + D FQ L+M+++++++E K EGDP VK R+R Sbjct: 173 SASILTDILLYLVAVYLLIGLADYAFQRRRWWNSLKMTKEEVKEEMKSIEGDPTVKARLR 232 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 R A RR +ADV KA V++ NPT Y+VAL+Y E M AP++VAKGAG +A RI++ Sbjct: 233 SRMRQYAMRRSLADVKKATVVITNPTEYAVALRY-EKGMVAPELVAKGAGWLAQRIKDEA 291 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 NVP + P LAR ++R E+G I LY AVA VL V + KR Sbjct: 292 RRYNVPVVVRPELARTIFRKVEVGDYITPDLYQAVAAVLVEVMKKKR 338 >UniRef50_C9NX90 Type III secretion inner membrane protein HrpY n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NX90_9VIBR Length = 350 Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 109/346 (31%), Positives = 189/346 (54%), Gaps = 20/346 (5%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT RL AR++GQ+ +S E+ + + V + G + + M+ + Sbjct: 3 EKTEKPTQKRLRDARKKGQVIKSNEIVTGFQMAVILGYFIIEGQGMMEAIWKMIDLAI-- 60 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALI----SPVMLGGLVFSGKSLQP 122 + I+ P + + + + + L+ I+G+V + +I S ++ G V++ +SL+P Sbjct: 61 --TSIDLPLKVAAETV--VAAFVYILIRFIAGLVFILVITVAFSCMVQTGPVWASESLKP 116 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 F+K+N + K +FS ++ EL K +LK ILV S+ ++L H M + + P + Sbjct: 117 SFNKVNVINNAKNIFSMKSLFELCKNMLK-ILVLSLVFYYLLHQHVNMFQYL---PTCGV 172 Query: 183 GNAMDLVG-----LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 ++++ L +V ++ VG D F F +K+L+MS++D + E+K++EG+P Sbjct: 173 DCGVEIIFTLIKWLWGAFLVCYLVFSVG-DYAFVHFQTMKQLKMSKEDTKQEYKETEGNP 231 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 VK + R++QR A ++++V K+ VIV NPTH +V L Y + P V+ K +A Sbjct: 232 EVKQKRRELQRETANGSLVSNVKKSTVIVRNPTHIAVCLYYQPGETPLPLVLDKAQEHMA 291 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVL 343 L + E+ ++ VP +E PLARALY E GQ IP L+ VAE+L Sbjct: 292 LHVVEMAEKHEVPLVENIPLARALYHQVEPGQVIPESLFEPVAELL 337 >UniRef50_Q2SC29 Type III secretory pathway, component EscU n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SC29_HAHCH Length = 351 Score = 164 bits (414), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 109/360 (30%), Positives = 187/360 (51%), Gaps = 24/360 (6%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTS------LLILLVGVSVIWFGGVSLARRLSG 58 SD+KTE PTP +L AR++GQ+ S+++ S + +LL+ S + +S+ L Sbjct: 2 SDEKTEKPTPKKLRDARKKGQVAHSKDVVSTATICAMFLLLLATSDTYLSHLSILIELPA 61 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLV-ALISPVMLGGLVFSG 117 + D + +++ +I + L L+P+ GVV+ A+++ + G +F+ Sbjct: 62 Q-----YMDRPFLEALPMVVDNVIYEL--IYLTLMPV--GVVMASAILANFLQVGALFAV 112 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 +SL+P KLNP+ G K++F + E +K+++K ++ + + + RL Sbjct: 113 ESLKPDLKKLNPVEGFKKIFCVKNFIEFIKSLIKVGVLSYLVYMLIKDNLNDSARLH--- 169 Query: 178 PITAMGNAMDLVG-LCALLVVLGVIPMVGF---DVFFQIFSHLKKLRMSRQDIRDEFKQS 233 + D VG L L++ I + D F Q +K+ +MS+ +++ E+KQ Sbjct: 170 -YCEVECIPDFVGTLLKQLILYSAITFIALAAADFFIQKQQFIKQQKMSKDEVKREYKQM 228 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EG P +KG+ +Q+ R + A V K IV NPTH +V + Y++ PKV+ KGA Sbjct: 229 EGSPEIKGKRKQIHREMMNTSIPAQVKKCSAIVTNPTHLAVGIYYEKGVEDVPKVMVKGA 288 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +A IR+I E +P +E PLAR L++ A++ +P L+ AVA VL WV L + R Sbjct: 289 DQMAKVIRKIAEEEGIPMMENVPLARGLWKRAQVNDYVPPDLFEAVAAVLQWVDSLDQQR 348 >UniRef50_C0AA48 Type III secretion exporter n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AA48_9BACT Length = 369 Score = 163 bits (413), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 124/363 (34%), Positives = 189/363 (52%), Gaps = 28/363 (7%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 + D KTE P+ RL +A E GQ ++ EL + +L + ARR++ + Sbjct: 5 DQDQKTELPSEKRLSEAYERGQFAKTPELGIVFMLAAAFGALSMACEDGARRVAEYATGI 64 Query: 64 LHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 H++ L+ + + AL PL+ V AL+S + G + K+L K Sbjct: 65 FEQLHTVRISSGLVPAPVAMGAVTFAGALAPLMIASVGAALLSGGIQTGFRVTPKALGFK 124 Query: 124 FSKLNPLPGIKRMFSAQT----GAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 KLNP+ G R+FS T G + LK SV F LW R + P+ Sbjct: 125 PEKLNPVTGFGRVFSKNTLVHGGIDFLKV--------SVIAFSLW----LAARTLLGDPL 172 Query: 180 TAMGNAMDLVG----------LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDE 229 +G L LL+ +G+I + + ++ F ++L M+RQ++++E Sbjct: 173 FTAPVETAYLGEFIHRSLMALLARLLLAMGIIAAISYA--YEWFKTHRELMMTRQEVKEE 230 Query: 230 FKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVV 289 +QS+GD VK +R+M R RR+M+A VP ADV+V NPTHY+VAL+Y+ AP V+ Sbjct: 231 RRQSDGDALVKSALRRMARRLMRRQMLAAVPTADVVVTNPTHYAVALKYERGIDKAPVVL 290 Query: 290 AKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 AKG +ALRI+ I AE+ VPT+E +AR L+ E+G+ IPG+LY AVA +LA V++ Sbjct: 291 AKGDRRLALRIKAIAAEHEVPTVEDRAVARLLFATGEVGKPIPGELYQAVAGILAMVYRT 350 Query: 350 KRW 352 R+ Sbjct: 351 HRY 353 >UniRef50_UPI0001910014 flagellar biosynthesis protein FlhB n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E01-6750 RepID=UPI0001910014 Length = 103 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 91/103 (88%), Positives = 99/103 (96%) Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 MLSAGLHFDH ++NDPNLILGQIILLI+ AM+ALLPLI+GVVLVALISPVMLGGL+FSGK Sbjct: 1 MLSAGLHFDHRMVNDPNLILGQIILLIKAAMMALLPLIAGVVLVALISPVMLGGLIFSGK 60 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGF 161 SLQPKFSKLNPLPGIKRMFSAQTGAELLKA+LK+ LVG VTGF Sbjct: 61 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAVLKSTLVGCVTGF 103 >UniRef50_O83710 Flagellar biosynthetic protein flhB n=4 Tax=Treponema RepID=FLHB_TREPA Length = 376 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 117/360 (32%), Positives = 191/360 (53%), Gaps = 26/360 (7%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 E + ++E PT +L KAREEG++P+S++L ++L + ++ + R G+L Sbjct: 23 EDEGRSEDPTETKLRKAREEGRVPKSQDLNGAFVMLFTSTSLFLLAPFILRECIGVLR-- 80 Query: 64 LHFDH----SIINDPNLILGQIILLIREAMLALLPLISGVVLVALISP--VMLGGLVFSG 117 F SI N G + +R M LP IS V LV+ ++ V ++FS Sbjct: 81 FFFTRATTASIQNT-----GWFFVFVRYFMKLALP-ISFVALVSGVAANIVQNKTVLFSV 134 Query: 118 KSLQPKFSKLNP--LPGIKRMFSAQTG-AELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 KS++P+F K++P + KR F + G LLK+++K + V+ F + + + L+ Sbjct: 135 KSIRPQFKKISPDVIRFFKRSFFSTEGLFNLLKSLIKITAIFFVSYFTIRNDLFMFVSLL 194 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 S ++ L G L V L ++ D FFQ + L+MSRQ++++E K+ E Sbjct: 195 GVSLTQSIFYITSLAGKVLLEVSLLLVVFSLPDYFFQRRQFIDSLKMSRQEVKEELKEQE 254 Query: 235 GDPHVKGRIR-QMQ---RAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVA 290 GDP V+ +R QMQ R +AR + ADV++ NPTH++VA+QY+ M+AP VVA Sbjct: 255 GDPLVRSYVRKQMQSLVRESAR-----NTTDADVVITNPTHFAVAVQYEPAYMTAPTVVA 309 Query: 291 KGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 KG+ A RI+ + E + E PLARALY IG+++P + + A+ + + + K Sbjct: 310 KGSDGTAYRIKRLAKEAGILIEENKPLARALYTQVAIGREVPYEYFNALVLIFTKLDKFK 369 >UniRef50_A1B5B9 Type III secretion exporter n=3 Tax=Rhodobacterales RepID=A1B5B9_PARDP Length = 368 Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 120/356 (33%), Positives = 184/356 (51%), Gaps = 30/356 (8%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILL-----VGVSVIWF--GGVSLARR 55 + +DDK T +L KAR+EG +PRS EL S L+ L + IW + +A R Sbjct: 4 ENNDDKQFDATESKLRKARQEGDVPRSAELQSALMYLGFWFAALFATIWAVPAWLGMAAR 63 Query: 56 LSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLG---- 111 + G ++ + + GQ A L ++GV ++AL P++LG Sbjct: 64 VLGGEPWPDAEGRAVADLARALAGQ----------AGLVTVAGVAIMAL--PILLGMVAQ 111 Query: 112 -GLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQM 170 +V + K L P F ++NP+ + F ++ K +LVG V G+FL+ + Sbjct: 112 RSVVLTPKKLLPDFKRVNPVKNAAQKFGKSGLVTFAISLGKALLVG-VGGWFLYAS--LL 168 Query: 171 MRLMAESPITAMG--NAMDLVGLCALLVVLGVIPMVGF-DVFFQIFSHLKKLRMSRQDIR 227 LM + + + L+ A+L+ LG+ + D+ ++ +LK+ RMSRQ+++ Sbjct: 169 AWLMTSGAMRDLQWVEGLGLILRRAVLLALGIGAIFAIIDLIWKRLEYLKRHRMSRQEMQ 228 Query: 228 DEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPK 287 DE K++EGDPH+K RQ M+ADV KADVI+ NPTHY+VAL++ AP Sbjct: 229 DEHKENEGDPHLKAARRQKGVDIVLSAMLADVQKADVIIVNPTHYAVALEWKRGSGRAPV 288 Query: 288 VVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVL 343 +AKG VA RIRE ++ VP PP ARAL+ EIGQ+I + +A VA + Sbjct: 289 CLAKGVDDVARRIRERAQDHRVPIWSDPPCARALHATVEIGQEIKAEHFAPVAAAI 344 >UniRef50_Q057S3 Type III protein export, membrane component n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057S3_BUCCC Length = 371 Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 106/361 (29%), Positives = 186/361 (51%), Gaps = 4/361 (1%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLH 65 ++KTE TP++++K ++ G S +L S ILL S + + + Sbjct: 7 ENKTEEATPNKIKKFKKNGIFQSSHDLNSFFILLFFFSFFYINKKFIFFYFLKLFILSFS 66 Query: 66 FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFS 125 F +IIN P+ I+ ++ L L G+ + +ISPV++ + K L + Sbjct: 67 FQTNIINQPHFFFDSFFQNIKFLLIFFLILFIGIFFILIISPVLIYKEITKIKFLNFNLN 126 Query: 126 KLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA--MG 183 LN L +K+ E + K ILV V+ F+ + + + S + +G Sbjct: 127 FLNILNNVKKKSLFDLIIEFFFSFFKIILVFFVSFIFVKTMYFKKKYFYSYSFFSNIFLG 186 Query: 184 NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRI 243 + LL++ +I ++ + + F H L+M+ Q+I+DE K+ +G+P +K RI Sbjct: 187 YKFVYRFISLLLMIFLIIAIIDSSI--KYFKHFNNLKMTIQEIKDEQKELDGNPIIKQRI 244 Query: 244 RQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREI 303 R + + R+ + + V K++VI+ + +++VA+QY+ + S P + AKG+G VALRI +I Sbjct: 245 RFLMKQTLRKSVFSQVIKSNVIIYDSVNFAVAIQYNIHLNSTPIISAKGSGKVALRIIKI 304 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQP 363 ENN+P + +A+ LY + IG I L+ ++A++LAW W+LK W+ GG P QP Sbjct: 305 AEENNIPIFFSNSIAKYLYNNFFIGNNISVNLHYSIAKILAWAWKLKYWKQHGGIYPTQP 364 Query: 364 T 364 T Sbjct: 365 T 365 >UniRef50_Q1IR59 Type III secretion exporter n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IR59_ACIBL Length = 351 Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 133/365 (36%), Positives = 204/365 (55%), Gaps = 29/365 (7%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSREL-TSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D S KTE PT R +KARE+GQ+ RSREL +L I++V V ++ V+L G Sbjct: 1 MADSS--KTEQPTQQRRKKAREKGQVARSRELPGALTIIVVLVWILSLNSVALFT-WRGF 57 Query: 60 LSAGLHFD--HSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 + L + P L+ I + A ++P++ G +A S ++ GG VFS Sbjct: 58 YRSLLQQAALQELTLSPALLQKTIWV---AAQWTVVPML-GAFAIATASTLLQGGFVFSS 113 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAIL--KTILVGSVTGFFLWHHWPQMMRLMA 175 ++L K +L+P +K++FSA + LK++L IL +V+ W +RL Sbjct: 114 EALAWKPERLSPGHRLKQIFSAAGLSNTLKSLLPFAAILWLAVSQIR--SEWVTFIRL-G 170 Query: 176 ESPITAMGN-----AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEF 230 P+ +G+ + LV C L+++L D Q L+MSR++I+ EF Sbjct: 171 GLPVARIGSWLLAQCVALVWKCCLVLLL----WSALDYLLQRQRLEGDLKMSREEIKQEF 226 Query: 231 KQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVA 290 K+SEG+P VK +IR+MQR R++M+ V A V+V NPTHY++AL+Y + +AP +VA Sbjct: 227 KESEGNPQVKAKIRRMQRQVRRQQMLHAVKAATVVVTNPTHYALALEYRPD-FAAPVLVA 285 Query: 291 KGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW--- 347 KG +A I+++ + +P +E LA ALYR E+GQ IP +L+ AVAEVLA V+ Sbjct: 286 KGLDRLAEEIKQVAIWHEIPLVENRALAHALYRSVEVGQAIPSKLFTAVAEVLAAVYRAQ 345 Query: 348 -QLKR 351 Q+KR Sbjct: 346 AQVKR 350 >UniRef50_A8LMR4 Flagellar biosynthesis protein FlhB n=3 Tax=Rhodobacteraceae RepID=A8LMR4_DINSH Length = 362 Score = 160 bits (404), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 121/364 (33%), Positives = 186/364 (51%), Gaps = 29/364 (7%) Query: 3 DES-DDKTEAPTPHRLEKAREEGQIPRSRELTS--------LLILLVGVSVIWFGGVSL- 52 DES DDK + +L AR++G++ +S +L + L ++ G + ++ Sbjct: 4 DESPDDKPFEASEKKLLDARKKGELVKSTDLIATGSYGGLILGLVFAGAGTLTISAATMQ 63 Query: 53 -----ARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISP 107 A L+ L AG S+ LILG + L ++ LP++ A+ S Sbjct: 64 GLLREADTLAPELFAGGASSISL----TLILGTVGAL---SLWFFLPMLG-----AIASL 111 Query: 108 VMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHW 167 V+ LVF+ L+PK ++++ L K F + E LK+ K ++ + G + Sbjct: 112 VLQRALVFAPTKLEPKLNRISILSNAKNKFGREGLFEFLKSTFKLVVFSILLGLLFMYEL 171 Query: 168 PQMMRLMAESPITAM-GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDI 226 M+ L A+ P++A+ G L+ LV L + + G D +Q HL+K RMSRQ++ Sbjct: 172 DTMISLAAQ-PVSAIIGFVFYLLIEFLALVFLATLLIGGVDYIWQRAQHLRKNRMSRQEV 230 Query: 227 RDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAP 286 DE K +EGDPH K RQ A ++M+ADVP A V+V NPTHY+VAL++D +AP Sbjct: 231 VDETKSAEGDPHSKQYRRQRAIEIATQQMLADVPDASVVVVNPTHYAVALKWDRFSPTAP 290 Query: 287 KVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 VVA G VA IR+ E VP PP ARALY ++GQ+IP + AVA + + Sbjct: 291 IVVASGVDHVAAAIRQRAQEAGVPIHRDPPTARALYATCKLGQEIPRAQFKAVAAAIRFA 350 Query: 347 WQLK 350 ++ Sbjct: 351 EAMR 354 >UniRef50_A6CGV2 Flagellar biosynthetic protein FlhB (Fragment) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CGV2_9PLAN Length = 323 Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 107/320 (33%), Positives = 175/320 (54%), Gaps = 14/320 (4%) Query: 37 ILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSI-INDPNLI--LGQIILLIREAMLALL 93 ++L +V++F V L+ + ++ L + ++ P LI II L E L ++ Sbjct: 2 MMLATAAVLYFFAVRLSSDMKNLMEVSLTTPVWLRVDQPLLIERCESIIELFLEGTLVMM 61 Query: 94 PLISGVVLVALISPVMLG----GLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAI 149 +V +S V L G + + LQ K+ +LNP+ G KR+ S + +L ++ Sbjct: 62 -------VVLFVSAVFLNIVQVGFMMTPDVLQLKWERLNPIEGAKRIISIRGLVKLGVSL 114 Query: 150 LKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVF 209 K L+ + +F + +P + LM P T + + + LL+ L +I + G D Sbjct: 115 GKISLLVLIAVWFSYLVFPGFLGLMGAPPETILRDIFNSTIELGLLLALALIILGGLDYA 174 Query: 210 FQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNP 269 FQ + H K L MS+Q+IR+E K +GDP ++ R R+ R A + ++ V ADV++ NP Sbjct: 175 FQKWKHEKDLMMSKQEIREEMKSMDGDPLIRQRRREAHRKLAMSQELSKVESADVVITNP 234 Query: 270 THYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQ 329 TH S+A++YD M AP VVAKGAG +A +IR+I E+ +P +E LAR +YR + GQ Sbjct: 235 THISIAIKYDPESMPAPVVVAKGAGEIAFQIRKIANEHGIPIIERKALARQMYRDVKTGQ 294 Query: 330 QIPGQLYAAVAEVLAWVWQL 349 +IP +LY E++A+V+ L Sbjct: 295 EIPFELYEVFVEIMAYVYSL 314 >UniRef50_Q16DQ8 Flagellar biosynthetic protein FlhB n=15 Tax=Rhodobacterales RepID=Q16DQ8_ROSDO Length = 362 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 118/360 (32%), Positives = 179/360 (49%), Gaps = 20/360 (5%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 DE DK+ TP +L +AR++G+I RS EL L S F L SG+L Sbjct: 5 DEEADKSFEATPQKLLEARKKGEIARSTEL------LTAASYAGFLLALLLFGESGLLEL 58 Query: 63 G----LHFDHSIINDPNLILGQIIL----LIREAMLALLPLISGVVLVALISPVMLGGLV 114 G + S P G + +I+ ALLP+ L ++ G+V Sbjct: 59 GSTMAVIIGQSAQIAPLFFEGAGTVPARGIIQSTGSALLPIFVYPALAVMLVLFATRGIV 118 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 F+ +QPK SK++ + K F + + + K I+ ++ FL+H +M+ + Sbjct: 119 FAPTKVQPKLSKISVISNAKNKFGRTGLFQFVLSFSKLIIYSAILAVFLYHRTNEMVAAL 178 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMV---GFDVFFQIFSHLKKLRMSRQDIRDEFK 231 +P + L +C ++ VI G D +Q F HL+K +MSR+++ DE K Sbjct: 179 QTTP---QYTVILLAKICIEFLIYVVIVSAIIGGIDAIWQHFEHLRKNKMSRKEVMDETK 235 Query: 232 QSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAK 291 SEGDP++K RQ ++ A ++ +V ADV++ NPTH++VAL++D AP VAK Sbjct: 236 NSEGDPYMKQERRQRAQSLAGTQVAVEVAAADVVIVNPTHFAVALKWDRTPGQAPVCVAK 295 Query: 292 GAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 G ALRIREI EN VP PP ARAL+ IG QI + Y AVA + + +++ Sbjct: 296 GVDETALRIREIATENAVPIHSDPPAARALHATTNIGDQIAPEHYKAVAAAIRFAENMRK 355 >UniRef50_B1Z5N7 Type III secretion exporter n=4 Tax=Burkholderia cepacia complex RepID=B1Z5N7_BURA4 Length = 352 Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 113/350 (32%), Positives = 190/350 (54%), Gaps = 18/350 (5%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 SD+KTE PT +L+K REEGQ+ +S +L + L V V+ G LA L ++ + Sbjct: 2 SDEKTEEPTDKKLDKVREEGQVAKSSDLVEVASLGSIVLVLTAGQHYLADTLRAVVKEAI 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVML----GGLVFSGKSL 120 F H P + + L+ + AL L+ G+ VAL++ + GL S K++ Sbjct: 62 DFTHG----PRELQDLSVALVHMGLQAL-GLLCGIAAVALVAAFLALAPQTGLKISLKAV 116 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA---ES 177 PK + ++P G +R+FS + +L+K ++K ++ +V +W M ++A + Sbjct: 117 MPKLASVSPGSGFQRIFSMNSAIDLVKMVVKAAILVAV----MWQTIKSAMPVVASALDQ 172 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVG-FDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 + + + V + ++V LGV +G FD Q + ++K RMS+ +++ E K+S+G+ Sbjct: 173 SVPQLIAVLWSVLMHVVVVALGVFIAIGAFDYKLQKWLFIRKNRMSKDEVKREHKESDGN 232 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P VKG ++M R ++ V +A+V+V NP HY+VAL+YD + P V+AKG Sbjct: 233 PEVKGERKRMAREMSQEGPKGGVSRANVVVVNPVHYAVALRYDPTEFPLPVVLAKGLDEQ 292 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 ALR+R+ VP + PP+AR L++ + Q IP +L+ VA +L WV Sbjct: 293 ALRLRQQAMHARVPIVANPPVARMLHK-VPLNQPIPEELFEVVAAILRWV 341 >UniRef50_P96069 Secretion system apparatus protein ssaU n=35 Tax=Enterobacteriaceae RepID=SSAU_SALTY Length = 352 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 105/355 (29%), Positives = 175/355 (49%), Gaps = 24/355 (6%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLH 65 +KTE PT +L R+EGQ+ +S E+TSL L+ F ++ +L + Sbjct: 2 SEKTEQPTEKKLRDGRKEGQVVKSIEITSLFQLIALYLYFHF----FTEKMILILIESIT 57 Query: 66 FDHSIINDP-NLILGQIILLIREAMLALLPLISGVVLVALISPVMLG-GLVFSGKSLQPK 123 F ++N P + L Q+ + E++ + L + V+VA + V L G+V + K++ K Sbjct: 58 FTLQLVNKPFSYALTQLSHALIESLTSALLFLGAGVIVATVGSVFLQVGVVIASKAIGFK 117 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG 183 +NP+ K++FS + EL K+ LK I++ + FF +++ L P + Sbjct: 118 SEHINPVSNFKQIFSLHSVVELCKSSLKVIMLSLIFAFFFYYYASTFRAL----PYCGLA 173 Query: 184 NAMDLV---------GLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 + +V G+ +V+G++ D FQ + K L+MS+ D++ E K E Sbjct: 174 CGVLVVSSLIKWLWVGVMVFYIVVGIL-----DYSFQYYKIRKDLKMSKDDVKQEHKDLE 228 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDP +K R R+MQ + V ++ +V NPTH +V L Y M P+V+ KG+ Sbjct: 229 GDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSD 288 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 A I I N +P +E LAR+L+ E G +IP L+ VA +L V ++ Sbjct: 289 AQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKI 343 >UniRef50_D2TZS1 Type III secretion inner membrane protein YscU,SpaS,EscU,HrcU,SsaU n=1 Tax=Arsenophonus nasoniae RepID=D2TZS1_9ENTR Length = 352 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 105/361 (29%), Positives = 190/361 (52%), Gaps = 36/361 (9%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML-----S 61 +KTE PT R+ +AR++GQ+ +S E+ ++L + V + + G +L + ++ S Sbjct: 6 EKTEKPTQKRMNEARKKGQVIKSNEIVTVLKMAVILGYLIVEGHALFNAIGELIILTVRS 65 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 L D + I+G I+L+ M+ L+ ++ ++ +S ++ G +++ KSL Sbjct: 66 LSLPIDVA----AKTIIGSFIMLLLRFMVGLVVVL---IVTICLSCIVQTGPIWAHKSLA 118 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 F+K+N + K++FS + E K ILK I++ ++ ++L ++ + + + I Sbjct: 119 FSFNKMNIIKNAKQIFSMKNLFEFGKNILKVIVL-TLVFYYLLDYYVNLFQYLPTCGID- 176 Query: 182 MGNAMDLVGLCALLVVLGVIP------MVGFDVF------FQIFSHLKKLRMSRQDIRDE 229 C ++V +I +V + VF FQ + +K+L+MS++D + E Sbjct: 177 ----------CGVMVTFTLIQWLWGGFLVCYIVFAIADYGFQYYHVMKELKMSKEDTKRE 226 Query: 230 FKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVV 289 FK +EG+P +K + R++QR ++A+V K+ VI+ NPTH V L Y P+VV Sbjct: 227 FKDTEGNPQIKQKRREIQREITSNSVVANVRKSTVIIRNPTHIVVCLYYQPGITPLPQVV 286 Query: 290 AKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 K +AL I ++ + +P +E LARAL++ E GQ IP L+ VAE+L V L Sbjct: 287 EKFQDNMALHIVKLAEKAGIPMVENILLARALFQQVETGQMIPESLFEPVAELLRLVMDL 346 Query: 350 K 350 + Sbjct: 347 R 347 >UniRef50_A3D418 Type III secretion protein, YscU/HrpY family n=10 Tax=Proteobacteria RepID=A3D418_SHEB5 Length = 349 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 114/353 (32%), Positives = 186/353 (52%), Gaps = 28/353 (7%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT RL +AR GQ+ +S E+ + L + + + + G +L + + ++ Sbjct: 3 EKTEKPTEKRLREARNRGQVIKSAEIVTGLQMAIILGYFLYEGPALVQAMMALIDL---- 58 Query: 67 DHSIINDPNLILG----QIILLIREAMLALLPLISGVVLVALISPVMLG-----GLVFSG 117 IN NL L QI+ AMLAL + G+ LV L+ +++G G V++ Sbjct: 59 ---TINAINLPLETAAEQIVGTF--AMLAL-RFLGGLTLV-LVFTIVVGNSVQTGPVWAT 111 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 +S+ P +KLN + K++ S ++ EL K ++K + V S+ ++L H + + + Sbjct: 112 ESIMPSMNKLNVMNNAKQLISLKSLFELAKNLVK-VTVLSLVFYYLLHRYVNAFQYL--- 167 Query: 178 PITAMGNAMDLVGLCALLV---VLGVIPMVGF-DVFFQIFSHLKKLRMSRQDIRDEFKQS 233 P+ + ++ + LG + G D FQ +S +K+L+MS+ D + E+K S Sbjct: 168 PLCEEACGISVISTMITWLWGSFLGCYLIFGIADYAFQRYSLMKELKMSKDDTKQEYKDS 227 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EG+P +K + R+ QR A + +V KA V+V NPTH +V L Y E + PKV+ K Sbjct: 228 EGNPEMKQKRRETQREVASGSLANNVRKATVVVRNPTHIAVCLYYCEGETPLPKVLEKAE 287 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 +AL I + + VP +E PLARAL++H E G IP L+ VAE+L V Sbjct: 288 DHMALHIVALAEKAGVPIVENIPLARALFKHVETGDVIPESLFEPVAELLRLV 340 >UniRef50_Q1NCU7 YscU; putative type III secretion protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCU7_9SPHN Length = 375 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 109/359 (30%), Positives = 185/359 (51%), Gaps = 21/359 (5%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 ++ DKTE PTP RL AR +G I +S+++ L +++ ++ F +++G++ Sbjct: 5 NDGGDKTEKPTPKRLRDARRKGDIAKSKDVGPALGMIMWFLLLLFAAGHAGAQITGLMRD 64 Query: 63 GLHFDHSIIND---PNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L S+ D P L +++L+ ++L L P L+ +I+ + G + + + Sbjct: 65 TLGTATSMPFDAAAPVLGWAALLVLVSVSLLILGP----AALIGVIAEFVQVGALVTTEK 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+P KLNP+ G+KRMFS ELLK + K L+ ++ G LW + L+ + Sbjct: 121 LKPSLDKLNPIEGLKRMFSMDNLVELLKTVAKATLILTIAGVILWRSADGFVSLVQAAGW 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIF-------------SHLKKLRMSRQDI 226 + + + D V A+L ++ + + F IF S +KKLRMSR+DI Sbjct: 181 SPVDHHGDQVA-SAMLALIRSVSIQLFAWTCAIFLLVAAADRAWAQHSFIKKLRMSRRDI 239 Query: 227 RDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAP 286 + E K +EGDP ++ + RQ+ A + +A +A+V++ NPTH ++AL YD P Sbjct: 240 KQEHKDNEGDPMLRAQRRQLHEEWANQNAVAAAGRANVLLTNPTHLAIALDYDPEDCPVP 299 Query: 287 KVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAW 345 V AKG G +A +R VP + LAR ++ +E+G IP + A+AE++ W Sbjct: 300 MVAAKGEGPLAAAMRAEAEREGVPIVRNIGLARGVWGESEVGGPIPRDRFDAIAEIILW 358 >UniRef50_Q44760 Flagellar biosynthetic protein flhB n=23 Tax=Borrelia RepID=FLHB_BORBU Length = 372 Score = 154 bits (388), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 100/362 (27%), Positives = 192/362 (53%), Gaps = 21/362 (5%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 S + + +TE PT + +KAREEG++ +S E+ + VS++ + L Sbjct: 18 FSADDEGRTELPTDQKKQKAREEGRVLKSTEINT------AVSLLLLFALFFFMLSYFAL 71 Query: 61 SAGLHFDHSIINDPNLILGQIILL----IREAMLALLPLISGVVLVALISPVMLGGLVFS 116 F I P ++ + + IR M ++ + V ++ G + Sbjct: 72 DLIAVFKEQAIKLPEVMRMSVYTMGFAYIRSIMGYVVLFFFASLAVNFFVNIIQVGFFIT 131 Query: 117 GKSLQPKFSKLN---PLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL 173 KSL+P++ K++ FSA L K++LK +++ + F + ++ ++ +L Sbjct: 132 FKSLEPRWDKISFNFSRWAKNSFFSAGAFFNLFKSLLKVVIICLIYYFIIENNIGKISKL 191 Query: 174 MAESPITAMGNAMDLV---GLCALLVVLGVIPMVG-FDVFFQIFSHLKKLRMSRQDIRDE 229 +E + + G ++ LV +C V+ + +VG FD FQ +++ L+M++++++ E Sbjct: 192 -SEYTLQS-GISIVLVIAYKICFFSVMF--LAIVGVFDYLFQRSQYIESLKMTKEEVKQE 247 Query: 230 FKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVV 289 K+ EGDP ++ RI++ R + +P+ADV++ NP H++VA+++D M APKV+ Sbjct: 248 RKEMEGDPLLRSRIKERMRVILSTNLRVAIPQADVVITNPEHFAVAIKWDSETMLAPKVL 307 Query: 290 AKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 AKG +AL I++I ENNVP +E LARALY + ++ ++IP + + V+++L V+ + Sbjct: 308 AKGQDEIALTIKKIARENNVPLMENKLLARALYANVKVNEEIPREYWEIVSKILVRVYSI 367 Query: 350 KR 351 + Sbjct: 368 TK 369 >UniRef50_Q1MQX2 Translocation protein in type III secretion n=6 Tax=Desulfovibrionaceae RepID=Q1MQX2_LAWIP Length = 360 Score = 153 bits (387), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 112/358 (31%), Positives = 197/358 (55%), Gaps = 16/358 (4%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFG-GVSLARRLSGM 59 MS +S DKTE PTP +L +ARE+G + +S+++ + + + G S+ + G + L + Sbjct: 1 MSGDSGDKTEPPTPKKLREAREQGDVAKSQDVAAAMTMF-GASLYFIGMWQDVFSNLLNL 59 Query: 60 LSAGLHFDHSIIND--PNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 + F H + P I G + A L+P+I+ ++ +A+ + +M G++FS Sbjct: 60 IELPTKFIHLPFEEALPATISG----IASIAFSILIPIIATLMFLAVAADLMQIGVLFSV 115 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 KS PK LNP ++FS + E +K ILK + V ++T + + ++ + + +A Sbjct: 116 KSAIPKLDNLNPKKWFSKVFSIKNLGEFVKNILK-VSVLTITVWIILSNYIKELFAIASG 174 Query: 178 PITAM----GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQS 233 I ++ G+ + + L ++ +V VI + F FQ + + K+ MS+Q+I+ E+K Sbjct: 175 NIWSLWYILGSVLRDLTL-SVSMVFSVIACIDF--MFQKWQYNKRQMMSKQEIKQEYKDM 231 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EGDP +KG+ +Q+ + A + + V KA V+V NP HY++A+ Y++ + P ++AKG Sbjct: 232 EGDPLIKGKRKQLHQEMAMQNPVNKVRKAKVVVVNPIHYAIAIDYEKGRTLLPVILAKGE 291 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 GL+A R+ + E +P ++ PLA +L+ IP L A VAEVL WV L + Sbjct: 292 GLLAQRMVAVAQEEGIPVMQNIPLAHSLFMDGIEDSYIPRNLIAPVAEVLRWVNSLNK 349 >UniRef50_A3NKX0 Type III secretion protein, YscU/HrpY family n=25 Tax=Burkholderia RepID=A3NKX0_BURP6 Length = 352 Score = 153 bits (387), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 101/346 (29%), Positives = 184/346 (53%), Gaps = 10/346 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 SD+KTE PT +L AR +G++ RS +L+ + + + ++ + +++ L Sbjct: 2 SDEKTEEPTDKKLRDARRDGEVSRSTDLSDAVSMSAAILLLVAAADHFGDAMRALVNGAL 61 Query: 65 HF---DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 F DHS++ + ++ A+ A++PL+ L + V+ GL S K + Sbjct: 62 AFVSADHSLVE----MTARLYQFGGIALSAVMPLLFVAALAGIGGSVLQVGLQISLKPVM 117 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 P LNP G+K++FS ++ E +K I+K ++V V + +P + + +SP Sbjct: 118 PNLGALNPAEGLKKLFSPRSAIESIKMIVKAVIVFCVAWKTIVWLFPLIAGALYQSP-PE 176 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGF-DVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + L+VV G+ ++G DV Q F ++K++M++ +++ E K EGDP +K Sbjct: 177 LSRIFREILAKWLMVVAGLCLLMGAADVKLQRFMFMQKMKMTKDEVKRESKNDEGDPLLK 236 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G +++ R A V A+ +V NPTHY+VA++Y ++ P+VVAKG A+ + Sbjct: 237 GERKRLARELAAAPPQHQVAHANFVVVNPTHYAVAVRYAPDEHPLPRVVAKGLDEAAIAL 296 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 R + N+P + PP+ARAL+R + + +P +L+ VA +L W+ Sbjct: 297 RRAAQDANIPIIGNPPVARALFRIG-VEEPVPEELFEIVAAILRWI 341 >UniRef50_P35652 Hypersensitivity response secretion protein hrcU n=8 Tax=Proteobacteria RepID=HRCU_RALSO Length = 357 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 122/370 (32%), Positives = 193/370 (52%), Gaps = 23/370 (6%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 SD+KTE PT +LE A +G+ +S +LT+ +LL G ++ R +L L Sbjct: 2 SDEKTEQPTDKKLEDAHRDGETAKSADLTAAAVLLSGCLLLALTASVFGERWRALLDLAL 61 Query: 65 HFDHSIINDPNLILGQIIL-LIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 D S P + L Q I + +L LP+ LVA I+ G+V S K ++ K Sbjct: 62 DVDSS--RHPLMTLKQTISHFALQLVLMTLPVGFVFALVAWIATWAQTGVVLSFKPVELK 119 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG 183 S +NP G+KR+FS ++ +L+K I+K + V + W ++ LM A Sbjct: 120 MSAINPASGLKRIFSVRSMIDLVKMIIKGVAVAAAV-------WKLILILMPSIVGAAYQ 172 Query: 184 NAMDL--VGLCALLVVL----GVIPMVGF-DVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 + MD+ +G+ L+ +L G+ ++G D Q + ++ RMS+ +++ E K SEGD Sbjct: 173 SVMDIAEIGMTLLVRLLAAGGGLFLILGAADFGIQRWLFIRDHRMSKDEVKREHKNSEGD 232 Query: 237 PHVKGRIRQMQRA-AARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 PH+KG +++ R A + V A +V NPTHY+VA++Y + P+++AKG Sbjct: 233 PHIKGERKKLARELADEAKPKQSVAGAQAVVVNPTHYAVAIRYAPEEYGLPRIIAKGVDD 292 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 AL +RE A +P + PPLAR+LYR ++ +P L+ VAEVLAWV ++ A Sbjct: 293 EALALREEAAALGIPIVGNPPLARSLYR-VDLYGPVPEPLFETVAEVLAWVGEMG----A 347 Query: 356 GGQRPVQPTH 365 G +P H Sbjct: 348 SGTPGAEPQH 357 >UniRef50_A0P0L7 Translocation protein in type III secretion n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P0L7_9RHOB Length = 371 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 102/350 (29%), Positives = 181/350 (51%), Gaps = 18/350 (5%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS--A 62 + +KTE PT +L AR++GQ+ RS++L + + LL ++ +W + ML A Sbjct: 6 TGEKTEQPTHKKLRDARKKGQVARSQDLVTTISLLGVIAYLWLAWDYNFAKFVEMLDIVA 65 Query: 63 GLH---FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 LH F S N + I+++ LPL+ + + G +F+ ++ Sbjct: 66 ALHGAGFRASAFNALQAMFDISIVVV-------LPLLGVGFALGIAGNYFQFGSIFAFEN 118 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHH--WPQMMRLMAE- 176 L+PK ++P G+K++FS + E LK+++K I + SV FF+ P M + Sbjct: 119 LKPKIENISPAKGLKKIFSVKQLVEFLKSLIKIIFL-SVLLFFVIRDAIGPYMNAVQCGL 177 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 +TA+ ++M L L + ++ GFD FQ F H K+L M++ +++ E+K++EGD Sbjct: 178 QCLTAVTSSMLLTTLLFTALAFAIVS--GFDFIFQKFQHKKELMMTKTEVQREYKETEGD 235 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P +KGR +Q+ + + A ++ NPTH++V + Y + P +VAKG L Sbjct: 236 PLIKGRRKQLAQEMVLSDGIDRTRNATAVIVNPTHFAVVIDYKPDIAPLPLIVAKGRNLH 295 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 A +R ++ VP LAR+LY +++G +P + + +A++L WV Sbjct: 296 AHDLRTEAEKHGVPVFRNVLLARSLYAESDVGAFVPDEWFEVIAKILVWV 345 >UniRef50_A4TRY5 Type III secretion apparatus protein n=30 Tax=Enterobacteriaceae RepID=A4TRY5_YERPP Length = 355 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 101/351 (28%), Positives = 181/351 (51%), Gaps = 14/351 (3%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +K E PTP RL++A+E+GQ+ +S E+TS + L+ V G SL + ++ + Sbjct: 2 STEKNEKPTPKRLKEAKEKGQVVKSVEITSGVQLVALVIYFLLTGYSLVEQAKALIRS-- 59 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLI----SGVVLVALISPVMLGGLVFSGKSL 120 SII + + + E M L+ ++ +++V +I+ + G + + K++ Sbjct: 60 ----SIIQLQQPLTLALARIGAECMTVLMHIVVVLGGALIVVTIIAGIAQVGPLLATKAV 115 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 K ++NP+ K++FS ++ EL+K++LK ++ + G+ L + P L Sbjct: 116 SFKGERINPIQNAKQLFSLRSVFELMKSLLKVGVLTLIFGYLLMQYAPSFGYLTHCGSRC 175 Query: 181 AMGNAMDLVG--LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ L+G L +L+ V ++ D FQ ++ +K+L+MS +++ E+K S GDPH Sbjct: 176 ALPVFSTLMGWLLGSLIACYLVFSLM--DYAFQRYTIMKQLKMSHDEVKREYKDSNGDPH 233 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K + RQ+Q +V ++ +V NPTH++V L Y + P V+ KG A Sbjct: 234 IKQKRRQLQHEVQSGSFATNVRRSTAVVRNPTHFAVCLIYHPEETPLPIVIEKGHDEQAA 293 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 I + ++ +P +E LARAL+R G IP Q + VA +L +L Sbjct: 294 LIVSLAEQSGIPVVENIALARALHRDVACGDTIPEQFFEPVAALLRMALEL 344 >UniRef50_D2LD13 Type III secretion exporter n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD13_RHOVA Length = 353 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 116/352 (32%), Positives = 186/352 (52%), Gaps = 14/352 (3%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTS------LLILLVGVSVIWFGGVSLARR 55 + E+D+KTEAP+ RL + ++ P SRE+ S L++ L+ ++ FG V + Sbjct: 4 NSETDNKTEAPSEKRLRDSLDKDGGPSSREVNSAAALFALVLFLMTMAPADFGEV--VKN 61 Query: 56 LSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVF 115 LS + F D IL L I L PL+ ++ L++ Sbjct: 62 LSVFIEDPSGFSLENGADAFFILQLAGLTIFNFAL---PLVLMLLAATLLASFAQNPPTL 118 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 + P ++++P G+KR+F+ +LLK+ +K +V F++ L+ Sbjct: 119 IFNKIAPDLARISPQAGLKRLFAFDAVVDLLKSFIKFGIVA--IAFYVAFQGGAAALLVL 176 Query: 176 ESPITAMGNAMDLVGLCALLVVLGVIPMVGF-DVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 ++ + + + A+L+ ++ DVF+ F L+KL+MSRQD++DE KQSE Sbjct: 177 QTDSASTIELIKRLAFKAILICALACAVLAVADVFWTRFRWLRKLKMSRQDLKDEHKQSE 236 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDP ++ R R + RA RR MM VP A V++ NPTHY+VAL+Y + AP+ +AKG Sbjct: 237 GDPMLRARARAIARARVRRNMMTSVPNATVVIANPTHYAVALRYVRGQDRAPQTLAKGKN 296 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 +ALRIR I +NNVP +E LA++L+ + Q IP + Y AVAEV+ ++ Sbjct: 297 KLALRIRSIAEDNNVPVVENKALAKSLHDAVRVDQPIPHEFYKAVAEVIIYI 348 >UniRef50_Q28JK7 Flagellar biosynthetic protein FlhB n=1 Tax=Jannaschia sp. CCS1 RepID=Q28JK7_JANSC Length = 362 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 117/366 (31%), Positives = 186/366 (50%), Gaps = 41/366 (11%) Query: 1 MSDESDDKTEAP---TPHRLEKAREEGQIPRSRELTSLLI----LLVGVSVI-WFGGVSL 52 MSD+ + P TP +LE AR++G+I RS++L + ++ LL G + W L Sbjct: 1 MSDDDTSPGDKPFDATPKKLEDARKKGEIVRSQDLNTAVMYAGFLLSGAILAPW-----L 55 Query: 53 ARRLSGMLSAGLHFDHSII--------NDP--NLILGQIILLIREAMLALLPLISGVVLV 102 + L + L I + P L+ G LI A + L+P +G++L+ Sbjct: 56 VQNLGQLTQTTLGQAEVIAPLMLGPGGDGPAIGLLSGS---LIASAAIVLVP--AGLLLI 110 Query: 103 ALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFF 162 +L++ L+F+ L PK ++L+P+ K+ + +Q + K+ +K LV + Sbjct: 111 SLLAQR---ALLFTPSKLMPKLNRLSPISNAKQKYGSQGLFQFAKSAVKLALVSIFLAIY 167 Query: 163 LWHHWPQMMRLM----AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLK- 217 LW ++ + + ++D L+VV G+ ++G +F +S L+ Sbjct: 168 LWARAETILASLYGTAGQLLELLGRLSLDF-----LMVVAGMTGIIGIIDWFWEWSQLQL 222 Query: 218 KLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQ 277 + RM+RQ++ DE K +EGDPH+K + R + A +M+ DVP ADV+V NPTHY+VAL+ Sbjct: 223 RNRMTRQEVMDESKSAEGDPHIKQQRRARGQGIAMNQMLGDVPNADVVVVNPTHYAVALK 282 Query: 278 YDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYA 337 +D P VAKG VA RIRE +E VP PP ARAL+ E+G I Y Sbjct: 283 WDRAGGGVPICVAKGVDDVARRIREAASEAAVPIFSDPPTARALHASIEVGAAIQPDQYR 342 Query: 338 AVAEVL 343 AVA + Sbjct: 343 AVAAAI 348 >UniRef50_Q84CR0 Putative type III secretion protein n=3 Tax=Bordetella RepID=Q84CR0_BORPE Length = 349 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 107/351 (30%), Positives = 176/351 (50%), Gaps = 16/351 (4%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PTP RL +RE+G++ SR+ T ++ S+ L ++ A Sbjct: 2 SGEKTERPTPKRLRDSREKGEVAHSRDFTQTALICALFGHFLINAPSILASLRALILAPA 61 Query: 65 HF-DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 F D +L +I+ +A+ L PLI V+ V + + + G+V + + L+P Sbjct: 62 AFADQGFAVALGPVLTEIL---DQAVRVLAPLILIVLGVGMFAEFLQVGVVLAFRKLKPS 118 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG 183 KLNP +K +FSA+ E +K++ K + + + + +M + P + + Sbjct: 119 AEKLNPAGNLKNIFSARNLMEFIKSVCKILFLAVLVTLVIRDSLQPLMAV----PHSGLD 174 Query: 184 NAMDLVGLCALLVV------LGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 VG ++V G I + D+ +Q + + K LRMS+ +++ E+K+ EGDP Sbjct: 175 GLRTGVGRILQVMVWNIGLAYGAISLA--DLAWQRYQYRKGLRMSKDEVKQEYKEMEGDP 232 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 H+K + + + + A V +A V+V NPTH +VAL Y + P+V+A G G VA Sbjct: 233 HIKQQRKHLHQELIMHGAAAQVRRATVLVTNPTHLAVALYYAAGETPLPRVLAMGQGAVA 292 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 + E + VP ++ LARAL+ AE+ Q IPG+L VA VL V Q Sbjct: 293 ALMVEAARDAGVPVMQNVALARALHDQAEVDQYIPGELVEPVAAVLRAVRQ 343 >UniRef50_A5G0E6 Type III secretion exporter n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0E6_ACICJ Length = 335 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 104/324 (32%), Positives = 178/324 (54%), Gaps = 8/324 (2%) Query: 29 SRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREA 88 SRE+ +L L V ++V+ S A RL+ L++ F + D L + + A Sbjct: 9 SREVATLASLGVALAVMIGVLPSSAERLANTLASA--FTRAATVDSGAGLSRALWQAGMA 66 Query: 89 MLAL-LPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLK 147 L + +P + L A++ ++ G + ++ F++LNPL GI ++F A + Sbjct: 67 SLGVFIPFAGAIALSAIVVSLLQTGFRTNWGAIGLNFARLNPLAGIGKLFGTPNLAASGQ 126 Query: 148 AILKTILVGSVTGFFLWH--HWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVG 205 +ILK +G+ + H + M L +E + A + L A +++ V V Sbjct: 127 SILKLAAIGAALYVVMDARLHGLEAMLLGSEKTLLAAIFGSIVAILSAAVMIQVVSGAVD 186 Query: 206 FDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVI 265 F + FS ++MSRQ+++DE K+++GDPHV+ RI+ + A A+R + + +A V+ Sbjct: 187 FVLVRNRFS--TSVKMSRQEVKDEQKETDGDPHVRARIKAARSALAKRSLNVAMARAAVV 244 Query: 266 VNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHA 325 + NPTHY+VAL+Y + APK+VAKGA A RIR++ E +P + PPLARAL++ Sbjct: 245 ITNPTHYAVALEYRAGQAEAPKIVAKGADERAARIRDLAREARIPIVANPPLARALFQQ- 303 Query: 326 EIGQQIPGQLYAAVAEVLAWVWQL 349 ++ +I + Y AVAE++A++W+L Sbjct: 304 DVETEILPEHYRAVAEIIAYIWKL 327 >UniRef50_Q6MD75 Putative type III secretion pathway protein sctU n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD75_PARUW Length = 357 Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 108/355 (30%), Positives = 188/355 (52%), Gaps = 22/355 (6%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 DKTE TP +L+ A+++GQI +S++L + + V++I SL +L+ L Sbjct: 3 DKTEKATPKKLKDAKKKGQIAKSQDLPTAFTFIASVAIILALASSLYHQLANFLVGTFR- 61 Query: 67 DHSIINDPNLILGQIILLIREA----MLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 +N P L G I+ L +A LA +P ++ V LV + + G VF+ + + Sbjct: 62 ---SVNTPEL-SGVIVNLFYKANEVIFLASIPTMALVALVGVTITFLTVGPVFAPEVFKF 117 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 K NP+ +K F +T ELLK+++K + + +++ P +++ ++ PI+ Sbjct: 118 DIKKFNPVDNLKAKFKLKTLVELLKSVIKISIASYLIYKVMYNSIPVLIQTVS-MPISGA 176 Query: 183 GNAMDLVGLCALLV--VLGV----IPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 L+ A LV VL V I + D +Q + K++ M + +++ E+K SEGD Sbjct: 177 -----LIVFHAFLVEVVLKVGLFFIVVAVADFIYQKKTFAKEMMMEKFEVKQEYKNSEGD 231 Query: 237 PHVKGRIRQM-QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 PH+KG+ RQ+ Q A + V +A +V NPTH ++A+ Y+ + +AP ++A G + Sbjct: 232 PHIKGKRRQIAQEIAYQEGPTGGVKRAQAVVTNPTHLAIAIGYERHMDAAPYILAMGKDV 291 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +A RI +I +N++P L LA L+ EI + +P Y A+AE++ W+ LK Sbjct: 292 LAERIVKIAEKNDIPVLRNITLAHILWEQGEIYEYVPEDTYEALAEIMRWIASLK 346 >UniRef50_A7H8A9 Type III secretion exporter n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7H8A9_ANADF Length = 343 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 114/346 (32%), Positives = 176/346 (50%), Gaps = 7/346 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + D+TE PTP RL +AR G + + REL L G+ + G S+ R L+ +L A L Sbjct: 2 TGDRTERPTPKRLREARRRGDVAQGRELGGAAALAGGLLALALTGPSMTRELASLLRAQL 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 DP +L ++ + LA ++A G VF+ +L P+ Sbjct: 62 QAAAQPSADPAALLHAALVTVGRLALAPASAALAAAVLAGALQT---GFVFAPGALSPRA 118 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 ++NPL G++R+ S + +L + K ++ V +L P + L A A+ Sbjct: 119 ERVNPLRGLRRLLSPASALAVLLGLAKAAVLLGVAVVWLRSAAPSLAGL-ARLDARALWG 177 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 ++ ++G +V + DV F H + LRM+R ++R E K+ EGDP + R Sbjct: 178 SLPMLGGLVARLVAAYALLALGDVALARFRHRRALRMTRDEVRREHKEDEGDPAHRAERR 237 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 ++ RA V +A V+V NPTH +VAL++D + AP+VVAKG+G A RIR Sbjct: 238 RLHRALLE---AGPVSRATVVVVNPTHVAVALRHDRDGEDAPRVVAKGSGPAAARIRSAA 294 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 VP + PLARAL+R AE+G +IP +LY A A VLA ++ L+ Sbjct: 295 RRAGVPIVRDVPLARALHRLAEVGDEIPEELYEAAAAVLAHLYGLE 340 >UniRef50_B8HEI9 Type III secretion exporter n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HEI9_ARTCA Length = 359 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 131/358 (36%), Positives = 186/358 (51%), Gaps = 22/358 (6%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD S ++TE T R+ R +GQ+ RS++LT+ L GV G V L + Sbjct: 1 MSD-SQERTEQATDKRMRDVRSKGQLSRSQDLTAWL----GVGA---GAVMLPATIDRAS 52 Query: 61 SAGLHFDHSIIN-----DPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVF 115 +A + S+ DP + + L + L P+ V LV L + GG+ F Sbjct: 53 NAAVDQVFSVRAIMESPDPAKAVHALELGLGSMAGVLAPMFVVVFLVVLAGSAVQGGVHF 112 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 K + +F N L G+KR+F Q LKA+LK ++VG V + P L+ Sbjct: 113 --KKFRAEFEHFNLLSGMKRLFGMQAVWGGLKALLKAVVVGIVLYSVVQGLIPV---LLT 167 Query: 176 ESPITAMGNAMDLVGLCALLV---VLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQ 232 + G LV V + + DV + + KK RMS++++ DE K Sbjct: 168 AGGLPVSGVIAAAADGIGALVQCAVAAGLVLAAVDVLVVMRRNRKKTRMSKKEVTDENKN 227 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 +EGDP V+ R Q A +R RM+A + ADV++ NPTH +VAL+YD K SAP+VVAKG Sbjct: 228 TEGDPLVRSHRRSRQLAMSRNRMIAAIADADVVLVNPTHVAVALKYDAGK-SAPRVVAKG 286 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 AG++A RIR VP ++ PLARAL+ E+GQ+IP +LY AVA VLA+V LK Sbjct: 287 AGVIAARIRAEAEAKEVPMVQDIPLARALHSACELGQEIPVELYRAVAGVLAFVMSLK 344 >UniRef50_Q1D0P0 Type III secretion protein, FlhB/HrpN/YscU/SpaS family n=2 Tax=Cystobacterineae RepID=Q1D0P0_MYXXD Length = 349 Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 115/344 (33%), Positives = 172/344 (50%), Gaps = 19/344 (5%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE P+ RL +AR +GQIPRSR L + + G+ FG + A GM Sbjct: 2 SGEKTEKPSAKRLREARRKGQIPRSRLLNASAVTAGGL----FGLTAAAP--VGMARLQA 55 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 +H + +L Q L I P++ G AL+ V GL + ++PK Sbjct: 56 WTEHLFLGQQDLGAWQEGLWIAARFCG--PVLGGAFAAALLVSVATVGLEADLQHVEPKL 113 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM----AESPIT 180 +++ + G++R+FS + EL K +L LVG++ + P M+ AE Sbjct: 114 ERISLVAGMQRLFSWRPWVELAKTLLIVCLVGALVWSDVEEAAPDAMKTAWLGGAEGLSL 173 Query: 181 AMGNAMDLVG-LCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ + L L LLVVLGV D H+K L M+R++++ E+K SEGDP Sbjct: 174 AVAHVSGLASRLACLLVVLGV-----GDYALAWRRHIKDLMMTREEMKREYKDSEGDPRH 228 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KG+ + + R A+ V KA +V NPTH +VAL+YD ++ AP +VAK A Sbjct: 229 KGQRKALHRQLAQGGAARGVQKATAVVVNPTHIAVALRYDVDECEAPYLVAKAREGDARA 288 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVL 343 +RE + + PLAR+L H ++G+ IP +LY A A VL Sbjct: 289 MREQARRLGIAVVRDIPLARSLI-HYDVGEPIPEELYQAAAVVL 331 >UniRef50_Q0C5I7 FlhB/HrpN/YscU/SpaS family protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C5I7_HYPNA Length = 357 Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 108/355 (30%), Positives = 177/355 (49%), Gaps = 15/355 (4%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSL-LILLVGVSVIWFGGV---SLARRLSGM 59 +S +K + RL AR++G +P+S+E + LIL + ++ + V L S + Sbjct: 7 DSGEKEFDASEQRLRDARKDGDVPQSKEANAFALILGILIAALILDAVVGPKLFDDFSRI 66 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L G F I G I +LAL PL+ + + L++ ++ + FS K Sbjct: 67 LYHGDAFAADIFEGDG---GATWAWIATTLLALSPLLLVMAALVLVALIIQQSIAFSAKK 123 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + P K+NP+ IK + + + LK +K + + FL Q R S Sbjct: 124 IMPDMKKINPVDNIKNKYGTKGLTDFLKDTVKMLFAAGLGTLFL----IQFTRDYYGSSS 179 Query: 180 TAMGNAMDLVGLCALLVVLGVIP----MVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 + L ++L + D+ Q H KLRM+R+D++ E KQSEG Sbjct: 180 VDTADFYQFTFNQTLRLILYFFAFQFVLAALDLPLQWRIHSHKLRMTREDMKKEMKQSEG 239 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DPH++ + R+ +R +M+ +V A V++ NPTHY+VAL++D + AP VAKG Sbjct: 240 DPHMRQQRREKATKISRGQMLQNVKSATVVMVNPTHYAVALKWDPDSKLAPVCVAKGTDH 299 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +A++IRE+ ENNVP PP R++Y E+ Q+I + +AAVA + +V +L+ Sbjct: 300 LAMKIRELAIENNVPIYSDPPATRSIYSMVEVDQEIQAEHFAAVAAAIQFVDRLR 354 >UniRef50_A6GN26 Type III secretion component protein SctU n=1 Tax=Limnobacter sp. MED105 RepID=A6GN26_9BURK Length = 353 Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 113/354 (31%), Positives = 180/354 (50%), Gaps = 28/354 (7%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML---- 60 S +KTE PT +L+ AR++GQ+ S++ L LL+ ++ A R S +L Sbjct: 2 SGEKTEKPTQKKLDDARKKGQVSVSKDAQILFKLLMFYMFFFWLSQDYAARFSELLDLIV 61 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLAL-LPLISGVVLVA-LISPVMLGGLVFSGK 118 +AGL P I + + +A+ +PL++ + A LI+ +G LV S + Sbjct: 62 TAGL-------KQPWTFSESIFSMFFDLFVAITVPLVAVCAIAATLITWAQIGFLV-SPE 113 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +L P F K + + IK MFS ++ +LL +I+K +L+ SV G+ ++ M + Sbjct: 114 ALTPSFKKFDAVSNIKNMFSKKSLVQLLLSIVK-VLILSVVGYLVFKDNMGDMIYSYRAG 172 Query: 179 ITAMGNAMDLVGLCAL---LVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 +T + + V + L++ VI ++ + V + H+K LRMS QDI DE KQS G Sbjct: 173 LTQFFDVLVHVLKAIIFVSLIIFMVIAVIDWSV--EYMHHIKNLRMSHQDIADERKQSMG 230 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 +P +K R+++ R+ + V A IV NPTH SVAL Y+ K P ++A G Sbjct: 231 NPQLKQRMKREHRSILNSSL-TRVAGAKAIVANPTHISVALDYEPGKHDLPYILAMGTDD 289 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQI-------PGQLYAAVAEV 342 ALRIRE +N +P + LAR LY+ E + I Q++ AV E+ Sbjct: 290 EALRIREFAKKNGIPIIVNVKLARMLYQDCEEDEYIQREHLELAAQVFRAVMEM 343 >UniRef50_A3P7C2 Type III secretion protein, YscU/HrpY family n=37 Tax=Burkholderia RepID=A3P7C2_BURP0 Length = 420 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 104/349 (29%), Positives = 182/349 (52%), Gaps = 33/349 (9%) Query: 17 LEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNL 76 L+K RE+GQ+ +S+++ + L + V+ L LS + L F P Sbjct: 74 LKKVREKGQVAKSKDIADAMTLAAAIGVLTACESMLTGGLSRAVRTALDFVRGE-RTPQA 132 Query: 77 ILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRM 136 L + L A+L +LP ++ ++ ++S G + + + + PKF +NP+ GIKR+ Sbjct: 133 TLAALHDLAASAVLTMLPFVAAAIVAGIVSQAPQAGFLITLEPVMPKFDAINPMAGIKRI 192 Query: 137 FSAQTGAELLKAILKTILVGSV-----TGFF------LWHHWPQMMRLMAESPITAMGNA 185 FS ++ EL+K I+K +++ V T F ++ PQ+ R++ T + Sbjct: 193 FSLKSLLELVKMIVKALVLACVAWKMMTSLFPLVVASVYEATPQLARVL----WTVL--- 245 Query: 186 MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQ 245 M L+G +++V + + + +F +++ RM++++++ E K+S+GDPH KG R+ Sbjct: 246 MKLLGTVSVVVAVLA--AADYKIARVMF--VRENRMTKEEVKREHKESDGDPHTKGERRR 301 Query: 246 MQRAAA-----RRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 + R A R+R V +A+V+V NPTHY+VA++Y ++ P+V+ K AL + Sbjct: 302 LAREIATSAPPRQR----VGQANVLVVNPTHYAVAIRYAPDEHPLPRVIEKAVDDGALAL 357 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 R VP + P +ARALYR E IP +L+ VA +L WV L Sbjct: 358 RRHAHALGVPIVGNPSVARALYR-VERDASIPEELFETVAAILRWVESL 405 >UniRef50_A4WVT4 Type III secretion exporter n=4 Tax=Rhodobacteraceae RepID=A4WVT4_RHOS5 Length = 359 Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 121/359 (33%), Positives = 194/359 (54%), Gaps = 6/359 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ +DK P+ +LE+AR +G++P+S++L + + G +R+ M Sbjct: 1 MSEGDEDKPHEPSQRKLEEARRKGELPKSQDLVTAASYGGLLLAALGLGQGAIQRMGDMG 60 Query: 61 SAGL-HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 ++ L D + Q+ L+ +L +LP + L A+ + V LV + Sbjct: 61 TSLLGQADRFSTLLSDKAQPQVGGLLVSVLLTVLPFFAIPALAAVAALVAQRALVVAPTK 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L PK +++P+ G + F E K+++K +LV V F+ H M+ ++A +P Sbjct: 121 LAPKTERISPVSGFRNRFGRNGLFEFAKSLVKLLLVAVVFALFITFHMAGMLDMLAMAPG 180 Query: 180 TAMGNA-MDLVGLCALLVVL-GVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 A+G M ++ A++V+L G I ++ D F+Q HL++ RMSR+++ DE K +EGDP Sbjct: 181 LAVGRMFMLMLEFLAIVVLLSGGIGLI--DYFWQRAEHLRRHRMSRKELTDEAKDAEGDP 238 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 HVK + RQ A RM+ DV ADV+V NPTHY+VAL++ AP VAKG +A Sbjct: 239 HVKAQRRQKAMEIATNRMLQDVVGADVVVVNPTHYAVALRWKRGDRRAPLCVAKGTDEIA 298 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 RIRE AE VP PP ARAL+ +G++I + Y AVA + + +++R R+ G Sbjct: 299 ARIRERAAEAGVPIHRDPPTARALHAAVRVGEEIRPEHYKAVAAAIRFSERIRR-RMKG 356 >UniRef50_Q04SD5 Endoflagellar biosynthesis protein n=4 Tax=Leptospira RepID=Q04SD5_LEPBJ Length = 510 Score = 140 bits (354), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 105/356 (29%), Positives = 185/356 (51%), Gaps = 15/356 (4%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 E + +TE + R + RE+G +P+S EL + ++LL GV +I+ G R +L Sbjct: 160 EDEGRTEPGSERRRREEREKGNVPKSPELPAAVVLLAGVILIYLMGEYFFMRTFYILR-- 217 Query: 64 LHFDHSIINDPNLILGQIILLIREAMLALL----PLISGVVLVALISPVMLGGLVFSGKS 119 + H + ++ + L++ A L PL+ + A+I V G +F+ ++ Sbjct: 218 -KYIHGVGQRTDISSESVTELLKNASTDLFTLLWPLLGITFVGAVIGNVAQVGFIFTPRA 276 Query: 120 LQPKFSKLNPLPGIKRMF-SAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L FS++ P K++ + QT L K++ K L+ V+ + + + L++ Sbjct: 277 LSFNFSRIRP--NFKKVLPTRQTLFNLGKSLAKVGLIAWVSYIIISKDFFSI--LISGEM 332 Query: 179 ITAMGNAMDLVGLCALLVVLGVI--PMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 A+ + + +V+G+I + D +Q + + + L+M+ + + E K+S+GD Sbjct: 333 GLEQAVALVMSSSFKIFLVVGIILLAISIVDYLYQRYEYEESLKMTPSEAKREAKESDGD 392 Query: 237 PHVKGRIRQMQR-AAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 ++ R RQ+ R +R+M+A VP+ADV++ NPTH++VAL+Y AP V+AKG Sbjct: 393 RSLQARRRQLARDMMNKRKMLAKVPEADVVITNPTHFAVALEYKPGIHKAPIVIAKGVDD 452 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 AL I I EN VPT+E AR LY E+G ++P Q Y A+A +L+ + +R Sbjct: 453 FALLIIRIARENGVPTVEDRIQARGLYEEVELGAEVPQQFYRAIATILSRLESFRR 508 >UniRef50_C4PLU4 Type III secretion system inner membrane protein n=14 Tax=Chlamydiales RepID=C4PLU4_CHLTZ Length = 360 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 106/363 (29%), Positives = 174/363 (47%), Gaps = 31/363 (8%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE TP RL AR++GQ+ +S++ S + +V + + + A L L + F Sbjct: 3 EKTEKATPKRLRDARKKGQVAKSQDFPSAITFIVSMFLTFSLASFFAEHLGSFLVS--IF 60 Query: 67 DHSIIN-DPNL---ILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 + N DP+L L ++LI + LPL+ V V L+ ++ G FS + +P Sbjct: 61 KTAPQNHDPHLAVYYLKNCLILI---LTVSLPLLGAVGFVGLLIGFLIVGPTFSTEVFKP 117 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP---- 178 K NP+ +K+ F +T ELLK+I K S L+ + L+ E+ Sbjct: 118 DLKKFNPIDNLKQKFKVKTFIELLKSIFKI----SGAALILYIVLKNRVELVIETAGIPP 173 Query: 179 -ITA------MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFK 231 +TA + A+ +G+ L+V + D+ +Q S K+L+M + +++ EFK Sbjct: 174 LVTAQVFKEILYKAVTSIGIFFLVVAV-------IDLVYQRHSFAKELKMEKFEVKQEFK 226 Query: 232 QSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAK 291 +EG+P +KGR RQ+ + A + + A +V+NP +VA+ Y K AP ++A Sbjct: 227 DTEGNPEIKGRRRQIAQEIAYEDTSSQIKHASAVVSNPKDIAVAIGYMPEKYKAPWIIAM 286 Query: 292 GAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 G L A RI + VP + PLA L + + IP Y AV E+L ++ L Sbjct: 287 GVNLRAKRIIAEAEKYGVPIMRNVPLAHQLLDEGKELKFIPETTYEAVGEILLYITSLNA 346 Query: 352 WRL 354 L Sbjct: 347 QNL 349 >UniRef50_C6CGR8 Type III secretion protein, YscU/HrpY family n=22 Tax=Gammaproteobacteria RepID=C6CGR8_DICZE Length = 361 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 116/356 (32%), Positives = 184/356 (51%), Gaps = 21/356 (5%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM--LSAGL 64 +KTE PTP +L+ AR++G++ +S+++ LLI + +I LA SGM L A + Sbjct: 3 EKTEKPTPKKLQDARKKGEVGQSQDVPKLLISFALLEMI------LALTDSGMSKLQALM 56 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPL--ISGVVLVALISPVMLGGLVFSGKSLQP 122 S I+DP + A+LA L IS +L+ ++ + G +F+ ++L+ Sbjct: 57 QLPLSRISDPFGHAADEVFSEALALLATFCLLTISVALLMRIVGGWIQYGPLFAVEALKL 116 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL--MAESPIT 180 F++LNP+ IK+MF+ + ++L +LK +G V F PQ+ L +A +T Sbjct: 117 DFNRLNPINQIKQMFTMRKLTDMLTNLLKATTIGLV---FWLVVTPQLEWLVELAYGDLT 173 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVG-FDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A ++ V L + +G FD Q + LK+ RMS +DIR+E+K SEGDPH+ Sbjct: 174 AFWKGVENVLKSVSRTTLSALLALGVFDFGLQKYYFLKQQRMSHEDIRNEYKNSEGDPHM 233 Query: 240 KGR----IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 KG +++ A R+ V AD+++ NPTHY+VAL Y K P+++ KG Sbjct: 234 KGHRKSVAQEILNEPASPRVKPKVEDADLLLVNPTHYAVALFYRPGKTPLPRILLKGEDD 293 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 A + + VP + LAR LYR E G IP VA+V + QL++ Sbjct: 294 HARALIARAHQAGVPVIRFIWLARTLYRVPE-GHYIPRDTLQPVAQVYKVLRQLEK 348 >UniRef50_O85640 Secretion system apparatus protein SsaU n=26 Tax=Enterobacteriaceae RepID=O85640_ECOLX Length = 345 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 93/344 (27%), Positives = 177/344 (51%), Gaps = 16/344 (4%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PTP +L +++G + +S E+ + + L+ S G+S + G+++ + Sbjct: 3 EKTEKPTPKKLRDLKKKGDVTKSEEVMAAVQSLILFSFFSLYGMSFFVDIVGLVNTTI-- 60 Query: 67 DHSIINDPNL-----ILGQIILLIREAMLALLPLISGVVLVALISP-VMLGGLVFSGKSL 120 +N P L ILG ++ + +L +LP IS +V V ++ V G +F+ + + Sbjct: 61 --DSLNRPFLYAIREILGAVLNIF---LLYILP-ISLIVFVGTVTTGVSQIGFIFAVEKI 114 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWP-QMMRLMAESPI 179 +P K++ +K +FS ++ ELLK++ K +++ + +F+ H + + + Sbjct: 115 KPSAQKISVKNNLKNIFSVKSIFELLKSVFKLVII-VLIFYFMGHSYANEFANFTGLNAY 173 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ V L V+ G + FD +FQ LKK++MS+ +++ E K ++G+P + Sbjct: 174 QALVVVAFFVFLLWKGVLFGYLLFSVFDFWFQKHEGLKKMKMSKDEVKREAKDTDGNPEI 233 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KG R++ + ++ K+ VIV NPTH ++ L Y + P V+ G AL+ Sbjct: 234 KGERRRLHSEIQSGSLANNIKKSTVIVKNPTHIAICLYYKLGETPLPLVIETGKDAKALQ 293 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVL 343 I ++ ++P +E PLAR LY++ GQ I + VA+++ Sbjct: 294 IIKLAELYDIPVIEDIPLARTLYKNIHKGQYITEDFFEPVAQLI 337 >UniRef50_D0ZDM3 Type III secretion apparatus protein n=5 Tax=Edwardsiella RepID=D0ZDM3_EDWTE Length = 352 Score = 137 bits (344), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 109/350 (31%), Positives = 184/350 (52%), Gaps = 26/350 (7%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWF--GGVSLARRLSGMLSAG 63 +KTE PT RL AREEGQ+ +S+++++ + L V ++W G +L + G + A Sbjct: 2 SEKTEQPTAKRLRDAREEGQVAKSQDISATVQL--AVILLWMVTEGPTLYAAIGGFIDAT 59 Query: 64 LHFDHSIINDP-----NLILGQIILLIREAMLALLPLIS-GVVLVALISPVMLGGLVFSG 117 L + +N P L+ G+ L+ + +L L++ ++L L+ G +F+ Sbjct: 60 L----ATLNLPLPDAIALLTGKAAALVVRFVFSLAALLAVTLILTGLVET----GFLFAP 111 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHH---WPQMMRLM 174 K++ P ++NPL K+M S EL K +LK +++G +F+ + + Q++R Sbjct: 112 KAIMPSAERINPLNNAKQMVSLLKLFELGKMVLKIVILGLTFTYFIRGYAASFAQLVRAD 171 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKK-LRMSRQDIRDEFKQS 233 AE+ + + + M L LL++ + +V + + ++ HL+K L MS +DI+ EFK + Sbjct: 172 AEAGLW-VTSKMTLWMWGILLLLTALFAVVDYSMQYR---HLRKQLMMSHEDIKQEFKNA 227 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EG P +K R R++ R + V A V+V NPTH +V L+Y E + P+VV G Sbjct: 228 EGSPEIKQRRRELHREIQSGSLADSVSSASVVVRNPTHIAVCLRYCEGETPLPQVVEYGR 287 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVL 343 G A I + +P +E PLARAL G +P L+ AVA++L Sbjct: 288 GARARHIVALAEARRIPVVENIPLARALIATTRPGDYVPEALFVAVAQLL 337 >UniRef50_A3VS81 Flagellar biosynthetic protein FlhB n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VS81_9PROT Length = 355 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 108/362 (29%), Positives = 186/362 (51%), Gaps = 24/362 (6%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVS-----LARRLS 57 DE++ EA TP R+++AR++G + +S E+ + +G+ V G VS +A L+ Sbjct: 6 DEAEKSHEA-TPERIKQARQKGDVAQSPEVL-VFARYLGILVALLGFVSALAMNMATSLN 63 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 ++ +++D + + G + L L++ + + + + LVF+ Sbjct: 64 VFMARPFEASARLMSDADPLEG-----FGSSALFFFALMAAPIALVIAGLIAQQALVFAP 118 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILK---TILVGSVTGFFLWHHWPQMMRLM 174 ++P +KLNP+ K+ F + ++ +K ++VG V G Q RL Sbjct: 119 NKIKPDLNKLNPVKNAKQKFGKAALTDFVRNTVKITIVMVVGMVIGL------AQTGRLT 172 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVI---PMVGFDVFFQIFSHLKKLRMSRQDIRDEFK 231 A A +L GL ++V+ GVI G D+ + + ++L+MSRQ+++DE K Sbjct: 173 ASVGAPPGLLAEELAGLARIMVITGVILAAIAAGIDLPIKWSQYRERLKMSRQELKDETK 232 Query: 232 QSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAK 291 +EGDP + ++ R A+ R + DVP ADV+V NP HY+VALQ++ ++ P+ +AK Sbjct: 233 STEGDPAQRSERQKRAREIAQNRQLLDVPDADVVVVNPEHYAVALQWNRHRGEVPRCIAK 292 Query: 292 GAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 G +ALRIR I E VP AR+LY E+G++I + Y AVA + + +L+ Sbjct: 293 GVDAIALRIRNIADEAGVPLYRDVQTARSLYAVVEVGEEIRYEHYEAVAAAIRFADKLRA 352 Query: 352 WR 353 R Sbjct: 353 KR 354 >UniRef50_C8BNV0 HrcU n=6 Tax=Gammaproteobacteria RepID=C8BNV0_PSESY Length = 362 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 107/354 (30%), Positives = 179/354 (50%), Gaps = 22/354 (6%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFG--GVSLARRLSGMLSAGL 64 +K + TP ++ AR+ GQ+ +S++L LLIL+V VS I G VS+ + S + + Sbjct: 3 EKNQDATPKQIRDARKRGQVAQSQDLPKLLILVV-VSEITLGMADVSMEKLQSLIKLSMT 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 D + ++ Q + L+ A A+L + +L+ L+ M G++F+ ++L+P Sbjct: 62 RMDQPFLRTVGEVVTQGVWLV--AAFAVLS-VGVAMLMRLLGSWMQFGVLFAPEALKPSM 118 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNP +K+MF+ ++ L I+K ++ V + ++ L+ S + + Sbjct: 119 EKLNPFSHLKQMFTLRSLTTSLSGIIKAAIIAVVMWMIVEPALGTLVSLV-HSDLVTFWH 177 Query: 185 AMD------LVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ L C +L+VL V D Q + H K+LRMS +DI+ E+K SEG+P Sbjct: 178 ALSKLFHQILRVTCGILLVLAVA-----DFAIQKYFHAKQLRMSMEDIKQEYKNSEGNPE 232 Query: 239 VKGRIRQMQRAAARRRMMAD---VPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 +KG RQ+ + A V ADV++ NPTHY+VAL Y + + P++ K Sbjct: 233 IKGHRRQLAHELLNQAPKAPPKPVKDADVLIVNPTHYAVALYYRPGETALPRIHCKNIDA 292 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 AL + E +P ++ LAR LYR + + IP AVA++ + QL Sbjct: 293 GALALIEEAKRERIPVVQCIWLARTLYRVPQ-DRFIPRDTLQAVAQIYGVIKQL 345 >UniRef50_B1K591 Type III secretion exporter n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K591_BURCC Length = 357 Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 103/351 (29%), Positives = 179/351 (50%), Gaps = 17/351 (4%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 SD+KTE PT +L++AR++G + +S +L + +++LV +++ F L L +S + Sbjct: 2 SDEKTEQPTRRKLKEARKKGTVAKSVDLVAAVLVLVSLALFTFAWHPLLDALHQNISRAI 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F S + + ++ + +A + L A +S GL S + PK Sbjct: 62 DFCGSE-RSMHTLWSVLMHELANGAIACCAISVAAALAAALSIGAQVGLQVSFDPVMPKM 120 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 +L+P G+K++FS + +LLK +K +++ + + +P + MAE P+ A+ Sbjct: 121 DRLSPAAGLKQIFSKRALIDLLKMSVKAVVIAAALWHVIVSLFPLITSAMAE-PLAALSQ 179 Query: 185 AM------DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + L L +V+GV+ D Q + ++ RMS+ +++ E K+ EG+P Sbjct: 180 ILWHALLKLLFAAAVLFLVVGVV-----DWKIQHWLMMRAQRMSKDEVKRELKEREGEPK 234 Query: 239 VKGRIRQMQRAAAR---RRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 +K R+ + + V +A+V+V NPTHY+VAL+Y + P V+AKG Sbjct: 235 LKHERRKRAKELVNGGGESLSGAVGRANVVVVNPTHYAVALRYVRGETPLPVVLAKGIDD 294 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 A IR + + VP + PP+ARALY AE + IP +L+ VA +L WV Sbjct: 295 AAREIRALATQRGVPIVANPPVARALYEVAE-HRPIPSELFEVVAAILRWV 344 >UniRef50_Q93PY9 RscU n=4 Tax=Pseudomonas RepID=Q93PY9_PSEFL Length = 365 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 104/351 (29%), Positives = 178/351 (50%), Gaps = 23/351 (6%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD S +K + +L R++GQ+ +S+++ LL L + F + +R ++ Sbjct: 1 MSD-SGEKKHPASAKKLRDQRKKGQVAQSQDVAKLLALTAISEIALFTAETSLQRFQQLM 59 Query: 61 SAGLHFDHSIINDP-NLILGQIILLIREAMLALLPLISGVVLVA-LISPVMLGGLVFSGK 118 L S + P L +++ + ++ GV + LIS M GL+F+ + Sbjct: 60 LLPL----SRLTQPFTRALEEVLFEGMTVFFSFALVMVGVAITTKLISSWMQFGLLFAPE 115 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +L+ F++LNP+ +K+MFSAQ LL +I K L+ S+ +W ++ L A S Sbjct: 116 TLKLDFNRLNPISQVKQMFSAQQLMNLLMSIAKACLIASILYVVIWPSLDTLINL-ATSD 174 Query: 179 ITAMGNAM-----DLVGLC-ALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQ 232 + + A+ L+ +C +L+VL +I ++ FF K++RM++ ++ E+K Sbjct: 175 LQSYILALIALFRHLLHVCLGMLLVLALIDLIMVRHFFA-----KRMRMTQVEVVKEYKD 229 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPK---ADVIVNNPTHYSVALQYDENKMSAPKVV 289 EGDPHVKG+ R + A+ +PK +D++V NPTH++VAL Y K P +V Sbjct: 230 MEGDPHVKGQRRSLAYQLAQEEPKVKLPKLEESDMLVVNPTHFAVALYYRPGKTPLPMLV 289 Query: 290 AKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVA 340 +KG A + +VP ++ LAR LY ++G IP + AVA Sbjct: 290 SKGTDDEARTLIRRAKAADVPVIQCVWLARTLYTK-KLGASIPRETLRAVA 339 >UniRef50_C9NP54 Type III secretion protein HrpY n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NP54_9VIBR Length = 352 Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 100/342 (29%), Positives = 171/342 (50%), Gaps = 12/342 (3%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT +++ +R+ GQ+ ++ ++ LL ++ V+ V+ + L L ++ Sbjct: 3 EKTEKPTQKKIQDSRKRGQVAQTPDIPKLLACVLTFEVL----VACSEWLMAELKTLVYM 58 Query: 67 DHSIINDP--NLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 ++ N P + L + + L +L +I ALI G +F+ ++L+ F Sbjct: 59 PITLFNQPFEHGFLSVLEVAKHVLFLFILIVIPVSFFAALIGRWGQFGFLFAPEALKLDF 118 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG- 183 +KLNP +K++FS Q E+L I K+IL+ V + L + + + P+ M Sbjct: 119 NKLNPFSQLKQLFSGQKLTEVLNNIFKSILI-FVVFYILLNDLAHAVFKLPNLPLDRMWL 177 Query: 184 NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRI 243 A+DL A + +L ++ D + F HLK+L+M +Q+++ EFK SEGDP VK + Sbjct: 178 AAIDLFIYVARVCLLLLLAPAILDFALKKFFHLKQLKMDKQEVKQEFKDSEGDPFVKSQR 237 Query: 244 RQMQRAAAR---RRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RQ+ + A + + D++V NPTH++V L Y+ P V AKG AL + Sbjct: 238 RQLGMELVEGSPQTTNASMDEMDMLVVNPTHFAVGLHYNPGVTPLPVVGAKGKDREALEL 297 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEV 342 + + VP + LAR LY+ E+G I AVA + Sbjct: 298 IQQADHSGVPVIRYVWLARTLYQQ-ELGSYINRDTLDAVASL 338 >UniRef50_Q2NR69 Type III secretion apparatus n=5 Tax=Enterobacteriaceae RepID=Q2NR69_SODGM Length = 352 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 99/349 (28%), Positives = 170/349 (48%), Gaps = 25/349 (7%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL-- 64 +KTE PTP RL A ++GQ +SR++ ++L GV W + L + + Sbjct: 3 NKTEKPTPKRLRDAAKKGQAFKSRDVIIACMMLCGVC--WLTSFTSLESLMDLYRQMVVG 60 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLIS-GVVLVALISPVML-GGLVFSGKSLQP 122 +F S+ N L+ A+ LLP+I+ G+V AL P++L G + + ++ + Sbjct: 61 NFSLSLTAYRNA-------LMFTALQILLPIIAMGIVASAL--PLLLQTGFMLATRAFKL 111 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMM--RLMAE-SPI 179 F LNP GIK++FS +T + +KA+L + ++ +W Q++ +L A I Sbjct: 112 NFQALNPTRGIKKIFSLRTAKDCVKALL-YLAAFAIALMIVWRTHRQLLFEQLFANPQDI 170 Query: 180 TAMGNA--MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 A+ M LV C L +V VI D+ + F HL+ L+M +Q++R E K+ EGDP Sbjct: 171 VAIWRQLLMSLVLTCLLCIVCIVI----LDIVAEYFLHLRSLKMDKQEVRREMKEQEGDP 226 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K R R+ + AD+ + +I+ NPTH +V + ++ + P + A Sbjct: 227 EIKHRRREAHMEILSEQTQADIKGSQLIIANPTHLAVGIYHNPDLTPLPFISVLERNQRA 286 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 L +R+ + V +E LAR +Y + + V +L+W+ Sbjct: 287 LAVRDYAKKVGVSVIEDVQLARRIYYTHHLYSFVKINELDQVLRLLSWL 335 >UniRef50_B1TGZ0 Flagellar biosynthetic protein FlhB n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TGZ0_9BURK Length = 216 Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 104/176 (59%), Gaps = 4/176 (2%) Query: 171 MRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIF---SHLKKLRMSRQDIR 227 +R + + +TA G A L L +I F VF K++RMSR +++ Sbjct: 29 VRAASHAGLTAAGLARTLGSASFALATQLLIAAALFTVFDYALVRRRFAKQMRMSRHEVK 88 Query: 228 DEFKQSEGDPHVKGRIRQMQRAAARR-RMMADVPKADVIVNNPTHYSVALQYDENKMSAP 286 EFKQ +GDP +K R RQ+QR +R R + + ADV+V NPTHY++ L+Y +M+AP Sbjct: 89 QEFKQHDGDPRIKQRRRQLQRGLLQRSRSLRGMRGADVLVTNPTHYAIGLRYTPAEMAAP 148 Query: 287 KVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEV 342 +V+KGAG ALR+R++ + V +EAP LAR L+RH + +IP QL+ A A + Sbjct: 149 TIVSKGAGEFALRLRKLAFIHRVQIVEAPALARQLFRHGALDTEIPPQLFVATAAI 204 >UniRef50_Q9F1J7 Putative HrpN (Fragment) n=1 Tax=Acidovorax avenae subsp. avenae RepID=Q9F1J7_9BURK Length = 214 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 81/220 (36%), Positives = 121/220 (55%), Gaps = 13/220 (5%) Query: 144 ELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLG---- 199 E K++LK ++ G+V LWH ++ L+ S + A + ALL + Sbjct: 1 EFAKSVLKAVVFGAV----LWHIVTGLVPLLVAS-VYLTPEASGKIAWSALLKLFSFAFL 55 Query: 200 VIPMVG-FDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMAD 258 V ++G D Q + ++ RMS+ D++ E K SEGDPH+KG ++ ++ A Sbjct: 56 VFLVIGPLDFGLQHWLFIRDQRMSKDDVKRENKDSEGDPHLKGHLKSLREEMATSPPQER 115 Query: 259 VPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLA 318 VP A V+V NPTHY+VAL+Y+ P VVAKG A IR + A +++P + PPLA Sbjct: 116 VPGATVVVTNPTHYAVALRYEAGATPLPIVVAKGMDEQAAVIRGLAALHHIPLIANPPLA 175 Query: 319 RALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 RAL++ + Q IP +L+ AV+ VL WV +L RL GG Sbjct: 176 RALHK-LPLDQPIPEELFEAVSVVLRWVAELD--RLGGGS 212 >UniRef50_A2WHV2 Flagellar biosynthesis pathway component FlhB n=3 Tax=Proteobacteria RepID=A2WHV2_9BURK Length = 392 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 91/358 (25%), Positives = 177/358 (49%), Gaps = 34/358 (9%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGV-SLARRLSGM 59 MS +S KTE TP + + E GQI ++R+ ++L GV V+ + + + M Sbjct: 1 MSAQS--KTEEATPKKRRDSAERGQILKARDAVVACVMLCGVFVVSKMSLHEIGAVMIDM 58 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALIS----PVMLGGLVF 115 + G D S ++ ++A L +++ V+LV +++ +M V Sbjct: 59 MQNGFDVDTSS-------------YVKSLLVACLKVVAPVLLVCILAAAVPSLMQSKFVL 105 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 + K+L+ F LNP+ G K++F+ +T + +K++L ++V SV +W + +L+A Sbjct: 106 ATKALKINFEALNPVRGFKKIFNLRTVKDFVKSLL-YLVVFSVAVSIVWVRNKE--KLLA 162 Query: 176 ESPITAMGNAMDLVGLCALLVVLGVIPMVG-------FDVFFQIFSHLKKLRMSRQDIRD 228 + G +VGL L+V V+ +G DV ++ H K+LRM++++++ Sbjct: 163 QFYSDLHG----VVGLWKDLMVDLVLTCLGCALVILILDVLVEMLIHRKELRMAKEEVKR 218 Query: 229 EFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKV 288 E K++EG P +KGR ++M + + D+ + +I+ NPTH +V + ++ + + P V Sbjct: 219 ERKENEGSPEIKGRRKEMHQELLSEQDKHDIQNSKMIIANPTHVAVGIYFNPSHLPYPLV 278 Query: 289 VAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 AL +R + VP + PLAR +Y+ + + + + V ++ W+ Sbjct: 279 SISERNQRALAVRRYAEKIGVPVIVDVPLARQIYKSHKRYEIVSLDVLEPVVRLMVWL 336 >UniRef50_B3RAC6 SctU: non flagellar T3S system conserved inner membrane protein. flhB/hrpN/yscU/spaS family n=1 Tax=Cupriavidus taiwanensis RepID=B3RAC6_CUPTR Length = 344 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 96/347 (27%), Positives = 178/347 (51%), Gaps = 9/347 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD S+ EA T +L++AR+ G++PRS ++TS ++ L ++ +W G R + Sbjct: 1 MSD-SEKNLEA-TRRKLDEARKRGEVPRSSDVTSAVVFLGVLAGLWLLGRYFVRLFQSLW 58 Query: 61 SAGL-HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + + + + L+LG+ R ++ +LP++ ++ ++ + G + + + Sbjct: 59 HSAMGSVPQHLADQQMLVLGEAA--ARFLLMGVLPIVGLALVCGIVGAFLQVGPLVAFEQ 116 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++P ++LNP G+KRMF+ + L K ++K +L+ + +R P Sbjct: 117 IKPDLARLNPAEGLKRMFAVRNLVNLAKILVKILLLAGLVYVLALGAIEDGVRTGYARPA 176 Query: 180 TAMG-NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + A ++ +C V+ ++ M D + +K+ RMS + R E+K+++GDP Sbjct: 177 EILLLVAYIILRMCCWAAVIYLV-MAVVDYVHERHQFMKRQRMSVDEYRREYKETQGDPI 235 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 + GR R AA + V + +V + T Y+VAL+YD + P+VVAKG+G VA Sbjct: 236 MAGRRRAAFFEAAFFGVSERVRVSTAVVYS-TQYAVALRYD-GPGTLPRVVAKGSGQVAA 293 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAW 345 RIR+ A+ VP+ LA+ LY + + + I L+ VAE++ W Sbjct: 294 RIRQAAADYLVPSAFDSDLAQRLYLNVPLDRFIDRTLFERVAELMRW 340 >UniRef50_P55723 Probable translocation protein y4yO n=6 Tax=Rhizobiales RepID=Y4YO_RHISN Length = 345 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 96/357 (26%), Positives = 159/357 (44%), Gaps = 46/357 (12%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD S++K+ TP +L AR+ GQIPRS + G+ +W G + + Sbjct: 1 MSDTSEEKSHGATPKKLSDARKRGQIPRSSDFVRAAATCAGLGYLWLRGSVIEDKCR--- 57 Query: 61 SAGLHFDHSIINDP-NLILGQIILLIREAMLALL-PLISG----VVLVALISPVMLGGLV 114 L + N P NL + Q ++L+ E LA + PL+S V+L AL++ G V Sbjct: 58 -EALLLTDKLQNLPFNLAVRQALVLLVELTLATVGPLLSALFGAVILAALLANR---GFV 113 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 FS + ++P F K+NP +KR+ SA++ E+ K + K +++G F W M+ L Sbjct: 114 FSLEPMKPNFDKINPFQWLKRLGSARSAVEVGKTLFKVLVLGGTFSLFFLGLWKTMVYL- 172 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDV-----------FFQIFSHLKKLRMSR 223 P+ MG C +V G ++G Q L+++RM++ Sbjct: 173 ---PVCGMG--------CFGVVFTGAKQLIGIGAGALLIGGLIDLLLQRALFLREMRMTK 221 Query: 224 QDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADV----IVNNPTHYSVALQYD 279 +I+ E K+ +G P +KG R++ R MA P V +V T + L+Y Sbjct: 222 TEIKRELKEQQGTPELKGERRRI------RNEMASEPPLGVHRATLVYRGTAVLIGLRYV 275 Query: 280 ENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLY 336 + P +V + G A + + ++ LA L ++G IP Q + Sbjct: 276 RGETGVPILVCRAEGEAASDMFREAQNLRLKIVDDHVLAHQLMSTTKLGTAIPMQYF 332 >UniRef50_D2TZ36 Type III secretion system protein SpaS n=1 Tax=Arsenophonus nasoniae RepID=D2TZ36_9ENTR Length = 345 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 81/346 (23%), Positives = 169/346 (48%), Gaps = 15/346 (4%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PTP +L+ A ++G+ +S++L ++ +G ++ + + + L Sbjct: 2 SANKTEKPTPKKLKDAAQKGKSFKSKDLVISCLIFLGC--LYLTNYINFTTIIEIWANTL 59 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 +HSI P L +L A+ LP + +L+ +++ + G + K L+ F Sbjct: 60 KNNHSI--TP---LNYTFVLFFTALKIFLPFLFLCILIIMLTTMAQTGFKIATKVLKFDF 114 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMM----RLMAESPIT 180 + LNP+ G+K++FS +T + +K L I+ VT + W++ +++ L ES Sbjct: 115 NNLNPINGVKKIFSIRTIKDFIKTFLFIIIFFIVT-YIYWNNNKKIIFSQIYLNIESVFI 173 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 +LV ++++L ++ D + F H+K L+M + +++ E+K+ EG+P +K Sbjct: 174 VWK---ELVSNFIIILLLSSFIILILDAVAEYFIHIKDLKMDKNEVKREYKEQEGNPEIK 230 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 + +++ ++ +D+ + ++ NPTH + + + ++ P V AL Sbjct: 231 SKRKELHVEILSEQVKSDIESSKFMIANPTHIIIGIYLNPQIVAIPMVSVLETNQRALAA 290 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 R + VP +E LAR +Y ++ I + V ++L+W+ Sbjct: 291 RAYAEKEGVPVIENIVLARRIYNTHQLYSFINLEEIGEVIKILSWL 336 >UniRef50_P40702 Surface presentation of antigens protein spaS n=62 Tax=Enterobacteriaceae RepID=SPAS_SALTY Length = 356 Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 85/371 (22%), Positives = 172/371 (46%), Gaps = 35/371 (9%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVS-VIWFGGVSLARRLSGMLSAG 63 S +KTE PT RLE + ++GQ +S++L + L G++ ++ +G + + ++ A Sbjct: 2 SSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIAD 61 Query: 64 LHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 +FD S+ + + G + L+P + ++ + + ++ G V + ++L+P Sbjct: 62 -NFDQSMADYSLAVFGI-------GLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPN 113 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGS---VTGFFLWHHWPQMMRLMAESPIT 180 S LNP+ G K++FS +T +K +KT+L S V W + + I Sbjct: 114 LSALNPVEGAKKLFSMRT----VKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIV 169 Query: 181 AMG--------NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQ 232 + + CAL+V+L D + F +K ++M +++++ E K+ Sbjct: 170 GIAVIWRELLLALVLTCLACALIVLL-------LDAIAEYFLTMKDMKMDKEEVKREMKE 222 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 EG+P VK + R++ ++ +D+ + +IV NPTH ++ + + M P + Sbjct: 223 QEGNPEVKSKRREVHMEILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYE 282 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 AL +R + VP + LAR+L++ + + V +L W+ +++ Sbjct: 283 TNQRALAVRAYAEKVGVPVIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVEN- 341 Query: 353 RLAGGQRPVQP 363 G+ +QP Sbjct: 342 ---AGKDVIQP 349 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q56886 Flagellar biosynthetic protein flhB n=153 Tax=ce... 472 e-132 UniRef50_B2T7B1 Flagellar biosynthetic protein FlhB n=18 Tax=Bur... 468 e-130 UniRef50_Q46PH4 Flagellar biosynthetic protein FlhB n=1 Tax=Rals... 456 e-127 UniRef50_B8GQZ9 Flagellar biosynthetic protein FlhB n=8 Tax=Gamm... 455 e-126 UniRef50_Q2SBX1 Flagellar biosynthesis pathway, component FlhB n... 443 e-123 UniRef50_Q31HN4 Flagellar biosynthetic protein FlhB n=1 Tax=Thio... 441 e-122 UniRef50_Q3JY73 Flagellar biosynthetic protein FlhB n=61 Tax=cel... 440 e-122 UniRef50_A6SZT0 FlhB flagellar biosynthetic protein n=14 Tax=Bet... 440 e-122 UniRef50_Q085L7 Flagellar biosynthetic protein FlhB n=70 Tax=Gam... 439 e-121 UniRef50_C1D4I4 FlhB1 n=1 Tax=Laribacter hongkongensis HLHK9 Rep... 438 e-121 UniRef50_B9Z6P8 Flagellar biosynthetic protein FlhB n=1 Tax=Luti... 436 e-121 UniRef50_A6W0V5 Flagellar biosynthetic protein FlhB n=2 Tax=Mari... 431 e-119 UniRef50_Q2Y9F9 Flagellar biosynthetic protein FlhB n=2 Tax=Beta... 427 e-118 UniRef50_A1WUA6 Flagellar biosynthetic protein FlhB n=3 Tax=Gamm... 426 e-118 UniRef50_C3K0I5 Putative flagellar biosynthesis-related protein ... 426 e-118 UniRef50_B8FK32 Flagellar biosynthetic protein FlhB n=4 Tax=Bact... 426 e-118 UniRef50_A3DCP3 Flagellar biosynthetic protein FlhB n=14 Tax=Clo... 425 e-117 UniRef50_Q3J977 Flagellar biosynthetic protein FlhB n=3 Tax=Gamm... 425 e-117 UniRef50_Q47I36 Flagellar biosynthetic protein FlhB n=1 Tax=Dech... 423 e-117 UniRef50_B8EA03 Flagellar biosynthetic protein FlhB n=22 Tax=Gam... 421 e-116 UniRef50_A6GUU4 Flagellar biosynthetic protein FlhB n=1 Tax=Limn... 419 e-116 UniRef50_Q2NX25 Flagellar biosynthetic protein FlhB n=7 Tax=Ente... 418 e-115 UniRef50_B9ZRA6 Flagellar biosynthetic protein FlhB n=1 Tax=Thio... 418 e-115 UniRef50_B1HQX6 Flagellar biosynthetic protein n=17 Tax=Bacillac... 418 e-115 UniRef50_B2UHW8 Flagellar biosynthetic protein FlhB n=6 Tax=Rals... 416 e-115 UniRef50_P35538 Flagellar biosynthetic protein flhB n=10 Tax=Bac... 415 e-114 UniRef50_D0I461 Flagellar biosynthesis protein FlhB n=2 Tax=Vibr... 415 e-114 UniRef50_B8CYQ0 Flagellar biosynthetic protein FlhB n=1 Tax=Halo... 415 e-114 UniRef50_B4RUM4 Flagellar biosynthesis protein n=3 Tax=Alteromon... 414 e-114 UniRef50_Q2LT07 Flagellar biosynthesis pathway component n=1 Tax... 414 e-114 UniRef50_D0KYP0 Flagellar biosynthetic protein FlhB n=1 Tax=Halo... 414 e-114 UniRef50_C6NWP2 Flagellar biosynthesis protein FlhB n=2 Tax=Prot... 412 e-114 UniRef50_Q1NP88 Flagellar biosynthetic protein FlhB n=2 Tax=Delt... 412 e-114 UniRef50_C0ZF82 Flagellar biosynthetic protein FlhB n=4 Tax=Paen... 411 e-113 UniRef50_A5I580 Flagellar biosynthetic protein n=19 Tax=Bacteria... 411 e-113 UniRef50_Q0AYL8 Flagellar biosynthesis/type III secretory pathwa... 410 e-113 UniRef50_Q3V867 Flagellar biosynthetic protein FlhB n=5 Tax=Legi... 408 e-112 UniRef50_P57334 Flagellar biosynthetic protein flhB n=4 Tax=Buch... 408 e-112 UniRef50_A0L3J7 Flagellar biosynthetic protein FlhB n=1 Tax=Magn... 407 e-112 UniRef50_A6F9S1 Flagellar biosynthetic protein n=1 Tax=Moritella... 407 e-112 UniRef50_A1HN21 Flagellar biosynthetic protein FlhB n=2 Tax=Veil... 406 e-112 UniRef50_UPI0001BCCDC9 flagellar biosynthesis/type III secretory... 406 e-112 UniRef50_A0Z390 Flagellar biosynthetic protein FlhB n=3 Tax=uncl... 406 e-112 UniRef50_B2A365 Flagellar biosynthetic protein FlhB n=3 Tax=Bact... 405 e-111 UniRef50_C5S862 Flagellar biosynthetic protein FlhB n=1 Tax=Allo... 404 e-111 UniRef50_C9PBY4 Flagellar biosynthesis protein FlhB n=4 Tax=Vibr... 404 e-111 UniRef50_C9LSQ5 Flagellar biosynthetic protein FlhB n=1 Tax=Sele... 403 e-111 UniRef50_A4J750 Flagellar biosynthetic protein FlhB n=1 Tax=Desu... 402 e-111 UniRef50_B1LC25 Flagellar biosynthetic protein FlhB n=6 Tax=Ther... 402 e-110 UniRef50_C4G684 Putative uncharacterized protein n=1 Tax=Abiotro... 401 e-110 UniRef50_C1SNG6 Flagellar biosynthetic protein FlhB n=1 Tax=Deni... 401 e-110 UniRef50_Q3V7G4 Flagellar biosynthetic protein flhB n=2 Tax=Prot... 401 e-110 UniRef50_Q3ADC9 Flagellar biosynthetic protein FlhB n=2 Tax=Bact... 401 e-110 UniRef50_Q2W9Q2 Flagellar biosynthesis pathway n=3 Tax=Magnetosp... 399 e-110 UniRef50_A7K1M6 Flagellar biosynthesis protein FlhB n=13 Tax=Vib... 398 e-109 UniRef50_A1VY54 Flagellar biosynthetic protein FlhB n=27 Tax=Eps... 397 e-109 UniRef50_C4ZAM8 Flagellar biosynthesis/type III secretory pathwa... 397 e-109 UniRef50_Q0ANB5 Flagellar biosynthetic protein FlhB n=3 Tax=Hyph... 396 e-108 UniRef50_A5D0H9 Flagellar biosynthesis pathway, component FlhB n... 395 e-108 UniRef50_B0TNN8 Flagellar biosynthetic protein FlhB n=7 Tax=Shew... 394 e-108 UniRef50_A2SKE1 Flagellar biosynthesis protein n=2 Tax=Burkholde... 394 e-108 UniRef50_D1B6A6 Flagellar biosynthetic protein FlhB n=1 Tax=Ther... 394 e-108 UniRef50_B8CVM2 Flagellar biosynthetic protein FlhB n=1 Tax=Shew... 393 e-108 UniRef50_C9XJ38 Flagellar export protein n=7 Tax=Bacteria RepID=... 393 e-108 UniRef50_UPI0001C3562E flagellar biosynthesis protein FlhB n=1 T... 393 e-108 UniRef50_B9L5B0 Flagellar biosynthetic protein FlhB n=2 Tax=Ther... 393 e-108 UniRef50_B2SN53 Flagellar biosynthetic protein FlhB n=14 Tax=Xan... 393 e-108 UniRef50_Q1YV76 Flagellar biosynthetic protein FlhB n=1 Tax=gamm... 392 e-107 UniRef50_Q97H65 FliR/FlhB fusion protein n=1 Tax=Clostridium ace... 391 e-107 UniRef50_C5EFG7 Flagellar export protein n=3 Tax=Clostridiales R... 391 e-107 UniRef50_A8F4V6 Flagellar biosynthetic protein FlhB n=1 Tax=Ther... 390 e-107 UniRef50_C6MMA1 Flagellar biosynthetic protein FlhB n=1 Tax=Geob... 390 e-107 UniRef50_Q1I766 Flagellar biosynthetic protein FlhB n=22 Tax=Gam... 389 e-107 UniRef50_A8TPM3 Flagellar biosynthesis protein B n=1 Tax=alpha p... 389 e-107 UniRef50_Q3A5E5 Flagellar biosynthetic protein FlhB n=3 Tax=Delt... 389 e-107 UniRef50_C0C1N4 Putative uncharacterized protein n=1 Tax=Clostri... 389 e-106 UniRef50_A6D5X3 Flagellar biosynthetic protein n=4 Tax=Gammaprot... 389 e-106 UniRef50_A8MHF6 Flagellar biosynthetic protein FlhB n=2 Tax=Alka... 386 e-106 UniRef50_B0MPC8 Putative uncharacterized protein n=1 Tax=Eubacte... 386 e-106 UniRef50_A7FED7 Flagellar biosynthetic protein FlhB n=25 Tax=Ent... 385 e-105 UniRef50_C1DW37 Flagellar biosynthetic protein FlhB n=3 Tax=Sulf... 385 e-105 UniRef50_C5SN70 Flagellar biosynthetic protein FlhB n=1 Tax=Asti... 384 e-105 UniRef50_A6M184 Flagellar biosynthetic protein FlhB n=4 Tax=Bact... 384 e-105 UniRef50_C1ZJL2 Flagellar biosynthetic protein FlhB n=1 Tax=Plan... 384 e-105 UniRef50_B4U884 Flagellar biosynthetic protein FlhB n=3 Tax=Bact... 383 e-105 UniRef50_C5RFV5 Flagellar biosynthetic protein FlhB n=1 Tax=Clos... 383 e-105 UniRef50_B8FTQ2 Flagellar biosynthetic protein FlhB n=2 Tax=Desu... 382 e-105 UniRef50_B0THC3 Flagellar biosynthetic protein flhb, putative n=... 382 e-104 UniRef50_Q8D3G7 FlhB protein n=1 Tax=Wigglesworthia glossinidia ... 382 e-104 UniRef50_B6IS89 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 381 e-104 UniRef50_A7HWA1 Flagellar biosynthetic protein FlhB n=9 Tax=Alph... 381 e-104 UniRef50_D0IYF3 Type III secretion exporter n=11 Tax=Comamonadac... 380 e-104 UniRef50_A9BHY6 Flagellar biosynthetic protein FlhB n=1 Tax=Petr... 380 e-104 UniRef50_Q67K27 Flagellar biosynthesis protein n=1 Tax=Symbiobac... 379 e-104 UniRef50_Q6MI50 Flagella-associated protein n=1 Tax=Bdellovibrio... 379 e-103 UniRef50_Q316G6 Flagellar biosynthetic protein FlhB n=7 Tax=Desu... 378 e-103 UniRef50_B5YIY9 Flagellar biosynthetic protein FlhB n=1 Tax=Ther... 378 e-103 UniRef50_D0XSL6 Flagellar biosynthetic protein FlhB n=1 Tax=Brev... 377 e-103 UniRef50_Q1D9K3 FlhB/HrpN/YscU/SpaS family protein n=3 Tax=Cysto... 377 e-103 UniRef50_A4XIZ4 Flagellar biosynthetic protein FlhB n=2 Tax=Clos... 377 e-103 UniRef50_A4YXU5 Flagellar biosynthetic protein FlhB n=12 Tax=Bra... 376 e-103 UniRef50_C0QA53 FlhB2 n=1 Tax=Desulfobacterium autotrophicum HRM... 376 e-103 UniRef50_C8W1H2 Flagellar biosynthetic protein FlhB n=1 Tax=Desu... 375 e-102 UniRef50_A7HLM7 Flagellar biosynthetic protein FlhB n=3 Tax=Ther... 374 e-102 UniRef50_Q0EZ55 Flagellar biosynthesis protein n=1 Tax=Mariprofu... 374 e-102 UniRef50_Q2P9D1 HrcU protein n=12 Tax=Xanthomonas RepID=Q2P9D1_X... 374 e-102 UniRef50_UPI00016C3B58 flagellar biosynthesis protein FlhB n=1 T... 372 e-101 UniRef50_A1T0L4 Flagellar biosynthetic protein FlhB n=1 Tax=Psyc... 372 e-101 UniRef50_Q5DY36 Lateral flagellar export/assembly protein (FlhB-... 370 e-101 UniRef50_B8J3L1 Flagellar biosynthetic protein FlhB n=5 Tax=Desu... 369 e-101 UniRef50_B1I5J8 Flagellar biosynthetic protein FlhB n=1 Tax=Cand... 369 e-101 UniRef50_B1K3A0 Type III secretion exporter n=13 Tax=Betaproteob... 369 e-100 UniRef50_Q7UXG2 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 368 e-100 UniRef50_C8WWG5 Flagellar biosynthetic protein FlhB n=2 Tax=Alic... 367 e-100 UniRef50_C2ED97 Flagellar biosynthesis protein FlhB n=5 Tax=Lact... 367 e-100 UniRef50_A8U5W0 Flagellar biosynthesis protein B n=1 Tax=Carnoba... 366 e-100 UniRef50_A9KNE0 Flagellar biosynthetic protein FlhB n=1 Tax=Clos... 366 e-100 UniRef50_Q1NGK4 Flagellar biosynthetic protein n=1 Tax=Sphingomo... 365 1e-99 UniRef50_A6Q2P0 Flagellar biosynthetic protein FlhB n=2 Tax=Bact... 365 2e-99 UniRef50_Q2RKD2 Flagellar biosynthetic protein FlhB n=5 Tax=Bact... 364 4e-99 UniRef50_A4SI11 Lateral flagellar biosynthetic protein, LfhB n=2... 364 4e-99 UniRef50_C4Z5H8 Flagellar biosynthetic protein FlhB n=5 Tax=Bact... 364 4e-99 UniRef50_B3EAW0 Flagellar biosynthetic protein FlhB n=8 Tax=Desu... 362 8e-99 UniRef50_UPI0001C312BE flagellar biosynthetic protein FlhB n=1 T... 362 1e-98 UniRef50_B9Z4S0 Type III secretion exporter n=1 Tax=Lutiella nit... 362 1e-98 UniRef50_B6QWX7 Translocation protein in type III secretion n=2 ... 362 1e-98 UniRef50_Q2SH55 Type III secretory pathway, component EscU n=1 T... 361 2e-98 UniRef50_Q1Q6S5 Similar to flagellar biosynthetic protein FlhB n... 361 2e-98 UniRef50_Q5FQT1 Flagellar biosynthetic protein FlhB n=1 Tax=Gluc... 360 6e-98 UniRef50_C6WJP3 Type III secretion exporter n=1 Tax=Actinosynnem... 359 8e-98 UniRef50_B6AMB2 Flagellar biosynthesis protein, FlhB n=1 Tax=Lep... 359 8e-98 UniRef50_B6IQA2 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 359 9e-98 UniRef50_B2TLW3 Flagellar biosynthetic protein FliR/FlhB n=6 Tax... 359 1e-97 UniRef50_C2KYZ7 Flagellar biosynthesis protein FlhB n=1 Tax=Orib... 358 2e-97 UniRef50_C8WBS8 Type III secretion exporter n=3 Tax=Zymomonas mo... 357 5e-97 UniRef50_B3PPK9 Flagellar biosynthesis transmembrane protein n=1... 356 6e-97 UniRef50_C4XT81 Flagellar biosynthetic protein FlhB n=1 Tax=Desu... 356 1e-96 UniRef50_B8H3H7 Flagellar biosynthesis protein FlhB n=6 Tax=Caul... 356 1e-96 UniRef50_C2KTQ0 Flagellar biosynthesis protein FlhB n=3 Tax=Mobi... 354 3e-96 UniRef50_Q0FML8 Flagellar biosynthesis protein B n=4 Tax=Rhodoba... 354 3e-96 UniRef50_A8EW41 Flagellar biosynthetic protein FlhB n=1 Tax=Arco... 354 3e-96 UniRef50_UPI0001744A09 Type III secretory pathway, component Esc... 354 3e-96 UniRef50_A4Y0Q6 Flagellar biosynthetic protein FlhB n=1 Tax=Pseu... 354 4e-96 UniRef50_A8IPK5 Flagellar biosynthetic protein n=14 Tax=Alphapro... 353 7e-96 UniRef50_A5V2R9 Type III secretion exporter n=2 Tax=Sphingomonad... 352 1e-95 UniRef50_Q89AN6 Flagellar biosynthetic protein flhB n=1 Tax=Buch... 350 3e-95 UniRef50_C6HWM0 Flagellar biosynthetic protein FlhB n=1 Tax=Lept... 350 3e-95 UniRef50_C9NX90 Type III secretion inner membrane protein HrpY n... 350 4e-95 UniRef50_A1TJC2 Type III secretion protein, YscU/HrpY family n=5... 350 6e-95 UniRef50_Q0G102 Flagellar biosynthesis protein B n=3 Tax=Rhizobi... 349 8e-95 UniRef50_O54243 Flagellar biosynthetic protein flhB n=46 Tax=Rhi... 349 1e-94 UniRef50_D2S977 Type III secretion exporter n=1 Tax=Geodermatoph... 349 1e-94 UniRef50_P69986 Yop proteins translocation protein U n=49 Tax=Ga... 349 2e-94 UniRef50_C8WYW8 Flagellar biosynthetic protein FlhB n=1 Tax=Desu... 347 3e-94 UniRef50_A1SEN0 Type III secretion exporter n=1 Tax=Nocardioides... 347 4e-94 UniRef50_A6W8L6 Type III secretion exporter n=1 Tax=Kineococcus ... 346 6e-94 UniRef50_A0P0L7 Translocation protein in type III secretion n=1 ... 346 1e-93 UniRef50_A1UTV9 Flagellar biosynthetic protein FlhB n=1 Tax=Bart... 344 4e-93 UniRef50_D2R543 Type III secretion exporter n=3 Tax=Bacteria Rep... 344 4e-93 UniRef50_O67813 Flagellar biosynthetic protein flhB n=1 Tax=Aqui... 344 4e-93 UniRef50_D2NZE2 Flagellar biosynthesis protein FlhB n=21 Tax=Lis... 342 9e-93 UniRef50_A0RCA2 Flagellar biosynthetic protein n=72 Tax=Bacillus... 342 1e-92 UniRef50_D0DA90 Flagellar biosynthetic protein FlhB n=1 Tax=Citr... 342 1e-92 UniRef50_A3D418 Type III secretion protein, YscU/HrpY family n=1... 342 1e-92 UniRef50_Q2RQH7 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 341 2e-92 UniRef50_C0GJG3 Type III secretion exporter n=1 Tax=Dethiobacter... 341 2e-92 UniRef50_P96069 Secretion system apparatus protein ssaU n=35 Tax... 340 4e-92 UniRef50_Q2SC29 Type III secretory pathway, component EscU n=1 T... 340 5e-92 UniRef50_A4TRY5 Type III secretion apparatus protein n=30 Tax=En... 340 5e-92 UniRef50_Q9ZL73 Flagellar biosynthetic protein flhB n=16 Tax=Hel... 340 5e-92 UniRef50_B7QTP8 Type III secretion exporter n=1 Tax=Ruegeria sp.... 340 6e-92 UniRef50_C1A547 Flagellar biosynthesis protein FlhB n=1 Tax=Gemm... 339 1e-91 UniRef50_C6NYG2 Flagellar biosynthesis protein FlhB n=1 Tax=Acid... 339 1e-91 UniRef50_Q4JMS7 Predicted flagellar biosynthetic protein n=1 Tax... 339 1e-91 UniRef50_A3SFT1 Flagella-associated protein n=2 Tax=Sulfitobacte... 339 1e-91 UniRef50_UPI00019F17CC secretion system apparatus protein SsaU n... 338 2e-91 UniRef50_D2TZS1 Type III secretion inner membrane protein YscU,S... 337 4e-91 UniRef50_B1LWT8 Flagellar biosynthetic protein FlhB n=8 Tax=Meth... 337 6e-91 UniRef50_Q1GCC9 Flagellar biosynthetic protein flhB n=3 Tax=Rhod... 335 2e-90 UniRef50_D0MGA4 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 335 2e-90 UniRef50_C7R0I2 Type III secretion exporter n=1 Tax=Jonesia deni... 335 2e-90 UniRef50_B1ZR29 Type III secretion exporter n=1 Tax=Opitutus ter... 334 3e-90 UniRef50_A3V235 Flagellar protein FlhB n=2 Tax=Rhodobacterales R... 334 3e-90 UniRef50_B2IK02 Flagellar biosynthetic protein FlhB n=1 Tax=Beij... 334 5e-90 UniRef50_Q1MQX2 Translocation protein in type III secretion n=6 ... 333 7e-90 UniRef50_Q84CR0 Putative type III secretion protein n=3 Tax=Bord... 333 8e-90 UniRef50_D1BCL3 Flagellar biosynthesis pathway, component FlhB n... 332 1e-89 UniRef50_Q2RZE8 Flagellar biosynthetic protein flhB n=1 Tax=Sali... 330 5e-89 UniRef50_B1Z5N7 Type III secretion exporter n=4 Tax=Burkholderia... 330 6e-89 UniRef50_C1F996 Flagellar biosynthetic protein FlhB n=1 Tax=Acid... 329 1e-88 UniRef50_B5JK52 FlhB/HrpN/YscU/SpaS family n=1 Tax=Verrucomicrob... 329 1e-88 UniRef50_A8LMR4 Flagellar biosynthesis protein FlhB n=3 Tax=Rhod... 329 1e-88 UniRef50_B9KJE4 Flagellar biosynthetic protein FlhB n=7 Tax=Rhod... 328 2e-88 UniRef50_A9HH78 Putative flagellar biosynthetic protein flhB n=1... 327 3e-88 UniRef50_C6QF02 Type III secretion exporter n=1 Tax=Hyphomicrobi... 327 5e-88 UniRef50_A5P6J3 Type III secretion exporter n=2 Tax=Erythrobacte... 327 6e-88 UniRef50_C4PLU4 Type III secretion system inner membrane protein... 325 1e-87 UniRef50_A0LT73 Type III secretion exporter n=1 Tax=Acidothermus... 321 2e-86 UniRef50_Q01PP8 Type III secretion exporter n=1 Tax=Candidatus S... 320 6e-86 UniRef50_C6N718 Putative flagellar biosynthetic protein FlhB n=1... 320 6e-86 UniRef50_O85640 Secretion system apparatus protein SsaU n=26 Tax... 319 1e-85 UniRef50_Q04SD5 Endoflagellar biosynthesis protein n=4 Tax=Lepto... 319 1e-85 UniRef50_Q28JK7 Flagellar biosynthetic protein FlhB n=1 Tax=Jann... 318 2e-85 UniRef50_C5CXN4 Type III secretion exporter n=1 Tax=Variovorax p... 318 3e-85 UniRef50_B0SDH0 Endoflagellar biosynthesis protein n=2 Tax=Lepto... 317 3e-85 UniRef50_Q12T86 Type III secretion exporter n=1 Tax=Shewanella d... 316 7e-85 UniRef50_A3NKX0 Type III secretion protein, YscU/HrpY family n=2... 316 8e-85 UniRef50_C3XFW9 Flagellar biosynthesis protein FlhB n=3 Tax=Heli... 315 2e-84 UniRef50_A6GN26 Type III secretion component protein SctU n=1 Ta... 314 3e-84 UniRef50_A1B5B9 Type III secretion exporter n=3 Tax=Rhodobactera... 314 4e-84 UniRef50_O83710 Flagellar biosynthetic protein flhB n=4 Tax=Trep... 313 8e-84 UniRef50_P35652 Hypersensitivity response secretion protein hrcU... 312 1e-83 UniRef50_Q1IR59 Type III secretion exporter n=1 Tax=Candidatus K... 312 1e-83 UniRef50_C6XFL0 Flagellar biosynthesis protein FlhB n=1 Tax=Cand... 312 2e-83 UniRef50_C0AA48 Type III secretion exporter n=1 Tax=Opitutaceae ... 311 3e-83 UniRef50_B1K591 Type III secretion exporter n=1 Tax=Burkholderia... 310 4e-83 UniRef50_D0ZDM3 Type III secretion apparatus protein n=5 Tax=Edw... 310 5e-83 UniRef50_Q1NCU7 YscU; putative type III secretion protein n=1 Ta... 309 1e-82 UniRef50_A4WVT4 Type III secretion exporter n=4 Tax=Rhodobactera... 308 3e-82 UniRef50_Q2SEX3 Flagellar biosynthesis pathway, component FlhB n... 308 3e-82 UniRef50_Q0C5I7 FlhB/HrpN/YscU/SpaS family protein n=1 Tax=Hypho... 307 3e-82 UniRef50_Q44760 Flagellar biosynthetic protein flhB n=23 Tax=Bor... 307 6e-82 UniRef50_A6CGV2 Flagellar biosynthetic protein FlhB (Fragment) n... 307 7e-82 UniRef50_B5Y7F6 Flagellar biosynthetic protein FlhB n=1 Tax=Copr... 306 1e-81 UniRef50_Q1D0P0 Type III secretion protein, FlhB/HrpN/YscU/SpaS ... 304 3e-81 UniRef50_Q6MD75 Putative type III secretion pathway protein sctU... 303 8e-81 UniRef50_A3P7C2 Type III secretion protein, YscU/HrpY family n=3... 301 3e-80 UniRef50_C6CGR8 Type III secretion protein, YscU/HrpY family n=2... 301 4e-80 UniRef50_Q16DQ8 Flagellar biosynthetic protein FlhB n=15 Tax=Rho... 300 8e-80 UniRef50_C0QXX4 Flagellar biosynthesis protein FlhB n=2 Tax=Brac... 298 2e-79 UniRef50_C8BNV0 HrcU n=6 Tax=Gammaproteobacteria RepID=C8BNV0_PSESY 297 5e-79 UniRef50_Q93PY9 RscU n=4 Tax=Pseudomonas RepID=Q93PY9_PSEFL 297 7e-79 UniRef50_D2LD13 Type III secretion exporter n=1 Tax=Rhodomicrobi... 296 1e-78 UniRef50_A3VS81 Flagellar biosynthetic protein FlhB n=1 Tax=Parv... 291 3e-77 UniRef50_C9NP54 Type III secretion protein HrpY n=1 Tax=Vibrio c... 287 5e-76 UniRef50_Q2NR69 Type III secretion apparatus n=5 Tax=Enterobacte... 284 3e-75 UniRef50_A2WHV2 Flagellar biosynthesis pathway component FlhB n=... 283 8e-75 UniRef50_D2TZ36 Type III secretion system protein SpaS n=1 Tax=A... 282 1e-74 UniRef50_B8HEI9 Type III secretion exporter n=1 Tax=Arthrobacter... 281 4e-74 UniRef50_B3RAC6 SctU: non flagellar T3S system conserved inner m... 278 2e-73 UniRef50_Q2NVH8 Type III secretion apparatus SpaS n=7 Tax=Entero... 277 4e-73 UniRef50_C4UMD4 Putative uncharacterized protein n=1 Tax=Yersini... 277 6e-73 UniRef50_C2LLU2 Possible flagellar biosynthesis protein FlhB n=4... 276 8e-73 UniRef50_P40702 Surface presentation of antigens protein spaS n=... 271 3e-71 UniRef50_A5G0E6 Type III secretion exporter n=1 Tax=Acidiphilium... 271 3e-71 UniRef50_Q9KKG9 YsaU n=9 Tax=cellular organisms RepID=Q9KKG9_YEREN 271 3e-71 UniRef50_A7H8A9 Type III secretion exporter n=1 Tax=Anaeromyxoba... 270 4e-71 UniRef50_Q3JL20 Secretion apparatus protein bsaZ n=37 Tax=Proteo... 268 2e-70 UniRef50_D2UDN8 Probable xanthomonas secretion apparatus protein... 263 5e-69 UniRef50_C3KN95 Translocation protein in type III secretion syst... 263 1e-68 Sequences not found previously or not previously below threshold: >UniRef50_Q56886 Flagellar biosynthetic protein flhB n=153 Tax=cellular organisms RepID=FLHB_YEREN Length = 383 Score = 472 bits (1216), Expect = e-132, Method: Composition-based stats. Identities = 246/383 (64%), Positives = 316/383 (82%), Gaps = 1/383 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD DK+E PT H+LEKARE+GQIPRSRELTS+L+L G++++W G S+AR+L+ M Sbjct: 1 MAEDSDADKSEEPTAHKLEKAREKGQIPRSRELTSMLMLGAGLAILWVSGESMARQLAAM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 ++ GLHFDH +I+D +L QI +L+R+ ++ L+P+ +G+V+VA+ P++LGG++FSG+S Sbjct: 61 IAQGLHFDHGLISDDKQMLRQIGMLLRQTLIGLIPIFAGLVIVAMAVPMLLGGVLFSGES 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++ +++P+ G+KRMFS+Q AELLKAILK LVG VTG FLWH+WP MMRLMA P+ Sbjct: 121 IKFDLKRMSPIAGLKRMFSSQALAELLKAILKATLVGWVTGIFLWHNWPDMMRLMAAPPV 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+G+A+ L+ C L+VVLG+ PMVGFDVFFQI SH+KKLRM++Q+IRDEFK EGDPHV Sbjct: 181 AALGDALHLIIFCGLVVVLGLTPMVGFDVFFQITSHIKKLRMTKQEIRDEFKDQEGDPHV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ QRA ARRRMMADV KADVIV NPTHY+VALQY+E KMSAPKV+AKGAG VALR Sbjct: 241 KGRIRQQQRAMARRRMMADVHKADVIVTNPTHYAVALQYNETKMSAPKVLAKGAGAVALR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+GAE+ +P LEAPPLARAL+RH+E+GQ IP LYAAVAEVLAWV+QLKRW+ GG Sbjct: 301 IRELGAEHRIPLLEAPPLARALFRHSEVGQHIPATLYAAVAEVLAWVYQLKRWKREGGLI 360 Query: 360 PVQPTHLPVPEALDFINEKPTHE 382 P +P HLPVPE LDF E+ + Sbjct: 361 PKKPEHLPVPEGLDFATEESETD 383 >UniRef50_B2T7B1 Flagellar biosynthetic protein FlhB n=18 Tax=Burkholderia RepID=B2T7B1_BURPP Length = 403 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 183/374 (48%), Positives = 256/374 (68%), Gaps = 1/374 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD +KTE+ TP RL+KAREEGQI RSREL++ +L G +W S+ L GM Sbjct: 1 MAEDSDLEKTESATPRRLQKAREEGQIVRSRELSTFALLAAGFFGVWGMSGSIGEHLQGM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L A FDH+ + ++ + RE + ALLP+++ + AL +P+ LGG S K Sbjct: 61 LRAAFSFDHAGAFETRRMMIGAGVASREGLYALLPILAFTGVAALFAPMALGGWQLSAKG 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+PKF +LNP+ G+ +MFS +L ++ KT++VG + G +W+ +++ L + Sbjct: 121 LEPKFDRLNPIAGLGKMFSINGPIQLGMSLAKTLVVGVIGGTAIWNRREEILALAMQPLH 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ N + L+ +C + V G+ + DV +Q++ KKLRM++++++ E ++SEGDPHV Sbjct: 181 LALANTVHLIAVCCGMTVAGMFVVAAMDVPYQLWQFHKKLRMTKEEVKREHRESEGDPHV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ QRA ARRRMM +VPKADV+V NPTH++VALQY + +M APKVVAKG LVA R Sbjct: 241 KGRIRQQQRAIARRRMMTNVPKADVVVTNPTHFAVALQYTDGEMRAPKVVAKGVNLVAAR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IREI AENNVP LEAPPLARALY + E+ ++IPG LY AVAEVLAWV+QL+R++ GG Sbjct: 301 IREIAAENNVPLLEAPPLARALYHNVELNREIPGPLYGAVAEVLAWVYQLRRFKTEGGDV 360 Query: 360 PVQPTHLPVPEALD 373 P+ PT L VP LD Sbjct: 361 PLAPTELDVPAELD 374 >UniRef50_Q46PH4 Flagellar biosynthetic protein FlhB n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PH4_RALEJ Length = 380 Score = 456 bits (1173), Expect = e-127, Method: Composition-based stats. Identities = 185/379 (48%), Positives = 266/379 (70%), Gaps = 1/379 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MSDESD +KTE +P RLEKAREEGQ+ RSREL + ++L+ GV +W G ++ R L + Sbjct: 1 MSDESDLEKTEPASPRRLEKAREEGQVVRSRELATFIMLMTGVIGLWTLGGTIGRSLDTV 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + L F+ + D + +L + +I E++LA +PL+ + A+ +P+++GG FS K+ Sbjct: 61 MRQSLRFEPATAFDTSRMLSRFANVIWESLLAFMPLLLLFGVAAVAAPLLMGGWTFSTKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P F +++P+ G+ RMFS + AEL+KAI K++LVGSV + +WH P + LM Sbjct: 121 LMPNFGRMSPMSGLGRMFSVHSVAELVKAIAKSLLVGSVGAWVVWHRLPDAIALMNAPVQ 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ + +D+V C + VVL ++ + DV +Q + H KKLRMS+++++ EFK+SEGDPH+ Sbjct: 181 EALLHMLDMVLRCCVPVVLSLLLVAAIDVPWQFWEHFKKLRMSKEEVKQEFKESEGDPHI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ QRA ARRRMM +VPKADV+V NPTH++VAL+Y+E +MSAP+V+AKG VA R Sbjct: 241 KGRIRQQQRAMARRRMMQEVPKADVVVTNPTHFAVALRYEEGRMSAPRVIAKGTDEVAAR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+ AE+ +P + APPLARAL+RH ++GQ+IP LY AVAEVLAWV+QLK W + G + Sbjct: 301 IRELAAEHRIPLMSAPPLARALHRHVDLGQEIPAGLYTAVAEVLAWVYQLKHWHYSQGPQ 360 Query: 360 PVQPTHLPVPEALDFINEK 378 P P+ L VP+ L + Sbjct: 361 PSAPSDLLVPDELAVPESR 379 >UniRef50_B8GQZ9 Flagellar biosynthetic protein FlhB n=8 Tax=Gammaproteobacteria RepID=B8GQZ9_THISH Length = 384 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 171/371 (46%), Positives = 237/371 (63%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 D S +K+E PTP RL +ARE+GQ+ RSREL + L+LL G + G + R+ M+ Sbjct: 5 DDSSQEKSEQPTPKRLREAREKGQVARSRELNTTLVLLAGAGAMLVLGGGMLSRIQEMVR 64 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + I D + + +IL I E++L LLPL +++ A+ P+ +GG FSGK++ Sbjct: 65 GSFVLEREAIFDASTMQAMLILRISESLLMLLPLFGILLVAAVAGPIAMGGGGFSGKAMA 124 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK++KLNP+ G+KR+FS Q E K + K L+ ++ G LW ++ L +S Sbjct: 125 PKWNKLNPIAGLKRIFSWQGLMEFGKTLAKFALITAIAGSLLWGLSDSLLGLGYQSLEQG 184 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 +G A +VG LL+ +I + DV FQ+++H K+LRM++Q ++DE+K++EG P VK Sbjct: 185 LGRAAWIVGWTFLLLAASLILVALVDVPFQLWNHQKQLRMTKQQVKDEYKETEGKPEVKS 244 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQ Q ARRRMMA VPKADV+V NPTHY+VAL+YD+N APKVVAKGA LVA IR Sbjct: 245 RIRQTQMEIARRRMMAAVPKADVVVTNPTHYAVALRYDQNGSGAPKVVAKGADLVAAEIR 304 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 E E VP APPLARA++ + Q+IP LY AVA+VLA+V+QLK AG + PV Sbjct: 305 ERAREAGVPLFPAPPLARAIFYSTRLDQEIPAGLYVAVAQVLAYVYQLKAAGRAGARAPV 364 Query: 362 QPTHLPVPEAL 372 P LPVP+ L Sbjct: 365 PPADLPVPDEL 375 >UniRef50_Q2SBX1 Flagellar biosynthesis pathway, component FlhB n=7 Tax=Gammaproteobacteria RepID=Q2SBX1_HAHCH Length = 378 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 155/372 (41%), Positives = 240/372 (64%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 +D S +KTE PTP ++EKAREEGQIPRSREL + +LL G + G ++ + L G+ Sbjct: 4 NDTSQEKTEEPTPRKIEKAREEGQIPRSRELNTTAVLLAGAVGLLVFGTTIGKALEGVFR 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 A + D + + + + + ++L+P + +++ +L+ P+ LGG + S K+ Sbjct: 64 ASFTLTREEVFDAHQPMIHLGMAALDMAISLVPFMLVLLVASLLGPIALGGWMMSAKAAA 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PKFS++NPL G+KRMFS ++ EL K + KT++VG V L + P ++ + +E + + Sbjct: 124 PKFSRINPLEGLKRMFSLKSLMELFKGVAKTLVVGGVALIILNYSIPDLLAMGSEDTMVS 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 M +A L+ L + +I + DV FQI+ + K LRM+ Q+I+DE+K +EG P VK Sbjct: 184 MAHACSLLAWSFLFLASSMILIALVDVPFQIYDNQKNLRMTMQEIKDEYKDTEGKPEVKR 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 R+R++Q +RRRM+ DVPKADV++ NPTHYSVAL+YD KM+AP V+AKGA +A++IR Sbjct: 244 RVREVQYEMSRRRMLQDVPKADVVITNPTHYSVALKYDAKKMAAPIVLAKGADHMAMKIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 EI + + + APPL R++Y H E+G++IP LY AVA+VLA+V+QL+R+R G++P Sbjct: 304 EIANAHKIELVSAPPLTRSIYHHTEVGEEIPSGLYLAVAQVLAYVFQLRRYRGGYGKKPQ 363 Query: 362 QPTHLPVPEALD 373 +P L Sbjct: 364 GTPDFTIPSHLR 375 >UniRef50_Q31HN4 Flagellar biosynthetic protein FlhB n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HN4_THICR Length = 381 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 154/379 (40%), Positives = 248/379 (65%), Gaps = 4/379 (1%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 +++ +K+E P+ +L +ARE+GQ+PRS+ELT+LL+ L ++F G + + + Sbjct: 4 NEDGTEKSEEPSEKKLREAREKGQVPRSKELTTLLMTLGAAVFLYFFGAQMMQDFETLFI 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 GL FD S D + ++ L+ ++ ++P + +VL+A++SP++LGG FS ++L Sbjct: 64 KGLSFDRSHAYDFQMATNLVLGLVVHSIYMMVPFLLLMVLIAVVSPMLLGGWNFSTQALA 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK SKLNP+ GIK+MFS EL KA K LV V GFFLW+ + +++ + E P A Sbjct: 124 PKISKLNPVSGIKKMFSMNALMELFKAFAKFTLVSVVAGFFLWYSYEEIISIGIEPPKQA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + +A L+ + V L +I + DV FQI H+ +L+M++Q++++E KQ EG P VKG Sbjct: 184 LAHAGQLIVEAFIFVSLSLILIAAIDVPFQIHQHVTQLKMTKQEVKEEHKQQEGSPEVKG 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQ+QR +++RMM VP+ADV++ NPTH++VAL+Y ++M+ P V+A G+ +A +IR Sbjct: 244 RIRQLQREMSQKRMMQKVPEADVVITNPTHFAVALKYAPDEMAEPMVLALGSDFMAAQIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 + E+N+P +EAPPLARALY +AE+ + IP +L+ AVA +LA+V+QL+ + V Sbjct: 304 TLAKEHNIPLIEAPPLARALYYNAEVDRPIPYELFRAVAAILAYVYQLRDGKR---TDRV 360 Query: 362 QPTHLPVPEALDFINEKPT 380 +LP+PE + +E P+ Sbjct: 361 DFENLPIPEEMK-TDEVPS 378 >UniRef50_Q3JY73 Flagellar biosynthetic protein FlhB n=61 Tax=cellular organisms RepID=Q3JY73_BURP1 Length = 470 Score = 440 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 178/373 (47%), Positives = 249/373 (66%), Gaps = 1/373 (0%) Query: 2 SDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 +++SD D+TEA TP R EKAREEGQ+ RSREL S +L G W + L ML Sbjct: 71 AEDSDLDRTEAATPKRREKAREEGQVARSRELASFALLSAGFYGAWMLSGPIGEHLRTML 130 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 FD + D N +L L E + AL P+++ + AL +P+ +GG + S K+ Sbjct: 131 HTAFSFDRAAAFDTNRMLSHAGTLSLEGLYALAPVLALTGVAALAAPMAMGGWLVSTKTF 190 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + KF +LNP+ G+ R+FS Q +L +I KT++VG + G +W +++ L + Sbjct: 191 ELKFERLNPITGLGRIFSIQGPIQLGMSIAKTLVVGGIGGIAIWRSKDELLGLATQPLHA 250 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ +A+ LV +C + V G++ + G DV +Q++ + KKLRM++++I+ E +++EGDPHVK Sbjct: 251 ALADALHLVAVCCGMTVAGMLVVAGLDVPYQLWQYNKKLRMTKEEIKREHRENEGDPHVK 310 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GRIRQ QRA ARRRMMA+VP ADV+V NPTH++VAL+Y + +M APKVVAKG LVA RI Sbjct: 311 GRIRQQQRAMARRRMMANVPTADVVVTNPTHFAVALKYTDGEMRAPKVVAKGVNLVAARI 370 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 RE+ AE++VP LEAPPLARALY + E+ ++IPG LY+AVAEVLAWV+QLKR+R G P Sbjct: 371 RELAAEHHVPLLEAPPLARALYHNVELEREIPGTLYSAVAEVLAWVYQLKRFRAEAGIAP 430 Query: 361 VQPTHLPVPEALD 373 P L VP LD Sbjct: 431 ETPVDLDVPAELD 443 >UniRef50_A6SZT0 FlhB flagellar biosynthetic protein n=14 Tax=Betaproteobacteria RepID=A6SZT0_JANMA Length = 402 Score = 440 bits (1132), Expect = e-122, Method: Composition-based stats. Identities = 180/381 (47%), Positives = 250/381 (65%), Gaps = 1/381 (0%) Query: 2 SDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 ++ESD +KTE +P +LE+ARE+G +PRSREL + +LL + W G + L+ ML Sbjct: 14 AEESDLEKTEPASPRKLEQAREQGDVPRSRELATCTLLLGAGAAFWILGGRMVGELNKML 73 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 +AGL FD + D L+L I + ++A P +++VALISP ++GG +FSGK+L Sbjct: 74 AAGLSFDREMAFDMELLLAHAAASIIDLLIAFAPAALILIVVALISPALIGGWLFSGKAL 133 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 QP F ++NP+ G+ M S++ EL KAI KTIL+G + + H + +M L E + Sbjct: 134 QPNFGRMNPIKGLGNMVSSRAAVELGKAIAKTILIGWIAWMVMRHEFDAVMALSVEPLKS 193 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + L+ + + G++ + D +Q++ H KKL MSRQD+R E K+SEG+P +K Sbjct: 194 GTEHLGHLLVFSFIFIAAGLVIVAAIDAPYQMWQHAKKLMMSRQDVRQESKESEGNPEIK 253 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +IRQ QR ARRRMMA+VP ADV+V NPTHY+VAL+Y EN M AP+VVAKGA VA +I Sbjct: 254 AKIRQQQREMARRRMMAEVPTADVVVTNPTHYAVALKYSENGMRAPRVVAKGADEVAAKI 313 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 RE+ ENNV LEAPPLARAL+RHAE+G +IP LY AVAEVLA+V+QL+ + GG RP Sbjct: 314 RELAMENNVVLLEAPPLARALFRHAELGDEIPEALYIAVAEVLAYVFQLRAYSKHGGARP 373 Query: 361 VQPTHLPVPEALDFINEKPTH 381 V+P L VP +D +N Sbjct: 374 VKPGDLEVPPEMDPLNPSAAD 394 >UniRef50_Q085L7 Flagellar biosynthetic protein FlhB n=70 Tax=Gammaproteobacteria RepID=Q085L7_SHEFN Length = 377 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 151/373 (40%), Positives = 233/373 (62%), Gaps = 1/373 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 SD ++TE PT RLE++RE+GQ+ RS+EL + +LL G ++A+ L ++ Sbjct: 4 SDSGQERTEDPTSKRLEQSREKGQVARSKELGTAAVLLAASVGFSMTGPAIAKSLYNIMK 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + I D N + ++ E L+ I+ + V+ + ++LGG+ FS K+ Sbjct: 64 QIFSMERDQIFDTNSMFRVWGVVGSELAGPLISFIALLAFVSFLGNIVLGGMSFSVKAFM 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK SKLNP+ G KRMF Q EL K I K +V F L ++ ++ L ++ Sbjct: 124 PKGSKLNPMNGFKRMFGTQALVELTKGIAKFSVVALSAYFLLKFYFYDILTLSSDHLPGN 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + +A+DL+ +L+ ++ +V DV FQI++H K+L+M++Q+++DE+K +EG P VKG Sbjct: 184 VYHALDLLIWMFILLCSSMLLIVIIDVPFQIWNHKKQLKMTKQEVKDEYKDTEGKPEVKG 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQMQ+ A+RRMM +VP ADVIV NP HY+VA++YD ++ SAP ++AKG VA RIR Sbjct: 244 RIRQMQQEMAQRRMMTEVPNADVIVVNPEHYAVAVKYDVSRSSAPFLIAKGVDDVAFRIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 EI E+NV + APPLARA+Y ++ QQ+P L+ AVA+VLA+V+QL++++ G+RP Sbjct: 304 EIAREHNVAIVSAPPLARAIYHTTKVDQQVPEGLFTAVAQVLAYVFQLRQYQKGKGRRPK 363 Query: 362 Q-PTHLPVPEALD 373 P P+P+ L Sbjct: 364 PIPLKQPIPDDLK 376 >UniRef50_C1D4I4 FlhB1 n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4I4_LARHH Length = 389 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 167/379 (44%), Positives = 254/379 (67%), Gaps = 2/379 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD ++TE TP R E+AREEGQ+PRSREL + + + GV+++ G L ++L + Sbjct: 1 MAEDSDLERTEEATPRRREQAREEGQVPRSRELATFTVTMTGVAMLVAYGGVLYQQLKEL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + L F + ++ + + + + ++++LP++ + ++AL++P ++GG S K+ Sbjct: 61 FARTLTFTRATLDAEDAAQLALRGGLTDGLVSILPILGVLFVLALVTPALIGGWNLSWKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++PKFSK+NPL GIKR+FS Q E KAILK++L+G V + +W+ +++ L S Sbjct: 121 VEPKFSKINPLSGIKRIFSVQGAIEGAKAILKSLLIGGVATWVIWNERAELVSLTRLSLD 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ A+DL L+V ++ +V DV FQ++ + K LRM+++D++ E K+SEG P V Sbjct: 181 QALARAVDLTLHTLLIVAGAMVLLVLIDVPFQLWQYSKNLRMTKEDVKKEMKESEGSPEV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ+QR AARRRMM+DVP A V++ NPTHY+VAL+Y+ + M+APKV+AKG+ VA R Sbjct: 241 KGRIRQLQREAARRRMMSDVPNASVVITNPTHYAVALRYE-DGMAAPKVIAKGSMKVAER 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I E+ EN V L APP ARALY ++EIG IP LY+A A+VLA+V+QL+ + GG Sbjct: 300 IIELARENRVTILRAPPFARALYFNSEIGDDIPAALYSAAAQVLAYVFQLRAYEKHGGIA 359 Query: 360 PVQPTHLPVPEALDFINEK 378 PV P LPVP LD + Sbjct: 360 PVYPDKLPVPPDLDPQTRQ 378 >UniRef50_B9Z6P8 Flagellar biosynthetic protein FlhB n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6P8_9NEIS Length = 388 Score = 436 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 162/382 (42%), Positives = 254/382 (66%), Gaps = 2/382 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD ++TEA T RL++AREEG IPRSREL++ + + GV+++ G L + + Sbjct: 1 MAEDSDLERTEAATGRRLQQAREEGNIPRSRELSTFAVTMTGVALLMAMGERLGNFMLQL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + FDH ++ + +L + + + +L L+PL G+ LVA+ +P+++GG + K Sbjct: 61 MRRLFTFDHDMVQHTDPVLLRFKESLTDTLLQLMPLFGGLALVAVAAPLLVGGWNLTFKG 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++PK SKLNP GI+RMFS E LKAILK++++G V + +W+ +++ L+A Sbjct: 121 IEPKLSKLNPAHGIQRMFSLSALTEALKAILKSVVIGGVATWVIWNERAELIGLIAMPLE 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 TA+G M L LLVV ++ +V DV FQI+++ K+LRM++++++ E+K+ EG P V Sbjct: 181 TALGKMMQLTFHTFLLVVGAMLLLVVVDVPFQIWNYHKQLRMTKEEVKQEYKEQEGSPEV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ+QR AA+RRMM ++P A+VIV NPTHY+VAL+Y E M AP+V+AKG +A + Sbjct: 241 KGRIRQLQRQAAQRRMMQEIPSANVIVTNPTHYAVALKYTEG-MRAPQVIAKGRLKLAEK 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I + G E+ V + P ARALY H+E+G+++P +LY A A++LA+V+QLK + GG Sbjct: 300 IIDTGREHRVTVMRVPSFARALYFHSELGEEVPSRLYGAAAQILAYVYQLKLYEYNGGLA 359 Query: 360 PVQPTHLPVPEALDFINEKPTH 381 PV P H+ VP LD +++ Sbjct: 360 PVYPEHVEVPADLDPESKRQQD 381 >UniRef50_A6W0V5 Flagellar biosynthetic protein FlhB n=2 Tax=Marinomonas RepID=A6W0V5_MARMS Length = 378 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 147/375 (39%), Positives = 243/375 (64%), Gaps = 1/375 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 +++ +KTE+ + +L+ AR +G +PRS++L+S L+L+V + I+ G L R L+ + Sbjct: 4 NEDGSEKTESASSKKLQDARNKGNLPRSKDLSSALLLIVAAATIYGTGTLLVRDLAVLFD 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + + + D + ++ + + M +++ L++ + + ++ + LGGL FS + L Sbjct: 64 FNFLVERADVFDLSRMVFHLYESVVAMMDSMVLLMAVLAVAGIVGSIALGGLNFSWEPLT 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK SK++P+ G+KRMFS Q+ EL K+I K LVG V+ + + P+ + L +S A Sbjct: 124 PKLSKMSPIAGLKRMFSVQSLVELFKSIAKVTLVGIVSVLVVNYFLPETLGLTFQSIELA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + + +D+V + V L + + DV FQ++SH +KL+M++Q+++DE+KQ EGDP V+G Sbjct: 184 IAHGIDIVIWSFVFVTLALALIAAIDVPFQVWSHKEKLKMTKQEVKDEYKQQEGDPLVRG 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQMQR AA RMM+DVP ADVI+ NPTH+SVAL+YD+ +AP ++AKG +AL+IR Sbjct: 244 RIRQMQRQAAMNRMMSDVPSADVIITNPTHFSVALKYDQAGGAAPVLLAKGGDFIALKIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 E+G ++P +++P LARA+Y H EIG +IP L+ VA++LA+V+QL+ R+ G RP Sbjct: 304 EVGNHYDIPVIQSPALARAIYHHTEIGDEIPQGLFKVVAQLLAYVYQLRNARM-GAPRPE 362 Query: 362 QPTHLPVPEALDFIN 376 +L VP+ + Sbjct: 363 TMPNLDVPDEFQWDG 377 >UniRef50_Q2Y9F9 Flagellar biosynthetic protein FlhB n=2 Tax=Betaproteobacteria RepID=Q2Y9F9_NITMU Length = 392 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 169/382 (44%), Positives = 255/382 (66%), Gaps = 5/382 (1%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS+ESD ++TE +P RLEK+REEGQ PRS EL++ +L+ + +W G L+ +L+ + Sbjct: 1 MSEESDQERTEPASPRRLEKSREEGQAPRSTELSTFALLIAAGTGLWLMGGHLSSQLARL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + G+H +P + ++ A++ P + ++LVAL++P++L G +FS KS Sbjct: 61 MKEGMHIPRETGFEPARLAERLFDQSFHALITFAPFLILMILVALVAPMLLSGWLFSWKS 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P F ++NPL G+ RMFS + EL KA+LK L+G + +WH+ ++ L+A + Sbjct: 121 LNPDFKRINPLSGLSRMFSLHSLLELAKALLKAALIGGAGVWTIWHYKESVLSLIARPLV 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + + +LV L + +I + DV F+++ H +KLRM+++++R E K++EG+P + Sbjct: 181 PGLTHMGELVALSFFSIAGTMILIATVDVPFKLWDHYRKLRMTKEEVRQENKETEGNPQI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR QR AR+RMM ++P+ADVI+ NPTHYSVAL+Y++ KM AP+VVAKG L+AL+ Sbjct: 241 KGRIRAQQREMARKRMMTEIPRADVIITNPTHYSVALRYEDGKMRAPRVVAKGMHLLALK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR---WRLAG 356 IREIG ++ VP LEAPPLARALY+H E+G +IP LY VAEVLA+V+QL+R + +G Sbjct: 301 IREIGHQHKVPVLEAPPLARALYQHTELGDEIPQTLYNVVAEVLAYVYQLRRHQQYGPSG 360 Query: 357 GQRPVQPTHLPVPEALDFINEK 378 G+ PV P L VP LD N+ Sbjct: 361 GKAPVLP-ELDVPVELDPENKA 381 >UniRef50_A1WUA6 Flagellar biosynthetic protein FlhB n=3 Tax=Gammaproteobacteria RepID=A1WUA6_HALHL Length = 391 Score = 426 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 155/381 (40%), Positives = 235/381 (61%), Gaps = 1/381 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S++ +KTE PTP R E++R++GQ+PRSRELT++L+LLV + G + +L+ +L Sbjct: 5 SEDGQEKTEDPTPKRREESRKKGQVPRSRELTTMLLLLVAAGALLALGPFMGNQLTALLE 64 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 D S I DP +++ ++ + +L +LP I+ ++ A+I+P LGG FS +Q Sbjct: 65 WSFTIDRSHIYDPGIVIERLHEALGRGLLTVLPFIAVMLAAAVIAPTALGGWSFSFHPMQ 124 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK KL+P+ G +RMF + EL KA+ K +++G W + + Sbjct: 125 PKPEKLSPIKGFQRMFGTKAAVELGKALGKVLVIGGTAVGLFVLFWDNFYTMSRAPLEPS 184 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 M M L + L+ L ++ +V D+ +QI+ H +K+RM+RQ++++EFKQ+EG P VK Sbjct: 185 MAEGMRLFYIFFFLLALSMLVVVAIDIPYQIYDHTQKIRMTRQEVKEEFKQTEGKPEVKQ 244 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 R+R+ QR RRMM +VP ADV++ NP HY+VAL+YD++ M AP VVAKGA L+A RIR Sbjct: 245 RVREQQREMTNRRMMENVPDADVVITNPAHYAVALKYDQSTMRAPTVVAKGADLLAARIR 304 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 E+ EN++ +APPLARALY A++ Q+IPG LY AVA+VLA+V+Q + + G P Sbjct: 305 ELAEENDILIFQAPPLARALYHSADLDQEIPGALYFAVAQVLAYVYQFQAAQRRGWTPPQ 364 Query: 362 QPTHLPVPEALDFINEKPTHE 382 +P VP D E + E Sbjct: 365 RP-EPEVPSGYDTGGEASSDE 384 >UniRef50_C3K0I5 Putative flagellar biosynthesis-related protein (Flagellar biosynthetic protein flhb) n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K0I5_PSEFS Length = 378 Score = 426 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 150/372 (40%), Positives = 234/372 (62%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S+ DKTE PT R + +RE+G+I RS+EL ++ ++ G + G LA L ++ Sbjct: 4 SESGQDKTEDPTEKRKKDSREKGEIARSKELNTVATMMAGSGALLIYGGGLALDLMELMK 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 ++ +P+ + ++ + A+LA+ P++ ++L ALI PV LGG +F+ S+ Sbjct: 64 HNFALPREVLLNPDAMGQYLLHSGKIAILAVQPILITLLLAALIGPVALGGWLFAAGSMA 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PKFS++NP G+KRMFSA+ ELLKA+ K IL+ V L ++R+ E +A Sbjct: 124 PKFSRMNPGAGLKRMFSAKALVELLKALAKFILILFVALMVLSSDIDDLLRIAHEPLESA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + +++ +VG AL + G+I + D Q++ KKL M++Q++RDE K EG P VK Sbjct: 184 IIHSVQVVGWSALWMAAGLIIIAAVDAPIQLWESHKKLLMTKQEVRDEHKDQEGRPEVKQ 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQ+QR ++R+MMA VP ADVI+ NPTHY+VAL+YD K AP ++AKG+ AL+IR Sbjct: 244 RIRQLQREMSQRKMMASVPDADVIITNPTHYAVALKYDPEKGGAPMLLAKGSDFTALKIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 EI +++ LE+P LAR+++ ++ Q+IP LY AVA+VLA+V+Q++++R G+RP Sbjct: 304 EIAVAHDILLLESPELARSIFYSTDLDQEIPAGLYLAVAQVLAYVYQIRQYRSGKGKRPD 363 Query: 362 QPTHLPVPEALD 373 LP+P L Sbjct: 364 PLKDLPIPPELR 375 >UniRef50_B8FK32 Flagellar biosynthetic protein FlhB n=4 Tax=Bacteria RepID=B8FK32_DESAA Length = 358 Score = 426 bits (1096), Expect = e-118, Method: Composition-based stats. Identities = 134/356 (37%), Positives = 222/356 (62%), Gaps = 2/356 (0%) Query: 1 MSDE-SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D ++DKTE PTP + + AR++GQ+ +SR+L+S+++L+ G+ +++ G + ++ + Sbjct: 1 MADSPNEDKTEQPTPKKRDDARKKGQVAKSRDLSSVVVLMAGLGIMYMFGPYMHYHITSL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + D S I ++RE + L P+++GV +V S + G FS ++ Sbjct: 61 MENIFTTDVS-AWGVEEINTLGREMVREFLFILAPILAGVFVVGFASAAVQVGFYFSWEA 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 PKFSK+NP+ G RMFS Q EL K++ K +VG ++ + ++ L Sbjct: 120 AAPKFSKINPISGFGRMFSKQALVELAKSLAKLFIVGFISYLTIEAEMDNLILLGQVDAA 179 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + + ++ + V + ++ + D FQ + H ++L+M++Q+++DE+KQ++GDP V Sbjct: 180 NTLAYVLKIILKLFIRVGIIMVFVAVLDFAFQKWHHEQQLKMTKQEVKDEYKQTDGDPMV 239 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RIR++Q AARRRMM +VPKADV+V NPTH ++A++Y+ M AP +VAKGAG +A + Sbjct: 240 KARIRRIQMEAARRRMMEEVPKADVVVTNPTHLALAIKYNALTMGAPLIVAKGAGPIAQK 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 I+E+ EN+VP +E LARALY+ +IG ++P LY AVAEVLA+V+ LK+ R Sbjct: 300 IKEVARENDVPIVENKELARALYKVVDIGDEVPVALYEAVAEVLAYVYGLKQNRAR 355 >UniRef50_A3DCP3 Flagellar biosynthetic protein FlhB n=14 Tax=Clostridia RepID=A3DCP3_CLOTH Length = 392 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 126/354 (35%), Positives = 202/354 (57%), Gaps = 2/354 (0%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 ++ +KTE TP + KAREEGQ+ +SREL S ++LL + G + + L Sbjct: 39 DNGEKTEKATPRKRSKAREEGQVLQSRELNSAIVLLSAFVTLRIFGQYMYEEILKCLKVA 98 Query: 64 LHFDH--SIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + + + + + + P++ V++ + S G +F+ K+L Sbjct: 99 ITVYPLNDGLFTIDGLFELYGETVITFLKIATPVLMVVLIAGIGSAYAQVGFLFTTKTLG 158 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 K S++NPL G KR+FS ++ ELLK+I+K LVG + ++ ++ +M +++ Sbjct: 159 IKLSRINPLKGFKRIFSLKSLVELLKSIIKIALVGYIGYGYIKGEMTNVLGMMDVDVVSS 218 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + A+ + + + + D +Q + + K LRMS+Q+I++E K+ EG+P +K Sbjct: 219 ASFLGSTILNAAIRMCIAFVVIGVADYGYQWWEYEKSLRMSKQEIKEENKEVEGNPEIKS 278 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQ QR + RRM+ D+PKADV++ NPTHY+VA++YD + AP VVAKG +ALRI+ Sbjct: 279 RIRQKQRQMSMRRMLQDIPKADVVITNPTHYAVAIKYDPKEADAPVVVAKGQDYMALRIK 338 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 EI E+ V +E PLA+ LY+ EIG +IP +LY AVAEVLA+V+ LK Sbjct: 339 EIAKEHKVEIVENKPLAQTLYKTVEIGGKIPPELYQAVAEVLAFVYSLKEKMKK 392 >UniRef50_Q3J977 Flagellar biosynthetic protein FlhB n=3 Tax=Gammaproteobacteria RepID=Q3J977_NITOC Length = 377 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 154/375 (41%), Positives = 242/375 (64%), Gaps = 2/375 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D S ++TE PTP R E+AR++GQ+PRSREL++ ++LL + G L + L+ + Sbjct: 1 MADSSAQERTEQPTPKRQEEARKKGQVPRSRELSTTVLLLSSALGLVLIGEPLLQGLADL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + GL + + I +P + Q + EA+ + P ++ ++ AL +P+++GG FS +S Sbjct: 61 MRQGLQLERAQIFEPKAAILQFQQGVGEAVKIITPFLALTLIAALAAPLLMGGWSFSAQS 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L K+ KLNP G+KR+F Q G ELLKA++K +L+ V W P ++ L + + Sbjct: 121 LGFKWEKLNPAKGMKRIFGPQGGMELLKALIKFLLLSGVGCLLFWLFSPDLIALGRQPFV 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ L+G + + + + D FQ ++H ++L+M+RQ++++E K+++G+P + Sbjct: 181 PAVFQLAHLMGWSLVGLSASLALIAVIDAPFQGWNHTRQLKMTRQEVKEEHKETDGNPEL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR++QR A RRMMA VP+ADV+V NPTHY+VAL Y+++K AP+VVAKG VA++ Sbjct: 241 KGRIRRVQREIASRRMMAAVPQADVVVVNPTHYAVALNYEQDKQGAPRVVAKGVDQVAIK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IR + A NNVP L AP L+RA+Y ++ Q+IP LY AVA+VLA+V QL++++ GG R Sbjct: 301 IRTVAAGNNVPVLSAPALSRAIYHSTKLDQEIPAGLYRAVAQVLAYVLQLRQYQRRGGPR 360 Query: 360 PVQ-PTHLPVPEALD 373 P P P+PE L Sbjct: 361 PQPIPNEFPIPEDLR 375 >UniRef50_Q47I36 Flagellar biosynthetic protein FlhB n=1 Tax=Dechloromonas aromatica RCB RepID=Q47I36_DECAR Length = 379 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 170/373 (45%), Positives = 242/373 (64%), Gaps = 2/373 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD +KTE PT R+E+ARE+GQ+P SREL + L+L V + W G +R + Sbjct: 3 MAEDSDLEKTEEPTGRRIEQAREQGQVPHSRELATFLVLAVAGATFWMMGSWFMQRSLVI 62 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + G + + DP+L+L ++ + +A+ PL+ ++L A++ P L VFS K+ Sbjct: 63 MQKGFFVESRYMRDPDLMLPRLAEISGDALFVFSPLLGLLLLAAILPPFFLNAWVFSPKA 122 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P ++LNPL G RMFS + EL KA+LK +LVG V +W ++ L+ E Sbjct: 123 LVPDLNRLNPLSGFGRMFSWNSLMELAKAVLKAVLVGGVAAMLIWKERDEIFGLLGEPLE 182 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + +A LV L++V ++ +V DV FQ++ + KL+MS+++++ E K+ GDPHV Sbjct: 183 VGLAHAGHLVSFSFLILVATLVLVVVADVPFQLWQYFDKLKMSKEEVKQEMKEMMGDPHV 242 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR +Q AAR+RMM+ VPKA+V+V NPTHY+VAL Y M APKVVAKG G VAL+ Sbjct: 243 KGRIRSLQMQAARKRMMSAVPKANVVVTNPTHYAVALAYQTG-MGAPKVVAKGVGAVALK 301 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I+EI E+ VP +EAPPLARALY+H+E+ +IP LY AVAEVLA+++QL WR GG Sbjct: 302 IKEIANEHAVPIMEAPPLARALYKHSELDTEIPSALYNAVAEVLAYIYQLANWRQVGGIY 361 Query: 360 PVQPTHLPVPEAL 372 PV P LPVP L Sbjct: 362 PVPPRDLPVPPEL 374 >UniRef50_B8EA03 Flagellar biosynthetic protein FlhB n=22 Tax=Gammaproteobacteria RepID=B8EA03_SHEB2 Length = 376 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 146/364 (40%), Positives = 230/364 (63%), Gaps = 1/364 (0%) Query: 12 PTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSII 71 PT RLE+ARE+GQI RS+EL + +L+ + G SLA L+ + D + I Sbjct: 13 PTGRRLEQAREKGQIARSKELGTAAVLISAACGFYMLGPSLATSLTRVFETVFTMDRAQI 72 Query: 72 NDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLP 131 D + ++ E + ++ +V+VA I V LGG+ FS +++ PK SK++P Sbjct: 73 FDTEEMFNVWGVVASEIAWPMAKIMLLIVVVAFIGNVALGGMNFSTQAMMPKASKMSPAA 132 Query: 132 GIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGL 191 G+KRMF Q EL K I K +V L ++ +M L ++ + +A+DL+ Sbjct: 133 GLKRMFGVQALVELTKGIAKFSVVAFSAYLLLSFYFNDIMLLSSDHLPGNVYHALDLLVW 192 Query: 192 CALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAA 251 +L+ ++ +V DV FQI++H K+L+M++Q+++DE+K +EG P VKGR+RQMQR A Sbjct: 193 MFILLCSSILLIVVIDVPFQIWNHNKQLKMTKQEVKDEYKDTEGKPEVKGRVRQMQRELA 252 Query: 252 RRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPT 311 +RRMMA+VP ADVIV NP H++VA++YD + +AP V+AKG VA +IREI E+N+ Sbjct: 253 QRRMMAEVPNADVIVVNPEHFAVAIKYDVQRSAAPFVIAKGVDDVAFKIREIAREHNIAI 312 Query: 312 LEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQ-PTHLPVPE 370 + APPLARA+Y ++ QQIP L+ AVA++LA+V+QL++++ G++P+ P + P+P+ Sbjct: 313 VSAPPLARAIYHTTKLDQQIPEGLFTAVAQILAYVFQLRQYQKGRGRKPIPVPLNQPIPD 372 Query: 371 ALDF 374 L + Sbjct: 373 ELKY 376 >UniRef50_A6GUU4 Flagellar biosynthetic protein FlhB n=1 Tax=Limnobacter sp. MED105 RepID=A6GUU4_9BURK Length = 376 Score = 419 bits (1078), Expect = e-116, Method: Composition-based stats. Identities = 159/375 (42%), Positives = 239/375 (63%), Gaps = 4/375 (1%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M++E+D +K + ++ KAREEG +PRSREL ++LL GV +++ G L + + Sbjct: 1 MAEETDQEKDLPASEQKIRKAREEGNLPRSRELGGGVVLLAGVGLLYTMGGELVSQSEKL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + GL D + D + + + +++E++ L+PL VV+ A++S + +GG +S K Sbjct: 61 MRQGLVLDRAQAFDTKHMGLKWVSMLQESLFILIPLFLVVVVAAIVSNIAVGGFNWSTKP 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+PK SKLNP+ G+K +FS AEL+KAILKT+++G V L + +L A Sbjct: 121 LEPKLSKLNPVKGLKNIFSVNGLAELVKAILKTVVLGGVGYLLLMQDLGEFTQLSAMPLE 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 M + AL++ + + +V DV +Q++ + K LRM+ ++++ E K+S+GDPH+ Sbjct: 181 HGMAETARITIKDALILAIAFLLIVSIDVPYQLWRYYKGLRMNLEELKRESKESDGDPHL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KG+I+ MQR AARRRMMA VP ADVIV NPTHYSVAL+YD++ AP+VVAKG G +AL+ Sbjct: 241 KGKIKSMQREAARRRMMASVPNADVIVTNPTHYSVALKYDKDGKGAPRVVAKGIGPLALK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+ EN VP +EAPPLARALY + E+ Q+IPG LY AVA++LA+V+ L G Sbjct: 301 IREVAQENKVPLVEAPPLARALYSNVELEQEIPGALYTAVAKLLAYVYAL---AEGKGHM 357 Query: 360 PVQPTHLPVPEALDF 374 P +P+ +D Sbjct: 358 VEVPGEADIPKGMDP 372 >UniRef50_Q2NX25 Flagellar biosynthetic protein FlhB n=7 Tax=Enterobacteriaceae RepID=Q2NX25_SODGM Length = 387 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 198/374 (52%), Positives = 272/374 (72%), Gaps = 1/374 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M++ESD +K+EAPTPHRL+KAR+EGQ+PRS+EL S L+LL G S++W G LA+ + M Sbjct: 1 MAEESDLEKSEAPTPHRLQKARKEGQVPRSKELVSWLMLLSGWSLLWLAGGHLAQGMGLM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L +GL F I D + +L Q L+R+A+LA PLI GV LVA +P+++GG++FS K+ Sbjct: 61 LESGLTFSFHINGDRHWLLAQFSGLVRQALLACAPLILGVTLVAAGAPMLIGGVMFSSKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + +LNP G+KR+FS Q AE +K + K LVG G LW WP+M +L +P Sbjct: 121 VSLDLKRLNPFSGLKRLFSMQMIAEFIKTLFKVCLVGGACGTALWFVWPRMTQLAQGAPH 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 M ++ L+ C L+++L +IP+VGFD+ +Q+FSH+KKLRMSR DIR+E+K+ EGDP + Sbjct: 181 RVMAESLSLISQCVLVIILALIPVVGFDILYQLFSHMKKLRMSRHDIREEYKEQEGDPQL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K IRQ QR A++RMM DV KADV++ NPTHY+VAL+Y++ +M+ P+++AKGAG VAL Sbjct: 241 KSLIRQRQRQQAQQRMMQDVAKADVVILNPTHYAVALKYEQMRMTTPRLLAKGAGAVALN 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IR+ ++ +PTL APPLARAL+RH EIG IP LY AVAEVLAWV+ L+RWR GG R Sbjct: 301 IRQRAEQHRIPTLVAPPLARALFRHCEIGSAIPVALYGAVAEVLAWVYGLRRWRKQGGLR 360 Query: 360 PVQPTHLPVPEALD 373 P QP +L VP+A+D Sbjct: 361 PRQPGNLTVPKAMD 374 >UniRef50_B9ZRA6 Flagellar biosynthetic protein FlhB n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRA6_9GAMM Length = 383 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 147/370 (39%), Positives = 231/370 (62%), Gaps = 4/370 (1%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 ++ +KTE PTP RL +A+E+GQ+PRSREL++ L+L+ + F G +L +L+ + Sbjct: 4 NESGQEKTEQPTPKRLREAKEKGQVPRSRELSTFLVLMAAGGFMTFFGPTLGGQLAEQTA 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + + D +L+L + I + LLPL +++ A+++P+++GG FS ++ + Sbjct: 64 GRFDIERDLAYDSSLLLPYLSEQIFMTLRTLLPLFGVLMVAAVLAPILIGGANFSWQAAK 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK SKLNPL G+KR+FS Q E K K +LV V LW +++ L E A Sbjct: 124 PKASKLNPLKGLKRIFSWQGLMEFGKTFAKFVLVAGVAMSVLWTFSDRLLMLGYEPLEQA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + +A L + V +I + D FQ+++H K+LRM+RQ+++DE+K+++G P VK Sbjct: 184 ITHAAQLALGTFVAVSAALILVAAIDAPFQMWNHQKQLRMTRQELKDEYKETDGKPEVKQ 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 +IRQ+Q+ A+RRMM +VPKADV++ NPTHY+VA+ Y+ ++M+APK+VAKG VA IR Sbjct: 244 KIRQLQQEMAQRRMMEEVPKADVVITNPTHYAVAITYEASRMAAPKLVAKGVDEVAASIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 + E+ + +EAP +ARA+Y ++ Q+IP L+ AVA +LA+V+QLKR Sbjct: 304 AVADEHKIIRVEAPRVARAIYFTTDLNQEIPNGLFVAVARILAYVYQLKR----SDADVA 359 Query: 362 QPTHLPVPEA 371 P LPVPE Sbjct: 360 MPDDLPVPED 369 >UniRef50_B1HQX6 Flagellar biosynthetic protein n=17 Tax=Bacillaceae RepID=B1HQX6_LYSSC Length = 362 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 126/349 (36%), Positives = 214/349 (61%), Gaps = 1/349 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE TP + + AR++GQ+ +S+++TS +++L+ ++F SL L Sbjct: 13 SGEKTEKATPKKRQDARKKGQVVKSQDVTSAIVMLMVFIFLFFFAGSLRDELLAFFRQTF 72 Query: 65 -HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 H + ++ I + + ++P+++ V+ AL + G +F+ + ++ Sbjct: 73 IHNIRIETLTIDSVMHLFIDTLIQMAFIIVPIMAIAVVGALAGNFLQFGFLFTLEPMKFD 132 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG 183 K++P+ G+KR+FS + ELLK++LK +GSVT +W + P+++ L +SP + Sbjct: 133 LKKMDPIKGLKRIFSVKAIVELLKSVLKIGFIGSVTTIIIWTNLPEVLALSFKSPWITLI 192 Query: 184 NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRI 243 LVG+ + L ++ + D +Q F + K L+MS+QDI+DE+K SEGDP +K +I Sbjct: 193 TVGKLVGIMGIAASLVLLCVSILDWLYQKFDYEKNLKMSKQDIKDEYKNSEGDPLIKSKI 252 Query: 244 RQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREI 303 +Q QR A RRMM+++P ADV++ NPTHY++AL+YDE M AP+V+AKG +A +I+ I Sbjct: 253 KQRQREMAMRRMMSEIPSADVVITNPTHYAIALKYDEESMDAPRVIAKGTDFIAQKIKLI 312 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 E++V +E PLARA+Y EIG +P + + AVAE+LA+V+++KR Sbjct: 313 AKEHDVIMVENRPLARAMYDQVEIGDPVPEEFFKAVAEILAYVYRIKRK 361 >UniRef50_B2UHW8 Flagellar biosynthetic protein FlhB n=6 Tax=Ralstonia RepID=B2UHW8_RALPJ Length = 387 Score = 416 bits (1069), Expect = e-115, Method: Composition-based stats. Identities = 172/387 (44%), Positives = 242/387 (62%), Gaps = 10/387 (2%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS+ESD +KTE +P RLE+AREEG +PRSREL S + V +W G S+ R S Sbjct: 1 MSEESDLEKTEPASPRRLEQAREEGDVPRSRELASFALTAVSAGGLWVMGDSIVRAASSF 60 Query: 60 LSAGLHFDH----SIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVF 115 L+ L F S + N + GQ + L +L ++++A +SP+ L Sbjct: 61 LARCLEFHRYNYTSGQDQWNYVTGQFMPLAMTLGGLML-----MLVIAALSPLALTRGAI 115 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 S K L P S+L L G+ RMFS + EL + ++K L+ V + ++ ++ L Sbjct: 116 SFKPLSPDISRLFKLQGLTRMFSLEGLMELPRLLIKLFLIAGVGWLLVRYYRGDLIELPQ 175 Query: 176 ESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 + AM + + + G+ L + ++ + DV ++ + +K RM+++++R E ++SEG Sbjct: 176 QDLGVAMRDTLHVAGVAFLCMAAVMMLVAAVDVPLSLWQYARKHRMTKEEVRKEHRESEG 235 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DPHVKGRIR +QR AA+RRMMADVPKADVIV NPTHY+VAL+Y E + AP+V+AKGA + Sbjct: 236 DPHVKGRIRNLQRQAAQRRMMADVPKADVIVTNPTHYAVALRYSEKEGGAPRVLAKGADM 295 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 VA +IRE+G E+ +P LEAPPLARALYRH EIG QIP LYAAVAEVLA+V+QL+R Sbjct: 296 VAAKIRELGTEHKIPILEAPPLARALYRHTEIGHQIPEALYAAVAEVLAYVYQLRRLHQV 355 Query: 356 GGQRPVQPTHLPVPEALDFINEKPTHE 382 GG+ PV+PT LPVP LD + + Sbjct: 356 GGRVPVRPTDLPVPAELDPGPQPGPDD 382 >UniRef50_P35538 Flagellar biosynthetic protein flhB n=10 Tax=Bacillales RepID=FLHB_BACSU Length = 360 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 128/348 (36%), Positives = 211/348 (60%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +KTE TP + + R++GQ+ +S ++ + + LLV + G + RL + Sbjct: 11 AGEKTEKATPKKRKDTRKKGQVAKSSDVNTAVSLLVIFLSLIAIGPYMRDRLLSFIETFY 70 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 ++ + + + L+++ + L P++ ++ ++S M G +FS + +QPK Sbjct: 71 TESLTMKLSESNVHTLFVSLLKDMGMILAPILLVALVAGVVSNYMQVGFLFSAEVIQPKL 130 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KL+P+ G KR++S + EL+K+ILK ++VG LW H+ +++RL +P A+ Sbjct: 131 EKLDPIKGFKRIYSMRAIVELIKSILKIVVVGFAAFAVLWLHYGEILRLPLLTPEEALSF 190 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 L L ++ + G D +Q F + K ++MS+QDI+DE+K+SEGDP +K +I+ Sbjct: 191 VSKLTLWMGLSGAGALLILAGLDYLYQRFDYEKNIKMSKQDIKDEYKKSEGDPIIKSKIK 250 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q QR A RRMM +VPKADVI+ NPTHY++AL+YDE KM AP +VAKG +AL+IR+I Sbjct: 251 QRQREMAMRRMMQEVPKADVIITNPTHYAIALKYDEEKMDAPYIVAKGVDHLALKIRKIA 310 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 E++V +E PLARALY EI Q +P + + +AE+LA+V++ K+ Sbjct: 311 KEHDVMMVENRPLARALYDQVEIDQAVPEEFFKVLAEILAYVYKTKQK 358 >UniRef50_D0I461 Flagellar biosynthesis protein FlhB n=2 Tax=Vibrionaceae RepID=D0I461_VIBHO Length = 375 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 138/374 (36%), Positives = 222/374 (59%), Gaps = 1/374 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MSD S DKTE P+ ++ KAREEG +PRSREL + L+++ ++ ++ + + Sbjct: 1 MSDSSAQDKTERPSEQKIRKAREEGNLPRSRELVTALMMVASALLLSAFSSAIHHTIVSV 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L+ D I P+ + + A AL PL + ++LV++ + ++ GG S K+ Sbjct: 61 SEMTLNIDKDTIFSPDKMGELLWQSAILATQALAPLFALIMLVSIGANLLRGGWNISTKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + PK SKLNPL GIKR+FSA + EL+K+ILK +G + + H+ +++ L Sbjct: 121 MMPKLSKLNPLSGIKRIFSANSLVELIKSILKVTFIGGALYWLINHYLNEIIALQHTRLS 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ +DL+ + L ++ + ++ + + ++KKL+M++Q++++E K +EG P + Sbjct: 181 AAIPAFLDLLWTGLFVYGLVLLFIAVLEMPYSSYEYIKKLKMTKQEVKEEHKNTEGRPEI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RIRQ+QR ++R VP ADVI+ NPTHY+VAL+YD +K +AP V+AKG AL+ Sbjct: 241 KARIRQLQRQMSQRAFAKTVPTADVIITNPTHYAVALKYDLSKANAPFVIAKGVDQAALQ 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IR+I ++ +P +E PPLARA+Y Q+IP QLY AVA VL +V+QL +++ Sbjct: 301 IRQIAQQHGLPVVEVPPLARAVYYSTNEWQEIPAQLYVAVAHVLNYVFQLDQYKKGRQSN 360 Query: 360 PVQPTHLPVPEALD 373 + VPE L Sbjct: 361 RPTFPTVVVPEELR 374 >UniRef50_B8CYQ0 Flagellar biosynthetic protein FlhB n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYQ0_HALOH Length = 356 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 116/352 (32%), Positives = 204/352 (57%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 ++S +KTE PTP RL KAR++GQ+ +S+EL+S L+ G V++F ++ L+ +S Sbjct: 4 NQSGEKTEKPTPRRLRKARQQGQVAKSQELSSAFTLMGGFLVLFFIIKNIIYSLTNRMSY 63 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 L + + L +I + P++ ++ L+ + G +F ++P Sbjct: 64 FLSLEAYNKINDVNSLYILIDSFYFIARLISPVLLASAIIGLVVNFLQVGPLFVPDLIKP 123 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 K+NP+ G KR+FS ++ EL+K++ K +V + L + W ++ L + A+ Sbjct: 124 DLKKINPISGFKRLFSLKSVVELIKSLFKIAIVAILAYLQLKNSWQTLINLSRQGITEAV 183 Query: 183 GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 L+ A+ +++ ++ + D +Q + +++ L+M++Q++++E K+ EGDP +K + Sbjct: 184 AYLGHLIFKVAITIIICLVVLGIADYIYQKWEYIRNLKMTKQEVKEEHKEIEGDPRIKSK 243 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 R+ QR RM+ + +ADV++ NPTH +VAL+YD N M AP VVAKG G +A +I+E Sbjct: 244 RREKQREMTLNRMIKAMEEADVVITNPTHIAVALKYDINSMEAPVVVAKGEGFIAKKIKE 303 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 E + +E PLARAL EIG++IP LY AVAEVLA++++ ++R Sbjct: 304 KARELKIEIVENKPLARALNATTEIGEEIPVDLYQAVAEVLAFLYKNNKYRP 355 >UniRef50_B4RUM4 Flagellar biosynthesis protein n=3 Tax=Alteromonadales RepID=B4RUM4_ALTMD Length = 374 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 142/374 (37%), Positives = 222/374 (59%), Gaps = 2/374 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D S +KTE PT +L+ AR++GQ+ RSREL++ L+L+V + F G +A + + Sbjct: 1 MADSS-EKTEDPTGKKLDDARKKGQLARSRELSTTLVLIVSAVMFLFVGGWIAESVFKLT 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 D + G A+L + ++ + + LGG F+ + Sbjct: 60 RRMFILSRDETYDITHMFGAWGEAFSAVGPAVLLYMVVAMIAGIYGSIALGGFNFTWEGA 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PK SK++P+ G KRMF ELLK+I K +++ + L + + L E Sbjct: 120 KPKGSKMSPIQGFKRMFGTNGLVELLKSIAKVVVIIGMAIGALLFFEDEALHLDMELYPG 179 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + +AMD++ L++V G+IP+ DV +Q++ H K+++M++Q+++DE K +EGDP VK Sbjct: 180 NLFHAMDILKWAFLILVCGMIPIALIDVPYQMYKHNKEMKMTKQEVKDERKNAEGDPMVK 239 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GRIR++Q AA +RMM +VP+ADV+V NPTH+SVA++YDE + AP VVAKGA +A+ I Sbjct: 240 GRIRRLQYQAATKRMMQEVPQADVVVTNPTHFSVAIKYDEKGIRAPVVVAKGADELAMHI 299 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 R+I N+VP + +P LARA++ E+ +IP L+ AVA+VLA V+QLK R G+RP Sbjct: 300 RKIATANDVPLIPSPMLARAIFYSTEVDDEIPNALFMAVAQVLAHVYQLKAHRAGKGKRP 359 Query: 361 VQPT-HLPVPEALD 373 LP+P Sbjct: 360 KPLKRDLPIPPEYR 373 >UniRef50_Q2LT07 Flagellar biosynthesis pathway component n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LT07_SYNAS Length = 354 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 134/353 (37%), Positives = 204/353 (57%), Gaps = 2/353 (0%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ ++TE TP R E+ARE+GQ+ +SR+L S+ IL + +FG S +L Sbjct: 1 MAESNKDQERTEEATPKRREEAREQGQVAKSRDLASVAILSACLLYFYFGANSFLHQLMD 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 ++ + S + I + + + + P + V + AL S ++ G S K Sbjct: 61 LMKSSFSSLDSSLVTTENIQSLLFSAFYKTITLMTPFLLVVCIAALSSNILQVGFKISTK 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 ++ PK SK++P G R+FS Q+ E +K+I K + G V + ++ L S Sbjct: 121 AIAPKLSKIDPAKGFARLFSLQSLIEFIKSIFKISIAGFVAYLTVKSELVDILPLADSSV 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + L +I + D +Q + + + L+MSRQ+I+DE KQ+EGDP Sbjct: 181 WEILVYITGTSFRILLTTCWVLIILALMDYLYQRWEYERNLKMSRQEIKDENKQTEGDPI 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK RIR++QR A+RRMMA+VPKADVI+ NPTH +VALQYD++ M APKV+AKGAG +A Sbjct: 241 VKARIRRLQREMAQRRMMANVPKADVIITNPTHLAVALQYDQDSMIAPKVIAKGAGYLAE 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +I+EI E+ VP +E PLA+ LY+ E+ IP LY AVAE+LA+++ +KR Sbjct: 301 KIKEIARESRVPLVENKPLAQVLYKMVEVSGTIPDSLYKAVAEILAYIYSIKR 353 >UniRef50_D0KYP0 Flagellar biosynthetic protein FlhB n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYP0_HALNC Length = 379 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 151/380 (39%), Positives = 220/380 (57%), Gaps = 6/380 (1%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 ++ +KTE P+ RL +ARE+GQ+ RSREL SL + V G + RL M Sbjct: 4 NENGQEKTEEPSEKRLREAREKGQVARSRELGSLALTAGSAIVFLVMGGHMLSRLEQMFR 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + I DP + ++ L E LALLP V++A+ S +++GG FS ++L Sbjct: 64 HAFTLSRAEIMDPATMFHRLALSFSEGFLALLPFFLAAVVLAVSSTLLVGGWNFSTQALA 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 P+F++LNPL G KRMFS ++ ELLK + K L+ ++ + L Sbjct: 124 PQFNRLNPLSGFKRMFSMKSLVELLKTLAKFFLIAAIAIGLFEAMEKDFVGLGLMGLEAG 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + A L+ L + LG++ + DV FQ++ + K LRM+RQ++ DE+K+ EG P VK Sbjct: 184 LARAGTLLSWSFLGLSLGLLVVAMIDVPFQMYEYKKGLRMTRQEMIDEYKEVEGKPEVKQ 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 +IRQ+QR A+RRMM VP ADVI+ NPTH+SVAL+Y N +AP VVAKGA +A+ IR Sbjct: 244 KIRQLQRQMAQRRMMEAVPTADVIITNPTHFSVALKYQPNSDAAPMVVAKGADEMAMTIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 +I N+VP E+P LAR+L+ H E+G IP LY AVA+VLA+V+Q+K G P Sbjct: 304 KIANANHVPLFESPQLARSLFAHVEVGDAIPSGLYVAVAQVLAYVFQMK-----GASAPP 358 Query: 362 QPTHLPVPEALDF-INEKPT 380 + VP+ + +P+ Sbjct: 359 ERPDPSVPDEFRAGPDGRPS 378 >UniRef50_C6NWP2 Flagellar biosynthesis protein FlhB n=2 Tax=Proteobacteria RepID=C6NWP2_9GAMM Length = 375 Score = 412 bits (1061), Expect = e-114, Method: Composition-based stats. Identities = 167/374 (44%), Positives = 251/374 (67%), Gaps = 3/374 (0%) Query: 1 MSDE-SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M++E S ++TEA TP + E AR++GQ+PRSREL++ +LL+ S+++ G + + Sbjct: 1 MAEEQSQERTEAATPKKREDARKKGQVPRSRELSTSALLLLSASLLYGLGSEIQTMATDF 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L AGL +++++ +L ++ + A+ +LPL ++LV +++ + LGG FS K+ Sbjct: 61 LRAGLRLTPAVMSNHQDLLRHLVQMAGLALSDVLPLWLALMLVVVLASIALGGWNFSTKT 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P FS L+P+ GI+R+FS + EL+KA LKT++VG + +W +++ L+ SP Sbjct: 121 LIPNFSHLDPIEGIQRLFSRRGFLELVKAALKTLVVGGIGVTVIWAQRGELLGLIQISPK 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 +AM + + + GL L++ +G + +V FDV FQ++S +KL+MSRQDI+DE K+ +G+P + Sbjct: 181 SAMVSLLSMSGLVFLIMAVGTLLIVLFDVPFQLWSFNEKLKMSRQDIKDEMKEMDGNPQI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K ++R MQR ARRRMMA +P A V+V NPTHY+VAL+Y E++ AP V+AKGAG VALR Sbjct: 241 KTKVRSMQREMARRRMMAAIPSASVVVTNPTHYAVALRYVESENRAPVVLAKGAGNVALR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+ E+ VP +EAPPLARALY H E+ Q+IP LY AVAEVLA++ QL+ GQ Sbjct: 301 IRELAQEHGVPLVEAPPLARALYHHVELEQEIPALLYRAVAEVLAYLHQLR--LAPPGQA 358 Query: 360 PVQPTHLPVPEALD 373 P VP LD Sbjct: 359 LELPEQWSVPPELD 372 >UniRef50_Q1NP88 Flagellar biosynthetic protein FlhB n=2 Tax=Deltaproteobacteria RepID=Q1NP88_9DELT Length = 356 Score = 412 bits (1060), Expect = e-114, Method: Composition-based stats. Identities = 142/352 (40%), Positives = 215/352 (61%), Gaps = 2/352 (0%) Query: 1 MSDES--DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++E +KTE PT RL +AR +G + +S E+ S +LL GV V++F G + R++G Sbjct: 1 MAEEQSGQEKTEKPTERRLLEARNKGDVAKSMEVPSAAVLLAGVIVLYFTGEYMFNRVTG 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 M+ L H I + ++ L PL+ V L AL + + G +F+ + Sbjct: 61 MMQFYLSNLHDIEISAASMPNITRQVMLLIYTVLWPLMLTVFLAALAANYLQVGFLFTAE 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + PK K++PL G+ R+FS QT K+I K LVG + + P+++ L ++P Sbjct: 121 KITPKLEKIDPLKGLGRLFSKQTLNNAFKSIAKFSLVGYIAYSEIIRAMPEILPLADKAP 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + ++ L + I + D FQ + ++K++M++QD++DE KQSEGDPH Sbjct: 181 YPILVFMVETAFWIFLKCAVLFILIALIDYAFQRWQFMEKMKMTKQDMKDESKQSEGDPH 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VKGRIR +Q A++RMMA+VPKADV+V NPTH +VA++YD M AP+V+AKGAG+VA Sbjct: 241 VKGRIRSIQMEMAKKRMMAEVPKADVVVTNPTHLAVAIKYDALTMKAPEVLAKGAGVVAN 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +I+E+ E+ VP +E PLA+ALY++ EIG IP L+ AVAEVLA+V+ LK Sbjct: 301 KIKEVAREHQVPVVEDKPLAQALYQNVEIGGSIPENLFQAVAEVLAYVYNLK 352 >UniRef50_C0ZF82 Flagellar biosynthetic protein FlhB n=4 Tax=Paenibacillaceae RepID=C0ZF82_BREBN Length = 365 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 130/346 (37%), Positives = 210/346 (60%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +KTE TP + + AR++GQ+ +S++L+ L L ++ G ++ ++ L Sbjct: 16 NGEKTEKATPKKKQDARKKGQVAKSQDLSPALSLTAFFFLLMMLGSTMLGTFQDLMRESL 75 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + + + ++ L+ EA+ + P++ LVA M G FS + LQ K Sbjct: 76 ITYTTWQLNEENLKVMVMQLVFEAIKIVGPILGLSFLVAFAVNYMQVGWHFSTEPLQMKL 135 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 K++P+ G KR+FS ++ ELLK++LK V LW+ Q+++L S + Sbjct: 136 EKIDPIKGAKRIFSLRSLVELLKSLLKISAGIYVAYVILWNAKEQVVQLSLLSLGAVLSF 195 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 + V + + L + + D +Q + H K LRMS+QD++DE KQ+EGDP +KG+IR Sbjct: 196 TAEEVTKLGIYLGLLLFILAVLDYAYQRYEHEKNLRMSKQDLKDEHKQAEGDPLIKGKIR 255 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + QR+ A RRMM ++PKADVI+ NPTH++VA++YD + MSAP V+AKG +AL+IRE+ Sbjct: 256 ERQRSMAIRRMMQELPKADVIITNPTHFAVAVRYDASAMSAPTVIAKGQDYLALKIREVA 315 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 ++ + T+E PLARALY E+GQQIP +++ AVAEVLA+V++L+ Sbjct: 316 KKHRIVTMENKPLARALYSQVEVGQQIPEEMFKAVAEVLAYVYKLQ 361 >UniRef50_A5I580 Flagellar biosynthetic protein n=19 Tax=Bacteria RepID=A5I580_CLOBH Length = 609 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 125/349 (35%), Positives = 203/349 (58%), Gaps = 1/349 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S++KTE TP + AR++GQ+ +S+EL LL V+ G A L ++ L Sbjct: 262 SEEKTEEATPRKKMDARKKGQVAKSKELALAFTLLACTLVLVALGEYGANELKETMAGFL 321 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + ++ + N + IL + +LP+ ++ + + + G +F+ + L+P F Sbjct: 322 NNYLNMELNYNNLNSLAILTVLRVGKIVLPVALPIMCFGIAANYLQTGFLFTKEPLKPDF 381 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNP+ G KRMFS +T ELLK + +VG V FL ++ +++ L P + Sbjct: 382 KKLNPINGFKRMFSLRTVMELLKDLTIITVVGIVGYKFLQDNYLKILNLGTLRPWYMITG 441 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 + L + L ++ + D +Q + + K L+M++Q++++E+KQ EGDP +K +I+ Sbjct: 442 LLSLAISIFFRITLIMLFIAVADYVYQKYQYNKDLKMTKQEVKEEYKQDEGDPQIKSKIK 501 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q QR A +RMM +VPKA V+V NPTH +VAL+Y++ +APKVVAKGA VA++I++I Sbjct: 502 QKQREMAMQRMMQEVPKATVVVTNPTHIAVALRYEKG-DTAPKVVAKGADYVAIKIKDIA 560 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 N VP +E PLAR +Y EI ++P +Y AVAE+LA V+ LK+ + Sbjct: 561 KNNEVPVIENKPLARLIYEKVEIDSEVPQDMYEAVAEILAIVYTLKKKK 609 >UniRef50_Q0AYL8 Flagellar biosynthesis/type III secretory pathway protein n=3 Tax=Clostridia RepID=Q0AYL8_SYNWW Length = 369 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 132/352 (37%), Positives = 204/352 (57%), Gaps = 1/352 (0%) Query: 2 SDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 +D+ +KTE TP R E+AR++GQ+ +S +L S +IL+ G + + L Sbjct: 16 ADDGMGEKTEKATPRRREEARKKGQVFKSTDLNSAIILIAGSVASFMAFPYMVNNLKSFT 75 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + L + I ++ ++ + P+ +VAL+ + G VFSG+SL Sbjct: 76 TLYLLQRTQQDFSNDYIYFMLLEVLIIMGKMIFPIFLTTFIVALLITYLQVGFVFSGESL 135 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK +LNP+ G KR+FS + EL K++LK I+ G + + H+ R + I Sbjct: 136 TPKLERLNPVEGFKRIFSKRALVELGKSLLKVIVTGYIVYSVMRKHYILFPRFIDMELIA 195 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + +V A+ V L I + D FQ + H K L+MS+ +I+ E+KQ+EGDP +K Sbjct: 196 GLQVLSSIVFEMAMKVGLVFIIIGIADYIFQWYEHEKSLKMSKYEIKQEYKQTEGDPQLK 255 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R R++QR A +RMMA+VPKADV++ NPTH++V L+Y+ +KM AP VVA+G +AL+I Sbjct: 256 SRQRRIQRDIAMQRMMAEVPKADVVITNPTHFAVVLKYEASKMEAPVVVARGKDFMALKI 315 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 +EI + V +E P LAR LY + EIG +P +LY AVAEVLA+V++ K+ Sbjct: 316 KEIARMHGVVIVENPVLARTLYYNTEIGDLVPEELYQAVAEVLAFVYKQKKR 367 >UniRef50_Q3V867 Flagellar biosynthetic protein FlhB n=5 Tax=Legionella RepID=Q3V867_LEGPH Length = 383 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 143/381 (37%), Positives = 238/381 (62%), Gaps = 3/381 (0%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+DE S +KTE P+ RL+++R++GQ+ RS++ + +ILL + G L+ +++ Sbjct: 2 MADEEQSQEKTEQPSSKRLKESRKKGQVARSKDFNATVILLFTGLGFFIFGKQLSLQIAS 61 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 ++ FD I+ N L + L + + +++PL+ + +++L++P+++GG VFSG+ Sbjct: 62 IMQQAFDFDRDILVTGNNSLENLFQLTKSGLWSVVPLLLVIFILSLLAPLLMGGWVFSGQ 121 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 S+QPKFS+LN L G+KRM S + E+LKA LK +LV S + L P ++ L Sbjct: 122 SIQPKFSRLNVLKGLKRMISLKGFVEMLKAFLKFVLVASASILVLRSQVPLLLELGKAPL 181 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ + + ++ +L+ +I + DV FQ++ H K ++M++Q+++DE+K++EG P Sbjct: 182 EIAITSGVMILLKSFVLISASLILIAAIDVPFQLYEHSKSIKMTKQELKDEYKETEGKPE 241 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK IR+ Q+ ARRRMM++VPKADVI+ NPTHY+VAL Y + AP V+AKG LVA Sbjct: 242 VKSAIRRAQQETARRRMMSEVPKADVILTNPTHYAVALSYQKKGKKAPVVIAKGKNLVAF 301 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +I ++ E+ +P + P LARA+Y ++ +IP LY AVA+VLA+++QL R R Sbjct: 302 QISKVAKEHKIPIISVPALARAIYFSTKLNAEIPRGLYVAVAQVLAYIFQL-RDRQRYDY 360 Query: 359 RPVQPTHLPVPEALDFINEKP 379 +P ++P+P L E+ Sbjct: 361 KPEILQNVPIPPELAREAEEE 381 >UniRef50_P57334 Flagellar biosynthetic protein flhB n=4 Tax=Buchnera aphidicola RepID=FLHB_BUCAI Length = 383 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 157/383 (40%), Positives = 255/383 (66%), Gaps = 1/383 (0%) Query: 1 MS-DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+ + +++KTE PT HR+ K R++G+ SREL+SL ILLVG +W+ + S + Sbjct: 1 MNHNTNEEKTEHPTEHRIRKFRKKGKTRYSRELSSLFILLVGFINLWWYRDLIVLNFSKI 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 +S F+ + + N L +I++ ++E + + P + +++V +I P++ G+ + +S Sbjct: 61 MSDSFLFESNDFLNNNNNLLKILMSLKEILFSFFPFLISLLIVIIIPPILFSGISLNFRS 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L FSKLNP G KR+FS Q E K ILK +V ++ ++L + +++ L+ + + Sbjct: 121 LTLNFSKLNPFHGFKRLFSFQIIVEFFKIILKLFIVSIISFWYLQFSFSEILFLVNANYV 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 +++ + +++ C LV+LG+ P+V FD+ +Q F++ KKL+M+RQ++RDE K+ EG+P++ Sbjct: 181 SSLSHGYNIIFSCCFLVILGLFPIVFFDIAWQQFNYYKKLKMTRQEMRDELKEKEGNPNI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RIRQ +A RRRM+ + PKADVI+ NP HYSVAL+YDE M+APKV+AKG G A++ Sbjct: 241 KMRIRQAMKAVMRRRMIINTPKADVIITNPIHYSVALKYDEKNMNAPKVIAKGIGEAAIK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I+ + ++N+ + P LAR+LYR++EIGQ IPG LY AVAEVLAWVW++++W+ GG Sbjct: 301 IQNLALKHNISIISVPSLARSLYRYSEIGQYIPGPLYKAVAEVLAWVWKVRKWKKEGGIF 360 Query: 360 PVQPTHLPVPEALDFINEKPTHE 382 P +P ++ VP L F E T++ Sbjct: 361 PEKPINISVPSELTFTGEHETND 383 >UniRef50_A0L3J7 Flagellar biosynthetic protein FlhB n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L3J7_MAGSM Length = 355 Score = 407 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 147/355 (41%), Positives = 213/355 (60%), Gaps = 1/355 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+DE D KTE PT RL +R +GQ+ S+E+ + L++L ++V G L + L Sbjct: 1 MADEDKDSKTEEPTSKRLSDSRNKGQVVSSKEVPTALLMLAALAVFLVQGNELWQALQRK 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + L S P + +IR ++ L P + ++VA+IS ++ G + + + Sbjct: 61 MHFFLSGQISDDITPTGVSLIFNEIIRAVVMDLAPFFALFLVVAIISGLIQHGWLITFEP 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L PKFSK+NPL G+KR+FS ++ E K+I+K ++ + ++ Q++ L + Sbjct: 121 LMPKFSKVNPLQGLKRLFSVRSLVEAFKSIVKIFVISFAVYLAMRNNIDQILGLADTTIT 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 V L + + D +Q F ++K LRMS+Q+I+DE KQ EGDP + Sbjct: 181 EFTTLMFKDSLEILWRVTLAFLLIAVLDFIYQKFDYIKGLRMSKQEIKDEMKQMEGDPLL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ+QR A+ RMM +VPKADVI+ NPTHY+ ALQY +MSAPK+VAKG GL+A R Sbjct: 241 KGRIRQIQRELAQSRMMQEVPKADVIITNPTHYACALQYTPGQMSAPKLVAKGKGLIAAR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 IRE+ ENN+P +E PPLAR LYR E+ Q IP +L+ AVAEVLA+V+ LK R Sbjct: 301 IRELADENNIPRVENPPLARTLYRDVELEQFIPPELFKAVAEVLAYVFSLKNRRS 355 >UniRef50_A6F9S1 Flagellar biosynthetic protein n=1 Tax=Moritella sp. PE36 RepID=A6F9S1_9GAMM Length = 375 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 131/374 (35%), Positives = 219/374 (58%), Gaps = 1/374 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MSD S +KTE PT + + A++EGQI RS+EL + ++L+ S + + S + S + Sbjct: 1 MSDSSTQEKTEEPTQKKRDDAKKEGQIARSKELATAGLILISGSSLTWFAPSFSAFFSEL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + + + DP ++ + I + L+P I + L + +M GGL+F K+ Sbjct: 61 FTIQMQLTREVTRDPQYMVVMLGEAIINMLKVLIPFILVLNLTTFLLGIMPGGLIFVLKN 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 +QPK SK+NP+ G+KRM S T EL+K+ILK L+ L HW ++ + + Sbjct: 121 IQPKISKMNPISGLKRMVSKDTIIELIKSILKISLISFTLYKVLSLHWHELAAMAQMPLL 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + NAM ++ + + ++ + D+ +Q +S KKL+MS+Q+I+DE K +EG P + Sbjct: 181 NVLNNAMYIMSITLSFMGAALLIVAAIDLPYQKWSMNKKLKMSKQEIKDEHKGAEGSPEI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +I+Q+QR +++R+ + VP AD ++ NPTHY+VA++YD + AP +VAKG +ALR Sbjct: 241 KQKIKQIQRQMSQKRIDSAVPTADFVIVNPTHYAVAVKYDAARSQAPFIVAKGVDTMALR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I++I +++ +EAP L RA+Y ++ Q+IP QLY AVA +L + QL +R G++ Sbjct: 301 IKKIAESHDLDIIEAPELTRAIYHSTQVDQEIPAQLYTAVAYILTHIMQLSAYRKGRGKQ 360 Query: 360 PVQPTHLPVPEALD 373 P + +P L Sbjct: 361 PNTLPNFEIPATLK 374 >UniRef50_A1HN21 Flagellar biosynthetic protein FlhB n=2 Tax=Veillonellaceae RepID=A1HN21_9FIRM Length = 376 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 121/348 (34%), Positives = 202/348 (58%), Gaps = 1/348 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +KTE TP R E+AR++GQ+ +S EL S L LL I G + +L+ + Sbjct: 28 NQEKTEEATPKRREEARKKGQVAKSVELGSALCLLAAFFTIKLTGTYIYEQLASYMQFLF 87 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + L + +LP++ ++ V+L+ M G FS + L+P+ Sbjct: 88 SRFTKEDMTIASSYRFFLDLALIFLKIVLPIMLVILAVSLLVNFMQVGFTFSVEPLKPQL 147 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 S++NPL G++R+FS ++ EL+K++ K ++ F+ + L + ++ Sbjct: 148 SRINPLAGMQRLFSKRSLVELVKSLFKVAIISYFIYQFIIEETLNIALLSRLALRDSLAV 207 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 L A + + ++ + D ++Q + H + L+M++Q++++EFKQ+EG+P +K +I+ Sbjct: 208 IAALTFDLAFRIGVVILVLAILDYYYQWWEHNQNLKMTKQEVKEEFKQTEGNPQIKSKIK 267 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + QRA A RRMM +VPKADV+V NPTH+++AL Y+ M+AP V+AKG +A RI+ + Sbjct: 268 ERQRALAMRRMMQEVPKADVVVTNPTHFAIALLYE-KTMTAPMVIAKGQDFMAERIKLVA 326 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 EN V +E LARALY EIG+ +P +LY AVAEVLA+V++LK+ Sbjct: 327 KENGVAIVENKALARALYDTVEIGETVPPELYKAVAEVLAYVYRLKKR 374 >UniRef50_UPI0001BCCDC9 flagellar biosynthesis/type III secretory pathway protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCCDC9 Length = 369 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 131/352 (37%), Positives = 202/352 (57%), Gaps = 2/352 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +KTE PT + AR++GQ+ RS+EL + +LLVG + S+ ++ + Sbjct: 20 GGEKTEEPTAKKRADARKKGQVGRSQELNTAFVLLVGFFSLKLLWDSIYLSIATYTTYVF 79 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + ++ N+I I +I P++ ++++ L GL FS +S++ K Sbjct: 80 SNLNQTVDTENIIR-IFIGIIIVLAKTAFPIMLFIMVIGLAINFFQVGLNFSAESIEFKL 138 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNP+ G R+FS + EL K+ K I++G F+ M + M T++ Sbjct: 139 DKLNPINGFGRIFSKRALVELAKSFFKIIVIGFFLYRFIHEQILAMPQFMFFDLTTSLAL 198 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +++ A +V+ ++ M D +Q + + L+M++Q+++DE KQ+EGDP +KG+IR Sbjct: 199 VAEIIFQMAFIVIGVIMIMAFCDYGYQRWQTTQDLKMTKQEVKDEMKQTEGDPQIKGKIR 258 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q QR A RMM +VPKADVI+ NPTHY+VAL Y++ M AP VVAKG LVA RI+EIG Sbjct: 259 QKQRQMAMARMMKEVPKADVIITNPTHYAVALSYEQG-MVAPTVVAKGQDLVAQRIKEIG 317 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 + VP +E PLAR LY ++G +P +LY AVAEVLA+V++LK R Sbjct: 318 RDARVPIIENKPLARTLYAAVQVGDAVPHELYQAVAEVLAYVYRLKHARRGA 369 >UniRef50_A0Z390 Flagellar biosynthetic protein FlhB n=3 Tax=unclassified Gammaproteobacteria RepID=A0Z390_9GAMM Length = 384 Score = 406 bits (1044), Expect = e-112, Method: Composition-based stats. Identities = 141/384 (36%), Positives = 233/384 (60%), Gaps = 4/384 (1%) Query: 1 MSDES--DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++E ++TE PT RL++ARE+GQ+ RSREL +LL+LL +W G ++ Sbjct: 1 MAEEQTGQERTEEPTAKRLQQAREKGQVARSRELNTLLMLLPCAVALWLTGEFAMDAVTR 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + L + + + + + + ++P ++ V VAL+ P ++GGL+FS K Sbjct: 61 LFTGALTPPSEAMKVTSEVAPFLGATLMSGLEMIVPFLALTVFVALLGPSVMGGLIFSLK 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 S+ P K++P+ G R+FS ++ EL+K++LK LV V L ++M L++ Sbjct: 121 SMSPGLDKIDPIKGFGRIFSRKSLLELVKSLLKFFLVSGVAVLVLLSFEREVMGLISLPV 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + A ++ L + + +I +V DV FQ++ H +KLRM++Q+++DE K+++G+P Sbjct: 181 GEGIAQAGRMIMLTLIFLSASLILVVAIDVPFQLWDHTRKLRMTKQEVKDEMKETDGNPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +KG+IRQ QR A RRM+ADVP ADV++ NPTH+SVAL+YD+ +AP+V+AKGA +A+ Sbjct: 241 MKGKIRQKQREIADRRMLADVPTADVVITNPTHFSVALKYDQEGNTAPRVLAKGADHMAM 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +IR I +++ E PPLARAL+ E G +IPG L+ AVA VLA+V+ L++ + Sbjct: 301 QIRHIARAHDIVIYEEPPLARALFASTEAGDEIPGNLFLAVARVLAYVFHLRKAQAT--D 358 Query: 359 RPVQPTHLPVPEALDFINEKPTHE 382 +P + +PE I K ++ Sbjct: 359 YVPRPESIELPEEYADIMNKELND 382 >UniRef50_B2A365 Flagellar biosynthetic protein FlhB n=3 Tax=Bacteria RepID=B2A365_NATTJ Length = 363 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 119/347 (34%), Positives = 203/347 (58%), Gaps = 1/347 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +KTE PTP ++R++GQ+ +S ELTS L+L+ S ++ R Sbjct: 13 NQEKTETPTPKHRRESRKKGQVAKSTELTSALLLMATFSTLYIVFPYSFDRFMNFAKQFW 72 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 ++I + I +I ++ E + P+I VL+ LIS +M G++ +G L+PK Sbjct: 73 SNINTINYTMDEIHSLLITMMMEGAVFAAPVIIVAVLIGLISNLMQVGILLTGDPLKPKL 132 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 +L+P+ G +++FS + EL K++ K +++G + +H + + Sbjct: 133 ERLDPIKGFQKIFSKRAVVELTKSLFKMVVIGIIAYILFNNHMEHFPYFYDMTVMQIAVE 192 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 L V + ++ + D +Q++ H + L+M++Q ++DE KQ+EGDP V+ +++ Sbjct: 193 VGQLTWALIFRVGMALLFLSILDYVYQVWEHEQNLKMTKQQVKDEHKQTEGDPQVRSKMK 252 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + QR +++RMM++VP+ADV++ NP H +VAL+YDE +AP V+AKG G VA +I+EI Sbjct: 253 EKQREISKKRMMSEVPEADVVITNPVHIAVALKYDEG-DTAPMVLAKGQGHVARKIKEIA 311 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 ++NV +E LAR+LY EIG IP +LY AVAEVLA+V++LK+ Sbjct: 312 EDHNVVVMENRQLARSLYFSVEIGDFIPEELYQAVAEVLAFVYRLKK 358 >UniRef50_C5S862 Flagellar biosynthetic protein FlhB n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S862_CHRVI Length = 384 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 147/370 (39%), Positives = 234/370 (63%), Gaps = 4/370 (1%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 ++ +++EAPT RL ++RE+GQ+ RSREL + +IL+VG + + F G +A R+S ++ Sbjct: 4 NENGQERSEAPTAKRLRESREKGQVARSRELNTFIILIVGGAFLLFLGGGMAARISQLMI 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 G + +I D L++ + L+ A+L L PL ++++AL+ P+++GGL FS ++L Sbjct: 64 DGWTLERGLIFDEGLLVPHLQHLLGRALLILAPLFGLLMVIALMGPILVGGLNFSTQALM 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PKFSK+NP+ G+KR+FS Q EL+K + K LVG V + W ++ L A Sbjct: 124 PKFSKVNPISGLKRVFSVQGLMELVKGLGKFGLVGIVATLAIMSIWGNLLTLGELPVEQA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + + + L+ ++ + DV FQ+++H K+LRM+ Q+I+DEFK++EG P VKG Sbjct: 184 IVQTVHMAAWLFLIAAAALLVVAAIDVPFQVWNHQKQLRMTLQEIKDEFKETEGKPEVKG 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQ+Q ++RRMM++VPKADV++ NPTHY+VA+ Y M AP+++AKG VA IR Sbjct: 244 RIRQLQHEMSQRRMMSEVPKADVVITNPTHYAVAISYVPAIMPAPRLLAKGTDAVAQAIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 + E+ + +EAP +ARA+Y ++ Q+IP L+ AVA +LA+V+Q++R Sbjct: 304 ALAEEHRIVRVEAPRVARAIYFTTDLNQEIPNGLFVAVARILAYVYQIRRE----DPDVE 359 Query: 362 QPTHLPVPEA 371 LPVPE Sbjct: 360 LADDLPVPEE 369 >UniRef50_C9PBY4 Flagellar biosynthesis protein FlhB n=4 Tax=Vibrio RepID=C9PBY4_VIBFU Length = 376 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 135/375 (36%), Positives = 226/375 (60%), Gaps = 2/375 (0%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MSD+ S DKTE +P +++KARE+GQIPR++E T+ +I L + ++ + ++G Sbjct: 1 MSDQASSQDKTEKASPQKVKKAREQGQIPRAKEFTTAVIFLAVAIYFYAQLPAIWQSIAG 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + L + +++P ++ Q+ + + L+P+ +++V L S ++LGG +F Sbjct: 61 VFRYNLSLTRADLDNPMQMVEQLGHSLGMVIELLMPMFLVIIVVTLASSMILGGWLFRPA 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +L PK +KLNP+ GI R+FS ++ EL+K+ LK ++ +V +L +H M+ + Sbjct: 121 NLLPKLNKLNPISGISRIFSTRSLVELVKSTLKVSVIFAVLYGYLDNHLQPMLGMQGLPL 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 M+++ LL+ ++ D+ +Q + HLK+L+M++Q++++E+K +EG P Sbjct: 181 NQGFILIMNILFEGLLLMGFALLVFGVIDIPYQRWEHLKELKMTKQELKEEYKNNEGRPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K RIRQ+Q+ ARRR+ VPKADV++ NPTHY+VAL+YD AP VVAKG AL Sbjct: 241 IKQRIRQIQQQFARRRIDKMVPKADVVIVNPTHYAVALKYDPALSDAPFVVAKGVDETAL 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 I+ + +N V + +PPL R++Y I Q +P QLY AVA +L +V QLK +R G+ Sbjct: 301 HIQRLARDNQVEIIHSPPLTRSIYYTTAIEQAVPSQLYVAVAHILTYVLQLKAFRSGSGE 360 Query: 359 RPVQPTHLPVPEALD 373 +P+ H +P L Sbjct: 361 QPLPLPHFSIPNHLQ 375 >UniRef50_C9LSQ5 Flagellar biosynthetic protein FlhB n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LSQ5_9FIRM Length = 366 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 128/351 (36%), Positives = 205/351 (58%), Gaps = 2/351 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +KTE PT R AR++GQ+ RS+EL+ +LL G V+ G ++ + + + Sbjct: 18 AGEKTEEPTAKRRNDARQKGQVARSQELSGAFVLLAGFFVMRALGSTILTEIETY-TVHI 76 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + + + D ++ II + P++ ++++ L G +F+ + L K Sbjct: 77 YANMNQTVDAETVMRLIIDGMIVLAKTAFPVMIAILVMGLAINFYQVGFMFTTEPLSFKL 136 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNP+ G R+FS ++ ELLK++LK ++G+ +L M + ++M Sbjct: 137 DKLNPITGFGRIFSKRSIVELLKSLLKIAIIGAFLYVYLSGEIMHMPEFIYLDLKSSMAR 196 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 D++ +++ M D +Q + + L+MS+QDI++EFKQ+EGDP +KG+IR Sbjct: 197 MGDIIFSLVFQIIIVYFVMAAADFAYQKWQTTQDLKMSKQDIKEEFKQTEGDPQIKGKIR 256 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q Q+ A RMM +VP+ADVIV NPTHY+VAL+Y M AP+VVAKG LVA +I++I Sbjct: 257 QKQQQMAMNRMMKEVPEADVIVTNPTHYAVALKYKAG-MKAPEVVAKGQDLVAQKIKDIA 315 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 E+ V +E PLARALY ++G +P +LY AVAEVLA+V++LK+ + A Sbjct: 316 REHRVTIVENKPLARALYAAVDVGGIVPPELYQAVAEVLAYVYRLKKKKFA 366 >UniRef50_A4J750 Flagellar biosynthetic protein FlhB n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J750_DESRM Length = 354 Score = 402 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 116/352 (32%), Positives = 199/352 (56%), Gaps = 1/352 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M + S +KTE TP RL++AR +GQ+P+S +L ++LL+ +L + Sbjct: 1 MPEGSQEKTEQATPRRLQEARRKGQVPKSADLNGAILLLITGLFALLYKDNLITHMQTYF 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + + ++ +I + + PL +++VAL + G +F+ +++ Sbjct: 61 FTYFNNFVKQQQQDSYLVQILIDFMINVFVVFTPLFILLMVVALGVNLAQVGFLFAPEAI 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PK KLNP+ G+K MFS + EL+K++LK +VG V + ++ + P T Sbjct: 121 KPKLDKLNPINGLKNMFSGRAMFELVKSLLKITIVGWVVYAAVRGEMANLLAIFHSPPRT 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + L + + + D+ +Q ++ K++RMS+Q++++E+KQ+EGDP +K Sbjct: 181 LLNQVLTIALKVILWGAVVYLGIALLDLLYQRYAFQKQMRMSKQEVKEEYKQTEGDPQIK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G +R+ QR +VP+A V+V NPTHY+VAL+Y++ M AP VVAKG +A +I Sbjct: 241 GWLRRRQRQLLANLARKEVPQATVVVTNPTHYAVALKYEQ-PMDAPVVVAKGTDHMARQI 299 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 REI +N VP +E +AR LY + EIG IP +++ AVAE+LA V+++K Sbjct: 300 REIARKNEVPVIENVEVARFLYANVEIGHAIPMEMFQAVAEILAMVYRMKNK 351 >UniRef50_B1LC25 Flagellar biosynthetic protein FlhB n=6 Tax=Thermotogaceae RepID=B1LC25_THESQ Length = 374 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 128/348 (36%), Positives = 203/348 (58%), Gaps = 5/348 (1%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 ++TE TP + + REEG+ P SREL + LV + G R++ + A L F Sbjct: 32 ERTERATPRKRRRVREEGRAPVSRELNMAVTFLVFALALKIFGYQGVERITEDVQAFLSF 91 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + + +L + ++ +L + + ++ ++ + +F+ K+L+P ++ Sbjct: 92 EET-----EDLLVNAVNTFKDVLLIIGAFVVFSMVAGVMIGALQTRFLFAPKALKPDLNR 146 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 +NP+ G KR+FS ++ ELLK++LK +VG V L + W +M+ L + A N Sbjct: 147 INPIEGFKRLFSLRSLVELLKSVLKVAIVGIVVYQVLKNRWDEMILLTEMNVNDAFANFW 206 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 D+ L + ++ + FD F+Q + K +RM++Q+++DE K+ EG+P +K R RQM Sbjct: 207 DIASEITLKSGMVLLALAVFDYFYQRWEFEKSIRMTKQEMKDELKEVEGNPEIKRRQRQM 266 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 RRRMM +VPKADV++ NPTH++VAL+YD + M+AP VVAKG +AL+I EI E Sbjct: 267 MYDILRRRMMEEVPKADVVITNPTHFAVALKYDPDTMNAPVVVAKGVDHLALKIIEIAKE 326 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 N+VP L P LARALY EIG++IP + Y VAEVL +V+ K R+ Sbjct: 327 NDVPVLRNPSLARALYYKTEIGEEIPVEFYRIVAEVLVYVYTKKGVRI 374 >UniRef50_C4G684 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G684_ABIDE Length = 387 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 141/354 (39%), Positives = 210/354 (59%), Gaps = 3/354 (0%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 E DKTE TP +LE AR+EG++ RS +L + L+LL+ V+ G +A+ Sbjct: 31 EGGDKTEKATPKKLEDARKEGRVARSSDLINGLMLLLMFFVLRIFGNFMAKGFLESFVKY 90 Query: 64 LHFDHSI---INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + I I D + ++ + ++A LP++ G LVA V+ G + K L Sbjct: 91 YNKTADISMEIFDVKQAVNLGNEIVFDIVIACLPVLIGSFLVAFAGNVVQIGWKVTTKPL 150 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PK +LNP+ G+KRMFS + EL+K+ILK + + V + W ++ L + Sbjct: 151 KPKLDRLNPIGGLKRMFSQEKVVELIKSILKVLAIAIVAYNEVKDRWLFILNLYDFEFMQ 210 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ N D+V + + + + + D +Q + HL LRMS+Q+++DE KQSEGDP VK Sbjct: 211 AIVNIFDIVLDVGVKISVLFVIIGIADFGYQKWKHLHDLRMSKQEVKDEMKQSEGDPQVK 270 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GRIRQ R ARRRMM ++PKADV++ NPTH++VA++YD+ K AP V+AKGA VA I Sbjct: 271 GRIRQKMREGARRRMMQELPKADVVITNPTHFAVAIKYDKEKAEAPYVLAKGADYVAATI 330 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 +E E+ + +E PLAR LY + EIG+QIP +LY VAEVLA+V+ +K + Sbjct: 331 KEAAKEHKIEIVENKPLARMLYYNVEIGEQIPPELYQMVAEVLAYVYSVKNKEI 384 >UniRef50_C1SNG6 Flagellar biosynthetic protein FlhB n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNG6_9BACT Length = 352 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 128/351 (36%), Positives = 203/351 (57%), Gaps = 2/351 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+DE +KTE PT +L A+ EG + +SREL + + LL+ ++ G L L+ ++ Sbjct: 1 MADE-QEKTEDPTGKKLTDAKNEGNVAKSRELPAAVTLLLVTFFFYYYGPYLMHGLARLI 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + IN + ++ I E+ L P ++ V++V + S V+ G +F+ K+L Sbjct: 60 REIFMMTNYEINTQSAHK-IMLFSIIESAKLLAPFMALVLVVGVASNVLQTGFMFTPKAL 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 K +++P+ G R FS ++ EL+K++ K +V V + H ++ + Sbjct: 119 SAKLERIDPIKGFGRFFSKKSLVELMKSLFKVFVVTYVAYLIVKKHIVTIISMADMDFYD 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 +V V L + M D FQ + + L+MS+ ++++E KQ+EGDPHVK Sbjct: 179 IFSVFGKIVYEIMWKVSLLALFMALADFIFQKYQFKQDLKMSKHEVKEERKQAEGDPHVK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GRIR +QR AR+RMM DVPK+DV+V NPTH++VAL+Y + AP V+AKG L+ALRI Sbjct: 239 GRIRSIQREMARKRMMDDVPKSDVVVTNPTHFAVALKYSPGEDRAPVVMAKGQRLMALRI 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +EI ++ + E PP+AR+L++ +IG +IP LY AVAE+LA V + KR Sbjct: 299 KEIAKQSGILVHEDPPIARSLFKTVDIGDEIPENLYKAVAEILALVDKFKR 349 >UniRef50_Q3V7G4 Flagellar biosynthetic protein flhB n=2 Tax=Proteobacteria RepID=Q3V7G4_AZOSE Length = 388 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 152/321 (47%), Positives = 222/321 (69%), Gaps = 1/321 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD +KTE +P RLE+AREEGQ+P+SREL++ L+L+ G S +W G + R+ GM Sbjct: 1 MAEDSDLEKTEQASPRRLEQAREEGQVPQSRELSTFLVLITGASGLWLMGGWIGERMLGM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L G F+ ++ DP L+L L +A+L +LPL +++ A+ +P++LGG VFS K+ Sbjct: 61 LRHGFRFERALAFDPQLMLQDFGDLFTQALLTMLPLFGVLMVAAVGAPILLGGFVFSPKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L + +++PL GI RMF E+LK++LK +VG + F +W + L +E+ Sbjct: 121 LGLELDRMDPLKGIGRMFLLHGLVEMLKSLLKAAVVGGIGVFAMWRERDHIFALTSEAVE 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ + + V ALL+++G+ + DV FQ++ + K+LRM++++++ E K+ EGDPHV Sbjct: 181 RAVPDFLQAVLFSALLIIMGLALLALIDVPFQLWQYHKRLRMTKEEVKREGKEQEGDPHV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR MQR ARRRMMA+VPKADV+V NPTH+SVAL+YD KM AP VVAKG G +AL+ Sbjct: 241 KGRIRSMQREMARRRMMAEVPKADVVVTNPTHFSVALKYDAQKMGAPVVVAKGRGEIALK 300 Query: 300 IREIGAENNVPTLEAPPLARA 320 IRE+ E+ VP LEAPPLARA Sbjct: 301 IRELAKEHKVPLLEAPPLARA 321 >UniRef50_Q3ADC9 Flagellar biosynthetic protein FlhB n=2 Tax=Bacteria RepID=Q3ADC9_CARHZ Length = 353 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 121/354 (34%), Positives = 210/354 (59%), Gaps = 2/354 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+DE D +TEAPTP RL +AR GQ+ +S+EL ++ L+ ++ G ++ + Sbjct: 1 MADEQRDQRTEAPTPRRLAEARRRGQVFKSQELNFAVMFLIFFLLLLVLGGYFYQQFY-L 59 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 LS + + I P+ + G ++ + +LP + +L + ++ G +F+ + Sbjct: 60 LSRNVFRNMFIELTPSAVRGLLLYYFGWSFKIVLPFLLLGMLAGIALNLVQVGFIFTTEP 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+P + ++NPL G R+FS + ELLK LK + V + + P + + + ++P Sbjct: 120 LKPSWERINPLSGFSRIFSRRNWVELLKNFLKFGFLALVIYLRIKSNLPLIFQKIGQAPA 179 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 L+ AL +L + D ++Q + + L+M++Q++++E++Q+EGDP + Sbjct: 180 EYFNGYFSLIKKIALDTLLVLFLFGAVDYWYQRREYYQSLKMTKQELKEEYRQTEGDPLI 239 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K R+R+ QR A ++ +VP+A V+V NP H +VAL+Y+ KM+APKVVAKGAG +A + Sbjct: 240 KARLRERQRQIALNQIAREVPQATVVVTNPVHIAVALKYERGKMAAPKVVAKGAGFLAEK 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 I+EI +NV +E +AR LY++ E+G++IP +LY AVAE++AWV++ KR R Sbjct: 300 IKEIARAHNVEIVENVEVARFLYKNCEVGEEIPEELYNAVAEIIAWVYRKKRKR 353 >UniRef50_Q2W9Q2 Flagellar biosynthesis pathway n=3 Tax=Magnetospirillum RepID=Q2W9Q2_MAGSA Length = 355 Score = 399 bits (1026), Expect = e-110, Method: Composition-based stats. Identities = 130/350 (37%), Positives = 208/350 (59%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+++SDDKTE PT +L +ARE+G IP S+E+ L+ + V+ +AR + +L Sbjct: 1 MAEDSDDKTEEPTDRKLSQAREQGNIPTSQEVKIWASLVGALVVVTLFAPYMARDIGRLL 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + H+ + + + + + L+ + +V++A+ S + GL+F L Sbjct: 61 LPFVEHPHAFPMGREDVGQLLSGITVDMIKLLIMPMMMLVVLAIASAMGQSGLMFLPDKL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 F KL+P G++R+FS + E +K++ K +G V L H + L A + Sbjct: 121 TLDFGKLSPGKGLQRIFSGRNLVEFVKSLFKVSAIGFVIFLILKSHMSEYAGLAALDLMA 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + V ++VVL V + D F+Q ++ ++++M++Q+I+DE KQ+EGDP +K Sbjct: 181 VLDYLRHQVITMIIVVVLMVFVLAAADWFYQRWAFTQQMKMTKQEIKDEHKQTEGDPMIK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GR+R ++ AR+RMMA VP+A V+V NPTHY+VALQYD++ M AP +VAKG L+A RI Sbjct: 241 GRLRALRMQRARQRMMAAVPRASVVVTNPTHYAVALQYDQDSMGAPVLVAKGVDLIAKRI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 R++ EN VP +E PPLARALY E+ Q+IP + Y VAE++ +V +LK Sbjct: 301 RDLATENEVPIVENPPLARALYATVELDQEIPPEHYKTVAEIIGYVMKLK 350 >UniRef50_A7K1M6 Flagellar biosynthesis protein FlhB n=13 Tax=Vibrionaceae RepID=A7K1M6_VIBSE Length = 375 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 139/374 (37%), Positives = 221/374 (59%), Gaps = 1/374 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MSD+S DKTE +P +++KAR+EGQIPR++E T+ +I L + S+ +SG+ Sbjct: 1 MSDQSSQDKTEKASPQKVKKARQEGQIPRAKEFTTAVIFLAVALYFYSQLNSIWESMSGI 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + + + +P ++ Q+ + + LLPL + +++V S ++LGG +F + Sbjct: 61 FRYNMMLTRADLENPKQLVEQLGQSLAVIIDMLLPLFTVIIIVTCGSSLVLGGWMFRPAN 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + PK SK+NPL GIKR+FS ++ ELLK+ K ++ + +L +H ++ + Sbjct: 121 VMPKLSKINPLSGIKRIFSTRSVVELLKSTFKVAVIFGILYGYLDNHLQPLLGMQNLPLS 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 M ++ LL+ ++ D+ +Q + HLK+LRM++Q++++EFK +EG P V Sbjct: 181 QGFSLVMSILFEGLLLMGFALLLFGVVDIPYQRWEHLKELRMTKQELKEEFKNNEGRPEV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RIRQ+Q+ ARR++ VP ADVI+ NPTHY+VAL+Y+ + AP VVAKG A+ Sbjct: 241 KQRIRQIQQQFARRKIDKMVPTADVIITNPTHYAVALKYEPSLSDAPFVVAKGVDETAMH 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I+ I EN V + +PPL R++Y I Q IP QLY AVA +L +V QLK +R G+ Sbjct: 301 IQRIARENKVEIINSPPLTRSIYHTTAIEQAIPSQLYIAVAHILTYVLQLKAFRKGEGKE 360 Query: 360 PVQPTHLPVPEALD 373 P H +P+ L Sbjct: 361 PTPLPHFSIPKHLQ 374 >UniRef50_A1VY54 Flagellar biosynthetic protein FlhB n=27 Tax=Epsilonproteobacteria RepID=A1VY54_CAMJJ Length = 368 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 134/368 (36%), Positives = 217/368 (58%), Gaps = 1/368 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ E +KTE PT ++E AR+EG +P+S++ +++ L++GV++ F + R+ + Sbjct: 1 MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTITLFMMSFMGERIVNLY 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 F + D +I +I I E ++ L P++ +++ ++ +M G +F+ K + Sbjct: 61 RYYQSFIG-VEFDLRIIQAIMIKSIFEVLIILAPIVLSIMIAGVLGNIMQFGFIFTTKPI 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 P K+NPL G+K +FS + E +K ILK +V ++ L ++ R+ + +T Sbjct: 120 MPNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFIVLLKFMQELPRVELYTMVT 179 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + D + A +V++ + + DVF F + K LRMS+Q+I+DE+KQ EGDP VK Sbjct: 180 QLAWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGLRMSKQEIKDEYKQMEGDPQVK 239 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GRIR++Q AARRRM+ DV ADV++ NPTHY+VA++YD +K AP+VVAKG +ALRI Sbjct: 240 GRIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIRYDTSKEQAPRVVAKGVDFLALRI 299 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 +++ ENNV E PPLAR LY+ ++ IP +++ AVAEVL +V+ GQ Sbjct: 300 KQVAYENNVVVYENPPLARELYKACDVNDLIPREMFKAVAEVLGFVYNTNNKSRLAGQVK 359 Query: 361 VQPTHLPV 368 + V Sbjct: 360 KETKTFKV 367 >UniRef50_C4ZAM8 Flagellar biosynthesis/type III secretory pathway protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZAM8_EUBR3 Length = 382 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 118/352 (33%), Positives = 199/352 (56%), Gaps = 8/352 (2%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA- 62 E +KTE T +L+ AREEG++ +S+ELT+ L+V V+ + L G+ S Sbjct: 29 EGGEKTEPATEKKLKDAREEGKVAKSKELTAAFDLIVLFLVLKIFISFVGGNLIGLFSTV 88 Query: 63 ------GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFS 116 L I+ + + + +I + +L +LP + V++ ++ ++ G S Sbjct: 89 YKKMPDFLKESQEQISSVS-VTHYLNNVILQFLLTVLPFFAFGVVITILVSIIQVGFKIS 147 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 K + PK SK NP+ G KR+ S + ELLK++LK ++ V + H + L Sbjct: 148 TKPMAPKLSKFNPINGFKRILSKDSIFELLKSVLKVGIIMYVAYSSVKSHQNDIFILYEL 207 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 A+ D++ L + + + + D + ++M++Q+++DEFK +EGD Sbjct: 208 PLKQAIVLIGDIIINTGLKISIVYMIVGIADFAYNKHKFNNDMKMTKQEVKDEFKNTEGD 267 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P +KG+ R+ + A++RRMM DVPKADV++ NPTH++VA++YD K AP VVAKG V Sbjct: 268 PAIKGQQRKRMQEASQRRMMQDVPKADVVITNPTHFAVAVKYDAQKNDAPVVVAKGQDYV 327 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 A +I+EI +NN+ +E PLAR L+ + ++G +IP +LY +VAE+LA +++ Sbjct: 328 AQKIKEIARDNNIHIVENKPLARMLFHNVDLGAEIPPELYRSVAEILAMIYK 379 >UniRef50_Q0ANB5 Flagellar biosynthetic protein FlhB n=3 Tax=Hyphomonadaceae RepID=Q0ANB5_MARMM Length = 363 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 123/357 (34%), Positives = 199/357 (55%), Gaps = 2/357 (0%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ + KTE PT RL+ AR++G + +S+E+ +L G++++ F ++R L+G Sbjct: 1 MAEGEDDSQKTEEPTQRRLDDARKKGDVAKSQEIPGWFVLAAGLALLSFIFPMMSRALAG 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 L H +P ++G + + + + + I + + + G++F+ + Sbjct: 61 NLEVFFEQPHDFAINPGAMMGLMQAVAWQVVAIVGLPIGLLAVAGFAGHYVQQGMLFTTE 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +QPK SKLNP+ G KR F Q A LK + K LV ++ + L A Sbjct: 121 KIQPKLSKLNPIEGFKRNFGPQGLANFLKGVGKMALVAVAAFLVIYPKREILAGLPALDI 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + + L + + G D FQ S +K+ RMSR++I+DE KQSEGDP Sbjct: 181 GSLLSLVRQGAIELLLAALTVYAVIAGLDYIFQRQSFMKRNRMSRREIKDEMKQSEGDPL 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 V+ ++RQ+++ ++RRMM VP A V+V NPTHY++AL Y + + AP VAKG VAL Sbjct: 241 VRAKLRQLRQERSQRRMMTKVPDATVVVTNPTHYAIALHYVQGETPAPVCVAKGVDEVAL 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 RIRE+ E++VP +E PPLARAL+ A++ ++IP + + AVA+V+ +V L + R A Sbjct: 301 RIRELAEEHSVPIVEDPPLARALHATADLDEEIPTEHFQAVAKVVGYVLSLSQGRRA 357 >UniRef50_A5D0H9 Flagellar biosynthesis pathway, component FlhB n=2 Tax=Clostridia RepID=A5D0H9_PELTS Length = 357 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 120/357 (33%), Positives = 208/357 (58%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ + ++TE TP R+++AR +GQ+ RS +LT L L V++++ L L Sbjct: 1 MAGGTQERTEQATPRRIQEARRKGQVARSTDLTGALCLAAMVALLYAVKDEFFLDLQRYL 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 I + + + + + P I+ V+ A++S ++ G +FS ++L Sbjct: 61 GWYFSQVAGFIASEEVPGAVLYDTVLFSAKLMAPFIAVPVVTAVVSNLVQVGFLFSTEAL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK S LNP G++R+FS+++ EL+K++ K ++G +T + + + ++ + P Sbjct: 121 NPKLSVLNPATGLQRIFSSRSLVELVKSVFKFTVIGIITYYLIKANLADLLLVFNRPPGG 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + A + + + D +Q + + K L MSRQ++++EF+Q+EGDP +K Sbjct: 181 IYREVAGFILKVAGWAAVAYLILSLLDYIYQRYEYKKSLMMSRQELKEEFRQTEGDPLIK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R R+M+RA + R++++VPKA V+V NPT +VAL+Y++ +M APKVVAKGAG +A RI Sbjct: 241 SRQREMRRAISLNRIISEVPKATVVVTNPTSLAVALRYEQGQMPAPKVVAKGAGRIAGRI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 +EI E++VP +E +AR +Y + E+ Q IP ++Y AVAE+LA V++LK + G Sbjct: 301 KEIAREHDVPIVENKEIARFIYYNVELDQVIPFEIYQAVAEILALVYRLKARKNYRG 357 >UniRef50_B0TNN8 Flagellar biosynthetic protein FlhB n=7 Tax=Shewanella RepID=B0TNN8_SHEHH Length = 377 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 135/377 (35%), Positives = 224/377 (59%), Gaps = 2/377 (0%) Query: 1 MS--DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS D KTE TP +L+KARE+GQ+PRS++L S +++ ++ +A +++ Sbjct: 1 MSNKDSGQSKTEKATPQKLKKAREQGQVPRSKDLASSALIIGCSLLLTTTADWIAAKVAA 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 M + F + +++P ++ + + E + L PL V L+A+++ M GG +F+ Sbjct: 61 MTRINMSFTKAQLDEPGMMARHLAYSLLEVLNILGPLFLMVALIAMVAGAMPGGPIFNFN 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + K+S+++P+ G+ RM S ++ EL+K+ILK +L+ + FL ++ +M + Sbjct: 121 NANFKYSRIDPIAGLGRMASVKSLVELVKSILKIVLLIGIMLLFLQKNFQALMAVSQLPI 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ ++++ L + LG++ + DV +Q + H K+LRMS Q+++DE+KQ +G P Sbjct: 181 DEAVTRGIEMLSLAMFYMGLGLLVITFIDVPYQYWHHHKELRMSLQEVKDEYKQQDGKPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK +IRQMQ+ +R R VPKADV++ NP+HY+VAL+YD NK AP V+AKG +AL Sbjct: 241 VKAKIRQMQQRISRSRADVSVPKADVLLVNPSHYAVALKYDMNKADAPYVLAKGTDELAL 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +R+I N+V LE PPL RA+Y ++ QQIP L+ A+A VL +V QL+ R Sbjct: 301 YMRDIAKRNDVEVLELPPLTRAIYYSTQVEQQIPSGLFIAIAHVLTYVMQLRAARQGQQA 360 Query: 359 RPVQPTHLPVPEALDFI 375 +P H +P+ L Sbjct: 361 KPEPLPHFYIPKNLQHD 377 >UniRef50_A2SKE1 Flagellar biosynthesis protein n=2 Tax=Burkholderiales Genera incertae sedis RepID=A2SKE1_METPP Length = 387 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 145/382 (37%), Positives = 233/382 (60%), Gaps = 1/382 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D+ D+ + +L+KARE+GQ+PRSR+L + G++++ + ++ + Sbjct: 1 MADQGAQDRNLPASERKLKKAREDGQVPRSRDLGHFAAVAAGIALLAAMAPTATGWMTRL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L +GL FD +N + ++ L + A+LP+ + +VL AL S + +GG F+ K+ Sbjct: 61 LQSGLRFDAGTLNGTASMSERLAELGVQFAWAMLPIGAVMVLAALASSLTVGGWNFTLKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++PKFSKLNPL G+ RM SA + +++ + +++G V F+L + Q + Sbjct: 121 IEPKFSKLNPLTGLPRMLSADRLVDTVRSCVLALVIGLVGAFYLSQNVFQFTSTLTLPLP 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 TA+ A + V + ++L + DV Q F H K+L+MS Q+++ E K++EG+ V Sbjct: 181 TALAQAGNDVLYGLMFLLLALAVFALIDVPLQRFQHAKRLKMSHQEMKQEHKENEGNVEV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +++ R A RRM+A VPKAD++V NPTHY+VAL+Y+E + AP+VVAKGA L+A+R Sbjct: 241 KAKVKARMREMANRRMLAAVPKADLVVMNPTHYAVALKYEEGRGGAPRVVAKGADLMAMR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IR++ ++ VP L+AP LARALY HAE+ ++IP LY AVA+VLA+V+QL+ Sbjct: 301 IRDLAKDSKVPVLQAPVLARALYAHAELDREIPIALYTAVAQVLAYVYQLRAALAGKAPL 360 Query: 360 PVQPTHLPVPEALDFINEKPTH 381 P + LPVP LD N+ + Sbjct: 361 PGELPELPVPAELDPHNKPSSD 382 >UniRef50_D1B6A6 Flagellar biosynthetic protein FlhB n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6A6_THEAS Length = 366 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 138/357 (38%), Positives = 215/357 (60%), Gaps = 9/357 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +++KTE TP + KAREEGQ+ +S++LT+ +++ G+ + G RRL + + + Sbjct: 14 AEEKTEPATPRKRRKAREEGQVTKSQDLTAAVVIASGLLGVLVFGGFFFRRLQLLFAQVM 73 Query: 65 HFDHSIINDPNLILGQIILL-----IREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + + DP++ + +LL + +L PL L AL GL+ + K Sbjct: 74 GY----LKDPSMGGEEWLLLPFSRALGSYLLIWFPLGLACALAALGLMAYQVGLMITPKP 129 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P +++NP+ G+K+MFS ++ E+LK +LK +++ + L ++ + + Sbjct: 130 LVPNLNRMNPVSGMKKMFSGRSFVEMLKGVLKALILLLMLYGALRKDLLTLLGAIGQPFG 189 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 +G M V + + + L ++ + FD +Q + + +RMS+Q+I++E+KQ EGDP V Sbjct: 190 EGLGLVMWRVWVLCMKMTLMLMVLGLFDYAYQRWEFERSIRMSKQEIKEEYKQMEGDPLV 249 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RIRQ QR ARRRMM+DVPKADV++ NPTH +VAL YD AP V+AKG GL+A R Sbjct: 250 KRRIRQRQRELARRRMMSDVPKADVVITNPTHVAVALSYDRKVAEAPVVLAKGKGLIAQR 309 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 IREI EN VP ++ PPLARA+Y E+G++IP LY AVAEVLA+V++L+ G Sbjct: 310 IREIARENRVPVVQNPPLARAIYAQVEVGEEIPESLYKAVAEVLAFVYRLRGGARRG 366 >UniRef50_B8CVM2 Flagellar biosynthetic protein FlhB n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CVM2_SHEPW Length = 393 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 129/377 (34%), Positives = 220/377 (58%), Gaps = 2/377 (0%) Query: 1 MS--DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS D KTE TP +L+KA+ EGQ+PRS++L S +++ ++ +A +++ Sbjct: 17 MSNKDSGQSKTEQATPQKLKKAKSEGQVPRSKDLASSALIIGCSLMLTTSADWIAAKVAK 76 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 M + F + +++P +++ + + E + L PL V L+A+++ M GG +F+ K Sbjct: 77 MTRTNMSFTKAQLDEPGMMMRHLGQSLLEVLNILGPLFLMVALIAMVAGAMPGGPIFNFK 136 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + K+S+++P+ GI RM S ++ EL+K+ILK +L+ + FL + ++ Sbjct: 137 NAAFKYSRIDPIAGIGRMASVKSLVELVKSILKIVLLMGIMWLFLEKNLQTLLSFNQLPV 196 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ ++++ L + LG++ + DV +Q + H +L+MS Q+++DE KQ +G P Sbjct: 197 DEAVSKGIEMLSLGMFFLGLGLLLITFIDVPYQYWHHHNELKMSLQEVKDEHKQQDGKPE 256 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K +IRQMQ+ +R R VPKADV++ NPTHY+VAL+YD +K AP V+ KG +AL Sbjct: 257 IKAKIRQMQQRISRSRADISVPKADVLLVNPTHYAVALKYDIDKADAPYVLTKGTDELAL 316 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +RE+ ++V +E PPL RA+Y ++ QQIP L+ A+A VL +V Q+K R Sbjct: 317 HMREVAKRHDVEVIELPPLTRAIYYSTKVDQQIPAALFIAIAHVLTYVLQIKAARQGKQA 376 Query: 359 RPVQPTHLPVPEALDFI 375 +P H +P+ L Sbjct: 377 QPEPLPHFFIPKNLRHD 393 >UniRef50_C9XJ38 Flagellar export protein n=7 Tax=Bacteria RepID=C9XJ38_CLODC Length = 604 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 119/348 (34%), Positives = 199/348 (57%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S DKTE TP + + R++G I +S+EL + LL ++ + L L+ L Sbjct: 251 STDKTEEATPKKKGEQRKKGNIAKSKELPVAMTLLAFTLLVPTLFSYVVDTLKSSLNYFL 310 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 D + + + I +I + + LP+ +++ +++ + G++F+G++L+P Sbjct: 311 SLDFYMNINYSSIEKLVIAGLMDFFKIFLPIAIPFLVLGIVANLFQVGILFTGETLKPNL 370 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 SKLNP+ G K MFS ++ + L+K ++ + F ++ +++L T M Sbjct: 371 SKLNPVSGFKNMFSMRSLSTLIKDTAIISILAYIGYTFFQDNYLDILKLGNIYLPTLMYT 430 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 DLV + + +I + D +Q +SH K+LRM++Q+++DE+K SEGDP +K +I+ Sbjct: 431 VKDLVYSILSKICVAMIVIAVADYVYQRYSHKKQLRMTKQEVKDEYKNSEGDPEIKAKIK 490 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q QR + +R M VP A VIV NPTH S+A++Y++ K AP VVAKGA +A +IREI Sbjct: 491 QKQRQISSQRTMQAVPSATVIVTNPTHLSIAVRYEKGKDQAPVVVAKGADYLAFKIREIA 550 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 N++P +E P+AR LY+ EI Q+IP +Y A AE+L V+++K Sbjct: 551 KGNDIPIIENKPIARLLYKQVEIDQEIPEDMYQAFAEILVAVYKIKNR 598 >UniRef50_UPI0001C3562E flagellar biosynthesis protein FlhB n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3562E Length = 355 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 129/353 (36%), Positives = 197/353 (55%), Gaps = 1/353 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS +D+KTE TP R + R++G + +S ++ ++ LLV + + + R L + Sbjct: 1 MSVAADEKTEKATPKRRQDERKKGNVFQSSDVIAVCSLLVLFNSLNALAPMIYRTLKASM 60 Query: 61 SAGLHFDHSIIN-DPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + S + +++ + A LPL+ V VA+++ L FS Sbjct: 61 ELFFSYAASTEPLTAEDLPDKLLKAMFLFGQAALPLLFIGVAVAVVTTFFQTRLSFSADV 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++ K +++ L G KRMFS ++ ELLKA++K ++ V ++ + RLM + Sbjct: 121 MKFKMDRISLLKGFKRMFSIRSVVELLKAMIKITILAWVIYSYIKGRIHEFARLMDGTVQ 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A D V I + FD +Q + + K LRMS+Q+I+DE+KQ+EGDP + Sbjct: 181 AAFVYVGDTAVSLVNTVGAAFIFLAAFDYLYQWWEYEKNLRMSKQEIKDEYKQTEGDPQI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR+ QR A RMM +VPKADVI+ NPTH++VAL YD N AP V+AKGA +AL+ Sbjct: 241 KGRIREKQRQMASMRMMQNVPKADVIIRNPTHFAVALGYDSNTNRAPVVLAKGADHLALK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 I E+G N V +E PLAR LY E+ +IP + Y VA+VLA+V++LK+ Sbjct: 301 IVEVGEANGVYIMEDKPLARGLYASVEVDMEIPEEFYQTVAKVLAFVYKLKKK 353 >UniRef50_B9L5B0 Flagellar biosynthetic protein FlhB n=2 Tax=Thermomicrobia (class) RepID=B9L5B0_THERP Length = 363 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 126/347 (36%), Positives = 195/347 (56%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + ++TE TP R ++AR+ GQ+PRS +LTS L+LL G + + + + L L Sbjct: 2 ASERTERATPRRRQEARKRGQVPRSADLTSALVLLAGAFFLPWYAGAAGQTLWDYLERAF 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 I+ + LP++ V + S ++ G VF+ L+P + Sbjct: 62 SGPLPRDLTGPDIVALAWASGATVLKLALPILGLFAAVGVASTLVQAGFVFAPAVLKPDW 121 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 +++P+ G +R+FS + E KA+LK +V +VT + P+ L P Sbjct: 122 RRIDPIAGFQRLFSRRGLFETGKALLKIAIVLAVTYPLIQRDLPRYADLTGAEPAAIAQA 181 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 + A+ V + + D FQ + ++LRM+R ++++E +Q+EGDP +K RIR Sbjct: 182 IGQSMRDLAVRVGAAYLALAILDYGFQRWDLEQRLRMTRHELKEELRQTEGDPEIKARIR 241 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 ++QR A RRMMA VPKA V+V NPTH +VAL+Y+ M AP VVAKGAG VA RI I Sbjct: 242 RLQRQMAMRRMMAQVPKATVVVTNPTHLAVALRYEPRSMRAPVVVAKGAGAVAERITAIA 301 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 ++ +P L PLA+ALYR E+GQ+IP LY AVA+++A+V++L+R Sbjct: 302 RQHTIPVLRNQPLAQALYRTVEVGQEIPITLYEAVADIIAYVYRLRR 348 >UniRef50_B2SN53 Flagellar biosynthetic protein FlhB n=14 Tax=Xanthomonadaceae RepID=B2SN53_XANOP Length = 376 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 143/363 (39%), Positives = 226/363 (62%), Gaps = 2/363 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S++ ++TE PT RL +ARE+G IP+SREL++ + GV + + + + Sbjct: 4 SEDGGERTELPTEKRLREAREQGNIPQSRELSTAAVFGAGVFALMALARGIGDGATAWME 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 L D ++ +P + G L+ + + +LPLI + L P+++ GL FSGK++ Sbjct: 64 TALSPDPTMRENPMALFGHFGDLLLQLLWVMLPLIGICLAAGLAGPLLMSGLHFSGKAIM 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 P +KLNP G+KRM+ + + AEL+K++L+ + VG F + P + L+++ A Sbjct: 124 PDLTKLNPANGLKRMWGSNSLAELVKSVLRLLFVGLAASFCISKSLPGLRSLVSQPLEQA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 +GN +D ++ + D +Q ++ ++KL+M+R++I+ E K+SEG P VKG Sbjct: 184 VGNGLDFTKSLLFYTAGALVLLAAIDAPYQKWNWMRKLKMTREEIKREMKESEGSPEVKG 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQMQ ++R+MM VPKADV++ NPTHY+VAL+Y+ KM AP VVAKG +A RIR Sbjct: 244 RIRQMQMQMSQRQMMEAVPKADVVLMNPTHYAVALKYEGGKMRAPIVVAKGVDEMAFRIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 E G ++ V + APPLARALYR A++G++IP +LY+ VA+VL++V+QL+ W GG P Sbjct: 304 EAGEQHRVAIVTAPPLARALYREAQVGKEIPVRLYSVVAQVLSYVYQLRGW--NGGPMPE 361 Query: 362 QPT 364 P+ Sbjct: 362 LPS 364 >UniRef50_Q1YV76 Flagellar biosynthetic protein FlhB n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YV76_9GAMM Length = 382 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 127/376 (33%), Positives = 218/376 (57%), Gaps = 4/376 (1%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MSD S+++ E PT RLEK RE+GQ+ RS+EL +++ ++ G + L+ Sbjct: 1 MSDKDSSEEREEEPTAKRLEKGREDGQVARSQELGVAAMMIGVAFFLYLFGSYIIADLTK 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + ++G FD + D +L++ + + + ++P+ V++A+ S ++GG +FS K Sbjct: 61 VFASGFTFDRKAVFDTSLLVPAFGIQAVNSFIVVVPIFVLAVIIAIASAGIMGGYIFSLK 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 SL PK SK+NP+ G+KRMF + +L KA+ K L+ V + ++P + +L Sbjct: 121 SLAPKASKINPMAGLKRMFGMKAVVDLSKALSKFALIALVLYLVVSANFPMLTKLGFMDL 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 AM A ++ +LV L +I D+ +Q+ + K+++M++Q++++E K +EG P Sbjct: 181 EPAMAEAGRIIAFGTVLVTLTLIVAAAIDIPYQLHTFNKQMKMTKQEVKEEMKDTEGRPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK +IR+ QR A MM+ + ADV++ NP H++VAL YD +K AP +VAKGA L+A Sbjct: 241 VKAQIRRKQREIATGMMMSAIADADVVIVNPEHFAVALSYDPSKNGAPIMVAKGADLLAK 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 IRE E +P +P LAR+++ EI Q +P LY AVA+V+A+++ L + G Sbjct: 301 AIRERAKEEGIPLFSSPVLARSIFYTTEINQSVPESLYYAVAQVIAYIFNLNSFER--GA 358 Query: 359 RPVQPTHLPVPEALDF 374 + + + VP+ + + Sbjct: 359 QTAKKPNPKVPDDMRY 374 >UniRef50_Q97H65 FliR/FlhB fusion protein n=1 Tax=Clostridium acetobutylicum RepID=Q97H65_CLOAB Length = 610 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 117/349 (33%), Positives = 189/349 (54%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 DKTE TP R +AR++GQ+ RS+E+ L+ +I GG + L M+ Sbjct: 261 DSDKTEEATPKRKSEARKKGQVARSKEVPLAATLVAITFIISLGGQTFFNGLGVMMQTFF 320 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + II +I A + V++V +++ + G + + + ++P Sbjct: 321 QSYIHSNLTELDLRRIIIFVILNAGKFIFMFGVPVMVVGIVANIAQTGWITTTEPIKPDL 380 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNP+ G KR+FS T LLK ++ ++ V FL ++ + L Sbjct: 381 KKLNPISGFKRIFSMTTIVNLLKDLVVVAVLSVVGYKFLMSNYGDIANLNNLMVQYIPQA 440 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 + V +V L +I + GFD + + + K ++M++ ++++EFKQ+EGDP +KG+ R Sbjct: 441 YLSYVISIFRIVALIMIVIAGFDFVYNRYKYKKDMKMTKHEVKEEFKQAEGDPEIKGKRR 500 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q R R M++ VP A V++ NPTH SVA++Y+ AP VVAKGA ALRI+EI Sbjct: 501 QRMREIVTRTMLSKVPDATVVITNPTHISVAIKYERGVDKAPTVVAKGADRTALRIKEIA 560 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 ENNVP +E PLAR +++ E+ +QIP ++Y VAE+LA V++L + + Sbjct: 561 KENNVPIMENKPLARLIFKKVEVDEQIPAEMYQTVAEILALVYKLNKKQ 609 >UniRef50_C5EFG7 Flagellar export protein n=3 Tax=Clostridiales RepID=C5EFG7_9FIRM Length = 353 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 125/351 (35%), Positives = 196/351 (55%), Gaps = 1/351 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +D+KTE TP R + R++G + +S ++ ++ +LV + + R + + Sbjct: 3 ADEKTEKATPKRRQDERKKGNVFQSNDVAAVCSMLVLFHSLKALAPHMYRNFRDAMYMFM 62 Query: 65 HFDH-SIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 S ++ + + + LPL+ VL A+ + FS L+ K Sbjct: 63 GMAADSDSFHQEAGREMLVKAMLLFLESALPLLFIGVLTAVAVTFFQTRMAFSMDVLKFK 122 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG 183 +++PL G KRMFS ++ EL+KA++K ++G V FL ++ RLM + A+ Sbjct: 123 MERISPLKGFKRMFSIRSVVELIKALIKITILGWVVYVFLKGRMEELSRLMEGTVEGALI 182 Query: 184 NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRI 243 + V V + I + D +Q + + K LRMS+Q+I++E+KQ+EGDP +KG+I Sbjct: 183 FTGNTVISLVDTVGVAFIFLASMDYLYQWWEYEKNLRMSKQEIKEEYKQTEGDPQIKGKI 242 Query: 244 RQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREI 303 R+ QR A RMM +VPKADVIV NPTHY+VAL YD ++ AP V+AKGA +AL+I E+ Sbjct: 243 REKQRQMASMRMMQNVPKADVIVRNPTHYAVALGYDADRNRAPVVLAKGADHLALKIVEV 302 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 G N V LE PLAR LY E+ +IP + Y VA++LA+V++L +L Sbjct: 303 GEANGVYILEDRPLARGLYASVEVDMEIPEEYYQTVAKILAFVYKLNDKKL 353 >UniRef50_A8F4V6 Flagellar biosynthetic protein FlhB n=1 Tax=Thermotoga lettingae TMO RepID=A8F4V6_THELT Length = 376 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 193/344 (56%), Gaps = 2/344 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PTP R KAREEGQ+ S EL + LV V V+ F L L + L F Sbjct: 35 EKTEKPTPRRRRKAREEGQVATSNELNMAVTFLVAVFVMRFIFQRLIMFLEN--GSILFF 92 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + N + G+I ++ + L+ L +++ + + M + S K L+ + Sbjct: 93 SLEENDFLNNLSGRIYQSFKDTIFLLVLLFLSLIISVIFAGAMQTKFLLSFKPLKMDLKR 152 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 +NP+ G KR FS ++ ELLK+ILK ++VG V + +W + ++ Sbjct: 153 INPVEGFKRFFSMRSLFELLKSILKMVIVGFVAYSVIRSNWILFRFYSDMETVDSLKLIF 212 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 +L L + + + D F+Q + K +RM++Q+I++E+++ EG P V+ R R++ Sbjct: 213 NLTYEVMLKCAIALFILAIVDYFYQRWEFEKSIRMTKQEIKEEYREIEGSPEVRRRQREI 272 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 AR RM+ VP+ADV++ NP+H +VA++Y +M AP V+AKGA +A +I +I E Sbjct: 273 MARLARGRMLQQVPEADVVITNPSHIAVAIEYKSEEMEAPVVLAKGADEIAQKIIQIAKE 332 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 NN+P + P +AR LY+ +IG+QIP +Y AVAE+LA+V+ L+ Sbjct: 333 NNIPVVRNPQVARELYKTTDIGEQIPPNMYRAVAEILAYVYSLR 376 >UniRef50_C6MMA1 Flagellar biosynthetic protein FlhB n=1 Tax=Geobacter sp. M18 RepID=C6MMA1_9DELT Length = 352 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 117/352 (33%), Positives = 191/352 (54%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD+ KTE PT ++ A+ +G + RSRE+TS + L+ + ++ + + L G + Sbjct: 1 MSDDKHSKTEKPTSKKISDAKSKGNVARSREMTSAVTLITAMIALYASSGIMLKTLQGTM 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 SI P + +I + L P + ++ L + GG+ S + L Sbjct: 61 KDIFGGLASIEITPGGVHHLMIKEFANLGIMLTPFLLVGIISGLAVEISQGGINLSSEKL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + +LNP+ G+ R+F+ + +++K+ +K +VG + L ++ L+ + + Sbjct: 121 KFDLGRLNPVQGMGRLFNKDSVFQVVKSFIKMGIVGYMAYKILAEEMEGIIFLVDQDLLG 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + L +I + D+ F + L L+M++Q+++DE K +EGDP +K Sbjct: 181 ILQFIGHISFKIVLHTCGVLIILAVLDLAFVKWRFLDNLKMTKQEVKDEHKNTEGDPAIK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G+ RQ ARRRM +P ADV+V NPTHY+VAL+YD KM+AP V+ KG +AL+I Sbjct: 241 GKQRQKAFQMARRRMRQIIPTADVVVTNPTHYAVALKYDRLKMAAPVVLFKGVDQMALQI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 + + ENNV +E LAR LY E G +IP L+AAVAE+LA+V+ LKR Sbjct: 301 KIVARENNVTLVENRFLARELYAQVEEGSEIPEGLFAAVAEILAYVYSLKRR 352 >UniRef50_Q1I766 Flagellar biosynthetic protein FlhB n=22 Tax=Gammaproteobacteria RepID=Q1I766_PSEE4 Length = 380 Score = 389 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 158/374 (42%), Positives = 237/374 (63%), Gaps = 2/374 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S+ DKTE PT R ARE+G+I RS+EL ++ + L G + G +A L ++ Sbjct: 4 SESGQDKTEEPTDKRKRDAREKGEIARSKELNTVAVTLAGAGGLLAFGGQMAETLMTLMR 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 A +I D + ++ + A+ ++ P++ + +++ ++P+ LGG +FSG LQ Sbjct: 64 ANFTLTREVIVDERSMGAFLLASGKMAIWSVQPVMILLFVISFVAPIALGGFLFSGSLLQ 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PKFS++NPL GIKRMFS ELLKAI K +++ V L ++ + E A Sbjct: 124 PKFSRMNPLAGIKRMFSLHALTELLKAIAKFLVILVVALVVLASDRQALLSIANEPLEQA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + +A+ +VG AL + G++ + DV FQ++ KKL+M++Q++RDE+K SEG P VK Sbjct: 184 VIHAVQVVGWSALWMAAGLLLIAAADVPFQLWQAHKKLKMTKQEVRDEYKDSEGKPEVKQ 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMS-APKVVAKGAGLVALRI 300 RIRQ+QR A++RRMMA VP+ADVI+ NPTHY+VALQYD K AP ++AKG +AL++ Sbjct: 244 RIRQLQREASQRRMMAAVPEADVIITNPTHYAVALQYDPEKGGAAPLLLAKGTDFLALKM 303 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 REIG E+ V LE+P LARA+Y E+ ++IP LY AVA+VLA+V+Q++++R G+ P Sbjct: 304 REIGVEHKVQILESPALARAIYYSTELEEEIPAGLYLAVAQVLAYVFQIRQYRAGKGKAP 363 Query: 361 VQP-THLPVPEALD 373 LP+PE L Sbjct: 364 EPLKKDLPIPEDLR 377 >UniRef50_A8TPM3 Flagellar biosynthesis protein B n=1 Tax=alpha proteobacterium BAL199 RepID=A8TPM3_9PROT Length = 358 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 139/352 (39%), Positives = 209/352 (59%), Gaps = 2/352 (0%) Query: 1 MSDESDD--KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MSD DD KTE PT +L AR++GQI +S+E+T+ LL + +A +L Sbjct: 1 MSDSQDDSQKTEEPTGKKLGDARKKGQIAQSKEVTNFASLLALTFAVTILAPYMAIQLYS 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 ++ + D ++ L+ + LAL P + V+++ + + + G++F+ Sbjct: 61 SMAVVIEHAAVARIDAGSTSEILMGLVIDTFLALAPTLGTVMVLGVAATLGQSGILFTTD 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + PK KL+PL G KR+FS ++ E +K I+K +V + + + L+ Sbjct: 121 PIMPKLEKLSPLAGFKRLFSLKSIVEFIKGIIKLAIVAFIAYVLMSPELDRAEELLTMDL 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 I + LV + V+ + + D +Q + H K+LRMSRQDIRDE KQ+EGDP Sbjct: 181 IEVLKEIQTLVIRLMMGVLAFMAVVAIADYIYQRYEHYKQLRMSRQDIRDEHKQAEGDPQ 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K R+RQ++ ARRRMMA VPKADV++ NPTH++VALQYD + M+AP VVAKG+ VA Sbjct: 241 IKARLRQIRADRARRRMMAAVPKADVVITNPTHFAVALQYDTSAMAAPVVVAKGSDAVAF 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 RIRE+ E+ VP +E PPLARAL+ EI +QIP Y AVA+V+++V++LK Sbjct: 301 RIREVAKEHKVPIVENPPLARALFASVEIDEQIPETYYKAVAQVISYVYRLK 352 >UniRef50_Q3A5E5 Flagellar biosynthetic protein FlhB n=3 Tax=Deltaproteobacteria RepID=Q3A5E5_PELCD Length = 351 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 125/352 (35%), Positives = 208/352 (59%), Gaps = 1/352 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D ++TE T R R++GQ+ +S+E+ + ++ + + F R LS ML Sbjct: 1 MADSDQERTEQATGKRRADFRQKGQVAQSKEVHTAALMTGTLLLWTFYAPLFWRTLSDML 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 P + + L ++ L L P++ +++ ++S + G +F+ K L Sbjct: 61 HHLWSLAGDFEVTPVSAVMLLGQLGQKIALLLAPIMLTTLVIGILSSYLQVGWLFTTKPL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 P FSK+NP+PG+ ++ S ++ E++K++LK LVG V + + Q + L+ Sbjct: 121 APDFSKMNPVPGLAKLISKRSFIEVVKSLLKVFLVGVVAYKVILAEFGQALDLVDMDIND 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 ++ + L +I + D F + +K++M++Q+ ++E K+SEGDP +K Sbjct: 181 SVVYLARVAARILLRTCGVMILLALLDFLFVRWEMEQKMKMTKQEQKEEHKESEGDPQIK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIR MQ AARRRMMA+VPKADV++ NPTH SVAL YD ++MSAP++VAKGA VA+RI Sbjct: 241 ARIRSMQMQAARRRMMAEVPKADVVITNPTHLSVALAYDRSRMSAPQIVAKGADAVAMRI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 REI E+ VP +E P+AR L++ ++G+ +P +++ AVAE+LA+V+ LK+ Sbjct: 301 REIAREHKVPLVENKPVARVLFK-VDLGKDVPEEMFQAVAEILAYVYGLKKR 351 >UniRef50_C0C1N4 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1N4_9CLOT Length = 353 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 116/355 (32%), Positives = 200/355 (56%), Gaps = 3/355 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ +S KTE TP + R+EG I +S ++ +++ + + ++ + + Sbjct: 1 MAADS--KTEKATPKKRRDERKEGNIFQSSDVVNVVFVFLSFYILKLIFPGIYETSGNFM 58 Query: 61 SAGLHFDHSIINDPNLILGQI-ILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + SI + +G+ + + A +LP ++ ++ + +F+ K+ Sbjct: 59 KRFISLAGSITDLSGQSVGKYGMEFLSAAARTVLPFACICMVTGIVMHGIQTRFLFTSKN 118 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 +PK ++++PL GIKR+F+ + EL+K +LK I++ ++ L ++R M S Sbjct: 119 FRPKLNRISPLQGIKRIFALKNAIELVKNLLKVIVLVAIIYTLLKQDAVNVIRTMDMSIS 178 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + D++ L V + + D FQ + + +K++MS+Q++++EFKQ+EG+P + Sbjct: 179 ASAAYTFDMIISMILRVSMVFAVIAFLDYLFQWWDYERKIKMSKQEVKEEFKQTEGNPEI 238 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR +Q+ AR RMM VP ADVI+ NPTH++VAL YD K +AP VVAKG +ALR Sbjct: 239 KGRIRDIQKQRARSRMMQAVPNADVIIRNPTHFAVALSYDTEKNNAPVVVAKGVDELALR 298 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 I G EN+V +E PLAR+LY E+ ++IP + Y AVAE+L +V++L + Sbjct: 299 IVRTGEENHVAVIEDRPLARSLYAETELNREIPSEYYGAVAEILVYVYKLNKKMR 353 >UniRef50_A6D5X3 Flagellar biosynthetic protein n=4 Tax=Gammaproteobacteria RepID=A6D5X3_9VIBR Length = 382 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 124/379 (32%), Positives = 203/379 (53%), Gaps = 2/379 (0%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS+ +S DK+E P+ H+L KAR EGQ+PR++E S + L+ V+ + + Sbjct: 1 MSEHQDSGDKSEQPSQHKLSKARREGQVPRAKEFVSSVTLISVVAYYVLNIDMIKQTFIE 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + FD I+ + + + ++ PL+ ++ A+ +LGG + S Sbjct: 61 LFLVSFQFDTQTISHWMTSVELLGTALFSMVMLFFPLLIYQIIAAIFGSTLLGGWILSPS 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L PK K++P+ GIKR+FS Q+ EL K + K L S+ + + + + L++ Sbjct: 121 LLTPKLEKISPIKGIKRIFSTQSVVELFKNVFKVTLFFSLLYWVISSYISVITNLVSAHF 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 T + + ++L V+ FD +Q K+++M++Q+++DE K+ EG P Sbjct: 181 DTVVFTVATITIEYLGYLLLIVLIFGLFDFPYQRHEFTKQMKMTKQEVKDEHKEQEGRPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK RIRQ+Q A+R VPKA+V++ NPT Y+VAL YD + AP VVAKG VA+ Sbjct: 241 VKARIRQIQTQNAKRGANERVPKANVVLTNPTQYAVALIYDLTQAEAPFVVAKGKDEVAV 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 IRE+ A+++V +E+ L RA+Y ++ Q +P QL+ A+A +L +V QLK WR Sbjct: 301 YIRELAAKHSVEVVESAELTRAIYNTTQVDQMVPNQLFVAIAHILTYVNQLKAWRQGQRS 360 Query: 359 RPVQPTHLPVPEALDFINE 377 +P +P+ NE Sbjct: 361 KPNGLPRFDIPKVWSDPNE 379 >UniRef50_A8MHF6 Flagellar biosynthetic protein FlhB n=2 Tax=Alkaliphilus RepID=A8MHF6_ALKOO Length = 362 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 126/352 (35%), Positives = 207/352 (58%), Gaps = 6/352 (1%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGV----SVIWFGGVSLARRLSGML 60 S++KTE TP +++ ARE+G + +S+E+ S LILL + F GVSL + Sbjct: 11 SEEKTEQATPKKIKDAREKGNVLQSKEVNSALILLAIFIIINAFATFIGVSLLNMTRAVY 70 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + L + + IL I L+ +A+ P+ ++V LIS G++ + K L Sbjct: 71 TEFLSANIAFSVKNLQILS--IKLMIYFFIAVGPIALTSLVVGLISSYAQVGVLLTSKPL 128 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +K+NP+ G K+MFS ++ ELLKA ++ ++G ++ ++ ++ + Sbjct: 129 MFDLNKINPIEGFKKMFSMRSVVELLKAFIRLGVIGYISYDYVKGQVGVILETTGMDISS 188 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + M + + + +I + D ++Q + + K L+MS+Q+I++E+KQ+EG+P +K Sbjct: 189 ILKAIMSMTVDIGIKAGIALIALAVLDYYYQRYEYNKNLKMSKQEIKEEYKQTEGNPQIK 248 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +I++ QR A RRMM DVP ADVI+ NPTH+++ ++YD N+ APKV+AKG L+A I Sbjct: 249 SKIKEKQRQMAMRRMMQDVPSADVIITNPTHFAIGIKYDLNEFDAPKVIAKGQDLIAQNI 308 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 ++I ENNV +E PLARALY E+GQ +P LY AVAEVLA+V+++ Sbjct: 309 KKIALENNVTVVENKPLARALYDSVEVGQFVPPDLYQAVAEVLAYVYRINNR 360 >UniRef50_B0MPC8 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPC8_9FIRM Length = 353 Score = 386 bits (991), Expect = e-106, Method: Composition-based stats. Identities = 117/355 (32%), Positives = 205/355 (57%), Gaps = 3/355 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ ++KTE TP + + R++G++ +S+E+ + ++ + + G + + L + Sbjct: 1 MA--GEEKTEKATPKKRKDTRKKGEVLQSKEVAVAVFVVGIFAFLAIFGNYMFQMLLNFM 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + N + + + + P+++ V+++++ ++ +FS +++ Sbjct: 59 EQSMSSIDKTGNTVEFAMSVFWKVAIICICTVGPILAVGVVLSVLPVIVQTKGLFSMEAM 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PKFS+LNP GIKR+FS Q L+K +++ I+V ++ F + + +L+ I Sbjct: 119 KPKFSRLNPFTGIKRLFSMQALVGLVKGLIEIIVVVAILYFQVMDRINEFKKLIDTDVIK 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + + + ++ + D FQ +S KKL+MS+Q+++DE+KQ EGDP +K Sbjct: 179 IVAYISETAMSLIVTIFVMLVFVAAADYVFQWWSFEKKLKMSKQEVKDEYKQLEGDPQIK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKM-SAPKVVAKGAGLVALR 299 G+I++ Q+ A++RMM +VP ADV+V NPTHY+VAL+YD AP VVAKG +ALR Sbjct: 239 GKIKRKQQEMAQQRMMQEVPSADVVVRNPTHYAVALKYDRKTAYRAPVVVAKGTDALALR 298 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 I + E+NV E PLAR LY +IGQ+IP + Y AVAEVLA V++ + RL Sbjct: 299 IVAVAQEHNVYITENRPLARGLYEAVDIGQEIPREFYTAVAEVLAMVYEEQHKRL 353 >UniRef50_A7FED7 Flagellar biosynthetic protein FlhB n=25 Tax=Enterobacteriaceae RepID=A7FED7_YERP3 Length = 377 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 129/378 (34%), Positives = 202/378 (53%), Gaps = 3/378 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ S +K+E PT +L KAR++G IPRS+++T L+ ++ + L Sbjct: 1 MSNSSGEKSEKPTTGKLSKARKKGDIPRSKDVTMAAGLVTSFILLSLFLPY-YKELISQS 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + S +ND L Q +L L + + L ++++ ++ GG F+ L Sbjct: 60 FVSVSQLASQLNDQGA-LEQFLLANLFIFAKFLATLVPIPLFSMLATLIPGGWNFTPVKL 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 P KL+PL GIKR+FSA G E+LK + K +V + ++ L Sbjct: 119 IPDLKKLSPLAGIKRIFSASNGTEVLKMLAKCSIVLYTLYLVVHSSLDDLLHLQTLPLEE 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ L + V+ D+ KK++M++Q+++ E K ++G+P +K Sbjct: 179 AITQGFAQYHHILLYFIAIVVVFAIIDIPLSHHLFTKKMKMTKQEVKQEHKNNDGNPEIK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R+RQ+QR A ++ VP ADVI+ NPTH+SVAL+Y K SAP +VAKG +AL I Sbjct: 239 SRVRQLQRQYAIGQINKTVPSADVIITNPTHFSVALKYAPEKASAPYIVAKGKDDIALYI 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 R I ++ + +E PPLARA+Y ++ QQIP QLY A+A+VL +V Q+K WR +P Sbjct: 299 RSIAQKHKIEIVEFPPLARAIYHTTKVNQQIPAQLYRAIAQVLTYVMQIKSWRSGQASKP 358 Query: 361 VQPTHLPVPEALD-FINE 377 V THL +P+ + F +E Sbjct: 359 VLNTHLGLPKEMQRFHDE 376 >UniRef50_C1DW37 Flagellar biosynthetic protein FlhB n=3 Tax=Sulfurihydrogenibium RepID=C1DW37_SULAA Length = 352 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 123/345 (35%), Positives = 200/345 (57%), Gaps = 1/345 (0%) Query: 8 KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFD 67 KTE TP R +KAREEGQ+ +S ++ L L V V+ F L + L G Sbjct: 7 KTEKATPKRRQKAREEGQVLKSTDVAVALSLFVVFLVMIFYIPFLYKYLLGYFKYTFSNP 66 Query: 68 HSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKL 127 +I + + I + + +LP +S + +V +++ V G +F+ K L PK SK+ Sbjct: 67 FYLIPEESG-KNFIWFTFKVLAILILPFVSILFIVGIVANVAQFGFLFTLKPLTPKLSKI 125 Query: 128 NPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMD 187 NP+ G++R+FS T EL+K+ILK L V+ F + + + M + + + Sbjct: 126 NPISGLQRLFSLSTLFELVKSILKLSLALFVSYFLVSYLLDGFLVYMTANINSQIYILAK 185 Query: 188 LVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQ 247 + + + IP+ D F++ + + + L+M++ ++++E K EG+P VK IR+ Sbjct: 186 TIIILIMAFTFLSIPIAIADFFYRRYEYEENLKMTKDEVKEERKSYEGNPIVKKEIRKRM 245 Query: 248 RAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAEN 307 R A +RM+A+VPKADV++ NP HY+VAL+Y++ KM AP+V+AKG L+AL+I+E+ E+ Sbjct: 246 RQLALKRMIAEVPKADVVITNPDHYAVALKYEKGKMKAPQVIAKGQDLIALKIKEVAKEH 305 Query: 308 NVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 NV +E PPLAR+LY E+G IP Y AVA++LA +++ K Sbjct: 306 NVKIVEDPPLARSLYSSCEVGDYIPEDFYEAVAKILAVIYKQKAK 350 >UniRef50_C5SN70 Flagellar biosynthetic protein FlhB n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SN70_9CAUL Length = 355 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 126/356 (35%), Positives = 213/356 (59%), Gaps = 7/356 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+DE +DKTE + +LE+AR++G + +S ++ L L+ +++ G +A L+ L Sbjct: 1 MADEGEDKTEEASARKLEEARKKGDVAKSADVPQALSLIAACALVMLYGDKIALSLTETL 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVA----LISPVMLGGLVFS 116 + H + + +L+ + + M +LP+I+ ++LVA I + GL+FS Sbjct: 61 RVFVAAPHLLRD--SLMGDGGLTIAHHLMGQVLPIIALILLVAGAAGAIGSLAQTGLMFS 118 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 + L+P FSKLNP+ G KR+F + K ++K I VG +T L + L Sbjct: 119 TEKLKPDFSKLNPMAGFKRLFGVDALIQFAKTVIKLIAVGVITWMILKGRAGDVAGLAGA 178 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 SP+ + A ++ A+ V L ++ G D F Q ++++M++ +++DE+KQ+EGD Sbjct: 179 SPLMVLPYAKEVFFSLAVAVCLFMLLEGGADYFIQKLRFSQRMKMTKTEVKDEYKQTEGD 238 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 PHVKGR++Q++ +R+RMMA+VPKA V++ NPTHY+VAL+YD + AP VAKG + Sbjct: 239 PHVKGRLKQIRMEKSRQRMMANVPKATVVITNPTHYAVALRYD-EETPAPLCVAKGVDTL 297 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 AL+IRE+ ++++ +E PPLARALY ++ + IP + AVA+++++V KR Sbjct: 298 ALKIREVAGDHDIAIVEDPPLARALYAAIDVDEIIPETHFQAVAKIISFVMVRKRR 353 >UniRef50_A6M184 Flagellar biosynthetic protein FlhB n=4 Tax=Bacteria RepID=A6M184_CLOB8 Length = 613 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 117/349 (33%), Positives = 196/349 (56%), Gaps = 1/349 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 DDKTE TP + ++R +GQI RS++++ + +++ +I L +L Sbjct: 265 GDDKTEEATPKKKSESRNKGQIARSKDVSVAITMVICTLLISSLWGMLTNGFKEVLIYFF 324 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 +F + I I + + LLP +++ +I+ ++ G + + + L+P F Sbjct: 325 NFPMIGDFNHATISNLAITTVIKIGSYLLPFALPIMVGGVIASLLQTGFIITAEPLKPSF 384 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNPL G+K M S ++ +L K ++ +V + ++ ++ ++ + + Sbjct: 385 GKLNPLSGLKNMISKRSIVDLSKNLVVITIVSIICYKYISGNYQSILGISNLYLPSLSDE 444 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +LV + + ++ + G D F Q+ H K++RM++Q+++DE+KQSEGDP +KG+I+ Sbjct: 445 VKNLVVGIFKQICIVLVIIAGIDYFLQVRMHNKEMRMTKQEVKDEYKQSEGDPKIKGKIK 504 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENK-MSAPKVVAKGAGLVALRIREI 303 Q QR +RMM V A V++ NPTH ++A++Y+E K M APKVVAKGA VA +I+ I Sbjct: 505 QRQRELGMKRMMQSVADATVVITNPTHLAIAIKYEEGKDMEAPKVVAKGADYVAFKIKSI 564 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 EN VP +E PLAR +Y E+ Q IP LY AVAE+L V +LK+ Sbjct: 565 AKENEVPVIENKPLARLMYDRVEVDQDIPQDLYQAVAEILVVVMKLKKK 613 >UniRef50_C1ZJL2 Flagellar biosynthetic protein FlhB n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJL2_PLALI Length = 360 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 122/350 (34%), Positives = 200/350 (57%), Gaps = 1/350 (0%) Query: 1 MS-DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+ DES DKTE PT R +ARE+G + +S++LT+ ++L V+W+ G ++A ++ + Sbjct: 1 MAEDESGDKTEDPTERRRSEAREQGNVVKSQDLTAAALMLGSAGVLWWHGRNVAEYMARL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + L D N ++ + E+ + PL+ + L A+ ++ G +FS + Sbjct: 61 MRNSLSAAPWTTFDQNDLVSLAWAHLGESGWQVAPLLILLALAAIAINLLQVGFLFSPEV 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 LQPK+ ++NPL GI+R+FS + A L + K L+GSV +F++ + L + Sbjct: 121 LQPKWERINPLSGIQRLFSITSVARLGANLAKLALLGSVATWFVYDGLHRFAALAHQPLT 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A + + L + D FQ + + + L+MS+Q+IRDE+K+ +GDP + Sbjct: 181 VVAVVAGSELISLIFWMALAIFVAALADFAFQWWKYEQDLKMSKQEIRDEYKEMDGDPLI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 + R R+ R + R + V ADV++ NPT ++A++YD M AP VVAKGAG +A + Sbjct: 241 RMRRREAHRKLTQGRELQSVKTADVVITNPTEIAIAIKYDVATMPAPIVVAKGAGELAAQ 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 IR + AEN VP +E P+ARALY+ +G IP LYA AE+LA+V+++ Sbjct: 301 IRRLAAENGVPIIERKPVARALYKLTRVGDPIPSDLYAVFAEILAYVYKI 350 >UniRef50_B4U884 Flagellar biosynthetic protein FlhB n=3 Tax=Bacteria RepID=B4U884_HYDS0 Length = 353 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 119/352 (33%), Positives = 202/352 (57%), Gaps = 2/352 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ S++KTE TP+R K + EG + +S+E+ S L++LV ++F G + S ++ Sbjct: 1 MA--SENKTEKATPYRRGKLKSEGNVAKSQEVVSALLMLVSTGALFFIGYKIFILFSDLI 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 G P+ + L ++ + + PL VL+ + ++ G +F+ K L Sbjct: 59 LDGSLRIDDPSFTPSDATKFLGLSFKKLLSDITPLFILAVLIVVFGYILQFGFIFTFKPL 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +P FSKLNP+ G+K +FS EL+K LK +L+ + F L+ + ++ SP Sbjct: 119 EPNFSKLNPVDGLKNLFSLNALFELVKNSLKVMLLLIASFFILYFSFHTLVFSSYMSPSK 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + L+ + + + + + G D ++ F + K+++MS+Q+++DEFKQ EG+ VK Sbjct: 179 GLSEIARLIFKLLISIGIIGLMLAGLDFAYKKFDYEKRIKMSKQEVKDEFKQFEGNIEVK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +IR+ +R RMM +VPKA V++ NPTH++VAL+Y + AP VVAKG +A +I Sbjct: 239 AKIRRRMMELSRSRMMQEVPKASVVITNPTHFAVALRYIPKQDRAPIVVAKGQDYMAKKI 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 EI N+VP + P LARALY+ +I ++IP + Y AVAE++A++ + K+ Sbjct: 299 IEIAELNDVPVVRKPELARALYKAVDIEEEIPPEFYKAVAEIIAYIVKRKQR 350 >UniRef50_C5RFV5 Flagellar biosynthetic protein FlhB n=1 Tax=Clostridium cellulovorans 743B RepID=C5RFV5_CLOCL Length = 607 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 112/348 (32%), Positives = 195/348 (56%), Gaps = 1/348 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +D+K+E T +L A+++GQI RS++L + L + G R+S ++ Sbjct: 261 ADEKSEEATSKKLADAKKKGQIARSKDLGLGITFLATAFGLAALGNMFIDRMSNIIMKFF 320 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + + + LI + + + + + +LP+ V++ + + + G + + + L+P Sbjct: 321 SVTNGNLTEDGLI-EILKIAMIDGAILILPIAFIVMVTGVAASLAQTGFMNTSEPLKPDL 379 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 K+NP+ G KR+FS ++ +LLK + I+VG V + +M L+ + Sbjct: 380 KKINPVDGFKRIFSMRSVVDLLKNVTIIIIVGYVGYKLVSDDIVDIMLLINLKEGAILYE 439 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +V L + L + + D +Q LK++RM++Q++++E+KQ EGDP +K + + Sbjct: 440 LKKIVTSILLKIALILSVIGIADYMYQKKKFLKEMRMTKQEVKEEYKQMEGDPEIKAKRK 499 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q + +R RMMA VP A V+V NPTH++VAL+Y+E AP VVAKG +A +I+EI Sbjct: 500 QKMKELSRARMMAAVPNATVVVTNPTHFAVALKYEEGSAGAPMVVAKGTDNIAFKIKEIA 559 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 EN VP +E PLAR +Y+ +I ++IP +Y AVAE+LA V ++K+ Sbjct: 560 KENKVPIIENKPLARLIYKEVDIDEEIPIDMYQAVAEILAMVLKMKKR 607 >UniRef50_B8FTQ2 Flagellar biosynthetic protein FlhB n=2 Tax=Desulfitobacterium hafniense RepID=B8FTQ2_DESHD Length = 350 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 114/350 (32%), Positives = 197/350 (56%), Gaps = 2/350 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KT TP R ++AR++GQ+ +S E+ S L+L+ + ++ F ++ ++S + Sbjct: 3 EKTFQATPRRRQEARKKGQVFKSTEMVSALMLVSFIGLLKFYVPTMLEKVSQIFPYVYGL 62 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + ++ L+ + + PL ++A + + +F+ + L+P+ S+ Sbjct: 63 SAEW--TARSVASLMVDLLWLGVQIVAPLFVVGAVIATGANYLQVRSLFTLEPLKPQLSR 120 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 ++ + G KRMF + EL+K++LK +G + ++ + + Sbjct: 121 ISMISGAKRMFGMKAWVELIKSLLKVTFIGYFLYATIRDNFEIFPVMARLTVGQGAMFIG 180 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 L+ + L + D +Q + + K L+MS ++++ E+KQ+EG+P +KG I++ Sbjct: 181 GLIVELGWKIALSFFVIAAIDFLYQWWDYEKNLKMSHEELKQEYKQTEGNPQLKGEIKRK 240 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 QRA + RRMM D+ ADV+V NPTHY+VAL+YD + SAP VVAKGA +A RI+++ + Sbjct: 241 QRAMSMRRMMQDLKTADVVVTNPTHYAVALRYDPKENSAPVVVAKGADEIAQRIKQLAKD 300 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 + T+E PLARAL+ AEIGQ +P LY AVAEVLA+V++LKR + G Sbjct: 301 YGIITMENKPLARALFAQAEIGQAVPADLYKAVAEVLAFVYRLKRKKFTG 350 >UniRef50_B0THC3 Flagellar biosynthetic protein flhb, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THC3_HELMI Length = 362 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 124/350 (35%), Positives = 206/350 (58%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +KTE PT R +AR++GQ+ +S+E+ + LILL G + GV + M+ L Sbjct: 13 AGEKTEKPTAKRRSEARKKGQVAKSQEVNTALILLFGFLALRSLGVQTMDGMERMMVYLL 72 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 P ++ + ML + P + + L++ + G +FS + L+ + Sbjct: 73 GTVTLEEVTPVSVITTGTTIAIRTMLMIAPFMLAAMAAGLLASYLQVGFLFSSEGLKMNW 132 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLN + G+K +FS+++ EL+K++LK ++ V + H +L+ TA+ Sbjct: 133 GKLNVIAGLKNIFSSRSLVELVKSLLKVSVISYVAYSAVVKHLHLFPKLLGMDVQTAVAA 192 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 ++ V + ++ + D +Q + H + L+MS+Q+++DEFKQ+EGDP +K +I+ Sbjct: 193 ISEVAYDVGFRVAVLLLLVAALDYGYQWYKHEESLKMSKQEVKDEFKQAEGDPQIKSKIK 252 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q R A RRMM ++PKADV++ NPTH++VAL+Y+ M+AP V+AKG VAL+IR + Sbjct: 253 QRMREMAMRRMMQELPKADVVITNPTHFAVALKYESGSMTAPVVIAKGQDYVALKIRAVA 312 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 ++ +P +E PLAR LYR EIGQ+IP +L+ AVAEV A+V++LK+ R Sbjct: 313 QDHGIPLVEDKPLARTLYRAVEIGQEIPAELFQAVAEVFAFVYRLKKKRA 362 >UniRef50_Q8D3G7 FlhB protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D3G7_WIGBR Length = 385 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 153/379 (40%), Positives = 237/379 (62%), Gaps = 5/379 (1%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS++ + +K E PTP+RL+KAR +G IPRSRELTS IL+ G +IWF G +L ++ Sbjct: 1 MSNKDELEKQEDPTPNRLKKARSKGNIPRSRELTSFSILIFGWILIWFTGNNLLDKIIVE 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L L+F + N IL I L+ ++ + P+I ++++ +IS +LGG VFS KS Sbjct: 61 LKKNLNFKLYLYEHINYILVNIYLISKKFFFIIFPIIFIIMIITIISSGLLGGWVFSKKS 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L FS+LNP I R+FS E+ K + K + F+LWH Q+ L + Sbjct: 121 LNIDFSRLNPYKNISRIFSKNVFIEMAKTLFKFFFMLFSCIFYLWHTRFQISDLSDNNYS 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ N + ++ C +++L IP+V FD FQ+F+ K LRMS+++++DE K++EG+P + Sbjct: 181 NAIKNCILIISKCVFVIILSSIPIVFFDSIFQLFTFKKNLRMSKKEVQDENKENEGNPQL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K IR+ QR RMM +V K+DVI+ NPT+Y+V L+Y+ M AP ++AKG G +A++ Sbjct: 241 KHYIRKKQRHIYNMRMMQNVEKSDVIIVNPTNYAVGLKYE-KNMKAPVLLAKGTGNIAIK 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I+E E +P + PPLARA+Y++ IG+ IP +LY +VAE+L WV+ LK W+ GG Sbjct: 300 IKEKAQEKFIPIIAVPPLARAIYKYCNIGEYIPIELYESVAEILTWVYNLKNWKKLGGNP 359 Query: 360 PVQPTHLPVPEALDFINEK 378 P +P + +P ++IN++ Sbjct: 360 PKKPIGIKIP---NYINKR 375 >UniRef50_B6IS89 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodospirillum centenum SW RepID=B6IS89_RHOCS Length = 359 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 135/355 (38%), Positives = 214/355 (60%), Gaps = 3/355 (0%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+++ D KTE PT +L ARE+GQ+ +S E+ +L IL G+ ++ R L Sbjct: 1 MAEDQDQDSKTEEPTDKKLSDAREKGQVAKSMEVGNLFILASGLVMVLLLLPWSGRILWD 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + H+I+ P + + L + AL P + ++L AL +P++ GL+FS + Sbjct: 61 AMMPFVERPHAILMAPAALGDVLTDLTLDIAFALAPTLVLLLLAALAAPIIQVGLMFSAE 120 Query: 119 S-LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 + + +K+NPL G+K S + E LK++ K +LVG V L W + +A Sbjct: 121 NVFKFDLNKVNPLTGLKNKVSLKNLVEFLKSLGKLVLVGIVVSVLLLPLWTSIEHFLALP 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + + VV+ + + G D FQ + ++++RM++Q+++DE+KQ+EGDP Sbjct: 181 LPSVIVETRHEAAKLIAAVVIVLGAIAGADYAFQRYQFMQQMRMTKQEVKDEYKQTEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K +IRQ++ +R RMMA VP ADV+V NPTH++VAL+YD + MSAP+VVAKGA L+A Sbjct: 241 LIKSKIRQLRMQRSRNRMMAAVPSADVVVTNPTHFAVALKYDASAMSAPRVVAKGADLIA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 RIRE+ E VP + PPLARAL+ AEI ++IP + Y AVA+V+++V++LKR Sbjct: 301 KRIRELAEEAGVPVISNPPLARALFATAEIDEEIPAEHYKAVAQVISYVFKLKRK 355 >UniRef50_A7HWA1 Flagellar biosynthetic protein FlhB n=9 Tax=Alphaproteobacteria RepID=A7HWA1_PARL1 Length = 359 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 130/360 (36%), Positives = 211/360 (58%), Gaps = 2/360 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D+ D +KTE PT +LE+A ++G + +S+E+++ +++ G + I S A L G Sbjct: 1 MADQDDSEKTEEPTHRKLEEAHKKGDLVKSQEVSTWFVMIGGATAIALMAPSTASSLMGS 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L+ L +I D + + + A ++++ ++ +V AL+ ++ VF+ ++ Sbjct: 61 LTVFLAQPETIPMDAEHLRRIWLNVGSSAFMSMIGPLAVLVGAALVGHLIQHAPVFTAEN 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++PK SK++P G++R+F ++ L K ILK +VGSV+ +W ++ +M Sbjct: 121 MKPKLSKISPKEGLQRLFGPKSLMNLAKGILKLTIVGSVSVLIIWPERDRLALMMTWEIA 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + L V+ + + D F+ +KK RMS Q+++DE+KQ EGDP V Sbjct: 181 QLLPLVQMLALKMFAGVIAVMTVVAALDYLFERMQWMKKQRMSIQEVKDEYKQMEGDPTV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K ++RQ++ R+RMMA VP A VI+ NPTHY+VAL+Y++ M AP VVAKG VA R Sbjct: 241 KAKLRQIRAERGRKRMMAAVPTATVIITNPTHYAVALKYEQG-MGAPVVVAKGVDAVAFR 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+G E+ VP +E PPLARAL+ +I Q+I + Y AVAEV+ +V +LK G+R Sbjct: 300 IREVGQEHEVPIIENPPLARALHATVDIDQEIQPEHYKAVAEVIGYVMRLKAKIGGRGRR 359 >UniRef50_D0IYF3 Type III secretion exporter n=11 Tax=Comamonadaceae RepID=D0IYF3_COMTE Length = 393 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 142/378 (37%), Positives = 218/378 (57%), Gaps = 1/378 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ S DK T +L+K RE+GQ RSR+L+ L IL G ++ G + L + Sbjct: 1 MSE-SQDKNLPATERKLQKTREDGQGARSRDLSHLAILGTGALLMLMGTQPMINHLREAM 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + L F+ + P L+L + ++ + + +++S V GG +FS K + Sbjct: 60 ARQLVFNAAAAKTPALMLERFQSMLVLGLGIAVIFALVTTTASVLSGVAAGGWIFSFKPI 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 QP+F KLNPL G+K +FS Q ++K + TI++G V ++ + ++ + A+ Sbjct: 120 QPRFGKLNPLSGLKNLFSKQQLTTVVKMVFMTIVLGFVAWKYMSANIAEIASVSAQPSPM 179 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ + L+++ V+ + DV Q F +L+MS ++++ E K+SEG+P +K Sbjct: 180 ALTMVGSWLTTGITLLLIVVLLVALIDVPLQDFLFKSRLKMSHEEVKQEHKESEGNPQLK 239 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G+IRQ QR A R ++ VPKAD +V NPTHY+VAL+YD+ M+AP+V+AKG LVAL+I Sbjct: 240 GKIRQKQREIADRASVSAVPKADFVVTNPTHYAVALRYDDASMAAPQVIAKGTDLVALKI 299 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 REI + +P LE+P LARALY HA++ Q IP LY AVA+VLA+V++LK G P Sbjct: 300 REIAGAHQIPVLESPMLARALYAHADLDQAIPAALYTAVAQVLAYVYRLKAALSGQGPMP 359 Query: 361 VQPTHLPVPEALDFINEK 378 PVP LD + Sbjct: 360 DALGEPPVPVELDPHRGR 377 >UniRef50_A9BHY6 Flagellar biosynthetic protein FlhB n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BHY6_PETMO Length = 363 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 128/343 (37%), Positives = 198/343 (57%), Gaps = 2/343 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 DKTE PTP RLEKAREEG IP+S E + L +W L + + L Sbjct: 21 DKTEDPTPRRLEKAREEGNIPQSNEFNMAVSFLSISLFLWIIFEPLLNDIFKVFYDYLSL 80 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 D P +LG I + L+ V+V+ + ++ +F+ KSL+ SK Sbjct: 81 DLDY--SPTDLLGYEITAHMNLYIKLILFFVVAVVVSTLLGMIQTKFLFTFKSLKLDLSK 138 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 +NP+ G KR+FS ++ EL+KA+LK ++G +T + +W +++ L E + Sbjct: 139 INPIKGFKRLFSLRSVVELIKALLKLTILGLLTYNIIKSNWFKILSLAGEETGFSFNVIF 198 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 DLV + + ++ + FD ++Q + + K+L+MS+ +++ E K+ EG+P +K R R++ Sbjct: 199 DLVINILFQLGIVLLLLSLFDFWYQRYEYKKELKMSKYEVKQERKEIEGNPEIKQRQREL 258 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 R AR RMM VP+ADV++ NPTHY+VA++Y +M AP VVAKG VA +IREI + Sbjct: 259 MRNLARSRMMQKVPEADVVITNPTHYAVAIEYKAEEMQAPIVVAKGKDEVAFKIREIAFK 318 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 + +P LE P LAR +Y E+ ++IP LY VAEVLA+V++L Sbjct: 319 HGIPILERPALAREIYEKVELNEEIPEDLYTLVAEVLAYVYKL 361 >UniRef50_Q67K27 Flagellar biosynthesis protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K27_SYMTH Length = 361 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 123/354 (34%), Positives = 202/354 (57%), Gaps = 1/354 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 ++TE PTP RL+KAREEG++ RS +L + L L+ + G ++++G + Sbjct: 8 ERTEEPTPRRLQKAREEGRVARSTDLVAGLGLVAATLALRGLGGYSVQQVTGGMVGAFET 67 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + P + + A+LP+ VV + +++ + +F+ ++L P+F+ Sbjct: 68 LRPLELTPETTAAVMQDWALIGLRAVLPIALVVVAIGVVAGTLQTRFIFTLRALVPRFAT 127 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LNP+ G+ R+FS +T EL+K ++K +G + + PQ L+A++ + Sbjct: 128 LNPITGLTRIFSLRTVTELVKGLIKLAAIGYIAYRSVRGLVPQFPNLIAQTVPAGLSAIA 187 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 D+V L V L + + D +Q + + +RM++Q+++ E ++ EG P +K R RQ Sbjct: 188 DMVLDVMLAVGLAYLVVGVLDYGYQYWEFRRSMRMTKQEVKQEHREQEGAPELKSRQRQR 247 Query: 247 QRAAA-RRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGA 305 R A RRR + +VP ADV+V NPTH++VAL+Y+ K AP+VVAKGA L+AL I++I Sbjct: 248 MRELAMRRRALKEVPGADVVVTNPTHFAVALKYEAAKDEAPRVVAKGADLLALEIQKIAR 307 Query: 306 ENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 ++VP +E LAR LY E+G+ IP + Y AVAEVLA+V+ L+R GQ Sbjct: 308 AHDVPLVENRTLARGLYYDVEVGRLIPPEYYQAVAEVLAFVYNLRRQSRQAGQE 361 >UniRef50_Q6MI50 Flagella-associated protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MI50_BDEBA Length = 353 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 118/354 (33%), Positives = 200/354 (56%), Gaps = 1/354 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M++++ +K+E T R E+ R+ G + ++EL S ++LL ++ G + + + Sbjct: 1 MAEDNGEKSEEATDARREEFRKRGNVAHTKELASAVMLLAAAGGVYALGRFFFKEMYEVF 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 D + +AM+ + P++ ++ S ++ G + ++ Sbjct: 61 QHSFGDDMVKMVREGNFTEAAQYCGMKAMILIAPVLLFAGIIGAASSIVQIGFLQVEDAV 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 P F K+NP+ G KR+FS + E LK+ILK V V F L Q+ ++ S Sbjct: 121 SPNFEKVNPVEGFKRVFSMRAVVEALKSILKMGAVAMVLYFLLRSEVTQVPYMLTYSIDQ 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + +V V ++ + G D F+Q F KK+ M++Q++++E KQ EGDP +K Sbjct: 181 IIAYIGVIVVKLLGGVGAVMLVIAGADYFYQRFDLEKKMMMTKQEVKEEHKQREGDPMIK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIR++QR A +RMM+++PKADV++ NPTH +V L+Y + + AP++VA GA VA +I Sbjct: 241 SRIRRIQREMASKRMMSEIPKADVVITNPTHIAVVLKY-TDNLPAPQIVAMGADHVAEKI 299 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 +EI ENNVP +E PLAR +++ +IGQ IP +L+ AVAEVL++V++L+R + Sbjct: 300 KEIARENNVPIVENKPLARTIFKTLKIGQVIPRELFVAVAEVLSYVYRLRRKKR 353 >UniRef50_Q316G6 Flagellar biosynthetic protein FlhB n=7 Tax=Desulfovibrionales RepID=Q316G6_DESDG Length = 357 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 114/356 (32%), Positives = 191/356 (53%), Gaps = 1/356 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M + +TE TP R KAR EG +P+S+E+ + + G ++ +A + G+ Sbjct: 1 MPQQDPSRTEQATPKRRRKARGEGNVPKSQEVPKTFVTMAGTIALYVYMDHIASEMMGLY 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 P + ++ + + L LLP++ + LVA + + G +++ K Sbjct: 61 EHFFRNAVMFEATPQAVYDLLLWISGKLALMLLPIMLFLALVAYVVIRLQVGKLWAPKVF 120 Query: 121 QPKFSKLNPLPGIKRMF-SAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 +PKF++ N + G+KR+F S QT L K+IL ++G + + + L +P Sbjct: 121 KPKFARFNLIKGLKRLFISPQTLIRLGKSILMAAVIGIAPYIVIRNEMHHFLPLFYATPT 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 +++ +L ++ + D+++ + + + L+M++ +++DE KQ+EGDP V Sbjct: 181 AIGVYMLEMGMKMVKYAMLPMLVIAIADLWYTRWDYEENLKMTKDEVKDERKQAEGDPAV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K + RQ +RM+ +VPKADV+V NPTHY+VAL+YD + AP V+AKG +A R Sbjct: 241 KAQQRQKMMEVMAQRMLENVPKADVVVTNPTHYAVALRYDAVEAPAPVVLAKGVDHLAER 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 I+E+ E+ VP E PLARALYR E+G IP +LY AVA +LA + + K Sbjct: 301 IKEVAREHRVPIRENVPLARALYRQVEVGDMIPEELYQAVASLLASLMKFKARPQG 356 >UniRef50_B5YIY9 Flagellar biosynthetic protein FlhB n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIY9_THEYD Length = 353 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 130/355 (36%), Positives = 202/355 (56%), Gaps = 2/355 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M +E ++TE TP R EKAR++G++PRSRELT ++ + F G L + + Sbjct: 1 MPEELQERTEQATPRRREKARQKGEVPRSRELTGIIGTWMIFLYFVFSGTFLISIMQH-M 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + + I+ I I+ + LP+ ++ L+ + G +F+G +L Sbjct: 60 KEAFTRVKNPEFVASAIITIIKDEIKWYFIQFLPIGGVLLFGVLLVHFIQTGFLFTGATL 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 P SK++PL GIK++FS E +K ILK + +G V F L + L+ Sbjct: 120 VPDVSKISPLKGIKKLFSLNALFETIKGILKLVALGIVIYFVLKKDVNILPLLIDMDVKA 179 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 G + + L ++ + G D +Q + + + LRM++Q+I++EFK++EG P V+ Sbjct: 180 IAGISFQKIYQLILACLIMLTVFAGIDFAYQRWQYERNLRMTKQEIKEEFKETEGSPMVR 239 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIR +QR AR+RMM +VPKADV++ NP H +V ++YD M+AP VVAKGA L+A RI Sbjct: 240 ARIRSLQREMARKRMMQEVPKADVVITNPLHLAVCIKYDSKNMNAPAVVAKGANLLAERI 299 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 +EI + VP E PLARALYR +G++IP LY AVA +LA V+++K ++A Sbjct: 300 KEIARASGVPIYENKPLARALYR-IPLGEEIPEALYKAVATILATVYKIKGRQIA 353 >UniRef50_D0XSL6 Flagellar biosynthetic protein FlhB n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XSL6_9CAUL Length = 362 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 127/365 (34%), Positives = 211/365 (57%), Gaps = 11/365 (3%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++++D KTE +P +LE+AR++G + +S ++ L LL V+ GG A ++ Sbjct: 1 MAEDADPESKTEEASPQKLEEARKKGDVAKSADVAPALSLLCVTGVLIMGGGYFATNMAQ 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALIS----PVMLGGLV 114 + H+++ L G + + + + P + V+L A++ V GLV Sbjct: 61 GFLPFIAAPHAMLG--GLEAGGGVEIGARVLWVVAPFLGAVMLAAILGGVGGNVAQSGLV 118 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 S + ++PK+SK++P+ G KR+F + + +LK + VG + L H Q + Sbjct: 119 ISAEKMKPKWSKVSPMAGFKRIFGPDGLMQFAQTLLKLVAVGVICWMVLKPHARQFETMA 178 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 A SP+T + A DL+ ++ + G D +Q K++RMS++++++E+KQSE Sbjct: 179 AMSPLTILPLARDLMIALMSSALVFLALTAGGDFVWQKMRFAKRMRMSKEELKEEYKQSE 238 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDPH+K +++Q++ +R+RMM +VPKA VIV NPTHYSVAL+Y+ +AP VAKG Sbjct: 239 GDPHIKAKLKQIRMQRSRQRMMQNVPKATVIVTNPTHYSVALRYEAG-DAAPVCVAKGVD 297 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR--W 352 VA+RIRE+ E++VP +E PLARALY +I + IP + + A A V+ +V + ++ Sbjct: 298 AVAMRIREVAREHDVPIVENVPLARALYAAVDIDETIPREHFEAAARVIGFVMKKRQPGM 357 Query: 353 RLAGG 357 R AGG Sbjct: 358 RRAGG 362 >UniRef50_Q1D9K3 FlhB/HrpN/YscU/SpaS family protein n=3 Tax=Cystobacterineae RepID=Q1D9K3_MYXXD Length = 359 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 122/355 (34%), Positives = 199/355 (56%), Gaps = 1/355 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSDES +KTE P+ +L+ +R++GQ+ +S++L+ + +LLVG++ + L L+ + Sbjct: 1 MSDESGEKTEEPSQKKLDDSRKKGQVWKSKDLSGVGVLLVGLAAVKGSWDMLETELTSLF 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + ++ + L +R +L LP+++G +V + + G +F+ L Sbjct: 61 LFSFDHLTNPVDLSVATGQLLFLGLRAVVLVSLPVLAGGAIVGGLMEYLQVGTLFTMDPL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK KLNP+ G+K +F+ + ELLK ++K + V + P + + + Sbjct: 121 IPKMEKLNPIQGMKNLFNKKAIVELLKNLIKISVTAYVVYGVVRDSMPMVAETLRQDTRG 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 M +LV A V L + FDV++Q S +K + M++++++ E+KQSEGDPH K Sbjct: 181 IMAIMGELVTRVATRVALLFVLFGVFDVWWQRKSFMKDMMMTKEEVKKEYKQSEGDPHHK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 + ++M + M V +ADVIV NP H +VAL+YD K AP+V+A+G A RI Sbjct: 241 AKRKEMHQEIMEGAQMEAVREADVIVTNPDHVAVALKYDREKDGAPRVLARGIDFKAERI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 + I E +VPTL PLA AL R E+G ++P +LY AVAEVL +V+ LK + A Sbjct: 301 KAIAREQDVPTLRNVPLAHALLR-VEVGHEVPEELYDAVAEVLNFVYGLKSGQPA 354 >UniRef50_A4XIZ4 Flagellar biosynthetic protein FlhB n=2 Tax=Clostridia RepID=A4XIZ4_CALS8 Length = 366 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 114/347 (32%), Positives = 189/347 (54%) Query: 8 KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFD 67 KTE TP + ++AR+ G + +SRE+TS LL+ V + FG L Sbjct: 16 KTEKATPRKRQEARKRGMVAKSREVTSAFALLISVLFLKFGYSLFVHPLQSYGKYFFGNL 75 Query: 68 HSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKL 127 + I D +I + +LP ++ + + G + + +SL+ F K+ Sbjct: 76 NYNIEDIADASRLFSAIITITLKLVLPFCIVIMFMTALVEWAQSGFLITSESLKVSFQKI 135 Query: 128 NPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMD 187 NP+ G KR+FS + EL+K+ILK +++G +++ + S I+ + + D Sbjct: 136 NPIEGFKRIFSINSVVELIKSILKILIIGYTGYLSTKTFAGKLLEMYDMSLISIVKFSFD 195 Query: 188 LVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQ 247 L + + + D FQ + KKL M+++++++EFKQ+EG+P +K RIR+ Q Sbjct: 196 STINLILWMSIMFFGIAVIDFIFQRQQYEKKLMMTKEEVKEEFKQTEGNPQIKSRIRERQ 255 Query: 248 RAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAEN 307 R + +RM +PKADV++ NPTHY+VAL Y+ K AP+V+AKG +A +I+E + Sbjct: 256 RRISLQRMFQQLPKADVVITNPTHYAVALLYEPEKFDAPRVIAKGKDYIAQKIKEEAKKY 315 Query: 308 NVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 + +E LA++LY E+G IP +LY AVAEVLA+V+ LK ++ Sbjct: 316 KIEIVENKELAQSLYNMCEVGDFIPPELYHAVAEVLAYVYSLKNYQK 362 >UniRef50_A4YXU5 Flagellar biosynthetic protein FlhB n=12 Tax=Bradyrhizobiaceae RepID=A4YXU5_BRASO Length = 359 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 134/353 (37%), Positives = 198/353 (56%), Gaps = 3/353 (0%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++E D DKTE PT RL++A E G + +S+EL + ++ V+ S+ + Sbjct: 1 MAEEGDTEDKTEDPTQKRLDQALERGDVVKSQELNTWFVIAAATLVMTTFSGSIGTAVLV 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + I D +L L + A+ I V+L A+ +M LV+SG+ Sbjct: 61 PMRNLIANSWMIHTDGAGLLALARSLSFAVIAAIGVPILMVMLAAIAGNMMQHRLVWSGE 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L+P SK++PL G KR+F Q A K + K +L+G+V LW ++ L+ Sbjct: 121 PLKPSLSKISPLSGAKRLFGKQAAANFAKGLFKLVLLGTVMVMILWPERLRLEALLHMDV 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 +G M L VV + + D FQ ++ +MS Q++++EFKQSEGDPH Sbjct: 181 AELLGVTMSLTTHLMGSVVALLALVAIGDYLFQYRQWYERQKMSLQEMKEEFKQSEGDPH 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VKGRIRQ+++ ++RMMA VPKA VI+ NPTHYSVAL Y+ M AP VAKG +A Sbjct: 241 VKGRIRQIRQQRMKKRMMAAVPKASVIITNPTHYSVALSYERG-MQAPVCVAKGVDNIAF 299 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +IREI +++P +E PLARALY EI ++IP + Y AVAE++ +V L+R Sbjct: 300 KIREIAKAHDIPIVENVPLARALYATVEIDEEIPVEHYHAVAEIIGYVMGLRR 352 >UniRef50_C0QA53 FlhB2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QA53_DESAH Length = 357 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 133/353 (37%), Positives = 216/353 (61%), Gaps = 3/353 (0%) Query: 1 MSDE---SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M+++ +KTE + +LEKAREEGQ+ +S E+ S+++LL GV + + +RL Sbjct: 1 MAEDPGGGGEKTEGASSKKLEKAREEGQVAKSTEVPSVVVLLAGVLALNAFAFFIYQRLI 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 +L GL F +++ ++ + + + + L PL+ V + AL+S + G V S Sbjct: 61 LVLQDGLSFTGIPLSNDVAVVHLLFVATQRLFIILGPLLLAVFVAALVSNIFQVGFVLSW 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 K++ PKFS+++P+ G + FS++ E LK+ILK ++ VT + ++RL Sbjct: 121 KAVAPKFSRIDPIKGFAQKFSSRALMEFLKSILKIAIIFGVTYMVVKSEVENIIRLYDHG 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + + + + V+L + + D FQ + ++ +M++Q+++DE KQ+EGDP Sbjct: 181 VAAILLYVLKVSLEIFIKVILVMAVLAAIDFAFQRWKFMEDQKMTKQEVKDEHKQAEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 VK RIRQ+Q AAR+RMM+DVP+ADV+V NPT ++A++YD M+AP +VAKGAG VA Sbjct: 241 QVKARIRQLQATAARKRMMSDVPEADVVVTNPTRLAIAIRYDGMTMNAPTIVAKGAGAVA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 IR I E+NVP +E LAR LY+ E+GQ++P + + AVAE+LA V++LK Sbjct: 301 ANIRRIAEESNVPLVENKALARNLYKIVEVGQEVPTEEFQAVAELLAQVYKLK 353 >UniRef50_C8W1H2 Flagellar biosynthetic protein FlhB n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1H2_DESAS Length = 354 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 116/350 (33%), Positives = 195/350 (55%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ +KTE TP +L +AR +GQ+ +S +L + +++L V + + + Sbjct: 1 MAQGGQEKTEKATPRKLLQARRKGQVAKSSDLNAAVLMLAVVLLFYSIKQQQLSSMYKYF 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 S L ++ ++ + + P++ VV+VAL+ M GLVFS +S+ Sbjct: 61 SWYLANFTQYRESQVSLMQLMVSFSIYYIKLMAPVLIVVVIVALLINFMQVGLVFSSESI 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +P+ + NP+ G KR+F+ ++ EL K I K +++G +T + + +++ + +P Sbjct: 121 KPQLKRANPIEGFKRIFTVRSLVELAKNIFKLLVIGGITYNLISGRFNELLLIFYATPAM 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + M D +Q + K +RMS+QDI+DE+KQ+EGDP +K Sbjct: 181 IFQTVSGFILRILGWGGIVYFAMALLDYLYQRYEFQKSMRMSKQDIKDEYKQTEGDPLLK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 ++R+MQR + R+ ++P+A V+V NPTH++VAL+Y E P V AKGA +ALR+ Sbjct: 241 SKLREMQRKMSLSRIREEMPRATVVVTNPTHFAVALRYSEGDADVPLVTAKGADYLALRM 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 RE+ E NVP +E LAR LY E+G +IP +LY +VAE+LA V++ K Sbjct: 301 REMAKEYNVPVIEQRELARLLYDRVEVGTEIPYELYQSVAEILAMVYKKK 350 >UniRef50_A7HLM7 Flagellar biosynthetic protein FlhB n=3 Tax=Thermotogaceae RepID=A7HLM7_FERNB Length = 384 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 127/348 (36%), Positives = 197/348 (56%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 DKTE TP + +KAREEGQ+P SREL S L L V G L L + Sbjct: 36 DKTEKATPRKRQKAREEGQVPISRELVSGLGFLFASMVFILLGKRLIDALITSTQSVFEI 95 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + I + R A L + L+ G L +LI ++ +F+ K L+ ++ Sbjct: 96 SDNDIRTLEDFIIYASQTFRPAFLVVAILVLGTALFSLIIGLLQTRFLFTFKPLKMDLNR 155 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LNP+ G+KRMFS ++ ELLKAILK ++G V + ++ +++ + S I Sbjct: 156 LNPITGLKRMFSLRSLFELLKAILKLAIIGFVGYSVIKGNFDKVLLTVDSSLIDGTLIMW 215 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 ++ + + +I + D ++ + + + ++M++Q+I++EFK+ EG+P +K R RQ+ Sbjct: 216 GVLSELIIKCGIALIVVSIADYYYSRYEYEQNIKMTKQEIKEEFKEIEGNPEIKRRQRQI 275 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 A RMM +VPKA V++ NPTH++ AL+YD + APK+VAKG VALRI +I + Sbjct: 276 MMQFAMHRMMQEVPKASVVITNPTHFACALKYDPEEDFAPKLVAKGVDKVALRIIDIARK 335 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 N+VP + P LAR +Y E+G IP +LY AVAEVLA+V+ L+ R+ Sbjct: 336 NDVPIVRNPRLAREIYYSTELGDIIPEKLYKAVAEVLAYVYTLREGRI 383 >UniRef50_Q0EZ55 Flagellar biosynthesis protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ55_9PROT Length = 355 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 127/355 (35%), Positives = 208/355 (58%), Gaps = 3/355 (0%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLIL-LVGVSVIWFGGVSLARRLS 57 M+DE D +TE TP R E AR++GQI S+E ++ + ++ + VI G ++ Sbjct: 1 MADEQDKSQQTEEATPKREEDARKKGQIATSKEPSTAIAFTVISLIVITGLGSWFGEQMQ 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 ML+ L I + +I + + + +LP+ ++L+ L+ M+ G VF+ Sbjct: 61 HMLTNYLSGAVHIKATGEGMQKLLISAVTDMAMVVLPIAVPIMLLGLLVTFMVSGPVFTF 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 +++ PKF K++PL GIKR+FS + AE +K++LK +L+ + + +++ + Sbjct: 121 ETMIPKFEKISPLKGIKRLFSTKALAEFIKSVLKLVLISVACATIVSGMFSEILHTALKD 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 P + LV + + + DV +Q + H K LRMS+++ RDE K SEGDP Sbjct: 181 PADIAALTLFGSVKITTLVAVIFVVIALADVLYQRWEHAKSLRMSKKEQRDEHKDSEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K +IRQ+Q A+ RMM+DVP ADVI+ NPTH S+AL YD AP+V+AKG G +A Sbjct: 241 QLKAKIRQIQMQQAQNRMMSDVPDADVIITNPTHISIALAYDPLSPGAPRVLAKGKGHLA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 +IREI E+++P E PLAR+L++ ++G +IP L+ A+A +LA +++LK+ Sbjct: 301 AKIREIAREHHIPMRENKPLARSLFKQVKVGDEIPEVLFEAIAIILAEIFRLKQR 355 >UniRef50_Q2P9D1 HrcU protein n=12 Tax=Xanthomonas RepID=Q2P9D1_XANOM Length = 359 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 118/359 (32%), Positives = 183/359 (50%), Gaps = 2/359 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S++KTE PT +L AR++G++P S ++T+ +L + V+ G + + G Sbjct: 2 SEEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFVDHMRALTRIGF 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F + D I + + + +L +LP ++ ++ L+ GL S K + PKF Sbjct: 62 DFSENT-RDATAINRALAHIGIQGLLLMLPFLAACLVAGLVGGAFQTGLNASLKPVSPKF 120 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 LNP G+K++FS ++ LLK I+K IL+G V + P ++ L E+P+ Sbjct: 121 DSLNPANGVKKLFSLRSLINLLKLIIKAILIGVVMWVGIRTLMPMIIGLAYETPLDISQI 180 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 A + + L VL I + D Q + ++ RMS+ + + E+K+SEGDP +KG+ + Sbjct: 181 AWRTLSMLFALGVLLFILVGAADWSVQHWLFIRDKRMSKDEQKREYKESEGDPEIKGKRK 240 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + + V KA V+V NPTHY+VAL Y+ + P+VVAKG AL +R Sbjct: 241 EFAKELVFGDPRQRVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFA 300 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQP 363 +P + PPLARALY E+G IP QL+ VA VL WV L R G P Sbjct: 301 HNQGIPIVANPPLARALY-QVELGDAIPEQLFETVAVVLRWVDGLGRDHGDGDGNGALP 358 >UniRef50_UPI00016C3B58 flagellar biosynthesis protein FlhB n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3B58 Length = 355 Score = 372 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 129/352 (36%), Positives = 192/352 (54%), Gaps = 3/352 (0%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+++ + KTE PTP R E+AR +GQ+P S EL L+L+ GV + + G L + Sbjct: 1 MAEDVDQESKTEDPTPRRREEARRQGQVPFSAELVGSLVLVAGVLGLRYLGPDLWATMIT 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + A L + + A+LP ++ V + + V G + + Sbjct: 61 VFRADLPRVGREEFGTAEAAELLGRTALRMIGAMLPFFGLLLAVGVGASVAQVGFQLNTE 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L+P KLNP+ G+ R+FS + L + K + + V + L + + Sbjct: 121 KLEPNLDKLNPVGGLGRLFSLGSVVRGLLTVAKVLALAGVAYYVLNGRGGLIASIGMGRI 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A A LV AL + V + FD +Q + + L M++++++ E KQ EGDPH Sbjct: 181 GEAAPVAWALVMRLALYLAGAVALVAVFDYAYQRYKFEQSLMMTKEELKQELKQEEGDPH 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK R+RQ+ R +R+M+++VPKA V+V NPTHY+VAL+YD N+ SAP VVAKG G AL Sbjct: 241 VKARVRQIARERTKRKMLSEVPKATVVVTNPTHYAVALRYDSNRDSAPVVVAKGKGAFAL 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 RI + E+ VP LE PPLARAL+ GQQIP L+ AVAEVLA+V +++ Sbjct: 301 RIAKRARESGVPVLERPPLARALH-SVREGQQIPSALFRAVAEVLAFVMKMR 351 >UniRef50_A1T0L4 Flagellar biosynthetic protein FlhB n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0L4_PSYIN Length = 374 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 130/374 (34%), Positives = 215/374 (57%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD + DKTE + +L+K++ EGQI R++E S +LL + +A + Sbjct: 1 MSDNAQDKTEQASAQKLKKSKGEGQIARAKEFASACMLLGFCLYFYLSFERIAEAALNLF 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 F + + D + +L ++ + + P I VVL LI ++LGG VFS K++ Sbjct: 61 KLNFSFSVATLQDNDQMLIRLNKSLFTLIEIFFPFIFVVVLSTLIGSLVLGGWVFSFKTI 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 QPK KL+ L GIKRM+S +T EL+K+ILK ++ + FL ++ M+ L Sbjct: 121 QPKLDKLSFLKGIKRMWSLKTLVELIKSILKVAVIVYLLYSFLSNNLLYMLSLQRLPIEA 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + +L ++ ++ D+ +Q++ K+++MS+Q++++E KQ+EG P VK Sbjct: 181 SSIAVLTKLATYSLYIIAILLLYGLIDLPYQLYEFNKQMKMSKQELKEEHKQAEGRPEVK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIRQ+Q+ ++R + VP ADVI+ NPTHY+VA++YD + AP +VAKG AL I Sbjct: 241 QRIRQIQQQMSQRAITKTVPDADVIIMNPTHYAVAIKYDPKRAEAPFLVAKGNDQTALFI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 + I +NNV + +P LARA+Y ++ Q IP QL+ A+A VL++V QL+R++ +P Sbjct: 301 QRIALDNNVEVVISPALARAIYHTTQLEQMIPNQLFVAIAHVLSYVMQLRRFKKNEIDKP 360 Query: 361 VQPTHLPVPEALDF 374 + +P+ F Sbjct: 361 AHLPNFVMPKGFQF 374 >UniRef50_Q5DY36 Lateral flagellar export/assembly protein (FlhB-like) n=11 Tax=Enterobacteriaceae RepID=Q5DY36_ECOLX Length = 379 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 138/376 (36%), Positives = 216/376 (57%), Gaps = 9/376 (2%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D S ++KTE P+ +L KAREEGQ+PRS+++ L VI A + Sbjct: 1 MADSSSEEKTEKPSAQKLRKAREEGQLPRSKDMGLAASLFAAFVVISSSFPWYADFVRES 60 Query: 60 LSAGLHFDHSIINDPNLI---LGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFS 116 +H IN+P+ I L +L++ + +L LLP+ + AL+S ++ GG +F Sbjct: 61 FI-SVHQYAQEINNPDAIGQFLRHHLLILGKFILTLLPMPA----AALLSSLVPGGWLFL 115 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 K + P FSK++PL GI+R+FS++ AE K +K+ +V + L +++ + L A Sbjct: 116 PKKILPDFSKISPLKGIRRLFSSEHLAETGKMTVKSAVVLVMLWVSLRNNFAAFLGLQAL 175 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 AM + + L V+ I DV K L+M++Q +++E+K EG Sbjct: 176 PFKLAMNDGLSLYASVMRNFVILFIFFALLDVPLAKALFTKGLKMTKQKLKEEYKNQEGK 235 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P VK R+R++QR A ++ VPKA+V++ NPTHY+VALQYD+++ +AP VVAKG + Sbjct: 236 PEVKARVRRLQRQLAMGQIRKVVPKANVVITNPTHYAVALQYDQSRAAAPFVVAKGTDEI 295 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 AL IR++ AE+ V +E P LAR++Y ++ QQIP QLY A+A VL +V Q+K WR Sbjct: 296 ALYIRQVAAESQVEVVEFPRLARSVYYTTQVNQQIPFQLYRAIAHVLTYVLQMKHWRDGA 355 Query: 357 GQRPVQPTHLPVPEAL 372 RP H+ +P+ + Sbjct: 356 QPRPALNRHISIPKEV 371 >UniRef50_B8J3L1 Flagellar biosynthetic protein FlhB n=5 Tax=Desulfovibrionaceae RepID=B8J3L1_DESDA Length = 359 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 108/345 (31%), Positives = 200/345 (57%), Gaps = 1/345 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 KTE TP R+ K R EG +P+S+EL + LL G+S+++ ++ + + L Sbjct: 9 SKTEEATPKRIRKQRGEGNVPKSQELGKAVSLLGGMSILYAWIGPMSEAIKKLFRHFLSH 68 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 +P + + L+ E ++P++ + ++++++ + G +++ K +PK + Sbjct: 69 AWEFDPNPENVYSLTLELMIEVCKIIMPILLTLAVLSMLAQRLQVGKLWTTKVFKPKLQR 128 Query: 127 LNPLPGIKRM-FSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNA 185 N GIK+M FS QT +K++L ++++ ++ + ++ + + + + Sbjct: 129 FNIFKGIKQMLFSPQTILRTIKSLLFSLILSTIPAWIIYKEYQNFLPMYYATTEGVAVYM 188 Query: 186 MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQ 245 + + ++ ++ + FDV+ +S+ + ++M++ +++DE KQ++GDP VK + R+ Sbjct: 189 LQMAFKLVSYALIPILIIAAFDVWQSRYSYKENMKMTKDEVKDEHKQADGDPVVKSQQRK 248 Query: 246 MQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGA 305 A +RM+ DVPKADV++ NPTH +VAL+Y+ + AP V+AKGA +A +I++ Sbjct: 249 KMMEAMSKRMLQDVPKADVVITNPTHIAVALRYNATEAPAPVVLAKGADHLAEKIKQAAR 308 Query: 306 ENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 E+NVP E PLARALY+ AE+G IP +LY AVA VLA +W+LK Sbjct: 309 EHNVPIRENVPLARALYKSAEVGDMIPEELYKAVATVLAAIWKLK 353 >UniRef50_B1I5J8 Flagellar biosynthetic protein FlhB n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I5J8_DESAP Length = 359 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 122/359 (33%), Positives = 198/359 (55%), Gaps = 3/359 (0%) Query: 1 MSDESDD---KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M++ D KTE PTP RL++AR +GQ+ +S +LT + L + + + G RL Sbjct: 1 MAETRDSGQLKTEQPTPRRLQEARRKGQVAKSLDLTGAVTLAALLLLFFVGLEWFIIRLQ 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 + L S + ++ + A+LP ++ V ++ G +F+ Sbjct: 61 RLFLVYLQNFTSYSLTAENVNYLVLQSLALLGGAVLPAVAVAFFVTVLVSFAQVGFIFAP 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 L K +LNP+ G KR+FS++ E KAILK VG + + L+ ++ L S Sbjct: 121 SVLAVKLERLNPVQGFKRIFSSRGLFEFAKAILKICFVGILCFWVLYARVGDLLVLSVTS 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 P + +++ A + + D+ +Q ++H K L M+R ++RDE++Q+EGDP Sbjct: 181 PGQGLYLLHNVLLTVAAAAAGAYLLIAVLDLVYQRYAHHKSLMMTRFEVRDEYRQTEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 H+K +R+ QR + R+ +VP+A V+V NP H +VAL+Y E +M AP V AKGAG +A Sbjct: 241 HLKSWLRKRQREISMNRIKDEVPRATVVVTNPIHVAVALRYREGEMDAPLVTAKGAGYLA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 RI+E+ A++ VP +E LA+ LYR +G+ +P +Y AVAE+LA +++LK R AG Sbjct: 301 ERIKELAAQHKVPVVENRELAQYLYRRVPVGESVPVAVYQAVAEILAMIYRLKAKREAG 359 >UniRef50_B1K3A0 Type III secretion exporter n=13 Tax=Betaproteobacteria RepID=B1K3A0_BURCC Length = 379 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 130/375 (34%), Positives = 203/375 (54%), Gaps = 3/375 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS++ DKTE TP +L KAR EGQ+ RSR++ + + +LV + +I + L + Sbjct: 1 MSEQQTGDKTEKATPQKLRKARMEGQVARSRDIGTCVGILVALKLIVVLTPAWLVELKHI 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + N + + L PL + + +++ ++ GG + S K+ Sbjct: 61 FALSFADLSGDDRLGNAVSMLFPAAVLLMCKMLAPLAAVPAGI-IVASLIPGGWIISHKN 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + PK ++LNPL G+KR+ S + + +LK +++ + + +RL Sbjct: 120 IMPKLNRLNPLSGLKRLVSGKHYMQFGTTVLKALVLMATLFIVCRSNLSGFIRLQGAPLA 179 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ +L A+ + + D+ Q + RMS++DI++E KQSEG P V Sbjct: 180 DALTGGANLFLSSAVTLSCIITVFALVDIPVQQIIFKRGQRMSKRDIKEEMKQSEGRPEV 239 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RIRQ+QR AR+ + VP AD++V NPTHY+VAL+YD + AP VVAKG VAL Sbjct: 240 KSRIRQIQRQLARQGIRKTVPTADLVVMNPTHYAVALKYDVTRAQAPYVVAKGVDEVALF 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA-GGQ 358 IR++ +NV LE PPLARA+Y +++ QQIP +LY AVA+VL++V Q+K +R Sbjct: 300 IRDVARGHNVEVLELPPLARAIYHTSQVNQQIPAELYRAVAQVLSYVLQIKAFRSGRRDV 359 Query: 359 RPVQPTHLPVPEALD 373 P PT + +PE L Sbjct: 360 SPSLPTGITIPEHLQ 374 >UniRef50_Q7UXG2 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodopirellula baltica RepID=Q7UXG2_RHOBA Length = 360 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 111/357 (31%), Positives = 197/357 (55%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD DK + + + +ARE+GQI +S++LTS +LL + ++ G ++A LSG + Sbjct: 1 MSDSGGDKKHSASERKRRQAREKGQIAKSQDLTSATLLLAAIGALYAIGGNMAAYLSGGI 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L ++ + + +A +P++ + + ++ V GL+ S L Sbjct: 61 EQALGETKLAPMTNQDATQYMLQISQRLAMAAVPMMILMFIGGVLINVFQSGLLLSTDKL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK S ++P+ G KR+ S Q L+ + K ++G + L H ++ + + S Sbjct: 121 MPKLSNISPMSGAKRILSLQGVMRLVFGMFKVGIIGGIAYLALRAHHGDVISMASLSVPQ 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + D + +L + +G+ + + +Q + + L M+ Q++RDE K +E DP V Sbjct: 181 LAKSMFDTLFGVSLWIGVGLFVLALLEYVYQWWKTEQDLMMTDQEVRDEMKDTEADPQVA 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R RQ+ R A ++ ++VPKADV+ +NPT ++A++YD M AP VVAKGAG++A RI Sbjct: 241 ARRRQVARQLAMGQLGSEVPKADVVASNPTELAIAIKYDPLTMPAPIVVAKGAGMIAQRI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 R + EN +P +E LA+ALY+ ++GQ++P + Y AVAE+L +V+Q++ ++ Sbjct: 301 RRLALENGIPVVERKELAQALYKLVDVGQEVPAEQYQAVAEILRYVYQMQGKKVPQA 357 >UniRef50_C8WWG5 Flagellar biosynthetic protein FlhB n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWG5_ALIAD Length = 361 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 125/348 (35%), Positives = 193/348 (55%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + ++TE TP R ++AR+EG++ RS ELTS + + + G ++ ++ L Sbjct: 11 AGERTERATPRRRQEARKEGRVARSPELTSAVAFAAVLVALRILGPAVWGEWENLIQRDL 70 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + + + A +LP+ + ++ L + VM +F + L P F Sbjct: 71 GGSALKSWTVEGVRALMATQVMAAARIMLPIAAVAAVIGLAAAVMQVRPLFVPQLLLPDF 130 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 +++P G +R+ S Q E LK++LK V V L QM+ L A G Sbjct: 131 QRISPATGWRRIASLQGALEALKSLLKLAAVVGVAYTSLASLAHQMINLSAAELDAVPGI 190 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 V A+ V ++ + D +Q +S + LRMS+Q+++DE K++EG+P VK +R Sbjct: 191 LGRAVFNLAIRVACAMVVIAAIDYVYQRYSLERSLRMSKQELKDELKETEGNPLVKSAVR 250 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + R A RRMM +V KADV++ NPTHY+VAL Y + M+AP+VVAKGA VA IR Sbjct: 251 RRARQIASRRMMQNVAKADVVITNPTHYAVALAYQSDTMNAPQVVAKGADFVAQEIRRRA 310 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 E++VP +E PPLA+ALYR +IGQ+IP LY AVAEVLA+V++++ Sbjct: 311 EEHDVPLVENPPLAQALYRTVDIGQEIPPDLYQAVAEVLAYVYRMRAK 358 >UniRef50_C2ED97 Flagellar biosynthesis protein FlhB n=5 Tax=Lactobacillales RepID=C2ED97_9LACO Length = 355 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 112/356 (31%), Positives = 193/356 (54%), Gaps = 9/356 (2%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 + D KTE PTP R+ +R+ G++ +S ++ + + L V + S Sbjct: 3 DKDGKTEKPTPKRIRDSRKRGEVAKSPDVVAAVALFVFAMLFVPLCEFSINHFSPYFVNY 62 Query: 64 LHFDHSIINDPNLILGQIILLIREAMLALL----PLISGVVLVALISPVMLGGLVFSGKS 119 L + +P+ ++G + + +A+L + P + +++ ++ ++ GL+F+ Sbjct: 63 LEM----LANPDQMIGSLGKIAFQAILMIFIMTGPFMLIAIVIGIVGNIVQVGLLFTATP 118 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+P F KLNPL G+K+MFS + L K+++K I+VG + P + L Sbjct: 119 LKPDFKKLNPLNGLKQMFSLRALQNLAKSLVKLIIVGYLCYKKYVETIPTLTSLSEVGTG 178 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + +++ A + + ++ + FD FQ ++H+K L+MS+Q+I+DE KQ EGDP V Sbjct: 179 KVLLFMLNICKDLATQIGILLVVVSVFDYAFQRYTHMKSLKMSKQEIKDEMKQMEGDPQV 238 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K + + R R + A V A V++ NPTH ++A++YD P+V+AKGA VA+R Sbjct: 239 KAQRKAKHREMIRNAV-AQVKDATVVLANPTHLAIAIKYDAEGAGVPQVLAKGADDVAMR 297 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 I+E + NVP +E PLARALY + G IP + Y A+AEV+A V++L++ Sbjct: 298 IKEEAKKQNVPIIENKPLARALYPKVDAGDFIPVEFYEAIAEVIALVYKLEQEAKG 353 >UniRef50_A8U5W0 Flagellar biosynthesis protein B n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5W0_9LACT Length = 355 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 113/350 (32%), Positives = 190/350 (54%), Gaps = 2/350 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+++ KTE +P +L AR++G+IP+S +LTS + +V + F G + + L Sbjct: 1 MAEKDG-KTEKASPKKLRDARKKGEIPKSPDLTSAVTFIVFILSATFLGNYILKNSLLYL 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L S+ N + + I ++ P ++ + A IS ++ G +FS + + Sbjct: 60 QNYLTAGFSVDGLENDLADIGMKAILFTLVLAGPFLAIAFVAAFISSIVQTGFLFSAEPI 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + K SK+NP+ G K MFS +T L+K + K LV + L ++ + Sbjct: 120 KFKLSKINPISGFKNMFSKKTLFTLVKNVAKLTLVFWMAYKTLETSIYLIINSSSIGTEK 179 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 DLV + + ++ + D +Q++ H K LRMS+Q+I+DE+K+SEGDP +K Sbjct: 180 IFFLMSDLVMELGTQLGVLLLILGLVDYIYQVYDHRKNLRMSKQEIKDEYKESEGDPQIK 239 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 + RQ R + + +V A ++ NPTH ++A++Y++ K P +VAKGA A +I Sbjct: 240 SQRRQRYRQLTKG-ALREVETATAVITNPTHLAIAIRYEKGKDEVPIIVAKGADHQAAKI 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 RE +VP +E P+ARA+Y+ EIGQ +P LY A+AE+LA V+Q++ Sbjct: 299 RERAKAFDVPIIENKPVARAMYKSVEIGQPVPIDLYQAIAEILALVYQME 348 >UniRef50_A9KNE0 Flagellar biosynthetic protein FlhB n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KNE0_CLOPH Length = 373 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 124/350 (35%), Positives = 193/350 (55%), Gaps = 4/350 (1%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +KTE T +LE AR+EGQ+ RS++L + LL VI +A S Sbjct: 23 GGEKTEEATTKKLEDARKEGQVARSQDLITASGLLALFMVIKLFSGYIAGGFLDAFSKSY 82 Query: 65 HFDHSIINDP---NLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 ++ + + + + +L LP+ V+VA + + +GK LQ Sbjct: 83 KEIETLAKEEMTYQIGSKLMNQMGINILLICLPVFITGVVVAFVVNIFQVKWKLTGKPLQ 142 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES-PIT 180 PKF+K+NPL G K+M S EL+K+I+K ++ + L ++ L Sbjct: 143 PKFNKINPLSGFKKMLSMDKIMELVKSIIKVGIIIYIVYNALKDELGKLYLLYEMGNLEV 202 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + +V + + + I + D +Q K +RM++Q+I+DEFKQSEGDP +K Sbjct: 203 VIAYIGSIVLDLGIKISVLFIVVGLADFIYQKIKFKKDMRMTKQEIKDEFKQSEGDPQIK 262 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +I+Q R A++RRMM +P+ADV++ NPTH++ AL+YD+ AP ++AKGA L+A +I Sbjct: 263 SKIKQKMRQASQRRMMQRLPEADVVITNPTHFACALKYDKEVSEAPILIAKGADLLAAKI 322 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +EI EN +P +E PLAR LY + +I +IPG+LY VAEVLA+V+ LK Sbjct: 323 KEIAKENEIPIVENKPLARMLYYNVDIESEIPGELYQMVAEVLAYVYSLK 372 >UniRef50_Q1NGK4 Flagellar biosynthetic protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGK4_9SPHN Length = 378 Score = 365 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 131/377 (34%), Positives = 201/377 (53%), Gaps = 7/377 (1%) Query: 1 MS--DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+ E +KTE PTP +L+ A ++G I +SREL + L+++ G+ + G SL L Sbjct: 1 MAGGSEGGEKTEKPTPKKLQDAAKKGDILQSRELGTALVVMAGIGCLAVIGPSLIDALRD 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 ML L I D + + L+ L + ++ L A+ +P +LG L F Sbjct: 61 MLVEALRIRREDIVDFSPAKRGL-DLLASIALPVAGVMLATFLAAIAAPALLGSLGFRPG 119 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + PK KLNPL G+KR+F Q ELLK+I K L+GS+ + +W ++ L Sbjct: 120 AFAPKPEKLNPLSGLKRIFGMQGLIELLKSIAKVGLLGSIGVWLIWDRLTEITGLGKAGI 179 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ + ++ L++ G+ + G DV QI K+L MS+Q+++DE K+SEG P Sbjct: 180 APAIADVGNIFIFTCLVMAGGLFLIAGIDVPAQIMQRAKRLGMSKQEVKDEHKESEGSPE 239 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +KG IR+ Q V +A VI+ NPTH++VAL+Y + +AP VVAKG +A Sbjct: 240 LKGHIRRRQFEVLSGSTRKAVAEASVIITNPTHFAVALRYKPGQDAAPVVVAKGCDAIAA 299 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 IR++ + V L+ P LARA+Y + GQ + LY AVA VLA+V++++ Sbjct: 300 SIRDLADTHGVTVLQYPELARAIYFTSRAGQIVNEGLYMAVATVLAFVFRVENKMAGEMD 359 Query: 359 RPVQPTHLPVPEALDFI 375 RP + VP+ L F Sbjct: 360 RP----FITVPDDLRFD 372 >UniRef50_A6Q2P0 Flagellar biosynthetic protein FlhB n=2 Tax=Bacteria RepID=A6Q2P0_NITSB Length = 351 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 122/354 (34%), Positives = 199/354 (56%), Gaps = 3/354 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ + KTE TP R EKAREEGQ+ +S+++ L+V + ++L + Sbjct: 1 MAKDP-SKTEKATPRRREKAREEGQVAKSQDIPISATLIVVFMLFLAYIPFAYKKLYELF 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 F + N P I L++ +P +++ ++S + G + + KS+ Sbjct: 60 --MFIFADPLYNIPQYNYSIIYLVMEFMGYLTIPFFLALLITGVVSNIAQIGFLLTFKSM 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK K++P+ G+KR+FS +T EL+K ILK I V+ F + + + +P Sbjct: 118 VPKLEKIDPIAGLKRLFSLKTLFELVKNILKLIAATIVSYFLVQFLLRDVFQYATTTPYK 177 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + L + IP+ D FF+ F + ++MS+ ++++E KQ EG+P VK Sbjct: 178 DAVLLVKYTLIMILGFAILSIPIAAIDFFFRKFEFEENIKMSKHEVKEEHKQMEGNPQVK 237 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 IR+ R + R+MA+VPKADV++ NP H++VAL+Y++ KM APKVVAKG +AL+I Sbjct: 238 SEIRKRMREMSMNRIMAEVPKADVVITNPVHFAVALKYEKEKMHAPKVVAKGKDYLALKI 297 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 +EI E+ VP E PPLARA+Y+ ++ + IP LY A+A++ A V++ +R RL Sbjct: 298 KEIAKEHGVPIEENPPLARAIYQACDVDEYIPENLYKAIAKIFAKVFKRQRRRL 351 >UniRef50_Q2RKD2 Flagellar biosynthetic protein FlhB n=5 Tax=Bacteria RepID=Q2RKD2_MOOTA Length = 374 Score = 364 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 125/346 (36%), Positives = 204/346 (58%), Gaps = 1/346 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +++KTE TPHRL++ R++GQ+ RS +L++ ++LL V +++ + + ++ ++++ L Sbjct: 27 AEEKTEEATPHRLQEVRQKGQVARSNDLSTAMVLLACVVFLYWRRETFYQAMADLITSTL 86 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 D ++ L + L L PL++ V L + G VFS + L P+ Sbjct: 87 QDGWHQQLDGGSLMALGSQLALKVGLLLAPLLALAAAVGLAANFAQTGFVFSLEPLLPRL 146 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 L+P+ G++R FS + ELLK++ K ++V V + + Q++ + + Sbjct: 147 ENLDPVKGMQRFFSRRALMELLKSLAKVVVVSLVVWQLVKGQFTQLLLTVDMGLPATLDL 206 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +V L V + + D FQ + K LRM+RQ++++E KQ EGDP V+ R+R Sbjct: 207 VSRMVYRVGLGTVAVFLALAAADYVFQRREYQKNLRMTRQEVKEEMKQMEGDPLVRSRLR 266 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + QR AR RMM VP+A V++ NPTH +VAL+Y + AP+VVAKGAG +A RI+ + Sbjct: 267 EKQRQLARHRMMHAVPEATVVITNPTHVAVALRY-REEERAPRVVAKGAGSIAERIKAVA 325 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +NVP +E PP+ARALYR E+GQ+IP LY AVAE+LA +++L+ Sbjct: 326 RRHNVPVVENPPVARALYRQVELGQEIPVALYQAVAEILARIYKLR 371 >UniRef50_A4SI11 Lateral flagellar biosynthetic protein, LfhB n=2 Tax=Aeromonas RepID=A4SI11_AERS4 Length = 378 Score = 364 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 140/374 (37%), Positives = 214/374 (57%), Gaps = 1/374 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS S DKTE + +L KAREEGQI RS+EL+S +LL+G + + S + + Sbjct: 1 MSQNSAQDKTEEASSQKLRKAREEGQIARSKELSSAGLLLLGGLAMQWMVPSFGHFFAEL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + FD DP +++ + + LLPL + L+ ++ ++ GG+V + K Sbjct: 61 MKRPQRFDWQGARDPQMMIHWTAEALLSMLWVLLPLFGFLALLLVLLSIVPGGMVLTWKK 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P KLNPL G+KRM S + ELLK++LK +L+GS L H WP +M + P Sbjct: 121 LLPSAEKLNPLKGLKRMLSTHSLMELLKSVLKILLIGSTLALMLQHQWPLLMMMNRMPPQ 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 AM A+ ++ +L+ + + DV +Q +S K+LRM++Q+++DE K SEG P + Sbjct: 181 AAMEQALQILSQAFILLGSVQMLIAVLDVPYQRWSLNKQLRMTKQEVKDEHKNSEGRPEI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +IRQ+Q AR R+ VP+ADVI+ N THY+VA++YD + +AP V+AKG +A R Sbjct: 241 KAKIRQVQGMLARARIEQRVPQADVIIVNTTHYAVAIKYDPERANAPYVIAKGVDGMAER 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IR++ +++ + P L RA+Y + Q++P LY AVA VL V QL+ + G++ Sbjct: 301 IRQVAKQHDKMVMSLPDLTRAIYYSTRVDQEVPAGLYTAVAYVLNHVLQLRAYAAGKGKK 360 Query: 360 PVQPTHLPVPEALD 373 P L VP L Sbjct: 361 PTPLAPLHVPPELR 374 >UniRef50_C4Z5H8 Flagellar biosynthetic protein FlhB n=5 Tax=Bacteria RepID=C4Z5H8_EUBE2 Length = 372 Score = 364 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 109/350 (31%), Positives = 192/350 (54%), Gaps = 6/350 (1%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +KTE T +L+ R+EGQ+ +S+EL + + L+ +I ++ +L Sbjct: 19 GGEKTEPATSKKLDDVRKEGQVAKSKELITAVSLMTLFIIIKIYVGNIGTKLIDSFKTIY 78 Query: 65 HFDHSIIND------PNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 +I+D N+ + A++P++ V++A++ + + + K Sbjct: 79 GLMGKVIDDSSKGVTVNMAASIASQAFTIILNAVIPILIIAVIIAILGNALQQRWMVTAK 138 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L PK SK+NPL G KR+FS + ELLKAI ++ + + + ++ + Sbjct: 139 PLAPKASKINPLNGFKRLFSVRQLFELLKAIAMMSIIVIMVYNCVKKNMNILLTFYDVTL 198 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 TA+ +++ + + + + D+ +Q M++Q+++DEFK +EGDP Sbjct: 199 YTALATVGNIIINLGIQISAVFLVVGFVDLLYQRHKFKNDNMMTKQEVKDEFKNAEGDPQ 258 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VKG+IR+ + +RRRMM +P+ADV++ NPTH++VAL+Y+ ++ AP V+AKGA +A Sbjct: 259 VKGQIRRKMQEISRRRMMQQLPEADVVITNPTHFAVALKYEPDEGKAPVVIAKGADYLAF 318 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 +I++ E N+ +E PLAR LY + +IG +IP +LY AVAE+LA V + Sbjct: 319 QIKDRAKEYNIAIVENKPLARILYHNVDIGTEIPPELYYAVAEILASVLR 368 >UniRef50_B3EAW0 Flagellar biosynthetic protein FlhB n=8 Tax=Desulfuromonadales RepID=B3EAW0_GEOLS Length = 357 Score = 362 bits (931), Expect = 8e-99, Method: Composition-based stats. Identities = 114/354 (32%), Positives = 191/354 (53%), Gaps = 4/354 (1%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+++ D KTE PT RLEKARE+G P S+ L+ LL G+ V++ G L L Sbjct: 1 MAEDDDKHSKTEQPTGRRLEKAREKGAPPSSQMLSQSFTLLAGIVVLYLLGSYLMNGLKS 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVML--GGLVFS 116 + + ++ + + L P+I V+ +++ ++ G L F Sbjct: 61 TTVQVYSQIGTFELTEQNVYTMMLRIFGVLFMLLAPVILAVMSTGILAHIVQDNGRLDFQ 120 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 + SKLN + G ++F+ + E+LK+++K ++G + L + L Sbjct: 121 WGRITFDISKLNFISGFGKLFNKEALVEILKSLIKIFVIGWIAYQVLRDELQNITVLAES 180 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 + + +I + D+ + + +++ L+M++Q+++DE K EG+ Sbjct: 181 DVNGILSYTGHVAFKIVTHTCGIMIVISILDMAYVKWRYIENLKMTKQEVKDETKDMEGN 240 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P +KG+I+++Q AARRR+ +P ADV++ NPTH++VAL+YD ++M AP V+AKGA + Sbjct: 241 PEIKGKIKRLQFQAARRRLTKIIPTADVVITNPTHFAVALKYDRSRMVAPMVIAKGADEM 300 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 AL I+E+ E+ V +E LAR LY Q+IP LYAAVAEVLA+V++LK Sbjct: 301 ALAIKEMAREHKVTLVENRFLARELYDQVAENQEIPESLYAAVAEVLAYVYRLK 354 >UniRef50_UPI0001C312BE flagellar biosynthetic protein FlhB n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312BE Length = 358 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 112/351 (31%), Positives = 190/351 (54%), Gaps = 6/351 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D+ +TE TP + + AR GQ+ RS ++ ++L+ G+ + G ++ + + Sbjct: 1 MADD---RTERATPRKRDDARRRGQVARSMDVNGAVVLIAGLFALSLLGPAVVGAMETSM 57 Query: 61 SAGLHF--DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 D + G + +R LA+ P+ + + +++ + GL S + Sbjct: 58 RDSFERISDPQAALTAGGLEGIAMSTLRTLALAIGPVAAVCAIAGIVANLGQVGLKPSAE 117 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +L+P+ ++NPL G + +F + E K+I+K ++G + + ++ + SP Sbjct: 118 ALKPQAQRINPLSGARNVFGPRMFFEGAKSIVKVAVIGVIVAMAVAPKMTELSATVGASP 177 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + LV + + + + D +Q ++H K+LRMS QD++DEF+ + Sbjct: 178 GQLAAELVSLVLSISQRAAIAYLVIGAIDYAYQKYTHEKQLRMSMQDVKDEFRSQQLPAE 237 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK R+ AR RMM+ VP ADV+V NPTH++VAL+YD AP VVAKG L+AL Sbjct: 238 VKSMQRRRMMQQARARMMSAVPDADVVVTNPTHFAVALKYD-GTKPAPIVVAKGQDLIAL 296 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 +IR + AE++VP +E PLAR+L+ E+GQ IP LY AVA+VLA V+++ Sbjct: 297 QIRRLAAEHDVPVIENRPLARSLHATVEVGQMIPEDLYQAVAQVLAHVYRV 347 >UniRef50_B9Z4S0 Type III secretion exporter n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4S0_9NEIS Length = 380 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 132/374 (35%), Positives = 202/374 (54%), Gaps = 3/374 (0%) Query: 1 MSDE-SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M++ DKTE TPH+L +AR++GQ+ RSR++ S + LLV + + + + Sbjct: 1 MAETRGGDKTEKATPHKLRQARQQGQVARSRDMASAIGLLVALKLAFLSMPGWLDDFRRL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + N + + +LPL +LVA +S + GG VF+ + Sbjct: 61 FALSFATLSGQGALGNTWSMLFSGTLTLLVKMILPLAVIPLLVATVS-LFPGGWVFASRH 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 QP+ +LNPL R+ S Q +++ K+I+K +++G+V L Sbjct: 120 FQPRLDRLNPLAHFGRIASPQHASDIAKSIVKALVLGAVLYHVSRGAAQDFFALQGVPLD 179 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ A L+ L + I D+ Q L++ RMS+Q+I+DE+K +EG P + Sbjct: 180 EALSRAASLLMDALLALTAVFIAFALIDLPLQTLLFLRQQRMSKQEIKDEYKTTEGRPEI 239 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K R+RQ+Q A+R + VP ADV++ NP+HY+VAL+YDE++ AP ++AKG +AL Sbjct: 240 KQRVRQLQLQMAQRGVRKSVPTADVVIVNPSHYAVALKYDEDRAEAPFIIAKGIDEMALY 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG-Q 358 IR++ AE+ V L PPLARA+Y ++ QQIP LY AVA+VL +V QLK +R Sbjct: 300 IRQVAAEHAVEVLPIPPLARAVYHTTQVNQQIPAPLYRAVAQVLTYVLQLKAFRAGSRHS 359 Query: 359 RPVQPTHLPVPEAL 372 RP P LPVP L Sbjct: 360 RPELPAELPVPHEL 373 >UniRef50_B6QWX7 Translocation protein in type III secretion n=2 Tax=Bacteria RepID=B6QWX7_9RHOB Length = 377 Score = 362 bits (929), Expect = 1e-98, Method: Composition-based stats. Identities = 109/382 (28%), Positives = 198/382 (51%), Gaps = 7/382 (1%) Query: 1 MS-DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS S +KTE PTP R ++RE+GQ+ +S E+T+ + L ++ +WF +L G+ Sbjct: 1 MSGQSSGEKTELPTPKRERESREKGQVAKSTEVTTTISLFSVIAYLWFSWDLNFSKLVGL 60 Query: 60 LSAGLHFDHSIINDPNLILGQ-IILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + D + D + G+ + + M +LPLI + + + G +++ Sbjct: 61 MDDL--ADLATRRDFSSSAGEGVFGVFSTFMDIVLPLIGVAIAAGIFGNFVQFGFLWAVD 118 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 S+ PK SK++P G KR+FS + ++LK+ILK +L+ ++ F + + + ++ Sbjct: 119 SIMPKLSKISPAEGFKRIFSLKQVVQVLKSILKIVLLSTMLYFTVKYAIGAYINSLSCGI 178 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + ++ L + L + + D FQ +H+K L+M++++++ E K+SEG P Sbjct: 179 PCITNISGAIMKLILGISFLAFVGVAILDFMFQKHTHIKSLKMTKEEVKREHKESEGSPE 238 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +KG+ +++ + + + KA +V NPTHY+VA+ Y ++++ P VVAKG L AL Sbjct: 239 IKGQRKRISQEILMSDNLENTRKASAVVVNPTHYAVAISYRPDEVAVPLVVAKGLDLTAL 298 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 ++R VP LAR L+ +I + IP ++AAVAE+L W+ Q K G Sbjct: 299 KMRAEAEAAGVPIFANVKLARMLHAEVQIEELIPQDMFAAVAEILVWIDQNKDILYNG-- 356 Query: 359 RPVQPTHLPVPEALDFINEKPT 380 P++ + + +KP Sbjct: 357 -PLERGVIDLEHEKKTGEDKPN 377 >UniRef50_Q2SH55 Type III secretory pathway, component EscU n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SH55_HAHCH Length = 345 Score = 361 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 107/344 (31%), Positives = 191/344 (55%), Gaps = 2/344 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PTP +L AR++GQ+ S+EL S +++ +++ G SL L ++ F Sbjct: 3 EKTEKPTPKKLLDARKKGQVAHSKELVSTAMMIAMYGLLFASGYSLVEALQSLIDLPARF 62 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + + + + +++ LLP I V++ A++S V G +F+ +S++ K Sbjct: 63 YGQPFGE--ALQAVLNGVFEKSLDILLPFILLVIVTAVVSNVGHVGPLFAMESVKFDLKK 120 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 ++P+ G+K++FS ++ ELLK+I+K + + + + + + + +L M Sbjct: 121 IDPVEGVKKLFSVRSLMELLKSIVKILFLSILIYWVITANLNDIRKLPHCGSDCIMPFIG 180 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 L+ A++ ++ + + D +Q H K+LRM++ +++ E+K +EG+P V G+ +Q+ Sbjct: 181 HLMLQLAMVSMVAFVIVAVLDFLYQKHEHQKQLRMTKDEVKREYKDAEGNPEVIGQRKQI 240 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 R M++ + KA VIV NPTH ++ + YD +K S P V+ K A R+++I A+ Sbjct: 241 HREMLDGGMISQIKKASVIVTNPTHIAIGIYYDGDKRSLPTVILKAKNTTAQRVKKIAAK 300 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 VP +E PLARALY AE+ IP +L VAEVL WV L+ Sbjct: 301 EGVPIMENIPLARALYAQAELENYIPSELIEPVAEVLKWVAGLE 344 >UniRef50_Q1Q6S5 Similar to flagellar biosynthetic protein FlhB n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6S5_9BACT Length = 349 Score = 361 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 123/351 (35%), Positives = 214/351 (60%), Gaps = 2/351 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D +KTE PT R+ + R++G + +S +L+S + +LVG +++ G + + + Sbjct: 1 MADT--EKTEQPTGKRISEVRQKGSVAQSPDLSSAIAILVGFLLLYALGNIMYAGMKEIT 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L P++I+ +II I + LLP++ G+++V LI M GL+F+ K L Sbjct: 59 VFTLQNLSQKDITPDIIVEKIIYYIYVSAKILLPILGGLLIVGLIVSYMQTGLLFTLKPL 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +P +KLN + G+K++F+ Q+ +LL +++K +L+G + ++ ++ L+ Sbjct: 119 KPDLTKLNVISGVKKLFNVQSFVKLLFSVVKLLLIGGIGILYIKKELAKLDNLIDIGIAQ 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 L + V + ++ + D +Q + + + ++MS+++++DE KQ+EGDP +K Sbjct: 179 FFILTTKLTFGLVMRVSIALVILAMVDYIYQKWQYKRGMKMSKKEVKDERKQAEGDPVIK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +IR Q A +RM + +PKADV+V NPTHY+VAL+YD M APKVVAKGA +AL+I Sbjct: 239 SKIRSAQIQMALKRMASAIPKADVVVTNPTHYAVALKYDRKSMHAPKVVAKGADYIALKI 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +EI N +P +E LAR LY+ ++G++IP +LY AVA+VL++V+ LK+ Sbjct: 299 KEIAKINKIPIVEERSLARTLYKTVDVGKEIPQKLYYAVAKVLSYVYGLKK 349 >UniRef50_Q5FQT1 Flagellar biosynthetic protein FlhB n=1 Tax=Gluconobacter oxydans RepID=Q5FQT1_GLUOX Length = 358 Score = 360 bits (924), Expect = 6e-98, Method: Composition-based stats. Identities = 131/351 (37%), Positives = 198/351 (56%), Gaps = 2/351 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD SDDKTEAP+ RL+KARE+GQI SRE + + LL G + I+ L ++ Sbjct: 1 MSD-SDDKTEAPSSQRLQKAREDGQIVMSREAMNFVALLGGFAGIFMVLPYLVMDFVHVM 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + ++ +L I + +P+ + V ++ L + G + +SL Sbjct: 60 QVLMANAGTVPMAQGGLLNSTDHAIEAGLKLAVPMAATVAVLCLGGGFLQTGFLIHPESL 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PKF +++PL G KR+ T + KA+ K + V P R++ P Sbjct: 120 LPKFERISPLAGFKRIAGGGTLPDTFKALAKFAIFAVVLWNISKGAIPSAPRMVGLEPGP 179 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + DL A ++L + + GFD+F+ F H+ KL+MSR+D++DE+K +EGDPHVK Sbjct: 180 LLKMMTDLGFRAASAMILAQLVIAGFDIFWMRFRHISKLKMSREDLKDEYKNTEGDPHVK 239 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GR + ++ AAR+RMMA V A V+V NPTHY+VAL Y+ AP++VAKG VA RI Sbjct: 240 GRQKALRAKAARQRMMAAVKTATVVVTNPTHYAVALVYERGGGGAPRIVAKGMDDVAARI 299 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 R+I +N +P + PPLARAL+ + +IP + + VA ++A+VW+LKR Sbjct: 300 RDIAQDNRIPIVANPPLARALF-TLPLDSEIPAEHFKVVAAIIAYVWKLKR 349 >UniRef50_C6WJP3 Type III secretion exporter n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJP3_ACTMD Length = 363 Score = 359 bits (923), Expect = 8e-98, Method: Composition-based stats. Identities = 130/362 (35%), Positives = 203/362 (56%), Gaps = 3/362 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS ++ D TE PT ++ A+ EG++ R+ +L + L +L + SL G+L Sbjct: 1 MSGKNKDATEEPTAKKVRDAKREGRMARTPDLGTWLGILGATWTLPMTLTSLLDIGQGLL 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 F + +P L + + + + LA+LPL +++ L++ + G L S K Sbjct: 61 KKAAGFMAAP--EPALAVAIVKDGVLDGALAVLPLSLTIIVATLVAAGLQGTLRMSTKQF 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PKF++LNPL GIK MF + E LK ++KT L+ + + P ++ S Sbjct: 119 KPKFTQLNPLKGIKNMFGPHSLWEALKTLIKTSLLAGLLYVSVSGLVPSVVASGTLSLAA 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A L +G + M D K+L+M++Q+++DE KQSEGDP +K Sbjct: 179 LTDVATGTAMSLLRLAAIGGLVMAVVDYAVAKRRIHKELKMTKQEVKDEHKQSEGDPQLK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G IR Q +R RMMA+VP ADV++ NPTH +VAL+YD + AP+VVAKGAG +A +I Sbjct: 239 GAIRSKQMQMSRNRMMAEVPNADVVLVNPTHIAVALRYDPAR-GAPRVVAKGAGAIATKI 297 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 RE+ E+ VP ++ PLARAL++ E+G +IP +++ VA+VLA++ +LKR A G Sbjct: 298 RELATEHRVPIVQDVPLARALHKACEVGHEIPFEMFGPVAQVLAFLHRLKRKGSAAGTHR 357 Query: 361 VQ 362 +Q Sbjct: 358 MQ 359 >UniRef50_B6AMB2 Flagellar biosynthesis protein, FlhB n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AMB2_9BACT Length = 362 Score = 359 bits (923), Expect = 8e-98, Method: Composition-based stats. Identities = 133/353 (37%), Positives = 202/353 (57%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+DE + K E PT +LEKAREEGQ+ RSRE+ SL LL + + G ++ L + Sbjct: 1 MADEFEQKQEEPTARKLEKAREEGQVARSREVGSLFFLLAALLLFGSVGHTVVVGLENQM 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 G SI P+ I + ++ + PL G + ++++ + G V+S K+L Sbjct: 61 EQGFVEAPSIRLTPDSIGPYLGKILWNTLKTGFPLWGGFLAASILAFLFQGPPVWSVKAL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK+ +++P+ G+ R+FS ++ EL K ++K +LV V + L W ++ L A Sbjct: 121 VPKWERVSPVKGMGRLFSGRSLIELAKYLVKVLLVMFVVLWSLRGDWERLPALQAAGVHR 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 G + ++ + + D Q + LRM+R +IR+EFK++EGDPHV+ Sbjct: 181 FFGALTGFLRDALYRLIPLFVVIAILDFLLQRIQLNRSLRMTRSEIREEFKETEGDPHVR 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIR +QRA ARRRMMA V A V+V NPTH++VA++Y+ M+AP VVAKG VAL I Sbjct: 241 SRIRSIQRAMARRRMMAKVKTATVVVTNPTHFAVAIRYEPMTMAAPVVVAKGQDEVALNI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 R+I E VP +E PPLAR LY + ++IP + Y AVAE+L+ +++ W Sbjct: 301 RKIAREARVPVMENPPLARTLYAACPLDREIPVEFYQAVAEILSLLYERGHWE 353 >UniRef50_B6IQA2 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodospirillum centenum SW RepID=B6IQA2_RHOCS Length = 373 Score = 359 bits (923), Expect = 9e-98, Method: Composition-based stats. Identities = 130/374 (34%), Positives = 213/374 (56%), Gaps = 5/374 (1%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS+ E KTE PT +L++AR +G +P SRE++S++++L GV ++ G + L+ Sbjct: 1 MSERPEDSQKTEEPTQRKLDEARRKGDVPVSREVSSMMLVLAGVILVGGLGSWMGGHLTD 60 Query: 59 MLSAGLHFDHSI-INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 L + + P + L E L LLP + ++ L++ V G+VF+ Sbjct: 61 DLLPLVENPGDFPLQAPADAFRLLAWLAGEIGLVLLPAAAILLAAVLLAAVGQNGIVFTT 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 + L+PK +++P+ G++R+ S +T E LK + K VG+ L +M L Sbjct: 121 ERLKPKLERISPIAGLRRLVSLRTLVEFLKGLAKVAAVGAALLVVLEPELHRMEALALTD 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 ++ + ++ I + D+ +Q FS ++ RM+ Q++++EF+Q+EGDP Sbjct: 181 VAALPELLTSVLTRLLVATLIASIAIALLDLVWQQFSWRRQQRMTLQELKEEFRQAEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 HVK RI Q++R AR+RM +D+P+A V++ NPTH++VAL+YD ++ AP +AKG LVA Sbjct: 241 HVKARISQLRRERARQRMFSDIPRATVVITNPTHFAVALRYDLSEAPAPVCLAKGMDLVA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 RIRE + VP +E PPLARAL++ EIG+++ + Y AVAEV+++V L+ + G Sbjct: 301 RRIREAAMGHKVPIVENPPLARALHKSVEIGEEVQPEHYMAVAEVISYVVGLQA--RSQG 358 Query: 358 QRPVQPTHLPVPEA 371 P P VP A Sbjct: 359 AAPTPPGQPGVPPA 372 >UniRef50_B2TLW3 Flagellar biosynthetic protein FliR/FlhB n=6 Tax=Clostridium RepID=B2TLW3_CLOBB Length = 613 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 115/349 (32%), Positives = 195/349 (55%), Gaps = 1/349 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +D+KTE TP + ++++GQ+ RS++++ + + + SL G+L+ L Sbjct: 264 ADEKTEEATPKKKSDSKKKGQMARSKDVSVAITMAACTLAVSMLWGSLVDTFKGVLTYFL 323 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F + + I + + LP +++ + S ++ G + +G+ L+P Sbjct: 324 VFPSLKDFNELTAMSLISFSLLKVATVFLPFALAIMIAGVASSIIQTGFLITGEPLKPSL 383 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 K+NPL G+K MFS ++ L+K ++ ++ + ++ +++ ++ + + Sbjct: 384 GKINPLKGLKNMFSKRSLVGLIKNVVVVTIISILAYKYVKNNYVDIINISNLYLPSLGDE 443 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +LV + L ++ + D F Q H K+L+M++Q+I+DE+KQ+EGDP +K +I+ Sbjct: 444 IKNLVIGIFKQITLALVIIGATDYFVQFRLHNKELKMTKQEIKDEYKQAEGDPQLKAKIK 503 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDE-NKMSAPKVVAKGAGLVALRIREI 303 Q QR RRMM V A V++ NPTH ++AL+Y+E M APKVVAKGA VALR++ I Sbjct: 504 QKQREMGMRRMMQSVSDATVVITNPTHLAIALKYEEGGNMEAPKVVAKGADNVALRLKTI 563 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 +N+VP +E PLAR +Y EI Q IP LY VAEVLA V +LK+ Sbjct: 564 AKDNDVPIVENKPLARLMYDRVEIDQDIPQDLYQGVAEVLAIVLKLKKK 612 >UniRef50_C2KYZ7 Flagellar biosynthesis protein FlhB n=1 Tax=Oribacterium sinus F0268 RepID=C2KYZ7_9FIRM Length = 361 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 117/354 (33%), Positives = 201/354 (56%), Gaps = 7/354 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D DKTEAP+ + AR+EG + +SR++ ++ +L + F + + L L Sbjct: 1 MAD--GDKTEAPSEKKRSDARKEGNVFQSRDIVTVAVLFGVFYAVRFMMPFIYKDLRNFL 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLI-REAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 S L ++++P+ I ++ L + + +PL+ V + +I+ ++ S K Sbjct: 59 SYIL----ELLDEPSPISNKLYLRFTWLFVKSAMPLLLVTVFLGVIASLVQTRFNISFKL 114 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L PKFSKLNP+ G+ R+FS + ELLK ILK I++ + + + +++ Sbjct: 115 LTPKFSKLNPMQGLGRIFSKKNVVELLKNILKIIILINFLYSIIKADIIPIAKMVHMDIQ 174 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + + ++ V + + FD +Q + + L+M++Q+++DE+K EG+P + Sbjct: 175 NSSLALVSMMFDLITRVCGVFLIIALFDFMYQKWEYENNLKMTKQEVKDEYKMLEGNPEI 234 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGR++Q RA A +RMM VP ADVI+ NP H ++A++YD +K +AP V+AKG +ALR Sbjct: 235 KGRMKQQMRARANQRMMQQVPDADVIIRNPEHLAIAIKYDPDKNTAPVVLAKGQDELALR 294 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 I +G N V +E PLARA+Y +G++IPG Y AVAE+L +++Q + + Sbjct: 295 IVAVGEANGVTAIENKPLARAMYPLCHVGKEIPGDFYGAVAEILVYIYQKENRQ 348 >UniRef50_C8WBS8 Type III secretion exporter n=3 Tax=Zymomonas mobilis RepID=C8WBS8_ZYMMN Length = 380 Score = 357 bits (916), Expect = 5e-97, Method: Composition-based stats. Identities = 128/379 (33%), Positives = 201/379 (53%), Gaps = 9/379 (2%) Query: 1 MSD---ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M+D + D KTEAPT RL + E+G + +S+EL +L ++ + L Sbjct: 1 MADSDVDQDQKTEAPTQKRLREVAEKGDVLQSKELGIAFAMLASLAWFLMISHRMVYDLG 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 ML GL FD + + + I LI +L L + A+ +P +LG L F Sbjct: 61 IMLKMGLSFDFNAFSKFDP-FSVFIRLITCIILPFSMLFVLMAFAAIAAPAVLGSLGFRW 119 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 ++L K +LNP+ G R+F Q EL K+I+K +L+GS+ + LW P +M+L Sbjct: 120 EALNFKPERLNPIAGFSRVFGMQGLFELGKSIVKVLLIGSLGLWILWQRLPVIMQLGRHD 179 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 A+ + + L++ + + + DV QIF ++LRMS+Q+I+DE KQ+EG P Sbjct: 180 LKAAINEIGHIFLILVLVMSVALAVVAAIDVPIQIFRRNRRLRMSKQEIKDEHKQTEGSP 239 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K +RQ Q A R V + V++ NPTH++VAL+Y + AP V AKG +A Sbjct: 240 EIKAAVRQRQIAVFRASNRKAVQDSTVVITNPTHFAVALKYKAGEDIAPIVTAKGIDELA 299 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 L +RE+ E++VP L P LARA+Y + G+ I +LY AVA +LA++++L G Sbjct: 300 LALREMADESDVPVLHYPLLARAIYFTSNSGELIREELYKAVASILAFIFRLNA-----G 354 Query: 358 QRPVQPTHLPVPEALDFIN 376 + + + VPE + F Sbjct: 355 EEGLTLPVIDVPEEVRFDE 373 >UniRef50_B3PPK9 Flagellar biosynthesis transmembrane protein n=15 Tax=Proteobacteria RepID=B3PPK9_RHIE6 Length = 373 Score = 356 bits (915), Expect = 6e-97, Method: Composition-based stats. Identities = 109/347 (31%), Positives = 180/347 (51%), Gaps = 1/347 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 D+ D KTEAPT + A E+G +P SREL+ +L + F R+S L Sbjct: 17 DDDKDSKTEAPTAKKQTDAAEKGNVPFSRELSIFATILATFIYLVFFLPENVGRMSETLR 76 Query: 62 AGLHF-DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 D I IL + L + L P +++ + S + + + Sbjct: 77 DIFEQPDQWKIETGPDILALFVRLGWASAALLAPAFILLMVFGIASSIFQNLPTPVLERI 136 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +P+ S+++P+ G R+FS E K++ K ++VG + F L + + M P T Sbjct: 137 RPQASRISPVKGWSRLFSLPGLIEFGKSLFKVVVVGVILFFVLRSEYFGSIDAMFSDPQT 196 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + M + +++++ + D F+ +L+M+R ++++E KQ++GDP VK Sbjct: 197 ILVRMMTAMRKIIIVMLIATAIVAIADFFWTRHHWFTELKMTRHEVKEENKQAQGDPFVK 256 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R R + R ARRRM+A+V +A +++ NPTHY+VAL+Y + AP V+AKG L+AL+I Sbjct: 257 SRQRSLMRDRARRRMIANVHRATLVIANPTHYAVALRYAREENDAPVVLAKGQDLIALKI 316 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW 347 REI +N +P E PPLAR+++ + IP Y AVAE++ V+ Sbjct: 317 REIAEQNGIPVFEDPPLARSMFAQVSVDSVIPSVFYKAVAELIHRVY 363 >UniRef50_C4XT81 Flagellar biosynthetic protein FlhB n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XT81_DESMR Length = 357 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 118/356 (33%), Positives = 195/356 (54%), Gaps = 3/356 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ + KTE TP R KARE+G +PRS+EL L +L+ G+ + F ++ +L + Sbjct: 1 MARDP-SKTEKATPKRESKAREKGSVPRSQELPKLTVLMAGLFTVRFTLGNINEQLQEVF 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L + + + L + + LLPL+ + +VA ++ + G V+ K Sbjct: 60 RTFLGGRLDFTATTDDVAALMWSLSAKLAIMLLPLLLVMAVVAFVTQRLQVGEVWRPKIF 119 Query: 121 QPKFSKL-NPLPGIKRMF-SAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +P FS + NP+ G++R+ SAQT L K + V L + + + L +S Sbjct: 120 EPDFSNIVNPMRGLQRLLISAQTLVNLAKQTAMAFAISLVPYLILRKRFNEFLPLFYQSV 179 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 +D L +L + + DV++ + + + L+M++ +++DE KQS GDPH Sbjct: 180 DNIALFLLDNGFDMVLYTLLPMFVIAILDVWYTRWDYAENLKMTKDEVKDEHKQSFGDPH 239 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK + ++ +RRM+ DVPKADV++ NPTH + AL+Y+ + AP ++AKGA +A Sbjct: 240 VKQQQKRKMMEVMQRRMLQDVPKADVVITNPTHIACALRYNPLESPAPMLLAKGADFMAE 299 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 +I++I E+ VP E PLA+ALY++ EIGQ IP LY AVA +LA + + +R+ Sbjct: 300 KIKDIAKEHKVPIRENKPLAQALYKNVEIGQVIPEDLYQAVASILAQLDKFRRFNR 355 >UniRef50_B8H3H7 Flagellar biosynthesis protein FlhB n=6 Tax=Caulobacteraceae RepID=B8H3H7_CAUCN Length = 361 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 122/353 (34%), Positives = 201/353 (56%), Gaps = 2/353 (0%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+D++D KTE P+ +L AR +G + +S ++ L L VSVI G L R L Sbjct: 1 MADDTDPESKTEEPSAKKLSDARAKGDVIKSADIPQLASLAGAVSVILLAGGWLTRDLMA 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 L+ + +I + + + A+ AL+ ++ + + G + + + Sbjct: 61 ALTPFIAHAGTIDLSSGGAMIVLKQALLAALPALVLVMVVTAFAGAAAHIAQTGFLLTPE 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 ++P F KL+ + G+ R+F + LK+ +K +L G + F L H ++ L+ P Sbjct: 121 KIKPDFQKLDLIKGLGRIFGPDGMVQFLKSAVKFLLTGVIAYFVLKPHVGEVRNLVGMDP 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + AM L + V+L ++ FD F+Q + ++RM+ Q++++EFKQS+GDPH Sbjct: 181 AAMIPEAMKLSKGLLIAVILLLVATSAFDYFWQRMRFMNRMRMTLQEVKEEFKQSDGDPH 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +KG+ RQ+Q +R+RMM VPKA V+V NPTHY+VAL+Y++ + AP VAKG +AL Sbjct: 241 IKGKRRQIQMQRSRQRMMQAVPKATVVVMNPTHYAVALKYEQGETPAPLCVAKGVDDLAL 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +IR + E+ VP LE PPLARALY EI ++IP + + AVA+V++++ K+ Sbjct: 301 KIRAVAEEHGVPVLEDPPLARALYASVEIDEEIPVEHFEAVAKVISFILNGKK 353 >UniRef50_C2KTQ0 Flagellar biosynthesis protein FlhB n=3 Tax=Mobiluncus RepID=C2KTQ0_9ACTO Length = 373 Score = 354 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 134/365 (36%), Positives = 200/365 (54%), Gaps = 9/365 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD S +KTE TPH L+K RE+G + +S++LT + L G +++ SL Sbjct: 1 MSD-SGEKTEKATPHHLKKVREDGGLQKSQDLTGWISLAAGAALL----PSLMDTAGHNG 55 Query: 61 SAGLHFDHSIINDPNL--ILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVF-SG 117 + ++N ++ ILG + ++ + LLP + ++LVA++ ++ G VF S Sbjct: 56 REQIAAVRELVNGVSMTEILGFLGQSLQGVLWTLLPFMLAIMLVAVLVNIIQGKGVFPSA 115 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 K L+PK LN + G+K++ Q LKA+LKT+ VG V + M S Sbjct: 116 KHLKPKLQNLNLVKGVKKIAGVQALWNGLKALLKTVAVGVVLYLIISGVMEIMGAAGHMS 175 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + D + L V+ I + D F + K+ +MS+Q++++E+KQ EGDP Sbjct: 176 GRDLVNYGTDKMWLLIWASVIAGIVVSILDALFIFKKNQKQTKMSKQEVKEEYKQQEGDP 235 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K + R +R RMM D +ADV+V NPTHY+VAL+Y+ + APKVVAKG +A Sbjct: 236 QIKSQRRSRALQMSRNRMMNDAAEADVVVVNPTHYAVALKYEPGQ-GAPKVVAKGVDHLA 294 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 RIREI +N VP +E LAR LY AEIG +IP +LY AVA+VLA+ LK+ GG Sbjct: 295 SRIREIALDNRVPMVEDVALARTLYSTAEIGVEIPEELYTAVAQVLAFCLLLKKRGARGG 354 Query: 358 QRPVQ 362 + Sbjct: 355 IHKMP 359 >UniRef50_Q0FML8 Flagellar biosynthesis protein B n=4 Tax=Rhodobacteraceae RepID=Q0FML8_9RHOB Length = 375 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 117/359 (32%), Positives = 203/359 (56%), Gaps = 8/359 (2%) Query: 1 MSDESDDK---TEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M+D+ +DK TE PT +L KARE+G + S+E +++ +L ++ F S++ L+ Sbjct: 1 MADQDEDKDNKTEEPTERKLRKAREKGDVASSKEAGNVMAVLSLFAITAFVLPSVSAPLA 60 Query: 58 GMLSAGLHFDHSIINDPNL-----ILGQIILLIREAMLALLPLISGVVLVALISPVMLGG 112 G+ L + +L + ++R + L PL++ +V+ AL + G Sbjct: 61 GVFRNVLESAGQVHVGTDLSGLRDLGAVSWKVLRGVGILLGPLMALMVIGALAGVALQGE 120 Query: 113 LVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMR 172 +V + + L+PK+SK++P+ G KR+FS E K++ K +LVG + G+ + + Q+ + Sbjct: 121 VVVASERLKPKWSKISPISGFKRLFSLAAFVEFFKSVTKVLLVGVIAGWVVLNAVGQIWQ 180 Query: 173 LMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQ 232 P L+ + V + D+ ++ F H +K RMS ++I+DE K+ Sbjct: 181 TQGLVPEMVTDFIRAEAARMLLITLALVSVIAVADILWKRFDHRRKQRMSMKEIKDEVKE 240 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 +EGDP ++ + ++R AR+R+ VP+A V++ NPTH++VAL+Y+ AP VAKG Sbjct: 241 TEGDPLIRSKRMNIRRERARQRLAQAVPRATVVLTNPTHFAVALKYENGVDMAPVCVAKG 300 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 A L+A RIRE+ EN +P +E PLARAL+ AE+ + IP + + AVA ++ ++ L+R Sbjct: 301 ADLLAARIRELAKENEIPMVENRPLARALHDVAELDRPIPVEHWEAVAAIIGYIMDLER 359 >UniRef50_A8EW41 Flagellar biosynthetic protein FlhB n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EW41_ARCB4 Length = 349 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 122/353 (34%), Positives = 200/353 (56%), Gaps = 4/353 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D+ ++KTE PT +LE A+ EG + +S E+ IL G + F S + ++ Sbjct: 1 MADD-EEKTEEPTSKKLEDAKNEGNVSKSMEVVGASILTFGSIFLLFFSGSSMLEIKKLM 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 +F ++ P L ++ + AL PL V+L+ L+ G + L Sbjct: 60 MLSYNFIGQEMDGP-LYYAITYTVVITLLKALAPLFILVILLGLVGNWAQFGFI--SIPL 116 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + KL+P+ G+K +F + E LK LK ++ +V + + + +M + + Sbjct: 117 KFDLQKLDPIKGLKNIFGLKKLLEALKLSLKLAIIITVMFIIFSLTYNEFLAMMNKETMA 176 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + L ++ +I D +F + ++K L+MS+Q+I+DE+K EGDP VK Sbjct: 177 TISSMLQLTIYFIFTILFIIIIFAIMDFYFSKYYYMKSLKMSKQEIKDEYKNMEGDPQVK 236 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GRIR++Q A++RMM +VP ADV++ NPTHY+VAL+YD SAP +VAKG +AL+I Sbjct: 237 GRIRRIQMQMAQKRMMGNVPNADVVITNPTHYAVALKYDNKVNSAPVLVAKGIDFLALKI 296 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 ++I ENNV +E P LARALY E+ ++IP Q Y A+AE+ +++++LKR R Sbjct: 297 KDIAKENNVTIIENPALARALYDQIEVDKEIPNQFYKAIAEIFSYLYELKRKR 349 >UniRef50_UPI0001744A09 Type III secretory pathway, component EscU n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744A09 Length = 347 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 104/347 (29%), Positives = 192/347 (55%), Gaps = 2/347 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +K E PTP +L AR++GQ+ +S+++ + + + I S+ + ++ + + Sbjct: 3 EKNEPPTPKKLRDARKKGQVAKSQDVGTAALTIASFVTIGIMWPSMVEQAKELILLPVQY 62 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 ++ ++ + R+ +L LP++ V++V L + G + + + L+P+ K Sbjct: 63 YDKPFQQGSM--ELMLAIGRKVLLMSLPILMVVMVVGLAAGFGQIGFMLTFEPLKPELKK 120 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LNP+ K++FS ++ ELLK+ +K ++G + + + RL + + Sbjct: 121 LNPMDKAKQIFSMKSLVELLKSTIKVGVIGIIIYYVTKASLDPLTRLPYGGEESVLTALQ 180 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 ++ + VV+ I + D FFQ + H+K+L+MS+ +++ E+K+SEG+P +KG+ +Q+ Sbjct: 181 PMIKALTMNVVMAYIIIAAADFFFQKYQHIKQLKMSKDEVKREYKESEGNPEIKGKRKQL 240 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 + AA+ M KA V+V NPTH ++A+ YDEN P+V+AKG VA R+ E+ E Sbjct: 241 AQEAAQSDTMGRTRKASVVVTNPTHLAIAIYYDENDDKMPRVLAKGEDHVARRMVEVARE 300 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +P ++ PLARALY + +I + +P L +AEVL WV + K R Sbjct: 301 EGIPVMQHVPLARALYENVDIDRFVPSDLIEPMAEVLRWVQEWKELR 347 >UniRef50_A4Y0Q6 Flagellar biosynthetic protein FlhB n=1 Tax=Pseudomonas mendocina ymp RepID=A4Y0Q6_PSEMY Length = 377 Score = 354 bits (908), Expect = 4e-96, Method: Composition-based stats. Identities = 135/374 (36%), Positives = 220/374 (58%), Gaps = 3/374 (0%) Query: 1 MSDES--DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS+++ +KTE + H+L+K++E+GQ+ RS++L++ + LL + ++ F LS Sbjct: 1 MSEQNSGQEKTEEASAHKLKKSKEDGQVARSKDLSTTISLLATLFILKFSAGLFLEGLSD 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + + + + L P++ VLV +S ++ GG VFS K Sbjct: 61 SFRLSYIQFGHSEIGLDDLDTLLGYNMLVFIKLLAPMLLTSVLVVALS-LVPGGWVFSAK 119 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + PK SKLNP+ G+ R+FSAQ +ELLK++LK +++ V + P+++ L S Sbjct: 120 NFAPKLSKLNPITGLGRIFSAQNWSELLKSVLKVLVLLGVGYVLVRAALPELIALQRSSV 179 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + A+ A++L L ++L + D+ Q + LKK+RM++Q+ ++E K EG P Sbjct: 180 VQAISAALNLTFNLILCLMLVFVLFSFIDIPLQRYFFLKKMRMTKQERKEEHKNQEGRPE 239 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK RI+Q+QR +R++ + ADVI+ NPTHY+VAL+YD K +AP V+AKG AL Sbjct: 240 VKARIKQLQRQMLQRQISKVIKNADVIIVNPTHYAVALKYDSKKAAAPFVLAKGVDETAL 299 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +R++ ++ + LE PPLARA+Y +I QQIP LY AVA VL ++ QLK WR Sbjct: 300 YMRQMAKKHELEVLEIPPLARAIYFTTQINQQIPAPLYTAVAHVLTYILQLKAWRQGRRS 359 Query: 359 RPVQPTHLPVPEAL 372 +P ++LP+P++L Sbjct: 360 KPQLASNLPIPDSL 373 >UniRef50_A8IPK5 Flagellar biosynthetic protein n=14 Tax=Alphaproteobacteria RepID=A8IPK5_AZOC5 Length = 359 Score = 353 bits (906), Expect = 7e-96, Method: Composition-based stats. Identities = 119/354 (33%), Positives = 190/354 (53%), Gaps = 9/354 (2%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVS----LAR 54 MSD++D KTE T ++ A E+G +P SRE LL + V+ F V+ L Sbjct: 1 MSDDTDKESKTEEATERKVSDALEKGNVPYSRETALFASLLGILGVLTFFVVNPVRILTV 60 Query: 55 RLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLV 114 L+ L F + +D + ++LL+ + +L + + L + + Sbjct: 61 ELTHFLDNPAGFTLAGSDDAIALAWGVLLLMGQVLLPAV---LLLAAAGLAASLFQNTPR 117 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 +QP+FS+++P+ G R+FS G E K+ K ++V + G L ++M M Sbjct: 118 LVLNRIQPQFSRIDPMKGWTRIFSRDGGIEFGKSAFKLVVVAVICGVLLMSERDKVMNAM 177 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 P+ + L V + I +V D+ + F +LRM++Q++++E KQ E Sbjct: 178 YSDPLLMPSVILSLATRLISAVCVATIVLVALDLVWSRFHWRAELRMTKQEVKEEMKQQE 237 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDP VK R+R + + AR+RMM+ VPKA ++V NPTHY++AL YD K AP+VVAKG Sbjct: 238 GDPMVKARMRSLAQQRARQRMMSSVPKATLVVANPTHYAIALYYDRQKGGAPQVVAKGTD 297 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 L+AL+IREI ++P +E PLARA+Y E+ Q IP + Y VA++L +++ Sbjct: 298 LIALKIREIAERCSIPVIEDKPLARAMYDAVEVDQWIPPEFYKPVAKILYFIYS 351 >UniRef50_A5V2R9 Type III secretion exporter n=2 Tax=Sphingomonadaceae RepID=A5V2R9_SPHWW Length = 379 Score = 352 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 141/379 (37%), Positives = 210/379 (55%), Gaps = 7/379 (1%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ E D+KTEAPTP R + A E+G + +SREL + L+++VG I G L Sbjct: 1 MAEGPEDDEKTEAPTPKRRQDAAEKGDVLQSRELGTALVMVVGAGWIAIAGPWAMAALKR 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 MLS L FD I + + L + ++ L LL L + + A+ +P MLG L F Sbjct: 61 MLSNALSFDAGAIENFDP-LSAALAMVATVALPLLLLFALTLAAAIAAPAMLGSLGFRWS 119 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +L K +KLNP+ G+KR+F Q EL K++LK + +G+V + L ++ + + Sbjct: 120 ALGFKANKLNPMAGLKRIFGMQGLIELGKSLLKILALGAVGYWLLMDRIAAIVTMGQQDL 179 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 TA+ + L++ L + + G DV Q+F K+LRMS+Q+I++E KQ+EG P Sbjct: 180 RTALDSLGSTFVFAVLVMTLALAVVAGADVPMQMFQRGKRLRMSKQEIKEESKQTEGSPE 239 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K IRQ Q AAA V +A V++ NPTH++VAL+Y +AP V+A+G G A Sbjct: 240 LKAAIRQKQMAAAMGSARKAVVEATVVLTNPTHFAVALRYRPGFDTAPVVLARGRGATAQ 299 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 IRE+ EN+VP L P L RA+Y + GQ I L+ AVA +LA+V+ L R G Sbjct: 300 AIRELATENSVPMLHYPQLTRAIYYTSRSGQVIREDLFIAVAAILAFVFNLDRAMAEGIA 359 Query: 359 RPVQPTHLPVPEALDFINE 377 +P + VP+ F E Sbjct: 360 QPE----VDVPQGARFDEE 374 >UniRef50_Q89AN6 Flagellar biosynthetic protein flhB n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=FLHB_BUCBP Length = 382 Score = 350 bits (900), Expect = 3e-95, Method: Composition-based stats. Identities = 127/373 (34%), Positives = 227/373 (60%), Gaps = 1/373 (0%) Query: 1 MS-DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+ DES++KTE+PT +RL+ ++E G REL SLLIL + + W+ + L + Sbjct: 1 MNHDESEEKTESPTSYRLKISKETGHNRYYRELYSLLILTITLINFWYNQRLILTLLKRI 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 F++SI + + +++ ++ +++LL +I +L+ + ++L F+ K Sbjct: 61 FYLSFTFNNSIFQNDLFLDHNFLMIFQDNLISLLGIIFFPMLIFMFPAMILCCSNFNFKF 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++ +KLNP+ G K +FS ++ +L K +LK + V V F+ ++ ++ + Sbjct: 121 IKFDINKLNPILGFKNVFSIKSIVDLFKTVLKIVFVSIVVYLFISKYFLKVCFSSNFTFD 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + ++ + LC L +++ IP++ D+F++ ++ + LRM+R+++ DE K EG+P + Sbjct: 181 YILNYSVRTIFLCFLTILIFFIPIIIIDLFWEKYNFYRSLRMTRKEVSDELKNMEGNPRI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RIRQ+ + + RRM+++V K+DVIV NP HY++A++Y+E M APK++AKG +A++ Sbjct: 241 KSRIRQIMFSISNRRMLSNVSKSDVIVVNPMHYAIAIKYNETNMYAPKILAKGIDELAIK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I++IG +++PTL + LA LY E+G+ IP LY AVAEVLAWVW+++ W++ GG Sbjct: 301 IKKIGNNHSIPTLVSHSLAHVLYYRTEVGEYIPSVLYEAVAEVLAWVWKIRHWKIKGGVF 360 Query: 360 PVQPTHLPVPEAL 372 P P +P L Sbjct: 361 PRTPEKFFIPSEL 373 >UniRef50_C6HWM0 Flagellar biosynthetic protein FlhB n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWM0_9BACT Length = 365 Score = 350 bits (900), Expect = 3e-95, Method: Composition-based stats. Identities = 131/366 (35%), Positives = 202/366 (55%), Gaps = 8/366 (2%) Query: 1 MSD---ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M+D + + E PT RLEKAREEGQ+ RSRE+ L + ++ G L L Sbjct: 1 MADNENDGQLRQEEPTSRRLEKAREEGQVARSREVGYFFFLAASLILMASYGSRLVEGLR 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 +S L I P+ I + L+ M PL+ G ++ + + ++ GG++ S Sbjct: 61 DDMSYYLRHSGEISLTPDGITPFVKGLVLHEMGRTFPLLGGFLVFGVAAYIVQGGILVSP 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 K+ K+++++P GIKR+FS + ELL+ +K ++ + + L W + LM Sbjct: 121 KAAAIKWNRVSPSQGIKRLFSWRALEELLRYTIKVVVSLLILFYALKQDWMTLPALMETG 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 +G + + + + D FQ F ++ LRM+R +I++E K++EGDP Sbjct: 181 AHRMVGALYHFTFVVLVSFLPLYAALAIGDYLFQRFMMMRGLRMTRTEIKEETKETEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 HV+ RIR +QRA ARRRMM+ + A V++ NPTH++V L+Y M+AP VVAKGA VA Sbjct: 241 HVRARIRSIQRAMARRRMMSKIKDATVVITNPTHFAVVLKYHPESMAAPVVVAKGADEVA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 RIREI E VP +E PP AR L+R + ++IP Y AVA +L+ ++Q +GG Sbjct: 301 FRIREIAREVGVPVVEDPPTARGLFRECPLDREIPFTFYEAVARILSILYQ-----RSGG 355 Query: 358 QRPVQP 363 Q P++P Sbjct: 356 QVPLRP 361 >UniRef50_C9NX90 Type III secretion inner membrane protein HrpY n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NX90_9VIBR Length = 350 Score = 350 bits (900), Expect = 4e-95, Method: Composition-based stats. Identities = 99/344 (28%), Positives = 174/344 (50%), Gaps = 4/344 (1%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL-H 65 +KTE PT RL AR++GQ+ +S E+ + + V + G + + M+ + Sbjct: 3 EKTEKPTQKRLRDARKKGQVIKSNEIVTGFQMAVILGYFIIEGQGMMEAIWKMIDLAITS 62 Query: 66 FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFS 125 D + ++ + ++ + L+ +V+ S ++ G V++ +SL+P F+ Sbjct: 63 IDLPLKVAAETVVAAFVYILIRF---IAGLVFILVITVAFSCMVQTGPVWASESLKPSFN 119 Query: 126 KLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNA 185 K+N + K +FS ++ EL K +LK +++ V + L H L + Sbjct: 120 KVNVINNAKNIFSMKSLFELCKNMLKILVLSLVFYYLLHQHVNMFQYLPTCGVDCGVEII 179 Query: 186 MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQ 245 L+ ++ + D F F +K+L+MS++D + E+K++EG+P VK + R+ Sbjct: 180 FTLIKWLWGAFLVCYLVFSVGDYAFVHFQTMKQLKMSKEDTKQEYKETEGNPEVKQKRRE 239 Query: 246 MQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGA 305 +QR A ++++V K+ VIV NPTH +V L Y + P V+ K +AL + E+ Sbjct: 240 LQRETANGSLVSNVKKSTVIVRNPTHIAVCLYYQPGETPLPLVLDKAQEHMALHVVEMAE 299 Query: 306 ENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 ++ VP +E PLARALY E GQ IP L+ VAE+L V + Sbjct: 300 KHEVPLVENIPLARALYHQVEPGQVIPESLFEPVAELLRVVMNV 343 >UniRef50_A1TJC2 Type III secretion protein, YscU/HrpY family n=5 Tax=Acidovorax RepID=A1TJC2_ACIAC Length = 352 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 111/353 (31%), Positives = 188/353 (53%), Gaps = 4/353 (1%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT +L+ AR++GQ +S++L + +L + V+ G L R+ +++ L Sbjct: 3 EKTEEPTAKKLKDARKKGQTTKSQDLVAGAVLGAALLVLTGAGPMLYDRVRRIVTTALEQ 62 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 ++ +L + + + M ++ VLVA+++ + G + + + L PKF Sbjct: 63 -GVRVHSTQELLALLSSMALDGMAVAFGMVIVSVLVAVLALLPQVGFMITFEPLTPKFDS 121 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LNP G+K+MF+A++ E K++LK ++ G+V + P ++ + +P + A Sbjct: 122 LNPAEGLKKMFNARSLVEFAKSVLKAVVFGAVLWHIVTGLVPLLVGSVYLTPEASGQIAW 181 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 + L + + D Q + ++ RMS+ D++ E K SEGDPH+KG ++ + Sbjct: 182 SALLKLFSFAFLVFLVIGPLDFGLQHWLFMRDQRMSKDDVKRENKDSEGDPHLKGHLKSL 241 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 + A VP A V+V NPTHY+VAL+Y+ P VVAKG A IR + A Sbjct: 242 REEMATSPPQERVPGATVVVTNPTHYAVALRYEAGATPLPIVVAKGMDEQAAVIRGLAAL 301 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 +++P + PPLARAL++ + Q IP +L+ AV+ VL WV +L RL GG Sbjct: 302 HHIPLIANPPLARALHK-LPLDQPIPEELFEAVSVVLRWVAELD--RLGGGSP 351 >UniRef50_Q0G102 Flagellar biosynthesis protein B n=3 Tax=Rhizobiales RepID=Q0G102_9RHIZ Length = 362 Score = 349 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 112/350 (32%), Positives = 184/350 (52%), Gaps = 7/350 (2%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWF----GGVSLARRLS 57 S++ KTE PT ++ E+G +P SRE L L I G L L Sbjct: 4 SEDRSQKTEQPTEKKIRDTIEKGNLPNSREAPVLASFLAISLFIALQARESGYRLLTTLQ 63 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 L ++ D L + +L EA + L+P+ + + +++ V+ + Sbjct: 64 TTFDNPLQWELETSRD---ALHVLSVLSTEAAIFLVPVAIFLCIGGILASVLQNPPQVNF 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 + ++PK S ++P G+KR+F + E KA+ K +++G V G + + M++ M Sbjct: 121 ERIKPKASNISPASGLKRIFGPRGLTEFAKAVFKFLMIGVVVGTLIVSNLGTMIQTMLAD 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 P+ +DL V + I +V D+ + + MS+Q+I+DE KQ++GDP Sbjct: 181 PVQVPELVLDLAMKLLSGVSIATIVLVAADIAMTRIHWRRDIMMSKQEIKDEHKQTDGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 VK R +Q+ R +R+RM+A VP A +++ NPTHY++AL+Y + AP VVAKG LVA Sbjct: 241 MVKQRQKQIARERSRKRMIAAVPNATLVIANPTHYAIALRYKREEGGAPMVVAKGTDLVA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW 347 L+IRE+ E +P +E LAR++Y H I Q IP + + AVAE++ ++ Sbjct: 301 LKIREVAEEKEIPVIEDKLLARSMYDHVHIDQMIPPEFFKAVAEIIYYLH 350 >UniRef50_O54243 Flagellar biosynthetic protein flhB n=46 Tax=Rhizobiales RepID=FLHB_RHIME Length = 360 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 114/350 (32%), Positives = 189/350 (54%), Gaps = 3/350 (0%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++E D KTEAP+ ++ A E+G +P SRE+T+ L + F A ++ Sbjct: 1 MAEEQDKDSKTEAPSEKKISDATEKGNVPFSREVTAFASTLAIYIFVVFFLSDGAANMAE 60 Query: 59 MLSAGLHFDHSI-INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 L + ++ + I ++ + +LP+ ++L + S + Sbjct: 61 ALKDIFEQPEAWRLDTATDAVALISHVVLKCAALVLPVFILLILFGVGSSIFQNLPRPVL 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 +QPK+++++P G KR++ Q E K++ K I+V V LW+ + + +M Sbjct: 121 DRIQPKWNRVSPAAGFKRIYGVQGLVEFGKSLFKIIVVSIVVVLVLWNDYFATLDMMFSD 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 P+T + + ++V+ + D+F+ +LRM+RQ+++DE KQS+GDP Sbjct: 181 PVTIFTTMISDLKQIIIVVLFATATLAIVDLFWTRHHWYTELRMTRQEVKDELKQSQGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 VK R+R MQR AR+RM++ VP+A +I+ NPTHY+VAL+Y + AP VVA G LVA Sbjct: 241 IVKSRLRSMQRDRARKRMISSVPRATLIIANPTHYAVALRYVREESDAPVVVAMGKDLVA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW 347 L+IREI +N +P E PPLAR+++ + IP Y AVAE++ V+ Sbjct: 301 LKIREIAEKNGIPVFEDPPLARSMFAQVSVDSVIPPVFYKAVAELIHRVY 350 >UniRef50_D2S977 Type III secretion exporter n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S977_9ACTO Length = 377 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 139/379 (36%), Positives = 207/379 (54%), Gaps = 14/379 (3%) Query: 1 MSDES--DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+ + +KTE PTP RL+KAR+EGQIPR++EL + VG + F L R Sbjct: 1 MAKDGPGGEKTEDPTPQRLKKARKEGQIPRTQELGTW----VGAAAASFLLPMLVRNAFD 56 Query: 59 MLSAGLHFDHSIINDPN--LILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFS 116 + A +++ P + + + + LP+ +++V + + GG+ S Sbjct: 57 QVGAMFVQVGAVVETPEVEAVTALLGQALDTFVTVALPMAVALMVVGVAASAAQGGVTVS 116 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 GK ++P KLNP PG+KRMF E KA++KT +G+V Q++ Sbjct: 117 GKPMKPTLKKLNPFPGMKRMFGGHGLWEATKAVIKTAALGTVV-VVTSDRAQQLVSSAGA 175 Query: 177 SPITAMGNAMDLVGLCALLVVLGV-IPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 P++A+ + + VV + + D +K+LRM++ +I+ E K SEG Sbjct: 176 LPLSAITATFTDSAVLMIRVVAVTGLVIAVADYVIVRKRTMKELRMTKYEIQQEHKNSEG 235 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DPHVK + R Q A +R RMMA+V ADV++ NPTH +VAL+Y+ ++ AP+VVAKGA Sbjct: 236 DPHVKAQRRATQMAMSRNRMMAEVADADVLLVNPTHVAVALKYEPDR-GAPRVVAKGADE 294 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 VA ++RE AE VP ++ PLARAL+ EIGQ++P QL+ AVA VLA+V QL + Sbjct: 295 VAAKLRERAAEARVPLVQDVPLARALHASCEIGQEVPAQLFTAVARVLAFVMQLSARGVR 354 Query: 356 GG-QRP--VQPTHLPVPEA 371 GG RP P +P A Sbjct: 355 GGFHRPGFAAPDVEDLPRA 373 >UniRef50_P69986 Yop proteins translocation protein U n=49 Tax=Gammaproteobacteria RepID=YSCU_YERPE Length = 354 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 94/344 (27%), Positives = 178/344 (51%), Gaps = 2/344 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PTP ++ AR++GQ+ +S+E+ S +++ +++ S ++ + Sbjct: 2 SGEKTEQPTPKKIRDARKKGQVAKSKEVVSTALIVALSAMLMGLSDYYFEHFSKLM--LI 59 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + S + + + ++ E PL++ L+A+ S V+ G + SG++++P Sbjct: 60 PAEQSYLPFSQALSYVVDNVLLEFFYLCFPLLTVAALMAIASHVVQYGFLISGEAIKPDI 119 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 K+NP+ G KR+FS ++ E LK+ILK +L+ + + + +++L Sbjct: 120 KKINPIEGAKRIFSIKSLVEFLKSILKVVLLSILIWIIIKGNLVTLLQLPTCGIECITPL 179 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 ++ ++ +G + + D F+ + ++K+L+MS+ +I+ E+K+ EG P +K + R Sbjct: 180 LGQILRQLMVICTVGFVVISIADYAFEYYQYIKELKMSKDEIKREYKEMEGSPEIKSKRR 239 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q + R M +V ++ V+V NPTH ++ + Y + P V K +R+I Sbjct: 240 QFHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIA 299 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 E VP L+ PLARALY A + IP + A AEVL W+ + Sbjct: 300 EEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLRWLER 343 >UniRef50_C8WYW8 Flagellar biosynthetic protein FlhB n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WYW8_DESRD Length = 354 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 208/351 (59%), Gaps = 2/351 (0%) Query: 1 MSDESDD-KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+ + D+ +TE PT R + REEG++ +S+E+ + L+L + + ++ + L Sbjct: 1 MAQQGDEERTEEPTEKRRREFREEGKVAQSKEVNTALLLSTALLLWFWYAPNFVEGLERF 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L+ P ++G + + L L P++ ++V +S + G +FS K+ Sbjct: 61 LAGFWDQAGYWNVTPQAVVGWLGKGLIHLGLLLSPILILSIVVGFLSSYIQFGWLFSPKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 LQP KL+P+ G + S ++ ELLK++ K +VGSV + L H+ Q ++L+ + Sbjct: 121 LQPDIKKLDPIQGAAKFVSKRSAMELLKSLAKVAVVGSVAYWTLSDHFEQAIQLIGQPIE 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 L + ++ + D + + ++++M++++++DE K++EGDP + Sbjct: 181 RIFVFIGWTAAEILLKCCIALLFIAVIDFAYTKWEMEEQMKMTKKELQDEHKETEGDPQL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K R+R +QR AR+RMMA+VP+ADV++ NPTHY+VAL+YD + M AP+V AKG+ +VA R Sbjct: 241 KQRMRSIQRDMARKRMMAEVPQADVVITNPTHYAVALRYDRSSMEAPEVTAKGSNIVAQR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 IREI E+ VP +E PP+AR L+ E+G+ +P +Y AVAE+LA+V+ LK Sbjct: 301 IREIAEESGVPLVENPPVARVLHG-LELGETVPESMYKAVAEILAYVYSLK 350 >UniRef50_A1SEN0 Type III secretion exporter n=1 Tax=Nocardioides sp. JS614 RepID=A1SEN0_NOCSJ Length = 381 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 128/368 (34%), Positives = 200/368 (54%), Gaps = 5/368 (1%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +K+E PT R ++ R+EGQ+PRS E+ + LL+ + +L + + Sbjct: 2 TGEKSEKPTAKRNKENRKEGQVPRSPEIGAWSALLLIAMFLPRLFGHEIDKLRELTTTM- 60 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F + D + + + + +L L+ L +G+ +V + + GG + KS++PK Sbjct: 61 -FSSAADADAEIAVQLLGQGLWHVLLVLVVLGAGIAVVGIAGALGQGGFFLATKSVKPKL 119 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 SKLNPLPG KR+F + E K ++++ +V + + P + LM S + + Sbjct: 120 SKLNPLPGFKRIFGPRALWEGTKMLIRSGIVALLVWLAVKSMLPLIGGLMPMSLV--LDQ 177 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 + + + + D Q KK RMS+ +++ E KQSEGDP +KG IR Sbjct: 178 FASHALSMIRNIAVAGVLLGAADYLVQRKLMGKKTRMSKDEVKQEHKQSEGDPLLKGAIR 237 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q AA+R RMMADVP ADV++ NPTH +VAL+Y+ + AP+VVA+GAG++A IRE Sbjct: 238 SRQLAASRNRMMADVPTADVVLVNPTHVAVALRYEPER-GAPRVVARGAGVIAAAIREKA 296 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQPT 364 E VP + PLARALY +GQ+IP +L+AAVA+VLA+V + GG+ + Sbjct: 297 TEARVPLVRDVPLARALYTSTTVGQEIPTELFAAVAQVLAFVLSRRAQGQHGGEHRTPRS 356 Query: 365 HLPVPEAL 372 +PE L Sbjct: 357 VDELPEVL 364 >UniRef50_A6W8L6 Type III secretion exporter n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8L6_KINRD Length = 360 Score = 346 bits (889), Expect = 6e-94, Method: Composition-based stats. Identities = 130/348 (37%), Positives = 191/348 (54%), Gaps = 7/348 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PTP +L++AR+EG IP SR++ + L G I +L Sbjct: 2 SGEKTEKPTPKKLKEARDEGNIPFSRDVAAWLSTGAGAVTI----PHTIESGQVLLRKAF 57 Query: 65 HFDHSIINDPNLILGQIILLIREAML--ALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 ++ DP L A + L PL + V ++S + G L + K L+P Sbjct: 58 AGVGAVAADPEPARALAALAATFAGIPGVLGPLAAATVFAVVVSGGVQGTLRPAPKKLKP 117 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 KFS LNP+ G K+ + Q E K++LKT+++G+V + + PQ + + + Sbjct: 118 KFSNLNPVNGFKQHWGPQALWEGTKSLLKTVVIGTVMWLVVKNLVPQFVGSGLMPLASVL 177 Query: 183 GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 V + VL + + D +KKLRMS+QDI+ E K +EGDP +KG Sbjct: 178 TLTKGAVVKIVAVTVLLGLIIAAGDYAMSYRRTMKKLRMSKQDIKMEHKNAEGDPLLKGA 237 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 IR Q A +R RMM+DV ADV++ NPTH +VAL+Y+ APKVVAKGAG +A +IRE Sbjct: 238 IRSKQMAMSRNRMMSDVASADVVLVNPTHIAVALRYEPG-TGAPKVVAKGAGAIASKIRE 296 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 EN+VP ++ LAR +Y+ +IGQ+IP + +AAVA+VLA+V L+ Sbjct: 297 KAKENDVPLVKDVQLARTMYKSCKIGQEIPPEFFAAVAKVLAFVMNLR 344 >UniRef50_A0P0L7 Translocation protein in type III secretion n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P0L7_9RHOB Length = 371 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 90/349 (25%), Positives = 171/349 (48%), Gaps = 3/349 (0%) Query: 1 MSDE-SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS + + +KTE PT +L AR++GQ+ RS++L + + LL ++ +W + M Sbjct: 1 MSQQPTGEKTEQPTHKKLRDARKKGQVARSQDLVTTISLLGVIAYLWLAWDYNFAKFVEM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L + + + +++ +LPL+ + + G +F+ ++ Sbjct: 61 LDIVAALHGAGFR--ASAFNALQAMFDISIVVVLPLLGVGFALGIAGNYFQFGSIFAFEN 118 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+PK ++P G+K++FS + E LK+++K I + + F + M + Sbjct: 119 LKPKIENISPAKGLKKIFSVKQLVEFLKSLIKIIFLSVLLFFVIRDAIGPYMNAVQCGLQ 178 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 ++ L L + GFD FQ F H K+L M++ +++ E+K++EGDP + Sbjct: 179 CLTAVTSSMLLTTLLFTALAFAIVSGFDFIFQKFQHKKELMMTKTEVQREYKETEGDPLI 238 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGR +Q+ + + A ++ NPTH++V + Y + P +VAKG L A Sbjct: 239 KGRRKQLAQEMVLSDGIDRTRNATAVIVNPTHFAVVIDYKPDIAPLPLIVAKGRNLHAHD 298 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 +R ++ VP LAR+LY +++G +P + + +A++L WV + Sbjct: 299 LRTEAEKHGVPVFRNVLLARSLYAESDVGAFVPDEWFEVIAKILVWVDK 347 >UniRef50_A1UTV9 Flagellar biosynthetic protein FlhB n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UTV9_BARBK Length = 356 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 118/354 (33%), Positives = 188/354 (53%), Gaps = 4/354 (1%) Query: 1 MSDESDDK---TEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 MSDE DK TE PT H++ KA E+G +P SREL L L+ + F LS Sbjct: 1 MSDEKPDKESQTEEPTEHKIHKAEEKGNLPFSRELPILASLMSFSLITIFVAFPAMSNLS 60 Query: 58 GMLSAGLHFDHSI-INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFS 116 L+ L S IN + I L+ LAL L+ + L+++ + + Sbjct: 61 RFLTEWLERPESWHINTAEDVKHLIYLVGGNLGLALAALLIIIPLISIAASAIQNAPRIV 120 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 + + PK+S+++P G R+F E LK+++K I V + + + + + Sbjct: 121 TERISPKWSRISPANGFGRIFGKAGFIEFLKSLVKLIGVSIIVYIMFFKNNTIFINALLT 180 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 + +L ++ V + GFD+ + F ++LRM++Q+++DE+K EG+ Sbjct: 181 DAPALPEYIRQKLVDLSLSFIVAVAIIAGFDLAWSRFYWRQQLRMTKQEVKDEYKNLEGN 240 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P VK R+R + R RR+M+A+VP A +IV NPTH+SVAL+Y AP V+AKG ++ Sbjct: 241 PMVKSRMRSLARDRIRRKMIANVPTATLIVTNPTHFSVALRYKPPLDHAPVVIAKGQDIL 300 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 AL IREI ++++P +E PLARALY+ E+ Q IP + Y VA ++ ++ K Sbjct: 301 ALHIREIATKHDIPIIEDQPLARALYKQVEVDQTIPPEFYEGVAALIRFINSQK 354 >UniRef50_D2R543 Type III secretion exporter n=3 Tax=Bacteria RepID=D2R543_9PLAN Length = 363 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 120/356 (33%), Positives = 190/356 (53%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M D++ +K+ T HR +KAREEGQ+ +S++LTS +L+ + ++W+ + + Sbjct: 1 MDDDNGEKSHEATQHRRDKAREEGQVVKSQDLTSAAMLMACLLLLWYFSSGMFELVGAFT 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + + + LLPL+ ++L A+ + G +F L Sbjct: 61 RDQITGQLWQPITLADVTSDFARIGGLLARTLLPLLLMMMLAAITIQLSQTGFLFLPNKL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 ++NPL KR+F+ L +LK +L+G V G LW ++ L +S Sbjct: 121 AMDLERINPLNNSKRIFAVSNLVSLGFGLLKVLLIGVVAGLSLWQQRATILELTDQSAAV 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 ++ ++ + ++ + D +Q + H + LRM+ Q +R+E K+ GDP Sbjct: 181 IGKFVLETALWTSIKIAAALLVLAILDYGYQWWKHEQDLRMTTQQVREEMKEQTGDPQTM 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R +Q+QR R+ +PKADVIV NPT ++ALQYD N M AP V+AKGAG++A RI Sbjct: 241 QRRKQIQRQLVMNRLSTSIPKADVIVTNPTELAIALQYDPNTMPAPIVIAKGAGVLAQRI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 R + ENNVP +E LARALY+ E+ Q +P + YAAVAEV+ +V+QLK +L G Sbjct: 301 RRLALENNVPVVERKELARALYQLVEVNQPVPSEQYAAVAEVVRYVYQLKGKKLPG 356 >UniRef50_O67813 Flagellar biosynthetic protein flhB n=1 Tax=Aquifex aeolicus RepID=FLHB_AQUAE Length = 350 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 118/352 (33%), Positives = 195/352 (55%), Gaps = 5/352 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M++E KTE TP++ K REEG + +S E+ S L++L+ + ++ F G +A+ + + Sbjct: 1 MAEE--HKTERATPYKRRKVREEGNVAKSHEIASSLVVLLSLLLLLFLGTYIAKEVILIF 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 A + H+ I++ + I + L PL +LV ++S V G +F+ K L Sbjct: 59 LAVTGYVHADISELGSLYENFYENI---VKVLTPLFFLALLVVILSHVAQFGFIFTLKPL 115 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 K+ ++NP GIKR+ S T E +K LK L+ + F L + Sbjct: 116 SFKWERINPFEGIKRLISLTTLFETVKNTLKAFLLIGIAVFVLKGSLYFFLSSSTYPLAE 175 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + + + + + + + D F+ + + KK+ MSR+++++E+KQ EG P VK Sbjct: 176 TLKSFIKTSAITLITLGVVALLIAFLDYAFKRWQYEKKIMMSRRELKEEYKQLEGHPEVK 235 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RI+ R A+ RMMA+VPKA V++ NPTH ++AL+Y+ K AP VVAKG G +A +I Sbjct: 236 SRIKARMRELAKSRMMAEVPKATVVITNPTHIAIALKYNPEKDKAPVVVAKGKGTIAQKI 295 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 EI ++P + P LARALY E+G++I + Y AVAE++A+V K+ Sbjct: 296 VEIAENYSIPVVRKPELARALYPAVEVGKEISPKFYKAVAEIIAYVMFKKKK 347 >UniRef50_D2NZE2 Flagellar biosynthesis protein FlhB n=21 Tax=Listeria RepID=D2NZE2_LISMO Length = 348 Score = 342 bits (879), Expect = 9e-93, Method: Composition-based stats. Identities = 109/353 (30%), Positives = 183/353 (51%), Gaps = 6/353 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ D+KTE TP R++KAR EG + +S+EL + LL+ +++F G + Sbjct: 1 MA--KDNKTEKATPRRIKKARNEGNVAKSKELNNAFSLLIVAGLLYFFGEMFIKNTIQAF 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 A L + N + L + E L+P++ VV+ L++ + G++FS K++ Sbjct: 59 VALLKQPPKLANMESYSL----FYLMEFGKVLMPIMVMVVIFGLMNYGVQVGILFSAKAV 114 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +P+F +LNP KR+FS + E++KA+L L+ V H ++ ++ + Sbjct: 115 KPQFKRLNPANYFKRVFSVKGIVEVVKALLLITLLSYVAYIGFRDHLDTLISYTGQNWLY 174 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 ++G L L + L + + D F+Q + + K LRMS+Q+I+DE K SEG P VK Sbjct: 175 SLGQIFALFKNEFLALFLVIAVIGLLDFFYQRYDYKKGLRMSKQEIKDEMKDSEGRPEVK 234 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R R + R + + + A +VNNPTH SV ++YD+ K APK++ KG +AL I Sbjct: 235 QRQRSIARGLLQGSITKKMADATFVVNNPTHISVVMRYDKTKDHAPKLLVKGEDELALFI 294 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 R++ + VP + LAR++Y + I LY V EV+ + + + Sbjct: 295 RQVADTDGVPMITNRQLARSIYYTTNPDEYIQEDLYKDVIEVMKELMDADKIK 347 >UniRef50_A0RCA2 Flagellar biosynthetic protein n=72 Tax=Bacillus cereus group RepID=A0RCA2_BACAH Length = 348 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 104/348 (29%), Positives = 187/348 (53%), Gaps = 6/348 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ D+KTE TP + +K+REEG I RS++L +L +LV V++F G L ++ + Sbjct: 1 MA--KDNKTEKATPQKRKKSREEGNIARSKDLNNLFSILVLAVVVYFFGDWLGFEIANSV 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 S + ILL++ + P++ V L + ++ G +FS K + Sbjct: 59 SVLFDQIGKNTDSTEYFYMMGILLLKVS----APILILVYAFHLFNYMIQVGFLFSSKVI 114 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PK S++NP R+FS ++ ++LK++ L+G V + +++ ++ + Sbjct: 115 KPKASRINPKNYFTRLFSRKSLVDILKSLFYMGLIGYVAYVLFKKNLEKIVSMIGFNWTA 174 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 ++ + + L +++ +I + D +Q + + + ++M +++++ E K +EGDP VK Sbjct: 175 SLTEIIRQIKFIFLAILIILIVLSIIDFIYQKWEYEQDIKMKKEEVKQEHKDNEGDPQVK 234 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G+ + A + + + A IVNNPTH SV L+Y+++ +AP VVAKG +AL I Sbjct: 235 GKRKNFMHAILQGTIAKKMDGATFIVNNPTHISVVLRYNKHVDAAPIVVAKGEDELALYI 294 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 R + E +P +E PLAR+LY E + IP LY AV EV+ ++ Q Sbjct: 295 RTLAREQEIPMVENRPLARSLYYQVEEDETIPEDLYVAVIEVMRYLIQ 342 >UniRef50_D0DA90 Flagellar biosynthetic protein FlhB n=1 Tax=Citreicella sp. SE45 RepID=D0DA90_9RHOB Length = 365 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 112/363 (30%), Positives = 182/363 (50%), Gaps = 4/363 (1%) Query: 1 MS-DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+ D+ DKT P+P +LE+AR +G+IPRS ++ + L ++ G Sbjct: 1 MAEDDGGDKTHEPSPRKLEEARRKGEIPRSPDMLTAACYLGMLATGLALGGGSVMGFGNA 60 Query: 60 LSAGLHFDHSIINDP--NLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 L + ++ ++ ++ A+ +LP + L L++ GLVF+ Sbjct: 61 LLPLIEQPDRLVPLFFNDMASAPSGGILLAAITPVLPWLGVPALAVLLTLFATRGLVFTA 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 L K S+L+P+ K F + E +K++ K +L + GFFL ++ + S Sbjct: 121 SKLSLKASRLSPVENAKNKFGRRGLFEFVKSLAKLVLYSVLLGFFLSTRLDEIAGIGRSS 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 A DL+ + + + + D +Q H+++ RMS++++RDE+K++EGDP Sbjct: 181 AHEATALMADLMLRLLGIAAMIAVGLGTIDYLWQRAEHMRRNRMSQKELRDEYKEAEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 K R + A RMM DVP ADV++ NPTHY+VAL++ AP VAKG +A Sbjct: 241 MFKQHRRARAQEIAMNRMMVDVPDADVVIVNPTHYAVALKWSRQPGEAPVCVAKGVDEIA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW-RLAG 356 RIREI A++ VP PP ARA++ EIG QI + Y VA + + +++ R Sbjct: 301 RRIREIAADSGVPIHSDPPTARAIHATTEIGDQIAAEHYRPVAAAIRFAEDMRKQMRRNM 360 Query: 357 GQR 359 G R Sbjct: 361 GAR 363 >UniRef50_A3D418 Type III secretion protein, YscU/HrpY family n=10 Tax=Proteobacteria RepID=A3D418_SHEB5 Length = 349 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 97/343 (28%), Positives = 167/343 (48%), Gaps = 2/343 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT RL +AR GQ+ +S E+ + L + + + + G +L + + ++ L Sbjct: 3 EKTEKPTEKRLREARNRGQVIKSAEIVTGLQMAIILGYFLYEGPALVQAMMALID--LTI 60 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + + + A+ L L +V ++ + G V++ +S+ P +K Sbjct: 61 NAINLPLETAAEQIVGTFAMLALRFLGGLTLVLVFTIVVGNSVQTGPVWATESIMPSMNK 120 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LN + K++ S ++ EL K ++K ++ V + L + L + Sbjct: 121 LNVMNNAKQLISLKSLFELAKNLVKVTVLSLVFYYLLHRYVNAFQYLPLCEEACGISVIS 180 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 ++ + + D FQ +S +K+L+MS+ D + E+K SEG+P +K + R+ Sbjct: 181 TMITWLWGSFLGCYLIFGIADYAFQRYSLMKELKMSKDDTKQEYKDSEGNPEMKQKRRET 240 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 QR A + +V KA V+V NPTH +V L Y E + PKV+ K +AL I + + Sbjct: 241 QREVASGSLANNVRKATVVVRNPTHIAVCLYYCEGETPLPKVLEKAEDHMALHIVALAEK 300 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 VP +E PLARAL++H E G IP L+ VAE+L V + Sbjct: 301 AGVPIVENIPLARALFKHVETGDVIPESLFEPVAELLRLVMAI 343 >UniRef50_Q2RQH7 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQH7_RHORT Length = 356 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 129/352 (36%), Positives = 212/352 (60%), Gaps = 1/352 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D+ D KTE P+ +L KARE+GQ+ +S+E+ S L+L + ++ G +A +++ Sbjct: 1 MADDDKDSKTEDPSSRKLGKAREDGQVAQSQEVKSFLMLGGALFMVAVMGGWIADKVALR 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + L + D + + L+ + L L I+ +++A++ V GL+FS K Sbjct: 61 VRVFLEQPDTFHLDAVGLRDLLARLLLDIGLVLAMPIAMFIVLAILGGVGQFGLIFSAKK 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + P+ K++PL G KR+FS + E +K I+K ++V ++ + M + + Sbjct: 121 ITPELQKISPLAGFKRLFSVRALVEGVKGIVKVVVVSAIVAALMLPRLRTPELFMDQDIL 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 +G L+ + + VV V + D FQ + H+++L+M++Q+++DE K +EGDP + Sbjct: 181 VTLGQIHRLLVVLLISVVTIVGAIAAADFAFQKYKHIEELKMTKQEVKDEHKNAEGDPQI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +IRQ++ AR RMMA VP+A V++ NPTH++VAL+YD + MSAP +VAKG +AL+ Sbjct: 241 KSKIRQLRMRRARERMMARVPEASVVITNPTHFAVALKYDMDMMSAPVLVAKGQDFIALK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 IRE+ EN VP +E PPLARAL+ EI +IP Y AVAEV+ +V +LK+ Sbjct: 301 IREVAEENEVPIVENPPLARALFAAVEIDHEIPPDHYKAVAEVIGYVMRLKK 352 >UniRef50_C0GJG3 Type III secretion exporter n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJG3_9FIRM Length = 309 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 108/310 (34%), Positives = 175/310 (56%), Gaps = 1/310 (0%) Query: 41 GVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVV 100 ++ G L L+ + L D ++ P + + + L + P+ + + Sbjct: 1 MTALFMAVGQFLFNHLAQTMLRFLQMDGRLL-TPGNLNALTMRAFGDFFLFMAPVFAVSL 59 Query: 101 LVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTG 160 + L + G +F+ + L P+F++LNP G K++ S + EL K++LK ++VG V Sbjct: 60 IAGLAVNYLQVGFLFTTEPLNPQFNRLNPAEGFKKIASKRALFELAKSLLKVLMVGFVAF 119 Query: 161 FFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLR 220 F+ + ++ + + L AL + + + D +Q + H + L+ Sbjct: 120 LFVRGNLENLLATLYQDAAGVWETLRSLSLNLALRIGALFLVLSVLDYIYQRYEHNQNLK 179 Query: 221 MSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDE 280 MS+Q+I++E KQ EGDP +K ++R+ QR+ A +RMM DVP+A V++ NPT +VA++Y E Sbjct: 180 MSKQEIKEEHKQMEGDPQLKSQLRERQRSIATQRMMQDVPEATVVITNPTELAVAIRYRE 239 Query: 281 NKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVA 340 ++ AP VVAKGA L+A RIRE ENNVP +E P+AR LY EIGQ+IP LY AVA Sbjct: 240 DRDEAPTVVAKGAALMAKRIRETAKENNVPIMENKPVARMLYDQVEIGQEIPVDLYQAVA 299 Query: 341 EVLAWVWQLK 350 E+LA V++L+ Sbjct: 300 EILALVYKLR 309 >UniRef50_P96069 Secretion system apparatus protein ssaU n=35 Tax=Enterobacteriaceae RepID=SSAU_SALTY Length = 352 Score = 340 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 102/352 (28%), Positives = 173/352 (49%), Gaps = 10/352 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS +KTE PT +L R+EGQ+ +S E+TSL L+ ++ ++ +L Sbjct: 1 MS----EKTEQPTEKKLRDGRKEGQVVKSIEITSLFQLIA----LYLYFHFFTEKMILIL 52 Query: 61 SAGLHFDHSIINDP-NLILGQIILLIREAMLALLPLISGVVLVALISP-VMLGGLVFSGK 118 + F ++N P + L Q+ + E++ + L + V+VA + + G+V + K Sbjct: 53 IESITFTLQLVNKPFSYALTQLSHALIESLTSALLFLGAGVIVATVGSVFLQVGVVIASK 112 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 ++ K +NP+ K++FS + EL K+ LK I++ + FF +++ L Sbjct: 113 AIGFKSEHINPVSNFKQIFSLHSVVELCKSSLKVIMLSLIFAFFFYYYASTFRALPYCGL 172 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + L+ + V++ I + D FQ + K L+MS+ D++ E K EGDP Sbjct: 173 ACGVLVVSSLIKWLWVGVMVFYIVVGILDYSFQYYKIRKDLKMSKDDVKQEHKDLEGDPQ 232 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K R R+MQ + V ++ +V NPTH +V L Y M P+V+ KG+ A Sbjct: 233 MKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQAN 292 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 I I N +P +E LAR+L+ E G +IP L+ VA +L V ++ Sbjct: 293 YIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKID 344 >UniRef50_Q2SC29 Type III secretory pathway, component EscU n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SC29_HAHCH Length = 351 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 99/350 (28%), Positives = 175/350 (50%), Gaps = 2/350 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 SD+KTE PTP +L AR++GQ+ S+++ S + ++ + LS ++ Sbjct: 2 SDEKTEKPTPKKLRDARKKGQVAHSKDVVSTATICAMFLLLLATSDTYLSHLSILIELPA 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + + ++ + +I E + L + V+ A+++ + G +F+ +SL+P Sbjct: 62 QYMDRPFLEALPMV--VDNVIYELIYLTLMPVGVVMASAILANFLQVGALFAVESLKPDL 119 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNP+ G K++F + E +K+++K ++ + + + RL Sbjct: 120 KKLNPVEGFKKIFCVKNFIEFIKSLIKVGVLSYLVYMLIKDNLNDSARLHYCEVECIPDF 179 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 L+ L + I + D F Q +K+ +MS+ +++ E+KQ EG P +KG+ + Sbjct: 180 VGTLLKQLILYSAITFIALAAADFFIQKQQFIKQQKMSKDEVKREYKQMEGSPEIKGKRK 239 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q+ R + A V K IV NPTH +V + Y++ PKV+ KGA +A IR+I Sbjct: 240 QIHREMMNTSIPAQVKKCSAIVTNPTHLAVGIYYEKGVEDVPKVMVKGADQMAKVIRKIA 299 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 E +P +E PLAR L++ A++ +P L+ AVA VL WV L + R Sbjct: 300 EEEGIPMMENVPLARGLWKRAQVNDYVPPDLFEAVAAVLQWVDSLDQQRQ 349 >UniRef50_A4TRY5 Type III secretion apparatus protein n=30 Tax=Enterobacteriaceae RepID=A4TRY5_YERPP Length = 355 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 96/357 (26%), Positives = 178/357 (49%), Gaps = 3/357 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +K E PTP RL++A+E+GQ+ +S E+TS + L+ V G SL + ++ + + Sbjct: 2 STEKNEKPTPKRLKEAKEKGQVVKSVEITSGVQLVALVIYFLLTGYSLVEQAKALIRSSI 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + +G + M ++ L +++V +I+ + G + + K++ K Sbjct: 62 IQLQQPLTLALARIGA--ECMTVLMHIVVVLGGALIVVTIIAGIAQVGPLLATKAVSFKG 119 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 ++NP+ K++FS ++ EL+K++LK ++ + G+ L + P L A+ Sbjct: 120 ERINPIQNAKQLFSLRSVFELMKSLLKVGVLTLIFGYLLMQYAPSFGYLTHCGSRCALPV 179 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 L+G ++ + D FQ ++ +K+L+MS +++ E+K S GDPH+K + R Sbjct: 180 FSTLMGWLLGSLIACYLVFSLMDYAFQRYTIMKQLKMSHDEVKREYKDSNGDPHIKQKRR 239 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q+Q +V ++ +V NPTH++V L Y + P V+ KG A I + Sbjct: 240 QLQHEVQSGSFATNVRRSTAVVRNPTHFAVCLIYHPEETPLPIVIEKGHDEQAALIVSLA 299 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 ++ +P +E LARAL+R G IP Q + VA +L +L ++ + P Sbjct: 300 EQSGIPVVENIALARALHRDVACGDTIPEQFFEPVAALLRMALELD-YQPSSDDPPR 355 >UniRef50_Q9ZL73 Flagellar biosynthetic protein flhB n=16 Tax=Helicobacteraceae RepID=FLHB_HELPJ Length = 358 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 113/356 (31%), Positives = 192/356 (53%), Gaps = 4/356 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M++E +KTE P+ +++KAREEG +P+S E+ L LL G+ I+ + S M Sbjct: 1 MAEE--EKTELPSAKKIQKAREEGNVPKSMEVVGFLGLLAGLMSIFVFFIWWVDGFSEMY 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L D S+ + L ++ L LLP++ +++VA +S V+ G +F+ K + Sbjct: 59 RHVLK-DFSLDFSKESVQELFNQLAKDTFLLLLPVLIILMVVAFLSNVLQFGWLFAPKVI 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PKFSK+NP+ G+K +FS + + LK L + F ++ + Sbjct: 118 EPKFSKINPINGVKNLFSLKKILDGSLITLKVFLAFFLGFFIFSLFLGELNHAALLNLQG 177 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + ++ + D+ + + L+M++Q+++DE+KQ EG+P +K Sbjct: 178 QLLWFKSKALWLISSLLFLFFVLAFVDLIIKRRQYTNSLKMTKQEVKDEYKQQEGNPEIK 237 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +IRQM A +MM ++PK++V+V NPTHY+VAL++D + P VVAKG +A+RI Sbjct: 238 AKIRQMMVKNATNKMMQEIPKSNVVVTNPTHYAVALKFD-EEHPVPVVVAKGTDYLAIRI 296 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 + I E+++ +E LAR LYR ++ IP +L+ AVA V A V +L++ R Sbjct: 297 KGIAREHDIEIIENKTLARELYRDVKLNATIPEELFEAVAIVFAQVAKLEQERQKQ 352 >UniRef50_B7QTP8 Type III secretion exporter n=1 Tax=Ruegeria sp. R11 RepID=B7QTP8_9RHOB Length = 360 Score = 340 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 112/358 (31%), Positives = 178/358 (49%), Gaps = 3/358 (0%) Query: 1 MS-DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS D+ DK+ PTP ++ KARE+G +P+S +L+ L + V++ G + R + + Sbjct: 1 MSQDDDSDKSYEPTPEKIRKAREKGDVPKSTDLSVAAAYLGLIIVVYTSGEDMVRDMGSL 60 Query: 60 LSAGLHFD--HSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 + + L H+ + + + L++ A+ P+ ++S V LVF+ Sbjct: 61 MMSFLDQPDRHAELFFSDNGTPPVGGLLKSVASAMAPMFIIPAAAVILSLVGQRALVFAP 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 L+PK S+++ + K F E K+ +K IL G +L + P M+ A Sbjct: 121 SKLEPKLSRISIMSNAKNKFGMTGLFEFAKSTVKLILFSVCMGIYLNYRLPDMIASAATG 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + L +L ++ + + D FQ +K MSR++I DE K SEGDP Sbjct: 181 AFVVVTMLGQLAIEFMVLALIIALAVGVVDAAFQQADFTRKNMMSRKEIMDEMKNSEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 H+KG RQ + A + DV ADV++ NPTHY+VAL++D AP V+KG VA Sbjct: 241 HMKGARRQKAQQIAMSAGVQDVATADVVIVNPTHYAVALKWDRQPGQAPVCVSKGVDEVA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 IRE+ EN VP PP ARAL+ EIG +I + YA VA + + ++++ Sbjct: 301 AIIREVANENGVPIHSDPPTARALHAAVEIGDEIHEEHYAPVAAAIRFAEKMRQRAKG 358 >UniRef50_C1A547 Flagellar biosynthesis protein FlhB n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A547_GEMAT Length = 366 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 119/358 (33%), Positives = 194/358 (54%), Gaps = 1/358 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S+ +KTE + RLE+ARE+GQI +S E + LL + V F G L R L + Sbjct: 4 SESGGEKTEEASGKRLEEAREKGQIAKSPEFATAAFLLGFLLVFSFTGPQLWRFLLDTMG 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 L + ++ + ++ ++A+L ++ + +VA+ G + + K+L Sbjct: 64 TSLATAGDSEHMGAGLIPWMQVISFRTIVAMLGAVAAMAVVAVAVQAAQTGGLLTTKTLA 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL-MAESPIT 180 PKF +LNP+ R+ Q+ EL KA+LK ++VG + WP + L + SP+ Sbjct: 124 PKFERLNPMSNAGRILGKQSIVELAKALLKMMIVGYAVYMTVSDAWPDLQALALNASPMA 183 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + + D +Q + ++ L+M++Q++++E K EG+P VK Sbjct: 184 LLEVVQKYGFALIKNAGMMFLVLAMADYGYQRWKTMEDLKMTKQEVKEEHKSQEGNPEVK 243 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GR R + R RR+M A VPKADVI+ NP H ++A++YD N AP VVA G +A RI Sbjct: 244 GRRRAIARERIRRQMFAAVPKADVIIVNPVHIAIAIKYDPNVAPAPYVVALGERKIAQRI 303 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +E+ ++ VP +E PLARAL + A++G IP ++Y AVAEVLA+V + + A + Sbjct: 304 KELAFQHGVPVIENKPLARALIKVAKVGTVIPVEMYLAVAEVLAFVMRQRERYGAKWR 361 >UniRef50_C6NYG2 Flagellar biosynthesis protein FlhB n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYG2_9GAMM Length = 380 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 119/372 (31%), Positives = 198/372 (53%), Gaps = 5/372 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ +++KTE + RL+ A+++G++PRS++ T+ L+L +++W S + + Sbjct: 1 MSE-AEEKTEKASQKRLDDAKKDGKVPRSQDWTASLVLFAATALLWAASGSWGTEILSRM 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 GL S ++ I+ + L +++ A+ S +++GG V+S L Sbjct: 60 VVGLSV--SSLHFRADWQRTILQEAAPLFVVFLMFGGVILVSAIASILLVGGWVWSPGKL 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 ++ +L+ G+KR F+ + + L + +KT L+G G +W L+ P Sbjct: 118 W-EWDRLSWTSGLKRPFTKKGFSVLWEDSVKTGLLGVCMGLIVWGQKGVWFALLDIPPRR 176 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ ++ + ++ D F Q L+ +MS+QDI+DE K+ +G+P +K Sbjct: 177 AISLGAAILVKDFFIFASLLLVPGAIDWFLQRRFFLESQKMSKQDIKDEHKEVDGNPLIK 236 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIR++QR AR RMM V KA V++ NP HY+VAL+Y M+ P V AKG +AL+I Sbjct: 237 SRIRRLQRRIARMRMMKSVEKASVVLINPEHYAVALRY-TESMTVPIVTAKGIDTIALKI 295 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 REI + VP LEAP +AR+LY+ +IG IP LY AVA VLA++ L ++ P Sbjct: 296 REIAKIHGVPILEAPSMARSLYKVCDIGDLIPAGLYEAVAIVLAYIDHLHEAKIGNKPLP 355 Query: 361 VQPTHLPVPEAL 372 H + + L Sbjct: 356 KDWEHTGLGKRL 367 >UniRef50_Q4JMS7 Predicted flagellar biosynthetic protein n=1 Tax=uncultured bacterium BAC17H8 RepID=Q4JMS7_9BACT Length = 385 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 121/384 (31%), Positives = 202/384 (52%), Gaps = 16/384 (4%) Query: 1 MSD---ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M++ + +KTE PT RL+KA EEG+I S+E+ L G+ + +A L Sbjct: 1 MAEENQDGQEKTEEPTQRRLQKAAEEGRILTSKEVMVFTTLAAGLVLFMGLSPFVASGLD 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 L S N L L ++ +LA L + +++V +++ +GGL F+ Sbjct: 61 AW--GSLFRIDSGFNLDTLGLVKVRYAFWLVILATLVVGMPLIVVIILTQAAVGGLNFAA 118 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 +++ K ++++P+ G+KR+FS + EL K++LK L+ + ++H PQ++ L + S Sbjct: 119 QAMNFKGNRIDPIAGLKRIFSVKGLVELAKSVLKVGLLFGIGALVIYHQLPQLVFLSSSS 178 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + A +++ ++ + D +Q +H + LRM+ ++++DE KQ+EG P Sbjct: 179 LSQGVNRAAQAFPFLVGGLLIALLVIAAIDYAWQKHTHTQSLRMTLKEVKDESKQTEGSP 238 Query: 238 HVKGRIRQMQRAAA-----RRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 V+ +IR+MQ A +R + +V A +V NPTH++VAL+Y + AP V+A G Sbjct: 239 EVRAKIRRMQYQQAQESSRQREALGNVGDATTVVTNPTHFAVALKYAAGQEGAPVVLAMG 298 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 G +A++I E E V TL P LARALY +EIG +I LY AVA VLA+V++L Sbjct: 299 RGQMAMQIIERAKEARVRTLRIPMLARALYFTSEIGGEITEGLYNAVAVVLAYVFRLDSG 358 Query: 353 RLAGGQRPVQPTHLPVPEALDFIN 376 + L +P L F Sbjct: 359 ET------MDMPELTLPPELRFDE 376 >UniRef50_A3SFT1 Flagella-associated protein n=2 Tax=Sulfitobacter RepID=A3SFT1_9RHOB Length = 375 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 115/374 (30%), Positives = 200/374 (53%), Gaps = 7/374 (1%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRE----LTSLLILLVGVSVIWFGGVSLAR 54 M++ SD +KT PT +L+ AR++G +P S+E + + +L + V+ + + Sbjct: 1 MAENSDSTEKTLEPTEKKLKDARKKGDVPSSKETGNMVVVVAMLGIAALVLPYQAPQIVV 60 Query: 55 RLSGMLSAGLHFDHSIINDPNLILGQII-LLIREAMLALLPLISGVVLVALISPVMLGGL 113 LS +L + + + LGQI+ + A+LP+ + L I V+ G Sbjct: 61 ALSVLLDHSPNLMVATGEPGVIRLGQIMSEFFYMIVWAVLPIFGVLFLGGAIGAVIQGET 120 Query: 114 VFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL 173 V + + ++PK SKL+PL G+KR+FSA E K+I+K + +G + +F ++ Sbjct: 121 VVAAERIKPKLSKLSPLEGLKRLFSANALVEFAKSIVKVLAIGGLAVWFTNEAVRRIWTS 180 Query: 174 MAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQS 233 P G + + ++P+ D+ ++ F +K RMS++DI+DE K+S Sbjct: 181 SGFIPEHLPGYLTAAAVKLLIAAAILLVPIAIADILWRRFDWRRKQRMSQKDIKDEHKES 240 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EG P ++ + + +R +++R + VP ADVI+ NPTHYS+AL+YD + AP +AKGA Sbjct: 241 EGSPEIRQKRARRRRELSQQRTITAVPLADVILTNPTHYSIALKYDPAQDMAPVCIAKGA 300 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +A RIRE+ AE+++P +E PL R LY ++ Q IP + VAE++++V+ L+ + Sbjct: 301 DHLARRIREVAAEHDIPMIENKPLTRMLYDEIDVDQVIPVAHWEIVAEIISFVFDLRNNK 360 Query: 354 LAGGQRPVQPTHLP 367 + P Sbjct: 361 KRAAPQGSTLRTDP 374 >UniRef50_UPI00019F17CC secretion system apparatus protein SsaU n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F17CC Length = 347 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 101/341 (29%), Positives = 178/341 (52%), Gaps = 6/341 (1%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KT+APT ++ AREEGQ+ ++ EL + + L V + ++ G + + LS +L Sbjct: 2 SGEKTQAPTSKKIRDAREEGQVAKTAELAAGVQLAVILMYLYLWGDDIWQDLSDLL---- 57 Query: 65 HFDHSIINDPNLI-LGQIILLIREAMLALLPLISGVVLVA-LISPVMLGGLVFSGKSLQP 122 F +NDP I I + + + L + V+ A + + + G +FSGK++ P Sbjct: 58 LFTIDKMNDPLPIAFAGFISMFGKFVFEDLIFLFAVLFFASMSAYLAQIGFLFSGKAMMP 117 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 K KL+ + +K +FS ++ ELLK ++K ++GSV + + P + ++ P AM Sbjct: 118 KLDKLDVVKNLKNIFSVKSLVELLKNLVKMTIIGSVFYYLFCRYIPSLRNMVYIEPADAM 177 Query: 183 GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 + ++ +VL I D +Q + +K LRMS ++++ E+K+ EG VK Sbjct: 178 QVTLKIIFWLWGGLVLCYIVFSLADYAYQRYELMKNLRMSHEEVKQEYKEMEGSAEVKSH 237 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 + + + + V K+ ++ NPTH ++ + YDEN P + AKGA L+A I + Sbjct: 238 RKSLHQEIQSGSLANTVKKSSAVIRNPTHLAICIYYDENITPLPVITAKGADLIARYIVD 297 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVL 343 I + VP +E PLAR L + + G I ++A++E+L Sbjct: 298 IAEKAGVPVIENVPLARGLNKEIKTGDYISPPFFSAISEIL 338 >UniRef50_D2TZS1 Type III secretion inner membrane protein YscU,SpaS,EscU,HrcU,SsaU n=1 Tax=Arsenophonus nasoniae RepID=D2TZS1_9ENTR Length = 352 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 98/344 (28%), Positives = 174/344 (50%), Gaps = 2/344 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT R+ +AR++GQ+ +S E+ ++L + V + + G +L + ++ L Sbjct: 6 EKTEKPTQKRMNEARKKGQVIKSNEIVTVLKMAVILGYLIVEGHALFNAIGELI--ILTV 63 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + I I + ++ L+ +++ +S ++ G +++ KSL F+K Sbjct: 64 RSLSLPIDVAAKTIIGSFIMLLLRFMVGLVVVLIVTICLSCIVQTGPIWAHKSLAFSFNK 123 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 +N + K++FS + E K ILK I++ V + L ++ L + Sbjct: 124 MNIIKNAKQIFSMKNLFEFGKNILKVIVLTLVFYYLLDYYVNLFQYLPTCGIDCGVMVTF 183 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 L+ ++ I D FQ + +K+L+MS++D + EFK +EG+P +K + R++ Sbjct: 184 TLIQWLWGGFLVCYIVFAIADYGFQYYHVMKELKMSKEDTKREFKDTEGNPQIKQKRREI 243 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 QR ++A+V K+ VI+ NPTH V L Y P+VV K +AL I ++ + Sbjct: 244 QREITSNSVVANVRKSTVIIRNPTHIVVCLYYQPGITPLPQVVEKFQDNMALHIVKLAEK 303 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +P +E LARAL++ E GQ IP L+ VAE+L V L+ Sbjct: 304 AGIPMVENILLARALFQQVETGQMIPESLFEPVAELLRLVMDLR 347 >UniRef50_B1LWT8 Flagellar biosynthetic protein FlhB n=8 Tax=Methylobacterium RepID=B1LWT8_METRJ Length = 355 Score = 337 bits (864), Expect = 6e-91, Method: Composition-based stats. Identities = 115/341 (33%), Positives = 189/341 (55%), Gaps = 1/341 (0%) Query: 12 PTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSII 71 P+ RL++A E G + S E+ + +L + ++A L L A L H++ Sbjct: 14 PSQRRLDQAIERGDVATSTEINTFAMLGAFTLALLVAAPTIATNLLHGLKAYLANAHALP 73 Query: 72 NDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLP 131 +D + + + + A+ + V+ L + ++ LVFS ++L PKFS+L+P+ Sbjct: 74 DDAAAMKAAMTRGLWLWLQAVAVPVGLAVVAGLAAGLLQHPLVFSAETLMPKFSRLSPMA 133 Query: 132 GIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGL 191 G+KR+ + + K + K VG V LW+ ++ P +M + L Sbjct: 134 GVKRLLGVEALFQFGKGLAKIAAVGVVGAVMLWNDRDRLEVFARLDPAASMPAILSLSLK 193 Query: 192 CALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAA 251 ++ + + D + F K+ RMS+++++ E K+SEG+P VKGR++Q++ A Sbjct: 194 LLAGMLCMHLAITLGDALYARFRWRKRHRMSKEELKQEMKESEGNPEVKGRLKQLRMARV 253 Query: 252 RRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPT 311 ++RMMA VP A V+V NPTHY+VAL+Y+ M+AP VAKG +ALRIR + AE+ V Sbjct: 254 KKRMMAAVPTATVVVTNPTHYAVALRYETG-MAAPVCVAKGVDALALRIRAVAAEHGVAV 312 Query: 312 LEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 +E PPLARAL+ EI ++IP + Y AVAEV+ +V +L+R Sbjct: 313 IENPPLARALHATVEIDREIPAEHYRAVAEVIGFVLRLRRR 353 >UniRef50_Q1GCC9 Flagellar biosynthetic protein flhB n=3 Tax=Rhodobacteraceae RepID=Q1GCC9_SILST Length = 363 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 115/360 (31%), Positives = 185/360 (51%), Gaps = 5/360 (1%) Query: 1 MSDESDD--KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MSDE+DD K+ PTP +L KAR+EG +P+S +L L + + G S +L Sbjct: 1 MSDENDDSDKSFEPTPEKLRKARQEGDVPKSNDLLQAASYLGLLIAFYTAGRSSIEQLGT 60 Query: 59 MLSAGLHFD---HSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVF 115 +L + + + + I +A+ +++ + + +++ +VF Sbjct: 61 VLMSMIDQPDRLAPVFFGDGIAAPVAWEFISDALTSVIAWFAVPAALVILAVFAQKAMVF 120 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 + K +QPK S+L+ + K F E K+ K +L G +L P+M+ + Sbjct: 121 APKRIQPKLSRLSIIKNAKNKFGRSGLFEFAKSFFKLLLYSITLGVYLSWRLPEMIASVG 180 Query: 176 ESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 SP T + + L +L ++ + + D FQ ++K MSR+D+ DE K SEG Sbjct: 181 TSPFTVVPFLVQLAMEFLILTLIIALAIGLVDAPFQQAEFIRKNMMSRKDVMDEMKNSEG 240 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DPH KG+ +Q R +++ A VP+ADV++ NPTHY+VAL++ SAP+ VAKG Sbjct: 241 DPHTKGQRKQKGRQIVSKQIAAAVPEADVVIVNPTHYAVALKWSRVSGSAPECVAKGVDG 300 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 VA IREI EN VP PP ARALY E+G++I + YA VA + + ++++ Sbjct: 301 VAAMIREIAQENGVPLHSDPPTARALYATVEVGEEIAEEHYAPVAAAIRFAEEMRKKAKE 360 >UniRef50_D0MGA4 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGA4_RHOM4 Length = 360 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 112/355 (31%), Positives = 198/355 (55%), Gaps = 1/355 (0%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 + D K PTP RL+KAREEG + RS+E +++L+LL G+ + + + Sbjct: 3 DRDQKQFDPTPRRLQKAREEGNVFRSQETSAVLLLLGGLLTLALSLPYAYGLMRQFTART 62 Query: 64 LHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 L ++G + + L+P + ++++A V G + K L PK Sbjct: 63 LMSAPFYPLTSGSVIGALQEALMVLGRLLVPFFALLLVIAFGVNVWQTGWHPTLKPLLPK 122 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG 183 +++PL G++R+FS++ +LKA+LK +VG + ++ H P+++ L S + Sbjct: 123 PERISPLRGLQRLFSSRGLFNVLKALLKIAIVGPIAFLVIYRHLPEILELHTHSLEAILQ 182 Query: 184 NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRI 243 + A + ++ + D ++ + + + L+M+ Q+++DE +++EGDP VK R Sbjct: 183 ATGLWMLQLAAYTLGALLLLSAADFAYEKWKYRQDLKMTAQEVKDEHRETEGDPMVKSRR 242 Query: 244 -RQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 ++ + A RRR+ V ++DV++ NPTHY+VAL+YD ++ AP+V+AKG ALRIR Sbjct: 243 LKKARELARRRRLDHAVLRSDVVITNPTHYAVALRYDPSEAPAPRVLAKGIRKRALRIRA 302 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 + E+ +P +E PPLARALY + Q+IP +LY AVA +LA +++ + + G Sbjct: 303 LALEHGIPVVEDPPLARALYHNVPEEQEIPEELYLAVATILAEIYRQRGQQPPGA 357 >UniRef50_C7R0I2 Type III secretion exporter n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R0I2_JONDD Length = 380 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 127/373 (34%), Positives = 206/373 (55%), Gaps = 5/373 (1%) Query: 1 MSDE-SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MSD+ S ++TE TP R++ R++G + +S++L++ + G +V+ F ++ + + + Sbjct: 1 MSDDQSQERTEEATPKRMKDVRKDGSLQKSQDLSAWAGIGAGTAVLPFVFGNVEKHIEDV 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L + DP L++ + + + AL PL++ V + A+++ + GG + K Sbjct: 61 LMNISTI--ASTPDPLLVVPMLGDALAGILPALAPLLAVVFIAAILANGV-GGYYIATKK 117 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+P F + N + G+K+ F Q + +KA+LKT+++G+V + P + + A + Sbjct: 118 LKPTFKQFNLIKGMKQKFGMQALWQGVKALLKTVVIGAVLYLLIQGMIPVIQQSGALTMR 177 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 +G A + V I + DV + + KK +M++++I+DE K +EGDP + Sbjct: 178 AVLGYASEKFMQLMWTAVAAGIALAILDVVVVMKRNRKKTKMTKKEIKDENKNTEGDPLL 237 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KG IR Q A +R RM+A V ADV+V NPTH +VAL Y + APK+VAKG LVA R Sbjct: 238 KGAIRSRQLAMSRNRMIASVADADVVVVNPTHVAVALTYVAGE-GAPKLVAKGKNLVAQR 296 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE ++VP + PLARAL H EIG IP L+ AVA+VLA+V L++ A Sbjct: 297 IREEAEAHDVPLVRDIPLARALNAHCEIGHPIPPALFTAVAQVLAFVMLLRQRGAAMATV 356 Query: 360 PVQPTHLPVPEAL 372 P VP + Sbjct: 357 KTMPAPTDVPLDM 369 >UniRef50_B1ZR29 Type III secretion exporter n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZR29_OPITP Length = 367 Score = 334 bits (858), Expect = 3e-90, Method: Composition-based stats. Identities = 104/353 (29%), Positives = 180/353 (50%), Gaps = 1/353 (0%) Query: 1 MSD-ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M++ + D KTE P+ +L +A + GQ RS EL L +L+ ++ + F +R ++ Sbjct: 1 MAEHDQDQKTEQPSEKKLSEAMDRGQFARSPELAVLFLLVAVLAALSFSVREASREVATY 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 ++ S+ + + I + + AL PL+ V+ AL++ + G + ++ Sbjct: 61 AASLFSRFGSMKVEHDTIRAYFGEAMLTSGTALAPLLLACVVAALLAGGVQSGFRLTPEA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 K +LNP+ G KR+F+ +LK + +G+ + Sbjct: 121 FGFKPERLNPVEGFKRVFNKSALVRAGVDLLKLVALGAALYLGARGLMMDPLFSAPVEAA 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 D + ++L + + ++ F + L M+RQ+++DE K EG Sbjct: 181 YLGQFLTDATYVFLSRLILALGVITAISYSYEKFKTHRDLMMTRQELKDEHKNQEGSSQA 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +R+M R +R+MM+ VP ADV+V NPTH++VAL+Y+ K +AP V+AKG A R Sbjct: 241 KMAMRRMARRLTQRQMMSAVPTADVVVTNPTHFAVALKYERGKDAAPVVLAKGENRFAQR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 I+ I AE+ VP +E P+AR L+ ++G+ IP +LY AVA +LA V++ R+ Sbjct: 301 IKAIAAEHGVPMVENKPVARLLFSMGKVGEAIPPELYQAVASILAVVYRTHRY 353 >UniRef50_A3V235 Flagellar protein FlhB n=2 Tax=Rhodobacterales RepID=A3V235_9RHOB Length = 383 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 128/386 (33%), Positives = 202/386 (52%), Gaps = 21/386 (5%) Query: 1 MSD---ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M+D + +KTE PT RLEKA+E+GQ+ S+EL L L VG +++FG + L Sbjct: 1 MADEASDGQEKTEEPTQKRLEKAKEDGQVASSKELFVLSTLSVGF-LLYFGLLPFLSGLL 59 Query: 58 GMLSAGLHFDHSIINDPNLI---LGQIILLIREAMLALLPLISGVVLVALISPVMLGGLV 114 SA L F +I + ++++ LPL+ +VL + M G + Sbjct: 60 LEWSALLRFSGEAGLHDEIIRNSSTSFAFIFWKSVIFALPLLVIIVLTQMA---MSGSIN 116 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 +S +L K S++NP+ G+KRMFS + E+LKA+ K + F +++ Sbjct: 117 WSASALAFKGSRINPVNGLKRMFSVKALVEMLKAVGKVASLIGAAIFVFSSEVDKLLTSQ 176 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 A + D+ ++ +L + + FDV +Q + + KKL+M+ Q+++DE KQ+E Sbjct: 177 ATHLFGGLSRLGDVFIFLMIVFLLVLAVIAMFDVVYQQYDNNKKLKMTLQELKDESKQTE 236 Query: 235 GDPHVKGRIRQMQ-----RAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVV 289 G P VK +IR++Q RA RR M VP A I+ NP H++VAL+Y+ AP ++ Sbjct: 237 GSPEVKAKIRRLQMTAGSRAKQRREAMEQVPSATAIITNPIHFAVALKYEIGTRGAPTIL 296 Query: 290 AKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 A G G A I +G E V LARAL+ IG +IP LY AVA VLA+++QL Sbjct: 297 AMGRGHQAQEIIRLGKEAGVTVFSNELLARALFFAGRIGDEIPPPLYTAVAAVLAFIYQL 356 Query: 350 KRWRLAGGQRPVQPTHLPVPEALDFI 375 + G++ +P + +P+ + F Sbjct: 357 NK-----GEQVDEP-DVDLPDDMLFD 376 >UniRef50_B2IK02 Flagellar biosynthetic protein FlhB n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IK02_BEII9 Length = 360 Score = 334 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 106/349 (30%), Positives = 184/349 (52%), Gaps = 3/349 (0%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ + D +TE PT +++ A E+G +P SRE+ +L + V F + + Sbjct: 1 MAEKPDQDSQTEEPTAKKMDDAIEQGNLPISREMIIFASMLSLLIVNAFILRNSLADIVT 60 Query: 59 MLSAGLHFDHSI-INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 +L + I + + + L++ E L+P+I ++ + + + L Sbjct: 61 LLKYVFNNSDQIPLRNQLDAVNLFQLILTETGPRLVPIILPFMIAGIAANIGQSKLRLIL 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 + +QP F L+ + G K++F + AE LK ++K V + L + +++ M Sbjct: 121 ERIQPDFGHLSLISGWKKLFGQKNLAEFLKNVIKLSAVALLLFMVLKGNQDKLINAMFLD 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 P + L ++ + I + D+ + + LRMS+Q+I+DE KQ EGDP Sbjct: 181 PSAIPELILSLSMRLLSVICIVTIVLATADLLWVKNQWRRDLRMSKQEIKDELKQMEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K R+R + R+ M+ADVPKA V++ NPTH++VAL+Y + P VVAKG L+A Sbjct: 241 LIKARLRSVALDRIRKSMIADVPKATVVIANPTHFAVALRYVREEGGTPVVVAKGTDLIA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 L+IREI +N+P +E PLAR+L+ E+ Q IP + Y A+AE++ ++ Sbjct: 301 LKIREIAEAHNIPIVEDRPLARSLHASVEVNQAIPAEFYRAIAEIIHYL 349 >UniRef50_Q1MQX2 Translocation protein in type III secretion n=6 Tax=Desulfovibrionaceae RepID=Q1MQX2_LAWIP Length = 360 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 101/351 (28%), Positives = 180/351 (51%), Gaps = 2/351 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS +S DKTE PTP +L +ARE+G + +S+++ + + + + L ++ Sbjct: 1 MSGDSGDKTEPPTPKKLREAREQGDVAKSQDVAAAMTMFGASLYFIGMWQDVFSNLLNLI 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 F H + + I + A L+P+I+ ++ +A+ + +M G++FS KS Sbjct: 61 ELPTKFIHLPFEE--ALPATISGIASIAFSILIPIIATLMFLAVAADLMQIGVLFSVKSA 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK LNP ++FS + E +K ILK ++ L ++ ++ + + + + Sbjct: 119 IPKLDNLNPKKWFSKVFSIKNLGEFVKNILKVSVLTITVWIILSNYIKELFAIASGNIWS 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 ++ L V + + D FQ + + K+ MS+Q+I+ E+K EGDP +K Sbjct: 179 LWYILGSVLRDLTLSVSMVFSVIACIDFMFQKWQYNKRQMMSKQEIKQEYKDMEGDPLIK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G+ +Q+ + A + + V KA V+V NP HY++A+ Y++ + P ++AKG GL+A R+ Sbjct: 239 GKRKQLHQEMAMQNPVNKVRKAKVVVVNPIHYAIAIDYEKGRTLLPVILAKGEGLLAQRM 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 + E +P ++ PLA +L+ IP L A VAEVL WV L + Sbjct: 299 VAVAQEEGIPVMQNIPLAHSLFMDGIEDSYIPRNLIAPVAEVLRWVNSLNK 349 >UniRef50_Q84CR0 Putative type III secretion protein n=3 Tax=Bordetella RepID=Q84CR0_BORPE Length = 349 Score = 333 bits (854), Expect = 8e-90, Method: Composition-based stats. Identities = 99/344 (28%), Positives = 169/344 (49%), Gaps = 2/344 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PTP RL +RE+G++ SR+ T ++ S+ L ++ A Sbjct: 2 SGEKTERPTPKRLRDSREKGEVAHSRDFTQTALICALFGHFLINAPSILASLRALILAPA 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F + + ++ +A+ L PLI V+ V + + + G+V + + L+P Sbjct: 62 AFADQGF--AVALGPVLTEILDQAVRVLAPLILIVLGVGMFAEFLQVGVVLAFRKLKPSA 119 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNP +K +FSA+ E +K++ K + + + + +M + Sbjct: 120 EKLNPAGNLKNIFSARNLMEFIKSVCKILFLAVLVTLVIRDSLQPLMAVPHSGLDGLRTG 179 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 ++ + + L + D+ +Q + + K LRMS+ +++ E+K+ EGDPH+K + + Sbjct: 180 VGRILQVMVWNIGLAYGAISLADLAWQRYQYRKGLRMSKDEVKQEYKEMEGDPHIKQQRK 239 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + + A V +A V+V NPTH +VAL Y + P+V+A G G VA + E Sbjct: 240 HLHQELIMHGAAAQVRRATVLVTNPTHLAVALYYAAGETPLPRVLAMGQGAVAALMVEAA 299 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 + VP ++ LARAL+ AE+ Q IPG+L VA VL V Q Sbjct: 300 RDAGVPVMQNVALARALHDQAEVDQYIPGELVEPVAAVLRAVRQ 343 >UniRef50_D1BCL3 Flagellar biosynthesis pathway, component FlhB n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCL3_SANKS Length = 422 Score = 332 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 134/354 (37%), Positives = 199/354 (56%), Gaps = 5/354 (1%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS +S +KTE TP R+++ R++G + RS++L++ L + ++ A Sbjct: 1 MSGGGDSGEKTEQATPKRMKQNRKDGALQRSQDLSAWLGIGAAAVMLPVALGRGAEAAVD 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 LSA + DP +++ + + + +L PL+ VVL A++ V GGL + K Sbjct: 61 QLSAVREIISNP--DPLVVVDLLGTGMDSILTSLTPLLVVVVLAAVVGNVSQGGLHVATK 118 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L+PKF N + GIK F Q + +KA+ KT++VG V + + P ++ S Sbjct: 119 KLKPKFDHFNLVKGIKNTFGGQALWQGVKALAKTLVVGLVLYIAIQNLMPVLLTAGGLSV 178 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + A + V I + D+ + + KK RMS+ +++ E KQSEGDP Sbjct: 179 GALLSAAGGGIQALLWSAVAAGIALAILDLVVVMKRNRKKTRMSKYEVKQENKQSEGDPQ 238 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +KG IR Q A +R RM+A V ADV++ NPTH +VAL+Y+ AP+VVAKGAG VA Sbjct: 239 LKGAIRSKQIAMSRNRMIASVGDADVVLVNPTHVAVALKYEAG-TGAPRVVAKGAGHVAA 297 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 RIRE+ AE +VP + PLARAL+ EIG++IP LYAAVA+VLA+V LKR Sbjct: 298 RIREVAAEKSVPMISDVPLARALHGACEIGEEIPADLYAAVAQVLAFVMALKRR 351 >UniRef50_Q2RZE8 Flagellar biosynthetic protein flhB n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZE8_SALRD Length = 353 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 196/351 (55%), Gaps = 2/351 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ + +K PTP RLEKARE+G + R+ E S+ +LL ++V GG S + L M Sbjct: 1 MSE-TQEKQYDPTPRRLEKAREKGNVLRATEPVSVGLLLTAMAVFSVGGASAFQSLQDMA 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + + P + + + + L PL +++ A+ ++ G S + Sbjct: 60 ARIFLRSARMSLTPASLQRLVAEIGAQVAGMLAPLFIVLIVAAVGLNMVQSGWNVSFTPI 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 QP+ S++NPL G+K++FS++ K +LK +VG + F + P+M+++ Sbjct: 120 QPQLSRVNPLEGLKQIFSSKGAFGFAKTLLKIGVVGPIAYFAMRPLIPEMVQVYTLPLPA 179 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + A D V++G++ + D F+ + + + L+MS++++ DE K++EGDP + Sbjct: 180 LLNQAADWFFALMWRVLMGLVVIAALDYAFERWKYYEDLKMSKKEMEDEQKETEGDPEFE 239 Query: 241 GRIRQMQRAAA-RRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 + R+ + A + RM V K+D +V NPTHY++AL+YD ++ AP+V+ KG ALR Sbjct: 240 EKRREKAKELAEQPRMDHAVMKSDAVVTNPTHYAIALRYDPDEAPAPRVLLKGVRKRALR 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 I+E+ AE +VPT E LA ALY + ++IP +LY AVA +LA V++ + Sbjct: 300 IKELAAEFDVPTFENRSLAHALYENVPEEEEIPEELYPAVAAILAEVYEQR 350 >UniRef50_B1Z5N7 Type III secretion exporter n=4 Tax=Burkholderia cepacia complex RepID=B1Z5N7_BURA4 Length = 352 Score = 330 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 184/345 (53%), Gaps = 2/345 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 SD+KTE PT +L+K REEGQ+ +S +L + L V V+ G LA L ++ + Sbjct: 2 SDEKTEEPTDKKLDKVREEGQVAKSSDLVEVASLGSIVLVLTAGQHYLADTLRAVVKEAI 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F H +L + ++ + +A+ L + + ++ A ++ GL S K++ PK Sbjct: 62 DFTHGPRELQDLSVA-LVHMGLQALGLLCGIAAVALVAAFLALAPQTGLKISLKAVMPKL 120 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 + ++P G +R+FS + +L+K ++K ++ +V + P + + +S + Sbjct: 121 ASVSPGSGFQRIFSMNSAIDLVKMVVKAAILVAVMWQTIKSAMPVVASALDQSVPQLIAV 180 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 ++ ++ + I + FD Q + ++K RMS+ +++ E K+S+G+P VKG + Sbjct: 181 LWSVLMHVVVVALGVFIAIGAFDYKLQKWLFIRKNRMSKDEVKREHKESDGNPEVKGERK 240 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 +M R ++ V +A+V+V NP HY+VAL+YD + P V+AKG ALR+R+ Sbjct: 241 RMAREMSQEGPKGGVSRANVVVVNPVHYAVALRYDPTEFPLPVVLAKGLDEQALRLRQQA 300 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 VP + PP+AR L++ + Q IP +L+ VA +L WV L Sbjct: 301 MHARVPIVANPPVARMLHK-VPLNQPIPEELFEVVAAILRWVDGL 344 >UniRef50_C1F996 Flagellar biosynthetic protein FlhB n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F996_ACIC5 Length = 409 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 124/391 (31%), Positives = 201/391 (51%), Gaps = 21/391 (5%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S ++TE +P R ++ARE+G IP SR+LTS +L G V+ + G R +G S L Sbjct: 2 SGERTEKASPRRKQEAREKGDIPHSRDLTSAAAMLAGTLVLGWAGPMWEARWAGSYSEML 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPL---ISGVVLVALISPVMLG-GLVFSGKSL 120 ++ +++ + M L PL A+++ V G G+ F+G+++ Sbjct: 62 DLSQPRSWLDGQMVEKMLAIRAAMMTVLWPLVVMFLACFAAAVLAGVAQGRGVQFAGEAI 121 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK +LNPL +++ FS++ +LK+ L + + P+ Sbjct: 122 APKIERLNPLTVLQQTFSSRGLTRMLKSALPVAALACFVAGKVRE--------QTAIPVF 173 Query: 181 AMGNAMDLVGLCALLVVLG---VIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 ++ L L+V + D + +S ++LRMS+Q++R+EFKQ+EG+P Sbjct: 174 SLTRLPSLFTSMYSLMVAAAAVLFVWSAIDYAVEWWSWEQRLRMSKQEVREEFKQTEGNP 233 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 V+ RI ++R R+ + ADV +A V++ NPTHY+VALQ+ M AP+V+AKG L+A Sbjct: 234 EVRRRIASIRRQLRRKALRADVSRASVVITNPTHYAVALQFSLELMEAPRVLAKGRDLLA 293 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW------QLKR 351 +I++ VP +E PPLARALYR E+GQ IP LYAAVA +LAW++ +L+R Sbjct: 294 EQIKQEARWAGVPLVENPPLARALYRQVEVGQSIPFALYAAVAAILAWLYRRDMEERLRR 353 Query: 352 WRLAGGQRPVQPTHLPVPEALDFINEKPTHE 382 + R E + +P + Sbjct: 354 QQQQEAARARTQDFSTQREEAQGMGTQPASQ 384 >UniRef50_B5JK52 FlhB/HrpN/YscU/SpaS family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JK52_9BACT Length = 369 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 101/353 (28%), Positives = 177/353 (50%), Gaps = 1/353 (0%) Query: 1 MSD-ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D + D KTE PT RL +E+G P+++E+ LL G+ V+ F G ++A Sbjct: 1 MADTDQDSKTEKPTAKRLTDEQEKGNFPQAQEVGVTFTLLAGLLVVMFSGQTIASNAFSF 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 S+ L SI N I +I P + ++ +I+ + F+ K+ Sbjct: 61 SSSILGNLSSIDLSTNNISYFFNEVIVVLGRLAAPFMLAGMVSGIIAGGLQTRFRFTPKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L KF+KLNP+ G K++ S +LK +G + + + + Sbjct: 121 LGIKFNKLNPINGAKQLVSKDVFVRFGIDLLKMGAMGLILWVAMRKIIKDPIFYAPIDIV 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 D + + + + V + +Q + K++M++++++ E K + P + Sbjct: 181 HVGMFITDTLVYVFIRLTIAVGLIAIISYLWQSKKTMDKMKMTKEEVKQERKDQDMSPEI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 + QM + +M+ +V ADV+V NPTHY+VAL+Y+ SAP V+AKG A R Sbjct: 241 RKARMQMAMRLMQGQMLDEVATADVVVTNPTHYAVALKYERGVDSAPMVLAKGENAFAQR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 I+E+ AE+ VP +E +AR LY+ A++G IP +++ +VAE+LA+V++ R+ Sbjct: 301 IKEVAAEHGVPVVENKMVARMLYKVAQVGAAIPMEMFQSVAEILAFVYKTHRY 353 >UniRef50_A8LMR4 Flagellar biosynthesis protein FlhB n=3 Tax=Rhodobacteraceae RepID=A8LMR4_DINSH Length = 362 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 113/361 (31%), Positives = 174/361 (48%), Gaps = 8/361 (2%) Query: 1 MSDES--DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSL----AR 54 MS++ DDK + +L AR++G++ +S +L + + + F G A Sbjct: 1 MSEDESPDDKPFEASEKKLLDARKKGELVKSTDLIATGSYGGLILGLVFAGAGTLTISAA 60 Query: 55 RLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLV 114 + G+L + + LI + AL +L A+ S V+ LV Sbjct: 61 TMQGLLREADTLAPELF--AGGASSISLTLILGTVGALSLWFFLPMLGAIASLVLQRALV 118 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 F+ L+PK ++++ L K F + E LK+ K ++ + G + M+ L Sbjct: 119 FAPTKLEPKLNRISILSNAKNKFGREGLFEFLKSTFKLVVFSILLGLLFMYELDTMISLA 178 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 A+ +G L+ LV L + + G D +Q HL+K RMSRQ++ DE K +E Sbjct: 179 AQPVSAIIGFVFYLLIEFLALVFLATLLIGGVDYIWQRAQHLRKNRMSRQEVVDETKSAE 238 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDPH K RQ A ++M+ADVP A V+V NPTHY+VAL++D +AP VVA G Sbjct: 239 GDPHSKQYRRQRAIEIATQQMLADVPDASVVVVNPTHYAVALKWDRFSPTAPIVVASGVD 298 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 VA IR+ E VP PP ARALY ++GQ+IP + AVA + + ++ Sbjct: 299 HVAAAIRQRAQEAGVPIHRDPPTARALYATCKLGQEIPRAQFKAVAAAIRFAEAMRAKAR 358 Query: 355 A 355 Sbjct: 359 K 359 >UniRef50_B9KJE4 Flagellar biosynthetic protein FlhB n=7 Tax=Rhodobacteraceae RepID=B9KJE4_RHOSK Length = 382 Score = 328 bits (841), Expect = 2e-88, Method: Composition-based stats. Identities = 130/383 (33%), Positives = 203/383 (53%), Gaps = 15/383 (3%) Query: 1 MS--DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+ D+ +KTE PT R E+ARE+G I S+E+ L G++++ L + G Sbjct: 3 MAEGDDGQEKTEEPTQKRREQAREDGSIVTSKEVFVFATLAGGLALLMMIEGLLPALVRG 62 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + + ++ ++ RE ++A L + ++ + L+ +GG+ FS K Sbjct: 63 WSGYLVIEPGADLERIAMV--RLGQAWREVLIAGLVVSVPLLALVLLVQSAMGGINFSTK 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +L K S++NP G+KRM S + EL KA+ K L+ V L + RL +P Sbjct: 121 ALSFKASRINPAAGLKRMVSLKALVELAKAVAKVALLIGVAVLVLRDELSPLDRLWTAAP 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A + +++ + + G D+ +Q +S ++MSRQ++++E K+S G P Sbjct: 181 GDAATVLGAGLIRLVSALLIVLAVIGGLDLVWQAWSLTNSMKMSRQELKEESKESNGSPE 240 Query: 239 VKGRIRQMQRAAA-----RRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 VKGR+R+MQ A+ RR + DVP+A IV NPTH++VAL+Y + AP ++A G Sbjct: 241 VKGRMRRMQMEASRNGARRRAALDDVPQATAIVTNPTHFAVALRYVPGETPAPVILAMGK 300 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 G +AL I E G + + TL P LARALY +IGQ+IP LY AVA VLA V++L R Sbjct: 301 GPMALDIIERGRKAGIGTLRIPLLARALYFTGDIGQEIPDGLYGAVAVVLAHVYRLDRGE 360 Query: 354 LAGGQRPVQPTHLPVPEALDFIN 376 A + + VPE L F Sbjct: 361 AA------EMPDVDVPEGLAFDE 377 >UniRef50_A9HH78 Putative flagellar biosynthetic protein flhB n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HH78_GLUDA Length = 358 Score = 327 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 119/352 (33%), Positives = 184/352 (52%), Gaps = 3/352 (0%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ S +K++ PT RLE AREEG + +SREL L IL + V ARR Sbjct: 1 MAEGSGGGEKSQDPTGKRLETAREEGNVAQSRELLMLAILGGFLLVFTMATADSARRFVA 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + SI D I + E +L PL+ +V + ++ G ++ + Sbjct: 61 HVGGTMEHFDSIPTDMTSIYRIAVQTALEGVLLAAPLVFTGFVVTIACGMLQTGFLYRPQ 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 ++ P ++L+P+ G++RMF E+LK++ K ++ G V S Sbjct: 121 AILPDITRLSPMRGLQRMFGMTNVVEMLKSLTKFVVFGVVLYAVAKGTLHVAPEAERWSM 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + + L+V+L + D + + + LRMS QDI+DEF+Q+EGDP Sbjct: 181 LRLVSELSSWFAYAVLVVLLVQCVIAILDDLWTRYHRIVGLRMSFQDIKDEFRQTEGDPK 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VKGR++QM+R ARRRM+ V A V++ NPTHY+VAL Y+ SAPK+VA G +A Sbjct: 241 VKGRLKQMRRRRARRRMLQAVKTATVVITNPTHYAVALSYESGADSAPKIVASGTDELAA 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 RIR + VP + PPLARAL+ + +IP + + VA ++A+V +LK Sbjct: 301 RIRHAAEDAKVPVVANPPLARALHA-LPLDSEIPSEYFQPVAAIIAYVMKLK 351 >UniRef50_C6QF02 Type III secretion exporter n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QF02_9RHIZ Length = 360 Score = 327 bits (838), Expect = 5e-88, Method: Composition-based stats. Identities = 118/357 (33%), Positives = 189/357 (52%), Gaps = 3/357 (0%) Query: 1 MSD-ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS+ + +TE T +L AR +G +P SRE+ + L L+ + VI G + A L + Sbjct: 1 MSEQDQQSRTEEATDKKLLDARNDGNVPSSREVPNFLYLMAALLVIAVLGQTFASHLGSL 60 Query: 60 LSAGLHFDHSI-INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 L L SI + + ++ ++ + A + P+I +I+ V + K Sbjct: 61 LVGLLANAGSIRLGNGGDVMLLFDVVGKAAAVVTAPIILAFGAAGVIASVAQNPPIPIAK 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + P S+L+P G+KRMFS E LK L+ ++V + L + W + P Sbjct: 121 RVIPDISRLSPAKGLKRMFSLSGLFEFLKLSLRLVVVVVTSVAILMYMWHDFTNSIWNDP 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + + V + + L ++ FD+ + LRM+RQ+I+DE KQ EGDP Sbjct: 181 SAILTLSQKSVVALLISLALMSFTLLIFDLPVAHVLWRRSLRMARQEIKDEQKQMEGDPL 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K R R + +A +R+RM+ V KA +++ NPTH++VAL+Y ++ AP+VVAKG L+AL Sbjct: 241 MKARRRSIAKARSRQRMLKGVSKATIVIANPTHFAVALRYVRSEGGAPRVVAKGQDLIAL 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 +IR I EN +P +E LAR+LY E+ Q IP + Y A+AE+L + Q +R R Sbjct: 301 KIRRIAEENAIPVIEDKALARSLYAKVEVDQMIPAEFYRAIAEILIRL-QARRNRQN 356 >UniRef50_A5P6J3 Type III secretion exporter n=2 Tax=Erythrobacter RepID=A5P6J3_9SPHN Length = 387 Score = 327 bits (838), Expect = 6e-88, Method: Composition-based stats. Identities = 124/378 (32%), Positives = 204/378 (53%), Gaps = 8/378 (2%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS+++ +K APT RL A ++G + RS++ + ++L G + + G L L+ + Sbjct: 1 MSEDTPGEKNFAPTEKRLADAAKKGDVLRSKDAGTAAVMLFGGAWLALAGPWLLEGLTDL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 FD S + D + + G +I + + A+ L V++V L S + G + + Sbjct: 61 ARDAFLFDASDLRDFS-VQGLLIEGLLLGVPAVFALAVPVIVVTLFSQLAFGRGRWVTDN 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+ K ++NP+ G+KRMF Q E+ K +LK L+GS+ + W+ ++ L + Sbjct: 120 LKAKGQRINPMSGLKRMFGMQGLIEMGKGLLKIALLGSIAAAWWWNSMDVVIGLGRGNLS 179 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + A + + G++ + D+ Q K+L+MS Q++RDE K+SEG P + Sbjct: 180 AQLTAAWRAIVSLVFALSAGLVVIAFVDLPIQWLRQQKRLKMSHQEMRDENKESEGSPEM 239 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 + RQ QR A + + +A ++ NPTH++VAL YD + SAP ++AKG G AL Sbjct: 240 RAARRQRQRDIATGSVAGAMREAQFVIANPTHFAVALTYDPARASAPILLAKGRGDKALA 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 ++E+ +E ++PTLE P LAR++Y Q I LY+AVA V+A+V+ LKR G+ Sbjct: 300 MKELASELDLPTLEMPQLARSVYYTTRERQIICEDLYSAVASVIAYVFSLKR-----GET 354 Query: 360 PVQPTHLPVPEALDFINE 377 P PT + VP AL F E Sbjct: 355 PPLPT-VEVPAALHFDTE 371 >UniRef50_C4PLU4 Type III secretion system inner membrane protein n=14 Tax=Chlamydiales RepID=C4PLU4_CHLTZ Length = 360 Score = 325 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 93/350 (26%), Positives = 163/350 (46%), Gaps = 1/350 (0%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLH 65 +KTE TP RL AR++GQ+ +S++ S + +V + + + A L L + Sbjct: 2 GEKTEKATPKRLRDARKKGQVAKSQDFPSAITFIVSMFLTFSLASFFAEHLGSFLVSIFK 61 Query: 66 FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFS 125 +DP+L + + + + LPL+ V V L+ ++ G FS + +P Sbjct: 62 -TAPQNHDPHLAVYYLKNCLILILTVSLPLLGAVGFVGLLIGFLIVGPTFSTEVFKPDLK 120 Query: 126 KLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNA 185 K NP+ +K+ F +T ELLK+I K + L + ++ P+ Sbjct: 121 KFNPIDNLKQKFKVKTFIELLKSIFKISGAALILYIVLKNRVELVIETAGIPPLVTAQVF 180 Query: 186 MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQ 245 +++ + + + + D+ +Q S K+L+M + +++ EFK +EG+P +KGR RQ Sbjct: 181 KEILYKAVTSIGIFFLVVAVIDLVYQRHSFAKELKMEKFEVKQEFKDTEGNPEIKGRRRQ 240 Query: 246 MQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGA 305 + + A + + A +V+NP +VA+ Y K AP ++A G L A RI Sbjct: 241 IAQEIAYEDTSSQIKHASAVVSNPKDIAVAIGYMPEKYKAPWIIAMGVNLRAKRIIAEAE 300 Query: 306 ENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 + VP + PLA L + + IP Y AV E+L ++ L L Sbjct: 301 KYGVPIMRNVPLAHQLLDEGKELKFIPETTYEAVGEILLYITSLNAQNLE 350 >UniRef50_A0LT73 Type III secretion exporter n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LT73_ACIC1 Length = 391 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 137/373 (36%), Positives = 201/373 (53%), Gaps = 13/373 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D S KTE PT +L++AR EG++ RS E+ + L LLVG+ ++ + Sbjct: 1 MADRSQ-KTEKPTQRKLKEARREGRVARSPEVGAWLGLLVGIFLVHLTMTRTTAAFRQAI 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + DPNL + + + +A PL ++L AL + V GGL S K+L Sbjct: 60 DGLTQVIRTP--DPNLAVHVLGTSLASGAVAAAPLAGAILLTALGASVAQGGLRLSAKAL 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK+ LNPL G KRMF + G E KA+ KT L+ L+ ++ L +T Sbjct: 118 APKWQSLNPLNGWKRMFGPRGGWEAAKALAKTGLLA----LILYDTMRGLVPLTTTGTVT 173 Query: 181 AMGNAMDLVGLCALL----VVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 + + G L + + + D +Q+ H LRM++ ++++E + +EGD Sbjct: 174 PLQGVVHTAGSAVLRFARDAAVAGLLLAFLDYAYQLRRHRASLRMTKHEVKEELRTTEGD 233 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P ++ IR Q A RRRM+ DV ADV+V NPTH +VAL+Y AP +VAKGAG V Sbjct: 234 PRIRSAIRVRQMALRRRRMIRDVATADVVVVNPTHIAVALRYTPGS-GAPTIVAKGAGAV 292 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL-KRWRLA 355 A RIR+ + VP +E PLARALYR ++GQ+IP +L+ AVA VLA+V+ L KR R+ Sbjct: 293 AARIRDEAIRHRVPLVEDIPLARALYRICDVGQEIPRELFVAVARVLAFVFSLKKRGRVG 352 Query: 356 GGQRPVQPTHLPV 368 G RP + + Sbjct: 353 GVHRPRPTPAVEL 365 >UniRef50_Q01PP8 Type III secretion exporter n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PP8_SOLUE Length = 354 Score = 320 bits (820), Expect = 6e-86, Method: Composition-based stats. Identities = 122/356 (34%), Positives = 188/356 (52%), Gaps = 2/356 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D+S KTE PT RLEKAR EGQ P ++E S L +V + ++ GG ++L Sbjct: 1 MADKSG-KTEQPTQRRLEKARTEGQFPAAKEFVSALQFMVFLGLLGSGGAGWFKQLRQTT 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + + P ++ + + ++ +L L+ V + + + S K L Sbjct: 60 RSLFGLAFAPELRPEDLIHVMWQIFQQLLLPLVMAGVAVAVATVAFRLATTRFGISFKKL 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 P ++ NPL +K + QT L +A + M L +S + Sbjct: 120 MPDAARFNPLSRLKDL-PKQTLPALAQAAFLLPVFLWAVWVVGQEKLDAFMALPMQSVES 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 M + + + D+ Q+ H +LRMS+Q+IR+E K EG+P +K Sbjct: 179 GMNLICASLMELFWKAAGVFLLVGCVDLARQLQRHKSELRMSKQEIREEMKDVEGNPQMK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIR++QR R++MM DVP A +V NPTHY+VA++Y + M+AP VVAKG +ALRI Sbjct: 239 ARIRRLQRDRVRKQMMKDVPTATAVVVNPTHYAVAIRYQMDGMAAPMVVAKGMNHLALRI 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 R+ E+ VP +E PPLA+ALY+ E+GQ+IP LY AVAE+LA++++L R+ G Sbjct: 299 RQKATEHQVPIIENPPLAQALYKSVEVGQEIPPHLYRAVAEILAYIFKLMNGRMPG 354 >UniRef50_C6N718 Putative flagellar biosynthetic protein FlhB n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N718_9GAMM Length = 361 Score = 320 bits (820), Expect = 6e-86, Method: Composition-based stats. Identities = 104/349 (29%), Positives = 178/349 (51%), Gaps = 1/349 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE TP++L+KA+E+GQ+ +S ELT+ + LLV + ++ + ML L+ Sbjct: 13 EKTEKATPYKLQKAKEKGQVSKSAELTTCISLLVLLGMMSALWPKQLHEIQEMLRHILYL 72 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + + I ++ + + LP VL +++ + G+V+S L P F + Sbjct: 73 AAQMQFSLDNINHLHQFILMQLLHQWLPFALAGVLAIILANLTQSGIVWSTTPLVPDFKR 132 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LN + G K++FS +T E K+ LK + F H ++ L G M Sbjct: 133 LNIVQGFKKLFSIKTCFEAAKSTLKLMSTFIFLFFAFKHQLTNILPLALTPTAQHPGLMM 192 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 + ++L + + D F+ + K RMS+Q+++DE+KQ EGDP +K +I+Q+ Sbjct: 193 HFLLSLIFQLLLLLSLLAVLDKFYTRWKFAKDQRMSKQEVKDEYKQREGDPKIKSKIKQL 252 Query: 247 QRAAARRRM-MADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGA 305 Q+ ++ + V ADVI+ NPTH ++AL+YD M APKVV K G + +++E+ Sbjct: 253 QQQLRQKTASLKQVKTADVIITNPTHLAIALKYDRTSMPAPKVVCKAQGEMVSQVKELAR 312 Query: 306 ENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 ++ VP +E AR LY E+ Q I +LY A + ++ +R Sbjct: 313 KHGVPIIENKSFARLLYHSVELNQWINKELYPFAAAIFKEIYARRRKEQ 361 >UniRef50_O85640 Secretion system apparatus protein SsaU n=26 Tax=Enterobacteriaceae RepID=O85640_ECOLX Length = 345 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 88/345 (25%), Positives = 172/345 (49%), Gaps = 8/345 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS +KTE PTP +L +++G + +S E+ + + L+ S G+S + G++ Sbjct: 1 MS----EKTEKPTPKKLRDLKKKGDVTKSEEVMAAVQSLILFSFFSLYGMSFFVDIVGLV 56 Query: 61 SAGL-HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + + + + ILG ++ + +L +LP+ V + + + V G +F+ + Sbjct: 57 NTTIDSLNRPFLYAIREILGAVLNIF---LLYILPISLIVFVGTVTTGVSQIGFIFAVEK 113 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++P K++ +K +FS ++ ELLK++ K +++ + F + + + Sbjct: 114 IKPSAQKISVKNNLKNIFSVKSIFELLKSVFKLVIIVLIFYFMGHSYANEFANFTGLNAY 173 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ V L V+ G + FD +FQ LKK++MS+ +++ E K ++G+P + Sbjct: 174 QALVVVAFFVFLLWKGVLFGYLLFSVFDFWFQKHEGLKKMKMSKDEVKREAKDTDGNPEI 233 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KG R++ + ++ K+ VIV NPTH ++ L Y + P V+ G AL+ Sbjct: 234 KGERRRLHSEIQSGSLANNIKKSTVIVKNPTHIAICLYYKLGETPLPLVIETGKDAKALQ 293 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLA 344 I ++ ++P +E PLAR LY++ GQ I + VA+++ Sbjct: 294 IIKLAELYDIPVIEDIPLARTLYKNIHKGQYITEDFFEPVAQLIR 338 >UniRef50_Q04SD5 Endoflagellar biosynthesis protein n=4 Tax=Leptospira RepID=Q04SD5_LEPBJ Length = 510 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 97/332 (29%), Positives = 171/332 (51%), Gaps = 5/332 (1%) Query: 23 EGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQII 82 +G +P+S EL + ++LL GV +I+ G R +L +H + + + +++ Sbjct: 179 KGNVPKSPELPAAVVLLAGVILIYLMGEYFFMRTFYILRKYIHGVGQRTDISSESVTELL 238 Query: 83 LLIREAMLALL-PLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMF-SAQ 140 + LL PL+ + A+I V G +F+ ++L FS++ P K++ + Q Sbjct: 239 KNASTDLFTLLWPLLGITFVGAVIGNVAQVGFIFTPRALSFNFSRIRP--NFKKVLPTRQ 296 Query: 141 TGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGV 200 T L K++ K L+ V+ + + ++ A+ M L+V + + Sbjct: 297 TLFNLGKSLAKVGLIAWVSYIIISKDFFSILISGEMGLEQAVALVMSSSFKIFLVVGIIL 356 Query: 201 IPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRR-MMADV 259 + + D +Q + + + L+M+ + + E K+S+GD ++ R RQ+ R +R M+A V Sbjct: 357 LAISIVDYLYQRYEYEESLKMTPSEAKREAKESDGDRSLQARRRQLARDMMNKRKMLAKV 416 Query: 260 PKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLAR 319 P+ADV++ NPTH++VAL+Y AP V+AKG AL I I EN VPT+E AR Sbjct: 417 PEADVVITNPTHFAVALEYKPGIHKAPIVIAKGVDDFALLIIRIARENGVPTVEDRIQAR 476 Query: 320 ALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 LY E+G ++P Q Y A+A +L+ + +R Sbjct: 477 GLYEEVELGAEVPQQFYRAIATILSRLESFRR 508 >UniRef50_Q28JK7 Flagellar biosynthetic protein FlhB n=1 Tax=Jannaschia sp. CCS1 RepID=Q28JK7_JANSC Length = 362 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 106/362 (29%), Positives = 172/362 (47%), Gaps = 5/362 (1%) Query: 1 MSDES---DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 MSD+ DK TP +LE AR++G+I RS++L + ++ + L + L Sbjct: 1 MSDDDTSPGDKPFDATPKKLEDARKKGEIVRSQDLNTAVMYAGFLLSGAILAPWLVQNLG 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQ--IILLIREAMLALLPLISGVVLVALISPVMLGGLVF 115 + L I G I L+ +++A ++ + LIS + L+F Sbjct: 61 QLTQTTLGQAEVIAPLMLGPGGDGPAIGLLSGSLIASAAIVLVPAGLLLISLLAQRALLF 120 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 + L PK ++L+P+ K+ + +Q + K+ +K LV +LW ++ + Sbjct: 121 TPSKLMPKLNRLSPISNAKQKYGSQGLFQFAKSAVKLALVSIFLAIYLWARAETILASLY 180 Query: 176 ESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 + + L ++V + D F++ + RM+RQ++ DE K +EG Sbjct: 181 GTAGQLLELLGRLSLDFLMVVAGMTGIIGIIDWFWEWSQLQLRNRMTRQEVMDESKSAEG 240 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DPH+K + R + A +M+ DVP ADV+V NPTHY+VAL++D P VAKG Sbjct: 241 DPHIKQQRRARGQGIAMNQMLGDVPNADVVVVNPTHYAVALKWDRAGGGVPICVAKGVDD 300 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 VA RIRE +E VP PP ARAL+ E+G I Y AVA + + ++ +A Sbjct: 301 VARRIREAASEAAVPIFSDPPTARALHASIEVGAAIQPDQYRAVAAAIRFADLMRSKAVA 360 Query: 356 GG 357 Sbjct: 361 RA 362 >UniRef50_C5CXN4 Type III secretion exporter n=1 Tax=Variovorax paradoxus S110 RepID=C5CXN4_VARPS Length = 365 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 107/358 (29%), Positives = 200/358 (55%), Gaps = 1/358 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+++ D+ EA TP++L++ARE GQ +S ++ + L+ V V + + G Sbjct: 1 MAEQDLDRNEAATPYKLQRARERGQAAKSTDVVAALVFGVAVVYLTWRGFGAVASQFRFD 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 A L + + I +R A+ P + ++L A++ +M G + S + + Sbjct: 61 QALLIHAGRMDPSGVGLWPLIERALRSALTLAAPFFAAIMLAAIVGNMMQTGPILSFEPV 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + F+++NP+ G+K++FS + + +AI+K L+G V L Q L + SP+ Sbjct: 121 KMDFTRINPVNGLKKLFSMRVLFDTARAIVKLALLGLVAFLALEALASQFYALASLSPVG 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + +D + L + L + + D+ + KK+RMS+++++DE K EGDP ++ Sbjct: 181 YLRTLLDDLASVGLKMALVLTLIALLDLMYTRREFAKKMRMSQRELKDEAKHREGDPRIR 240 Query: 241 GRIRQMQRAAARRRM-MADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 R+R+++R +R + + AD+++ NPTH +VAL+Y+ +M++P+++AKGAG +A Sbjct: 241 ARLRELRRETLKRSLALRQTRNADMLITNPTHLAVALKYEHGRMASPQLLAKGAGHMAAA 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 +REI A + +P ++ PPLAR LY+ + +P +LYA VA ++ WV+ ++ RL G Sbjct: 301 MREIAARHRIPVVQNPPLARRLYKELPVDHSVPPELYAQVARIIVWVFAMREQRLGRG 358 >UniRef50_B0SDH0 Endoflagellar biosynthesis protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SDH0_LEPBA Length = 444 Score = 317 bits (814), Expect = 3e-85, Method: Composition-based stats. Identities = 97/334 (29%), Positives = 179/334 (53%), Gaps = 10/334 (2%) Query: 24 GQIPRSRELTSLLILLVGVSVIWFGGVSLARR----LSGMLSAGLHFDHSIINDPNLILG 79 G +P+S E+ S ++LL G V++ G + + + L G+H + + +IL Sbjct: 112 GNVPKSNEVASTMVLLGGTGVLFLLGDTFIKNTAIFIKKYLPMGMHHERFGAEEFRVILS 171 Query: 80 QIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMF-S 138 + ++ L P+++ ++ A++ V+ G +FS ++L +F +++P KR+ + Sbjct: 172 GV---SKDFFNLLWPVLAITLVFAIVGNVVQVGFMFSPRALSFRFDRISP--NFKRVLPN 226 Query: 139 AQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVL 198 QT L+K++ K +L+G ++ + + +++ + A+ + L Sbjct: 227 RQTLFNLVKSLAKVVLIGVISYILISGDFLKVLLTGNMGMMQAITLVTYSGFKIMMAAGL 286 Query: 199 GVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMAD 258 ++ + D FFQ + L+ + + + E K+ GDP +K R Q+ R + M+ + Sbjct: 287 LLLGIAVADFFFQKSEFEESLKQTPSEAKREMKEDSGDPVMKNRRMQLARDMMQGNMLRE 346 Query: 259 VPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLA 318 VPKADV++ NPTHYSVAL Y+ + SAP+V+AKG +AL IR I EN+VP +E+P A Sbjct: 347 VPKADVVITNPTHYSVALSYEMGRDSAPRVIAKGENRLALEIRRIARENDVPIVESPKQA 406 Query: 319 RALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 R LY E+G +IP + + AV ++L + + K+ Sbjct: 407 RLLYAQVEVGDEIPQEFFQAVVQILITLEKFKKK 440 >UniRef50_Q12T86 Type III secretion exporter n=1 Tax=Shewanella denitrificans OS217 RepID=Q12T86_SHEDO Length = 352 Score = 316 bits (811), Expect = 7e-85, Method: Composition-based stats. Identities = 106/355 (29%), Positives = 199/355 (56%), Gaps = 5/355 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSDE K+E + ++L +AR+ GQ+ +S EL + +++L+ ++ + SLA+ L ++ Sbjct: 1 MSDE--HKSEQASQYKLNEARKRGQLAKSMELNAWVLVLISLAYFYLFSESLAKELMSVI 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 S L S+ N +L + + L+P S +V+ +++ V+L G VFS + L Sbjct: 59 SRYLQILGSVDIRNNFMLIAF-DIFYPLAVLLVPFFSILVVASIVINVLLNGFVFSFEPL 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PKF KLNP+ G+K++FS + E +K +K LV + +++ + Sbjct: 118 SPKFEKLNPVKGLKKIFSKKNLFEFIKQTIKLFLVALCGYLLFYGVVERLIIASQSHVSS 177 Query: 181 AMGNAMDL-VGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 +G A+ + ++L + P++ DV F + K++ MS +++R+E+K+ EGDP + Sbjct: 178 LLGMALSQETLRLSFYLLLTIFPLIALDVLFTRWDFKKQMMMSHREVREEYKKKEGDPQI 237 Query: 240 KGRIRQMQRAAARRRM-MADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 K + +++Q+ A++ + + V +ADVI+NNPTH SVAL++D M++P VVA G+G++ Sbjct: 238 KSKRKEVQKELAKKLIALGKVKEADVIINNPTHISVALKFDPLTMNSPIVVASGSGVLGK 297 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 IR I ++++ + LAR LY+ IGQ +P + + +A + + + + Sbjct: 298 FIRRIAVKHSLLQVTNISLARRLYKQLAIGQPLPAEYFDELAPIYRKILGMDSKK 352 >UniRef50_A3NKX0 Type III secretion protein, YscU/HrpY family n=25 Tax=Burkholderia RepID=A3NKX0_BURP6 Length = 352 Score = 316 bits (811), Expect = 8e-85, Method: Composition-based stats. Identities = 95/342 (27%), Positives = 178/342 (52%), Gaps = 2/342 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 SD+KTE PT +L AR +G++ RS +L+ + + + ++ + +++ L Sbjct: 2 SDEKTEEPTDKKLRDARRDGEVSRSTDLSDAVSMSAAILLLVAAADHFGDAMRALVNGAL 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F + + + ++ A+ A++PL+ L + V+ GL S K + P Sbjct: 62 AFVSADHSLVE-MTARLYQFGGIALSAVMPLLFVAALAGIGGSVLQVGLQISLKPVMPNL 120 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 LNP G+K++FS ++ E +K I+K ++V V + +P + + +SP Sbjct: 121 GALNPAEGLKKLFSPRSAIESIKMIVKAVIVFCVAWKTIVWLFPLIAGALYQSPPELSRI 180 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +++ ++V + M DV Q F ++K++M++ +++ E K EGDP +KG + Sbjct: 181 FREILAKWLMVVAGLCLLMGAADVKLQRFMFMQKMKMTKDEVKRESKNDEGDPLLKGERK 240 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 ++ R A V A+ +V NPTHY+VA++Y ++ P+VVAKG A+ +R Sbjct: 241 RLARELAAAPPQHQVAHANFVVVNPTHYAVAVRYAPDEHPLPRVVAKGLDEAAIALRRAA 300 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 + N+P + PP+ARAL+R + + +P +L+ VA +L W+ Sbjct: 301 QDANIPIIGNPPVARALFR-IGVEEPVPEELFEIVAAILRWI 341 >UniRef50_C3XFW9 Flagellar biosynthesis protein FlhB n=3 Tax=Helicobacter RepID=C3XFW9_9HELI Length = 372 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 108/353 (30%), Positives = 189/353 (53%), Gaps = 3/353 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M++E +KT AP+ +++KAREEG + +S +L L+ L+VG+ +++ + G+ Sbjct: 1 MAEE--EKTHAPSQRKIQKAREEGSVAKSPDLVGLVGLVVGLMLLFIIFPFWVKIFKGLY 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 N + I + +++ A L +P +++ +I V G + S K + Sbjct: 59 VECTKLFLVDFNM-HTIFAITLTILKVAALCAMPFFFALMVAGIIGNVAQFGFLLSFKII 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PK K+NP+ G K +FS + + LK + +V F ++ + Sbjct: 118 KPKVDKINPIKGAKNLFSLKKLLDGFIITLKVFIAFAVGFFIFVGFLDEVANISMSPLKE 177 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + ++ + M D + + ++K LRMS+Q+++DEFKQ EG+ VK Sbjct: 178 QLTWFYQKALILIGALLFLFLVMGILDFLIKRYQYIKSLRMSKQELKDEFKQQEGNQEVK 237 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +IRQ+ A +MM+ +P A+V+V NPTHY+VAL+++ SAP VVAKG +A+RI Sbjct: 238 AKIRQIMMKNAMNKMMSAIPSANVVVTNPTHYAVALRFNSETESAPVVVAKGIDHLAVRI 297 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 + I E+ + +E PPLAR LYR ++ + IPG+++ AV E+ V +L+ R Sbjct: 298 KGIAREHEILIIENPPLARELYRLVDVDRMIPGEMFEAVVELFQQVAKLEAER 350 >UniRef50_A6GN26 Type III secretion component protein SctU n=1 Tax=Limnobacter sp. MED105 RepID=A6GN26_9BURK Length = 353 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 98/353 (27%), Positives = 167/353 (47%), Gaps = 5/353 (1%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PT +L+ AR++GQ+ S++ L LL+ ++ A R S +L + Sbjct: 2 SGEKTEKPTQKKLDDARKKGQVSVSKDAQILFKLLMFYMFFFWLSQDYAARFSELLDLIV 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLAL-LPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 + + P I + + +A+ +PL++ + A + G + S ++L P Sbjct: 62 T---AGLKQPWTFSESIFSMFFDLFVAITVPLVAVCAIAATLITWAQIGFLVSPEALTPS 118 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG 183 F K + + IK MFS ++ +LL +I+K +++ V + M+ Sbjct: 119 FKKFDAVSNIKNMFSKKSLVQLLLSIVKVLILSVVGYLVFKDNMGDMIYSYRAGLTQFFD 178 Query: 184 NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRI 243 + ++ + ++ + + D + H+K LRMS QDI DE KQS G+P +K R+ Sbjct: 179 VLVHVLKAIIFVSLIIFMVIAVIDWSVEYMHHIKNLRMSHQDIADERKQSMGNPQLKQRM 238 Query: 244 RQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREI 303 ++ R+ + V A IV NPTH SVAL Y+ K P ++A G ALRIRE Sbjct: 239 KREHRSIL-NSSLTRVAGAKAIVANPTHISVALDYEPGKHDLPYILAMGTDDEALRIREF 297 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 +N +P + LAR LY+ E + I + A+V V ++ + G Sbjct: 298 AKKNGIPIIVNVKLARMLYQDCEEDEYIQREHLELAAQVFRAVMEMASDQDKG 350 >UniRef50_A1B5B9 Type III secretion exporter n=3 Tax=Rhodobacterales RepID=A1B5B9_PARDP Length = 368 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 116/364 (31%), Positives = 179/364 (49%), Gaps = 3/364 (0%) Query: 1 MS-DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS + +DDK T +L KAR+EG +PRS EL S L+ L F + GM Sbjct: 1 MSRENNDDKQFDATESKLRKARQEGDVPRSAELQSALMYLGFWFAALFATIWAVPAWLGM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + L + + + L +A L + ++ + L L+ V +V + K Sbjct: 61 AARVLGGEPWPDAEGRAVADLARALAGQAGLVTVAGVAIMALPILLGMVAQRSVVLTPKK 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P F ++NP+ + F ++ K +LVG V G+FL+ + Sbjct: 121 LLPDFKRVNPVKNAAQKFGKSGLVTFAISLGKALLVG-VGGWFLYASLLAWLMTSGAMRD 179 Query: 180 TAMGNAMDLVGLCALLVVLGV-IPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + L+ A+L+ LG+ D+ ++ +LK+ RMSRQ+++DE K++EGDPH Sbjct: 180 LQWVEGLGLILRRAVLLALGIGAIFAIIDLIWKRLEYLKRHRMSRQEMQDEHKENEGDPH 239 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K RQ M+ADV KADVI+ NPTHY+VAL++ AP +AKG VA Sbjct: 240 LKAARRQKGVDIVLSAMLADVQKADVIIVNPTHYAVALEWKRGSGRAPVCLAKGVDDVAR 299 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 RIRE ++ VP PP ARAL+ EIGQ+I + +A VA + + +++ G Sbjct: 300 RIRERAQDHRVPIWSDPPCARALHATVEIGQEIKAEHFAPVAAAIRFAEAMRKKAREGWG 359 Query: 359 RPVQ 362 P + Sbjct: 360 SPPR 363 >UniRef50_O83710 Flagellar biosynthetic protein flhB n=4 Tax=Treponema RepID=FLHB_TREPA Length = 376 Score = 313 bits (802), Expect = 8e-84, Method: Composition-based stats. Identities = 102/362 (28%), Positives = 188/362 (51%), Gaps = 11/362 (3%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 + E + ++E PT +L KAREEG++P+S++L ++L + ++ + R G+L Sbjct: 21 AAEDEGRSEDPTETKLRKAREEGRVPKSQDLNGAFVMLFTSTSLFLLAPFILRECIGVLR 80 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGG-LVFSGKSL 120 + G + +R M LP+ ++ + + ++ ++FS KS+ Sbjct: 81 FFFTRATTASIQN---TGWFFVFVRYFMKLALPISFVALVSGVAANIVQNKTVLFSVKSI 137 Query: 121 QPKFSKLNP--LPGIKR-MFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 +P+F K++P + KR FS + LLK+++K + V+ F + + + L+ S Sbjct: 138 RPQFKKISPDVIRFFKRSFFSTEGLFNLLKSLIKITAIFFVSYFTIRNDLFMFVSLLGVS 197 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 ++ L G L V L ++ D FFQ + L+MSRQ++++E K+ EGDP Sbjct: 198 LTQSIFYITSLAGKVLLEVSLLLVVFSLPDYFFQRRQFIDSLKMSRQEVKEELKEQEGDP 257 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 V+ +R+ ++ R + ADV++ NPTH++VA+QY+ M+AP VVAKG+ A Sbjct: 258 LVRSYVRKQMQSLVRESAR-NTTDADVVITNPTHFAVAVQYEPAYMTAPTVVAKGSDGTA 316 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 RI+ + E + E PLARALY IG+++P + + A+ + +L +++ Sbjct: 317 YRIKRLAKEAGILIEENKPLARALYTQVAIGREVPYEYFNALVLIFT---KLDKFKTHAQ 373 Query: 358 QR 359 ++ Sbjct: 374 RK 375 >UniRef50_P35652 Hypersensitivity response secretion protein hrcU n=8 Tax=Proteobacteria RepID=HRCU_RALSO Length = 357 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 115/363 (31%), Positives = 183/363 (50%), Gaps = 9/363 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 SD+KTE PT +LE A +G+ +S +LT+ +LL G ++ R +L L Sbjct: 2 SDEKTEQPTDKKLEDAHRDGETAKSADLTAAAVLLSGCLLLALTASVFGERWRALLDLAL 61 Query: 65 HFDHSIINDPNLILGQII-LLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 D S P + L Q I + +L LP+ LVA I+ G+V S K ++ K Sbjct: 62 DVDSS--RHPLMTLKQTISHFALQLVLMTLPVGFVFALVAWIATWAQTGVVLSFKPVELK 119 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG 183 S +NP G+KR+FS ++ +L+K I+K + V + + P ++ +S + Sbjct: 120 MSAINPASGLKRIFSVRSMIDLVKMIIKGVAVAAAVWKLILILMPSIVGAAYQSVMDIAE 179 Query: 184 NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRI 243 M L+ + + D Q + ++ RMS+ +++ E K SEGDPH+KG Sbjct: 180 IGMTLLVRLLAAGGGLFLILGAADFGIQRWLFIRDHRMSKDEVKREHKNSEGDPHIKGER 239 Query: 244 RQMQRAAARR-RMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 +++ R A + V A +V NPTHY+VA++Y + P+++AKG AL +RE Sbjct: 240 KKLARELADEAKPKQSVAGAQAVVVNPTHYAVAIRYAPEEYGLPRIIAKGVDDEALALRE 299 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQ 362 A +P + PPLAR+LYR ++ +P L+ VAEVLAWV ++ A G + Sbjct: 300 EAAALGIPIVGNPPLARSLYR-VDLYGPVPEPLFETVAEVLAWVGEM----GASGTPGAE 354 Query: 363 PTH 365 P H Sbjct: 355 PQH 357 >UniRef50_Q1IR59 Type III secretion exporter n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IR59_ACIBL Length = 351 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 180/348 (51%), Gaps = 5/348 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D S KTE PT R +KARE+GQ+ RSREL L ++V + I G Sbjct: 1 MADSS--KTEQPTQQRRKKAREKGQVARSRELPGALTIIVVLVWILSLNSVALFTWRGFY 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + L + L Q + A ++P++ + A S ++ GG VFS ++L Sbjct: 59 RSLLQQAALQELTLSPALLQ-KTIWVAAQWTVVPMLGAFAI-ATASTLLQGGFVFSSEAL 116 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 K +L+P +K++FSA + LK++L + + + W +RL Sbjct: 117 AWKPERLSPGHRLKQIFSAAGLSNTLKSLLPFAAILWLAVSQIRSEWVTFIRLGGLPVAR 176 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + L ++ D Q L+MSR++I+ EFK+SEG+P VK Sbjct: 177 IGSWLLAQCVALVWKCCLVLLLWSALDYLLQRQRLEGDLKMSREEIKQEFKESEGNPQVK 236 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +IR+MQR R++M+ V A V+V NPTHY++AL+Y + +AP +VAKG +A I Sbjct: 237 AKIRRMQRQVRRQQMLHAVKAATVVVTNPTHYALALEYRPD-FAAPVLVAKGLDRLAEEI 295 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 +++ + +P +E LA ALYR E+GQ IP +L+ AVAEVLA V++ Sbjct: 296 KQVAIWHEIPLVENRALAHALYRSVEVGQAIPSKLFTAVAEVLAAVYR 343 >UniRef50_C6XFL0 Flagellar biosynthesis protein FlhB n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFL0_LIBAP Length = 354 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 102/353 (28%), Positives = 190/353 (53%), Gaps = 3/353 (0%) Query: 1 MSDES--DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVS-VIWFGGVSLARRLS 57 MS+ D+KTEAP+ ++E A EG P SRE + +L + +++F + S Sbjct: 1 MSENDAPDNKTEAPSSKKIEDALNEGNAPISREASLFSSILACLIYLLFFFSPGIYSVTS 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 + + D + I+ + L A ++P + ++ + S ++ V + Sbjct: 61 DLHVLLASATQRKLEDISHIVFLLTHLSLSASRLVIPGLLLFMMFGIGSYLIQRIPVLNL 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 ++P F +++ GIKR++S +K+ +K ILVG++ L ++ M+ ++ + Sbjct: 121 NHVKPSFKRVSLREGIKRIYSINNLVNFMKSFVKIILVGTIITISLTENYFTMLDFISAN 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 P + + +A V ++++L + + D+ + KL+MS+Q+I+DE KQS G+P Sbjct: 181 PHSILYHAFFTVRKVLIMILLFIATLTVLDIGWSYHQWYSKLKMSKQEIKDEIKQSYGNP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K R + + R+ R +MM +A +I+ NPTHY++AL+Y + + AP +VAKG L+A Sbjct: 241 IIKNRQKSIARSRIRHKMMEATSRATIIITNPTHYALALRYIQTENDAPVLVAKGQNLIA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 ++R+I E+N+P E P LAR+L++ I IP Y AVA+++ ++ K Sbjct: 301 KKMRKIAYEHNIPIFEEPSLARSLFKQVPINSAIPPVFYKAVAQLIYKIYHKK 353 >UniRef50_C0AA48 Type III secretion exporter n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AA48_9BACT Length = 369 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 112/353 (31%), Positives = 178/353 (50%), Gaps = 1/353 (0%) Query: 1 MSD-ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M++ + D KTE P+ RL +A E GQ ++ EL + +L + ARR++ Sbjct: 1 MAEQDQDQKTELPSEKRLSEAYERGQFAKTPELGIVFMLAAAFGALSMACEDGARRVAEY 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + H++ L+ + + AL PL+ V AL+S + G + K+ Sbjct: 61 ATGIFEQLHTVRISSGLVPAPVAMGAVTFAGALAPLMIASVGAALLSGGIQTGFRVTPKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L K KLNP+ G R+FS T LK ++ + Sbjct: 121 LGFKPEKLNPVTGFGRVFSKNTLVHGGIDFLKVSVIAFSLWLAARTLLGDPLFTAPVETA 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + ++L + + ++ F ++L M+RQ++++E +QS+GD V Sbjct: 181 YLGEFIHRSLMALLARLLLAMGIIAAISYAYEWFKTHRELMMTRQEVKEERRQSDGDALV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +R+M R RR+M+A VP ADV+V NPTHY+VAL+Y+ AP V+AKG +ALR Sbjct: 241 KSALRRMARRLMRRQMLAAVPTADVVVTNPTHYAVALKYERGIDKAPVVLAKGDRRLALR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 I+ I AE+ VPT+E +AR L+ E+G+ IPG+LY AVA +LA V++ R+ Sbjct: 301 IKAIAAEHEVPTVEDRAVARLLFATGEVGKPIPGELYQAVAGILAMVYRTHRY 353 >UniRef50_B1K591 Type III secretion exporter n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K591_BURCC Length = 357 Score = 310 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 96/345 (27%), Positives = 170/345 (49%), Gaps = 5/345 (1%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 SD+KTE PT +L++AR++G + +S +L + +++LV +++ F L L +S + Sbjct: 2 SDEKTEQPTRRKLKEARKKGTVAKSVDLVAAVLVLVSLALFTFAWHPLLDALHQNISRAI 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F S + + ++ + +A + L A +S GL S + PK Sbjct: 62 DFCGSE-RSMHTLWSVLMHELANGAIACCAISVAAALAAALSIGAQVGLQVSFDPVMPKM 120 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 +L+P G+K++FS + +LLK +K +++ + + +P + MAE Sbjct: 121 DRLSPAAGLKQIFSKRALIDLLKMSVKAVVIAAALWHVIVSLFPLITSAMAEPLAALSQI 180 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 + + + + D Q + ++ RMS+ +++ E K+ EG+P +K R Sbjct: 181 LWHALLKLLFAAAVLFLVVGVVDWKIQHWLMMRAQRMSKDEVKRELKEREGEPKLKHERR 240 Query: 245 QMQRAAARR---RMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 + + + V +A+V+V NPTHY+VAL+Y + P V+AKG A IR Sbjct: 241 KRAKELVNGGGESLSGAVGRANVVVVNPTHYAVALRYVRGETPLPVVLAKGIDDAAREIR 300 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 + + VP + PP+ARALY AE + IP +L+ VA +L WV Sbjct: 301 ALATQRGVPIVANPPVARALYEVAE-HRPIPSELFEVVAAILRWV 344 >UniRef50_D0ZDM3 Type III secretion apparatus protein n=5 Tax=Edwardsiella RepID=D0ZDM3_EDWTE Length = 352 Score = 310 bits (796), Expect = 5e-83, Method: Composition-based stats. Identities = 95/338 (28%), Positives = 163/338 (48%), Gaps = 2/338 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT RL AREEGQ+ +S+++++ + L V + + G +L + G + A L Sbjct: 3 EKTEQPTAKRLRDAREEGQVAKSQDISATVQLAVILLWMVTEGPTLYAAIGGFIDATLAT 62 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + + P+ I + + L + + + +++ ++ G +F+ K++ P + Sbjct: 63 LN--LPLPDAIALLTGKAAALVVRFVFSLAALLAVTLILTGLVETGFLFAPKAIMPSAER 120 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 +NPL K+M S EL K +LK +++G +F+ + +L+ + Sbjct: 121 INPLNNAKQMVSLLKLFELGKMVLKIVILGLTFTYFIRGYAASFAQLVRADAEAGLWVTS 180 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 + +++L D Q K+L MS +DI+ EFK +EG P +K R R++ Sbjct: 181 KMTLWMWGILLLLTALFAVVDYSMQYRHLRKQLMMSHEDIKQEFKNAEGSPEIKQRRREL 240 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 R + V A V+V NPTH +V L+Y E + P+VV G G A I + Sbjct: 241 HREIQSGSLADSVSSASVVVRNPTHIAVCLRYCEGETPLPQVVEYGRGARARHIVALAEA 300 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLA 344 +P +E PLARAL G +P L+ AVA++L Sbjct: 301 RRIPVVENIPLARALIATTRPGDYVPEALFVAVAQLLR 338 >UniRef50_Q1NCU7 YscU; putative type III secretion protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCU7_9SPHN Length = 375 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 108/376 (28%), Positives = 187/376 (49%), Gaps = 19/376 (5%) Query: 1 MS--DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+ ++ DKTE PTP RL AR +G I +S+++ L +++ ++ F +++G Sbjct: 1 MAQKNDGGDKTEKPTPKRLRDARRKGDIAKSKDVGPALGMIMWFLLLLFAAGHAGAQITG 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 ++ L S+ D + L+ ++LL ++ L+ +I+ + G + + + Sbjct: 61 LMRDTLGTATSMPFDAAAPVLGWAALLVLVSVSLL-ILGPAALIGVIAEFVQVGALVTTE 119 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L+P KLNP+ G+KRMFS ELLK + K L+ ++ G LW + L+ + Sbjct: 120 KLKPSLDKLNPIEGLKRMFSMDNLVELLKTVAKATLILTIAGVILWRSADGFVSLVQAAG 179 Query: 179 ITAMGNAMDLVGLCALLVV------------LGVIPMVGFDVFFQIFSHLKKLRMSRQDI 226 + + + D V L ++ + + D + S +KKLRMSR+DI Sbjct: 180 WSPVDHHGDQVASAMLALIRSVSIQLFAWTCAIFLLVAAADRAWAQHSFIKKLRMSRRDI 239 Query: 227 RDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAP 286 + E K +EGDP ++ + RQ+ A + +A +A+V++ NPTH ++AL YD P Sbjct: 240 KQEHKDNEGDPMLRAQRRQLHEEWANQNAVAAAGRANVLLTNPTHLAIALDYDPEDCPVP 299 Query: 287 KVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 V AKG G +A +R VP + LAR ++ +E+G IP + A+AE++ W Sbjct: 300 MVAAKGEGPLAAAMRAEAEREGVPIVRNIGLARGVWGESEVGGPIPRDRFDAIAEIILWA 359 Query: 347 WQLKRWRLAGGQRPVQ 362 R G + PV+ Sbjct: 360 ----RRARDGLEAPVR 371 >UniRef50_A4WVT4 Type III secretion exporter n=4 Tax=Rhodobacteraceae RepID=A4WVT4_RHOS5 Length = 359 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 117/356 (32%), Positives = 185/356 (51%), Gaps = 1/356 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ +DK P+ +LE+AR +G++P+S++L + + G +R+ M Sbjct: 1 MSEGDEDKPHEPSQRKLEEARRKGELPKSQDLVTAASYGGLLLAALGLGQGAIQRMGDMG 60 Query: 61 SAGL-HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 ++ L D + Q+ L+ +L +LP + L A+ + V LV + Sbjct: 61 TSLLGQADRFSTLLSDKAQPQVGGLLVSVLLTVLPFFAIPALAAVAALVAQRALVVAPTK 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L PK +++P+ G + F E K+++K +LV V F+ H M+ ++A +P Sbjct: 121 LAPKTERISPVSGFRNRFGRNGLFEFAKSLVKLLLVAVVFALFITFHMAGMLDMLAMAPG 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+G L+ +VVL + D F+Q HL++ RMSR+++ DE K +EGDPHV Sbjct: 181 LAVGRMFMLMLEFLAIVVLLSGGIGLIDYFWQRAEHLRRHRMSRKELTDEAKDAEGDPHV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K + RQ A RM+ DV ADV+V NPTHY+VAL++ AP VAKG +A R Sbjct: 241 KAQRRQKAMEIATNRMLQDVVGADVVVVNPTHYAVALRWKRGDRRAPLCVAKGTDEIAAR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 IRE AE VP PP ARAL+ +G++I + Y AVA + + +++R Sbjct: 301 IRERAAEAGVPIHRDPPTARALHAAVRVGEEIRPEHYKAVAAAIRFSERIRRRMKG 356 >UniRef50_Q2SEX3 Flagellar biosynthesis pathway, component FlhB n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEX3_HAHCH Length = 342 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 99/333 (29%), Positives = 179/333 (53%), Gaps = 1/333 (0%) Query: 27 PRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIR 86 +S+E++ + L G ++W LA R + S+ D I ++ Sbjct: 2 AKSQEVSHVFALAAGALLLWSVSQDLATRFFSLCQKLFADAASVDFDIITAKAWGIWIVS 61 Query: 87 EAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELL 146 E L PL+ ++++ ++ ++ G VFS ++P ++NP+ G KR+FS + EL+ Sbjct: 62 EVSWILSPLLVVMMVIGVLCSIVQTGPVFSFHPIKPDIKRINPITGFKRLFSIKILFELV 121 Query: 147 KAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGF 206 K ++K L+GSV + L P + L A+S TA+ + + ++ + Sbjct: 122 KNLIKLALLGSVLYWALAGLMPDLFGLTAKSAATALPVFIGYAAGIIFKLTAALLLIALI 181 Query: 207 DVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRR-MMADVPKADVI 265 D+ F + ++ +RM++++++DE K+ EGDPH++ + ++++R +R A VP+AD+I Sbjct: 182 DMLFTRWEFMRNMRMTKKEVKDEIKRREGDPHIRAKRKELERELRKRSGSAASVPEADLI 241 Query: 266 VNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHA 325 + NP HY+V ++YD KM+AP V KG +A +R++ ++ VP ++ PPLAR L++ Sbjct: 242 ITNPEHYAVVVKYDAKKMAAPTVTGKGGDAMAKHLRDLARQHQVPIIQDPPLARYLFKKT 301 Query: 326 EIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 EIG IP + VA L +Q+KR R Q Sbjct: 302 EIGSMIPEDAFVGVARALRRAYQIKRERQGRDQ 334 >UniRef50_Q0C5I7 FlhB/HrpN/YscU/SpaS family protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C5I7_HYPNA Length = 357 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 103/357 (28%), Positives = 172/357 (48%), Gaps = 10/357 (2%) Query: 1 MSD---ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFG----GVSLA 53 M++ +S +K + RL AR++G +P+S+E + ++L + G L Sbjct: 1 MAEQDQDSGEKEFDASEQRLRDARKDGDVPQSKEANAFALILGILIAALILDAVVGPKLF 60 Query: 54 RRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGL 113 S +L G F I G I +LAL PL+ + + L++ ++ + Sbjct: 61 DDFSRILYHGDAFAADIFEGDG---GATWAWIATTLLALSPLLLVMAALVLVALIIQQSI 117 Query: 114 VFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL 173 FS K + P K+NP+ IK + + + LK +K + + FL Sbjct: 118 AFSAKKIMPDMKKINPVDNIKNKYGTKGLTDFLKDTVKMLFAAGLGTLFLIQFTRDYYGS 177 Query: 174 MAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQS 233 + + L + D+ Q H KLRM+R+D++ E KQS Sbjct: 178 SSVDTADFYQFTFNQTLRLILYFFAFQFVLAALDLPLQWRIHSHKLRMTREDMKKEMKQS 237 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EGDPH++ + R+ +R +M+ +V A V++ NPTHY+VAL++D + AP VAKG Sbjct: 238 EGDPHMRQQRREKATKISRGQMLQNVKSATVVMVNPTHYAVALKWDPDSKLAPVCVAKGT 297 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +A++IRE+ ENNVP PP R++Y E+ Q+I + +AAVA + +V +L+ Sbjct: 298 DHLAMKIRELAIENNVPIYSDPPATRSIYSMVEVDQEIQAEHFAAVAAAIQFVDRLR 354 >UniRef50_Q44760 Flagellar biosynthetic protein flhB n=23 Tax=Borrelia RepID=FLHB_BORBU Length = 372 Score = 307 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 95/354 (26%), Positives = 187/354 (52%), Gaps = 5/354 (1%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S + + +TE PT + +KAREEG++ +S E+ + + LL+ ++ +F A L + Sbjct: 19 SADDEGRTELPTDQKKQKAREEGRVLKSTEINTAVSLLLLFALFFFMLSYFALDLIAVFK 78 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 ++ +G IR M ++ + V ++ G + KSL+ Sbjct: 79 EQAIKLPEVMRMSVYTMG--FAYIRSIMGYVVLFFFASLAVNFFVNIIQVGFFITFKSLE 136 Query: 122 PKFSKL--NPLPGIKR-MFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 P++ K+ N K FSA L K++LK +++ + F + ++ ++ +L + Sbjct: 137 PRWDKISFNFSRWAKNSFFSAGAFFNLFKSLLKVVIICLIYYFIIENNIGKISKLSEYTL 196 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + + + + V+ + + FD FQ +++ L+M++++++ E K+ EGDP Sbjct: 197 QSGISIVLVIAYKICFFSVMFLAIVGVFDYLFQRSQYIESLKMTKEEVKQERKEMEGDPL 256 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 ++ RI++ R + +P+ADV++ NP H++VA+++D M APKV+AKG +AL Sbjct: 257 LRSRIKERMRVILSTNLRVAIPQADVVITNPEHFAVAIKWDSETMLAPKVLAKGQDEIAL 316 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 I++I ENNVP +E LARALY + ++ ++IP + + V+++L V+ + + Sbjct: 317 TIKKIARENNVPLMENKLLARALYANVKVNEEIPREYWEIVSKILVRVYSITKK 370 >UniRef50_A6CGV2 Flagellar biosynthetic protein FlhB (Fragment) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CGV2_9PLAN Length = 323 Score = 307 bits (786), Expect = 7e-82, Method: Composition-based stats. Identities = 100/313 (31%), Positives = 174/313 (55%) Query: 37 ILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLI 96 ++L +V++F V L+ + ++ L + D L++ + +I + L ++ Sbjct: 2 MMLATAAVLYFFAVRLSSDMKNLMEVSLTTPVWLRVDQPLLIERCESIIELFLEGTLVMM 61 Query: 97 SGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVG 156 + + A+ ++ G + + LQ K+ +LNP+ G KR+ S + +L ++ K L+ Sbjct: 62 VVLFVSAVFLNIVQVGFMMTPDVLQLKWERLNPIEGAKRIISIRGLVKLGVSLGKISLLV 121 Query: 157 SVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHL 216 + +F + +P + LM P T + + + LL+ L +I + G D FQ + H Sbjct: 122 LIAVWFSYLVFPGFLGLMGAPPETILRDIFNSTIELGLLLALALIILGGLDYAFQKWKHE 181 Query: 217 KKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVAL 276 K L MS+Q+IR+E K +GDP ++ R R+ R A + ++ V ADV++ NPTH S+A+ Sbjct: 182 KDLMMSKQEIREEMKSMDGDPLIRQRRREAHRKLAMSQELSKVESADVVITNPTHISIAI 241 Query: 277 QYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLY 336 +YD M AP VVAKGAG +A +IR+I E+ +P +E LAR +YR + GQ+IP +LY Sbjct: 242 KYDPESMPAPVVVAKGAGEIAFQIRKIANEHGIPIIERKALARQMYRDVKTGQEIPFELY 301 Query: 337 AAVAEVLAWVWQL 349 E++A+V+ L Sbjct: 302 EVFVEIMAYVYSL 314 >UniRef50_B5Y7F6 Flagellar biosynthetic protein FlhB n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7F6_COPPD Length = 343 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 119/352 (33%), Positives = 180/352 (51%), Gaps = 13/352 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M + ++TE P+P RLE+A +EG +P+S ELT + L V V ++ M Sbjct: 1 MPE--GERTEPPSPRRLERAIQEGNVPQSPELTGAIGLFVFVLILRVYYPRFVSSWQRMW 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + P + +++ + LL + VVL L+ L G+ K + Sbjct: 59 FGVFY-----SVSPETAAHDLAVVLLSTLPVLLVPLLAVVLATLV----LSGVRLYPKKM 109 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK LNP IKR+FS Q+ ++ +LK IL+ V F +M + PI Sbjct: 110 VPKLDGLNPAQNIKRIFSLQSLEQMGIGLLKVILLSVVAYFLAKDRLVGIMS-GTQDPIQ 168 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 M + ++ L +V + + D FQ L+M+++++++E K EGDP VK Sbjct: 169 FMSLSASILTDILLYLVAVYLLIGLADYAFQRRRWWNSLKMTKEEVKEEMKSIEGDPTVK 228 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R+R R A RR +ADV KA V++ NPT Y+VAL+Y++ M AP++VAKGAG +A RI Sbjct: 229 ARLRSRMRQYAMRRSLADVKKATVVITNPTEYAVALRYEKG-MVAPELVAKGAGWLAQRI 287 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 ++ NVP + P LAR ++R E+G I LY AVA VL V + KR Sbjct: 288 KDEARRYNVPVVVRPELARTIFRKVEVGDYITPDLYQAVAAVLVEVMKKKRQ 339 >UniRef50_Q1D0P0 Type III secretion protein, FlhB/HrpN/YscU/SpaS family n=2 Tax=Cystobacterineae RepID=Q1D0P0_MYXXD Length = 349 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 100/340 (29%), Positives = 159/340 (46%), Gaps = 9/340 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE P+ RL +AR +GQIPRSR L + + G+ + RL Sbjct: 2 SGEKTEKPSAKRLREARRKGQIPRSRLLNASAVTAGGLFGLTAAAPVGMARLQAWTEHLF 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 LG + A P++ G AL+ V GL + ++PK Sbjct: 62 LGQQD--------LGAWQEGLWIAARFCGPVLGGAFAAALLVSVATVGLEADLQHVEPKL 113 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 +++ + G++R+FS + EL K +L LVG++ + P M+ + Sbjct: 114 ERISLVAGMQRLFSWRPWVELAKTLLIVCLVGALVWSDVEEAAPDAMKTAWLGGAEGLSL 173 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 A+ V A + ++ + D H+K L M+R++++ E+K SEGDP KG+ + Sbjct: 174 AVAHVSGLASRLACLLVVLGVGDYALAWRRHIKDLMMTREEMKREYKDSEGDPRHKGQRK 233 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + R A+ V KA +V NPTH +VAL+YD ++ AP +VAK A +RE Sbjct: 234 ALHRQLAQGGAARGVQKATAVVVNPTHIAVALRYDVDECEAPYLVAKAREGDARAMREQA 293 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLA 344 + + PLAR+L ++G+ IP +LY A A VL Sbjct: 294 RRLGIAVVRDIPLARSLIH-YDVGEPIPEELYQAAAVVLR 332 >UniRef50_Q6MD75 Putative type III secretion pathway protein sctU n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD75_PARUW Length = 357 Score = 303 bits (776), Expect = 8e-81, Method: Composition-based stats. Identities = 96/346 (27%), Positives = 177/346 (51%), Gaps = 2/346 (0%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLH 65 DKTE TP +L+ A+++GQI +S++L + + V++I SL +L+ L Sbjct: 2 GDKTEKATPKKLKDAKKKGQIAKSQDLPTAFTFIASVAIILALASSLYHQLANFLVGTFR 61 Query: 66 FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFS 125 + +I+ LA +P ++ V LV + + G VF+ + + Sbjct: 62 -SVNTPELSGVIVNLFYKANEVIFLASIPTMALVALVGVTITFLTVGPVFAPEVFKFDIK 120 Query: 126 KLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNA 185 K NP+ +K F +T ELLK+++K + + +++ P +++ ++ A+ Sbjct: 121 KFNPVDNLKAKFKLKTLVELLKSVIKISIASYLIYKVMYNSIPVLIQTVSMPISGALIVF 180 Query: 186 MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQ 245 + L V L I + D +Q + K++ M + +++ E+K SEGDPH+KG+ RQ Sbjct: 181 HAFLVEVVLKVGLFFIVVAVADFIYQKKTFAKEMMMEKFEVKQEYKNSEGDPHIKGKRRQ 240 Query: 246 MQRAAA-RRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + + A + V +A +V NPTH ++A+ Y+ + +AP ++A G ++A RI +I Sbjct: 241 IAQEIAYQEGPTGGVKRAQAVVTNPTHLAIAIGYERHMDAAPYILAMGKDVLAERIVKIA 300 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +N++P L LA L+ EI + +P Y A+AE++ W+ LK Sbjct: 301 EKNDIPVLRNITLAHILWEQGEIYEYVPEDTYEALAEIMRWIASLK 346 >UniRef50_A3P7C2 Type III secretion protein, YscU/HrpY family n=37 Tax=Burkholderia RepID=A3P7C2_BURP0 Length = 420 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 96/334 (28%), Positives = 169/334 (50%), Gaps = 3/334 (0%) Query: 17 LEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNL 76 L+K RE+GQ+ +S+++ + L + V+ L LS + L F P Sbjct: 74 LKKVREKGQVAKSKDIADAMTLAAAIGVLTACESMLTGGLSRAVRTALDFVRGE-RTPQA 132 Query: 77 ILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRM 136 L + L A+L +LP ++ ++ ++S G + + + + PKF +NP+ GIKR+ Sbjct: 133 TLAALHDLAASAVLTMLPFVAAAIVAGIVSQAPQAGFLITLEPVMPKFDAINPMAGIKRI 192 Query: 137 FSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLV 196 FS ++ EL+K I+K +++ V + +P ++ + E+ ++ V Sbjct: 193 FSLKSLLELVKMIVKALVLACVAWKMMTSLFPLVVASVYEATPQLARVLWTVLMKLLGTV 252 Query: 197 VLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAA-RRRM 255 + V + D +++ RM++++++ E K+S+GDPH KG R++ R A Sbjct: 253 SVVVAVLAAADYKIARVMFVRENRMTKEEVKREHKESDGDPHTKGERRRLAREIATSAPP 312 Query: 256 MADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAP 315 V +A+V+V NPTHY+VA++Y ++ P+V+ K AL +R VP + P Sbjct: 313 RQRVGQANVLVVNPTHYAVAIRYAPDEHPLPRVIEKAVDDGALALRRHAHALGVPIVGNP 372 Query: 316 PLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 +ARALYR E IP +L+ VA +L WV L Sbjct: 373 SVARALYR-VERDASIPEELFETVAAILRWVESL 405 >UniRef50_C6CGR8 Type III secretion protein, YscU/HrpY family n=22 Tax=Gammaproteobacteria RepID=C6CGR8_DICZE Length = 361 Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats. Identities = 100/351 (28%), Positives = 176/351 (50%), Gaps = 11/351 (3%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PTP +L+ AR++G++ +S+++ LLI + +I S +L ++ L Sbjct: 3 EKTEKPTPKKLQDARKKGEVGQSQDVPKLLISFALLEMILALTDSGMSKLQALMQLPL-- 60 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLIS--GVVLVALISPVMLGGLVFSGKSLQPKF 124 S I+DP + A+LA L++ +L+ ++ + G +F+ ++L+ F Sbjct: 61 --SRISDPFGHAADEVFSEALALLATFCLLTISVALLMRIVGGWIQYGPLFAVEALKLDF 118 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 ++LNP+ IK+MF+ + ++L +LK +G V + ++ L Sbjct: 119 NRLNPINQIKQMFTMRKLTDMLTNLLKATTIGLVFWLVVTPQLEWLVELAYGDLTAFWKG 178 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +++ + + ++ + FD Q + LK+ RMS +DIR+E+K SEGDPH+KG + Sbjct: 179 VENVLKSVSRTTLSALLALGVFDFGLQKYYFLKQQRMSHEDIRNEYKNSEGDPHMKGHRK 238 Query: 245 QMQRAA----ARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 + + A R+ V AD+++ NPTHY+VAL Y K P+++ KG A + Sbjct: 239 SVAQEILNEPASPRVKPKVEDADLLLVNPTHYAVALFYRPGKTPLPRILLKGEDDHARAL 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 + VP + LAR LYR G IP VA+V + QL++ Sbjct: 299 IARAHQAGVPVIRFIWLARTLYR-VPEGHYIPRDTLQPVAQVYKVLRQLEK 348 >UniRef50_Q16DQ8 Flagellar biosynthetic protein FlhB n=15 Tax=Rhodobacterales RepID=Q16DQ8_ROSDO Length = 362 Score = 300 bits (768), Expect = 8e-80, Method: Composition-based stats. Identities = 112/359 (31%), Positives = 178/359 (49%), Gaps = 4/359 (1%) Query: 1 MS--DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS DE DK+ TP +L +AR++G+I RS EL + + + G S L Sbjct: 1 MSAPDEEADKSFEATPQKLLEARKKGEIARSTELLTAASYAGFLLALLLFGESGLLELGS 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIIL--LIREAMLALLPLISGVVLVALISPVMLGGLVFS 116 ++ + I G + +I+ ALLP+ L ++ G+VF+ Sbjct: 61 TMAVIIGQSAQIAPLFFEGAGTVPARGIIQSTGSALLPIFVYPALAVMLVLFATRGIVFA 120 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 +QPK SK++ + K F + + + K I+ ++ FL+H +M+ + Sbjct: 121 PTKVQPKLSKISVISNAKNKFGRTGLFQFVLSFSKLIIYSAILAVFLYHRTNEMVAALQT 180 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 +P + + + VV+ + G D +Q F HL+K +MSR+++ DE K SEGD Sbjct: 181 TPQYTVILLAKICIEFLIYVVIVSAIIGGIDAIWQHFEHLRKNKMSRKEVMDETKNSEGD 240 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P++K RQ ++ A ++ +V ADV++ NPTH++VAL++D AP VAKG Sbjct: 241 PYMKQERRQRAQSLAGTQVAVEVAAADVVIVNPTHFAVALKWDRTPGQAPVCVAKGVDET 300 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 ALRIREI EN VP PP ARAL+ IG QI + Y AVA + + +++ Sbjct: 301 ALRIREIATENAVPIHSDPPAARALHATTNIGDQIAPEHYKAVAAAIRFAENMRKQSKG 359 >UniRef50_C0QXX4 Flagellar biosynthesis protein FlhB n=2 Tax=Brachyspira RepID=C0QXX4_BRAHW Length = 400 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 105/360 (29%), Positives = 191/360 (53%), Gaps = 7/360 (1%) Query: 4 ESDDKTEAPTPHRLEKAREE-GQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 E + +TE PT + KAREE G++ S E+ L+L V ++VI ++ Sbjct: 41 EDEGRTELPTERKKRKAREEEGRVVNSAEINQTLVLAVSIAVIALLTTYFTHTVAQFFIT 100 Query: 63 GLH--FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L+ + + ++ + +++ ++V + + +F+ K L Sbjct: 101 VLNKISNADASINNTAYTDMLLEIFVLLAKTAGIIMAVALVVGVGVNLAQTQFLFTTKKL 160 Query: 121 QPKFSKLNPL-PGIK-RMF-SAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 +P F ++ P K R+F S+Q L K + K I++ +T ++ ++ ++ Sbjct: 161 KPNFKRIAPTWSNFKERVFISSQNLMNLAKILFKMIVISLLTFTTIYGKRTELFNMINMG 220 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 AM +V V++ +I + FD FFQ ++ L+M++ ++++EFK+ EGDP Sbjct: 221 LSQAMNLFFFIVLEMLAKVIIFMIIVSAFDYFFQKRQYINSLKMTKHEMKEEFKEMEGDP 280 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 VK ++++M R R M+ VP+ADV++ NPTH++VAL+Y+ AP V AKGA +A Sbjct: 281 LVKSQLQEMARKIVSRTMLKSVPEADVVITNPTHFAVALKYENG-DYAPIVTAKGADHIA 339 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 L+I+EI +N+V +E PLAR LY + E+GQ IP +L+ V+ +L V++++ ++A Sbjct: 340 LKIKEIARQNDVQIVENKPLARELYYNVELGQYIPEKLFHVVSRILGEVYRIRNEKMARA 399 >UniRef50_C8BNV0 HrcU n=6 Tax=Gammaproteobacteria RepID=C8BNV0_PSESY Length = 362 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 92/348 (26%), Positives = 164/348 (47%), Gaps = 8/348 (2%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLH- 65 +K + TP ++ AR+ GQ+ +S++L LLIL+V + +L ++ + Sbjct: 3 EKNQDATPKQIRDARKRGQVAQSQDLPKLLILVVVSEITLGMADVSMEKLQSLIKLSMTR 62 Query: 66 FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFS 125 D + ++ Q + L+ + + +L+ L+ M G++F+ ++L+P Sbjct: 63 MDQPFLRTVGEVVTQGVWLVAAFAVLS---VGVAMLMRLLGSWMQFGVLFAPEALKPSME 119 Query: 126 KLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNA 185 KLNP +K+MF+ ++ L I+K ++ V + ++ L+ +T Sbjct: 120 KLNPFSHLKQMFTLRSLTTSLSGIIKAAIIAVVMWMIVEPALGTLVSLVHSDLVTFWHAL 179 Query: 186 MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQ 245 L + ++ + D Q + H K+LRMS +DI+ E+K SEG+P +KG RQ Sbjct: 180 SKLFHQILRVTCGILLVLAVADFAIQKYFHAKQLRMSMEDIKQEYKNSEGNPEIKGHRRQ 239 Query: 246 MQRAAARRRMMA---DVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 + + A V ADV++ NPTHY+VAL Y + + P++ K AL + E Sbjct: 240 LAHELLNQAPKAPPKPVKDADVLIVNPTHYAVALYYRPGETALPRIHCKNIDAGALALIE 299 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +P ++ LAR LYR + IP AVA++ + QL Sbjct: 300 EAKRERIPVVQCIWLARTLYR-VPQDRFIPRDTLQAVAQIYGVIKQLD 346 >UniRef50_Q93PY9 RscU n=4 Tax=Pseudomonas RepID=Q93PY9_PSEFL Length = 365 Score = 297 bits (760), Expect = 7e-79, Method: Composition-based stats. Identities = 94/354 (26%), Positives = 170/354 (48%), Gaps = 9/354 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD S +K + +L R++GQ+ +S+++ LL L + F + +R ++ Sbjct: 1 MSD-SGEKKHPASAKKLRDQRKKGQVAQSQDVAKLLALTAISEIALFTAETSLQRFQQLM 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVA-LISPVMLGGLVFSGKS 119 L + L +++ + ++ GV + LIS M GL+F+ ++ Sbjct: 60 LLPLSR---LTQPFTRALEEVLFEGMTVFFSFALVMVGVAITTKLISSWMQFGLLFAPET 116 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+ F++LNP+ +K+MFSAQ LL +I K L+ S+ +W ++ L Sbjct: 117 LKLDFNRLNPISQVKQMFSAQQLMNLLMSIAKACLIASILYVVIWPSLDTLINLATSDLQ 176 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + + + L + + ++ + D+ K++RM++ ++ E+K EGDPHV Sbjct: 177 SYILALIALFRHLLHVCLGMLLVLALIDLIMVRHFFAKRMRMTQVEVVKEYKDMEGDPHV 236 Query: 240 KGRIRQMQRAAARRRMMADVPK---ADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 KG+ R + A+ +PK +D++V NPTH++VAL Y K P +V+KG Sbjct: 237 KGQRRSLAYQLAQEEPKVKLPKLEESDMLVVNPTHFAVALYYRPGKTPLPMLVSKGTDDE 296 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 A + +VP ++ LAR LY ++G IP + AVA + + +L Sbjct: 297 ARTLIRRAKAADVPVIQCVWLARTLYTK-KLGASIPRETLRAVALIYRTLRELD 349 >UniRef50_D2LD13 Type III secretion exporter n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD13_RHOVA Length = 353 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 117/354 (33%), Positives = 180/354 (50%), Gaps = 10/354 (2%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVS----LAR 54 M+D E+D+KTEAP+ RL + ++ P SRE+ S L V + + + + Sbjct: 1 MADNSETDNKTEAPSEKRLRDSLDKDGGPSSREVNSAAALFALVLFLMTMAPADFGEVVK 60 Query: 55 RLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLV 114 LS + F D IL L I LPL+ ++ L++ Sbjct: 61 NLSVFIEDPSGFSLENGADAFFILQLAGLTIFNFA---LPLVLMLLAATLLASFAQNPPT 117 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 + P ++++P G+KR+F+ +LLK+ +K +V ++ L Sbjct: 118 LIFNKIAPDLARISPQAGLKRLFAFDAVVDLLKSFIKFGIVAIAFYVAFQGGAAALLVLQ 177 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 +S T + L L+ L + DVF+ F L+KL+MSRQD++DE KQSE Sbjct: 178 TDSAST-IELIKRLAFKAILICALACAVLAVADVFWTRFRWLRKLKMSRQDLKDEHKQSE 236 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDP ++ R R + RA RR MM VP A V++ NPTHY+VAL+Y + AP+ +AKG Sbjct: 237 GDPMLRARARAIARARVRRNMMTSVPNATVVIANPTHYAVALRYVRGQDRAPQTLAKGKN 296 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 +ALRIR I +NNVP +E LA++L+ + Q IP + Y AVAEV+ ++ + Sbjct: 297 KLALRIRSIAEDNNVPVVENKALAKSLHDAVRVDQPIPHEFYKAVAEVIIYINK 350 >UniRef50_A3VS81 Flagellar biosynthetic protein FlhB n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VS81_9PROT Length = 355 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 93/359 (25%), Positives = 176/359 (49%), Gaps = 11/359 (3%) Query: 1 MSDESDD--KTEAPTPHRLEKAREEGQIPRSRELTSLL----ILLVGVSVIWFGGVSLAR 54 M++ D+ K+ TP R+++AR++G + +S E+ IL+ + + +++A Sbjct: 1 MAENQDEAEKSHEATPERIKQARQKGDVAQSPEVLVFARYLGILVALLGFVSALAMNMAT 60 Query: 55 RLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLV 114 L+ ++ +++D + + G + L L++ + + + + LV Sbjct: 61 SLNVFMARPFEASARLMSDADPLEG-----FGSSALFFFALMAAPIALVIAGLIAQQALV 115 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 F+ ++P +KLNP+ K+ F + ++ +K +V V ++ + Sbjct: 116 FAPNKIKPDLNKLNPVKNAKQKFGKAALTDFVRNTVKITIVMVVGMVIGLAQTGRLTASV 175 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 P L + + V+ G D+ + + ++L+MSRQ+++DE K +E Sbjct: 176 GAPPGLLAEELAGLARIMVITGVILAAIAAGIDLPIKWSQYRERLKMSRQELKDETKSTE 235 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDP + ++ R A+ R + DVP ADV+V NP HY+VALQ++ ++ P+ +AKG Sbjct: 236 GDPAQRSERQKRAREIAQNRQLLDVPDADVVVVNPEHYAVALQWNRHRGEVPRCIAKGVD 295 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +ALRIR I E VP AR+LY E+G++I + Y AVA + + +L+ R Sbjct: 296 AIALRIRNIADEAGVPLYRDVQTARSLYAVVEVGEEIRYEHYEAVAAAIRFADKLRAKR 354 >UniRef50_C9NP54 Type III secretion protein HrpY n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NP54_9VIBR Length = 352 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 96/338 (28%), Positives = 163/338 (48%), Gaps = 8/338 (2%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLH- 65 +KTE PT +++ +R+ GQ+ ++ ++ LL ++ V+ L L ++ + Sbjct: 3 EKTEKPTQKKIQDSRKRGQVAQTPDIPKLLACVLTFEVLVACSEWLMAELKTLVYMPITL 62 Query: 66 FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFS 125 F+ + +L ++ +L ++P+ ALI G +F+ ++L+ F+ Sbjct: 63 FNQPFEHGFLSVLEVAKHVLFLFILIVIPV---SFFAALIGRWGQFGFLFAPEALKLDFN 119 Query: 126 KLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNA 185 KLNP +K++FS Q E+L I K+IL+ V L + +L A Sbjct: 120 KLNPFSQLKQLFSGQKLTEVLNNIFKSILIFVVFYILLNDLAHAVFKLPNLPLDRMWLAA 179 Query: 186 MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQ 245 +DL A + +L ++ D + F HLK+L+M +Q+++ EFK SEGDP VK + RQ Sbjct: 180 IDLFIYVARVCLLLLLAPAILDFALKKFFHLKQLKMDKQEVKQEFKDSEGDPFVKSQRRQ 239 Query: 246 MQRAAARRR---MMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 + A + + D++V NPTH++V L Y+ P V AKG AL + + Sbjct: 240 LGMELVEGSPQTTNASMDEMDMLVVNPTHFAVGLHYNPGVTPLPVVGAKGKDREALELIQ 299 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVA 340 + VP + LAR LY+ E+G I AVA Sbjct: 300 QADHSGVPVIRYVWLARTLYQQ-ELGSYINRDTLDAVA 336 >UniRef50_Q2NR69 Type III secretion apparatus n=5 Tax=Enterobacteriaceae RepID=Q2NR69_SODGM Length = 352 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 85/351 (24%), Positives = 161/351 (45%), Gaps = 11/351 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ KTE PTP RL A ++GQ +SR++ ++L GV W + L + Sbjct: 1 MSN----KTEKPTPKRLRDAAKKGQAFKSRDVIIACMMLCGVC--WLTSFTSLESLMDLY 54 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + + S+ L+ A+ LLP+I+ ++ + + ++ G + + ++ Sbjct: 55 RQMVVGNFSLSLTAYRNA-----LMFTALQILLPIIAMGIVASALPLLLQTGFMLATRAF 109 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + F LNP GIK++FS +T + +KA+L H + + +P Sbjct: 110 KLNFQALNPTRGIKKIFSLRTAKDCVKALLYLAAFAIALMIVWRTHRQLLFEQLFANPQD 169 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + L+ L +L ++ +V D+ + F HL+ L+M +Q++R E K+ EGDP +K Sbjct: 170 IVAIWRQLLMSLVLTCLLCIVCIVILDIVAEYFLHLRSLKMDKQEVRREMKEQEGDPEIK 229 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R R+ + AD+ + +I+ NPTH +V + ++ + P + AL + Sbjct: 230 HRRREAHMEILSEQTQADIKGSQLIIANPTHLAVGIYHNPDLTPLPFISVLERNQRALAV 289 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 R+ + V +E LAR +Y + + V +L+W+ ++ Sbjct: 290 RDYAKKVGVSVIEDVQLARRIYYTHHLYSFVKINELDQVLRLLSWLQDVEN 340 >UniRef50_A2WHV2 Flagellar biosynthesis pathway component FlhB n=3 Tax=Proteobacteria RepID=A2WHV2_9BURK Length = 392 Score = 283 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 79/351 (22%), Positives = 164/351 (46%), Gaps = 12/351 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIW-FGGVSLARRLSGM 59 MS + KTE TP + + E GQI ++R+ ++L GV V+ + + M Sbjct: 1 MS--AQSKTEEATPKKRRDSAERGQILKARDAVVACVMLCGVFVVSKMSLHEIGAVMIDM 58 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + G D S + L+ + + P++ +L A + +M V + K+ Sbjct: 59 MQNGFDVDTS---------SYVKSLLVACLKVVAPVLLVCILAAAVPSLMQSKFVLATKA 109 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+ F LNP+ G K++F+ +T + +K++L ++ + +++ Sbjct: 110 LKINFEALNPVRGFKKIFNLRTVKDFVKSLLYLVVFSVAVSIVWVRNKEKLLAQFYSDLH 169 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 +G DL+ L + + ++ DV ++ H K+LRM++++++ E K++EG P + Sbjct: 170 GVVGLWKDLMVDLVLTCLGCALVILILDVLVEMLIHRKELRMAKEEVKRERKENEGSPEI 229 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGR ++M + + D+ + +I+ NPTH +V + ++ + + P V AL Sbjct: 230 KGRRKEMHQELLSEQDKHDIQNSKMIIANPTHVAVGIYFNPSHLPYPLVSISERNQRALA 289 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +R + VP + PLAR +Y+ + + + + V ++ W+ ++ Sbjct: 290 VRRYAEKIGVPVIVDVPLARQIYKSHKRYEIVSLDVLEPVVRLMVWLRDVE 340 >UniRef50_D2TZ36 Type III secretion system protein SpaS n=1 Tax=Arsenophonus nasoniae RepID=D2TZ36_9ENTR Length = 345 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 76/347 (21%), Positives = 168/347 (48%), Gaps = 7/347 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PTP +L+ A ++G+ +S++L + L+ + ++ + + + L Sbjct: 2 SANKTEKPTPKKLKDAAQKGKSFKSKDLV--ISCLIFLGCLYLTNYINFTTIIEIWANTL 59 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 +HSI L +L A+ LP + +L+ +++ + G + K L+ F Sbjct: 60 KNNHSITP-----LNYTFVLFFTALKIFLPFLFLCILIIMLTTMAQTGFKIATKVLKFDF 114 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 + LNP+ G+K++FS +T + +K L I+ VT + ++ + + + + Sbjct: 115 NNLNPINGVKKIFSIRTIKDFIKTFLFIIIFFIVTYIYWNNNKKIIFSQIYLNIESVFIV 174 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +LV ++++L ++ D + F H+K L+M + +++ E+K+ EG+P +K + + Sbjct: 175 WKELVSNFIIILLLSSFIILILDAVAEYFIHIKDLKMDKNEVKREYKEQEGNPEIKSKRK 234 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 ++ ++ +D+ + ++ NPTH + + + ++ P V AL R Sbjct: 235 ELHVEILSEQVKSDIESSKFMIANPTHIIIGIYLNPQIVAIPMVSVLETNQRALAARAYA 294 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 + VP +E LAR +Y ++ I + V ++L+W+ +++ Sbjct: 295 EKEGVPVIENIVLARRIYNTHQLYSFINLEEIGEVIKILSWLQKVEN 341 >UniRef50_B8HEI9 Type III secretion exporter n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HEI9_ARTCA Length = 359 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 127/357 (35%), Positives = 186/357 (52%), Gaps = 6/357 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD S ++TE T R+ R +GQ+ RS++LT+ L + G ++ + + Sbjct: 1 MSD-SQERTEQATDKRMRDVRSKGQLSRSQDLTAWLGVGAGAVMLPATIDRASNAAVDQV 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + S DP + + L + L P+ V LV L + GG+ F K Sbjct: 60 FSVRAIMESP--DPAKAVHALELGLGSMAGVLAPMFVVVFLVVLAGSAVQGGVHF--KKF 115 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + +F N L G+KR+F Q LKA+LK ++VG V + P ++ Sbjct: 116 RAEFEHFNLLSGMKRLFGMQAVWGGLKALLKAVVVGIVLYSVVQGLIPVLLTAGGLPVSG 175 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + A D +G V + + DV + + KK RMS++++ DE K +EGDP V+ Sbjct: 176 VIAAAADGIGALVQCAVAAGLVLAAVDVLVVMRRNRKKTRMSKKEVTDENKNTEGDPLVR 235 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R Q A +R RM+A + ADV++ NPTH +VAL+YD K SAP+VVAKGAG++A RI Sbjct: 236 SHRRSRQLAMSRNRMIAAIADADVVLVNPTHVAVALKYDAGK-SAPRVVAKGAGVIAARI 294 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 R VP ++ PLARAL+ E+GQ+IP +LY AVA VLA+V LK A G Sbjct: 295 RAEAEAKEVPMVQDIPLARALHSACELGQEIPVELYRAVAGVLAFVMSLKSRGAARG 351 >UniRef50_B3RAC6 SctU: non flagellar T3S system conserved inner membrane protein. flhB/hrpN/yscU/spaS family n=1 Tax=Cupriavidus taiwanensis RepID=B3RAC6_CUPTR Length = 344 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 91/346 (26%), Positives = 170/346 (49%), Gaps = 7/346 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD +K T +L++AR+ G++PRS ++TS ++ L ++ +W G R + Sbjct: 1 MSDS--EKNLEATRRKLDEARKRGEVPRSSDVTSAVVFLGVLAGLWLLGRYFVRLFQSLW 58 Query: 61 SAGL-HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + + + + L+LG+ R ++ +LP++ ++ ++ + G + + + Sbjct: 59 HSAMGSVPQHLADQQMLVLGEA--AARFLLMGVLPIVGLALVCGIVGAFLQVGPLVAFEQ 116 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++P ++LNP G+KRMF+ + L K ++K +L+ + +R P Sbjct: 117 IKPDLARLNPAEGLKRMFAVRNLVNLAKILVKILLLAGLVYVLALGAIEDGVRTGYARPA 176 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + ++ + + M D + +K+ RMS + R E+K+++GDP + Sbjct: 177 EILLLVAYIILRMCCWAAVIYLVMAVVDYVHERHQFMKRQRMSVDEYRREYKETQGDPIM 236 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 GR R AA + V + +V T Y+VAL+YD + P+VVAKG+G VA R Sbjct: 237 AGRRRAAFFEAAFFGVSERVRVSTAVVY-STQYAVALRYD-GPGTLPRVVAKGSGQVAAR 294 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAW 345 IR+ A+ VP+ LA+ LY + + + I L+ VAE++ W Sbjct: 295 IRQAAADYLVPSAFDSDLAQRLYLNVPLDRFIDRTLFERVAELMRW 340 >UniRef50_Q2NVH8 Type III secretion apparatus SpaS n=7 Tax=Enterobacteriaceae RepID=Q2NVH8_SODGM Length = 370 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 77/380 (20%), Positives = 169/380 (44%), Gaps = 20/380 (5%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT R ++ ++GQ + +++T+ ++L+ G++ + +G + F Sbjct: 3 EKTEKPTEKRSRESAQKGQSFKVKDVTTTVVLIGGIAYLGYGMD---------FQPFIAF 53 Query: 67 DHSIINDPNLILGQ--IILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 ++++ + + Q +I L M LP+++ + S ++ +V + K+++ F Sbjct: 54 YNNVVLNGERLSYQAYLISLAMLFMQLTLPIVAVCFIAGTFSTLLQTRMVIATKAIKLNF 113 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 LNP+ G+KR+F+ + EL+K + + +F H+ +++ + + + Sbjct: 114 DALNPVKGLKRIFNLRAVKELVKTLCYVAVFVVGVNYFQSHYLKELLSIYHGNIWQVIRI 173 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +L + V + ++ D + F K ++M + +++ E K++EG+P +K R Sbjct: 174 WSELAVKLVFIYVGVSLIVLVLDGLCEYFLQFKDMKMEKHEVKQEHKENEGNPEIKSARR 233 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 A + +++I+ NPTH ++ + ++ + P + + + A I Sbjct: 234 NAHFELLSGAEQAAIRSSEMILANPTHIALGIFFNPDVAMLPFITLRATNMKARAIIAYA 293 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQI--PGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQ 362 + VP + + PLAR LY++ + I + +L W LK+ AG P Q Sbjct: 294 EKVGVPVVRSIPLARRLYKNYTVHSFISLNDNDLIEIMRILIW---LKQVESAGQPEPEQ 350 Query: 363 PTHLPVPEALDFINEKPTHE 382 VP + E Sbjct: 351 N----VPPEPSSEEKSSPKE 366 >UniRef50_C4UMD4 Putative uncharacterized protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UMD4_YERRU Length = 386 Score = 277 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 83/372 (22%), Positives = 171/372 (45%), Gaps = 17/372 (4%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT ++ + ++GQ + ++L + +L+ G I G S L +L L Sbjct: 3 EKTEQPTDKKVRDSAKKGQSFKGKDLIAAAVLVCGALAI--SGFSSLTALGHLLQKVLLS 60 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 I I + L R + A++P++ +L ++ ++ + ++L+ FS Sbjct: 61 PSEI-----KISAYLDELYRLFLYAVIPVLLCCLLPGMLLSLLQSRFRLATEALKINFSH 115 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LNP+ G K++F + EL+KA+L + G+ F+ ++ L + Sbjct: 116 LNPISGFKKIFGIRPLKELVKALLYLLAFGTSIYTFILLWRREVFMLYHAELEEMITQWG 175 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 L + + + + ++ D ++F +K L+M +Q+++ E+K++EGDP +K +++ Sbjct: 176 RLCIIFIFVFLASSLILLLLDTLTELFLFIKDLKMEKQEVKKEYKENEGDPQIKQARKEI 235 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 R + + V++ NPTH ++ + +D + P ++ K A + E Sbjct: 236 HREILSEETKNGIKNSQVVMANPTHIALGIYFDPSVAELPLIIVKAQNAQARAVIAYAEE 295 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQPTHL 366 +P + PLAR LYR+ I I + +L W+ +++ +L + Sbjct: 296 QGIPVVRDIPLARRLYRNNSIFSFIRDDDLLDIMNILIWLKRIELEKLG----------I 345 Query: 367 PVPEALDFINEK 378 +P AL+ IN++ Sbjct: 346 SLPSALESINQE 357 >UniRef50_C2LLU2 Possible flagellar biosynthesis protein FlhB n=4 Tax=Proteus RepID=C2LLU2_PROMI Length = 353 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 88/372 (23%), Positives = 162/372 (43%), Gaps = 24/372 (6%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT +L+ + ++GQ +S+EL S L+ +GV ++ L F Sbjct: 3 EKTEKPTQKKLDDSAKKGQSFKSKELVSGLVYFIGVIYLF---------NQVKLDEFNQF 53 Query: 67 DHSIINDPNLIL--GQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 S++ P I + ++ + +LP+I L I + + ++++ F Sbjct: 54 YQSLLLHPTGISLKSYVEVISKLFFDIVLPIIIVTFLSGAIPSLFSSHFKLATEAIKIDF 113 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 + +NP+ G K++FS +T + LK IL I+ F+ H +++ L + Sbjct: 114 NHINPISGFKKIFSIRTIKDFLKTILFIIIFLITCYVFMILHMGEVVILYRADLEGVIDK 173 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 LV + + IP++ ++ F +K + M + +++ E K EG+P +K R Sbjct: 174 WCSLVVSFIFIFFILSIPILILNIIADFFLFIKDMMMEKHEVKQEHKNMEGNPEIKSVRR 233 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q+ + M + + ++ NPTH +V + +D + P V AL ++ Sbjct: 234 QLHQELLDEPMKRVIRDSSAVIVNPTHVAVGIYFDPDNGIMPIVSLSCTNAKALAVKAYA 293 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQPT 364 + P + P LAR L+ + + I Q V +VL W LKR + G R Sbjct: 294 KKVGTPVIRYPELARKLHHKYHLFEVIIDQDLLDVMDVLIW---LKRVEIEGLSR----- 345 Query: 365 HLPVPEALDFIN 376 E +D+IN Sbjct: 346 -----EEMDYIN 352 >UniRef50_P40702 Surface presentation of antigens protein spaS n=62 Tax=Enterobacteriaceae RepID=SPAS_SALTY Length = 356 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 80/365 (21%), Positives = 164/365 (44%), Gaps = 13/365 (3%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PT RLE + ++GQ +S++L + L G++ + G + Sbjct: 2 SSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIAD 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 +FD S+ + + G + L+P + ++ + + ++ G V + ++L+P Sbjct: 62 NFDQSMADYSLAVFGI-------GLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNL 114 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 S LNP+ G K++FS +T + +K +L V W + + I + Sbjct: 115 SALNPVEGAKKLFSMRTVKDTVKTLLYLSSF-VVAAIICWKKYKVEIFSQLNGNIVGIAV 173 Query: 185 AMDLVGLCALLVVLG-VIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRI 243 + L +L L + ++ D + F +K ++M +++++ E K+ EG+P VK + Sbjct: 174 IWRELLLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKR 233 Query: 244 RQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREI 303 R++ ++ +D+ + +IV NPTH ++ + + M P + AL +R Sbjct: 234 REVHMEILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAY 293 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQP 363 + VP + LAR+L++ + + V +L W+ +++ G+ +QP Sbjct: 294 AEKVGVPVIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVEN----AGKDVIQP 349 Query: 364 THLPV 368 V Sbjct: 350 QENEV 354 >UniRef50_A5G0E6 Type III secretion exporter n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0E6_ACICJ Length = 335 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 91/321 (28%), Positives = 167/321 (52%), Gaps = 2/321 (0%) Query: 29 SRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREA 88 SRE+ +L L V ++V+ S A RL+ L++ + ++ + + + Sbjct: 9 SREVATLASLGVALAVMIGVLPSSAERLANTLASAFT-RAATVDSGAGLSRALWQAGMAS 67 Query: 89 MLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKA 148 + +P + L A++ ++ G + ++ F++LNPL GI ++F A ++ Sbjct: 68 LGVFIPFAGAIALSAIVVSLLQTGFRTNWGAIGLNFARLNPLAGIGKLFGTPNLAASGQS 127 Query: 149 ILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDV 208 ILK +G+ + + ++ S T + + V+ + D Sbjct: 128 ILKLAAIGAALYVVMDARLHGLEAMLLGSEKTLLAAIFGSIVAILSAAVMIQVVSGAVDF 187 Query: 209 FFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNN 268 ++MSRQ+++DE K+++GDPHV+ RI+ + A A+R + + +A V++ N Sbjct: 188 VLVRNRFSTSVKMSRQEVKDEQKETDGDPHVRARIKAARSALAKRSLNVAMARAAVVITN 247 Query: 269 PTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIG 328 PTHY+VAL+Y + APK+VAKGA A RIR++ E +P + PPLARAL++ ++ Sbjct: 248 PTHYAVALEYRAGQAEAPKIVAKGADERAARIRDLAREARIPIVANPPLARALFQQ-DVE 306 Query: 329 QQIPGQLYAAVAEVLAWVWQL 349 +I + Y AVAE++A++W+L Sbjct: 307 TEILPEHYRAVAEIIAYIWKL 327 >UniRef50_Q9KKG9 YsaU n=9 Tax=cellular organisms RepID=Q9KKG9_YEREN Length = 374 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 75/376 (19%), Positives = 169/376 (44%), Gaps = 8/376 (2%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT ++ + ++GQ +S+++ + ++ + G S L +L L Sbjct: 3 EKTEKPTDKKIRDSAKKGQSFKSKDMVAAVV--LVAGAFAISGFSSLYGLGSLLQRILLS 60 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 I + + L + A++P++ L I ++ + ++++ FS Sbjct: 61 PSDI-----GVEALLDKLYSLFLQAVVPVLLACFLPGAIISLLQSRFRLATEAVKIDFSH 115 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LNP+ G K++F+ ++ EL+KA L ++ + F ++ L + + Sbjct: 116 LNPISGFKKIFALRSLKELVKAFLYLLVFATSAAVFFIFWRQEIFMLYRTTINGMISQWA 175 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 L ++ + + ++ D + F +K L+M +Q+++ E+K ++GDPH+K R + Sbjct: 176 HLCITFIMVFLAVALLILLIDTLTEFFLFMKDLKMEKQEVKKEYKDNDGDPHIKSARRGL 235 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 + + ++V + ++ NPTH ++ + Y+++ P ++ K GL A + Sbjct: 236 HQEILSEEVKSNVRGSTFVMANPTHIAMVIYYNDDIAPLPYLMMKTRGLQAKAVIAYAES 295 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQPTHL 366 VP + P+AR L+R+ I Q V ++ W+ +++ ++ L Sbjct: 296 QGVPVVRDIPVARQLWRNYRKDSFINDQGLDDVMHIINWLVRVELVKMGIDVD-AALEQL 354 Query: 367 PVPEALDFINEKPTHE 382 A D + ++ T++ Sbjct: 355 EADNAADPLAQEETND 370 >UniRef50_A7H8A9 Type III secretion exporter n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7H8A9_ANADF Length = 343 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 179/346 (51%), Gaps = 7/346 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + D+TE PTP RL +AR G + + REL L G+ + G S+ R L+ +L A L Sbjct: 2 TGDRTERPTPKRLREARRRGDVAQGRELGGAAALAGGLLALALTGPSMTRELASLLRAQL 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 DP +L ++ + LA S + A+++ + G VF+ +L P+ Sbjct: 62 QAAAQPSADPAALLHAALVTVGRLALAPA---SAALAAAVLAGALQTGFVFAPGALSPRA 118 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 ++NPL G++R+ S + +L + K ++ V +L P + L A+ Sbjct: 119 ERVNPLRGLRRLLSPASALAVLLGLAKAAVLLGVAVVWLRSAAPSLAGLARLDAR-ALWG 177 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 ++ ++G +V + DV F H + LRM+R ++R E K+ EGDP + R Sbjct: 178 SLPMLGGLVARLVAAYALLALGDVALARFRHRRALRMTRDEVRREHKEDEGDPAHRAERR 237 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 ++ RA V +A V+V NPTH +VAL++D + AP+VVAKG+G A RIR Sbjct: 238 RLHRALLE---AGPVSRATVVVVNPTHVAVALRHDRDGEDAPRVVAKGSGPAAARIRSAA 294 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 VP + PLARAL+R AE+G +IP +LY A A VLA ++ L+ Sbjct: 295 RRAGVPIVRDVPLARALHRLAEVGDEIPEELYEAAAAVLAHLYGLE 340 >UniRef50_Q3JL20 Secretion apparatus protein bsaZ n=37 Tax=Proteobacteria RepID=BSAZ_BURP1 Length = 411 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 75/358 (20%), Positives = 155/358 (43%), Gaps = 11/358 (3%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT +L A ++GQ ++R++ +L+++ G A L + F Sbjct: 3 EKTEKPTAKKLRDAAKKGQTFKARDIVALIVIATGALA--------APALVDLTRIAAEF 54 Query: 67 DHSIINDPNLILGQIILLIREAMLALL-PLISGVVLVALISPVMLGGLVFSGKSLQPKFS 125 G + L + P + + ++ + +S++ + Sbjct: 55 VRIASTGAQPNPGAYAFAWAKLFLRIAAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLT 114 Query: 126 KLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNA 185 L+P+ G+KR+FS ++ + +KA+L + F + + L P Sbjct: 115 ALDPVKGMKRLFSWRSAKDAVKALLYVGVFALTVRVFAGLYHADVFGLFRARPALLGHMW 174 Query: 186 MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQ 245 + L LL +L +P++ D + F + ++L+M + +++ E+K+SEG+ +K + R+ Sbjct: 175 IVLTVRLVLLFLLCALPVLILDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEIKSKRRE 234 Query: 246 MQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGA 305 + + + A+V ++D IV NPTH ++ + + + + P V + AL + Sbjct: 235 IHQELLSEEIKANVEQSDFIVANPTHIAIGVYVNPDIVPIPFVSVRETNARALAVIRHAE 294 Query: 306 ENNVPTLEAPPLARALYRHAE-IGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQ 362 VP + LAR++YR++ + V VL W+ +++ GG P Sbjct: 295 ACGVPVVRNVALARSIYRNSPRRYSFVSHDDIDGVMRVLIWLGEVEAANR-GGPPPET 351 >UniRef50_D2UDN8 Probable xanthomonas secretion apparatus protein n=1 Tax=Xanthomonas albilineans RepID=D2UDN8_XANAL Length = 358 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 74/350 (21%), Positives = 151/350 (43%), Gaps = 8/350 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS +KTE PT + + ++G+ ++ ++ ++L+L+VG I F + + Sbjct: 1 MS----EKTEKPTQKKRADSEKKGKSFKAADIGAMLLLIVGGVAIPFLFD--FDSIFSLF 54 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L D + L A+ + I + ++ L + ++ Sbjct: 55 K--LFGSAVQAKDLPGPFAYVKTLGWVAVKGTVIFIVVCSFATTVPSLIQSRLTLAFDAI 112 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + F LNP G+K++F+ + +L+K +L I + F+ +H ++ M Sbjct: 113 RFDFDALNPANGLKKLFNIRVAKDLVKTLLYIITTSAAVAIFIHNHCRELFMTMRMPEFA 172 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 L L ++ IP++ D + F ++ L+M + +++ E KQS+G+P VK Sbjct: 173 LCSELGHLAKYLCLYMIGMAIPVLVLDCLTEYFLYIHGLKMEKYEVKQEIKQSQGNPEVK 232 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R RQ+ R ++ +V + ++ NPTH ++ + D P V + A + Sbjct: 233 SRQRQLSREVLSEKVKENVKGSTFVLANPTHIAIGIYADFKVAPFPMVSVREVDARAREV 292 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 + + VP L PLAR ++ + Q + + + +L W+ Q++ Sbjct: 293 IDYAMKCGVPVLRDIPLARRIFDRTQRYQFVSTEDLEPIIRILTWLRQVE 342 >UniRef50_C3KN95 Translocation protein in type III secretion system, RhcU n=1 Tax=Rhizobium sp. NGR234 RepID=C3KN95_RHISN Length = 345 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 74/346 (21%), Positives = 155/346 (44%), Gaps = 8/346 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ S++K+ + ++ AR +GQ+ S ++ S +++L +++ SL ++ +L Sbjct: 1 MSETSEEKSLPASDKKIRDARRKGQVMHSPDMVSGIVVLFSTLFLFYVAPSLQVKIERLL 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLA-LLPLISGVVLVALISPVMLG-GLVFSGK 118 H D + ++ + +A+ +LP++ ++ L + V + G VFS + Sbjct: 61 DEASHIYERPFAD---VWYRLSTIAADALWTTVLPILGITIVAILATNVAITKGFVFSAE 117 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L P F+++NP G+KR+ S ++ + KA+ K + + + Sbjct: 118 PLAPDFNRVNPASGLKRIASLKSVVDFGKALFKIAALSIAFAVVFHAGLGSLFQSPTCGF 177 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 ++ ++ + + + M D+F Q + L+++RM+R + + E K +EGDP Sbjct: 178 ACLHATSLSMLKTITSIAIAAFVVMGAVDLFLQRWLFLREMRMTRSESKREHKDTEGDPL 237 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 ++ R++ R + A +++ SV ++Y ++ P VV + G A Sbjct: 238 IRQERRKLARLL--GTTKTGLAGAVLLIGEEGAVSVGIRYVRDETPVPIVVCRAFGPAAS 295 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLA 344 +R +P + LA L IG +P +L+ VA L Sbjct: 296 SMRAQARSRTIPFMADAKLAAEL-GKTPIGAPVPDRLFQEVANALV 340 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B2T7B1 Flagellar biosynthetic protein FlhB n=18 Tax=Bur... 458 e-127 UniRef50_B8GQZ9 Flagellar biosynthetic protein FlhB n=8 Tax=Gamm... 453 e-126 UniRef50_Q46PH4 Flagellar biosynthetic protein FlhB n=1 Tax=Rals... 450 e-125 UniRef50_A3DCP3 Flagellar biosynthetic protein FlhB n=14 Tax=Clo... 446 e-124 UniRef50_Q31HN4 Flagellar biosynthetic protein FlhB n=1 Tax=Thio... 442 e-123 UniRef50_Q2SBX1 Flagellar biosynthesis pathway, component FlhB n... 441 e-122 UniRef50_Q085L7 Flagellar biosynthetic protein FlhB n=70 Tax=Gam... 441 e-122 UniRef50_C1D4I4 FlhB1 n=1 Tax=Laribacter hongkongensis HLHK9 Rep... 441 e-122 UniRef50_Q56886 Flagellar biosynthetic protein flhB n=153 Tax=ce... 439 e-122 UniRef50_A6SZT0 FlhB flagellar biosynthetic protein n=14 Tax=Bet... 438 e-121 UniRef50_Q3JY73 Flagellar biosynthetic protein FlhB n=61 Tax=cel... 436 e-121 UniRef50_A6W0V5 Flagellar biosynthetic protein FlhB n=2 Tax=Mari... 436 e-121 UniRef50_B8FK32 Flagellar biosynthetic protein FlhB n=4 Tax=Bact... 435 e-120 UniRef50_B9Z6P8 Flagellar biosynthetic protein FlhB n=1 Tax=Luti... 434 e-120 UniRef50_A5I580 Flagellar biosynthetic protein n=19 Tax=Bacteria... 432 e-119 UniRef50_Q0AYL8 Flagellar biosynthesis/type III secretory pathwa... 431 e-119 UniRef50_D0I461 Flagellar biosynthesis protein FlhB n=2 Tax=Vibr... 430 e-119 UniRef50_B8CYQ0 Flagellar biosynthetic protein FlhB n=1 Tax=Halo... 430 e-119 UniRef50_P35538 Flagellar biosynthetic protein flhB n=10 Tax=Bac... 430 e-119 UniRef50_A1WUA6 Flagellar biosynthetic protein FlhB n=3 Tax=Gamm... 429 e-119 UniRef50_Q2LT07 Flagellar biosynthesis pathway component n=1 Tax... 429 e-118 UniRef50_C0ZF82 Flagellar biosynthetic protein FlhB n=4 Tax=Paen... 428 e-118 UniRef50_Q1NP88 Flagellar biosynthetic protein FlhB n=2 Tax=Delt... 428 e-118 UniRef50_A1HN21 Flagellar biosynthetic protein FlhB n=2 Tax=Veil... 427 e-118 UniRef50_A0L3J7 Flagellar biosynthetic protein FlhB n=1 Tax=Magn... 426 e-118 UniRef50_C3K0I5 Putative flagellar biosynthesis-related protein ... 426 e-118 UniRef50_Q3J977 Flagellar biosynthetic protein FlhB n=3 Tax=Gamm... 426 e-118 UniRef50_B9ZRA6 Flagellar biosynthetic protein FlhB n=1 Tax=Thio... 425 e-117 UniRef50_B1HQX6 Flagellar biosynthetic protein n=17 Tax=Bacillac... 424 e-117 UniRef50_Q2Y9F9 Flagellar biosynthetic protein FlhB n=2 Tax=Beta... 423 e-117 UniRef50_B8EA03 Flagellar biosynthetic protein FlhB n=22 Tax=Gam... 423 e-117 UniRef50_UPI0001BCCDC9 flagellar biosynthesis/type III secretory... 422 e-116 UniRef50_B2A365 Flagellar biosynthetic protein FlhB n=3 Tax=Bact... 422 e-116 UniRef50_C9LSQ5 Flagellar biosynthetic protein FlhB n=1 Tax=Sele... 422 e-116 UniRef50_A4J750 Flagellar biosynthetic protein FlhB n=1 Tax=Desu... 421 e-116 UniRef50_B2UHW8 Flagellar biosynthetic protein FlhB n=6 Tax=Rals... 421 e-116 UniRef50_C4ZAM8 Flagellar biosynthesis/type III secretory pathwa... 420 e-116 UniRef50_A6GUU4 Flagellar biosynthetic protein FlhB n=1 Tax=Limn... 419 e-115 UniRef50_A6F9S1 Flagellar biosynthetic protein n=1 Tax=Moritella... 418 e-115 UniRef50_A0Z390 Flagellar biosynthetic protein FlhB n=3 Tax=uncl... 418 e-115 UniRef50_C9XJ38 Flagellar export protein n=7 Tax=Bacteria RepID=... 418 e-115 UniRef50_D0KYP0 Flagellar biosynthetic protein FlhB n=1 Tax=Halo... 418 e-115 UniRef50_B4RUM4 Flagellar biosynthesis protein n=3 Tax=Alteromon... 417 e-115 UniRef50_C4G684 Putative uncharacterized protein n=1 Tax=Abiotro... 417 e-115 UniRef50_C1SNG6 Flagellar biosynthetic protein FlhB n=1 Tax=Deni... 417 e-115 UniRef50_C9PBY4 Flagellar biosynthesis protein FlhB n=4 Tax=Vibr... 414 e-114 UniRef50_Q2W9Q2 Flagellar biosynthesis pathway n=3 Tax=Magnetosp... 414 e-114 UniRef50_UPI0001C3562E flagellar biosynthesis protein FlhB n=1 T... 414 e-114 UniRef50_A5D0H9 Flagellar biosynthesis pathway, component FlhB n... 413 e-114 UniRef50_Q47I36 Flagellar biosynthetic protein FlhB n=1 Tax=Dech... 413 e-114 UniRef50_C6MMA1 Flagellar biosynthetic protein FlhB n=1 Tax=Geob... 411 e-113 UniRef50_B1LC25 Flagellar biosynthetic protein FlhB n=6 Tax=Ther... 411 e-113 UniRef50_B9L5B0 Flagellar biosynthetic protein FlhB n=2 Tax=Ther... 411 e-113 UniRef50_Q0ANB5 Flagellar biosynthetic protein FlhB n=3 Tax=Hyph... 411 e-113 UniRef50_Q3ADC9 Flagellar biosynthetic protein FlhB n=2 Tax=Bact... 411 e-113 UniRef50_C5EFG7 Flagellar export protein n=3 Tax=Clostridiales R... 410 e-113 UniRef50_A1VY54 Flagellar biosynthetic protein FlhB n=27 Tax=Eps... 409 e-113 UniRef50_A6D5X3 Flagellar biosynthetic protein n=4 Tax=Gammaprot... 409 e-113 UniRef50_Q3V867 Flagellar biosynthetic protein FlhB n=5 Tax=Legi... 409 e-112 UniRef50_Q3A5E5 Flagellar biosynthetic protein FlhB n=3 Tax=Delt... 409 e-112 UniRef50_A8TPM3 Flagellar biosynthesis protein B n=1 Tax=alpha p... 409 e-112 UniRef50_Q97H65 FliR/FlhB fusion protein n=1 Tax=Clostridium ace... 408 e-112 UniRef50_C5S862 Flagellar biosynthetic protein FlhB n=1 Tax=Allo... 407 e-112 UniRef50_A6M184 Flagellar biosynthetic protein FlhB n=4 Tax=Bact... 407 e-112 UniRef50_C6NWP2 Flagellar biosynthesis protein FlhB n=2 Tax=Prot... 406 e-112 UniRef50_A7K1M6 Flagellar biosynthesis protein FlhB n=13 Tax=Vib... 406 e-112 UniRef50_B8FTQ2 Flagellar biosynthetic protein FlhB n=2 Tax=Desu... 404 e-111 UniRef50_A8MHF6 Flagellar biosynthetic protein FlhB n=2 Tax=Alka... 404 e-111 UniRef50_C5RFV5 Flagellar biosynthetic protein FlhB n=1 Tax=Clos... 403 e-111 UniRef50_B0TNN8 Flagellar biosynthetic protein FlhB n=7 Tax=Shew... 403 e-111 UniRef50_Q6MI50 Flagella-associated protein n=1 Tax=Bdellovibrio... 403 e-111 UniRef50_C0C1N4 Putative uncharacterized protein n=1 Tax=Clostri... 402 e-111 UniRef50_A7FED7 Flagellar biosynthetic protein FlhB n=25 Tax=Ent... 402 e-111 UniRef50_B8CVM2 Flagellar biosynthetic protein FlhB n=1 Tax=Shew... 401 e-110 UniRef50_Q67K27 Flagellar biosynthesis protein n=1 Tax=Symbiobac... 401 e-110 UniRef50_Q1YV76 Flagellar biosynthetic protein FlhB n=1 Tax=gamm... 400 e-110 UniRef50_D1B6A6 Flagellar biosynthetic protein FlhB n=1 Tax=Ther... 400 e-110 UniRef50_B0MPC8 Putative uncharacterized protein n=1 Tax=Eubacte... 399 e-109 UniRef50_B2SN53 Flagellar biosynthetic protein FlhB n=14 Tax=Xan... 399 e-109 UniRef50_P57334 Flagellar biosynthetic protein flhB n=4 Tax=Buch... 398 e-109 UniRef50_C1ZJL2 Flagellar biosynthetic protein FlhB n=1 Tax=Plan... 398 e-109 UniRef50_C1DW37 Flagellar biosynthetic protein FlhB n=3 Tax=Sulf... 397 e-109 UniRef50_Q2NX25 Flagellar biosynthetic protein FlhB n=7 Tax=Ente... 397 e-109 UniRef50_A4XIZ4 Flagellar biosynthetic protein FlhB n=2 Tax=Clos... 397 e-109 UniRef50_A2SKE1 Flagellar biosynthesis protein n=2 Tax=Burkholde... 396 e-109 UniRef50_Q316G6 Flagellar biosynthetic protein FlhB n=7 Tax=Desu... 396 e-109 UniRef50_A8F4V6 Flagellar biosynthetic protein FlhB n=1 Tax=Ther... 395 e-108 UniRef50_B5YIY9 Flagellar biosynthetic protein FlhB n=1 Tax=Ther... 395 e-108 UniRef50_C2ED97 Flagellar biosynthesis protein FlhB n=5 Tax=Lact... 395 e-108 UniRef50_B0THC3 Flagellar biosynthetic protein flhb, putative n=... 394 e-108 UniRef50_B3EAW0 Flagellar biosynthetic protein FlhB n=8 Tax=Desu... 394 e-108 UniRef50_Q1D9K3 FlhB/HrpN/YscU/SpaS family protein n=3 Tax=Cysto... 393 e-108 UniRef50_A7HWA1 Flagellar biosynthetic protein FlhB n=9 Tax=Alph... 392 e-108 UniRef50_B4U884 Flagellar biosynthetic protein FlhB n=3 Tax=Bact... 392 e-108 UniRef50_C5SN70 Flagellar biosynthetic protein FlhB n=1 Tax=Asti... 392 e-107 UniRef50_Q3V7G4 Flagellar biosynthetic protein flhB n=2 Tax=Prot... 391 e-107 UniRef50_B6IS89 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 390 e-107 UniRef50_C8W1H2 Flagellar biosynthetic protein FlhB n=1 Tax=Desu... 390 e-107 UniRef50_A4YXU5 Flagellar biosynthetic protein FlhB n=12 Tax=Bra... 390 e-107 UniRef50_Q0EZ55 Flagellar biosynthesis protein n=1 Tax=Mariprofu... 389 e-107 UniRef50_UPI00016C3B58 flagellar biosynthesis protein FlhB n=1 T... 388 e-106 UniRef50_Q2P9D1 HrcU protein n=12 Tax=Xanthomonas RepID=Q2P9D1_X... 388 e-106 UniRef50_A9KNE0 Flagellar biosynthetic protein FlhB n=1 Tax=Clos... 388 e-106 UniRef50_C0QA53 FlhB2 n=1 Tax=Desulfobacterium autotrophicum HRM... 387 e-106 UniRef50_A9BHY6 Flagellar biosynthetic protein FlhB n=1 Tax=Petr... 387 e-106 UniRef50_D0XSL6 Flagellar biosynthetic protein FlhB n=1 Tax=Brev... 385 e-106 UniRef50_C8WWG5 Flagellar biosynthetic protein FlhB n=2 Tax=Alic... 385 e-105 UniRef50_C4Z5H8 Flagellar biosynthetic protein FlhB n=5 Tax=Bact... 385 e-105 UniRef50_B1K3A0 Type III secretion exporter n=13 Tax=Betaproteob... 385 e-105 UniRef50_A8U5W0 Flagellar biosynthesis protein B n=1 Tax=Carnoba... 384 e-105 UniRef50_B6QWX7 Translocation protein in type III secretion n=2 ... 384 e-105 UniRef50_D0IYF3 Type III secretion exporter n=11 Tax=Comamonadac... 384 e-105 UniRef50_B8J3L1 Flagellar biosynthetic protein FlhB n=5 Tax=Desu... 384 e-105 UniRef50_Q1I766 Flagellar biosynthetic protein FlhB n=22 Tax=Gam... 383 e-105 UniRef50_B1I5J8 Flagellar biosynthetic protein FlhB n=1 Tax=Cand... 382 e-105 UniRef50_Q2SH55 Type III secretory pathway, component EscU n=1 T... 382 e-104 UniRef50_A7HLM7 Flagellar biosynthetic protein FlhB n=3 Tax=Ther... 382 e-104 UniRef50_Q7UXG2 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 381 e-104 UniRef50_B2TLW3 Flagellar biosynthetic protein FliR/FlhB n=6 Tax... 381 e-104 UniRef50_A1T0L4 Flagellar biosynthetic protein FlhB n=1 Tax=Psyc... 381 e-104 UniRef50_B9Z4S0 Type III secretion exporter n=1 Tax=Lutiella nit... 380 e-104 UniRef50_Q1NGK4 Flagellar biosynthetic protein n=1 Tax=Sphingomo... 378 e-103 UniRef50_UPI0001C312BE flagellar biosynthetic protein FlhB n=1 T... 378 e-103 UniRef50_Q5DY36 Lateral flagellar export/assembly protein (FlhB-... 377 e-103 UniRef50_A6Q2P0 Flagellar biosynthetic protein FlhB n=2 Tax=Bact... 377 e-103 UniRef50_C9NX90 Type III secretion inner membrane protein HrpY n... 377 e-103 UniRef50_C2KYZ7 Flagellar biosynthesis protein FlhB n=1 Tax=Orib... 375 e-102 UniRef50_B3PPK9 Flagellar biosynthesis transmembrane protein n=1... 375 e-102 UniRef50_C6WJP3 Type III secretion exporter n=1 Tax=Actinosynnem... 374 e-102 UniRef50_B6AMB2 Flagellar biosynthesis protein, FlhB n=1 Tax=Lep... 374 e-102 UniRef50_Q1Q6S5 Similar to flagellar biosynthetic protein FlhB n... 373 e-102 UniRef50_B6IQA2 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 373 e-102 UniRef50_A4SI11 Lateral flagellar biosynthetic protein, LfhB n=2... 373 e-102 UniRef50_C8WBS8 Type III secretion exporter n=3 Tax=Zymomonas mo... 372 e-101 UniRef50_P69986 Yop proteins translocation protein U n=49 Tax=Ga... 372 e-101 UniRef50_Q2RKD2 Flagellar biosynthetic protein FlhB n=5 Tax=Bact... 372 e-101 UniRef50_A4Y0Q6 Flagellar biosynthetic protein FlhB n=1 Tax=Pseu... 372 e-101 UniRef50_C4XT81 Flagellar biosynthetic protein FlhB n=1 Tax=Desu... 369 e-101 UniRef50_UPI0001744A09 Type III secretory pathway, component Esc... 369 e-101 UniRef50_Q8D3G7 FlhB protein n=1 Tax=Wigglesworthia glossinidia ... 369 e-100 UniRef50_A3D418 Type III secretion protein, YscU/HrpY family n=1... 368 e-100 UniRef50_Q5FQT1 Flagellar biosynthetic protein FlhB n=1 Tax=Gluc... 367 e-100 UniRef50_C8WYW8 Flagellar biosynthetic protein FlhB n=1 Tax=Desu... 367 e-100 UniRef50_A1TJC2 Type III secretion protein, YscU/HrpY family n=5... 367 e-100 UniRef50_A1SEN0 Type III secretion exporter n=1 Tax=Nocardioides... 367 e-100 UniRef50_Q0G102 Flagellar biosynthesis protein B n=3 Tax=Rhizobi... 366 e-100 UniRef50_C2KTQ0 Flagellar biosynthesis protein FlhB n=3 Tax=Mobi... 366 e-100 UniRef50_A0P0L7 Translocation protein in type III secretion n=1 ... 365 1e-99 UniRef50_D2S977 Type III secretion exporter n=1 Tax=Geodermatoph... 365 2e-99 UniRef50_Q0FML8 Flagellar biosynthesis protein B n=4 Tax=Rhodoba... 365 2e-99 UniRef50_A4TRY5 Type III secretion apparatus protein n=30 Tax=En... 365 2e-99 UniRef50_A5V2R9 Type III secretion exporter n=2 Tax=Sphingomonad... 364 4e-99 UniRef50_A6W8L6 Type III secretion exporter n=1 Tax=Kineococcus ... 362 1e-98 UniRef50_D2TZS1 Type III secretion inner membrane protein YscU,S... 361 2e-98 UniRef50_C0GJG3 Type III secretion exporter n=1 Tax=Dethiobacter... 360 3e-98 UniRef50_Q2SC29 Type III secretory pathway, component EscU n=1 T... 360 6e-98 UniRef50_A8IPK5 Flagellar biosynthetic protein n=14 Tax=Alphapro... 358 2e-97 UniRef50_O54243 Flagellar biosynthetic protein flhB n=46 Tax=Rhi... 358 3e-97 UniRef50_Q4JMS7 Predicted flagellar biosynthetic protein n=1 Tax... 357 3e-97 UniRef50_B2IK02 Flagellar biosynthetic protein FlhB n=1 Tax=Beij... 357 4e-97 UniRef50_Q9ZL73 Flagellar biosynthetic protein flhB n=16 Tax=Hel... 356 6e-97 UniRef50_A3SFT1 Flagella-associated protein n=2 Tax=Sulfitobacte... 356 6e-97 UniRef50_Q84CR0 Putative type III secretion protein n=3 Tax=Bord... 356 8e-97 UniRef50_Q1MQX2 Translocation protein in type III secretion n=6 ... 356 9e-97 UniRef50_P96069 Secretion system apparatus protein ssaU n=35 Tax... 355 1e-96 UniRef50_D0DA90 Flagellar biosynthetic protein FlhB n=1 Tax=Citr... 355 1e-96 UniRef50_O67813 Flagellar biosynthetic protein flhB n=1 Tax=Aqui... 355 1e-96 UniRef50_B7QTP8 Type III secretion exporter n=1 Tax=Ruegeria sp.... 355 2e-96 UniRef50_C6HWM0 Flagellar biosynthetic protein FlhB n=1 Tax=Lept... 355 2e-96 UniRef50_A1UTV9 Flagellar biosynthetic protein FlhB n=1 Tax=Bart... 354 2e-96 UniRef50_D0MGA4 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 354 3e-96 UniRef50_A8EW41 Flagellar biosynthetic protein FlhB n=1 Tax=Arco... 354 3e-96 UniRef50_D2NZE2 Flagellar biosynthesis protein FlhB n=21 Tax=Lis... 354 3e-96 UniRef50_B1ZR29 Type III secretion exporter n=1 Tax=Opitutus ter... 354 4e-96 UniRef50_C6NYG2 Flagellar biosynthesis protein FlhB n=1 Tax=Acid... 353 6e-96 UniRef50_B1LWT8 Flagellar biosynthetic protein FlhB n=8 Tax=Meth... 352 9e-96 UniRef50_Q2RQH7 Flagellar biosynthetic protein FlhB n=1 Tax=Rhod... 352 1e-95 UniRef50_C1A547 Flagellar biosynthesis protein FlhB n=1 Tax=Gemm... 352 2e-95 UniRef50_UPI00019F17CC secretion system apparatus protein SsaU n... 351 2e-95 UniRef50_B8H3H7 Flagellar biosynthesis protein FlhB n=6 Tax=Caul... 351 2e-95 UniRef50_C1F996 Flagellar biosynthetic protein FlhB n=1 Tax=Acid... 351 2e-95 UniRef50_B5JK52 FlhB/HrpN/YscU/SpaS family n=1 Tax=Verrucomicrob... 350 5e-95 UniRef50_C4PLU4 Type III secretion system inner membrane protein... 349 7e-95 UniRef50_A0RCA2 Flagellar biosynthetic protein n=72 Tax=Bacillus... 349 8e-95 UniRef50_D1BCL3 Flagellar biosynthesis pathway, component FlhB n... 349 2e-94 UniRef50_C7R0I2 Type III secretion exporter n=1 Tax=Jonesia deni... 349 2e-94 UniRef50_Q2RZE8 Flagellar biosynthetic protein flhB n=1 Tax=Sali... 348 2e-94 UniRef50_Q89AN6 Flagellar biosynthetic protein flhB n=1 Tax=Buch... 348 3e-94 UniRef50_B1Z5N7 Type III secretion exporter n=4 Tax=Burkholderia... 347 5e-94 UniRef50_A3V235 Flagellar protein FlhB n=2 Tax=Rhodobacterales R... 347 5e-94 UniRef50_Q1GCC9 Flagellar biosynthetic protein flhB n=3 Tax=Rhod... 346 7e-94 UniRef50_D2R543 Type III secretion exporter n=3 Tax=Bacteria Rep... 344 4e-93 UniRef50_B9KJE4 Flagellar biosynthetic protein FlhB n=7 Tax=Rhod... 342 1e-92 UniRef50_A8LMR4 Flagellar biosynthesis protein FlhB n=3 Tax=Rhod... 339 8e-92 UniRef50_Q01PP8 Type III secretion exporter n=1 Tax=Candidatus S... 339 1e-91 UniRef50_C6QF02 Type III secretion exporter n=1 Tax=Hyphomicrobi... 339 1e-91 UniRef50_A9HH78 Putative flagellar biosynthetic protein flhB n=1... 338 1e-91 UniRef50_A5P6J3 Type III secretion exporter n=2 Tax=Erythrobacte... 337 4e-91 UniRef50_C3XFW9 Flagellar biosynthesis protein FlhB n=3 Tax=Heli... 337 6e-91 UniRef50_A3NKX0 Type III secretion protein, YscU/HrpY family n=2... 336 7e-91 UniRef50_C6N718 Putative flagellar biosynthetic protein FlhB n=1... 336 1e-90 UniRef50_A6GN26 Type III secretion component protein SctU n=1 Ta... 334 3e-90 UniRef50_C5CXN4 Type III secretion exporter n=1 Tax=Variovorax p... 334 3e-90 UniRef50_A0LT73 Type III secretion exporter n=1 Tax=Acidothermus... 333 5e-90 UniRef50_O85640 Secretion system apparatus protein SsaU n=26 Tax... 333 7e-90 UniRef50_Q04SD5 Endoflagellar biosynthesis protein n=4 Tax=Lepto... 332 1e-89 UniRef50_D0ZDM3 Type III secretion apparatus protein n=5 Tax=Edw... 331 3e-89 UniRef50_Q1IR59 Type III secretion exporter n=1 Tax=Candidatus K... 330 4e-89 UniRef50_A1B5B9 Type III secretion exporter n=3 Tax=Rhodobactera... 330 6e-89 UniRef50_B0SDH0 Endoflagellar biosynthesis protein n=2 Tax=Lepto... 330 7e-89 UniRef50_P35652 Hypersensitivity response secretion protein hrcU... 329 9e-89 UniRef50_Q28JK7 Flagellar biosynthetic protein FlhB n=1 Tax=Jann... 329 1e-88 UniRef50_Q1NCU7 YscU; putative type III secretion protein n=1 Ta... 328 1e-88 UniRef50_Q6MD75 Putative type III secretion pathway protein sctU... 327 3e-88 UniRef50_C6XFL0 Flagellar biosynthesis protein FlhB n=1 Tax=Cand... 326 9e-88 UniRef50_C0AA48 Type III secretion exporter n=1 Tax=Opitutaceae ... 326 9e-88 UniRef50_C6CGR8 Type III secretion protein, YscU/HrpY family n=2... 324 4e-87 UniRef50_Q12T86 Type III secretion exporter n=1 Tax=Shewanella d... 324 4e-87 UniRef50_C8BNV0 HrcU n=6 Tax=Gammaproteobacteria RepID=C8BNV0_PSESY 322 1e-86 UniRef50_Q1D0P0 Type III secretion protein, FlhB/HrpN/YscU/SpaS ... 322 1e-86 UniRef50_O83710 Flagellar biosynthetic protein flhB n=4 Tax=Trep... 321 2e-86 UniRef50_Q44760 Flagellar biosynthetic protein flhB n=23 Tax=Bor... 321 3e-86 UniRef50_Q0C5I7 FlhB/HrpN/YscU/SpaS family protein n=1 Tax=Hypho... 320 6e-86 UniRef50_B1K591 Type III secretion exporter n=1 Tax=Burkholderia... 320 7e-86 UniRef50_B5Y7F6 Flagellar biosynthetic protein FlhB n=1 Tax=Copr... 318 3e-85 UniRef50_Q16DQ8 Flagellar biosynthetic protein FlhB n=15 Tax=Rho... 316 1e-84 UniRef50_Q93PY9 RscU n=4 Tax=Pseudomonas RepID=Q93PY9_PSEFL 315 2e-84 UniRef50_Q2SEX3 Flagellar biosynthesis pathway, component FlhB n... 314 3e-84 UniRef50_C9NP54 Type III secretion protein HrpY n=1 Tax=Vibrio c... 311 3e-83 UniRef50_A6CGV2 Flagellar biosynthetic protein FlhB (Fragment) n... 311 3e-83 UniRef50_A3P7C2 Type III secretion protein, YscU/HrpY family n=3... 311 3e-83 UniRef50_A4WVT4 Type III secretion exporter n=4 Tax=Rhodobactera... 309 9e-83 UniRef50_Q2NVH8 Type III secretion apparatus SpaS n=7 Tax=Entero... 309 1e-82 UniRef50_Q2NR69 Type III secretion apparatus n=5 Tax=Enterobacte... 308 2e-82 UniRef50_C0QXX4 Flagellar biosynthesis protein FlhB n=2 Tax=Brac... 307 4e-82 UniRef50_A2WHV2 Flagellar biosynthesis pathway component FlhB n=... 305 2e-81 UniRef50_A3VS81 Flagellar biosynthetic protein FlhB n=1 Tax=Parv... 303 6e-81 UniRef50_D2LD13 Type III secretion exporter n=1 Tax=Rhodomicrobi... 300 5e-80 UniRef50_D2TZ36 Type III secretion system protein SpaS n=1 Tax=A... 300 5e-80 UniRef50_B3RAC6 SctU: non flagellar T3S system conserved inner m... 297 5e-79 UniRef50_P40702 Surface presentation of antigens protein spaS n=... 295 3e-78 UniRef50_B8HEI9 Type III secretion exporter n=1 Tax=Arthrobacter... 293 6e-78 UniRef50_Q9KKG9 YsaU n=9 Tax=cellular organisms RepID=Q9KKG9_YEREN 292 1e-77 UniRef50_C4UMD4 Putative uncharacterized protein n=1 Tax=Yersini... 292 1e-77 UniRef50_C2LLU2 Possible flagellar biosynthesis protein FlhB n=4... 290 6e-77 UniRef50_A5G0E6 Type III secretion exporter n=1 Tax=Acidiphilium... 289 1e-76 UniRef50_Q3JL20 Secretion apparatus protein bsaZ n=37 Tax=Proteo... 286 6e-76 UniRef50_D2UDN8 Probable xanthomonas secretion apparatus protein... 284 5e-75 UniRef50_C3KN95 Translocation protein in type III secretion syst... 279 1e-73 UniRef50_A7H8A9 Type III secretion exporter n=1 Tax=Anaeromyxoba... 273 9e-72 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_B2T7B1 Flagellar biosynthetic protein FlhB n=18 Tax=Burkholderia RepID=B2T7B1_BURPP Length = 403 Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 183/374 (48%), Positives = 256/374 (68%), Gaps = 1/374 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD +KTE+ TP RL+KAREEGQI RSREL++ +L G +W S+ L GM Sbjct: 1 MAEDSDLEKTESATPRRLQKAREEGQIVRSRELSTFALLAAGFFGVWGMSGSIGEHLQGM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L A FDH+ + ++ + RE + ALLP+++ + AL +P+ LGG S K Sbjct: 61 LRAAFSFDHAGAFETRRMMIGAGVASREGLYALLPILAFTGVAALFAPMALGGWQLSAKG 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+PKF +LNP+ G+ +MFS +L ++ KT++VG + G +W+ +++ L + Sbjct: 121 LEPKFDRLNPIAGLGKMFSINGPIQLGMSLAKTLVVGVIGGTAIWNRREEILALAMQPLH 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ N + L+ +C + V G+ + DV +Q++ KKLRM++++++ E ++SEGDPHV Sbjct: 181 LALANTVHLIAVCCGMTVAGMFVVAAMDVPYQLWQFHKKLRMTKEEVKREHRESEGDPHV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ QRA ARRRMM +VPKADV+V NPTH++VALQY + +M APKVVAKG LVA R Sbjct: 241 KGRIRQQQRAIARRRMMTNVPKADVVVTNPTHFAVALQYTDGEMRAPKVVAKGVNLVAAR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IREI AENNVP LEAPPLARALY + E+ ++IPG LY AVAEVLAWV+QL+R++ GG Sbjct: 301 IREIAAENNVPLLEAPPLARALYHNVELNREIPGPLYGAVAEVLAWVYQLRRFKTEGGDV 360 Query: 360 PVQPTHLPVPEALD 373 P+ PT L VP LD Sbjct: 361 PLAPTELDVPAELD 374 >UniRef50_B8GQZ9 Flagellar biosynthetic protein FlhB n=8 Tax=Gammaproteobacteria RepID=B8GQZ9_THISH Length = 384 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 172/375 (45%), Positives = 239/375 (63%), Gaps = 3/375 (0%) Query: 1 MS---DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M+ D S +K+E PTP RL +ARE+GQ+ RSREL + L+LL G + G + R+ Sbjct: 1 MAENDDSSQEKSEQPTPKRLREAREKGQVARSRELNTTLVLLAGAGAMLVLGGGMLSRIQ 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 M+ + I D + + +IL I E++L LLPL +++ A+ P+ +GG FSG Sbjct: 61 EMVRGSFVLEREAIFDASTMQAMLILRISESLLMLLPLFGILLVAAVAGPIAMGGGGFSG 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 K++ PK++KLNP+ G+KR+FS Q E K + K L+ ++ G LW ++ L +S Sbjct: 121 KAMAPKWNKLNPIAGLKRIFSWQGLMEFGKTLAKFALITAIAGSLLWGLSDSLLGLGYQS 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 +G A +VG LL+ +I + DV FQ+++H K+LRM++Q ++DE+K++EG P Sbjct: 181 LEQGLGRAAWIVGWTFLLLAASLILVALVDVPFQLWNHQKQLRMTKQQVKDEYKETEGKP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 VK RIRQ Q ARRRMMA VPKADV+V NPTHY+VAL+YD+N APKVVAKGA LVA Sbjct: 241 EVKSRIRQTQMEIARRRMMAAVPKADVVVTNPTHYAVALRYDQNGSGAPKVVAKGADLVA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 IRE E VP APPLARA++ + Q+IP LY AVA+VLA+V+QLK AG Sbjct: 301 AEIRERAREAGVPLFPAPPLARAIFYSTRLDQEIPAGLYVAVAQVLAYVYQLKAAGRAGA 360 Query: 358 QRPVQPTHLPVPEAL 372 + PV P LPVP+ L Sbjct: 361 RAPVPPADLPVPDEL 375 >UniRef50_Q46PH4 Flagellar biosynthetic protein FlhB n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PH4_RALEJ Length = 380 Score = 450 bits (1158), Expect = e-125, Method: Composition-based stats. Identities = 185/380 (48%), Positives = 266/380 (70%), Gaps = 1/380 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MSDESD +KTE +P RLEKAREEGQ+ RSREL + ++L+ GV +W G ++ R L + Sbjct: 1 MSDESDLEKTEPASPRRLEKAREEGQVVRSRELATFIMLMTGVIGLWTLGGTIGRSLDTV 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + L F+ + D + +L + +I E++LA +PL+ + A+ +P+++GG FS K+ Sbjct: 61 MRQSLRFEPATAFDTSRMLSRFANVIWESLLAFMPLLLLFGVAAVAAPLLMGGWTFSTKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P F +++P+ G+ RMFS + AEL+KAI K++LVGSV + +WH P + LM Sbjct: 121 LMPNFGRMSPMSGLGRMFSVHSVAELVKAIAKSLLVGSVGAWVVWHRLPDAIALMNAPVQ 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ + +D+V C + VVL ++ + DV +Q + H KKLRMS+++++ EFK+SEGDPH+ Sbjct: 181 EALLHMLDMVLRCCVPVVLSLLLVAAIDVPWQFWEHFKKLRMSKEEVKQEFKESEGDPHI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ QRA ARRRMM +VPKADV+V NPTH++VAL+Y+E +MSAP+V+AKG VA R Sbjct: 241 KGRIRQQQRAMARRRMMQEVPKADVVVTNPTHFAVALRYEEGRMSAPRVIAKGTDEVAAR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+ AE+ +P + APPLARAL+RH ++GQ+IP LY AVAEVLAWV+QLK W + G + Sbjct: 301 IRELAAEHRIPLMSAPPLARALHRHVDLGQEIPAGLYTAVAEVLAWVYQLKHWHYSQGPQ 360 Query: 360 PVQPTHLPVPEALDFINEKP 379 P P+ L VP+ L + Sbjct: 361 PSAPSDLLVPDELAVPESRA 380 >UniRef50_A3DCP3 Flagellar biosynthetic protein FlhB n=14 Tax=Clostridia RepID=A3DCP3_CLOTH Length = 392 Score = 446 bits (1147), Expect = e-124, Method: Composition-based stats. Identities = 126/354 (35%), Positives = 202/354 (57%), Gaps = 2/354 (0%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 ++ +KTE TP + KAREEGQ+ +SREL S ++LL + G + + L Sbjct: 39 DNGEKTEKATPRKRSKAREEGQVLQSRELNSAIVLLSAFVTLRIFGQYMYEEILKCLKVA 98 Query: 64 LHFDH--SIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + + + + + + P++ V++ + S G +F+ K+L Sbjct: 99 ITVYPLNDGLFTIDGLFELYGETVITFLKIATPVLMVVLIAGIGSAYAQVGFLFTTKTLG 158 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 K S++NPL G KR+FS ++ ELLK+I+K LVG + ++ ++ +M +++ Sbjct: 159 IKLSRINPLKGFKRIFSLKSLVELLKSIIKIALVGYIGYGYIKGEMTNVLGMMDVDVVSS 218 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + A+ + + + + D +Q + + K LRMS+Q+I++E K+ EG+P +K Sbjct: 219 ASFLGSTILNAAIRMCIAFVVIGVADYGYQWWEYEKSLRMSKQEIKEENKEVEGNPEIKS 278 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQ QR + RRM+ D+PKADV++ NPTHY+VA++YD + AP VVAKG +ALRI+ Sbjct: 279 RIRQKQRQMSMRRMLQDIPKADVVITNPTHYAVAIKYDPKEADAPVVVAKGQDYMALRIK 338 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 EI E+ V +E PLA+ LY+ EIG +IP +LY AVAEVLA+V+ LK Sbjct: 339 EIAKEHKVEIVENKPLAQTLYKTVEIGGKIPPELYQAVAEVLAFVYSLKEKMKK 392 >UniRef50_Q31HN4 Flagellar biosynthetic protein FlhB n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HN4_THICR Length = 381 Score = 442 bits (1138), Expect = e-123, Method: Composition-based stats. Identities = 154/384 (40%), Positives = 246/384 (64%), Gaps = 5/384 (1%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ + +K+E P+ +L +ARE+GQ+PRS+ELT+LL+ L ++F G + + Sbjct: 1 MAENEDGTEKSEEPSEKKLREAREKGQVPRSKELTTLLMTLGAAVFLYFFGAQMMQDFET 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + GL FD S D + ++ L+ ++ ++P + +VL+A++SP++LGG FS + Sbjct: 61 LFIKGLSFDRSHAYDFQMATNLVLGLVVHSIYMMVPFLLLMVLIAVVSPMLLGGWNFSTQ 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +L PK SKLNP+ GIK+MFS EL KA K LV V GFFLW+ + +++ + E P Sbjct: 121 ALAPKISKLNPVSGIKKMFSMNALMELFKAFAKFTLVSVVAGFFLWYSYEEIISIGIEPP 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ +A L+ + V L +I + DV FQI H+ +L+M++Q++++E KQ EG P Sbjct: 181 KQALAHAGQLIVEAFIFVSLSLILIAAIDVPFQIHQHVTQLKMTKQEVKEEHKQQEGSPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VKGRIRQ+QR +++RMM VP+ADV++ NPTH++VAL+Y ++M+ P V+A G+ +A Sbjct: 241 VKGRIRQLQREMSQKRMMQKVPEADVVITNPTHFAVALKYAPDEMAEPMVLALGSDFMAA 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +IR + E+N+P +EAPPLARALY +AE+ + IP +L+ AVA +LA+V+QL+ + Sbjct: 301 QIRTLAKEHNIPLIEAPPLARALYYNAEVDRPIPYELFRAVAAILAYVYQLRDGKR---T 357 Query: 359 RPVQPTHLPVPEALDFINEKPTHE 382 V +LP+PE + E Sbjct: 358 DRVDFENLPIPEEMKTDEVPSGSE 381 >UniRef50_Q2SBX1 Flagellar biosynthesis pathway, component FlhB n=7 Tax=Gammaproteobacteria RepID=Q2SBX1_HAHCH Length = 378 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 156/377 (41%), Positives = 241/377 (63%), Gaps = 2/377 (0%) Query: 1 MS--DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+ D S +KTE PTP ++EKAREEGQIPRSREL + +LL G + G ++ + L G Sbjct: 1 MAENDTSQEKTEEPTPRKIEKAREEGQIPRSRELNTTAVLLAGAVGLLVFGTTIGKALEG 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + A + D + + + + + ++L+P + +++ +L+ P+ LGG + S K Sbjct: 61 VFRASFTLTREEVFDAHQPMIHLGMAALDMAISLVPFMLVLLVASLLGPIALGGWMMSAK 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + PKFS++NPL G+KRMFS ++ EL K + KT++VG V L + P ++ + +E Sbjct: 121 AAAPKFSRINPLEGLKRMFSLKSLMELFKGVAKTLVVGGVALIILNYSIPDLLAMGSEDT 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + +M +A L+ L + +I + DV FQI+ + K LRM+ Q+I+DE+K +EG P Sbjct: 181 MVSMAHACSLLAWSFLFLASSMILIALVDVPFQIYDNQKNLRMTMQEIKDEYKDTEGKPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK R+R++Q +RRRM+ DVPKADV++ NPTHYSVAL+YD KM+AP V+AKGA +A+ Sbjct: 241 VKRRVREVQYEMSRRRMLQDVPKADVVITNPTHYSVALKYDAKKMAAPIVLAKGADHMAM 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +IREI + + + APPL R++Y H E+G++IP LY AVA+VLA+V+QL+R+R G+ Sbjct: 301 KIREIANAHKIELVSAPPLTRSIYHHTEVGEEIPSGLYLAVAQVLAYVFQLRRYRGGYGK 360 Query: 359 RPVQPTHLPVPEALDFI 375 +P +P L Sbjct: 361 KPQGTPDFTIPSHLRRD 377 >UniRef50_Q085L7 Flagellar biosynthetic protein FlhB n=70 Tax=Gammaproteobacteria RepID=Q085L7_SHEFN Length = 377 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 151/374 (40%), Positives = 233/374 (62%), Gaps = 1/374 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 SD ++TE PT RLE++RE+GQ+ RS+EL + +LL G ++A+ L ++ Sbjct: 4 SDSGQERTEDPTSKRLEQSREKGQVARSKELGTAAVLLAASVGFSMTGPAIAKSLYNIMK 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + I D N + ++ E L+ I+ + V+ + ++LGG+ FS K+ Sbjct: 64 QIFSMERDQIFDTNSMFRVWGVVGSELAGPLISFIALLAFVSFLGNIVLGGMSFSVKAFM 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK SKLNP+ G KRMF Q EL K I K +V F L ++ ++ L ++ Sbjct: 124 PKGSKLNPMNGFKRMFGTQALVELTKGIAKFSVVALSAYFLLKFYFYDILTLSSDHLPGN 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + +A+DL+ +L+ ++ +V DV FQI++H K+L+M++Q+++DE+K +EG P VKG Sbjct: 184 VYHALDLLIWMFILLCSSMLLIVIIDVPFQIWNHKKQLKMTKQEVKDEYKDTEGKPEVKG 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQMQ+ A+RRMM +VP ADVIV NP HY+VA++YD ++ SAP ++AKG VA RIR Sbjct: 244 RIRQMQQEMAQRRMMTEVPNADVIVVNPEHYAVAVKYDVSRSSAPFLIAKGVDDVAFRIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 EI E+NV + APPLARA+Y ++ QQ+P L+ AVA+VLA+V+QL++++ G+RP Sbjct: 304 EIAREHNVAIVSAPPLARAIYHTTKVDQQVPEGLFTAVAQVLAYVFQLRQYQKGKGRRPK 363 Query: 362 Q-PTHLPVPEALDF 374 P P+P+ L Sbjct: 364 PIPLKQPIPDDLKH 377 >UniRef50_C1D4I4 FlhB1 n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4I4_LARHH Length = 389 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 167/381 (43%), Positives = 254/381 (66%), Gaps = 2/381 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD ++TE TP R E+AREEGQ+PRSREL + + + GV+++ G L ++L + Sbjct: 1 MAEDSDLERTEEATPRRREQAREEGQVPRSRELATFTVTMTGVAMLVAYGGVLYQQLKEL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + L F + ++ + + + + ++++LP++ + ++AL++P ++GG S K+ Sbjct: 61 FARTLTFTRATLDAEDAAQLALRGGLTDGLVSILPILGVLFVLALVTPALIGGWNLSWKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++PKFSK+NPL GIKR+FS Q E KAILK++L+G V + +W+ +++ L S Sbjct: 121 VEPKFSKINPLSGIKRIFSVQGAIEGAKAILKSLLIGGVATWVIWNERAELVSLTRLSLD 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ A+DL L+V ++ +V DV FQ++ + K LRM+++D++ E K+SEG P V Sbjct: 181 QALARAVDLTLHTLLIVAGAMVLLVLIDVPFQLWQYSKNLRMTKEDVKKEMKESEGSPEV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ+QR AARRRMM+DVP A V++ NPTHY+VAL+Y+ + M+APKV+AKG+ VA R Sbjct: 241 KGRIRQLQREAARRRMMSDVPNASVVITNPTHYAVALRYE-DGMAAPKVIAKGSMKVAER 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I E+ EN V L APP ARALY ++EIG IP LY+A A+VLA+V+QL+ + GG Sbjct: 300 IIELARENRVTILRAPPFARALYFNSEIGDDIPAALYSAAAQVLAYVFQLRAYEKHGGIA 359 Query: 360 PVQPTHLPVPEALDFINEKPT 380 PV P LPVP LD + Sbjct: 360 PVYPDKLPVPPDLDPQTRQTP 380 >UniRef50_Q56886 Flagellar biosynthetic protein flhB n=153 Tax=cellular organisms RepID=FLHB_YEREN Length = 383 Score = 439 bits (1130), Expect = e-122, Method: Composition-based stats. Identities = 246/383 (64%), Positives = 316/383 (82%), Gaps = 1/383 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD DK+E PT H+LEKARE+GQIPRSRELTS+L+L G++++W G S+AR+L+ M Sbjct: 1 MAEDSDADKSEEPTAHKLEKAREKGQIPRSRELTSMLMLGAGLAILWVSGESMARQLAAM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 ++ GLHFDH +I+D +L QI +L+R+ ++ L+P+ +G+V+VA+ P++LGG++FSG+S Sbjct: 61 IAQGLHFDHGLISDDKQMLRQIGMLLRQTLIGLIPIFAGLVIVAMAVPMLLGGVLFSGES 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++ +++P+ G+KRMFS+Q AELLKAILK LVG VTG FLWH+WP MMRLMA P+ Sbjct: 121 IKFDLKRMSPIAGLKRMFSSQALAELLKAILKATLVGWVTGIFLWHNWPDMMRLMAAPPV 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+G+A+ L+ C L+VVLG+ PMVGFDVFFQI SH+KKLRM++Q+IRDEFK EGDPHV Sbjct: 181 AALGDALHLIIFCGLVVVLGLTPMVGFDVFFQITSHIKKLRMTKQEIRDEFKDQEGDPHV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ QRA ARRRMMADV KADVIV NPTHY+VALQY+E KMSAPKV+AKGAG VALR Sbjct: 241 KGRIRQQQRAMARRRMMADVHKADVIVTNPTHYAVALQYNETKMSAPKVLAKGAGAVALR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+GAE+ +P LEAPPLARAL+RH+E+GQ IP LYAAVAEVLAWV+QLKRW+ GG Sbjct: 301 IRELGAEHRIPLLEAPPLARALFRHSEVGQHIPATLYAAVAEVLAWVYQLKRWKREGGLI 360 Query: 360 PVQPTHLPVPEALDFINEKPTHE 382 P +P HLPVPE LDF E+ + Sbjct: 361 PKKPEHLPVPEGLDFATEESETD 383 >UniRef50_A6SZT0 FlhB flagellar biosynthetic protein n=14 Tax=Betaproteobacteria RepID=A6SZT0_JANMA Length = 402 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 180/381 (47%), Positives = 250/381 (65%), Gaps = 1/381 (0%) Query: 2 SDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 ++ESD +KTE +P +LE+ARE+G +PRSREL + +LL + W G + L+ ML Sbjct: 14 AEESDLEKTEPASPRKLEQAREQGDVPRSRELATCTLLLGAGAAFWILGGRMVGELNKML 73 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 +AGL FD + D L+L I + ++A P +++VALISP ++GG +FSGK+L Sbjct: 74 AAGLSFDREMAFDMELLLAHAAASIIDLLIAFAPAALILIVVALISPALIGGWLFSGKAL 133 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 QP F ++NP+ G+ M S++ EL KAI KTIL+G + + H + +M L E + Sbjct: 134 QPNFGRMNPIKGLGNMVSSRAAVELGKAIAKTILIGWIAWMVMRHEFDAVMALSVEPLKS 193 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + L+ + + G++ + D +Q++ H KKL MSRQD+R E K+SEG+P +K Sbjct: 194 GTEHLGHLLVFSFIFIAAGLVIVAAIDAPYQMWQHAKKLMMSRQDVRQESKESEGNPEIK 253 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +IRQ QR ARRRMMA+VP ADV+V NPTHY+VAL+Y EN M AP+VVAKGA VA +I Sbjct: 254 AKIRQQQREMARRRMMAEVPTADVVVTNPTHYAVALKYSENGMRAPRVVAKGADEVAAKI 313 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 RE+ ENNV LEAPPLARAL+RHAE+G +IP LY AVAEVLA+V+QL+ + GG RP Sbjct: 314 RELAMENNVVLLEAPPLARALFRHAELGDEIPEALYIAVAEVLAYVFQLRAYSKHGGARP 373 Query: 361 VQPTHLPVPEALDFINEKPTH 381 V+P L VP +D +N Sbjct: 374 VKPGDLEVPPEMDPLNPSAAD 394 >UniRef50_Q3JY73 Flagellar biosynthetic protein FlhB n=61 Tax=cellular organisms RepID=Q3JY73_BURP1 Length = 470 Score = 436 bits (1121), Expect = e-121, Method: Composition-based stats. Identities = 178/382 (46%), Positives = 250/382 (65%), Gaps = 1/382 (0%) Query: 2 SDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 +++SD D+TEA TP R EKAREEGQ+ RSREL S +L G W + L ML Sbjct: 71 AEDSDLDRTEAATPKRREKAREEGQVARSRELASFALLSAGFYGAWMLSGPIGEHLRTML 130 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 FD + D N +L L E + AL P+++ + AL +P+ +GG + S K+ Sbjct: 131 HTAFSFDRAAAFDTNRMLSHAGTLSLEGLYALAPVLALTGVAALAAPMAMGGWLVSTKTF 190 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + KF +LNP+ G+ R+FS Q +L +I KT++VG + G +W +++ L + Sbjct: 191 ELKFERLNPITGLGRIFSIQGPIQLGMSIAKTLVVGGIGGIAIWRSKDELLGLATQPLHA 250 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ +A+ LV +C + V G++ + G DV +Q++ + KKLRM++++I+ E +++EGDPHVK Sbjct: 251 ALADALHLVAVCCGMTVAGMLVVAGLDVPYQLWQYNKKLRMTKEEIKREHRENEGDPHVK 310 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GRIRQ QRA ARRRMMA+VP ADV+V NPTH++VAL+Y + +M APKVVAKG LVA RI Sbjct: 311 GRIRQQQRAMARRRMMANVPTADVVVTNPTHFAVALKYTDGEMRAPKVVAKGVNLVAARI 370 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 RE+ AE++VP LEAPPLARALY + E+ ++IPG LY+AVAEVLAWV+QLKR+R G P Sbjct: 371 RELAAEHHVPLLEAPPLARALYHNVELEREIPGTLYSAVAEVLAWVYQLKRFRAEAGIAP 430 Query: 361 VQPTHLPVPEALDFINEKPTHE 382 P L VP LD + Sbjct: 431 ETPVDLDVPAELDKGAHVAPQD 452 >UniRef50_A6W0V5 Flagellar biosynthetic protein FlhB n=2 Tax=Marinomonas RepID=A6W0V5_MARMS Length = 378 Score = 436 bits (1121), Expect = e-121, Method: Composition-based stats. Identities = 148/378 (39%), Positives = 244/378 (64%), Gaps = 3/378 (0%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ + +KTE+ + +L+ AR +G +PRS++L+S L+L+V + I+ G L R L+ Sbjct: 1 MAENEDGSEKTESASSKKLQDARNKGNLPRSKDLSSALLLIVAAATIYGTGTLLVRDLAV 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + + + D + ++ + + M +++ L++ + + ++ + LGGL FS + Sbjct: 61 LFDFNFLVERADVFDLSRMVFHLYESVVAMMDSMVLLMAVLAVAGIVGSIALGGLNFSWE 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L PK SK++P+ G+KRMFS Q+ EL K+I K LVG V+ + + P+ + L +S Sbjct: 121 PLTPKLSKMSPIAGLKRMFSVQSLVELFKSIAKVTLVGIVSVLVVNYFLPETLGLTFQSI 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ + +D+V + V L + + DV FQ++SH +KL+M++Q+++DE+KQ EGDP Sbjct: 181 ELAIAHGIDIVIWSFVFVTLALALIAAIDVPFQVWSHKEKLKMTKQEVKDEYKQQEGDPL 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 V+GRIRQMQR AA RMM+DVP ADVI+ NPTH+SVAL+YD+ +AP ++AKG +AL Sbjct: 241 VRGRIRQMQRQAAMNRMMSDVPSADVIITNPTHFSVALKYDQAGGAAPVLLAKGGDFIAL 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +IRE+G ++P +++P LARA+Y H EIG +IP L+ VA++LA+V+QL+ R+ G Sbjct: 301 KIREVGNHYDIPVIQSPALARAIYHHTEIGDEIPQGLFKVVAQLLAYVYQLRNARM-GAP 359 Query: 359 RPVQPTHLPVPEALDFIN 376 RP +L VP+ + Sbjct: 360 RPETMPNLDVPDEFQWDG 377 >UniRef50_B8FK32 Flagellar biosynthetic protein FlhB n=4 Tax=Bacteria RepID=B8FK32_DESAA Length = 358 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 134/357 (37%), Positives = 222/357 (62%), Gaps = 2/357 (0%) Query: 1 MSDE-SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D ++DKTE PTP + + AR++GQ+ +SR+L+S+++L+ G+ +++ G + ++ + Sbjct: 1 MADSPNEDKTEQPTPKKRDDARKKGQVAKSRDLSSVVVLMAGLGIMYMFGPYMHYHITSL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + D S I ++RE + L P+++GV +V S + G FS ++ Sbjct: 61 MENIFTTDVS-AWGVEEINTLGREMVREFLFILAPILAGVFVVGFASAAVQVGFYFSWEA 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 PKFSK+NP+ G RMFS Q EL K++ K +VG ++ + ++ L Sbjct: 120 AAPKFSKINPISGFGRMFSKQALVELAKSLAKLFIVGFISYLTIEAEMDNLILLGQVDAA 179 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + + ++ + V + ++ + D FQ + H ++L+M++Q+++DE+KQ++GDP V Sbjct: 180 NTLAYVLKIILKLFIRVGIIMVFVAVLDFAFQKWHHEQQLKMTKQEVKDEYKQTDGDPMV 239 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RIR++Q AARRRMM +VPKADV+V NPTH ++A++Y+ M AP +VAKGAG +A + Sbjct: 240 KARIRRIQMEAARRRMMEEVPKADVVVTNPTHLALAIKYNALTMGAPLIVAKGAGPIAQK 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 I+E+ EN+VP +E LARALY+ +IG ++P LY AVAEVLA+V+ LK+ R Sbjct: 300 IKEVARENDVPIVENKELARALYKVVDIGDEVPVALYEAVAEVLAYVYGLKQNRARS 356 >UniRef50_B9Z6P8 Flagellar biosynthetic protein FlhB n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6P8_9NEIS Length = 388 Score = 434 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 162/382 (42%), Positives = 254/382 (66%), Gaps = 2/382 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD ++TEA T RL++AREEG IPRSREL++ + + GV+++ G L + + Sbjct: 1 MAEDSDLERTEAATGRRLQQAREEGNIPRSRELSTFAVTMTGVALLMAMGERLGNFMLQL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + FDH ++ + +L + + + +L L+PL G+ LVA+ +P+++GG + K Sbjct: 61 MRRLFTFDHDMVQHTDPVLLRFKESLTDTLLQLMPLFGGLALVAVAAPLLVGGWNLTFKG 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++PK SKLNP GI+RMFS E LKAILK++++G V + +W+ +++ L+A Sbjct: 121 IEPKLSKLNPAHGIQRMFSLSALTEALKAILKSVVIGGVATWVIWNERAELIGLIAMPLE 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 TA+G M L LLVV ++ +V DV FQI+++ K+LRM++++++ E+K+ EG P V Sbjct: 181 TALGKMMQLTFHTFLLVVGAMLLLVVVDVPFQIWNYHKQLRMTKEEVKQEYKEQEGSPEV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ+QR AA+RRMM ++P A+VIV NPTHY+VAL+Y E M AP+V+AKG +A + Sbjct: 241 KGRIRQLQRQAAQRRMMQEIPSANVIVTNPTHYAVALKYTEG-MRAPQVIAKGRLKLAEK 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I + G E+ V + P ARALY H+E+G+++P +LY A A++LA+V+QLK + GG Sbjct: 300 IIDTGREHRVTVMRVPSFARALYFHSELGEEVPSRLYGAAAQILAYVYQLKLYEYNGGLA 359 Query: 360 PVQPTHLPVPEALDFINEKPTH 381 PV P H+ VP LD +++ Sbjct: 360 PVYPEHVEVPADLDPESKRQQD 381 >UniRef50_A5I580 Flagellar biosynthetic protein n=19 Tax=Bacteria RepID=A5I580_CLOBH Length = 609 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 125/349 (35%), Positives = 203/349 (58%), Gaps = 1/349 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S++KTE TP + AR++GQ+ +S+EL LL V+ G A L ++ L Sbjct: 262 SEEKTEEATPRKKMDARKKGQVAKSKELALAFTLLACTLVLVALGEYGANELKETMAGFL 321 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + ++ + N + IL + +LP+ ++ + + + G +F+ + L+P F Sbjct: 322 NNYLNMELNYNNLNSLAILTVLRVGKIVLPVALPIMCFGIAANYLQTGFLFTKEPLKPDF 381 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNP+ G KRMFS +T ELLK + +VG V FL ++ +++ L P + Sbjct: 382 KKLNPINGFKRMFSLRTVMELLKDLTIITVVGIVGYKFLQDNYLKILNLGTLRPWYMITG 441 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 + L + L ++ + D +Q + + K L+M++Q++++E+KQ EGDP +K +I+ Sbjct: 442 LLSLAISIFFRITLIMLFIAVADYVYQKYQYNKDLKMTKQEVKEEYKQDEGDPQIKSKIK 501 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q QR A +RMM +VPKA V+V NPTH +VAL+Y++ +APKVVAKGA VA++I++I Sbjct: 502 QKQREMAMQRMMQEVPKATVVVTNPTHIAVALRYEKG-DTAPKVVAKGADYVAIKIKDIA 560 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 N VP +E PLAR +Y EI ++P +Y AVAE+LA V+ LK+ + Sbjct: 561 KNNEVPVIENKPLARLIYEKVEIDSEVPQDMYEAVAEILAIVYTLKKKK 609 >UniRef50_Q0AYL8 Flagellar biosynthesis/type III secretory pathway protein n=3 Tax=Clostridia RepID=Q0AYL8_SYNWW Length = 369 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 132/352 (37%), Positives = 204/352 (57%), Gaps = 1/352 (0%) Query: 2 SDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 +D+ +KTE TP R E+AR++GQ+ +S +L S +IL+ G + + L Sbjct: 16 ADDGMGEKTEKATPRRREEARKKGQVFKSTDLNSAIILIAGSVASFMAFPYMVNNLKSFT 75 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + L + I ++ ++ + P+ +VAL+ + G VFSG+SL Sbjct: 76 TLYLLQRTQQDFSNDYIYFMLLEVLIIMGKMIFPIFLTTFIVALLITYLQVGFVFSGESL 135 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK +LNP+ G KR+FS + EL K++LK I+ G + + H+ R + I Sbjct: 136 TPKLERLNPVEGFKRIFSKRALVELGKSLLKVIVTGYIVYSVMRKHYILFPRFIDMELIA 195 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + +V A+ V L I + D FQ + H K L+MS+ +I+ E+KQ+EGDP +K Sbjct: 196 GLQVLSSIVFEMAMKVGLVFIIIGIADYIFQWYEHEKSLKMSKYEIKQEYKQTEGDPQLK 255 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R R++QR A +RMMA+VPKADV++ NPTH++V L+Y+ +KM AP VVA+G +AL+I Sbjct: 256 SRQRRIQRDIAMQRMMAEVPKADVVITNPTHFAVVLKYEASKMEAPVVVARGKDFMALKI 315 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 +EI + V +E P LAR LY + EIG +P +LY AVAEVLA+V++ K+ Sbjct: 316 KEIARMHGVVIVENPVLARTLYYNTEIGDLVPEELYQAVAEVLAFVYKQKKR 367 >UniRef50_D0I461 Flagellar biosynthesis protein FlhB n=2 Tax=Vibrionaceae RepID=D0I461_VIBHO Length = 375 Score = 430 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 138/374 (36%), Positives = 222/374 (59%), Gaps = 1/374 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MSD S DKTE P+ ++ KAREEG +PRSREL + L+++ ++ ++ + + Sbjct: 1 MSDSSAQDKTERPSEQKIRKAREEGNLPRSRELVTALMMVASALLLSAFSSAIHHTIVSV 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L+ D I P+ + + A AL PL + ++LV++ + ++ GG S K+ Sbjct: 61 SEMTLNIDKDTIFSPDKMGELLWQSAILATQALAPLFALIMLVSIGANLLRGGWNISTKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + PK SKLNPL GIKR+FSA + EL+K+ILK +G + + H+ +++ L Sbjct: 121 MMPKLSKLNPLSGIKRIFSANSLVELIKSILKVTFIGGALYWLINHYLNEIIALQHTRLS 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ +DL+ + L ++ + ++ + + ++KKL+M++Q++++E K +EG P + Sbjct: 181 AAIPAFLDLLWTGLFVYGLVLLFIAVLEMPYSSYEYIKKLKMTKQEVKEEHKNTEGRPEI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RIRQ+QR ++R VP ADVI+ NPTHY+VAL+YD +K +AP V+AKG AL+ Sbjct: 241 KARIRQLQRQMSQRAFAKTVPTADVIITNPTHYAVALKYDLSKANAPFVIAKGVDQAALQ 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IR+I ++ +P +E PPLARA+Y Q+IP QLY AVA VL +V+QL +++ Sbjct: 301 IRQIAQQHGLPVVEVPPLARAVYYSTNEWQEIPAQLYVAVAHVLNYVFQLDQYKKGRQSN 360 Query: 360 PVQPTHLPVPEALD 373 + VPE L Sbjct: 361 RPTFPTVVVPEELR 374 >UniRef50_B8CYQ0 Flagellar biosynthetic protein FlhB n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYQ0_HALOH Length = 356 Score = 430 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 116/352 (32%), Positives = 204/352 (57%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 ++S +KTE PTP RL KAR++GQ+ +S+EL+S L+ G V++F ++ L+ +S Sbjct: 4 NQSGEKTEKPTPRRLRKARQQGQVAKSQELSSAFTLMGGFLVLFFIIKNIIYSLTNRMSY 63 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 L + + L +I + P++ ++ L+ + G +F ++P Sbjct: 64 FLSLEAYNKINDVNSLYILIDSFYFIARLISPVLLASAIIGLVVNFLQVGPLFVPDLIKP 123 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 K+NP+ G KR+FS ++ EL+K++ K +V + L + W ++ L + A+ Sbjct: 124 DLKKINPISGFKRLFSLKSVVELIKSLFKIAIVAILAYLQLKNSWQTLINLSRQGITEAV 183 Query: 183 GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 L+ A+ +++ ++ + D +Q + +++ L+M++Q++++E K+ EGDP +K + Sbjct: 184 AYLGHLIFKVAITIIICLVVLGIADYIYQKWEYIRNLKMTKQEVKEEHKEIEGDPRIKSK 243 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 R+ QR RM+ + +ADV++ NPTH +VAL+YD N M AP VVAKG G +A +I+E Sbjct: 244 RREKQREMTLNRMIKAMEEADVVITNPTHIAVALKYDINSMEAPVVVAKGEGFIAKKIKE 303 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 E + +E PLARAL EIG++IP LY AVAEVLA++++ ++R Sbjct: 304 KARELKIEIVENKPLARALNATTEIGEEIPVDLYQAVAEVLAFLYKNNKYRP 355 >UniRef50_P35538 Flagellar biosynthetic protein flhB n=10 Tax=Bacillales RepID=FLHB_BACSU Length = 360 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 128/348 (36%), Positives = 211/348 (60%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +KTE TP + + R++GQ+ +S ++ + + LLV + G + RL + Sbjct: 11 AGEKTEKATPKKRKDTRKKGQVAKSSDVNTAVSLLVIFLSLIAIGPYMRDRLLSFIETFY 70 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 ++ + + + L+++ + L P++ ++ ++S M G +FS + +QPK Sbjct: 71 TESLTMKLSESNVHTLFVSLLKDMGMILAPILLVALVAGVVSNYMQVGFLFSAEVIQPKL 130 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KL+P+ G KR++S + EL+K+ILK ++VG LW H+ +++RL +P A+ Sbjct: 131 EKLDPIKGFKRIYSMRAIVELIKSILKIVVVGFAAFAVLWLHYGEILRLPLLTPEEALSF 190 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 L L ++ + G D +Q F + K ++MS+QDI+DE+K+SEGDP +K +I+ Sbjct: 191 VSKLTLWMGLSGAGALLILAGLDYLYQRFDYEKNIKMSKQDIKDEYKKSEGDPIIKSKIK 250 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q QR A RRMM +VPKADVI+ NPTHY++AL+YDE KM AP +VAKG +AL+IR+I Sbjct: 251 QRQREMAMRRMMQEVPKADVIITNPTHYAIALKYDEEKMDAPYIVAKGVDHLALKIRKIA 310 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 E++V +E PLARALY EI Q +P + + +AE+LA+V++ K+ Sbjct: 311 KEHDVMMVENRPLARALYDQVEIDQAVPEEFFKVLAEILAYVYKTKQK 358 >UniRef50_A1WUA6 Flagellar biosynthetic protein FlhB n=3 Tax=Gammaproteobacteria RepID=A1WUA6_HALHL Length = 391 Score = 429 bits (1105), Expect = e-119, Method: Composition-based stats. Identities = 155/381 (40%), Positives = 235/381 (61%), Gaps = 1/381 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S++ +KTE PTP R E++R++GQ+PRSRELT++L+LLV + G + +L+ +L Sbjct: 5 SEDGQEKTEDPTPKRREESRKKGQVPRSRELTTMLLLLVAAGALLALGPFMGNQLTALLE 64 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 D S I DP +++ ++ + +L +LP I+ ++ A+I+P LGG FS +Q Sbjct: 65 WSFTIDRSHIYDPGIVIERLHEALGRGLLTVLPFIAVMLAAAVIAPTALGGWSFSFHPMQ 124 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PK KL+P+ G +RMF + EL KA+ K +++G W + + Sbjct: 125 PKPEKLSPIKGFQRMFGTKAAVELGKALGKVLVIGGTAVGLFVLFWDNFYTMSRAPLEPS 184 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 M M L + L+ L ++ +V D+ +QI+ H +K+RM+RQ++++EFKQ+EG P VK Sbjct: 185 MAEGMRLFYIFFFLLALSMLVVVAIDIPYQIYDHTQKIRMTRQEVKEEFKQTEGKPEVKQ 244 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 R+R+ QR RRMM +VP ADV++ NP HY+VAL+YD++ M AP VVAKGA L+A RIR Sbjct: 245 RVREQQREMTNRRMMENVPDADVVITNPAHYAVALKYDQSTMRAPTVVAKGADLLAARIR 304 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 E+ EN++ +APPLARALY A++ Q+IPG LY AVA+VLA+V+Q + + G P Sbjct: 305 ELAEENDILIFQAPPLARALYHSADLDQEIPGALYFAVAQVLAYVYQFQAAQRRGWTPPQ 364 Query: 362 QPTHLPVPEALDFINEKPTHE 382 +P VP D E + E Sbjct: 365 RPE-PEVPSGYDTGGEASSDE 384 >UniRef50_Q2LT07 Flagellar biosynthesis pathway component n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LT07_SYNAS Length = 354 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 134/354 (37%), Positives = 204/354 (57%), Gaps = 2/354 (0%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ ++TE TP R E+ARE+GQ+ +SR+L S+ IL + +FG S +L Sbjct: 1 MAESNKDQERTEEATPKRREEAREQGQVAKSRDLASVAILSACLLYFYFGANSFLHQLMD 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 ++ + S + I + + + + P + V + AL S ++ G S K Sbjct: 61 LMKSSFSSLDSSLVTTENIQSLLFSAFYKTITLMTPFLLVVCIAALSSNILQVGFKISTK 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 ++ PK SK++P G R+FS Q+ E +K+I K + G V + ++ L S Sbjct: 121 AIAPKLSKIDPAKGFARLFSLQSLIEFIKSIFKISIAGFVAYLTVKSELVDILPLADSSV 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + L +I + D +Q + + + L+MSRQ+I+DE KQ+EGDP Sbjct: 181 WEILVYITGTSFRILLTTCWVLIILALMDYLYQRWEYERNLKMSRQEIKDENKQTEGDPI 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK RIR++QR A+RRMMA+VPKADVI+ NPTH +VALQYD++ M APKV+AKGAG +A Sbjct: 241 VKARIRRLQREMAQRRMMANVPKADVIITNPTHLAVALQYDQDSMIAPKVIAKGAGYLAE 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 +I+EI E+ VP +E PLA+ LY+ E+ IP LY AVAE+LA+++ +KR Sbjct: 301 KIKEIARESRVPLVENKPLAQVLYKMVEVSGTIPDSLYKAVAEILAYIYSIKRE 354 >UniRef50_C0ZF82 Flagellar biosynthetic protein FlhB n=4 Tax=Paenibacillaceae RepID=C0ZF82_BREBN Length = 365 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 130/348 (37%), Positives = 210/348 (60%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +KTE TP + + AR++GQ+ +S++L+ L L ++ G ++ ++ L Sbjct: 16 NGEKTEKATPKKKQDARKKGQVAKSQDLSPALSLTAFFFLLMMLGSTMLGTFQDLMRESL 75 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + + + ++ L+ EA+ + P++ LVA M G FS + LQ K Sbjct: 76 ITYTTWQLNEENLKVMVMQLVFEAIKIVGPILGLSFLVAFAVNYMQVGWHFSTEPLQMKL 135 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 K++P+ G KR+FS ++ ELLK++LK V LW+ Q+++L S + Sbjct: 136 EKIDPIKGAKRIFSLRSLVELLKSLLKISAGIYVAYVILWNAKEQVVQLSLLSLGAVLSF 195 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 + V + + L + + D +Q + H K LRMS+QD++DE KQ+EGDP +KG+IR Sbjct: 196 TAEEVTKLGIYLGLLLFILAVLDYAYQRYEHEKNLRMSKQDLKDEHKQAEGDPLIKGKIR 255 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + QR+ A RRMM ++PKADVI+ NPTH++VA++YD + MSAP V+AKG +AL+IRE+ Sbjct: 256 ERQRSMAIRRMMQELPKADVIITNPTHFAVAVRYDASAMSAPTVIAKGQDYLALKIREVA 315 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 ++ + T+E PLARALY E+GQQIP +++ AVAEVLA+V++L+ Sbjct: 316 KKHRIVTMENKPLARALYSQVEVGQQIPEEMFKAVAEVLAYVYKLQGK 363 >UniRef50_Q1NP88 Flagellar biosynthetic protein FlhB n=2 Tax=Deltaproteobacteria RepID=Q1NP88_9DELT Length = 356 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 142/356 (39%), Positives = 215/356 (60%), Gaps = 2/356 (0%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++E +KTE PT RL +AR +G + +S E+ S +LL GV V++F G + R++G Sbjct: 1 MAEEQSGQEKTEKPTERRLLEARNKGDVAKSMEVPSAAVLLAGVIVLYFTGEYMFNRVTG 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 M+ L H I + ++ L PL+ V L AL + + G +F+ + Sbjct: 61 MMQFYLSNLHDIEISAASMPNITRQVMLLIYTVLWPLMLTVFLAALAANYLQVGFLFTAE 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + PK K++PL G+ R+FS QT K+I K LVG + + P+++ L ++P Sbjct: 121 KITPKLEKIDPLKGLGRLFSKQTLNNAFKSIAKFSLVGYIAYSEIIRAMPEILPLADKAP 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + ++ L + I + D FQ + ++K++M++QD++DE KQSEGDPH Sbjct: 181 YPILVFMVETAFWIFLKCAVLFILIALIDYAFQRWQFMEKMKMTKQDMKDESKQSEGDPH 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VKGRIR +Q A++RMMA+VPKADV+V NPTH +VA++YD M AP+V+AKGAG+VA Sbjct: 241 VKGRIRSIQMEMAKKRMMAEVPKADVVVTNPTHLAVAIKYDALTMKAPEVLAKGAGVVAN 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 +I+E+ E+ VP +E PLA+ALY++ EIG IP L+ AVAEVLA+V+ LK Sbjct: 301 KIKEVAREHQVPVVEDKPLAQALYQNVEIGGSIPENLFQAVAEVLAYVYNLKGNTP 356 >UniRef50_A1HN21 Flagellar biosynthetic protein FlhB n=2 Tax=Veillonellaceae RepID=A1HN21_9FIRM Length = 376 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 121/348 (34%), Positives = 202/348 (58%), Gaps = 1/348 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +KTE TP R E+AR++GQ+ +S EL S L LL I G + +L+ + Sbjct: 28 NQEKTEEATPKRREEARKKGQVAKSVELGSALCLLAAFFTIKLTGTYIYEQLASYMQFLF 87 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + L + +LP++ ++ V+L+ M G FS + L+P+ Sbjct: 88 SRFTKEDMTIASSYRFFLDLALIFLKIVLPIMLVILAVSLLVNFMQVGFTFSVEPLKPQL 147 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 S++NPL G++R+FS ++ EL+K++ K ++ F+ + L + ++ Sbjct: 148 SRINPLAGMQRLFSKRSLVELVKSLFKVAIISYFIYQFIIEETLNIALLSRLALRDSLAV 207 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 L A + + ++ + D ++Q + H + L+M++Q++++EFKQ+EG+P +K +I+ Sbjct: 208 IAALTFDLAFRIGVVILVLAILDYYYQWWEHNQNLKMTKQEVKEEFKQTEGNPQIKSKIK 267 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + QRA A RRMM +VPKADV+V NPTH+++AL Y+ M+AP V+AKG +A RI+ + Sbjct: 268 ERQRALAMRRMMQEVPKADVVVTNPTHFAIALLYE-KTMTAPMVIAKGQDFMAERIKLVA 326 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 EN V +E LARALY EIG+ +P +LY AVAEVLA+V++LK+ Sbjct: 327 KENGVAIVENKALARALYDTVEIGETVPPELYKAVAEVLAYVYRLKKR 374 >UniRef50_A0L3J7 Flagellar biosynthetic protein FlhB n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L3J7_MAGSM Length = 355 Score = 426 bits (1096), Expect = e-118, Method: Composition-based stats. Identities = 147/354 (41%), Positives = 213/354 (60%), Gaps = 1/354 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+DE D KTE PT RL +R +GQ+ S+E+ + L++L ++V G L + L Sbjct: 1 MADEDKDSKTEEPTSKRLSDSRNKGQVVSSKEVPTALLMLAALAVFLVQGNELWQALQRK 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + L S P + +IR ++ L P + ++VA+IS ++ G + + + Sbjct: 61 MHFFLSGQISDDITPTGVSLIFNEIIRAVVMDLAPFFALFLVVAIISGLIQHGWLITFEP 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L PKFSK+NPL G+KR+FS ++ E K+I+K ++ + ++ Q++ L + Sbjct: 121 LMPKFSKVNPLQGLKRLFSVRSLVEAFKSIVKIFVISFAVYLAMRNNIDQILGLADTTIT 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 V L + + D +Q F ++K LRMS+Q+I+DE KQ EGDP + Sbjct: 181 EFTTLMFKDSLEILWRVTLAFLLIAVLDFIYQKFDYIKGLRMSKQEIKDEMKQMEGDPLL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIRQ+QR A+ RMM +VPKADVI+ NPTHY+ ALQY +MSAPK+VAKG GL+A R Sbjct: 241 KGRIRQIQRELAQSRMMQEVPKADVIITNPTHYACALQYTPGQMSAPKLVAKGKGLIAAR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 IRE+ ENN+P +E PPLAR LYR E+ Q IP +L+ AVAEVLA+V+ LK R Sbjct: 301 IRELADENNIPRVENPPLARTLYRDVELEQFIPPELFKAVAEVLAYVFSLKNRR 354 >UniRef50_C3K0I5 Putative flagellar biosynthesis-related protein (Flagellar biosynthetic protein flhb) n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K0I5_PSEFS Length = 378 Score = 426 bits (1096), Expect = e-118, Method: Composition-based stats. Identities = 150/375 (40%), Positives = 235/375 (62%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S+ DKTE PT R + +RE+G+I RS+EL ++ ++ G + G LA L ++ Sbjct: 4 SESGQDKTEDPTEKRKKDSREKGEIARSKELNTVATMMAGSGALLIYGGGLALDLMELMK 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 ++ +P+ + ++ + A+LA+ P++ ++L ALI PV LGG +F+ S+ Sbjct: 64 HNFALPREVLLNPDAMGQYLLHSGKIAILAVQPILITLLLAALIGPVALGGWLFAAGSMA 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PKFS++NP G+KRMFSA+ ELLKA+ K IL+ V L ++R+ E +A Sbjct: 124 PKFSRMNPGAGLKRMFSAKALVELLKALAKFILILFVALMVLSSDIDDLLRIAHEPLESA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + +++ +VG AL + G+I + D Q++ KKL M++Q++RDE K EG P VK Sbjct: 184 IIHSVQVVGWSALWMAAGLIIIAAVDAPIQLWESHKKLLMTKQEVRDEHKDQEGRPEVKQ 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQ+QR ++R+MMA VP ADVI+ NPTHY+VAL+YD K AP ++AKG+ AL+IR Sbjct: 244 RIRQLQREMSQRKMMASVPDADVIITNPTHYAVALKYDPEKGGAPMLLAKGSDFTALKIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 EI +++ LE+P LAR+++ ++ Q+IP LY AVA+VLA+V+Q++++R G+RP Sbjct: 304 EIAVAHDILLLESPELARSIFYSTDLDQEIPAGLYLAVAQVLAYVYQIRQYRSGKGKRPD 363 Query: 362 QPTHLPVPEALDFIN 376 LP+P L + Sbjct: 364 PLKDLPIPPELRRDS 378 >UniRef50_Q3J977 Flagellar biosynthetic protein FlhB n=3 Tax=Gammaproteobacteria RepID=Q3J977_NITOC Length = 377 Score = 426 bits (1095), Expect = e-118, Method: Composition-based stats. Identities = 154/377 (40%), Positives = 242/377 (64%), Gaps = 2/377 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D S ++TE PTP R E+AR++GQ+PRSREL++ ++LL + G L + L+ + Sbjct: 1 MADSSAQERTEQPTPKRQEEARKKGQVPRSRELSTTVLLLSSALGLVLIGEPLLQGLADL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + GL + + I +P + Q + EA+ + P ++ ++ AL +P+++GG FS +S Sbjct: 61 MRQGLQLERAQIFEPKAAILQFQQGVGEAVKIITPFLALTLIAALAAPLLMGGWSFSAQS 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L K+ KLNP G+KR+F Q G ELLKA++K +L+ V W P ++ L + + Sbjct: 121 LGFKWEKLNPAKGMKRIFGPQGGMELLKALIKFLLLSGVGCLLFWLFSPDLIALGRQPFV 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ L+G + + + + D FQ ++H ++L+M+RQ++++E K+++G+P + Sbjct: 181 PAVFQLAHLMGWSLVGLSASLALIAVIDAPFQGWNHTRQLKMTRQEVKEEHKETDGNPEL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR++QR A RRMMA VP+ADV+V NPTHY+VAL Y+++K AP+VVAKG VA++ Sbjct: 241 KGRIRRVQREIASRRMMAAVPQADVVVVNPTHYAVALNYEQDKQGAPRVVAKGVDQVAIK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IR + A NNVP L AP L+RA+Y ++ Q+IP LY AVA+VLA+V QL++++ GG R Sbjct: 301 IRTVAAGNNVPVLSAPALSRAIYHSTKLDQEIPAGLYRAVAQVLAYVLQLRQYQRRGGPR 360 Query: 360 PVQ-PTHLPVPEALDFI 375 P P P+PE L Sbjct: 361 PQPIPNEFPIPEDLRRD 377 >UniRef50_B9ZRA6 Flagellar biosynthetic protein FlhB n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRA6_9GAMM Length = 383 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 148/374 (39%), Positives = 232/374 (62%), Gaps = 6/374 (1%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ +KTE PTP RL +A+E+GQ+PRSREL++ L+L+ + F G +L +L+ Sbjct: 1 MAENESGQEKTEQPTPKRLREAKEKGQVPRSRELSTFLVLMAAGGFMTFFGPTLGGQLAE 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + + D +L+L + I + LLPL +++ A+++P+++GG FS + Sbjct: 61 QTAGRFDIERDLAYDSSLLLPYLSEQIFMTLRTLLPLFGVLMVAAVLAPILIGGANFSWQ 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + +PK SKLNPL G+KR+FS Q E K K +LV V LW +++ L E Sbjct: 121 AAKPKASKLNPLKGLKRIFSWQGLMEFGKTFAKFVLVAGVAMSVLWTFSDRLLMLGYEPL 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ +A L + V +I + D FQ+++H K+LRM+RQ+++DE+K+++G P Sbjct: 181 EQAITHAAQLALGTFVAVSAALILVAAIDAPFQMWNHQKQLRMTRQELKDEYKETDGKPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK +IRQ+Q+ A+RRMM +VPKADV++ NPTHY+VA+ Y+ ++M+APK+VAKG VA Sbjct: 241 VKQKIRQLQQEMAQRRMMEEVPKADVVITNPTHYAVAITYEASRMAAPKLVAKGVDEVAA 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 IR + E+ + +EAP +ARA+Y ++ Q+IP L+ AVA +LA+V+QLKR Sbjct: 301 SIRAVADEHKIIRVEAPRVARAIYFTTDLNQEIPNGLFVAVARILAYVYQLKR----SDA 356 Query: 359 RPVQPTHLPVPEAL 372 P LPVPE Sbjct: 357 DVAMPDDLPVPEDY 370 >UniRef50_B1HQX6 Flagellar biosynthetic protein n=17 Tax=Bacillaceae RepID=B1HQX6_LYSSC Length = 362 Score = 424 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 126/349 (36%), Positives = 215/349 (61%), Gaps = 1/349 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE TP + + AR++GQ+ +S+++TS +++L+ ++F SL L Sbjct: 13 SGEKTEKATPKKRQDARKKGQVVKSQDVTSAIVMLMVFIFLFFFAGSLRDELLAFFRQTF 72 Query: 65 HFDHSII-NDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 + I + ++ I + + ++P+++ V+ AL + G +F+ + ++ Sbjct: 73 IHNIRIETLTIDSVMHLFIDTLIQMAFIIVPIMAIAVVGALAGNFLQFGFLFTLEPMKFD 132 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG 183 K++P+ G+KR+FS + ELLK++LK +GSVT +W + P+++ L +SP + Sbjct: 133 LKKMDPIKGLKRIFSVKAIVELLKSVLKIGFIGSVTTIIIWTNLPEVLALSFKSPWITLI 192 Query: 184 NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRI 243 LVG+ + L ++ + D +Q F + K L+MS+QDI+DE+K SEGDP +K +I Sbjct: 193 TVGKLVGIMGIAASLVLLCVSILDWLYQKFDYEKNLKMSKQDIKDEYKNSEGDPLIKSKI 252 Query: 244 RQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREI 303 +Q QR A RRMM+++P ADV++ NPTHY++AL+YDE M AP+V+AKG +A +I+ I Sbjct: 253 KQRQREMAMRRMMSEIPSADVVITNPTHYAIALKYDEESMDAPRVIAKGTDFIAQKIKLI 312 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 E++V +E PLARA+Y EIG +P + + AVAE+LA+V+++KR Sbjct: 313 AKEHDVIMVENRPLARAMYDQVEIGDPVPEEFFKAVAEILAYVYRIKRK 361 >UniRef50_Q2Y9F9 Flagellar biosynthetic protein FlhB n=2 Tax=Betaproteobacteria RepID=Q2Y9F9_NITMU Length = 392 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 169/382 (44%), Positives = 255/382 (66%), Gaps = 5/382 (1%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS+ESD ++TE +P RLEK+REEGQ PRS EL++ +L+ + +W G L+ +L+ + Sbjct: 1 MSEESDQERTEPASPRRLEKSREEGQAPRSTELSTFALLIAAGTGLWLMGGHLSSQLARL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + G+H +P + ++ A++ P + ++LVAL++P++L G +FS KS Sbjct: 61 MKEGMHIPRETGFEPARLAERLFDQSFHALITFAPFLILMILVALVAPMLLSGWLFSWKS 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P F ++NPL G+ RMFS + EL KA+LK L+G + +WH+ ++ L+A + Sbjct: 121 LNPDFKRINPLSGLSRMFSLHSLLELAKALLKAALIGGAGVWTIWHYKESVLSLIARPLV 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + + +LV L + +I + DV F+++ H +KLRM+++++R E K++EG+P + Sbjct: 181 PGLTHMGELVALSFFSIAGTMILIATVDVPFKLWDHYRKLRMTKEEVRQENKETEGNPQI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR QR AR+RMM ++P+ADVI+ NPTHYSVAL+Y++ KM AP+VVAKG L+AL+ Sbjct: 241 KGRIRAQQREMARKRMMTEIPRADVIITNPTHYSVALRYEDGKMRAPRVVAKGMHLLALK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL---AG 356 IREIG ++ VP LEAPPLARALY+H E+G +IP LY VAEVLA+V+QL+R + +G Sbjct: 301 IREIGHQHKVPVLEAPPLARALYQHTELGDEIPQTLYNVVAEVLAYVYQLRRHQQYGPSG 360 Query: 357 GQRPVQPTHLPVPEALDFINEK 378 G+ PV P L VP LD N+ Sbjct: 361 GKAPVLPE-LDVPVELDPENKA 381 >UniRef50_B8EA03 Flagellar biosynthetic protein FlhB n=22 Tax=Gammaproteobacteria RepID=B8EA03_SHEB2 Length = 376 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 146/364 (40%), Positives = 230/364 (63%), Gaps = 1/364 (0%) Query: 12 PTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSII 71 PT RLE+ARE+GQI RS+EL + +L+ + G SLA L+ + D + I Sbjct: 13 PTGRRLEQAREKGQIARSKELGTAAVLISAACGFYMLGPSLATSLTRVFETVFTMDRAQI 72 Query: 72 NDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLP 131 D + ++ E + ++ +V+VA I V LGG+ FS +++ PK SK++P Sbjct: 73 FDTEEMFNVWGVVASEIAWPMAKIMLLIVVVAFIGNVALGGMNFSTQAMMPKASKMSPAA 132 Query: 132 GIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGL 191 G+KRMF Q EL K I K +V L ++ +M L ++ + +A+DL+ Sbjct: 133 GLKRMFGVQALVELTKGIAKFSVVAFSAYLLLSFYFNDIMLLSSDHLPGNVYHALDLLVW 192 Query: 192 CALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAA 251 +L+ ++ +V DV FQI++H K+L+M++Q+++DE+K +EG P VKGR+RQMQR A Sbjct: 193 MFILLCSSILLIVVIDVPFQIWNHNKQLKMTKQEVKDEYKDTEGKPEVKGRVRQMQRELA 252 Query: 252 RRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPT 311 +RRMMA+VP ADVIV NP H++VA++YD + +AP V+AKG VA +IREI E+N+ Sbjct: 253 QRRMMAEVPNADVIVVNPEHFAVAIKYDVQRSAAPFVIAKGVDDVAFKIREIAREHNIAI 312 Query: 312 LEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQ-PTHLPVPE 370 + APPLARA+Y ++ QQIP L+ AVA++LA+V+QL++++ G++P+ P + P+P+ Sbjct: 313 VSAPPLARAIYHTTKLDQQIPEGLFTAVAQILAYVFQLRQYQKGRGRKPIPVPLNQPIPD 372 Query: 371 ALDF 374 L + Sbjct: 373 ELKY 376 >UniRef50_UPI0001BCCDC9 flagellar biosynthesis/type III secretory pathway protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCCDC9 Length = 369 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 131/352 (37%), Positives = 201/352 (57%), Gaps = 2/352 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +KTE PT + AR++GQ+ RS+EL + +LLVG + S+ ++ + Sbjct: 20 GGEKTEEPTAKKRADARKKGQVGRSQELNTAFVLLVGFFSLKLLWDSIYLSIATYTTYVF 79 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + + D I+ I +I P++ ++++ L GL FS +S++ K Sbjct: 80 SNLNQTV-DTENIIRIFIGIIIVLAKTAFPIMLFIMVIGLAINFFQVGLNFSAESIEFKL 138 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNP+ G R+FS + EL K+ K I++G F+ M + M T++ Sbjct: 139 DKLNPINGFGRIFSKRALVELAKSFFKIIVIGFFLYRFIHEQILAMPQFMFFDLTTSLAL 198 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +++ A +V+ ++ M D +Q + + L+M++Q+++DE KQ+EGDP +KG+IR Sbjct: 199 VAEIIFQMAFIVIGVIMIMAFCDYGYQRWQTTQDLKMTKQEVKDEMKQTEGDPQIKGKIR 258 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q QR A RMM +VPKADVI+ NPTHY+VAL Y++ M AP VVAKG LVA RI+EIG Sbjct: 259 QKQRQMAMARMMKEVPKADVIITNPTHYAVALSYEQG-MVAPTVVAKGQDLVAQRIKEIG 317 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 + VP +E PLAR LY ++G +P +LY AVAEVLA+V++LK R Sbjct: 318 RDARVPIIENKPLARTLYAAVQVGDAVPHELYQAVAEVLAYVYRLKHARRGA 369 >UniRef50_B2A365 Flagellar biosynthetic protein FlhB n=3 Tax=Bacteria RepID=B2A365_NATTJ Length = 363 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 119/347 (34%), Positives = 203/347 (58%), Gaps = 1/347 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +KTE PTP ++R++GQ+ +S ELTS L+L+ S ++ R Sbjct: 13 NQEKTETPTPKHRRESRKKGQVAKSTELTSALLLMATFSTLYIVFPYSFDRFMNFAKQFW 72 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 ++I + I +I ++ E + P+I VL+ LIS +M G++ +G L+PK Sbjct: 73 SNINTINYTMDEIHSLLITMMMEGAVFAAPVIIVAVLIGLISNLMQVGILLTGDPLKPKL 132 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 +L+P+ G +++FS + EL K++ K +++G + +H + + Sbjct: 133 ERLDPIKGFQKIFSKRAVVELTKSLFKMVVIGIIAYILFNNHMEHFPYFYDMTVMQIAVE 192 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 L V + ++ + D +Q++ H + L+M++Q ++DE KQ+EGDP V+ +++ Sbjct: 193 VGQLTWALIFRVGMALLFLSILDYVYQVWEHEQNLKMTKQQVKDEHKQTEGDPQVRSKMK 252 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + QR +++RMM++VP+ADV++ NP H +VAL+YDE +AP V+AKG G VA +I+EI Sbjct: 253 EKQREISKKRMMSEVPEADVVITNPVHIAVALKYDEG-DTAPMVLAKGQGHVARKIKEIA 311 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 ++NV +E LAR+LY EIG IP +LY AVAEVLA+V++LK+ Sbjct: 312 EDHNVVVMENRQLARSLYFSVEIGDFIPEELYQAVAEVLAFVYRLKK 358 >UniRef50_C9LSQ5 Flagellar biosynthetic protein FlhB n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LSQ5_9FIRM Length = 366 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 127/349 (36%), Positives = 201/349 (57%), Gaps = 2/349 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +KTE PT R AR++GQ+ RS+EL+ +LL G V+ G ++ + Sbjct: 18 AGEKTEEPTAKRRNDARQKGQVARSQELSGAFVLLAGFFVMRALGSTILTEIETYTVHIY 77 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + + D ++ II + P++ ++++ L G +F+ + L K Sbjct: 78 ANMNQTV-DAETVMRLIIDGMIVLAKTAFPVMIAILVMGLAINFYQVGFMFTTEPLSFKL 136 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNP+ G R+FS ++ ELLK++LK ++G+ +L M + ++M Sbjct: 137 DKLNPITGFGRIFSKRSIVELLKSLLKIAIIGAFLYVYLSGEIMHMPEFIYLDLKSSMAR 196 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 D++ +++ M D +Q + + L+MS+QDI++EFKQ+EGDP +KG+IR Sbjct: 197 MGDIIFSLVFQIIIVYFVMAAADFAYQKWQTTQDLKMSKQDIKEEFKQTEGDPQIKGKIR 256 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q Q+ A RMM +VP+ADVIV NPTHY+VAL+Y M AP+VVAKG LVA +I++I Sbjct: 257 QKQQQMAMNRMMKEVPEADVIVTNPTHYAVALKYKAG-MKAPEVVAKGQDLVAQKIKDIA 315 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 E+ V +E PLARALY ++G +P +LY AVAEVLA+V++LK+ + Sbjct: 316 REHRVTIVENKPLARALYAAVDVGGIVPPELYQAVAEVLAYVYRLKKKK 364 >UniRef50_A4J750 Flagellar biosynthetic protein FlhB n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J750_DESRM Length = 354 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 116/352 (32%), Positives = 199/352 (56%), Gaps = 1/352 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M + S +KTE TP RL++AR +GQ+P+S +L ++LL+ +L + Sbjct: 1 MPEGSQEKTEQATPRRLQEARRKGQVPKSADLNGAILLLITGLFALLYKDNLITHMQTYF 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + + ++ +I + + PL +++VAL + G +F+ +++ Sbjct: 61 FTYFNNFVKQQQQDSYLVQILIDFMINVFVVFTPLFILLMVVALGVNLAQVGFLFAPEAI 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PK KLNP+ G+K MFS + EL+K++LK +VG V + ++ + P T Sbjct: 121 KPKLDKLNPINGLKNMFSGRAMFELVKSLLKITIVGWVVYAAVRGEMANLLAIFHSPPRT 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + L + + + D+ +Q ++ K++RMS+Q++++E+KQ+EGDP +K Sbjct: 181 LLNQVLTIALKVILWGAVVYLGIALLDLLYQRYAFQKQMRMSKQEVKEEYKQTEGDPQIK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G +R+ QR +VP+A V+V NPTHY+VAL+Y++ M AP VVAKG +A +I Sbjct: 241 GWLRRRQRQLLANLARKEVPQATVVVTNPTHYAVALKYEQ-PMDAPVVVAKGTDHMARQI 299 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 REI +N VP +E +AR LY + EIG IP +++ AVAE+LA V+++K Sbjct: 300 REIARKNEVPVIENVEVARFLYANVEIGHAIPMEMFQAVAEILAMVYRMKNK 351 >UniRef50_B2UHW8 Flagellar biosynthetic protein FlhB n=6 Tax=Ralstonia RepID=B2UHW8_RALPJ Length = 387 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 169/383 (44%), Positives = 236/383 (61%), Gaps = 2/383 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS+ESD +KTE +P RLE+AREEG +PRSREL S + V +W G S+ R S Sbjct: 1 MSEESDLEKTEPASPRRLEQAREEGDVPRSRELASFALTAVSAGGLWVMGDSIVRAASSF 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L+ L F + + L L+ +V+ A +SP+ L S K Sbjct: 61 LARCLEFHRYNYTSGQDQWNYVTGQFMPLAMTLGGLMLMLVIAA-LSPLALTRGAISFKP 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P S+L L G+ RMFS + EL + ++K L+ V + ++ ++ L + Sbjct: 120 LSPDISRLFKLQGLTRMFSLEGLMELPRLLIKLFLIAGVGWLLVRYYRGDLIELPQQDLG 179 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 AM + + + G+ L + ++ + DV ++ + +K RM+++++R E ++SEGDPHV Sbjct: 180 VAMRDTLHVAGVAFLCMAAVMMLVAAVDVPLSLWQYARKHRMTKEEVRKEHRESEGDPHV 239 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR +QR AA+RRMMADVPKADVIV NPTHY+VAL+Y E + AP+V+AKGA +VA + Sbjct: 240 KGRIRNLQRQAAQRRMMADVPKADVIVTNPTHYAVALRYSEKEGGAPRVLAKGADMVAAK 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+G E+ +P LEAPPLARALYRH EIG QIP LYAAVAEVLA+V+QL+R GG+ Sbjct: 300 IRELGTEHKIPILEAPPLARALYRHTEIGHQIPEALYAAVAEVLAYVYQLRRLHQVGGRV 359 Query: 360 PVQPTHLPVPEALDFINEKPTHE 382 PV+PT LPVP LD + + Sbjct: 360 PVRPTDLPVPAELDPGPQPGPDD 382 >UniRef50_C4ZAM8 Flagellar biosynthesis/type III secretory pathway protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZAM8_EUBR3 Length = 382 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 196/351 (55%), Gaps = 6/351 (1%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 E +KTE T +L+ AREEG++ +S+ELT+ L+V V+ + L G+ S Sbjct: 29 EGGEKTEPATEKKLKDAREEGKVAKSKELTAAFDLIVLFLVLKIFISFVGGNLIGLFSTV 88 Query: 64 ------LHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 + + + +I + +L +LP + V++ ++ ++ G S Sbjct: 89 YKKMPDFLKESQEQISSVSVTHYLNNVILQFLLTVLPFFAFGVVITILVSIIQVGFKIST 148 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 K + PK SK NP+ G KR+ S + ELLK++LK ++ V + H + L Sbjct: 149 KPMAPKLSKFNPINGFKRILSKDSIFELLKSVLKVGIIMYVAYSSVKSHQNDIFILYELP 208 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 A+ D++ L + + + + D + ++M++Q+++DEFK +EGDP Sbjct: 209 LKQAIVLIGDIIINTGLKISIVYMIVGIADFAYNKHKFNNDMKMTKQEVKDEFKNTEGDP 268 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +KG+ R+ + A++RRMM DVPKADV++ NPTH++VA++YD K AP VVAKG VA Sbjct: 269 AIKGQQRKRMQEASQRRMMQDVPKADVVITNPTHFAVAVKYDAQKNDAPVVVAKGQDYVA 328 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 +I+EI +NN+ +E PLAR L+ + ++G +IP +LY +VAE+LA +++ Sbjct: 329 QKIKEIARDNNIHIVENKPLARMLFHNVDLGAEIPPELYRSVAEILAMIYK 379 >UniRef50_A6GUU4 Flagellar biosynthetic protein FlhB n=1 Tax=Limnobacter sp. MED105 RepID=A6GUU4_9BURK Length = 376 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 158/376 (42%), Positives = 237/376 (63%), Gaps = 4/376 (1%) Query: 1 MSDE-SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M++E +K + ++ KAREEG +PRSREL ++LL GV +++ G L + + Sbjct: 1 MAEETDQEKDLPASEQKIRKAREEGNLPRSRELGGGVVLLAGVGLLYTMGGELVSQSEKL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + GL D + D + + + +++E++ L+PL VV+ A++S + +GG +S K Sbjct: 61 MRQGLVLDRAQAFDTKHMGLKWVSMLQESLFILIPLFLVVVVAAIVSNIAVGGFNWSTKP 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+PK SKLNP+ G+K +FS AEL+KAILKT+++G V L + +L A Sbjct: 121 LEPKLSKLNPVKGLKNIFSVNGLAELVKAILKTVVLGGVGYLLLMQDLGEFTQLSAMPLE 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 M + AL++ + + +V DV +Q++ + K LRM+ ++++ E K+S+GDPH+ Sbjct: 181 HGMAETARITIKDALILAIAFLLIVSIDVPYQLWRYYKGLRMNLEELKRESKESDGDPHL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KG+I+ MQR AARRRMMA VP ADVIV NPTHYSVAL+YD++ AP+VVAKG G +AL+ Sbjct: 241 KGKIKSMQREAARRRMMASVPNADVIVTNPTHYSVALKYDKDGKGAPRVVAKGIGPLALK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+ EN VP +EAPPLARALY + E+ Q+IPG LY AVA++LA+V+ L G Sbjct: 301 IREVAQENKVPLVEAPPLARALYSNVELEQEIPGALYTAVAKLLAYVYAL---AEGKGHM 357 Query: 360 PVQPTHLPVPEALDFI 375 P +P+ +D Sbjct: 358 VEVPGEADIPKGMDPG 373 >UniRef50_A6F9S1 Flagellar biosynthetic protein n=1 Tax=Moritella sp. PE36 RepID=A6F9S1_9GAMM Length = 375 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 131/374 (35%), Positives = 219/374 (58%), Gaps = 1/374 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MSD S +KTE PT + + A++EGQI RS+EL + ++L+ S + + S + S + Sbjct: 1 MSDSSTQEKTEEPTQKKRDDAKKEGQIARSKELATAGLILISGSSLTWFAPSFSAFFSEL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + + + DP ++ + I + L+P I + L + +M GGL+F K+ Sbjct: 61 FTIQMQLTREVTRDPQYMVVMLGEAIINMLKVLIPFILVLNLTTFLLGIMPGGLIFVLKN 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 +QPK SK+NP+ G+KRM S T EL+K+ILK L+ L HW ++ + + Sbjct: 121 IQPKISKMNPISGLKRMVSKDTIIELIKSILKISLISFTLYKVLSLHWHELAAMAQMPLL 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + NAM ++ + + ++ + D+ +Q +S KKL+MS+Q+I+DE K +EG P + Sbjct: 181 NVLNNAMYIMSITLSFMGAALLIVAAIDLPYQKWSMNKKLKMSKQEIKDEHKGAEGSPEI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +I+Q+QR +++R+ + VP AD ++ NPTHY+VA++YD + AP +VAKG +ALR Sbjct: 241 KQKIKQIQRQMSQKRIDSAVPTADFVIVNPTHYAVAVKYDAARSQAPFIVAKGVDTMALR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I++I +++ +EAP L RA+Y ++ Q+IP QLY AVA +L + QL +R G++ Sbjct: 301 IKKIAESHDLDIIEAPELTRAIYHSTQVDQEIPAQLYTAVAYILTHIMQLSAYRKGRGKQ 360 Query: 360 PVQPTHLPVPEALD 373 P + +P L Sbjct: 361 PNTLPNFEIPATLK 374 >UniRef50_A0Z390 Flagellar biosynthetic protein FlhB n=3 Tax=unclassified Gammaproteobacteria RepID=A0Z390_9GAMM Length = 384 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 141/384 (36%), Positives = 233/384 (60%), Gaps = 4/384 (1%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++E ++TE PT RL++ARE+GQ+ RSREL +LL+LL +W G ++ Sbjct: 1 MAEEQTGQERTEEPTAKRLQQAREKGQVARSRELNTLLMLLPCAVALWLTGEFAMDAVTR 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + L + + + + + + ++P ++ V VAL+ P ++GGL+FS K Sbjct: 61 LFTGALTPPSEAMKVTSEVAPFLGATLMSGLEMIVPFLALTVFVALLGPSVMGGLIFSLK 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 S+ P K++P+ G R+FS ++ EL+K++LK LV V L ++M L++ Sbjct: 121 SMSPGLDKIDPIKGFGRIFSRKSLLELVKSLLKFFLVSGVAVLVLLSFEREVMGLISLPV 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + A ++ L + + +I +V DV FQ++ H +KLRM++Q+++DE K+++G+P Sbjct: 181 GEGIAQAGRMIMLTLIFLSASLILVVAIDVPFQLWDHTRKLRMTKQEVKDEMKETDGNPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +KG+IRQ QR A RRM+ADVP ADV++ NPTH+SVAL+YD+ +AP+V+AKGA +A+ Sbjct: 241 MKGKIRQKQREIADRRMLADVPTADVVITNPTHFSVALKYDQEGNTAPRVLAKGADHMAM 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +IR I +++ E PPLARAL+ E G +IPG L+ AVA VLA+V+ L++ + Sbjct: 301 QIRHIARAHDIVIYEEPPLARALFASTEAGDEIPGNLFLAVARVLAYVFHLRKAQAT--D 358 Query: 359 RPVQPTHLPVPEALDFINEKPTHE 382 +P + +PE I K ++ Sbjct: 359 YVPRPESIELPEEYADIMNKELND 382 >UniRef50_C9XJ38 Flagellar export protein n=7 Tax=Bacteria RepID=C9XJ38_CLODC Length = 604 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 119/348 (34%), Positives = 199/348 (57%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S DKTE TP + + R++G I +S+EL + LL ++ + L L+ L Sbjct: 251 STDKTEEATPKKKGEQRKKGNIAKSKELPVAMTLLAFTLLVPTLFSYVVDTLKSSLNYFL 310 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 D + + + I +I + + LP+ +++ +++ + G++F+G++L+P Sbjct: 311 SLDFYMNINYSSIEKLVIAGLMDFFKIFLPIAIPFLVLGIVANLFQVGILFTGETLKPNL 370 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 SKLNP+ G K MFS ++ + L+K ++ + F ++ +++L T M Sbjct: 371 SKLNPVSGFKNMFSMRSLSTLIKDTAIISILAYIGYTFFQDNYLDILKLGNIYLPTLMYT 430 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 DLV + + +I + D +Q +SH K+LRM++Q+++DE+K SEGDP +K +I+ Sbjct: 431 VKDLVYSILSKICVAMIVIAVADYVYQRYSHKKQLRMTKQEVKDEYKNSEGDPEIKAKIK 490 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q QR + +R M VP A VIV NPTH S+A++Y++ K AP VVAKGA +A +IREI Sbjct: 491 QKQRQISSQRTMQAVPSATVIVTNPTHLSIAVRYEKGKDQAPVVVAKGADYLAFKIREIA 550 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 N++P +E P+AR LY+ EI Q+IP +Y A AE+L V+++K Sbjct: 551 KGNDIPIIENKPIARLLYKQVEIDQEIPEDMYQAFAEILVAVYKIKNR 598 >UniRef50_D0KYP0 Flagellar biosynthetic protein FlhB n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYP0_HALNC Length = 379 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 151/375 (40%), Positives = 217/375 (57%), Gaps = 7/375 (1%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ +KTE P+ RL +ARE+GQ+ RSREL SL + V G + RL Sbjct: 1 MAENENGQEKTEEPSEKRLREAREKGQVARSRELGSLALTAGSAIVFLVMGGHMLSRLEQ 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 M + I DP + ++ L E LALLP V++A+ S +++GG FS + Sbjct: 61 MFRHAFTLSRAEIMDPATMFHRLALSFSEGFLALLPFFLAAVVLAVSSTLLVGGWNFSTQ 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +L P+F++LNPL G KRMFS ++ ELLK + K L+ ++ + L Sbjct: 121 ALAPQFNRLNPLSGFKRMFSMKSLVELLKTLAKFFLIAAIAIGLFEAMEKDFVGLGLMGL 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + A L+ L + LG++ + DV FQ++ + K LRM+RQ++ DE+K+ EG P Sbjct: 181 EAGLARAGTLLSWSFLGLSLGLLVVAMIDVPFQMYEYKKGLRMTRQEMIDEYKEVEGKPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK +IRQ+QR A+RRMM VP ADVI+ NPTH+SVAL+Y N +AP VVAKGA +A+ Sbjct: 241 VKQKIRQLQRQMAQRRMMEAVPTADVIITNPTHFSVALKYQPNSDAAPMVVAKGADEMAM 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 IR+I N+VP E+P LAR+L+ H E+G IP LY AVA+VLA+V+Q+K G Sbjct: 301 TIRKIANANHVPLFESPQLARSLFAHVEVGDAIPSGLYVAVAQVLAYVFQMK-----GAS 355 Query: 359 RPVQPTHLPVPEALD 373 P + VP+ Sbjct: 356 APPERPDPSVPDEFR 370 >UniRef50_B4RUM4 Flagellar biosynthesis protein n=3 Tax=Alteromonadales RepID=B4RUM4_ALTMD Length = 374 Score = 417 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 142/374 (37%), Positives = 222/374 (59%), Gaps = 2/374 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D S +KTE PT +L+ AR++GQ+ RSREL++ L+L+V + F G +A + + Sbjct: 1 MADSS-EKTEDPTGKKLDDARKKGQLARSRELSTTLVLIVSAVMFLFVGGWIAESVFKLT 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 D + G A+L + ++ + + LGG F+ + Sbjct: 60 RRMFILSRDETYDITHMFGAWGEAFSAVGPAVLLYMVVAMIAGIYGSIALGGFNFTWEGA 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PK SK++P+ G KRMF ELLK+I K +++ + L + + L E Sbjct: 120 KPKGSKMSPIQGFKRMFGTNGLVELLKSIAKVVVIIGMAIGALLFFEDEALHLDMELYPG 179 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + +AMD++ L++V G+IP+ DV +Q++ H K+++M++Q+++DE K +EGDP VK Sbjct: 180 NLFHAMDILKWAFLILVCGMIPIALIDVPYQMYKHNKEMKMTKQEVKDERKNAEGDPMVK 239 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GRIR++Q AA +RMM +VP+ADV+V NPTH+SVA++YDE + AP VVAKGA +A+ I Sbjct: 240 GRIRRLQYQAATKRMMQEVPQADVVVTNPTHFSVAIKYDEKGIRAPVVVAKGADELAMHI 299 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 R+I N+VP + +P LARA++ E+ +IP L+ AVA+VLA V+QLK R G+RP Sbjct: 300 RKIATANDVPLIPSPMLARAIFYSTEVDDEIPNALFMAVAQVLAHVYQLKAHRAGKGKRP 359 Query: 361 VQPT-HLPVPEALD 373 LP+P Sbjct: 360 KPLKRDLPIPPEYR 373 >UniRef50_C4G684 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G684_ABIDE Length = 387 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 141/353 (39%), Positives = 209/353 (59%), Gaps = 3/353 (0%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 E DKTE TP +LE AR+EG++ RS +L + L+LL+ V+ G +A+ Sbjct: 31 EGGDKTEKATPKKLEDARKEGRVARSSDLINGLMLLLMFFVLRIFGNFMAKGFLESFVKY 90 Query: 64 LHFDHSI---INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + I I D + ++ + ++A LP++ G LVA V+ G + K L Sbjct: 91 YNKTADISMEIFDVKQAVNLGNEIVFDIVIACLPVLIGSFLVAFAGNVVQIGWKVTTKPL 150 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PK +LNP+ G+KRMFS + EL+K+ILK + + V + W ++ L + Sbjct: 151 KPKLDRLNPIGGLKRMFSQEKVVELIKSILKVLAIAIVAYNEVKDRWLFILNLYDFEFMQ 210 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ N D+V + + + + + D +Q + HL LRMS+Q+++DE KQSEGDP VK Sbjct: 211 AIVNIFDIVLDVGVKISVLFVIIGIADFGYQKWKHLHDLRMSKQEVKDEMKQSEGDPQVK 270 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GRIRQ R ARRRMM ++PKADV++ NPTH++VA++YD+ K AP V+AKGA VA I Sbjct: 271 GRIRQKMREGARRRMMQELPKADVVITNPTHFAVAIKYDKEKAEAPYVLAKGADYVAATI 330 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +E E+ + +E PLAR LY + EIG+QIP +LY VAEVLA+V+ +K Sbjct: 331 KEAAKEHKIEIVENKPLARMLYYNVEIGEQIPPELYQMVAEVLAYVYSVKNKE 383 >UniRef50_C1SNG6 Flagellar biosynthetic protein FlhB n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNG6_9BACT Length = 352 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 128/351 (36%), Positives = 203/351 (57%), Gaps = 2/351 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+DE +KTE PT +L A+ EG + +SREL + + LL+ ++ G L L+ ++ Sbjct: 1 MADE-QEKTEDPTGKKLTDAKNEGNVAKSRELPAAVTLLLVTFFFYYYGPYLMHGLARLI 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + IN + ++ I E+ L P ++ V++V + S V+ G +F+ K+L Sbjct: 60 REIFMMTNYEINTQSAHK-IMLFSIIESAKLLAPFMALVLVVGVASNVLQTGFMFTPKAL 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 K +++P+ G R FS ++ EL+K++ K +V V + H ++ + Sbjct: 119 SAKLERIDPIKGFGRFFSKKSLVELMKSLFKVFVVTYVAYLIVKKHIVTIISMADMDFYD 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 +V V L + M D FQ + + L+MS+ ++++E KQ+EGDPHVK Sbjct: 179 IFSVFGKIVYEIMWKVSLLALFMALADFIFQKYQFKQDLKMSKHEVKEERKQAEGDPHVK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GRIR +QR AR+RMM DVPK+DV+V NPTH++VAL+Y + AP V+AKG L+ALRI Sbjct: 239 GRIRSIQREMARKRMMDDVPKSDVVVTNPTHFAVALKYSPGEDRAPVVMAKGQRLMALRI 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +EI ++ + E PP+AR+L++ +IG +IP LY AVAE+LA V + KR Sbjct: 299 KEIAKQSGILVHEDPPIARSLFKTVDIGDEIPENLYKAVAEILALVDKFKR 349 >UniRef50_C9PBY4 Flagellar biosynthesis protein FlhB n=4 Tax=Vibrio RepID=C9PBY4_VIBFU Length = 376 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 135/376 (35%), Positives = 226/376 (60%), Gaps = 2/376 (0%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MSD+ S DKTE +P +++KARE+GQIPR++E T+ +I L + ++ + ++G Sbjct: 1 MSDQASSQDKTEKASPQKVKKAREQGQIPRAKEFTTAVIFLAVAIYFYAQLPAIWQSIAG 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + L + +++P ++ Q+ + + L+P+ +++V L S ++LGG +F Sbjct: 61 VFRYNLSLTRADLDNPMQMVEQLGHSLGMVIELLMPMFLVIIVVTLASSMILGGWLFRPA 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +L PK +KLNP+ GI R+FS ++ EL+K+ LK ++ +V +L +H M+ + Sbjct: 121 NLLPKLNKLNPISGISRIFSTRSLVELVKSTLKVSVIFAVLYGYLDNHLQPMLGMQGLPL 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 M+++ LL+ ++ D+ +Q + HLK+L+M++Q++++E+K +EG P Sbjct: 181 NQGFILIMNILFEGLLLMGFALLVFGVIDIPYQRWEHLKELKMTKQELKEEYKNNEGRPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K RIRQ+Q+ ARRR+ VPKADV++ NPTHY+VAL+YD AP VVAKG AL Sbjct: 241 IKQRIRQIQQQFARRRIDKMVPKADVVIVNPTHYAVALKYDPALSDAPFVVAKGVDETAL 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 I+ + +N V + +PPL R++Y I Q +P QLY AVA +L +V QLK +R G+ Sbjct: 301 HIQRLARDNQVEIIHSPPLTRSIYYTTAIEQAVPSQLYVAVAHILTYVLQLKAFRSGSGE 360 Query: 359 RPVQPTHLPVPEALDF 374 +P+ H +P L Sbjct: 361 QPLPLPHFSIPNHLQH 376 >UniRef50_Q2W9Q2 Flagellar biosynthesis pathway n=3 Tax=Magnetospirillum RepID=Q2W9Q2_MAGSA Length = 355 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 130/352 (36%), Positives = 208/352 (59%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+++SDDKTE PT +L +ARE+G IP S+E+ L+ + V+ +AR + +L Sbjct: 1 MAEDSDDKTEEPTDRKLSQAREQGNIPTSQEVKIWASLVGALVVVTLFAPYMARDIGRLL 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + H+ + + + + + L+ + +V++A+ S + GL+F L Sbjct: 61 LPFVEHPHAFPMGREDVGQLLSGITVDMIKLLIMPMMMLVVLAIASAMGQSGLMFLPDKL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 F KL+P G++R+FS + E +K++ K +G V L H + L A + Sbjct: 121 TLDFGKLSPGKGLQRIFSGRNLVEFVKSLFKVSAIGFVIFLILKSHMSEYAGLAALDLMA 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + V ++VVL V + D F+Q ++ ++++M++Q+I+DE KQ+EGDP +K Sbjct: 181 VLDYLRHQVITMIIVVVLMVFVLAAADWFYQRWAFTQQMKMTKQEIKDEHKQTEGDPMIK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GR+R ++ AR+RMMA VP+A V+V NPTHY+VALQYD++ M AP +VAKG L+A RI Sbjct: 241 GRLRALRMQRARQRMMAAVPRASVVVTNPTHYAVALQYDQDSMGAPVLVAKGVDLIAKRI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 R++ EN VP +E PPLARALY E+ Q+IP + Y VAE++ +V +LK Sbjct: 301 RDLATENEVPIVENPPLARALYATVELDQEIPPEHYKTVAEIIGYVMKLKGE 352 >UniRef50_UPI0001C3562E flagellar biosynthesis protein FlhB n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3562E Length = 355 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 129/353 (36%), Positives = 197/353 (55%), Gaps = 1/353 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS +D+KTE TP R + R++G + +S ++ ++ LLV + + + R L + Sbjct: 1 MSVAADEKTEKATPKRRQDERKKGNVFQSSDVIAVCSLLVLFNSLNALAPMIYRTLKASM 60 Query: 61 SAGLHFDHSIIN-DPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + S + +++ + A LPL+ V VA+++ L FS Sbjct: 61 ELFFSYAASTEPLTAEDLPDKLLKAMFLFGQAALPLLFIGVAVAVVTTFFQTRLSFSADV 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++ K +++ L G KRMFS ++ ELLKA++K ++ V ++ + RLM + Sbjct: 121 MKFKMDRISLLKGFKRMFSIRSVVELLKAMIKITILAWVIYSYIKGRIHEFARLMDGTVQ 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A D V I + FD +Q + + K LRMS+Q+I+DE+KQ+EGDP + Sbjct: 181 AAFVYVGDTAVSLVNTVGAAFIFLAAFDYLYQWWEYEKNLRMSKQEIKDEYKQTEGDPQI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR+ QR A RMM +VPKADVI+ NPTH++VAL YD N AP V+AKGA +AL+ Sbjct: 241 KGRIREKQRQMASMRMMQNVPKADVIIRNPTHFAVALGYDSNTNRAPVVLAKGADHLALK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 I E+G N V +E PLAR LY E+ +IP + Y VA+VLA+V++LK+ Sbjct: 301 IVEVGEANGVYIMEDKPLARGLYASVEVDMEIPEEFYQTVAKVLAFVYKLKKK 353 >UniRef50_A5D0H9 Flagellar biosynthesis pathway, component FlhB n=2 Tax=Clostridia RepID=A5D0H9_PELTS Length = 357 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 120/357 (33%), Positives = 208/357 (58%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ + ++TE TP R+++AR +GQ+ RS +LT L L V++++ L L Sbjct: 1 MAGGTQERTEQATPRRIQEARRKGQVARSTDLTGALCLAAMVALLYAVKDEFFLDLQRYL 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 I + + + + + P I+ V+ A++S ++ G +FS ++L Sbjct: 61 GWYFSQVAGFIASEEVPGAVLYDTVLFSAKLMAPFIAVPVVTAVVSNLVQVGFLFSTEAL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK S LNP G++R+FS+++ EL+K++ K ++G +T + + + ++ + P Sbjct: 121 NPKLSVLNPATGLQRIFSSRSLVELVKSVFKFTVIGIITYYLIKANLADLLLVFNRPPGG 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + A + + + D +Q + + K L MSRQ++++EF+Q+EGDP +K Sbjct: 181 IYREVAGFILKVAGWAAVAYLILSLLDYIYQRYEYKKSLMMSRQELKEEFRQTEGDPLIK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R R+M+RA + R++++VPKA V+V NPT +VAL+Y++ +M APKVVAKGAG +A RI Sbjct: 241 SRQREMRRAISLNRIISEVPKATVVVTNPTSLAVALRYEQGQMPAPKVVAKGAGRIAGRI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 +EI E++VP +E +AR +Y + E+ Q IP ++Y AVAE+LA V++LK + G Sbjct: 301 KEIAREHDVPIVENKEIARFIYYNVELDQVIPFEIYQAVAEILALVYRLKARKNYRG 357 >UniRef50_Q47I36 Flagellar biosynthetic protein FlhB n=1 Tax=Dechloromonas aromatica RCB RepID=Q47I36_DECAR Length = 379 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 170/377 (45%), Positives = 242/377 (64%), Gaps = 2/377 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD +KTE PT R+E+ARE+GQ+P SREL + L+L V + W G +R + Sbjct: 3 MAEDSDLEKTEEPTGRRIEQAREQGQVPHSRELATFLVLAVAGATFWMMGSWFMQRSLVI 62 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + G + + DP+L+L ++ + +A+ PL+ ++L A++ P L VFS K+ Sbjct: 63 MQKGFFVESRYMRDPDLMLPRLAEISGDALFVFSPLLGLLLLAAILPPFFLNAWVFSPKA 122 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P ++LNPL G RMFS + EL KA+LK +LVG V +W ++ L+ E Sbjct: 123 LVPDLNRLNPLSGFGRMFSWNSLMELAKAVLKAVLVGGVAAMLIWKERDEIFGLLGEPLE 182 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + +A LV L++V ++ +V DV FQ++ + KL+MS+++++ E K+ GDPHV Sbjct: 183 VGLAHAGHLVSFSFLILVATLVLVVVADVPFQLWQYFDKLKMSKEEVKQEMKEMMGDPHV 242 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR +Q AAR+RMM+ VPKA+V+V NPTHY+VAL Y M APKVVAKG G VAL+ Sbjct: 243 KGRIRSLQMQAARKRMMSAVPKANVVVTNPTHYAVALAYQTG-MGAPKVVAKGVGAVALK 301 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I+EI E+ VP +EAPPLARALY+H+E+ +IP LY AVAEVLA+++QL WR GG Sbjct: 302 IKEIANEHAVPIMEAPPLARALYKHSELDTEIPSALYNAVAEVLAYIYQLANWRQVGGIY 361 Query: 360 PVQPTHLPVPEALDFIN 376 PV P LPVP L Sbjct: 362 PVPPRDLPVPPELVPEA 378 >UniRef50_C6MMA1 Flagellar biosynthetic protein FlhB n=1 Tax=Geobacter sp. M18 RepID=C6MMA1_9DELT Length = 352 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 117/352 (33%), Positives = 191/352 (54%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD+ KTE PT ++ A+ +G + RSRE+TS + L+ + ++ + + L G + Sbjct: 1 MSDDKHSKTEKPTSKKISDAKSKGNVARSREMTSAVTLITAMIALYASSGIMLKTLQGTM 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 SI P + +I + L P + ++ L + GG+ S + L Sbjct: 61 KDIFGGLASIEITPGGVHHLMIKEFANLGIMLTPFLLVGIISGLAVEISQGGINLSSEKL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + +LNP+ G+ R+F+ + +++K+ +K +VG + L ++ L+ + + Sbjct: 121 KFDLGRLNPVQGMGRLFNKDSVFQVVKSFIKMGIVGYMAYKILAEEMEGIIFLVDQDLLG 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + L +I + D+ F + L L+M++Q+++DE K +EGDP +K Sbjct: 181 ILQFIGHISFKIVLHTCGVLIILAVLDLAFVKWRFLDNLKMTKQEVKDEHKNTEGDPAIK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G+ RQ ARRRM +P ADV+V NPTHY+VAL+YD KM+AP V+ KG +AL+I Sbjct: 241 GKQRQKAFQMARRRMRQIIPTADVVVTNPTHYAVALKYDRLKMAAPVVLFKGVDQMALQI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 + + ENNV +E LAR LY E G +IP L+AAVAE+LA+V+ LKR Sbjct: 301 KIVARENNVTLVENRFLARELYAQVEEGSEIPEGLFAAVAEILAYVYSLKRR 352 >UniRef50_B1LC25 Flagellar biosynthetic protein FlhB n=6 Tax=Thermotogaceae RepID=B1LC25_THESQ Length = 374 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 128/347 (36%), Positives = 201/347 (57%), Gaps = 5/347 (1%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 ++TE TP + + REEG+ P SREL + LV + G R++ + A L F Sbjct: 32 ERTERATPRKRRRVREEGRAPVSRELNMAVTFLVFALALKIFGYQGVERITEDVQAFLSF 91 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + +L + ++ +L + + ++ ++ + +F+ K+L+P ++ Sbjct: 92 -----EETEDLLVNAVNTFKDVLLIIGAFVVFSMVAGVMIGALQTRFLFAPKALKPDLNR 146 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 +NP+ G KR+FS ++ ELLK++LK +VG V L + W +M+ L + A N Sbjct: 147 INPIEGFKRLFSLRSLVELLKSVLKVAIVGIVVYQVLKNRWDEMILLTEMNVNDAFANFW 206 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 D+ L + ++ + FD F+Q + K +RM++Q+++DE K+ EG+P +K R RQM Sbjct: 207 DIASEITLKSGMVLLALAVFDYFYQRWEFEKSIRMTKQEMKDELKEVEGNPEIKRRQRQM 266 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 RRRMM +VPKADV++ NPTH++VAL+YD + M+AP VVAKG +AL+I EI E Sbjct: 267 MYDILRRRMMEEVPKADVVITNPTHFAVALKYDPDTMNAPVVVAKGVDHLALKIIEIAKE 326 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 N+VP L P LARALY EIG++IP + Y VAEVL +V+ K R Sbjct: 327 NDVPVLRNPSLARALYYKTEIGEEIPVEFYRIVAEVLVYVYTKKGVR 373 >UniRef50_B9L5B0 Flagellar biosynthetic protein FlhB n=2 Tax=Thermomicrobia (class) RepID=B9L5B0_THERP Length = 363 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 126/358 (35%), Positives = 195/358 (54%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 ++TE TP R ++AR+ GQ+PRS +LTS L+LL G + + + + L L Sbjct: 4 ERTERATPRRRQEARKRGQVPRSADLTSALVLLAGAFFLPWYAGAAGQTLWDYLERAFSG 63 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 I+ + LP++ V + S ++ G VF+ L+P + + Sbjct: 64 PLPRDLTGPDIVALAWASGATVLKLALPILGLFAAVGVASTLVQAGFVFAPAVLKPDWRR 123 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 ++P+ G +R+FS + E KA+LK +V +VT + P+ L P Sbjct: 124 IDPIAGFQRLFSRRGLFETGKALLKIAIVLAVTYPLIQRDLPRYADLTGAEPAAIAQAIG 183 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 + A+ V + + D FQ + ++LRM+R ++++E +Q+EGDP +K RIR++ Sbjct: 184 QSMRDLAVRVGAAYLALAILDYGFQRWDLEQRLRMTRHELKEELRQTEGDPEIKARIRRL 243 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 QR A RRMMA VPKA V+V NPTH +VAL+Y+ M AP VVAKGAG VA RI I + Sbjct: 244 QRQMAMRRMMAQVPKATVVVTNPTHLAVALRYEPRSMRAPVVVAKGAGAVAERITAIARQ 303 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQPT 364 + +P L PLA+ALYR E+GQ+IP LY AVA+++A+V++L+R + Sbjct: 304 HTIPVLRNQPLAQALYRTVEVGQEIPITLYEAVADIIAYVYRLRRASAPVQSETPPTS 361 >UniRef50_Q0ANB5 Flagellar biosynthetic protein FlhB n=3 Tax=Hyphomonadaceae RepID=Q0ANB5_MARMM Length = 363 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 123/358 (34%), Positives = 199/358 (55%), Gaps = 2/358 (0%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ + KTE PT RL+ AR++G + +S+E+ +L G++++ F ++R L+G Sbjct: 1 MAEGEDDSQKTEEPTQRRLDDARKKGDVAKSQEIPGWFVLAAGLALLSFIFPMMSRALAG 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 L H +P ++G + + + + + I + + + G++F+ + Sbjct: 61 NLEVFFEQPHDFAINPGAMMGLMQAVAWQVVAIVGLPIGLLAVAGFAGHYVQQGMLFTTE 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +QPK SKLNP+ G KR F Q A LK + K LV ++ + L A Sbjct: 121 KIQPKLSKLNPIEGFKRNFGPQGLANFLKGVGKMALVAVAAFLVIYPKREILAGLPALDI 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + + L + + G D FQ S +K+ RMSR++I+DE KQSEGDP Sbjct: 181 GSLLSLVRQGAIELLLAALTVYAVIAGLDYIFQRQSFMKRNRMSRREIKDEMKQSEGDPL 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 V+ ++RQ+++ ++RRMM VP A V+V NPTHY++AL Y + + AP VAKG VAL Sbjct: 241 VRAKLRQLRQERSQRRMMTKVPDATVVVTNPTHYAIALHYVQGETPAPVCVAKGVDEVAL 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 RIRE+ E++VP +E PPLARAL+ A++ ++IP + + AVA+V+ +V L + R A Sbjct: 301 RIRELAEEHSVPIVEDPPLARALHATADLDEEIPTEHFQAVAKVVGYVLSLSQGRRAR 358 >UniRef50_Q3ADC9 Flagellar biosynthetic protein FlhB n=2 Tax=Bacteria RepID=Q3ADC9_CARHZ Length = 353 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 119/354 (33%), Positives = 206/354 (58%), Gaps = 2/354 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+DE D +TEAPTP RL +AR GQ+ +S+EL ++ L+ ++ G ++ + Sbjct: 1 MADEQRDQRTEAPTPRRLAEARRRGQVFKSQELNFAVMFLIFFLLLLVLGGYFYQQFYLL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 I P+ + G ++ + +LP + +L + ++ G +F+ + Sbjct: 61 SRNVFRNMF-IELTPSAVRGLLLYYFGWSFKIVLPFLLLGMLAGIALNLVQVGFIFTTEP 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+P + ++NPL G R+FS + ELLK LK + V + + P + + + ++P Sbjct: 120 LKPSWERINPLSGFSRIFSRRNWVELLKNFLKFGFLALVIYLRIKSNLPLIFQKIGQAPA 179 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 L+ AL +L + D ++Q + + L+M++Q++++E++Q+EGDP + Sbjct: 180 EYFNGYFSLIKKIALDTLLVLFLFGAVDYWYQRREYYQSLKMTKQELKEEYRQTEGDPLI 239 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K R+R+ QR A ++ +VP+A V+V NP H +VAL+Y+ KM+APKVVAKGAG +A + Sbjct: 240 KARLRERQRQIALNQIAREVPQATVVVTNPVHIAVALKYERGKMAAPKVVAKGAGFLAEK 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 I+EI +NV +E +AR LY++ E+G++IP +LY AVAE++AWV++ KR R Sbjct: 300 IKEIARAHNVEIVENVEVARFLYKNCEVGEEIPEELYNAVAEIIAWVYRKKRKR 353 >UniRef50_C5EFG7 Flagellar export protein n=3 Tax=Clostridiales RepID=C5EFG7_9FIRM Length = 353 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 124/350 (35%), Positives = 195/350 (55%), Gaps = 1/350 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +D+KTE TP R + R++G + +S ++ ++ +LV + + R + + Sbjct: 3 ADEKTEKATPKRRQDERKKGNVFQSNDVAAVCSMLVLFHSLKALAPHMYRNFRDAMYMFM 62 Query: 65 HFDH-SIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 S ++ + + + LPL+ VL A+ + FS L+ K Sbjct: 63 GMAADSDSFHQEAGREMLVKAMLLFLESALPLLFIGVLTAVAVTFFQTRMAFSMDVLKFK 122 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG 183 +++PL G KRMFS ++ EL+KA++K ++G V FL ++ RLM + A+ Sbjct: 123 MERISPLKGFKRMFSIRSVVELIKALIKITILGWVVYVFLKGRMEELSRLMEGTVEGALI 182 Query: 184 NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRI 243 + V V + I + D +Q + + K LRMS+Q+I++E+KQ+EGDP +KG+I Sbjct: 183 FTGNTVISLVDTVGVAFIFLASMDYLYQWWEYEKNLRMSKQEIKEEYKQTEGDPQIKGKI 242 Query: 244 RQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREI 303 R+ QR A RMM +VPKADVIV NPTHY+VAL YD ++ AP V+AKGA +AL+I E+ Sbjct: 243 REKQRQMASMRMMQNVPKADVIVRNPTHYAVALGYDADRNRAPVVLAKGADHLALKIVEV 302 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 G N V LE PLAR LY E+ +IP + Y VA++LA+V++L + Sbjct: 303 GEANGVYILEDRPLARGLYASVEVDMEIPEEYYQTVAKILAFVYKLNDKK 352 >UniRef50_A1VY54 Flagellar biosynthetic protein FlhB n=27 Tax=Epsilonproteobacteria RepID=A1VY54_CAMJJ Length = 368 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 134/368 (36%), Positives = 217/368 (58%), Gaps = 1/368 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ E +KTE PT ++E AR+EG +P+S++ +++ L++GV++ F + R+ + Sbjct: 1 MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTITLFMMSFMGERIVNLY 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 F + D +I +I I E ++ L P++ +++ ++ +M G +F+ K + Sbjct: 61 RYYQSFIG-VEFDLRIIQAIMIKSIFEVLIILAPIVLSIMIAGVLGNIMQFGFIFTTKPI 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 P K+NPL G+K +FS + E +K ILK +V ++ L ++ R+ + +T Sbjct: 120 MPNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFIVLLKFMQELPRVELYTMVT 179 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + D + A +V++ + + DVF F + K LRMS+Q+I+DE+KQ EGDP VK Sbjct: 180 QLAWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGLRMSKQEIKDEYKQMEGDPQVK 239 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GRIR++Q AARRRM+ DV ADV++ NPTHY+VA++YD +K AP+VVAKG +ALRI Sbjct: 240 GRIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIRYDTSKEQAPRVVAKGVDFLALRI 299 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 +++ ENNV E PPLAR LY+ ++ IP +++ AVAEVL +V+ GQ Sbjct: 300 KQVAYENNVVVYENPPLARELYKACDVNDLIPREMFKAVAEVLGFVYNTNNKSRLAGQVK 359 Query: 361 VQPTHLPV 368 + V Sbjct: 360 KETKTFKV 367 >UniRef50_A6D5X3 Flagellar biosynthetic protein n=4 Tax=Gammaproteobacteria RepID=A6D5X3_9VIBR Length = 382 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 124/382 (32%), Positives = 203/382 (53%), Gaps = 2/382 (0%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS+ +S DK+E P+ H+L KAR EGQ+PR++E S + L+ V+ + + Sbjct: 1 MSEHQDSGDKSEQPSQHKLSKARREGQVPRAKEFVSSVTLISVVAYYVLNIDMIKQTFIE 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + FD I+ + + + ++ PL+ ++ A+ +LGG + S Sbjct: 61 LFLVSFQFDTQTISHWMTSVELLGTALFSMVMLFFPLLIYQIIAAIFGSTLLGGWILSPS 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L PK K++P+ GIKR+FS Q+ EL K + K L S+ + + + + L++ Sbjct: 121 LLTPKLEKISPIKGIKRIFSTQSVVELFKNVFKVTLFFSLLYWVISSYISVITNLVSAHF 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 T + + ++L V+ FD +Q K+++M++Q+++DE K+ EG P Sbjct: 181 DTVVFTVATITIEYLGYLLLIVLIFGLFDFPYQRHEFTKQMKMTKQEVKDEHKEQEGRPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK RIRQ+Q A+R VPKA+V++ NPT Y+VAL YD + AP VVAKG VA+ Sbjct: 241 VKARIRQIQTQNAKRGANERVPKANVVLTNPTQYAVALIYDLTQAEAPFVVAKGKDEVAV 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 IRE+ A+++V +E+ L RA+Y ++ Q +P QL+ A+A +L +V QLK WR Sbjct: 301 YIRELAAKHSVEVVESAELTRAIYNTTQVDQMVPNQLFVAIAHILTYVNQLKAWRQGQRS 360 Query: 359 RPVQPTHLPVPEALDFINEKPT 380 +P +P+ NE Sbjct: 361 KPNGLPRFDIPKVWSDPNEPAE 382 >UniRef50_Q3V867 Flagellar biosynthetic protein FlhB n=5 Tax=Legionella RepID=Q3V867_LEGPH Length = 383 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 143/381 (37%), Positives = 238/381 (62%), Gaps = 3/381 (0%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+DE S +KTE P+ RL+++R++GQ+ RS++ + +ILL + G L+ +++ Sbjct: 2 MADEEQSQEKTEQPSSKRLKESRKKGQVARSKDFNATVILLFTGLGFFIFGKQLSLQIAS 61 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 ++ FD I+ N L + L + + +++PL+ + +++L++P+++GG VFSG+ Sbjct: 62 IMQQAFDFDRDILVTGNNSLENLFQLTKSGLWSVVPLLLVIFILSLLAPLLMGGWVFSGQ 121 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 S+QPKFS+LN L G+KRM S + E+LKA LK +LV S + L P ++ L Sbjct: 122 SIQPKFSRLNVLKGLKRMISLKGFVEMLKAFLKFVLVASASILVLRSQVPLLLELGKAPL 181 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ + + ++ +L+ +I + DV FQ++ H K ++M++Q+++DE+K++EG P Sbjct: 182 EIAITSGVMILLKSFVLISASLILIAAIDVPFQLYEHSKSIKMTKQELKDEYKETEGKPE 241 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK IR+ Q+ ARRRMM++VPKADVI+ NPTHY+VAL Y + AP V+AKG LVA Sbjct: 242 VKSAIRRAQQETARRRMMSEVPKADVILTNPTHYAVALSYQKKGKKAPVVIAKGKNLVAF 301 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +I ++ E+ +P + P LARA+Y ++ +IP LY AVA+VLA+++QL R R Sbjct: 302 QISKVAKEHKIPIISVPALARAIYFSTKLNAEIPRGLYVAVAQVLAYIFQL-RDRQRYDY 360 Query: 359 RPVQPTHLPVPEALDFINEKP 379 +P ++P+P L E+ Sbjct: 361 KPEILQNVPIPPELAREAEEE 381 >UniRef50_Q3A5E5 Flagellar biosynthetic protein FlhB n=3 Tax=Deltaproteobacteria RepID=Q3A5E5_PELCD Length = 351 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 125/352 (35%), Positives = 208/352 (59%), Gaps = 1/352 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D ++TE T R R++GQ+ +S+E+ + ++ + + F R LS ML Sbjct: 1 MADSDQERTEQATGKRRADFRQKGQVAQSKEVHTAALMTGTLLLWTFYAPLFWRTLSDML 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 P + + L ++ L L P++ +++ ++S + G +F+ K L Sbjct: 61 HHLWSLAGDFEVTPVSAVMLLGQLGQKIALLLAPIMLTTLVIGILSSYLQVGWLFTTKPL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 P FSK+NP+PG+ ++ S ++ E++K++LK LVG V + + Q + L+ Sbjct: 121 APDFSKMNPVPGLAKLISKRSFIEVVKSLLKVFLVGVVAYKVILAEFGQALDLVDMDIND 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 ++ + L +I + D F + +K++M++Q+ ++E K+SEGDP +K Sbjct: 181 SVVYLARVAARILLRTCGVMILLALLDFLFVRWEMEQKMKMTKQEQKEEHKESEGDPQIK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIR MQ AARRRMMA+VPKADV++ NPTH SVAL YD ++MSAP++VAKGA VA+RI Sbjct: 241 ARIRSMQMQAARRRMMAEVPKADVVITNPTHLSVALAYDRSRMSAPQIVAKGADAVAMRI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 REI E+ VP +E P+AR L++ ++G+ +P +++ AVAE+LA+V+ LK+ Sbjct: 301 REIAREHKVPLVENKPVARVLFK-VDLGKDVPEEMFQAVAEILAYVYGLKKR 351 >UniRef50_A8TPM3 Flagellar biosynthesis protein B n=1 Tax=alpha proteobacterium BAL199 RepID=A8TPM3_9PROT Length = 358 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 139/354 (39%), Positives = 209/354 (59%), Gaps = 2/354 (0%) Query: 1 MSDESDD--KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MSD DD KTE PT +L AR++GQI +S+E+T+ LL + +A +L Sbjct: 1 MSDSQDDSQKTEEPTGKKLGDARKKGQIAQSKEVTNFASLLALTFAVTILAPYMAIQLYS 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 ++ + D ++ L+ + LAL P + V+++ + + + G++F+ Sbjct: 61 SMAVVIEHAAVARIDAGSTSEILMGLVIDTFLALAPTLGTVMVLGVAATLGQSGILFTTD 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + PK KL+PL G KR+FS ++ E +K I+K +V + + + L+ Sbjct: 121 PIMPKLEKLSPLAGFKRLFSLKSIVEFIKGIIKLAIVAFIAYVLMSPELDRAEELLTMDL 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 I + LV + V+ + + D +Q + H K+LRMSRQDIRDE KQ+EGDP Sbjct: 181 IEVLKEIQTLVIRLMMGVLAFMAVVAIADYIYQRYEHYKQLRMSRQDIRDEHKQAEGDPQ 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K R+RQ++ ARRRMMA VPKADV++ NPTH++VALQYD + M+AP VVAKG+ VA Sbjct: 241 IKARLRQIRADRARRRMMAAVPKADVVITNPTHFAVALQYDTSAMAAPVVVAKGSDAVAF 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 RIRE+ E+ VP +E PPLARAL+ EI +QIP Y AVA+V+++V++LK Sbjct: 301 RIREVAKEHKVPIVENPPLARALFASVEIDEQIPETYYKAVAQVISYVYRLKGR 354 >UniRef50_Q97H65 FliR/FlhB fusion protein n=1 Tax=Clostridium acetobutylicum RepID=Q97H65_CLOAB Length = 610 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 117/349 (33%), Positives = 189/349 (54%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 DKTE TP R +AR++GQ+ RS+E+ L+ +I GG + L M+ Sbjct: 261 DSDKTEEATPKRKSEARKKGQVARSKEVPLAATLVAITFIISLGGQTFFNGLGVMMQTFF 320 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + II +I A + V++V +++ + G + + + ++P Sbjct: 321 QSYIHSNLTELDLRRIIIFVILNAGKFIFMFGVPVMVVGIVANIAQTGWITTTEPIKPDL 380 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNP+ G KR+FS T LLK ++ ++ V FL ++ + L Sbjct: 381 KKLNPISGFKRIFSMTTIVNLLKDLVVVAVLSVVGYKFLMSNYGDIANLNNLMVQYIPQA 440 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 + V +V L +I + GFD + + + K ++M++ ++++EFKQ+EGDP +KG+ R Sbjct: 441 YLSYVISIFRIVALIMIVIAGFDFVYNRYKYKKDMKMTKHEVKEEFKQAEGDPEIKGKRR 500 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q R R M++ VP A V++ NPTH SVA++Y+ AP VVAKGA ALRI+EI Sbjct: 501 QRMREIVTRTMLSKVPDATVVITNPTHISVAIKYERGVDKAPTVVAKGADRTALRIKEIA 560 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 ENNVP +E PLAR +++ E+ +QIP ++Y VAE+LA V++L + + Sbjct: 561 KENNVPIMENKPLARLIFKKVEVDEQIPAEMYQTVAEILALVYKLNKKQ 609 >UniRef50_C5S862 Flagellar biosynthetic protein FlhB n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S862_CHRVI Length = 384 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 149/381 (39%), Positives = 236/381 (61%), Gaps = 6/381 (1%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ +++EAPT RL ++RE+GQ+ RSREL + +IL+VG + + F G +A R+S Sbjct: 1 MAENENGQERSEAPTAKRLRESREKGQVARSRELNTFIILIVGGAFLLFLGGGMAARISQ 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 ++ G + +I D L++ + L+ A+L L PL ++++AL+ P+++GGL FS + Sbjct: 61 LMIDGWTLERGLIFDEGLLVPHLQHLLGRALLILAPLFGLLMVIALMGPILVGGLNFSTQ 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +L PKFSK+NP+ G+KR+FS Q EL+K + K LVG V + W ++ L Sbjct: 121 ALMPKFSKVNPISGLKRVFSVQGLMELVKGLGKFGLVGIVATLAIMSIWGNLLTLGELPV 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ + + L+ ++ + DV FQ+++H K+LRM+ Q+I+DEFK++EG P Sbjct: 181 EQAIVQTVHMAAWLFLIAAAALLVVAAIDVPFQVWNHQKQLRMTLQEIKDEFKETEGKPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VKGRIRQ+Q ++RRMM++VPKADV++ NPTHY+VA+ Y M AP+++AKG VA Sbjct: 241 VKGRIRQLQHEMSQRRMMSEVPKADVVITNPTHYAVAISYVPAIMPAPRLLAKGTDAVAQ 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 IR + E+ + +EAP +ARA+Y ++ Q+IP L+ AVA +LA+V+Q++R Sbjct: 301 AIRALAEEHRIVRVEAPRVARAIYFTTDLNQEIPNGLFVAVARILAYVYQIRRE----DP 356 Query: 359 RPVQPTHLPVPEALDFINEKP 379 LPVPE P Sbjct: 357 DVELADDLPVPEEYLDPRSAP 377 >UniRef50_A6M184 Flagellar biosynthetic protein FlhB n=4 Tax=Bacteria RepID=A6M184_CLOB8 Length = 613 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 117/349 (33%), Positives = 196/349 (56%), Gaps = 1/349 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 DDKTE TP + ++R +GQI RS++++ + +++ +I L +L Sbjct: 265 GDDKTEEATPKKKSESRNKGQIARSKDVSVAITMVICTLLISSLWGMLTNGFKEVLIYFF 324 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 +F + I I + + LLP +++ +I+ ++ G + + + L+P F Sbjct: 325 NFPMIGDFNHATISNLAITTVIKIGSYLLPFALPIMVGGVIASLLQTGFIITAEPLKPSF 384 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNPL G+K M S ++ +L K ++ +V + ++ ++ ++ + + Sbjct: 385 GKLNPLSGLKNMISKRSIVDLSKNLVVITIVSIICYKYISGNYQSILGISNLYLPSLSDE 444 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +LV + + ++ + G D F Q+ H K++RM++Q+++DE+KQSEGDP +KG+I+ Sbjct: 445 VKNLVVGIFKQICIVLVIIAGIDYFLQVRMHNKEMRMTKQEVKDEYKQSEGDPKIKGKIK 504 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENK-MSAPKVVAKGAGLVALRIREI 303 Q QR +RMM V A V++ NPTH ++A++Y+E K M APKVVAKGA VA +I+ I Sbjct: 505 QRQRELGMKRMMQSVADATVVITNPTHLAIAIKYEEGKDMEAPKVVAKGADYVAFKIKSI 564 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 EN VP +E PLAR +Y E+ Q IP LY AVAE+L V +LK+ Sbjct: 565 AKENEVPVIENKPLARLMYDRVEVDQDIPQDLYQAVAEILVVVMKLKKK 613 >UniRef50_C6NWP2 Flagellar biosynthesis protein FlhB n=2 Tax=Proteobacteria RepID=C6NWP2_9GAMM Length = 375 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 167/374 (44%), Positives = 251/374 (67%), Gaps = 3/374 (0%) Query: 1 MSDE-SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M++E S ++TEA TP + E AR++GQ+PRSREL++ +LL+ S+++ G + + Sbjct: 1 MAEEQSQERTEAATPKKREDARKKGQVPRSRELSTSALLLLSASLLYGLGSEIQTMATDF 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L AGL +++++ +L ++ + A+ +LPL ++LV +++ + LGG FS K+ Sbjct: 61 LRAGLRLTPAVMSNHQDLLRHLVQMAGLALSDVLPLWLALMLVVVLASIALGGWNFSTKT 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P FS L+P+ GI+R+FS + EL+KA LKT++VG + +W +++ L+ SP Sbjct: 121 LIPNFSHLDPIEGIQRLFSRRGFLELVKAALKTLVVGGIGVTVIWAQRGELLGLIQISPK 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 +AM + + + GL L++ +G + +V FDV FQ++S +KL+MSRQDI+DE K+ +G+P + Sbjct: 181 SAMVSLLSMSGLVFLIMAVGTLLIVLFDVPFQLWSFNEKLKMSRQDIKDEMKEMDGNPQI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K ++R MQR ARRRMMA +P A V+V NPTHY+VAL+Y E++ AP V+AKGAG VALR Sbjct: 241 KTKVRSMQREMARRRMMAAIPSASVVVTNPTHYAVALRYVESENRAPVVLAKGAGNVALR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+ E+ VP +EAPPLARALY H E+ Q+IP LY AVAEVLA++ QL+ GQ Sbjct: 301 IRELAQEHGVPLVEAPPLARALYHHVELEQEIPALLYRAVAEVLAYLHQLR--LAPPGQA 358 Query: 360 PVQPTHLPVPEALD 373 P VP LD Sbjct: 359 LELPEQWSVPPELD 372 >UniRef50_A7K1M6 Flagellar biosynthesis protein FlhB n=13 Tax=Vibrionaceae RepID=A7K1M6_VIBSE Length = 375 Score = 406 bits (1044), Expect = e-112, Method: Composition-based stats. Identities = 139/375 (37%), Positives = 221/375 (58%), Gaps = 1/375 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MSD+S DKTE +P +++KAR+EGQIPR++E T+ +I L + S+ +SG+ Sbjct: 1 MSDQSSQDKTEKASPQKVKKARQEGQIPRAKEFTTAVIFLAVALYFYSQLNSIWESMSGI 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + + + +P ++ Q+ + + LLPL + +++V S ++LGG +F + Sbjct: 61 FRYNMMLTRADLENPKQLVEQLGQSLAVIIDMLLPLFTVIIIVTCGSSLVLGGWMFRPAN 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + PK SK+NPL GIKR+FS ++ ELLK+ K ++ + +L +H ++ + Sbjct: 121 VMPKLSKINPLSGIKRIFSTRSVVELLKSTFKVAVIFGILYGYLDNHLQPLLGMQNLPLS 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 M ++ LL+ ++ D+ +Q + HLK+LRM++Q++++EFK +EG P V Sbjct: 181 QGFSLVMSILFEGLLLMGFALLLFGVVDIPYQRWEHLKELRMTKQELKEEFKNNEGRPEV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RIRQ+Q+ ARR++ VP ADVI+ NPTHY+VAL+Y+ + AP VVAKG A+ Sbjct: 241 KQRIRQIQQQFARRKIDKMVPTADVIITNPTHYAVALKYEPSLSDAPFVVAKGVDETAMH 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I+ I EN V + +PPL R++Y I Q IP QLY AVA +L +V QLK +R G+ Sbjct: 301 IQRIARENKVEIINSPPLTRSIYHTTAIEQAIPSQLYIAVAHILTYVLQLKAFRKGEGKE 360 Query: 360 PVQPTHLPVPEALDF 374 P H +P+ L Sbjct: 361 PTPLPHFSIPKHLQH 375 >UniRef50_B8FTQ2 Flagellar biosynthetic protein FlhB n=2 Tax=Desulfitobacterium hafniense RepID=B8FTQ2_DESHD Length = 350 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 114/350 (32%), Positives = 197/350 (56%), Gaps = 2/350 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KT TP R ++AR++GQ+ +S E+ S L+L+ + ++ F ++ ++S + Sbjct: 3 EKTFQATPRRRQEARKKGQVFKSTEMVSALMLVSFIGLLKFYVPTMLEKVSQIFPYVYGL 62 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + ++ L+ + + PL ++A + + +F+ + L+P+ S+ Sbjct: 63 SAEW--TARSVASLMVDLLWLGVQIVAPLFVVGAVIATGANYLQVRSLFTLEPLKPQLSR 120 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 ++ + G KRMF + EL+K++LK +G + ++ + + Sbjct: 121 ISMISGAKRMFGMKAWVELIKSLLKVTFIGYFLYATIRDNFEIFPVMARLTVGQGAMFIG 180 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 L+ + L + D +Q + + K L+MS ++++ E+KQ+EG+P +KG I++ Sbjct: 181 GLIVELGWKIALSFFVIAAIDFLYQWWDYEKNLKMSHEELKQEYKQTEGNPQLKGEIKRK 240 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 QRA + RRMM D+ ADV+V NPTHY+VAL+YD + SAP VVAKGA +A RI+++ + Sbjct: 241 QRAMSMRRMMQDLKTADVVVTNPTHYAVALRYDPKENSAPVVVAKGADEIAQRIKQLAKD 300 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 + T+E PLARAL+ AEIGQ +P LY AVAEVLA+V++LKR + G Sbjct: 301 YGIITMENKPLARALFAQAEIGQAVPADLYKAVAEVLAFVYRLKRKKFTG 350 >UniRef50_A8MHF6 Flagellar biosynthetic protein FlhB n=2 Tax=Alkaliphilus RepID=A8MHF6_ALKOO Length = 362 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 123/350 (35%), Positives = 203/350 (58%), Gaps = 2/350 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S++KTE TP +++ ARE+G + +S+E+ S LILL +I + L M A Sbjct: 11 SEEKTEQATPKKIKDAREKGNVLQSKEVNSALILLAIFIIINAFATFIGVSLLNMTRAVY 70 Query: 65 H--FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 +I + I L+ +A+ P+ ++V LIS G++ + K L Sbjct: 71 TEFLSANIAFSVKNLQILSIKLMIYFFIAVGPIALTSLVVGLISSYAQVGVLLTSKPLMF 130 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 +K+NP+ G K+MFS ++ ELLKA ++ ++G ++ ++ ++ + + Sbjct: 131 DLNKINPIEGFKKMFSMRSVVELLKAFIRLGVIGYISYDYVKGQVGVILETTGMDISSIL 190 Query: 183 GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 M + + + +I + D ++Q + + K L+MS+Q+I++E+KQ+EG+P +K + Sbjct: 191 KAIMSMTVDIGIKAGIALIALAVLDYYYQRYEYNKNLKMSKQEIKEEYKQTEGNPQIKSK 250 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 I++ QR A RRMM DVP ADVI+ NPTH+++ ++YD N+ APKV+AKG L+A I++ Sbjct: 251 IKEKQRQMAMRRMMQDVPSADVIITNPTHFAIGIKYDLNEFDAPKVIAKGQDLIAQNIKK 310 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 I ENNV +E PLARALY E+GQ +P LY AVAEVLA+V+++ Sbjct: 311 IALENNVTVVENKPLARALYDSVEVGQFVPPDLYQAVAEVLAYVYRINNR 360 >UniRef50_C5RFV5 Flagellar biosynthetic protein FlhB n=1 Tax=Clostridium cellulovorans 743B RepID=C5RFV5_CLOCL Length = 607 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 194/348 (55%), Gaps = 1/348 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +D+K+E T +L A+++GQI RS++L + L + G R+S ++ Sbjct: 261 ADEKSEEATSKKLADAKKKGQIARSKDLGLGITFLATAFGLAALGNMFIDRMSNIIMKFF 320 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + + ++ + + + + + +LP+ V++ + + + G + + + L+P Sbjct: 321 SVT-NGNLTEDGLIEILKIAMIDGAILILPIAFIVMVTGVAASLAQTGFMNTSEPLKPDL 379 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 K+NP+ G KR+FS ++ +LLK + I+VG V + +M L+ + Sbjct: 380 KKINPVDGFKRIFSMRSVVDLLKNVTIIIIVGYVGYKLVSDDIVDIMLLINLKEGAILYE 439 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +V L + L + + D +Q LK++RM++Q++++E+KQ EGDP +K + + Sbjct: 440 LKKIVTSILLKIALILSVIGIADYMYQKKKFLKEMRMTKQEVKEEYKQMEGDPEIKAKRK 499 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q + +R RMMA VP A V+V NPTH++VAL+Y+E AP VVAKG +A +I+EI Sbjct: 500 QKMKELSRARMMAAVPNATVVVTNPTHFAVALKYEEGSAGAPMVVAKGTDNIAFKIKEIA 559 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 EN VP +E PLAR +Y+ +I ++IP +Y AVAE+LA V ++K+ Sbjct: 560 KENKVPIIENKPLARLIYKEVDIDEEIPIDMYQAVAEILAMVLKMKKR 607 >UniRef50_B0TNN8 Flagellar biosynthetic protein FlhB n=7 Tax=Shewanella RepID=B0TNN8_SHEHH Length = 377 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 135/377 (35%), Positives = 224/377 (59%), Gaps = 2/377 (0%) Query: 1 MS--DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS D KTE TP +L+KARE+GQ+PRS++L S +++ ++ +A +++ Sbjct: 1 MSNKDSGQSKTEKATPQKLKKAREQGQVPRSKDLASSALIIGCSLLLTTTADWIAAKVAA 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 M + F + +++P ++ + + E + L PL V L+A+++ M GG +F+ Sbjct: 61 MTRINMSFTKAQLDEPGMMARHLAYSLLEVLNILGPLFLMVALIAMVAGAMPGGPIFNFN 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + K+S+++P+ G+ RM S ++ EL+K+ILK +L+ + FL ++ +M + Sbjct: 121 NANFKYSRIDPIAGLGRMASVKSLVELVKSILKIVLLIGIMLLFLQKNFQALMAVSQLPI 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ ++++ L + LG++ + DV +Q + H K+LRMS Q+++DE+KQ +G P Sbjct: 181 DEAVTRGIEMLSLAMFYMGLGLLVITFIDVPYQYWHHHKELRMSLQEVKDEYKQQDGKPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK +IRQMQ+ +R R VPKADV++ NP+HY+VAL+YD NK AP V+AKG +AL Sbjct: 241 VKAKIRQMQQRISRSRADVSVPKADVLLVNPSHYAVALKYDMNKADAPYVLAKGTDELAL 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +R+I N+V LE PPL RA+Y ++ QQIP L+ A+A VL +V QL+ R Sbjct: 301 YMRDIAKRNDVEVLELPPLTRAIYYSTQVEQQIPSGLFIAIAHVLTYVMQLRAARQGQQA 360 Query: 359 RPVQPTHLPVPEALDFI 375 +P H +P+ L Sbjct: 361 KPEPLPHFYIPKNLQHD 377 >UniRef50_Q6MI50 Flagella-associated protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MI50_BDEBA Length = 353 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 118/354 (33%), Positives = 200/354 (56%), Gaps = 1/354 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M++++ +K+E T R E+ R+ G + ++EL S ++LL ++ G + + + Sbjct: 1 MAEDNGEKSEEATDARREEFRKRGNVAHTKELASAVMLLAAAGGVYALGRFFFKEMYEVF 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 D + +AM+ + P++ ++ S ++ G + ++ Sbjct: 61 QHSFGDDMVKMVREGNFTEAAQYCGMKAMILIAPVLLFAGIIGAASSIVQIGFLQVEDAV 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 P F K+NP+ G KR+FS + E LK+ILK V V F L Q+ ++ S Sbjct: 121 SPNFEKVNPVEGFKRVFSMRAVVEALKSILKMGAVAMVLYFLLRSEVTQVPYMLTYSIDQ 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + +V V ++ + G D F+Q F KK+ M++Q++++E KQ EGDP +K Sbjct: 181 IIAYIGVIVVKLLGGVGAVMLVIAGADYFYQRFDLEKKMMMTKQEVKEEHKQREGDPMIK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIR++QR A +RMM+++PKADV++ NPTH +V L+Y + + AP++VA GA VA +I Sbjct: 241 SRIRRIQREMASKRMMSEIPKADVVITNPTHIAVVLKY-TDNLPAPQIVAMGADHVAEKI 299 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 +EI ENNVP +E PLAR +++ +IGQ IP +L+ AVAEVL++V++L+R + Sbjct: 300 KEIARENNVPIVENKPLARTIFKTLKIGQVIPRELFVAVAEVLSYVYRLRRKKR 353 >UniRef50_C0C1N4 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1N4_9CLOT Length = 353 Score = 402 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 115/355 (32%), Positives = 197/355 (55%), Gaps = 3/355 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ +S KTE TP + R+EG I +S ++ +++ + + ++ + + Sbjct: 1 MAADS--KTEKATPKKRRDERKEGNIFQSSDVVNVVFVFLSFYILKLIFPGIYETSGNFM 58 Query: 61 SAGLHFDHSI-INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + SI + + + A +LP ++ ++ + +F+ K+ Sbjct: 59 KRFISLAGSITDLSGQSVGKYGMEFLSAAARTVLPFACICMVTGIVMHGIQTRFLFTSKN 118 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 +PK ++++PL GIKR+F+ + EL+K +LK I++ ++ L ++R M S Sbjct: 119 FRPKLNRISPLQGIKRIFALKNAIELVKNLLKVIVLVAIIYTLLKQDAVNVIRTMDMSIS 178 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + D++ L V + + D FQ + + +K++MS+Q++++EFKQ+EG+P + Sbjct: 179 ASAAYTFDMIISMILRVSMVFAVIAFLDYLFQWWDYERKIKMSKQEVKEEFKQTEGNPEI 238 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR +Q+ AR RMM VP ADVI+ NPTH++VAL YD K +AP VVAKG +ALR Sbjct: 239 KGRIRDIQKQRARSRMMQAVPNADVIIRNPTHFAVALSYDTEKNNAPVVVAKGVDELALR 298 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 I G EN+V +E PLAR+LY E+ ++IP + Y AVAE+L +V++L + Sbjct: 299 IVRTGEENHVAVIEDRPLARSLYAETELNREIPSEYYGAVAEILVYVYKLNKKMR 353 >UniRef50_A7FED7 Flagellar biosynthetic protein FlhB n=25 Tax=Enterobacteriaceae RepID=A7FED7_YERP3 Length = 377 Score = 402 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 126/378 (33%), Positives = 202/378 (53%), Gaps = 3/378 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ S +K+E PT +L KAR++G IPRS+++T L+ ++ + L Sbjct: 1 MSNSSGEKSEKPTTGKLSKARKKGDIPRSKDVTMAAGLVTSFILLSLFLPY-YKELISQS 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + S +ND + ++ + L + + L ++++ ++ GG F+ L Sbjct: 60 FVSVSQLASQLNDQGALEQFLLANLFIFAKFLA-TLVPIPLFSMLATLIPGGWNFTPVKL 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 P KL+PL GIKR+FSA G E+LK + K +V + ++ L Sbjct: 119 IPDLKKLSPLAGIKRIFSASNGTEVLKMLAKCSIVLYTLYLVVHSSLDDLLHLQTLPLEE 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ L + V+ D+ KK++M++Q+++ E K ++G+P +K Sbjct: 179 AITQGFAQYHHILLYFIAIVVVFAIIDIPLSHHLFTKKMKMTKQEVKQEHKNNDGNPEIK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R+RQ+QR A ++ VP ADVI+ NPTH+SVAL+Y K SAP +VAKG +AL I Sbjct: 239 SRVRQLQRQYAIGQINKTVPSADVIITNPTHFSVALKYAPEKASAPYIVAKGKDDIALYI 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 R I ++ + +E PPLARA+Y ++ QQIP QLY A+A+VL +V Q+K WR +P Sbjct: 299 RSIAQKHKIEIVEFPPLARAIYHTTKVNQQIPAQLYRAIAQVLTYVMQIKSWRSGQASKP 358 Query: 361 VQPTHLPVPEAL-DFINE 377 V THL +P+ + F +E Sbjct: 359 VLNTHLGLPKEMQRFHDE 376 >UniRef50_B8CVM2 Flagellar biosynthetic protein FlhB n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CVM2_SHEPW Length = 393 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 129/377 (34%), Positives = 220/377 (58%), Gaps = 2/377 (0%) Query: 1 MS--DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS D KTE TP +L+KA+ EGQ+PRS++L S +++ ++ +A +++ Sbjct: 17 MSNKDSGQSKTEQATPQKLKKAKSEGQVPRSKDLASSALIIGCSLMLTTSADWIAAKVAK 76 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 M + F + +++P +++ + + E + L PL V L+A+++ M GG +F+ K Sbjct: 77 MTRTNMSFTKAQLDEPGMMMRHLGQSLLEVLNILGPLFLMVALIAMVAGAMPGGPIFNFK 136 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + K+S+++P+ GI RM S ++ EL+K+ILK +L+ + FL + ++ Sbjct: 137 NAAFKYSRIDPIAGIGRMASVKSLVELVKSILKIVLLMGIMWLFLEKNLQTLLSFNQLPV 196 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ ++++ L + LG++ + DV +Q + H +L+MS Q+++DE KQ +G P Sbjct: 197 DEAVSKGIEMLSLGMFFLGLGLLLITFIDVPYQYWHHHNELKMSLQEVKDEHKQQDGKPE 256 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K +IRQMQ+ +R R VPKADV++ NPTHY+VAL+YD +K AP V+ KG +AL Sbjct: 257 IKAKIRQMQQRISRSRADISVPKADVLLVNPTHYAVALKYDIDKADAPYVLTKGTDELAL 316 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +RE+ ++V +E PPL RA+Y ++ QQIP L+ A+A VL +V Q+K R Sbjct: 317 HMREVAKRHDVEVIELPPLTRAIYYSTKVDQQIPAALFIAIAHVLTYVLQIKAARQGKQA 376 Query: 359 RPVQPTHLPVPEALDFI 375 +P H +P+ L Sbjct: 377 QPEPLPHFFIPKNLRHD 393 >UniRef50_Q67K27 Flagellar biosynthesis protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K27_SYMTH Length = 361 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 123/354 (34%), Positives = 202/354 (57%), Gaps = 1/354 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 ++TE PTP RL+KAREEG++ RS +L + L L+ + G ++++G + Sbjct: 8 ERTEEPTPRRLQKAREEGRVARSTDLVAGLGLVAATLALRGLGGYSVQQVTGGMVGAFET 67 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + P + + A+LP+ VV + +++ + +F+ ++L P+F+ Sbjct: 68 LRPLELTPETTAAVMQDWALIGLRAVLPIALVVVAIGVVAGTLQTRFIFTLRALVPRFAT 127 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LNP+ G+ R+FS +T EL+K ++K +G + + PQ L+A++ + Sbjct: 128 LNPITGLTRIFSLRTVTELVKGLIKLAAIGYIAYRSVRGLVPQFPNLIAQTVPAGLSAIA 187 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 D+V L V L + + D +Q + + +RM++Q+++ E ++ EG P +K R RQ Sbjct: 188 DMVLDVMLAVGLAYLVVGVLDYGYQYWEFRRSMRMTKQEVKQEHREQEGAPELKSRQRQR 247 Query: 247 QRAAA-RRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGA 305 R A RRR + +VP ADV+V NPTH++VAL+Y+ K AP+VVAKGA L+AL I++I Sbjct: 248 MRELAMRRRALKEVPGADVVVTNPTHFAVALKYEAAKDEAPRVVAKGADLLALEIQKIAR 307 Query: 306 ENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 ++VP +E LAR LY E+G+ IP + Y AVAEVLA+V+ L+R GQ Sbjct: 308 AHDVPLVENRTLARGLYYDVEVGRLIPPEYYQAVAEVLAFVYNLRRQSRQAGQE 361 >UniRef50_Q1YV76 Flagellar biosynthetic protein FlhB n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YV76_9GAMM Length = 382 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 126/379 (33%), Positives = 216/379 (56%), Gaps = 4/379 (1%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MSD S+++ E PT RLEK RE+GQ+ RS+EL +++ ++ G + L+ Sbjct: 1 MSDKDSSEEREEEPTAKRLEKGREDGQVARSQELGVAAMMIGVAFFLYLFGSYIIADLTK 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + ++G FD + D +L++ + + + ++P+ V++A+ S ++GG +FS K Sbjct: 61 VFASGFTFDRKAVFDTSLLVPAFGIQAVNSFIVVVPIFVLAVIIAIASAGIMGGYIFSLK 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 SL PK SK+NP+ G+KRMF + +L KA+ K L+ V + ++P + +L Sbjct: 121 SLAPKASKINPMAGLKRMFGMKAVVDLSKALSKFALIALVLYLVVSANFPMLTKLGFMDL 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 AM A ++ +LV L +I D+ +Q+ + K+++M++Q++++E K +EG P Sbjct: 181 EPAMAEAGRIIAFGTVLVTLTLIVAAAIDIPYQLHTFNKQMKMTKQEVKEEMKDTEGRPE 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK +IR+ QR A MM+ + ADV++ NP H++VAL YD +K AP +VAKGA L+A Sbjct: 241 VKAQIRRKQREIATGMMMSAIADADVVIVNPEHFAVALSYDPSKNGAPIMVAKGADLLAK 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 IRE E +P +P LAR+++ EI Q +P LY AVA+V+A+++ L + Sbjct: 301 AIRERAKEEGIPLFSSPVLARSIFYTTEINQSVPESLYYAVAQVIAYIFNLNSFERGAQT 360 Query: 359 RPVQPTHLPVPEALDFINE 377 + VP+ + + + Sbjct: 361 AKK--PNPKVPDDMRYNAD 377 >UniRef50_D1B6A6 Flagellar biosynthetic protein FlhB n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6A6_THEAS Length = 366 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 135/353 (38%), Positives = 207/353 (58%), Gaps = 1/353 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +++KTE TP + KAREEGQ+ +S++LT+ +++ G+ + G RRL + + + Sbjct: 14 AEEKTEPATPRKRRKAREEGQVTKSQDLTAAVVIASGLLGVLVFGGFFFRRLQLLFAQVM 73 Query: 65 HFDHSIINDPNLILGQ-IILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 + L + +L PL L AL GL+ + K L P Sbjct: 74 GYLKDPSMGGEEWLLLPFSRALGSYLLIWFPLGLACALAALGLMAYQVGLMITPKPLVPN 133 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG 183 +++NP+ G+K+MFS ++ E+LK +LK +++ + L ++ + + +G Sbjct: 134 LNRMNPVSGMKKMFSGRSFVEMLKGVLKALILLLMLYGALRKDLLTLLGAIGQPFGEGLG 193 Query: 184 NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRI 243 M V + + + L ++ + FD +Q + + +RMS+Q+I++E+KQ EGDP VK RI Sbjct: 194 LVMWRVWVLCMKMTLMLMVLGLFDYAYQRWEFERSIRMSKQEIKEEYKQMEGDPLVKRRI 253 Query: 244 RQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREI 303 RQ QR ARRRMM+DVPKADV++ NPTH +VAL YD AP V+AKG GL+A RIREI Sbjct: 254 RQRQRELARRRMMSDVPKADVVITNPTHVAVALSYDRKVAEAPVVLAKGKGLIAQRIREI 313 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 EN VP ++ PPLARA+Y E+G++IP LY AVAEVLA+V++L+ G Sbjct: 314 ARENRVPVVQNPPLARAIYAQVEVGEEIPESLYKAVAEVLAFVYRLRGGARRG 366 >UniRef50_B0MPC8 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPC8_9FIRM Length = 353 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 116/354 (32%), Positives = 204/354 (57%), Gaps = 3/354 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ ++KTE TP + + R++G++ +S+E+ + ++ + + G + + L + Sbjct: 1 MA--GEEKTEKATPKKRKDTRKKGEVLQSKEVAVAVFVVGIFAFLAIFGNYMFQMLLNFM 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + N + + + + P+++ V+++++ ++ +FS +++ Sbjct: 59 EQSMSSIDKTGNTVEFAMSVFWKVAIICICTVGPILAVGVVLSVLPVIVQTKGLFSMEAM 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PKFS+LNP GIKR+FS Q L+K +++ I+V ++ F + + +L+ I Sbjct: 119 KPKFSRLNPFTGIKRLFSMQALVGLVKGLIEIIVVVAILYFQVMDRINEFKKLIDTDVIK 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + + + ++ + D FQ +S KKL+MS+Q+++DE+KQ EGDP +K Sbjct: 179 IVAYISETAMSLIVTIFVMLVFVAAADYVFQWWSFEKKLKMSKQEVKDEYKQLEGDPQIK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKM-SAPKVVAKGAGLVALR 299 G+I++ Q+ A++RMM +VP ADV+V NPTHY+VAL+YD AP VVAKG +ALR Sbjct: 239 GKIKRKQQEMAQQRMMQEVPSADVVVRNPTHYAVALKYDRKTAYRAPVVVAKGTDALALR 298 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 I + E+NV E PLAR LY +IGQ+IP + Y AVAEVLA V++ + R Sbjct: 299 IVAVAQEHNVYITENRPLARGLYEAVDIGQEIPREFYTAVAEVLAMVYEEQHKR 352 >UniRef50_B2SN53 Flagellar biosynthetic protein FlhB n=14 Tax=Xanthomonadaceae RepID=B2SN53_XANOP Length = 376 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 143/363 (39%), Positives = 226/363 (62%), Gaps = 2/363 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S++ ++TE PT RL +ARE+G IP+SREL++ + GV + + + + Sbjct: 4 SEDGGERTELPTEKRLREAREQGNIPQSRELSTAAVFGAGVFALMALARGIGDGATAWME 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 L D ++ +P + G L+ + + +LPLI + L P+++ GL FSGK++ Sbjct: 64 TALSPDPTMRENPMALFGHFGDLLLQLLWVMLPLIGICLAAGLAGPLLMSGLHFSGKAIM 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 P +KLNP G+KRM+ + + AEL+K++L+ + VG F + P + L+++ A Sbjct: 124 PDLTKLNPANGLKRMWGSNSLAELVKSVLRLLFVGLAASFCISKSLPGLRSLVSQPLEQA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 +GN +D ++ + D +Q ++ ++KL+M+R++I+ E K+SEG P VKG Sbjct: 184 VGNGLDFTKSLLFYTAGALVLLAAIDAPYQKWNWMRKLKMTREEIKREMKESEGSPEVKG 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 RIRQMQ ++R+MM VPKADV++ NPTHY+VAL+Y+ KM AP VVAKG +A RIR Sbjct: 244 RIRQMQMQMSQRQMMEAVPKADVVLMNPTHYAVALKYEGGKMRAPIVVAKGVDEMAFRIR 303 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 E G ++ V + APPLARALYR A++G++IP +LY+ VA+VL++V+QL+ W GG P Sbjct: 304 EAGEQHRVAIVTAPPLARALYREAQVGKEIPVRLYSVVAQVLSYVYQLRGW--NGGPMPE 361 Query: 362 QPT 364 P+ Sbjct: 362 LPS 364 >UniRef50_P57334 Flagellar biosynthetic protein flhB n=4 Tax=Buchnera aphidicola RepID=FLHB_BUCAI Length = 383 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 156/380 (41%), Positives = 253/380 (66%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 + +++KTE PT HR+ K R++G+ SREL+SL ILLVG +W+ + S ++S Sbjct: 4 NTNEEKTEHPTEHRIRKFRKKGKTRYSRELSSLFILLVGFINLWWYRDLIVLNFSKIMSD 63 Query: 63 GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 F+ + + N L +I++ ++E + + P + +++V +I P++ G+ + +SL Sbjct: 64 SFLFESNDFLNNNNNLLKILMSLKEILFSFFPFLISLLIVIIIPPILFSGISLNFRSLTL 123 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 FSKLNP G KR+FS Q E K ILK +V ++ ++L + +++ L+ + ++++ Sbjct: 124 NFSKLNPFHGFKRLFSFQIIVEFFKIILKLFIVSIISFWYLQFSFSEILFLVNANYVSSL 183 Query: 183 GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 + +++ C LV+LG+ P+V FD+ +Q F++ KKL+M+RQ++RDE K+ EG+P++K R Sbjct: 184 SHGYNIIFSCCFLVILGLFPIVFFDIAWQQFNYYKKLKMTRQEMRDELKEKEGNPNIKMR 243 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 IRQ +A RRRM+ + PKADVI+ NP HYSVAL+YDE M+APKV+AKG G A++I+ Sbjct: 244 IRQAMKAVMRRRMIINTPKADVIITNPIHYSVALKYDEKNMNAPKVIAKGIGEAAIKIQN 303 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQ 362 + ++N+ + P LAR+LYR++EIGQ IPG LY AVAEVLAWVW++++W+ GG P + Sbjct: 304 LALKHNISIISVPSLARSLYRYSEIGQYIPGPLYKAVAEVLAWVWKVRKWKKEGGIFPEK 363 Query: 363 PTHLPVPEALDFINEKPTHE 382 P ++ VP L F E T++ Sbjct: 364 PINISVPSELTFTGEHETND 383 >UniRef50_C1ZJL2 Flagellar biosynthetic protein FlhB n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJL2_PLALI Length = 360 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 120/357 (33%), Positives = 201/357 (56%), Gaps = 1/357 (0%) Query: 1 MSDE-SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++ S DKTE PT R +ARE+G + +S++LT+ ++L V+W+ G ++A ++ + Sbjct: 1 MAEDESGDKTEDPTERRRSEAREQGNVVKSQDLTAAALMLGSAGVLWWHGRNVAEYMARL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + L D N ++ + E+ + PL+ + L A+ ++ G +FS + Sbjct: 61 MRNSLSAAPWTTFDQNDLVSLAWAHLGESGWQVAPLLILLALAAIAINLLQVGFLFSPEV 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 LQPK+ ++NPL GI+R+FS + A L + K L+GSV +F++ + L + Sbjct: 121 LQPKWERINPLSGIQRLFSITSVARLGANLAKLALLGSVATWFVYDGLHRFAALAHQPLT 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A + + L + D FQ + + + L+MS+Q+IRDE+K+ +GDP + Sbjct: 181 VVAVVAGSELISLIFWMALAIFVAALADFAFQWWKYEQDLKMSKQEIRDEYKEMDGDPLI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 + R R+ R + R + V ADV++ NPT ++A++YD M AP VVAKGAG +A + Sbjct: 241 RMRRREAHRKLTQGRELQSVKTADVVITNPTEIAIAIKYDVATMPAPIVVAKGAGELAAQ 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 IR + AEN VP +E P+ARALY+ +G IP LYA AE+LA+V+++ + Sbjct: 301 IRRLAAENGVPIIERKPVARALYKLTRVGDPIPSDLYAVFAEILAYVYKITGRKPPR 357 >UniRef50_C1DW37 Flagellar biosynthetic protein FlhB n=3 Tax=Sulfurihydrogenibium RepID=C1DW37_SULAA Length = 352 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 124/353 (35%), Positives = 203/353 (57%), Gaps = 2/353 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ + KTE TP R +KAREEGQ+ +S ++ L L V V+ F L + L G Sbjct: 1 MAKDPR-KTEKATPKRRQKAREEGQVLKSTDVAVALSLFVVFLVMIFYIPFLYKYLLGYF 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 +I + + I + + +LP +S + +V +++ V G +F+ K L Sbjct: 60 KYTFSNPFYLIPEESG-KNFIWFTFKVLAILILPFVSILFIVGIVANVAQFGFLFTLKPL 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK SK+NP+ G++R+FS T EL+K+ILK L V+ F + + + M + + Sbjct: 119 TPKLSKINPISGLQRLFSLSTLFELVKSILKLSLALFVSYFLVSYLLDGFLVYMTANINS 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + + IP+ D F++ + + + L+M++ ++++E K EG+P VK Sbjct: 179 QIYILAKTIIILIMAFTFLSIPIAIADFFYRRYEYEENLKMTKDEVKEERKSYEGNPIVK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 IR+ R A +RM+A+VPKADV++ NP HY+VAL+Y++ KM AP+V+AKG L+AL+I Sbjct: 239 KEIRKRMRQLALKRMIAEVPKADVVITNPDHYAVALKYEKGKMKAPQVIAKGQDLIALKI 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +E+ E+NV +E PPLAR+LY E+G IP Y AVA++LA +++ K Sbjct: 299 KEVAKEHNVKIVEDPPLARSLYSSCEVGDYIPEDFYEAVAKILAVIYKQKAKM 351 >UniRef50_Q2NX25 Flagellar biosynthetic protein FlhB n=7 Tax=Enterobacteriaceae RepID=Q2NX25_SODGM Length = 387 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 198/374 (52%), Positives = 272/374 (72%), Gaps = 1/374 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M++ESD +K+EAPTPHRL+KAR+EGQ+PRS+EL S L+LL G S++W G LA+ + M Sbjct: 1 MAEESDLEKSEAPTPHRLQKARKEGQVPRSKELVSWLMLLSGWSLLWLAGGHLAQGMGLM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L +GL F I D + +L Q L+R+A+LA PLI GV LVA +P+++GG++FS K+ Sbjct: 61 LESGLTFSFHINGDRHWLLAQFSGLVRQALLACAPLILGVTLVAAGAPMLIGGVMFSSKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + +LNP G+KR+FS Q AE +K + K LVG G LW WP+M +L +P Sbjct: 121 VSLDLKRLNPFSGLKRLFSMQMIAEFIKTLFKVCLVGGACGTALWFVWPRMTQLAQGAPH 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 M ++ L+ C L+++L +IP+VGFD+ +Q+FSH+KKLRMSR DIR+E+K+ EGDP + Sbjct: 181 RVMAESLSLISQCVLVIILALIPVVGFDILYQLFSHMKKLRMSRHDIREEYKEQEGDPQL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K IRQ QR A++RMM DV KADV++ NPTHY+VAL+Y++ +M+ P+++AKGAG VAL Sbjct: 241 KSLIRQRQRQQAQQRMMQDVAKADVVILNPTHYAVALKYEQMRMTTPRLLAKGAGAVALN 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IR+ ++ +PTL APPLARAL+RH EIG IP LY AVAEVLAWV+ L+RWR GG R Sbjct: 301 IRQRAEQHRIPTLVAPPLARALFRHCEIGSAIPVALYGAVAEVLAWVYGLRRWRKQGGLR 360 Query: 360 PVQPTHLPVPEALD 373 P QP +L VP+A+D Sbjct: 361 PRQPGNLTVPKAMD 374 >UniRef50_A4XIZ4 Flagellar biosynthetic protein FlhB n=2 Tax=Clostridia RepID=A4XIZ4_CALS8 Length = 366 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 114/347 (32%), Positives = 189/347 (54%) Query: 8 KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFD 67 KTE TP + ++AR+ G + +SRE+TS LL+ V + FG L Sbjct: 16 KTEKATPRKRQEARKRGMVAKSREVTSAFALLISVLFLKFGYSLFVHPLQSYGKYFFGNL 75 Query: 68 HSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKL 127 + I D +I + +LP ++ + + G + + +SL+ F K+ Sbjct: 76 NYNIEDIADASRLFSAIITITLKLVLPFCIVIMFMTALVEWAQSGFLITSESLKVSFQKI 135 Query: 128 NPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMD 187 NP+ G KR+FS + EL+K+ILK +++G +++ + S I+ + + D Sbjct: 136 NPIEGFKRIFSINSVVELIKSILKILIIGYTGYLSTKTFAGKLLEMYDMSLISIVKFSFD 195 Query: 188 LVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQ 247 L + + + D FQ + KKL M+++++++EFKQ+EG+P +K RIR+ Q Sbjct: 196 STINLILWMSIMFFGIAVIDFIFQRQQYEKKLMMTKEEVKEEFKQTEGNPQIKSRIRERQ 255 Query: 248 RAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAEN 307 R + +RM +PKADV++ NPTHY+VAL Y+ K AP+V+AKG +A +I+E + Sbjct: 256 RRISLQRMFQQLPKADVVITNPTHYAVALLYEPEKFDAPRVIAKGKDYIAQKIKEEAKKY 315 Query: 308 NVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 + +E LA++LY E+G IP +LY AVAEVLA+V+ LK ++ Sbjct: 316 KIEIVENKELAQSLYNMCEVGDFIPPELYHAVAEVLAYVYSLKNYQK 362 >UniRef50_A2SKE1 Flagellar biosynthesis protein n=2 Tax=Burkholderiales Genera incertae sedis RepID=A2SKE1_METPP Length = 387 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 145/382 (37%), Positives = 233/382 (60%), Gaps = 1/382 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D+ D+ + +L+KARE+GQ+PRSR+L + G++++ + ++ + Sbjct: 1 MADQGAQDRNLPASERKLKKAREDGQVPRSRDLGHFAAVAAGIALLAAMAPTATGWMTRL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L +GL FD +N + ++ L + A+LP+ + +VL AL S + +GG F+ K+ Sbjct: 61 LQSGLRFDAGTLNGTASMSERLAELGVQFAWAMLPIGAVMVLAALASSLTVGGWNFTLKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++PKFSKLNPL G+ RM SA + +++ + +++G V F+L + Q + Sbjct: 121 IEPKFSKLNPLTGLPRMLSADRLVDTVRSCVLALVIGLVGAFYLSQNVFQFTSTLTLPLP 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 TA+ A + V + ++L + DV Q F H K+L+MS Q+++ E K++EG+ V Sbjct: 181 TALAQAGNDVLYGLMFLLLALAVFALIDVPLQRFQHAKRLKMSHQEMKQEHKENEGNVEV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +++ R A RRM+A VPKAD++V NPTHY+VAL+Y+E + AP+VVAKGA L+A+R Sbjct: 241 KAKVKARMREMANRRMLAAVPKADLVVMNPTHYAVALKYEEGRGGAPRVVAKGADLMAMR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IR++ ++ VP L+AP LARALY HAE+ ++IP LY AVA+VLA+V+QL+ Sbjct: 301 IRDLAKDSKVPVLQAPVLARALYAHAELDREIPIALYTAVAQVLAYVYQLRAALAGKAPL 360 Query: 360 PVQPTHLPVPEALDFINEKPTH 381 P + LPVP LD N+ + Sbjct: 361 PGELPELPVPAELDPHNKPSSD 382 >UniRef50_Q316G6 Flagellar biosynthetic protein FlhB n=7 Tax=Desulfovibrionales RepID=Q316G6_DESDG Length = 357 Score = 396 bits (1018), Expect = e-109, Method: Composition-based stats. Identities = 114/357 (31%), Positives = 191/357 (53%), Gaps = 1/357 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M + +TE TP R KAR EG +P+S+E+ + + G ++ +A + G+ Sbjct: 1 MPQQDPSRTEQATPKRRRKARGEGNVPKSQEVPKTFVTMAGTIALYVYMDHIASEMMGLY 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 P + ++ + + L LLP++ + LVA + + G +++ K Sbjct: 61 EHFFRNAVMFEATPQAVYDLLLWISGKLALMLLPIMLFLALVAYVVIRLQVGKLWAPKVF 120 Query: 121 QPKFSKLNPLPGIKRMF-SAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 +PKF++ N + G+KR+F S QT L K+IL ++G + + + L +P Sbjct: 121 KPKFARFNLIKGLKRLFISPQTLIRLGKSILMAAVIGIAPYIVIRNEMHHFLPLFYATPT 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 +++ +L ++ + D+++ + + + L+M++ +++DE KQ+EGDP V Sbjct: 181 AIGVYMLEMGMKMVKYAMLPMLVIAIADLWYTRWDYEENLKMTKDEVKDERKQAEGDPAV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K + RQ +RM+ +VPKADV+V NPTHY+VAL+YD + AP V+AKG +A R Sbjct: 241 KAQQRQKMMEVMAQRMLENVPKADVVVTNPTHYAVALRYDAVEAPAPVVLAKGVDHLAER 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 I+E+ E+ VP E PLARALYR E+G IP +LY AVA +LA + + K Sbjct: 301 IKEVAREHRVPIRENVPLARALYRQVEVGDMIPEELYQAVASLLASLMKFKARPQGR 357 >UniRef50_A8F4V6 Flagellar biosynthetic protein FlhB n=1 Tax=Thermotoga lettingae TMO RepID=A8F4V6_THELT Length = 376 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 191/344 (55%), Gaps = 2/344 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PTP R KAREEGQ+ S EL + LV V V+ F L L Sbjct: 35 EKTEKPTPRRRRKAREEGQVATSNELNMAVTFLVAVFVMRFIFQRLIMFLENGSILFFSL 94 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + + + + G+I ++ + L+ L +++ + + M + S K L+ + Sbjct: 95 EENDFLN--NLSGRIYQSFKDTIFLLVLLFLSLIISVIFAGAMQTKFLLSFKPLKMDLKR 152 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 +NP+ G KR FS ++ ELLK+ILK ++VG V + +W + ++ Sbjct: 153 INPVEGFKRFFSMRSLFELLKSILKMVIVGFVAYSVIRSNWILFRFYSDMETVDSLKLIF 212 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 +L L + + + D F+Q + K +RM++Q+I++E+++ EG P V+ R R++ Sbjct: 213 NLTYEVMLKCAIALFILAIVDYFYQRWEFEKSIRMTKQEIKEEYREIEGSPEVRRRQREI 272 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 AR RM+ VP+ADV++ NP+H +VA++Y +M AP V+AKGA +A +I +I E Sbjct: 273 MARLARGRMLQQVPEADVVITNPSHIAVAIEYKSEEMEAPVVLAKGADEIAQKIIQIAKE 332 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 NN+P + P +AR LY+ +IG+QIP +Y AVAE+LA+V+ L+ Sbjct: 333 NNIPVVRNPQVARELYKTTDIGEQIPPNMYRAVAEILAYVYSLR 376 >UniRef50_B5YIY9 Flagellar biosynthetic protein FlhB n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIY9_THEYD Length = 353 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 130/355 (36%), Positives = 202/355 (56%), Gaps = 2/355 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M +E ++TE TP R EKAR++G++PRSRELT ++ + F G L + + Sbjct: 1 MPEELQERTEQATPRRREKARQKGEVPRSRELTGIIGTWMIFLYFVFSGTFLISIMQH-M 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + + I+ I I+ + LP+ ++ L+ + G +F+G +L Sbjct: 60 KEAFTRVKNPEFVASAIITIIKDEIKWYFIQFLPIGGVLLFGVLLVHFIQTGFLFTGATL 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 P SK++PL GIK++FS E +K ILK + +G V F L + L+ Sbjct: 120 VPDVSKISPLKGIKKLFSLNALFETIKGILKLVALGIVIYFVLKKDVNILPLLIDMDVKA 179 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 G + + L ++ + G D +Q + + + LRM++Q+I++EFK++EG P V+ Sbjct: 180 IAGISFQKIYQLILACLIMLTVFAGIDFAYQRWQYERNLRMTKQEIKEEFKETEGSPMVR 239 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIR +QR AR+RMM +VPKADV++ NP H +V ++YD M+AP VVAKGA L+A RI Sbjct: 240 ARIRSLQREMARKRMMQEVPKADVVITNPLHLAVCIKYDSKNMNAPAVVAKGANLLAERI 299 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 +EI + VP E PLARALYR +G++IP LY AVA +LA V+++K ++A Sbjct: 300 KEIARASGVPIYENKPLARALYR-IPLGEEIPEALYKAVATILATVYKIKGRQIA 353 >UniRef50_C2ED97 Flagellar biosynthesis protein FlhB n=5 Tax=Lactobacillales RepID=C2ED97_9LACO Length = 355 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 109/353 (30%), Positives = 183/353 (51%), Gaps = 1/353 (0%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 + D KTE PTP R+ +R+ G++ +S ++ + + L V + S Sbjct: 3 DKDGKTEKPTPKRIRDSRKRGEVAKSPDVVAAVALFVFAMLFVPLCEFSINHFSPYFVNY 62 Query: 64 LHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 L + + I + P + +++ ++ ++ GL+F+ L+P Sbjct: 63 LEMLANPDQMIGSLGKIAFQAILMIFIMTGPFMLIAIVIGIVGNIVQVGLLFTATPLKPD 122 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG 183 F KLNPL G+K+MFS + L K+++K I+VG + P + L + Sbjct: 123 FKKLNPLNGLKQMFSLRALQNLAKSLVKLIIVGYLCYKKYVETIPTLTSLSEVGTGKVLL 182 Query: 184 NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRI 243 +++ A + + ++ + FD FQ ++H+K L+MS+Q+I+DE KQ EGDP VK + Sbjct: 183 FMLNICKDLATQIGILLVVVSVFDYAFQRYTHMKSLKMSKQEIKDEMKQMEGDPQVKAQR 242 Query: 244 RQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREI 303 + R R +A V A V++ NPTH ++A++YD P+V+AKGA VA+RI+E Sbjct: 243 KAKHREMIRN-AVAQVKDATVVLANPTHLAIAIKYDAEGAGVPQVLAKGADDVAMRIKEE 301 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 + NVP +E PLARALY + G IP + Y A+AEV+A V++L++ Sbjct: 302 AKKQNVPIIENKPLARALYPKVDAGDFIPVEFYEAIAEVIALVYKLEQEAKGK 354 >UniRef50_B0THC3 Flagellar biosynthetic protein flhb, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THC3_HELMI Length = 362 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 124/350 (35%), Positives = 206/350 (58%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +KTE PT R +AR++GQ+ +S+E+ + LILL G + GV + M+ L Sbjct: 13 AGEKTEKPTAKRRSEARKKGQVAKSQEVNTALILLFGFLALRSLGVQTMDGMERMMVYLL 72 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 P ++ + ML + P + + L++ + G +FS + L+ + Sbjct: 73 GTVTLEEVTPVSVITTGTTIAIRTMLMIAPFMLAAMAAGLLASYLQVGFLFSSEGLKMNW 132 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLN + G+K +FS+++ EL+K++LK ++ V + H +L+ TA+ Sbjct: 133 GKLNVIAGLKNIFSSRSLVELVKSLLKVSVISYVAYSAVVKHLHLFPKLLGMDVQTAVAA 192 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 ++ V + ++ + D +Q + H + L+MS+Q+++DEFKQ+EGDP +K +I+ Sbjct: 193 ISEVAYDVGFRVAVLLLLVAALDYGYQWYKHEESLKMSKQEVKDEFKQAEGDPQIKSKIK 252 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q R A RRMM ++PKADV++ NPTH++VAL+Y+ M+AP V+AKG VAL+IR + Sbjct: 253 QRMREMAMRRMMQELPKADVVITNPTHFAVALKYESGSMTAPVVIAKGQDYVALKIRAVA 312 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 ++ +P +E PLAR LYR EIGQ+IP +L+ AVAEV A+V++LK+ R Sbjct: 313 QDHGIPLVEDKPLARTLYRAVEIGQEIPAELFQAVAEVFAFVYRLKKKRA 362 >UniRef50_B3EAW0 Flagellar biosynthetic protein FlhB n=8 Tax=Desulfuromonadales RepID=B3EAW0_GEOLS Length = 357 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 114/355 (32%), Positives = 191/355 (53%), Gaps = 4/355 (1%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+++ D KTE PT RLEKARE+G P S+ L+ LL G+ V++ G L L Sbjct: 1 MAEDDDKHSKTEQPTGRRLEKAREKGAPPSSQMLSQSFTLLAGIVVLYLLGSYLMNGLKS 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVML--GGLVFS 116 + + ++ + + L P+I V+ +++ ++ G L F Sbjct: 61 TTVQVYSQIGTFELTEQNVYTMMLRIFGVLFMLLAPVILAVMSTGILAHIVQDNGRLDFQ 120 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 + SKLN + G ++F+ + E+LK+++K ++G + L + L Sbjct: 121 WGRITFDISKLNFISGFGKLFNKEALVEILKSLIKIFVIGWIAYQVLRDELQNITVLAES 180 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 + + +I + D+ + + +++ L+M++Q+++DE K EG+ Sbjct: 181 DVNGILSYTGHVAFKIVTHTCGIMIVISILDMAYVKWRYIENLKMTKQEVKDETKDMEGN 240 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P +KG+I+++Q AARRR+ +P ADV++ NPTH++VAL+YD ++M AP V+AKGA + Sbjct: 241 PEIKGKIKRLQFQAARRRLTKIIPTADVVITNPTHFAVALKYDRSRMVAPMVIAKGADEM 300 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 AL I+E+ E+ V +E LAR LY Q+IP LYAAVAEVLA+V++LK Sbjct: 301 ALAIKEMAREHKVTLVENRFLARELYDQVAENQEIPESLYAAVAEVLAYVYRLKG 355 >UniRef50_Q1D9K3 FlhB/HrpN/YscU/SpaS family protein n=3 Tax=Cystobacterineae RepID=Q1D9K3_MYXXD Length = 359 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 122/355 (34%), Positives = 199/355 (56%), Gaps = 1/355 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSDES +KTE P+ +L+ +R++GQ+ +S++L+ + +LLVG++ + L L+ + Sbjct: 1 MSDESGEKTEEPSQKKLDDSRKKGQVWKSKDLSGVGVLLVGLAAVKGSWDMLETELTSLF 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + ++ + L +R +L LP+++G +V + + G +F+ L Sbjct: 61 LFSFDHLTNPVDLSVATGQLLFLGLRAVVLVSLPVLAGGAIVGGLMEYLQVGTLFTMDPL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK KLNP+ G+K +F+ + ELLK ++K + V + P + + + Sbjct: 121 IPKMEKLNPIQGMKNLFNKKAIVELLKNLIKISVTAYVVYGVVRDSMPMVAETLRQDTRG 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 M +LV A V L + FDV++Q S +K + M++++++ E+KQSEGDPH K Sbjct: 181 IMAIMGELVTRVATRVALLFVLFGVFDVWWQRKSFMKDMMMTKEEVKKEYKQSEGDPHHK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 + ++M + M V +ADVIV NP H +VAL+YD K AP+V+A+G A RI Sbjct: 241 AKRKEMHQEIMEGAQMEAVREADVIVTNPDHVAVALKYDREKDGAPRVLARGIDFKAERI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 + I E +VPTL PLA AL R E+G ++P +LY AVAEVL +V+ LK + A Sbjct: 301 KAIAREQDVPTLRNVPLAHALLR-VEVGHEVPEELYDAVAEVLNFVYGLKSGQPA 354 >UniRef50_A7HWA1 Flagellar biosynthetic protein FlhB n=9 Tax=Alphaproteobacteria RepID=A7HWA1_PARL1 Length = 359 Score = 392 bits (1009), Expect = e-108, Method: Composition-based stats. Identities = 130/360 (36%), Positives = 211/360 (58%), Gaps = 2/360 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D+ D +KTE PT +LE+A ++G + +S+E+++ +++ G + I S A L G Sbjct: 1 MADQDDSEKTEEPTHRKLEEAHKKGDLVKSQEVSTWFVMIGGATAIALMAPSTASSLMGS 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L+ L +I D + + + A ++++ ++ +V AL+ ++ VF+ ++ Sbjct: 61 LTVFLAQPETIPMDAEHLRRIWLNVGSSAFMSMIGPLAVLVGAALVGHLIQHAPVFTAEN 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++PK SK++P G++R+F ++ L K ILK +VGSV+ +W ++ +M Sbjct: 121 MKPKLSKISPKEGLQRLFGPKSLMNLAKGILKLTIVGSVSVLIIWPERDRLALMMTWEIA 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + L V+ + + D F+ +KK RMS Q+++DE+KQ EGDP V Sbjct: 181 QLLPLVQMLALKMFAGVIAVMTVVAALDYLFERMQWMKKQRMSIQEVKDEYKQMEGDPTV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K ++RQ++ R+RMMA VP A VI+ NPTHY+VAL+Y++ M AP VVAKG VA R Sbjct: 241 KAKLRQIRAERGRKRMMAAVPTATVIITNPTHYAVALKYEQG-MGAPVVVAKGVDAVAFR 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE+G E+ VP +E PPLARAL+ +I Q+I + Y AVAEV+ +V +LK G+R Sbjct: 300 IREVGQEHEVPIIENPPLARALHATVDIDQEIQPEHYKAVAEVIGYVMRLKAKIGGRGRR 359 >UniRef50_B4U884 Flagellar biosynthetic protein FlhB n=3 Tax=Bacteria RepID=B4U884_HYDS0 Length = 353 Score = 392 bits (1009), Expect = e-108, Method: Composition-based stats. Identities = 119/352 (33%), Positives = 202/352 (57%), Gaps = 2/352 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ S++KTE TP+R K + EG + +S+E+ S L++LV ++F G + S ++ Sbjct: 1 MA--SENKTEKATPYRRGKLKSEGNVAKSQEVVSALLMLVSTGALFFIGYKIFILFSDLI 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 G P+ + L ++ + + PL VL+ + ++ G +F+ K L Sbjct: 59 LDGSLRIDDPSFTPSDATKFLGLSFKKLLSDITPLFILAVLIVVFGYILQFGFIFTFKPL 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +P FSKLNP+ G+K +FS EL+K LK +L+ + F L+ + ++ SP Sbjct: 119 EPNFSKLNPVDGLKNLFSLNALFELVKNSLKVMLLLIASFFILYFSFHTLVFSSYMSPSK 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + L+ + + + + + G D ++ F + K+++MS+Q+++DEFKQ EG+ VK Sbjct: 179 GLSEIARLIFKLLISIGIIGLMLAGLDFAYKKFDYEKRIKMSKQEVKDEFKQFEGNIEVK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +IR+ +R RMM +VPKA V++ NPTH++VAL+Y + AP VVAKG +A +I Sbjct: 239 AKIRRRMMELSRSRMMQEVPKASVVITNPTHFAVALRYIPKQDRAPIVVAKGQDYMAKKI 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 EI N+VP + P LARALY+ +I ++IP + Y AVAE++A++ + K+ Sbjct: 299 IEIAELNDVPVVRKPELARALYKAVDIEEEIPPEFYKAVAEIIAYIVKRKQR 350 >UniRef50_C5SN70 Flagellar biosynthetic protein FlhB n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SN70_9CAUL Length = 355 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 120/354 (33%), Positives = 203/354 (57%), Gaps = 3/354 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+DE +DKTE + +LE+AR++G + +S ++ L L+ +++ G +A L+ L Sbjct: 1 MADEGEDKTEEASARKLEEARKKGDVAKSADVPQALSLIAACALVMLYGDKIALSLTETL 60 Query: 61 SAGLHFDH--SIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + H + L L+ + + + ++ I + GL+FS + Sbjct: 61 RVFVAAPHLLRDSLMGDGGLTIAHHLMGQVLPIIALILLVAGAAGAIGSLAQTGLMFSTE 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L+P FSKLNP+ G KR+F + K ++K I VG +T L + L SP Sbjct: 121 KLKPDFSKLNPMAGFKRLFGVDALIQFAKTVIKLIAVGVITWMILKGRAGDVAGLAGASP 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + + A ++ A+ V L ++ G D F Q ++++M++ +++DE+KQ+EGDPH Sbjct: 181 LMVLPYAKEVFFSLAVAVCLFMLLEGGADYFIQKLRFSQRMKMTKTEVKDEYKQTEGDPH 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VKGR++Q++ +R+RMMA+VPKA V++ NPTHY+VAL+YD + AP VAKG +AL Sbjct: 241 VKGRLKQIRMEKSRQRMMANVPKATVVITNPTHYAVALRYD-EETPAPLCVAKGVDTLAL 299 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 +IRE+ ++++ +E PPLARALY ++ + IP + AVA+++++V KR Sbjct: 300 KIREVAGDHDIAIVEDPPLARALYAAIDVDEIIPETHFQAVAKIISFVMVRKRR 353 >UniRef50_Q3V7G4 Flagellar biosynthetic protein flhB n=2 Tax=Proteobacteria RepID=Q3V7G4_AZOSE Length = 388 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 152/321 (47%), Positives = 222/321 (69%), Gaps = 1/321 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+++SD +KTE +P RLE+AREEGQ+P+SREL++ L+L+ G S +W G + R+ GM Sbjct: 1 MAEDSDLEKTEQASPRRLEQAREEGQVPQSRELSTFLVLITGASGLWLMGGWIGERMLGM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L G F+ ++ DP L+L L +A+L +LPL +++ A+ +P++LGG VFS K+ Sbjct: 61 LRHGFRFERALAFDPQLMLQDFGDLFTQALLTMLPLFGVLMVAAVGAPILLGGFVFSPKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L + +++PL GI RMF E+LK++LK +VG + F +W + L +E+ Sbjct: 121 LGLELDRMDPLKGIGRMFLLHGLVEMLKSLLKAAVVGGIGVFAMWRERDHIFALTSEAVE 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ + + V ALL+++G+ + DV FQ++ + K+LRM++++++ E K+ EGDPHV Sbjct: 181 RAVPDFLQAVLFSALLIIMGLALLALIDVPFQLWQYHKRLRMTKEEVKREGKEQEGDPHV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGRIR MQR ARRRMMA+VPKADV+V NPTH+SVAL+YD KM AP VVAKG G +AL+ Sbjct: 241 KGRIRSMQREMARRRMMAEVPKADVVVTNPTHFSVALKYDAQKMGAPVVVAKGRGEIALK 300 Query: 300 IREIGAENNVPTLEAPPLARA 320 IRE+ E+ VP LEAPPLARA Sbjct: 301 IRELAKEHKVPLLEAPPLARA 321 >UniRef50_B6IS89 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodospirillum centenum SW RepID=B6IS89_RHOCS Length = 359 Score = 390 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 135/355 (38%), Positives = 215/355 (60%), Gaps = 3/355 (0%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+++ D KTE PT +L ARE+GQ+ +S E+ +L IL G+ ++ R L Sbjct: 1 MAEDQDQDSKTEEPTDKKLSDAREKGQVAKSMEVGNLFILASGLVMVLLLLPWSGRILWD 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + H+I+ P + + L + AL P + ++L AL +P++ GL+FS + Sbjct: 61 AMMPFVERPHAILMAPAALGDVLTDLTLDIAFALAPTLVLLLLAALAAPIIQVGLMFSAE 120 Query: 119 SL-QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 ++ + +K+NPL G+K S + E LK++ K +LVG V L W + +A Sbjct: 121 NVFKFDLNKVNPLTGLKNKVSLKNLVEFLKSLGKLVLVGIVVSVLLLPLWTSIEHFLALP 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + + VV+ + + G D FQ + ++++RM++Q+++DE+KQ+EGDP Sbjct: 181 LPSVIVETRHEAAKLIAAVVIVLGAIAGADYAFQRYQFMQQMRMTKQEVKDEYKQTEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K +IRQ++ +R RMMA VP ADV+V NPTH++VAL+YD + MSAP+VVAKGA L+A Sbjct: 241 LIKSKIRQLRMQRSRNRMMAAVPSADVVVTNPTHFAVALKYDASAMSAPRVVAKGADLIA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 RIRE+ E VP + PPLARAL+ AEI ++IP + Y AVA+V+++V++LKR Sbjct: 301 KRIRELAEEAGVPVISNPPLARALFATAEIDEEIPAEHYKAVAQVISYVFKLKRK 355 >UniRef50_C8W1H2 Flagellar biosynthetic protein FlhB n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1H2_DESAS Length = 354 Score = 390 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 116/350 (33%), Positives = 195/350 (55%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ +KTE TP +L +AR +GQ+ +S +L + +++L V + + + Sbjct: 1 MAQGGQEKTEKATPRKLLQARRKGQVAKSSDLNAAVLMLAVVLLFYSIKQQQLSSMYKYF 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 S L ++ ++ + + P++ VV+VAL+ M GLVFS +S+ Sbjct: 61 SWYLANFTQYRESQVSLMQLMVSFSIYYIKLMAPVLIVVVIVALLINFMQVGLVFSSESI 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +P+ + NP+ G KR+F+ ++ EL K I K +++G +T + + +++ + +P Sbjct: 121 KPQLKRANPIEGFKRIFTVRSLVELAKNIFKLLVIGGITYNLISGRFNELLLIFYATPAM 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + M D +Q + K +RMS+QDI+DE+KQ+EGDP +K Sbjct: 181 IFQTVSGFILRILGWGGIVYFAMALLDYLYQRYEFQKSMRMSKQDIKDEYKQTEGDPLLK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 ++R+MQR + R+ ++P+A V+V NPTH++VAL+Y E P V AKGA +ALR+ Sbjct: 241 SKLREMQRKMSLSRIREEMPRATVVVTNPTHFAVALRYSEGDADVPLVTAKGADYLALRM 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 RE+ E NVP +E LAR LY E+G +IP +LY +VAE+LA V++ K Sbjct: 301 REMAKEYNVPVIEQRELARLLYDRVEVGTEIPYELYQSVAEILAMVYKKK 350 >UniRef50_A4YXU5 Flagellar biosynthetic protein FlhB n=12 Tax=Bradyrhizobiaceae RepID=A4YXU5_BRASO Length = 359 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 134/358 (37%), Positives = 198/358 (55%), Gaps = 3/358 (0%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++E D DKTE PT RL++A E G + +S+EL + ++ V+ S+ + Sbjct: 1 MAEEGDTEDKTEDPTQKRLDQALERGDVVKSQELNTWFVIAAATLVMTTFSGSIGTAVLV 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + I D +L L + A+ I V+L A+ +M LV+SG+ Sbjct: 61 PMRNLIANSWMIHTDGAGLLALARSLSFAVIAAIGVPILMVMLAAIAGNMMQHRLVWSGE 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L+P SK++PL G KR+F Q A K + K +L+G+V LW ++ L+ Sbjct: 121 PLKPSLSKISPLSGAKRLFGKQAAANFAKGLFKLVLLGTVMVMILWPERLRLEALLHMDV 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 +G M L VV + + D FQ ++ +MS Q++++EFKQSEGDPH Sbjct: 181 AELLGVTMSLTTHLMGSVVALLALVAIGDYLFQYRQWYERQKMSLQEMKEEFKQSEGDPH 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VKGRIRQ+++ ++RMMA VPKA VI+ NPTHYSVAL Y+ M AP VAKG +A Sbjct: 241 VKGRIRQIRQQRMKKRMMAAVPKASVIITNPTHYSVALSYERG-MQAPVCVAKGVDNIAF 299 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 +IREI +++P +E PLARALY EI ++IP + Y AVAE++ +V L+R Sbjct: 300 KIREIAKAHDIPIVENVPLARALYATVEIDEEIPVEHYHAVAEIIGYVMGLRRNLSGR 357 >UniRef50_Q0EZ55 Flagellar biosynthesis protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ55_9PROT Length = 355 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 127/355 (35%), Positives = 208/355 (58%), Gaps = 3/355 (0%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLIL-LVGVSVIWFGGVSLARRLS 57 M+DE D +TE TP R E AR++GQI S+E ++ + ++ + VI G ++ Sbjct: 1 MADEQDKSQQTEEATPKREEDARKKGQIATSKEPSTAIAFTVISLIVITGLGSWFGEQMQ 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 ML+ L I + +I + + + +LP+ ++L+ L+ M+ G VF+ Sbjct: 61 HMLTNYLSGAVHIKATGEGMQKLLISAVTDMAMVVLPIAVPIMLLGLLVTFMVSGPVFTF 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 +++ PKF K++PL GIKR+FS + AE +K++LK +L+ + + +++ + Sbjct: 121 ETMIPKFEKISPLKGIKRLFSTKALAEFIKSVLKLVLISVACATIVSGMFSEILHTALKD 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 P + LV + + + DV +Q + H K LRMS+++ RDE K SEGDP Sbjct: 181 PADIAALTLFGSVKITTLVAVIFVVIALADVLYQRWEHAKSLRMSKKEQRDEHKDSEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K +IRQ+Q A+ RMM+DVP ADVI+ NPTH S+AL YD AP+V+AKG G +A Sbjct: 241 QLKAKIRQIQMQQAQNRMMSDVPDADVIITNPTHISIALAYDPLSPGAPRVLAKGKGHLA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 +IREI E+++P E PLAR+L++ ++G +IP L+ A+A +LA +++LK+ Sbjct: 301 AKIREIAREHHIPMRENKPLARSLFKQVKVGDEIPEVLFEAIAIILAEIFRLKQR 355 >UniRef50_UPI00016C3B58 flagellar biosynthesis protein FlhB n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3B58 Length = 355 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 129/353 (36%), Positives = 192/353 (54%), Gaps = 3/353 (0%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+++ + KTE PTP R E+AR +GQ+P S EL L+L+ GV + + G L + Sbjct: 1 MAEDVDQESKTEDPTPRRREEARRQGQVPFSAELVGSLVLVAGVLGLRYLGPDLWATMIT 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + A L + + A+LP ++ V + + V G + + Sbjct: 61 VFRADLPRVGREEFGTAEAAELLGRTALRMIGAMLPFFGLLLAVGVGASVAQVGFQLNTE 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L+P KLNP+ G+ R+FS + L + K + + V + L + + Sbjct: 121 KLEPNLDKLNPVGGLGRLFSLGSVVRGLLTVAKVLALAGVAYYVLNGRGGLIASIGMGRI 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A A LV AL + V + FD +Q + + L M++++++ E KQ EGDPH Sbjct: 181 GEAAPVAWALVMRLALYLAGAVALVAVFDYAYQRYKFEQSLMMTKEELKQELKQEEGDPH 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK R+RQ+ R +R+M+++VPKA V+V NPTHY+VAL+YD N+ SAP VVAKG G AL Sbjct: 241 VKARVRQIARERTKRKMLSEVPKATVVVTNPTHYAVALRYDSNRDSAPVVVAKGKGAFAL 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 RI + E+ VP LE PPLARAL+ GQQIP L+ AVAEVLA+V +++ Sbjct: 301 RIAKRARESGVPVLERPPLARALH-SVREGQQIPSALFRAVAEVLAFVMKMRG 352 >UniRef50_Q2P9D1 HrcU protein n=12 Tax=Xanthomonas RepID=Q2P9D1_XANOM Length = 359 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 118/359 (32%), Positives = 183/359 (50%), Gaps = 2/359 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S++KTE PT +L AR++G++P S ++T+ +L + V+ G + + G Sbjct: 2 SEEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFVDHMRALTRIGF 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F + D I + + + +L +LP ++ ++ L+ GL S K + PKF Sbjct: 62 DFSENT-RDATAINRALAHIGIQGLLLMLPFLAACLVAGLVGGAFQTGLNASLKPVSPKF 120 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 LNP G+K++FS ++ LLK I+K IL+G V + P ++ L E+P+ Sbjct: 121 DSLNPANGVKKLFSLRSLINLLKLIIKAILIGVVMWVGIRTLMPMIIGLAYETPLDISQI 180 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 A + + L VL I + D Q + ++ RMS+ + + E+K+SEGDP +KG+ + Sbjct: 181 AWRTLSMLFALGVLLFILVGAADWSVQHWLFIRDKRMSKDEQKREYKESEGDPEIKGKRK 240 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + + V KA V+V NPTHY+VAL Y+ + P+VVAKG AL +R Sbjct: 241 EFAKELVFGDPRQRVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFA 300 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQP 363 +P + PPLARALY E+G IP QL+ VA VL WV L R G P Sbjct: 301 HNQGIPIVANPPLARALY-QVELGDAIPEQLFETVAVVLRWVDGLGRDHGDGDGNGALP 358 >UniRef50_A9KNE0 Flagellar biosynthetic protein FlhB n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KNE0_CLOPH Length = 373 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 124/350 (35%), Positives = 191/350 (54%), Gaps = 4/350 (1%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG- 63 +KTE T +LE AR+EGQ+ RS++L + LL VI +A S Sbjct: 23 GGEKTEEATTKKLEDARKEGQVARSQDLITASGLLALFMVIKLFSGYIAGGFLDAFSKSY 82 Query: 64 --LHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 + + + + +L LP+ V+VA + + +GK LQ Sbjct: 83 KEIETLAKEEMTYQIGSKLMNQMGINILLICLPVFITGVVVAFVVNIFQVKWKLTGKPLQ 142 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES-PIT 180 PKF+K+NPL G K+M S EL+K+I+K ++ + L ++ L Sbjct: 143 PKFNKINPLSGFKKMLSMDKIMELVKSIIKVGIIIYIVYNALKDELGKLYLLYEMGNLEV 202 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + +V + + + I + D +Q K +RM++Q+I+DEFKQSEGDP +K Sbjct: 203 VIAYIGSIVLDLGIKISVLFIVVGLADFIYQKIKFKKDMRMTKQEIKDEFKQSEGDPQIK 262 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +I+Q R A++RRMM +P+ADV++ NPTH++ AL+YD+ AP ++AKGA L+A +I Sbjct: 263 SKIKQKMRQASQRRMMQRLPEADVVITNPTHFACALKYDKEVSEAPILIAKGADLLAAKI 322 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +EI EN +P +E PLAR LY + +I +IPG+LY VAEVLA+V+ LK Sbjct: 323 KEIAKENEIPIVENKPLARMLYYNVDIESEIPGELYQMVAEVLAYVYSLK 372 >UniRef50_C0QA53 FlhB2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QA53_DESAH Length = 357 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 133/355 (37%), Positives = 216/355 (60%), Gaps = 3/355 (0%) Query: 1 MSDE---SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M+++ +KTE + +LEKAREEGQ+ +S E+ S+++LL GV + + +RL Sbjct: 1 MAEDPGGGGEKTEGASSKKLEKAREEGQVAKSTEVPSVVVLLAGVLALNAFAFFIYQRLI 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 +L GL F +++ ++ + + + + L PL+ V + AL+S + G V S Sbjct: 61 LVLQDGLSFTGIPLSNDVAVVHLLFVATQRLFIILGPLLLAVFVAALVSNIFQVGFVLSW 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 K++ PKFS+++P+ G + FS++ E LK+ILK ++ VT + ++RL Sbjct: 121 KAVAPKFSRIDPIKGFAQKFSSRALMEFLKSILKIAIIFGVTYMVVKSEVENIIRLYDHG 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + + + + V+L + + D FQ + ++ +M++Q+++DE KQ+EGDP Sbjct: 181 VAAILLYVLKVSLEIFIKVILVMAVLAAIDFAFQRWKFMEDQKMTKQEVKDEHKQAEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 VK RIRQ+Q AAR+RMM+DVP+ADV+V NPT ++A++YD M+AP +VAKGAG VA Sbjct: 241 QVKARIRQLQATAARKRMMSDVPEADVVVTNPTRLAIAIRYDGMTMNAPTIVAKGAGAVA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 IR I E+NVP +E LAR LY+ E+GQ++P + + AVAE+LA V++LK Sbjct: 301 ANIRRIAEESNVPLVENKALARNLYKIVEVGQEVPTEEFQAVAELLAQVYKLKGR 355 >UniRef50_A9BHY6 Flagellar biosynthetic protein FlhB n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BHY6_PETMO Length = 363 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 128/343 (37%), Positives = 199/343 (58%), Gaps = 2/343 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 DKTE PTP RLEKAREEG IP+S E + L +W L + + L Sbjct: 21 DKTEDPTPRRLEKAREEGNIPQSNEFNMAVSFLSISLFLWIIFEPLLNDIFKVFYDYLSL 80 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 D + P +LG I + L+ V+V+ + ++ +F+ KSL+ SK Sbjct: 81 D--LDYSPTDLLGYEITAHMNLYIKLILFFVVAVVVSTLLGMIQTKFLFTFKSLKLDLSK 138 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 +NP+ G KR+FS ++ EL+KA+LK ++G +T + +W +++ L E + Sbjct: 139 INPIKGFKRLFSLRSVVELIKALLKLTILGLLTYNIIKSNWFKILSLAGEETGFSFNVIF 198 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 DLV + + ++ + FD ++Q + + K+L+MS+ +++ E K+ EG+P +K R R++ Sbjct: 199 DLVINILFQLGIVLLLLSLFDFWYQRYEYKKELKMSKYEVKQERKEIEGNPEIKQRQREL 258 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 R AR RMM VP+ADV++ NPTHY+VA++Y +M AP VVAKG VA +IREI + Sbjct: 259 MRNLARSRMMQKVPEADVVITNPTHYAVAIEYKAEEMQAPIVVAKGKDEVAFKIREIAFK 318 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 + +P LE P LAR +Y E+ ++IP LY VAEVLA+V++L Sbjct: 319 HGIPILERPALAREIYEKVELNEEIPEDLYTLVAEVLAYVYKL 361 >UniRef50_D0XSL6 Flagellar biosynthetic protein FlhB n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XSL6_9CAUL Length = 362 Score = 385 bits (991), Expect = e-106, Method: Composition-based stats. Identities = 126/365 (34%), Positives = 210/365 (57%), Gaps = 11/365 (3%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++++D KTE +P +LE+AR++G + +S ++ L LL V+ GG A ++ Sbjct: 1 MAEDADPESKTEEASPQKLEEARKKGDVAKSADVAPALSLLCVTGVLIMGGGYFATNMAQ 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALIS----PVMLGGLV 114 + H+++ G + + + + P + V+L A++ V GLV Sbjct: 61 GFLPFIAAPHAMLGGLEA--GGGVEIGARVLWVVAPFLGAVMLAAILGGVGGNVAQSGLV 118 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 S + ++PK+SK++P+ G KR+F + + +LK + VG + L H Q + Sbjct: 119 ISAEKMKPKWSKVSPMAGFKRIFGPDGLMQFAQTLLKLVAVGVICWMVLKPHARQFETMA 178 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 A SP+T + A DL+ ++ + G D +Q K++RMS++++++E+KQSE Sbjct: 179 AMSPLTILPLARDLMIALMSSALVFLALTAGGDFVWQKMRFAKRMRMSKEELKEEYKQSE 238 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDPH+K +++Q++ +R+RMM +VPKA VIV NPTHYSVAL+Y+ +AP VAKG Sbjct: 239 GDPHIKAKLKQIRMQRSRQRMMQNVPKATVIVTNPTHYSVALRYEAG-DAAPVCVAKGVD 297 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR--W 352 VA+RIRE+ E++VP +E PLARALY +I + IP + + A A V+ +V + ++ Sbjct: 298 AVAMRIREVAREHDVPIVENVPLARALYAAVDIDETIPREHFEAAARVIGFVMKKRQPGM 357 Query: 353 RLAGG 357 R AGG Sbjct: 358 RRAGG 362 >UniRef50_C8WWG5 Flagellar biosynthetic protein FlhB n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWG5_ALIAD Length = 361 Score = 385 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 125/351 (35%), Positives = 193/351 (54%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + ++TE TP R ++AR+EG++ RS ELTS + + + G ++ ++ L Sbjct: 11 AGERTERATPRRRQEARKEGRVARSPELTSAVAFAAVLVALRILGPAVWGEWENLIQRDL 70 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + + + A +LP+ + ++ L + VM +F + L P F Sbjct: 71 GGSALKSWTVEGVRALMATQVMAAARIMLPIAAVAAVIGLAAAVMQVRPLFVPQLLLPDF 130 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 +++P G +R+ S Q E LK++LK V V L QM+ L A G Sbjct: 131 QRISPATGWRRIASLQGALEALKSLLKLAAVVGVAYTSLASLAHQMINLSAAELDAVPGI 190 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 V A+ V ++ + D +Q +S + LRMS+Q+++DE K++EG+P VK +R Sbjct: 191 LGRAVFNLAIRVACAMVVIAAIDYVYQRYSLERSLRMSKQELKDELKETEGNPLVKSAVR 250 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + R A RRMM +V KADV++ NPTHY+VAL Y + M+AP+VVAKGA VA IR Sbjct: 251 RRARQIASRRMMQNVAKADVVITNPTHYAVALAYQSDTMNAPQVVAKGADFVAQEIRRRA 310 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 E++VP +E PPLA+ALYR +IGQ+IP LY AVAEVLA+V++++ Sbjct: 311 EEHDVPLVENPPLAQALYRTVDIGQEIPPDLYQAVAEVLAYVYRMRAKGRR 361 >UniRef50_C4Z5H8 Flagellar biosynthetic protein FlhB n=5 Tax=Bacteria RepID=C4Z5H8_EUBE2 Length = 372 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 108/354 (30%), Positives = 192/354 (54%), Gaps = 6/354 (1%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +KTE T +L+ R+EGQ+ +S+EL + + L+ +I ++ +L Sbjct: 19 GGEKTEPATSKKLDDVRKEGQVAKSKELITAVSLMTLFIIIKIYVGNIGTKLIDSFKTIY 78 Query: 65 HFDHSIINDPN------LILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 +I+D + + + A++P++ V++A++ + + + K Sbjct: 79 GLMGKVIDDSSKGVTVNMAASIASQAFTIILNAVIPILIIAVIIAILGNALQQRWMVTAK 138 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L PK SK+NPL G KR+FS + ELLKAI ++ + + + ++ + Sbjct: 139 PLAPKASKINPLNGFKRLFSVRQLFELLKAIAMMSIIVIMVYNCVKKNMNILLTFYDVTL 198 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 TA+ +++ + + + + D+ +Q M++Q+++DEFK +EGDP Sbjct: 199 YTALATVGNIIINLGIQISAVFLVVGFVDLLYQRHKFKNDNMMTKQEVKDEFKNAEGDPQ 258 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VKG+IR+ + +RRRMM +P+ADV++ NPTH++VAL+Y+ ++ AP V+AKGA +A Sbjct: 259 VKGQIRRKMQEISRRRMMQQLPEADVVITNPTHFAVALKYEPDEGKAPVVIAKGADYLAF 318 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 +I++ E N+ +E PLAR LY + +IG +IP +LY AVAE+LA V + Sbjct: 319 QIKDRAKEYNIAIVENKPLARILYHNVDIGTEIPPELYYAVAEILASVLRANNR 372 >UniRef50_B1K3A0 Type III secretion exporter n=13 Tax=Betaproteobacteria RepID=B1K3A0_BURCC Length = 379 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 130/375 (34%), Positives = 203/375 (54%), Gaps = 3/375 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS++ DKTE TP +L KAR EGQ+ RSR++ + + +LV + +I + L + Sbjct: 1 MSEQQTGDKTEKATPQKLRKARMEGQVARSRDIGTCVGILVALKLIVVLTPAWLVELKHI 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + N + + L PL + + +++ ++ GG + S K+ Sbjct: 61 FALSFADLSGDDRLGNAVSMLFPAAVLLMCKMLAPLAAVPAGI-IVASLIPGGWIISHKN 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + PK ++LNPL G+KR+ S + + +LK +++ + + +RL Sbjct: 120 IMPKLNRLNPLSGLKRLVSGKHYMQFGTTVLKALVLMATLFIVCRSNLSGFIRLQGAPLA 179 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ +L A+ + + D+ Q + RMS++DI++E KQSEG P V Sbjct: 180 DALTGGANLFLSSAVTLSCIITVFALVDIPVQQIIFKRGQRMSKRDIKEEMKQSEGRPEV 239 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RIRQ+QR AR+ + VP AD++V NPTHY+VAL+YD + AP VVAKG VAL Sbjct: 240 KSRIRQIQRQLARQGIRKTVPTADLVVMNPTHYAVALKYDVTRAQAPYVVAKGVDEVALF 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA-GGQ 358 IR++ +NV LE PPLARA+Y +++ QQIP +LY AVA+VL++V Q+K +R Sbjct: 300 IRDVARGHNVEVLELPPLARAIYHTSQVNQQIPAELYRAVAQVLSYVLQIKAFRSGRRDV 359 Query: 359 RPVQPTHLPVPEALD 373 P PT + +PE L Sbjct: 360 SPSLPTGITIPEHLQ 374 >UniRef50_A8U5W0 Flagellar biosynthesis protein B n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5W0_9LACT Length = 355 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 113/350 (32%), Positives = 190/350 (54%), Gaps = 2/350 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+++ KTE +P +L AR++G+IP+S +LTS + +V + F G + + L Sbjct: 1 MAEKDG-KTEKASPKKLRDARKKGEIPKSPDLTSAVTFIVFILSATFLGNYILKNSLLYL 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L S+ N + + I ++ P ++ + A IS ++ G +FS + + Sbjct: 60 QNYLTAGFSVDGLENDLADIGMKAILFTLVLAGPFLAIAFVAAFISSIVQTGFLFSAEPI 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + K SK+NP+ G K MFS +T L+K + K LV + L ++ + Sbjct: 120 KFKLSKINPISGFKNMFSKKTLFTLVKNVAKLTLVFWMAYKTLETSIYLIINSSSIGTEK 179 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 DLV + + ++ + D +Q++ H K LRMS+Q+I+DE+K+SEGDP +K Sbjct: 180 IFFLMSDLVMELGTQLGVLLLILGLVDYIYQVYDHRKNLRMSKQEIKDEYKESEGDPQIK 239 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 + RQ R + + +V A ++ NPTH ++A++Y++ K P +VAKGA A +I Sbjct: 240 SQRRQRYRQLTKG-ALREVETATAVITNPTHLAIAIRYEKGKDEVPIIVAKGADHQAAKI 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 RE +VP +E P+ARA+Y+ EIGQ +P LY A+AE+LA V+Q++ Sbjct: 299 RERAKAFDVPIIENKPVARAMYKSVEIGQPVPIDLYQAIAEILALVYQME 348 >UniRef50_B6QWX7 Translocation protein in type III secretion n=2 Tax=Bacteria RepID=B6QWX7_9RHOB Length = 377 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 107/381 (28%), Positives = 193/381 (50%), Gaps = 5/381 (1%) Query: 1 MS-DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS S +KTE PTP R ++RE+GQ+ +S E+T+ + L ++ +WF +L G+ Sbjct: 1 MSGQSSGEKTELPTPKRERESREKGQVAKSTEVTTTISLFSVIAYLWFSWDLNFSKLVGL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + + G + M +LPLI + + + G +++ S Sbjct: 61 MDDLADLATRRDFSSSAGEGVFG-VFSTFMDIVLPLIGVAIAAGIFGNFVQFGFLWAVDS 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + PK SK++P G KR+FS + ++LK+ILK +L+ ++ F + + + ++ Sbjct: 120 IMPKLSKISPAEGFKRIFSLKQVVQVLKSILKIVLLSTMLYFTVKYAIGAYINSLSCGIP 179 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + ++ L + L + + D FQ +H+K L+M++++++ E K+SEG P + Sbjct: 180 CITNISGAIMKLILGISFLAFVGVAILDFMFQKHTHIKSLKMTKEEVKREHKESEGSPEI 239 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KG+ +++ + + + KA +V NPTHY+VA+ Y ++++ P VVAKG L AL+ Sbjct: 240 KGQRKRISQEILMSDNLENTRKASAVVVNPTHYAVAISYRPDEVAVPLVVAKGLDLTALK 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 +R VP LAR L+ +I + IP ++AAVAE+L W+ Q K G Sbjct: 300 MRAEAEAAGVPIFANVKLARMLHAEVQIEELIPQDMFAAVAEILVWIDQNKDILYNG--- 356 Query: 360 PVQPTHLPVPEALDFINEKPT 380 P++ + + +KP Sbjct: 357 PLERGVIDLEHEKKTGEDKPN 377 >UniRef50_D0IYF3 Type III secretion exporter n=11 Tax=Comamonadaceae RepID=D0IYF3_COMTE Length = 393 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 142/378 (37%), Positives = 218/378 (57%), Gaps = 1/378 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ S DK T +L+K RE+GQ RSR+L+ L IL G ++ G + L + Sbjct: 1 MSE-SQDKNLPATERKLQKTREDGQGARSRDLSHLAILGTGALLMLMGTQPMINHLREAM 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + L F+ + P L+L + ++ + + +++S V GG +FS K + Sbjct: 60 ARQLVFNAAAAKTPALMLERFQSMLVLGLGIAVIFALVTTTASVLSGVAAGGWIFSFKPI 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 QP+F KLNPL G+K +FS Q ++K + TI++G V ++ + ++ + A+ Sbjct: 120 QPRFGKLNPLSGLKNLFSKQQLTTVVKMVFMTIVLGFVAWKYMSANIAEIASVSAQPSPM 179 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ + L+++ V+ + DV Q F +L+MS ++++ E K+SEG+P +K Sbjct: 180 ALTMVGSWLTTGITLLLIVVLLVALIDVPLQDFLFKSRLKMSHEEVKQEHKESEGNPQLK 239 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G+IRQ QR A R ++ VPKAD +V NPTHY+VAL+YD+ M+AP+V+AKG LVAL+I Sbjct: 240 GKIRQKQREIADRASVSAVPKADFVVTNPTHYAVALRYDDASMAAPQVIAKGTDLVALKI 299 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 REI + +P LE+P LARALY HA++ Q IP LY AVA+VLA+V++LK G P Sbjct: 300 REIAGAHQIPVLESPMLARALYAHADLDQAIPAALYTAVAQVLAYVYRLKAALSGQGPMP 359 Query: 361 VQPTHLPVPEALDFINEK 378 PVP LD + Sbjct: 360 DALGEPPVPVELDPHRGR 377 >UniRef50_B8J3L1 Flagellar biosynthetic protein FlhB n=5 Tax=Desulfovibrionaceae RepID=B8J3L1_DESDA Length = 359 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 108/345 (31%), Positives = 200/345 (57%), Gaps = 1/345 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 KTE TP R+ K R EG +P+S+EL + LL G+S+++ ++ + + L Sbjct: 9 SKTEEATPKRIRKQRGEGNVPKSQELGKAVSLLGGMSILYAWIGPMSEAIKKLFRHFLSH 68 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 +P + + L+ E ++P++ + ++++++ + G +++ K +PK + Sbjct: 69 AWEFDPNPENVYSLTLELMIEVCKIIMPILLTLAVLSMLAQRLQVGKLWTTKVFKPKLQR 128 Query: 127 LNPLPGIKRM-FSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNA 185 N GIK+M FS QT +K++L ++++ ++ + ++ + + + + Sbjct: 129 FNIFKGIKQMLFSPQTILRTIKSLLFSLILSTIPAWIIYKEYQNFLPMYYATTEGVAVYM 188 Query: 186 MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQ 245 + + ++ ++ + FDV+ +S+ + ++M++ +++DE KQ++GDP VK + R+ Sbjct: 189 LQMAFKLVSYALIPILIIAAFDVWQSRYSYKENMKMTKDEVKDEHKQADGDPVVKSQQRK 248 Query: 246 MQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGA 305 A +RM+ DVPKADV++ NPTH +VAL+Y+ + AP V+AKGA +A +I++ Sbjct: 249 KMMEAMSKRMLQDVPKADVVITNPTHIAVALRYNATEAPAPVVLAKGADHLAEKIKQAAR 308 Query: 306 ENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 E+NVP E PLARALY+ AE+G IP +LY AVA VLA +W+LK Sbjct: 309 EHNVPIRENVPLARALYKSAEVGDMIPEELYKAVATVLAAIWKLK 353 >UniRef50_Q1I766 Flagellar biosynthetic protein FlhB n=22 Tax=Gammaproteobacteria RepID=Q1I766_PSEE4 Length = 380 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 158/377 (41%), Positives = 238/377 (63%), Gaps = 2/377 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S+ DKTE PT R ARE+G+I RS+EL ++ + L G + G +A L ++ Sbjct: 4 SESGQDKTEEPTDKRKRDAREKGEIARSKELNTVAVTLAGAGGLLAFGGQMAETLMTLMR 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 A +I D + ++ + A+ ++ P++ + +++ ++P+ LGG +FSG LQ Sbjct: 64 ANFTLTREVIVDERSMGAFLLASGKMAIWSVQPVMILLFVISFVAPIALGGFLFSGSLLQ 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 PKFS++NPL GIKRMFS ELLKAI K +++ V L ++ + E A Sbjct: 124 PKFSRMNPLAGIKRMFSLHALTELLKAIAKFLVILVVALVVLASDRQALLSIANEPLEQA 183 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + +A+ +VG AL + G++ + DV FQ++ KKL+M++Q++RDE+K SEG P VK Sbjct: 184 VIHAVQVVGWSALWMAAGLLLIAAADVPFQLWQAHKKLKMTKQEVRDEYKDSEGKPEVKQ 243 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMS-APKVVAKGAGLVALRI 300 RIRQ+QR A++RRMMA VP+ADVI+ NPTHY+VALQYD K AP ++AKG +AL++ Sbjct: 244 RIRQLQREASQRRMMAAVPEADVIITNPTHYAVALQYDPEKGGAAPLLLAKGTDFLALKM 303 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 REIG E+ V LE+P LARA+Y E+ ++IP LY AVA+VLA+V+Q++++R G+ P Sbjct: 304 REIGVEHKVQILESPALARAIYYSTELEEEIPAGLYLAVAQVLAYVFQIRQYRAGKGKAP 363 Query: 361 VQP-THLPVPEALDFIN 376 LP+PE L + Sbjct: 364 EPLKKDLPIPEDLRRDS 380 >UniRef50_B1I5J8 Flagellar biosynthetic protein FlhB n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I5J8_DESAP Length = 359 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 122/359 (33%), Positives = 198/359 (55%), Gaps = 3/359 (0%) Query: 1 MSDESDD---KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M++ D KTE PTP RL++AR +GQ+ +S +LT + L + + + G RL Sbjct: 1 MAETRDSGQLKTEQPTPRRLQEARRKGQVAKSLDLTGAVTLAALLLLFFVGLEWFIIRLQ 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 + L S + ++ + A+LP ++ V ++ G +F+ Sbjct: 61 RLFLVYLQNFTSYSLTAENVNYLVLQSLALLGGAVLPAVAVAFFVTVLVSFAQVGFIFAP 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 L K +LNP+ G KR+FS++ E KAILK VG + + L+ ++ L S Sbjct: 121 SVLAVKLERLNPVQGFKRIFSSRGLFEFAKAILKICFVGILCFWVLYARVGDLLVLSVTS 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 P + +++ A + + D+ +Q ++H K L M+R ++RDE++Q+EGDP Sbjct: 181 PGQGLYLLHNVLLTVAAAAAGAYLLIAVLDLVYQRYAHHKSLMMTRFEVRDEYRQTEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 H+K +R+ QR + R+ +VP+A V+V NP H +VAL+Y E +M AP V AKGAG +A Sbjct: 241 HLKSWLRKRQREISMNRIKDEVPRATVVVTNPIHVAVALRYREGEMDAPLVTAKGAGYLA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 RI+E+ A++ VP +E LA+ LYR +G+ +P +Y AVAE+LA +++LK R AG Sbjct: 301 ERIKELAAQHKVPVVENRELAQYLYRRVPVGESVPVAVYQAVAEILAMIYRLKAKREAG 359 >UniRef50_Q2SH55 Type III secretory pathway, component EscU n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SH55_HAHCH Length = 345 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 107/344 (31%), Positives = 190/344 (55%), Gaps = 2/344 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PTP +L AR++GQ+ S+EL S +++ +++ G SL L ++ F Sbjct: 3 EKTEKPTPKKLLDARKKGQVAHSKELVSTAMMIAMYGLLFASGYSLVEALQSLIDLPARF 62 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + + + +++ LLP I V++ A++S V G +F+ +S++ K Sbjct: 63 YGQPF--GEALQAVLNGVFEKSLDILLPFILLVIVTAVVSNVGHVGPLFAMESVKFDLKK 120 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 ++P+ G+K++FS ++ ELLK+I+K + + + + + + + +L M Sbjct: 121 IDPVEGVKKLFSVRSLMELLKSIVKILFLSILIYWVITANLNDIRKLPHCGSDCIMPFIG 180 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 L+ A++ ++ + + D +Q H K+LRM++ +++ E+K +EG+P V G+ +Q+ Sbjct: 181 HLMLQLAMVSMVAFVIVAVLDFLYQKHEHQKQLRMTKDEVKREYKDAEGNPEVIGQRKQI 240 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 R M++ + KA VIV NPTH ++ + YD +K S P V+ K A R+++I A+ Sbjct: 241 HREMLDGGMISQIKKASVIVTNPTHIAIGIYYDGDKRSLPTVILKAKNTTAQRVKKIAAK 300 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 VP +E PLARALY AE+ IP +L VAEVL WV L+ Sbjct: 301 EGVPIMENIPLARALYAQAELENYIPSELIEPVAEVLKWVAGLE 344 >UniRef50_A7HLM7 Flagellar biosynthetic protein FlhB n=3 Tax=Thermotogaceae RepID=A7HLM7_FERNB Length = 384 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 127/347 (36%), Positives = 196/347 (56%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 DKTE TP + +KAREEGQ+P SREL S L L V G L L + Sbjct: 36 DKTEKATPRKRQKAREEGQVPISRELVSGLGFLFASMVFILLGKRLIDALITSTQSVFEI 95 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + I + R A L + L+ G L +LI ++ +F+ K L+ ++ Sbjct: 96 SDNDIRTLEDFIIYASQTFRPAFLVVAILVLGTALFSLIIGLLQTRFLFTFKPLKMDLNR 155 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LNP+ G+KRMFS ++ ELLKAILK ++G V + ++ +++ + S I Sbjct: 156 LNPITGLKRMFSLRSLFELLKAILKLAIIGFVGYSVIKGNFDKVLLTVDSSLIDGTLIMW 215 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 ++ + + +I + D ++ + + + ++M++Q+I++EFK+ EG+P +K R RQ+ Sbjct: 216 GVLSELIIKCGIALIVVSIADYYYSRYEYEQNIKMTKQEIKEEFKEIEGNPEIKRRQRQI 275 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 A RMM +VPKA V++ NPTH++ AL+YD + APK+VAKG VALRI +I + Sbjct: 276 MMQFAMHRMMQEVPKASVVITNPTHFACALKYDPEEDFAPKLVAKGVDKVALRIIDIARK 335 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 N+VP + P LAR +Y E+G IP +LY AVAEVLA+V+ L+ R Sbjct: 336 NDVPIVRNPRLAREIYYSTELGDIIPEKLYKAVAEVLAYVYTLREGR 382 >UniRef50_Q7UXG2 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodopirellula baltica RepID=Q7UXG2_RHOBA Length = 360 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 111/359 (30%), Positives = 197/359 (54%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD DK + + + +ARE+GQI +S++LTS +LL + ++ G ++A LSG + Sbjct: 1 MSDSGGDKKHSASERKRRQAREKGQIAKSQDLTSATLLLAAIGALYAIGGNMAAYLSGGI 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L ++ + + +A +P++ + + ++ V GL+ S L Sbjct: 61 EQALGETKLAPMTNQDATQYMLQISQRLAMAAVPMMILMFIGGVLINVFQSGLLLSTDKL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK S ++P+ G KR+ S Q L+ + K ++G + L H ++ + + S Sbjct: 121 MPKLSNISPMSGAKRILSLQGVMRLVFGMFKVGIIGGIAYLALRAHHGDVISMASLSVPQ 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + D + +L + +G+ + + +Q + + L M+ Q++RDE K +E DP V Sbjct: 181 LAKSMFDTLFGVSLWIGVGLFVLALLEYVYQWWKTEQDLMMTDQEVRDEMKDTEADPQVA 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R RQ+ R A ++ ++VPKADV+ +NPT ++A++YD M AP VVAKGAG++A RI Sbjct: 241 ARRRQVARQLAMGQLGSEVPKADVVASNPTELAIAIKYDPLTMPAPIVVAKGAGMIAQRI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 R + EN +P +E LA+ALY+ ++GQ++P + Y AVAE+L +V+Q++ ++ Sbjct: 301 RRLALENGIPVVERKELAQALYKLVDVGQEVPAEQYQAVAEILRYVYQMQGKKVPQATA 359 >UniRef50_B2TLW3 Flagellar biosynthetic protein FliR/FlhB n=6 Tax=Clostridium RepID=B2TLW3_CLOBB Length = 613 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 115/349 (32%), Positives = 195/349 (55%), Gaps = 1/349 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +D+KTE TP + ++++GQ+ RS++++ + + + SL G+L+ L Sbjct: 264 ADEKTEEATPKKKSDSKKKGQMARSKDVSVAITMAACTLAVSMLWGSLVDTFKGVLTYFL 323 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F + + I + + LP +++ + S ++ G + +G+ L+P Sbjct: 324 VFPSLKDFNELTAMSLISFSLLKVATVFLPFALAIMIAGVASSIIQTGFLITGEPLKPSL 383 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 K+NPL G+K MFS ++ L+K ++ ++ + ++ +++ ++ + + Sbjct: 384 GKINPLKGLKNMFSKRSLVGLIKNVVVVTIISILAYKYVKNNYVDIINISNLYLPSLGDE 443 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +LV + L ++ + D F Q H K+L+M++Q+I+DE+KQ+EGDP +K +I+ Sbjct: 444 IKNLVIGIFKQITLALVIIGATDYFVQFRLHNKELKMTKQEIKDEYKQAEGDPQLKAKIK 503 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDE-NKMSAPKVVAKGAGLVALRIREI 303 Q QR RRMM V A V++ NPTH ++AL+Y+E M APKVVAKGA VALR++ I Sbjct: 504 QKQREMGMRRMMQSVSDATVVITNPTHLAIALKYEEGGNMEAPKVVAKGADNVALRLKTI 563 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 +N+VP +E PLAR +Y EI Q IP LY VAEVLA V +LK+ Sbjct: 564 AKDNDVPIVENKPLARLMYDRVEIDQDIPQDLYQGVAEVLAIVLKLKKK 612 >UniRef50_A1T0L4 Flagellar biosynthetic protein FlhB n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0L4_PSYIN Length = 374 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 130/374 (34%), Positives = 215/374 (57%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD + DKTE + +L+K++ EGQI R++E S +LL + +A + Sbjct: 1 MSDNAQDKTEQASAQKLKKSKGEGQIARAKEFASACMLLGFCLYFYLSFERIAEAALNLF 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 F + + D + +L ++ + + P I VVL LI ++LGG VFS K++ Sbjct: 61 KLNFSFSVATLQDNDQMLIRLNKSLFTLIEIFFPFIFVVVLSTLIGSLVLGGWVFSFKTI 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 QPK KL+ L GIKRM+S +T EL+K+ILK ++ + FL ++ M+ L Sbjct: 121 QPKLDKLSFLKGIKRMWSLKTLVELIKSILKVAVIVYLLYSFLSNNLLYMLSLQRLPIEA 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + +L ++ ++ D+ +Q++ K+++MS+Q++++E KQ+EG P VK Sbjct: 181 SSIAVLTKLATYSLYIIAILLLYGLIDLPYQLYEFNKQMKMSKQELKEEHKQAEGRPEVK 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIRQ+Q+ ++R + VP ADVI+ NPTHY+VA++YD + AP +VAKG AL I Sbjct: 241 QRIRQIQQQMSQRAITKTVPDADVIIMNPTHYAVAIKYDPKRAEAPFLVAKGNDQTALFI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 + I +NNV + +P LARA+Y ++ Q IP QL+ A+A VL++V QL+R++ +P Sbjct: 301 QRIALDNNVEVVISPALARAIYHTTQLEQMIPNQLFVAIAHVLSYVMQLRRFKKNEIDKP 360 Query: 361 VQPTHLPVPEALDF 374 + +P+ F Sbjct: 361 AHLPNFVMPKGFQF 374 >UniRef50_B9Z4S0 Type III secretion exporter n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4S0_9NEIS Length = 380 Score = 380 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 132/381 (34%), Positives = 202/381 (53%), Gaps = 3/381 (0%) Query: 1 MSDE-SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M++ DKTE TPH+L +AR++GQ+ RSR++ S + LLV + + + + Sbjct: 1 MAETRGGDKTEKATPHKLRQARQQGQVARSRDMASAIGLLVALKLAFLSMPGWLDDFRRL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + N + + +LPL +LVA +S + GG VF+ + Sbjct: 61 FALSFATLSGQGALGNTWSMLFSGTLTLLVKMILPLAVIPLLVATVS-LFPGGWVFASRH 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 QP+ +LNPL R+ S Q +++ K+I+K +++G+V L Sbjct: 120 FQPRLDRLNPLAHFGRIASPQHASDIAKSIVKALVLGAVLYHVSRGAAQDFFALQGVPLD 179 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ A L+ L + I D+ Q L++ RMS+Q+I+DE+K +EG P + Sbjct: 180 EALSRAASLLMDALLALTAVFIAFALIDLPLQTLLFLRQQRMSKQEIKDEYKTTEGRPEI 239 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K R+RQ+Q A+R + VP ADV++ NP+HY+VAL+YDE++ AP ++AKG +AL Sbjct: 240 KQRVRQLQLQMAQRGVRKSVPTADVVIVNPSHYAVALKYDEDRAEAPFIIAKGIDEMALY 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG-Q 358 IR++ AE+ V L PPLARA+Y ++ QQIP LY AVA+VL +V QLK +R Sbjct: 300 IRQVAAEHAVEVLPIPPLARAVYHTTQVNQQIPAPLYRAVAQVLTYVLQLKAFRAGSRHS 359 Query: 359 RPVQPTHLPVPEALDFINEKP 379 RP P LPVP L Sbjct: 360 RPELPAELPVPHELAEPRNPA 380 >UniRef50_Q1NGK4 Flagellar biosynthetic protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGK4_9SPHN Length = 378 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 131/379 (34%), Positives = 202/379 (53%), Gaps = 7/379 (1%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+ E +KTE PTP +L+ A ++G I +SREL + L+++ G+ + G SL L Sbjct: 1 MAGGSEGGEKTEKPTPKKLQDAAKKGDILQSRELGTALVVMAGIGCLAVIGPSLIDALRD 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 ML L I D + + L+ L + ++ L A+ +P +LG L F Sbjct: 61 MLVEALRIRREDIVDFSPAKRGL-DLLASIALPVAGVMLATFLAAIAAPALLGSLGFRPG 119 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + PK KLNPL G+KR+F Q ELLK+I K L+GS+ + +W ++ L Sbjct: 120 AFAPKPEKLNPLSGLKRIFGMQGLIELLKSIAKVGLLGSIGVWLIWDRLTEITGLGKAGI 179 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A+ + ++ L++ G+ + G DV QI K+L MS+Q+++DE K+SEG P Sbjct: 180 APAIADVGNIFIFTCLVMAGGLFLIAGIDVPAQIMQRAKRLGMSKQEVKDEHKESEGSPE 239 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +KG IR+ Q V +A VI+ NPTH++VAL+Y + +AP VVAKG +A Sbjct: 240 LKGHIRRRQFEVLSGSTRKAVAEASVIITNPTHFAVALRYKPGQDAAPVVVAKGCDAIAA 299 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 IR++ + V L+ P LARA+Y + GQ + LY AVA VLA+V++++ Sbjct: 300 SIRDLADTHGVTVLQYPELARAIYFTSRAGQIVNEGLYMAVATVLAFVFRVENKMAGEMD 359 Query: 359 RPVQPTHLPVPEALDFINE 377 RP + VP+ L F + Sbjct: 360 RP----FITVPDDLRFDAD 374 >UniRef50_UPI0001C312BE flagellar biosynthetic protein FlhB n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312BE Length = 358 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 112/358 (31%), Positives = 190/358 (53%), Gaps = 6/358 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D+ +TE TP + + AR GQ+ RS ++ ++L+ G+ + G ++ + + Sbjct: 1 MADD---RTERATPRKRDDARRRGQVARSMDVNGAVVLIAGLFALSLLGPAVVGAMETSM 57 Query: 61 SAGLHF--DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 D + G + +R LA+ P+ + + +++ + GL S + Sbjct: 58 RDSFERISDPQAALTAGGLEGIAMSTLRTLALAIGPVAAVCAIAGIVANLGQVGLKPSAE 117 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +L+P+ ++NPL G + +F + E K+I+K ++G + + ++ + SP Sbjct: 118 ALKPQAQRINPLSGARNVFGPRMFFEGAKSIVKVAVIGVIVAMAVAPKMTELSATVGASP 177 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + LV + + + + D +Q ++H K+LRMS QD++DEF+ + Sbjct: 178 GQLAAELVSLVLSISQRAAIAYLVIGAIDYAYQKYTHEKQLRMSMQDVKDEFRSQQLPAE 237 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK R+ AR RMM+ VP ADV+V NPTH++VAL+YD AP VVAKG L+AL Sbjct: 238 VKSMQRRRMMQQARARMMSAVPDADVVVTNPTHFAVALKYD-GTKPAPIVVAKGQDLIAL 296 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 +IR + AE++VP +E PLAR+L+ E+GQ IP LY AVA+VLA V+++ Sbjct: 297 QIRRLAAEHDVPVIENRPLARSLHATVEVGQMIPEDLYQAVAQVLAHVYRVAGNARRK 354 >UniRef50_Q5DY36 Lateral flagellar export/assembly protein (FlhB-like) n=11 Tax=Enterobacteriaceae RepID=Q5DY36_ECOLX Length = 379 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 133/372 (35%), Positives = 208/372 (55%), Gaps = 3/372 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D S ++KTE P+ +L KAREEGQ+PRS+++ L VI A + Sbjct: 1 MADSSSEEKTEKPSAQKLRKAREEGQLPRSKDMGLAASLFAAFVVISSSFPWYADFVRES 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + H IN+P+ I + + +L + + AL+S ++ GG +F K Sbjct: 61 FISV-HQYAQEINNPDAIGQFLRHHLLILGKFIL-TLLPMPAAALLSSLVPGGWLFLPKK 118 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + P FSK++PL GI+R+FS++ AE K +K+ +V + L +++ + L A Sbjct: 119 ILPDFSKISPLKGIRRLFSSEHLAETGKMTVKSAVVLVMLWVSLRNNFAAFLGLQALPFK 178 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 AM + + L V+ I DV K L+M++Q +++E+K EG P V Sbjct: 179 LAMNDGLSLYASVMRNFVILFIFFALLDVPLAKALFTKGLKMTKQKLKEEYKNQEGKPEV 238 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K R+R++QR A ++ VPKA+V++ NPTHY+VALQYD+++ +AP VVAKG +AL Sbjct: 239 KARVRRLQRQLAMGQIRKVVPKANVVITNPTHYAVALQYDQSRAAAPFVVAKGTDEIALY 298 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IR++ AE+ V +E P LAR++Y ++ QQIP QLY A+A VL +V Q+K WR R Sbjct: 299 IRQVAAESQVEVVEFPRLARSVYYTTQVNQQIPFQLYRAIAHVLTYVLQMKHWRDGAQPR 358 Query: 360 PVQPTHLPVPEA 371 P H+ +P+ Sbjct: 359 PALNRHISIPKE 370 >UniRef50_A6Q2P0 Flagellar biosynthetic protein FlhB n=2 Tax=Bacteria RepID=A6Q2P0_NITSB Length = 351 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 121/353 (34%), Positives = 198/353 (56%), Gaps = 3/353 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ + KTE TP R EKAREEGQ+ +S+++ L+V + ++L + Sbjct: 1 MAKDP-SKTEKATPRRREKAREEGQVAKSQDIPISATLIVVFMLFLAYIPFAYKKLYELF 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 F + N P I L++ +P +++ ++S + G + + KS+ Sbjct: 60 --MFIFADPLYNIPQYNYSIIYLVMEFMGYLTIPFFLALLITGVVSNIAQIGFLLTFKSM 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK K++P+ G+KR+FS +T EL+K ILK I V+ F + + + +P Sbjct: 118 VPKLEKIDPIAGLKRLFSLKTLFELVKNILKLIAATIVSYFLVQFLLRDVFQYATTTPYK 177 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + L + IP+ D FF+ F + ++MS+ ++++E KQ EG+P VK Sbjct: 178 DAVLLVKYTLIMILGFAILSIPIAAIDFFFRKFEFEENIKMSKHEVKEEHKQMEGNPQVK 237 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 IR+ R + R+MA+VPKADV++ NP H++VAL+Y++ KM APKVVAKG +AL+I Sbjct: 238 SEIRKRMREMSMNRIMAEVPKADVVITNPVHFAVALKYEKEKMHAPKVVAKGKDYLALKI 297 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +EI E+ VP E PPLARA+Y+ ++ + IP LY A+A++ A V++ +R R Sbjct: 298 KEIAKEHGVPIEENPPLARAIYQACDVDEYIPENLYKAIAKIFAKVFKRQRRR 350 >UniRef50_C9NX90 Type III secretion inner membrane protein HrpY n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NX90_9VIBR Length = 350 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 100/350 (28%), Positives = 176/350 (50%), Gaps = 8/350 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ +KTE PT RL AR++GQ+ +S E+ + + V + G + + M+ Sbjct: 1 MA----EKTEKPTQKRLRDARKKGQVIKSNEIVTGFQMAVILGYFIIEGQGMMEAIWKMI 56 Query: 61 SAGL-HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + D + ++ + ++ + L+ +V+ S ++ G V++ +S Sbjct: 57 DLAITSIDLPLKVAAETVVAAFVYILIRFI---AGLVFILVITVAFSCMVQTGPVWASES 113 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+P F+K+N + K +FS ++ EL K +LK +++ V + L H L Sbjct: 114 LKPSFNKVNVINNAKNIFSMKSLFELCKNMLKILVLSLVFYYLLHQHVNMFQYLPTCGVD 173 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + L+ ++ + D F F +K+L+MS++D + E+K++EG+P V Sbjct: 174 CGVEIIFTLIKWLWGAFLVCYLVFSVGDYAFVHFQTMKQLKMSKEDTKQEYKETEGNPEV 233 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K + R++QR A ++++V K+ VIV NPTH +V L Y + P V+ K +AL Sbjct: 234 KQKRRELQRETANGSLVSNVKKSTVIVRNPTHIAVCLYYQPGETPLPLVLDKAQEHMALH 293 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 + E+ ++ VP +E PLARALY E GQ IP L+ VAE+L V + Sbjct: 294 VVEMAEKHEVPLVENIPLARALYHQVEPGQVIPESLFEPVAELLRVVMNV 343 >UniRef50_C2KYZ7 Flagellar biosynthesis protein FlhB n=1 Tax=Oribacterium sinus F0268 RepID=C2KYZ7_9FIRM Length = 361 Score = 375 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 115/353 (32%), Positives = 194/353 (54%), Gaps = 5/353 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D DKTEAP+ + AR+EG + +SR++ ++ +L + F + + L L Sbjct: 1 MAD--GDKTEAPSEKKRSDARKEGNVFQSRDIVTVAVLFGVFYAVRFMMPFIYKDLRNFL 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 S L N + + + + +PL+ V + +I+ ++ S K L Sbjct: 59 SYILELLDEPSPISNKLYLRFT---WLFVKSAMPLLLVTVFLGVIASLVQTRFNISFKLL 115 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PKFSKLNP+ G+ R+FS + ELLK ILK I++ + + + +++ Sbjct: 116 TPKFSKLNPMQGLGRIFSKKNVVELLKNILKIIILINFLYSIIKADIIPIAKMVHMDIQN 175 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + ++ V + + FD +Q + + L+M++Q+++DE+K EG+P +K Sbjct: 176 SSLALVSMMFDLITRVCGVFLIIALFDFMYQKWEYENNLKMTKQEVKDEYKMLEGNPEIK 235 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GR++Q RA A +RMM VP ADVI+ NP H ++A++YD +K +AP V+AKG +ALRI Sbjct: 236 GRMKQQMRARANQRMMQQVPDADVIIRNPEHLAIAIKYDPDKNTAPVVLAKGQDELALRI 295 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +G N V +E PLARA+Y +G++IPG Y AVAE+L +++Q + + Sbjct: 296 VAVGEANGVTAIENKPLARAMYPLCHVGKEIPGDFYGAVAEILVYIYQKENRQ 348 >UniRef50_B3PPK9 Flagellar biosynthesis transmembrane protein n=15 Tax=Proteobacteria RepID=B3PPK9_RHIE6 Length = 373 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 109/354 (30%), Positives = 180/354 (50%), Gaps = 1/354 (0%) Query: 3 DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSA 62 D+ D KTEAPT + A E+G +P SREL+ +L + F R+S L Sbjct: 18 DDKDSKTEAPTAKKQTDAAEKGNVPFSRELSIFATILATFIYLVFFLPENVGRMSETLRD 77 Query: 63 GLHF-DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 D I IL + L + L P +++ + S + + ++ Sbjct: 78 IFEQPDQWKIETGPDILALFVRLGWASAALLAPAFILLMVFGIASSIFQNLPTPVLERIR 137 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITA 181 P+ S+++P+ G R+FS E K++ K ++VG + F L + + M P T Sbjct: 138 PQASRISPVKGWSRLFSLPGLIEFGKSLFKVVVVGVILFFVLRSEYFGSIDAMFSDPQTI 197 Query: 182 MGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKG 241 + M + +++++ + D F+ +L+M+R ++++E KQ++GDP VK Sbjct: 198 LVRMMTAMRKIIIVMLIATAIVAIADFFWTRHHWFTELKMTRHEVKEENKQAQGDPFVKS 257 Query: 242 RIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 R R + R ARRRM+A+V +A +++ NPTHY+VAL+Y + AP V+AKG L+AL+IR Sbjct: 258 RQRSLMRDRARRRMIANVHRATLVIANPTHYAVALRYAREENDAPVVLAKGQDLIALKIR 317 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 EI +N +P E PPLAR+++ + IP Y AVAE++ V+ Sbjct: 318 EIAEQNGIPVFEDPPLARSMFAQVSVDSVIPSVFYKAVAELIHRVYAADGKNKR 371 >UniRef50_C6WJP3 Type III secretion exporter n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJP3_ACTMD Length = 363 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 130/362 (35%), Positives = 203/362 (56%), Gaps = 3/362 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS ++ D TE PT ++ A+ EG++ R+ +L + L +L + SL G+L Sbjct: 1 MSGKNKDATEEPTAKKVRDAKREGRMARTPDLGTWLGILGATWTLPMTLTSLLDIGQGLL 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 F + +P L + + + + LA+LPL +++ L++ + G L S K Sbjct: 61 KKAAGFMAAP--EPALAVAIVKDGVLDGALAVLPLSLTIIVATLVAAGLQGTLRMSTKQF 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PKF++LNPL GIK MF + E LK ++KT L+ + + P ++ S Sbjct: 119 KPKFTQLNPLKGIKNMFGPHSLWEALKTLIKTSLLAGLLYVSVSGLVPSVVASGTLSLAA 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A L +G + M D K+L+M++Q+++DE KQSEGDP +K Sbjct: 179 LTDVATGTAMSLLRLAAIGGLVMAVVDYAVAKRRIHKELKMTKQEVKDEHKQSEGDPQLK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G IR Q +R RMMA+VP ADV++ NPTH +VAL+YD + AP+VVAKGAG +A +I Sbjct: 239 GAIRSKQMQMSRNRMMAEVPNADVVLVNPTHIAVALRYDPAR-GAPRVVAKGAGAIATKI 297 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 RE+ E+ VP ++ PLARAL++ E+G +IP +++ VA+VLA++ +LKR A G Sbjct: 298 RELATEHRVPIVQDVPLARALHKACEVGHEIPFEMFGPVAQVLAFLHRLKRKGSAAGTHR 357 Query: 361 VQ 362 +Q Sbjct: 358 MQ 359 >UniRef50_B6AMB2 Flagellar biosynthesis protein, FlhB n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AMB2_9BACT Length = 362 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 132/348 (37%), Positives = 201/348 (57%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+DE + K E PT +LEKAREEGQ+ RSRE+ SL LL + + G ++ L + Sbjct: 1 MADEFEQKQEEPTARKLEKAREEGQVARSREVGSLFFLLAALLLFGSVGHTVVVGLENQM 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 G SI P+ I + ++ + PL G + ++++ + G V+S K+L Sbjct: 61 EQGFVEAPSIRLTPDSIGPYLGKILWNTLKTGFPLWGGFLAASILAFLFQGPPVWSVKAL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK+ +++P+ G+ R+FS ++ EL K ++K +LV V + L W ++ L A Sbjct: 121 VPKWERVSPVKGMGRLFSGRSLIELAKYLVKVLLVMFVVLWSLRGDWERLPALQAAGVHR 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 G + ++ + + D Q + LRM+R +IR+EFK++EGDPHV+ Sbjct: 181 FFGALTGFLRDALYRLIPLFVVIAILDFLLQRIQLNRSLRMTRSEIREEFKETEGDPHVR 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIR +QRA ARRRMMA V A V+V NPTH++VA++Y+ M+AP VVAKG VAL I Sbjct: 241 SRIRSIQRAMARRRMMAKVKTATVVVTNPTHFAVAIRYEPMTMAAPVVVAKGQDEVALNI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 R+I E VP +E PPLAR LY + ++IP + Y AVAE+L+ +++ Sbjct: 301 RKIAREARVPVMENPPLARTLYAACPLDREIPVEFYQAVAEILSLLYE 348 >UniRef50_Q1Q6S5 Similar to flagellar biosynthetic protein FlhB n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6S5_9BACT Length = 349 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 123/351 (35%), Positives = 214/351 (60%), Gaps = 2/351 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D +KTE PT R+ + R++G + +S +L+S + +LVG +++ G + + + Sbjct: 1 MADT--EKTEQPTGKRISEVRQKGSVAQSPDLSSAIAILVGFLLLYALGNIMYAGMKEIT 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L P++I+ +II I + LLP++ G+++V LI M GL+F+ K L Sbjct: 59 VFTLQNLSQKDITPDIIVEKIIYYIYVSAKILLPILGGLLIVGLIVSYMQTGLLFTLKPL 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +P +KLN + G+K++F+ Q+ +LL +++K +L+G + ++ ++ L+ Sbjct: 119 KPDLTKLNVISGVKKLFNVQSFVKLLFSVVKLLLIGGIGILYIKKELAKLDNLIDIGIAQ 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 L + V + ++ + D +Q + + + ++MS+++++DE KQ+EGDP +K Sbjct: 179 FFILTTKLTFGLVMRVSIALVILAMVDYIYQKWQYKRGMKMSKKEVKDERKQAEGDPVIK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +IR Q A +RM + +PKADV+V NPTHY+VAL+YD M APKVVAKGA +AL+I Sbjct: 239 SKIRSAQIQMALKRMASAIPKADVVVTNPTHYAVALKYDRKSMHAPKVVAKGADYIALKI 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +EI N +P +E LAR LY+ ++G++IP +LY AVA+VL++V+ LK+ Sbjct: 299 KEIAKINKIPIVEERSLARTLYKTVDVGKEIPQKLYYAVAKVLSYVYGLKK 349 >UniRef50_B6IQA2 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodospirillum centenum SW RepID=B6IQA2_RHOCS Length = 373 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 130/374 (34%), Positives = 211/374 (56%), Gaps = 5/374 (1%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS+ E KTE PT +L++AR +G +P SRE++S++++L GV ++ G + L+ Sbjct: 1 MSERPEDSQKTEEPTQRKLDEARRKGDVPVSREVSSMMLVLAGVILVGGLGSWMGGHLTD 60 Query: 59 MLSAGLHFDHSIIND-PNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 L + P + L E L LLP + ++ L++ V G+VF+ Sbjct: 61 DLLPLVENPGDFPLQAPADAFRLLAWLAGEIGLVLLPAAAILLAAVLLAAVGQNGIVFTT 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 + L+PK +++P+ G++R+ S +T E LK + K VG+ L +M L Sbjct: 121 ERLKPKLERISPIAGLRRLVSLRTLVEFLKGLAKVAAVGAALLVVLEPELHRMEALALTD 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 ++ + ++ I + D+ +Q FS ++ RM+ Q++++EF+Q+EGDP Sbjct: 181 VAALPELLTSVLTRLLVATLIASIAIALLDLVWQQFSWRRQQRMTLQELKEEFRQAEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 HVK RI Q++R AR+RM +D+P+A V++ NPTH++VAL+YD ++ AP +AKG LVA Sbjct: 241 HVKARISQLRRERARQRMFSDIPRATVVITNPTHFAVALRYDLSEAPAPVCLAKGMDLVA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 RIRE + VP +E PPLARAL++ EIG+++ + Y AVAEV+++V L+ G Sbjct: 301 RRIREAAMGHKVPIVENPPLARALHKSVEIGEEVQPEHYMAVAEVISYVVGLQARSQ--G 358 Query: 358 QRPVQPTHLPVPEA 371 P P VP A Sbjct: 359 AAPTPPGQPGVPPA 372 >UniRef50_A4SI11 Lateral flagellar biosynthetic protein, LfhB n=2 Tax=Aeromonas RepID=A4SI11_AERS4 Length = 378 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 140/378 (37%), Positives = 214/378 (56%), Gaps = 1/378 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS S DKTE + +L KAREEGQI RS+EL+S +LL+G + + S + + Sbjct: 1 MSQNSAQDKTEEASSQKLRKAREEGQIARSKELSSAGLLLLGGLAMQWMVPSFGHFFAEL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + FD DP +++ + + LLPL + L+ ++ ++ GG+V + K Sbjct: 61 MKRPQRFDWQGARDPQMMIHWTAEALLSMLWVLLPLFGFLALLLVLLSIVPGGMVLTWKK 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P KLNPL G+KRM S + ELLK++LK +L+GS L H WP +M + P Sbjct: 121 LLPSAEKLNPLKGLKRMLSTHSLMELLKSVLKILLIGSTLALMLQHQWPLLMMMNRMPPQ 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 AM A+ ++ +L+ + + DV +Q +S K+LRM++Q+++DE K SEG P + Sbjct: 181 AAMEQALQILSQAFILLGSVQMLIAVLDVPYQRWSLNKQLRMTKQEVKDEHKNSEGRPEI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +IRQ+Q AR R+ VP+ADVI+ N THY+VA++YD + +AP V+AKG +A R Sbjct: 241 KAKIRQVQGMLARARIEQRVPQADVIIVNTTHYAVAIKYDPERANAPYVIAKGVDGMAER 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IR++ +++ + P L RA+Y + Q++P LY AVA VL V QL+ + G++ Sbjct: 301 IRQVAKQHDKMVMSLPDLTRAIYYSTRVDQEVPAGLYTAVAYVLNHVLQLRAYAAGKGKK 360 Query: 360 PVQPTHLPVPEALDFINE 377 P L VP L Sbjct: 361 PTPLAPLHVPPELRQPER 378 >UniRef50_C8WBS8 Type III secretion exporter n=3 Tax=Zymomonas mobilis RepID=C8WBS8_ZYMMN Length = 380 Score = 372 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 128/380 (33%), Positives = 201/380 (52%), Gaps = 9/380 (2%) Query: 1 MSD---ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M+D + D KTEAPT RL + E+G + +S+EL +L ++ + L Sbjct: 1 MADSDVDQDQKTEAPTQKRLREVAEKGDVLQSKELGIAFAMLASLAWFLMISHRMVYDLG 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 ML GL FD + + + I LI +L L + A+ +P +LG L F Sbjct: 61 IMLKMGLSFDFNAFSKFDP-FSVFIRLITCIILPFSMLFVLMAFAAIAAPAVLGSLGFRW 119 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 ++L K +LNP+ G R+F Q EL K+I+K +L+GS+ + LW P +M+L Sbjct: 120 EALNFKPERLNPIAGFSRVFGMQGLFELGKSIVKVLLIGSLGLWILWQRLPVIMQLGRHD 179 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 A+ + + L++ + + + DV QIF ++LRMS+Q+I+DE KQ+EG P Sbjct: 180 LKAAINEIGHIFLILVLVMSVALAVVAAIDVPIQIFRRNRRLRMSKQEIKDEHKQTEGSP 239 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K +RQ Q A R V + V++ NPTH++VAL+Y + AP V AKG +A Sbjct: 240 EIKAAVRQRQIAVFRASNRKAVQDSTVVITNPTHFAVALKYKAGEDIAPIVTAKGIDELA 299 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 L +RE+ E++VP L P LARA+Y + G+ I +LY AVA +LA++++L G Sbjct: 300 LALREMADESDVPVLHYPLLARAIYFTSNSGELIREELYKAVASILAFIFRLN-----AG 354 Query: 358 QRPVQPTHLPVPEALDFINE 377 + + + VPE + F Sbjct: 355 EEGLTLPVIDVPEEVRFDEN 374 >UniRef50_P69986 Yop proteins translocation protein U n=49 Tax=Gammaproteobacteria RepID=YSCU_YERPE Length = 354 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 94/352 (26%), Positives = 179/352 (50%), Gaps = 2/352 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PTP ++ AR++GQ+ +S+E+ S +++ +++ S ++ + Sbjct: 2 SGEKTEQPTPKKIRDARKKGQVAKSKEVVSTALIVALSAMLMGLSDYYFEHFSKLM--LI 59 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + S + + + ++ E PL++ L+A+ S V+ G + SG++++P Sbjct: 60 PAEQSYLPFSQALSYVVDNVLLEFFYLCFPLLTVAALMAIASHVVQYGFLISGEAIKPDI 119 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 K+NP+ G KR+FS ++ E LK+ILK +L+ + + + +++L Sbjct: 120 KKINPIEGAKRIFSIKSLVEFLKSILKVVLLSILIWIIIKGNLVTLLQLPTCGIECITPL 179 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 ++ ++ +G + + D F+ + ++K+L+MS+ +I+ E+K+ EG P +K + R Sbjct: 180 LGQILRQLMVICTVGFVVISIADYAFEYYQYIKELKMSKDEIKREYKEMEGSPEIKSKRR 239 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q + R M +V ++ V+V NPTH ++ + Y + P V K +R+I Sbjct: 240 QFHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIA 299 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 E VP L+ PLARALY A + IP + A AEVL W+ + + Sbjct: 300 EEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLRWLERQNIEKQHS 351 >UniRef50_Q2RKD2 Flagellar biosynthetic protein FlhB n=5 Tax=Bacteria RepID=Q2RKD2_MOOTA Length = 374 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 125/348 (35%), Positives = 204/348 (58%), Gaps = 1/348 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 +++KTE TPHRL++ R++GQ+ RS +L++ ++LL V +++ + + ++ ++++ L Sbjct: 27 AEEKTEEATPHRLQEVRQKGQVARSNDLSTAMVLLACVVFLYWRRETFYQAMADLITSTL 86 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 D ++ L + L L PL++ V L + G VFS + L P+ Sbjct: 87 QDGWHQQLDGGSLMALGSQLALKVGLLLAPLLALAAAVGLAANFAQTGFVFSLEPLLPRL 146 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 L+P+ G++R FS + ELLK++ K ++V V + + Q++ + + Sbjct: 147 ENLDPVKGMQRFFSRRALMELLKSLAKVVVVSLVVWQLVKGQFTQLLLTVDMGLPATLDL 206 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +V L V + + D FQ + K LRM+RQ++++E KQ EGDP V+ R+R Sbjct: 207 VSRMVYRVGLGTVAVFLALAAADYVFQRREYQKNLRMTRQEVKEEMKQMEGDPLVRSRLR 266 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + QR AR RMM VP+A V++ NPTH +VAL+Y + AP+VVAKGAG +A RI+ + Sbjct: 267 EKQRQLARHRMMHAVPEATVVITNPTHVAVALRY-REEERAPRVVAKGAGSIAERIKAVA 325 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 +NVP +E PP+ARALYR E+GQ+IP LY AVAE+LA +++L+ Sbjct: 326 RRHNVPVVENPPVARALYRQVELGQEIPVALYQAVAEILARIYKLRGR 373 >UniRef50_A4Y0Q6 Flagellar biosynthetic protein FlhB n=1 Tax=Pseudomonas mendocina ymp RepID=A4Y0Q6_PSEMY Length = 377 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 134/374 (35%), Positives = 218/374 (58%), Gaps = 3/374 (0%) Query: 1 MSDE--SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS++ +KTE + H+L+K++E+GQ+ RS++L++ + LL + ++ F LS Sbjct: 1 MSEQNSGQEKTEEASAHKLKKSKEDGQVARSKDLSTTISLLATLFILKFSAGLFLEGLSD 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + + + + L P++ VLV + ++ GG VFS K Sbjct: 61 SFRLSYIQFGHSEIGLDDLDTLLGYNMLVFIKLLAPMLLTSVLV-VALSLVPGGWVFSAK 119 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + PK SKLNP+ G+ R+FSAQ +ELLK++LK +++ V + P+++ L S Sbjct: 120 NFAPKLSKLNPITGLGRIFSAQNWSELLKSVLKVLVLLGVGYVLVRAALPELIALQRSSV 179 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + A+ A++L L ++L + D+ Q + LKK+RM++Q+ ++E K EG P Sbjct: 180 VQAISAALNLTFNLILCLMLVFVLFSFIDIPLQRYFFLKKMRMTKQERKEEHKNQEGRPE 239 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK RI+Q+QR +R++ + ADVI+ NPTHY+VAL+YD K +AP V+AKG AL Sbjct: 240 VKARIKQLQRQMLQRQISKVIKNADVIIVNPTHYAVALKYDSKKAAAPFVLAKGVDETAL 299 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +R++ ++ + LE PPLARA+Y +I QQIP LY AVA VL ++ QLK WR Sbjct: 300 YMRQMAKKHELEVLEIPPLARAIYFTTQINQQIPAPLYTAVAHVLTYILQLKAWRQGRRS 359 Query: 359 RPVQPTHLPVPEAL 372 +P ++LP+P++L Sbjct: 360 KPQLASNLPIPDSL 373 >UniRef50_C4XT81 Flagellar biosynthetic protein FlhB n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XT81_DESMR Length = 357 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 118/358 (32%), Positives = 195/358 (54%), Gaps = 3/358 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ + KTE TP R KARE+G +PRS+EL L +L+ G+ + F ++ +L + Sbjct: 1 MARDP-SKTEKATPKRESKAREKGSVPRSQELPKLTVLMAGLFTVRFTLGNINEQLQEVF 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L + + + L + + LLPL+ + +VA ++ + G V+ K Sbjct: 60 RTFLGGRLDFTATTDDVAALMWSLSAKLAIMLLPLLLVMAVVAFVTQRLQVGEVWRPKIF 119 Query: 121 QPKFSKL-NPLPGIKRMF-SAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +P FS + NP+ G++R+ SAQT L K + V L + + + L +S Sbjct: 120 EPDFSNIVNPMRGLQRLLISAQTLVNLAKQTAMAFAISLVPYLILRKRFNEFLPLFYQSV 179 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 +D L +L + + DV++ + + + L+M++ +++DE KQS GDPH Sbjct: 180 DNIALFLLDNGFDMVLYTLLPMFVIAILDVWYTRWDYAENLKMTKDEVKDEHKQSFGDPH 239 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK + ++ +RRM+ DVPKADV++ NPTH + AL+Y+ + AP ++AKGA +A Sbjct: 240 VKQQQKRKMMEVMQRRMLQDVPKADVVITNPTHIACALRYNPLESPAPMLLAKGADFMAE 299 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 +I++I E+ VP E PLA+ALY++ EIGQ IP LY AVA +LA + + +R+ Sbjct: 300 KIKDIAKEHKVPIRENKPLAQALYKNVEIGQVIPEDLYQAVASILAQLDKFRRFNRPR 357 >UniRef50_UPI0001744A09 Type III secretory pathway, component EscU n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744A09 Length = 347 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 104/347 (29%), Positives = 192/347 (55%), Gaps = 2/347 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +K E PTP +L AR++GQ+ +S+++ + + + I S+ + ++ + + Sbjct: 3 EKNEPPTPKKLRDARKKGQVAKSQDVGTAALTIASFVTIGIMWPSMVEQAKELILLPVQY 62 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + + ++ + R+ +L LP++ V++V L + G + + + L+P+ K Sbjct: 63 YDKPFQQGS--MELMLAIGRKVLLMSLPILMVVMVVGLAAGFGQIGFMLTFEPLKPELKK 120 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LNP+ K++FS ++ ELLK+ +K ++G + + + RL + + Sbjct: 121 LNPMDKAKQIFSMKSLVELLKSTIKVGVIGIIIYYVTKASLDPLTRLPYGGEESVLTALQ 180 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 ++ + VV+ I + D FFQ + H+K+L+MS+ +++ E+K+SEG+P +KG+ +Q+ Sbjct: 181 PMIKALTMNVVMAYIIIAAADFFFQKYQHIKQLKMSKDEVKREYKESEGNPEIKGKRKQL 240 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 + AA+ M KA V+V NPTH ++A+ YDEN P+V+AKG VA R+ E+ E Sbjct: 241 AQEAAQSDTMGRTRKASVVVTNPTHLAIAIYYDENDDKMPRVLAKGEDHVARRMVEVARE 300 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +P ++ PLARALY + +I + +P L +AEVL WV + K R Sbjct: 301 EGIPVMQHVPLARALYENVDIDRFVPSDLIEPMAEVLRWVQEWKELR 347 >UniRef50_Q8D3G7 FlhB protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D3G7_WIGBR Length = 385 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 151/371 (40%), Positives = 231/371 (62%), Gaps = 2/371 (0%) Query: 1 MSDESD-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS++ + +K E PTP+RL+KAR +G IPRSRELTS IL+ G +IWF G +L ++ Sbjct: 1 MSNKDELEKQEDPTPNRLKKARSKGNIPRSRELTSFSILIFGWILIWFTGNNLLDKIIVE 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L L+F + N IL I L+ ++ + P+I ++++ +IS +LGG VFS KS Sbjct: 61 LKKNLNFKLYLYEHINYILVNIYLISKKFFFIIFPIIFIIMIITIISSGLLGGWVFSKKS 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L FS+LNP I R+FS E+ K + K + F+LWH Q+ L + Sbjct: 121 LNIDFSRLNPYKNISRIFSKNVFIEMAKTLFKFFFMLFSCIFYLWHTRFQISDLSDNNYS 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ N + ++ C +++L IP+V FD FQ+F+ K LRMS+++++DE K++EG+P + Sbjct: 181 NAIKNCILIISKCVFVIILSSIPIVFFDSIFQLFTFKKNLRMSKKEVQDENKENEGNPQL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K IR+ QR RMM +V K+DVI+ NPT+Y+V L+Y+ M AP ++AKG G +A++ Sbjct: 241 KHYIRKKQRHIYNMRMMQNVEKSDVIIVNPTNYAVGLKYE-KNMKAPVLLAKGTGNIAIK 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I+E E +P + PPLARA+Y++ IG+ IP +LY +VAE+L WV+ LK W+ GG Sbjct: 300 IKEKAQEKFIPIIAVPPLARAIYKYCNIGEYIPIELYESVAEILTWVYNLKNWKKLGGNP 359 Query: 360 PVQPTHLPVPE 370 P +P + +P Sbjct: 360 PKKPIGIKIPN 370 >UniRef50_A3D418 Type III secretion protein, YscU/HrpY family n=10 Tax=Proteobacteria RepID=A3D418_SHEB5 Length = 349 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 97/349 (27%), Positives = 170/349 (48%), Gaps = 6/349 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ +KTE PT RL +AR GQ+ +S E+ + L + + + + G +L + + ++ Sbjct: 1 MA----EKTEKPTEKRLREARNRGQVIKSAEIVTGLQMAIILGYFLYEGPALVQAMMALI 56 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 ++ + + + A+ L L +V ++ + G V++ +S+ Sbjct: 57 DLTINAINLPLETAAE--QIVGTFAMLALRFLGGLTLVLVFTIVVGNSVQTGPVWATESI 114 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 P +KLN + K++ S ++ EL K ++K ++ V + L + L Sbjct: 115 MPSMNKLNVMNNAKQLISLKSLFELAKNLVKVTVLSLVFYYLLHRYVNAFQYLPLCEEAC 174 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + ++ + + D FQ +S +K+L+MS+ D + E+K SEG+P +K Sbjct: 175 GISVISTMITWLWGSFLGCYLIFGIADYAFQRYSLMKELKMSKDDTKQEYKDSEGNPEMK 234 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 + R+ QR A + +V KA V+V NPTH +V L Y E + PKV+ K +AL I Sbjct: 235 QKRRETQREVASGSLANNVRKATVVVRNPTHIAVCLYYCEGETPLPKVLEKAEDHMALHI 294 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 + + VP +E PLARAL++H E G IP L+ VAE+L V + Sbjct: 295 VALAEKAGVPIVENIPLARALFKHVETGDVIPESLFEPVAELLRLVMAI 343 >UniRef50_Q5FQT1 Flagellar biosynthetic protein FlhB n=1 Tax=Gluconobacter oxydans RepID=Q5FQT1_GLUOX Length = 358 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 131/358 (36%), Positives = 198/358 (55%), Gaps = 2/358 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD SDDKTEAP+ RL+KARE+GQI SRE + + LL G + I+ L ++ Sbjct: 1 MSD-SDDKTEAPSSQRLQKAREDGQIVMSREAMNFVALLGGFAGIFMVLPYLVMDFVHVM 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + ++ +L I + +P+ + V ++ L + G + +SL Sbjct: 60 QVLMANAGTVPMAQGGLLNSTDHAIEAGLKLAVPMAATVAVLCLGGGFLQTGFLIHPESL 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PKF +++PL G KR+ T + KA+ K + V P R++ P Sbjct: 120 LPKFERISPLAGFKRIAGGGTLPDTFKALAKFAIFAVVLWNISKGAIPSAPRMVGLEPGP 179 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + DL A ++L + + GFD+F+ F H+ KL+MSR+D++DE+K +EGDPHVK Sbjct: 180 LLKMMTDLGFRAASAMILAQLVIAGFDIFWMRFRHISKLKMSREDLKDEYKNTEGDPHVK 239 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GR + ++ AAR+RMMA V A V+V NPTHY+VAL Y+ AP++VAKG VA RI Sbjct: 240 GRQKALRAKAARQRMMAAVKTATVVVTNPTHYAVALVYERGGGGAPRIVAKGMDDVAARI 299 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 R+I +N +P + PPLARAL+ + +IP + + VA ++A+VW+LKR Sbjct: 300 RDIAQDNRIPIVANPPLARALF-TLPLDSEIPAEHFKVVAAIIAYVWKLKRPASRSAP 356 >UniRef50_C8WYW8 Flagellar biosynthetic protein FlhB n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WYW8_DESRD Length = 354 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 121/353 (34%), Positives = 208/353 (58%), Gaps = 2/353 (0%) Query: 1 MSDESDD-KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+ + D+ +TE PT R + REEG++ +S+E+ + L+L + + ++ + L Sbjct: 1 MAQQGDEERTEEPTEKRRREFREEGKVAQSKEVNTALLLSTALLLWFWYAPNFVEGLERF 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L+ P ++G + + L L P++ ++V +S + G +FS K+ Sbjct: 61 LAGFWDQAGYWNVTPQAVVGWLGKGLIHLGLLLSPILILSIVVGFLSSYIQFGWLFSPKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 LQP KL+P+ G + S ++ ELLK++ K +VGSV + L H+ Q ++L+ + Sbjct: 121 LQPDIKKLDPIQGAAKFVSKRSAMELLKSLAKVAVVGSVAYWTLSDHFEQAIQLIGQPIE 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 L + ++ + D + + ++++M++++++DE K++EGDP + Sbjct: 181 RIFVFIGWTAAEILLKCCIALLFIAVIDFAYTKWEMEEQMKMTKKELQDEHKETEGDPQL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K R+R +QR AR+RMMA+VP+ADV++ NPTHY+VAL+YD + M AP+V AKG+ +VA R Sbjct: 241 KQRMRSIQRDMARKRMMAEVPQADVVITNPTHYAVALRYDRSSMEAPEVTAKGSNIVAQR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 IREI E+ VP +E PP+AR L+ E+G+ +P +Y AVAE+LA+V+ LK Sbjct: 301 IREIAEESGVPLVENPPVARVLHG-LELGETVPESMYKAVAEILAYVYSLKGK 352 >UniRef50_A1TJC2 Type III secretion protein, YscU/HrpY family n=5 Tax=Acidovorax RepID=A1TJC2_ACIAC Length = 352 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 111/353 (31%), Positives = 187/353 (52%), Gaps = 4/353 (1%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT +L+ AR++GQ +S++L + +L + V+ G L R+ +++ L Sbjct: 3 EKTEEPTAKKLKDARKKGQTTKSQDLVAGAVLGAALLVLTGAGPMLYDRVRRIVTTALEQ 62 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + + L+ + + M ++ VLVA+++ + G + + + L PKF Sbjct: 63 GVRVHSTQELLALLSSMA-LDGMAVAFGMVIVSVLVAVLALLPQVGFMITFEPLTPKFDS 121 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LNP G+K+MF+A++ E K++LK ++ G+V + P ++ + +P + A Sbjct: 122 LNPAEGLKKMFNARSLVEFAKSVLKAVVFGAVLWHIVTGLVPLLVGSVYLTPEASGQIAW 181 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 + L + + D Q + ++ RMS+ D++ E K SEGDPH+KG ++ + Sbjct: 182 SALLKLFSFAFLVFLVIGPLDFGLQHWLFMRDQRMSKDDVKRENKDSEGDPHLKGHLKSL 241 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 + A VP A V+V NPTHY+VAL+Y+ P VVAKG A IR + A Sbjct: 242 REEMATSPPQERVPGATVVVTNPTHYAVALRYEAGATPLPIVVAKGMDEQAAVIRGLAAL 301 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 +++P + PPLARAL++ + Q IP +L+ AV+ VL WV +L R L GG Sbjct: 302 HHIPLIANPPLARALHK-LPLDQPIPEELFEAVSVVLRWVAELDR--LGGGSP 351 >UniRef50_A1SEN0 Type III secretion exporter n=1 Tax=Nocardioides sp. JS614 RepID=A1SEN0_NOCSJ Length = 381 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 127/374 (33%), Positives = 198/374 (52%), Gaps = 5/374 (1%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + +K+E PT R ++ R+EGQ+PRS E+ + LL+ + +L + + Sbjct: 2 TGEKSEKPTAKRNKENRKEGQVPRSPEIGAWSALLLIAMFLPRLFGHEIDKLRELTTTMF 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 D + + + + +L L+ L +G+ +V + + GG + KS++PK Sbjct: 62 SSAADA--DAEIAVQLLGQGLWHVLLVLVVLGAGIAVVGIAGALGQGGFFLATKSVKPKL 119 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 SKLNPLPG KR+F + E K ++++ +V + + P + LM S + Sbjct: 120 SKLNPLPGFKRIFGPRALWEGTKMLIRSGIVALLVWLAVKSMLPLIGGLMPMSL--VLDQ 177 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 + + + + D Q KK RMS+ +++ E KQSEGDP +KG IR Sbjct: 178 FASHALSMIRNIAVAGVLLGAADYLVQRKLMGKKTRMSKDEVKQEHKQSEGDPLLKGAIR 237 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q AA+R RMMADVP ADV++ NPTH +VAL+Y+ + AP+VVA+GAG++A IRE Sbjct: 238 SRQLAASRNRMMADVPTADVVLVNPTHVAVALRYEPER-GAPRVVARGAGVIAAAIREKA 296 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQPT 364 E VP + PLARALY +GQ+IP +L+AAVA+VLA+V + GG+ + Sbjct: 297 TEARVPLVRDVPLARALYTSTTVGQEIPTELFAAVAQVLAFVLSRRAQGQHGGEHRTPRS 356 Query: 365 HLPVPEALDFINEK 378 +PE L + Sbjct: 357 VDELPEVLAAGRRR 370 >UniRef50_Q0G102 Flagellar biosynthesis protein B n=3 Tax=Rhizobiales RepID=Q0G102_9RHIZ Length = 362 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 110/353 (31%), Positives = 183/353 (51%), Gaps = 1/353 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S++ KTE PT ++ E+G +P SRE L L I RL L Sbjct: 4 SEDRSQKTEQPTEKKIRDTIEKGNLPNSREAPVLASFLAISLFIALQARESGYRLLTTLQ 63 Query: 62 AGLHFD-HSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + L + +L EA + L+P+ + + +++ V+ + + + Sbjct: 64 TTFDNPLQWELETSRDALHVLSVLSTEAAIFLVPVAIFLCIGGILASVLQNPPQVNFERI 123 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PK S ++P G+KR+F + E KA+ K +++G V G + + M++ M P+ Sbjct: 124 KPKASNISPASGLKRIFGPRGLTEFAKAVFKFLMIGVVVGTLIVSNLGTMIQTMLADPVQ 183 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 +DL V + I +V D+ + + MS+Q+I+DE KQ++GDP VK Sbjct: 184 VPELVLDLAMKLLSGVSIATIVLVAADIAMTRIHWRRDIMMSKQEIKDEHKQTDGDPMVK 243 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R +Q+ R +R+RM+A VP A +++ NPTHY++AL+Y + AP VVAKG LVAL+I Sbjct: 244 QRQKQIARERSRKRMIAAVPNATLVIANPTHYAIALRYKREEGGAPMVVAKGTDLVALKI 303 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 RE+ E +P +E LAR++Y H I Q IP + + AVAE++ ++ + + Sbjct: 304 REVAEEKEIPVIEDKLLARSMYDHVHIDQMIPPEFFKAVAEIIYYLHTREGSK 356 >UniRef50_C2KTQ0 Flagellar biosynthesis protein FlhB n=3 Tax=Mobiluncus RepID=C2KTQ0_9ACTO Length = 373 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 132/363 (36%), Positives = 198/363 (54%), Gaps = 5/363 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD S +KTE TPH L+K RE+G + +S++LT + L G +++ + + Sbjct: 1 MSD-SGEKTEKATPHHLKKVREDGGLQKSQDLTGWISLAAGAALLPSLMDTAGHNGREQI 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVF-SGKS 119 +A + + ILG + ++ + LLP + ++LVA++ ++ G VF S K Sbjct: 60 AAVRELVNGVSMTE--ILGFLGQSLQGVLWTLLPFMLAIMLVAVLVNIIQGKGVFPSAKH 117 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+PK LN + G+K++ Q LKA+LKT+ VG V + M S Sbjct: 118 LKPKLQNLNLVKGVKKIAGVQALWNGLKALLKTVAVGVVLYLIISGVMEIMGAAGHMSGR 177 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + D + L V+ I + D F + K+ +MS+Q++++E+KQ EGDP + Sbjct: 178 DLVNYGTDKMWLLIWASVIAGIVVSILDALFIFKKNQKQTKMSKQEVKEEYKQQEGDPQI 237 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K + R +R RMM D +ADV+V NPTHY+VAL+Y+ + APKVVAKG +A R Sbjct: 238 KSQRRSRALQMSRNRMMNDAAEADVVVVNPTHYAVALKYEPGQ-GAPKVVAKGVDHLASR 296 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IREI +N VP +E LAR LY AEIG +IP +LY AVA+VLA+ LK+ GG Sbjct: 297 IREIALDNRVPMVEDVALARTLYSTAEIGVEIPEELYTAVAQVLAFCLLLKKRGARGGIH 356 Query: 360 PVQ 362 + Sbjct: 357 KMP 359 >UniRef50_A0P0L7 Translocation protein in type III secretion n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P0L7_9RHOB Length = 371 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 90/349 (25%), Positives = 171/349 (48%), Gaps = 3/349 (0%) Query: 1 MSDE-SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS + + +KTE PT +L AR++GQ+ RS++L + + LL ++ +W + M Sbjct: 1 MSQQPTGEKTEQPTHKKLRDARKKGQVARSQDLVTTISLLGVIAYLWLAWDYNFAKFVEM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L + + + +++ +LPL+ + + G +F+ ++ Sbjct: 61 LDIVAALHGAGFR--ASAFNALQAMFDISIVVVLPLLGVGFALGIAGNYFQFGSIFAFEN 118 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+PK ++P G+K++FS + E LK+++K I + + F + M + Sbjct: 119 LKPKIENISPAKGLKKIFSVKQLVEFLKSLIKIIFLSVLLFFVIRDAIGPYMNAVQCGLQ 178 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 ++ L L + GFD FQ F H K+L M++ +++ E+K++EGDP + Sbjct: 179 CLTAVTSSMLLTTLLFTALAFAIVSGFDFIFQKFQHKKELMMTKTEVQREYKETEGDPLI 238 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGR +Q+ + + A ++ NPTH++V + Y + P +VAKG L A Sbjct: 239 KGRRKQLAQEMVLSDGIDRTRNATAVIVNPTHFAVVIDYKPDIAPLPLIVAKGRNLHAHD 298 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 +R ++ VP LAR+LY +++G +P + + +A++L WV + Sbjct: 299 LRTEAEKHGVPVFRNVLLARSLYAESDVGAFVPDEWFEVIAKILVWVDK 347 >UniRef50_D2S977 Type III secretion exporter n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S977_9ACTO Length = 377 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 128/380 (33%), Positives = 195/380 (51%), Gaps = 5/380 (1%) Query: 1 MSDES--DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+ + +KTE PTP RL+KAR+EGQIPR++EL + + ++ + ++ Sbjct: 1 MAKDGPGGEKTEDPTPQRLKKARKEGQIPRTQELGTWVGAAAASFLLPMLVRNAFDQVGA 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 M + + + + + LP+ +++V + + GG+ SGK Sbjct: 61 MFVQV--GAVVETPEVEAVTALLGQALDTFVTVALPMAVALMVVGVAASAAQGGVTVSGK 118 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 ++P KLNP PG+KRMF E KA++KT +G+V + A Sbjct: 119 PMKPTLKKLNPFPGMKRMFGGHGLWEATKAVIKTAALGTVVVVTSDRAQQLVSSAGALPL 178 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 D L +V + + + D +K+LRM++ +I+ E K SEGDPH Sbjct: 179 SAITATFTDSAVLMIRVVAVTGLVIAVADYVIVRKRTMKELRMTKYEIQQEHKNSEGDPH 238 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VK + R Q A +R RMMA+V ADV++ NPTH +VAL+Y+ ++ AP+VVAKGA VA Sbjct: 239 VKAQRRATQMAMSRNRMMAEVADADVLLVNPTHVAVALKYEPDR-GAPRVVAKGADEVAA 297 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 ++RE AE VP ++ PLARAL+ EIGQ++P QL+ AVA VLA+V QL + GG Sbjct: 298 KLRERAAEARVPLVQDVPLARALHASCEIGQEVPAQLFTAVARVLAFVMQLSARGVRGGF 357 Query: 359 RPVQPTHLPVPEALDFINEK 378 V + + Sbjct: 358 HRPGFAAPDVEDLPRAGARR 377 >UniRef50_Q0FML8 Flagellar biosynthesis protein B n=4 Tax=Rhodobacteraceae RepID=Q0FML8_9RHOB Length = 375 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 116/359 (32%), Positives = 202/359 (56%), Gaps = 8/359 (2%) Query: 1 MSD---ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M+D + D+KTE PT +L KARE+G + S+E +++ +L ++ F S++ L+ Sbjct: 1 MADQDEDKDNKTEEPTERKLRKAREKGDVASSKEAGNVMAVLSLFAITAFVLPSVSAPLA 60 Query: 58 GMLSAGLHFDHSIINDPN-----LILGQIILLIREAMLALLPLISGVVLVALISPVMLGG 112 G+ L + + + ++R + L PL++ +V+ AL + G Sbjct: 61 GVFRNVLESAGQVHVGTDLSGLRDLGAVSWKVLRGVGILLGPLMALMVIGALAGVALQGE 120 Query: 113 LVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMR 172 +V + + L+PK+SK++P+ G KR+FS E K++ K +LVG + G+ + + Q+ + Sbjct: 121 VVVASERLKPKWSKISPISGFKRLFSLAAFVEFFKSVTKVLLVGVIAGWVVLNAVGQIWQ 180 Query: 173 LMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQ 232 P L+ + V + D+ ++ F H +K RMS ++I+DE K+ Sbjct: 181 TQGLVPEMVTDFIRAEAARMLLITLALVSVIAVADILWKRFDHRRKQRMSMKEIKDEVKE 240 Query: 233 SEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 +EGDP ++ + ++R AR+R+ VP+A V++ NPTH++VAL+Y+ AP VAKG Sbjct: 241 TEGDPLIRSKRMNIRRERARQRLAQAVPRATVVLTNPTHFAVALKYENGVDMAPVCVAKG 300 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 A L+A RIRE+ EN +P +E PLARAL+ AE+ + IP + + AVA ++ ++ L+R Sbjct: 301 ADLLAARIRELAKENEIPMVENRPLARALHDVAELDRPIPVEHWEAVAAIIGYIMDLER 359 >UniRef50_A4TRY5 Type III secretion apparatus protein n=30 Tax=Enterobacteriaceae RepID=A4TRY5_YERPP Length = 355 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 95/357 (26%), Positives = 177/357 (49%), Gaps = 3/357 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +K E PTP RL++A+E+GQ+ +S E+TS + L+ V G SL + ++ + + Sbjct: 2 STEKNEKPTPKRLKEAKEKGQVVKSVEITSGVQLVALVIYFLLTGYSLVEQAKALIRSSI 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + + + M ++ L +++V +I+ + G + + K++ K Sbjct: 62 IQLQQPL--TLALARIGAECMTVLMHIVVVLGGALIVVTIIAGIAQVGPLLATKAVSFKG 119 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 ++NP+ K++FS ++ EL+K++LK ++ + G+ L + P L A+ Sbjct: 120 ERINPIQNAKQLFSLRSVFELMKSLLKVGVLTLIFGYLLMQYAPSFGYLTHCGSRCALPV 179 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 L+G ++ + D FQ ++ +K+L+MS +++ E+K S GDPH+K + R Sbjct: 180 FSTLMGWLLGSLIACYLVFSLMDYAFQRYTIMKQLKMSHDEVKREYKDSNGDPHIKQKRR 239 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q+Q +V ++ +V NPTH++V L Y + P V+ KG A I + Sbjct: 240 QLQHEVQSGSFATNVRRSTAVVRNPTHFAVCLIYHPEETPLPIVIEKGHDEQAALIVSLA 299 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPV 361 ++ +P +E LARAL+R G IP Q + VA +L +L ++ + P Sbjct: 300 EQSGIPVVENIALARALHRDVACGDTIPEQFFEPVAALLRMALELD-YQPSSDDPPR 355 >UniRef50_A5V2R9 Type III secretion exporter n=2 Tax=Sphingomonadaceae RepID=A5V2R9_SPHWW Length = 379 Score = 364 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 140/379 (36%), Positives = 210/379 (55%), Gaps = 7/379 (1%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ E D+KTEAPTP R + A E+G + +SREL + L+++VG I G L Sbjct: 1 MAEGPEDDEKTEAPTPKRRQDAAEKGDVLQSRELGTALVMVVGAGWIAIAGPWAMAALKR 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 MLS L FD I + + + + ++ L LL L + + A+ +P MLG L F Sbjct: 61 MLSNALSFDAGAIENFDPLSAAL-AMVATVALPLLLLFALTLAAAIAAPAMLGSLGFRWS 119 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +L K +KLNP+ G+KR+F Q EL K++LK + +G+V + L ++ + + Sbjct: 120 ALGFKANKLNPMAGLKRIFGMQGLIELGKSLLKILALGAVGYWLLMDRIAAIVTMGQQDL 179 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 TA+ + L++ L + + G DV Q+F K+LRMS+Q+I++E KQ+EG P Sbjct: 180 RTALDSLGSTFVFAVLVMTLALAVVAGADVPMQMFQRGKRLRMSKQEIKEESKQTEGSPE 239 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K IRQ Q AAA V +A V++ NPTH++VAL+Y +AP V+A+G G A Sbjct: 240 LKAAIRQKQMAAAMGSARKAVVEATVVLTNPTHFAVALRYRPGFDTAPVVLARGRGATAQ 299 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 IRE+ EN+VP L P L RA+Y + GQ I L+ AVA +LA+V+ L R G Sbjct: 300 AIRELATENSVPMLHYPQLTRAIYYTSRSGQVIREDLFIAVAAILAFVFNLDRAMAEGIA 359 Query: 359 RPVQPTHLPVPEALDFINE 377 +P + VP+ F E Sbjct: 360 QPE----VDVPQGARFDEE 374 >UniRef50_A6W8L6 Type III secretion exporter n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8L6_KINRD Length = 360 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 130/350 (37%), Positives = 191/350 (54%), Gaps = 7/350 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PTP +L++AR+EG IP SR++ + L G I +L Sbjct: 2 SGEKTEKPTPKKLKEARDEGNIPFSRDVAAWLSTGAGAVTI----PHTIESGQVLLRKAF 57 Query: 65 HFDHSIINDPNLILGQIILLIREAML--ALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122 ++ DP L A + L PL + V ++S + G L + K L+P Sbjct: 58 AGVGAVAADPEPARALAALAATFAGIPGVLGPLAAATVFAVVVSGGVQGTLRPAPKKLKP 117 Query: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182 KFS LNP+ G K+ + Q E K++LKT+++G+V + + PQ + + + Sbjct: 118 KFSNLNPVNGFKQHWGPQALWEGTKSLLKTVVIGTVMWLVVKNLVPQFVGSGLMPLASVL 177 Query: 183 GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242 V + VL + + D +KKLRMS+QDI+ E K +EGDP +KG Sbjct: 178 TLTKGAVVKIVAVTVLLGLIIAAGDYAMSYRRTMKKLRMSKQDIKMEHKNAEGDPLLKGA 237 Query: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 IR Q A +R RMM+DV ADV++ NPTH +VAL+Y+ APKVVAKGAG +A +IRE Sbjct: 238 IRSKQMAMSRNRMMSDVASADVVLVNPTHIAVALRYEPG-TGAPKVVAKGAGAIASKIRE 296 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 EN+VP ++ LAR +Y+ +IGQ+IP + +AAVA+VLA+V L+ Sbjct: 297 KAKENDVPLVKDVQLARTMYKSCKIGQEIPPEFFAAVAKVLAFVMNLRSR 346 >UniRef50_D2TZS1 Type III secretion inner membrane protein YscU,SpaS,EscU,HrcU,SsaU n=1 Tax=Arsenophonus nasoniae RepID=D2TZS1_9ENTR Length = 352 Score = 361 bits (927), Expect = 2e-98, Method: Composition-based stats. Identities = 99/350 (28%), Positives = 176/350 (50%), Gaps = 6/350 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ +KTE PT R+ +AR++GQ+ +S E+ ++L + V + + G +L + ++ Sbjct: 4 MA----EKTEKPTQKRMNEARKKGQVIKSNEIVTVLKMAVILGYLIVEGHALFNAIGELI 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L + I I + ++ L+ +++ +S ++ G +++ KSL Sbjct: 60 --ILTVRSLSLPIDVAAKTIIGSFIMLLLRFMVGLVVVLIVTICLSCIVQTGPIWAHKSL 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 F+K+N + K++FS + E K ILK I++ V + L ++ L Sbjct: 118 AFSFNKMNIIKNAKQIFSMKNLFEFGKNILKVIVLTLVFYYLLDYYVNLFQYLPTCGIDC 177 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + L+ ++ I D FQ + +K+L+MS++D + EFK +EG+P +K Sbjct: 178 GVMVTFTLIQWLWGGFLVCYIVFAIADYGFQYYHVMKELKMSKEDTKREFKDTEGNPQIK 237 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 + R++QR ++A+V K+ VI+ NPTH V L Y P+VV K +AL I Sbjct: 238 QKRREIQREITSNSVVANVRKSTVIIRNPTHIVVCLYYQPGITPLPQVVEKFQDNMALHI 297 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 ++ + +P +E LARAL++ E GQ IP L+ VAE+L V L+ Sbjct: 298 VKLAEKAGIPMVENILLARALFQQVETGQMIPESLFEPVAELLRLVMDLR 347 >UniRef50_C0GJG3 Type III secretion exporter n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJG3_9FIRM Length = 309 Score = 360 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 108/310 (34%), Positives = 175/310 (56%), Gaps = 1/310 (0%) Query: 41 GVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVV 100 ++ G L L+ + L D ++ P + + + L + P+ + + Sbjct: 1 MTALFMAVGQFLFNHLAQTMLRFLQMDGRLL-TPGNLNALTMRAFGDFFLFMAPVFAVSL 59 Query: 101 LVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTG 160 + L + G +F+ + L P+F++LNP G K++ S + EL K++LK ++VG V Sbjct: 60 IAGLAVNYLQVGFLFTTEPLNPQFNRLNPAEGFKKIASKRALFELAKSLLKVLMVGFVAF 119 Query: 161 FFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLR 220 F+ + ++ + + L AL + + + D +Q + H + L+ Sbjct: 120 LFVRGNLENLLATLYQDAAGVWETLRSLSLNLALRIGALFLVLSVLDYIYQRYEHNQNLK 179 Query: 221 MSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDE 280 MS+Q+I++E KQ EGDP +K ++R+ QR+ A +RMM DVP+A V++ NPT +VA++Y E Sbjct: 180 MSKQEIKEEHKQMEGDPQLKSQLRERQRSIATQRMMQDVPEATVVITNPTELAVAIRYRE 239 Query: 281 NKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVA 340 ++ AP VVAKGA L+A RIRE ENNVP +E P+AR LY EIGQ+IP LY AVA Sbjct: 240 DRDEAPTVVAKGAALMAKRIRETAKENNVPIMENKPVARMLYDQVEIGQEIPVDLYQAVA 299 Query: 341 EVLAWVWQLK 350 E+LA V++L+ Sbjct: 300 EILALVYKLR 309 >UniRef50_Q2SC29 Type III secretory pathway, component EscU n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SC29_HAHCH Length = 351 Score = 360 bits (924), Expect = 6e-98, Method: Composition-based stats. Identities = 99/352 (28%), Positives = 175/352 (49%), Gaps = 2/352 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 SD+KTE PTP +L AR++GQ+ S+++ S + ++ + LS ++ Sbjct: 2 SDEKTEKPTPKKLRDARKKGQVAHSKDVVSTATICAMFLLLLATSDTYLSHLSILIELPA 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + + ++ + +I E + L + V+ A+++ + G +F+ +SL+P Sbjct: 62 QYMDRPFLEALPMV--VDNVIYELIYLTLMPVGVVMASAILANFLQVGALFAVESLKPDL 119 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNP+ G K++F + E +K+++K ++ + + + RL Sbjct: 120 KKLNPVEGFKKIFCVKNFIEFIKSLIKVGVLSYLVYMLIKDNLNDSARLHYCEVECIPDF 179 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 L+ L + I + D F Q +K+ +MS+ +++ E+KQ EG P +KG+ + Sbjct: 180 VGTLLKQLILYSAITFIALAAADFFIQKQQFIKQQKMSKDEVKREYKQMEGSPEIKGKRK 239 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 Q+ R + A V K IV NPTH +V + Y++ PKV+ KGA +A IR+I Sbjct: 240 QIHREMMNTSIPAQVKKCSAIVTNPTHLAVGIYYEKGVEDVPKVMVKGADQMAKVIRKIA 299 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 E +P +E PLAR L++ A++ +P L+ AVA VL WV L + R Sbjct: 300 EEEGIPMMENVPLARGLWKRAQVNDYVPPDLFEAVAAVLQWVDSLDQQRQQR 351 >UniRef50_A8IPK5 Flagellar biosynthetic protein n=14 Tax=Alphaproteobacteria RepID=A8IPK5_AZOC5 Length = 359 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 118/351 (33%), Positives = 186/351 (52%), Gaps = 3/351 (0%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MSD++D KTE T ++ A E+G +P SRE LL + V+ F V+ R L+ Sbjct: 1 MSDDTDKESKTEEATERKVSDALEKGNVPYSRETALFASLLGILGVLTFFVVNPVRILTV 60 Query: 59 MLSAGLHFDHSIIN-DPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 L+ L + + ++ LLP + + L + + Sbjct: 61 ELTHFLDNPAGFTLAGSDDAIALAWGVLLLMGQVLLPAVLLLAAAGLAASLFQNTPRLVL 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 +QP+FS+++P+ G R+FS G E K+ K ++V + G L ++M M Sbjct: 121 NRIQPQFSRIDPMKGWTRIFSRDGGIEFGKSAFKLVVVAVICGVLLMSERDKVMNAMYSD 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 P+ + L V + I +V D+ + F +LRM++Q++++E KQ EGDP Sbjct: 181 PLLMPSVILSLATRLISAVCVATIVLVALDLVWSRFHWRAELRMTKQEVKEEMKQQEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 VK R+R + + AR+RMM+ VPKA ++V NPTHY++AL YD K AP+VVAKG L+A Sbjct: 241 MVKARMRSLAQQRARQRMMSSVPKATLVVANPTHYAIALYYDRQKGGAPQVVAKGTDLIA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 L+IREI ++P +E PLARA+Y E+ Q IP + Y VA++L +++ Sbjct: 301 LKIREIAERCSIPVIEDKPLARAMYDAVEVDQWIPPEFYKPVAKILYFIYS 351 >UniRef50_O54243 Flagellar biosynthetic protein flhB n=46 Tax=Rhizobiales RepID=FLHB_RHIME Length = 360 Score = 358 bits (919), Expect = 3e-97, Method: Composition-based stats. Identities = 114/350 (32%), Positives = 189/350 (54%), Gaps = 3/350 (0%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++E D KTEAP+ ++ A E+G +P SRE+T+ L + F A ++ Sbjct: 1 MAEEQDKDSKTEAPSEKKISDATEKGNVPFSREVTAFASTLAIYIFVVFFLSDGAANMAE 60 Query: 59 MLSAGLHFDHSI-INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 L + ++ + I ++ + +LP+ ++L + S + Sbjct: 61 ALKDIFEQPEAWRLDTATDAVALISHVVLKCAALVLPVFILLILFGVGSSIFQNLPRPVL 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 +QPK+++++P G KR++ Q E K++ K I+V V LW+ + + +M Sbjct: 121 DRIQPKWNRVSPAAGFKRIYGVQGLVEFGKSLFKIIVVSIVVVLVLWNDYFATLDMMFSD 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 P+T + + ++V+ + D+F+ +LRM+RQ+++DE KQS+GDP Sbjct: 181 PVTIFTTMISDLKQIIIVVLFATATLAIVDLFWTRHHWYTELRMTRQEVKDELKQSQGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 VK R+R MQR AR+RM++ VP+A +I+ NPTHY+VAL+Y + AP VVA G LVA Sbjct: 241 IVKSRLRSMQRDRARKRMISSVPRATLIIANPTHYAVALRYVREESDAPVVVAMGKDLVA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW 347 L+IREI +N +P E PPLAR+++ + IP Y AVAE++ V+ Sbjct: 301 LKIREIAEKNGIPVFEDPPLARSMFAQVSVDSVIPPVFYKAVAELIHRVY 350 >UniRef50_Q4JMS7 Predicted flagellar biosynthetic protein n=1 Tax=uncultured bacterium BAC17H8 RepID=Q4JMS7_9BACT Length = 385 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 117/384 (30%), Positives = 200/384 (52%), Gaps = 16/384 (4%) Query: 1 MSD---ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M++ + +KTE PT RL+KA EEG+I S+E+ L G+ + +A L Sbjct: 1 MAEENQDGQEKTEEPTQRRLQKAAEEGRILTSKEVMVFTTLAAGLVLFMGLSPFVASGL- 59 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 + D D ++ ++ +LA L + +++V +++ +GGL F+ Sbjct: 60 DAWGSLFRIDSGFNLDTLGLV-KVRYAFWLVILATLVVGMPLIVVIILTQAAVGGLNFAA 118 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 +++ K ++++P+ G+KR+FS + EL K++LK L+ + ++H PQ++ L + S Sbjct: 119 QAMNFKGNRIDPIAGLKRIFSVKGLVELAKSVLKVGLLFGIGALVIYHQLPQLVFLSSSS 178 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + A +++ ++ + D +Q +H + LRM+ ++++DE KQ+EG P Sbjct: 179 LSQGVNRAAQAFPFLVGGLLIALLVIAAIDYAWQKHTHTQSLRMTLKEVKDESKQTEGSP 238 Query: 238 HVKGRIRQMQRAAARRRMMA-----DVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKG 292 V+ +IR+MQ A+ +V A +V NPTH++VAL+Y + AP V+A G Sbjct: 239 EVRAKIRRMQYQQAQESSRQREALGNVGDATTVVTNPTHFAVALKYAAGQEGAPVVLAMG 298 Query: 293 AGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 G +A++I E E V TL P LARALY +EIG +I LY AVA VLA+V++L Sbjct: 299 RGQMAMQIIERAKEARVRTLRIPMLARALYFTSEIGGEITEGLYNAVAVVLAYVFRLDSG 358 Query: 353 RLAGGQRPVQPTHLPVPEALDFIN 376 + L +P L F Sbjct: 359 ET------MDMPELTLPPELRFDE 376 >UniRef50_B2IK02 Flagellar biosynthetic protein FlhB n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IK02_BEII9 Length = 360 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 106/349 (30%), Positives = 184/349 (52%), Gaps = 3/349 (0%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ + D +TE PT +++ A E+G +P SRE+ +L + V F + + Sbjct: 1 MAEKPDQDSQTEEPTAKKMDDAIEQGNLPISREMIIFASMLSLLIVNAFILRNSLADIVT 60 Query: 59 MLSAGLHFDHSI-INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 +L + I + + + L++ E L+P+I ++ + + + L Sbjct: 61 LLKYVFNNSDQIPLRNQLDAVNLFQLILTETGPRLVPIILPFMIAGIAANIGQSKLRLIL 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 + +QP F L+ + G K++F + AE LK ++K V + L + +++ M Sbjct: 121 ERIQPDFGHLSLISGWKKLFGQKNLAEFLKNVIKLSAVALLLFMVLKGNQDKLINAMFLD 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 P + L ++ + I + D+ + + LRMS+Q+I+DE KQ EGDP Sbjct: 181 PSAIPELILSLSMRLLSVICIVTIVLATADLLWVKNQWRRDLRMSKQEIKDELKQMEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K R+R + R+ M+ADVPKA V++ NPTH++VAL+Y + P VVAKG L+A Sbjct: 241 LIKARLRSVALDRIRKSMIADVPKATVVIANPTHFAVALRYVREEGGTPVVVAKGTDLIA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 L+IREI +N+P +E PLAR+L+ E+ Q IP + Y A+AE++ ++ Sbjct: 301 LKIREIAEAHNIPIVEDRPLARSLHASVEVNQAIPAEFYRAIAEIIHYL 349 >UniRef50_Q9ZL73 Flagellar biosynthetic protein flhB n=16 Tax=Helicobacteraceae RepID=FLHB_HELPJ Length = 358 Score = 356 bits (915), Expect = 6e-97, Method: Composition-based stats. Identities = 113/356 (31%), Positives = 192/356 (53%), Gaps = 4/356 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M++E +KTE P+ +++KAREEG +P+S E+ L LL G+ I+ + S M Sbjct: 1 MAEE--EKTELPSAKKIQKAREEGNVPKSMEVVGFLGLLAGLMSIFVFFIWWVDGFSEMY 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L D S+ + L ++ L LLP++ +++VA +S V+ G +F+ K + Sbjct: 59 RHVLK-DFSLDFSKESVQELFNQLAKDTFLLLLPVLIILMVVAFLSNVLQFGWLFAPKVI 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PKFSK+NP+ G+K +FS + + LK L + F ++ + Sbjct: 118 EPKFSKINPINGVKNLFSLKKILDGSLITLKVFLAFFLGFFIFSLFLGELNHAALLNLQG 177 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + ++ + D+ + + L+M++Q+++DE+KQ EG+P +K Sbjct: 178 QLLWFKSKALWLISSLLFLFFVLAFVDLIIKRRQYTNSLKMTKQEVKDEYKQQEGNPEIK 237 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +IRQM A +MM ++PK++V+V NPTHY+VAL++D + P VVAKG +A+RI Sbjct: 238 AKIRQMMVKNATNKMMQEIPKSNVVVTNPTHYAVALKFD-EEHPVPVVVAKGTDYLAIRI 296 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 + I E+++ +E LAR LYR ++ IP +L+ AVA V A V +L++ R Sbjct: 297 KGIAREHDIEIIENKTLARELYRDVKLNATIPEELFEAVAIVFAQVAKLEQERQKQ 352 >UniRef50_A3SFT1 Flagella-associated protein n=2 Tax=Sulfitobacter RepID=A3SFT1_9RHOB Length = 375 Score = 356 bits (915), Expect = 6e-97, Method: Composition-based stats. Identities = 111/374 (29%), Positives = 196/374 (52%), Gaps = 7/374 (1%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRE----LTSLLILLVGVSVIWFGGVSLAR 54 M++ SD +KT PT +L+ AR++G +P S+E + + +L + V+ + + Sbjct: 1 MAENSDSTEKTLEPTEKKLKDARKKGDVPSSKETGNMVVVVAMLGIAALVLPYQAPQIVV 60 Query: 55 RLSGMLSAGLHFD-HSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGL 113 LS +L + + + + + A+LP+ + L I V+ G Sbjct: 61 ALSVLLDHSPNLMVATGEPGVIRLGQIMSEFFYMIVWAVLPIFGVLFLGGAIGAVIQGET 120 Query: 114 VFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL 173 V + + ++PK SKL+PL G+KR+FSA E K+I+K + +G + +F ++ Sbjct: 121 VVAAERIKPKLSKLSPLEGLKRLFSANALVEFAKSIVKVLAIGGLAVWFTNEAVRRIWTS 180 Query: 174 MAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQS 233 P G + + ++P+ D+ ++ F +K RMS++DI+DE K+S Sbjct: 181 SGFIPEHLPGYLTAAAVKLLIAAAILLVPIAIADILWRRFDWRRKQRMSQKDIKDEHKES 240 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EG P ++ + + +R +++R + VP ADVI+ NPTHYS+AL+YD + AP +AKGA Sbjct: 241 EGSPEIRQKRARRRRELSQQRTITAVPLADVILTNPTHYSIALKYDPAQDMAPVCIAKGA 300 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +A RIRE+ AE+++P +E PL R LY ++ Q IP + VAE++++V+ L+ + Sbjct: 301 DHLARRIREVAAEHDIPMIENKPLTRMLYDEIDVDQVIPVAHWEIVAEIISFVFDLRNNK 360 Query: 354 LAGGQRPVQPTHLP 367 + P Sbjct: 361 KRAAPQGSTLRTDP 374 >UniRef50_Q84CR0 Putative type III secretion protein n=3 Tax=Bordetella RepID=Q84CR0_BORPE Length = 349 Score = 356 bits (914), Expect = 8e-97, Method: Composition-based stats. Identities = 99/344 (28%), Positives = 169/344 (49%), Gaps = 2/344 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PTP RL +RE+G++ SR+ T ++ S+ L ++ A Sbjct: 2 SGEKTERPTPKRLRDSREKGEVAHSRDFTQTALICALFGHFLINAPSILASLRALILAPA 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F + + ++ +A+ L PLI V+ V + + + G+V + + L+P Sbjct: 62 AFADQGF--AVALGPVLTEILDQAVRVLAPLILIVLGVGMFAEFLQVGVVLAFRKLKPSA 119 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KLNP +K +FSA+ E +K++ K + + + + +M + Sbjct: 120 EKLNPAGNLKNIFSARNLMEFIKSVCKILFLAVLVTLVIRDSLQPLMAVPHSGLDGLRTG 179 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 ++ + + L + D+ +Q + + K LRMS+ +++ E+K+ EGDPH+K + + Sbjct: 180 VGRILQVMVWNIGLAYGAISLADLAWQRYQYRKGLRMSKDEVKQEYKEMEGDPHIKQQRK 239 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + + A V +A V+V NPTH +VAL Y + P+V+A G G VA + E Sbjct: 240 HLHQELIMHGAAAQVRRATVLVTNPTHLAVALYYAAGETPLPRVLAMGQGAVAALMVEAA 299 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 + VP ++ LARAL+ AE+ Q IPG+L VA VL V Q Sbjct: 300 RDAGVPVMQNVALARALHDQAEVDQYIPGELVEPVAAVLRAVRQ 343 >UniRef50_Q1MQX2 Translocation protein in type III secretion n=6 Tax=Desulfovibrionaceae RepID=Q1MQX2_LAWIP Length = 360 Score = 356 bits (914), Expect = 9e-97, Method: Composition-based stats. Identities = 101/356 (28%), Positives = 180/356 (50%), Gaps = 2/356 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS +S DKTE PTP +L +ARE+G + +S+++ + + + + L ++ Sbjct: 1 MSGDSGDKTEPPTPKKLREAREQGDVAKSQDVAAAMTMFGASLYFIGMWQDVFSNLLNLI 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 F H + I + A L+P+I+ ++ +A+ + +M G++FS KS Sbjct: 61 ELPTKFIHLPFE--EALPATISGIASIAFSILIPIIATLMFLAVAADLMQIGVLFSVKSA 118 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK LNP ++FS + E +K ILK ++ L ++ ++ + + + + Sbjct: 119 IPKLDNLNPKKWFSKVFSIKNLGEFVKNILKVSVLTITVWIILSNYIKELFAIASGNIWS 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 ++ L V + + D FQ + + K+ MS+Q+I+ E+K EGDP +K Sbjct: 179 LWYILGSVLRDLTLSVSMVFSVIACIDFMFQKWQYNKRQMMSKQEIKQEYKDMEGDPLIK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G+ +Q+ + A + + V KA V+V NP HY++A+ Y++ + P ++AKG GL+A R+ Sbjct: 239 GKRKQLHQEMAMQNPVNKVRKAKVVVVNPIHYAIAIDYEKGRTLLPVILAKGEGLLAQRM 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 + E +P ++ PLA +L+ IP L A VAEVL WV L + + Sbjct: 299 VAVAQEEGIPVMQNIPLAHSLFMDGIEDSYIPRNLIAPVAEVLRWVNSLNKNMIHK 354 >UniRef50_P96069 Secretion system apparatus protein ssaU n=35 Tax=Enterobacteriaceae RepID=SSAU_SALTY Length = 352 Score = 355 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 103/352 (29%), Positives = 174/352 (49%), Gaps = 10/352 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS +KTE PT +L R+EGQ+ +S E+TSL L+ ++ ++ +L Sbjct: 1 MS----EKTEQPTEKKLRDGRKEGQVVKSIEITSLFQLIA----LYLYFHFFTEKMILIL 52 Query: 61 SAGLHFDHSIINDP-NLILGQIILLIREAMLALLPLISGVVLVALISPV-MLGGLVFSGK 118 + F ++N P + L Q+ + E++ + L + V+VA + V + G+V + K Sbjct: 53 IESITFTLQLVNKPFSYALTQLSHALIESLTSALLFLGAGVIVATVGSVFLQVGVVIASK 112 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 ++ K +NP+ K++FS + EL K+ LK I++ + FF +++ L Sbjct: 113 AIGFKSEHINPVSNFKQIFSLHSVVELCKSSLKVIMLSLIFAFFFYYYASTFRALPYCGL 172 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + L+ + V++ I + D FQ + K L+MS+ D++ E K EGDP Sbjct: 173 ACGVLVVSSLIKWLWVGVMVFYIVVGILDYSFQYYKIRKDLKMSKDDVKQEHKDLEGDPQ 232 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K R R+MQ + V ++ +V NPTH +V L Y M P+V+ KG+ A Sbjct: 233 MKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQAN 292 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 I I N +P +E LAR+L+ E G +IP L+ VA +L V ++ Sbjct: 293 YIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVAALLRMVMKID 344 >UniRef50_D0DA90 Flagellar biosynthetic protein FlhB n=1 Tax=Citreicella sp. SE45 RepID=D0DA90_9RHOB Length = 365 Score = 355 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 109/358 (30%), Positives = 178/358 (49%), Gaps = 3/358 (0%) Query: 1 MS-DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+ D+ DKT P+P +LE+AR +G+IPRS ++ + L ++ G Sbjct: 1 MAEDDGGDKTHEPSPRKLEEARRKGEIPRSPDMLTAACYLGMLATGLALGGGSVMGFGNA 60 Query: 60 LSAGLHFDHS--IINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 L + + ++ ++ A+ +LP + L L++ GLVF+ Sbjct: 61 LLPLIEQPDRLVPLFFNDMASAPSGGILLAAITPVLPWLGVPALAVLLTLFATRGLVFTA 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 L K S+L+P+ K F + E +K++ K +L + GFFL ++ + S Sbjct: 121 SKLSLKASRLSPVENAKNKFGRRGLFEFVKSLAKLVLYSVLLGFFLSTRLDEIAGIGRSS 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 A DL+ + + + + D +Q H+++ RMS++++RDE+K++EGDP Sbjct: 181 AHEATALMADLMLRLLGIAAMIAVGLGTIDYLWQRAEHMRRNRMSQKELRDEYKEAEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 K R + A RMM DVP ADV++ NPTHY+VAL++ AP VAKG +A Sbjct: 241 MFKQHRRARAQEIAMNRMMVDVPDADVVIVNPTHYAVALKWSRQPGEAPVCVAKGVDEIA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 RIREI A++ VP PP ARA++ EIG QI + Y VA + + +++ Sbjct: 301 RRIREIAADSGVPIHSDPPTARAIHATTEIGDQIAAEHYRPVAAAIRFAEDMRKQMRR 358 >UniRef50_O67813 Flagellar biosynthetic protein flhB n=1 Tax=Aquifex aeolicus RepID=FLHB_AQUAE Length = 350 Score = 355 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 117/352 (33%), Positives = 194/352 (55%), Gaps = 5/352 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M++E KTE TP++ K REEG + +S E+ S L++L+ + ++ F G +A+ + + Sbjct: 1 MAEE--HKTERATPYKRRKVREEGNVAKSHEIASSLVVLLSLLLLLFLGTYIAKEVILIF 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 A + H+ I++ + + L PL +LV ++S V G +F+ K L Sbjct: 59 LAVTGYVHADISELGSLYENFYE---NIVKVLTPLFFLALLVVILSHVAQFGFIFTLKPL 115 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 K+ ++NP GIKR+ S T E +K LK L+ + F L + Sbjct: 116 SFKWERINPFEGIKRLISLTTLFETVKNTLKAFLLIGIAVFVLKGSLYFFLSSSTYPLAE 175 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + + + + + + + D F+ + + KK+ MSR+++++E+KQ EG P VK Sbjct: 176 TLKSFIKTSAITLITLGVVALLIAFLDYAFKRWQYEKKIMMSRRELKEEYKQLEGHPEVK 235 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RI+ R A+ RMMA+VPKA V++ NPTH ++AL+Y+ K AP VVAKG G +A +I Sbjct: 236 SRIKARMRELAKSRMMAEVPKATVVITNPTHIAIALKYNPEKDKAPVVVAKGKGTIAQKI 295 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 EI ++P + P LARALY E+G++I + Y AVAE++A+V K+ Sbjct: 296 VEIAENYSIPVVRKPELARALYPAVEVGKEISPKFYKAVAEIIAYVMFKKKK 347 >UniRef50_B7QTP8 Type III secretion exporter n=1 Tax=Ruegeria sp. R11 RepID=B7QTP8_9RHOB Length = 360 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 112/358 (31%), Positives = 178/358 (49%), Gaps = 3/358 (0%) Query: 1 MS-DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS D+ DK+ PTP ++ KARE+G +P+S +L+ L + V++ G + R + + Sbjct: 1 MSQDDDSDKSYEPTPEKIRKAREKGDVPKSTDLSVAAAYLGLIIVVYTSGEDMVRDMGSL 60 Query: 60 LSAGLHFD--HSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 + + L H+ + + + L++ A+ P+ ++S V LVF+ Sbjct: 61 MMSFLDQPDRHAELFFSDNGTPPVGGLLKSVASAMAPMFIIPAAAVILSLVGQRALVFAP 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 L+PK S+++ + K F E K+ +K IL G +L + P M+ A Sbjct: 121 SKLEPKLSRISIMSNAKNKFGMTGLFEFAKSTVKLILFSVCMGIYLNYRLPDMIASAATG 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + L +L ++ + + D FQ +K MSR++I DE K SEGDP Sbjct: 181 AFVVVTMLGQLAIEFMVLALIIALAVGVVDAAFQQADFTRKNMMSRKEIMDEMKNSEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 H+KG RQ + A + DV ADV++ NPTHY+VAL++D AP V+KG VA Sbjct: 241 HMKGARRQKAQQIAMSAGVQDVATADVVIVNPTHYAVALKWDRQPGQAPVCVSKGVDEVA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 IRE+ EN VP PP ARAL+ EIG +I + YA VA + + ++++ Sbjct: 301 AIIREVANENGVPIHSDPPTARALHAAVEIGDEIHEEHYAPVAAAIRFAEKMRQRAKG 358 >UniRef50_C6HWM0 Flagellar biosynthetic protein FlhB n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWM0_9BACT Length = 365 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 131/366 (35%), Positives = 202/366 (55%), Gaps = 8/366 (2%) Query: 1 MSD---ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M+D + + E PT RLEKAREEGQ+ RSRE+ L + ++ G L L Sbjct: 1 MADNENDGQLRQEEPTSRRLEKAREEGQVARSREVGYFFFLAASLILMASYGSRLVEGLR 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 +S L I P+ I + L+ M PL+ G ++ + + ++ GG++ S Sbjct: 61 DDMSYYLRHSGEISLTPDGITPFVKGLVLHEMGRTFPLLGGFLVFGVAAYIVQGGILVSP 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 K+ K+++++P GIKR+FS + ELL+ +K ++ + + L W + LM Sbjct: 121 KAAAIKWNRVSPSQGIKRLFSWRALEELLRYTIKVVVSLLILFYALKQDWMTLPALMETG 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 +G + + + + D FQ F ++ LRM+R +I++E K++EGDP Sbjct: 181 AHRMVGALYHFTFVVLVSFLPLYAALAIGDYLFQRFMMMRGLRMTRTEIKEETKETEGDP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 HV+ RIR +QRA ARRRMM+ + A V++ NPTH++V L+Y M+AP VVAKGA VA Sbjct: 241 HVRARIRSIQRAMARRRMMSKIKDATVVITNPTHFAVVLKYHPESMAAPVVVAKGADEVA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 RIREI E VP +E PP AR L+R + ++IP Y AVA +L+ ++Q +GG Sbjct: 301 FRIREIAREVGVPVVEDPPTARGLFRECPLDREIPFTFYEAVARILSILYQ-----RSGG 355 Query: 358 QRPVQP 363 Q P++P Sbjct: 356 QVPLRP 361 >UniRef50_A1UTV9 Flagellar biosynthetic protein FlhB n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UTV9_BARBK Length = 356 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 118/354 (33%), Positives = 188/354 (53%), Gaps = 4/354 (1%) Query: 1 MSDESDDK---TEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 MSDE DK TE PT H++ KA E+G +P SREL L L+ + F LS Sbjct: 1 MSDEKPDKESQTEEPTEHKIHKAEEKGNLPFSRELPILASLMSFSLITIFVAFPAMSNLS 60 Query: 58 GMLSAGLHFDHSI-INDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFS 116 L+ L S IN + I L+ LAL L+ + L+++ + + Sbjct: 61 RFLTEWLERPESWHINTAEDVKHLIYLVGGNLGLALAALLIIIPLISIAASAIQNAPRIV 120 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 + + PK+S+++P G R+F E LK+++K I V + + + + + Sbjct: 121 TERISPKWSRISPANGFGRIFGKAGFIEFLKSLVKLIGVSIIVYIMFFKNNTIFINALLT 180 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 + +L ++ V + GFD+ + F ++LRM++Q+++DE+K EG+ Sbjct: 181 DAPALPEYIRQKLVDLSLSFIVAVAIIAGFDLAWSRFYWRQQLRMTKQEVKDEYKNLEGN 240 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P VK R+R + R RR+M+A+VP A +IV NPTH+SVAL+Y AP V+AKG ++ Sbjct: 241 PMVKSRMRSLARDRIRRKMIANVPTATLIVTNPTHFSVALRYKPPLDHAPVVIAKGQDIL 300 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 AL IREI ++++P +E PLARALY+ E+ Q IP + Y VA ++ ++ K Sbjct: 301 ALHIREIATKHDIPIIEDQPLARALYKQVEVDQTIPPEFYEGVAALIRFINSQK 354 >UniRef50_D0MGA4 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGA4_RHOM4 Length = 360 Score = 354 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 112/355 (31%), Positives = 198/355 (55%), Gaps = 1/355 (0%) Query: 4 ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAG 63 + D K PTP RL+KAREEG + RS+E +++L+LL G+ + + + Sbjct: 3 DRDQKQFDPTPRRLQKAREEGNVFRSQETSAVLLLLGGLLTLALSLPYAYGLMRQFTART 62 Query: 64 LHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPK 123 L ++G + + L+P + ++++A V G + K L PK Sbjct: 63 LMSAPFYPLTSGSVIGALQEALMVLGRLLVPFFALLLVIAFGVNVWQTGWHPTLKPLLPK 122 Query: 124 FSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMG 183 +++PL G++R+FS++ +LKA+LK +VG + ++ H P+++ L S + Sbjct: 123 PERISPLRGLQRLFSSRGLFNVLKALLKIAIVGPIAFLVIYRHLPEILELHTHSLEAILQ 182 Query: 184 NAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRI 243 + A + ++ + D ++ + + + L+M+ Q+++DE +++EGDP VK R Sbjct: 183 ATGLWMLQLAAYTLGALLLLSAADFAYEKWKYRQDLKMTAQEVKDEHRETEGDPMVKSRR 242 Query: 244 -RQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 ++ + A RRR+ V ++DV++ NPTHY+VAL+YD ++ AP+V+AKG ALRIR Sbjct: 243 LKKARELARRRRLDHAVLRSDVVITNPTHYAVALRYDPSEAPAPRVLAKGIRKRALRIRA 302 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 + E+ +P +E PPLARALY + Q+IP +LY AVA +LA +++ + + G Sbjct: 303 LALEHGIPVVEDPPLARALYHNVPEEQEIPEELYLAVATILAEIYRQRGQQPPGA 357 >UniRef50_A8EW41 Flagellar biosynthetic protein FlhB n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EW41_ARCB4 Length = 349 Score = 354 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 121/353 (34%), Positives = 199/353 (56%), Gaps = 4/353 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D+ ++KTE PT +LE A+ EG + +S E+ IL G + F S + ++ Sbjct: 1 MADD-EEKTEEPTSKKLEDAKNEGNVSKSMEVVGASILTFGSIFLLFFSGSSMLEIKKLM 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 +F ++ P ++ + AL PL V+L+ L+ G + L Sbjct: 60 MLSYNFIGQEMDGPLY-YAITYTVVITLLKALAPLFILVILLGLVGNWAQFGFI--SIPL 116 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + KL+P+ G+K +F + E LK LK ++ +V + + + +M + + Sbjct: 117 KFDLQKLDPIKGLKNIFGLKKLLEALKLSLKLAIIITVMFIIFSLTYNEFLAMMNKETMA 176 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + L ++ +I D +F + ++K L+MS+Q+I+DE+K EGDP VK Sbjct: 177 TISSMLQLTIYFIFTILFIIIIFAIMDFYFSKYYYMKSLKMSKQEIKDEYKNMEGDPQVK 236 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GRIR++Q A++RMM +VP ADV++ NPTHY+VAL+YD SAP +VAKG +AL+I Sbjct: 237 GRIRRIQMQMAQKRMMGNVPNADVVITNPTHYAVALKYDNKVNSAPVLVAKGIDFLALKI 296 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 ++I ENNV +E P LARALY E+ ++IP Q Y A+AE+ +++++LKR R Sbjct: 297 KDIAKENNVTIIENPALARALYDQIEVDKEIPNQFYKAIAEIFSYLYELKRKR 349 >UniRef50_D2NZE2 Flagellar biosynthesis protein FlhB n=21 Tax=Listeria RepID=D2NZE2_LISMO Length = 348 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 107/353 (30%), Positives = 183/353 (51%), Gaps = 6/353 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ ++ KTE TP R++KAR EG + +S+EL + LL+ +++F G + Sbjct: 1 MAKDN--KTEKATPRRIKKARNEGNVAKSKELNNAFSLLIVAGLLYFFGEMFIKNTIQAF 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 A L + N + + + E L+P++ VV+ L++ + G++FS K++ Sbjct: 59 VALLKQPPKLAN----MESYSLFYLMEFGKVLMPIMVMVVIFGLMNYGVQVGILFSAKAV 114 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +P+F +LNP KR+FS + E++KA+L L+ V H ++ ++ + Sbjct: 115 KPQFKRLNPANYFKRVFSVKGIVEVVKALLLITLLSYVAYIGFRDHLDTLISYTGQNWLY 174 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 ++G L L + L + + D F+Q + + K LRMS+Q+I+DE K SEG P VK Sbjct: 175 SLGQIFALFKNEFLALFLVIAVIGLLDFFYQRYDYKKGLRMSKQEIKDEMKDSEGRPEVK 234 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R R + R + + + A +VNNPTH SV ++YD+ K APK++ KG +AL I Sbjct: 235 QRQRSIARGLLQGSITKKMADATFVVNNPTHISVVMRYDKTKDHAPKLLVKGEDELALFI 294 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 R++ + VP + LAR++Y + I LY V EV+ + + + Sbjct: 295 RQVADTDGVPMITNRQLARSIYYTTNPDEYIQEDLYKDVIEVMKELMDADKIK 347 >UniRef50_B1ZR29 Type III secretion exporter n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZR29_OPITP Length = 367 Score = 354 bits (908), Expect = 4e-96, Method: Composition-based stats. Identities = 104/353 (29%), Positives = 180/353 (50%), Gaps = 1/353 (0%) Query: 1 MSD-ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M++ + D KTE P+ +L +A + GQ RS EL L +L+ ++ + F +R ++ Sbjct: 1 MAEHDQDQKTEQPSEKKLSEAMDRGQFARSPELAVLFLLVAVLAALSFSVREASREVATY 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 ++ S+ + + I + + AL PL+ V+ AL++ + G + ++ Sbjct: 61 AASLFSRFGSMKVEHDTIRAYFGEAMLTSGTALAPLLLACVVAALLAGGVQSGFRLTPEA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 K +LNP+ G KR+F+ +LK + +G+ + Sbjct: 121 FGFKPERLNPVEGFKRVFNKSALVRAGVDLLKLVALGAALYLGARGLMMDPLFSAPVEAA 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 D + ++L + + ++ F + L M+RQ+++DE K EG Sbjct: 181 YLGQFLTDATYVFLSRLILALGVITAISYSYEKFKTHRDLMMTRQELKDEHKNQEGSSQA 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +R+M R +R+MM+ VP ADV+V NPTH++VAL+Y+ K +AP V+AKG A R Sbjct: 241 KMAMRRMARRLTQRQMMSAVPTADVVVTNPTHFAVALKYERGKDAAPVVLAKGENRFAQR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 I+ I AE+ VP +E P+AR L+ ++G+ IP +LY AVA +LA V++ R+ Sbjct: 301 IKAIAAEHGVPMVENKPVARLLFSMGKVGEAIPPELYQAVASILAVVYRTHRY 353 >UniRef50_C6NYG2 Flagellar biosynthesis protein FlhB n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYG2_9GAMM Length = 380 Score = 353 bits (907), Expect = 6e-96, Method: Composition-based stats. Identities = 118/372 (31%), Positives = 195/372 (52%), Gaps = 5/372 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ +++KTE + RL+ A+++G++PRS++ T+ L+L +++W S + + Sbjct: 1 MSE-AEEKTEKASQKRLDDAKKDGKVPRSQDWTASLVLFAATALLWAASGSWGTEILSRM 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 GL I+ + L +++ A+ S +++GG V+S L Sbjct: 60 VVGLSVSSLHFR--ADWQRTILQEAAPLFVVFLMFGGVILVSAIASILLVGGWVWSPGKL 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 ++ +L+ G+KR F+ + + L + +KT L+G G +W L+ P Sbjct: 118 W-EWDRLSWTSGLKRPFTKKGFSVLWEDSVKTGLLGVCMGLIVWGQKGVWFALLDIPPRR 176 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ ++ + ++ D F Q L+ +MS+QDI+DE K+ +G+P +K Sbjct: 177 AISLGAAILVKDFFIFASLLLVPGAIDWFLQRRFFLESQKMSKQDIKDEHKEVDGNPLIK 236 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIR++QR AR RMM V KA V++ NP HY+VAL+Y M+ P V AKG +AL+I Sbjct: 237 SRIRRLQRRIARMRMMKSVEKASVVLINPEHYAVALRY-TESMTVPIVTAKGIDTIALKI 295 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 REI + VP LEAP +AR+LY+ +IG IP LY AVA VLA++ L ++ P Sbjct: 296 REIAKIHGVPILEAPSMARSLYKVCDIGDLIPAGLYEAVAIVLAYIDHLHEAKIGNKPLP 355 Query: 361 VQPTHLPVPEAL 372 H + + L Sbjct: 356 KDWEHTGLGKRL 367 >UniRef50_B1LWT8 Flagellar biosynthetic protein FlhB n=8 Tax=Methylobacterium RepID=B1LWT8_METRJ Length = 355 Score = 352 bits (905), Expect = 9e-96, Method: Composition-based stats. Identities = 115/343 (33%), Positives = 189/343 (55%), Gaps = 1/343 (0%) Query: 12 PTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSII 71 P+ RL++A E G + S E+ + +L + ++A L L A L H++ Sbjct: 14 PSQRRLDQAIERGDVATSTEINTFAMLGAFTLALLVAAPTIATNLLHGLKAYLANAHALP 73 Query: 72 NDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLP 131 +D + + + + A+ + V+ L + ++ LVFS ++L PKFS+L+P+ Sbjct: 74 DDAAAMKAAMTRGLWLWLQAVAVPVGLAVVAGLAAGLLQHPLVFSAETLMPKFSRLSPMA 133 Query: 132 GIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGL 191 G+KR+ + + K + K VG V LW+ ++ P +M + L Sbjct: 134 GVKRLLGVEALFQFGKGLAKIAAVGVVGAVMLWNDRDRLEVFARLDPAASMPAILSLSLK 193 Query: 192 CALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAA 251 ++ + + D + F K+ RMS+++++ E K+SEG+P VKGR++Q++ A Sbjct: 194 LLAGMLCMHLAITLGDALYARFRWRKRHRMSKEELKQEMKESEGNPEVKGRLKQLRMARV 253 Query: 252 RRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPT 311 ++RMMA VP A V+V NPTHY+VAL+Y+ M+AP VAKG +ALRIR + AE+ V Sbjct: 254 KKRMMAAVPTATVVVTNPTHYAVALRYETG-MAAPVCVAKGVDALALRIRAVAAEHGVAV 312 Query: 312 LEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 +E PPLARAL+ EI ++IP + Y AVAEV+ +V +L+R Sbjct: 313 IENPPLARALHATVEIDREIPAEHYRAVAEVIGFVLRLRRRAA 355 >UniRef50_Q2RQH7 Flagellar biosynthetic protein FlhB n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQH7_RHORT Length = 356 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 129/356 (36%), Positives = 212/356 (59%), Gaps = 1/356 (0%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D+ D KTE P+ +L KARE+GQ+ +S+E+ S L+L + ++ G +A +++ Sbjct: 1 MADDDKDSKTEDPSSRKLGKAREDGQVAQSQEVKSFLMLGGALFMVAVMGGWIADKVALR 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + L + D + + L+ + L L I+ +++A++ V GL+FS K Sbjct: 61 VRVFLEQPDTFHLDAVGLRDLLARLLLDIGLVLAMPIAMFIVLAILGGVGQFGLIFSAKK 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 + P+ K++PL G KR+FS + E +K I+K ++V ++ + M + + Sbjct: 121 ITPELQKISPLAGFKRLFSVRALVEGVKGIVKVVVVSAIVAALMLPRLRTPELFMDQDIL 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 +G L+ + + VV V + D FQ + H+++L+M++Q+++DE K +EGDP + Sbjct: 181 VTLGQIHRLLVVLLISVVTIVGAIAAADFAFQKYKHIEELKMTKQEVKDEHKNAEGDPQI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +IRQ++ AR RMMA VP+A V++ NPTH++VAL+YD + MSAP +VAKG +AL+ Sbjct: 241 KSKIRQLRMRRARERMMARVPEASVVITNPTHFAVALKYDMDMMSAPVLVAKGQDFIALK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 IRE+ EN VP +E PPLARAL+ EI +IP Y AVAEV+ +V +LK+ Sbjct: 301 IREVAEENEVPIVENPPLARALFAAVEIDHEIPPDHYKAVAEVIGYVMRLKKATKR 356 >UniRef50_C1A547 Flagellar biosynthesis protein FlhB n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A547_GEMAT Length = 366 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 119/358 (33%), Positives = 193/358 (53%), Gaps = 1/358 (0%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S+ +KTE + RLE+ARE+GQI +S E + LL + V F G L R L + Sbjct: 4 SESGGEKTEEASGKRLEEAREKGQIAKSPEFATAAFLLGFLLVFSFTGPQLWRFLLDTMG 63 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 L + ++ + ++ ++A+L ++ + +VA+ G + + K+L Sbjct: 64 TSLATAGDSEHMGAGLIPWMQVISFRTIVAMLGAVAAMAVVAVAVQAAQTGGLLTTKTLA 123 Query: 122 PKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM-AESPIT 180 PKF +LNP+ R+ Q+ EL KA+LK ++VG + WP + L SP+ Sbjct: 124 PKFERLNPMSNAGRILGKQSIVELAKALLKMMIVGYAVYMTVSDAWPDLQALALNASPMA 183 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + + D +Q + ++ L+M++Q++++E K EG+P VK Sbjct: 184 LLEVVQKYGFALIKNAGMMFLVLAMADYGYQRWKTMEDLKMTKQEVKEEHKSQEGNPEVK 243 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GR R + R RR+M A VPKADVI+ NP H ++A++YD N AP VVA G +A RI Sbjct: 244 GRRRAIARERIRRQMFAAVPKADVIIVNPVHIAIAIKYDPNVAPAPYVVALGERKIAQRI 303 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +E+ ++ VP +E PLARAL + A++G IP ++Y AVAEVLA+V + + A + Sbjct: 304 KELAFQHGVPVIENKPLARALIKVAKVGTVIPVEMYLAVAEVLAFVMRQRERYGAKWR 361 >UniRef50_UPI00019F17CC secretion system apparatus protein SsaU n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F17CC Length = 347 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 98/339 (28%), Positives = 175/339 (51%), Gaps = 2/339 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KT+APT ++ AREEGQ+ ++ EL + + L V + ++ G + + LS +L Sbjct: 2 SGEKTQAPTSKKIRDAREEGQVAKTAELAAGVQLAVILMYLYLWGDDIWQDLSDLL--LF 59 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 D P G I + + L+ L + + ++ + + G +FSGK++ PK Sbjct: 60 TIDKMNDPLPIAFAGFISMFGKFVFEDLIFLFAVLFFASMSAYLAQIGFLFSGKAMMPKL 119 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 KL+ + +K +FS ++ ELLK ++K ++GSV + + P + ++ P AM Sbjct: 120 DKLDVVKNLKNIFSVKSLVELLKNLVKMTIIGSVFYYLFCRYIPSLRNMVYIEPADAMQV 179 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 + ++ +VL I D +Q + +K LRMS ++++ E+K+ EG VK + Sbjct: 180 TLKIIFWLWGGLVLCYIVFSLADYAYQRYELMKNLRMSHEEVKQEYKEMEGSAEVKSHRK 239 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + + + V K+ ++ NPTH ++ + YDEN P + AKGA L+A I +I Sbjct: 240 SLHQEIQSGSLANTVKKSSAVIRNPTHLAICIYYDENITPLPVITAKGADLIARYIVDIA 299 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVL 343 + VP +E PLAR L + + G I ++A++E+L Sbjct: 300 EKAGVPVIENVPLARGLNKEIKTGDYISPPFFSAISEIL 338 >UniRef50_B8H3H7 Flagellar biosynthesis protein FlhB n=6 Tax=Caulobacteraceae RepID=B8H3H7_CAUCN Length = 361 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 124/362 (34%), Positives = 203/362 (56%), Gaps = 4/362 (1%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+D++D KTE P+ +L AR +G + +S ++ L L VSVI G L R L Sbjct: 1 MADDTDPESKTEEPSAKKLSDARAKGDVIKSADIPQLASLAGAVSVILLAGGWLTRDLMA 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 L+ + +I + + + A+ AL+ ++ + + G + + + Sbjct: 61 ALTPFIAHAGTIDLSSGGAMIVLKQALLAALPALVLVMVVTAFAGAAAHIAQTGFLLTPE 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 ++P F KL+ + G+ R+F + LK+ +K +L G + F L H ++ L+ P Sbjct: 121 KIKPDFQKLDLIKGLGRIFGPDGMVQFLKSAVKFLLTGVIAYFVLKPHVGEVRNLVGMDP 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + AM L + V+L ++ FD F+Q + ++RM+ Q++++EFKQS+GDPH Sbjct: 181 AAMIPEAMKLSKGLLIAVILLLVATSAFDYFWQRMRFMNRMRMTLQEVKEEFKQSDGDPH 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +KG+ RQ+Q +R+RMM VPKA V+V NPTHY+VAL+Y++ + AP VAKG +AL Sbjct: 241 IKGKRRQIQMQRSRQRMMQAVPKATVVVMNPTHYAVALKYEQGETPAPLCVAKGVDDLAL 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +IR + E+ VP LE PPLARALY EI ++IP + + AVA+V++++ L + Sbjct: 301 KIRAVAEEHGVPVLEDPPLARALYASVEIDEEIPVEHFEAVAKVISFI--LNGKKPQPRA 358 Query: 359 RP 360 RP Sbjct: 359 RP 360 >UniRef50_C1F996 Flagellar biosynthetic protein FlhB n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F996_ACIC5 Length = 409 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 117/388 (30%), Positives = 200/388 (51%), Gaps = 15/388 (3%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S ++TE +P R ++ARE+G IP SR+LTS +L G V+ + G R +G S L Sbjct: 2 SGERTEKASPRRKQEAREKGDIPHSRDLTSAAAMLAGTLVLGWAGPMWEARWAGSYSEML 61 Query: 65 HFDHSIINDPNLILGQIILL---IREAMLALLPLISGVVLVALISPVMLG-GLVFSGKSL 120 ++ +++ + + + L+ + A+++ V G G+ F+G+++ Sbjct: 62 DLSQPRSWLDGQMVEKMLAIRAAMMTVLWPLVVMFLACFAAAVLAGVAQGRGVQFAGEAI 121 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK +LNPL +++ FS++ +LK+ L + + + + Sbjct: 122 APKIERLNPLTVLQQTFSSRGLTRMLKSALPVAALACFVAGKVREQTAIPVFSLTR---- 177 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + + + + D + +S ++LRMS+Q++R+EFKQ+EG+P V+ Sbjct: 178 -LPSLFTSMYSLMVAAAAVLFVWSAIDYAVEWWSWEQRLRMSKQEVREEFKQTEGNPEVR 236 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RI ++R R+ + ADV +A V++ NPTHY+VALQ+ M AP+V+AKG L+A +I Sbjct: 237 RRIASIRRQLRRKALRADVSRASVVITNPTHYAVALQFSLELMEAPRVLAKGRDLLAEQI 296 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVW------QLKRWRL 354 ++ VP +E PPLARALYR E+GQ IP LYAAVA +LAW++ +L+R + Sbjct: 297 KQEARWAGVPLVENPPLARALYRQVEVGQSIPFALYAAVAAILAWLYRRDMEERLRRQQQ 356 Query: 355 AGGQRPVQPTHLPVPEALDFINEKPTHE 382 R E + +P + Sbjct: 357 QEAARARTQDFSTQREEAQGMGTQPASQ 384 >UniRef50_B5JK52 FlhB/HrpN/YscU/SpaS family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JK52_9BACT Length = 369 Score = 350 bits (899), Expect = 5e-95, Method: Composition-based stats. Identities = 101/353 (28%), Positives = 177/353 (50%), Gaps = 1/353 (0%) Query: 1 MSD-ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+D + D KTE PT RL +E+G P+++E+ LL G+ V+ F G ++A Sbjct: 1 MADTDQDSKTEKPTAKRLTDEQEKGNFPQAQEVGVTFTLLAGLLVVMFSGQTIASNAFSF 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 S+ L SI N I +I P + ++ +I+ + F+ K+ Sbjct: 61 SSSILGNLSSIDLSTNNISYFFNEVIVVLGRLAAPFMLAGMVSGIIAGGLQTRFRFTPKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L KF+KLNP+ G K++ S +LK +G + + + + Sbjct: 121 LGIKFNKLNPINGAKQLVSKDVFVRFGIDLLKMGAMGLILWVAMRKIIKDPIFYAPIDIV 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 D + + + + V + +Q + K++M++++++ E K + P + Sbjct: 181 HVGMFITDTLVYVFIRLTIAVGLIAIISYLWQSKKTMDKMKMTKEEVKQERKDQDMSPEI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 + QM + +M+ +V ADV+V NPTHY+VAL+Y+ SAP V+AKG A R Sbjct: 241 RKARMQMAMRLMQGQMLDEVATADVVVTNPTHYAVALKYERGVDSAPMVLAKGENAFAQR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 I+E+ AE+ VP +E +AR LY+ A++G IP +++ +VAE+LA+V++ R+ Sbjct: 301 IKEVAAEHGVPVVENKMVARMLYKVAQVGAAIPMEMFQSVAEILAFVYKTHRY 353 >UniRef50_C4PLU4 Type III secretion system inner membrane protein n=14 Tax=Chlamydiales RepID=C4PLU4_CHLTZ Length = 360 Score = 349 bits (897), Expect = 7e-95, Method: Composition-based stats. Identities = 93/350 (26%), Positives = 163/350 (46%), Gaps = 1/350 (0%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLH 65 +KTE TP RL AR++GQ+ +S++ S + +V + + + A L L + Sbjct: 2 GEKTEKATPKRLRDARKKGQVAKSQDFPSAITFIVSMFLTFSLASFFAEHLGSFLVSIFK 61 Query: 66 FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFS 125 +DP+L + + + + LPL+ V V L+ ++ G FS + +P Sbjct: 62 -TAPQNHDPHLAVYYLKNCLILILTVSLPLLGAVGFVGLLIGFLIVGPTFSTEVFKPDLK 120 Query: 126 KLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNA 185 K NP+ +K+ F +T ELLK+I K + L + ++ P+ Sbjct: 121 KFNPIDNLKQKFKVKTFIELLKSIFKISGAALILYIVLKNRVELVIETAGIPPLVTAQVF 180 Query: 186 MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQ 245 +++ + + + + D+ +Q S K+L+M + +++ EFK +EG+P +KGR RQ Sbjct: 181 KEILYKAVTSIGIFFLVVAVIDLVYQRHSFAKELKMEKFEVKQEFKDTEGNPEIKGRRRQ 240 Query: 246 MQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGA 305 + + A + + A +V+NP +VA+ Y K AP ++A G L A RI Sbjct: 241 IAQEIAYEDTSSQIKHASAVVSNPKDIAVAIGYMPEKYKAPWIIAMGVNLRAKRIIAEAE 300 Query: 306 ENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 + VP + PLA L + + IP Y AV E+L ++ L L Sbjct: 301 KYGVPIMRNVPLAHQLLDEGKELKFIPETTYEAVGEILLYITSLNAQNLE 350 >UniRef50_A0RCA2 Flagellar biosynthetic protein n=72 Tax=Bacillus cereus group RepID=A0RCA2_BACAH Length = 348 Score = 349 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 100/348 (28%), Positives = 184/348 (52%), Gaps = 6/348 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ ++ KTE TP + +K+REEG I RS++L +L +LV V++F G L ++ + Sbjct: 1 MAKDN--KTEKATPQKRKKSREEGNIARSKDLNNLFSILVLAVVVYFFGDWLGFEIANSV 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 S + ++ + P++ V L + ++ G +FS K + Sbjct: 59 SVLFDQIGKNTDS----TEYFYMMGILLLKVSAPILILVYAFHLFNYMIQVGFLFSSKVI 114 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PK S++NP R+FS ++ ++LK++ L+G V + +++ ++ + Sbjct: 115 KPKASRINPKNYFTRLFSRKSLVDILKSLFYMGLIGYVAYVLFKKNLEKIVSMIGFNWTA 174 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 ++ + + L +++ +I + D +Q + + + ++M +++++ E K +EGDP VK Sbjct: 175 SLTEIIRQIKFIFLAILIILIVLSIIDFIYQKWEYEQDIKMKKEEVKQEHKDNEGDPQVK 234 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G+ + A + + + A IVNNPTH SV L+Y+++ +AP VVAKG +AL I Sbjct: 235 GKRKNFMHAILQGTIAKKMDGATFIVNNPTHISVVLRYNKHVDAAPIVVAKGEDELALYI 294 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 R + E +P +E PLAR+LY E + IP LY AV EV+ ++ Q Sbjct: 295 RTLAREQEIPMVENRPLARSLYYQVEEDETIPEDLYVAVIEVMRYLIQ 342 >UniRef50_D1BCL3 Flagellar biosynthesis pathway, component FlhB n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCL3_SANKS Length = 422 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 134/354 (37%), Positives = 199/354 (56%), Gaps = 5/354 (1%) Query: 1 MSD--ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS +S +KTE TP R+++ R++G + RS++L++ L + ++ A Sbjct: 1 MSGGGDSGEKTEQATPKRMKQNRKDGALQRSQDLSAWLGIGAAAVMLPVALGRGAEAAVD 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 LSA + DP +++ + + + +L PL+ VVL A++ V GGL + K Sbjct: 61 QLSAVREIISNP--DPLVVVDLLGTGMDSILTSLTPLLVVVVLAAVVGNVSQGGLHVATK 118 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L+PKF N + GIK F Q + +KA+ KT++VG V + + P ++ S Sbjct: 119 KLKPKFDHFNLVKGIKNTFGGQALWQGVKALAKTLVVGLVLYIAIQNLMPVLLTAGGLSV 178 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + A + V I + D+ + + KK RMS+ +++ E KQSEGDP Sbjct: 179 GALLSAAGGGIQALLWSAVAAGIALAILDLVVVMKRNRKKTRMSKYEVKQENKQSEGDPQ 238 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +KG IR Q A +R RM+A V ADV++ NPTH +VAL+Y+ AP+VVAKGAG VA Sbjct: 239 LKGAIRSKQIAMSRNRMIASVGDADVVLVNPTHVAVALKYEAG-TGAPRVVAKGAGHVAA 297 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 RIRE+ AE +VP + PLARAL+ EIG++IP LYAAVA+VLA+V LKR Sbjct: 298 RIREVAAEKSVPMISDVPLARALHGACEIGEEIPADLYAAVAQVLAFVMALKRR 351 >UniRef50_C7R0I2 Type III secretion exporter n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R0I2_JONDD Length = 380 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 129/383 (33%), Positives = 209/383 (54%), Gaps = 6/383 (1%) Query: 1 MSDE-SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MSD+ S ++TE TP R++ R++G + +S++L++ + G +V+ F ++ + + + Sbjct: 1 MSDDQSQERTEEATPKRMKDVRKDGSLQKSQDLSAWAGIGAGTAVLPFVFGNVEKHIEDV 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 L + DP L++ + + + AL PL++ V + A+++ + GG + K Sbjct: 61 LMNISTIASTP--DPLLVVPMLGDALAGILPALAPLLAVVFIAAILANGV-GGYYIATKK 117 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+P F + N + G+K+ F Q + +KA+LKT+++G+V + P + + A + Sbjct: 118 LKPTFKQFNLIKGMKQKFGMQALWQGVKALLKTVVIGAVLYLLIQGMIPVIQQSGALTMR 177 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 +G A + V I + DV + + KK +M++++I+DE K +EGDP + Sbjct: 178 AVLGYASEKFMQLMWTAVAAGIALAILDVVVVMKRNRKKTKMTKKEIKDENKNTEGDPLL 237 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KG IR Q A +R RM+A V ADV+V NPTH +VAL Y + APK+VAKG LVA R Sbjct: 238 KGAIRSRQLAMSRNRMIASVADADVVVVNPTHVAVALTYVAGE-GAPKLVAKGKNLVAQR 296 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE ++VP + PLARAL H EIG IP L+ AVA+VLA+V L++ A Sbjct: 297 IREEAEAHDVPLVRDIPLARALNAHCEIGHPIPPALFTAVAQVLAFVMLLRQRGAAMATV 356 Query: 360 PVQPTHLPVPEALDFINEKPTHE 382 P VP + + T E Sbjct: 357 KTMPAPTDVPLDM-YDPRSDTDE 378 >UniRef50_Q2RZE8 Flagellar biosynthetic protein flhB n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZE8_SALRD Length = 353 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 114/352 (32%), Positives = 196/352 (55%), Gaps = 2/352 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ + +K PTP RLEKARE+G + R+ E S+ +LL ++V GG S + L M Sbjct: 1 MSE-TQEKQYDPTPRRLEKAREKGNVLRATEPVSVGLLLTAMAVFSVGGASAFQSLQDMA 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + + P + + + + L PL +++ A+ ++ G S + Sbjct: 60 ARIFLRSARMSLTPASLQRLVAEIGAQVAGMLAPLFIVLIVAAVGLNMVQSGWNVSFTPI 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 QP+ S++NPL G+K++FS++ K +LK +VG + F + P+M+++ Sbjct: 120 QPQLSRVNPLEGLKQIFSSKGAFGFAKTLLKIGVVGPIAYFAMRPLIPEMVQVYTLPLPA 179 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + A D V++G++ + D F+ + + + L+MS++++ DE K++EGDP + Sbjct: 180 LLNQAADWFFALMWRVLMGLVVIAALDYAFERWKYYEDLKMSKKEMEDEQKETEGDPEFE 239 Query: 241 GRIRQMQRAAARR-RMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 + R+ + A + RM V K+D +V NPTHY++AL+YD ++ AP+V+ KG ALR Sbjct: 240 EKRREKAKELAEQPRMDHAVMKSDAVVTNPTHYAIALRYDPDEAPAPRVLLKGVRKRALR 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 I+E+ AE +VPT E LA ALY + ++IP +LY AVA +LA V++ + Sbjct: 300 IKELAAEFDVPTFENRSLAHALYENVPEEEEIPEELYPAVAAILAEVYEQRG 351 >UniRef50_Q89AN6 Flagellar biosynthetic protein flhB n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=FLHB_BUCBP Length = 382 Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats. Identities = 127/373 (34%), Positives = 227/373 (60%), Gaps = 1/373 (0%) Query: 1 MS-DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M+ DES++KTE+PT +RL+ ++E G REL SLLIL + + W+ + L + Sbjct: 1 MNHDESEEKTESPTSYRLKISKETGHNRYYRELYSLLILTITLINFWYNQRLILTLLKRI 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 F++SI + + +++ ++ +++LL +I +L+ + ++L F+ K Sbjct: 61 FYLSFTFNNSIFQNDLFLDHNFLMIFQDNLISLLGIIFFPMLIFMFPAMILCCSNFNFKF 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++ +KLNP+ G K +FS ++ +L K +LK + V V F+ ++ ++ + Sbjct: 121 IKFDINKLNPILGFKNVFSIKSIVDLFKTVLKIVFVSIVVYLFISKYFLKVCFSSNFTFD 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + ++ + LC L +++ IP++ D+F++ ++ + LRM+R+++ DE K EG+P + Sbjct: 181 YILNYSVRTIFLCFLTILIFFIPIIIIDLFWEKYNFYRSLRMTRKEVSDELKNMEGNPRI 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RIRQ+ + + RRM+++V K+DVIV NP HY++A++Y+E M APK++AKG +A++ Sbjct: 241 KSRIRQIMFSISNRRMLSNVSKSDVIVVNPMHYAIAIKYNETNMYAPKILAKGIDELAIK 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 I++IG +++PTL + LA LY E+G+ IP LY AVAEVLAWVW+++ W++ GG Sbjct: 301 IKKIGNNHSIPTLVSHSLAHVLYYRTEVGEYIPSVLYEAVAEVLAWVWKIRHWKIKGGVF 360 Query: 360 PVQPTHLPVPEAL 372 P P +P L Sbjct: 361 PRTPEKFFIPSEL 373 >UniRef50_B1Z5N7 Type III secretion exporter n=4 Tax=Burkholderia cepacia complex RepID=B1Z5N7_BURA4 Length = 352 Score = 347 bits (891), Expect = 5e-94, Method: Composition-based stats. Identities = 102/345 (29%), Positives = 183/345 (53%), Gaps = 2/345 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 SD+KTE PT +L+K REEGQ+ +S +L + L V V+ G LA L ++ + Sbjct: 2 SDEKTEEPTDKKLDKVREEGQVAKSSDLVEVASLGSIVLVLTAGQHYLADTLRAVVKEAI 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F H + + ++ + +A+ L + + ++ A ++ GL S K++ PK Sbjct: 62 DFTHGP-RELQDLSVALVHMGLQALGLLCGIAAVALVAAFLALAPQTGLKISLKAVMPKL 120 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 + ++P G +R+FS + +L+K ++K ++ +V + P + + +S + Sbjct: 121 ASVSPGSGFQRIFSMNSAIDLVKMVVKAAILVAVMWQTIKSAMPVVASALDQSVPQLIAV 180 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 ++ ++ + I + FD Q + ++K RMS+ +++ E K+S+G+P VKG + Sbjct: 181 LWSVLMHVVVVALGVFIAIGAFDYKLQKWLFIRKNRMSKDEVKREHKESDGNPEVKGERK 240 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 +M R ++ V +A+V+V NP HY+VAL+YD + P V+AKG ALR+R+ Sbjct: 241 RMAREMSQEGPKGGVSRANVVVVNPVHYAVALRYDPTEFPLPVVLAKGLDEQALRLRQQA 300 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 VP + PP+AR L++ + Q IP +L+ VA +L WV L Sbjct: 301 MHARVPIVANPPVARMLHK-VPLNQPIPEELFEVVAAILRWVDGL 344 >UniRef50_A3V235 Flagellar protein FlhB n=2 Tax=Rhodobacterales RepID=A3V235_9RHOB Length = 383 Score = 347 bits (890), Expect = 5e-94, Method: Composition-based stats. Identities = 126/388 (32%), Positives = 196/388 (50%), Gaps = 21/388 (5%) Query: 1 MSD---ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 M+D + +KTE PT RLEKA+E+GQ+ S+EL L L VG ++FG + L Sbjct: 1 MADEASDGQEKTEEPTQKRLEKAKEDGQVASSKELFVLSTLSVGFL-LYFGLLPFLSGLL 59 Query: 58 GMLSAGLHFDHSIINDPNLI---LGQIILLIREAMLALLPLISGVVLVALISPVMLGGLV 114 SA L F +I + ++++ LPL+ +VL + G + Sbjct: 60 LEWSALLRFSGEAGLHDEIIRNSSTSFAFIFWKSVIFALPLLVIIVLTQMAMS---GSIN 116 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 +S +L K S++NP+ G+KRMFS + E+LKA+ K + F +++ Sbjct: 117 WSASALAFKGSRINPVNGLKRMFSVKALVEMLKAVGKVASLIGAAIFVFSSEVDKLLTSQ 176 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 A + D+ ++ +L + + FDV +Q + + KKL+M+ Q+++DE KQ+E Sbjct: 177 ATHLFGGLSRLGDVFIFLMIVFLLVLAVIAMFDVVYQQYDNNKKLKMTLQELKDESKQTE 236 Query: 235 GDPHVKGRIRQMQ-----RAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVV 289 G P VK +IR++Q RA RR M VP A I+ NP H++VAL+Y+ AP ++ Sbjct: 237 GSPEVKAKIRRLQMTAGSRAKQRREAMEQVPSATAIITNPIHFAVALKYEIGTRGAPTIL 296 Query: 290 AKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 A G G A I +G E V LARAL+ IG +IP LY AVA VLA+++QL Sbjct: 297 AMGRGHQAQEIIRLGKEAGVTVFSNELLARALFFAGRIGDEIPPPLYTAVAAVLAFIYQL 356 Query: 350 KRWRLAGGQRPVQPTHLPVPEALDFINE 377 + V + +P+ + F Sbjct: 357 NKGEQ------VDEPDVDLPDDMLFDAN 378 >UniRef50_Q1GCC9 Flagellar biosynthetic protein flhB n=3 Tax=Rhodobacteraceae RepID=Q1GCC9_SILST Length = 363 Score = 346 bits (889), Expect = 7e-94, Method: Composition-based stats. Identities = 115/361 (31%), Positives = 185/361 (51%), Gaps = 5/361 (1%) Query: 1 MSDESDD--KTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MSDE+DD K+ PTP +L KAR+EG +P+S +L L + + G S +L Sbjct: 1 MSDENDDSDKSFEPTPEKLRKARQEGDVPKSNDLLQAASYLGLLIAFYTAGRSSIEQLGT 60 Query: 59 MLSAGLHFD---HSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVF 115 +L + + + + I +A+ +++ + + +++ +VF Sbjct: 61 VLMSMIDQPDRLAPVFFGDGIAAPVAWEFISDALTSVIAWFAVPAALVILAVFAQKAMVF 120 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 + K +QPK S+L+ + K F E K+ K +L G +L P+M+ + Sbjct: 121 APKRIQPKLSRLSIIKNAKNKFGRSGLFEFAKSFFKLLLYSITLGVYLSWRLPEMIASVG 180 Query: 176 ESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 SP T + + L +L ++ + + D FQ ++K MSR+D+ DE K SEG Sbjct: 181 TSPFTVVPFLVQLAMEFLILTLIIALAIGLVDAPFQQAEFIRKNMMSRKDVMDEMKNSEG 240 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DPH KG+ +Q R +++ A VP+ADV++ NPTHY+VAL++ SAP+ VAKG Sbjct: 241 DPHTKGQRKQKGRQIVSKQIAAAVPEADVVIVNPTHYAVALKWSRVSGSAPECVAKGVDG 300 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 VA IREI EN VP PP ARALY E+G++I + YA VA + + ++++ Sbjct: 301 VAAMIREIAQENGVPLHSDPPTARALYATVEVGEEIAEEHYAPVAAAIRFAEEMRKKAKE 360 Query: 356 G 356 Sbjct: 361 S 361 >UniRef50_D2R543 Type III secretion exporter n=3 Tax=Bacteria RepID=D2R543_9PLAN Length = 363 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 120/356 (33%), Positives = 190/356 (53%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M D++ +K+ T HR +KAREEGQ+ +S++LTS +L+ + ++W+ + + Sbjct: 1 MDDDNGEKSHEATQHRRDKAREEGQVVKSQDLTSAAMLMACLLLLWYFSSGMFELVGAFT 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + + + LLPL+ ++L A+ + G +F L Sbjct: 61 RDQITGQLWQPITLADVTSDFARIGGLLARTLLPLLLMMMLAAITIQLSQTGFLFLPNKL 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 ++NPL KR+F+ L +LK +L+G V G LW ++ L +S Sbjct: 121 AMDLERINPLNNSKRIFAVSNLVSLGFGLLKVLLIGVVAGLSLWQQRATILELTDQSAAV 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 ++ ++ + ++ + D +Q + H + LRM+ Q +R+E K+ GDP Sbjct: 181 IGKFVLETALWTSIKIAAALLVLAILDYGYQWWKHEQDLRMTTQQVREEMKEQTGDPQTM 240 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R +Q+QR R+ +PKADVIV NPT ++ALQYD N M AP V+AKGAG++A RI Sbjct: 241 QRRKQIQRQLVMNRLSTSIPKADVIVTNPTELAIALQYDPNTMPAPIVIAKGAGVLAQRI 300 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 R + ENNVP +E LARALY+ E+ Q +P + YAAVAEV+ +V+QLK +L G Sbjct: 301 RRLALENNVPVVERKELARALYQLVEVNQPVPSEQYAAVAEVVRYVYQLKGKKLPG 356 >UniRef50_B9KJE4 Flagellar biosynthetic protein FlhB n=7 Tax=Rhodobacteraceae RepID=B9KJE4_RHOSK Length = 382 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 130/383 (33%), Positives = 203/383 (53%), Gaps = 15/383 (3%) Query: 1 MS--DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+ D+ +KTE PT R E+ARE+G I S+E+ L G++++ L + G Sbjct: 3 MAEGDDGQEKTEEPTQKRREQAREDGSIVTSKEVFVFATLAGGLALLMMIEGLLPALVRG 62 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + + ++ ++ RE ++A L + ++ + L+ +GG+ FS K Sbjct: 63 WSGYLVIEPGADLERIAMV--RLGQAWREVLIAGLVVSVPLLALVLLVQSAMGGINFSTK 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +L K S++NP G+KRM S + EL KA+ K L+ V L + RL +P Sbjct: 121 ALSFKASRINPAAGLKRMVSLKALVELAKAVAKVALLIGVAVLVLRDELSPLDRLWTAAP 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 A + +++ + + G D+ +Q +S ++MSRQ++++E K+S G P Sbjct: 181 GDAATVLGAGLIRLVSALLIVLAVIGGLDLVWQAWSLTNSMKMSRQELKEESKESNGSPE 240 Query: 239 VKGRIRQMQRAAA-----RRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 VKGR+R+MQ A+ RR + DVP+A IV NPTH++VAL+Y + AP ++A G Sbjct: 241 VKGRMRRMQMEASRNGARRRAALDDVPQATAIVTNPTHFAVALRYVPGETPAPVILAMGK 300 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 G +AL I E G + + TL P LARALY +IGQ+IP LY AVA VLA V++L R Sbjct: 301 GPMALDIIERGRKAGIGTLRIPLLARALYFTGDIGQEIPDGLYGAVAVVLAHVYRLDRGE 360 Query: 354 LAGGQRPVQPTHLPVPEALDFIN 376 A + + VPE L F Sbjct: 361 AA------EMPDVDVPEGLAFDE 377 >UniRef50_A8LMR4 Flagellar biosynthesis protein FlhB n=3 Tax=Rhodobacteraceae RepID=A8LMR4_DINSH Length = 362 Score = 339 bits (871), Expect = 8e-92, Method: Composition-based stats. Identities = 111/360 (30%), Positives = 174/360 (48%), Gaps = 4/360 (1%) Query: 1 MSDES--DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS++ DDK + +L AR++G++ +S +L + + + F G + Sbjct: 1 MSEDESPDDKPFEASEKKLLDARKKGELVKSTDLIATGSYGGLILGLVFAGAGTLTISAA 60 Query: 59 MLSAGLHFDHSIIND--PNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFS 116 + L ++ + + LI + AL +L A+ S V+ LVF+ Sbjct: 61 TMQGLLREADTLAPELFAGGASSISLTLILGTVGALSLWFFLPMLGAIASLVLQRALVFA 120 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 L+PK ++++ L K F + E LK+ K ++ + G + M+ L A+ Sbjct: 121 PTKLEPKLNRISILSNAKNKFGREGLFEFLKSTFKLVVFSILLGLLFMYELDTMISLAAQ 180 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 +G L+ LV L + + G D +Q HL+K RMSRQ++ DE K +EGD Sbjct: 181 PVSAIIGFVFYLLIEFLALVFLATLLIGGVDYIWQRAQHLRKNRMSRQEVVDETKSAEGD 240 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 PH K RQ A ++M+ADVP A V+V NPTHY+VAL++D +AP VVA G V Sbjct: 241 PHSKQYRRQRAIEIATQQMLADVPDASVVVVNPTHYAVALKWDRFSPTAPIVVASGVDHV 300 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 A IR+ E VP PP ARALY ++GQ+IP + AVA + + ++ Sbjct: 301 AAAIRQRAQEAGVPIHRDPPTARALYATCKLGQEIPRAQFKAVAAAIRFAEAMRAKARKK 360 >UniRef50_Q01PP8 Type III secretion exporter n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PP8_SOLUE Length = 354 Score = 339 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 122/356 (34%), Positives = 188/356 (52%), Gaps = 2/356 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D+S KTE PT RLEKAR EGQ P ++E S L +V + ++ GG ++L Sbjct: 1 MADKSG-KTEQPTQRRLEKARTEGQFPAAKEFVSALQFMVFLGLLGSGGAGWFKQLRQTT 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + + P ++ + + ++ +L L+ V + + + S K L Sbjct: 60 RSLFGLAFAPELRPEDLIHVMWQIFQQLLLPLVMAGVAVAVATVAFRLATTRFGISFKKL 119 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 P ++ NPL +K + QT L +A + M L +S + Sbjct: 120 MPDAARFNPLSRLKDL-PKQTLPALAQAAFLLPVFLWAVWVVGQEKLDAFMALPMQSVES 178 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 M + + + D+ Q+ H +LRMS+Q+IR+E K EG+P +K Sbjct: 179 GMNLICASLMELFWKAAGVFLLVGCVDLARQLQRHKSELRMSKQEIREEMKDVEGNPQMK 238 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 RIR++QR R++MM DVP A +V NPTHY+VA++Y + M+AP VVAKG +ALRI Sbjct: 239 ARIRRLQRDRVRKQMMKDVPTATAVVVNPTHYAVAIRYQMDGMAAPMVVAKGMNHLALRI 298 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 R+ E+ VP +E PPLA+ALY+ E+GQ+IP LY AVAE+LA++++L R+ G Sbjct: 299 RQKATEHQVPIIENPPLAQALYKSVEVGQEIPPHLYRAVAEILAYIFKLMNGRMPG 354 >UniRef50_C6QF02 Type III secretion exporter n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QF02_9RHIZ Length = 360 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 115/355 (32%), Positives = 186/355 (52%), Gaps = 2/355 (0%) Query: 1 MSD-ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS+ + +TE T +L AR +G +P SRE+ + L L+ + VI G + A L + Sbjct: 1 MSEQDQQSRTEEATDKKLLDARNDGNVPSSREVPNFLYLMAALLVIAVLGQTFASHLGSL 60 Query: 60 LSAGLHFDHSIIN-DPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 L L SI + ++ ++ + A + P+I +I+ V + K Sbjct: 61 LVGLLANAGSIRLGNGGDVMLLFDVVGKAAAVVTAPIILAFGAAGVIASVAQNPPIPIAK 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 + P S+L+P G+KRMFS E LK L+ ++V + L + W + P Sbjct: 121 RVIPDISRLSPAKGLKRMFSLSGLFEFLKLSLRLVVVVVTSVAILMYMWHDFTNSIWNDP 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + + V + + L ++ FD+ + LRM+RQ+I+DE KQ EGDP Sbjct: 181 SAILTLSQKSVVALLISLALMSFTLLIFDLPVAHVLWRRSLRMARQEIKDEQKQMEGDPL 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K R R + +A +R+RM+ V KA +++ NPTH++VAL+Y ++ AP+VVAKG L+AL Sbjct: 241 MKARRRSIAKARSRQRMLKGVSKATIVIANPTHFAVALRYVRSEGGAPRVVAKGQDLIAL 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +IR I EN +P +E LAR+LY E+ Q IP + Y A+AE+L + + + Sbjct: 301 KIRRIAEENAIPVIEDKALARSLYAKVEVDQMIPAEFYRAIAEILIRLQARRNRQ 355 >UniRef50_A9HH78 Putative flagellar biosynthetic protein flhB n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HH78_GLUDA Length = 358 Score = 338 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 119/352 (33%), Positives = 184/352 (52%), Gaps = 3/352 (0%) Query: 1 MSDESD--DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M++ S +K++ PT RLE AREEG + +SREL L IL + V ARR Sbjct: 1 MAEGSGGGEKSQDPTGKRLETAREEGNVAQSRELLMLAILGGFLLVFTMATADSARRFVA 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + + SI D I + E +L PL+ +V + ++ G ++ + Sbjct: 61 HVGGTMEHFDSIPTDMTSIYRIAVQTALEGVLLAAPLVFTGFVVTIACGMLQTGFLYRPQ 120 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 ++ P ++L+P+ G++RMF E+LK++ K ++ G V S Sbjct: 121 AILPDITRLSPMRGLQRMFGMTNVVEMLKSLTKFVVFGVVLYAVAKGTLHVAPEAERWSM 180 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + + L+V+L + D + + + LRMS QDI+DEF+Q+EGDP Sbjct: 181 LRLVSELSSWFAYAVLVVLLVQCVIAILDDLWTRYHRIVGLRMSFQDIKDEFRQTEGDPK 240 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 VKGR++QM+R ARRRM+ V A V++ NPTHY+VAL Y+ SAPK+VA G +A Sbjct: 241 VKGRLKQMRRRRARRRMLQAVKTATVVITNPTHYAVALSYESGADSAPKIVASGTDELAA 300 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 RIR + VP + PPLARAL+ + +IP + + VA ++A+V +LK Sbjct: 301 RIRHAAEDAKVPVVANPPLARALHA-LPLDSEIPSEYFQPVAAIIAYVMKLK 351 >UniRef50_A5P6J3 Type III secretion exporter n=2 Tax=Erythrobacter RepID=A5P6J3_9SPHN Length = 387 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 124/378 (32%), Positives = 204/378 (53%), Gaps = 8/378 (2%) Query: 1 MSDES-DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS+++ +K APT RL A ++G + RS++ + ++L G + + G L L+ + Sbjct: 1 MSEDTPGEKNFAPTEKRLADAAKKGDVLRSKDAGTAAVMLFGGAWLALAGPWLLEGLTDL 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 FD S + D + + G +I + + A+ L V++V L S + G + + Sbjct: 61 ARDAFLFDASDLRDFS-VQGLLIEGLLLGVPAVFALAVPVIVVTLFSQLAFGRGRWVTDN 119 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+ K ++NP+ G+KRMF Q E+ K +LK L+GS+ + W+ ++ L + Sbjct: 120 LKAKGQRINPMSGLKRMFGMQGLIEMGKGLLKIALLGSIAAAWWWNSMDVVIGLGRGNLS 179 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + A + + G++ + D+ Q K+L+MS Q++RDE K+SEG P + Sbjct: 180 AQLTAAWRAIVSLVFALSAGLVVIAFVDLPIQWLRQQKRLKMSHQEMRDENKESEGSPEM 239 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 + RQ QR A + + +A ++ NPTH++VAL YD + SAP ++AKG G AL Sbjct: 240 RAARRQRQRDIATGSVAGAMREAQFVIANPTHFAVALTYDPARASAPILLAKGRGDKALA 299 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 ++E+ +E ++PTLE P LAR++Y Q I LY+AVA V+A+V+ LKR G+ Sbjct: 300 MKELASELDLPTLEMPQLARSVYYTTRERQIICEDLYSAVASVIAYVFSLKR-----GET 354 Query: 360 PVQPTHLPVPEALDFINE 377 P PT + VP AL F E Sbjct: 355 PPLPT-VEVPAALHFDTE 371 >UniRef50_C3XFW9 Flagellar biosynthesis protein FlhB n=3 Tax=Helicobacter RepID=C3XFW9_9HELI Length = 372 Score = 337 bits (864), Expect = 6e-91, Method: Composition-based stats. Identities = 107/353 (30%), Positives = 190/353 (53%), Gaps = 3/353 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M++E +KT AP+ +++KAREEG + +S +L L+ L+VG+ +++ + G+ Sbjct: 1 MAEE--EKTHAPSQRKIQKAREEGSVAKSPDLVGLVGLVVGLMLLFIIFPFWVKIFKGLY 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + + + I + +++ A L +P +++ +I V G + S K + Sbjct: 59 VECTKLFL-VDFNMHTIFAITLTILKVAALCAMPFFFALMVAGIIGNVAQFGFLLSFKII 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +PK K+NP+ G K +FS + + LK + +V F ++ + Sbjct: 118 KPKVDKINPIKGAKNLFSLKKLLDGFIITLKVFIAFAVGFFIFVGFLDEVANISMSPLKE 177 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + ++ + M D + + ++K LRMS+Q+++DEFKQ EG+ VK Sbjct: 178 QLTWFYQKALILIGALLFLFLVMGILDFLIKRYQYIKSLRMSKQELKDEFKQQEGNQEVK 237 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +IRQ+ A +MM+ +P A+V+V NPTHY+VAL+++ SAP VVAKG +A+RI Sbjct: 238 AKIRQIMMKNAMNKMMSAIPSANVVVTNPTHYAVALRFNSETESAPVVVAKGIDHLAVRI 297 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 + I E+ + +E PPLAR LYR ++ + IPG+++ AV E+ V +L+ R Sbjct: 298 KGIAREHEILIIENPPLARELYRLVDVDRMIPGEMFEAVVELFQQVAKLEAER 350 >UniRef50_A3NKX0 Type III secretion protein, YscU/HrpY family n=25 Tax=Burkholderia RepID=A3NKX0_BURP6 Length = 352 Score = 336 bits (863), Expect = 7e-91, Method: Composition-based stats. Identities = 97/353 (27%), Positives = 180/353 (50%), Gaps = 2/353 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 SD+KTE PT +L AR +G++ RS +L+ + + + ++ + +++ L Sbjct: 2 SDEKTEEPTDKKLRDARRDGEVSRSTDLSDAVSMSAAILLLVAAADHFGDAMRALVNGAL 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F S + + ++ A+ A++PL+ L + V+ GL S K + P Sbjct: 62 AFV-SADHSLVEMTARLYQFGGIALSAVMPLLFVAALAGIGGSVLQVGLQISLKPVMPNL 120 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 LNP G+K++FS ++ E +K I+K ++V V + +P + + +SP Sbjct: 121 GALNPAEGLKKLFSPRSAIESIKMIVKAVIVFCVAWKTIVWLFPLIAGALYQSPPELSRI 180 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +++ ++V + M DV Q F ++K++M++ +++ E K EGDP +KG + Sbjct: 181 FREILAKWLMVVAGLCLLMGAADVKLQRFMFMQKMKMTKDEVKRESKNDEGDPLLKGERK 240 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 ++ R A V A+ +V NPTHY+VA++Y ++ P+VVAKG A+ +R Sbjct: 241 RLARELAAAPPQHQVAHANFVVVNPTHYAVAVRYAPDEHPLPRVVAKGLDEAAIALRRAA 300 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 + N+P + PP+ARAL+R + + +P +L+ VA +L W+ + R Sbjct: 301 QDANIPIIGNPPVARALFR-IGVEEPVPEELFEIVAAILRWIDAIGPRRNERA 352 >UniRef50_C6N718 Putative flagellar biosynthetic protein FlhB n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N718_9GAMM Length = 361 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 104/349 (29%), Positives = 178/349 (51%), Gaps = 1/349 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE TP++L+KA+E+GQ+ +S ELT+ + LLV + ++ + ML L+ Sbjct: 13 EKTEKATPYKLQKAKEKGQVSKSAELTTCISLLVLLGMMSALWPKQLHEIQEMLRHILYL 72 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + + I ++ + + LP VL +++ + G+V+S L P F + Sbjct: 73 AAQMQFSLDNINHLHQFILMQLLHQWLPFALAGVLAIILANLTQSGIVWSTTPLVPDFKR 132 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LN + G K++FS +T E K+ LK + F H ++ L G M Sbjct: 133 LNIVQGFKKLFSIKTCFEAAKSTLKLMSTFIFLFFAFKHQLTNILPLALTPTAQHPGLMM 192 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 + ++L + + D F+ + K RMS+Q+++DE+KQ EGDP +K +I+Q+ Sbjct: 193 HFLLSLIFQLLLLLSLLAVLDKFYTRWKFAKDQRMSKQEVKDEYKQREGDPKIKSKIKQL 252 Query: 247 QRAAARRRM-MADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGA 305 Q+ ++ + V ADVI+ NPTH ++AL+YD M APKVV K G + +++E+ Sbjct: 253 QQQLRQKTASLKQVKTADVIITNPTHLAIALKYDRTSMPAPKVVCKAQGEMVSQVKELAR 312 Query: 306 ENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 ++ VP +E AR LY E+ Q I +LY A + ++ +R Sbjct: 313 KHGVPIIENKSFARLLYHSVELNQWINKELYPFAAAIFKEIYARRRKEQ 361 >UniRef50_A6GN26 Type III secretion component protein SctU n=1 Tax=Limnobacter sp. MED105 RepID=A6GN26_9BURK Length = 353 Score = 334 bits (858), Expect = 3e-90, Method: Composition-based stats. Identities = 95/352 (26%), Positives = 161/352 (45%), Gaps = 3/352 (0%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PT +L+ AR++GQ+ S++ L LL+ ++ A R S +L + Sbjct: 2 SGEKTEKPTQKKLDDARKKGQVSVSKDAQILFKLLMFYMFFFWLSQDYAARFSELLDLIV 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 + + + +PL++ + A + G + S ++L P F Sbjct: 62 TAGLKQPWTFSE--SIFSMFFDLFVAITVPLVAVCAIAATLITWAQIGFLVSPEALTPSF 119 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 K + + IK MFS ++ +LL +I+K +++ V + M+ Sbjct: 120 KKFDAVSNIKNMFSKKSLVQLLLSIVKVLILSVVGYLVFKDNMGDMIYSYRAGLTQFFDV 179 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 + ++ + ++ + + D + H+K LRMS QDI DE KQS G+P +K R++ Sbjct: 180 LVHVLKAIIFVSLIIFMVIAVIDWSVEYMHHIKNLRMSHQDIADERKQSMGNPQLKQRMK 239 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + R+ + V A IV NPTH SVAL Y+ K P ++A G ALRIRE Sbjct: 240 REHRSILNSS-LTRVAGAKAIVANPTHISVALDYEPGKHDLPYILAMGTDDEALRIREFA 298 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 +N +P + LAR LY+ E + I + A+V V ++ + G Sbjct: 299 KKNGIPIIVNVKLARMLYQDCEEDEYIQREHLELAAQVFRAVMEMASDQDKG 350 >UniRef50_C5CXN4 Type III secretion exporter n=1 Tax=Variovorax paradoxus S110 RepID=C5CXN4_VARPS Length = 365 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 107/359 (29%), Positives = 199/359 (55%), Gaps = 1/359 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+++ D+ EA TP++L++ARE GQ +S ++ + L+ V V + + G Sbjct: 1 MAEQDLDRNEAATPYKLQRARERGQAAKSTDVVAALVFGVAVVYLTWRGFGAVASQFRFD 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 A L + + I +R A+ P + ++L A++ +M G + S + + Sbjct: 61 QALLIHAGRMDPSGVGLWPLIERALRSALTLAAPFFAAIMLAAIVGNMMQTGPILSFEPV 120 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + F+++NP+ G+K++FS + + +AI+K L+G V L Q L + SP+ Sbjct: 121 KMDFTRINPVNGLKKLFSMRVLFDTARAIVKLALLGLVAFLALEALASQFYALASLSPVG 180 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + +D + L + L + + D+ + KK+RMS+++++DE K EGDP ++ Sbjct: 181 YLRTLLDDLASVGLKMALVLTLIALLDLMYTRREFAKKMRMSQRELKDEAKHREGDPRIR 240 Query: 241 GRIRQMQRAAARRR-MMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 R+R+++R +R + AD+++ NPTH +VAL+Y+ +M++P+++AKGAG +A Sbjct: 241 ARLRELRRETLKRSLALRQTRNADMLITNPTHLAVALKYEHGRMASPQLLAKGAGHMAAA 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 +REI A + +P ++ PPLAR LY+ + +P +LYA VA ++ WV+ ++ RL G Sbjct: 301 MREIAARHRIPVVQNPPLARRLYKELPVDHSVPPELYAQVARIIVWVFAMREQRLGRGT 359 >UniRef50_A0LT73 Type III secretion exporter n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LT73_ACIC1 Length = 391 Score = 333 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 135/365 (36%), Positives = 195/365 (53%), Gaps = 4/365 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D S KTE PT +L++AR EG++ RS E+ + L LLVG+ ++ + Sbjct: 1 MADRSQ-KTEKPTQRKLKEARREGRVARSPEVGAWLGLLVGIFLVHLTMTRTTAAFRQAI 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + DPNL + + + +A PL ++L AL + V GGL S K+L Sbjct: 60 DGLTQVIRTP--DPNLAVHVLGTSLASGAVAAAPLAGAILLTALGASVAQGGLRLSAKAL 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK+ LNPL G KRMF + G E KA+ KT L+ + + P Sbjct: 118 APKWQSLNPLNGWKRMFGPRGGWEAAKALAKTGLLALILYDTMRGLVPLTTTGTVTPLQG 177 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + A V A + + + D +Q+ H LRM++ ++++E + +EGDP ++ Sbjct: 178 VVHTAGSAVLRFARDAAVAGLLLAFLDYAYQLRRHRASLRMTKHEVKEELRTTEGDPRIR 237 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 IR Q A RRRM+ DV ADV+V NPTH +VAL+Y AP +VAKGAG VA RI Sbjct: 238 SAIRVRQMALRRRRMIRDVATADVVVVNPTHIAVALRYTPGS-GAPTIVAKGAGAVAARI 296 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 R+ + VP +E PLARALYR ++GQ+IP +L+ AVA VLA+V+ LK+ GG Sbjct: 297 RDEAIRHRVPLVEDIPLARALYRICDVGQEIPRELFVAVARVLAFVFSLKKRGRVGGVHR 356 Query: 361 VQPTH 365 +PT Sbjct: 357 PRPTP 361 >UniRef50_O85640 Secretion system apparatus protein SsaU n=26 Tax=Enterobacteriaceae RepID=O85640_ECOLX Length = 345 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 87/350 (24%), Positives = 170/350 (48%), Gaps = 6/350 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS +KTE PTP +L +++G + +S E+ + + L+ S G+S + G++ Sbjct: 1 MS----EKTEKPTPKKLRDLKKKGDVTKSEEVMAAVQSLILFSFFSLYGMSFFVDIVGLV 56 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + + + I + ++ +L +LP+ V + + + V G +F+ + + Sbjct: 57 NTTIDSLNRPFL--YAIREILGAVLNIFLLYILPISLIVFVGTVTTGVSQIGFIFAVEKI 114 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +P K++ +K +FS ++ ELLK++ K +++ + F + + + Sbjct: 115 KPSAQKISVKNNLKNIFSVKSIFELLKSVFKLVIIVLIFYFMGHSYANEFANFTGLNAYQ 174 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 A+ V L V+ G + FD +FQ LKK++MS+ +++ E K ++G+P +K Sbjct: 175 ALVVVAFFVFLLWKGVLFGYLLFSVFDFWFQKHEGLKKMKMSKDEVKREAKDTDGNPEIK 234 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 G R++ + ++ K+ VIV NPTH ++ L Y + P V+ G AL+I Sbjct: 235 GERRRLHSEIQSGSLANNIKKSTVIVKNPTHIAICLYYKLGETPLPLVIETGKDAKALQI 294 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 ++ ++P +E PLAR LY++ GQ I + VA+++ L Sbjct: 295 IKLAELYDIPVIEDIPLARTLYKNIHKGQYITEDFFEPVAQLIRIAIDLD 344 >UniRef50_Q04SD5 Endoflagellar biosynthesis protein n=4 Tax=Leptospira RepID=Q04SD5_LEPBJ Length = 510 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 102/353 (28%), Positives = 177/353 (50%), Gaps = 5/353 (1%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 + E + +TE + R + RE+G +P+S EL + ++LL GV +I+ G R +L Sbjct: 158 AAEDEGRTEPGSERRRREEREKGNVPKSPELPAAVVLLAGVILIYLMGEYFFMRTFYILR 217 Query: 62 AGLHFDHS-IINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 +H + + + L PL+ + A+I V G +F+ ++L Sbjct: 218 KYIHGVGQRTDISSESVTELLKNASTDLFTLLWPLLGITFVGAVIGNVAQVGFIFTPRAL 277 Query: 121 QPKFSKLNPLPGIKRMF-SAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 FS++ P K++ + QT L K++ K L+ V+ + + ++ Sbjct: 278 SFNFSRIRP--NFKKVLPTRQTLFNLGKSLAKVGLIAWVSYIIISKDFFSILISGEMGLE 335 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ M L+V + ++ + D +Q + + + L+M+ + + E K+S+GD + Sbjct: 336 QAVALVMSSSFKIFLVVGIILLAISIVDYLYQRYEYEESLKMTPSEAKREAKESDGDRSL 395 Query: 240 KGRIRQMQRAAARRR-MMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 + R RQ+ R +R M+A VP+ADV++ NPTH++VAL+Y AP V+AKG AL Sbjct: 396 QARRRQLARDMMNKRKMLAKVPEADVVITNPTHFAVALEYKPGIHKAPIVIAKGVDDFAL 455 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 I I EN VPT+E AR LY E+G ++P Q Y A+A +L+ + +R Sbjct: 456 LIIRIARENGVPTVEDRIQARGLYEEVELGAEVPQQFYRAIATILSRLESFRR 508 >UniRef50_D0ZDM3 Type III secretion apparatus protein n=5 Tax=Edwardsiella RepID=D0ZDM3_EDWTE Length = 352 Score = 331 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 95/338 (28%), Positives = 163/338 (48%), Gaps = 2/338 (0%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PT RL AREEGQ+ +S+++++ + L V + + G +L + G + A L Sbjct: 3 EKTEQPTAKRLRDAREEGQVAKSQDISATVQLAVILLWMVTEGPTLYAAIGGFIDATLAT 62 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + + P+ I + + L + + + +++ ++ G +F+ K++ P + Sbjct: 63 LN--LPLPDAIALLTGKAAALVVRFVFSLAALLAVTLILTGLVETGFLFAPKAIMPSAER 120 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 +NPL K+M S EL K +LK +++G +F+ + +L+ + Sbjct: 121 INPLNNAKQMVSLLKLFELGKMVLKIVILGLTFTYFIRGYAASFAQLVRADAEAGLWVTS 180 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 + +++L D Q K+L MS +DI+ EFK +EG P +K R R++ Sbjct: 181 KMTLWMWGILLLLTALFAVVDYSMQYRHLRKQLMMSHEDIKQEFKNAEGSPEIKQRRREL 240 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 R + V A V+V NPTH +V L+Y E + P+VV G G A I + Sbjct: 241 HREIQSGSLADSVSSASVVVRNPTHIAVCLRYCEGETPLPQVVEYGRGARARHIVALAEA 300 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLA 344 +P +E PLARAL G +P L+ AVA++L Sbjct: 301 RRIPVVENIPLARALIATTRPGDYVPEALFVAVAQLLR 338 >UniRef50_Q1IR59 Type III secretion exporter n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IR59_ACIBL Length = 351 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 115/348 (33%), Positives = 179/348 (51%), Gaps = 5/348 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+D S KTE PT R +KARE+GQ+ RSREL L ++V + I G Sbjct: 1 MADSS--KTEQPTQQRRKKAREKGQVARSRELPGALTIIVVLVWILSLNSVALFTWRGFY 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + L + L Q + A ++P++ + S ++ GG VFS ++L Sbjct: 59 RSLLQQAALQELTLSPALLQ-KTIWVAAQWTVVPMLGAFAIAT-ASTLLQGGFVFSSEAL 116 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 K +L+P +K++FSA + LK++L + + + W +RL Sbjct: 117 AWKPERLSPGHRLKQIFSAAGLSNTLKSLLPFAAILWLAVSQIRSEWVTFIRLGGLPVAR 176 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + L ++ D Q L+MSR++I+ EFK+SEG+P VK Sbjct: 177 IGSWLLAQCVALVWKCCLVLLLWSALDYLLQRQRLEGDLKMSREEIKQEFKESEGNPQVK 236 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +IR+MQR R++M+ V A V+V NPTHY++AL+Y + +AP +VAKG +A I Sbjct: 237 AKIRRMQRQVRRQQMLHAVKAATVVVTNPTHYALALEYRPD-FAAPVLVAKGLDRLAEEI 295 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 +++ + +P +E LA ALYR E+GQ IP +L+ AVAEVLA V++ Sbjct: 296 KQVAIWHEIPLVENRALAHALYRSVEVGQAIPSKLFTAVAEVLAAVYR 343 >UniRef50_A1B5B9 Type III secretion exporter n=3 Tax=Rhodobacterales RepID=A1B5B9_PARDP Length = 368 Score = 330 bits (847), Expect = 6e-89, Method: Composition-based stats. Identities = 112/366 (30%), Positives = 173/366 (47%), Gaps = 1/366 (0%) Query: 1 MS-DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 MS + +DDK T +L KAR+EG +PRS EL S L+ L F + GM Sbjct: 1 MSRENNDDKQFDATESKLRKARQEGDVPRSAELQSALMYLGFWFAALFATIWAVPAWLGM 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + L + + + L +A L + ++ + L L+ V +V + K Sbjct: 61 AARVLGGEPWPDAEGRAVADLARALAGQAGLVTVAGVAIMALPILLGMVAQRSVVLTPKK 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L P F ++NP+ + F ++ K +LVG F +M A + Sbjct: 121 LLPDFKRVNPVKNAAQKFGKSGLVTFAISLGKALLVGVGGWFLYASLLAWLMTSGAMRDL 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + ++ LL + D+ ++ +LK+ RMSRQ+++DE K++EGDPH+ Sbjct: 181 QWVEGLGLILRRAVLLALGIGAIFAIIDLIWKRLEYLKRHRMSRQEMQDEHKENEGDPHL 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K RQ M+ADV KADVI+ NPTHY+VAL++ AP +AKG VA R Sbjct: 241 KAARRQKGVDIVLSAMLADVQKADVIIVNPTHYAVALEWKRGSGRAPVCLAKGVDDVARR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 IRE ++ VP PP ARAL+ EIGQ+I + +A VA + + +++ G Sbjct: 301 IRERAQDHRVPIWSDPPCARALHATVEIGQEIKAEHFAPVAAAIRFAEAMRKKAREGWGS 360 Query: 360 PVQPTH 365 P + Sbjct: 361 PPRRRE 366 >UniRef50_B0SDH0 Endoflagellar biosynthesis protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SDH0_LEPBA Length = 444 Score = 330 bits (846), Expect = 7e-89, Method: Composition-based stats. Identities = 99/353 (28%), Positives = 186/353 (52%), Gaps = 4/353 (1%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 + + +TE P+ R + +E+G +P+S E+ S ++LL G V++ G + + + + Sbjct: 90 AAADEGRTEPPSERRRREEKEKGNVPKSNEVASTMVLLGGTGVLFLLGDTFIKNTAIFIK 149 Query: 62 AGLHF-DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L H + + ++ L P+++ ++ A++ V+ G +FS ++L Sbjct: 150 KYLPMGMHHERFGAEEFRVILSGVSKDFFNLLWPVLAITLVFAIVGNVVQVGFMFSPRAL 209 Query: 121 QPKFSKLNPLPGIKRMF-SAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 +F +++P KR+ + QT L+K++ K +L+G ++ + + +++ + Sbjct: 210 SFRFDRISP--NFKRVLPNRQTLFNLVKSLAKVVLIGVISYILISGDFLKVLLTGNMGMM 267 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+ + L ++ + D FFQ + L+ + + + E K+ GDP + Sbjct: 268 QAITLVTYSGFKIMMAAGLLLLGIAVADFFFQKSEFEESLKQTPSEAKREMKEDSGDPVM 327 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K R Q+ R + M+ +VPKADV++ NPTHYSVAL Y+ + SAP+V+AKG +AL Sbjct: 328 KNRRMQLARDMMQGNMLREVPKADVVITNPTHYSVALSYEMGRDSAPRVIAKGENRLALE 387 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 IR I EN+VP +E+P AR LY E+G +IP + + AV ++L + + K+ Sbjct: 388 IRRIARENDVPIVESPKQARLLYAQVEVGDEIPQEFFQAVVQILITLEKFKKK 440 >UniRef50_P35652 Hypersensitivity response secretion protein hrcU n=8 Tax=Proteobacteria RepID=HRCU_RALSO Length = 357 Score = 329 bits (845), Expect = 9e-89, Method: Composition-based stats. Identities = 112/362 (30%), Positives = 178/362 (49%), Gaps = 7/362 (1%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 SD+KTE PT +LE A +G+ +S +LT+ +LL G ++ R +L L Sbjct: 2 SDEKTEQPTDKKLEDAHRDGETAKSADLTAAAVLLSGCLLLALTASVFGERWRALLDLAL 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 D S + I + +L LP+ LVA I+ G+V S K ++ K Sbjct: 62 DVDSSRHPLM-TLKQTISHFALQLVLMTLPVGFVFALVAWIATWAQTGVVLSFKPVELKM 120 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 S +NP G+KR+FS ++ +L+K I+K + V + + P ++ +S + Sbjct: 121 SAINPASGLKRIFSVRSMIDLVKMIIKGVAVAAAVWKLILILMPSIVGAAYQSVMDIAEI 180 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 M L+ + + D Q + ++ RMS+ +++ E K SEGDPH+KG + Sbjct: 181 GMTLLVRLLAAGGGLFLILGAADFGIQRWLFIRDHRMSKDEVKREHKNSEGDPHIKGERK 240 Query: 245 QMQRAAARR-RMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREI 303 ++ R A + V A +V NPTHY+VA++Y + P+++AKG AL +RE Sbjct: 241 KLARELADEAKPKQSVAGAQAVVVNPTHYAVAIRYAPEEYGLPRIIAKGVDDEALALREE 300 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQP 363 A +P + PPLAR+LYR ++ +P L+ VAEVLAWV A G +P Sbjct: 301 AAALGIPIVGNPPLARSLYR-VDLYGPVPEPLFETVAEVLAWV----GEMGASGTPGAEP 355 Query: 364 TH 365 H Sbjct: 356 QH 357 >UniRef50_Q28JK7 Flagellar biosynthetic protein FlhB n=1 Tax=Jannaschia sp. CCS1 RepID=Q28JK7_JANSC Length = 362 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 106/362 (29%), Positives = 172/362 (47%), Gaps = 5/362 (1%) Query: 1 MSDES---DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLS 57 MSD+ DK TP +LE AR++G+I RS++L + ++ + L + L Sbjct: 1 MSDDDTSPGDKPFDATPKKLEDARKKGEIVRSQDLNTAVMYAGFLLSGAILAPWLVQNLG 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQ--IILLIREAMLALLPLISGVVLVALISPVMLGGLVF 115 + L I G I L+ +++A ++ + LIS + L+F Sbjct: 61 QLTQTTLGQAEVIAPLMLGPGGDGPAIGLLSGSLIASAAIVLVPAGLLLISLLAQRALLF 120 Query: 116 SGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 + L PK ++L+P+ K+ + +Q + K+ +K LV +LW ++ + Sbjct: 121 TPSKLMPKLNRLSPISNAKQKYGSQGLFQFAKSAVKLALVSIFLAIYLWARAETILASLY 180 Query: 176 ESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 + + L ++V + D F++ + RM+RQ++ DE K +EG Sbjct: 181 GTAGQLLELLGRLSLDFLMVVAGMTGIIGIIDWFWEWSQLQLRNRMTRQEVMDESKSAEG 240 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DPH+K + R + A +M+ DVP ADV+V NPTHY+VAL++D P VAKG Sbjct: 241 DPHIKQQRRARGQGIAMNQMLGDVPNADVVVVNPTHYAVALKWDRAGGGVPICVAKGVDD 300 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 VA RIRE +E VP PP ARAL+ E+G I Y AVA + + ++ +A Sbjct: 301 VARRIREAASEAAVPIFSDPPTARALHASIEVGAAIQPDQYRAVAAAIRFADLMRSKAVA 360 Query: 356 GG 357 Sbjct: 361 RA 362 >UniRef50_Q1NCU7 YscU; putative type III secretion protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCU7_9SPHN Length = 375 Score = 328 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 103/376 (27%), Positives = 178/376 (47%), Gaps = 19/376 (5%) Query: 1 MS--DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+ ++ DKTE PTP RL AR +G I +S+++ L +++ ++ F +++G Sbjct: 1 MAQKNDGGDKTEKPTPKRLRDARRKGDIAKSKDVGPALGMIMWFLLLLFAAGHAGAQITG 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 ++ L S+ D + + + L ++ L+ +I+ + G + + + Sbjct: 61 LMRDTLGTATSMPFDAAAPV-LGWAALLVLVSVSLLILGPAALIGVIAEFVQVGALVTTE 119 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L+P KLNP+ G+KRMFS ELLK + K L+ ++ G LW + L+ + Sbjct: 120 KLKPSLDKLNPIEGLKRMFSMDNLVELLKTVAKATLILTIAGVILWRSADGFVSLVQAAG 179 Query: 179 I------------TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDI 226 + + + + D + S +KKLRMSR+DI Sbjct: 180 WSPVDHHGDQVASAMLALIRSVSIQLFAWTCAIFLLVAAADRAWAQHSFIKKLRMSRRDI 239 Query: 227 RDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAP 286 + E K +EGDP ++ + RQ+ A + +A +A+V++ NPTH ++AL YD P Sbjct: 240 KQEHKDNEGDPMLRAQRRQLHEEWANQNAVAAAGRANVLLTNPTHLAIALDYDPEDCPVP 299 Query: 287 KVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 V AKG G +A +R VP + LAR ++ +E+G IP + A+AE++ W Sbjct: 300 MVAAKGEGPLAAAMRAEAEREGVPIVRNIGLARGVWGESEVGGPIPRDRFDAIAEIILWA 359 Query: 347 WQLKRWRLAGGQRPVQ 362 R G + PV+ Sbjct: 360 ----RRARDGLEAPVR 371 >UniRef50_Q6MD75 Putative type III secretion pathway protein sctU n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD75_PARUW Length = 357 Score = 327 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 96/346 (27%), Positives = 178/346 (51%), Gaps = 2/346 (0%) Query: 6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLH 65 DKTE TP +L+ A+++GQI +S++L + + V++I SL +L+ L Sbjct: 2 GDKTEKATPKKLKDAKKKGQIAKSQDLPTAFTFIASVAIILALASSLYHQLANFLVGTFR 61 Query: 66 FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFS 125 ++ +I+ LA +P ++ V LV + + G VF+ + + Sbjct: 62 SVNTPELS-GVIVNLFYKANEVIFLASIPTMALVALVGVTITFLTVGPVFAPEVFKFDIK 120 Query: 126 KLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNA 185 K NP+ +K F +T ELLK+++K + + +++ P +++ ++ A+ Sbjct: 121 KFNPVDNLKAKFKLKTLVELLKSVIKISIASYLIYKVMYNSIPVLIQTVSMPISGALIVF 180 Query: 186 MDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQ 245 + L V L I + D +Q + K++ M + +++ E+K SEGDPH+KG+ RQ Sbjct: 181 HAFLVEVVLKVGLFFIVVAVADFIYQKKTFAKEMMMEKFEVKQEYKNSEGDPHIKGKRRQ 240 Query: 246 MQRAAA-RRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + + A + V +A +V NPTH ++A+ Y+ + +AP ++A G ++A RI +I Sbjct: 241 IAQEIAYQEGPTGGVKRAQAVVTNPTHLAIAIGYERHMDAAPYILAMGKDVLAERIVKIA 300 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +N++P L LA L+ EI + +P Y A+AE++ W+ LK Sbjct: 301 EKNDIPVLRNITLAHILWEQGEIYEYVPEDTYEALAEIMRWIASLK 346 >UniRef50_C6XFL0 Flagellar biosynthesis protein FlhB n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFL0_LIBAP Length = 354 Score = 326 bits (836), Expect = 9e-88, Method: Composition-based stats. Identities = 102/353 (28%), Positives = 189/353 (53%), Gaps = 3/353 (0%) Query: 1 MSDES--DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVI-WFGGVSLARRLS 57 MS+ D+KTEAP+ ++E A EG P SRE + +L + + +F + S Sbjct: 1 MSENDAPDNKTEAPSSKKIEDALNEGNAPISREASLFSSILACLIYLLFFFSPGIYSVTS 60 Query: 58 GMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 + + D + I+ + L A ++P + ++ + S ++ V + Sbjct: 61 DLHVLLASATQRKLEDISHIVFLLTHLSLSASRLVIPGLLLFMMFGIGSYLIQRIPVLNL 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 ++P F +++ GIKR++S +K+ +K ILVG++ L ++ M+ ++ + Sbjct: 121 NHVKPSFKRVSLREGIKRIYSINNLVNFMKSFVKIILVGTIITISLTENYFTMLDFISAN 180 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 P + + +A V ++++L + + D+ + KL+MS+Q+I+DE KQS G+P Sbjct: 181 PHSILYHAFFTVRKVLIMILLFIATLTVLDIGWSYHQWYSKLKMSKQEIKDEIKQSYGNP 240 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 +K R + + R+ R +MM +A +I+ NPTHY++AL+Y + + AP +VAKG L+A Sbjct: 241 IIKNRQKSIARSRIRHKMMEATSRATIIITNPTHYALALRYIQTENDAPVLVAKGQNLIA 300 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 ++R+I E+N+P E P LAR+L++ I IP Y AVA+++ ++ K Sbjct: 301 KKMRKIAYEHNIPIFEEPSLARSLFKQVPINSAIPPVFYKAVAQLIYKIYHKK 353 >UniRef50_C0AA48 Type III secretion exporter n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AA48_9BACT Length = 369 Score = 326 bits (836), Expect = 9e-88, Method: Composition-based stats. Identities = 112/353 (31%), Positives = 178/353 (50%), Gaps = 1/353 (0%) Query: 1 MSD-ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGM 59 M++ + D KTE P+ RL +A E GQ ++ EL + +L + ARR++ Sbjct: 1 MAEQDQDQKTELPSEKRLSEAYERGQFAKTPELGIVFMLAAAFGALSMACEDGARRVAEY 60 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + H++ L+ + + AL PL+ V AL+S + G + K+ Sbjct: 61 ATGIFEQLHTVRISSGLVPAPVAMGAVTFAGALAPLMIASVGAALLSGGIQTGFRVTPKA 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L K KLNP+ G R+FS T LK ++ + Sbjct: 121 LGFKPEKLNPVTGFGRVFSKNTLVHGGIDFLKVSVIAFSLWLAARTLLGDPLFTAPVETA 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + ++L + + ++ F ++L M+RQ++++E +QS+GD V Sbjct: 181 YLGEFIHRSLMALLARLLLAMGIIAAISYAYEWFKTHRELMMTRQEVKEERRQSDGDALV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K +R+M R RR+M+A VP ADV+V NPTHY+VAL+Y+ AP V+AKG +ALR Sbjct: 241 KSALRRMARRLMRRQMLAAVPTADVVVTNPTHYAVALKYERGIDKAPVVLAKGDRRLALR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 I+ I AE+ VPT+E +AR L+ E+G+ IPG+LY AVA +LA V++ R+ Sbjct: 301 IKAIAAEHEVPTVEDRAVARLLFATGEVGKPIPGELYQAVAGILAMVYRTHRY 353 >UniRef50_C6CGR8 Type III secretion protein, YscU/HrpY family n=22 Tax=Gammaproteobacteria RepID=C6CGR8_DICZE Length = 361 Score = 324 bits (831), Expect = 4e-87, Method: Composition-based stats. Identities = 95/354 (26%), Positives = 167/354 (47%), Gaps = 7/354 (1%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PTP +L+ AR++G++ +S+++ LLI + +I S +L ++ L Sbjct: 3 EKTEKPTPKKLQDARKKGEVGQSQDVPKLLISFALLEMILALTDSGMSKLQALMQLPLSR 62 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + L IS +L+ ++ + G +F+ ++L+ F++ Sbjct: 63 ISDPFGHAAD--EVFSEALALLATFCLLTISVALLMRIVGGWIQYGPLFAVEALKLDFNR 120 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LNP+ IK+MF+ + ++L +LK +G V + ++ L Sbjct: 121 LNPINQIKQMFTMRKLTDMLTNLLKATTIGLVFWLVVTPQLEWLVELAYGDLTAFWKGVE 180 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 +++ + + ++ + FD Q + LK+ RMS +DIR+E+K SEGDPH+KG + + Sbjct: 181 NVLKSVSRTTLSALLALGVFDFGLQKYYFLKQQRMSHEDIRNEYKNSEGDPHMKGHRKSV 240 Query: 247 QRAA----ARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302 + A R+ V AD+++ NPTHY+VAL Y K P+++ KG A + Sbjct: 241 AQEILNEPASPRVKPKVEDADLLLVNPTHYAVALFYRPGKTPLPRILLKGEDDHARALIA 300 Query: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 + VP + LAR LYR G IP VA+V + QL++ Sbjct: 301 RAHQAGVPVIRFIWLARTLYR-VPEGHYIPRDTLQPVAQVYKVLRQLEKDLPQR 353 >UniRef50_Q12T86 Type III secretion exporter n=1 Tax=Shewanella denitrificans OS217 RepID=Q12T86_SHEDO Length = 352 Score = 324 bits (831), Expect = 4e-87, Method: Composition-based stats. Identities = 106/355 (29%), Positives = 199/355 (56%), Gaps = 5/355 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSDE K+E + ++L +AR+ GQ+ +S EL + +++L+ ++ + SLA+ L ++ Sbjct: 1 MSDE--HKSEQASQYKLNEARKRGQLAKSMELNAWVLVLISLAYFYLFSESLAKELMSVI 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 S L S+ N +L + + L+P S +V+ +++ V+L G VFS + L Sbjct: 59 SRYLQILGSVDIRNNFMLIAF-DIFYPLAVLLVPFFSILVVASIVINVLLNGFVFSFEPL 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PKF KLNP+ G+K++FS + E +K +K LV + +++ + Sbjct: 118 SPKFEKLNPVKGLKKIFSKKNLFEFIKQTIKLFLVALCGYLLFYGVVERLIIASQSHVSS 177 Query: 181 AMGNAMDL-VGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 +G A+ + ++L + P++ DV F + K++ MS +++R+E+K+ EGDP + Sbjct: 178 LLGMALSQETLRLSFYLLLTIFPLIALDVLFTRWDFKKQMMMSHREVREEYKKKEGDPQI 237 Query: 240 KGRIRQMQRAAARRRM-MADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 K + +++Q+ A++ + + V +ADVI+NNPTH SVAL++D M++P VVA G+G++ Sbjct: 238 KSKRKEVQKELAKKLIALGKVKEADVIINNPTHISVALKFDPLTMNSPIVVASGSGVLGK 297 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 IR I ++++ + LAR LY+ IGQ +P + + +A + + + + Sbjct: 298 FIRRIAVKHSLLQVTNISLARRLYKQLAIGQPLPAEYFDELAPIYRKILGMDSKK 352 >UniRef50_C8BNV0 HrcU n=6 Tax=Gammaproteobacteria RepID=C8BNV0_PSESY Length = 362 Score = 322 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 88/352 (25%), Positives = 158/352 (44%), Gaps = 6/352 (1%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +K + TP ++ AR+ GQ+ +S++L LLIL+V + +L ++ + Sbjct: 3 EKNQDATPKQIRDARKRGQVAQSQDLPKLLILVVVSEITLGMADVSMEKLQSLIKLSMTR 62 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + + + + + +L+ L+ M G++F+ ++L+P K Sbjct: 63 MDQPFL--RTVGEVVTQGVWLVAAFAVLSVGVAMLMRLLGSWMQFGVLFAPEALKPSMEK 120 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LNP +K+MF+ ++ L I+K ++ V + ++ L+ +T Sbjct: 121 LNPFSHLKQMFTLRSLTTSLSGIIKAAIIAVVMWMIVEPALGTLVSLVHSDLVTFWHALS 180 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 L + ++ + D Q + H K+LRMS +DI+ E+K SEG+P +KG RQ+ Sbjct: 181 KLFHQILRVTCGILLVLAVADFAIQKYFHAKQLRMSMEDIKQEYKNSEGNPEIKGHRRQL 240 Query: 247 QRAAARRRMM---ADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREI 303 + V ADV++ NPTHY+VAL Y + + P++ K AL + E Sbjct: 241 AHELLNQAPKAPPKPVKDADVLIVNPTHYAVALYYRPGETALPRIHCKNIDAGALALIEE 300 Query: 304 GAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 +P ++ LAR LYR + IP AVA++ + QL Sbjct: 301 AKRERIPVVQCIWLARTLYR-VPQDRFIPRDTLQAVAQIYGVIKQLDDEAKR 351 >UniRef50_Q1D0P0 Type III secretion protein, FlhB/HrpN/YscU/SpaS family n=2 Tax=Cystobacterineae RepID=Q1D0P0_MYXXD Length = 349 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 100/346 (28%), Positives = 160/346 (46%), Gaps = 9/346 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE P+ RL +AR +GQIPRSR L + + G+ + RL Sbjct: 2 SGEKTEKPSAKRLREARRKGQIPRSRLLNASAVTAGGLFGLTAAAPVGMARLQAWTEHLF 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 LG + A P++ G AL+ V GL + ++PK Sbjct: 62 LGQQD--------LGAWQEGLWIAARFCGPVLGGAFAAALLVSVATVGLEADLQHVEPKL 113 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 +++ + G++R+FS + EL K +L LVG++ + P M+ + Sbjct: 114 ERISLVAGMQRLFSWRPWVELAKTLLIVCLVGALVWSDVEEAAPDAMKTAWLGGAEGLSL 173 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 A+ V A + ++ + D H+K L M+R++++ E+K SEGDP KG+ + Sbjct: 174 AVAHVSGLASRLACLLVVLGVGDYALAWRRHIKDLMMTREEMKREYKDSEGDPRHKGQRK 233 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 + R A+ V KA +V NPTH +VAL+YD ++ AP +VAK A +RE Sbjct: 234 ALHRQLAQGGAARGVQKATAVVVNPTHIAVALRYDVDECEAPYLVAKAREGDARAMREQA 293 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 + + PLAR+L ++G+ IP +LY A A VL + Sbjct: 294 RRLGIAVVRDIPLARSLIH-YDVGEPIPEELYQAAAVVLRTAMDAR 338 >UniRef50_O83710 Flagellar biosynthetic protein flhB n=4 Tax=Treponema RepID=FLHB_TREPA Length = 376 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 102/362 (28%), Positives = 188/362 (51%), Gaps = 11/362 (3%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 + E + ++E PT +L KAREEG++P+S++L ++L + ++ + R G+L Sbjct: 21 AAEDEGRSEDPTETKLRKAREEGRVPKSQDLNGAFVMLFTSTSLFLLAPFILRECIGVLR 80 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGG-LVFSGKSL 120 + G + +R M LP+ ++ + + ++ ++FS KS+ Sbjct: 81 FFFTRATTASIQN---TGWFFVFVRYFMKLALPISFVALVSGVAANIVQNKTVLFSVKSI 137 Query: 121 QPKFSKLNP--LPGIKR-MFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 +P+F K++P + KR FS + LLK+++K + V+ F + + + L+ S Sbjct: 138 RPQFKKISPDVIRFFKRSFFSTEGLFNLLKSLIKITAIFFVSYFTIRNDLFMFVSLLGVS 197 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 ++ L G L V L ++ D FFQ + L+MSRQ++++E K+ EGDP Sbjct: 198 LTQSIFYITSLAGKVLLEVSLLLVVFSLPDYFFQRRQFIDSLKMSRQEVKEELKEQEGDP 257 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 V+ +R+ ++ R + ADV++ NPTH++VA+QY+ M+AP VVAKG+ A Sbjct: 258 LVRSYVRKQMQSLVRESAR-NTTDADVVITNPTHFAVAVQYEPAYMTAPTVVAKGSDGTA 316 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 RI+ + E + E PLARALY IG+++P + + A+ + +L +++ Sbjct: 317 YRIKRLAKEAGILIEENKPLARALYTQVAIGREVPYEYFNALVLIFT---KLDKFKTHAQ 373 Query: 358 QR 359 ++ Sbjct: 374 RK 375 >UniRef50_Q44760 Flagellar biosynthetic protein flhB n=23 Tax=Borrelia RepID=FLHB_BORBU Length = 372 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 94/354 (26%), Positives = 186/354 (52%), Gaps = 5/354 (1%) Query: 2 SDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLS 61 S + + +TE PT + +KAREEG++ +S E+ + + LL+ ++ +F A L + Sbjct: 19 SADDEGRTELPTDQKKQKAREEGRVLKSTEINTAVSLLLLFALFFFMLSYFALDLIAVFK 78 Query: 62 AGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQ 121 ++ + IR M ++ + V ++ G + KSL+ Sbjct: 79 EQAIKLPEVMRM--SVYTMGFAYIRSIMGYVVLFFFASLAVNFFVNIIQVGFFITFKSLE 136 Query: 122 PKFSKL--NPLPGIKR-MFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 P++ K+ N K FSA L K++LK +++ + F + ++ ++ +L + Sbjct: 137 PRWDKISFNFSRWAKNSFFSAGAFFNLFKSLLKVVIICLIYYFIIENNIGKISKLSEYTL 196 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + + + + V+ + + FD FQ +++ L+M++++++ E K+ EGDP Sbjct: 197 QSGISIVLVIAYKICFFSVMFLAIVGVFDYLFQRSQYIESLKMTKEEVKQERKEMEGDPL 256 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 ++ RI++ R + +P+ADV++ NP H++VA+++D M APKV+AKG +AL Sbjct: 257 LRSRIKERMRVILSTNLRVAIPQADVVITNPEHFAVAIKWDSETMLAPKVLAKGQDEIAL 316 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 I++I ENNVP +E LARALY + ++ ++IP + + V+++L V+ + + Sbjct: 317 TIKKIARENNVPLMENKLLARALYANVKVNEEIPREYWEIVSKILVRVYSITKK 370 >UniRef50_Q0C5I7 FlhB/HrpN/YscU/SpaS family protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C5I7_HYPNA Length = 357 Score = 320 bits (820), Expect = 6e-86, Method: Composition-based stats. Identities = 103/358 (28%), Positives = 172/358 (48%), Gaps = 10/358 (2%) Query: 1 MSD---ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFG----GVSLA 53 M++ +S +K + RL AR++G +P+S+E + ++L + G L Sbjct: 1 MAEQDQDSGEKEFDASEQRLRDARKDGDVPQSKEANAFALILGILIAALILDAVVGPKLF 60 Query: 54 RRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGL 113 S +L G F I G I +LAL PL+ + + L++ ++ + Sbjct: 61 DDFSRILYHGDAFAADIFEGDG---GATWAWIATTLLALSPLLLVMAALVLVALIIQQSI 117 Query: 114 VFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRL 173 FS K + P K+NP+ IK + + + LK +K + + FL Sbjct: 118 AFSAKKIMPDMKKINPVDNIKNKYGTKGLTDFLKDTVKMLFAAGLGTLFLIQFTRDYYGS 177 Query: 174 MAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQS 233 + + L + D+ Q H KLRM+R+D++ E KQS Sbjct: 178 SSVDTADFYQFTFNQTLRLILYFFAFQFVLAALDLPLQWRIHSHKLRMTREDMKKEMKQS 237 Query: 234 EGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGA 293 EGDPH++ + R+ +R +M+ +V A V++ NPTHY+VAL++D + AP VAKG Sbjct: 238 EGDPHMRQQRREKATKISRGQMLQNVKSATVVMVNPTHYAVALKWDPDSKLAPVCVAKGT 297 Query: 294 GLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKR 351 +A++IRE+ ENNVP PP R++Y E+ Q+I + +AAVA + +V +L+ Sbjct: 298 DHLAMKIRELAIENNVPIYSDPPATRSIYSMVEVDQEIQAEHFAAVAAAIQFVDRLRG 355 >UniRef50_B1K591 Type III secretion exporter n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K591_BURCC Length = 357 Score = 320 bits (820), Expect = 7e-86, Method: Composition-based stats. Identities = 94/348 (27%), Positives = 169/348 (48%), Gaps = 5/348 (1%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 SD+KTE PT +L++AR++G + +S +L + +++LV +++ F L L +S + Sbjct: 2 SDEKTEQPTRRKLKEARKKGTVAKSVDLVAAVLVLVSLALFTFAWHPLLDALHQNISRAI 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 F S + + ++ + +A + L A +S GL S + PK Sbjct: 62 DFCGS-ERSMHTLWSVLMHELANGAIACCAISVAAALAAALSIGAQVGLQVSFDPVMPKM 120 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 +L+P G+K++FS + +LLK +K +++ + + +P + MAE Sbjct: 121 DRLSPAAGLKQIFSKRALIDLLKMSVKAVVIAAALWHVIVSLFPLITSAMAEPLAALSQI 180 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 + + + + D Q + ++ RMS+ +++ E K+ EG+P +K R Sbjct: 181 LWHALLKLLFAAAVLFLVVGVVDWKIQHWLMMRAQRMSKDEVKRELKEREGEPKLKHERR 240 Query: 245 QMQRAAARR---RMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIR 301 + + + V +A+V+V NPTHY+VAL+Y + P V+AKG A IR Sbjct: 241 KRAKELVNGGGESLSGAVGRANVVVVNPTHYAVALRYVRGETPLPVVLAKGIDDAAREIR 300 Query: 302 EIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 + + VP + PP+ARALY + IP +L+ VA +L WV + Sbjct: 301 ALATQRGVPIVANPPVARALY-EVAEHRPIPSELFEVVAAILRWVEAV 347 >UniRef50_B5Y7F6 Flagellar biosynthetic protein FlhB n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7F6_COPPD Length = 343 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 117/352 (33%), Positives = 182/352 (51%), Gaps = 13/352 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M + ++TE P+P RLE+A +EG +P+S ELT + L V V ++ M Sbjct: 1 MPE--GERTEPPSPRRLERAIQEGNVPQSPELTGAIGLFVFVLILRVYYPRFVSSWQRMW 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + P + +L+ LP++ +L +++ ++L G+ K + Sbjct: 59 FGVFY-----SVSPETAAHDL----AVVLLSTLPVLLVPLLAVVLATLVLSGVRLYPKKM 109 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 PK LNP IKR+FS Q+ ++ +LK IL+ V F +M + PI Sbjct: 110 VPKLDGLNPAQNIKRIFSLQSLEQMGIGLLKVILLSVVAYFLAKDRLVGIMS-GTQDPIQ 168 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 M + ++ L +V + + D FQ L+M+++++++E K EGDP VK Sbjct: 169 FMSLSASILTDILLYLVAVYLLIGLADYAFQRRRWWNSLKMTKEEVKEEMKSIEGDPTVK 228 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R+R R A RR +ADV KA V++ NPT Y+VAL+Y++ M AP++VAKGAG +A RI Sbjct: 229 ARLRSRMRQYAMRRSLADVKKATVVITNPTEYAVALRYEKG-MVAPELVAKGAGWLAQRI 287 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 ++ NVP + P LAR ++R E+G I LY AVA VL V + KR Sbjct: 288 KDEARRYNVPVVVRPELARTIFRKVEVGDYITPDLYQAVAAVLVEVMKKKRQ 339 >UniRef50_Q16DQ8 Flagellar biosynthetic protein FlhB n=15 Tax=Rhodobacterales RepID=Q16DQ8_ROSDO Length = 362 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 112/360 (31%), Positives = 178/360 (49%), Gaps = 4/360 (1%) Query: 1 MS--DESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 MS DE DK+ TP +L +AR++G+I RS EL + + + G S L Sbjct: 1 MSAPDEEADKSFEATPQKLLEARKKGEIARSTELLTAASYAGFLLALLLFGESGLLELGS 60 Query: 59 MLSAGLHFDHSIINDPNLILGQIIL--LIREAMLALLPLISGVVLVALISPVMLGGLVFS 116 ++ + I G + +I+ ALLP+ L ++ G+VF+ Sbjct: 61 TMAVIIGQSAQIAPLFFEGAGTVPARGIIQSTGSALLPIFVYPALAVMLVLFATRGIVFA 120 Query: 117 GKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAE 176 +QPK SK++ + K F + + + K I+ ++ FL+H +M+ + Sbjct: 121 PTKVQPKLSKISVISNAKNKFGRTGLFQFVLSFSKLIIYSAILAVFLYHRTNEMVAALQT 180 Query: 177 SPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGD 236 +P + + + VV+ + G D +Q F HL+K +MSR+++ DE K SEGD Sbjct: 181 TPQYTVILLAKICIEFLIYVVIVSAIIGGIDAIWQHFEHLRKNKMSRKEVMDETKNSEGD 240 Query: 237 PHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 P++K RQ ++ A ++ +V ADV++ NPTH++VAL++D AP VAKG Sbjct: 241 PYMKQERRQRAQSLAGTQVAVEVAAADVVIVNPTHFAVALKWDRTPGQAPVCVAKGVDET 300 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 ALRIREI EN VP PP ARAL+ IG QI + Y AVA + + +++ Sbjct: 301 ALRIREIATENAVPIHSDPPAARALHATTNIGDQIAPEHYKAVAAAIRFAENMRKQSKGK 360 >UniRef50_Q93PY9 RscU n=4 Tax=Pseudomonas RepID=Q93PY9_PSEFL Length = 365 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 92/358 (25%), Positives = 166/358 (46%), Gaps = 7/358 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD S +K + +L R++GQ+ +S+++ LL L + F + +R ++ Sbjct: 1 MSD-SGEKKHPASAKKLRDQRKKGQVAQSQDVAKLLALTAISEIALFTAETSLQRFQQLM 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L + + + L ++ + LIS M GL+F+ ++L Sbjct: 60 LLPLSRLTQPF--TRALEEVLFEGMTVFFSFALVMVGVAITTKLISSWMQFGLLFAPETL 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + F++LNP+ +K+MFSAQ LL +I K L+ S+ +W ++ L + Sbjct: 118 KLDFNRLNPISQVKQMFSAQQLMNLLMSIAKACLIASILYVVIWPSLDTLINLATSDLQS 177 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + + L + + ++ + D+ K++RM++ ++ E+K EGDPHVK Sbjct: 178 YILALIALFRHLLHVCLGMLLVLALIDLIMVRHFFAKRMRMTQVEVVKEYKDMEGDPHVK 237 Query: 241 GRIRQMQRAAARRRMMADVPK---ADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 G+ R + A+ +PK +D++V NPTH++VAL Y K P +V+KG A Sbjct: 238 GQRRSLAYQLAQEEPKVKLPKLEESDMLVVNPTHFAVALYYRPGKTPLPMLVSKGTDDEA 297 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 + +VP ++ LAR LY ++G IP + AVA + + +L Sbjct: 298 RTLIRRAKAADVPVIQCVWLARTLYTK-KLGASIPRETLRAVALIYRTLRELDDEAKR 354 >UniRef50_Q2SEX3 Flagellar biosynthesis pathway, component FlhB n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEX3_HAHCH Length = 342 Score = 314 bits (806), Expect = 3e-84, Method: Composition-based stats. Identities = 99/333 (29%), Positives = 179/333 (53%), Gaps = 1/333 (0%) Query: 27 PRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIR 86 +S+E++ + L G ++W LA R + S+ D I ++ Sbjct: 2 AKSQEVSHVFALAAGALLLWSVSQDLATRFFSLCQKLFADAASVDFDIITAKAWGIWIVS 61 Query: 87 EAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELL 146 E L PL+ ++++ ++ ++ G VFS ++P ++NP+ G KR+FS + EL+ Sbjct: 62 EVSWILSPLLVVMMVIGVLCSIVQTGPVFSFHPIKPDIKRINPITGFKRLFSIKILFELV 121 Query: 147 KAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGF 206 K ++K L+GSV + L P + L A+S TA+ + + ++ + Sbjct: 122 KNLIKLALLGSVLYWALAGLMPDLFGLTAKSAATALPVFIGYAAGIIFKLTAALLLIALI 181 Query: 207 DVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRR-MMADVPKADVI 265 D+ F + ++ +RM++++++DE K+ EGDPH++ + ++++R +R A VP+AD+I Sbjct: 182 DMLFTRWEFMRNMRMTKKEVKDEIKRREGDPHIRAKRKELERELRKRSGSAASVPEADLI 241 Query: 266 VNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHA 325 + NP HY+V ++YD KM+AP V KG +A +R++ ++ VP ++ PPLAR L++ Sbjct: 242 ITNPEHYAVVVKYDAKKMAAPTVTGKGGDAMAKHLRDLARQHQVPIIQDPPLARYLFKKT 301 Query: 326 EIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 EIG IP + VA L +Q+KR R Q Sbjct: 302 EIGSMIPEDAFVGVARALRRAYQIKRERQGRDQ 334 >UniRef50_C9NP54 Type III secretion protein HrpY n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NP54_9VIBR Length = 352 Score = 311 bits (798), Expect = 3e-83, Method: Composition-based stats. Identities = 97/354 (27%), Positives = 167/354 (47%), Gaps = 12/354 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ +KTE PT +++ +R+ GQ+ ++ ++ LL ++ V+ L L ++ Sbjct: 1 MA----EKTEKPTQKKIQDSRKRGQVAQTPDIPKLLACVLTFEVLVACSEWLMAELKTLV 56 Query: 61 SAGLH-FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + F+ + +L ++ +L ++P ALI G +F+ ++ Sbjct: 57 YMPITLFNQPFEHGFLSVLEVAKHVLFLFILIVIP---VSFFAALIGRWGQFGFLFAPEA 113 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+ F+KLNP +K++FS Q E+L I K+IL+ V L + +L Sbjct: 114 LKLDFNKLNPFSQLKQLFSGQKLTEVLNNIFKSILIFVVFYILLNDLAHAVFKLPNLPLD 173 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+DL A + +L ++ D + F HLK+L+M +Q+++ EFK SEGDP V Sbjct: 174 RMWLAAIDLFIYVARVCLLLLLAPAILDFALKKFFHLKQLKMDKQEVKQEFKDSEGDPFV 233 Query: 240 KGRIRQMQRAAARRRMM---ADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLV 296 K + RQ+ A + + D++V NPTH++V L Y+ P V AKG Sbjct: 234 KSQRRQLGMELVEGSPQTTNASMDEMDMLVVNPTHFAVGLHYNPGVTPLPVVGAKGKDRE 293 Query: 297 ALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 AL + + + VP + LAR LY+ E+G I AVA + + + Sbjct: 294 ALELIQQADHSGVPVIRYVWLARTLYQQ-ELGSYINRDTLDAVASLYTLLNDMD 346 >UniRef50_A6CGV2 Flagellar biosynthetic protein FlhB (Fragment) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CGV2_9PLAN Length = 323 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 100/316 (31%), Positives = 174/316 (55%) Query: 37 ILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLI 96 ++L +V++F V L+ + ++ L + D L++ + +I + L ++ Sbjct: 2 MMLATAAVLYFFAVRLSSDMKNLMEVSLTTPVWLRVDQPLLIERCESIIELFLEGTLVMM 61 Query: 97 SGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVG 156 + + A+ ++ G + + LQ K+ +LNP+ G KR+ S + +L ++ K L+ Sbjct: 62 VVLFVSAVFLNIVQVGFMMTPDVLQLKWERLNPIEGAKRIISIRGLVKLGVSLGKISLLV 121 Query: 157 SVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHL 216 + +F + +P + LM P T + + + LL+ L +I + G D FQ + H Sbjct: 122 LIAVWFSYLVFPGFLGLMGAPPETILRDIFNSTIELGLLLALALIILGGLDYAFQKWKHE 181 Query: 217 KKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVAL 276 K L MS+Q+IR+E K +GDP ++ R R+ R A + ++ V ADV++ NPTH S+A+ Sbjct: 182 KDLMMSKQEIREEMKSMDGDPLIRQRRREAHRKLAMSQELSKVESADVVITNPTHISIAI 241 Query: 277 QYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLY 336 +YD M AP VVAKGAG +A +IR+I E+ +P +E LAR +YR + GQ+IP +LY Sbjct: 242 KYDPESMPAPVVVAKGAGEIAFQIRKIANEHGIPIIERKALARQMYRDVKTGQEIPFELY 301 Query: 337 AAVAEVLAWVWQLKRW 352 E++A+V+ L Sbjct: 302 EVFVEIMAYVYSLTGK 317 >UniRef50_A3P7C2 Type III secretion protein, YscU/HrpY family n=37 Tax=Burkholderia RepID=A3P7C2_BURP0 Length = 420 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 96/334 (28%), Positives = 169/334 (50%), Gaps = 3/334 (0%) Query: 17 LEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNL 76 L+K RE+GQ+ +S+++ + L + V+ L LS + L F P Sbjct: 74 LKKVREKGQVAKSKDIADAMTLAAAIGVLTACESMLTGGLSRAVRTALDFVR-GERTPQA 132 Query: 77 ILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRM 136 L + L A+L +LP ++ ++ ++S G + + + + PKF +NP+ GIKR+ Sbjct: 133 TLAALHDLAASAVLTMLPFVAAAIVAGIVSQAPQAGFLITLEPVMPKFDAINPMAGIKRI 192 Query: 137 FSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLV 196 FS ++ EL+K I+K +++ V + +P ++ + E+ ++ V Sbjct: 193 FSLKSLLELVKMIVKALVLACVAWKMMTSLFPLVVASVYEATPQLARVLWTVLMKLLGTV 252 Query: 197 VLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAA-RRRM 255 + V + D +++ RM++++++ E K+S+GDPH KG R++ R A Sbjct: 253 SVVVAVLAAADYKIARVMFVRENRMTKEEVKREHKESDGDPHTKGERRRLAREIATSAPP 312 Query: 256 MADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAP 315 V +A+V+V NPTHY+VA++Y ++ P+V+ K AL +R VP + P Sbjct: 313 RQRVGQANVLVVNPTHYAVAIRYAPDEHPLPRVIEKAVDDGALALRRHAHALGVPIVGNP 372 Query: 316 PLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL 349 +ARALYR E IP +L+ VA +L WV L Sbjct: 373 SVARALYR-VERDASIPEELFETVAAILRWVESL 405 >UniRef50_A4WVT4 Type III secretion exporter n=4 Tax=Rhodobacteraceae RepID=A4WVT4_RHOS5 Length = 359 Score = 309 bits (793), Expect = 9e-83, Method: Composition-based stats. Identities = 117/356 (32%), Positives = 185/356 (51%), Gaps = 1/356 (0%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ +DK P+ +LE+AR +G++P+S++L + + G +R+ M Sbjct: 1 MSEGDEDKPHEPSQRKLEEARRKGELPKSQDLVTAASYGGLLLAALGLGQGAIQRMGDMG 60 Query: 61 SAGLHF-DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 ++ L D + Q+ L+ +L +LP + L A+ + V LV + Sbjct: 61 TSLLGQADRFSTLLSDKAQPQVGGLLVSVLLTVLPFFAIPALAAVAALVAQRALVVAPTK 120 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L PK +++P+ G + F E K+++K +LV V F+ H M+ ++A +P Sbjct: 121 LAPKTERISPVSGFRNRFGRNGLFEFAKSLVKLLLVAVVFALFITFHMAGMLDMLAMAPG 180 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 A+G L+ +VVL + D F+Q HL++ RMSR+++ DE K +EGDPHV Sbjct: 181 LAVGRMFMLMLEFLAIVVLLSGGIGLIDYFWQRAEHLRRHRMSRKELTDEAKDAEGDPHV 240 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K + RQ A RM+ DV ADV+V NPTHY+VAL++ AP VAKG +A R Sbjct: 241 KAQRRQKAMEIATNRMLQDVVGADVVVVNPTHYAVALRWKRGDRRAPLCVAKGTDEIAAR 300 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 IRE AE VP PP ARAL+ +G++I + Y AVA + + +++R Sbjct: 301 IRERAAEAGVPIHRDPPTARALHAAVRVGEEIRPEHYKAVAAAIRFSERIRRRMKG 356 >UniRef50_Q2NVH8 Type III secretion apparatus SpaS n=7 Tax=Enterobacteriaceae RepID=Q2NVH8_SODGM Length = 370 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 77/386 (19%), Positives = 170/386 (44%), Gaps = 24/386 (6%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ +KTE PT R ++ ++GQ + +++T+ ++L+ G++ + +G Sbjct: 1 MA----EKTEKPTEKRSRESAQKGQSFKVKDVTTTVVLIGGIAYLGYGMD---------F 47 Query: 61 SAGLHFDHSIINDPNLIL--GQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 + F ++++ + + +I L M LP+++ + S ++ +V + K Sbjct: 48 QPFIAFYNNVVLNGERLSYQAYLISLAMLFMQLTLPIVAVCFIAGTFSTLLQTRMVIATK 107 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +++ F LNP+ G+KR+F+ + EL+K + + +F H+ +++ + + Sbjct: 108 AIKLNFDALNPVKGLKRIFNLRAVKELVKTLCYVAVFVVGVNYFQSHYLKELLSIYHGNI 167 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + +L + V + ++ D + F K ++M + +++ E K++EG+P Sbjct: 168 WQVIRIWSELAVKLVFIYVGVSLIVLVLDGLCEYFLQFKDMKMEKHEVKQEHKENEGNPE 227 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K R A + +++I+ NPTH ++ + ++ + P + + + A Sbjct: 228 IKSARRNAHFELLSGAEQAAIRSSEMILANPTHIALGIFFNPDVAMLPFITLRATNMKAR 287 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQI--PGQLYAAVAEVLAWVWQLKRWRLAG 356 I + VP + + PLAR LY++ + I + +L W LK+ AG Sbjct: 288 AIIAYAEKVGVPVVRSIPLARRLYKNYTVHSFISLNDNDLIEIMRILIW---LKQVESAG 344 Query: 357 GQRPVQPTHLPVPEALDFINEKPTHE 382 P Q VP + E Sbjct: 345 QPEPEQN----VPPEPSSEEKSSPKE 366 >UniRef50_Q2NR69 Type III secretion apparatus n=5 Tax=Enterobacteriaceae RepID=Q2NR69_SODGM Length = 352 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 82/348 (23%), Positives = 159/348 (45%), Gaps = 7/348 (2%) Query: 7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHF 66 +KTE PTP RL A ++GQ +SR++ ++L GV + + L + + Sbjct: 3 NKTEKPTPKRLRDAAKKGQAFKSRDVIIACMMLCGVCWLTSF--TSLESLMDLYRQMVVG 60 Query: 67 DHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSK 126 + S+ L+ A+ LLP+I+ ++ + + ++ G + + ++ + F Sbjct: 61 NFSLSLT-----AYRNALMFTALQILLPIIAMGIVASALPLLLQTGFMLATRAFKLNFQA 115 Query: 127 LNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAM 186 LNP GIK++FS +T + +KA+L H + + +P + Sbjct: 116 LNPTRGIKKIFSLRTAKDCVKALLYLAAFAIALMIVWRTHRQLLFEQLFANPQDIVAIWR 175 Query: 187 DLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQM 246 L+ L +L ++ +V D+ + F HL+ L+M +Q++R E K+ EGDP +K R R+ Sbjct: 176 QLLMSLVLTCLLCIVCIVILDIVAEYFLHLRSLKMDKQEVRREMKEQEGDPEIKHRRREA 235 Query: 247 QRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAE 306 + AD+ + +I+ NPTH +V + ++ + P + AL +R+ + Sbjct: 236 HMEILSEQTQADIKGSQLIIANPTHLAVGIYHNPDLTPLPFISVLERNQRALAVRDYAKK 295 Query: 307 NNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRL 354 V +E LAR +Y + + V +L+W+ ++ Sbjct: 296 VGVSVIEDVQLARRIYYTHHLYSFVKINELDQVLRLLSWLQDVENAGR 343 >UniRef50_C0QXX4 Flagellar biosynthesis protein FlhB n=2 Tax=Brachyspira RepID=C0QXX4_BRAHW Length = 400 Score = 307 bits (788), Expect = 4e-82, Method: Composition-based stats. Identities = 105/362 (29%), Positives = 192/362 (53%), Gaps = 7/362 (1%) Query: 2 SDESDDKTEAPTPHRLEKAREE-GQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 + E + +TE PT + KAREE G++ S E+ L+L V ++VI ++ Sbjct: 39 APEDEGRTELPTERKKRKAREEEGRVVNSAEINQTLVLAVSIAVIALLTTYFTHTVAQFF 98 Query: 61 SAGLH--FDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 L+ + + ++ + +++ ++V + + +F+ K Sbjct: 99 ITVLNKISNADASINNTAYTDMLLEIFVLLAKTAGIIMAVALVVGVGVNLAQTQFLFTTK 158 Query: 119 SLQPKFSKLNPL-PGIK-RMF-SAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMA 175 L+P F ++ P K R+F S+Q L K + K I++ +T ++ ++ ++ Sbjct: 159 KLKPNFKRIAPTWSNFKERVFISSQNLMNLAKILFKMIVISLLTFTTIYGKRTELFNMIN 218 Query: 176 ESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEG 235 AM +V V++ +I + FD FFQ ++ L+M++ ++++EFK+ EG Sbjct: 219 MGLSQAMNLFFFIVLEMLAKVIIFMIIVSAFDYFFQKRQYINSLKMTKHEMKEEFKEMEG 278 Query: 236 DPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGL 295 DP VK ++++M R R M+ VP+ADV++ NPTH++VAL+Y+ AP V AKGA Sbjct: 279 DPLVKSQLQEMARKIVSRTMLKSVPEADVVITNPTHFAVALKYENG-DYAPIVTAKGADH 337 Query: 296 VALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLA 355 +AL+I+EI +N+V +E PLAR LY + E+GQ IP +L+ V+ +L V++++ ++A Sbjct: 338 IALKIKEIARQNDVQIVENKPLARELYYNVELGQYIPEKLFHVVSRILGEVYRIRNEKMA 397 Query: 356 GG 357 Sbjct: 398 RA 399 >UniRef50_A2WHV2 Flagellar biosynthesis pathway component FlhB n=3 Tax=Proteobacteria RepID=A2WHV2_9BURK Length = 392 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 79/351 (22%), Positives = 164/351 (46%), Gaps = 12/351 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIW-FGGVSLARRLSGM 59 MS + KTE TP + + E GQI ++R+ ++L GV V+ + + M Sbjct: 1 MS--AQSKTEEATPKKRRDSAERGQILKARDAVVACVMLCGVFVVSKMSLHEIGAVMIDM 58 Query: 60 LSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 + G D S + L+ + + P++ +L A + +M V + K+ Sbjct: 59 MQNGFDVDTS---------SYVKSLLVACLKVVAPVLLVCILAAAVPSLMQSKFVLATKA 109 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 L+ F LNP+ G K++F+ +T + +K++L ++ + +++ Sbjct: 110 LKINFEALNPVRGFKKIFNLRTVKDFVKSLLYLVVFSVAVSIVWVRNKEKLLAQFYSDLH 169 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 +G DL+ L + + ++ DV ++ H K+LRM++++++ E K++EG P + Sbjct: 170 GVVGLWKDLMVDLVLTCLGCALVILILDVLVEMLIHRKELRMAKEEVKRERKENEGSPEI 229 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 KGR ++M + + D+ + +I+ NPTH +V + ++ + + P V AL Sbjct: 230 KGRRKEMHQELLSEQDKHDIQNSKMIIANPTHVAVGIYFNPSHLPYPLVSISERNQRALA 289 Query: 300 IREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 +R + VP + PLAR +Y+ + + + + V ++ W+ ++ Sbjct: 290 VRRYAEKIGVPVIVDVPLARQIYKSHKRYEIVSLDVLEPVVRLMVWLRDVE 340 >UniRef50_A3VS81 Flagellar biosynthetic protein FlhB n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VS81_9PROT Length = 355 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 93/359 (25%), Positives = 173/359 (48%), Gaps = 11/359 (3%) Query: 1 MSDESDD--KTEAPTPHRLEKAREEGQIPRSRELTSLL----ILLVGVSVIWFGGVSLAR 54 M++ D+ K+ TP R+++AR++G + +S E+ IL+ + + +++A Sbjct: 1 MAENQDEAEKSHEATPERIKQARQKGDVAQSPEVLVFARYLGILVALLGFVSALAMNMAT 60 Query: 55 RLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLV 114 L+ ++ +++D + + G + L P+ + + LV Sbjct: 61 SLNVFMARPFEASARLMSDADPLEGFGSSALFFFALMAAPIALV-----IAGLIAQQALV 115 Query: 115 FSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLM 174 F+ ++P +KLNP+ K+ F + ++ +K +V V ++ + Sbjct: 116 FAPNKIKPDLNKLNPVKNAKQKFGKAALTDFVRNTVKITIVMVVGMVIGLAQTGRLTASV 175 Query: 175 AESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSE 234 P L + + V+ G D+ + + ++L+MSRQ+++DE K +E Sbjct: 176 GAPPGLLAEELAGLARIMVITGVILAAIAAGIDLPIKWSQYRERLKMSRQELKDETKSTE 235 Query: 235 GDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAG 294 GDP + ++ R A+ R + DVP ADV+V NP HY+VALQ++ ++ P+ +AKG Sbjct: 236 GDPAQRSERQKRAREIAQNRQLLDVPDADVVVVNPEHYAVALQWNRHRGEVPRCIAKGVD 295 Query: 295 LVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR 353 +ALRIR I E VP AR+LY E+G++I + Y AVA + + +L+ R Sbjct: 296 AIALRIRNIADEAGVPLYRDVQTARSLYAVVEVGEEIRYEHYEAVAAAIRFADKLRAKR 354 >UniRef50_D2LD13 Type III secretion exporter n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD13_RHOVA Length = 353 Score = 300 bits (770), Expect = 5e-80, Method: Composition-based stats. Identities = 110/351 (31%), Positives = 174/351 (49%), Gaps = 4/351 (1%) Query: 1 MSDES--DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSG 58 M+D S D+KTEAP+ RL + ++ P SRE+ S L V + + + Sbjct: 1 MADNSETDNKTEAPSEKRLRDSLDKDGGPSSREVNSAAALFALVLFLMTMAPADFGEVVK 60 Query: 59 MLSAGLHFD-HSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSG 117 LS + + + + L LPL+ ++ L++ Sbjct: 61 NLSVFIEDPSGFSLENGADAFFILQLAGLTIFNFALPLVLMLLAATLLASFAQNPPTLIF 120 Query: 118 KSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAES 177 + P ++++P G+KR+F+ +LLK+ +K +V ++ L Sbjct: 121 NKIAPDLARISPQAGLKRLFAFDAVVDLLKSFIKFGIVAIAFYVAFQGGAAALLVLQT-D 179 Query: 178 PITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDP 237 + + L L+ L + DVF+ F L+KL+MSRQD++DE KQSEGDP Sbjct: 180 SASTIELIKRLAFKAILICALACAVLAVADVFWTRFRWLRKLKMSRQDLKDEHKQSEGDP 239 Query: 238 HVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVA 297 ++ R R + RA RR MM VP A V++ NPTHY+VAL+Y + AP+ +AKG +A Sbjct: 240 MLRARARAIARARVRRNMMTSVPNATVVIANPTHYAVALRYVRGQDRAPQTLAKGKNKLA 299 Query: 298 LRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQ 348 LRIR I +NNVP +E LA++L+ + Q IP + Y AVAEV+ ++ + Sbjct: 300 LRIRSIAEDNNVPVVENKALAKSLHDAVRVDQPIPHEFYKAVAEVIIYINK 350 >UniRef50_D2TZ36 Type III secretion system protein SpaS n=1 Tax=Arsenophonus nasoniae RepID=D2TZ36_9ENTR Length = 345 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 76/348 (21%), Positives = 168/348 (48%), Gaps = 7/348 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PTP +L+ A ++G+ +S++L + L+ + ++ + + + L Sbjct: 2 SANKTEKPTPKKLKDAAQKGKSFKSKDLV--ISCLIFLGCLYLTNYINFTTIIEIWANTL 59 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 +HSI L +L A+ LP + +L+ +++ + G + K L+ F Sbjct: 60 KNNHSITP-----LNYTFVLFFTALKIFLPFLFLCILIIMLTTMAQTGFKIATKVLKFDF 114 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 + LNP+ G+K++FS +T + +K L I+ VT + ++ + + + + Sbjct: 115 NNLNPINGVKKIFSIRTIKDFIKTFLFIIIFFIVTYIYWNNNKKIIFSQIYLNIESVFIV 174 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +LV ++++L ++ D + F H+K L+M + +++ E+K+ EG+P +K + + Sbjct: 175 WKELVSNFIIILLLSSFIILILDAVAEYFIHIKDLKMDKNEVKREYKEQEGNPEIKSKRK 234 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 ++ ++ +D+ + ++ NPTH + + + ++ P V AL R Sbjct: 235 ELHVEILSEQVKSDIESSKFMIANPTHIIIGIYLNPQIVAIPMVSVLETNQRALAARAYA 294 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRW 352 + VP +E LAR +Y ++ I + V ++L+W+ +++ Sbjct: 295 EKEGVPVIENIVLARRIYNTHQLYSFINLEEIGEVIKILSWLQKVENE 342 >UniRef50_B3RAC6 SctU: non flagellar T3S system conserved inner membrane protein. flhB/hrpN/yscU/spaS family n=1 Tax=Cupriavidus taiwanensis RepID=B3RAC6_CUPTR Length = 344 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 89/346 (25%), Positives = 168/346 (48%), Gaps = 5/346 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD +K T +L++AR+ G++PRS ++TS ++ L ++ +W G R + Sbjct: 1 MSDS--EKNLEATRRKLDEARKRGEVPRSSDVTSAVVFLGVLAGLWLLGRYFVRLFQSLW 58 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + + + D +++ R ++ +LP++ ++ ++ + G + + + + Sbjct: 59 HSAMGSVPQHLADQQMLV-LGEAAARFLLMGVLPIVGLALVCGIVGAFLQVGPLVAFEQI 117 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 +P ++LNP G+KRMF+ + L K ++K +L+ + +R P Sbjct: 118 KPDLARLNPAEGLKRMFAVRNLVNLAKILVKILLLAGLVYVLALGAIEDGVRTGYARPAE 177 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + ++ + + M D + +K+ RMS + R E+K+++GDP + Sbjct: 178 ILLLVAYIILRMCCWAAVIYLVMAVVDYVHERHQFMKRQRMSVDEYRREYKETQGDPIMA 237 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 GR R AA + V + +V T Y+VAL+YD + P+VVAKG+G VA RI Sbjct: 238 GRRRAAFFEAAFFGVSERVRVSTAVVY-STQYAVALRYD-GPGTLPRVVAKGSGQVAARI 295 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWV 346 R+ A+ VP+ LA+ LY + + + I L+ VAE++ W Sbjct: 296 RQAAADYLVPSAFDSDLAQRLYLNVPLDRFIDRTLFERVAELMRWA 341 >UniRef50_P40702 Surface presentation of antigens protein spaS n=62 Tax=Enterobacteriaceae RepID=SPAS_SALTY Length = 356 Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats. Identities = 74/364 (20%), Positives = 163/364 (44%), Gaps = 11/364 (3%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 S +KTE PT RLE + ++GQ +S++L + L G++ + G G++ + Sbjct: 2 SSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSF--NEFMGIIKIII 59 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 N + + + + L+P + ++ + + ++ G V + ++L+P Sbjct: 60 A-----DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNL 114 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 S LNP+ G K++FS +T + +K +L + ++ + + + Sbjct: 115 SALNPVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVI 174 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 +L+ L + + ++ D + F +K ++M +++++ E K+ EG+P VK + R Sbjct: 175 WRELLLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRR 234 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 ++ ++ +D+ + +IV NPTH ++ + + M P + AL +R Sbjct: 235 EVHMEILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYA 294 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQPT 364 + VP + LAR+L++ + + V +L W+ +++ G+ +QP Sbjct: 295 EKVGVPVIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVEN----AGKDVIQPQ 350 Query: 365 HLPV 368 V Sbjct: 351 ENEV 354 >UniRef50_B8HEI9 Type III secretion exporter n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HEI9_ARTCA Length = 359 Score = 293 bits (752), Expect = 6e-78, Method: Composition-based stats. Identities = 127/357 (35%), Positives = 186/357 (52%), Gaps = 6/357 (1%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MSD S ++TE T R+ R +GQ+ RS++LT+ L + G ++ + + Sbjct: 1 MSD-SQERTEQATDKRMRDVRSKGQLSRSQDLTAWLGVGAGAVMLPATIDRASNAAVDQV 59 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 + S DP + + L + L P+ V LV L + GG+ F K Sbjct: 60 FSVRAIMESP--DPAKAVHALELGLGSMAGVLAPMFVVVFLVVLAGSAVQGGVHF--KKF 115 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + +F N L G+KR+F Q LKA+LK ++VG V + P ++ Sbjct: 116 RAEFEHFNLLSGMKRLFGMQAVWGGLKALLKAVVVGIVLYSVVQGLIPVLLTAGGLPVSG 175 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + A D +G V + + DV + + KK RMS++++ DE K +EGDP V+ Sbjct: 176 VIAAAADGIGALVQCAVAAGLVLAAVDVLVVMRRNRKKTRMSKKEVTDENKNTEGDPLVR 235 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R Q A +R RM+A + ADV++ NPTH +VAL+YD K SAP+VVAKGAG++A RI Sbjct: 236 SHRRSRQLAMSRNRMIAAIADADVVLVNPTHVAVALKYDAGK-SAPRVVAKGAGVIAARI 294 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGG 357 R VP ++ PLARAL+ E+GQ+IP +LY AVA VLA+V LK A G Sbjct: 295 RAEAEAKEVPMVQDIPLARALHSACELGQEIPVELYRAVAGVLAFVMSLKSRGAARG 351 >UniRef50_Q9KKG9 YsaU n=9 Tax=cellular organisms RepID=Q9KKG9_YEREN Length = 374 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 76/382 (19%), Positives = 171/382 (44%), Gaps = 12/382 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ +KTE PT ++ + ++GQ +S+++ + ++ + G S L +L Sbjct: 1 MA----EKTEKPTDKKIRDSAKKGQSFKSKDMVAAVV--LVAGAFAISGFSSLYGLGSLL 54 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L I + + L + A++P++ L I ++ + +++ Sbjct: 55 QRILLSPSDI-----GVEALLDKLYSLFLQAVVPVLLACFLPGAIISLLQSRFRLATEAV 109 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + FS LNP+ G K++F+ ++ EL+KA L ++ + F ++ L + Sbjct: 110 KIDFSHLNPISGFKKIFALRSLKELVKAFLYLLVFATSAAVFFIFWRQEIFMLYRTTING 169 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + L ++ + + ++ D + F +K L+M +Q+++ E+K ++GDPH+K Sbjct: 170 MISQWAHLCITFIMVFLAVALLILLIDTLTEFFLFMKDLKMEKQEVKKEYKDNDGDPHIK 229 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R + + + ++V + ++ NPTH ++ + Y+++ P ++ K GL A + Sbjct: 230 SARRGLHQEILSEEVKSNVRGSTFVMANPTHIAMVIYYNDDIAPLPYLMMKTRGLQAKAV 289 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 VP + P+AR L+R+ I Q V ++ W+ +++ ++ Sbjct: 290 IAYAESQGVPVVRDIPVARQLWRNYRKDSFINDQGLDDVMHIINWLVRVELVKMGIDVD- 348 Query: 361 VQPTHLPVPEALDFINEKPTHE 382 L A D + ++ T++ Sbjct: 349 AALEQLEADNAADPLAQEETND 370 >UniRef50_C4UMD4 Putative uncharacterized protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UMD4_YERRU Length = 386 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 83/378 (21%), Positives = 173/378 (45%), Gaps = 21/378 (5%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ +KTE PT ++ + ++GQ + ++L + +L+ G + G S L +L Sbjct: 1 MA----EKTEQPTDKKVRDSAKKGQSFKGKDLIAAAVLVCGA--LAISGFSSLTALGHLL 54 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L I I + L R + A++P++ +L ++ ++ + ++L Sbjct: 55 QKVLLSPSEI-----KISAYLDELYRLFLYAVIPVLLCCLLPGMLLSLLQSRFRLATEAL 109 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + FS LNP+ G K++F + EL+KA+L + G+ F+ ++ L Sbjct: 110 KINFSHLNPISGFKKIFGIRPLKELVKALLYLLAFGTSIYTFILLWRREVFMLYHAELEE 169 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 + L + + + + ++ D ++F +K L+M +Q+++ E+K++EGDP +K Sbjct: 170 MITQWGRLCIIFIFVFLASSLILLLLDTLTELFLFIKDLKMEKQEVKKEYKENEGDPQIK 229 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 +++ R + + V++ NPTH ++ + +D + P ++ K A + Sbjct: 230 QARKEIHREILSEETKNGIKNSQVVMANPTHIALGIYFDPSVAELPLIIVKAQNAQARAV 289 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP 360 E +P + PLAR LYR+ I I + +L W+ +++ +L Sbjct: 290 IAYAEEQGIPVVRDIPLARRLYRNNSIFSFIRDDDLLDIMNILIWLKRIELEKLG----- 344 Query: 361 VQPTHLPVPEALDFINEK 378 + +P AL+ IN++ Sbjct: 345 -----ISLPSALESINQE 357 >UniRef50_C2LLU2 Possible flagellar biosynthesis protein FlhB n=4 Tax=Proteus RepID=C2LLU2_PROMI Length = 353 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 80/352 (22%), Positives = 156/352 (44%), Gaps = 15/352 (4%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ +KTE PT +L+ + ++GQ +S+EL S L+ +GV ++ L Sbjct: 1 MA----EKTEKPTQKKLDDSAKKGQSFKSKELVSGLVYFIGVIYLF---------NQVKL 47 Query: 61 SAGLHFDHSIINDPNLIL--GQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGK 118 F S++ P I + ++ + +LP+I L I + + + Sbjct: 48 DEFNQFYQSLLLHPTGISLKSYVEVISKLFFDIVLPIIIVTFLSGAIPSLFSSHFKLATE 107 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 +++ F+ +NP+ G K++FS +T + LK IL I+ F+ H +++ L Sbjct: 108 AIKIDFNHINPISGFKKIFSIRTIKDFLKTILFIIIFLITCYVFMILHMGEVVILYRADL 167 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 + LV + + IP++ ++ F +K + M + +++ E K EG+P Sbjct: 168 EGVIDKWCSLVVSFIFIFFILSIPILILNIIADFFLFIKDMMMEKHEVKQEHKNMEGNPE 227 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 +K RQ+ + M + + ++ NPTH +V + +D + P V AL Sbjct: 228 IKSVRRQLHQELLDEPMKRVIRDSSAVIVNPTHVAVGIYFDPDNGIMPIVSLSCTNAKAL 287 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 ++ + P + P LAR L+ + + I Q V +VL W+ +++ Sbjct: 288 AVKAYAKKVGTPVIRYPELARKLHHKYHLFEVIIDQDLLDVMDVLIWLKRVE 339 >UniRef50_A5G0E6 Type III secretion exporter n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0E6_ACICJ Length = 335 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 91/328 (27%), Positives = 170/328 (51%), Gaps = 2/328 (0%) Query: 29 SRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREA 88 SRE+ +L L V ++V+ S A RL+ L++ + ++ + + + Sbjct: 9 SREVATLASLGVALAVMIGVLPSSAERLANTLASAFTRA-ATVDSGAGLSRALWQAGMAS 67 Query: 89 MLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKA 148 + +P + L A++ ++ G + ++ F++LNPL GI ++F A ++ Sbjct: 68 LGVFIPFAGAIALSAIVVSLLQTGFRTNWGAIGLNFARLNPLAGIGKLFGTPNLAASGQS 127 Query: 149 ILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDV 208 ILK +G+ + + ++ S T + + V+ + D Sbjct: 128 ILKLAAIGAALYVVMDARLHGLEAMLLGSEKTLLAAIFGSIVAILSAAVMIQVVSGAVDF 187 Query: 209 FFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNN 268 ++MSRQ+++DE K+++GDPHV+ RI+ + A A+R + + +A V++ N Sbjct: 188 VLVRNRFSTSVKMSRQEVKDEQKETDGDPHVRARIKAARSALAKRSLNVAMARAAVVITN 247 Query: 269 PTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIG 328 PTHY+VAL+Y + APK+VAKGA A RIR++ E +P + PPLARAL++ ++ Sbjct: 248 PTHYAVALEYRAGQAEAPKIVAKGADERAARIRDLAREARIPIVANPPLARALFQQ-DVE 306 Query: 329 QQIPGQLYAAVAEVLAWVWQLKRWRLAG 356 +I + Y AVAE++A++W+L +++ Sbjct: 307 TEILPEHYRAVAEIIAYIWKLAERQMSR 334 >UniRef50_Q3JL20 Secretion apparatus protein bsaZ n=37 Tax=Proteobacteria RepID=BSAZ_BURP1 Length = 411 Score = 286 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 75/383 (19%), Positives = 156/383 (40%), Gaps = 15/383 (3%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 M+ +KTE PT +L A ++GQ ++R++ +L+++ G A L + Sbjct: 1 MA----EKTEKPTAKKLRDAAKKGQTFKARDIVALIVIATGALA--------APALVDLT 48 Query: 61 SAGLHFDHSIINDPN-LILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKS 119 F + + P + + ++ + +S Sbjct: 49 RIAAEFVRIASTGAQPNPGAYAFAWAKLFLRIAAPFVLLCAAAGALPSLVQSRFTLAVES 108 Query: 120 LQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPI 179 ++ + L+P+ G+KR+FS ++ + +KA+L + F + + L P Sbjct: 109 IRFDLTALDPVKGMKRLFSWRSAKDAVKALLYVGVFALTVRVFAGLYHADVFGLFRARPA 168 Query: 180 TAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHV 239 + L LL +L +P++ D + F + ++L+M + +++ E+K+SEG+ + Sbjct: 169 LLGHMWIVLTVRLVLLFLLCALPVLILDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEI 228 Query: 240 KGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALR 299 K + R++ + + A+V ++D IV NPTH ++ + + + + P V + AL Sbjct: 229 KSKRREIHQELLSEEIKANVEQSDFIVANPTHIAIGVYVNPDIVPIPFVSVRETNARALA 288 Query: 300 IREIGAENNVPTLEAPPLARALYRHAE-IGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358 + VP + LAR++YR++ + V VL W+ +++ GG Sbjct: 289 VIRHAEACGVPVVRNVALARSIYRNSPRRYSFVSHDDIDGVMRVLIWLGEVEAANR-GGP 347 Query: 359 RPVQPTHLPVPEALDFINEKPTH 381 P P Sbjct: 348 PPETRALTSAEPQARDGVAPPGD 370 >UniRef50_D2UDN8 Probable xanthomonas secretion apparatus protein n=1 Tax=Xanthomonas albilineans RepID=D2UDN8_XANAL Length = 358 Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats. Identities = 74/359 (20%), Positives = 151/359 (42%), Gaps = 8/359 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS +KTE PT + + ++G+ ++ ++ ++L+L+VG I F + + Sbjct: 1 MS----EKTEKPTQKKRADSEKKGKSFKAADIGAMLLLIVGGVAIPFLFDF--DSIFSLF 54 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL 120 L D + L A+ + I + ++ L + ++ Sbjct: 55 K--LFGSAVQAKDLPGPFAYVKTLGWVAVKGTVIFIVVCSFATTVPSLIQSRLTLAFDAI 112 Query: 121 QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT 180 + F LNP G+K++F+ + +L+K +L I + F+ +H ++ M Sbjct: 113 RFDFDALNPANGLKKLFNIRVAKDLVKTLLYIITTSAAVAIFIHNHCRELFMTMRMPEFA 172 Query: 181 AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK 240 L L ++ IP++ D + F ++ L+M + +++ E KQS+G+P VK Sbjct: 173 LCSELGHLAKYLCLYMIGMAIPVLVLDCLTEYFLYIHGLKMEKYEVKQEIKQSQGNPEVK 232 Query: 241 GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI 300 R RQ+ R ++ +V + ++ NPTH ++ + D P V + A + Sbjct: 233 SRQRQLSREVLSEKVKENVKGSTFVLANPTHIAIGIYADFKVAPFPMVSVREVDARAREV 292 Query: 301 REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR 359 + + VP L PLAR ++ + Q + + + +L W+ Q++ Sbjct: 293 IDYAMKCGVPVLRDIPLARRIFDRTQRYQFVSTEDLEPIIRILTWLRQVEEAAAPRADA 351 >UniRef50_C3KN95 Translocation protein in type III secretion system, RhcU n=1 Tax=Rhizobium sp. NGR234 RepID=C3KN95_RHISN Length = 345 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 74/346 (21%), Positives = 155/346 (44%), Gaps = 8/346 (2%) Query: 1 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML 60 MS+ S++K+ + ++ AR +GQ+ S ++ S +++L +++ SL ++ +L Sbjct: 1 MSETSEEKSLPASDKKIRDARRKGQVMHSPDMVSGIVVLFSTLFLFYVAPSLQVKIERLL 60 Query: 61 SAGLHFDHSIINDPNLILGQIILLIREAMLA-LLPLISGVVLVALISPVMLG-GLVFSGK 118 H D + ++ + +A+ +LP++ ++ L + V + G VFS + Sbjct: 61 DEASHIYERPFAD---VWYRLSTIAADALWTTVLPILGITIVAILATNVAITKGFVFSAE 117 Query: 119 SLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESP 178 L P F+++NP G+KR+ S ++ + KA+ K + + + Sbjct: 118 PLAPDFNRVNPASGLKRIASLKSVVDFGKALFKIAALSIAFAVVFHAGLGSLFQSPTCGF 177 Query: 179 ITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPH 238 ++ ++ + + + M D+F Q + L+++RM+R + + E K +EGDP Sbjct: 178 ACLHATSLSMLKTITSIAIAAFVVMGAVDLFLQRWLFLREMRMTRSESKREHKDTEGDPL 237 Query: 239 VKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVAL 298 ++ R++ R + A +++ SV ++Y ++ P VV + G A Sbjct: 238 IRQERRKLAR--LLGTTKTGLAGAVLLIGEEGAVSVGIRYVRDETPVPIVVCRAFGPAAS 295 Query: 299 RIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLA 344 +R +P + LA L IG +P +L+ VA L Sbjct: 296 SMRAQARSRTIPFMADAKLAAEL-GKTPIGAPVPDRLFQEVANALV 340 >UniRef50_A7H8A9 Type III secretion exporter n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7H8A9_ANADF Length = 343 Score = 273 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 113/346 (32%), Positives = 174/346 (50%), Gaps = 7/346 (2%) Query: 5 SDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGL 64 + D+TE PTP RL +AR G + + REL L G+ + G S+ R L+ +L A L Sbjct: 2 TGDRTERPTPKRLREARRRGDVAQGRELGGAAALAGGLLALALTGPSMTRELASLLRAQL 61 Query: 65 HFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKF 124 DP +L + L S + A+++ + G VF+ +L P+ Sbjct: 62 QAAAQPSADPAALLHA---ALVTVGRLALAPASAALAAAVLAGALQTGFVFAPGALSPRA 118 Query: 125 SKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGN 184 ++NPL G++R+ S + +L + K ++ V +L P + L G+ Sbjct: 119 ERVNPLRGLRRLLSPASALAVLLGLAKAAVLLGVAVVWLRSAAPSLAGLARLDARALWGS 178 Query: 185 AMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIR 244 ++G +V + DV F H + LRM+R ++R E K+ EGDP + R Sbjct: 179 LP-MLGGLVARLVAAYALLALGDVALARFRHRRALRMTRDEVRREHKEDEGDPAHRAERR 237 Query: 245 QMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIG 304 ++ RA V +A V+V NPTH +VAL++D + AP+VVAKG+G A RIR Sbjct: 238 RLHRALLEAGP---VSRATVVVVNPTHVAVALRHDRDGEDAPRVVAKGSGPAAARIRSAA 294 Query: 305 AENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLK 350 VP + PLARAL+R AE+G +IP +LY A A VLA ++ L+ Sbjct: 295 RRAGVPIVRDVPLARALHRLAEVGDEIPEELYEAAAAVLAHLYGLE 340 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.171 0.516 Lambda K H 0.267 0.0523 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,830,646,692 Number of Sequences: 3077464 Number of extensions: 163179698 Number of successful extensions: 514537 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1053 Number of HSP's successfully gapped in prelim test: 204 Number of HSP's that attempted gapping in prelim test: 511836 Number of HSP's gapped (non-prelim): 1326 length of query: 382 length of database: 1,040,396,356 effective HSP length: 130 effective length of query: 252 effective length of database: 640,326,036 effective search space: 161362161072 effective search space used: 161362161072 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 95 (40.9 bits)