BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (761 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P00452 Ribonucleoside-diphosphate reductase 1 subunit a... 1590 0.0 UniRef50_Q8K9W3 Ribonucleoside-diphosphate reductase subunit alp... 1224 0.0 UniRef50_C8XUI7 NrdA ribonucleoside-diphosphate reductase alpha ... 711 0.0 UniRef50_Q66LW9 Ribonucleoside-diphosphate reductase 1 alpha cha... 483 e-134 UniRef50_Q76Z42 NrdA-A aerobic NDP reductase large subunit n=1 T... 469 e-130 UniRef50_B3RGP4 Ribonucleoside triphosphate reductase alpha chai... 434 e-120 UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alp... 357 9e-97 UniRef50_Q8SCK6 PHIKZ306 n=2 Tax=phiKZ-like viruses RepID=Q8SCK6... 355 3e-96 UniRef50_C8WWY9 Ribonucleoside-diphosphate reductase n=15 Tax=Fi... 338 3e-91 UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Bra... 332 4e-89 UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 319 2e-85 UniRef50_A5TVY2 Ribonucleoside-diphosphate reductase n=15 Tax=Fu... 306 1e-81 UniRef50_D1BPH5 Ribonucleoside-diphosphate reductase n=3 Tax=Vei... 306 3e-81 UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subu... 291 9e-77 UniRef50_A9KRT3 Ribonucleoside-diphosphate reductase n=2 Tax=Clo... 289 3e-76 UniRef50_P74240 Ribonucleoside-diphosphate reductase subunit alp... 288 6e-76 UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alp... 283 2e-74 UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=ce... 272 4e-71 UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alp... 269 4e-70 UniRef50_C1FEX6 Ribonucleoside-diphosphate reductase n=4 Tax=Chl... 267 1e-69 UniRef50_A8P6Y3 Ribonucleoside-diphosphate reductase n=1 Tax=Bru... 263 1e-68 UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=ce... 263 2e-68 UniRef50_D1CID8 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 260 2e-67 UniRef50_B9L2K7 Ribonucleoside-diphosphate reductase n=1 Tax=The... 253 2e-65 UniRef50_P48591 Ribonucleoside-diphosphate reductase large subun... 253 2e-65 UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alp... 251 5e-65 UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Ba... 251 8e-65 UniRef50_A2PYM5 Ribonucleoside-diphosphate reductase n=4 Tax=Myo... 249 4e-64 UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Ba... 248 8e-64 UniRef50_C9KMB2 Ribonucleoside-diphosphate reductase n=1 Tax=Mit... 246 2e-63 UniRef50_P23921 Ribonucleoside-diphosphate reductase large subun... 243 1e-62 UniRef50_C1VDU7 Ribonucleoside-diphosphate reductase n=1 Tax=Hal... 243 2e-62 UniRef50_C5LWW8 Ribonucleoside-diphosphate reductase n=4 Tax=Euk... 238 8e-61 UniRef50_A4XD09 Ribonucleoside-diphosphate reductase n=44 Tax=Ba... 233 3e-59 UniRef50_Q2P8D3 Ribonucleoside-diphosphate reductase n=66 Tax=ro... 230 2e-58 UniRef50_C5DEU8 Ribonucleoside-diphosphate reductase n=2 Tax=Sac... 229 4e-58 UniRef50_C7NVI1 Ribonucleoside-diphosphate reductase n=2 Tax=Hal... 227 1e-57 UniRef50_Q8JKL8 Ribonucleoside-diphosphate reductase n=1 Tax=Hel... 220 2e-55 UniRef50_B0R7R5 Ribonucleoside-diphosphate reductase n=2 Tax=Hal... 220 2e-55 UniRef50_B7FY00 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 219 3e-55 UniRef50_Q7T6Y8 Ribonucleoside-diphosphate reductase large subun... 218 6e-55 UniRef50_A7KUZ9 Nrd alpha subunit n=2 Tax=root RepID=A7KUZ9_9CAUD 217 1e-54 UniRef50_D2E8G7 Ribonucleoside-diphosphate reductase n=1 Tax=Ang... 215 6e-54 UniRef50_Q75BW6 Ribonucleoside-diphosphate reductase n=2 Tax=Sac... 214 1e-53 UniRef50_B7XJ88 Ribonucleoside-diphosphate reductase n=2 Tax=Ent... 212 5e-53 UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Ali... 211 7e-53 UniRef50_C5DY80 Ribonucleoside-diphosphate reductase n=1 Tax=Zyg... 208 6e-52 UniRef50_B4UA32 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 208 7e-52 UniRef50_C7NLI3 Ribonucleoside-diphosphate reductase n=1 Tax=Kyt... 207 2e-51 UniRef50_Q9QAL9 Ribonucleoside-diphosphate reductase n=2 Tax=Shr... 205 5e-51 UniRef50_B7KJK7 Ribonucleoside-diphosphate reductase n=4 Tax=Cya... 193 3e-47 UniRef50_B2V806 Ribonucleoside-diphosphate reductase n=2 Tax=Aqu... 184 1e-44 UniRef50_P0A5W9 Ribonucleoside-diphosphate reductase subunit alp... 181 1e-43 UniRef50_B7SW23 Ribonucleoside-diphosphate reductase n=1 Tax=Spo... 180 2e-43 UniRef50_D2BQ84 Ribonucleoside-diphosphate reductase n=32 Tax=La... 180 2e-43 UniRef50_C5WF13 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 179 3e-43 UniRef50_P78027 Ribonucleoside-diphosphate reductase subunit alp... 179 3e-43 UniRef50_C4V8X4 Ribonucleoside-diphosphate reductase n=1 Tax=Nos... 178 6e-43 UniRef50_B8HJ14 Ribonucleoside-diphosphate reductase n=158 Tax=r... 176 2e-42 UniRef50_Q6R7H4 Ribonucleoside-diphosphate reductase large subun... 176 3e-42 UniRef50_O12935 Ribonucleoside-diphosphate reductase n=1 Tax=Spo... 175 5e-42 UniRef50_A7IY07 Ribonucleoside-diphosphate reductase n=3 Tax=Chl... 172 6e-41 UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=ce... 168 9e-40 UniRef50_Q8SCB8 Large subunit ribonucleotide reductase n=6 Tax=u... 166 4e-39 UniRef50_UPI000194E523 PREDICTED: ribonucleoside-diphosphate red... 162 4e-38 UniRef50_Q1IXG5 Ribonucleoside-diphosphate reductase n=6 Tax=Bac... 160 2e-37 UniRef50_P26685 Ribonucleoside-diphosphate reductase large subun... 159 5e-37 UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hyd... 157 2e-36 UniRef50_Q0ILJ1 NrdA (Fragment) n=10 Tax=unclassified T4-like vi... 157 2e-36 UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Cal... 156 3e-36 UniRef50_P50620 Ribonucleoside-diphosphate reductase subunit alp... 151 1e-34 UniRef50_B1V8V8 Ribonucleoside-diphosphate reductase n=61 Tax=Ba... 149 3e-34 UniRef50_B1HSG6 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 147 1e-33 UniRef50_UPI0001792B32 PREDICTED: similar to AGAP010198-PA n=1 T... 145 4e-33 UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyd... 139 3e-31 UniRef50_Q6VMN2 Ribonucleoside-diphosphate reductase n=10 Tax=To... 133 2e-29 UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=ce... 133 3e-29 UniRef50_Q2N7C2 Ribonucleoside-diphosphate reductase n=90 Tax=ro... 133 3e-29 UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Su... 132 4e-29 UniRef50_B7R7T8 Ribonucleoside-diphosphate reductase n=2 Tax=The... 130 3e-28 UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 127 2e-27 UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 126 3e-27 UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=The... 122 7e-26 UniRef50_Q6UDJ2 Ribonucleoside-diphosphate reductase n=2 Tax=Ilt... 122 8e-26 UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 121 9e-26 UniRef50_D0ME23 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 120 3e-25 UniRef50_D2XAL3 Ribonucleoside diphosphate reductase alpha subun... 119 5e-25 UniRef50_B4W8S5 Ribonucleoside-diphosphate reductase n=2 Tax=Cau... 118 7e-25 UniRef50_UPI00019240FD PREDICTED: similar to ribonucleotide-diph... 116 3e-24 UniRef50_B0KCF5 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 115 9e-24 UniRef50_P09853 Ribonucleoside-diphosphate reductase large subun... 114 1e-23 UniRef50_P50643 Ribonucleoside-diphosphate reductase large subun... 113 2e-23 UniRef50_C6IVG4 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 111 8e-23 UniRef50_B8J271 Ribonucleoside-diphosphate reductase n=11 Tax=Ba... 111 8e-23 UniRef50_Q66663 Ribonucleoside-diphosphate reductase n=8 Tax=roo... 111 1e-22 UniRef50_C6D5S5 Ribonucleoside-diphosphate reductase, adenosylco... 110 2e-22 UniRef50_B5YGJ2 Ribonucleoside-diphosphate reductase n=12 Tax=ce... 110 2e-22 UniRef50_Q160T8 Ribonucleoside-diphosphate reductase n=25 Tax=Al... 108 6e-22 UniRef50_B1XZE5 Ribonucleoside-diphosphate reductase n=11 Tax=Be... 108 7e-22 UniRef50_Q77MS1 Ribonucleoside-diphosphate reductase n=9 Tax=Her... 107 2e-21 UniRef50_A5FCJ4 Ribonucleoside-diphosphate reductase, alpha chai... 107 2e-21 UniRef50_Q01037 Ribonucleoside-diphosphate reductase large subun... 106 4e-21 UniRef50_C1D7Z3 Ribonucleoside-diphosphate reductase n=5 Tax=Bet... 105 5e-21 UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=My... 105 5e-21 UniRef50_Q21U31 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 104 1e-20 UniRef50_C3XAC6 Ribonucleoside-diphosphate reductase n=3 Tax=Bet... 104 1e-20 UniRef50_C6P0N4 Ribonucleoside-diphosphate reductase, adenosylco... 104 2e-20 UniRef50_D1CDG6 Ribonucleoside-diphosphate reductase n=1 Tax=The... 102 4e-20 UniRef50_B3SZX1 Putative Ribonucleotide reductase, barrel domain... 102 5e-20 UniRef50_D0J9D2 Ribonucleoside-diphosphate reductase n=2 Tax=Bla... 102 7e-20 UniRef50_A9WCH6 Ribonucleoside-diphosphate reductase n=3 Tax=Chl... 100 2e-19 UniRef50_A8LK99 Ribonucleoside-diphosphate reductase n=25 Tax=Ba... 100 2e-19 UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Met... 97 2e-18 UniRef50_C1A6X4 Ribonucleoside-diphosphate reductase n=1 Tax=Gem... 97 2e-18 UniRef50_Q120H3 Ribonucleotide reductase large subunit n=1 Tax=P... 97 2e-18 UniRef50_A5EVD2 Ribonucleotide reductase, alpha subunit n=30 Tax... 96 4e-18 UniRef50_Q3SMN2 Ribonucleoside-diphosphate reductase n=1 Tax=Thi... 96 5e-18 UniRef50_A7IYE5 Putivate ribonucleotide reductase n=5 Tax=root R... 96 6e-18 UniRef50_Q2LW62 Ribonucleoside-diphosphate reductase n=1 Tax=Syn... 96 6e-18 UniRef50_UPI00004BA6C5 truncated ribonucleoside-diphosphate redu... 95 1e-17 UniRef50_A2DI13 Ribonucleoside-diphosphate reductase n=1 Tax=Tri... 95 1e-17 UniRef50_D1GPW6 Ribonucleoside-diphosphate reductase n=1 Tax=Sta... 95 1e-17 UniRef50_C4NT50 Putative ribonucleoside-diphosphate redutase n=2... 94 3e-17 UniRef50_UPI0001923DF2 PREDICTED: hypothetical protein, partial ... 93 4e-17 UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyr... 92 6e-17 UniRef50_C6QBB0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyp... 92 7e-17 UniRef50_A4IY36 Ribonucleoside-diphosphate reductase n=26 Tax=ro... 92 8e-17 UniRef50_A1TJY2 Ribonucleoside-diphosphate reductase, adenosylco... 92 1e-16 UniRef50_Q8V6N4 Ribonucleotide reductase n=2 Tax=Haloviruses Rep... 92 1e-16 UniRef50_B9KZV2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 90 3e-16 UniRef50_Q196Z5 Ribonucleoside-diphosphate reductase large subun... 90 3e-16 UniRef50_Q67KQ2 Ribonucleoside-diphosphate reductase n=1 Tax=Sym... 90 4e-16 UniRef50_Q2T3W9 Ribonucleotide reductase system n=37 Tax=Burkhol... 89 8e-16 UniRef50_C4RH87 Ribonucleoside-diphosphate reductase n=1 Tax=Mic... 88 1e-15 UniRef50_A3EPA5 Ribonucleoside-diphosphate reductase n=3 Tax=Lep... 88 1e-15 UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=The... 88 2e-15 UniRef50_Q0ILH0 NrdA (Fragment) n=1 Tax=Enterobacteria phage TuI... 87 2e-15 UniRef50_Q11ZE1 Ribonucleotide reductase large subunit n=2 Tax=B... 87 3e-15 UniRef50_B1HS20 Ribonucleoside-diphosphate reductase n=28 Tax=Ba... 87 3e-15 UniRef50_D2EFV5 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 86 4e-15 UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyr... 86 5e-15 UniRef50_Q2RP92 Ribonucleotide reductase large subunit n=1 Tax=R... 86 6e-15 UniRef50_Q3ZZA0 Ribonucleoside-diphosphate reductase n=27 Tax=ce... 86 8e-15 UniRef50_A7HK53 Ribonucleoside-diphosphate reductase n=11 Tax=Th... 85 8e-15 UniRef50_B2A494 Ribonucleoside-diphosphate reductase n=16 Tax=ce... 85 1e-14 UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=The... 84 3e-14 UniRef50_A7I485 Ribonucleoside-diphosphate reductase n=6 Tax=Met... 84 3e-14 UniRef50_O31875 Bsu nrdEB intein n=33 Tax=root RepID=NRDEB_BACSU 83 5e-14 UniRef50_Q5DN91 Ribonucleotide reductase n=1 Tax=Phage phiJL001 ... 82 1e-13 UniRef50_B6IYQ9 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 81 1e-13 UniRef50_B5Y7X0 Ribonucleoside-diphosphate reductase n=1 Tax=Cop... 80 2e-13 UniRef50_A9J500 Putative uncharacterized protein gp07 n=2 Tax=un... 80 4e-13 UniRef50_O41962 Ribonucleoside-diphosphate reductase n=3 Tax=Mur... 79 7e-13 UniRef50_Q6AJC4 Ribonucleoside-diphosphate reductase n=1 Tax=Des... 79 9e-13 UniRef50_C6JQA3 Putative uncharacterized protein n=2 Tax=Fusobac... 79 9e-13 UniRef50_Q5L9C8 Ribonucleoside-diphosphate reductase n=26 Tax=Ba... 78 1e-12 UniRef50_A0MN59 Ribonucleotide reductase alpha subunit n=1 Tax=T... 77 3e-12 UniRef50_Q3AEA3 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 76 5e-12 UniRef50_B6YRR4 Ribonucleoside-diphosphate reductase n=21 Tax=ro... 75 7e-12 UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=... 73 4e-11 UniRef50_Q30CC9 Ribonucleoside diphosphate reductase large subun... 73 5e-11 UniRef50_Q2S5T5 Ribonucleoside-diphosphate reductase, adenosylco... 72 6e-11 UniRef50_B0C346 Ribonucleoside-diphosphate reductase, adenosylco... 72 6e-11 UniRef50_B8G0R6 Ribonucleoside-diphosphate reductase n=5 Tax=Bac... 71 2e-10 UniRef50_C4XRN9 Ribonucleoside-diphosphate reductase n=2 Tax=Des... 71 2e-10 UniRef50_B9LSK3 Ribonucleoside-diphosphate reductase n=9 Tax=roo... 70 2e-10 UniRef50_A4VFR5 Ribonucleoside-diphosphate reductase n=32 Tax=Pr... 70 3e-10 UniRef50_C8WXT6 Ribonucleoside-diphosphate reductase, adenosylco... 69 6e-10 UniRef50_Q91TP4 T45 n=1 Tax=Tupaiid herpesvirus 1 RepID=Q91TP4_T... 68 1e-09 UniRef50_C9RBG7 Ribonucleoside-diphosphate reductase n=1 Tax=Amm... 68 2e-09 UniRef50_UPI000155436D hypothetical protein ORF029 n=1 Tax=Pseud... 67 2e-09 UniRef50_Q19CR5 Ribonucleotide reductase A subunit n=3 Tax=uncla... 67 3e-09 UniRef50_C9L7Y1 Ribonucleoside-diphosphate reductase, adenosylco... 67 4e-09 UniRef50_C6LFM8 Ribonucleoside-diphosphate reductase, adenosylco... 66 5e-09 UniRef50_O26748 Ribonucleoside-diphosphate reductase n=1 Tax=Met... 66 6e-09 UniRef50_B2UNR7 Ribonucleoside-diphosphate reductase, adenosylco... 65 1e-08 UniRef50_B4RFH2 Ribonucleoside-diphosphate reductase alpha chain... 65 1e-08 UniRef50_D2RTR9 Ribonucleoside-diphosphate reductase, adenosylco... 63 4e-08 UniRef50_C9LXZ2 Ribonucleoside-diphosphate reductase, adenosylco... 63 4e-08 UniRef50_Q122S1 Ribonucleoside reductase n=3 Tax=Proteobacteria ... 62 8e-08 UniRef50_Q3KSU5 Ribonucleoside-diphosphate reductase large subun... 62 8e-08 UniRef50_B2KX75 Ribonucleoside-diphosphate reductase n=2 Tax=Spo... 62 9e-08 UniRef50_A4WLF4 Ribonucleoside-diphosphate reductase n=2 Tax=The... 62 1e-07 UniRef50_Q5SM68 Ribonucleoside-diphosphate reductase n=6 Tax=The... 61 1e-07 UniRef50_B7TPW4 GP45 n=1 Tax=Caviid herpesvirus 2 RepID=B7TPW4_9... 61 2e-07 UniRef50_P16782 Ribonucleoside-diphosphate reductase large subun... 60 3e-07 UniRef50_D1JF25 Ribonucleoside-diphosphate reductase n=1 Tax=unc... 60 4e-07 UniRef50_Q1J1T0 Ribonucleoside-diphosphate reductase n=3 Tax=Dei... 58 1e-06 UniRef50_Q39UD5 Ribonucleotide reductase large subunit n=3 Tax=c... 57 3e-06 UniRef50_C1XXN0 Ribonucleoside-diphosphate reductase n=1 Tax=Mei... 56 5e-06 UniRef50_B2UIU6 Ribonucleoside-diphosphate reductase n=3 Tax=Ral... 55 7e-06 UniRef50_O69981 Vitamin B12-dependent ribonucleotide reductase n... 55 7e-06 UniRef50_Q97K72 Ribonucleotide reductase, vitamin B12-dependent ... 55 8e-06 UniRef50_P52343 Ribonucleoside-diphosphate reductase large subun... 55 9e-06 UniRef50_D2LPU1 Ribonucleotide reductase large subunit n=3 Tax=E... 55 1e-05 UniRef50_Q18GD3 Ribonucleoside-diphosphate reductase n=1 Tax=Hal... 54 2e-05 UniRef50_C9M6M1 Ribonucleoside-diphosphate reductase, adenosylco... 54 2e-05 UniRef50_D2R4B9 Ribonucleoside-diphosphate reductase, adenosylco... 54 2e-05 UniRef50_Q9DWE5 PR45 n=1 Tax=Rat cytomegalovirus Maastricht RepI... 54 3e-05 UniRef50_B4D0S2 Ribonucleoside-diphosphate reductase, adenosylco... 53 4e-05 UniRef50_D1ABC6 Ribonucleoside-diphosphate reductase, adenosylco... 52 8e-05 UniRef50_C6BQC0 Ribonucleotide reductase alpha subunit-like prot... 52 1e-04 UniRef50_B3UXH6 Ribonucleotide reductase n=7 Tax=Murid herpesvir... 51 1e-04 UniRef50_Q9RRW1 Ribonucleoside-diphosphate reductase n=1 Tax=Dei... 51 2e-04 UniRef50_P50641 Ribonucleoside-diphosphate reductase large subun... 50 3e-04 UniRef50_Q6MNP6 Vitamin B12-dependent ribonucleotide reductase n... 50 4e-04 UniRef50_Q3JIM4 Ribonucleoside reductase, intein-containing n=47... 50 4e-04 UniRef50_O55567 P25 n=1 Tax=Leucania separata nuclear polyhedros... 49 6e-04 UniRef50_O55716 IIV-6 RIR1 intein n=1 Tax=Invertebrate iridescen... 49 6e-04 UniRef50_A2BL44 Ribonucleoside-diphosphate reductase n=2 Tax=Des... 49 0.001 UniRef50_B1I483 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 49 0.001 UniRef50_C9MSK4 Ribonucleoside-diphosphate reductase n=8 Tax=Pre... 46 0.006 UniRef50_Q0A8L7 Ribonucleoside-diphosphate reductase n=3 Tax=Ect... 45 0.010 UniRef50_C7LZ05 Ribonucleoside-diphosphate reductase, adenosylco... 45 0.010 UniRef50_Q2S696 Ribonucleoside-diphosphate reductase, alpha chai... 45 0.013 UniRef50_Q7UI46 Vitamin B12-dependent ribonucleotide reductase n... 44 0.019 UniRef50_C9LGY8 Anaerobic ribonucleoside-triphosphate reductase ... 44 0.023 UniRef50_C9DFZ9 Ribonucleotide-diphosphate reductase subunit alp... 44 0.033 UniRef50_D1Y8J0 Ribonucleoside-diphosphate reductase, adenosylco... 43 0.049 UniRef50_B9Y435 Putative uncharacterized protein n=1 Tax=Holdema... 42 0.074 >UniRef50_P00452 Ribonucleoside-diphosphate reductase 1 subunit alpha n=228 Tax=root RepID=RIR1_ECOLI Length = 761 Score = 1590 bits (4118), Expect = 0.0, Method: Compositional matrix adjust. Identities = 761/761 (100%), Positives = 761/761 (100%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE 60 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE Sbjct: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE 60 Query: 61 TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL 120 TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL Sbjct: 61 TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL 120 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL Sbjct: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 Query: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT 240 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT Sbjct: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT 240 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG Sbjct: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 Query: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD Sbjct: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 Query: 361 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC 420 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC Sbjct: 361 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC 420 Query: 421 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE 480 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE Sbjct: 421 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE 480 Query: 481 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT Sbjct: 481 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE Sbjct: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE 660 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE Sbjct: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE 660 Query: 661 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT Sbjct: 661 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 Query: 721 AYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 AYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI Sbjct: 721 AYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 >UniRef50_Q8K9W3 Ribonucleoside-diphosphate reductase subunit alpha n=180 Tax=root RepID=RIR1_BUCAP Length = 763 Score = 1224 bits (3168), Expect = 0.0, Method: Compositional matrix adjust. Identities = 560/763 (73%), Positives = 669/763 (87%), Gaps = 2/763 (0%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE 60 M +L VTKR+G E+INLDKIH+VL+WAA+GL N+S+SQVELRS IQFY+ I T +IHE Sbjct: 1 MKNSLFVTKRNGKKEKINLDKIHKVLNWAAKGLENISVSQVELRSRIQFYNNISTVNIHE 60 Query: 61 TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL 120 TIIKAAADLIS + PDYQY+AARLAIFHLRKKAYGQFEPP LY HV KMV++GKYD LL Sbjct: 61 TIIKAAADLISENTPDYQYMAARLAIFHLRKKAYGQFEPPNLYYHVKKMVQLGKYDEKLL 120 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 ++Y+ EE+ +M++F+DH RDM FSYAAVKQLE KYL+QNRVTG+IYESAQFLYIL++ACL Sbjct: 121 QNYSFEEYVEMNSFVDHRRDMNFSYAAVKQLEAKYLLQNRVTGQIYESAQFLYILISACL 180 Query: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT 240 FS Y ++ R+ Y++RFY+A+STFKISLPTPIMSGVRTPTRQFSSCVLIEC D+L+SINAT Sbjct: 181 FSKYEKKVRMNYIQRFYNAISTFKISLPTPIMSGVRTPTRQFSSCVLIECADNLNSINAT 240 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 +SAIVKYVSQRAGIGINAG+IRALGSPIR GEAFHTGCIPFYKHFQ+AVKSCSQGGVRGG Sbjct: 241 TSAIVKYVSQRAGIGINAGQIRALGSPIRNGEAFHTGCIPFYKHFQSAVKSCSQGGVRGG 300 Query: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 AAT+FYP+WHLE+ESLLVLKNNRG+E NRVRH+DY VQINKLMY R+L G+ ITLFSPSD Sbjct: 301 AATVFYPIWHLEIESLLVLKNNRGIEENRVRHLDYAVQINKLMYQRMLLGQKITLFSPSD 360 Query: 361 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC 420 VP LY+ FF+DQ++F+ +Y KYEK+ +IRK+ + A++LF L+M+ERASTGRIYIQ+VDHC Sbjct: 361 VPKLYEFFFSDQKKFKEIYIKYEKNRNIRKKSINAIDLFCLIMRERASTGRIYIQHVDHC 420 Query: 421 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE 480 N+HS F+ +A +RQSNLCLEI LPTKPLN+++D+NGEIALCTLSA NLG IN+L +L+E Sbjct: 421 NSHSAFNSKLATIRQSNLCLEITLPTKPLNNIDDKNGEIALCTLSALNLGLINDLHDLKE 480 Query: 481 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 L+ L+VRALD +L+YQ+YP+ AK+ A+ RR+LGIGVINFAYYLAK+ RYSDGSA NLT Sbjct: 481 LSTLSVRALDEILEYQNYPVVCAKKSAISRRSLGIGVINFAYYLAKNKVRYSDGSAKNLT 540 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 HKTFEAIQYYLLKAS ELAKE+G+C FN+T Y G PIDTYKKD+D+I NEPLH +W Sbjct: 541 HKTFEAIQYYLLKASCELAKEKGSCSLFNQTNYYLGKFPIDTYKKDIDSICNEPLHLNWN 600 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE 660 LR+ IK +GLRNSTLSALMPSETSSQISNATNGIEPPRG++SIK+SKDG+LRQVVP+Y+ Sbjct: 601 LLRKKIKKYGLRNSTLSALMPSETSSQISNATNGIEPPRGFISIKSSKDGMLRQVVPEYK 660 Query: 661 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 L YELLWE+P N GYL+LV IMQKF+DQSISANTNYDP RF + K+PM+QL+ DLL Sbjct: 661 KLKSEYELLWEIPNNIGYLELVAIMQKFVDQSISANTNYDPKRFLNEKIPMKQLIYDLLV 720 Query: 721 AYKFGVKTLYYQNTRDGAEDAQ--DDLVPSIQDDGCESGACKI 761 AYK G+KTLYYQNTRDGAED Q + + +I++D C SG+C I Sbjct: 721 AYKLGIKTLYYQNTRDGAEDNQNLNKSIENIKEDNCTSGSCTI 763 >UniRef50_C8XUI7 NrdA ribonucleoside-diphosphate reductase alpha subunit n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI7_9CAUD Length = 759 Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/748 (48%), Positives = 510/748 (68%), Gaps = 17/748 (2%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAA 66 V KRDGS+ +++K H V+D A +GL VS+S+V S IQF D ++T I + +I+AA Sbjct: 4 VIKRDGSSVPFDIEKPHEVVDRACDGLTGVSMSEVIAASKIQFTDNMRTDRIQDILIQAA 63 Query: 67 ADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEE 126 A LIS D P+YQY+AARL + LRK YGQ++PP L D VK ++ YD L+ YT E Sbjct: 64 ASLISVDKPNYQYVAARLKSYDLRKAVYGQYKPPHLLDIFVKNIKQRVYDREFLDLYTTE 123 Query: 127 EFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGE---IYESAQFLYILVAACLFSN 183 EF +++ I+H RD F++AA+ QL KYL+++R + YE+ Q +Y+ +A LFSN Sbjct: 124 EFNELNDVINHKRDKNFTWAAMGQLTEKYLLRDRSKKDSKIFYETPQVMYMGIAMALFSN 183 Query: 184 YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSA 243 + +++RL+ VK+FY+ ST K SLPTPIM+GVRTPTRQFSSCVLI+ GD+LDSINAT+ Sbjct: 184 WDKDSRLEMVKKFYEYASTGKFSLPTPIMAGVRTPTRQFSSCVLIKTGDTLDSINATAKT 243 Query: 244 IVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAAT 303 IV YVS+RAGIG + G IR +GSPIRGGE HTG IPF K+ A+KSCSQGG+RGGAAT Sbjct: 244 IVDYVSKRAGIGFDVGAIRGIGSPIRGGEMVHTGLIPFIKYLTGALKSCSQGGIRGGAAT 303 Query: 304 LFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPG 363 + P+WH + + ++VLKNNRG E NR R +DYG+QIN++M+ RL+ + + LF P D Sbjct: 304 AYIPLWHYQFDDVVVLKNNRGTEENRERRIDYGIQINRVMFERLVAKQPLYLFDPKDNRE 363 Query: 364 LYDAFFADQEEFERLYTKYEKDDS---IRKQRVKAVELFSLMMQERASTGRIYIQNVDHC 420 +Y+A+FAD ++F LY K +R ++++A E+F +++ +R+ TGRIYI VDH Sbjct: 364 MYEAYFADVDKFRTLYENMIKAADAGLVRSKKLQAEEVFQMLLDQRSDTGRIYIAFVDHM 423 Query: 421 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE 480 N +SPF+ + + SNLCLEIALPT+ NDENG +ALCTL++FNL A + E+E+ Sbjct: 424 NEYSPFN--LDTIYSSNLCLEIALPTREFEQYNDENGRVALCTLASFNLTAFEDPTEMED 481 Query: 481 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 +A + V ALD LL+YQDYP A++ R LG+G++N A++LAK+ Y + + Sbjct: 482 VAFVLVSALDMLLEYQDYPAIQARKAVEDYRPLGVGIVNVAHFLAKNFTGYGSPAGLEML 541 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN----EPLH 596 + +YL+KASN LA + GAC T + G + D LD + N E + Sbjct: 542 DAWMAHLHFYLVKASNRLAMKFGACK--RGTIHGMGQVTADLQPLPLDILPNGKKPEGMA 599 Query: 597 Y--DWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQ 654 Y DW+ L++ +KT+G+RN+TL A+ P+E+SSQ+ NATNGIEPP+G VSIK SKDG +Q Sbjct: 600 YGLDWDDLKDDLKTYGIRNATLLAVAPTESSSQVLNATNGIEPPKGLVSIKGSKDGTYKQ 659 Query: 655 VVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL 714 VVPD E L Y+L W++ + YL+ ++Q+++DQSIS NT YDP ++P GK+P ++ Sbjct: 660 VVPDVETLGPLYDLKWDLDCIE-YLKTAAVIQRWVDQSISTNTWYDPEKYPDGKIPRAKM 718 Query: 715 LKDLLTAYKFGVKTLYYQNTRDGAEDAQ 742 ++D+L+ Y +G KTLYY +D ED + Sbjct: 719 MQDILSFYMWGGKTLYYNTNKDAKEDEE 746 >UniRef50_Q66LW9 Ribonucleoside-diphosphate reductase 1 alpha chain n=4 Tax=Siphoviridae RepID=Q66LW9_BPT5 Length = 811 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 286/763 (37%), Positives = 433/763 (56%), Gaps = 53/763 (6%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLH--NVSISQVELRSHIQFYDGIKTSD-IHETII 63 V KRDG+ E +K++ WA G +VS S + + + G+ SD + + +I Sbjct: 43 VIKRDGTVEDFAPEKLN---GWAEYGCKTVDVSWSAITMAAQKTLPKGVVDSDTLMDALI 99 Query: 64 KAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPAL---YDHVVKMVEMGKYDNHLL 120 KAA LI +D P Y A L + +RK+ Y FEPP+L +DH MV +G +++ + Sbjct: 100 KAAESLI-KDNPAYDVPAKELRLAQMRKRLYDSFEPPSLRFFHDH---MVSVGAWED-MS 154 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 T+E+F+ ++ IDHDRD F+ +KQ KY +N TGEIYE+ QF Y+ +A + Sbjct: 155 AWITDEQFEALNQVIDHDRDRLFTSGGLKQFFDKYSRRNIATGEIYETPQFAYMGMAMAM 214 Query: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT 240 S P T L + Y+A+S KI++PTP + G+R+ R F+SC L++ D+LDSI+ Sbjct: 215 LSQ-PNWTILDAID-LYNAMSLHKINVPTPPLVGLRSSDRGFASCCLVDSTDTLDSIDTA 272 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 + K V+ RAGIG + R++ P+R G H+G +P+Y+H +VK+ +Q RGG Sbjct: 273 EHIVFKMVAARAGIGYHL-ESRSIADPVRNGAFPHSGKLPYYRHIDRSVKANTQQ-TRGG 330 Query: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 +AT+ YP + E+ L+ +K R + N++ MDY + N L+ R LK EDITL S Sbjct: 331 SATVSYPYFDPEIIQLMQVKQQRATDENKIDKMDYSLSFNNLLLKRYLKNEDITLMSYFY 390 Query: 361 VPGLYDAFFADQE-EFERLYTKYEKD-DSIRK-----------QRVKAVELFSLMMQERA 407 P +++AF++D E +FE +Y EK S+ K +V A E+ ++ R Sbjct: 391 APEVHEAFYSDDEAKFEEIYVAAEKRVASLTKIDHEGKTVPTAPKVSAKEILDTWLRIRM 450 Query: 408 STGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND------------- 454 TGR+Y ++ N H F + P+R +NLC+EI PT+P + + + Sbjct: 451 ETGRMYAHHIGESNRHGNF---LDPIRMTNLCVEITQPTRPFHHITELYKTKEQLDQMKP 507 Query: 455 -ENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTL 513 + GE++LC L LG + +L E E+ + ++ +D +++ QDYP P + A RR + Sbjct: 508 EDIGEVSLCNLGGVVLGRMESLAEWEKTCYILLKFVDTIIEIQDYPFPTMEYTAKKRRNV 567 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTY 573 GIG++N A +A G Y A N H+ E + Y+L KAS LAKEQGAC WFN T Sbjct: 568 GIGLMNAAGAMAAEGLAYEGIEARNWIHREAEKLSYFLHKASVRLAKEQGACEWFNRTKP 627 Query: 574 AKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATN 633 +KGIL IDTYKK +D + + L DWE+LR I +G+RNS L+A MP E+SS + TN Sbjct: 628 SKGILVIDTYKKTVDELVSVGLEMDWESLRADILKYGMRNSVLTAQMPGESSSVLLGVTN 687 Query: 634 GIEPPRGYVSIKASKDGILRQVVP---DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFID 690 IEPPR VSIK S + + P D+E L +Y+L +++ + +++ V MQKF Sbjct: 688 SIEPPRKIVSIKGSAVNKVIAIAPGATDWETLM-SYKLAYDVDRIE-WIKWVATMQKFFS 745 Query: 691 QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQN 733 QSIS N YD ++F + +P +++D +TA K+G KT YY N Sbjct: 746 QSISTNMYYDYTKFENEIIPGPVVVRDFMTAVKYGWKTWYYAN 788 >UniRef50_Q76Z42 NrdA-A aerobic NDP reductase large subunit n=1 Tax=Aeromonas phage Aeh1 RepID=Q76Z42_9CAUD Length = 473 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 240/448 (53%), Positives = 307/448 (68%), Gaps = 10/448 (2%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHI--QFYDGIKTSDIHETI 62 +LV K G TE K+ ++L +A G I E+ + I DG+ T +I + Sbjct: 1 MLVRKSSGITENFEPKKLLKILGFATAG---TRIDPNEILNGIMPSITDGMSTKNIQKLA 57 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLED 122 IK AAD IS + DYQY+AARL ++ +RK Y QF+P L H + +V+ G YD L Sbjct: 58 IKFAADRISIEQSDYQYVAARLQMYAIRKDVYNQFDPIHLKRHTLDLVQDGIYDKDLAIK 117 Query: 123 YTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS 182 +T++EF +++ +I HDRD +YA V Q + KYL ++R T +IYE+ Q LY+LVA CL Sbjct: 118 WTDDEFNELNAYIKHDRDFDLAYAGVMQFKEKYLAKDRSTDQIYETPQILYMLVAMCLHQ 177 Query: 183 NYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSS 242 + + R+ VK FYD S K+SLPTPI++GVRTPTRQFSSCV IE GD LDSINAT+S Sbjct: 178 D-EKTDRIAKVKNFYDVTSLGKLSLPTPILAGVRTPTRQFSSCVKIESGDELDSINATAS 236 Query: 243 AIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAA 302 +IV Y+S+RAGIGIN G IRA GS IR GE HTG IPF+K+FQTAVKSCSQGGVRGGAA Sbjct: 237 SIVDYISKRAGIGINGGAIRAEGSRIRSGEVRHTGIIPFWKYFQTAVKSCSQGGVRGGAA 296 Query: 303 TLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVP 362 TL+YPMWHLEVE +LVLKNN+GVE NR+R +DYG+QINKL + RL + ITLFSP Sbjct: 297 TLYYPMWHLEVEKILVLKNNKGVEENRIRQLDYGIQINKLFFERLKNDDYITLFSPDVQN 356 Query: 363 G-LYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCN 421 G LYD F+ D +F+ LY E + RK+R+KA ELF+L QER TGRIY VD+ N Sbjct: 357 GELYDLFYKDPVKFKELYEMLENEPWCRKKRIKASELFNLFAQERTGTGRIYPMFVDNVN 416 Query: 422 THSPFDPAIAPVRQSNLCLEIALPTKPL 449 + +P+ P+R NLC+EIALPT P+ Sbjct: 417 SATPYK---EPIRMGNLCIEIALPTVPM 441 >UniRef50_B3RGP4 Ribonucleoside triphosphate reductase alpha chain n=5 Tax=unclassified Myoviridae RepID=B3RGP4_9CAUD Length = 771 Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust. Identities = 252/745 (33%), Positives = 405/745 (54%), Gaps = 25/745 (3%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAA 66 V K +G + +++++ + +G N + S + L ++ + YDG T ++++ II + Sbjct: 5 VIKSNGCEVAFDPERLNKAAIFGDDG--NGNWSHIALDAYKRLYDGCTTKEVNQAIIDSC 62 Query: 67 ADLISRDAPDYQYLAARLAIFHLRKKAYGQFEP-PALYDHVVKMVEMGKYDNHLLEDYTE 125 +SR ++ +A R+ I + K+A+G F P+L MVE G +++ Y+ Sbjct: 63 ---VSRKDEEHSRMAGRVLIGQIYKEAFGGFTKIPSLPSFYNTMVEKGYWEDM---GYSF 116 Query: 126 EEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP 185 E +D IDH +D+ + YA +KQ KY +++ + ++ES Q +++ +A + N P Sbjct: 117 TELNTLDAVIDHSKDLGYGYAVLKQFRDKYGIKDTLKDTLFESPQMMFMGIAMAVMKNMP 176 Query: 186 RETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIV 245 +E R+ V + Y +S KI+ PTP ++G+RT ++SC +I+ D+ SI Sbjct: 177 KERRINDVVKLYTYLSDLKINAPTPYLNGLRTGKTGYASCCVIKADDTAKSIGVAREVAY 236 Query: 246 KYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLF 305 +AGIG R+ G +RG H G IP+Y+ VK Q RGG+AT+ Sbjct: 237 TMTVNQAGIGYYLSS-RSAGDGVRGNTIKHMGKIPYYRGIDAGVKENRQQS-RGGSATVS 294 Query: 306 YPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLY 365 + +++ L+ L+N V R+ MDY + IN+ R+ K D L S P L+ Sbjct: 295 FLALDPQIDELIRLRNPMTVASKRINTMDYSIGINRSFINRVAKNLDWMLVSYKHAPQLH 354 Query: 366 DAFFA-DQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS 424 + F EEF+ + KDDSI K ++A +L ++ +R GR+++ D N H+ Sbjct: 355 EGIFTMSMEEFDAEVDRIAKDDSIPKTWIRARDLAVELLTQRIEVGRLFVYWTDEMNRHT 414 Query: 425 PFDPAIAPVRQSNLCLEIALPTKPLNDVND------ENGEIALCTLSAFNLGAINNLDEL 478 PF I SNLC EIALPTK +D+ + ++GE+ALC LS+ G + +E Sbjct: 415 PFKDVIY---SSNLCAEIALPTKGYSDMRNIFKHDVDDGEVALCFLSSLVAGRVTP-EEY 470 Query: 479 EELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 E++A V +D +++ YP + RR++G+G+ N A+++A H Y + Sbjct: 471 EDVAYYTVLMIDNVMEIMTYPYENMESTVKKRRSIGVGLTNVAHFIASHKVTYGSPESKQ 530 Query: 539 LTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP-LHY 597 L H E Y L KAS LAKE+G C W ++T Y +G LPIDTY K++D++ +P L Sbjct: 531 LVHDLAELHSYSLHKASLRLAKERGVCEWMHKTKYPEGWLPIDTYNKEVDSVVKDPSLKQ 590 Query: 598 DWEALR-ESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV 656 DWE LR E I+ GLRNS L A MP+E+SS +N TNG+ P R ++ K S G + +V Sbjct: 591 DWEGLRKEIIENGGLRNSVLEAYMPNESSSLATNTTNGVYPVREHIIFKKSPQGQVLFIV 650 Query: 657 PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLK 716 PDY+ L + Y W++ ND + + ++QKF Q+ISA+ D ++ GK+ M++ L Sbjct: 651 PDYDELKEYYTSAWDVDTND-MIDMYAVIQKFTGQAISADLYIDYTKLKDGKISMKEQLG 709 Query: 717 DLLTAYKFGVKTLYYQNTRDGAEDA 741 L+ A KFG+KT YY N+R GA D+ Sbjct: 710 YLIRATKFGMKTWYYLNSRVGAGDS 734 >UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Aquifex aeolicus RepID=RIR1_AQUAE Length = 801 Score = 357 bits (916), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 250/803 (31%), Positives = 400/803 (49%), Gaps = 81/803 (10%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + V KR G E+++++KI + +A EGL NV ++E + IQF DGI T +I + +IK Sbjct: 3 MYVIKRSGRKEKLDINKIRIAIKFACEGL-NVDPLELEADAQIQFRDGITTKEIQQLLIK 61 Query: 65 AAADLISRDAPDYQYLAARLAIF-------HLR----KKAYGQFEP---PALYDHVVKMV 110 AA+ +S + PD+ Y AARL ++ HLR + G+++P Y V + V Sbjct: 62 TAAEKVSAERPDWTYTAARLLLYDLYKDVAHLRGYSLRDDLGKYKPYNRKNFYSFVKEYV 121 Query: 111 EMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQ 170 E G Y +LLE+Y+EE+F ++ +I +RD+ F+Y +K L +YLV++ G + E Q Sbjct: 122 EKGIYGEYLLENYSEEDFNKLANYIKPERDLYFTYTGIKILYDRYLVRDE-EGRVIELPQ 180 Query: 171 FLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC 230 +Y+L+A L E RL++ K+FYD +S K+++ TP + R P Q SSC ++ Sbjct: 181 EMYMLIAMTLAVPEKPEERLKWAKKFYDVLSEHKVTVATPTLMNARRPFTQLSSCFVLTV 240 Query: 231 GDSLDSI--NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTA 288 D L I N + ++ + G+G+ G+IRA G+PIR + +G IP K Sbjct: 241 DDDLFDIFDNVKKAGMISKFA--GGLGVYLGKIRATGAPIRKFKGASSGVIPVVKLINDT 298 Query: 289 VKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLL 348 + Q G+R G+A++ +WH ++ L +K N G E + + V I L RL Sbjct: 299 MTYVDQLGMRKGSASITLDIWHKDILDFLEVKTNVGDERKKAHDIHPAVSIPDLFMKRLK 358 Query: 349 KGEDITLFSP-------------------SDVPGLY-------------------DAFFA 370 ED TL P +PG + + F+ Sbjct: 359 NREDWTLIDPYWARQYITRKIYDGKYKEVKPLPGSHYYVGIKEDGTQDILEPKGLEDFYG 418 Query: 371 DQEEFERLYTKYEKD-DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPA 429 EEFE+ Y + E++ S K++V + EL+ ++ TG YI D N +P + Sbjct: 419 --EEFEKWYLELEENLPSYAKKKVNSFELWKRLLTVAFETGEPYIFFRDEANRKNP-NKH 475 Query: 430 IAPVRQSNLCLEIAL---PTKPLNDVND----------ENGEIALCTLSAFNLGAINNLD 476 V SNLC EI P+K V D E G++ +C L + NLG ++ + Sbjct: 476 TGMVYSSNLCHEIVQTMSPSKHEKPVLDPETGEITYKKEAGDLPVCNLGSVNLGKVHTEE 535 Query: 477 ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 E++E+ L VR LD +++ Y IP A+ R +GIGV N+ Y L K+G ++ Sbjct: 536 EIKEVLPLLVRMLDNVIEMNFYAIPEAEYTNKRYRAIGIGVSNYHYCLVKNGIKWESEEH 595 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 K FE I +Y LK S ELAKE+G F+ + ++KGIL + ++ + + Sbjct: 596 LKFADKLFELIAFYALKGSLELAKERGRYKLFDGSNWSKGILFGRSVEEIEENSRQNGNN 655 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV 656 W L E IK +G+RN+ L ALMP+ ++S I AT I+P + + GIL QV Sbjct: 656 LPWRELAEEIKKYGIRNAYLLALMPTGSTSLILGATPSIDPIFARFYKEENMSGILPQVP 715 Query: 657 PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLK 716 P+ + + Y+ + + ++ ++ + QK+IDQ+ S N DP P L Sbjct: 716 PEVDRFYWHYKTAYTI-DHEWTIRAAAVRQKWIDQAQSLNLFVDPQNIDG---PRLSRLY 771 Query: 717 DLLTAYKFGVKTLYYQNTRDGAE 739 +L A++ G+KT+YY +R + Sbjct: 772 EL--AWELGLKTIYYLRSRSAMD 792 >UniRef50_Q8SCK6 PHIKZ306 n=2 Tax=phiKZ-like viruses RepID=Q8SCK6_9CAUD Length = 779 Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 248/780 (31%), Positives = 390/780 (50%), Gaps = 47/780 (6%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHN-VSISQVELRSHIQFYDGIKTSDIHETIIKA 65 + K DG+ E + KI+ +WAA+ L + V S V + + D + ++ +I+ Sbjct: 22 IIKLDGTEEAYSPAKINGWGEWAAQHLGDKVDWSSVVMDAVQALGDKTSSQELQLQLIE- 80 Query: 66 AADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE-DYT 124 + ++R Y +A RL +LRKK YG P + +M + D +++ DY+ Sbjct: 81 --ECLNRKTWSYYLMAGRLYAIYLRKKFYGLNGIPTVKALQTRM----RKDGIIVKLDYS 134 Query: 125 EEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY 184 +E+ Q++ IDHD D+ + ++ + GKY ++NR TG+ YE+AQF+Y+ +A L Sbjct: 135 SKEYAQIEKIIDHDLDLLCPHFSLHHIRGKYALRNRKTGQEYETAQFVYMRMAMALAEKE 194 Query: 185 PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAI 244 P ETR+ +V+ +Y +S +S PTP + T R F+SC L GD N S A+ Sbjct: 195 PAETRMTHVENYYKLLSNKILSAPTPNYVNLGTKLRGFASCCLFASGD-----NGVSLAM 249 Query: 245 VKYVSQ-----RAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRG 299 Y++ AGIG+N R++G PIR G H G P+ AV++ Q G RG Sbjct: 250 GDYIANIMTQSSAGIGVNL-MTRSIGDPIRNGLIIHQGKKPYIDVIGKAVRANLQNG-RG 307 Query: 300 GAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGED-ITLFSP 358 GA T +Y + E + + L+N R E + R + Y NK + + + I +F+P Sbjct: 308 GAVTCYYSAFDPEADMITQLRNPRSTEDRKNRDLHYAFLSNKFFAKKAAQKDGMIFVFNP 367 Query: 359 SDVPGLYDAFFA-DQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417 P L+DAF++ D ++F +LY KYE D K V A +L M+ E TG IY + Sbjct: 368 FTAPDLHDAFYSGDIDKFIKLYEKYEADPKFEKTYVNARDLLKSMLVEAYETGTIYSAQI 427 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND-------ENGEIALCTLSAFNLG 470 D N H+PF P+ SNLCLEIA PTKP + D GEIA C+L+A + Sbjct: 428 DELNHHTPFKE---PIYSSNLCLEIAEPTKPYYRMEDLYSSEDHGRGEIATCSLAAIAVD 484 Query: 471 AINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530 + + E A A++ +D + +Y P A R + G+G++ A ++A+ G + Sbjct: 485 NVPDKQTYEMAAYYALKMIDYCILNAEYAFPHLALTAKNRMSAGVGIMGLATHMARAGLK 544 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTI 590 YS + H E Y+L+KAS +++KE+G PW ++T + +G P TY K +DTI Sbjct: 545 YSSDAGKAEIHFIAERHMYFLIKASLKISKERGNAPWIHKTKWPEGWTPRKTYNKSVDTI 604 Query: 591 ANEPLH--YDWEALRESIKTH-GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS 647 Y W+ L + IK + G+ +S L+A MP E SS+ +TNG P R + K Sbjct: 605 IEGGFEELYPWDELEKEIKENGGIAHSVLAAYMPGEASSKALGSTNGPYPVRRLILNKTD 664 Query: 648 KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSR--FP 705 + P + YE +++P D + I+QK+ DQ+ISA D R Sbjct: 665 NGARVLWAAPYGDDDSYVYESAYDIPTKD-LIDCYAIIQKWTDQTISA----DLYRRIVG 719 Query: 706 SGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQ----DDGCESGACKI 761 S K+ ++L + K G+KT YY N A L +++ + GC G+C + Sbjct: 720 SEKISSNEMLGNHFYMVKRGMKTRYYVNLETAAGLDIKSLERAVEVTNTEVGCAGGSCTL 779 >UniRef50_C8WWY9 Ribonucleoside-diphosphate reductase n=15 Tax=Firmicutes RepID=C8WWY9_ALIAD Length = 772 Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 227/756 (30%), Positives = 362/756 (47%), Gaps = 44/756 (5%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETI 62 + V KRDG E ++LDKI L E ++ Q DG++TS+I Sbjct: 26 KTFTVEKRDGRIEPLSLDKIFAFLKRGCEAAEGCDPERLAADVWPQLRDGMRTSEIARVA 85 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKA----------YGQFEPPALYDHVVKMVEM 112 I+AA + S P +Q++AARL +F K+A YG F Y +V++ + Sbjct: 86 IQAAVEKTSVAEPGWQFVAARLLLFDAYKQASRNRGYRHLGYGDF-----YQLIVELERI 140 Query: 113 GKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFL 172 G+Y ++ + Y+E+E ++ +I +RD F+Y +KQL +Y ++N G I E Q L Sbjct: 141 GRYGTYIRQHYSEDEIAELAAYIKPERDYLFNYVGLKQLLDRYAIRNLDNG-IMELPQEL 199 Query: 173 YILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGD 232 ++ V+ L + ++ + KRFYD +ST + ++ TP +S R P Q SSC + D Sbjct: 200 FMGVSMHL--AMKEKDKVAWAKRFYDMLSTLQATVATPTLSNARKPFHQLSSCFIDMPED 257 Query: 233 SLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSC 292 L SI AT A + G+GI G+IRA GS IR G +P+ ++F SC Sbjct: 258 DLVSIYATDEAFARVSKFGGGMGIYVGKIRARGSAIRNHPGASGGVVPWIRNFNNTAVSC 317 Query: 293 SQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGED 352 +Q G+R GAA ++ +WH ++ L L+ N G E + + GV I L R+ + Sbjct: 318 NQLGMRAGAAAVYLDVWHKDILDFLQLRTNNGDERMKAHDIFPGVCIPDLFMRRVEERGM 377 Query: 353 ITLFSPSDVPGLYDAFFADQ--EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTG 410 LF P +V + D EEFER Y ++ ++ + + A+E+ +MQ TG Sbjct: 378 WYLFCPYEVRKVMGFSLEDSWGEEFERRYEACVENPNLPRVEIPAIEIMKRIMQSAFETG 437 Query: 411 RIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND-----------ENGEI 459 +I D N +P A V SNLC EI P + + E G+ Sbjct: 438 TPFIFFRDTANRLNPNKHA-GMVYCSNLCTEIIQNMSPSRRIEETEEGGIITMKTEAGDF 496 Query: 460 ALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVIN 519 +C LS+ NLG +LD + E+ +RA+D ++D YP+P A R +G+GV Sbjct: 497 VVCNLSSLNLGRCRDLDSIREIVRRQIRAMDNVIDLNHYPVPQAAVTNRKYRAVGLGVSG 556 Query: 520 FAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILP 579 + YLA+ G + + + FE I ++ ++AS ELA+E+G P F + + G Sbjct: 557 YHQYLAEKGIPWESEAHVKHADELFEWINFFAIEASMELAREKGPYPLFEGSDWQTGRY- 615 Query: 580 IDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPR 639 DL P DW+ LR + HG+RN+ L A+ P+ ++S I+ +T GI+P Sbjct: 616 -----FDLRGYRTRPGGPDWDGLRREVAEHGVRNAYLVAIAPTSSTSLIAGSTAGIDPVY 670 Query: 640 GYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNY 699 ++ K+G++ Q P+ Y ++ Q+ +DQS S N Sbjct: 671 ARFFLEEKKNGVVPQTAPNLNDKTFWYYKEAHTIDQRWSIEACAARQRHVDQSQSFNLYI 730 Query: 700 DPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTR 735 P + +Q L L A+K G+KT+YY ++ Sbjct: 731 TPG------ISARQFLDLYLLAWKRGLKTVYYVRSK 760 >UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Brachyspira RepID=C0QY27_BRAHW Length = 773 Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 232/771 (30%), Positives = 388/771 (50%), Gaps = 65/771 (8%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKA 65 ++ KRDG E N +K+ +V+DWA EG + +Q+ +I+ D +K +++ +I Sbjct: 11 IIIKRDGREEPFNEEKLRKVIDWATEGKEAFT-NQLLEGLNIKINDKMKIEVLYDELINT 69 Query: 66 AADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGK----YDNHLLE 121 A ++IS P Y +A +L + + K+ G + Y H+ ++ G YD +++ Sbjct: 70 AVNMISPLYPMYDTIAEKLYLMKIYKETCG-LKKIGSYPHIKNFLKKGIKYKIYDKDIIQ 128 Query: 122 DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF 181 +T++E ++++ ID +RD+ F+Y + KY + + E Q Y++ A +F Sbjct: 129 LFTDKELDKINSMIDPNRDLLFTYKGLAIFYKKYC--KNIGNKKLELPQITYMV--AAMF 184 Query: 182 SNY--------------PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVL 227 S Y + RL+Y+KR YD +S +++ TP ++ T Q +SC+L Sbjct: 185 SFYDDYYKGENKDKLEISKSERLKYIKRTYDMLSRHEVTFATPRIANSMTIKAQLASCIL 244 Query: 228 IECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQT 287 D S+N T + Y GI +A IRA GS I+ G IPF K + Sbjct: 245 NTPADDTWSLNQTDGNMALYSKFSGGIAYDASYIRASGSTIQTNRGRSDGPIPFIKRVEQ 304 Query: 288 AVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRL 347 + S +QGGVR GA + +P WHL+V L++LK+ G E R R + Y ++I+ + R+ Sbjct: 305 TISSFNQGGVRKGACVVTFPWWHLDVLDLIMLKDAGGTEDTRARKLVYSIRISNIFRERV 364 Query: 348 LKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERA 407 K +TLF P + P L + + E+F Y YE SIRK+++KA +L +++ R Sbjct: 365 NKDGYVTLFDPKETPLLNEEY---GEKFNVAYIYYESKSSIRKKKIKAKDLLFQILKVRQ 421 Query: 408 STGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND------------- 454 TG +Y+ VD+ N + + + SNLC EI +P+ P + + Sbjct: 422 ETGNLYLTFVDNINEQNMVNRFVGA---SNLCQEIVIPSYPSKLIKEKYVINEDGEYEII 478 Query: 455 ---ENGEIALCTLSAFNLGAINNL--DELEELAILAVRALDALLDYQDYPIPAAKRGAMG 509 ++GEI +C L + NL + N ++ + +R D ++D Q YP+ + Sbjct: 479 QRKKSGEIGICNLVSVNLMSWVNFSPEKKKSFCYTLLRGCDNIIDTQFYPVKEGEIANKK 538 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 R +GIGVIN+A LA + +Y+D A T+K F+ + Y++ +ASN LA+E+G FN Sbjct: 539 NRPIGIGVINYANLLASNKIKYTDKEALEFTNKVFDDLYYHIYEASNILARERGPYKTFN 598 Query: 570 ETTYAKGILPIDTYKKDLDTIANEPLHYD---WEALRESIKTHGLRNSTLSALMPSETSS 626 E+ + +G+ P + + N + D W+ L E+IK +G+R S A+ P+ TS Sbjct: 599 ESKWKEGLTPFHISLLNNNKKNNLNVSVDKEKWDKLAENIKNNGVRFSFHGAIAPTATSG 658 Query: 627 QISNATNGIEPPRGYVSIKASKDGI--LRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGI 684 + +AT IEP V + ++GI L +VP+ + + YE W +P ++L + Sbjct: 659 KSVSATESIEP---IVDLFFIEEGIQTLPSLVPNIKKNREYYERCWNIPAK-TIIELAAV 714 Query: 685 MQKFIDQSISANTNY-DPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNT 734 Q++IDQS S N Y P ++L D+ A G+KTLYY T Sbjct: 715 RQRYIDQSQSLNLYYVKPD-------SAKELWDDIQYAMDLGLKTLYYMKT 758 >UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URA6_9AQUI Length = 767 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 237/796 (29%), Positives = 381/796 (47%), Gaps = 74/796 (9%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAA 66 V KR G E+++++KI L++A +GL NV ++E + IQF DGI T +I +I+ A Sbjct: 3 VVKRSGKREQLDINKIRIALEFAFKGL-NVDPLELETDAQIQFRDGITTEEIQAVLIRTA 61 Query: 67 ADLISRDAPDYQYLAARLAIFHLRKKA---------------YGQFEPPALYDHVVKMVE 111 A+ +S + PD+Q+ AARL ++ L KK Y + Y+ + + V Sbjct: 62 AEKVSPETPDWQFAAARLLLYDLYKKVAHIRGYEVRDELSKDYKPYNTEGFYEFINRFVG 121 Query: 112 MGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQF 171 G Y ++LL+ Y+E + + + I +RD+ F+Y +K L +YL ++ G I E Q Sbjct: 122 EGIYGDYLLKHYSESDIRDLAKHIKPERDLYFNYTGIKILTDRYLARDE-DGRIIELPQE 180 Query: 172 LYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG 231 +Y+L++ L R+++ K FYD +S I++ TP + R P Q SSC ++ Sbjct: 181 MYMLISMTLAIPEKEGDRVKWAKEFYDLLSEHLITVATPTLMNARRPFTQLSSCFILTVD 240 Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS 291 D L I + G+GI G++RA G+PIR + +G IP K + Sbjct: 241 DDLYDIFDNVQKAAQISKHAGGLGIYIGKLRATGAPIRKFKGASSGIIPVVKVINDVMTY 300 Query: 292 CSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 Q G+R G+A++ +WH ++ L +K N G E + + + I L R+ E Sbjct: 301 VDQLGMRKGSASITLDIWHKDILDFLEVKTNAGDERKKAHDIHPAISIPDLFMKRVKNRE 360 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIR---------KQRVKAVELFSLM 402 TL P Y D + E L+ + +++ R K+ V A EL+ + Sbjct: 361 KWTLLDP-----YYTKNVRDGKNLEDLWGEAFEEEYERLEKELPEDAKKEVDAFELWKRL 415 Query: 403 MQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIAL---PTKPL-NDVNDENGE 458 + TG Y+ DH N +P A V SNLC EI PTK L +++ E GE Sbjct: 416 LTVAFETGEPYLFFRDHANRINPNKHA-GMVYSSNLCHEIVQNMSPTKHLGKELDPETGE 474 Query: 459 I---------ALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMG 509 I +C L + NLG + + +E++ VR LD +++ Y IP A+ Sbjct: 475 IVHRKKSGDVVVCNLGSVNLGKVYTKETMEQVVPKLVRLLDNVIEMNYYAIPEAEYTNKR 534 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 R +GIGV N+ Y L K+G + K FE + +Y +K S ELAKE+G F Sbjct: 535 YRAIGIGVSNYHYCLVKNGVNWESEDHLKFADKLFELLGFYAIKGSMELAKERGKYRLFE 594 Query: 570 ETTYAKGILPIDTYKKDLDTIANEPLH-YDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 + +++GI ++L+ + E + W+ L E ++ +G+RNS L ALMP+ ++S I Sbjct: 595 GSDWSRGIF-FGRKAEELEENSKENGNDLPWKDLAEDVRENGIRNSYLLALMPTGSTSLI 653 Query: 629 SNATNGIEPPRGYVSIKASKDGILRQVVPD----YEHLHDAYELLWEMPGNDGYLQLVGI 684 AT ++P + + GIL QV P+ + H AY + + ++ + Sbjct: 654 LGATPSVDPIFAKYYKEENMSGILPQVPPEIDRFFWHYKSAYNI-----DQEWVVRAAAV 708 Query: 685 MQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDD 744 QK+IDQ+ S N DP K+ L K A++ G+KT+YY ++ Sbjct: 709 RQKWIDQAQSLNLFIDPE-----KIDGPTLSKIYQLAWELGLKTIYYLRSK--------- 754 Query: 745 LVPSIQD-DGCESGAC 759 SI D + CES A Sbjct: 755 ---SITDIEECESCAV 767 >UniRef50_A5TVY2 Ribonucleoside-diphosphate reductase n=15 Tax=Fusobacterium RepID=A5TVY2_FUSNP Length = 755 Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 227/755 (30%), Positives = 368/755 (48%), Gaps = 53/755 (7%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQ--FYDGIKTSDIHETIIK 64 V RD E +N++KI L A EGL ++ VEL S+I + + I T I ++I Sbjct: 8 VINRDNIVEDLNIEKIREKLLRACEGLE---VNMVELESNIDSIYEENITTQKIQASLIN 64 Query: 65 AAADLISRDAPDYQYLAARL-------AIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDN 117 A + + + D+ Y+A RL ++H R +YG F + KMVE+G YD Sbjct: 65 TAVAMTTFEESDWSYVAGRLLMMEAEREVYHSRGFSYGDFSKT-----IRKMVELGLYDE 119 Query: 118 HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 LL YTEEE Q+ ID +RDM + YA +YL+ + G+ YE Q ++ ++ Sbjct: 120 RLL-SYTEEELNQIAQLIDVNRDMVYDYAGANMFVNRYLI--KYDGKTYELPQETFMAIS 176 Query: 178 ACLFSNYPR-ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDS 236 L N ETR++ VK FY+A+S K+SL TPI++ +R P SSC + D+++S Sbjct: 177 MMLALNEKAGETRVEIVKEFYNALSLRKLSLATPILANLRIPHGNLSSCFITAIDDNIES 236 Query: 237 INATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG 296 I +I + G+G+N RIRA GS + G G +P+ + + +Q G Sbjct: 237 IFYNIDSIARISKNGGGVGVNVSRIRAKGSMVNGYYNASGGVVPWIRIINDTAVAVNQQG 296 Query: 297 VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLF 356 R GA T+ WHL++E+ L L+ G + + + V + L R+ E TL Sbjct: 297 RRAGAVTVALDTWHLDIETFLELQTENGDQRGKAYDIYPQVVCSNLFMKRVKNNETWTLL 356 Query: 357 SPSDVPGLYDAFFAD--QEEFERLYTKYEKDDSIRKQRV-KAVELFSLMMQERASTGRIY 413 P ++ Y + EFE LY K E D +I+ ++V A ELF +M+ + TG Y Sbjct: 357 DPYEIRKKYGIELCELYGYEFENLYEKIENDPNIKLKKVLSAKELFKSIMKTQLETGMPY 416 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKP-LNDVNDEN----------GEIALC 462 I D N + + + NLC+E KP +N V +E GEI C Sbjct: 417 IFFKDRAN-EVNHNSHMGMIGNGNLCMESFSNFKPTINFVEEEEGNTSIRRSEMGEIHTC 475 Query: 463 TLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAY 522 L + NL + + +ELE+ LAVRALD +D P+ + + + RT+G+G + A Sbjct: 476 NLISINLAELTS-EELEKHVALAVRALDNTIDLTVTPLKESNKHNLLYRTIGVGAMGLAD 534 Query: 523 YLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDT 582 YLA+ Y + N ++ FE I Y +KAS LAK++GA F + + +GI Sbjct: 535 YLAREYMIYEESI--NEINELFERIALYSIKASALLAKDRGAYKAFKGSKWDQGIF---- 588 Query: 583 YKKDLDTI-ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGY 641 Y K + N +W ++T+GLRN L+A+ P+ ++S + +T + P Sbjct: 589 YGKKREWYDTNSKFKDEWNEAFYLVETNGLRNGELTAIAPNTSTSLLMGSTASVTPTFSR 648 Query: 642 VSIKASKDGILRQVVPDYEHLHDAYELLWEMPGND--GYLQLVGIMQKFIDQSISANTNY 699 I+ ++ G + + V +HL D E + Y++++ + ++ Q +S + Sbjct: 649 FFIEKNQRGAIPRTV---KHLKDRAWFYPEFKNVNPISYVKIMAKIGSWVTQGVSMEMVF 705 Query: 700 DPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNT 734 D ++ + + + L+TA++ G K++YY T Sbjct: 706 DLNK----DIKAKDIYDTLITAWEEGCKSVYYIRT 736 >UniRef50_D1BPH5 Ribonucleoside-diphosphate reductase n=3 Tax=Veillonella RepID=D1BPH5_VEIPT Length = 760 Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 215/769 (27%), Positives = 376/769 (48%), Gaps = 69/769 (8%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 +++ KRDG E ++++K R++ +A GL + ++E+ + +QF DG+ T +I +T+++ Sbjct: 3 IMIKKRDGHFEPLSVEKTKRMIAFACLGLDSCDPLELEMDAKLQFVDGMTTKEIQKTLVQ 62 Query: 65 AA------------ADLISRDAPDYQYLAARLAIFHL--------RKKAYGQFEPPALYD 104 A + +++ D+Q++AARL +F L R KA+G P L Sbjct: 63 TAIEKVISKKDDGFGNQVNKMNQDWQFVAARLFLFDLYKEAAITRRYKAFGYGNFPNL-- 120 Query: 105 HVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGE 164 V +VE KY + + +YT +E +++ +I RD F+Y +K L +YLV+ E Sbjct: 121 -VNMLVEEKKYADFFVTEYTADELQELGDYIKPKRDYLFNYEGLKLLADRYLVKG-FNKE 178 Query: 165 IYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSS 224 I+E Q ++ +A L + + +++Y K+FYD +S K++ TP ++ TP Q SS Sbjct: 179 IFELPQERFMAIAMHL-ALVEGKNKVKYAKKFYDLMSQLKMTTATPTLANAGTPFHQLSS 237 Query: 225 CVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKH 284 C + D+L SI +S + +GI G++RAL S IRG + G IP+ + Sbjct: 238 CFISGVDDNLWSIYDVNSKFSRVSKHGGALGIYLGKVRALNSDIRGFKNSSGGVIPWIRL 297 Query: 285 FQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMY 344 + + Q G R G AT+ +WH + + L+ N G + + + + + + Sbjct: 298 YNDTAVAVDQLGKRKGGATVTLDIWHKDFYEFVELRTNNGDDRRKAHDIFPAISVPNIFM 357 Query: 345 TRLLKGEDITLFSPSDVPGL----YDAFF--ADQEEFERLYTKYEKDDSIRKQRVKAVEL 398 R+L E+ TLF P ++ + + +F D++EF + Y + E+D ++ V A+++ Sbjct: 358 ERMLARENFTLFDPHEILAVKGYSLENYFDTDDKKEFTKRYIECEQDPNLHGIEVPALDM 417 Query: 399 FSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIA-------LPTKPLND 451 +M+ TG +I D N +P A + SNLC EIA L + +N+ Sbjct: 418 MKKIMRSAVETGTPFIFFRDTVNAANPNKHA-GMIYASNLCHEIAQNVGFTNLAEEIINE 476 Query: 452 -----VNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRG 506 G++ C L++ +LG I + +ELEE L +R LD ++ P+P ++ Sbjct: 477 DGTITTKTNTGDMVTCNLNSISLGRITD-EELEENIALQIRMLDNVISINQAPVPESRMT 535 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 + R +G+G + +YL H ++ + K FE I +Y +KAS ELAKE+GA P Sbjct: 536 SDKYRAIGLGTSGYHHYLVNHDIQWESDEHIEVADKLFENIAFYAIKASMELAKEKGAYP 595 Query: 567 WFNETTYAKG-ILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETS 625 F + + G Y D W+ L + +G+RN L A+ P+ ++ Sbjct: 596 AFKGSEWETGEYFTRRGYTSD-----------RWKQLAADVAKYGIRNGYLMAVAPTGST 644 Query: 626 SQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMP---GNDGYLQLV 682 S I+N T GI+P I+ K + PD L+D L++ ++ Sbjct: 645 SNIANTTAGIDPIFKKFFIEEKKGSFTPKTAPD---LNDKTFWLYKEAHTIDQQWSIKAC 701 Query: 683 GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYY 731 G+ Q+ IDQ+ S N P ++ +++L + AYK G+KT+YY Sbjct: 702 GVRQRHIDQAQSFNLYITP------QMKAKEILDLYVEAYKQGIKTIYY 744 >UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E2 Length = 790 Score = 291 bits (744), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 228/775 (29%), Positives = 361/775 (46%), Gaps = 68/775 (8%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAA 66 VTKR+G+TE + KI + ++WA +G +V +V ++ + YDGIKTSDI + +IK A Sbjct: 3 VTKRNGATEPFSPSKIEKAVNWAVDGT-SVESQEVIDKAILLIYDGIKTSDIQQALIKGA 61 Query: 67 ADLISRDAPDYQYLAARLAIFHLRKK--------AYGQFEPPALYDHVVKMVEMGKYDNH 118 A L+S D ++ARL + L K + G F+ P + D++ K V + D Sbjct: 62 AKLVSATKADASLVSARLLLLDLYKTVCGVNGKVSGGGFQYPHIKDYLEKGVSLKLLDPE 121 Query: 119 LLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQ-NR----------VTGEIYE 167 LL +Y + ++++ I +RD++F Y + L +Y ++ NR ++G I E Sbjct: 122 LL-NY---DLERINAAIKPERDLSFHYLGLDTLADRYFIRANRDIRLEKETGNMSGNIIE 177 Query: 168 SAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVL 227 Q ++ VA + E R +Y+ S + TP + T Q SSC L Sbjct: 178 LPQHFWMRVAMGVALKEKPEIRTSVALAYYELYSKLEYVSSTPTLFNAGTLHPQLSSCYL 237 Query: 228 IECGDSL--DSINATSSAIVKYVSQRA-------GIGINAGRIRALGSPIRGGEAFHTGC 278 + D++ D + ++I + + A GIG + +R I G +G Sbjct: 238 NQVSDTIAADEGDNRFASIFGAIEETALLSKFAGGIGTDWTPVRGENELIFGTNGISSGV 297 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 +P+ K + +QGG R G+ + WH + + LK G + R + Sbjct: 298 VPYIKVQNNTAVAVNQGGKRKGSVAPYLEAWHPDFMAFCELKRESGDDRRRAHDVFPAAW 357 Query: 339 INKLMYTRLLKGED----ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVK 394 + L+ R ED + FSP P L++ + E+F + Y + E Q + Sbjct: 358 VPDLLIER---KEDPNAMWSFFSPKRFPELHELY---GEDFVKRYEELEAAGEYDFQ-LP 410 Query: 395 AVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND 454 A++++ ++ TG +I D CN +P A + SNLC EI L N Sbjct: 411 AIQVWRHLLTNLFETGHPWITYKDECNRRNPQQHA-GVIHHSNLCTEITL--------NT 461 Query: 455 ENGEIALCTLSAFNLGAI----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGR 510 E A+C L + NL + N L+ L E+ LA+R LD+++D YP A Sbjct: 462 SKDETAVCNLGSINLSQVMSAPNPLERLREVIRLAIRNLDSVIDVNYYPSDRASNSNFKH 521 Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNE 570 R +G+GV+ + +L K G + FEAI Y+ ++AS +LA+E+G+ P F Sbjct: 522 RPIGLGVMGYYEWLVKQGVDFESEEHLKQADALFEAISYFAIEASADLAQERGSYPSFEG 581 Query: 571 TTYAKGILPIDTYK--KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 + ++KGILPID K +D ++P +DWEALRE +K G+RNS + A+ P+ T S I Sbjct: 582 SNWSKGILPIDNAKLMEDGKPFFDQPRRFDWEALREKVK-KGMRNSNVMAIAPTATISNI 640 Query: 629 SNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGY--LQLVGIMQ 686 + T EPP K++ G + V P H+ D Y LL E D ++ + Q Sbjct: 641 AGTTQCTEPPFLLEYFKSNLGGTYQVVDPAIAHVGDKYHLLKESYYVDQLYIIKAAAVRQ 700 Query: 687 KFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDA 741 K+IDQS S N F + L TA K G+KT YY + AE + Sbjct: 701 KWIDQSQSTNL------FAKQGTTGRDLDLWYTTAKKLGLKTTYYLRNQSDAEKS 749 >UniRef50_A9KRT3 Ribonucleoside-diphosphate reductase n=2 Tax=Clostridiales RepID=A9KRT3_CLOPH Length = 764 Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 216/771 (28%), Positives = 366/771 (47%), Gaps = 67/771 (8%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETII 63 ++++ KR+ + E + ++K R++ +A EGL ++EL + IQF DG+ T +I + ++ Sbjct: 2 DIMIKKRNQTYEPLCVEKTKRMIAFACEGLEGCDPIELELDARIQFVDGMSTKEIQKMLV 61 Query: 64 KAAADLISRDAPD------------YQYLAARLAIFHLRKKA-----YGQFEPPALYDHV 106 + A + + D +QY+AARL +F L K+A Y F + V Sbjct: 62 QTAIEKVIHTKKDEFGNIMRETHTNWQYVAARLFVFDLYKEAAIERHYKHFGYGDFLNLV 121 Query: 107 VKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIY 166 +VE Y ++L + YT+ E K++ +I +RD F+Y VK L +YLV+ + E++ Sbjct: 122 NSLVEEELYGSYLTDAYTQLEIKELGAYIKPERDYLFNYEGVKLLSDRYLVKG-LKKEVF 180 Query: 167 ESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCV 226 E Q ++++A L + R++Y K+FYD +S+ ++++ TP ++ TP Q SSC Sbjct: 181 ELPQERFMVIAMHLAIPEEKAKRMEYAKKFYDLLSSLQMTVATPTLANAGTPFYQLSSCF 240 Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ 286 + GD+L SI + +GI G+IRAL S IRG + G IP+ + + Sbjct: 241 ISVVGDNLWSIYDVNQKFSSVSKHGGALGIYVGKIRALNSEIRGNKNASGGVIPWVRLYN 300 Query: 287 TAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR 346 + Q G R G AT+ +WH ++ L LK N G + + + + + L R Sbjct: 301 DTAIAVDQLGRRKGGATITLDIWHADLYDFLDLKTNNGDDRRKAHDIFTALSVPNLFMER 360 Query: 347 LLKGEDITLFSPSDVPGLYDAFFAD------QEEFERLYTKYEKDDSIRKQRVKAVELFS 400 L + E+ +LF P V + D + EF + Y E+ + + V A+E+ Sbjct: 361 LERREEWSLFDPYLVNKVMGFSLEDSYDEVAENEFTKRYLACEECKELPRITVPALEVMK 420 Query: 401 LMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIA--LPTKPLND--VNDEN 456 +M+ TG +I D N +P A + SNLC EI + L + + DE+ Sbjct: 421 RIMKSAVETGAPFIFFRDTVNQANPNKHA-GMIYSSNLCQEITQNMSESELREELIQDES 479 Query: 457 -----------GEIALCTLSAFNLGAINNLDELEELAI---LAVRALDALLDYQDYPIPA 502 G++ C L++ +LG I E ++LA+ L +R LD ++ P+ Sbjct: 480 GAKVIITKIKPGDMVTCNLNSISLGRI----EKKDLAVNIPLQIRMLDNVITLNQTPVAE 535 Query: 503 AKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQ 562 A+ + R +G+G + +YL HG + FE I Y +KAS ELAKE+ Sbjct: 536 ARITSDKYRAIGLGTSGYHHYLVNHGIGWETQKHLEEADDLFEEIAYQAIKASMELAKEK 595 Query: 563 GACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPS 622 G F+ + + G Y K D ++ W AL + + HG+RN ++A+ P+ Sbjct: 596 GKYEAFHGSEWETG-----EYFKRRDYTSDR-----WLALSKEVAEHGMRNGYITAVAPT 645 Query: 623 ETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQL- 681 ++S I+N + GI+P I+ K + + PD + + L E D + Sbjct: 646 GSTSNIANTSAGIDPIFKRYFIEEKKGSFIPKTAPDLNTSN--FWLYKEAHTIDQQFSIR 703 Query: 682 -VGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYY 731 GI Q+ IDQS S N P + +L + A++ G+KT+YY Sbjct: 704 ACGIRQRHIDQSQSFNLYITP------EYKAIDILNLYMEAWRKGLKTIYY 748 >UniRef50_P74240 Ribonucleoside-diphosphate reductase subunit alpha n=12 Tax=Cyanobacteria RepID=RIR1_SYNY3 Length = 767 Score = 288 bits (737), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 225/770 (29%), Positives = 364/770 (47%), Gaps = 69/770 (8%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAA 66 V +RDGS+ +N+ KI V+DWA GL SI+ +E + +GI T +I + +I A Sbjct: 33 VIRRDGSSTPLNIGKIRAVVDWACLGLEVNSIA-LEAGLTTRLREGISTREIQDNLISCA 91 Query: 67 ADLISRDAPDYQYLAARLAIFHLRKKA-------YGQFEPPALYDHVVKMVEMGKYDNHL 119 ++ S + PD++Y+A RL ++ L K YGQ+ V V G+YD+ + Sbjct: 92 LEMCSPNEPDWRYVAGRLHVWSLWKDTLVRRGYQYGQY-----LRTVQTKVTNGEYDSRI 146 Query: 120 LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 L Y+E E ++ +I+ D D + YA L +YL+ N + E + L V A Sbjct: 147 LT-YSEGELQEAGCWINSDWDTDYDYAGAVLLTSRYLLPNELPQEALLTCALLLASVEA- 204 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINA 239 + RLQ+ +RFY++++ +ISL TPI++ +R P +SC ++ D+L+SI Sbjct: 205 ------PDRRLQWARRFYESIAARRISLATPILANLRVPGGSLTSCFIVAMEDNLESIFG 258 Query: 240 TSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRG 299 + + G+G+N RIRA GS + G G IP+ K + +QGG R Sbjct: 259 EITNAARISKNGGGVGVNVSRIRATGSWVMGKPNASGGVIPWTKLLNDTAIAVNQGGRRA 318 Query: 300 GAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPS 359 GA T+ +WHL+V L ++ G + + + + + R++ ED TL P Sbjct: 319 GAVTVGLDVWHLDVPEFLEMQAENGDQRRKAYDIFPQLILPDEFMRRVINKEDWTLVDPY 378 Query: 360 DVPGLYDAFFAD--QEEFERLYTKYEK--DDSIR-KQRVKAVELFSLMMQERASTGRIYI 414 +V A+ E+FE Y + E D +I +R+ A ELF +M+ + TG Y+ Sbjct: 379 EVREKMGIELAELWGEQFEGAYREIESNLDTTITLYKRINARELFKQIMRTQVETGMPYL 438 Query: 415 QNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN 474 D N +P + + + +NLC E P D + C L + NL + + Sbjct: 439 SFKDTINKANP-NKHLGYIPGTNLCCESFSNVTPGQDAH-------CCNLVSLNLANL-D 489 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 L ++ ++ +AVR LD ++ P AK RT+G+G + A +LAK Y + Sbjct: 490 LQDIAGVSQIAVRMLDNTIELTAPPFADAKSHNNKYRTIGVGAMGLADWLAKRRLNYDEL 549 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGIL----PIDTYKKDLDTI 590 + N + FE I Y+ ++S ELAKE+GA P F + + KG+L P+ ++ Sbjct: 550 ADIN---RLFEEIGYWCTQSSMELAKERGAYPAFPGSDWQKGLLIGSKPVSWFQ------ 600 Query: 591 ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG 650 AN WE L I+THG+RNS ++A+ P+ +SS + T I P V + D Sbjct: 601 ANAAKPERWEKLSNDIQTHGIRNSHITAIAPNTSSSLVQGCTASILP----VYSRFFYDK 656 Query: 651 ILRQVVPDYEHLHDAYELLWEMPGNDGY-----LQLVGIMQKFIDQSISA----NTN--- 698 + VP W P N ++ V +Q++ D IS N N Sbjct: 657 WAKGTVPIAPPFIG--NCFWFYPENKTMDQRKVVKAVAAIQQWTDTGISMELLFNLNAGI 714 Query: 699 YDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNT--RDGAEDAQDDLV 746 Y P P + + + L+ A++ G K +YY T +D +D+ D V Sbjct: 715 YFPEE-PERSLNAKDIFDTLVMAWEAGCKAIYYIRTVQKDDFKDSSDGCV 763 >UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alpha n=54 Tax=Epsilonproteobacteria RepID=RIR1_HELPJ Length = 788 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 214/805 (26%), Positives = 369/805 (45%), Gaps = 72/805 (8%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + V KR+G E +++ KI + A + L VS S++E+ + +QF D I T +I +T+IK Sbjct: 2 ITVVKRNGRIEPLDITKIQKYTKDATDNLEGVSQSELEVDARLQFRDKITTEEIQQTLIK 61 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYT 124 A D I D P++ ++A+RL ++ L K G Y H+ + E + +L+ + Sbjct: 62 TAVDKIDIDTPNWSFVASRLFLYDLYHKVSG----FTGYRHLKEYFENAEEKGRILKGFK 117 Query: 125 EE-EFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN 183 E+ + + +++ I +RD F+Y +K L +YL+++ I E Q +++ +A L N Sbjct: 118 EKFDLEFLNSQIKPERDFQFNYLGIKTLYDRYLLKDANNHPI-ELPQHMFMSIAMFLAQN 176 Query: 184 YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSA 243 ++ FY+ +S F+ TP ++ RT Q SSC + D+++ I + Sbjct: 177 EQELNKIAL--EFYEVLSKFEAMCATPTLANARTTKHQLSSCYIGSTPDNIEGIFDSYKE 234 Query: 244 IVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAAT 303 + GIG + +R++GS I G + G IPF K + Q G R GA Sbjct: 235 MALLSKYGGGIGWDFSLVRSIGSYIDGHKNASAGTIPFLKIANDVAIAVDQLGTRKGAIA 294 Query: 304 LFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPG 363 ++ +WH++V + L+ N G E R + + + L R+L+ TLF P + Sbjct: 295 VYLEIWHIDVMEFIDLRKNSGDERRRAHDLFPALWVCDLFMKRVLEDAMWTLFDPYECKD 354 Query: 364 LYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTH 423 L + + D FE+ Y +YEKD I K+ + A +L+ ++ G ++ D+ N Sbjct: 355 LTELYGQD---FEKRYLEYEKDPKIIKEYINAKDLWKKILMNYFEAGLPFLAFKDNANRC 411 Query: 424 SPFDPAIAPVRQSNLCLEIALPTKP-----------------------LNDVN------- 453 +P + +R SNLC EI T P D N Sbjct: 412 NP-NAHAGIIRSSNLCTEIFQNTAPNHYYMQIEYTDGAIEFFEEKELVTTDSNITKCANK 470 Query: 454 ------------------DENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDY 495 ++G+ A+C L++ NL IN ++++ + + VR LD ++D Sbjct: 471 LTSTDILKGKKIYIATKVAKDGQTAVCNLASINLSKINTEEDIKRVVPIMVRLLDNVIDL 530 Query: 496 QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKAS 555 YP K + R +G+GV+ A LA+H + E I Y+ + S Sbjct: 531 NFYPNRKVKATNLQNRAIGLGVMGEAQMLAEHQIAWGSKEHLEKIDALMEQISYHAIDTS 590 Query: 556 NELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH---YDWEALRESIKTHGLR 612 LAKE+G F + ++KGI PID + + + L DW+ LRE +K +G+R Sbjct: 591 ANLAKEKGVYKDFENSEWSKGIFPIDKANNEALKLTEKGLFNHACDWQGLREKVKANGMR 650 Query: 613 NSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE-HLHDAYELLWE 671 N L A+ P+ + S + T IEP + + G++ VVP+ + Y ++ Sbjct: 651 NGYLMAIAPTSSISILVGTTQTIEPIYKKKWFEENLSGLIPVVVPNLNVETWNFYTSAYD 710 Query: 672 MPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT-AYKFGVKTLY 730 + D ++ + QK+IDQ S N + SGK L ++ T A+K G+K+ Y Sbjct: 711 IDAKD-LIKAAAVRQKWIDQGQSINV-FLRIENASGKT-----LHEIYTLAWKLGLKSTY 763 Query: 731 YQNTRDGAEDAQDDLVPSIQDDGCE 755 Y + + D + L S++ C+ Sbjct: 764 YLRSESPSIDEKSVLDRSVECFNCQ 788 >UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=cellular organisms RepID=B4E5V9_BURCJ Length = 1003 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 208/676 (30%), Positives = 318/676 (47%), Gaps = 64/676 (9%) Query: 11 DGSTERINLDKIHRVLDWAAEGL-HNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADL 69 +G T ++L+ + ++ A +GL V+ + + YDG+ S ++++ I AA + Sbjct: 163 NGVTRPLDLNALRALIVSACDGLGAAVNPDPIVAETVKNLYDGVPMSQVYDSAILAARTM 222 Query: 70 ISRDAPDYQYLAARLAIFHLRKKAYG----QFEPPALY-----DHVVKMVEMGKYDNHLL 120 I +D P Y + AR+ + +R++ G Q E Y + + V+ G D+ LL Sbjct: 223 IEKD-PAYSQVTARILLHTIRREILGEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLL 281 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 + + K++ +D +RD+ F Y ++ L +Y + V G E Q ++ VA L Sbjct: 282 Q----FDLKRLGEALDANRDLQFGYLGLQTLYDRYFLH--VDGTRIEMPQAFFMRVAMGL 335 Query: 181 FSN-YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINA 239 N RETR FY+ +S+F TP + T Q SSC L D LD I Sbjct: 336 SLNEIDRETR---AIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADDLDGIYE 392 Query: 240 TSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRG 299 G+G + R+RALGS I+G G +PF K + +QGG R Sbjct: 393 ALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRK 452 Query: 300 GAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPS 359 GA + WHL++E L L+ N G + R M+ I L R+++G D TLFSPS Sbjct: 453 GAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPS 512 Query: 360 DVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVK------AVELFSLMMQERASTGRIY 413 P L+D F AD FE+ YT YE D + + +K A +L+ M+ TG + Sbjct: 513 TCPDLHDKFGAD---FEKAYTAYE--DKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPW 567 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGA-- 471 I D CN SP + V SNLC EI L N + EIA+C L + NL A Sbjct: 568 ITFKDPCNVRSP-QQHVGVVHSSNLCTEITL--------NTSDTEIAVCNLGSVNLVAHL 618 Query: 472 --------INNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYY 523 + D+L+ +A+R LD ++D Y +P A+ + R +G+G++ F Sbjct: 619 VKQADGSYALDHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDC 678 Query: 524 LAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTY 583 L Y+ +A ++ EA+ YY AS ELA+E+G + + + +GILP DT Sbjct: 679 LHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTL 738 Query: 584 K---------KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNG 634 K ++DT +E L DW LR I HG+RNS A+ P+ T S I + Sbjct: 739 KLLTEARGGYVEVDT--SESL--DWTTLRSRIAAHGMRNSNCVAIAPTATISNIIGVSAC 794 Query: 635 IEPPRGYVSIKASKDG 650 IEP + +K++ G Sbjct: 795 IEPTFQNLYVKSNLSG 810 >UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alpha n=148 Tax=cellular organisms RepID=RIR1_CHLTR Length = 1047 Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 235/742 (31%), Positives = 340/742 (45%), Gaps = 91/742 (12%) Query: 49 FYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFE-----PPALY 103 FY GIK S++ I AA I ++ PDY ++AA L + + K+A G+ + A Sbjct: 282 FYSGIKESEVVLACIMAARANIEKE-PDYAFVAAELLLDVVYKEALGKSKYAEDLEQAHR 340 Query: 104 DHVVKMVEMGKYDNHLLEDYTEEEFKQMDTF---IDHDRDMTFSYAAVKQLEGKYLVQNR 160 DH + + G D + L + F +D +D RD+ FSY ++ L +Y N Sbjct: 341 DHFKRYIAEG--DTYRLNAELKHLF-DLDALADAMDLSRDLQFSYMGIQNLYDRYF--NH 395 Query: 161 VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIM--SGVRTP 218 G E+ Q ++ VA L N + + + FY+ +STF+ + TP + SG+R Sbjct: 396 HEGCRLETPQIFWMRVAMGLALN--EQDKTSWAITFYNLLSTFRYTPATPTLFNSGMRHS 453 Query: 219 TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 Q SSC L D+L +I + GIG + IRA G+ I+G G Sbjct: 454 --QLSSCYLSTVQDNLVNIYKVIADNAMLSKWAGGIGNDWTAIRATGALIKGTNGRSQGV 511 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 IPF K + +QGG R GA ++ +WHL+ E L L+ N G E R ++ Sbjct: 512 IPFIKVTNDTAVAVNQGGKRKGAVCVYLEVWHLDYEDFLELRKNTGDERRRAHDVNIASW 571 Query: 339 INKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKD---DSIRK-QRVK 394 I L + RL + TLFSP DVPGL+DA+ EEFERLY +YE+ IR ++V+ Sbjct: 572 IPDLFFKRLQQKGTWTLFSPDDVPGLHDAY---GEEFERLYEEYERKVDTGEIRLFKKVE 628 Query: 395 AVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND 454 A +L+ M+ TG ++ D N S D VR SNLC EI L N Sbjct: 629 AEDLWRKMLSMLFETGHPWMTFKDPSNIRSAQDHK-GVVRCSNLCTEILL--------NC 679 Query: 455 ENGEIALCTLSAFNLG---AINNLDE--LEELAILAVRALDALLDYQDYPIPAAKRGAMG 509 E A+C L + NL + LDE L E +AVR LD ++D YP AK Sbjct: 680 SETETAVCNLGSINLVQHIVGDGLDEEKLSETISIAVRMLDNVIDINFYPTKEAKEANFA 739 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 R +G+GV+ F L K Y+ A + E I YY ++AS LAKE+G + Sbjct: 740 HRAIGLGVMGFQDALYKLDISYASQEAVEFADYSSELISYYAIQASCLLAKERGTYSSYK 799 Query: 570 ETTYAKGILPIDT------YKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSE 623 + + +G+LPIDT Y+ + + + DWE +R +K HG+R+ L A+ P+ Sbjct: 800 GSKWDRGLLPIDTIQLLANYRGEANLQMDTSSRKDWEPIRSLVKEHGMRHCQLMAIAPTA 859 Query: 624 TSSQISNATNGIEP-----------------PRGYVSIKASK---------------DGI 651 T S I T IEP P Y+ K K DG Sbjct: 860 TISNIIGVTQSIEPTYKHLFVKSNLSGEFTIPNVYLIEKLKKLGIWDADMLDDLKYFDGS 919 Query: 652 LRQV--VPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKV 709 L ++ +PD HL + +E+ + ++ QK+ID S N P GK Sbjct: 920 LLEIERIPD--HLKHIFLTAFEIEP-EWIIECASRRQKWIDMGQSLNLYLAQ---PDGK- 972 Query: 710 PMQQLLKDLLTAYKFGVKTLYY 731 +L LTA+K G+KT YY Sbjct: 973 ---KLSNMYLTAWKKGLKTTYY 991 >UniRef50_C1FEX6 Ribonucleoside-diphosphate reductase n=4 Tax=Chlorophyta RepID=C1FEX6_9CHLO Length = 841 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 241/814 (29%), Positives = 354/814 (43%), Gaps = 106/814 (13%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVEL--RSHIQFYDGIKTSDIHETI 62 + V KRDG E ++ DKI ++ A GL+ V + + + Y G+ TS++ E Sbjct: 3 MYVVKRDGRQEPVHFDKITARINKLAYGLNQEFCDPVLVAQKVAVGVYKGVTTSELDELA 62 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEP--PALYDHVVKMVEMGKYDNHLL 120 + AA + S+ PDY LAAR+A+ +L K F +Y+HV K GK+ L Sbjct: 63 AETAASMTSKH-PDYAQLAARIAVSNLHKNTLKSFSETMKVMYEHVNK--RNGKWSPLLA 119 Query: 121 EDYTE---EEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 +D E E + D+ I +DRD + Y K LE YL+ RV G+I E Q L + VA Sbjct: 120 DDVYEIIKENADRFDSEIVYDRDFDYDYFGYKTLERSYLL--RVDGKIVERPQHLLMRVA 177 Query: 178 ACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG-DSLDS 236 + + + Y +S ++ +P + TP Q SSC LI DS++ Sbjct: 178 IGIHKDVEKAIDT------YHMLSERWMTHASPTLFNSGTPRPQLSSCFLIAMKEDSIEG 231 Query: 237 INATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG 296 I T GIG++ IRA S IRG G IP + F + QGG Sbjct: 232 IYDTLKECACISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPMLRVFNDTARYVDQGG 291 Query: 297 -VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITL 355 R GA ++ WH ++ L L+ N G E R R + YG+ N L R+ + TL Sbjct: 292 GKRKGAFAIYLEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMKRVEANGEWTL 351 Query: 356 FSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQ 415 F P++ PGL D + EEFE LY KYE + +K VKA +L+ +++ + TG Y+ Sbjct: 352 FCPNEAPGLADCW---GEEFEALYEKYEAEGKGKKT-VKAQQLWFAILESQVETGNPYML 407 Query: 416 NVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL------ 469 D CN S + +R SNLC EI T P E A+C L++ L Sbjct: 408 FKDACNRKSN-QQNLGTIRSSNLCTEIVEYTSP--------EETAVCNLASIALPRFVIE 458 Query: 470 -------------------GAIN---NLDELEELAILAVRALDALLDYQDYPIPAAKRGA 507 GA N + D+L E+ R L+ ++D YP+ A+R Sbjct: 459 NNPQSPTGRTEAKKLRGSIGAANRYFDHDKLAEITRKVTRNLNRIIDVNYYPVETARRSN 518 Query: 508 MGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW 567 M R +G+GV A G + A L + FE I + L SN++AK G Sbjct: 519 MKHRPIGLGVQGLADVFILLGMPFDSPEAKKLNAEIFETIYFAALTESNDIAKRDGTYES 578 Query: 568 FNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQ 627 + + + G+L D + L + H DW LR I HG+RNS L A MP+ ++SQ Sbjct: 579 YPGSPVSNGVLQPDMW--GLTEMPGGDRH-DWTGLRTKISEHGVRNSLLVAPMPTASTSQ 635 Query: 628 ISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYEL-LW------EMPGNDGYLQ 680 I EP + + G V + L D E+ LW E+ N+G +Q Sbjct: 636 ILGNNECFEPYTSNIYARRVLSGEF--TVVNQHLLSDLTEMGLWDPSLKNELIANNGSVQ 693 Query: 681 LVGIMQK-------------------------FIDQSISANTNYDPSRFPSGKVPMQQLL 715 + I FIDQS S N + + SGK+ Sbjct: 694 SLDIPDNLKEIYKTVWEIKQRILVDMAADRGAFIDQSQSFNVHMSDAN--SGKLTSLHFY 751 Query: 716 KDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPS 748 A+K G+KT +YY +R A+ + + P+ Sbjct: 752 -----AWKKGLKTGMYYLRSRAAADAVKFTVDPN 780 >UniRef50_A8P6Y3 Ribonucleoside-diphosphate reductase n=1 Tax=Brugia malayi RepID=A8P6Y3_BRUMA Length = 1061 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 227/790 (28%), Positives = 348/790 (44%), Gaps = 82/790 (10%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHI--QFYDGIKTSDIHET 61 N V KRDG E ++ DKI R + GL + +E+ + Y G+ T ++ Sbjct: 10 NSYVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELDNL 69 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPA--LYD--HVVKMVEMGKYDN 117 + AAD+I++ PDY LA+R+ + +L KK F + LY+ H M Sbjct: 70 AAEIAADMITKH-PDYATLASRITVSNLHKKTEKSFSKLSRRLYNATHPKSGRHMPLISK 128 Query: 118 HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 L D + +D+ I H+RD ++Y +K LE YL+Q + GE+ E Q + + VA Sbjct: 129 ELF-DIIQNNANLLDSAIVHERDYLYTYFGLKTLERSYLLQ--INGELAERPQHMLMRVA 185 Query: 178 ACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDS 236 + ++ Y+ +S + TP + T T Q SSC L+ DS++ Sbjct: 186 LGIHGE-----DIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFEDSIEG 240 Query: 237 INATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG 296 I T GIG+N IRA GS I G G +P + F A + QGG Sbjct: 241 IFETLKKCALISKSAGGIGLNVHCIRASGSAIAGTNGVSNGLVPMLRVFNNAARYVDQGG 300 Query: 297 -VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITL 355 R GA ++ WH ++ L L+ N G E R R + +G+ + L R+ + +L Sbjct: 301 NKRPGAFAVYLEPWHADIFDFLELRKNVGDELERCRDLFFGLWVPDLFMERVRDDKIWSL 360 Query: 356 FSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQ 415 P++ PGL D++ E FE+LYT+YE++ RKQ V A +L+ ++ + TG Y+ Sbjct: 361 MCPAECPGLEDSW---GEAFEKLYTQYEEEGRYRKQ-VPARKLWETIVFTQIETGMPYMV 416 Query: 416 NVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI--- 472 D CN + + ++ SNLC E+ L + EIA+C L++ LG Sbjct: 417 YKDTCNRKTN-QQNLGTIKCSNLCTEVVLYS--------SREEIAVCNLASIALGRFVTS 467 Query: 473 ---NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGK 529 + L E+ + V+ L+ ++D YPIP A+R R +GIGV A Sbjct: 468 EMKYDFKMLHEVTKVVVKNLNKVIDRNYYPIPEAERSNKRHRPIGIGVQGLADAFILMRY 527 Query: 530 RYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDT 589 ++ A +L + FE I Y L+AS +LAKEQG + + +KGIL D + Sbjct: 528 PFTSEKARDLNKRIFETIYYAALEASCDLAKEQGPYESYEGSPISKGILQFDMWG----- 582 Query: 590 IANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD 649 DW LRE I G+RNS L + MP+ +++QI IEP V + Sbjct: 583 -VTPTDQCDWGTLREKIAKFGIRNSVLLSPMPTASTAQILGNNESIEPYTSNVYTRNVLS 641 Query: 650 GILR----QVVPDYEHL----------------------------HDAYELLWEMPGNDG 677 G + ++ D HL D Y +WEM D Sbjct: 642 GSFQIFNMHLMNDLMHLDLWDDDMKLEIIKNKGSIQNIERIPQEIRDLYRTVWEMSQRD- 700 Query: 678 YLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL--LKDLLTAYKF--GVKT-LYYQ 732 + + FIDQS S N +R G + + + TA+ G+KT +YY Sbjct: 701 IIDMAADRGAFIDQSQSLNIFI--ARPNYGNITSMHFYGWQKVCTAFLMYKGLKTGMYYL 758 Query: 733 NTRDGAEDAQ 742 TR + Q Sbjct: 759 RTRPAVDAVQ 768 >UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=cellular organisms RepID=B2SYU1_BURPP Length = 1001 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 201/677 (29%), Positives = 313/677 (46%), Gaps = 49/677 (7%) Query: 11 DGSTERINLDKIHRVLDWAAEGLHN-VSISQVELRSHIQFYDGIKTSDIHETIIKAAADL 69 +G T +++ + +++ A L + VS + + YDG+ S ++++ I AA + Sbjct: 156 NGVTRPLDMAALRGIIELACSNLGDAVSADPIIAETVKNLYDGVPMSQVYDSAILAARTM 215 Query: 70 ISRDAPDYQYLAARLAIFHLR----KKAYGQFEPPALY-DHVVKMVEMGKYDNHLLEDYT 124 I +D P Y + AR+ + +R K+ Q E Y ++ + ++ G L + Sbjct: 216 IEKD-PAYSQVTARILLHTIRREILKEEVTQTEMGERYAEYFPQFIKRGVQAELLDDKLL 274 Query: 125 EEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN- 183 + + K++ +D++RD+ F Y ++ L +Y + + G E Q ++ VA L N Sbjct: 275 QFDLKRLGAALDNNRDLQFGYLGLQTLYDRYFLHH--DGVRIEMPQAFFMRVAMGLSLNE 332 Query: 184 YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSA 243 RE R FY+ +S+F TP + T Q SSC L D LD I Sbjct: 333 IDREAR---AIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVDDDLDGIYEALKE 389 Query: 244 IVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAAT 303 G+G + R+RALGS I+G G +PF K + +QGG R GA Sbjct: 390 NALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVC 449 Query: 304 LFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPG 363 + WHL++E L L+ N G + R M+ I L R+++G D TLFSPS P Sbjct: 450 AYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPD 509 Query: 364 LYDAFFADQEEFERLYTKYEKDDSIRKQRVK------AVELFSLMMQERASTGRIYIQNV 417 L+D F AD FE+ YT YE D + + +K A +L+ M+ TG +I Sbjct: 510 LHDLFGAD---FEKAYTAYE--DKVARGEIKLFKKIPAAQLWRKMLGMLFETGHPWITFK 564 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGA------ 471 D CN SP + V SNLC EI L N + EIA+C L + NL A Sbjct: 565 DPCNVRSP-QQHVGVVHSSNLCTEITL--------NTSDAEIAVCNLGSVNLVAHLKEQA 615 Query: 472 ----INNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKH 527 + + D+L+ +A+R LD ++D Y + A+ + R +G+G++ F L Sbjct: 616 DGTLVLDHDKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLL 675 Query: 528 GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDL 587 Y+ A + EA+ YY AS ELA+E+G + + + +GILP D+ K Sbjct: 676 RTPYASEEAVKFADTSMEAVCYYAYYASTELAQERGRYSSYRGSLWDRGILPQDSVKLLA 735 Query: 588 DTIA-----NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYV 642 D + DW LR I T+G+RNS A+ P+ T S I + IEP + Sbjct: 736 DARGGYVEVDSSESMDWTELRSRIATYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNL 795 Query: 643 SIKASKDGILRQVVPDY 659 +K++ G VV DY Sbjct: 796 YVKSNLSGEF-TVVNDY 811 >UniRef50_D1CID8 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=D1CID8_THET1 Length = 819 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 199/677 (29%), Positives = 311/677 (45%), Gaps = 40/677 (5%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHET 61 Q + V +G ++ D++ R L A GL ++ YD + I Sbjct: 10 TQRVRVVSPEGGLVPLDPDRVRRHLQHACRGLPECDPDELANEVVRSLYDRVTPEQIRSA 69 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYG----QFEPPALYDHVV-KMVEMGKYD 116 +I AA I RD P Y +A+RL + + ++++G + E A Y + + V Sbjct: 70 MILAARARIERD-PAYDKVASRLMLEQIYQESWGWVPSEAELAATYREMFPRYVHACISA 128 Query: 117 NHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV 176 L E+ + ++ + + +RD Y ++ L +YL+ V G E+ Q+ ++ V Sbjct: 129 GRLSEELARFDLARLASALRPERDEKLRYIGLQTLYDRYLLD--VEGRRLEAPQYFWMRV 186 Query: 177 AA--CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSL 234 A L + P Q FYD +S+ + TP + TP Q SSC L D L Sbjct: 187 AMGLALREDDPNARAAQ----FYDLLSSLRFVSATPTLFNSGTPHPQLSSCYLSTVEDDL 242 Query: 235 DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQ 294 + I K G+G + R+RA G+ IRG G IPF K + +Q Sbjct: 243 EHIFKVIGDNAKLSKWAGGLGNDWTRVRATGALIRGTHGKSQGVIPFLKIVNDTAVAVNQ 302 Query: 295 GGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDIT 354 GG R GA + WHL+ E L L+ N G E R M + L R+ +G T Sbjct: 303 GGKRKGAVCCYLEPWHLDFEEFLELRKNTGDERRRTHDMHTASWVPDLFMRRVQEGGTWT 362 Query: 355 LFSPSDVPGLYDAFFADQEEFERLYTKYEK---DDSIRK-QRVKAVELFSLMMQERASTG 410 LFSP++VP L++ + FER Y +YE+ + +R+ +RV A L+ M+ TG Sbjct: 363 LFSPNEVPDLHELY---GRAFERRYVEYERMAEEGKLRQHKRVDAKMLWRKMLSMLWETG 419 Query: 411 RIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG 470 +I D N S D + + SNLC EI LPT E A+C L + NL Sbjct: 420 HPWIAFKDPSNIRSAQD-HVGVIHSSNLCTEILLPTS--------REETAVCNLGSINLV 470 Query: 471 ---AINNLDE--LEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLA 525 + + LDE L E AVR LD ++D YP P A+R + R +G+G++ F L Sbjct: 471 EHLSGDGLDEAKLAETVRTAVRMLDNVIDINFYPTPEARRSNLRHRPIGLGIMGFHDALL 530 Query: 526 KHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTY-- 583 Y+ A + +T E I ++ + AS+ELA E+G P + + +++G+LPIDT Sbjct: 531 ALRIPYASPQAVEFSDQTMELISWHAIMASSELAAERGRYPSYQGSKWSRGLLPIDTIEL 590 Query: 584 ---KKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRG 640 ++ D + DW +RE++ G+RNS + A+ P+ T S I+ + IEP Sbjct: 591 LERERGGDLEMDRTARLDWGPVREAVARWGVRNSQIMAIAPTATISNIAGVSQSIEPHYR 650 Query: 641 YVSIKASKDGILRQVVP 657 + +K++ G V P Sbjct: 651 NLFVKSNLSGDFTIVNP 667 >UniRef50_B9L2K7 Ribonucleoside-diphosphate reductase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K7_THERP Length = 770 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 209/719 (29%), Positives = 322/719 (44%), Gaps = 72/719 (10%) Query: 73 DAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMD 132 D P+ + AA L + + ++A P +H + VE G L + + Sbjct: 35 DRPEAEREAAALLLEKIAREA-DDGTPLPYPEHFRRFVERGIARGALDPRLRTFQLDVLA 93 Query: 133 TFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQY 192 +D RD YAA+ L +YLV++ T ++ E Q L++ VA L P ETR + Sbjct: 94 RALDPARDALLGYAALATLADRYLVRDPETRQLLERPQALFMRVAMGLALVEPPETRTSW 153 Query: 193 VKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRA 252 R+YD +S+ + TP + TP Q +SC L E DSL+SI ++ Sbjct: 154 ALRWYDLMSSLRYLPSTPTLFNAGTPHHQLASCYLAEVEDSLESILGSAYEFGMLAKYAG 213 Query: 253 GIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLE 312 GIG RIRA G+P+RG G IPF + + S SQGG R G ++ WHLE Sbjct: 214 GIGTAVTRIRATGAPVRGINGTSGGLIPFLHLYDALIASISQGGRRRGTMCVYLEPWHLE 273 Query: 313 VESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP---SDVPGLYDAFF 369 VE+ L L+ N G R ++ + I R+ + LF P ++P L A F Sbjct: 274 VEAFLDLRRNAGDPYRRTHQLNTALWIPDEFLRRVETDDLWYLFDPIVAPELPDLVGAAF 333 Query: 370 ADQEEFERLYTKYEKDDSIRK--QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD 427 + E + L + E R+ +R+ A EL+ ++ TG ++ D N S Sbjct: 334 S--ERYRELCRQAEAGMLPRRAWRRLPARELWLAILASLMETGHPWLTFKDAGNLRSQLR 391 Query: 428 PAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG----AINNLDELEELAI 483 I + SNLC EI LPT E+A+C L + NL LD E+LA Sbjct: 392 -GIGVIHSSNLCTEIFLPTS--------RDEVAVCNLGSVNLARHCTPTGELD-WEQLAA 441 Query: 484 ---LAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 LA+RALD ++D YP A R R +G+G++ FA LA+ Y++ +A +L Sbjct: 442 TVRLAMRALDNVIDANLYPSERAARANQLNRPVGLGLMGFAELLARRAVSYAEPAAADLA 501 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTY-----KKDLDTIANEPL 595 + E + Y+ + AS LA+E+GA P F + +A G+LPIDT + L + Sbjct: 502 DQIAEFLSYHAISASCALAEERGAFPNFAFSRWAAGVLPIDTLDELAADRGLPVEVDRTR 561 Query: 596 HYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQV 655 DWE LR+ ++ G+RN + A+ P+ T + ++ T ++P V + + G +V Sbjct: 562 RLDWEPLRQRVR-RGMRNGAVMAVAPTATIALLAGTTPSLDPYYANVFSRQTLSGKFLEV 620 Query: 656 VPDY-EHLHDAYELLWE--MPG-----------------------------NDGYLQLVG 683 P E L LWE +PG + Y+++ Sbjct: 621 NPILVEELRR--RGLWEQLLPGLVAARGDLRAVPGCPPDLVARFPTAYQVPAESYIEVAA 678 Query: 684 IMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQ 742 +QK++D +S N + R P Q+ L A++ G+K+ YY R E Q Sbjct: 679 RVQKWVDMGVSRNLYHAADR-PG------QMSAVYLAAWRKGLKSTYYCFVRPRMEIEQ 730 >UniRef50_P48591 Ribonucleoside-diphosphate reductase large subunit n=94 Tax=root RepID=RIR1_DROME Length = 812 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 216/784 (27%), Positives = 343/784 (43%), Gaps = 81/784 (10%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHI--QFYDGIKTSDIHETI 62 L V KRDG E ++ DKI + L+ + V + + Y G+ T ++ Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEP--PALYDHVVKMVEMG-KYDNHL 119 + AA L + PDY LAAR+A+ +L K+ F LY+HV K + Sbjct: 72 AEIAAGLTC-NHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVSEF 130 Query: 120 LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 + ++ ++++ I +DRD ++Y K LE YL++ G+I E Q + + VA Sbjct: 131 HYNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKR--NGKIAERPQHMLMRVAIG 188 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE-CGDSLDSIN 238 + + Y+ +S + +P + T Q SSC L+ DS++ I Sbjct: 189 IHGE-----DIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIF 243 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-V 297 + GIG+N IRA G+ I G G +P + F + QGG Sbjct: 244 KSVEQCAMISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGK 303 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R GA ++ WH +V L LK N G E NR R + Y + I L R+ D +L Sbjct: 304 RPGAFAIYLEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMC 363 Query: 358 PSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417 P PGL+D + +EFE+LY KYE++ + VKA L+ +++ + TG Y+ Sbjct: 364 PHKCPGLHDVW---GDEFEKLYEKYEQEGRANRT-VKAQSLWFAIIEAQVETGNPYMLFK 419 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----- 472 D CN S + ++ SNLC EI + P EIA+C L++ L Sbjct: 420 DACNRKSN-QQNVGTIKCSNLCTEIVEYSAP--------DEIAVCNLASIALNMFVTPEK 470 Query: 473 -NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRY 531 + +L+E+ + + L+ ++D YP+P A++ + R +GIG+ FA L Y Sbjct: 471 TYDFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPY 530 Query: 532 SDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA 591 A L + FE I Y L+AS ELA+ +G + + +KGIL D + K + Sbjct: 531 ESEEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNL- 589 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP-------------- 637 +DW+ L+ESI+ HG+RNS L A MP+ +++QI EP Sbjct: 590 -----WDWQKLKESIRMHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGE 644 Query: 638 --------PRGYVSIKASKDGILRQVVPDYEHLH----------DAYELLWEMPGNDGYL 679 R + D + Q++ + D Y+ +WE+ + Sbjct: 645 FQVVNHHLLRDLTELDLWDDDMKNQIISSRGSIQNIETIPPKVRDLYKTVWEISVKST-I 703 Query: 680 QLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGA 738 ++ FIDQS S N + + GK L ++K G+KT +YY T+ A Sbjct: 704 KMAADRGAFIDQSQSFNIHVAEPNY--GK-----LTSIHFYSWKAGLKTGMYYLRTKPAA 756 Query: 739 EDAQ 742 Q Sbjct: 757 NAIQ 760 >UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alpha n=48 Tax=Bacteria RepID=RIR1_TREPA Length = 845 Score = 251 bits (642), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 186/706 (26%), Positives = 336/706 (47%), Gaps = 63/706 (8%) Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEP---PALYDHVVKMVEMGKYD 116 + +IKAA +L +++AP ++ +AARL + E + Y+ + + E G Y Sbjct: 153 QLLIKAAVELTAQEAPQWELIAARLLMLDFSLALGTSLEKLNIHSFYEKITYLEEAGLYG 212 Query: 117 NHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV 176 ++ Y+ E ++ T+++ RD F+Y+++ + +Y+++ R + E+ Q +++ + Sbjct: 213 VYIRTHYSRAEIEEAATYLECSRDKLFTYSSLDMILRRYVIRTRAHVPL-ETPQEMFLGI 271 Query: 177 AACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDS 236 A L N ++ R+Q+VKRFY +S ++++ TP +S R P Q SSC + DSLD Sbjct: 272 ALHLAMNETQD-RMQWVKRFYTVLSKLQVTVATPTLSNARKPFHQLSSCFVDTVPDSLDG 330 Query: 237 INATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG 296 I + + G+G+ G++RA+G+PIRG + G + + K + Q G Sbjct: 331 IYRSIDNFSQVSKFGGGMGLYFGKVRAVGAPIRGFQGAAGGILRWIKLANDTAVAVDQLG 390 Query: 297 VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLK--GEDIT 354 VR G+ ++ +WH ++ L L+ N G + + + V L + + G Sbjct: 391 VRQGSVAVYLDVWHKDIPEFLQLRTNNGDDRMKAHDVFPAVCYPDLFWKTVRDNLGASWY 450 Query: 355 LFSPSDVPGL----YDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTG 410 L P ++ + + F+A EE+E+ Y KD I K+ + EL L+++ TG Sbjct: 451 LMCPHEILTVKGYALEDFYA--EEWEKRYWDCVKDARISKRTIPIKELVRLVLKSVVETG 508 Query: 411 RIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN---------------DE 455 + DH N +P + + SNLC EIA +N V+ Sbjct: 509 TPFAFYRDHANRANP-NGHRGIIYCSNLCTEIAQNMSAINLVSVKITEVDGQKVVVQTTR 567 Query: 456 NGEIALCTLSAFNLGAINNLD--ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTL 513 G+ +C L++ L I+ D EL E+ +AVRALD ++D YP+P A+ R + Sbjct: 568 PGDFVVCNLASLVLSNIDLSDDKELREVVRVAVRALDNVIDLTYYPVPYAQVTNAYYRAI 627 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTY 573 G+GV + + LA+ G + + FE I ++AS +A+E+GA F + + Sbjct: 628 GLGVSGYHHVLAQQGIDWESDEHLAFADRIFERINRAAIEASMTIAREKGAYGCFTGSDW 687 Query: 574 AKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATN 633 G Y + ++ DW+ L+ + THG+RN L A+ P+ ++S I+ T Sbjct: 688 CTG-----AYFRKRGYVSE-----DWQRLQREVATHGMRNGYLLAVAPTSSTSIIAGTTA 737 Query: 634 GIEPPRGYVSIKASKDGILRQVVPD--------YEHLHDAYELLWEMPGNDGYLQLVGIM 685 G++P ++ K ++ +V P Y+ H A E W ++ G+ Sbjct: 738 GVDPIMKQYFLEEKKGMLMPRVAPSLSQKTCPLYKSAH-AVEQRWS-------IRAAGLR 789 Query: 686 QKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYY 731 Q+ IDQ+ S N + + ++Q+L + A++ G+K+LYY Sbjct: 790 QRHIDQAQSVNL------YITTDFTLKQVLDLYVYAWEVGMKSLYY 829 >UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Bacteria RepID=C8WK91_EGGLE Length = 845 Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 187/700 (26%), Positives = 329/700 (47%), Gaps = 46/700 (6%) Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEP---PALYDHVVKMVEMGKYDNH 118 ++KAA +L +++AP ++ +AARL + + + V + E G Y ++ Sbjct: 154 LVKAAVELTTQEAPRWEIIAARLLMVQFDRALAERLAARHIETFAQKVAFLTEEGLYGDY 213 Query: 119 LLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 +L+ YT E + FID R+ F+YA ++ L +Y+++ G ES Q +++ +A Sbjct: 214 ILQHYTPAELDEAAGFIDLSRNDLFTYAGLQLLLDRYVIRTH-QGAPLESPQEMFLGIAL 272 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSIN 238 L R+ +V+RFYD +ST K+++ TP +S R P Q SSC + DSLD I Sbjct: 273 HLAMEERASERMGWVRRFYDMLSTLKVTMATPTLSNARKPFHQLSSCFIDTVPDSLDGIY 332 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVR 298 + K G+G+ G++RA GS IRG + G I + + + Q G+R Sbjct: 333 RSIDNFAKVSKYGGGMGLYFGKVRASGSAIRGFDGAAGGVIRWIRLANDTAVAVDQLGMR 392 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRL---LKGEDITL 355 GA ++ WH ++ L L+ N G + + + V + + ++G D L Sbjct: 393 QGAVAVYLDAWHRDLPEFLALRTNNGDDRMKAHDVFPAVCYPDYFWQQARDNIEG-DWYL 451 Query: 356 FSPSDVPGLYDAFFAD--QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIY 413 P ++ + D EE+ R Y + D I+K+ + ++ L+++ TG + Sbjct: 452 MCPHEILTVKGYALEDCYGEEWTRKYLECVADARIKKRAIPIKDVIRLIIKSAVETGTPF 511 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPT-------KPLNDVNDEN--------GE 458 N D N +P + + SNLC EIA + + DV+ E G Sbjct: 512 TFNRDAVNRANP-NKHRGMIYCSNLCTEIAQNMGAIEQLEQRIEDVDGEQVVVTVTKPGA 570 Query: 459 IALCTLSAFNLGAINNLDELEELAIL---AVRALDALLDYQDYPIPAAKRGAMGRRTLGI 515 +C L++ +LG I ++D+ ELA + AVRALD ++D +P+P A+ R +G+ Sbjct: 571 FVVCNLASLSLGHI-DMDDPHELAHVTESAVRALDNVIDLNFFPVPYAEINNRQYRPIGL 629 Query: 516 GVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAK 575 GV + + LAK G R+ + F + Y ++AS +A+E+GA +F + + Sbjct: 630 GVSGYHHLLAKSGIRWESEEHLAFAERVFGDVHYAAVRASCAIAREKGAYGFFEGSGWQT 689 Query: 576 GILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGI 635 G Y +D W L + HGLRN L A+ P+ ++S I+ T G+ Sbjct: 690 G-----EYFRDRGLTDGR-----WAELARDVAEHGLRNGYLLAVAPTSSTSIIAGTTAGL 739 Query: 636 EPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISA 695 +P ++ K+G++ +V P+ Y + ++ G+ Q+ IDQ+ S Sbjct: 740 DPVMNRYFLEEKKNGLMPRVAPELSMDTFWYYKNAHLIDQTWSVRACGVRQRHIDQAQSM 799 Query: 696 NTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTR 735 N + + + +++L L A++ GVKT+YY ++ Sbjct: 800 NL------YITNEYTFRRVLDLYLLAWEEGVKTIYYVRSK 833 >UniRef50_A2PYM5 Ribonucleoside-diphosphate reductase n=4 Tax=Myoviridae RepID=A2PYM5_9CAUD Length = 742 Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 207/751 (27%), Positives = 351/751 (46%), Gaps = 59/751 (7%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAA 66 V DGS + ++ V++WA EGL V ++ R +F I T +I +I+ A Sbjct: 5 VIHTDGSRTPYDANRAIEVINWACEGLE-VDPDKLSRRLSRRFNADITTEEIQNGLIRTA 63 Query: 67 ADLISRDAPDYQYLAARLAIFHLRKKA-------YGQFEPPALYDHVVKMVEMGKYDNHL 119 A+L PD+ ++ RL ++ R+K YG + P +++ + G Y+ L Sbjct: 64 AELADLQYPDWLKVSGRLRMWDWRRKVKARRGYLYGNY--PVAFEY---LRSEGLYEGDL 118 Query: 120 ----LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYIL 175 L+ Y+ ++ + T+ID +RDM F + L +YL++ + E++ + L + Sbjct: 119 IKKFLDTYSADDIAEAGTWIDPERDMRFDISGADLLTARYLLEGELLQEMWLTQALLLSM 178 Query: 176 VAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLD 235 + P R+ + + YD +S KISL TP+MS +R SSC +I+ DS + Sbjct: 179 LE-------PAHERMTFAHKAYDLLSLGKISLATPLMSNLRQADGSLSSCHIIDIDDSRE 231 Query: 236 SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQG 295 SI S + + G+G+ ++RA GS IR + G P+ K + + +Q Sbjct: 232 SIFDNISQLAAMSANGGGVGVRISKVRARGSRIRKKKGASGGVCPWIKIINATIVATNQR 291 Query: 296 GVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITL 355 GVR GA T+ +WH ++ + L+ + G E + R + I+ R++ +D L Sbjct: 292 GVRAGACTVGIDVWHADLLEYMDLRGDAGSEHTKARDILLQFIISDEFMRRVILDKDWYL 351 Query: 356 FSPSDVPGLYDAFFADQ--EEFERLYTKYEKD--------DSIRKQRVKAVELFSLMMQE 405 P+++ ++ AD +EF Y E D ++K KA+ + M+ Sbjct: 352 VCPTEIKNVFGYQLADMYGDEFTNAYHVIEAYINSSAPPLDVVKKVSAKAI--WKKMLML 409 Query: 406 RASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLS 465 TG Y+ D N +P + + NLC+E + L + + + C L Sbjct: 410 LLETGTPYVAFKDRINALNP-NKHEGIIGGVNLCVE----SYSLFNSSYSH----CCMLL 460 Query: 466 AFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLA 525 + L I + DE+ +++ AVR LDA D P P A+ RT+G+GV+ A +LA Sbjct: 461 SLVLPRIAD-DEMADVSRTAVRLLDAACDLTTSPTPEARAHVNRYRTIGVGVMGLADWLA 519 Query: 526 KHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKK 585 RY D NL K FE I +Y +AS ELA+E+GA P F + ++KG++ K+ Sbjct: 520 IRHLRYQD---LNLIEKLFEDICFYTTQASVELAEERGAYPAFPGSEWSKGLILGGRDKE 576 Query: 586 DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIK 645 + + +P W AL E I G+RNS + A P+ ++S + AT P ++I Sbjct: 577 WVRDNSTDPER--WYALMERIIVSGIRNSHILATAPNSSTSLVQGATASFLPVFSRLTID 634 Query: 646 ASKDGILRQVVPDY--EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANT--NYDP 701 + GI +VP Y E H E + P + +QK++D +S N++ Sbjct: 635 KNGAGI-NTIVPLYIKEAFHFYQESRYTHPSV--VVSAAATIQKWVDTGLSTELLFNFNE 691 Query: 702 SRFPSGKVPMQQLLKDL-LTAYKFGVKTLYY 731 + V + L D+ + A++ G+KT+YY Sbjct: 692 HAYGFDYVATAKDLNDVYMQAWREGLKTVYY 722 >UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Bacteria RepID=B0RGP9_CLAMS Length = 834 Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 205/788 (26%), Positives = 358/788 (45%), Gaps = 92/788 (11%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGL-HNVS-ISQVELRSHIQFYDGIKTSDIHET 61 ++ V KRDGS E + ++I+ ++ A +GL N+ ++Q+ I +DGI T + E Sbjct: 2 SITVVKRDGSKEPYDANRINLAIEDATQGLDENIGWVTQIASELEITLFDGITTQQLDEA 61 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALY-----DHVVKMVEMGKYD 116 +I+ A + +D P + +AARL + + K+ G + P +H + ++ G D Sbjct: 62 VIQVALQNV-KDDPAFDTVAARLLLKTIYKRVLGDYSSPEELKRLHAEHFARNIQRG-VD 119 Query: 117 NHLLEDYTEEEF--KQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYI 174 LL+ + F +++ ++ D Y V L +Y ++ R G+ E Q+ ++ Sbjct: 120 EMLLDSRLVQLFDLERLAQALEPAHDELLKYIGVVTLNNRYGIKGR-NGDALEVPQYFWM 178 Query: 175 LVAACLFSNY--PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGD 232 +A L N P ET + FY+ +S + + T Q ++C ++E D Sbjct: 179 RIAMGLTLNEQNPTETAIA----FYEKMSKLEYLAAGSTLVNAGTIYPQLANCFVMEMQD 234 Query: 233 SLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSC 292 ++ I T+ ++ GIG++ ++RA GSPIR TG IPF + +++ Sbjct: 235 DIEHIAKTTRDVMWLTKGTGGIGLSVSKLRAQGSPIRSNNTTSTGPIPFMHTIDSVLRAV 294 Query: 293 SQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGED 352 S+GG + GA + WHL+ L L+ N G R R + V I+ R+ ED Sbjct: 295 SRGGKKFGALCFYMENWHLDFPEFLDLRQNSGDPYRRTRTANTAVWISDEFMKRVQNDED 354 Query: 353 ITLFSP---SDVPGLYDAFFADQEEFERLYTKYEKDDSIRK-QRVKAVELFSLMMQERAS 408 LF P SD+ LY F+++ F Y + IR +R+ A E F ++ + Sbjct: 355 WYLFDPLEVSDLNELYGKAFSERYAF---YVGEAEAGRIRMFKRINAREQFKSILISLQT 411 Query: 409 TGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFN 468 T ++ D N + + + SNLC EI LP DE+ +++C L++ N Sbjct: 412 TSHPWLTWKDTINNRA-LNNNTGTIHLSNLCTEITLP-------QDEDN-VSVCNLASIN 462 Query: 469 LG---AINNLD--ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYY 523 L A +D ++E+ A LAVR LD L+D + A R +G+GV+ F Sbjct: 463 LSQHFADGKVDFAKIEQSARLAVRQLDNLIDITRSSVKEADFSNQQNRAVGLGVMGFTDI 522 Query: 524 LAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTY 583 + K G Y + +L + E + Y + S +LAKE+GA P F + +++G++P+D+ Sbjct: 523 VEKLGFSYESEESYDLIDEIMEHVSYAAIDESADLAKERGAYPNFEGSRWSEGLVPLDSI 582 Query: 584 K-----KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPP 638 + + N DW+ALR +K G+RN+TL A+ P+ + ++ T G++P Sbjct: 583 ALMEADRGVPVKVNRTTRLDWDALRAKVK-GGMRNATLMAIAPTASIGLVAGTTPGLDPQ 641 Query: 639 RGYVSIKASKDG----ILRQVVPDYEHLHDAYELLWEMPGND------------------ 676 + +++ G + R +V D + L +WE + Sbjct: 642 FSQIFSRSTSSGKFLEVNRNLVKDLQELG-----IWETVRENILRSQGDIQNIAAIPDHV 696 Query: 677 -------------GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYK 723 +L++ QK+IDQ+IS N Y +R + ++ ++ Sbjct: 697 KATYRTSFQLSPYAFLEVAARAQKWIDQAISRNM-YLETR------DLGDMMDIYFAGWE 749 Query: 724 FGVKTLYY 731 GVKT YY Sbjct: 750 RGVKTTYY 757 >UniRef50_C9KMB2 Ribonucleoside-diphosphate reductase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB2_9FIRM Length = 755 Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 188/730 (25%), Positives = 332/730 (45%), Gaps = 58/730 (7%) Query: 53 IKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKM--- 109 ++ ++ + +++AA +L S +AP + +AARL ++ + + V K+ Sbjct: 55 LQAAEKLQALVRAAVELASAEAPHWDKIAARLRYLVFARQLSEDEARRGITNFVAKLRYL 114 Query: 110 VEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESA 169 G Y +++LE YTE E F+ +R+ ++YA + L +Y++ G ES Sbjct: 115 TAKGLYGSYILEHYTERELSAAARFMAEERNHLYTYAGLDLLLSRYVIHTH-HGVALESP 173 Query: 170 QFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE 229 Q +Y+ +A L R+ +V+RFYD +S ++++ TP ++ R P Q SSC + Sbjct: 174 QEMYLGIALHLAMLELPAVRMDWVRRFYDMLSLQQVTMATPTLANARKPYHQLSSCFIDT 233 Query: 230 CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAV 289 DSL+ I + + K G+G+ G++RA G+ IRG E G I + + Sbjct: 234 VPDSLEGIYRSLDSFAKVSKWGGGMGLYFGKVRATGAAIRGFEGAAGGVIRWIRLVNDTA 293 Query: 290 KSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLK 349 + Q GVR GA ++ WH ++ L L+ N G + + + V L + L Sbjct: 294 VAVDQLGVRQGACAVYLDAWHKDLPEFLQLRTNNGDDRMKAHDIFPAVCYPDLFWK--LA 351 Query: 350 GEDIT----LFSPSDVPGLYDAFFAD--QEEFERLYTKYEKDDSIRKQRVKAVELFSLMM 403 ED+ L P ++ + D EE+E+ Y + I K+ + E+ L++ Sbjct: 352 KEDLDAPWFLMDPHEIEMVMGYALEDFWGEEWEKRYRACVAEPRIDKRVISVKEIVRLIL 411 Query: 404 QERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDE-------- 455 + TG + D N +P +P + SNLC EIA P+ V+ E Sbjct: 412 KSVVETGTPFAFYRDTVNRLNP-NPQAGMIYCSNLCTEIAQNMSPVEAVSTEIRTKDGDT 470 Query: 456 -------NGEIALCTLSAFNLGAIN--NLDELEELAILAVRALDALLDYQDYPIPAAKRG 506 G+ +C L++ NLG I+ + +EL + AVRALD ++D + P+ AK Sbjct: 471 VVQVTTRPGDFVVCNLASLNLGRIDVTSHEELRTVVRTAVRALDNVIDLNEAPLAYAKLT 530 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 R++G+GV + + LAK+ R+ F I Y ++AS++LA E+G Sbjct: 531 NAKYRSIGLGVSGYHHMLAKNAIRWESEEHLAFVDDVFARINYAAIEASSDLAAEKGTYG 590 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 F + + G Y K ++ W+ L ++ G+RN+ L A+ P+ ++S Sbjct: 591 CFAGSDWQTG-----AYFKKRGYMSEA-----WQKLAAKVRAQGMRNAYLLAVAPTSSTS 640 Query: 627 QISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQ 686 + T G++P ++ K IL ++ PD Y + ++ G+ Q Sbjct: 641 ILVGTTAGVDPIMKRFFLEEKKGAILPRIAPDLSMKTYWYYKSAHTVDQNWSVRAAGVRQ 700 Query: 687 KFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLV 746 + IDQ+ S N + + +Q+L + AY+ GVKT+YY ++ Sbjct: 701 RHIDQAQSVNL------YITNDFTFRQVLALYIRAYEEGVKTIYYVRSK----------- 743 Query: 747 PSIQDDGCES 756 S++ + CES Sbjct: 744 -SLEVEECES 752 >UniRef50_P23921 Ribonucleoside-diphosphate reductase large subunit n=248 Tax=root RepID=RIR1_HUMAN Length = 792 Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 216/784 (27%), Positives = 343/784 (43%), Gaps = 85/784 (10%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHETIIK 64 V KRDG ER+ DKI + GL+ V +Q+ ++ Y G+ T ++ + Sbjct: 3 VIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLAAE 62 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPA--LYDHVVKMVEMGKYDNHLLE- 121 AA L ++ PDY LAAR+A+ +L K+ F LY+++ GK+ + + Sbjct: 63 TAATLTTKH-PDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINP--HNGKHSPMVAKS 119 Query: 122 --DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 D ++++ I +DRD +++Y K LE YL+ ++ G++ E Q + + V+ Sbjct: 120 TLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL--KINGKVAERPQHMLMRVSVG 177 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGD-SLDSIN 238 + + + Y+ +S + +P + T Q SSC L+ D S++ I Sbjct: 178 I-----HKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIY 232 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-V 297 T GIG+ IRA GS I G G +P + + + QGG Sbjct: 233 DTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNK 292 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R GA ++ WHL++ L LK N G E R R + + + I L R+ +D +L Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352 Query: 358 PSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417 P++ PGL + + EEFE+LY YEK +RK VKA +L+ +++ + TG Y+ Sbjct: 353 PNECPGLDEVW---GEEFEKLYASYEKQGRVRKV-VKAQQLWYAIIESQTETGTPYMLYK 408 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGA------ 471 D CN S + ++ SNLC EI T E+A+C L++ L Sbjct: 409 DSCNRKSN-QQNLGTIKCSNLCTEIVEYT--------SKDEVAVCNLASLALNMYVTSEH 459 Query: 472 INNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRY 531 + +L E+ + VR L+ ++D YP+P A R +GIGV A + Sbjct: 460 TYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPF 519 Query: 532 SDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA 591 A L + FE I Y L+AS +LAKEQG + + +KGIL D + + Sbjct: 520 ESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDL- 578 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI 651 +DW+ L+E I +G+RNS L A MP+ +++QI IEP + + G Sbjct: 579 -----WDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGE 633 Query: 652 LRQVVPDY--------------------------------EHLHDAYELLWEMPGNDGYL 679 + V P + L Y+ +WE+ L Sbjct: 634 FQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEI-SQKTVL 692 Query: 680 QLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGA 738 ++ FIDQS S N + + GK+ +K G+KT +YY TR A Sbjct: 693 KMAAERGAFIDQSQSLNIHIAEPNY--GKLTSMHFY-----GWKQGLKTGMYYLRTRPAA 745 Query: 739 EDAQ 742 Q Sbjct: 746 NPIQ 749 >UniRef50_C1VDU7 Ribonucleoside-diphosphate reductase n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VDU7_9EURY Length = 845 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 229/790 (28%), Positives = 342/790 (43%), Gaps = 97/790 (12%) Query: 12 GSTERINLDKIHRVLDWAAEGLHNVSISQVELR----SHIQFYDGIKTSDIHETIIKAAA 67 ST+ + + +L+ A G +V +V R + YDG +++E + Sbjct: 2 ASTQTTQTNDVRTILNQARTGYEDVLTDEVMDRLVTETERNLYDGASIDEVYEALEGVTT 61 Query: 68 DLISRDAPDYQYLAARLAIFHLRKKAYG-QFEPPALYDHVVKMVEM--GKYDNHLLEDYT 124 I RD P Y+Y+AA + ++ G Q A D E + + ED Sbjct: 62 ARIERD-PAYKYVAADIHRRRYFRRVTGEQLSETADDDTATTYRETFAANLERGVDEDLL 120 Query: 125 EEEFKQMDTFIDH-------DRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 +E ID +RD F Y A+ L +Y ++ V G+ E Q ++ VA Sbjct: 121 DERLLDGRFDIDELADALVLERDDKFDYIAMSTLTQRYFIKTEVDGDPLELPQAFWMRVA 180 Query: 178 ACLF--SNYPRETRLQYVKRFYDAVST--FKISLPTPIMSGVRTPTRQFSSCVLIECGDS 233 L + P+ L+ FYD +S F S PT SG P Q SSC L D Sbjct: 181 MGLAIEEDDPQARALE----FYDVLSRLLFTPSTPTLFHSGTTHP--QLSSCYLTTVEDD 234 Query: 234 LDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCS 293 L+ I + + G+G + +RA G+ I TG +PF K + + Sbjct: 235 LEHIFDSYKHHAQLSKWSGGLGNDWTNLRAEGALIESTGVESTGTVPFLKISNDVTAAIN 294 Query: 294 QGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDI 353 + G R GAA + WH++ + L L+ N G E R M+ + L R+ E Sbjct: 295 RSGKRRGAACGYLEAWHMDFPAFLDLRRNTGDERRRTHDMNTAAWVPDLFMERVENDETW 354 Query: 354 TLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQR----VKAVELFSLMMQERAST 409 TLFSP +VP L++ + EEF LY +YE+ + R V A +L+ M+ T Sbjct: 355 TLFSPDEVPELHETY---GEEFAELYREYEEKAEAGELRQYETVDAADLWRTMLTRLFET 411 Query: 410 GRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL 469 G +I D CN SP D + V SNLC EI L T E A+C L + NL Sbjct: 412 GHPWITFKDPCNVRSPQD-HVGTVHSSNLCTEITLNTSA--------EEHAVCNLGSVNL 462 Query: 470 GAINNLDELEELAI-----LAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYL 524 EL+ A+ A R LD ++D YP A+ M R +G+GV+ F L Sbjct: 463 SNHVADSELDREALADTIETATRMLDNVVDLCFYPTDEAEYSNMRHRPVGLGVMGFHDAL 522 Query: 525 AKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYK 584 + G + A ++ E + Y+ + S+ LAKE+GA F + + +GILP DT Sbjct: 523 MQVGTSMASEEAVEAANRWQEFVSYHTILNSSRLAKERGAYETFEGSKWDRGILPHDTVD 582 Query: 585 -------KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637 +++ T +E + DW+ +R+ I HG+RNS A+ P+ T S I+ T IEP Sbjct: 583 RLEAERGREIPTDRSETM--DWDRVRDHIAEHGMRNSNTMAIAPTATISTINGTTPSIEP 640 Query: 638 PRGYVSIKASKDG----ILRQVVPDY--EHLHDAYELLWEMPGNDGYLQLVGIMQ----- 686 + +K++ G I Q+V D E L D E++ ++ DG +Q V + Sbjct: 641 IYSNLYVKSNMSGDFTVINEQLVDDLKAEGLWDD-EMVDQIKFFDGSIQEVSAIPEEMRE 699 Query: 687 ---------------------KFIDQSISANTNYDPSRFPSGKVPMQQLLKDLL-TAYKF 724 ++IDQSIS N FPS LL D+ TA++ Sbjct: 700 LYRSAFEIDPRHQLRLTAHRGQWIDQSISHNV-----FFPSTD---GSLLDDVYKTAWRL 751 Query: 725 GVKTLYYQNT 734 GVKT YY T Sbjct: 752 GVKTTYYLRT 761 >UniRef50_C5LWW8 Ribonucleoside-diphosphate reductase n=4 Tax=Eukaryota RepID=C5LWW8_9ALVE Length = 1504 Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 220/787 (27%), Positives = 340/787 (43%), Gaps = 84/787 (10%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHETI 62 + V KR+G + DKI + + GL+ V ++Q+ + Y G+ T+++ Sbjct: 3 MYVIKRNGQKADVQFDKITKRIRPLTRGLNEDYVDVTQITQKVAEGIYPGVTTTELDSLA 62 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPP--ALYDHVVKMVEMGKYDNHLL 120 + A +S+ PD+ LAAR+A+ +L K + F LY+ + + Sbjct: 63 AETCA-YMSQVHPDFSTLAARIAVSNLHKNTHESFSETITELYNITDSRGRSSPLVSEEV 121 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 + + ++D ID+DRD + Y K LE YL++ E Q + + VA + Sbjct: 122 YNIVKMNADKLDKAIDYDRDFDYDYFGFKTLERSYLLKRPSDKTCIERPQHMIMRVAVGI 181 Query: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG-DSLDSINA 239 + + Y +ST + TP + TP Q SSC L+ DS++ I Sbjct: 182 HGD-----DVDAAIETYALMSTRVFTHATPTLFNSGTPHPQMSSCFLLSIKEDSIEGIYD 236 Query: 240 TSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VR 298 T GIG+ IRA S IRG F G +P + F + QGG R Sbjct: 237 TLKQCAMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFNDTARYVDQGGGKR 296 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 G+ ++ WH +V L LK N G E +R R + Y + I L R++ D TLF P Sbjct: 297 KGSFAVYLEPWHADVFEFLDLKKNHGKEEHRARDLFYALWIPDLFMKRVMANGDWTLFCP 356 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 ++ PGL D + EEFE LY KYEK D I ++ VKA L+ +++ + TG Y+ D Sbjct: 357 NEAPGLQDTY---GEEFEALYEKYEK-DGIGRKTVKAQSLWFKILESQQETGIPYMLYKD 412 Query: 419 HCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------ 472 N S + +R SNLC EI T + E+A+C L++ L Sbjct: 413 SANRKSN-QKNLGTIRCSNLCCEIIEYT--------SSDEVAVCNLASIALNMFVDKKTR 463 Query: 473 -NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRY 531 + D L +A + + L+ ++D YP+P A++ M R +GIGV A Y Sbjct: 464 TYDFDRLHRVAKVVTKNLNKVIDRNYYPVPEARKSNMRHRPIGIGVQGLADAFLLMRYPY 523 Query: 532 SDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA 591 A L + FE I + +AS ELAK G F + ++GIL D + D I Sbjct: 524 ESPEALKLNNDIFETIYHAACEASMELAKRDGPYETFQGSPASEGILQFDMW----DVIP 579 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS---- 647 + +DW +L+E IK +G+RNS L A MP+ +++QI EP + ++ Sbjct: 580 DSG-RWDWASLKEEIKKNGMRNSLLIAPMPTASTAQILGNNEAFEPYTQNIYVRRVLAGE 638 Query: 648 ----------------------KDGILRQ------VVPDYEHLHDAYELLWEMPGNDGYL 679 KD I+R+ V + D Y+ +WE+ L Sbjct: 639 FVQVNRHLVDDLMELGLWNDEIKDKIIRKKGSVQGVEEIPSEIQDLYKTVWEIK-QKKIL 697 Query: 680 QLVGIMQKFIDQSISAN---TNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTR 735 + +IDQS S N TN ++ S +K G+KT YY T+ Sbjct: 698 DMAAGRGPYIDQSQSLNIHMTNCTNAKLSSMH----------FYGWKLGLKTGQYYLRTK 747 Query: 736 DGAEDAQ 742 A+ Q Sbjct: 748 AAADAIQ 754 >UniRef50_A4XD09 Ribonucleoside-diphosphate reductase n=44 Tax=Bacteria RepID=A4XD09_SALTO Length = 909 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 217/780 (27%), Positives = 346/780 (44%), Gaps = 92/780 (11%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLD-WAAEGLHNVSISQVELRSHIQFYDGIKTSDIHET 61 Q + V KR+G TE ++++KI R ++ W A+ L V +V ++ YDG T+++ Sbjct: 115 QVMGVRKRNGDTEPVDVNKIVRAVERWVAD-LDEVDPLRVATKTISGLYDGATTAELDRL 173 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQ----FEPPALYDHVVKMVEMGKYDN 117 I+ AA+LI + P Y LAARL ++ K+ GQ F Y H + ++ + Sbjct: 174 SIQTAAELIGEE-PQYSKLAARLLAAYVDKEVRGQQVASFSQSIRYAHGLGLI------S 226 Query: 118 HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 + +++D +D D+ F Y ++ + +YL+++ + + E+ Q+ ++L Sbjct: 227 DETAAFVSRNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQY-WLLRV 285 Query: 178 ACLFSNYPRETRLQYVKRFYDAVSTFKI--SLPTPIMSGVRTPTRQFSSCVLIECG-DSL 234 AC S P E FY +S+ S PT SG R Q SSC L++ D L Sbjct: 286 ACGLSGTPAE-----AIGFYRLMSSLAYLPSSPTLFNSGTRHT--QMSSCFLVDSPRDEL 338 Query: 235 DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQ 294 DSI + K GIGI R+R G+ IRG G +PF K V + +Q Sbjct: 339 DSIYQRYHQVAKLSKFSGGIGIAWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQ 398 Query: 295 GGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDIT 354 GG R GAA ++ WH ++E L L++N G + R +++ + R+ D + Sbjct: 399 GGRRKGAACVYLEPWHPDIEEFLELRDNTGEDARRTHNLNLANWLPDEFMRRVEADGDWS 458 Query: 355 LFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYI 414 L PS+ P L D + EEF+ Y EK ++R VKA +L+ MM+ A TG ++ Sbjct: 459 LIDPSEAPELPDLY---GEEFDAAYRVAEK-KAVRT--VKARDLYGRMMRTLAQTGNGWM 512 Query: 415 QNVDHCNTHS--PFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI 472 D NT S +P + SNLC EI +VN+ + E A+C L + NLGA Sbjct: 513 TFKDRSNTLSNQTGEPGNT-IHLSNLCTEIL-------EVNN-DAETAVCNLGSVNLGAH 563 Query: 473 NNLD-----ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKH 527 D +L + AV LD ++D YP A R +G+G++ Sbjct: 564 VTADGVDWEKLRDTVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFFTL 623 Query: 528 GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDL 587 + A+ L+ + E I L+ S LA+ G P + +T A+G D + + Sbjct: 624 RLPFDSAEASELSTRVQEEIFLTALETSAGLAERFGPHPAYAQTRAARG----DLHPELW 679 Query: 588 DTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP---------- 637 + ++P W L+ + HGLRNS L A+ P+ T + I+ IEP Sbjct: 680 GAVPSQPQR--WAGLKARVGEHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRET 737 Query: 638 -----------------PRGY--VSIK---ASKDGILRQVVPDYEHLHDAYELLWEMPGN 675 RG SI+ +G ++ + + + + WE+P Sbjct: 738 MSGEFLQVNTYLVGELKARGLWTASIRDQIKRAEGSVQGLAELPAEVRELFRTAWELP-Q 796 Query: 676 DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTR 735 + L +IDQS S N F + + +L L A+K G+KT YY +R Sbjct: 797 RALIDLAAARAPYIDQSQSLNL------FLAAPT-IGKLSSMYLYAWKSGLKTTYYLRSR 849 >UniRef50_Q2P8D3 Ribonucleoside-diphosphate reductase n=66 Tax=root RepID=Q2P8D3_XANOM Length = 832 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 198/740 (26%), Positives = 333/740 (45%), Gaps = 75/740 (10%) Query: 47 IQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQ--FEPPALYD 104 ++ D + D+ + +I+ A + P++++ AARL + L K+A ++ Y Sbjct: 107 VERKDSVNADDLVDHLIREAEARVDLTTPEWEHFAARLYLRRLYKRASRNRFYDASQKYG 166 Query: 105 HVVKMVE----MGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR 160 V + E Y N +L Y+++E + I+ +RD F+Y + L +YL + Sbjct: 167 SFVGLQESLADRNVYSNDILRRYSKDELIEAGKMIEPERDKLFAYNGLYLLATRYLATDS 226 Query: 161 VTGEIYESAQFLYILVAACLFSNY------PRETRLQYVKRFYDAVSTFKISLPTPIMSG 214 G ++E Q ++ +A L + RE R+Q V Y A+S +++ TP ++ Sbjct: 227 SRG-VFELPQERWLTIALYLMQDEIGTGKGSRERRMQLVGEAYWALSNLYMTVATPTLAN 285 Query: 215 VRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAF 274 Q SSC + DSL I +++ + + G+G G +R+ GS IRG Sbjct: 286 AGKVGGQLSSCFIDTVDDSLQGIYDSNTDVARVSKHGGGVGAYLGYVRSSGSAIRGVSNS 345 Query: 275 HTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMD 334 G +P+ K S Q G R GA ++ ++H ++E+ L L+ N G + R + Sbjct: 346 SGGVVPWIKQLNNTAVSVDQLGQRKGAIAVYLDIFHRDIEAFLDLRLNNGDQRLRAHDVF 405 Query: 335 YGVQINKLMYTRLLKGEDITLFSPSD---VPGLYDAFFADQEE------FERLYTKYEKD 385 V I L + + D LF P + V G Y F D+++ F R Y + D Sbjct: 406 TSVCIPDLFMEAVERRGDWYLFDPHEVKRVKGWYLQDFYDEKKGDANSSFRRKYEEVVAD 465 Query: 386 DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEI--- 442 + I ++ VKA+E+F +M + TG ++ D N +P + V SNLC EI Sbjct: 466 ERITRKTVKAIEIFKRIMVSQLETGNPFMFYRDEVNRKNP-NKHEGMVYSSNLCTEILQN 524 Query: 443 ALPTKPLNDVNDEN--------GEIALCTLSAFNLG-AIN---------NLDELEELAIL 484 PT+ + ++ N G+ +C LS+ NLG AI D LE L + Sbjct: 525 MSPTRMMQEIISGNQIVTTKKAGDFVVCNLSSINLGRAITVQADQADLLGADVLERLIPI 584 Query: 485 AVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTF 544 VR LD ++D P+P A R +G+G + + LA+ ++ A + + + + Sbjct: 585 QVRMLDNVIDLNQLPVPQATITNQKYRAIGLGTFGWHHLLAQKAIHWNAKEAEDYSDELY 644 Query: 545 EAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRE 604 E I Y ++AS ELAKE+G F + + G Y + D N P W L Sbjct: 645 ERINYLTIQASMELAKEKGTYSVFRGSDWHNG-----EYFRARDY--NSP---QWLELSA 694 Query: 605 SIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD--------GILRQVV 656 + +G+RN+ + A+ P+ +++QI+ +T I+P + KD G+ Sbjct: 695 QVAVNGVRNAWMLAVAPNMSTAQIAGSTASIDPIYSAFYYEEKKDFRRPVAAPGLSLDTW 754 Query: 657 PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLK 716 P YE AY++ ++ Q+ +DQSIS N Y PS + LL Sbjct: 755 PYYE--KGAYKV-----DQFASVRQNARRQRHVDQSISFNF-YVPS-----TIRASTLLD 801 Query: 717 DLLTAYKFGVKTLYYQNTRD 736 +TA++ G+KT YY + D Sbjct: 802 LHMTAWREGLKTTYYVRSND 821 >UniRef50_C5DEU8 Ribonucleoside-diphosphate reductase n=2 Tax=Saccharomycetales RepID=C5DEU8_LACTC Length = 867 Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 215/802 (26%), Positives = 337/802 (42%), Gaps = 100/802 (12%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLH--NVSISQVELRSHIQFYDGIKTSDI 58 M +V+ R+G ++ + + L A GL + V R D + S Sbjct: 1 MTVKTVVSDRNGEANKLTSQALAQSLKQLAGGLQIEDADFDAVSRR----ILDAVPPSAT 56 Query: 59 HETIIKAAADLI---SRDAPDYQYLAARLAIFHLRKKAYG---------------QFEPP 100 H ++++ +++ S PD+ LAAR I L KK G + P Sbjct: 57 HSSVVQFGGEVLAAMSTTHPDFANLAARWEISELHKKLQGLSFTENLALLQKLRSSSKAP 116 Query: 101 ALYDHVVKMVEMGKYDNHLLEDYTEEEFK---QMDTFIDHDRDMTFSYAAVKQLEGKYLV 157 + H K N + + E + +D I DRD FSY K L YL+ Sbjct: 117 TVKRHKTSTSHNDK--NLISAAFYEMALRYQTTLDAAIQPDRDFDFSYFGWKTLSKSYLI 174 Query: 158 QNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRT 217 + R E +E+ QFL++ VA + PR + V YD +S +P + T Sbjct: 175 K-RKNEETHETPQFLFMRVALAIHG--PR-GDIDAVLETYDLMSRKFFIHASPTLFNAGT 230 Query: 218 PTRQFSSCVLIE-CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHT 276 + SSC L+ DS+D I T G+G++ +R G+ I G Sbjct: 231 VNQYLSSCFLVAMIEDSIDGIYRTLHKTAMISKASGGVGVHVSNVRGTGAYISGSNGTSN 290 Query: 277 GCIPFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDY 335 G +P + F + QGG R GA ++ WH +V L L+ N+G E R R + Sbjct: 291 GLVPMLRVFNNTARYVDQGGNKRPGAFCIYLEPWHSDVLDFLQLRKNQGKEELRARDLFL 350 Query: 336 GVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKA 395 + I L R+ + LFSP + PGL + F EEF++LY YEK + K ++ A Sbjct: 351 ALWIPDLFMERVEQNGSWCLFSPDEAPGLQECF---GEEFKKLYETYEKTLAPAK-KMPA 406 Query: 396 VELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDE 455 +L+S ++Q + TG ++ D CN S + ++ SNLC EI + P Sbjct: 407 QKLWSEILQSQVETGGPFMLYKDSCNNKSN-QKNLGTIKSSNLCCEIVQYSSP------- 458 Query: 456 NGEIALCTLSAFNL---------GAINNLDELEELAILAVRALDALLDYQDYPIPAAKRG 506 E A+C L++ L AI + + L ++ + + LD+++D DYP+ AK Sbjct: 459 -SETAVCNLASVALPSFVKLQREQAIFDFESLHKIVKVLTKNLDSVIDICDYPVEDAKFS 517 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 R + IGV A L + SA L + FE I + ++ S E +K+ G P Sbjct: 518 NEKNRPIAIGVQGLADALMILRIPFHSESARVLNKQIFETIYHAAVETSIERSKKLGPYP 577 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 F+ + ++G D + + D E L DW+ +RE +K HG+RNS L MP+ ++S Sbjct: 578 SFDNSPVSRGEFQFDLWGLNDDNY--EFLFSDWKEMREKVKQHGIRNSLLVGPMPTASTS 635 Query: 627 QISNATNGIEPPRGYVSIKASKDG----ILRQVVPDY----------------------- 659 QI T EP + + G I + +V D+ Sbjct: 636 QILGFTESFEPMTSNIYTRRVLSGEFTVINKYMVDDFCRLGIWNEKLKNRIIEQNGSIQG 695 Query: 660 -----EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL 714 +L + Y +WE+P + L FIDQS S N R P+ M +L Sbjct: 696 IEGIPSNLKELYRTVWEIP-QRVMIDLSADRGPFIDQSQSLNLFL---REPT----MGKL 747 Query: 715 LKDLLTAYKFGVKT-LYYQNTR 735 +K G+KT +YY T+ Sbjct: 748 TSMHFYGWKKGLKTGMYYLRTQ 769 >UniRef50_C7NVI1 Ribonucleoside-diphosphate reductase n=2 Tax=Halobacteriaceae RepID=C7NVI1_HALUD Length = 815 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 214/781 (27%), Positives = 340/781 (43%), Gaps = 101/781 (12%) Query: 20 DKIHRVLDWAAEGLHNVSIS-QVELRSHI--QFYDGIKTSDIHETIIKAAADLISRDAPD 76 D+I +LD A +G V+ S + LR I Y G ++++E I+ + I P Sbjct: 10 DRIASILDRATDGEPTVTESDRTALRRAIDENCYAGADRAEVYEAILGTLSARIEA-KPA 68 Query: 77 YQYLAARLAIFHLRKKAYGQFEPPALY-------------DHVVKMVEMGKYDNHLLEDY 123 Y+ +AAR+ R++ Y + L +++ + V D L++ + Sbjct: 69 YKRVAARV----FRQRYYHEVIGEDLTGTELDRAYRTIFRENIERGVATDLLDTRLVDRF 124 Query: 124 TEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN 183 + + ++ +RD F Y A++ L +Y ++ GE E Q ++ VA L Sbjct: 125 ---DLDALAEYLAPERDEHFEYLAMETLYQRYFLRTN-DGEHLELPQAFWMRVAMGL--A 178 Query: 184 YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSA 243 + K FYD +S + + TP + T Q SSC L D L+ I Sbjct: 179 VEEDDPNARAKEFYDVLSKLEFTPSTPTLFHSGTTHPQLSSCYLTTVPDDLEGIFDAYKH 238 Query: 244 IVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAAT 303 + G+G + +RA G+ I TG +PF + + ++ G R GAA Sbjct: 239 HAQLSKWSGGLGNDWTPLRAEGALIESTGVESTGVVPFLRISNDVTAAINRSGKRRGAAC 298 Query: 304 LFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPG 363 + +WHL+ + + LK G E R M+ I L R+ GE TLFSP +V Sbjct: 299 AYLAIWHLDFPAFVDLKRATGDERRRTPDMNTAAWIPDLFMERVQAGESWTLFSPDEVGD 358 Query: 364 LYDAFFADQEEFERLYTKYEK----DDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDH 419 L++A E F Y +YE+ D + V+A EL+ ++ TG ++ D Sbjct: 359 LHEAT---GEAFAEKYREYEQAAENGDIENFETVEAAELWRTLLTRLFETGHPWVTFKDP 415 Query: 420 CNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL------GAIN 473 CN SP D +R SNLC EI L N E A+C L + N G ++ Sbjct: 416 CNIGSPQDHE-GTIRSSNLCTEITL--------NTSTDEHAVCNLGSVNFATHMRDGELD 466 Query: 474 NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSD 533 D LE+ A+R LD ++D YP A+ M R +G+G + F L + G + Sbjct: 467 R-DYLEDTVETAMRMLDNVVDLCFYPTEEAEDSNMRHRPVGLGTMGFHEALMEIGVPMNS 525 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYK-------KD 586 A ++ E + Y+ ++ S+ELA E+GA P F + + + ILP DT ++ Sbjct: 526 NEAVEKANRWQEFVAYHAIRTSSELAGERGAYPSFEGSKWDRDILPQDTVDLLEEERGRE 585 Query: 587 LDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKA 646 + T E L +W+A+R+SI HG+RNS A+ P+ T S I+ T IEP + +K+ Sbjct: 586 IPTERTETL--EWDAVRKSIAEHGMRNSNTMAIAPTATVSTINGTTASIEPQYSNLYVKS 643 Query: 647 S--------------------------------KDGILRQVVPDYEHLHDAYELLWEMPG 674 + DG ++++ E L + Y +E+ Sbjct: 644 NMSGDFTIVNDHLVADLRERDLWDDEMRDRIKYHDGSIQEIEAIPEDLRELYRGAFEIDP 703 Query: 675 NDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDL-LTAYKFGVKTLYYQN 733 L+L Q +IDQS+S N FPS LL D+ TA++ G+KT YY Sbjct: 704 RH-QLRLTAHRQTWIDQSVSHNVF-----FPSTD---GTLLDDIYTTAWELGLKTTYYLR 754 Query: 734 T 734 T Sbjct: 755 T 755 >UniRef50_Q8JKL8 Ribonucleoside-diphosphate reductase n=1 Tax=Heliothis zea virus 1 RepID=Q8JKL8_9VIRU Length = 939 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 191/695 (27%), Positives = 313/695 (45%), Gaps = 62/695 (8%) Query: 6 LVTKRDGSTERINLDK----IHRVLDWAAEGLHNVSISQVELRSHIQ--FYDGIKTSDIH 59 ++ KR+GS ER + K I R + + L I+ + + ++ YD + T ++ Sbjct: 7 MIVKRNGSVERFDPSKLYARIERCMTMSEPRLTTAFINIAGIVADVEKGLYDRVSTLEL- 65 Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHL 119 +T++ +S PD+ LAAR+A+ L K+ +F + + + E + Sbjct: 66 DTLLSETCASMSTAHPDHSILAARIAMQALHKRTRSKFS-----ETIRDLYEANIVPQYY 120 Query: 120 LEDYTEEEFKQMDTFIDHDRDM-TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 D +E +D+ I DRD + +Y A K LE YL++ G+I E Q +Y+ A Sbjct: 121 F-DLVQEHADTLDSAIVDDRDFQSLTYFAYKTLERTYLIK-LADGKICERVQHMYMRTAL 178 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG-DSLDSI 237 + ++ V Y+ +S TP + T ++SC L+E DS+ + Sbjct: 179 GIHGR-----DIESVIETYNLLSNRYYVHSTPTLCHAATNRSNYASCYLLELKEDSIGGV 233 Query: 238 NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG- 296 T G+G++ ++R S I +G +P + + + +QGG Sbjct: 234 MDTLKDAATISKHCGGVGLHVHKLRCKNSTIHSTNGNASGLVPMLRMYNAMSRYVTQGGN 293 Query: 297 VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLF 356 R GA ++ WH +V + ++ N G E R R + Y + + L R+ G +L Sbjct: 294 KRPGAIAVYLEPWHADVFDFIEMRKNSGFEEARARDLFYALWVPDLFMKRVNDGGYWSLM 353 Query: 357 SPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQN 416 P PGL D + EEFE YT YE++ + RV A EL+ ++ + TG YI Sbjct: 354 CPDSSPGLSDCW---GEEFEAKYTAYEQEGRYVR-RVDARELWKAIVTAQVETGTPYILY 409 Query: 417 VDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL-----GA 471 D N +S + ++ SNLC EI P E A+C L++ NL G Sbjct: 410 KDTVNRNSN-QRHLGTIKGSNLCTEIVEYASP--------DETAVCVLASVNLPKFVEGK 460 Query: 472 INNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRY 531 + NL+ L + L R L+ ++D YPIP+A + R +GIGV +A LA G Y Sbjct: 461 VFNLNLLAKTVRLVTRNLNKIIDNALYPIPSAAKSNFKHRPIGIGVQGYADALAMMGIAY 520 Query: 532 SDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA 591 D + L FE I + L S +LA+ G ++ + ++G L D Y ++ Sbjct: 521 ED--SMQLNRDIFETIYHAALTESCQLARVHGVYESYHGSPTSRGELHFDRY-----SVH 573 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI 651 ++ DW +LR+ I +GLRNS L A MP+ T+SQ+ EP + + ++ G Sbjct: 574 SQKC--DWSSLRKDIARYGLRNSLLVAPMPTATTSQVFGNAESFEPFTSNMYQRRTQSGE 631 Query: 652 LR----QVVPDYEHLHDAYELLWEMPGNDGYLQLV 682 + +V D E L+ LW ND QL+ Sbjct: 632 FQLTNVHLVRDLERLN-----LW----NDDMAQLI 657 >UniRef50_B0R7R5 Ribonucleoside-diphosphate reductase n=2 Tax=Halobacterium salinarum RepID=B0R7R5_HALS3 Length = 804 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 201/734 (27%), Positives = 316/734 (43%), Gaps = 70/734 (9%) Query: 50 YDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKM 109 YD T + ++ ++ A I R P Y+ +A R+ L ++ ++P A D + Sbjct: 44 YDDATTDERYDALLGALTGRIDR-HPAYKTVAGRVLRERLERRLVDDYDP-ATRDAATRQ 101 Query: 110 -----VEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGE 164 ++ G + L E + + ++ I RD Y A+ L +Y ++ + Sbjct: 102 AFRDGIQRGLDADLLDERMGDYDLNRLADAITPARDDRLDYMAMDTLRQRYFLRE-PDAD 160 Query: 165 IYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSS 224 +E Q ++ VA + R +Y FYDA+ST + TP + T Q SS Sbjct: 161 PFELPQPFWMRVAMGVALREDPADREEYAIEFYDALSTLRFVHSTPTLFHAGTTHAQLSS 220 Query: 225 CVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKH 284 C L D LD I K G+G + +RA GS I TG +PF K Sbjct: 221 CYLTTVPDDLDGIFDAYKEHAKLSKWSGGLGNDWTPLRAAGSLIESTGVESTGTVPFLKI 280 Query: 285 FQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMY 344 + ++ G R GAA + WHL+ + L+ N G E R M+ I L Sbjct: 281 SNDVTAAINRSGKRRGAAAAYLACWHLDFPAFCDLRRNTGDERRRTHDMNTAAWIPDLFM 340 Query: 345 TRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK-QRVKAVELFSLMM 403 R+ + TLFSP + LY+ + +D E R Y D I++ +RV A +L+ M+ Sbjct: 341 ERVRADKQWTLFSPKETGDLYELYGSDFAERYREYEAMADDGDIQRFERVDATDLWRTML 400 Query: 404 QERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCT 463 TG ++ D CN SP D A VR SNLC EI L N E A+C Sbjct: 401 TRLFETGHPWLTFKDPCNVRSPQDHA-GTVRSSNLCTEITL--------NTSEEETAVCN 451 Query: 464 LSAFNL------GAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGV 517 L + NL G I+ ++L E A+R LD ++D YP A+R M R +G+GV Sbjct: 452 LGSVNLARHLDDGDIDR-EQLSETVETAMRMLDNVVDLNFYPTENAERSNMRHRPVGLGV 510 Query: 518 INFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGI 577 + F L + + A + E + Y+ + AS +LA E+G + + + + + Sbjct: 511 MGFHDALQQMRVPMASDDALDRADALQEYVAYHAIGASADLAAERGTYESYEGSKWDRDV 570 Query: 578 LPIDTYKKDLDTIANE-PL----HYDWEALRESIKTHGLRNSTLSALMPSETSSQISNAT 632 P DT + E P+ DW +R+ + THG+RNS A+ P+ T S I+ T Sbjct: 571 FPQDTVDRLESERGREIPVPREERLDWSDVRQRVATHGMRNSNTMAVAPTATISTIAGTT 630 Query: 633 NGIEPPRGYVSIKASKDG----ILRQVVPDYEHLHDAY--ELLWEMPGNDGYLQLVGIMQ 686 IEP + +K++ G + ++V D E D + EL ++ +DG +Q + + Sbjct: 631 PSIEPVYSNLYVKSNMSGDFTVVNDRLVADLEE-RDLWTEELRDKLTYHDGSVQELDAVP 689 Query: 687 K--------------------------FIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 + +IDQS S N FP + +L + T Sbjct: 690 EDVQELYRTAFEIDPRHQLRLAARRGVWIDQSQSVNVF-----FP--ETDGSKLSEVYQT 742 Query: 721 AYKFGVKTLYYQNT 734 A++ G+KT YY T Sbjct: 743 AWELGLKTTYYLRT 756 >UniRef50_B7FY00 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillariophyta RepID=B7FY00_PHATR Length = 926 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 222/792 (28%), Positives = 348/792 (43%), Gaps = 103/792 (13%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHI--QFYDGIKTSDIHET 61 L V+KRDG E ++ K+ + L ++GL ++ V L I Y + T +I Sbjct: 66 TLHVSKRDGRLELLDSTKLLQRLTDLSDGLDMRFLNLVALTESIVRGMYPNVTTHEIDVL 125 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGK-YDNHLL 120 + AA L ++ PDY LAAR+ I K P + + + GK + +H + Sbjct: 126 AAETAASLGTQH-PDYGRLAARILITQNHKTT-----PTCFSEAIETLYNSGKGFIDHKV 179 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 + ++D+ I H+RD+ +Y K LE YL++ ++ E Q+L + VA + Sbjct: 180 GELVRRRGPEIDSRIVHERDLEMTYFGYKTLERAYLLKKDNGNQVLERPQYLMMRVALGI 239 Query: 181 FSNYPRETR-----LQYVKRFYDAVST--FKISLPTPIMSGVRTPTRQFSSCVLIECG-D 232 +R L+ YD +S F + PT +G P Q SSC L++ D Sbjct: 240 HCTSKMSSRSEDDCLEAAFETYDLMSRGFFTHASPTLFHAGTTHP--QLSSCFLVQMSED 297 Query: 233 SLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSC 292 S++ I T GIG++ IRA G+PI+G G +P + F + Sbjct: 298 SINGIYDTLKRCAVISKAAGGIGLSVHNIRARGTPIQGTRGVSNGLVPMLRVFDVTSRYV 357 Query: 293 SQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 QGG R GA ++ WH ++ +L LK N G E R R + YG+ I L R+ + + Sbjct: 358 DQGGGKRPGAFAIYLEPWHADIFDVLSLKKNHGKEEQRARDLFYGLWIPDLFMKRVEEDD 417 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR 411 +L P PGL + A +FE LY YE++ +Q V+A EL+ +++ + TG Sbjct: 418 VWSLMCPHQCPGLAHCYGA---KFEALYQHYEQEGKFVRQ-VRARELWGAILESQIETGT 473 Query: 412 IYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL-- 469 Y+ D CNT S I ++ SNLC EI +D+ E A+C L++ L Sbjct: 474 PYMLYKDTCNTKSN-QQNIGTIQCSNLCTEII-------QYSDQE-ETAVCNLASICLPR 524 Query: 470 ---------GAIN--------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRT 512 G+I+ + + L A + R L++++D YP+ AK R Sbjct: 525 FVVSERGTFGSISPESGSAFFDHEALHRAAKIVTRNLNSIIDVNSYPVDGAKTSNFKHRP 584 Query: 513 LGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETT 572 +GIGV A + G ++ +A L FE I + L+AS ELA+++G F + Sbjct: 585 IGIGVSGLADAFLRLGLPFTSAAAKKLNEAIFETIYHAALEASAELAEKEGPYETFAGSP 644 Query: 573 YAKGILPIDTYKKDLD-------TIANE---PLH----------YDWEALRESIKTHGLR 612 ++G L + + D +A E P+ YDWE+LR I GLR Sbjct: 645 ASQGKLQFNLWGLSDDETPSHKYALAKETPVPIQMYPNSSNVCGYDWESLRRRIVKTGLR 704 Query: 613 NSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY-EHLHDAYELLWE 671 NS A S + S +S T + +DG Q +PD + L + Y+ +WE Sbjct: 705 NSLSWA---STSVSSLSAQT---------FRNQMMRDGGSVQNIPDIPDRLKELYKTVWE 752 Query: 672 MPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LY 730 + D + + KFIDQ N N M +L A+K G+KT +Y Sbjct: 753 IKMKD-IIDMGADRGKFIDQ----NPN------------MDKLTAMHFYAWKKGLKTGMY 795 Query: 731 YQNTRDGAEDAQ 742 Y T+ Q Sbjct: 796 YLRTKPAVNAIQ 807 >UniRef50_Q7T6Y8 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=RIR1_MIMIV Length = 881 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 192/732 (26%), Positives = 321/732 (43%), Gaps = 79/732 (10%) Query: 57 DIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPA--LYDHVVKMVEMGK 114 DI II A+++++ D DY +A + + +L F A LY++ + + Sbjct: 123 DIDNQIISTASEMVT-DHYDYPKIAVWILMTNLHDNTSDDFLETAEKLYNNKSESNKNAP 181 Query: 115 YDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYI 174 + + ++ ++ K+++ I +DRD + + LE YL R+ +I E Q L++ Sbjct: 182 IISENIYNFIKKHIKEINRVIRYDRDYNLTIFGFRTLEKSYL--KRINKKIVERPQHLFM 239 Query: 175 LVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSL 234 VA L + R+ L + Y +S + TP + T Q SSC L+ GDSL Sbjct: 240 RVAITL---HYRKNDLDRIFETYKYLSKGYFTHATPTLFNAGTTHEQLSSCFLLGIGDSL 296 Query: 235 DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRG--GEAFHTGCIPFYKHFQTAVKSC 292 + I+ GIGI+ IR G+ I GEA G + F + Sbjct: 297 EEISECWKECALISKHAGGIGIHMTNIRVEGAYIASTQGEA---GGLRVLTIFNDISRYA 353 Query: 293 SQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGED 352 +QGG R G+ +F WH ++ L LK N G E R R + G+ IN + R+ K + Sbjct: 354 NQGGKRPGSFAIFIEPWHGDIFFFLDLKKNTGAETERARDLFLGLMINDIFMERVYKDDV 413 Query: 353 ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRI 412 +L PS P L + + +EF + Y KYE + KQ ++A++L+ +M+ + TG Sbjct: 414 WSLMCPSQCPNLLNKY---GDEFTKEYLKYESEGIYLKQ-IRAIDLWFKIMESQIETGVP 469 Query: 413 YIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI 472 Y+ D N S I V SNLC EI +V+D+N ++C LS+ L Sbjct: 470 YVMFKDAINDKSN-QINIGVVNGSNLCCEIV-------EVSDKNN-FSVCNLSSICLPRF 520 Query: 473 N---------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYY 523 N +L +++ + R L+ ++D YP+ + + R +GIGV A Sbjct: 521 VKIIDEVPTFNYQKLFKISRILTRNLNNIIDINFYPLDKTRITNLRDRPIGIGVQGLADV 580 Query: 524 LAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTY 583 A + A +L K FE I Y L SN+LA+E G + + ++G D + Sbjct: 581 FAMFKTPFDSEIARDLNRKIFETIYYGALTESNKLAREFGTYQTYQGSPISQGKFQFDLW 640 Query: 584 KKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVS 643 D ++ +DWE LR+ I HG+RNS ++ MP+ ++SQI IEP + Sbjct: 641 NFDKSQLSG---MWDWELLRQEILNHGVRNSLVTTCMPTASTSQIMGWNECIEPYTENIY 697 Query: 644 IKASKDG----ILRQVVPDY----------------------------EHLHDAYELLWE 671 +++ G I + ++ D +++ Y +WE Sbjct: 698 SRSTMAGEYFVINKHLIKDLIELGVWNSEMVDLIKYYKGSVANIPNIPDNIKAIYRTVWE 757 Query: 672 MPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LY 730 +P +++ F+DQ+ S N D F +L L A++ G+KT +Y Sbjct: 758 IP-QKSIIEMAADRAPFVDQTQSMNLYIDKPSFA-------RLNSCLFYAWRKGLKTGMY 809 Query: 731 YQNTRDGAEDAQ 742 Y ++ + Q Sbjct: 810 YLRSKPASSANQ 821 >UniRef50_A7KUZ9 Nrd alpha subunit n=2 Tax=root RepID=A7KUZ9_9CAUD Length = 767 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 185/730 (25%), Positives = 311/730 (42%), Gaps = 86/730 (11%) Query: 58 IHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKA-----------YGQFEPPALYDHV 106 +H +I A + I APD+ ++AA + + + K A YG F Y + Sbjct: 51 LHNSIFYALNN-IDMGAPDWTFVAANMKLQQMYKTASENRGYSRSLKYGSF-----YKLI 104 Query: 107 VKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIY 166 + EMG Y +L Y+EEE ++ ID +D F++ + L +Y + G +Y Sbjct: 105 KTLTEMGIYSPAILASYSEEEINEIGRMIDPSKDSLFNFIGLFLLNDRYAATD-YQGSLY 163 Query: 167 ESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCV 226 E Q +++A N P+ TRL ++K Y A+S + TP + Q SSC Sbjct: 164 ELPQERLMMIAVTTMINEPKATRLAHIKELYWALSNLYATAATPTFANAGKSYGQLSSCF 223 Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ 286 + + DSLD I ++ + G+ + ++RALGSPI+G E +G P+ K F Sbjct: 224 IDKVDDSLDGIYLSNMDAARLSKDGGGVALYFSKVRALGSPIKGFEGKSSGTTPWIKMFN 283 Query: 287 TAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR 346 + Q G R GA ++ + H ++ L L N G E +R R + GV + L + Sbjct: 284 QTAITVDQLGQRKGAFAIYMCLDHKDIMKFLELGLNNGDEADRAREIFTGVAVPDLFMKK 343 Query: 347 L----LKGEDIT---LFSPSDVPG------------LYDAFF--ADQEEFERLYTKYEKD 385 L G I F P + D F+ D + +E Y + + Sbjct: 344 LDEVDENGRSIGQWHTFCPHQIKQHMQWKDENGNLLTLDDFYDEKDTKYYEEKYMEAVNN 403 Query: 386 DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQ----SNLCLE 441 + + +A+++ +M+ + TG Y+ D N +P R SNLC E Sbjct: 404 PLLPRDTHRAMDIMVRIMEIQLETGMPYMFYRDQVNRMNPNKHVHGIGRTAIYCSNLCTE 463 Query: 442 IA---LPTKPLNDVNDEN---------GEIALCTLSAFNLGAINNLDELEELAILAVRAL 489 IA + + + + DEN GE +C L++ NL L + + R L Sbjct: 464 IAQNQVSSMIIGEYIDENENIHMVRSPGEYVVCNLASVNLAKAVPAGVLARVIRIVTRML 523 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 D ++D + A R +G+G + + LA G + +A N +E Y Sbjct: 524 DNIIDINTISVLQAGITNKRYRPIGMGAYGWHHLLAILGLDWESEAAVNYADTLYEEFAY 583 Query: 550 YLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH 609 +++ +S ELAKE+G +F + + G Y D ++ + W+AL+E + Sbjct: 584 HVIDSSVELAKEKGTYKYFEGSAWHTG-----EYFDQRDYVSAK-----WKALKEKVAKF 633 Query: 610 GLRNSTLSALMPSETSSQISNATNGIEP--------PRGYVSIKASKDGILRQVVPDYEH 661 G+RN + AL P+ T++++ +T+G +P +G K + G+ Y Sbjct: 634 GVRNGWMMALAPNATTAKVGGSTDGNDPITAVEGAEEKGNFKFKVTAPGLDHNTYNVYRK 693 Query: 662 LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTA 721 + LW ++ Q+ IDQSIS N + + + +LL TA Sbjct: 694 TRHHIDQLWS-------VKQTAKKQRHIDQSISFNL------YVASDIDGAELLNIHKTA 740 Query: 722 YKFGVKTLYY 731 +K G+KT YY Sbjct: 741 HKLGIKTTYY 750 >UniRef50_D2E8G7 Ribonucleoside-diphosphate reductase n=1 Tax=Anguillid herpesvirus 1 RepID=D2E8G7_9VIRU Length = 833 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 206/806 (25%), Positives = 336/806 (41%), Gaps = 100/806 (12%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHET 61 N V K G TE + K+ L+ + GL+ V + ++ + YDGI T ++ + Sbjct: 3 NFSVRKHSGRTEMWSTKKMLSKLESLSYGLNTDFVDLDRLVTATMDGLYDGITTKELDDV 62 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE 121 + + AA S DY LA R+ + + K G F A V + M + H+ + Sbjct: 63 MARTAAGFTSYHF-DYSLLAGRIVVNSIHKYTVGNFLQGA-----VLLQNMDETKPHVTD 116 Query: 122 DYTEEEFK---QMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 + K Q+ ID+ RD TF++ A++ LE YL+ +V + E Q L++ +A Sbjct: 117 ELVAVARKYENQIQGAIDYSRDYTFNFFAIRTLERAYLL--KVNERVMERPQHLFMRIAI 174 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGD-SLDSI 237 + L+ V Y +S + S +P + T + +SC L+ D S+ I Sbjct: 175 GIHG-----FDLESVLETYRCLSEKRFSHASPTLFHAGTNFAKLASCYLVTLADDSIAGI 229 Query: 238 NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG- 296 +T + GIG +RA GS I G +P + F + QGG Sbjct: 230 YSTLQECAQIAKCSGGIGAAISNVRAEGSAINSTNGTANGLVPMLRVFNAMTRMVDQGGN 289 Query: 297 VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLF 356 R GA ++ WH ++ + L LK N G +G R R + YG+ I+ L R+ + +L Sbjct: 290 KRPGAMAVWLEPWHADIAAWLDLKKNLGDDGIRARDLFYGLWISDLFMERVKDDQMWSLM 349 Query: 357 SPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQN 416 P PGL D + +D F LYTKYE KQ V+A EL++ +++ + G ++ Sbjct: 350 CPKKCPGLMDVYGSD---FVALYTKYESQGMYVKQ-VEARELWTHILRSQMENGMPFMMY 405 Query: 417 VDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN--- 473 D CN S + V+ NLC EI ++P + L T A G Sbjct: 406 KDSCNRKSN-QQHVGVVKCGNLCTEIVEVSEPHRPAVCNLAAVCLPTCVACECGIRQASR 464 Query: 474 -----------------------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGR 510 + EL L + V+ L+ ++D DY A Sbjct: 465 TEVASSASSAVQACEDPTCRKSFDFGELGRLTEVLVKNLNRVIDKSDYAFDGANHRNSQD 524 Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNE 570 R LGIGV A A G + A L + FE + Y+ + AS +LA+E P + Sbjct: 525 RPLGIGVQGLADVFAMLGLAFDGTEAARLNVQIFETMYYHAMAASCKLAEEDQPYPTYKG 584 Query: 571 TTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISN 630 + ++GI D + + +H DW +L+ ++ +G+RNS L A MP+ +++QI Sbjct: 585 SPVSQGIFQFDMWG-----VKPSAMH-DWTSLKRRVQKYGVRNSLLLAPMPTASTAQIFG 638 Query: 631 ATNGIEP------PRGYVS--------------IK------------ASKDGILRQVVPD 658 EP RG +S I+ + +G +R Sbjct: 639 NNEAFEPFTNNLFTRGVLSGDFQIINPHLVRELIRLGMWGEETRMRLMADNGSIRTWEDV 698 Query: 659 YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNY-DPSRFPSGKVPMQQLLKD 717 +H D ++ +WE+ + + FIDQS S N + DP+ + +L Sbjct: 699 PQHTRDVFKTVWEI-SQKTIINMAADRAPFIDQSQSLNIHMADPN--------VSKLSSM 749 Query: 718 LLTAYKFGVKT-LYYQNTRDGAEDAQ 742 + ++ G+KT +YY +R Q Sbjct: 750 HMYGWQKGLKTGMYYLRSRPAVNAIQ 775 >UniRef50_Q75BW6 Ribonucleoside-diphosphate reductase n=2 Tax=Saccharomycetaceae RepID=Q75BW6_ASHGO Length = 864 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 215/776 (27%), Positives = 335/776 (43%), Gaps = 107/776 (13%) Query: 53 IKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEM 112 I+ S++ I + A +I+R PD+ LAAR+ I L K+ G ++ + E Sbjct: 58 IRDSELVAYIGETLASMITRH-PDFSLLAARVEIKVLHKRLLGL----GFTGNLAVLCES 112 Query: 113 GKY-DNHL------------------LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEG 153 G + H L D + +D ID D TF+Y K L Sbjct: 113 GDSPEGHATKRKRAMSPCTRGPVRRELYDLAVQHRNIIDQAIDDTLDFTFTYFGWKTLCK 172 Query: 154 KYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMS 213 YL++++ G ++E+ Q++++ VA L R+ R A F + PT + Sbjct: 173 SYLLKHQ--GRVHETPQYMFMRVALALHGPSGDIDRVLETYRLM-ANKYFIHASPTLFNA 229 Query: 214 GVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYV---SQRAGIGINAGRIRALGSPIRG 270 G T ++ SSC L+ G DSI+ +A+ K GIGI+ IRA GS I G Sbjct: 230 G--TTSQFLSSCFLL--GIHEDSIDGIYNALHKAALISKASGGIGIHVSDIRANGSYISG 285 Query: 271 GEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNR 329 G +P F + + QGG R GA ++ WH +V L L+ N G E R Sbjct: 286 TNGTSNGLVPMLSVFNSTARYVDQGGNKRPGAFCIYLEPWHADVFDFLRLRRNHGKEEMR 345 Query: 330 VRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIR 389 R + YG+ I L R+ + +LFSP++ GL D + E FE+LY +YE++ Sbjct: 346 ARDLFYGLWIPDLFMKRVENNGEWSLFSPNEAVGLSDCY---GEAFEQLYVRYERELEPY 402 Query: 390 KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPL 449 + RVKA EL+ ++ + TG ++ D CN+ S + ++ SNLC EI + Sbjct: 403 R-RVKAQELWREILLSQTETGGPFMLYKDACNSKSN-QKNLGTIKSSNLCCEIVEYSS-- 458 Query: 450 NDVNDENGEIALCTLSAFNLGAINNLD---------ELEELAILAVRALDALLDYQDYPI 500 E+A+C L++ L ++ L + + R LD +D DYP+ Sbjct: 459 ------RDEVAVCNLASVALPTFVSVTSDAITFDYARLHSVVKVMTRNLDKAIDIGDYPV 512 Query: 501 PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAK 560 P A+R R L +GV A ++ A + + FE I + ++ S ELA Sbjct: 513 PEAERSNKKHRPLALGVQGLADVFMLMRFPFNGEEAAQMNREIFETIYHAAVETSIELAA 572 Query: 561 EQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH-GLRNSTLSAL 619 E G F + +KG L D + ++ D + L+ DW+ L+E IK+ GLRNS L Sbjct: 573 EYGVYASFVGSPASKGELQFDLWGRNKDNY--QFLYDDWDELKEKIKSGPGLRNSLLVGP 630 Query: 620 MPSETSSQISNATNGIEPPRGYVSIKASKDG----ILRQVVPDY---------------- 659 MP+ ++SQI T EP + + G + + +V D+ Sbjct: 631 MPTASTSQILGFTESFEPMTSMIYTRRVLSGEYTLVNKYMVQDFCDLGIWSEELKNRIIK 690 Query: 660 ------------EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNY-DPSRFPS 706 L D Y+ +WE+P + L F+DQS S N +P+ Sbjct: 691 DGGSIQGIDGIPPDLKDLYKTVWELPQRK-LIDLSADRAPFVDQSQSLNLFLKEPT---- 745 Query: 707 GKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 M +L A+K G+KT +YY T+ A Q L D+ SG K+ Sbjct: 746 ----MGKLTSMHFYAWKKGLKTGMYYLRTQAAANAIQFTLT----DENTLSGPVKL 793 >UniRef50_B7XJ88 Ribonucleoside-diphosphate reductase n=2 Tax=Enterocytozoon bieneusi H348 RepID=B7XJ88_ENTBH Length = 778 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 196/746 (26%), Positives = 328/746 (43%), Gaps = 90/746 (12%) Query: 75 PDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTF 134 P Y LAA + I HL + + F +Y K + +D+H++E ++ Sbjct: 62 PSYNKLAAIILIKHLHENTFNTFSDKMMYIQQEKNI----FDDHIME-LIINNMNVYNSI 116 Query: 135 IDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVK 194 + ++RD F Y A+ L+ Y +Q V + E Q +Y+ VA L + V+ Sbjct: 117 VKYERDYNFDYFALISLQKSYQIQ--VNNTVIERPQDIYMRVAIELHGD-----DFNNVQ 169 Query: 195 RFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSINATSSAIVKYVSQRAG 253 + YD +S + TP + Q +SC L+ D++ I T Y G Sbjct: 170 KTYDLLSQQYYTHATPTLYNSCFKKNQLASCFLLGMKSDTIAGIFDTIKEAAIYSKLSGG 229 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFY-PMWHLE 312 +G++ +R S + + G IP K ++K +QGG R A FY WH + Sbjct: 230 VGLHISNLRCDKSQLVTTGGYSKGIIPIVKLINDSMKYINQGGARRCATCAFYLEPWHKD 289 Query: 313 VESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQ 372 + L L+ N G+E R R + IN L R+ K E +LF P+ GL D + DQ Sbjct: 290 ILKFLDLRKNTGIEEERARDSFTALWINDLFMERVEKNEMWSLFDPNIAKGLQDVW-GDQ 348 Query: 373 EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP 432 F +LY YE ++I + + A +L+ ++ + TG Y+ D CN +S I Sbjct: 349 --FNKLYAYYE--ETIERTTIPAQKLWKEIICSQIETGTPYMCYKDTCNRYSN-QNNIGT 403 Query: 433 VRQSNLCLEIALPTKPLNDVNDENGEI-ALCTLSAFNLGA---IN--------NLDELEE 480 ++ SNLC EI + + +I A+C L++ L IN + EL Sbjct: 404 IKSSNLCAEI---------IQYSDSDITAVCNLASICLPKYVKINSTTSNYYFDFQELYT 454 Query: 481 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 + + ++ ++D +P +K+G R +GIGV A G + A +L Sbjct: 455 VVKIVTYNMNKMIDKSAFPTEESKKGNSLFRPIGIGVQGLADVFFLMGYSFESKEARDLN 514 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH--YD 598 FE + + L+AS ELA++ G ++ + Y++GI + + + + NE L ++ Sbjct: 515 KMIFETLYFGALEASCELAQKHGPYSYYQGSMYSQGIFHFEKFCEGRINV-NEILSGMWN 573 Query: 599 WEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS----------- 647 WE LR +KT+G+RNS ALMP+ ++SQI + IEP + + + + Sbjct: 574 WEELRIKMKTYGVRNSLTLALMPTASTSQICGNSECIEPIQSNIFTRRTFAGEFQIVNKY 633 Query: 648 --KDGI--------LRQVVPDYE-----------HLHDAYELLWEMPGNDGYLQLVGIMQ 686 KD I ++Q++ +YE H+ D Y+ +WE+ L + Q Sbjct: 634 LMKDLIKLGLWNNEIKQLIIEYEGSIQKIPIIPQHVKDLYKTVWELKMK-SVLDMAIDRQ 692 Query: 687 KFIDQSISANTNY-DPS-------RFPSGKVPMQQLLKDLLT-----AYKFGVKTLYYQN 733 F+DQS S N +P+ F K ++ + L T A KF V Sbjct: 693 AFVDQSQSLNLFVKEPTYGILSSMHFYGWKNKLKTGMYYLRTCPLAKAIKFTVDKELILK 752 Query: 734 TRDGAEDAQDDLVPSIQDDGCESGAC 759 T +D+++D + ++D CE +C Sbjct: 753 TLSSFKDSENDKKLNKENDYCEGCSC 778 >UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPP8_9BACL Length = 574 Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 144/464 (31%), Positives = 224/464 (48%), Gaps = 21/464 (4%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETI 62 + V KRDG E ++LDKI L E ++ Q DG++TS+I Sbjct: 37 KTFTVEKRDGRIEPLSLDKIFAFLRRGCEAAEGCDPERLAADVWPQLRDGMRTSEIARVA 96 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKA----------YGQFEPPALYDHVVKMVEM 112 I+AA + S P +Q++AARL + K+A YG F Y +V++ + Sbjct: 97 IQAAVEKTSVAEPGWQFVAARLLLLDAYKQASRNRGYRHLGYGDF-----YQLIVELERI 151 Query: 113 GKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFL 172 G+Y ++ E Y+E+E ++ +I +RD +Y +KQL +Y ++N G I E Q L Sbjct: 152 GRYGTYIREHYSEDEIAELAAYIKPERDHLLNYVGLKQLLDRYAIRNLDNG-IMELPQEL 210 Query: 173 YILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGD 232 ++ V+ L + ++ + KRFYD +ST + ++ TP +S R P Q SSC + D Sbjct: 211 FMGVSMHLAMK--EKDKVAWAKRFYDMLSTLQATVATPTLSNARKPFHQLSSCFIDMPED 268 Query: 233 SLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSC 292 L SI AT A + G+GI G+IRA GS IR G +P+ ++F SC Sbjct: 269 DLVSIYATDEAFARVSKFGGGMGIYVGKIRARGSAIRNHPGASGGVVPWIRNFNNTAVSC 328 Query: 293 SQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGED 352 +Q G+R GAA ++ +WH ++ L L+ N G E + + GV I L R+ + Sbjct: 329 NQLGMRAGAAAVYLDVWHKDILDFLQLRTNNGDERMKAHDIFPGVCIPDLFMRRVEERGM 388 Query: 353 ITLFSPSDVPGLYDAFFADQ--EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTG 410 LF P +V + D EEFER Y ++ ++ + + A+E+ +MQ TG Sbjct: 389 WYLFCPYEVRKVMGFSLEDSWGEEFERRYEACVENPNLPRVEIPAIEIMKRIMQSAFETG 448 Query: 411 RIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND 454 +I D N +P A V SNLC EI P + + Sbjct: 449 TPFIFFRDTANRLNPNKHA-GMVYCSNLCTEIIQNMSPSRRIEE 491 >UniRef50_C5DY80 Ribonucleoside-diphosphate reductase n=1 Tax=Zygosaccharomyces rouxii RepID=C5DY80_ZYGRO Length = 875 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 203/772 (26%), Positives = 325/772 (42%), Gaps = 107/772 (13%) Query: 62 IIKAAADLISRDA---PDYQYLAARLAIFHLRKK--------------------AYGQFE 98 +I+ AA+ ++ PD+ LAARL I L K + G Sbjct: 60 VIRHAAETVASLTSIHPDHSILAARLEIDELHKSLRGITFTENLKQLRSSTRVTSEGDNR 119 Query: 99 PPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQ 158 P+ V++ + G L+ + E K+++ I H+RD F+Y K L YL++ Sbjct: 120 VPSKRQKVMRAPKKGVISEEFLQMALKYE-KKLNDAIVHERDFNFTYFGWKTLCQSYLIK 178 Query: 159 NRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP 218 +I+E+ QFL++ VA + + + V Y+ +S +P + T Sbjct: 179 KNAD-QIHETPQFLFMRVALAIHGPF---EDIDSVIETYELMSRKYFIHASPTLFNAGTV 234 Query: 219 TRQFSSCVLIECG-DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTG 277 + SSC L+ DS++ I T GIGI+ IRA G+ + G G Sbjct: 235 NQYLSSCFLVGMKEDSIEGIFKTLEDTALISKASGGIGIHVSNIRASGAHVSGSNGTSNG 294 Query: 278 CIPFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYG 336 +P + F + QGG R GA ++ WH +V L L+ N G + R R + + Sbjct: 295 IVPMLRVFNNTARYVDQGGNKRPGAYCIYLEPWHSDVFDFLQLRKNHGKDELRARDLFFA 354 Query: 337 VQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAV 396 + I L R+ + +LFSP + PGL D + +EFE LY +YE ++ +RVKA Sbjct: 355 LWIPDLFMKRVQCNGEWSLFSPDEAPGLSDVY---GKEFEELYEQYEA-TALPMKRVKAQ 410 Query: 397 ELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDEN 456 +L+S ++Q + TG ++ D CN S + ++ SNLC EI + Sbjct: 411 KLWSEILQAQVETGGPFMLYKDSCNLKSN-QKNLGTIKSSNLCCEIVEYSS--------K 461 Query: 457 GEIALCTLSAF----------NLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRG 506 E A+C L++ N G+I + +L + R LD ++D YPIP A+ Sbjct: 462 DETAVCNLASVALPTFVVQVTNKGSIFDFVKLHAVVKTITRNLDRVIDVCKYPIPQAQYS 521 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 + R IGV A Y A L + FE I + ++ S ELA+E GA Sbjct: 522 NLRNRPEAIGVQGLADVFLMLRIPYESQEARILNTQIFETIYHAAVETSIELAEEYGAYE 581 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKT-HGLRNSTLSALMPSETS 625 F + ++G+L D + + D + L+ DW L+ I+ GLRNS L MP+ ++ Sbjct: 582 TFQGSPASQGLLQFDLWGLNEDNY--DFLYRDWGELKHRIQNGRGLRNSLLLGPMPTAST 639 Query: 626 SQISNATNGIEPPRGYVSIKASKDGILRQV------------------------------ 655 SQI T EP V + G V Sbjct: 640 SQILGYTESFEPMTSNVYARRVLSGEFINVNQYMVDHFCQLGIWNEKLKNRIIADNGSVQ 699 Query: 656 ----VPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVP- 710 +PD+ + Y +WE+P + + FIDQS S N K P Sbjct: 700 NIQGLPDW--IKKIYRTVWEIP-QRPLIDMARDRSPFIDQSQSLNLFM--------KTPT 748 Query: 711 MQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 M +L A++ G+KT +YY T+ + Q ++ D+ +G+ ++ Sbjct: 749 MGKLTSMHFHAWRHGLKTGMYYLRTQAASAAIQF----TVNDENTLTGSVEL 796 >UniRef50_B4UA32 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA32_HYDS0 Length = 1005 Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 177/645 (27%), Positives = 286/645 (44%), Gaps = 91/645 (14%) Query: 7 VTKRDGSTERINLDKIHRVLD----------------------WAAEGLHNVSISQVELR 44 V KR G+ E+++L KI VL+ W E L+ ++I ++ Sbjct: 3 VIKRSGAREKLDLLKIRTVLENALSLLKEWKTTKDISAQDIEEWTMEDLNEINIDEIMED 62 Query: 45 SHIQFYDGIKTSDIHETIIKAAADLISR--DAPDYQYLAARLAIFHLRKKAYG-QFEPPA 101 I +DGI+T+ I + I+ + L++R D P Y +A + + + K+A+G + P Sbjct: 63 IEINIFDGIETAAIFQHILHS---LLTRAIDDPIYDAMARNVLLQRIYKQAFGGMYSPKK 119 Query: 102 LY-----DHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYL 156 Y D++ VE+G D L Y + + + + RD + + L +YL Sbjct: 120 AYKELFIDYIDNAVELGLLDEKLASYY---DLEMLALELVPKRDQLLKFNGLYNLMDRYL 176 Query: 157 VQNRVTGEIYESAQFLYILVA--ACLFSNYPRETRLQYVKRFYDAVSTFKI--SLPTPIM 212 +++ TG I E+ Q+ ++ VA L P E R + FY +S+ + S PT Sbjct: 177 IKDLDTGNILEAPQWFWMRVAMGVALVEKTP-EDRNHWAIEFYHMMSSMEFIPSTPTLFN 235 Query: 213 SGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGE 272 SG R P Q SSC +++ D L I T + G+G+ A ++RA S IR + Sbjct: 236 SGTRFP--QLSSCFVVDEEDDLSKIFETVKQVGMLNKHAGGVGLPATKLRAKDSIIRSIQ 293 Query: 273 AFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRH 332 +G IPF K + + SQGG R G+A WHL+V + K G + R ++ Sbjct: 294 GKSSGIIPFLKIIDETITAVSQGGRRRGSALASLEPWHLDVFDFVRTKRKWGDDSQRFKN 353 Query: 333 MDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK---DDSIR 389 + + +N R+ + D LF P+D P L + ++F R Y+K + IR Sbjct: 354 LKIALFLNDEFMRRVEENGDWYLFDPADCPKLVSTY---GKKFSREYSKCIRKALSGKIR 410 Query: 390 KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLE-------- 441 +++KAVELF ++ TG + D N P + + +NLC E Sbjct: 411 HKKIKAVELFKEAIENTIQTGEPWYTFKDPINIRHP-NKHTGTILTTNLCTEQLLVSTYD 469 Query: 442 ---------IALP------------TKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE 480 + LP +PLN + ENG LS NN + E+ Sbjct: 470 SIESCNLGSLVLPRALLTHFRVNEHAQPLN--SSENGSKHTKFLS-------NNTFDWEK 520 Query: 481 LAIL---AVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSAN 537 + A+R LD ++D Y + A ++G R +G+G + + + K A Sbjct: 521 FKAVIRKAIRFLDNVIDANYYALEAVEKGTKQSRKIGLGFMGYQDMIEKLKLPVDSKEAL 580 Query: 538 NLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDT 582 L K E + Y ++ S ELAKE+G P F+ + ++KGILPIDT Sbjct: 581 KLLDKIGETMSYVAIETSVELAKERGTYPNFDGSDWSKGILPIDT 625 >UniRef50_C7NLI3 Ribonucleoside-diphosphate reductase n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NLI3_KYTSD Length = 875 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 216/812 (26%), Positives = 339/812 (41%), Gaps = 123/812 (15%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETII 63 + V KR G E++++ KI ++ +GL V +V ++ YDG T+++ + I Sbjct: 35 TMRVVKRSGEHEQVDVTKIVAAVERCCDGLPEVDPLRVATKTISGLYDGATTAELDKLAI 94 Query: 64 KAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLED- 122 AA++ + + P Y LA RL + K+ GQ V G ++ L+ D Sbjct: 95 ATAAEMTATE-PQYSRLAGRLLAGVIDKEVRGQG-----IGSFSAAVRTG-HEQGLIGDE 147 Query: 123 ---YTEEEFKQMDTFIDHDR----DMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYIL 175 + E ++D + + D F Y ++ + +YL+++ +T + ES Q+ + Sbjct: 148 TAAFVAEHASRLDDAVYRAQAAHADWRFDYFGLRTVYDRYLLRHPLTRAVVESPQYWLMR 207 Query: 176 VAACLFSNYPRETRLQYVKRFYDAVSTFKI--SLPTPIMSGVRTPTRQFSSCVLIECG-D 232 V+A L ++ E ++ F++ +S+ S PT SG R Q SSC LI+ D Sbjct: 208 VSAGL--SHTGEEAVE----FFELLSSLAYLPSSPTLFNSGTRH--TQMSSCYLIDSPQD 259 Query: 233 SLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSC 292 LDSI + K GIG+ RIR+ G+ IRG G +P+ + +V + Sbjct: 260 DLDSIYERYHQVAKLSKFAGGIGLAFSRIRSRGALIRGTNGHSNGIVPWLRTLDASVAAV 319 Query: 293 SQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGED 352 +QGG R GAA ++ WH +VE L L++N G + R +++ I R+ Sbjct: 320 NQGGRRKGAACIYLEPWHPDVEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVEADGQ 379 Query: 353 ITLFSPSDVPGLYDAFFADQEEFERLY-TKYEKDDSIRKQRVKAVELFSLMMQERASTGR 411 +L P VP L D + F+ Y E+ D +R V A L+ MM+ A TG+ Sbjct: 380 WSLIDPDAVPELPDLW---GPAFDAAYRAAEERGDVVRT--VSARYLYGRMMRTLAQTGQ 434 Query: 412 IYIQNVD----HCNTHS-------PFDPAIAP---VRQSNLCLEIALPTKPLNDVNDENG 457 ++ D CN S D + P V SNLC EI T N Sbjct: 435 GWMTFKDASNRACNQTSDDQTPRVAADGTVQPAPVVHLSNLCTEIIEVTS--------ND 486 Query: 458 EIALCTLSAFNLGA---------------------INNLDELEELAILAVRALDALLDYQ 496 E A+C L + NL A + D L LAV LD ++D Sbjct: 487 ETAVCNLGSVNLAAHLQWSDGTTGVRPTDPAARATGIDTDRLRSTVRLAVTYLDRVIDIN 546 Query: 497 DYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASN 556 YP A R +G+G + + A L+ + E IQ L+ S Sbjct: 547 YYPSEQAAASNPRWRPIGLGSMGLQDVFFALRMPFDAPEAKELSTRIAEEIQLSALERSA 606 Query: 557 ELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYD-WEALRESIKTHGLRNST 615 ELA++ GA P F ET A+G L + DL + EP + W A+R+ I HGLRNS Sbjct: 607 ELAEQFGAHPAFAETRAARGQL-----QHDLQGV--EPTQTERWAAVRQRIADHGLRNSL 659 Query: 616 LSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQV-------------------- 655 + A+ P+ T + I+ IEP + + + G QV Sbjct: 660 MIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGEFMQVNTALVGELKSLGLWTEAVRE 719 Query: 656 -----------VPDY-EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSR 703 + D E + WE+P +++ Q ++DQS S N + Sbjct: 720 KLKADNGSVAGIADLPEETRRLFRTAWELP-QKALIEMAAARQAYVDQSQSLNLFMESPN 778 Query: 704 FPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTR 735 + +L L A+K G+KT YY +R Sbjct: 779 -------IGKLSSMYLYAWKAGLKTTYYLRSR 803 >UniRef50_Q9QAL9 Ribonucleoside-diphosphate reductase n=2 Tax=Shrimp white spot syndrome virus RepID=Q9QAL9_WSSV Length = 848 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 211/813 (25%), Positives = 346/813 (42%), Gaps = 104/813 (12%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAA-------EGLHNVSISQVELRSHI--QFYDGI 53 Q ++KR+G+ + I+L+KI + ++ A L +I+ EL SHI + I Sbjct: 6 QQSFISKRNGTKQEISLEKIIKRIENACLPVNQYVPKLDKNAINPQELASHIMDRLPATI 65 Query: 54 KTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRK--KAYGQFEPPALYDHVVKMVE 111 ++ + + A I D PD+ LA R ++ K K + F Sbjct: 66 SFQEMDDFLADYAKTKIV-DHPDFGKLAGRFICSNIHKNTKEWNSFSATTQKLRHAIHPG 124 Query: 112 MGKYDNHLLEDYTEEEFKQ---MDTFIDHDRDMTFSYAAVKQLEGKYLVQ-----NRVTG 163 GK + + + Y E +D ID+ D F+ ++ LE YL++ +R Sbjct: 125 TGKPASVVNDTYYENVMANAEILDAVIDYKMDYLFTCFGLRTLEYSYLIKIGSPTDRKKR 184 Query: 164 EIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFS 223 + E Q + + VA + + ++ V YD +S + +P + T T Q S Sbjct: 185 ILVERPQDMIMRVAVGIHG-----SDIKSVIETYDLMSRHYFTHASPTLFNCGTVTPQLS 239 Query: 224 SCVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFY 282 SC L+ DS++ I T G+GI+ +RA GSPI H G + F Sbjct: 240 SCFLLGLQDDSIEGIYDTLKEAAIISKTAGGLGIHFHDLRAKGSPISSWSGTHPGLMAFL 299 Query: 283 KHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINK 341 + F +VK SQGG R GAA ++ WHL+V+ + + N G E R R + + ++ Sbjct: 300 QIFNVSVKKVSQGGDKRRGAAAIYISDWHLDVKDFIDCRKNAGNEDLRTRDLFPAIWVSD 359 Query: 342 LMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSL 401 L R+ G++ +L P + PGL D EEF+ LY KYE + K+ VKA LF Sbjct: 360 LFMERVKAGKNWSLMCPHECPGLSD---VHGEEFKALYEKYEAEGK-GKEVVKARALFDQ 415 Query: 402 MMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIAL 461 + R TG Y+ D N S + + ++ SNLC EI + ++ E A+ Sbjct: 416 INSARIETGTPYVCFKDTINRKSNQE-NVGIIKSSNLCTEIVQYS--------DSEETAV 466 Query: 462 CTLSAFNLGAINNL---------------DELEELAILAVRALDALLDYQDYPIPAAKRG 506 C L++ A+N E++ + + R LD ++D Y + + Sbjct: 467 CNLASI---AVNKFVKYSPIPSLRPYVDYREMKRVVKIMTRNLDKVIDVNFYAVDKTRIS 523 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGAC- 565 M R +G+GV A K + A + + FE I Y L+AS E+AKE+G Sbjct: 524 NMKTRPMGLGVQGLADLFFKLRIPFESEEAALINKRIFETIYYGALEASCEIAKEKGETY 583 Query: 566 PWFNETTYAKGILPIDTYK---KDLDTIANE-PLHYDWEALRESIKTHGLRNSTLSALMP 621 F + +KGI D K K+ D N P+H DWE LR I +G+ NS A MP Sbjct: 584 ELFEGSPLSKGIFQFDMGKENIKNRDIYFNSLPIH-DWEQLRRDIMKYGVHNSMFVAPMP 642 Query: 622 SETSSQISNATNGIEPPRGYV--------SIKASKDGILR-------------------- 653 + +++QI + EP + S + + ++R Sbjct: 643 TASTAQILGNSESFEPLTSNMYNRNVLSGSFQVVNEYVIRELIKLGEWNSVTKQRIMASG 702 Query: 654 ---QVVPDY-EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKV 709 Q +P+ + + ++ +WE+ L + F+DQ+ S N + Sbjct: 703 GSIQTLPNIPKSTKELFKTVWEI-NPRTTLDMAIQRGMFVDQAQSLNLFVEEPE------ 755 Query: 710 PMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQ 742 + ++ + A++ G+KTLYY T+ A Q Sbjct: 756 -LSKVRSMTMYAWEKGIKTLYYLRTKGAARAVQ 787 >UniRef50_B7KJK7 Ribonucleoside-diphosphate reductase n=4 Tax=Cyanobacteria RepID=B7KJK7_CYAP7 Length = 1123 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 145/496 (29%), Positives = 236/496 (47%), Gaps = 47/496 (9%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAA 66 V KRDGS +N+ KI V++WA G +V+ +E + +GI T +I + +I A Sbjct: 39 VVKRDGSKAALNIAKIREVVEWACVG-KDVNPIALEAGLTTRLRNGITTREIQDNLINCA 97 Query: 67 ADLISRDAPDYQYLAARLAIFHLRKKA-------YGQFEPPALYDHVVKM-VEMGKYDNH 118 ++ S + PD++Y+A RL I+ L K YG YD VK ++ +YD Sbjct: 98 LEMCSPEEPDWRYVAGRLHIWSLWKDTLANRGYQYGN------YDQTVKTKIDHNQYDRR 151 Query: 119 LLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 +L Y+ EE ++ T+I+ D D + YA L +YL+ + + E + L V Sbjct: 152 ILV-YSSEELQEAGTWINSDWDTDYDYAGAVLLTSRYLLPDELPQEALLTCALLLASVET 210 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSIN 238 E RL++ ++FY+A++ +ISL TPI++ +R P +SC + D+L+SI Sbjct: 211 -------PENRLKWARKFYEAIAKRQISLATPILANLRVPNGSLTSCFISAIDDNLESIF 263 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVR 298 + + K G+GIN RIRA GS + G IP+ K + +QGG R Sbjct: 264 SEVTNTAKISKNGGGVGINVSRIRATGSWVMNKPNASGGVIPWIKILNDTAIAVNQGGRR 323 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 GA T+ +WHL+V L ++ G + + + + + R++ ++ TL P Sbjct: 324 AGAVTISLDIWHLDVPEFLEMQTENGDQRRKAYDIFPQLVMADEFMRRVIHKQEWTLVDP 383 Query: 359 SDVPGLYDAFFAD--QEEFERLYTKYE----KDDSIRKQRVKAVELFSLMMQERASTGRI 412 ++ + A+ EEFE++Y+K E + +RV A ELF +M+ + TG Sbjct: 384 YEIRTKFGVELAELWGEEFEQVYSKIETAIHNGEITLYKRVNARELFKHIMRSQLETGMP 443 Query: 413 YIQ-----NVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAF 467 Y+ N + N H + P + NLC +A TK L D G+I + L Sbjct: 444 YLAFKDTINRANPNKHEGYIPGV------NLC--VAGETKILTD----RGQIPIADLVGE 491 Query: 468 NLGAINNLDELEELAI 483 + I N E E+ I Sbjct: 492 KVN-IWNGSEWSEVLI 506 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 92/323 (28%), Positives = 152/323 (47%), Gaps = 52/323 (16%) Query: 458 EIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGV 517 E C L + NL ++N D LE+ +AVR LD +D P AAK RT+G+G Sbjct: 830 ESHCCNLVSLNLANLDNSD-LEDTCKIAVRLLDNTIDLTHPPFEAAKNHNNLYRTIGVGC 888 Query: 518 INFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGI 577 + A +LAK +R S +++H FE I Y+ +S EL++E+GA F + +++G Sbjct: 889 MGLADWLAK--RRLSYEHLTDISH-LFEEIGYWCTLSSMELSQERGAYACFPGSDWSQGK 945 Query: 578 L----PIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATN 633 L P++ + ++ A+ P W L E I+ +G+RNS ++A+ P+ +SS + T Sbjct: 946 LIGSKPVEWFIEN----AHHPER--WAKLAEDIQLYGIRNSHITAIAPNTSSSLVQGCTA 999 Query: 634 GIEPPRG-YVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGY-----LQLVGIMQK 687 + P + K +K + + P + E W P N Y ++ + +MQ+ Sbjct: 1000 SVLPVYSRFFYDKWAKGAV--PIAPPF-----IKESFWFYPENKTYDQNKVVKAIAVMQQ 1052 Query: 688 FIDQSISANTNY----------DPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNT--R 735 +ID IS + DP RF K + L+ A++ G K +YY T + Sbjct: 1053 WIDTGISMELLFNLNQGVYFPEDPERFLKAK----DIYDTLILAWREGCKAVYYIRTVQK 1108 Query: 736 DGAEDAQDDLVPSIQDDGCESGA 758 D +D+ D+ C S A Sbjct: 1109 DNFKDS---------DNSCSSCA 1122 >UniRef50_B2V806 Ribonucleoside-diphosphate reductase n=2 Tax=Aquificales RepID=B2V806_SULSY Length = 850 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 202/817 (24%), Positives = 358/817 (43%), Gaps = 139/817 (17%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVS----ISQVELRSHIQFYDGIKTSD 57 ++N +V KRDG+ E+ + K+ + EGL + ++ ++ + + T + Sbjct: 4 HKNRIVVKRDGTQEKFQMKKLVDAIFALLEGLDLPDDYEIVFKITKELDLKIPEVVTTEE 63 Query: 58 IHETIIKAAADLISRDAPDYQYLAAR--LAIFHLR-KKAYGQFEPPALYDHVVKMV--EM 112 + ++KA LI + Y +A R L I + R ++ + F+ Y K++ E+ Sbjct: 64 LDYLVLKAIEHLIPTGSI-YDTIATRQLLKIINRRIERRFSSFKDYINYAVNEKLLKPEL 122 Query: 113 GKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFL 172 +D LLE + ID+ RD Y + L+ +YL ++R E E Q+ Sbjct: 123 LNFDIDLLE-----------SKIDYSRDNNLDYFGLSTLKDRYLTKDR-NFETIEKPQWF 170 Query: 173 YILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGD 232 ++ VA + N E + + YD +S + TP + T T Q+SSC + D Sbjct: 171 FMRVAMGI-GNTEEE-----ILKIYDKLSNLEYLHSTPTLFNSGTLTNQYSSCYVNVVDD 224 Query: 233 SLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSC 292 SL+SI + G+G + RIRA GS I A +G IPF K F T V + Sbjct: 225 SLESIMDKAKETAFLAKYAGGVGTDITRIRATGSKIHSLNAKSSGIIPFIKIFDTIVNAI 284 Query: 293 SQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGED 352 QGG R + ++ WHL+VE+ L L+ G R ++ + + + R+ +GE Sbjct: 285 QQGGRRRSSQVMYLQPWHLDVEAFLDLRETTGNPYFRTPSLNTALWMPDEIMRRIKEGEP 344 Query: 353 ITLFSPSDVPGLYDAFFADQEEFERLYT----KYEKDDSIRKQRVKAVELFSLMMQERAS 408 I LF P++ L ++ EEF + Y K E+ + +++ + + + + + A Sbjct: 345 IYLFDPAECRELVTSY---GEEFAKKYQECIEKAERGELELWKKIDSRDFYKKYLFKLAK 401 Query: 409 TGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFN 468 TG ++ D N H+P P + + SNLC EI++P P + A+CTL++ N Sbjct: 402 TGHPWLTFKDAHNRHNPC-PKYSVINSSNLCTEISIPNSPQS--------TAVCTLASVN 452 Query: 469 LG------------------AIN----------------NLDELEELAILAVRALDALLD 494 L + N + D+L++ V ALD +LD Sbjct: 453 LARHLKKVERETSDVKREELSPNEKNTSHLLTYSPTHSIDWDKLKDTLETMVVALDNILD 512 Query: 495 YQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKA 554 YP +++ M R +GIG++ F L G Y A L + + ++ + + Sbjct: 513 KNFYPSEESRKNTMDLRPIGIGLMGFHEALIYLGIPYDSDEAIELAKEIAKFMRETVYRK 572 Query: 555 SNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGL--- 611 S ELAKE+GA P + E + K++ + + +E L+ + E TH L Sbjct: 573 SEELAKERGAFPHYYEVS-----------KRESEKVKSEELNPN-----EKTPTHLLTYS 616 Query: 612 ----------RNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV----P 657 RN+ L A+ P+ + S I+ ++ I+ Y S S+D + + + P Sbjct: 617 PTHPYNYPPRRNAVLLAIAPTASISIIAGTSSSID---NYFSNIFSRDTLSGKFIVVNKP 673 Query: 658 DYEHLHDA----YELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQ 713 + L + E+L ++ N G +Q + ++ +D+ + T Y+ S P +Q Sbjct: 674 LMKMLEEKGIWNEEMLEKIKANQGSIQYIDELEGVVDKRL-FKTAYEVS-------PYRQ 725 Query: 714 LLKDLLTAYKFGV-----KTLYYQNTRDGAEDAQDDL 745 + D+ A++ + K+LY + ED +DD+ Sbjct: 726 I--DIAAAFQQYIDQAVSKSLYIE------EDLRDDM 754 >UniRef50_P0A5W9 Ribonucleoside-diphosphate reductase subunit alpha n=348 Tax=Bacteria RepID=RIR1_MYCBO Length = 725 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 151/561 (26%), Positives = 254/561 (45%), Gaps = 42/561 (7%) Query: 203 FKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR 262 F+ + PT + SG + S C L+ D+++SI + ++ ++ + G+ + IR Sbjct: 168 FQPATPTFLNSGKKQRGEPVS-CFLLRVEDNMESIGRSINSALQLSKRGGGVALLLTNIR 226 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 G+PI+ E +G IP K + A +Q G R GA ++ H ++ L K Sbjct: 227 EHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHAHHPDIYRFLDTKRE 286 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 E R++ + GV I + + + +D+ LFSP DV +Y FAD E+ Y Sbjct: 287 NADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVPFADISVTEKYYEMV 346 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLC--- 439 + D IRK ++KA E F + + + +G YI D N +P D I SNLC Sbjct: 347 D-DARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGKIT---HSNLCSEI 402 Query: 440 LEIALPTKPLNDVN-DENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDY 498 L+++ P+ D++ + G+ C L + N+ + + + +A+RAL A+ D Sbjct: 403 LQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRALTAVSDQTHI 462 Query: 499 -PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNE 557 +P+ ++G +G+G +N YLA+ Y + T+ F + Y+ L+ASN Sbjct: 463 KSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTVLYHALRASNR 522 Query: 558 LAKEQGA-CPWFNETTYAKGILPIDTYKKDL-------------DTIANEPLHYDWEALR 603 +A E+G F + YA G D Y + D P DW L+ Sbjct: 523 IAIERGTHFKGFERSKYASGEF-FDKYTDQIWEPKTQKVRQLFADAGIRIPTQDDWRRLK 581 Query: 604 ESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSI-KASKDGILRQVVP----- 657 ES++ HG+ N L A+ P+ + S I+++T+ I P V I K K G + P Sbjct: 582 ESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVYYPAPYMTND 641 Query: 658 DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKD 717 + E+ DAYE+ G + + + +DQ +S + F + + K Sbjct: 642 NLEYYEDAYEI-----GYEKIIDTYAAATQHVDQGLSL------TLFFKDTATTRDVNKA 690 Query: 718 LLTAYKFGVKTLYYQNTRDGA 738 + A++ G+KTLYY R A Sbjct: 691 QIYAWRKGIKTLYYIRLRQMA 711 >UniRef50_B7SW23 Ribonucleoside-diphosphate reductase n=1 Tax=Spodoptera litura nucleopolyhedrovirus II RepID=B7SW23_9ABAC Length = 904 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 172/665 (25%), Positives = 270/665 (40%), Gaps = 84/665 (12%) Query: 76 DYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFI 135 DY LA R+ + L K F V + +H + + ++ I Sbjct: 210 DYALLAGRILVEDLHNKVCPCFV------EVTNYLAQNNVVSHEFNNLVVKHGALLNREI 263 Query: 136 DHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKR 195 H+RD + Y K L YL+ +V I E Q + + VA + + Y Sbjct: 264 KHNRDYDYKYFGFKTLTNGYLL--KVNDVIAERPQHMLMRVALAIHGDDVMSAIETYQLM 321 Query: 196 FYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC--GDSLDSINAT--SSAIVKYVSQR 251 ++ TF + PT +G P Q SC L +C DS+D I T SA++ + Sbjct: 322 ---SLGTFTHASPTLFAAGTCRP--QMCSCFL-QCIKEDSIDGIYKTLHESALISNLGGG 375 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 G+ + + + G+ GG + + F V+ QGG R GA + WH Sbjct: 376 LGLSVQSVSAQYNGTTKSGG------LVSMLRVFNNMVRHVDQGGKRKGALAAYVEPWHP 429 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFAD 371 E+ +L L+ N G E + R + G+ I L R+ + ++ +LF P PGL D + + Sbjct: 430 EIYDVLNLRRNMGSEDAKARDLMLGLWIPDLFMERVKENKEWSLFCPKKYPGLLDEYGS- 488 Query: 372 QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIA 431 FE LY KYEK + + +++VKA +LF +++ TG Y+ D CN S + Sbjct: 489 --SFEILYEKYEK-NKLYERQVKARDLFRFIVETNVETGGPYMLYKDPCNKFSN-QKNLG 544 Query: 432 PVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDE-------LEELAIL 484 ++ SNLC EI + E A+C L++ + N+ L L + Sbjct: 545 IIKCSNLCAEIVQYC--------DKDETAVCNLASIAVNKCVNVKTKTFDYVLLNRLTKI 596 Query: 485 AVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTF 544 VR L+ ++D YP A R +G+G+ A Y A ++ + Sbjct: 597 VVRNLNKIIDSNHYPTAGAANSNKKHRPVGVGIQGLADAFVLLDIPYDSEEARSVNYMIA 656 Query: 545 EAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRE 604 E I + L+AS ELAK G + + +G + D Y I ++W LRE Sbjct: 657 ETIYFSALEASCELAKIDGPYESYENSPLFRGTMHYDNY-----NIYPTDHLWNWSKLRE 711 Query: 605 SIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY----- 659 I+ HG+RNS L A MP+ T++QI EP V ++ G QVV Y Sbjct: 712 KIQRHGVRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAGEF-QVVNQYLIKAL 770 Query: 660 ----------------------------EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQ 691 +H+ D ++ WE+ + + FIDQ Sbjct: 771 VDLNIYTPELRNKILAENGSVQNIDEIPQHVKDLFKTAWEIKSK-CMIDMAADRAPFIDQ 829 Query: 692 SISAN 696 S S N Sbjct: 830 SQSLN 834 >UniRef50_D2BQ84 Ribonucleoside-diphosphate reductase n=32 Tax=Lactobacillales RepID=D2BQ84_LACLK Length = 722 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 157/569 (27%), Positives = 261/569 (45%), Gaps = 52/569 (9%) Query: 203 FKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR 262 ++ + PT + +G R +F SC L++ D ++SI T ++ ++ G+G+N +R Sbjct: 151 YQPATPTFLNAG-RKRRGEFVSCFLLQLTDDMNSIGRTINSALQLSKNGGGVGLNLTNLR 209 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 A G+PI+G + G +P K F+ A +Q G R GA ++ ++H ++ L K Sbjct: 210 AAGAPIKGYDGVAAGVVPVMKLFEDAFSYANQLGQRQGAGVVYLSLFHPDIMEFLSTKKE 269 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 E RV+ + GV + Y + KGE + LF P V Y FA+ + Y K Sbjct: 270 NADEKIRVKTLSLGVTVPDKFYELVKKGETMYLFEPYFVEKYYGKPFAEV-DITAEYDKM 328 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEI 442 + IRK + + EL + + + +G YI NVD N +P D I+ SNLC EI Sbjct: 329 VANPEIRKTPINSRELEQELSKLQQESGYPYIVNVDTVNQANPVDGVIS---MSNLCSEI 385 Query: 443 ALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE-----LAILA-VRALDALLDYQ 496 P + +ND+ + T A NLG+ N L+ + +I A VRAL + + Sbjct: 386 LQVQTP-SVLNDDQTYKVVGTDVACNLGSTNVLNMMTSSNEFGTSIEAMVRALTFISETS 444 Query: 497 DY-PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKAS 555 + +P ++G +G+G + +LA++ Y A T F + YY L AS Sbjct: 445 NLDTVPTVRKGNDEMHAIGLGAMGLHSFLAQNQIHYDSKEAVEFTSVYFMLLNYYTLVAS 504 Query: 556 NELAKEQGAC-PWFNETTYAKG-----------ILPIDTYKKDLDTIANEPLHYDWEALR 603 N+LA E+G+ F ++ YA G + + ++L P DW ALR Sbjct: 505 NKLAVEKGSSFKNFEKSAYADGSYFDKYLTHDYFAAVSSKVQELFKGIAVPTIEDWTALR 564 Query: 604 ESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD---------GILRQ 654 +++KT GL NS A+ P+ + S I++ ++ I P + + K G+ + Sbjct: 565 DTVKTSGLYNSYRMAVAPNGSISYINDCSSSIHPIVNRIEERQEKKVGKIYYPAAGLATE 624 Query: 655 VVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSG----KVP 710 +P Y+ +D +M + + + +DQ +S T + S P G KV Sbjct: 625 TIPYYKSAYDT-----DM---RAVIDVYAAATEHVDQGLSL-TLFMRSTLPEGLYEWKVA 675 Query: 711 MQQLLKDLLT-----AYKFGVKTLYYQNT 734 ++ L+ AYK G+KT+YY T Sbjct: 676 NNKMTTRDLSILRNYAYKKGIKTIYYIRT 704 >UniRef50_C5WF13 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C5WF13_STRDG Length = 728 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 183/705 (25%), Positives = 316/705 (44%), Gaps = 68/705 (9%) Query: 100 PALYDHVVKMVEMGKYDNHLLEDYTEEEFK-------QMD-TFIDHDRDMTF--SYAAVK 149 P+L + + +++ G Y+ + + Y ++ K Q D F++ M F SYA +K Sbjct: 49 PSLEEKLAYLIKEGYYEQAIFDLYPDDVIKEAFQYAYQQDYRFLNLMGAMKFYQSYA-LK 107 Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPT 209 L+GKY ++ V + +A FL LF+ + +RF A TF Sbjct: 108 TLDGKYYLET-VEDRVVMNALFLANGDQTLLFN----LIKDMLHRRFQPATPTF------ 156 Query: 210 PIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIR 269 ++ + ++ SC L+ D+++SI+ ++ + G+ + +R +G+PI+ Sbjct: 157 --LNAGKKRRGEYISCYLLRIEDNMESISRAIGTSLQLSKRGGGVALCLTNLREIGAPIK 214 Query: 270 GGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNR 329 E TG +P K + + +Q G R GA ++ H EV + L K E R Sbjct: 215 EIENQATGIVPVMKLLEDSFSYANQLGQRQGAGAVYLHAHHPEVLTFLDTKRENADEKIR 274 Query: 330 VRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIR 389 ++ + G+ I + + + +++ LFSP D+ +Y +D E Y K + +I+ Sbjct: 275 IKSLALGLVIPDITFQLAKENKEMALFSPYDIKRVYGKDMSDISITEE-YNKLLANPAIK 333 Query: 390 KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPL 449 K + A +LF L+ + +G Y+ D N +P + SNLC EIA + Sbjct: 334 KTYISARKLFQLIAELHFESGYPYLLFDDTVNQRNPHAQK-GRIVMSNLCSEIAQVSTES 392 Query: 450 NDVND----ENGEIALCTLSAFNLG-AINNLDELEELAILAVRALDALLDYQDYPI-PAA 503 +D + GE C L + N+ A+ + +L ++RALD + D P+ Sbjct: 393 TYNDDLSFKDIGEDICCNLGSINIAEAMTDAKHFSQLITTSIRALDQVSRASDLSCAPSI 452 Query: 504 KRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG 563 ++G +G+G +N +LA + Y A + T F + Y+ KAS +LAKE+G Sbjct: 453 EKGNAANHAVGLGAMNLHGFLATNHLYYDSEEAVDFTDLFFHTMAYHAFKASCQLAKEKG 512 Query: 564 ACPWFNETTYAKGI----LPIDTYKKDLDTIA--------NEPLHYDWEALRESIKTHGL 611 A F +TYA G I+ K IA P DW+AL I+T+GL Sbjct: 513 AFADFERSTYADGSYFKQYVIEDAKPKTKRIAALLKSYGFQLPTVADWKALVRDIQTYGL 572 Query: 612 RNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGIL-RQVVPDYEHLHDAYELL- 669 N+ L A+ P+ + S +S+ T ++P V ++ K+G L R VP Y+ + Y Sbjct: 573 ANAHLLAVAPTGSISYLSSCTPSLQPVVAPVEVR--KEGNLGRIYVPAYQINQENYAYYE 630 Query: 670 ---WEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGV 726 +EM G + +++V QK +DQ+IS + F + + + L + + A+K Sbjct: 631 RGAYEM-GPEPIIKIVAAAQKHVDQAISL------TLFMTDQATTRDLNRSYIQAFKLKC 683 Query: 727 KTLYYQNTRDGA--------EDAQDDLVPS--IQDDGCESGACKI 761 ++YY R ED+Q D V + D E +C I Sbjct: 684 ASIYYVRVRQEVLAGSEQYDEDSQLDSVDKNGLTDTINECQSCMI 728 >UniRef50_P78027 Ribonucleoside-diphosphate reductase subunit alpha n=50 Tax=Bacteria RepID=RIR1_MYCPN Length = 721 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 184/690 (26%), Positives = 311/690 (45%), Gaps = 69/690 (10%) Query: 109 MVEMGKYDNHLLEDYTEEEFKQM--DTFIDHDRDMTFSYA-------AVKQLEGKYLVQN 159 +V+ YD +++ Y+ E+F+++ + R F A A+K +GK+ ++N Sbjct: 64 LVKNDYYDENIINMYSFEQFEEITRKAYAYRFRYANFMGAFKFYNAYALKTFDGKWYLEN 123 Query: 160 RVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPT 219 YE + +L A NY + +L +K+ + F+ + PT + +G R Sbjct: 124 ------YEDRVVMNVLFLAN--GNYNKALKL--LKQI--ITNRFQPATPTFLNAG-RKKR 170 Query: 220 RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCI 279 +F SC L+ D+++SI + ++ + G+ + IR G+PI+ E +G I Sbjct: 171 GEFVSCYLLRIEDNMESIGRAITTTLQLSKRDGGVALLLTNIRESGAPIKKIENQSSGII 230 Query: 280 PFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQI 339 P K + + +Q G R GA ++ H +V L K E R++ + G+ I Sbjct: 231 PIMKLLEDSFSYANQLGQRQGAGAVYLHAHHPDVMQFLDTKRENADEKIRIKSLSLGLVI 290 Query: 340 NKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELF 399 + +T E++ LFSP DV Y +D E +Y + + I+K + A + F Sbjct: 291 PDITFTLAKNNEEMALFSPYDVYEEYGKPLSDISVTE-MYYELLANQRIKKTFINARKFF 349 Query: 400 SLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND----E 455 + + +G YI D N + I SNLC EI P+ P +D + Sbjct: 350 QTVAELHFESGYPYILFDDTVNRRNAHPNRIV---MSNLCSEIVQPSTPSEFHHDLAFKK 406 Query: 456 NGEIALCTLSAFNLG-AINNLDELEELAILAVRALDALLDYQDYPI-PAAKRGAMGRRTL 513 G C L + N+ A+ + E EL LA+ +LD + + P+ ++G L Sbjct: 407 VGNDISCNLGSLNIAKAMESGPEFSELVKLAIESLDLVSRVSNLETAPSIQKGNSENHAL 466 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTY 573 G+G +N +LA + Y+ A + T+ F + Y+ KAS+ELA E+G F T + Sbjct: 467 GLGAMNLHGFLATNQIYYNSPEAIDFTNIFFYTVAYHAFKASSELALEKGKFKNFENTKF 526 Query: 574 AKGILPIDTYKK---DLDTIANE-------------PLHYDWEALRESIKTHGLRNSTLS 617 A G D Y K D T E P +W+ L +I+ +GL NS L Sbjct: 527 ADGSY-FDKYIKVEPDFWTPKTERVKALFQKYQVEIPTRENWKELALNIQKNGLANSHLL 585 Query: 618 ALMPSETSSQISNATNGIEPPRGYVSIKASKDGIL-RQVVPDYEHLHDAYELL----WEM 672 A+ P+ + S +S+ T ++P V ++ K+G L R VP Y+ D+Y +E+ Sbjct: 586 AIAPTGSISYLSSCTPSLQPVVSPVEVR--KEGRLGRIYVPAYQLNKDSYPFYKDGAYEL 643 Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQ 732 G + + + Q+ +DQ+IS + F + K + L K + A+K G ++YY Sbjct: 644 -GPEPIINIAAAAQQHVDQAISL------TLFMTDKATTRDLNKAYIYAFKKGCSSIYYV 696 Query: 733 NTRDGA-EDAQDDLVPSIQDDGCESGACKI 761 R ED++D +IQ CE AC I Sbjct: 697 RVRQEVLEDSEDH---TIQMQQCE--ACVI 721 >UniRef50_C4V8X4 Ribonucleoside-diphosphate reductase n=1 Tax=Nosema ceranae BRL01 RepID=C4V8X4_NOSCE Length = 800 Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 177/723 (24%), Positives = 315/723 (43%), Gaps = 88/723 (12%) Query: 58 IHETIIKAA--ADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKY 115 + E I AA AD ++ DY +A++ + +L++ F A D++ K G + Sbjct: 77 VEEFISFAAETADSMTTKHYDYGRFSAKILMEYLKENTLDSF--FAKVDYIYKN---GDF 131 Query: 116 DNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYIL 175 + + + K +D +D+ +D +++Y A+ L+ YL+ + G+ E Q + + Sbjct: 132 YSEKFYNIVLDNKKFLDELVDYSKDDSWTYFAILTLKRAYLLT--LDGQTIERPQDMLLR 189 Query: 176 VAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE-CGDSL 234 VA L + L+ VK Y+ +S + +P + + Q +SC L+ +++ Sbjct: 190 VAVQLHGD-----NLENVKETYELLSNNMYTHGSPTIFNSGSKKSQLASCFLLTPIEETV 244 Query: 235 DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQ 294 + + T V+ G+ ++ + A G+ IR G IP+ + ++K Q Sbjct: 245 EGLFETVKRCVQISKSGGGVALDLHDMAAKGTSIRKTGGISKGIIPYIQVLNWSLKYIGQ 304 Query: 295 GGVR-GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDI 353 G R G ++ WH ++ L L+ + G + R R + G+ IN L R+ ED Sbjct: 305 AGSRRSGCPAIYLEPWHKDIFDFLDLRKSIGKDELRARDVFTGMWINDLFMKRVEANEDW 364 Query: 354 TLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIY 413 +LF P VPGL +A+ +EFE +Y +YEK + V A +++ +++ + TG Y Sbjct: 365 SLFCPKSVPGLSNAY---GKEFEDMYLEYEK--KVDCVVVPAQKVWKAIIESQIETGTPY 419 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG--A 471 + D N S I +R SNLC EI T P E+A+C L++ L Sbjct: 420 MLYKDTINNLSN-QKNIGTIRCSNLCTEIVQYTSP--------DEVAVCNLASICLPKFV 470 Query: 472 IN---NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHG 528 IN + + + + + + + ++D YP+ A++ R +G+GV A Sbjct: 471 INGEFDFNLFKSVVKIVTKNANIVIDCNFYPLKEAEKSNKKHRPIGLGVQGLADVFLMLR 530 Query: 529 KRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLD 588 Y A L + FE + + L++S E A++ G +N + +KGI + Sbjct: 531 LPYESEGARKLNKEIFETLYFGALESSCEEAEKYGPYESYNGSPISKGIFHWE------- 583 Query: 589 TIANEPL--HYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKA 646 +AN ++WE LR+ I +G+RNS L A MP+ +SQI N EP + + Sbjct: 584 -MANSSTTGRWNWEELRKKILKYGVRNSLLIAPMPTAGTSQIFNNNEAFEPFTSNIYTRR 642 Query: 647 SKDGILRQV-----------------VPDY---------------EHLHDAYELLWEMPG 674 + G + V + +Y E + + Y+ +WE+ Sbjct: 643 TACGEFQMVNRYLMNDLIKLNMWSPEIKNYIVEQEGSIQNISGIPEEIKELYKTVWEIKM 702 Query: 675 NDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDL-LTAYKFGVKT-LYYQ 732 + L Q F+DQ+ S N +P +L + +K G+KT +YY Sbjct: 703 K-CVIDLAADRQAFVDQTQSLNLFVAKPTYP--------ILSSMHFYGWKRGLKTGMYYL 753 Query: 733 NTR 735 TR Sbjct: 754 RTR 756 >UniRef50_B8HJ14 Ribonucleoside-diphosphate reductase n=158 Tax=root RepID=B8HJ14_ARTCA Length = 726 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 150/564 (26%), Positives = 256/564 (45%), Gaps = 46/564 (8%) Query: 203 FKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR 262 F+ + PT + SG + + SC L+ D+++SI+ ++ ++ + G+ +R Sbjct: 167 FQPATPTFLNSG-KAQRGELVSCFLLRIEDNMESISRAINSALQLSKRGGGVAFALTNVR 225 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 G+PI+ E +G IP K + + +Q G R GA ++ H ++ L K Sbjct: 226 ETGAPIKQIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHAHHPDIYRFLDTKRE 285 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 E R++ + GV I + + K ED+ LFSP DV +Y F+D E+ Y Sbjct: 286 NADEKIRIKTLSLGVVIPDITFELAKKDEDMYLFSPYDVEKVYGMPFSDINVTEKYYEMV 345 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLC--- 439 + D I+K ++KA E F + + + +G YI D N +P + I SNLC Sbjct: 346 D-DARIKKTKIKAREFFQTLAEIQFESGYPYIMFEDTVNRANPIEGKII---MSNLCSEI 401 Query: 440 LEIALPTKPLNDVN---DENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQ 496 L+++ PT ++N D G+ C L + N+ + +L +A+RAL A+ D Sbjct: 402 LQVSTPTTYNENLNYEVDGIGKDISCNLGSMNIAKAMDGGDLGATVEIAIRALTAVSDQS 461 Query: 497 DY-PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKAS 555 + + + RG +G+G +N +LA+ Y + + K A+ ++ ++AS Sbjct: 462 NITAVESVARGNRMSHAIGLGQMNLHGFLAREHVYYGSPESIDFFGKYMAAVAFHAIRAS 521 Query: 556 NELAKEQGAC-PWFNETTYAKG----------ILPIDTYKKDLDTI--ANEPLHYDWEAL 602 N +AKE+G F + YA G LP ++L P DWE L Sbjct: 522 NLIAKERGVTFDGFERSKYASGEFFDKYVTRSWLPTTERGQELFAKFGITLPTIADWEEL 581 Query: 603 RESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG-ILRQVVP---- 657 + S+ HG+ N L A+ P+ + S I+N+T I P + I+ K+G I R P Sbjct: 582 KASVMEHGIYNQNLQAVPPTGSISYINNSTASIHPIAAKIEIR--KEGKIGRTYFPAPYL 639 Query: 658 ---DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL 714 + E+ DAYE+ G + + + + +DQ +S + F + + Sbjct: 640 TNENLEYYQDAYEI-----GYEKIVDMYAAATEHVDQGLSL------TLFFKDTATTRDI 688 Query: 715 LKDLLTAYKFGVKTLYYQNTRDGA 738 K + A+K G+KT+YY R A Sbjct: 689 NKAQIYAWKKGIKTIYYIRLRQMA 712 >UniRef50_Q6R7H4 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Ostreid herpesvirus 1 RepID=RIR1_OSHV1 Length = 835 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 185/746 (24%), Positives = 327/746 (43%), Gaps = 118/746 (15%) Query: 75 PDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEM----------------GKYDNH 118 PDY +LA R++ + Q P + V ++M G + Sbjct: 82 PDYAFLAGRVSAYMT------QINTPKTFTDAVYGIQMAVGETNGFRSPMKPVKGGLSDE 135 Query: 119 LLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 ++ D+ E ++D ID RD + +Y + L + +V ++YE Q++++ VA Sbjct: 136 IV-DFVNEHGARLDGMIDDVRDYSHNYMGITGLLNGVAI--KVNKKLYERPQYVFMRVAM 192 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSIN 238 + ++ ET L+ + + Y +S +S+ +P++ T + +SC L++ GD++ SI Sbjct: 193 AM-TDLSSETALEDIWQTYMLISGQCLSMASPVLFNGGTSSSNTASCFLLDMGDNMVSIT 251 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQG-GV 297 + + +++ GIGIN ++RA GS I G +G F +S QG Sbjct: 252 KKVAQTMTLIAKNGGIGINFSKLRATGSKI-GMAGKSSGIGGKLNLFDRVAQSVDQGENK 310 Query: 298 RGGAATLFYPMWHLEVESLLVLK-NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLF 356 R GA + WH ++ L + + G E N+ ++ G+ ++ L R+ ++ +LF Sbjct: 311 RPGAIAGYLTDWHADMYDWLYSRYSGSGNEVNKRHVLNMGLVMSDLFMERVENDKEWSLF 370 Query: 357 SPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQN 416 SP+DV GL + + E+F R Y +E + I++ V A +LFS + STG YI Sbjct: 371 SPNDVVGLEELY---GEKFVRAYRAHEANPKIKRTTVSARKLFSDIANMMWSTGEPYILF 427 Query: 417 VDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLD 476 D N S + ++ SNLC EI D N EIA+C L+ + N++ Sbjct: 428 KDAVNERSNH-KHLGTIKNSNLCCEIV----QYCDTN----EIAVCNLATICVSNFVNVE 478 Query: 477 ELE-------ELAILAVRALDALLDYQDYPIP-------AAKR----------------- 505 E + A +A + ++ L+D Q+Y + A +R Sbjct: 479 TGEIDFEGIADAAGVACKGINNLIDKQNYDLGNEQLMRLADERTEEVVEVNGIKFDAKYN 538 Query: 506 ----GAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 + R GIG+ K Y A L EAI Y ++ S ++A+E Sbjct: 539 LVSYSNLKHRPQGIGMQGLHDVFMKLKIPYDSEMAFRLAALIQEAIYYGAVRESVKIAEE 598 Query: 562 QGACP--WFNETTYAKGILPIDTYKK-DLDTIANEPLHYDWEALRESIKTHGLRNSTLSA 618 +G P +++ T+ +G L D + D D L ++W + + + G+ NS ++A Sbjct: 599 KGPYPSYYWDNNTHREGKLQFDFLEGFDRDRDLTHEL-FNWREVLKKFEKFGINNSVVTA 657 Query: 619 LMPSETSSQISNATNGIEPPRGYVSIKASKDG----ILRQVVPDYEHL--HDAYELLWEM 672 PS +SSQ+++ IE K KDG I + + D E L DA +++ ++ Sbjct: 658 QPPSASSSQLNDNVESIEAITSNRFTKGIKDGKFIIINKHLQKDLEDLGMWDA-QMVGDI 716 Query: 673 PGNDGYLQ--------------------------LVGIMQKFIDQSISANTNYDPSRFPS 706 NDG +Q + +Q FIDQ+IS N + P + Sbjct: 717 EANDGSIQNIERIPKNIREIYKTAREIDHKAVVKICAAIQPFIDQTISKNM-FVPKNVDN 775 Query: 707 GKVPMQQLLKDLLTAYKFGVKT-LYY 731 P+Q ++++++ +K +KT +YY Sbjct: 776 ---PVQLIMENVILGHKMKLKTGMYY 798 >UniRef50_O12935 Ribonucleoside-diphosphate reductase n=1 Tax=Spodoptera exigua MNPV RepID=O12935_9ABAC Length = 770 Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 163/595 (27%), Positives = 257/595 (43%), Gaps = 54/595 (9%) Query: 76 DYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQ----M 131 DY LA R+ + L K F A + ++L D + K+ + Sbjct: 79 DYALLAGRILVEDLHSKVSSCFVTIA----------NDLFSRNVLSDEFNQLVKKHGAIL 128 Query: 132 DTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQ 191 + I H+RD + Y K L YL+ ++ I E Q + + VA + + + Sbjct: 129 NNEIKHERDYNYKYFGFKTLTNGYLL--KIDDVIMERPQHMLMRVALAIHGDDVKSVIET 186 Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQR 251 Y ++ TF + PT +G R +Q SC L D DS++ I K + + Sbjct: 187 YQLM---SLGTFTHASPTLFSAGTRR--QQMCSCFLQSIKD--DSVDG----IYKTLHES 235 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 A I N G L + GG +G + + F V+ QGG R GA + WH Sbjct: 236 ALIS-NLGGGLGLSAQNSGG----SGLVNMLRVFNNMVRHVDQGGKRKGALAAYIEPWHP 290 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFAD 371 E+ L L+ N G E + R + G+ I L R+ + +LFS P L D + D Sbjct: 291 EIYEFLNLRRNMGSEDTKARDLMLGLWIPDLFMKRVKNNQMWSLFSHKTCPDLADKYGFD 350 Query: 372 QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIA 431 FE Y YE + + +++VKA +LF +++ TG Y+ DHCN S + Sbjct: 351 ---FEMRYCDYE-NAQVYERQVKARDLFRFIVETNVETGGPYMLYKDHCNNFSN-QKNLG 405 Query: 432 PVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDE-------LEELAIL 484 ++ SNLC EI DEN E A+C L++ + ++D L+ L + Sbjct: 406 TIKCSNLCAEIV-------QYCDEN-ETAVCNLASIAVNKCVDVDAKTFDYVLLKHLTKI 457 Query: 485 AVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTF 544 VR L+ ++D YP ++R R +G+G+ A Y A + + Sbjct: 458 IVRNLNKIIDVNHYPTAESERSNKKHRPIGVGIQGLADAFVLLDIAYDSDDARFVNYSIA 517 Query: 545 EAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRE 604 E I + L+AS ELAK G + ++ ++GIL Y D + + + +DW L+ Sbjct: 518 ETIYFAALEASCELAKINGPYESYTDSPVSRGILHFHNY-DDENGVYHSNNLWDWNELQC 576 Query: 605 SIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY 659 +I +G+RNS L A MP+ T++QI EP V ++ G QVV Y Sbjct: 577 NINKYGVRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAGEF-QVVNQY 630 >UniRef50_A7IY07 Ribonucleoside-diphosphate reductase n=3 Tax=Chlorovirus RepID=A7IY07_PBCVN Length = 1103 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 145/459 (31%), Positives = 216/459 (47%), Gaps = 45/459 (9%) Query: 1 MNQNLLVTKRDGSTERINLDKI-HRV--LDW------------AAEGLHNVSISQVELRS 45 MN+ ++V KRDGS E I+ DKI R+ L W A GL +V +S++ Sbjct: 6 MNRLMVVLKRDGSKENISFDKILQRIQRLCWPINSKPVYKGSRAMTGL-SVDVSKIVASV 64 Query: 46 HIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDH 105 DGI T + E +A + + + PDY LAAR+++ +L+K+ + + Y Sbjct: 65 CASIVDGISTVQLDELTADKSASMTT-EHPDYGILAARISVSNLQKQTHDKITDA--YAE 121 Query: 106 VVKMVEMGKYDNHLLE-DYTEEEFKQMD---TFIDHDRDMTFSYAAVKQLEGKYLVQNRV 161 + HLL D+ E K D +FID+DRD F Y K +E YL +V Sbjct: 122 IA----------HLLSNDFKENIEKHADEYQSFIDYDRDYDFDYFGFKTMERLYLT--KV 169 Query: 162 TGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQ 221 +I E Q +Y+ VA L+ + + VK YDA+S K + +P + Q Sbjct: 170 NNKIVERPQHVYLRVAIGLWG-----SDIARVKETYDALSCRKFTHASPTLFNAGFKKAQ 224 Query: 222 FSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF 281 +SC L+ DSL I + G+GIN IR GS I G G +P Sbjct: 225 LASCFLVTVEDSLGDIYKVLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPM 284 Query: 282 YKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINK 341 K F T +QGG R G+ ++ H +V L++K N+G E R R++ Y V +N Sbjct: 285 LKVFDTTSAYANQGGRRKGSFAIYLEPHHSDVMDFLLMKRNQGEESLRARNLFYAVWLND 344 Query: 342 LMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSL 401 L R+ +LF PS+ PGL DAF +E+ LY +YE + K VKA ++++ Sbjct: 345 LFMKRVETDAQWSLFDPSECPGLTDAF---GDEYAELYERYEAEGKA-KNVVKARDVWNT 400 Query: 402 MMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 M+ TG+ Y+ N D N + +R SNLC+ Sbjct: 401 MVTTIIETGQPYVSNKDAVNKKN-MQMNAGTIRGSNLCV 438 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 12/185 (6%) Query: 458 EIALCTLSAFNL-GAINN----LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRT 512 E A+C + + L + N D+L + + + LD +D YPI A+ RR Sbjct: 784 ETAVCVIGSVVLKNYVKNDKFDFDDLRKNVKILAKNLDRSIDVMAYPIKEAETSNKLRRP 843 Query: 513 LGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETT 572 +G+GV K Y A +L + FE I Y ++AS ELA+ G P F + Sbjct: 844 IGVGVQGLQDVFFKLRFSYDSPEARDLNREIFEHIYYAAVEASVELAEIHGPYPTFEGSP 903 Query: 573 YAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNAT 632 +KGIL + D+ +N DW L E +K G+RNS ++ALMP+ +++QI + Sbjct: 904 ASKGILQYHLW--DVTPKSN----LDWRGLEERVK-KGIRNSLVTALMPTASTAQICGSV 956 Query: 633 NGIEP 637 EP Sbjct: 957 EAFEP 961 >UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=cellular organisms RepID=C1DPR2_AZOVD Length = 1338 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 125/405 (30%), Positives = 189/405 (46%), Gaps = 35/405 (8%) Query: 285 FQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMY 344 + T GG R GA + WHL++E L L+ N G + R M+ I L Sbjct: 811 YMTTSGLAHNGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFM 870 Query: 345 TRLLKGEDITLFSPSDVPGLYDAF---FADQEEFERLYTKYEKDDSIRKQRVKAVELFSL 401 R+ + TLFSPSDV L+D F ++ E+ T+Y K + + A +L+ Sbjct: 871 KRVFEDGQWTLFSPSDVRDLHDLTGRAFEERYEYYEALTQYGKIKLFKT--IAAKDLWRK 928 Query: 402 MMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIAL 461 M+ TG ++ D CN SP + V SNLC EI L N + EIA+ Sbjct: 929 MLSMLFETGHPWLTFKDPCNLRSP-QQHVGVVHSSNLCTEITL--------NTSDSEIAV 979 Query: 462 CTLSAFNL-GAINN----LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIG 516 C L + NL IN+ ++L AVR LD ++D Y + A+ R +G+G Sbjct: 980 CNLGSINLVNHINDGRLDTEKLSRTVKTAVRMLDNVIDINYYSVDTARNANFRHRPVGLG 1039 Query: 517 VINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKG 576 ++ F L Y +A ++ EAI YY ++AS +LA+E+GA F + +++G Sbjct: 1040 IMGFQDALYLQHIAYGSEAAIAFADRSMEAISYYAIQASCDLAEERGAYSSFEGSLWSRG 1099 Query: 577 ILPIDTYKKDLDTIANE----------PLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 ILP+D+ LD +A + DW LRE +K G+RNS + A+ P+ T S Sbjct: 1100 ILPLDS----LDILAEQRGTKYIEVDRSSTLDWAPLRERVK-KGMRNSNIMAIAPTATIS 1154 Query: 627 QISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWE 671 I + IEP + +K++ G + P H A E LW+ Sbjct: 1155 NIVGVSQSIEPTYQNLYVKSNLSGEFTVINPYLVHDLKARE-LWD 1198 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 24/305 (7%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETII 63 ++ V + DG +++ ++ ++ A EGL V + ++ + YDG+ D++ ++ Sbjct: 147 SIRVARADGVLVPLDMGRLDTIIGEACEGLAEVDAALIQKETLKNLYDGVAEKDVNTALV 206 Query: 64 KAAADLISRDAPDYQYLAARLAIFHLRKKAYG---------QFEPPALYDHVVKM-VEMG 113 A L+ R+ P+Y Y+ ARL + LR +A G E LY + + VE G Sbjct: 207 MTARTLVERE-PNYSYVTARLLMDTLRAEALGFLGVAESATHHEMADLYARALPVYVEKG 265 Query: 114 KYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLY 173 L E + ++ +DH+RD F+Y ++ L +Y + G +E Q + Sbjct: 266 IEFELLDPKLREFDLVRLGAALDHERDQQFTYLGLQTLYDRYFLHK--DGIRFELPQVFF 323 Query: 174 ILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDS 233 + VA L P++ + FY+ +S+F TP + T Q SSC L D Sbjct: 324 MRVAMGLAIEEPQKE--ERAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDD 381 Query: 234 LDSI-NAT--SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ---T 287 L I NA ++ + K+ G+G + +RALGS I+G G +PF K Sbjct: 382 LSGIYNAIHDNAMLSKFA---GGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAV 438 Query: 288 AVKSC 292 AV C Sbjct: 439 AVNQC 443 >UniRef50_Q8SCB8 Large subunit ribonucleotide reductase n=6 Tax=unclassified SPO1-like viruses RepID=Q8SCB8_9CAUD Length = 705 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 146/567 (25%), Positives = 263/567 (46%), Gaps = 54/567 (9%) Query: 202 TFKISLPTPIMSGVRTPTRQFSSCVL-IECGDSLDSINATSSAIVKYVSQRAGIGINAGR 260 T + + P + SG+ + SSC L I D+++SIN + ++ + G ++ R Sbjct: 148 TLQPATPVYLNSGL-GKRGELSSCYLFIVDDDTIESINFITDSVRQASKNAGGCAVDLTR 206 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 +R G+ + G G IPF K+ + +V +QGG R G+A + ++H ++ K Sbjct: 207 LRPRGTEVNGVPNASKGVIPFAKNIEQSVSYFNQGGKREGSAVCYLNIFHPDIHEFSSSK 266 Query: 321 NNRGVEGNRVRHMDYGVQI-NKLMYTRLLKGED-ITLFSPSDVPGLYDAFFADQEEFERL 378 + R+ + GV I NK M LLK + F+ DV Y F ++ Sbjct: 267 KINASDKVRLDTLSIGVTIPNKFM--ELLKEDKYYYTFNVYDVKQKY-GFTLNEINMSEY 323 Query: 379 YTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNL 438 Y + DD IRK++ ++ + + + + +G Y+ +D+ N + P + V+ SNL Sbjct: 324 YDIFVNDDDIRKEKYYTRDIMTDIARTQLESGYPYVFYIDNANDNHPL-KKLGKVQMSNL 382 Query: 439 CLEIALPTKPLNDV-------NDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDA 491 C E+ + ++D+ ND G +CTL + NL + L+E +R+L Sbjct: 383 CCEVT-QLQEVSDIFPYLQSHNDTIGNDVVCTLGSLNLVNVVEKGLLKESVDSGIRSLSK 441 Query: 492 LLDYQDYP-IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYY 550 + D + P +P+ ++ R +G+G +N+ LAK+ Y + ++ + F AI+YY Sbjct: 442 VTDLMNVPFLPSVQKANDELRAIGLGAMNWHGLLAKNMLSYGSRESLDIANSLFSAIRYY 501 Query: 551 LLKASNELAKEQGAC-PWFNETTYAKGILPIDTY------------KKDLDTIANEPLHY 597 +K+S ELAKE G F E+ Y G + +Y KK L+ + P Sbjct: 502 SIKSSMELAKETGKVFKGFKESEYYTGEV-FSSYIQKSHEPRTKKAKKVLEKVY-IPTEE 559 Query: 598 DWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVP 657 DW +L + +K +G+ N L+ L P+++ S + NAT+ I P I+ + G + +P Sbjct: 560 DWNSLSKDVKEYGMYNGYLNNLAPTQSISYVQNATSSIMPVPS--PIENRRYGNMDTYIP 617 Query: 658 D---------YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGK 708 + AY+L N + ++QK +DQ+IS + + Sbjct: 618 MPFMSPITQFFYESETAYKL-----DNKRIINTSAVIQKHVDQAIST------ILYVESE 666 Query: 709 VPMQQLLKDLLTAYKFGVKTLYYQNTR 735 +P +L+ A++ G+K+LYY ++ Sbjct: 667 IPTNKLVSLYYYAWEKGLKSLYYTRSQ 693 >UniRef50_UPI000194E523 PREDICTED: ribonucleoside-diphosphate reductase M1 chain n=1 Tax=Taeniopygia guttata RepID=UPI000194E523 Length = 847 Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 173/700 (24%), Positives = 281/700 (40%), Gaps = 125/700 (17%) Query: 130 QMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETR 189 ++++ I +DRD +++Y K LE YL+ ++ ++ E Q + + V+ + + Sbjct: 143 RLNSAIIYDRDFSYNYFGFKTLERSYLL--KINSKVAERPQHMLMRVSVGI-----HKAD 195 Query: 190 LQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC--GDSLDSINATSSAIVKY 247 + Y+ +S + +P + T Q SSC L+ C DS++ I T Sbjct: 196 IDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLL-CMKDDSIEGIYDTLKQCALI 254 Query: 248 VSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGAATLFY 306 GIG+ IRA GS I G G +P + + + QGG R GA ++ Sbjct: 255 SKSAGGIGLAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYL 314 Query: 307 PMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYD 366 WHL++ L LK N G E R R + + + I L R+ +D +L P++ PGL D Sbjct: 315 EPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDD 374 Query: 367 AFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPF 426 + EEFE+LY YE+ +R+ VKA +L+ +++ + TG Y+ D CN S Sbjct: 375 VW---GEEFEKLYESYERQGRVRRV-VKAQQLWYAIIESQTETGTPYMLYKDSCNRKSN- 429 Query: 427 DPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------NNLDELEE 480 + ++ SNLC EI T E+A+C L++ L + +L E Sbjct: 430 QQNLGTIKCSNLCTEIVEYT--------SREEVAVCNLASIALNMYVTPEHSYDFKKLAE 481 Query: 481 LAILAVRALDALLDYQDYPI-------------------------------PAAKRGAMG 509 + + VR L+ ++D YP+ P A G G Sbjct: 482 VTKVIVRNLNKIIDINYYPVPEDLNRAQFVRGAPHAELSSEETWLPQTPRSPEALPGFWG 541 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA-----IQYYLLKAS-NELAKEQG 563 G+ V +Y + G+ A L + E+ Y L K S N + +Q Sbjct: 542 SGLTGLRV-RCSY--ERQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQN 598 Query: 564 A--------CPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNST 615 C E T + IL D + + +DW+AL+E I +G+RNS Sbjct: 599 LGTIKCSNLCTEIVEYTSREEILQYDMWNVTPSDL------WDWKALKEKIAKYGVRNSL 652 Query: 616 LSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY---------------- 659 L + MP+ +++QI IEP + + G + V P Sbjct: 653 LISPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQVVNPHLLKDLTERGLWNEEMKN 712 Query: 660 ----------------EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSR 703 + L Y+ +WE+ L++ FIDQS S N + Sbjct: 713 QIIAHNGSIQNIPEIPDDLKQLYKTVWEI-SQKTILKMAADRGAFIDQSQSLNIHIAEPN 771 Query: 704 FPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQ 742 + GK+ +K G+KT +YY T+ A Q Sbjct: 772 Y--GKLTSMHFY-----GWKQGLKTGMYYLRTKPAANPIQ 804 >UniRef50_Q1IXG5 Ribonucleoside-diphosphate reductase n=6 Tax=Bacteria RepID=Q1IXG5_DEIGD Length = 649 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 163/650 (25%), Positives = 267/650 (41%), Gaps = 36/650 (5%) Query: 109 MVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYES 168 MVE G +D +L Y EE K + R S+ ++ +Y + E Sbjct: 1 MVERGFWDGEMLARYRPEEVKAVFNRAYSHRFRFQSFMGAQKFYAEYATKTPDGSRYLER 60 Query: 169 AQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLI 228 + +VA E L V TF + PT + SG + T + +SC L+ Sbjct: 61 YEDRMSMVALARAGGNA-ELALTLVDHLVR--QTFVPATPTLMNSG-KANTGRLTSCFLL 116 Query: 229 E-CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQT 287 + C DSLDSI T G+GI+ +RA G +R + G K F Sbjct: 117 QDCTDSLDSIMKTQHFAADLSKNGGGVGIDLSNLRARGESLRHLQGVTKGAAAVAKLFDV 176 Query: 288 AVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRL 347 + Q G R GAA + + H + + LL K E R++ + I + + Sbjct: 177 LFRYADQAGQRQGAAVVNLNVMHPDFQELLAGKKIATDEDARLKTLSICAVIPDVFMQAV 236 Query: 348 LKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERA 407 +D+ P F D +++ Y ++ +IRK+RV A +L + + Sbjct: 237 RDDKDVYQVYPRSYEQATGRIFTDI-DWDTEYASIVENPNIRKRRVSARQLLQEIALTQG 295 Query: 408 STGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN------DVNDENGEIAL 461 +G Y+ + N +P P + V+ +NLC EI PT P + + DE G Sbjct: 296 ESGYPYLLFTGNANRANPV-PNVGTVKMTNLCSEIMQPTLPSSFHPYGEEARDEIGLDVS 354 Query: 462 CTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYP-IPAAKRGAMGRRTLGIGVINF 520 C L++ ++G +L + A+ LD + + +PA R R++G+G + Sbjct: 355 CNLASLHIGNALKSGDLGGVVRAAISMLDDVAQSTNITEVPAVARANREMRSIGLGAMGL 414 Query: 521 AYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNETTYAKG--I 577 +LA+HG Y A FEA+ ++ +AS ELA++ G F + Y G Sbjct: 415 HGHLAEHGIAYGSPEALAFCDLFFEAVHFHARRASMELARDTGFVFAGFQGSRYQSGEYF 474 Query: 578 LPIDTYKKD-LDTIANE----------PLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 P +++ +A E P DW L I+ +GL +S + A+ P+ + S Sbjct: 475 APYTEREREPAQDLAPEVRAALQGAWLPTREDWRQLVSDIQRYGLAHSHVMAIAPTGSIS 534 Query: 627 QISNATNGIEPPRGYVSIKASKDGILRQVVPDY-EHLHDAYELLWEMPGNDGYLQLVGIM 685 ++NAT + P V + S G +P E YE ++M + V + Sbjct: 535 YVANATASVMPITERVETRTSGKGKTIYPMPGLNEQTEWFYEEAYDMDMRR-VIDTVATI 593 Query: 686 QKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTR 735 Q+ +DQ IS F V L + ++AY+ G+K+LYY R Sbjct: 594 QRHVDQGISCTL------FVRSNVTTADLARLYISAYRKGLKSLYYLRQR 637 >UniRef50_P26685 Ribonucleoside-diphosphate reductase large subunit n=7 Tax=African swine fever virus RepID=RIR1_ASFM2 Length = 779 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 176/679 (25%), Positives = 285/679 (41%), Gaps = 73/679 (10%) Query: 76 DYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQ---MD 132 DY LAARL+++ L + F ++ + + L + + +K D Sbjct: 51 DYSTLAARLSVYLLHQSTASSFSKAV-------SLQAAQSCSRLSSHFVDVVYKYKAIFD 103 Query: 133 TFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQY 192 ++ID+ RD S ++ ++ YL++N+ G I E Q Y+ VA + R ++ Sbjct: 104 SYIDYSRDYKLSLLGIETMKNSYLLKNK-DGVIMERPQDAYMRVA-IMIHGMGRVVNMKM 161 Query: 193 VKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRA 252 + YD +S I+ +P M T Q SSC L+ D+L+++ Sbjct: 162 ILLTYDLLSRHVITHASPTMFNAGTKKPQLSSCFLLNVNDNLENLYDMVKTAGIISGGGG 221 Query: 253 GIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS-CSQGGVRGGAATLFYPMWHL 311 GIG+ IRA S I G + I Y Q A + +QGG+R GA ++ +WH Sbjct: 222 GIGLCLSGIRAKNSFI-SGSGLRSNGIQNYIVLQNASQCYANQGGLRPGAYAVYLELWHQ 280 Query: 312 EVESLLVLKNNRGVEGNR---VRHMDYGVQINKLMYTRLLKGE-----DIT--LFSPSDV 361 ++ + L + +G + ++ YG+ + L + +L+ + D T LFSP Sbjct: 281 DIFTFLQMPRLKGQMAEQRLNAPNLKYGLWVPDL-FMEILEDQIHNRGDGTWYLFSPDQA 339 Query: 362 PGLYDAFFADQ-------EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERAST----G 410 P L+ F ++ EF++LY +Y + ++R V +++E T G Sbjct: 340 PNLHKVFDLERSQHENAHREFKKLYYQY-----VAEKRYTGVTTAKEIIKEWFKTVVQVG 394 Query: 411 RIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG 470 YI D N S + + SNLC+EI +P N+ E +C L+A NL Sbjct: 395 NPYIGFKDAINRKSNLS-HVGTITNSNLCIEITIPCWEGNE-----AEQGVCNLAAVNLA 448 Query: 471 AI-----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLA 525 A + L E A LD ++D YP A +R M R +GIGV A A Sbjct: 449 AFIRESSYDYRGLIEAAGNVTENLDNIIDNGYYPTEATRRSNMRHRPIGIGVFGLADVFA 508 Query: 526 KHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKK 585 ++ A + A+ Y ++ S ELAKE+G+ P F + +KG+L D + + Sbjct: 509 SLKMKFGSPEAIAIDEAIHAALYYGAMRRSIELAKEKGSHPSFPGSAASKGLLQPDLWVR 568 Query: 586 DLDTIANEPLHY-----------DWEALRESIKTHGLRNSTLSALMPSETSSQISNATNG 634 D I + W LR + G+RN L+ALMP+ TSS + Sbjct: 569 CGDLIPSWENRVAQTTQGVLTPKKWWQLRLA-AIQGVRNGYLTALMPTATSSNSTGKNEC 627 Query: 635 IEPPRGYVSIKASKDG---ILRQVVPDYEHLHDAYEL-LWEMPGNDGYLQLVGIMQKFID 690 EP + + + G IL + + D D E+ LW L G +Q +D Sbjct: 628 FEPFTSNLYTRRTLSGEFIILNKYLMD-----DLEEINLWSEDIQQQLLNAGGSIQHILD 682 Query: 691 QSISANTNYDPSRFPSGKV 709 Y SR + K+ Sbjct: 683 IPAEIRERYKTSREMNQKI 701 >UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hydrogenothermaceae RepID=C1DWR9_SULAA Length = 1222 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 107/358 (29%), Positives = 170/358 (47%), Gaps = 17/358 (4%) Query: 224 SCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYK 283 +C + DSL+SI + G+G + RIRA GS I A +G IPF K Sbjct: 644 NCYVNVIDDSLESIMDKAKETAFLAKYAGGVGTDVTRIRATGSKIHSLNAKSSGIIPFIK 703 Query: 284 HFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLM 343 F T V + QGG R + ++ WHL+VE+ L L+ G R ++ + + + Sbjct: 704 IFDTIVNAIQQGGRRRSSQVMYLQPWHLDVEAFLDLRETTGNPYFRTPSLNTALWMPDEL 763 Query: 344 YTRLLKGEDITLFSPSDVPGLYDAFFAD-QEEFERLYTKYEKDDSIRKQRVKAVELFSLM 402 R+ +GE I LF P++ P L A+ + ++E+E K EK + +++ + + + Sbjct: 764 MRRIKEGEPIYLFDPAECPKLVTAWGEEFKKEYESCIEKAEKGELKLWKKIDSRDFYKKY 823 Query: 403 MQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALC 462 + + A TG ++ D N +P P + + SNLC EI++P P A+C Sbjct: 824 LFKLAKTGHPWLTFKDRHNEKNPC-PQYSVINSSNLCTEISIPNSP--------ESTAVC 874 Query: 463 TLSAFNLG-------AINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGI 515 TL++ NL + + D+L++ V ALD +LD YP +++ M R +GI Sbjct: 875 TLASVNLARHVKEDKSDFDWDKLKDTLETMVVALDNILDKNFYPSEESRKNTMDLRPIGI 934 Query: 516 GVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTY 573 GV+ F L K G Y A K + ++ S ELAKE+GA P + E Y Sbjct: 935 GVMGFHEALIKLGIPYDSDKAVETARKIAKFMREVTYAKSEELAKERGAFPHYYEANY 992 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 18/224 (8%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVS----ISQVELRSHIQFYDGIKTSDIHET 61 +V KRDGS E+ + K+ + EGL + +V ++ + + T ++ Sbjct: 4 IVVKRDGSVEKFQMKKLVDAIFALLEGLELPDDYEIVFKVAKELDLKIPEKVTTEELDYL 63 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE 121 ++KA LI ++ Y LA R + + ++ +F + D++ VE LL+ Sbjct: 64 VLKAIEHLIPKNYI-YDTLATRQLLKIINRRIDRRFN--SFKDYINYAVEEKLLKPELLQ 120 Query: 122 DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF 181 + +++ ID+ RD Y + L+ +YL+++R E E Q+ ++ VA + Sbjct: 121 ----FDIDRLEKSIDYSRDYNLDYFGLSTLKDRYLMKDR-DFETIEKPQWFFMRVAMGI- 174 Query: 182 SNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSC 225 N E + + Y+ +S + TP + T T Q+SSC Sbjct: 175 GNTEDE-----IIKIYNKLSNLEYLHSTPTLFNSGTLTNQYSSC 213 >UniRef50_Q0ILJ1 NrdA (Fragment) n=10 Tax=unclassified T4-like viruses RepID=Q0ILJ1_9CAUD Length = 150 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 82/154 (53%), Positives = 104/154 (67%), Gaps = 7/154 (4%) Query: 611 LRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLW 670 +RNSTLSALMP E+SSQ+SN+TNGIEPPRG VS+K SK+G QVVP+ EH D Y+ W Sbjct: 1 IRNSTLSALMPCESSSQVSNSTNGIEPPRGPVSVKESKEGSFNQVVPNIEHNIDLYDYTW 60 Query: 671 EMP--GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT 728 ++ GN YL V IM K++ QS SANT YDP FP GKVPM ++ D+L + +G+K Sbjct: 61 KLAKKGNKPYLTQVAIMLKWVCQSASANTYYDPQIFPKGKVPMSIMIDDMLYGWYYGIKN 120 Query: 729 LYYQNTRDGA-EDAQDDLVPSIQDDGCESGACKI 761 YY NTRDG+ D + P +D C S CK+ Sbjct: 121 FYYHNTRDGSGTDDYEIETPKAED--CSS--CKL 150 >UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MCH3_CALMQ Length = 877 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 163/714 (22%), Positives = 307/714 (42%), Gaps = 107/714 (14%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + V KR+G E N K+ L A G N E+ S I+ + +S+I +++ Sbjct: 12 ITVIKRNGLREEFNPVKLLNSLKLA--GAPNPERILEEVTSQIKGKGEVTSSEISDSVQL 69 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVE-----MGKYDNHL 119 +LIS D + A +F + K+A+G+ ++ + + E + + N Sbjct: 70 MMLNLISEDF-KWHDAARNYLLFSIYKQAWGKEVVKSINSGSLTLSEAYRRGLRDWFNQG 128 Query: 120 LED---------YTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQ 170 L + E+ ++ +D RD+ +Y V+ L +YL++ R+ G +E+ Q Sbjct: 129 LNQGLWSLDAAKFYEKHLDELMNKLDPSRDLLLTYNGVRTLMSRYLMK-RLDGSFFETPQ 187 Query: 171 FLYILVAACL------FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSS 224 ++++ +A + + N P +++V++FYD VS K +P M T + S+ Sbjct: 188 YMWMRIAMGVAYSEVKYGNDP----IKWVEKFYDLVSQLKFLPNSPTMFNALTKLGELSA 243 Query: 225 CVLIECGDSLDS-------------INATSSAIVKYVSQRAGIGINAGRIRALGSPIRGG 271 C +I D L ++A A + + + AG+G G +R G ++ Sbjct: 244 CFVIPVDDCLSKDSNRDNPNCFFGIMDAAKLAALLFQAG-AGVGYQFGELRPEGDVVKST 302 Query: 272 EAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVR 331 +G + F + F T V QGG R GA WH ++E + K R ++ +++ Sbjct: 303 SGVASGPLSFMRLFDTLVDVIKQGGKRRGAQMGMLFWWHPDIEKFITSKTGR-LKDVQLQ 361 Query: 332 HMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQ 391 + + V I+ T+ L+GED+ L +P + LY + +EF + Y ++ + K Sbjct: 362 NFNISVTIDDYFMTKALRGEDVYLLNPRECTCLYQTW---GQEFIKCY-----EECVSKV 413 Query: 392 RVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIA--LPTKPL 449 + V+++ R + G ++ + V+ + DP + +N+ +E + ++ Sbjct: 414 KAGLVKVW-----RRVNAGELWSKIVE--SAWDSGDPGLWNRDVANMKIEYVNDVVSEKY 466 Query: 450 NDVNDEN--GEIALCTLSAFNLGAIN-----NLDELEELAI-----LAVRALDALLDYQD 497 +N N GE+AL + NLG+IN N + ++ +++ LAVR LD ++D Sbjct: 467 RVINGTNPCGEVALYPFESCNLGSINLTKYINGNSIDWVSLANDIMLAVRFLDDVIDSNQ 526 Query: 498 YPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNE 557 +P R R +G+G+ +A L Y A L + ++AS E Sbjct: 527 HPHEYLDRANKASRRIGLGINGWADVLVSLDIPYDSPKAIALADVVMGFVARVAVRASVE 586 Query: 558 LAKEQGACPWFNETTYAKGILPIDTYKK---------------------------DLDTI 590 LAKE+G P + + + G LP + + +L + Sbjct: 587 LAKEKGPFPLWPSSKWRSGFLPWRVHDERVSKMLEVKGVSSDVEEYLEILKLGYGELGGL 646 Query: 591 ANEPLHY-------DWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637 N+ Y D E ++++ T G+RN L ++ P + S I+ + IEP Sbjct: 647 PNKAEEYLAKLRATDDELIKDA-STVGVRNGALISIAPEGSRSLIAGVNSSIEP 699 >UniRef50_P50620 Ribonucleoside-diphosphate reductase subunit alpha n=170 Tax=root RepID=RIR1_BACSU Length = 700 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 155/663 (23%), Positives = 295/663 (44%), Gaps = 62/663 (9%) Query: 117 NHLLED-YTEEEFKQMDTFID--------HDRDMTF-SYAAVKQLEGKYLVQNRVTGEIY 166 ++L+E+ Y EEEF + +F D + + F S+ + + Y ++ +I Sbjct: 56 DYLVENQYYEEEFLSLYSFEDIKEVFKTAYAKKFRFPSFMSAFKFYNDYALKTNDKKKIL 115 Query: 167 ESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCV 226 E + I + A F+N E +YV + ++ S PT + +G R + SC Sbjct: 116 ERYE-DRISIVALFFANGDTEKAKEYVNLMIN--QEYQPSTPTFLNAG-RKRRGELVSCF 171 Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ 286 L+E DSL+ I+ ++ G+ +N ++RA G I+ E G + K Sbjct: 172 LLEVNDSLNDISRAIDISMQLSKLGGGVSLNLSKLRAKGEAIKDVENATKGVVGVMKLLD 231 Query: 287 TAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR 346 A + Q G R G+ + ++H ++ L K E RV+ + GV I Sbjct: 232 NAFRYADQMGQRQGSGAAYLNIFHRDINDFLDTKKISADEDVRVKTLSIGVVIPDKFVEL 291 Query: 347 LLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQER 406 + + +F P + Y D+ + +Y K+ + ++K+++ +L + R Sbjct: 292 AREDKAAYVFYPHTIYKEYGQHM-DEMDMNEMYDKFVDNPRVKKEKINPRKLLEKLAMLR 350 Query: 407 ASTGRIYIQ---NVD--HCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN-DENGEIA 460 + +G YI NV+ H N H I+ V+ SNLC E+ ++ + + DE EI Sbjct: 351 SESGYPYIMFQDNVNKVHANNH------ISKVKFSNLCSEVLQASQVSSYTDYDEEDEIG 404 Query: 461 L---CTLSAFNLGAINNLDELEELAILAVRALDALLDYQDY-PIPAAKRGAMGRRTLGIG 516 L C L + N+ + +E+ LA +L + + D PA +R +++G+G Sbjct: 405 LDISCNLGSLNILNVMEHKSIEKTVKLATDSLTHVSETTDIRNAPAVRRANKAMKSIGLG 464 Query: 517 VINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGAC-PWFNETTYAK 575 +N YLA++G Y A + + F + +Y ++ S E+AKE+G + +TYA Sbjct: 465 AMNLHGYLAQNGIAYESPEARDFANTFFMMVNFYSIQRSAEIAKEKGETFDQYEGSTYAT 524 Query: 576 G-----ILPIDTYKKDLDTIAN--EPLHY----DWEALRESIKTHGLRNSTLSALMPSET 624 G + D + + IAN E +H DW+ L+ + HG+ +S + P+ + Sbjct: 525 GEYFDKYVSTD-FSPKYEKIANLFEGMHIPTTEDWKKLKAFVAEHGMYHSYRLCIAPTGS 583 Query: 625 SSQISNATNGIEPPRGYVSIKASKDGILRQVVP-----DYEHLHDAYEL-LWEMPGNDGY 678 S + ++T + P + + + +P ++ +AY++ ++++ Sbjct: 584 ISYVQSSTASVMPIMERIEERTYGNSKTYYPMPGLASNNWFFYKEAYDMDMFKV------ 637 Query: 679 LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGA 738 + ++ +Q+ IDQ IS + F + + L + L A+ G+KT+YY T+D Sbjct: 638 VDMIATIQQHIDQGISF------TLFLKDTMTTRDLNRIDLYAHHRGIKTIYYARTKDTG 691 Query: 739 EDA 741 +D+ Sbjct: 692 QDS 694 >UniRef50_B1V8V8 Ribonucleoside-diphosphate reductase n=61 Tax=Bacteria RepID=B1V8V8_PHYAS Length = 856 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 157/650 (24%), Positives = 276/650 (42%), Gaps = 55/650 (8%) Query: 115 YDNHLLEDYTEEEFKQMDTFIDHDRDMTFS-YAAVKQLEGKYLVQNRVTG---EIYESAQ 170 Y+ L Y E++ K + I + + FS + + Y +++R E YE Sbjct: 221 YETDFLSQYNEQQIKDIYK-IAYQKQFRFSTFMGAFKFYNDYALKSRDKKYYLETYEDR- 278 Query: 171 FLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR-QFSSCVLIE 229 C+ + Y + + KR ++ + TP + R +F SC L+E Sbjct: 279 -------LCVNALYHAQGDFEIAKRLIKSLINQDFTPATPTLLNAGKKHRGEFVSCFLLE 331 Query: 230 CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAV 289 GDSL+ I + ++ G+ IN +RA G I+G + G + K + Sbjct: 332 AGDSLNDIARINEFSMQLSKIGGGVSINITNLRAKGESIKGIKGVCKGVVGVCKLLDHSF 391 Query: 290 KSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLK 349 + Q G R GA ++ ++H ++E L K E RV+ + GV + M K Sbjct: 392 RYADQMGQRTGAGAVYLSVFHADIEDFLSTKKLNADEDVRVKTLSLGVIVPNKMIELARK 451 Query: 350 GEDITLFSPSDVPGLYDAFFAD-QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERAS 408 E + F P V Y+ FAD + Y + +RK+ ++ +L L+ + + Sbjct: 452 NEVMYTFYPHTVFLEYEKNFADIAVNMDYWYDILVSNPKVRKKAIQPRQLLELIARMQGE 511 Query: 409 TGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALP--TKPLNDVN----DENGEIALC 462 +G Y+ D+ N + + + V+ SNLC EI P T D N D+ G C Sbjct: 512 SGYPYLMFCDNVNQN---NTSHLQVKFSNLCTEILQPTITSHYTDYNHTQEDKIGMDVSC 568 Query: 463 TLSAFNLGAINNLDELEELAILAVRALDAL-----LDYQDYPIPAAKRGAMGRRTLGIGV 517 L++ ++ + N + ++E +A+ ++ + ++Y +PA + R++G G+ Sbjct: 569 NLASGHMSNMINNNTIKETVFMAMEVMNTVSMKTNINY----VPAVAKANRLNRSVGFGI 624 Query: 518 INFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW-FNETTYAKG 576 + +LA++ + +L F AI YY L S + AK+ G + F ++ YA G Sbjct: 625 MGHHGFLAQNYIAFGSEENKDLIDVFFNAINYYSLLHSCQKAKKTGQKFYLFEKSHYADG 684 Query: 577 --------ILP-IDTYKKDLDTIANEPL--HYDWEALRESIKTHGLRNSTLSALMPSETS 625 ILP D KK AN PL DW+ L++ ++ GL NS A+ P+ T Sbjct: 685 SYFKGRGEILPKTDKIKK---MFANIPLPSEKDWQQLKKDVQQFGLFNSHRLAVAPNGTI 741 Query: 626 SQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIM 685 I T + P + V + + +P + Y ++M + ++ Sbjct: 742 GYIMGTTPSLTPIKQLVEERTYGNSKTYCPMPGLKETSFMYVTAYKM-NKYQLIDVIATA 800 Query: 686 QKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTR 735 QK +DQ IS + + ++L + L A+ G+KTLYY T+ Sbjct: 801 QKHVDQGISFELGI------TSDITTRELQRYYLYAHHKGIKTLYYTRTQ 844 >UniRef50_B1HSG6 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillaceae RepID=B1HSG6_LYSSC Length = 697 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 152/650 (23%), Positives = 287/650 (44%), Gaps = 42/650 (6%) Query: 109 MVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTF-SYAAVKQLEGKYLVQNRVTGEIYE 167 +V+ G Y+ ++ Y + K++ +D + F S+ + + Y +++R EI E Sbjct: 55 LVDEGYYEKAFIDMYEMDFIKKLYKKA-YDYNFRFPSFMSASKFYDSYAMKSRDGEEILE 113 Query: 168 SAQFLYILVAACLFSNYPRETRLQYVKRFYDAV-STFKISLPTPIMSGVRTPTRQFSSCV 226 + +++A Y + +R +A+ ++ + PT + SG + + SC Sbjct: 114 KYEDRIVIIAL-----YLAQGNTVLAERSVEAMMEAYQPATPTALNSG-KKARGELVSCF 167 Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ 286 + DS++SI ++ G+G+N +R LG PI+ +G IP K + Sbjct: 168 KLSMDDSMNSIAENIGYCLELSRLGGGVGVNLTDLRPLGDPIKEILNRASGVIPVAKLLE 227 Query: 287 TAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR 346 + +Q G R G+ ++ ++H ++E+ + K + R+ + G+ I + + Sbjct: 228 NSFSYSNQLGQRNGSGVVYLNIFHADIENFISSKKPNADDKIRLATLSTGIIIPSIFFEL 287 Query: 347 LLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK-QRVKAVELFSLMMQE 405 + + +DI LFSP D+ +Y ++ +Y + + IRK +R+ A L++ + + Sbjct: 288 MKRDKDIVLFSPYDIFKVYGKRMSEI-SISEMYYELLDNPKIRKIKRLNARRLYTEVKKA 346 Query: 406 RASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEI--ALPTKPLNDVNDENGEIAL-- 461 + +G + D+ N P I V+ SNLC EI T + D D+ E L Sbjct: 347 QFESGYPFEIFDDNVNDVHPL-KNIGRVKMSNLCTEILQVQETSVITD-QDQPNEYGLDV 404 Query: 462 -CTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYP-IPAAKRGAMGRRTLGIGVIN 519 C L + ++ A + +++ E L A+ L + +P+ + ++G+G +N Sbjct: 405 SCNLGSIDIHAASKVNDFEALIDTAMHLLTNVSQMTHIKNVPSVAKANQLMHSVGLGCMN 464 Query: 520 FAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW-FNETTYAKGIL 578 +L G Y + + + EA+ YY LK+S E+AKE+ + F ++ YA GI Sbjct: 465 LHGHLVTEGIMYGSKDSIHFMDRFMEAMNYYSLKSSMEMAKEKAETFYRFEDSDYASGIY 524 Query: 579 PIDTYKKD---------LDTIANEPLHYD--WEALRESIKTHGLRNSTLSALMPSETSSQ 627 D Y L + N P+ W L++ + +GL +S A+ P+ + S Sbjct: 525 -FDQYVNKTEEELSPAVLKALGNIPIITSKMWGLLKQDVMQYGLFHSYRLAIAPTGSISY 583 Query: 628 ISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGY--LQLVGIM 685 I + T I P V ++ D R + P ++ L E D Y + L Sbjct: 584 IRSCTASISPCTERVEVRDYADS--RTIYPMPHLTNENSHLYVEAYDVDPYDLIDLYAAS 641 Query: 686 QKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTR 735 QK +DQ IS + + + +QL K + A+ G+K++YY R Sbjct: 642 QKHVDQGISM------TLYVTDNWTTEQLAKVYIYAWVKGIKSVYYVRQR 685 >UniRef50_UPI0001792B32 PREDICTED: similar to AGAP010198-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792B32 Length = 766 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 170/724 (23%), Positives = 321/724 (44%), Gaps = 79/724 (10%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQ-FYDGIKTSDIH 59 + ++L V KRDG+ E+++ D+I + GL + + + + + GI TS + Sbjct: 4 LKKHLYVQKRDGTIEKVHYDEIIARIKQLCYGLEKIDPAATAIHVIKKCLFAGITTSQLD 63 Query: 60 ETIIKAAADL---ISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYD 116 + AAA++ ++ PDY+ LAAR+AI +L K+ +F + D + K + ++ Sbjct: 64 D----AAAEMAITMATIHPDYEKLAARIAISNLHKQTKEKFSD--VIDDIHKNDDY--WN 115 Query: 117 NHLLEDYTEEEFKQMDTF---IDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLY 173 L +D E K D I+++ D Y K L +LV++ + E Q L+ Sbjct: 116 TGLSDDIYEIIMKNKDRLNEAINYENDYILDYFGFKYLTQNFLVKSE--NQTIERPQHLF 173 Query: 174 ILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE---- 229 + VA + + + Y +S K+ + +P++ ++ R+ + V+ Sbjct: 174 MKVAVGIHGD-----DIDSAIETYKMLSQ-KLCMFSPVVMQLQPAARKLNVSVISHYSVA 227 Query: 230 -CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTA 288 DS+D I T + + ++ + + ++ +IRA G+ I+G +G K + + Sbjct: 228 MIADSIDGIYDTLNRLSTFILPYSSVAVHVHKIRAAGTYIKGSNGKSSGLPLMLKQYDSM 287 Query: 289 VKSCSQ-----GGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLM 343 V C + ++G A ++ +WH ++ ++ + ++++ + I Sbjct: 288 V-HCKETLERPKSIKGVA--IYCELWHADIMKIIDQIRKTTIADIKLKNSQLALWIPDEF 344 Query: 344 YTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE-KDDSIRKQRVKAVELFSLM 402 R+ + + SP PGL D EEF+ LY +YE K S ++++A +L+S + Sbjct: 345 MRRVENDQMWSFMSPDHCPGLIDVH---GEEFDNLYKEYELKSKSFVMRQIEAKKLWSQI 401 Query: 403 MQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN-DENGEIAL 461 +Q + TG + D CN S +S+L I + + V + E+A Sbjct: 402 IQSQIETGLPLLLFKDACNAKS---------NESHLG-TIQCAGRNGDTVQFTASDEVAT 451 Query: 462 CTLSAFNLGA------INNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRR---- 511 CT ++ ++ I + +L+E A L+ +++ + + + +G + Sbjct: 452 CTTASISVDMFLTSENIFDFSKLKETAKKITYDLNKIIENNNVILNKEDQLKLGLKQNQL 511 Query: 512 TLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNET 571 +GIG+ A K + + A L + E I Y L+AS ELA + G + + Sbjct: 512 AIGIGIQGLADLFIKMRYPFDNKEARYLNIQIHETIYYGALEASCELASKNGPYKTYPNS 571 Query: 572 TYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA 631 +KG+L D + + +DW +L+ I HGLRNS ++ +E S I Sbjct: 572 PTSKGLLQFDLWNVKPSNL------WDWNSLKTKIAQHGLRNSLVTVTSNTEVESTIFGN 625 Query: 632 TNGIEP-----PRGYVSIKASKDGILRQVVPDY--EHLHDAY----ELLWEMPGNDGYLQ 680 N IEP R Y+S+ SK + QVV Y + LHD +L+ E+ N G +Q Sbjct: 626 VNSIEPLDTNVKRRYISLGESKPKEI-QVVNPYLLKDLHDRKLWDEKLIPELVNNMGSIQ 684 Query: 681 LVGI 684 + + Sbjct: 685 EINL 688 >UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hydrogenothermaceae RepID=C0QPQ0_PERMH Length = 847 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 131/528 (24%), Positives = 211/528 (39%), Gaps = 70/528 (13%) Query: 150 QLEGKYLVQNRVTGEIYESAQF--LYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISL 207 LEG V +R+ E F L ++ F +Y RE + ++Y + K Sbjct: 196 HLEGLKRVYDRLNNERRMKIPFSKLLKMIEKGDFESYGRE-----IDQYYSIMVEKKFMP 250 Query: 208 PTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSP 267 TP++ P +C +++ DS++SI T G G N ++R G Sbjct: 251 NTPVLVNFGNPLGMGMACFVLDMEDSIESIMETLKRAALIFKAGGGCGYNFSKLRPKGDF 310 Query: 268 IRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEG 327 I +G I F + QGGVR GA H ++E +V K +G Sbjct: 311 ISTTHGKSSGPIAFMTLYDKMTDVIKQGGVRRGANMGILNSDHPDIEEFIVAK-----KG 365 Query: 328 NRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS 387 N VQ+ +I++F D F D + Y D Sbjct: 366 N--------VQLTNF---------NISVFLKED--------FWDYYRENKPYPLINPRDG 400 Query: 388 IRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIAL-PT 446 + V LF ++ E + + D+ N ++PF ++ +N C E+ L P Sbjct: 401 KVWKYVNPRNLFDTIVYEGWESAEPGLLFDDNINRYNPFLETFGRIQATNPCGEVLLYPN 460 Query: 447 KPLNDVNDENGEIALCTLSAFNLGAI-------------NNLDELEELAILAVRALDALL 493 + C L + NL A + D LE+ +A R LD +L Sbjct: 461 ES-------------CDLGSINLWAFIKEYYDGNGRKVEVDWDGLEKTVRIATRFLDNVL 507 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 D YP ++ + R +G+G++ A +L + Y+ + E + YY + Sbjct: 508 DINKYPFKEIEKETLKNRKIGLGIMGLADFLFELEIPYNSEDGRRWMERVMEFVNYYSKE 567 Query: 554 ASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 S +LAKE+G P +N++ Y KG LPI +++ E + DW+ L + IK HGLRN Sbjct: 568 ESIQLAKERGKFPSYNKSFYRKGKLPIRGFEE------KESWNLDWDKLIDKIKKHGLRN 621 Query: 614 STLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEH 661 + + + P+ + S I+ T+GIEP V K G V P +E Sbjct: 622 AFTTVIAPTGSISMIAGTTSGIEPIFALVYEKKVTVGTFYYVDPVFEK 669 >UniRef50_Q6VMN2 Ribonucleoside-diphosphate reductase n=10 Tax=Tortoise herpesvirus RepID=Q6VMN2_9HERP Length = 796 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 162/631 (25%), Positives = 251/631 (39%), Gaps = 110/631 (17%) Query: 190 LQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC--GDSLDSINATSSAIVKY 247 Y F++ +S I PTP M + R +SC L++ +L++++A + I+ Sbjct: 182 FNYFDYFFNLLSHNIIIPPTPAMLFMGRKNRSLASCYLLDPPQKTTLEAMSAVAQDIIPI 241 Query: 248 VSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYP 307 ++ R GIGIN +P G + G + K T V + R +F Sbjct: 242 LNHRGGIGINVNDYNQ--TPREGRKL---GFLGLAKLIDTCVLLSNSDSERPTGVCMFME 296 Query: 308 MWHLEVESLLVLKNNRGVEGN-RVRHMDYGVQINKLMYTRLLKGEDIT--LFSP--SDVP 362 W+ +VES L +K +E + R ++ + I L R + + T LF + + Sbjct: 297 PWNADVESFLGIKGLTTLEHHLRCDNIFNALWIPDLFMKRYMADPNTTWSLFDDRCNHLA 356 Query: 363 GLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNT 422 LY F D E+ RL T ++R+ +K EL +++ TG +I D CN Sbjct: 357 KLYGKEFED--EYHRLETA---GMAVRQMPIK--ELLFKIIRSAIMTGSPFIMFKDSCNR 409 Query: 423 HSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------- 472 H D +R SNLC EI T+P +D +C L NL A Sbjct: 410 HYYMDTQGQAIRGSNLCTEIIHHTEPDSD--------GVCNLMNVNLPAFLTLSFNKETY 461 Query: 473 ----------------------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGR 510 N ++L E A ++ ++D +P + GA Sbjct: 462 CLSDDTLWQEHNKFCTPGGHRYFNFEKLTEAVTAATIFINVMIDRSVHPTTKTQNGAKNF 521 Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW--F 568 R++GIG G+ A L EA+ +ASNEL + G P+ F Sbjct: 522 RSMGIGFQGLNTLCWILGETLVTPKARKLGKTICEAMYLSAAEASNELC-QLGLSPFKRF 580 Query: 569 NETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 +E+ YA+GI+ D + D + + W ALR I +GL NS ALMP+ +SSQI Sbjct: 581 SESRYARGIMHFDAW----DNVGSLTFQDRWSALRPKIIKYGLYNSQFIALMPTVSSSQI 636 Query: 629 SNATNGIEPPRGYVSIKASKDG----------------------------------ILRQ 654 + ++ P + K S +G ++ + Sbjct: 637 TESSEAFYPVFTNLYSKLSVNGETVKPNVMLLRDLGSVFKGKDYTDALEKLERHKWVVGE 696 Query: 655 VVPDY--EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPM- 711 PD +H Y +E N L+L F+D S S NT Y F GK P+ Sbjct: 697 AFPDLPTDHAIRKYLTAFEYDQNT-LLELTADRAPFVDHSQS-NTLY----FLEGKTPIS 750 Query: 712 -QQLLKDLLTAYKFGVKTLYYQNTRDGAEDA 741 + ++ L+TAYK G+KT Y A DA Sbjct: 751 AKYIMNHLVTAYKLGLKTGMYYCRIKKATDA 781 >UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=cellular organisms RepID=A9A645_NITMS Length = 884 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 127/501 (25%), Positives = 207/501 (41%), Gaps = 54/501 (10%) Query: 193 VKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRA 252 + ++D + + +P M Q S+C ++ D ++ I ++S Sbjct: 250 ITEYFDLMVSQDFLPNSPTMMNAGGRLGQLSACFVLGMQDGMEEIMKSTSDAALIFKSGG 309 Query: 253 GIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLE 312 G+GIN +R G + +G + F T + QGG R GA WH + Sbjct: 310 GVGINYSDLREEGDIVASTSGVASGPVSFMNIINTVTEVVKQGGKRRGANMGIIEAWHPD 369 Query: 313 VESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGED--ITLFSPSDVPGLYDAFFA 370 VE + K GV + + + V + + + L+ D L SP D + + Sbjct: 370 VEKFITNKTEPGV----LENFNVSVGVWEDFWHALVNTSDGNYVLRSPRDKKPVKE---- 421 Query: 371 DQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPA- 429 I ++ ++L +L + A G I+ D N ++ F A Sbjct: 422 -----------------INAHQL--IDLIALSAWKSAEPGLIFF---DQINKYNVFAKAR 459 Query: 430 IAPVRQSNLCLEIAL-PTKPLNDVNDENGEIALCTLSAFNLGAINNLD--ELEELAILAV 486 AP+R +N C E +L P + N G I L L D EE Sbjct: 460 QAPLRATNPCGEQSLYPYESCN-----LGSINLVNLVKRQADGTYEFDWQRYEETIRKTT 514 Query: 487 RALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA 546 R LD ++D YP+P + R +G+GV+ A L K Y+ L K EA Sbjct: 515 RFLDNIIDVNHYPVPEINVASKESRRIGLGVMGVADLLYKLRIPYNSKEGYELQSKLSEA 574 Query: 547 IQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESI 606 + YY ++ S LAK +G P ++T Y +G +P+ Y + E Y+W+AL E I Sbjct: 575 LTYYSMEESVALAKSRGEFPLCSKTEYPEGKIPVAGYYEK----PKESHSYEWDALVEKI 630 Query: 607 KTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG-------ILRQVVPDY 659 K +G+RN + + P+ T S I++ +NG+EP V K G I+ QV+ + Sbjct: 631 KQYGIRNVLTTTVAPTGTLSMIADCSNGMEPAFALVFEKRVTVGRFFYTNKIVEQVLKEN 690 Query: 660 EHLHDAYELLWEMPGNDGYLQ 680 +D E+L ++ N G L+ Sbjct: 691 NLYND--EILAKIADNYGSLK 709 >UniRef50_Q2N7C2 Ribonucleoside-diphosphate reductase n=90 Tax=root RepID=Q2N7C2_ERYLH Length = 681 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 125/439 (28%), Positives = 185/439 (42%), Gaps = 51/439 (11%) Query: 135 IDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVK 194 ID RD+ + + L +YL+ E Q L+ VA + ++ + Sbjct: 87 IDESRDVNLTEFGKETLIDRYLLPG-------EKFQDLFARVADAYADDQ------EHAQ 133 Query: 195 RFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGI 254 R YD +S TP++S T SC L DSLD I T + V S+ GI Sbjct: 134 RLYDYISRLWFMPATPVLSNGGTNRGLPISCYLNSVSDSLDGIVGTWNENVWLASKGGGI 193 Query: 255 GINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVE 314 G G +R +G P+ G +G IPF + + + SQG +R G+A + + H E+E Sbjct: 194 GTYWGNVRGIGEPV-GLNGKTSGIIPFVRVMDSLTLAISQGSLRRGSAACYIDIHHPEIE 252 Query: 315 SLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEE 374 L ++ G + ++ +GV I + +G + L SP Sbjct: 253 EFLEIRKPSGDFNRKALNLHHGVLITDAFMEAVREGAEFDLKSP---------------- 296 Query: 375 FERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP---FDPAIA 431 KD S+R V A LF +++ R +TG YI D N P D + Sbjct: 297 ---------KDGSVRGT-VDARSLFQKLVETRLATGEPYIVFADTVNRMMPKHHRDLGLK 346 Query: 432 PVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDA 491 V SNLC EI LPT + ND A+C LS+ NL + + ++ +R LD Sbjct: 347 -VSTSNLCSEITLPTGVDHLGNDRT---AVCCLSSLNLEKWDEWNGEKDFIEDVMRFLDN 402 Query: 492 LL-DYQDYP---IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 +L DY D + AK A R++G+GV+ F +L A K F+ I Sbjct: 403 VLQDYIDRAPDEMARAKYSASRERSVGMGVMGFHSFLQSKNLPLEGPMAKAWNDKMFKQI 462 Query: 548 QYYLLKASNELAKEQGACP 566 +AS LAKE+G CP Sbjct: 463 HAKANEASMLLAKERGPCP 481 >UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Sulfolobaceae RepID=C3N5F1_SULIA Length = 838 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 141/598 (23%), Positives = 251/598 (41%), Gaps = 81/598 (13%) Query: 137 HDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL------FSNYPRETRL 190 +++D+ SY A+K LE +YL+++ T E+ Q L+ VA L + E + Sbjct: 107 NEKDLLLSYNALKVLEARYLLKDPNTLRYIETPQMLFRRVARFLASVERKYGKSEAEVK- 165 Query: 191 QYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSL-----DSINATSSAIV 245 Q ++FY+ +S+ K +P + T S+C +I D++ D I A Sbjct: 166 QLEEKFYEMISSLKFVPNSPTLMNSETRLGILSACFVIPVKDAMTTPEGDGIYDALRATA 225 Query: 246 KYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLF 305 Q G G + +R G + +G + F K F + QGG R GA Sbjct: 226 LVHQQGGGTGFDFSELRPKGDVVASTAGVASGPVSFMKVFDASTDVIKQGGKRRGANMGV 285 Query: 306 YPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP--SDVPG 363 WH ++E + K + ++ ++++ + V ++KGE + L +P + + G Sbjct: 286 MHAWHADIEDFIRAKTGQ-LKDVQLQNFNISVGAYDYFMEAVVKGESVPLINPRKTKIAG 344 Query: 364 LYDAFFADQ------EEF--ERLYTKYEKDD---SIRKQRVKAVELFSLMMQERASTGRI 412 ++ + EE+ E + ++ E+ S+ + +V V+ ++ + + R Sbjct: 345 RDHEYYITKARGYMNEEWIQEVIISELEEKGGVVSLDESKVITVDEALIIASKEGAVVR- 403 Query: 413 YIQNVDHCNTHSPFDPAIAPVRQSN----LCLEIALPTKP---LNDVNDEN--GEIALCT 463 + N S FD + S L ++ P L +N N GE L Sbjct: 404 ------YVNAKSLFDEIVKGAWDSGDPGLLFIDTINRRHPVWYLGKINATNPCGEEPLLP 457 Query: 464 LSAFNLGAIN--------------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMG 509 + NLG+IN + D L E+ VR LD ++D YP+ + Sbjct: 458 WESCNLGSINLEKFIIERNGKVEIDWDGLAEIISYGVRFLDNVIDANRYPLKQIEDATKR 517 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 R +G+GV+ A K G Y A L+++ + I Y+ KAS E+AKE+G P ++ Sbjct: 518 TRKVGLGVMGLARMFIKLGIAYDSVDAIYLSYQLAKFIFYHAYKASIEVAKEKGPFPTYD 577 Query: 570 ETTYAKGILPIDTYKKDLD--------TIANEPLHY-----------DWEALRESIKTHG 610 Y D ++ LD +A++P Y D++ L++ +G Sbjct: 578 SKLYR------DIWESALDFNSLLQIAEVADKPSDYVKKLTGVVDKLDFDLLKDERLKYG 631 Query: 611 LRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYEL 668 LRNST+ ++ P+ T S I+ ++ IEP ++ G ++ P + YEL Sbjct: 632 LRNSTIVSIAPTGTISIIAGTSSSIEPLFALAFVRNVAVGKFIEIDPLFLEYLRKYEL 689 >UniRef50_B7R7T8 Ribonucleoside-diphosphate reductase n=2 Tax=Thermoanaerobacteraceae RepID=B7R7T8_9THEO Length = 724 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 145/611 (23%), Positives = 262/611 (42%), Gaps = 90/611 (14%) Query: 154 KYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMS 213 +Y +++R + + + ++ VA + +N E + FY +S +K I++ Sbjct: 16 RYALKDREGKPVEKKPEEMFKRVAKAIATNEKEE------EMFYKVMSEWKFIPGGRILA 69 Query: 214 GVRTPTR-QFSSCVLI--------ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRAL 264 G T + +C +I + DS +I T + +++ S+ G+GIN +R Sbjct: 70 GAGTGREVTYFNCFVIPVEANDPKKGNDSRAAIMDTIAKMLEINSRGGGVGINWSTLRPR 129 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 G+ ++G +G + + QGG R A WH ++E + +K + Sbjct: 130 GAYVKGVGGTSSGAVSWMLAANEVATQVEQGGSRRAALMFMLWDWHPDIEEFIKVKKDL- 188 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDA-FFADQEEFERLYTKYE 383 +++ + V ++ + + + L P YDA + D E+ K + Sbjct: 189 ---TKMQQANLSVAVSDAFMEAVAQDKMWKLEFPDTSHPNYDAEWKGDLNEW-----KAK 240 Query: 384 KDDSIRKQRVKAVELFSLMMQ---ERASTGRIYIQNVDH-CNTHSPFDPAIAPVRQSNLC 439 ++ + + A EL++ ++ E A G ++++ + NT+ I + +N C Sbjct: 241 GYPTVVYKEIPARELWNKIVTAAWESAEPGVVFLERYNKLSNTYY-----ITKIISTNPC 295 Query: 440 LEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELAILAVRALDALLD 494 E+ L +P +C L A NL A N +ELEE +AVR LD +LD Sbjct: 296 GELGL--EPY----------GVCNLGAINLVAFVENGRINFEELEETVKIAVRFLDNVLD 343 Query: 495 YQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKA 554 Y +P K A R +G+G++ A L RY + T + + I+ +A Sbjct: 344 LGAYVLPQNKEMAQKLRRVGLGLMGLADALILMNLRYGSEESLKATEEIVKRIRDAAYRA 403 Query: 555 SNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNS 614 S ELAKE+G P F Y KG I KD +R+ I +G+RN+ Sbjct: 404 SVELAKEKGPFPEFVADKYLKGQF-IQRLPKD---------------IRDEIAKYGIRNA 447 Query: 615 TLSALMPSETSSQISNATNGIEP--PRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEM 672 T+ P+ T+S ++ ++GIEP + YV + ++ + DY A+E+ E Sbjct: 448 TILTQAPTGTTSILAGVSSGIEPNFAKEYVRKDRTGTHTVKHWLADYPAFVSAHEVTPEE 507 Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDL----LTAYKFGVK- 727 ++++ ++QK+ID SIS N +P + D+ AY+ G K Sbjct: 508 -----HVKMQAVLQKYIDSSISKTIN----------LPRTATVDDIDNIYRLAYELGCKG 552 Query: 728 -TLYYQNTRDG 737 T+Y +R+G Sbjct: 553 ITVYRDGSREG 563 >UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7R7_KORCO Length = 876 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 103/458 (22%), Positives = 189/458 (41%), Gaps = 71/458 (15%) Query: 196 FYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIG 255 +Y + K +P + T Q S+C ++ DSL+SI +++ G+G Sbjct: 251 YYRLMVDLKFIPNSPTLFNAGTMLGQLSACFVLPIEDSLESIMRSATEAAMIFKSGGGVG 310 Query: 256 INAGRIRALGSPIR--GGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 IN ++R G +R GG+A +G + F + QGG R GA +WH ++ Sbjct: 311 INYSKLRPQGDIVRSTGGQA--SGPVSFMRIIDVITDVVKQGGRRRGANMGILEIWHPDI 368 Query: 314 ESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQE 373 + K G + + + V I + + +G+D L +P + Sbjct: 369 MKFIEAKAKPG----NLENFNLSVMITEDFWKYYEEGKDYPLINPRN------------- 411 Query: 374 EFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPV 433 ++ + ++ RK + M G ++ N++ N + + Sbjct: 412 --GEVWGSIDPREAFRK--------IAEMAWRTGDPGVLFADNINRRNI---LREHLGEI 458 Query: 434 RQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN--------------NLDELE 479 + +N C GE L + NLG++N + DE Sbjct: 459 KSTNPC-----------------GEEPLYPYESCNLGSMNLYAYIRRENGLVTFDWDEYS 501 Query: 480 ELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNL 539 A+R LD ++D +PIP ++ R +G+G++ A L Y+ N Sbjct: 502 RDIRKALRFLDNIIDVNKFPIPEIEKTTKRTRKVGLGLMGLADTLFALRIPYNSEEGFNF 561 Query: 540 THKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDW 599 + E + Y+ + S E AKE+G+ P F E+ Y +G +P++ + E + DW Sbjct: 562 MRRAAEYLTYFAMLESVERAKERGSFPLFPESGYVRGEMPVEGFYHP------EIWNLDW 615 Query: 600 EALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637 + LRE I +G+RN+ ++ + P+ + S I+ ++GIEP Sbjct: 616 DYLREQIMRNGIRNAEVTTIAPTGSISMIAEVSSGIEP 653 >UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU7_9EURY Length = 762 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 156/637 (24%), Positives = 259/637 (40%), Gaps = 122/637 (19%) Query: 151 LEGKYLVQNRVTGEIYESAQFL------YILVAACLFSNYPRETRLQYVKRFYDAVSTFK 204 L +YL++ G+I ES + L YI A F ET ++ FYDA++ FK Sbjct: 122 LASRYLLKGP-DGKIAESPKQLFTRVSHYIAAAEKKFGKSDDETNALEME-FYDAITNFK 179 Query: 205 ISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI-NATSSAIVKYVSQRAGIGINAGRIRA 263 +P + T Q S+C ++ GDS+ I +A A + + S G G + R+R Sbjct: 180 FMPNSPTLMNAGTKLGQLSACFVLPVGDSIVEIFDAVKYAAIIHQSG-GGTGFSFSRLRP 238 Query: 264 LGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNR 323 ++ +G + F K F A + QGG R GA + H + +V K N Sbjct: 239 TNDMVKSTGGVASGPVSFMKVFDIATEQVKQGGKRRGANMGILRVDHPSILDFIVAKENE 298 Query: 324 GVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE 383 G +R+ + V I L D +L +P + Sbjct: 299 GT----LRNFNISVAITDEFMKALEANRDYSLVNPRN----------------------- 331 Query: 384 KDDSIRKQRVKAV-ELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEI 442 + K +AV L M + G +++ ++ +++S P + PV +N C E Sbjct: 332 -GKVVGKLNARAVWNLIITMAWKTGDPGLVFLDRIN--SSYSNPVPTLGPVESTNPCGE- 387 Query: 443 ALPTKPLNDVNDENGEIALCTLSAFNLGAIN-NLDELEELAILAVRALDALLDYQDYPIP 501 P P + N G I + + N G + + DEL+ + + VR LD +++ YP+ Sbjct: 388 -QPLYPYDSCN--LGSINMAKMLKKNDGQYDIDWDELKRITRMGVRFLDNVIESNTYPLK 444 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 + R +G+G++ +A L K G RY A L K I K S ELA+E Sbjct: 445 EIEDVTKKIRRIGLGIMGWADMLIKLGIRYDSNEALMLAEKVMSFITENARKMSEELAEE 504 Query: 562 QGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMP 621 +G P F ++ + K L Y LRNST++ + P Sbjct: 505 RGPFPAFKDSIWYK-------------------LGY-----------KPLRNSTVTTIAP 534 Query: 622 SETSSQIS-NATNGIEPPRGYVSIKASKDGI---LRQVVPDYEHL---HDAY--ELLWEM 672 + T S I+ A+ GIEP V ++ + + L +V ++E + ++ Y EL+ ++ Sbjct: 535 TGTISIIAGGASQGIEPIFSVVYMRNVHESLGSNLIEVNNEFEAMAIENNFYSDELMKKL 594 Query: 673 PGN-------------------------DGYLQLVGIMQKFIDQSISANTNYDPSRFPSG 707 G + ++++ QK++D ++S N FPS Sbjct: 595 AGRVSIQDVEEIPQEIRRLFVTAYDIAPEWHVRMQAAFQKYVDNAVSKTIN-----FPSW 649 Query: 708 KVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQ 742 P Q + K + AYK G K T+Y RD ++ Q Sbjct: 650 ATP-QDIEKAYVLAYKLGCKGITVY----RDSSKSVQ 681 >UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=Thermococcus RepID=C5A3W2_THEGJ Length = 911 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 113/475 (23%), Positives = 190/475 (40%), Gaps = 55/475 (11%) Query: 197 YDAVSTFKISLP-TPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIG 255 Y + T ++ +P TP + P S+C ++ D ++SI + + G G Sbjct: 244 YFRLMTGQVFMPNTPALINSGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKSGGGTG 303 Query: 256 INAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVES 315 +N ++R G + +G + F QGGVR GA +WH ++E Sbjct: 304 LNFSKLRPEGDFVGSTAGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDIEK 363 Query: 316 LLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEF 375 + K + + N + + + V I + + L G+ L +P Sbjct: 364 FIHAKE-KNIGTNVLSNFNISVGIWEDFWEALRDGKRYPLVNPR---------------- 406 Query: 376 ERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQ 435 EK I + + E + M +A G I+ ++ N P P+R Sbjct: 407 -----TGEKVKEIDPKSL--FEELAFMAWSKADPGVIFFDVINRRNVLEPAKGG--PIRA 457 Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDE-------LEELAIL---A 485 +N C E +PL E C L++ NL D+ +E A + Sbjct: 458 TNPCGE-----EPLY-------EYESCNLASINLAKFVKYDDEGKPYFDWDEYAYVIQKV 505 Query: 486 VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFE 545 + LD +D +P+P R +G+G++ A L K G Y+ K E Sbjct: 506 AKYLDNAIDVNRFPLPEIDYNTKLTRRIGVGMMGLADALFKLGIPYNSEEGFAFMRKATE 565 Query: 546 AIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRES 605 + +Y K S E AK++G P + ++ Y G LP++ + I N P W+ L E Sbjct: 566 YLTFYAYKYSVEAAKKRGTFPLYEKSRYKDGELPVEGFYH--REIWNLP----WDELVEE 619 Query: 606 IKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE 660 IK HG+RN ++ P+ + S I++ ++GIEP V K+ G V P +E Sbjct: 620 IKKHGVRNGMVTTCPPTGSVSMIADTSSGIEPIFALVYKKSVTVGEFYYVDPVFE 674 >UniRef50_Q6UDJ2 Ribonucleoside-diphosphate reductase n=2 Tax=Iltovirus RepID=Q6UDJ2_9ALPH Length = 811 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 144/607 (23%), Positives = 242/607 (39%), Gaps = 93/607 (15%) Query: 196 FYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGD--SLDSINATSSAIVKYVSQRAG 253 F+ A+ +I PTP+M T +R ++SC L++ + D + + + I+ + G Sbjct: 218 FFMALCRQEIVPPTPVMLFAGTESRSYASCFLLDVRGRHTRDVLTSIAEEIIPVMHSHGG 277 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 IG+ + +G + K + + + + R ++ WH ++ Sbjct: 278 IGLYM-------DCDSNWDDNSSGMMLALKALDSIIAASNAVSARPSGLCVYVEPWHRDI 330 Query: 314 ESLLVLKNN-RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS--PSDVPGLYDAFFA 370 +L + G E R + + + + L R TLF + + LY Sbjct: 331 MKILRCRGVLAGNEETRCDNTFFALWMPDLFMKRFEANGTWTLFDGRAAHLSDLYG---- 386 Query: 371 DQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAI 430 EEFE+ Y E+ + + A ++ +++ STG ++ N + FD A Sbjct: 387 --EEFEKEYELLERKN-VGIATYPARDVMFALIKSAVSTGTPFVMFKHAVNRNYFFDMAG 443 Query: 431 APVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGA-------------INNLD- 476 ++ SNLC EI ++ +DE+ + +C L++ NL A I D Sbjct: 444 RAMKCSNLCTEI------VHMTDDES--VGVCNLTSLNLAAFVTRRNALPGTPPIGTFDY 495 Query: 477 -ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGS 535 + +A ++AL+ + PI A G R++GIGV F G Sbjct: 496 SSFRDACAVATVFINALMSLSNLPIKRATTGNERLRSIGIGVQGFHTACLLQGFGLDSVE 555 Query: 536 ANNLTHKTFEAIQYYLLKASNELAKEQGACPW--FNETTYAKGILPIDTYKKDLDTIANE 593 A K FEA+ + S + E G P+ F+E+ YAKG L +D + Sbjct: 556 ACRFNGKLFEALALTTFQTSCRIC-ELGMNPFRGFSESKYAKGWLHMDGWPA-------R 607 Query: 594 PLHYD-WEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG-- 650 L++D W+ LRE+IK +GL N L ALMP+ +SSQ++ + GI P G + K + G Sbjct: 608 HLYFDGWDRLRENIKAYGLYNCQLVALMPTASSSQLTEVSEGIHPVFGNIFSKITTTGED 667 Query: 651 ---------ILRQVVPDYEHLHDAYELL----WEMPGNDG-------------------- 677 + + P+ D E L W G G Sbjct: 668 IQLNVALMETIECLYPNKAERRDILERLHKNKWSTRGAFGAALPSQHPLTKFDTAFEADQ 727 Query: 678 --YLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNT 734 L+L F+D S S T G V ++ L TA+K+G+KT +YY Sbjct: 728 EHLLRLSADRAPFVDHSQS--TTLYVVEEDDGAVRASRVAHLLTTAFKYGLKTGMYYCKV 785 Query: 735 RDGAEDA 741 R ++ Sbjct: 786 RKATDNG 792 >UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YVI2_THEON Length = 910 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 115/470 (24%), Positives = 187/470 (39%), Gaps = 58/470 (12%) Query: 202 TFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRI 261 TF + P I SG P S+C ++ D ++SI + + G G+N ++ Sbjct: 252 TFMPNTPALINSG--RPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKMGGGTGLNFSKL 309 Query: 262 RALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKN 321 R G + +G + F QGGVR GA +WH ++E + K Sbjct: 310 RPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDIEKFIHAKE 369 Query: 322 NRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTK 381 + + N + + + V I + L +G+ L +P Sbjct: 370 -KNIGTNVLANFNISVGIWSDFWEALREGKRYPLINPR---------------------T 407 Query: 382 YEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIA-PVRQSNLCL 440 EK I + + E + M +A G I+ D N + +PA +R +N C Sbjct: 408 GEKVKEIDPKSL--FEELAFMAWAKADPGVIFF---DVINRRNVLEPAKGEKIRATNPCG 462 Query: 441 EIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDE-------LEELAIL---AVRALD 490 E +PL E C L++ NL DE +E A + + LD Sbjct: 463 E-----EPLY-------EYESCNLASINLAKFVKYDEEGKPYFDWDEYAYVIQKVAKYLD 510 Query: 491 ALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYY 550 +D +P+P R +G+G++ A L K G Y+ + K E + +Y Sbjct: 511 NAIDVNKFPLPEIDYNTKLTRRIGVGMMGLADALFKLGIAYNSKEGYDFMRKATEYLTFY 570 Query: 551 LLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHG 610 K S E AK++G P + +T Y G LP++ Y E W+ L E IK +G Sbjct: 571 AYKYSVEAAKKRGPFPLYEKTRYKDGELPVEGY------YHREVWTLPWDELVEEIKKYG 624 Query: 611 LRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE 660 +RN ++ P+ + S I++ ++GIEP V K+ G V P +E Sbjct: 625 VRNGMVTTCPPTGSVSMIADTSSGIEPIFALVYKKSVTVGEFYYVDPVFE 674 >UniRef50_D0ME23 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0ME23_RHOM4 Length = 620 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 133/535 (24%), Positives = 222/535 (41%), Gaps = 49/535 (9%) Query: 185 PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQ--FSSCVLIECGDSLDSINATSS 242 P R ++ +RFY + FK I++G T R F+ V+ DSLD I + Sbjct: 55 PESERARWAERFYQVLYGFKFLPGGRILAGAGTRHRVTLFNCFVMGIIEDSLDGIFDSLK 114 Query: 243 AIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAA 302 + Q G+G + +R G+ R +G + F + + G R GA Sbjct: 115 EGALTMQQGGGVGYDFSTLRPAGTRARTTGTIASGPVSFMHIWDAMCATLLSTGARRGAM 174 Query: 303 TLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVP 362 H ++E+ + K+ GV + H + VQ+ + + D L P+ Sbjct: 175 MATLRCDHPDIETFVTAKHRPGV----LTHFNLSVQVFDEFMEAVRRDADWPLVFPA--A 228 Query: 363 GLYDAFFADQEEFERLYTKYEKDDSIRKQRV-KAVELFSLMMQ---ERASTGRIYIQNVD 418 L D D R +T + R RV KA L+ +++ + A G ++I ++ Sbjct: 229 ALEDEGMGDGPIVYRRWTGTDGPVPCRVLRVVKARALWEQILRATYDYAEPGVLFIDTIN 288 Query: 419 HCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDEL 478 N + + A +N C E LP D+ N + + F A + + + Sbjct: 289 RMNNLAYREHITA----TNPCGEQPLPPYGACDLGSIN--LTRFVRAPFTPEADLDWEGI 342 Query: 479 EELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 E +AVR LD ++D +P+PA A G R +G+G+ A L G Y+ A Sbjct: 343 RETVAVAVRMLDNVIDVSGFPLPAQAEQARGTRRIGLGITGLADALIMLGLHYASEEARQ 402 Query: 539 LTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYD 598 L + + I + + S LA+E+G P+F Y + I +D Sbjct: 403 LAARVMQTICHTAYRTSIALAREKGVFPFFERERYLESPF-IQALPED------------ 449 Query: 599 WEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIK--ASKDGILRQ- 654 +R+ I T+G+RNS L ++ P+ T S ++ N ++GIEP Y + DG R Sbjct: 450 ---IRKGIATYGIRNSHLLSIAPTGTISLLANNVSSGIEPVFAYRYTRYILGLDGERRAY 506 Query: 655 VVPDY-----EHLHDAYELLWEMPGN----DGY--LQLVGIMQKFIDQSISANTN 698 + DY + LH E+L E + D Y L++ +Q ++D +IS N Sbjct: 507 TLTDYALRLWQRLHGDSEMLPEAFVDAQHLDPYDHLKMQAALQPYVDGAISKTVN 561 >UniRef50_D2XAL3 Ribonucleoside diphosphate reductase alpha subunit n=1 Tax=Marseillevirus RepID=D2XAL3_9VIRU Length = 916 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 91/343 (26%), Positives = 151/343 (44%), Gaps = 22/343 (6%) Query: 75 PDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTF 134 PD+ LA R I L E P + + K M + ++ +++D Sbjct: 52 PDWGVLAGRAEIRKLWS------ETPEKFSQMAK--GMKSVLDEKFYEFVASHSQELDNI 103 Query: 135 IDHDRDMTFSYAAVKQLEGKYLVQNRVTG---EIYESAQFLYILVAACLFSNYPRETRLQ 191 H+RD F + A+ LE YL++ + ++E Q +Y+ VA L+ +Q Sbjct: 104 CSHERDNRFDWMAINTLEKSYLLKKKCFDGKLRVFERPQHMYLRVATQLWM-----PDVQ 158 Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQR 251 +K FYD +S ++ +PI SSC L + D L I T + S+ Sbjct: 159 KIKEFYDGLSLGFYTVASPIFFNAGLKKFSGSSCFLGKIPDDLIGIIDTWKQMAIISSRS 218 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 G+G +A +R S I GG +G + + + QGG R G+ T F WH+ Sbjct: 219 GGVGYSASSVRH--SDIGGGLGESSGVVSLLRVPDAVLGYVDQGGRRKGSGTFFLACWHI 276 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFAD 371 ++ + + K G + + R + Y + + L R+ + +LF P + PGL + + D Sbjct: 277 DIFTFVDAKKPGGDDLKKARQLFYAIWTSDLFMKRVETDGNWSLFCPKEAPGLDEIYGKD 336 Query: 372 QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYI 414 FE LY +YEK+ R VKA EL+ ++ +A G +I Sbjct: 337 ---FEDLYERYEKEGRARTT-VKAQELWHHILVAQAEVGMPFI 375 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 47/229 (20%) Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGA-INNLDELEELAILA------VRALDA 491 CLEI + +DE EIA C LS+ L + ++ + + LA VR+L+ Sbjct: 538 CLEIT------ENTSDE--EIASCNLSSVCLNSFVDKESKKYDFGALASSVRFIVRSLNN 589 Query: 492 LLDYQDYP--IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 ++D YP +P+ K + R LGIGV A A + D A NL K FE + + Sbjct: 590 VVDRNYYPSELPSIKTTNLRHRPLGIGVQGLADTFAMMDICWGDEEARNLNRKIFETMYH 649 Query: 550 YLLKASNELAKEQGACPW-------FNETTYAKGILPIDTYKKD---------LDTIANE 593 + S +++KE+ + + F + +KG D + + D+I E Sbjct: 650 AAVTESRKISKERASLGFQTPYYETFPGSPLSKGFFAHDLWDAEALHKESGIPFDSITVE 709 Query: 594 PLH--------------YDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 + +DW+ R G+ NS L ALMP+ +++QI Sbjct: 710 QVKSYRKKKGIPESFCGFDWDKERLETMRDGVYNSLLIALMPTASTAQI 758 >UniRef50_B4W8S5 Ribonucleoside-diphosphate reductase n=2 Tax=Caulobacteraceae RepID=B4W8S5_9CAUL Length = 753 Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 140/562 (24%), Positives = 230/562 (40%), Gaps = 109/562 (19%) Query: 176 VAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRT--PTRQFSSCVLIECGDS 233 VAA L P +TR ++ RF + + ++ I++G T F+ V+ D Sbjct: 36 VAAALAEAEPTKTRARWRARFRETLDAYRFLPAGRILAGAGTGRAVTLFNCFVMGVVPDD 95 Query: 234 LDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCS 293 LD I + Q G+G++ +R G+ +RG A +G + F + + ++ Sbjct: 96 LDGIFQHLREAAVTLQQGGGVGMDFSTVRPSGALVRGVGAEASGPLSFMDVWDSMCRTIM 155 Query: 294 QGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDI 353 G R GA + H ++E+ + K + R R+ + V + Sbjct: 156 SAGQRRGAMMGCLRIDHPDIEAFIDAKRD----AVRFRNFNLSVLVPDAFMA-------- 203 Query: 354 TLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQ---ERASTG 410 L + +D P ++D IR+ V+A +L++ +MQ + A G Sbjct: 204 ALDADADWPLVFDG-------------------EIRRT-VRATDLWTRLMQATYDAAEPG 243 Query: 411 RIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG 470 I+I V+ N + + + SN C E LP C L + NL Sbjct: 244 VIFIDRVNAANNLAHCEV----IAASNPCGEQMLP------------PYGACLLGSINLA 287 Query: 471 AINN--------LDE--LEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINF 520 + + LDE L +L AVR LD ++D +P+PA + A +R LG+GV Sbjct: 288 RLVSAPFEPDAALDEQKLADLTRTAVRMLDNVIDISRFPLPAQEAEARAKRRLGLGVTGL 347 Query: 521 AYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPI 580 A L G RY + A LT + I+ +AS ELA E+GA P ++ P Sbjct: 348 ADALIFCGARYGEDRAVALTGRWLGLIRREAYRASAELAAEKGAFPLYD---------PA 398 Query: 581 DTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEPPR 639 + +L ++ E RE I HGLRN L+++ P+ T+S ++ N ++GIEP Sbjct: 399 MLQRPNLASLDAE--------TRELIGLHGLRNGCLTSIAPTGTTSLLAGNVSSGIEPVF 450 Query: 640 GYVSIKA--SKDGILRQVVPDYEHLHDAYELLWEM-----------PGN----------D 676 + + DG R+ E + D LW+ PG+ + Sbjct: 451 AFAYTRKVMQPDGTRRE-----EAVEDYALALWKTLKGPDAPLDSAPGDAFVSAQTLTPE 505 Query: 677 GYLQLVGIMQKFIDQSISANTN 698 +L++ Q ID SIS N Sbjct: 506 HHLRMQAAAQAQIDSSISKTIN 527 >UniRef50_UPI00019240FD PREDICTED: similar to ribonucleotide-diphosphate reductase large subunit, putative, partial n=1 Tax=Hydra magnipapillata RepID=UPI00019240FD Length = 416 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 89/293 (30%), Positives = 143/293 (48%), Gaps = 30/293 (10%) Query: 391 QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN 450 +++KA +L+ +++ ++ TG YI D+ N S + +R SNLC EI Sbjct: 3 RQIKARDLWRHILEAQSETGFPYILYKDNSNIKSN-QKNLGTIRSSNLCAEII------- 54 Query: 451 DVNDENGEIALCTLSAF---------NLGAINNLDELEELAILAVRALDALLDYQDYPIP 501 +DE+ E A+C L++ N I N D+L ++ +AVR LD ++D YP Sbjct: 55 QYSDEH-ETAVCNLASICLPMFIETNNNVKIYNFDKLGKVCRVAVRNLDKIIDRNYYPTE 113 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 KR + R +GIG A G +S SA L K FE I + + S ELAK+ Sbjct: 114 KTKRSNLRHRPMGIGAQGLADVYNIMGFGFSTHSAYELNKKIFETIYFACIDESKELAKK 173 Query: 562 QGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMP 621 G F + ++G L + + D + + +DW+ L +K +GLRNS L+ALMP Sbjct: 174 FGQYSTFKGSPASQGQLQFHMWGFNEDQLL---MGFDWKTLISEVKKYGLRNSLLTALMP 230 Query: 622 SETSSQISNATNGIEPPRGYVSIKASKDG----ILRQVVPDYEHLHDAYELLW 670 + ++SQI + IEP + +++ G I + ++ D HL+ LW Sbjct: 231 TASTSQIMGNSECIEPYMSNIFKRSTLAGEFIVINKHLMKDLIHLN-----LW 278 >UniRef50_B0KCF5 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=B0KCF5_THEP3 Length = 770 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 144/654 (22%), Positives = 260/654 (39%), Gaps = 143/654 (21%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN---YPRETRLQYVK-RF 196 M + A K LE +YL ++ G+ E+ + ++ VA + Y + ++ VK RF Sbjct: 1 MKITENARKVLEKRYLAKDE-NGKPIETVEEMFERVAKTIAEVDLIYDQNADVEAVKKRF 59 Query: 197 YDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI-NATSSAIVKYVSQRAGIG 255 YD + +P + P Q S+C ++ GDS++ I +A A + + S G G Sbjct: 60 YDMMVDLDFLPNSPTLMNAGRPLGQLSACFVLPVGDSMEEIFDAVKYAAIIHKSG-GGTG 118 Query: 256 INAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVES 315 + R+R G+ +R +G + F K F A ++ QGG R GA + H ++ Sbjct: 119 FSFSRLRPKGATVRSTGGVASGPVSFMKVFNAATEAVKQGGTRRGANMGILRVDHPDILE 178 Query: 316 LLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEF 375 + K + N + + + V I + F EE Sbjct: 179 FIQCKKDN----NEITNFNISVAIT-------------------------EEFMKAVEE- 208 Query: 376 ERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQ 435 +R Y + R++A E+F L+++ G I +D N +P P + + Sbjct: 209 DREYDLIDPHTGKVVNRLRAREVFDLIVEMAWRNGEPGIVFLDRINEKNP-TPEVGEIES 267 Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN--------------NLDELEEL 481 +N C GE L + NLG+IN + D+L E Sbjct: 268 TNPC-----------------GEQPLLPYESCNLGSINLENMLKKVEGRYVIDYDKLRET 310 Query: 482 AILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTH 541 AV LD ++D YP+P + G R +G+GV+ FA L + G Y A L Sbjct: 311 VYDAVHFLDNVIDANKYPLPQIEEMTKGTRKIGLGVMGFANMLLRLGIPYDSDEAVKLGE 370 Query: 542 KTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEA 601 + E I +AS +LA+++G +++++ Y K + I Sbjct: 371 ELMEFIDETSKEASIKLAEQRGTFGFYDKSIYKKMGIKI--------------------- 409 Query: 602 LRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP------------------------ 637 RN+T + + P+ T S I+ ++GIEP Sbjct: 410 ----------RNATTTTIAPTGTISIIAGTSSGIEPVFAIAMTRNVMDNTELVEVNPVFK 459 Query: 638 ----PRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMP---GNDGYLQLVGIMQKFID 690 RG+ S + ++ R + D + + + + ++ + ++ ++++ QK +D Sbjct: 460 EVAIERGFYSEELMREIARRGSLKDIKGIPEDVKRVFVIAHDIDHEWHVKMQAAFQKHVD 519 Query: 691 QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQ 742 ++S N+ + ++ + + L AYK G K T+Y RDG+ ++Q Sbjct: 520 NAVSKTVNF------RNEATVEDVRRTYLLAYKLGCKGVTIY----RDGSRESQ 563 >UniRef50_P09853 Ribonucleoside-diphosphate reductase large subunit n=10 Tax=Alphaherpesvirinae RepID=RIR1_HHV23 Length = 1144 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 148/633 (23%), Positives = 252/633 (39%), Gaps = 80/633 (12%) Query: 160 RVTGEIYESAQFLYILVAACLFSNYPRETR----------LQYVKRFYDAVSTFKISLPT 209 R G ES +Y +A L R R + K F+ + +I T Sbjct: 514 RFGGHYMESVFQMYTRIAGFLACRATRGMRHIALGRQGSWWEMFKFFFHRLYDHQIVPST 573 Query: 210 PIMSGVRTPTRQFSSCVLI--ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSP 267 P M + T SSC L+ + + ++ A + + +++ GIG+ ++A Sbjct: 574 PAMLNLGTRNYYTSSCYLVNPQATTNQATLRAITGNVSAILARNGGIGLC---MQAFNDA 630 Query: 268 IRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN-RGVE 326 G + +P K + V + ++ R A ++ WH +V ++L +K G E Sbjct: 631 SPGTASI----MPALKVLDSLVAAHNKQSTRPTGACVYLEPWHSDVRAVLRMKGVLAGEE 686 Query: 327 GNRVRHMDYGVQINKLMYTRLLK---GEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE 383 R ++ + + L + RL++ GE +S D EEFE+LY E Sbjct: 687 AQRCDNIFSALWMPDLFFKRLIRHLDGEKNVTWSLFDRDTSMSLADFHGEEFEKLYEHLE 746 Query: 384 KDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIA 443 + + +L +++ A+TG +I D N H +D A + SNLC EI Sbjct: 747 AMGF--GETIPIQDLAYAIVRSAATTGSPFIMFKDAVNRHYIYDTQGAAIAGSNLCTEIV 804 Query: 444 LPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELAILAVRALDALLDYQDY 498 P+ + +C L + NL + L + V ++ ++D Sbjct: 805 HPSSKRSS--------GVCNLGSVNLARCVSRRTFDFGMLRDAVQACVLMVNIMIDSTLQ 856 Query: 499 PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNEL 558 P P RG R++GIG+ K G +L E + +K SN L Sbjct: 857 PTPQCARGHDNLRSMGIGMQGLHTACLKMGLDLESAEFRDLNTHIAEVMLLAAMKTSNAL 916 Query: 559 AKEQGACPW--FNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTL 616 +GA P+ F + Y G + + A+ +WE LR+S+ HGLRNS Sbjct: 917 CV-RGARPFSHFKRSMYRAGRFHWERFSN-----ASPRYEGEWEMLRQSMMKHGLRNSQF 970 Query: 617 SALMPSETSSQISNATNGIEPPRGYVSIKASKDG--------ILRQVVPDY--EHLHDAY 666 ALMP+ S+QIS+ + G P + K ++DG +L+++ + + L DA Sbjct: 971 IALMPTAASAQISDVSEGFAPLFTNLFSKVTRDGETLRPNTLLLKELERTFGGKRLLDAM 1030 Query: 667 ELL----WEMPGNDGYLQLVGIMQKF-----IDQSISANTNYDPSRF------------- 704 + L W + L +++F DQ + + D + + Sbjct: 1031 DGLEAKQWSVAQALPCLDPAHPLRRFKTAFDYDQELLIDLCADRAPYVDHSQSMTLYVTE 1090 Query: 705 -PSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTR 735 G +P L++ L+ AYK G+KT +YY R Sbjct: 1091 KADGTLPASTLVRLLVHAYKRGLKTGMYYCKVR 1123 >UniRef50_P50643 Ribonucleoside-diphosphate reductase large subunit n=21 Tax=Herpesviridae RepID=RIR1_SUHVK Length = 835 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 150/596 (25%), Positives = 248/596 (41%), Gaps = 85/596 (14%) Query: 196 FYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC--GDSLDSINATSSAIVKYVSQRAG 253 ++ A++T I TP+M +SC L+ + +++ A + + + +R G Sbjct: 249 YFRALATQAIVPATPLMLFAGRARGSLASCYLLNPLPRTTEEAVRAITDEVAPILLRRGG 308 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 +G++ S G+ G + K + + + R ++ WH +V Sbjct: 309 VGLSLQSFNRTPS----GDCTR-GIMAVLKALDSMTAAINSDSERPTGVCVYVEPWHADV 363 Query: 314 ESLLVLKNNRGV----EGNRVRHMDYGVQINKLM---YTRLLKGE---DITLFS--PSDV 361 ++L N RG+ E R ++ + L Y R L GE TLF S + Sbjct: 364 RAVL---NMRGMLAADESLRCDNIFSCLWTPDLFFQRYQRHLDGERAVKWTLFDDRASHL 420 Query: 362 PGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCN 421 L+ FA E+ERL +S+ Q ++ L+++ TG ++ D CN Sbjct: 421 ASLHGPDFA--REYERLERLGLGVESLPIQ-----DMAFLIVRSAVMTGSPFLMMKDACN 473 Query: 422 THSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL-----GAINNLD 476 H D A + SNLC EI P GE +C L++ NL G + Sbjct: 474 RHFHTDTRGAALATSNLCTEIVQRATP--------GENGVCNLASVNLPACLAGGAFDFA 525 Query: 477 ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 L A +A ++A++ +YP A+ G R+LGIG+ + +D +A Sbjct: 526 ALRRAARVAAVFVNAMMRIGNYPTGASVEGVRRSRSLGIGLQGLHTTVLALDMDMADPAA 585 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPW--FNETTYAKGILPIDTYKKDLDTIANEP 594 L E + Y ++ AS EL E+G P+ F + YA+G++P D Y++ EP Sbjct: 586 RRLNAAIAEELLYGVMDASVELC-ERGLRPFDGFEHSRYARGVMPFDAYER---VSLREP 641 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG-ILR 653 + W+ALR I HG+ N+ ALMP+ +SSQ++ ++ G P + K + G +LR Sbjct: 642 MR--WDALRVRIAEHGVYNAQFVALMPTVSSSQVTESSEGFSPTFTNMFSKVTISGELLR 699 Query: 654 QVVPDYEHL----------HDAYELL----WEMPGNDGYLQLVGIMQKF-----IDQSIS 694 +P E L DA L W + G L + KF DQ + Sbjct: 700 PNLPLMETLRRLFPRECARRDAVARLERAQWSVAAAFGELPAGHPLAKFKTAFEYDQELL 759 Query: 695 ANTNYDPSRF--------------PSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTR 735 + D + F GK+ +++ L+ AY G+KT +YY R Sbjct: 760 IDMCADRAPFVDHSQSMSLFLTEPADGKLHASRVMGLLMRAYNLGLKTGMYYCKIR 815 >UniRef50_C6IVG4 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillales RepID=C6IVG4_9BACL Length = 864 Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 127/550 (23%), Positives = 226/550 (41%), Gaps = 85/550 (15%) Query: 222 FSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF 281 F+ V+ DS I T S + + +++ G+GIN +R + +RG +G + + Sbjct: 147 FNCYVIPSPKDSRGGIMETLSEMTEIMARGGGVGINLSSLRPRRAIVRGVNGSSSGAVSW 206 Query: 282 YKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINK 341 F QGG R GA L WH +V + +K G +V + + V ++ Sbjct: 207 GGLFSYTTGLIEQGGSRRGALMLMINDWHPDVLDFITVKQTMG----QVTNANLSVCVSN 262 Query: 342 LMYTRLLKGEDITLFSPSDVPGLYDAFFADQEE-FERLYTKYEKDDS--IRKQRVKAVEL 398 + + D L P D + D E ++ K++ D I + VKA E+ Sbjct: 263 AFMKAVKEDLDWDLVFP-------DTTYEDYNEVWDGDLDKWKADGRKVIHYRTVKAREI 315 Query: 399 FSLMMQ---ERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDE 455 + +++ + A G ++++ + + F+P I +N C E LP Sbjct: 316 WHTIIESAWKSAEPGVVFMEYYNQMSNSWYFNPIIC----TNPCGEQGLPG--------- 362 Query: 456 NGEIALCTLSAFNLGAINN-------LDELEELAILAVRALDALLDYQDYPIPAAKRGAM 508 +C LSA NL + DEL +VR LD +++ Y ++ Sbjct: 363 ---WGVCNLSAMNLSKFYDEEKHDVAWDELATTTRYSVRFLDNVINKTPYHFEENEKNQK 419 Query: 509 GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWF 568 R +G+G + A + K RY + K + I AS ++A+E+G+ P F Sbjct: 420 KERRVGLGTMGLAELMIKLNIRYGSPESLEFLDKLYGFIAKEAYLASADIAEEKGSFPAF 479 Query: 569 NETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 + + + K++ + E + E+++T G+RN T+ P+ ++ + Sbjct: 480 EADKFLQ-----SGFMKNMTEVYPE--------VGEAVRTKGIRNVTIITQAPTGSTGTM 526 Query: 629 SNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGN------------- 675 + GIEP + + S+ G Q VP + DA+ PG Sbjct: 527 VGTSTGIEPYFAFKYYRQSRLGFDEQFVPIAQEWMDAH------PGEPLPDYFVTAMDLS 580 Query: 676 -DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQ 732 + ++++ +Q+++D SIS N PS F V + L +L A+ G K T+Y Sbjct: 581 AEDHIRVQAAIQRWVDSSISKTANC-PSDF---TVEDTKRLYEL--AFDLGCKGVTIY-- 632 Query: 733 NTRDGAEDAQ 742 RDG+ D Q Sbjct: 633 --RDGSRDVQ 640 >UniRef50_B8J271 Ribonucleoside-diphosphate reductase n=11 Tax=Bacteria RepID=B8J271_DESDA Length = 781 Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 126/512 (24%), Positives = 213/512 (41%), Gaps = 105/512 (20%) Query: 151 LEGKYLVQNRVTGEIYESAQFLYILVAACLFS---NYPRETRL--QYVKRFYDAVSTFKI 205 L+ +YL +N + G+I E+ + L+ VAA + + NY +R Q + FYD ++++K Sbjct: 21 LQKRYLRKN-LDGKIIEAPRDLFWRVAAAIAAQEENYKNSSRTPNQLARDFYDLMTSWKF 79 Query: 206 SLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI-NATSSAIVKYVSQRAGIGINAGRIRAL 264 +P + T Q S+C ++ GDS++ I +A A + + S G G + R+R Sbjct: 80 LPNSPTLMNAGTELGQLSACFVLPVGDSIEEIFDAVKYAAMIHKSG-GGTGFSFSRLRPK 138 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 S + +G + F + F TA + QGG R GA N G Sbjct: 139 DSRVGSTGGVASGPVSFLRIFNTATEQIKQGGTRRGA--------------------NMG 178 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK 384 + RV H D I + + + +GE F+ S GL ++F E E+ Y Sbjct: 179 IL--RVDHPD----ILEFIRAKEKEGE-FNNFNLS--VGLTESFMQAVENDEQ-YDLVSP 228 Query: 385 DDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIAL 444 ++ +R+ A ++F L++++ +G I +D N +P P + +N C Sbjct: 229 NNGEVMKRLPARDVFDLLVRKAWQSGDPGIVFLDRINRDNP-TPDQGEIESTNPC----- 282 Query: 445 PTKPLNDVNDENGEIALCTLSAFNLGAIN-------------------NLDELEELAILA 485 GE L A NLG+IN + DEL + L+ Sbjct: 283 ------------GEQPLLPFEACNLGSINLSCFHVPGHENSADPAAGIDWDELRRVVHLS 330 Query: 486 VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFE 545 VR LD ++D +P+ R +G+GV+ FA L + G Y +L + Sbjct: 331 VRFLDNVIDASRFPLDRIGETVRKNRKIGLGVMGFADLLFQLGVPYDSQQGLDLGERIMA 390 Query: 546 AIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRES 605 +Q +AS ELA E+G P + + +A+ Sbjct: 391 FVQGEGHRASAELALERGPFPAYGSSVFARK----------------------------- 421 Query: 606 IKTHGLRNSTLSALMPSETSSQISNATNGIEP 637 K RN+T++ + P+ T S I+ ++G+EP Sbjct: 422 -KLGPYRNATVTTIAPTGTLSIIAGCSSGVEP 452 >UniRef50_Q66663 Ribonucleoside-diphosphate reductase n=8 Tax=root RepID=Q66663_EHV2 Length = 799 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 130/535 (24%), Positives = 213/535 (39%), Gaps = 74/535 (13%) Query: 163 GEIYESAQFLYILVAA---CLFSNYPR---------------ETRLQYVKRFYDAVSTFK 204 G +YESA +Y +AA C YP E+ L + F+ +++ Sbjct: 128 GAVYESALQMYARMAAFFTCQCFAYPSLRKTVSEVEGGSGRMESGLDFFAYFFKILASQL 187 Query: 205 ISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVS----QRAGIGINAGR 260 +S TP+M +SC ++ + + + T SA+ + +S ++G+G+N Sbjct: 188 VSCATPVMRSAGLRQSYLASCFIM--NPDMSTEDKTLSAVFRDLSPLLCSKSGVGMNLTN 245 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 + G ++ C+ + + V+ C+ +R + + +WH ++E L K Sbjct: 246 FSSGGKNVQS-------CL---RLINSQVEFCNDKNLRPVSVAAYMELWHEQIEEFLAAK 295 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDIT--LFSPSDVPGLYDAFFADQ--EEFE 376 E R + + GV + L + + D LFSP V G + D+ EE+ Sbjct: 296 LPENPE--RCQSIFQGVCVPGLFFRLYEQNPDSQWHLFSP-KVGGHLAGLYGDKFDEEYA 352 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 RL + + A L ++ TG YI + D N H F+ + + Sbjct: 353 RLVRH-----GLYSSSLPAKSLMFALISAIIKTGSPYILSKDAINRHHWFETQGNAISYA 407 Query: 437 NLCLEIAL-PTKPLNDVNDENGEIALCT--------------------LSAFNLGAINNL 475 NLC E+ P + + N N + C LS Sbjct: 408 NLCAEVVQQPHEFTSTCNLANVCLPACLRARGEGEGAGAAGEGEGADRLSPLTPDLEFCF 467 Query: 476 DELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGS 535 D L AV ++A + P P R R+ GIGV A AK G+ Y D Sbjct: 468 DTLRAAVRAAVYMINASILGGVCPTPGV-RVMQAERSAGIGVQGLADVFAKLGRGYMDAE 526 Query: 536 ANNLTHKTFEAIQYYLLKASNELAKEQGACP---WFNETTYAKGILPIDTYKKDLDTIAN 592 + L + FE + Y ++ASN+L GA P W N + ++G +++ D++ Sbjct: 527 SALLDARIFEVMYYQAVRASNQLVTVGGAPPHANWKN-SKLSRGEFHWESWGVQYDSLFI 585 Query: 593 EPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS 647 E WE LRES+ HG NS ALMP+ +SQ++ + P VS K S Sbjct: 586 E--RQLWEELRESVTKHGTFNSQFIALMPTAGTSQLTGLSESFYPFYANVSSKVS 638 >UniRef50_C6D5S5 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Paenibacillus RepID=C6D5S5_PAESJ Length = 864 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 128/560 (22%), Positives = 237/560 (42%), Gaps = 87/560 (15%) Query: 222 FSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF 281 F+ V+ DS I T S + + +++ G+GIN +R + + G +G + + Sbjct: 142 FNCYVIPSPKDSRGGIMTTLSEMTEIMARGGGVGINLSSLRPRRAVVAGVNGSSSGAVSW 201 Query: 282 YKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINK 341 F QGG R GA L WH +V + +K G +V + + V ++ Sbjct: 202 GGLFSYTTGLIEQGGSRRGALMLMINDWHPDVLDFITVKQTMG----QVTNANLSVCVSN 257 Query: 342 LMYTRLLKGEDITLFSPSDVPGLYDAFF-ADQEEFERLYTKYEKDDSIRKQRVKAVELFS 400 + + D L P YD + D E +++L K + + V+A +++ Sbjct: 258 AFMKAVKEDLDWELVFPDTKETDYDELWDGDLEAWKKLGKKV-----VHYKTVRARDVWH 312 Query: 401 LMMQ---ERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENG 457 +++ + A G ++++ + + F+P I +N C E LP Sbjct: 313 TIIESAWKSAEPGVVFMEYYNQMSNSWYFNPIIC----TNPCGEQGLPG----------- 357 Query: 458 EIALCTLSAFNLGAIN-------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGR 510 +C LSA NL N +EL ++ +VR LD ++D Y ++ Sbjct: 358 -WGVCNLSAINLSKFYDESKHDVNWEELGKVTQWSVRFLDNVIDTTPYHFEENEKNQKKE 416 Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKT--FEAIQYYLLKASNELAKEQGACPWF 568 R +G+G + A + K G RY + K F A + YL AS E+A E+G+ F Sbjct: 417 RRVGLGTMGLAELMIKLGVRYGSPESLLFLDKIYGFMAREAYL--ASAEIASEKGSFEAF 474 Query: 569 NETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 + + + + K++ + ++ + E++ G+RN T+ P+ ++ + Sbjct: 475 DAEKFLQ-----SGFMKNMVS--------EFPEVGEAVLAKGMRNVTVITQAPTGSTGTM 521 Query: 629 SNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGND------------ 676 + GIEP + + S+ G +Q+VP + DA+ PG + Sbjct: 522 VGTSTGIEPYFAFEYFRQSRLGFDKQLVPIAQAWKDAH------PGEELPDYFVTAMNLS 575 Query: 677 --GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQ 732 ++++ +Q+++D SIS N PS F V + L ++ A+ G K T+Y Sbjct: 576 AKDHIRVQAAIQRWVDSSISKTANC-PSDF---TVEETKELYEM--AFDLGCKGVTIY-- 627 Query: 733 NTRDGAEDAQDDLVPSIQDD 752 RDG+ D Q ++ + +DD Sbjct: 628 --RDGSRDVQ--VLSTKKDD 643 >UniRef50_B5YGJ2 Ribonucleoside-diphosphate reductase n=12 Tax=cellular organisms RepID=B5YGJ2_THEYD Length = 584 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 105/448 (23%), Positives = 184/448 (41%), Gaps = 54/448 (12%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP--RETRLQYVKRFYD 198 M F+ A LE +YL++N GE E+ + L+ V++ + ++ ++ ++F++ Sbjct: 1 MIFTDRAKTVLEIRYLLKNE-KGEPIENPEQLFQRVSSYIAQAEKIYKKNSFEWEEKFHE 59 Query: 199 AVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINA 258 +S+ + +P + P Q ++C ++ DS++SI T + G G N Sbjct: 60 LISSLRFLPNSPALMNAGKPKAQLAACFVLPIEDSIESIFKTLKDAALILQSGGGTGFNF 119 Query: 259 GRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLV 318 +R G +R +G + F K F A QGG R GA + H ++ + Sbjct: 120 SSLRPKGDVVRSTGGVASGPVSFMKIFDKASDIIKQGGARRGANMGVLRVDHPDIFEFIR 179 Query: 319 LKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERL 378 +K + + + V + L K + L +P Sbjct: 180 IKRIESLS-----NFNISVAVTDSFMEALFKNDYFPLINP-------------------- 214 Query: 379 YTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNL 438 + +RK VKA ++F +++ TG + +D N +P P I + +N Sbjct: 215 ----RTKEVVRK--VKAKDIFDEIVESAWETGDPGVIFIDTINRSNP-TPHIGQIDSTNP 267 Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNL------GAINNLDELEELAILAVRALDAL 492 C E P P C L + NL G I + + LE A R LD Sbjct: 268 CGE--QPLLPYE----------ACILGSLNLSKYVKEGKI-DFERLEHDVKTATRFLDDA 314 Query: 493 LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLL 552 +D YP+P ++ G R +G+G++ +A L + G Y+ A L + + I Sbjct: 315 IDVTHYPVPEVEKMHKGNRKIGLGIMGWADCLVELGIPYNHKKALALAEQVMQFISEKSH 374 Query: 553 KASNELAKEQGACPWFNETTYAKGILPI 580 KAS ELA+E+G P F + + K +P+ Sbjct: 375 KASQELAQERGVFPNFKGSVWEKKGIPM 402 >UniRef50_Q160T8 Ribonucleoside-diphosphate reductase n=25 Tax=Alphaproteobacteria RepID=Q160T8_ROSDO Length = 832 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 130/541 (24%), Positives = 215/541 (39%), Gaps = 103/541 (19%) Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTP--TRQFSSCVLIECGDSLDSINATSSAIVKYVS 249 + ++FY A+ FK I +G T F+ V+ DS+ I + Sbjct: 52 WEEKFYAALEDFKYLPAGRITAGAGTARSVTLFNCFVMGTVPDSMGGIFDMLKEAALTMQ 111 Query: 250 QRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMW 309 Q GIG + IR G+ ++G A +G + F + ++ G R GA Sbjct: 112 QGGGIGYDFSTIRPKGADVKGVAADASGPLSFMDVWDAMCRTIMSAGSRRGAMMATMRCD 171 Query: 310 HLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFF 369 H +VE + K++ R+R + V I + +K + G +D F Sbjct: 172 HPDVEDFIAAKSDPA----RLRMFNMSVLITD-PFMEAVKAD-----------GPWDLVF 215 Query: 370 ADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQ---ERASTGRIYIQNVDHCNTHSPF 426 D + V+A +L++ +MQ + A G I+I ++ N S Sbjct: 216 ----------------DGKVYRTVQARDLWNRIMQATYDYAEPGVIFIDRINQANNLSYC 259 Query: 427 DPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN--------LDE- 477 + A +N C E LP C L + NL + + LDE Sbjct: 260 ETIAA----TNPCGEQPLPP------------YGACLLGSINLARLVSNPFEDTAALDEA 303 Query: 478 -LEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 L++L AVR +D ++D +P+ A R A +R +G+GV A L G RY A Sbjct: 304 ALDDLVATAVRMMDNVVDASKFPLEAQAREAQAKRRIGLGVTGLADALLMMGLRYGSDEA 363 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 T + +I AS +LA+E+GA P F+ Y +A+ + Sbjct: 364 ARQTDRWLHSIARAAYLASVDLAREKGAFPLFDADKY----------------LASGTMQ 407 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKA--SKDGILR 653 E +R++++ HG+RN+ L+++ P+ T S + N ++GIEP Y + KDG Sbjct: 408 AMDEDVRDAVREHGIRNALLTSIAPTGTISLYAGNVSSGIEPVFAYAYTRKVLQKDGSRT 467 Query: 654 QVVPDYEHLHDAYELLWEMPGNDG----------------YLQLVGIMQKFIDQSISANT 697 + E + D LW D ++++ QK++D SIS Sbjct: 468 E-----EEVVDYAVQLWREKFGDKELPDYFVNAQTLAPLEHVKMQAAAQKWVDSSISKTI 522 Query: 698 N 698 N Sbjct: 523 N 523 >UniRef50_B1XZE5 Ribonucleoside-diphosphate reductase n=11 Tax=Betaproteobacteria RepID=B1XZE5_LEPCP Length = 1007 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 141/612 (23%), Positives = 248/612 (40%), Gaps = 86/612 (14%) Query: 176 VAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLD 235 VAA L S E R + +RF A + + T + +C + GDS+ Sbjct: 60 VAAALASVEAPEARELWTERFLAAQERGFVPAGRIASAAGTTLSATLINCFVQPVGDSIA 119 Query: 236 SINATSSAIVKYVSQRA-------GIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTA 288 I +++ A G+G + RIR G+ + ++ +G + + + F + Sbjct: 120 EPEEGFPGIYTALTEAAETMRRGGGVGYDFSRIRPYGAWVGSTQSHASGPVSYMRVFDRS 179 Query: 289 VKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLL 348 ++ G R GA H +VE+ + K+ +++ + V + + + Sbjct: 180 CETVESAGSRRGAQMGVLRCDHPDVEAFIHAKDK-----GDLKNFNISVGVTDVFMKAVE 234 Query: 349 KGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQR-VKAVELFSLMMQ--- 404 D+ L ++ PG E ++ ++ D + R V+A +L+ +M+ Sbjct: 235 ADTDVDLVHKAE-PG----------EKQKAAGARQRADGLWVYRSVRARDLWDQIMRSTY 283 Query: 405 ERASTGRIYI------QNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGE 458 + A G +++ N+ +C T + +N C E LP P + + Sbjct: 284 DHAEPGVLFLDRINQDNNLSYCET----------IAATNPCAEQPLP--PYGCCCLGSVD 331 Query: 459 IALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVI 518 + F A + E+ A R LD +LD +P+PA ++ A +R +G+G Sbjct: 332 LTHFVQRPFESDASFDDAAFAEVCATATRMLDNVLDATVWPLPAQQQEAANKRRVGLGFT 391 Query: 519 NFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGIL 578 L G RY +A + E ++ AS++LA+E+GA P FN Y G Sbjct: 392 GLGDALIMLGLRYDTPAARAMATHISEVMRDAAYIASSDLAQERGAFPLFNADLYLSG-- 449 Query: 579 PIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQ--ISNATNGIE 636 +++ L A++E I+ +GLRNS L ++ P+ T S NA+NGIE Sbjct: 450 --NSFASRLPA-----------AVKEHIRVNGLRNSHLLSIAPTGTISLAFADNASNGIE 496 Query: 637 PPRG--YVSIKASKDGILRQVVPD------YEHLH-------DAYELLWEMPGNDGYLQL 681 PP Y K DG ++ + Y HL DA+ EM + + + Sbjct: 497 PPFSWTYTRKKREADGTFKEFAVEDHAWRLYRHLKGADAPLTDAFVTALEM-SAEAHESM 555 Query: 682 VGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL--YYQNTRDGAE 739 V + ID SIS N P+ + P + + A+K G+K L Y N+ G+ Sbjct: 556 VAAVAPCIDTSISKTVNV-PADY-----PYEDFQGLYMAAWKSGLKGLATYRPNSVLGSV 609 Query: 740 DAQDDLVPSIQD 751 + VP + + Sbjct: 610 LSVTPTVPVVAE 621 >UniRef50_Q77MS1 Ribonucleoside-diphosphate reductase n=9 Tax=Herpesviridae RepID=Q77MS1_GAHVM Length = 822 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 122/497 (24%), Positives = 212/497 (42%), Gaps = 61/497 (12%) Query: 196 FYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE--CGDSLDSINATSSAIVKYVSQRAG 253 F+ A++ TP M + +SC L++ ++ D++ A + +V ++ R G Sbjct: 236 FFLALANQLFVPSTPCMLFLGREGTSTASCYLMDPRTNNTQDTLKAITEDVVPHLLARGG 295 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 IGI+ + G + K + V + + R ++ WH ++ Sbjct: 296 IGISLQHLNG-----------KFGLMHVMKVLDSLVMAANVNESRPTGICVYLEPWHADI 344 Query: 314 ESLLVLKNNRGV----EGNRVRHMDYGVQINKLMYTRLLK---GEDITLFSPSDVPGLYD 366 S L N RG+ E R ++ + L++ R L+ GE +++ L+D Sbjct: 345 MSAL---NMRGMVAAEESRRCDNVFLALWSCDLLFKRYLRHVNGEKNVIWT------LFD 395 Query: 367 AFFA-----DQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCN 421 + + EEFE+ Y + E + + + ++ +++ ASTG +I D CN Sbjct: 396 SRASILTKLHSEEFEKEYERLESE-GLGVASIPIRDMMFAIIKSAASTGSPFILFKDACN 454 Query: 422 THSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG-AINNLD---- 476 H + + SNLC EI T D N NG +C+L++ NL + N+D Sbjct: 455 RHYITNTQGDAIAGSNLCTEIIQKT----DANT-NG---VCSLASINLARCVRNIDGNRQ 506 Query: 477 ----ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYS 532 L LA ++A+++ D P + G R++GIGV F G Sbjct: 507 FDFDALRYAVRLATVFVNAIMEGSDVPTEKSHSGRERNRSMGIGVQGFHTAFLSMGLDLC 566 Query: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW--FNETTYAKGILPIDTYKKDLDTI 590 D A +L FE + + S E E+G P+ F+ + YA+G L D + +++ Sbjct: 567 DERARSLNKLIFEFMLLEAMTVSCEFC-ERGLPPFADFSNSYYARGRLHFDGWA-NVELA 624 Query: 591 ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG 650 A E +W LR+ I + GL N+ ALMP+ S+Q++ + G P + K + G Sbjct: 625 AVE----EWNMLRDRIVSAGLYNAQFIALMPTAASAQVTEVSEGFSPLFSNMFSKVTSTG 680 Query: 651 -ILRQVVPDYEHLHDAY 666 +LR + E L Y Sbjct: 681 ELLRPNIQLMEELRTIY 697 >UniRef50_A5FCJ4 Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ4_FLAJ1 Length = 565 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 141/606 (23%), Positives = 237/606 (39%), Gaps = 152/606 (25%) Query: 196 FYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIG 255 F + + +S+ +P+ + + T SC + D ++ I ++ G Sbjct: 67 FVEMIERGWMSISSPVWANMGTERGLPISCFNVHVPDKIEGITHKLGEVIMQTKIGGGTS 126 Query: 256 INAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVES 315 G +R GS + +G + F K F TA+ + SQGGVR GA + + H ++E Sbjct: 127 GYFGELRERGSAVTDN-GKSSGAVSFMKLFDTAMDTISQGGVRRGAFAAYLDIDHPDIEE 185 Query: 316 LLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEF 375 L +K+ GN ++++ G+ + ++ G+ AD+ + Sbjct: 186 FLKIKSI----GNPIQNLFTGICVPDYWMQEMIDGD------------------ADKRQ- 222 Query: 376 ERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP--FDPAIAPV 433 +++ +++ R G YI D+ N + P + + Sbjct: 223 ----------------------IWAKVLESRQQKGLPYIFFSDNVNKNKPQVYKDQNLRI 260 Query: 434 RQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALL 493 SNLC EI LP+ +DE+ +C LS+ NL + E + LA+ LDA+L Sbjct: 261 NASNLCSEIMLPS-----THDES---FICCLSSMNLELYEEWKDTEAVK-LAIFFLDAVL 311 Query: 494 DY------QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 +Y + AA + A R LG+GV+ + YL K+ + A T + F+ I Sbjct: 312 QEFIEKTEGNYYLSAANKFAKRHRALGLGVLGWHSYLQKNMIPFEGMEAKMKTTEIFKHI 371 Query: 548 QYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 KAS ELA+ I EP E +K Sbjct: 372 SDKADKASQELAR-----------------------------IYGEP---------ELLK 393 Query: 608 THGLRNSTLSALMPSETSSQISNATN-GIEP-PRGYVSIKASKDGILRQVV--------- 656 +G RN+T A+ P+ +SS I T+ GIEP Y SK +R+ Sbjct: 394 GYGRRNTTTMAIAPTTSSSAILGQTSPGIEPFSSNYYKAGLSKGNFMRKNKYLKKLLEEK 453 Query: 657 ---------------PDYEHL-------HDAYELLWEMPGNDGYLQLVGIMQKFIDQSIS 694 +H+ D ++ E+ + +Q GI QKF+DQ S Sbjct: 454 GLDNEEVWRGIMLNGGSVQHMSQLTQQEKDVFKTFKEISQLE-IVQQAGIRQKFVDQGQS 512 Query: 695 ANTNYDPSRFPSGKVPMQQLLKD----LLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQ 750 N N +P + +KD ++ A++ GVK+LYYQ ++ +++ LV Sbjct: 513 LNLN----------IPAELAIKDVNRLMIEAWQQGVKSLYYQRSQSVSKELVTSLVSC-- 560 Query: 751 DDGCES 756 CES Sbjct: 561 -SSCES 565 >UniRef50_Q01037 Ribonucleoside-diphosphate reductase large subunit n=6 Tax=root RepID=RIR1_SHV21 Length = 767 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 119/487 (24%), Positives = 205/487 (42%), Gaps = 41/487 (8%) Query: 183 NYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSS 242 N +T +Q K FY +S+ + TP+M SSC +I +LD+ +T S Sbjct: 150 NVEIKTDMQIFKYFYKVISSQLVCCATPVMRSAGVAGENLSSCFII--APTLDTEKSTIS 207 Query: 243 AI----VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVR 298 +I ++ R+G+G++ + GG+ H+ C+ K V+ + VR Sbjct: 208 SIFGELAPLLASRSGVGVDVTKFSF------GGKNIHS-CL---KLINAQVEFFNDKSVR 257 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGED--ITLF 356 + + +WH ++ L K +R + GV + L + + LF Sbjct: 258 PVSVATYIEVWHCQIHEFLSAKLPEN--PDRCNSIFQGVCVPSLFFKMYESDPNGLWYLF 315 Query: 357 SPSDVPGLYDAFFAD-QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQ 415 P D P L + + +EE+ RL ++ + KQ V L ++ TG Y+ Sbjct: 316 DPQDAPNLTRLYGLEFEEEYLRLVSEKK-----YKQSVTLKSLMFSLINTIIKTGSPYVI 370 Query: 416 NVDHCNTHSPFDPAIAPVRQSNLCLEIAL-PTKPLNDVNDENGEIALCTLSA-FNLGAIN 473 + + N H ++ + SNLC EI P + + N N + C S+ F N Sbjct: 371 SKEAMNKHHWYETQGEAINCSNLCAEIVQQPKQFTSTCNLANVCLPKCLNSSNFPYTCSN 430 Query: 474 ----NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGK 529 + +LE AV ++A + P +A G R++GIG A ++ G Sbjct: 431 TAQFDFSKLEYAVQAAVFIINACI-LSPSPTSSATVG-QRERSMGIGCHGLADVFSEMGY 488 Query: 530 RYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW--FNETTYAKGILPIDTYKKDL 587 Y D + L FE + Y +K S+E+ P+ F ++ A G+ T+ Sbjct: 489 GYLDLESECLDRDIFETMYYTAVKTSSEICSVGKGQPFAGFRKSKLAHGVFHWATW---- 544 Query: 588 DTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS 647 D + W L+++IK G+ NS ALMP+ +SQ++ T+ P +S K S Sbjct: 545 DAMPQRVPMKQWIHLQDNIKKFGVFNSQFIALMPTAGTSQLTGYTDSFYPYFANMSSKVS 604 Query: 648 -KDGILR 653 K+ I++ Sbjct: 605 NKEEIMK 611 >UniRef50_C1D7Z3 Ribonucleoside-diphosphate reductase n=5 Tax=Betaproteobacteria RepID=C1D7Z3_LARHH Length = 947 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 118/509 (23%), Positives = 207/509 (40%), Gaps = 66/509 (12%) Query: 224 SCVLIECGDSLDSINATSSAIVKYVSQRA-------GIGINAGRIRALGSPIRGGEAFHT 276 +C + GDS+ I + + Q A G+G N RIR G+ ++G + + Sbjct: 84 NCFVQPVGDSVSETRDGKVGIYEALLQAAETMRRGGGVGYNFTRIRPKGARVKGTNSRAS 143 Query: 277 GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYG 336 G + + + F + ++ G R GA H ++ES + K+ +R+ + Sbjct: 144 GPVSYMRVFDRSCETVESAGARRGAQMGVLDCDHPDIESFIHAKD-----AGDLRNFNIS 198 Query: 337 VQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAV 396 V ++ + L + D++EF + D + V+A Sbjct: 199 VGVSDAFMQAVEADGSWELVHKEE---------PDRKEFPDACQR--ADGKWVYRAVRAR 247 Query: 397 ELFSLMMQ---ERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN 453 +L++ +M+ + A G +++ ++ N S + +N C E LP D+ Sbjct: 248 DLWNQIMESTYDHAEPGVLFMSKINRDNNLS----YCEVIESTNPCGEQPLPDYGCCDLG 303 Query: 454 DENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTL 513 N + F A + +++ +VR LD +LD +P+P +R A +R + Sbjct: 304 SIN--LTRFVRDPFTAKAGFDFATFDKVVRQSVRMLDNVLDLTVWPLPEQQREAQSKRRI 361 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTY 573 G+G L +YS + + EA++ AS +LA E+GA P F+ Sbjct: 362 GLGFTGLGDALIMLTIKYSSDAGRAFAARVSEAMRNSAYDASVDLAIEKGAFPLFD---- 417 Query: 574 AKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQ--ISNA 631 D Y + + P + ++ IK HG+RNS L ++ P+ T S NA Sbjct: 418 ------ADQYLAEPHCASRLP-----KEIKARIKKHGIRNSHLLSIAPTGTISLAFADNA 466 Query: 632 TNGIEPPRG--YVSIKASKDG-------------ILRQVVPDYEHLHDAYELLWEMPGND 676 +NGIEPP Y K DG + R++ D L D + EM D Sbjct: 467 SNGIEPPFSWFYTRKKRMADGTQQEYRVEDHAYRVYRELGGDVSSLPDYFVSALEMSALD 526 Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFP 705 ++ +V + FID +IS N P+ +P Sbjct: 527 -HMSMVAAVAPFIDTAISKTVNV-PADYP 553 >UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=Mycobacterium RepID=A1KG47_MYCBP Length = 710 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 126/555 (22%), Positives = 201/555 (36%), Gaps = 105/555 (18%) Query: 127 EFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS---N 183 E + + ++ S AAV L +YL+ + G ES L A C+ + Sbjct: 93 ELRTAKALLGVRDELKLSLAAVTVLRERYLLHDE-QGRPAESTGELMDRSARCVAAAEDQ 151 Query: 184 YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSA 243 Y + ++ +RF + + +P + T + C ++ DSL SI AT Sbjct: 152 YEPGSSRRWAERFATLLRNLEFLPNSPTLMNSGTDLGLLAGCFVLPIEDSLQSIFATLGQ 211 Query: 244 IVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAAT 303 + G G +R G + +G + F + + +A S GG R GA Sbjct: 212 AAELQRAGGGTGYAFSHLRPAGDRVASTGGTASGPVSFLRLYDSAAGVVSMGGRRRGACM 271 Query: 304 LFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVP- 362 + H ++ + K SPS++P Sbjct: 272 AVLDVSHPDICDFVTAKAE----------------------------------SPSELPH 297 Query: 363 -----GLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417 G+ DAF E L+ R+ A ELF + + + G + + Sbjct: 298 FNLSVGVTDAFLRAVER-NGLHRLVNPRTGKIVARMPAAELFDAICKAAHAGGDPGLVFL 356 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN---- 473 D N +P P + +N C GE+ L + NLG+IN Sbjct: 357 DTINRANPV-PGRGRIEATNPC-----------------GEVPLLPYESCNLGSINLARM 398 Query: 474 ------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKH 527 + D LEE+A +AVR LD ++D YP P A R +G+GV+ A LA Sbjct: 399 LADGRVDWDRLEEVAGVAVRFLDDVIDVSRYPFPELGEAARATRKIGLGVMGLAELLAAL 458 Query: 528 GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDL 587 G Y A L + IQ AS LA+E+GA P F ++ +A Sbjct: 459 GIPYDSEEAVRLATRLMRRIQQAAHTASRRLAEERGAFPAFTDSRFA------------- 505 Query: 588 DTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS 647 ++ RN+ ++++ P+ T S I+ T GIEP +A Sbjct: 506 -------------------RSGPRRNAQVTSVAPTGTISLIAGTTAGIEPMFAIAFTRAI 546 Query: 648 KDGILRQVVPDYEHL 662 L +V P ++ L Sbjct: 547 VGRHLLEVNPCFDRL 561 >UniRef50_Q21U31 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21U31_RHOFD Length = 589 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 135/572 (23%), Positives = 238/572 (41%), Gaps = 87/572 (15%) Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTPTRQ--FSSCVLIECGDSLDSINATSSAIVKYVS 249 + +RF +S ++ I++G T R F+ + DS+ I ++ + Sbjct: 54 WRERFLAMLSDWRFLPGGRILAGAGTSRRVTLFNCLAMGPIEDSVQGIFNALREAMQCLQ 113 Query: 250 QRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMW 309 IGI+ +R + + A +G + F +Q A G R A Sbjct: 114 AGGAIGIDFSTLRPALALAQSSGAVASGPVSFMNVWQAANAVLEAGNRRRSAMLATLRCD 173 Query: 310 HLEVESLLVLKNNRGVEGNRVRHMDYGVQIN-KLMYTRLLKGEDITLFSPSDVPGLYDAF 368 H ++E+ + K + G + H V +N + M G +F + P Sbjct: 174 HPDIEAFIDAKLDTGA----LSHFKLSVLLNDEFMQALQEDGPWPLVFPLGEHP-----I 224 Query: 369 FADQEEFERLYTKYEKDD-SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD 427 E ER+++ + +RV A L+ ++Q + ++G + +D N Sbjct: 225 PVGGEVCERVWSDGGPPQLCMVHRRVPARALWEKLLQAQHASGEPGVLFIDRIN------ 278 Query: 428 PAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-------------- 473 R +NL + L V + +G + L A NLG+IN Sbjct: 279 ------RANNLWYDEHL------TVANPDGGVPLPPWGACNLGSINLSRFVQQPFAAHPS 326 Query: 474 -NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYS 532 +L L +A +A R LD + D +P+ A ++ A+ R +G+GV A LA G RY Sbjct: 327 VDLGGLRAVAAVATRFLDDVYDISLFPLKAQQKSALASRRIGLGVTGLADMLAMLGLRYG 386 Query: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592 ++ +LT + AI+ + S ELA+E+GA P ++ Y + +LD Sbjct: 387 SAASIDLTREIMGAIRDTAYRTSVELAQEKGAFPACDKLKYGA-----SPFVLELD---- 437 Query: 593 EPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKASKDGI 651 AL+++I HG+RNS L A+ P+E+ S ++ N +NGIEP R + +++ + Sbjct: 438 -------RALQDAIAQHGIRNSHLLAVAPTESISLLANNVSNGIEPMRAFQAMRRVRGAE 490 Query: 652 LRQVVPD--------YEHLHDAYELLW--------EMPGNDGYLQLVGIMQKFIDQSISA 695 + V D Y+ LH + W ++ D LQL+ +Q +D ++S Sbjct: 491 GQAVFFDVEDAACRQYQALHGP-DAPWPKHFVQAADVSAED-QLQLMAAVQSHVDNALS- 547 Query: 696 NTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK 727 T Y P+ +Q + L A++ G+K Sbjct: 548 KTVYLPA-----SASVQDVGLVLQQAWELGLK 574 >UniRef50_C3XAC6 Ribonucleoside-diphosphate reductase n=3 Tax=Betaproteobacteria RepID=C3XAC6_OXAFO Length = 963 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 126/550 (22%), Positives = 220/550 (40%), Gaps = 94/550 (17%) Query: 224 SCVLIECGDSLDSINATSSAIVKYVSQRA-------GIGINAGRIRALGSPIRGGEAFHT 276 +C + GDS+ ++ I ++Q A G+G N IR G+ +RG + + Sbjct: 96 NCFVQPVGDSITNMVDGKPGIYTALAQAAETMRRGGGVGYNFSSIRPRGAKVRGTGSSAS 155 Query: 277 GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYG 336 G I + K F + ++ G R GA + H ++ + +K E N++ + + Sbjct: 156 GPISYMKVFDRSCETVESAGARRGAQMAVLNIDHPDIVEFITIKQ----EQNQLSNFNVS 211 Query: 337 VQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK-DDSIRKQRVKA 395 V + + D L A A+ + Y++ D +VKA Sbjct: 212 VGVTDKFMQAVESDGDFEL-----------AHVAEPNNELKEKGSYKRADGKWVYSKVKA 260 Query: 396 VELFSLMMQER---ASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDV 452 +++ L+M+ A G +YI ++ N + + + +N C E LP Sbjct: 261 RDIWDLVMKSTYNAAEPGVLYIDRINRENNLAYCEV----IEATNPCGEQPLP------- 309 Query: 453 NDENGEIALCTLSAFNLGA----------INNLDELEELAILAVRALDALLDYQDYPIPA 502 + C L + NL + + + + + +AVR LD +L +P+ Sbjct: 310 -----DYGCCCLGSLNLTSFVTAPFSAHPLFDFNLFARVTKIAVRMLDNVLTATKWPLEE 364 Query: 503 AKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQ 562 + A +R +G+G L G RY A L+ + +A++ S +LAKE+ Sbjct: 365 QAKEAAAKRRIGLGFTGLGDALIMLGIRYDSEEARILSSEISKAMRDAAYSGSIDLAKER 424 Query: 563 GACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPS 622 GA P + Y KG ++ P E ++ I+ HG+RNS L+++ P+ Sbjct: 425 GAFPMLDVENYLKGGF-----------VSRLP-----EEMKAQIRKHGIRNSHLTSIAPT 468 Query: 623 ETSSQ--ISNATNGIEPPRG--YVSIKASKDG-------------ILRQVVPDYEHLHDA 665 T S NA+NGIEP Y +K DG I R + D L D Sbjct: 469 GTISLAFADNASNGIEPAFSWFYNRVKRMPDGSKKNYTVEDHAYRIYRSMGNDVSKLPDY 528 Query: 666 YELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFG 725 + E+ D ++ +V + +ID +IS N + + P + + A+K G Sbjct: 529 FVSALEISAID-HMLMVAAVAPYIDAAISKTVNV------AEEYPYEDFKNLYMEAWKKG 581 Query: 726 VK--TLYYQN 733 +K T Y N Sbjct: 582 LKGITTYRPN 591 >UniRef50_C6P0N4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0N4_9PROT Length = 981 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 124/541 (22%), Positives = 221/541 (40%), Gaps = 86/541 (15%) Query: 224 SCVLIECGDSLDSINATSSAIVKYVSQRA-------GIGINAGRIRALGSPIRGGEAFHT 276 +C + GD++ N I + Q A G+G + IR G+ ++G + + Sbjct: 118 NCFVQPVGDAISGTNDGKPGIYDALQQAAETMRRGGGVGYDFSSIRPEGAHVKGTNSRAS 177 Query: 277 GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYG 336 G I + + F + ++ G R GA H ++E + K+ +R+ + Sbjct: 178 GPISYMRVFDRSCETVESAGARRGAQMGVLRCDHPDIEKFISAKDQ-----GDLRNFNIS 232 Query: 337 VQINKLMYTRLLKGEDITLF-SPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKA 395 V + + + K E+ L S + +A +E+ + +Y K V+A Sbjct: 233 VGVTDALMQAVEKDEEFELVHSAEPSTAIKEAGATRREDGKWIYRK-----------VRA 281 Query: 396 VELFSLMMQ---ERASTGRIYI------QNVDHCNTHSPFDPAIAPVRQSNLCLEIALPT 446 +L+ ++ + A G ++I N+ +C + +N C E LP Sbjct: 282 TDLWKQIIASTYDHAEPGVLFIDLMNRDNNLSYCEI----------IEATNPCAEQPLP- 330 Query: 447 KPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRG 506 P + ++ + F+ A + + ++L +AVR LD +LD +P+P ++ Sbjct: 331 -PYGCCCLGSIDLTRMVKNPFSKHAGFDYEPFKQLVRVAVRMLDNVLDVTAWPLPEQQQE 389 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 A +R +G+G L G RY +A ++ AS +LA E+G P Sbjct: 390 AKNKRRIGLGFTGLGDALVMMGLRYDTDAARAFASDITRIMRDEAYLASVDLAVERGKFP 449 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 +L D Y + P + +++ I+ HG+RNS L ++ P+ T S Sbjct: 450 ----------LLDADKYLSAPRFASRLP-----DEIKDKIRKHGIRNSHLLSIAPTGTIS 494 Query: 627 Q--ISNATNGIEPPRG--YVSIKASKDG-------------ILRQVVPDYEHLHDAYELL 669 NA+NGIEP Y K DG + +Q D HL ++ Sbjct: 495 LAFADNASNGIEPAFSWFYTRKKRMMDGTTKDYPVEDHAWRVFKQQGGDVSHLPPSFVTA 554 Query: 670 WEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT-AYKFGVKT 728 E+ D ++++V + +ID SIS N P+ +P + KDL T A+K G+K Sbjct: 555 LEISAID-HMKMVAAVAPYIDTSISKTVNV-PADYP------YEDFKDLYTEAWKAGLKG 606 Query: 729 L 729 L Sbjct: 607 L 607 >UniRef50_D1CDG6 Ribonucleoside-diphosphate reductase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDG6_THET1 Length = 811 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 154/667 (23%), Positives = 257/667 (38%), Gaps = 128/667 (19%) Query: 118 HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 H +ED E + ID R K +Y ++ + + +++ VA Sbjct: 13 HTIEDLERE----VQALIDSGRATKLEGYREKIFLDRYARKDPNGTPLEHYPEEMWLRVA 68 Query: 178 ACLFSNYPR-ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR-QFSSCVLIECG-DSL 234 + + P E + Q+ RFYD + F+ I+SG + + +C +I DS+ Sbjct: 69 KAIAAVEPNPEAQRQWTLRFYDILQGFRFVPGGRILSGAGSGAEVTYYNCFVIPSPEDSV 128 Query: 235 DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTG-CIPFYKHFQTAVKSCS 293 + I + + + G+G+N +R G+ I+ +G C + K Sbjct: 129 EGIFRNITTAAHIMRRSGGVGVNLSSLRPRGAYIKTVNGTSSGPCSWAILYSDMTGKVII 188 Query: 294 QGGVRGGAATLFYPMWHLEVESLLVLK-NNRGVEGNRVRHMDYGVQINKLMYTRLLKGED 352 QGG R GA + H ++E + K N G + H + V ++ + K Sbjct: 189 QGGSRRGALMIMLDDDHPDIEEFVEYKRKNPG----HIDHANLSVAVSDAFMEAVKK--- 241 Query: 353 ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRI 412 D+P D + +++ D RK A A G + Sbjct: 242 -------DLP-------WDLKWQGKVWKTIRARDLWRKIAESAWAY--------AEPGLV 279 Query: 413 YIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI 472 +I + + F+ +R N C E LP +C L A NL A Sbjct: 280 FIDRYNKRSNTWYFEN----IRCVNPCGEQGLPP------------WGVCNLGALNLLAF 323 Query: 473 N---------NLDELEELAILAVRALDALLDYQDYPIP----AAKRGAMGRRTLGIGVIN 519 + ++L A +A+R LD ++D YP P A K GA RRT G+G + Sbjct: 324 VKHIDGETYFDFEDLANTARVAIRFLDNVIDATVYPFPENEEAQKHGA--RRT-GLGTMG 380 Query: 520 FAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILP 579 A L K G +Y A L + + I+ AS +LA E+G P F+ Y +G Sbjct: 381 LADVLIKLGVKYGSPEAEPLVERIYRTIRDAAYDASADLAAEKGPFPKFDRDKYMQG--- 437 Query: 580 IDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPR 639 + ++L E ++ I+ G+RN+ L P+ T+S ++ +GIEP Sbjct: 438 --EFIRELP-----------EEIQAKIRRQGIRNAVLLTQAPTGTTSSLAGVNSGIEPVF 484 Query: 640 GYVSIKASKDGILRQVVPDYEHL--HD-AYELLWEMPGN--------------DGYLQLV 682 +V+ + + G EHL H A E + PG + ++++ Sbjct: 485 AFVTKRRDRLG---------EHLLYHPLAQEWMDAHPGKPLPDYFVSSADLTPEEHIRIQ 535 Query: 683 GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDL----LTAYKFGVK--TLYYQNTRD 736 ++QK+ D SIS N P ++D+ + AY G K T Y Q +RD Sbjct: 536 AVVQKYTDSSISKTVNG----------PEDNTVEDVERLYMLAYDTGCKGITYYRQGSRD 585 Query: 737 GAEDAQD 743 +A D Sbjct: 586 AVLEAVD 592 >UniRef50_B3SZX1 Putative Ribonucleotide reductase, barrel domain protein n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZX1_9ZZZZ Length = 817 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 136/592 (22%), Positives = 240/592 (40%), Gaps = 120/592 (20%) Query: 186 RETRLQYVKRFYDAVSTFKISLPTPIMSGV--RTPTRQFSSCVLIEC-GDSLDSINATSS 242 ++ R + K+FY + F+ + IM G T ++C ++ DS++SI T Sbjct: 92 KKLRDTWEKKFYYILEDFRFTPGGRIMHGAGREDITTTLNNCYVVGIQDDSINSIYRTIE 151 Query: 243 AIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAA 302 + G G + +R G I+G G + F F + +Q G RG Sbjct: 152 EEARTYKYGGGCGHDLSVLRPSGDAIKGTGGESCGPVGFMNLFSENTNTIAQHGRRGA-- 209 Query: 303 TLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVP 362 +++L RV H D I K + +K DI + S++ Sbjct: 210 ---------NMQTL------------RVDHPD----IEKFIE---IKTGDIHMVKYSNIS 241 Query: 363 GLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR---------IY 413 L F + E + + + +D + K +KA +L++ +++ ++ I Sbjct: 242 VLLTHRFMEAVENDSEF-DLKWNDQVYKT-IKARQLWNKIIEHAHTSAEPGLLFWDTMID 299 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL---- 469 N ++C +P+ +N C E LP + C L + NL Sbjct: 300 YHNAEYC----------SPLVSTNPCAEQPLP------------DGGCCNLGSINLERFV 337 Query: 470 -GAIN-NLDELEELAILAVRALDALLDY--QDYPIPAAKRGAMGRRTLGIGVINFAYYLA 525 G N +DE ++ +A R LD ++DY + + + + K A R +G+G++ L Sbjct: 338 DGEGNFMIDEFKDTVGIATRFLDNVIDYNLERHALESQKDNATKDRRIGLGILGLGDMLV 397 Query: 526 KHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKK 585 + G +Y A + + + + S ELA E+G+ P F+ Y K Sbjct: 398 RMGIKYDSDDAIQTVEQVMQIFRDGAYETSVELANEKGSFPSFDWAGYRKSQF------- 450 Query: 586 DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP--PRGYVS 643 I N P + L IK +G+RNST+ + P+ + + ++ T+GIEP Y Sbjct: 451 ----IKNLPRN-----LNNKIKENGIRNSTVLTVPPTGSGAIVARVTSGIEPIFATSYTR 501 Query: 644 IKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYL----------------QLVGIMQK 687 DG + +Y+ H + L+ GND L ++ G++QK Sbjct: 502 RVKKNDG-FGKTFNEYKVYHPIIKKLF---GNDENLPDYVISAHDIDPYSRVKMQGVIQK 557 Query: 688 FIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDG 737 +ID SIS+ N V ++ + +TAYK G+K T+Y + +R+G Sbjct: 558 YIDSSISSTVNLKED------VTLETVADIYMTAYKTGLKGITVYREGSREG 603 >UniRef50_D0J9D2 Ribonucleoside-diphosphate reductase n=2 Tax=Blattabacterium RepID=D0J9D2_BLASP Length = 571 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 135/581 (23%), Positives = 220/581 (37%), Gaps = 139/581 (23%) Query: 194 KRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAG 253 K+F++ + + TP+M + T SC GDS+ I + + G Sbjct: 64 KKFFNILWKGWLIPSTPVMVNLGTEKGLPISCFSGRVGDSMYEIYRKNLEMAILSKHGGG 123 Query: 254 IGINAGRIRALGSPIRGGE-AFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLE 312 + IR++GSPI+ G G IPF K + +A+ + QG R GA ++ + H E Sbjct: 124 TSYDFSLIRSVGSPIKNGTLGTSDGIIPFVKSYDSAIIASKQGSTRRGAVAIYLNIEHQE 183 Query: 313 VESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQ 372 L ++ +G + ++ GV ++ ++L Sbjct: 184 YPEFLKIREPKGDINRQCHNVHQGVILSNSFMEKVL------------------------ 219 Query: 373 EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP--FDPAI 430 K+ K L+ ++ER TG Y+ D+ N + P + Sbjct: 220 -----------------KKNGKERSLWINTLKERVKTGEPYLFFKDNANRNLPENWKKNG 262 Query: 431 APVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALD 490 + SNLC EI LPT DE+ + +C LS+ NL + + + A+ LD Sbjct: 263 LKIHHSNLCSEIMLPT-------DESHTL-VCCLSSLNLYKYVEWKDTQTV-FYAILFLD 313 Query: 491 ALLDYQDY--------PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHK 542 A+L Q++ I A R A R LG+G + + YL + + LTH Sbjct: 314 AVL--QEFINKGKNIKGIEDAVRFAEKSRALGLGALGWHSYLQSEMIPFISVKSEILTHD 371 Query: 543 TFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEAL 602 F I+ KA+ LAKE G W Sbjct: 372 IFGKIRSESQKATQYLAKEYGESEW----------------------------------- 396 Query: 603 RESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPDYEH 661 +I T G RN TL A+ P+ +S++++ + G+EP + + G+ + P E Sbjct: 397 --NIGT-GRRNLTLMAMAPNRSSAKLAGGLSQGVEPLAANIYVDDDAKGMHIRKNPYLEK 453 Query: 662 --LHDAYEL--LWEMPGND------------------------GYLQLV---GIMQKFID 690 + Y L +WE N+ L+L+ I QK+ID Sbjct: 454 ILIKSGYNLPEVWEQIANEKGSCLGLTGLSEKEKNVFLCFKEINQLELIKQASIRQKYID 513 Query: 691 QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYY 731 Q S N + + P + + K L A+K G+K+LYY Sbjct: 514 QGQSINLAFHQN------TPAKFINKVHLEAWKIGLKSLYY 548 >UniRef50_A9WCH6 Ribonucleoside-diphosphate reductase n=3 Tax=Chloroflexus RepID=A9WCH6_CHLAA Length = 822 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 130/628 (20%), Positives = 254/628 (40%), Gaps = 89/628 (14%) Query: 151 LEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPR-----ETRLQYVKRFYDAVSTFKI 205 L+ +YL++N G++ E+ + ++ VA + + R E + +RFY ++ Sbjct: 19 LKKRYLLKNE-HGDVIETPETMFWRVAETIAAVDARYGASAEQVEERAERFYHLMTQGYF 77 Query: 206 SLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALG 265 +P + P Q S+C ++ D+L SI T G G + R+R Sbjct: 78 EPNSPTLMNAGRPLGQLSACFVLPIDDNLTSIYETLKHQALIHQSGGGTGFSFSRLRPRN 137 Query: 266 SPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGV 325 +R +G + F + + ++ QGG R GA H ++ + K + Sbjct: 138 DVVRSTMGVASGPVSFMDVYNHSTEAIKQGGTRRGANMGILRCDHPDILEFITCK----L 193 Query: 326 EGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKD 385 + ++ + + V I + + E+ L +P G A ++ + T Sbjct: 194 DTTKITNFNISVAITDAFMRAVERDEEYDLINPRTGLGQ----IASRDGLKHPLTGEVLV 249 Query: 386 DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALP 445 + + R++A +F L++Q +TG + +D N ++P P + +N C E Sbjct: 250 PAGQPMRLRARMVFDLIVQCAHATGEPGLFFIDRANEYNPV-PHLGEYEATNPCGE---- 304 Query: 446 TKPLNDVNDENGEIALCTLSAFNLG------AINNLDELEELAILAVRALDALLDYQDYP 499 +PL + +C L + NLG + + L ++ + R LD ++D YP Sbjct: 305 -QPLLAYD-------VCNLGSINLGKFVTDAGTIDWESLRDVVHESTRFLDNVIDANHYP 356 Query: 500 IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELA 559 + + + R +G+GV+ +A L + G Y+ A +L + I AS +LA Sbjct: 357 LEQITQLSQRIRRIGLGVMGWADMLVRLGIPYNSAQAIDLARQVMRFIDEESKVASEQLA 416 Query: 560 KEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSAL 619 +E+G P + + + P T + D P LRN ++ + Sbjct: 417 RERGPFPEWEYSIWG----PDATCARRPDGSRIRPQRL-------------LRNCNVTTV 459 Query: 620 MPSETSSQISNATNGIEP------------------PRGYVSIKASKDGI----LRQVVP 657 P+ T S I+ ++GIEP + +V+ +A ++G L + + Sbjct: 460 APTGTISIIAGCSSGIEPLFAIAFWRYQADTRMLDINQDFVA-QAKREGWYSDELMERIA 518 Query: 658 DYEHLHD-----AYELLWEMPGN---DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKV 709 D H+H + + +W + + ++++ Q++ D +IS N FP Sbjct: 519 DTGHIHHPEVPASVQRVWVTAHDIAPEWHVRMQAAFQEYTDSAISKTIN-----FPHEAT 573 Query: 710 PMQQLLKDLLTAYKFGVK--TLYYQNTR 735 P Q+ + A++ G K T+Y +R Sbjct: 574 P-DQVREAYELAFRLGCKGITVYRDGSR 600 >UniRef50_A8LK99 Ribonucleoside-diphosphate reductase n=25 Tax=Bacteria RepID=A8LK99_DINSH Length = 765 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 129/533 (24%), Positives = 208/533 (39%), Gaps = 87/533 (16%) Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRT--PTRQFSSCVLIECGDSLDSINATSSAIVKYVS 249 + +FY A+ FK I +G T F+ V+ D + I + Sbjct: 52 WEPKFYAALEDFKFLPAGRITAGAGTERSVTLFNCFVMGTVPDDMGGIFEGLKEAALTMQ 111 Query: 250 QRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMW 309 Q GIG + IR G+ ++G A +G + F + ++ G R GA Sbjct: 112 QGGGIGYDFSTIRPKGAAVKGVAADASGPLSFMDVWDAMCRTIMSAGSRRGAMMATMRCD 171 Query: 310 HLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFF 369 H ++E+ + K++ R+R + V + + +K + G +D F Sbjct: 172 HPDIEAFIAAKSDPA----RLRMFNVSVLVTD-AFMEAVKAD-----------GSWDLVF 215 Query: 370 ADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQ---ERASTGRIYIQNVDHCNTHSPF 426 D V+A +L++ +M+ E A G I+I ++ N S Sbjct: 216 ----------------DGKVYHTVEARDLWNKIMKATFEYAEPGVIFIDRINAANNLSYC 259 Query: 427 DPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDE--LEELAIL 484 + + +N C E LP + G I L L + G LDE LEEL Sbjct: 260 ET----IAATNPCGEQPLPPYGACLL----GSINLSRLISDPFGEGAALDEAALEELVAT 311 Query: 485 AVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTF 544 AVR +D ++D +P+ A A +R +G+GV A L G RY +A T + Sbjct: 312 AVRMMDNVVDASRFPLEAQAAEARAKRRIGLGVTGLADALLMVGLRYGSEAAARQTERWL 371 Query: 545 EAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRE 604 I AS +LA E+GA P F Y L + + + D +R Sbjct: 372 HRIARAAYLASVQLATEKGAFPLFEADAY-------------LQSGTMQTMDAD---VRA 415 Query: 605 SIKTHGLRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKA--SKDGILRQVVPDYEH 661 +I HG+RN+ L+++ P+ T S + N ++GIEP Y + KDG + E Sbjct: 416 AIAEHGIRNALLTSIAPTGTISLYAGNVSSGIEPVFAYSYTRKVLQKDGSRTE-----EE 470 Query: 662 LHDAYELLWEMPGNDG----------------YLQLVGIMQKFIDQSISANTN 698 + D LW D ++++ QK++D SIS N Sbjct: 471 VVDYAVQLWREKFGDADLPDHFVNAQTLAPLDHVRMQAAAQKWVDSSISKTIN 523 >UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Methanomicrobia RepID=A0B8R8_METTP Length = 688 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 115/548 (20%), Positives = 204/548 (37%), Gaps = 128/548 (23%) Query: 118 HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 ++L E ++ ++ D+ S A++ L+ +YL ++ G + E+ ++ VA Sbjct: 95 YILYRQRRSEIREAKHYLGVADDLKLSVNAIEVLKKRYLKRDEF-GNVVETPGEMFERVA 153 Query: 178 ACLFSNYPR------ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG 231 + + + R + R K+F + + +P + P Q S+C ++ Sbjct: 154 SAVSAVERRYEGDADDAR----KKFLSMMRSLSFLPNSPTLMNAGLPLGQLSACFVVPVE 209 Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS 291 DS+ I + G G + R+R G +R +G + F + F A Sbjct: 210 DSIAGIFDALKYMALIHQSGGGTGFSFSRLRPKGDVVRSTGGIASGPVSFMRIFDAATDV 269 Query: 292 CSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 QGG R GA + H ++ + K+ G++ Sbjct: 270 IKQGGRRRGANMGILRVDHPDITEFIACKDRGGMDN------------------------ 305 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIR---------KQRVKAVELFSLM 402 ++ A EEF R + E+D S+ + A +L +M Sbjct: 306 -------------FNISVAITEEFMR---QCERDGSVELINPRTGEATGEMSARDLMVMM 349 Query: 403 MQ---ERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEI 459 R G ++I D N P P I + +N C GE Sbjct: 350 ATYAWRRGDPGVVFI---DRINALHPV-PGI--IEATNPC-----------------GEQ 386 Query: 460 ALCTLSAFNLGAIN----------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMG 509 L + NLG++N + D LEE LAVR LD ++D +P+ + + Sbjct: 387 PLLPFESCNLGSVNLSRMVERGEISWDRLEETVRLAVRFLDDVIDANRFPLKQIEDATLR 446 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 R +G+GV+ FA L + G Y+ A + + I + S L +E+G+ P F Sbjct: 447 TRKIGLGVMGFAEMLIQLGVSYASQDALRIAEELMAFITKTAREESCALGRERGSFPLFE 506 Query: 570 ETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS 629 E++ K W+A +RN+T++ + P+ T S I+ Sbjct: 507 ESSLKK-----------------------WDA---------MRNATVTTIAPTGTISIIA 534 Query: 630 NATNGIEP 637 ++GIEP Sbjct: 535 GTSSGIEP 542 >UniRef50_C1A6X4 Ribonucleoside-diphosphate reductase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6X4_GEMAT Length = 859 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 111/514 (21%), Positives = 210/514 (40%), Gaps = 81/514 (15%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPR----ETRLQYV-KR 195 +T S A LE +YLV+++ +G+ E + ++ VA + R + +Q + + Sbjct: 12 VTLSANARTVLEKRYLVKDK-SGKPVEKPEDMFWRVATTVAEADRRYGASDGAVQAIAEE 70 Query: 196 FYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDS----INATSSAIVKYVSQR 251 FY ++ + +P + P Q S+C ++ D+L + I T ++ Sbjct: 71 FYFLMTQRRFEPNSPTLMNAGRPLGQLSACFVLPVDDALSNGQSGIYDTLRSMALIHQSG 130 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 G G + R+R+ GS +R +G + F + + + + QGG R GA + H Sbjct: 131 GGTGFSFSRLRSRGSMVRSTTGVASGPVSFMQLYDASTDAVKQGGTRRGANMGILRVDHP 190 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFAD 371 +V + K + ++ + + V I T+ + DA AD Sbjct: 191 DVMEFIACKEDL----TKITNFNISVGIT----TKFM-----------------DAVKAD 225 Query: 372 QEEFERLYTKYEKDDSIRKQ---RVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 Y+ D + K+ ++A E++ M+ TG + +D N ++P P Sbjct: 226 --------ANYDLVDPVSKKVTGELRAREVWDKMILGAWRTGEPGVFFIDEANRYNPV-P 276 Query: 429 AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG-----AINNLDELEELAI 483 + +N C E +PL + +C L + N+G + + + + Sbjct: 277 HLGDYEATNPCGE-----QPLLAYD-------VCNLGSVNVGHYVSNGVVDWEAMRRDIA 324 Query: 484 LAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKT 543 L+ LD ++D YP+P + R +G+GV+ FA L + G Y + K Sbjct: 325 LSTHFLDNIIDVNKYPLPEIDALSKRIRRIGLGVMGFADMLVRLGIPYDSAEGVEMGRKV 384 Query: 544 FEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALR 603 E + K S LA+E+GA P + ++ + P +T +D + P+ Sbjct: 385 MEFLDVEGKKESERLARERGAFPEWAQSIWG----PDETCARDANGQRIRPMQL------ 434 Query: 604 ESIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637 LRN ++ + P+ T S I+ ++G+EP Sbjct: 435 -------LRNCNVTTVAPTGTISIIAGCSSGLEP 461 >UniRef50_Q120H3 Ribonucleotide reductase large subunit n=1 Tax=Polaromonas sp. JS666 RepID=Q120H3_POLSJ Length = 784 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 132/566 (23%), Positives = 236/566 (41%), Gaps = 83/566 (14%) Query: 224 SCVLIECGDSLDSINATSS-AIVKYVSQRA-------GIGINAGRIRALGSPIRGGEAFH 275 +C + GDS+ N I+ + + A G+G + IR +G+ ++G ++ Sbjct: 83 NCFVQPVGDSMSGSNQDGQPGIMDALRESAETMRRGGGVGYDFSSIRPVGARVKGTDSKA 142 Query: 276 TGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK-----NNRGVEGNRV 330 +G + + + F ++ G R GA + H ++E + K + G++ Sbjct: 143 SGPVSYMRVFDRMCQTVESAGARRGAQMGVMRVDHPDIEMFIDAKKTPDFSQMGLDKKDA 202 Query: 331 RHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFA------------DQEEFERL 378 + V+ N+ + L+ TL + + + D F D E E Sbjct: 203 DGLLDLVRKNQ-GFGWSLRSAFATLSNFNISVAVTDEFMNAVVNDSDFDLVHDAEPVEAC 261 Query: 379 YTKYEKDDSIR--KQRVKAVELFSLMMQER---ASTGRIYIQNVDHCNTHSPFDPAIAPV 433 TK D R + VKA+E+++ +M+ A G ++I ++ N + Sbjct: 262 PTKVCTDGKARFVYRTVKAIEIWTKIMRNTYYGAEPGVLFIDRINQDNNLR----YCEVI 317 Query: 434 RQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALL 493 + +N C E LP + N + + F L A + D L ++ AV LD +L Sbjct: 318 KATNPCGEQTLPPYGCCCLGSPN--LTRFVSNPFTLMASFDFDGLSKVVAKAVEMLDKVL 375 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 D +P+P A +R +G+G A +A G RY + E ++ Sbjct: 376 DKTHWPLPQQASEAANKRRIGLGHFGLADAMAMLGIRYDSQQGADFAAHVSEVLRDSAYM 435 Query: 554 ASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 AS LAK GA P+F+ Y L T+ L E ++++I+ +G+RN Sbjct: 436 ASVNLAKTLGAFPFFDAEKY----LEEGTFASRLP-----------EKIKDAIRMYGIRN 480 Query: 614 STLSALMPSETSSQI--SNATNGIEPPRGYVSIKASKDGIL----RQV--VPDYEHLH-- 663 S L ++ P+ T S NA++GIEP S++ ++ ++ RQ+ + DY + Sbjct: 481 SHLLSIAPTGTISMAFGDNASSGIEP---IFSLRQQRNKMMADGSRQIFELEDYAYRQFK 537 Query: 664 ---------DAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL 714 D + +M D +L+++G + +ID +IS N P+ +P QQ+ Sbjct: 538 LSKGEDAKSDVFVTAMQMTVAD-HLRVLGAVAPYIDSAISKTVNV-PADYPFED--FQQV 593 Query: 715 LKDLLTAYKFGVK--TLYYQNTRDGA 738 D A++ G+K T Y N GA Sbjct: 594 YMD---AWRMGLKGITTYRPNDMIGA 616 >UniRef50_A5EVD2 Ribonucleotide reductase, alpha subunit n=30 Tax=root RepID=A5EVD2_DICNV Length = 573 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 138/573 (24%), Positives = 219/573 (38%), Gaps = 95/573 (16%) Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQR 251 + +RF+ ++ S +PI S SC GDS+ I T++ + Sbjct: 71 FEQRFFHYLARGYYSFSSPIWSNFGLARGLPISCFGSYIGDSIYDIMRTTAEVGMMSKIG 130 Query: 252 AGIGINAGRIRALGSPIR-GGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWH 310 G G IR GS IR G++ G F K F T + SQG R G + + H Sbjct: 131 GGTSAYFGAIRPRGSDIRDNGKS--DGSFNFSKLFDTVIDVISQGTSRKGQFAGYIDIEH 188 Query: 311 LEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFA 370 ++E L + EGN ++ M YGV I+ + G+ Sbjct: 189 GDIEEWLDIH----TEGNPIQLMYYGVCISHQWLAEMKAGDS------------------ 226 Query: 371 DQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP--FDP 428 E R++ K ++Q ++ TG Y+ D+ N P + Sbjct: 227 ---EKRRIWAK--------------------VLQRKSETGIPYLFFKDNANAGRPDVYKD 263 Query: 429 AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL---GAINNLDELEELAILA 485 P+ SNLC EI LP E +C LS+ NL N D +E L Sbjct: 264 LNLPIYASNLCTEIMLPAS--------EEESFVCCLSSMNLLYYEEWKNTDAVE----LL 311 Query: 486 VRALDALL-----DYQDYP-IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNL 539 V LDA++ D P + A+R AM R LG+GV+ + YL + +A Sbjct: 312 VYFLDAVMTEFIEKSADLPFLERARRFAMRHRALGLGVLGWHSYLQSQHLPFDSLAAMQK 371 Query: 540 THKTFEAIQYYLLKASNELAKEQGACP----WFNETTYAKGILPIDTYKKDLDTIAN--E 593 ++ F+ +Q L AS LA+ G + T + P + L +++ E Sbjct: 372 NNEIFQLLQRKTLSASRTLAEHLGEPEILRGYGRRNTTLMSVAPTKSSSFILGSVSPSVE 431 Query: 594 PLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILR 653 PL ++ + +N L AL+ A G++ + SI + + Sbjct: 432 PLKSNYHVKDLAKIKTTYKNPFLVALL----------AEKGLDTETTWESILLNDGSV-- 479 Query: 654 QVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQ 713 Q +PD A + +Q QK+IDQ S N P P + Sbjct: 480 QHLPDLSDEEKAIFKTFSEINQLSIIQQAAQRQKYIDQGQSINLMIHPD------TPTRD 533 Query: 714 LLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLV 746 + + LTA + GVK++YYQ++ A+ +L+ Sbjct: 534 INQLYLTAAELGVKSIYYQHSMSAAQRFNRNLL 566 >UniRef50_Q3SMN2 Ribonucleoside-diphosphate reductase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMN2_THIDA Length = 600 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 126/542 (23%), Positives = 216/542 (39%), Gaps = 72/542 (13%) Query: 187 ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQ--FSSCVLIECGDSLDSINATSSAI 244 + R + RFY + F+ I++G + R F+ V+ E D ++ I Sbjct: 45 DARALWADRFYALLDDFRFLPGGRILAGAGSGHRVTLFNCFVMGEIADDIEDIFEALKEG 104 Query: 245 VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL 304 + G+G + +R G+ + +G + F + + G R GA Sbjct: 105 ALTMQHGGGVGYDFSTLRPAGTIAQATGTIASGPVSFMHIWDAMCATVLSTGARRGAMMA 164 Query: 305 FYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGL 364 H ++E+ + K + V +RH + VQ++ + D L P L Sbjct: 165 TLRCDHPDIEAFVDAKRDPAV----LRHFNLSVQVSDAFIAAVDADADWPLVFP-----L 215 Query: 365 YDAFFADQEEFERLYTKYEKDDSIRKQR-VKAVELFSLMMQ---ERASTGRIYIQNVDHC 420 D AD R +T R R V+A L+ +++ + A G +++ ++ Sbjct: 216 RDGEPADGAVVRRHWTGSTTAVPCRVLRTVRARALWQRILRAAYDTAEPGVLFVDTINRD 275 Query: 421 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE 480 NT + + + +N C EI LP D+ N + ++ F A +L L + Sbjct: 276 NTLAGRET----LTTTNPCGEIPLPAYGACDLGSLN--LTAFVVAPFAADARLDLAALGD 329 Query: 481 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 A LAVR LD ++D YP+ A R A +R +G+G+ A L G Y A L Sbjct: 330 AAALAVRFLDDVIDVSRYPLQAQAREARFKRRIGLGITGLADALVLLGLDYDSEPARQLA 389 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYA----KGILPIDTYKKDLDTIANEPLH 596 + ++ +AS +LA+E+G P + + G LP + Sbjct: 390 ERAMRTVRDAAYRASIDLAREKGGFPALERSAFLASGFAGRLPPE--------------- 434 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKASKDGILRQV 655 +R+ I G+RNS L A+ P+ T S ++ N ++GIEP + +AS+ R + Sbjct: 435 -----IRDGIARDGIRNSHLLAIAPAGTISLLANNLSSGIEP---IFAAEASR----RIL 482 Query: 656 VPDYEH----LHDAYELLWEMPGNDG---------------YLQLVGIMQKFIDQSISAN 696 PD + + D LLW G G +L + +Q +D +IS Sbjct: 483 QPDGSYRSHAVSDYACLLWRAHGGVGQPPALVEAQQLDPVAHLAMQAALQPAVDNAISKT 542 Query: 697 TN 698 N Sbjct: 543 IN 544 >UniRef50_A7IYE5 Putivate ribonucleotide reductase n=5 Tax=root RepID=A7IYE5_9CAUD Length = 865 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 62/238 (26%), Positives = 114/238 (47%), Gaps = 3/238 (1%) Query: 203 FKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR 262 F+ + PT + +G+ + S C +++ D++ SI ++ + G+GI +R Sbjct: 147 FQPATPTFLNAGLLDAGKPVS-CFILDVQDTMGSIGRIVQDSLQLSKRGGGVGIGFSNLR 205 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 G+PI+G E +G IP K + + +Q G R GA ++ H ++ + L K Sbjct: 206 EAGAPIKGREGQASGVIPVMKILEDSFSYSNQLGARQGAGAVYLNAHHPDILAFLDTKRE 265 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 E R++ + GV + + + + E + LFSP D+ +Y ++ E +Y + Sbjct: 266 NADEKIRIKTLSLGVIVPDVTFRLAKESEPMALFSPYDINKVYGKSLSEFSVTE-MYDTW 324 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 KDD I K + A +LF + + + +G Y+ D N +P P I ++ SNLC+ Sbjct: 325 LKDDRIAKTFIDARKLFQTIAEVQFESGYPYLMFDDAANRGNP-APNIGRIKSSNLCV 381 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 76/322 (23%), Positives = 134/322 (41%), Gaps = 39/322 (12%) Query: 439 CLEIALPTKPLNDVND----ENGEIALCTLSAFNLGAINNLD--ELEELAILAVRALDAL 492 C EI P+ P D + G C L + N+ ++ LD + A + L+ + Sbjct: 539 CSEIFQPSSPSEFSEDSFFTKTGRDISCNLGSLNVARLSALDTDDFHTAVKDAYKFLNQV 598 Query: 493 -LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYL 551 + + P RG R +G+G +N L + G Y+ A + + + + Sbjct: 599 AVQTEIGSSPTVVRGNRESRAIGLGQMNLHGALIELGLDYNSQEARDWFEWYMMRVTFSV 658 Query: 552 LKASNELAKEQGACPWFNETTYAKGILP---------IDTYKKDLDTIANEPL--HYDWE 600 + AS + A+E G+ E + I+ ID + + N + Y+W Sbjct: 659 ISASVDKAEEMGSGFKGAEGSRWGDIISGHRDRAMALIDRITASGNAMENSDVAWSYEWL 718 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQV-VPDY 659 L E + HG+ N L A+ P+ + S I++AT I P V ++ K+G L +V P Y Sbjct: 719 RLLERFRLHGIYNQNLQAIPPTGSISYINHATASIHPVTSPVEVR--KEGKLGRVYYPQY 776 Query: 660 -------EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQ 712 E + AY + G + + + + ++DQ +S T + P + + Sbjct: 777 GVTNENVESIDSAYAI-----GPNPIIDMYAVASPWVDQGMSL-TLFFPDTATTRDINRA 830 Query: 713 QLLKDLLTAYKFGVKTLYYQNT 734 Q+ A+K G+K+LYY T Sbjct: 831 QIY-----AHKKGLKSLYYIRT 847 >UniRef50_Q2LW62 Ribonucleoside-diphosphate reductase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LW62_SYNAS Length = 551 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 96/437 (21%), Positives = 174/437 (39%), Gaps = 52/437 (11%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF---SNYPRETRLQYVKRFYDAVSTF 203 A+ L +YL+++ G + E+ + L+ VA + +N P + + FY+ +++ Sbjct: 11 ALLVLRERYLIRDE-AGTLLETPEELFRRVACSVSQGENNDPEGRSAEMEEAFYEMMTSL 69 Query: 204 KISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRA 263 + +P + P Q ++C ++ DSLDSI + K G G + R+R Sbjct: 70 EFLPNSPTLMNAGRPLGQLAACFVLPVEDSLDSIFDSVKLTAKIHQTGGGTGFSFSRLRP 129 Query: 264 LGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNR 323 ++ +G + F + F A ++ QGG R GA + H ++ + +K + Sbjct: 130 KNDVVKSTMGVASGPVSFIRVFNCATEAIKQGGTRRGANMGILRIDHPDIMEFVAIKRDP 189 Query: 324 GVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE 383 + + + V I + D+ L +P TK Sbjct: 190 A----ELTNFNLSVAITDEFMRSYEENRDVALINPR--------------------TKKA 225 Query: 384 KDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIA 443 +V A EL + + ++G + +D N +P P + + +N C E Sbjct: 226 AG------KVNARELLRFIAEAAWASGEPGVIFLDAINRANP-TPHVGEIEATNPCGE-- 276 Query: 444 LPTKPLNDVNDENGEIALCTLSAFNLGAI---NNLD--ELEELAILAVRALDALLDYQDY 498 P P C L + NL I +D L++L L VR LD +++ Y Sbjct: 277 QPLLPYES----------CCLGSINLSRIVRNGGIDWQRLQKLTHLGVRFLDDVVEVSTY 326 Query: 499 PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNEL 558 P + G R +G+GV+ FA+ L + G Y A + I+ ASN L Sbjct: 327 PSEEIRAMTSGNRKIGLGVMGFAHLLIRLGIPYDSPDAERTGGEIIRLIERESKIASNRL 386 Query: 559 AKEQGACPWFNETTYAK 575 A+++G P F + + + Sbjct: 387 AEKRGPFPNFKGSVWDR 403 >UniRef50_UPI00004BA6C5 truncated ribonucleoside-diphosphate reductase 2, alpha subunit n=1 Tax=Staphylococcus epidermidis RP62A RepID=UPI00004BA6C5 Length = 969 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/328 (22%), Positives = 147/328 (44%), Gaps = 16/328 (4%) Query: 119 LLEDYTEEEFKQMDTFIDHDRDMTF---SYAAVKQLEGKYLVQNRVTGEIYESAQFLYIL 175 + +DY+EE ++ +D+ F S+ A + Y ++ R + E + ++ Sbjct: 62 VFKDYSEETLLEL---LDYAYSFGFEFQSFMAASKFYDTYALKTRDKSQWLEDFEQHNVI 118 Query: 176 VAACLFSNYPRETRLQYVKRFYDA--VSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDS 233 V+ L + KR+ A + T + + PT + +G R + +SC L D+ Sbjct: 119 VSLYLAGG-----DVDLAKRYIKAHTLQTVQTATPTYLNAG-RKQRGELASCYLFTMDDT 172 Query: 234 LDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCS 293 L+SIN S + + G+ +N R+R G+ ++G + G +P K + V Sbjct: 173 LNSINFIRSQVSQASKIAGGVAVNLTRLRGRGATLKGVKNVGKGIVPVAKLIEGEVSYAD 232 Query: 294 QGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDI 353 Q G R GA + ++H +V LL K E R+ + G+ + L + + +D+ Sbjct: 233 QLGQRAGAGAAYLNIFHSDVIELLNTKKVNADEDTRLATLSIGLIVPSLFFDLAKEDKDL 292 Query: 354 TLFSPSDVPGLYDA-FFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRI 412 +F P + + D Y K+ +++++ K ++ A E+ +L+ Q + +G Sbjct: 293 YMFEPYSIQEEFGKDVILDDININDWYDKFVENENVIKHKINAREMLNLIAQIQLQSGYP 352 Query: 413 YIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 YI D+ N + + + ++ SNLC+ Sbjct: 353 YIMYKDNANKNHALNE-LGEIKMSNLCV 379 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 20/188 (10%) Query: 454 DENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYP-IPAAKRGAMGRRT 512 DE G+ +C L++ N+ E+EE +RAL + + +P + R Sbjct: 781 DELGQDIICNLASLNMVKSIEEKEIEESIRTGMRALTFVANNSRIEHLPTVHKANKNNRA 840 Query: 513 LGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW-FNET 571 +G+GV++F AK+ RY + +L + + YY L S ++A E+ + F++T Sbjct: 841 VGLGVMSFHSMCAKNKIRYGSEESLDLLNVYCMMMDYYSLDESMKIAVERNDKFYGFDQT 900 Query: 572 TY------------------AKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 Y K + PI K++ P DW+ L + +GL N Sbjct: 901 DYKAKDGKEFGEYFYKNNRVTKNVEPITPKVKEIFKGIYIPTKEDWQRLAREVDKNGLYN 960 Query: 614 STLSALMP 621 S ++ P Sbjct: 961 SYRLSIAP 968 >UniRef50_A2DI13 Ribonucleoside-diphosphate reductase n=1 Tax=Trichomonas vaginalis RepID=A2DI13_TRIVA Length = 614 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 117/578 (20%), Positives = 219/578 (37%), Gaps = 92/578 (15%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAV 200 + F+ A+K ++ +YLV N G++YE+ + ++ VA L S + ++ K+F + Sbjct: 18 LPFTSNAIKVMKARYLVHNE-EGKVYETPEQMFTRVAKALAS--VETDKEKWTKKFEKVM 74 Query: 201 STFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGR 260 F+ ++ T S+CV++ DSLDSI T +GIG + Sbjct: 75 MNFEFIPAGRTLANAGAKTDLVSNCVVLHMEDSLDSIFQTLQDAALLQQAGSGIGFPFHK 134 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 +R G + +G + F + + A + Q G R GA + H ++ + K Sbjct: 135 LRPAGYKCKRTLGSSSGPLSFLRIYAEAFRIIQQHG-RHGANMAIMRVDHPDIIEFIHAK 193 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 G N ++ V R++K + P + + ++ R T Sbjct: 194 EQPGTYEN----FNFSVAFTDEFMERVIKND----------PSPWMCKWNGEKMAPRYIT 239 Query: 381 K--YEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNL 438 + + ++I+ + A EL + ++ + G +D N +P P + P+ N Sbjct: 240 RDAAGRVENIQPLTISAPELMNEIIHLAWTNGEPGCVFIDTVNKANPL-PGLGPIECCNP 298 Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN----------NLDELEELAILAVRA 488 C GE L + A NLGAIN + LEE+ A+R Sbjct: 299 C-----------------GEQFLHSGDACNLGAINLEKFVVDGKIDFKHLEEVTRTAIRM 341 Query: 489 LDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQ 548 LD ++ +P+ R +G+G++ A L Y + + +Q Sbjct: 342 LDNVVSLTKFPVQRVTDMFTNNRRIGLGIMGLADLLFLMKLPYDSEEGRACAEEVMKCVQ 401 Query: 549 YYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKT 608 + S L E+G+ P F ++ +A K Sbjct: 402 DSAIDESKRLGLEKGSFPNFEKSVWAD-------------------------------KV 430 Query: 609 HGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY--EHLHDAY 666 +RN++L+ + P+ ++S + + ++G+EP Y ++ + L + + +HL A Sbjct: 431 PAMRNTSLTNVAPTGSTSMLLDVSSGVEP---YFALAYRRGNCLAGPMKPFVNKHLQKAL 487 Query: 667 ELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRF 704 E D IM K ++ AN P + Sbjct: 488 E--------DCGCFTDKIMDKILETGTLANVTEVPEQL 517 >UniRef50_D1GPW6 Ribonucleoside-diphosphate reductase n=1 Tax=Staphylococcus aureus subsp. aureus TW20 RepID=D1GPW6_STAA0 Length = 1091 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/328 (22%), Positives = 147/328 (44%), Gaps = 16/328 (4%) Query: 119 LLEDYTEEEFKQMDTFIDHDRDMTF---SYAAVKQLEGKYLVQNRVTGEIYESAQFLYIL 175 + +DY+EE ++ +D+ F S+ A + Y ++ R + E + ++ Sbjct: 62 VFKDYSEETLLEL---LDYAYSFGFEFQSFMAASKFYDTYALKTRDKSQWLEDFEQHNVI 118 Query: 176 VAACLFSNYPRETRLQYVKRFYDA--VSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDS 233 V+ L + KR+ A + T + + PT + +G R + +SC L D+ Sbjct: 119 VSLYLAGG-----DVDLAKRYIKAHTLQTVQTATPTYLNAG-RKHRGELASCYLFTMDDT 172 Query: 234 LDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCS 293 L+SIN S + + G+ +N R+R G+ ++G + G +P K + V Sbjct: 173 LNSINFIRSQVSQASKIAGGVAVNLTRLRGRGATLKGVKNVGKGIVPVAKLIEGEVSYAD 232 Query: 294 QGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDI 353 Q G R GA + ++H +V LL K E R+ + G+ + L + + +D+ Sbjct: 233 QLGQRAGAGAAYLNIFHSDVIELLNTKKVNADEDTRLATLSIGLIVPSLFFDLAKEDKDL 292 Query: 354 TLFSPSDVPGLYDA-FFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRI 412 +F P + + D Y K+ +++++ K ++ A E+ +L+ Q + +G Sbjct: 293 YMFEPYSIQEEFGKDVILDDININDWYDKFVENENVIKHKINAREMLNLIAQIQLQSGYP 352 Query: 413 YIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 YI D+ N + + + ++ SNLC+ Sbjct: 353 YIMYKDNANKNHALNE-LGEIKMSNLCV 379 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 74/330 (22%), Positives = 137/330 (41%), Gaps = 45/330 (13%) Query: 439 CLEI--ALPTKPLNDVN--DENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLD 494 C EI + + D N DE G+ +C L++ N+ E+EE +RAL + + Sbjct: 762 CTEIFQYMHVSDIKDYNEQDELGQDIICNLASLNMVKSIEEKEIEESIRTGMRALTFVAN 821 Query: 495 YQDYP-IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 +P + R +G+GV++F AK+ RY + +L + + YY L Sbjct: 822 NSRIEHLPTVHKANKNNRAVGLGVMSFHSMCAKNKIRYGSEESLDLLNVYCMMMDYYSLD 881 Query: 554 ASNELAKEQGACPW-FNETTY------------------AKGILPIDTYKKDLDTIANEP 594 S ++A E+ + F++T Y K + PI K++ P Sbjct: 882 ESMKIAVERNDKFYGFDQTDYKAKDDKEFGEYFYKNNRVTKNVEPITPKIKEIFKGIYIP 941 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETS--SQISNATNGIEPPRGYVSIKASKDGIL 652 DW+ L + +GL NS ++ P T S I+N ++ + P V + + Sbjct: 942 TKEDWQRLAREVDKNGLYNSYRLSIAPYRTQSISYITNCSSALTPVVDVVEKRKYGNSET 1001 Query: 653 RQVVPDYEHLHDAYELLW-------EMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 +P + + E +W ++P + + + + QK+IDQ +S F Sbjct: 1002 YYPMP-----YLSPETMWFYSPTAFDIP-QEHIINVAAVAQKWIDQGVST------ILFV 1049 Query: 706 SGKVPMQQLLKDLLTAYKFGVKTLYYQNTR 735 + ++ +L + A+ G+K+LYY + Sbjct: 1050 NSEIETNKLARLYAYAHDRGLKSLYYTRNK 1079 >UniRef50_C4NT50 Putative ribonucleoside-diphosphate redutase n=2 Tax=unclassified N4-like viruses RepID=C4NT50_9CAUD Length = 776 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 129/543 (23%), Positives = 217/543 (39%), Gaps = 101/543 (18%) Query: 195 RFYDAVSTFKISLPTPIMSGVRTP--TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRA 252 RFY+A+ FK I SG T F+ V+ DSLD I + Q Sbjct: 64 RFYNALYDFKFLPAGRINSGAGTGRNVTLFNCYVMGTIPDSLDGIFDMLKEAALTMQQGG 123 Query: 253 GIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLE 312 GIG + +R G+ ++G E+F +G + F + + K+ G R GA H + Sbjct: 124 GIGYDFSTLRPKGALVKGVESFSSGPLTFMDVWDSMCKTIMSAGSRRGAMMATMRCDHPD 183 Query: 313 VESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQ 372 + + K + R+R+ + V + D L ++D Sbjct: 184 IMEFVTAKQDP----LRLRNFNVSVLCTDEFMEAVAADSDWDL--------MFDG----- 226 Query: 373 EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQER---ASTGRIYIQNVDHCNTHSPFDPA 429 ++Y Q +KA EL+ ++ A G I+I ++ N + Sbjct: 227 ----KVY-----------QTIKAKELWETILWNTYNYAEPGVIFIDRINKENNLWFLETI 271 Query: 430 IAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG-----------AINNLDEL 478 A +N C E LP C L + NL A ++ L Sbjct: 272 AA----TNPCGEQPLPP------------YGACLLGSVNLAKHVVFPFVKGQAEIDMKAL 315 Query: 479 EELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 EE VR LD++++ +P+ A + A +R G+GV A L G RY + A N Sbjct: 316 EESVRTGVRILDSVVETSLFPLEAQRDEARFKRRQGLGVTGLADALFMTGHRYGNQQAVN 375 Query: 539 LTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYD 598 T I + + S ++AKE G P ++P++ +K + + + + Sbjct: 376 FTDTIMMNIAIWAYEESIQMAKEMGPAP---------CLVPLEAREKFIQSGFMQRMP-- 424 Query: 599 WEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEP---PRGYVSIKASKDGILR- 653 E +++ I G+RNS L ++ P+ T S + N ++G EP P+ Y + DG R Sbjct: 425 -EYIKDDILEWGIRNSHLLSVAPTGTISMYAGNVSSGGEPIFAPK-YQRKVTNDDGTKRT 482 Query: 654 QVVPDY------EHL--HDAYELLW----------EMPGNDGYLQLVGIMQKFIDQSISA 695 + V DY EH +D E +W ++ +D ++ + ++QK++D SIS Sbjct: 483 ETVYDYAVLKFEEHFGENDNPEAIWWWENYMATAQDLTPSD-HIVMQAVLQKWVDSSISK 541 Query: 696 NTN 698 N Sbjct: 542 TVN 544 >UniRef50_UPI0001923DF2 PREDICTED: hypothetical protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI0001923DF2 Length = 472 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 69/258 (26%), Positives = 107/258 (41%), Gaps = 9/258 (3%) Query: 129 KQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTG-EIYESAQFLYILVAACLFSNYPRE 187 +++ I +DRD F Y +K LE YL + T +I E Q + + VA + Sbjct: 221 RRLQNSIRYDRDYLFDYFGIKTLERSYLYKLHFTKFKIIERPQHMIMRVAIGIHGE---- 276 Query: 188 TRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKY 247 + V YD +S + TP + T Q SSC L D+++SI I Sbjct: 277 -DIDSVIETYDLISQKYFTHATPTLFNAGTRRAQMSSCFLQAIDDNIESIFEAVRDIAFT 335 Query: 248 VSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYP 307 GIG++ +R GS IRG +G +P K +QGG R G+ + Sbjct: 336 SKWAGGIGVHMSALRCRGSLIRGTNGIASGVVPLCILLNKLAKYINQGGRRNGSIACYLE 395 Query: 308 MWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDA 367 H ++ L+ N G + +R R + + + L R+ +L P PGL Sbjct: 396 PHHADIFDFCDLRKNTGNDDDRARDLYLALWVPSLFMKRVRDDLTWSLMCPDQCPGLNKV 455 Query: 368 FFADQEEFERLYTKYEKD 385 EE+ +LY YE + Sbjct: 456 H---SEEYVKLYEMYESE 470 >UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyrobaculum RepID=A3MX47_PYRCJ Length = 853 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 114/513 (22%), Positives = 201/513 (39%), Gaps = 82/513 (15%) Query: 190 LQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVS 249 ++ + +YD +++ K+ +P T F+SC ++ D L SI + V Sbjct: 176 VERARLYYDYITSLKLIPASPYWFNAWTSKEMFASCFILMIEDCLSSITHPGKRCIYDVL 235 Query: 250 QRAG--------IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGA 301 R+G +G + +R G +RG +G I F K F V+ QGG R GA Sbjct: 236 TRSGLIQQAGGGVGYDFSLLRPEGDVVRGSAGVASGPISFMKLFDANVEVIKQGGKRRGA 295 Query: 302 ATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLL---KGEDITLFSP 358 +WH ++ + K ++ +++ + V ++ + L K + L +P Sbjct: 296 QMGTLHVWHPDIRKFIKAKTGE-LKDVHLQNFNISVVVDDAFMEKALDVDKDPNYPLVNP 354 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQ---ERASTGRIYIQ 415 V + E R + KD ++ V A ELF +++ + G I+ Sbjct: 355 RIVVEKLGIKPIEVLELTR-EVQLPKDATV--GSVNAKELFREIVEGAWDSGDPGLIFKS 411 Query: 416 NVDHCNT--HSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI- 472 N++ N+ + D +N C E+ P D + +C L+ NL Sbjct: 412 NMNASNSLLYVNVDGDRYVWFGTNPCAEV-----PGADKD-------VCNLTHINLVKFV 459 Query: 473 ------NNLDE---------LEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGV 517 L+E L E A + VR LD +D + R +G+GV Sbjct: 460 KEGCSGRTLEEKLECIDWAGLAETARVGVRFLDDAVDISTTGMKDVDETYRKIRKIGLGV 519 Query: 518 INFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGI 577 + A L K Y+ A L ++ I L S ELA+E+G +F+++ YA+G+ Sbjct: 520 MGLAEMLIKLEIPYASWDAVTLVNRVLAWIYLNALDESAELARERGPFKYFHQSDYARGV 579 Query: 578 LPIDTY---------------------------------KKDLDTIANEPLHYDWEALRE 604 +P+ Y ++ LD +A L E Sbjct: 580 IPVLKYQDFVWSRWERVRAAYPPEYRELGDRLKAITYETRRWLDAMAKRFGKPTLAELSE 639 Query: 605 SIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637 +K G+RNS + ++ P+ +S ++ T+G+EP Sbjct: 640 KVK-GGVRNSVVMSVAPTGRTSILAGTTSGVEP 671 >UniRef50_C6QBB0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyphomicrobiaceae RepID=C6QBB0_9RHIZ Length = 809 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 125/557 (22%), Positives = 220/557 (39%), Gaps = 92/557 (16%) Query: 171 FLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP--TRQFSSCVLI 228 F + +AA + + ++ FY+A++ F I++G T F+ VL Sbjct: 38 FRRVALAAASAEKGGKRQQQKWAGTFYEAMADFGFQPAGRILAGAGTDRNVTLFNCFVLG 97 Query: 229 ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTA 288 E D L SI + + GIG + +R G+P++ A +G + F + Sbjct: 98 EIADDLSSIFESVKEAALTMQSGGGIGHDFSTLRPRGAPVKSIGADASGPVSFMDVWDAM 157 Query: 289 VKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLL 348 ++ G R GA H ++E+ + K + R+R+ + V + + Sbjct: 158 CRTIMSAGQRRGAMMATLRCDHPDIEAFIAAK----ADSQRLRNFNLSVLVTDAFMDAVR 213 Query: 349 KGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQ---E 405 + D P +D F+ ++Y + + A L+ +M+ + Sbjct: 214 R----------DAP--WDLIFSG-----KVY-----------KTIPARALWDQIMRATFD 245 Query: 406 RASTGRIYI------QNVDHCNTHSPFDP-AIAPVRQSNLCLEIALPTKPLNDVNDENGE 458 A G I+I N+ +C T S +P P+ CL L +N Sbjct: 246 YAEPGVIFIDRINAANNLQYCETISATNPCGEQPLPPYGACL--------LGSIN----- 292 Query: 459 IALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVI 518 +A F A ++ +LE AVR LD ++D YP+P + A +R +G+GV Sbjct: 293 LARLVEEPFTATAHVDIAKLEARVATAVRFLDNVIDISRYPVPQQAQEARAKRRIGLGVT 352 Query: 519 NFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGIL 578 A L G Y +A + IQ +AS LA E+GA P + Sbjct: 353 GLADALIFLGLPYGSAAAREQAARWMAIIQNAAYRASAALAAEKGAFPLY---------- 402 Query: 579 PIDTYKKDLDTIANEP--LHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGI 635 D + + P D + +RE+I +GLRN L+++ P+ T S ++ N ++GI Sbjct: 403 -------DANVVLTRPNITRLD-DDVREAIAANGLRNGCLTSIAPTGTISLLAGNVSSGI 454 Query: 636 EPPRGYV---SIKASKDGILRQVVPDYEH--LHDAYE---------LLWEMPGNDGYLQL 681 EP +V + + G + V D+ H DA+ + E ++ + Sbjct: 455 EPVFDFVFRRRVLSDGGGAEEETVEDFAHRAFRDAFGDDAVLPEAFVTAETLTPSEHVAM 514 Query: 682 VGIMQKFIDQSISANTN 698 +Q ++D +IS N Sbjct: 515 QATLQPYVDSAISKTIN 531 >UniRef50_A4IY36 Ribonucleoside-diphosphate reductase n=26 Tax=root RepID=A4IY36_FRATW Length = 590 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 146/648 (22%), Positives = 235/648 (36%), Gaps = 152/648 (23%) Query: 135 IDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA-ACLFSNYPRETRLQYV 193 ID RD S A + L Y +QN S Q+ + A A F + + Sbjct: 11 IDLSRDRELSEQAQQLLTNYYCLQNE------PSPQYAFARAAVAYSFGD------MNLA 58 Query: 194 KRFYDAVSTFKISLPTPIMSGVRTPTRQFSS----CVLIECGDSLDSINATSSAIVKYVS 249 +R Y A + +P++S P + S C L DSL+ + SS + Sbjct: 59 QRIYAAAAKGWFMFASPVLSNAPLPGVKVKSLPISCFLSYVPDSLEGLIEHSSELRWLSV 118 Query: 250 QRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMW 309 + G+G + +RA+ G IPF + + QG R G+ + + Sbjct: 119 KGGGVGGHWSSVRAVSDKA-------PGPIPFMHTVDADMVAYRQGKTRKGSYAAYMDIS 171 Query: 310 HLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFF 369 H ++ L ++ G + ++ + V + + +D L P Sbjct: 172 HPDIIEFLGIRVPTGDVNRKCLNLHHAVNLTDDFMQAVANDQDWKLIDP----------- 220 Query: 370 ADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP---F 426 DD + +KA +++ +++ R TG Y+ +D N P Sbjct: 221 ---------------DDKTVRDVIKARKIWETILETRYRTGEPYLNFIDTANRALPKSQK 265 Query: 427 DPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILA- 485 D + ++ SNLC EI L V DE A+C LS+ NL DE ++ +++ Sbjct: 266 DLGLT-IKGSNLCNEIHL-------VTDEK-RTAVCCLSSVNL---ERYDEWKDTSLIKD 313 Query: 486 -VRALDALL----DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 +R LD +L D+ I A+ A R+LG+G + F YL H + A + Sbjct: 314 LIRFLDNVLQFFIDHAGDEISKARYSASRERSLGLGAMGFHSYLQLHRVPFESQRAKEIN 373 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 + F+ I+ L+ + L E+G P Sbjct: 374 EEIFKRIKEQALEETLILGAEKGEAP---------------------------------- 399 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP-------PRGYVSIKASKDGILR 653 + G RN+ L A+ P+ SS I N + IEP R V +K+ L Sbjct: 400 ----DMAGTGRRNAHLLAIAPNANSSLILNTSPSIEPWKANAFTSRTRVGSHLNKNKYLE 455 Query: 654 QVVPDYEHLHDAYELLW-EMPGNDGYLQ--------------------------LVGIMQ 686 Q + E + E +W ++ N G +Q L G Q Sbjct: 456 Q---ELEKIGKNTEEVWSDIITNGGSVQQLDFLSKELKEVFKTAIEMDQDWLVYLGGERQ 512 Query: 687 KFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNT 734 K++ Q S N FP+G L K A+K+G K LYY T Sbjct: 513 KYLCQGQSLNV-----FFPAG-ASRGYLHKVHFNAWKYGCKGLYYLRT 554 >UniRef50_A1TJY2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=3 Tax=Comamonadaceae RepID=A1TJY2_ACIAC Length = 1226 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 99/358 (27%), Positives = 148/358 (41%), Gaps = 51/358 (14%) Query: 369 FADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 F D ++ ERL T +R E F+ +Q+ G + +V + H+ FD Sbjct: 629 FEDADKAERLATALSG-----YRRALNREPFTATVQDVLPDGHEDVYDVTVADCHA-FDA 682 Query: 429 AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN----NLDELEELAIL 484 V C E LP+ D+ G I L G + D Sbjct: 683 NGLCVHN---CGEQPLPSYGCCDL----GPIILPRFVRHPFGFAGEPAFDFDAFAASVAT 735 Query: 485 AVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTF 544 VRALD +LD +P+P + + +R +G+G LA RY + + + Sbjct: 736 QVRALDNVLDVTFWPLPQQRAESAAKRRIGVGFTGLGNTLAMLRLRYDTDAGRAMAMRIA 795 Query: 545 EAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRE 604 E ++ AS ELAKE+G P F+ A G L T+ L AL+E Sbjct: 796 ECMRDAAYAASVELAKEKGVFPKFD----AAGYLAPGTFASRLPA-----------ALQE 840 Query: 605 SIKTHGLRNSTLSALMPSETSSQ--ISNATNGIEPPRG--YVSIKASKDGILRQ------ 654 +I+THG+RNS L ++ P+ T S NA+NGIEPP Y K DG + Sbjct: 841 AIRTHGIRNSHLLSIAPTGTVSLAFADNASNGIEPPFSWTYTRRKREADGSTSEYAVEDH 900 Query: 655 -------VVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 + D L D + +MP G++ ++ +Q FID +IS N P+ +P Sbjct: 901 AWRLYGALGGDVNALPDYFVSALQMPAA-GHIAMMEAVQPFIDTAISKTVNM-PADYP 956 >UniRef50_Q8V6N4 Ribonucleotide reductase n=2 Tax=Haloviruses RepID=Q8V6N4_9VIRU Length = 805 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 127/574 (22%), Positives = 202/574 (35%), Gaps = 111/574 (19%) Query: 163 GEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQF 222 G I E A L+ VA + + F + T + +P + T Q Sbjct: 52 GNIIEGADDLFRRVAENVAGAEEDGDFDTWADEFEHQMKTLRFMPNSPTLMNAGTDMNQL 111 Query: 223 SSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIR--GGEAFHTGCIP 280 S+C +IE D ++ I T+ G+G +R G+ I GGEA +G + Sbjct: 112 SACFVIEPRDDMEDIFETAQQAALIFQSGGGVGYAFSHLRPKGAFINSTGGEA--SGPVS 169 Query: 281 FYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQIN 340 F + F QGG R GA H ++ +V K N G N + V Sbjct: 170 FMRVFDETCNQVKQGGKRRGAQMGILRADHPDIGRFIVAKRNEGEFAN----FNISVATT 225 Query: 341 KLMYTRLLKGEDITLFSP-SDVPGLY-------------------DAF------------ 368 + E TL+ P +D Y DAF Sbjct: 226 DNFIEAVDAQESYTLYDPETDYEEPYTVRELSAHFYSPEYQDNPRDAFDDGEGAVVEENL 285 Query: 369 ---FADQEEFE------RLYTKYEKDDSIRKQRVKAVEL-----FSLMMQERASTGRIYI 414 +AD+ E E L K+E + +R + + +EL + +M+ G + Sbjct: 286 WRDYADEIECELYGERVTLREKWEGHEGLRLEVGEPMELPAAFIWDVMIDGAWRNGEPGL 345 Query: 415 QNVDHCNTHSPFDPAIAP---VRQSNLCLEIAL---------------------PT---- 446 N + N FD P + +N C E L PT Sbjct: 346 FNFEESNRQHSFDVEEYPEFRMNATNPCAEQMLVEYEACNLGHINLSLMLSEDAPTYDEF 405 Query: 447 --KPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAK 504 L DV +G+++ + + +EL+ R LD ++ D+PIP Sbjct: 406 LSDKLEDV--ASGDLSTREAVEWYFETAVDFNELDRTIEAGTRFLDNVVTQSDFPIPEIT 463 Query: 505 RGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA 564 G R +G+G++ FA L + G Y + + I AS+ LA E+GA Sbjct: 464 ERVGGMRKIGLGIMGFAQMLYQMGVPYGTQDSYEVARCVMRYIDRRGTWASHRLALERGA 523 Query: 565 CPWFNETTYAKGILPIDTYKKDLDTIANEPLHYD-WEALRESIKTHG------LRNSTLS 617 +++++ YA +P YD W A R + +RN ++ Sbjct: 524 FSYWDKSKYA------------------DPTEYDEWFAARTGLDPEDWAGGFPIRNHNIT 565 Query: 618 ALMPSETSSQISNATNGIEPPRGYVSIKASKDGI 651 + P+ T+S I N T G EP + K + I Sbjct: 566 TIAPTGTTSMIGNTTGGCEPAYNVANFKNVSEDI 599 >UniRef50_B9KZV2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZV2_THERP Length = 589 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 107/467 (22%), Positives = 173/467 (37%), Gaps = 89/467 (19%) Query: 184 YPRETR-LQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSS 242 +PR R + ++FY+ ++T + TP + T Q +C +I DSLD I Sbjct: 48 FPRGPRSAEIAEKFYELMTTLRFLPNTPALINAGTQLGQLFACFVIPVPDSLDGIFGAVR 107 Query: 243 AIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAA 302 K G G + +R G +R +G + F + F A + VRGGA Sbjct: 108 DAAKIQQTGGGTGFSFSHLRPRGDLVRSTRRPSSGAVSFIRIFDVASDVIATESVRGGAN 167 Query: 303 TLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVP 362 H +V + K N + ++ V + ++ +I L +P Sbjct: 168 MAVLRCDHPDVREFIDAKRNPAL----FSRFNFSVLVTDDFLRAAIERREIALINPRT-- 221 Query: 363 GLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQ---ERASTGRIYIQNVDH 419 GL A + A ELF M+ E G ++ + Sbjct: 222 GLPFA------------------------QANAGELFDAMVDAAWEVGDPGLLFYDRIQR 257 Query: 420 CNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------- 472 N PA+ P+ +N C E+ P P C L + NL A Sbjct: 258 DNAV----PALGPLEATNPCGEV--PLHPWE----------ACVLGSLNLRAFIVERGDR 301 Query: 473 NNLDE--LEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530 LDE L+E A LA+R LD +++ YP + R +G+G++ FA L Sbjct: 302 AFLDEAGLQESARLALRFLDNMVEVSRYPKVEIETICRANRKVGLGIMGFADLLLALRIP 361 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTI 590 Y + + + +Q ++AS LA+E+G P F + YA Sbjct: 362 YGSDESVAVADRVMGLVQAAAVEASRRLAEERGPFPNFPISRYAA--------------- 406 Query: 591 ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637 EP RN+T++ + P+ + S I+ ++GIEP Sbjct: 407 RGEPPR---------------RNATVTTVAPTGSISIIAGCSSGIEP 438 >UniRef50_Q196Z5 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR1_IIV3 Length = 630 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 149/674 (22%), Positives = 250/674 (37%), Gaps = 148/674 (21%) Query: 135 IDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVK 194 ID R+ F +++L+ Y+ ++ + + +F +I C + P + Sbjct: 4 IDESRNNLFDALGLQRLKDSYMKEDESSPQ----ERFAFIARQFCA-DDEP------LAQ 52 Query: 195 RFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGI 254 R YD +S +S +P +S RT +C L D T+ ++ ++ + + Sbjct: 53 RLYDYMSQHWLSPSSPQLSFGRTKQGLPIACFLPYLHD-------TARGLIDTWAEVSEL 105 Query: 255 GINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVE 314 + G I IR + G IP + + + + QG R G+ + + H E+ Sbjct: 106 SMIGGGIGLGVG-IRQPDEKSVGIIPHLRTYDASCTAYKQGQTRRGSYAAYLDISHPEIL 164 Query: 315 SLLVLKNNRGVEGNRVRHMDYGVQI--------------------NKLMYTRLLKGEDIT 354 S L + G ++ ++ GV + + T L + +T Sbjct: 165 SFLNTRRVGGDHNYKLLNLHNGVNVPDSFMKKIWILSTLAPFVKMDPCPTTETLFKKAVT 224 Query: 355 LFSPSDVPGLYD--------AFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQER 406 S G D A A+Q + + + K+ +KA EL+ ++ R Sbjct: 225 TLKDSRYFGADDRWLGEVSFAALAEQLDVVNRWDLIDPHTGKVKETIKATELWERIILTR 284 Query: 407 ASTGRIYIQNVDHCNTHSP-FDPAIA-PVRQSNLCLEIALPTKPLNDVNDENGEIALCTL 464 A TG YI +D N P F + +RQSNLC E+ LPT + A+C L Sbjct: 285 AETGEPYIHWIDTSNRALPQFQKNLGLSIRQSNLCSEVVLPT--------DETRTAVCCL 336 Query: 465 SAFNLGAINNLDELEELAILAVRALDALLDY-QDYPIPAAKRG---AMGRRTLGIGVINF 520 ++ NL + E+ + LD +L Y D+ P KR A R +GIG + F Sbjct: 337 ASLNLDYFDKWCNNEQFYLDVATYLDNVLQYFIDHAPPTLKRAVHSARSERAIGIGALGF 396 Query: 521 AYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPI 580 YL A + K F+ I +L + + EL + +G P Sbjct: 397 HSYLQSKMVDIESLPAYLINKKIFKTISSHLERVNLELGELRGEAP-------------- 442 Query: 581 DTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI-SNATNGIEPPR 639 D + G R S ++A+ P+ TSS I N + EP R Sbjct: 443 -------DCVGT-----------------GRRFSHMTAIAPNATSSIIMGNTSPSCEPFR 478 Query: 640 G-----------YVSIKASKDGILRQVVPDYEHLHDAYELLW-EMPGNDGYLQ------- 680 +V+ +L + +PD + A E +W + +DG +Q Sbjct: 479 ANIYKQDTISGSFVTYNKHLKRLLEERIPD----NQARERVWSSIKMHDGSVQHLNQLTV 534 Query: 681 -------------------LVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTA 721 L QK+IDQS S + ++P + + K L A Sbjct: 535 QEKKVFKTWPEINQLSLVMLAADRQKWIDQSQSTSLFFNPDE------RISYVHKIHLKA 588 Query: 722 YKFGVKTLYYQNTR 735 + G+KTLYY +R Sbjct: 589 WLHGLKTLYYFRSR 602 >UniRef50_Q67KQ2 Ribonucleoside-diphosphate reductase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KQ2_SYMTH Length = 776 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 86/387 (22%), Positives = 154/387 (39%), Gaps = 33/387 (8%) Query: 194 KRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAG 253 +RFY + +P +G T Q S+C ++ GDSL I T G Sbjct: 57 ERFYQLMDRQDFMPNSPTFTGAGTALGQLSACFVLPVGDSLPEIYETMKQAALIHQTGGG 116 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 G R+R G +R + +G + F + + + ++ QGG R GA + H ++ Sbjct: 117 TGFAFSRLRPAGDVVRSSQGVASGPVSFLRVYNASTEAIKQGGTRRGANMGILRVDHPDI 176 Query: 314 ESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQE 373 + K + ++ + + V I L KG + L +P + E Sbjct: 177 LQFIESK----ADITQITNFNISVAITDAFMEALEKGTEYELINPR-----------NGE 221 Query: 374 EFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPV 433 +L K ++ +++ TG I +D N +P + + + Sbjct: 222 VTGKLSAKL---------------VWDKLVENAWKTGEPGIVFIDRINRRNPNN-HVEVI 265 Query: 434 RQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALL 493 +N C E LP P N + +A + + A + + L E+A A R LD ++ Sbjct: 266 EATNPCGEQPLP--PYGSCNLGSINLANFVKNPYTDRAEVDWERLGEVARTATRFLDNVI 323 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 D YP+P A+ R +G+G++ +A L + G Y A L ++ I+ L+ Sbjct: 324 DANKYPLPQIAEKALRDRRIGLGIMGWAEMLVQMGLPYDSEEAVALGNRVMTFIKQKALE 383 Query: 554 ASNELAKEQGACPWFNETTYAKGILPI 580 S LA+ +G P + + + K L + Sbjct: 384 ESMALAEVRGPYPEWEGSQWHKAGLKV 410 >UniRef50_Q2T3W9 Ribonucleotide reductase system n=37 Tax=Burkholderiales RepID=Q2T3W9_BURTA Length = 881 Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 138/621 (22%), Positives = 239/621 (38%), Gaps = 107/621 (17%) Query: 168 SAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVL 227 +A +Y VA + P E R + RF + + + + + + +C + Sbjct: 69 TADDIYRRVARGVAQAEPPELRDEIEARFVEHLQRGALGAGRIMSAAGSSIAATLINCFV 128 Query: 228 IECGDSLDSINATSSAIV--------KYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCI 279 GD + ++ + + + + G+G N IR G+ + + +G Sbjct: 129 QPVGDCIQGVDERGLPGIYVALLQAAETMRRGGGVGYNFSAIRPRGAYVHSTGSSASGPC 188 Query: 280 PFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQI 339 + F + ++ G R GA H ++ + K+++G R + + V + Sbjct: 189 SYIDVFDASCRTVESAGARRGAQMAVLDCDHPDLLEFIEAKHSKG----RWNNFNISVAV 244 Query: 340 NKLMYTRL---LKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSI---RKQRV 393 + L + + PS P L A + +DD + ++R Sbjct: 245 TDAFMNAVEQDLPWQLVHRAEPS--PALRAA-----------GDLHRRDDGMWVYAERRA 291 Query: 394 KAVELFSLMMQ---ERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN 450 +A+ + +M+ + A G ++I ++ N AI +R +N C E LP Sbjct: 292 RAI--WDKIMRSTYDVAEPGVVFISKMNDDNNLR----AIESIRATNPCGEQPLPA---- 341 Query: 451 DVNDENGEIALCTLSAFNLG--------------AINNLDELEELAILAVRALDALLDYQ 496 C L NL ++ + D L E VR LD +LD Sbjct: 342 --------YGCCNLGPLNLTRFVIDPFARLDGGESVFDWDALAERTRTQVRFLDDVLDVT 393 Query: 497 DYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASN 556 +P+P + A +R +GIG L G RY + + ++ +AS Sbjct: 394 LWPLPEQRHEAQQKRRIGIGFTGLGDTLVMLGLRYDAQEGRDFAARVAREMRDAAYRASV 453 Query: 557 ELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTL 616 ELA E+GA P F+ + Y L T+ L + +RE+I+ G+RNS L Sbjct: 454 ELACERGAFPLFDASRY----LEEGTFASRLP-----------DDIREAIRRDGIRNSHL 498 Query: 617 SALMPSETSSQ--ISNATNGIEPPRG--YVSIKASKDG-------------ILRQVVPDY 659 ++ P+ T S NA+NGIEP Y K DG + R++ D Sbjct: 499 LSIAPTGTVSLAFADNASNGIEPAFSWTYQRTKIMADGSRQTFAVEDYAYRLYRELGGDV 558 Query: 660 EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLL 719 + L + +M +D +L ++ +Q +ID SIS N P+ +P + L D Sbjct: 559 DALPGYFVSALQMSAHD-HLAMMAAVQPYIDTSISKTVNV-PADYPFDD--FESLYFD-- 612 Query: 720 TAYKFGVKTL--YYQNTRDGA 738 A+K G+K L Y N GA Sbjct: 613 -AWKSGLKGLATYRPNETLGA 632 >UniRef50_C4RH87 Ribonucleoside-diphosphate reductase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RH87_9ACTO Length = 611 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 132/591 (22%), Positives = 212/591 (35%), Gaps = 132/591 (22%) Query: 211 IMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRG 270 I++ T Q +SC ++ D L +I T G G + +R G+PI Sbjct: 81 ILNNCGTRQGQLASCFVLPVEDDLGAIFDTLKLAASCHRTGGGTGFDLTPLRERGAPIST 140 Query: 271 GEAF-HTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNR 329 EA +G + + F QGG GA + H +V + K G R Sbjct: 141 AEAAGSSGPVSWLHLFDAETGVVMQGGKMRGANLASLSVRHPDVFEFIDAKAVVG----R 196 Query: 330 VRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIR 389 + + + V ++ L+ G +I L SP V G Sbjct: 197 LANFNLSVTVDDAFMRTLIDGGEIDLVSP--VGGRP------------------------ 230 Query: 390 KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIAL-PTKP 448 ++RV A E++ + + TG + D N +P + P+R +N C E L P +P Sbjct: 231 RRRVPAAEIWRRISAQAWRTGDPGLLFTDMINRANPLLDRLGPIRTTNPCGEQTLYPYEP 290 Query: 449 LNDVNDENGEIALCTLSAFNLGAINNLD------ELEELAILAVRALDALLDYQDYPIPA 502 TL + NL A+ D LE AVR LD +D YP P Sbjct: 291 -------------STLGSVNLRAMTGPDGRLDTARLERTVEDAVRLLDNSIDASHYPDPR 337 Query: 503 AKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQ 562 A G R LG+GV+ FA L G RY A + + I+ + LA E+ Sbjct: 338 ITAMARGNRRLGLGVMGFADLLIALGVRYDSTRALAVVDEVGGRIRAVAEATTRRLAAER 397 Query: 563 GACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPS 622 G P F +P +D +RN ++ + P+ Sbjct: 398 GTFPNF------------------------DPARFD----------APVRNCAVTTIAPT 423 Query: 623 ETSSQISNATNGIEP----------------------------PRGYVSIKASKDGILRQ 654 T S ++ ++GIEP G V + ++ I + Sbjct: 424 GTISMVAGCSSGIEPRFAPIWRKNVLVDGGVSYVDEDLAADVCAHGGVDPEQARRLIRER 483 Query: 655 VV---PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPM 711 V P E + D Y ++PG + ++++ Q+ ID ++S N P + Sbjct: 484 PVTELPMPEPVRDRYRYAHDVPG-EWHVRIAAQWQRHIDNAVSKTVN-----LPR-DCSV 536 Query: 712 QQLLKDLLTAYKFGVK--TLYYQNTRD-------GAEDAQDDLVPSIQDDG 753 + + L +++ G K ++Y Q +R+ GA D P D G Sbjct: 537 DDVAEVLTASWRLGCKGVSVYRQGSREQDLQEVAGARTGTDRPTPLAGDAG 587 >UniRef50_A3EPA5 Ribonucleoside-diphosphate reductase n=3 Tax=Leptospirillum RepID=A3EPA5_9BACT Length = 732 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 111/536 (20%), Positives = 204/536 (38%), Gaps = 109/536 (20%) Query: 135 IDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYV- 193 ++ + + S A+K LE +YL ++ G + E+ + ++ +A + S+ + + +++ Sbjct: 1 MESNVTLNLSDNALKVLEKRYLGKDEA-GIVRENPEQMFRRIADAIASSNSQSSEREFLA 59 Query: 194 KRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAG 253 + +Y +++ +P + P Q S+C ++ GDS+ I T A G Sbjct: 60 EEYYRFMASLDFLPNSPTIMNAGRPLGQLSACFVLPVGDSMPEIFDTVKATALIHQTGGG 119 Query: 254 IGINAGRIRALGSPIR--GGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 G + R+R G+ +R GG+A +G + F K + + QGG R GA + H Sbjct: 120 TGFSFSRLRPKGAVVRSTGGQA--SGPVSFMKVINASTDAIKQGGTRRGANMGILRVDHP 177 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP--SDVPGLYDAFF 369 ++ + K ++ +V + + V I + + + + L +P +V G Sbjct: 178 DILEFIDCK----MDLTQVTNFNISVAITDVFMQAVKEDGEYDLIAPHNGEVVG------ 227 Query: 370 ADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPA 429 R++A E+F + + G + +D N +P Sbjct: 228 ----------------------RLRAREVFDKIAHNAWANGEPGLFFIDTANRANP---- 261 Query: 430 IAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN---------------N 474 P++ + + GE L + NLG+IN + Sbjct: 262 --------------TPSRWTYEATNPCGEQVLGPYESCNLGSINLERHVRSSATGKPEVD 307 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 + L LAVR LD ++D +PIP G R +G+G++ FA L + Y Sbjct: 308 WERLGRSVYLAVRFLDNVVDANRFPIPELAAVNQGTRRIGLGIMGFARLLMRLEIPYDSE 367 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP 594 + K I+ + S +LAK G P++ Sbjct: 368 EGLEMAEKVMSFIRDEAERTSQDLAKVHGPFPYY-------------------------- 401 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG 650 E I T RNS L + P+ T S I++ ++G EP + K DG Sbjct: 402 ---------EGIGTRK-RNSHLLTIAPTGTISMIADTSSGCEPEFSIIWYKNVMDG 447 >UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=Thermococcaceae RepID=Q5JJ43_PYRKO Length = 1746 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 16/209 (7%) Query: 462 CTLSAFNLGAINNLDE-------LEELAIL---AVRALDALLDYQDYPIPAAKRGAMGRR 511 C L++ NL D+ +E A + + LD +D +P+P R R Sbjct: 1308 CNLASINLAKFVKYDDEGKPYFDWDEYAYVIQKVAKYLDNAIDVNKFPLPEIDRNTKLTR 1367 Query: 512 TLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNET 571 +G+G++ A L K G Y+ + K E + +Y K S E AKE+G P + +T Sbjct: 1368 RIGVGMMGLADALFKLGIPYNSKEGFDFMRKATEYLTFYAYKRSVEAAKERGPFPLYEKT 1427 Query: 572 TYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA 631 Y G LP++ + I N P W+ L E IK +G+RN ++ P+ + S I++ Sbjct: 1428 RYKDGELPVEGFYH--REIWNLP----WDELVEEIKKYGVRNGMVTTCPPTGSVSMIADT 1481 Query: 632 TNGIEPPRGYVSIKASKDGILRQVVPDYE 660 ++GIEP V K+ G V P +E Sbjct: 1482 SSGIEPIFALVYKKSVTVGEFYYVDPVFE 1510 >UniRef50_Q0ILH0 NrdA (Fragment) n=1 Tax=Enterobacteria phage TuIa RepID=Q0ILH0_9CAUD Length = 105 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 7/109 (6%) Query: 656 VPDYEHLHDAYELLWEMP--GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQ 713 VP+ EH Y+ W++ GN YL V IM K++ QS SANT YDP+ F GKVPM Sbjct: 1 VPNIEHNMSLYDYAWKLAKKGNKPYLTQVAIMLKWVCQSASANTYYDPAVFEKGKVPMSV 60 Query: 714 LLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDL-VPSIQDDGCESGACKI 761 +L DLL + FG K LYY NTRDG+ +L P +D ACK+ Sbjct: 61 MLDDLLYFWYFGGKNLYYHNTRDGSGTDDYELETPKAED----CSACKL 105 >UniRef50_Q11ZE1 Ribonucleotide reductase large subunit n=2 Tax=Burkholderiales RepID=Q11ZE1_POLSJ Length = 858 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 115/524 (21%), Positives = 206/524 (39%), Gaps = 86/524 (16%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKIS 206 A +Q+ L++ G+ + + ++ VA + E R +Y + F+D + I Sbjct: 16 APQQVSIDVLLEKYAKGDEFTETE-IFARVAKGIAQAEQPELREKYERVFFDNMMRGAIG 74 Query: 207 LPTPIMSGVRTPTR-QFSSCVLIECGDSLDSINATS-SAIVKYVSQRA-------GIGIN 257 IMS T + ++C + GD++ ++ I + + + A G+G + Sbjct: 75 AGR-IMSAAGTGIKATLANCFVQPVGDAIQGVDTEGYPGIYEALREAAETMRRGGGVGYD 133 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 RIR GS ++G + +G + F + K+ G R GA + H ++ + Sbjct: 134 FSRIRPRGSVVKGTASSASGPCSYIDVFDASCKTVESAGARRGAQMGVMKISHPDILEFI 193 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFER 377 K G R ++ V + G+ D F A E E Sbjct: 194 TAKREVG------RWNNFNVSV-----------------------GIVDGFMAAVEANEM 224 Query: 378 LYTKYEKDDSIRKQR----------------VKAVELFSLMMQ---ERASTGRIYIQNVD 418 ++ + S+ +QR V A E++ +M+ + A G +++ ++ Sbjct: 225 WPLVHKAEPSVEQQRAGAYLRESDGLWVYREVPAAEIWDTVMKSCYDFAEPGIVFLDLMN 284 Query: 419 HCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTL--SAFNLGAINNLD 476 N S + + +N C E LP D+ G I L AF A + + Sbjct: 285 LDNNLS----YVETIEATNPCAEQPLPPYGCCDL----GPIILPKFVSRAFTERAAFDDE 336 Query: 477 ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 + + R LD +L +P+ ++ A +R +G G LA G RY+ Sbjct: 337 GFKAAVKIQTRFLDNVLSVTHWPLEQQRKEAEAKRRIGAGFTGLGDMLAMLGIRYNSIEG 396 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 + ++ +AS +LA E+G P F+ Y K T+ L Sbjct: 397 VEFSRHVALMMRDAAYEASIDLAIEKGPFPLFDADKYLKK----GTFASRLP-------- 444 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQ--ISNATNGIEPP 638 ++L++ I+ HG+RNS L ++ P+ T S NA+NGIEPP Sbjct: 445 ---KSLKDRIRRHGIRNSHLLSIAPTGTVSLAFADNASNGIEPP 485 >UniRef50_B1HS20 Ribonucleoside-diphosphate reductase n=28 Tax=Bacteria RepID=B1HS20_LYSSC Length = 866 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 103/399 (25%), Positives = 168/399 (42%), Gaps = 72/399 (18%) Query: 370 ADQEEFERLYTKYEKDDSIRKQR-VKAVELFSLM---MQERASTGRIYIQNVDHCNTHSP 425 D E+E++ K IR R +KA EL++L+ A G +I N + Sbjct: 426 GDVREWEKMGYK------IRTYRTIKAKELWNLINVCATYSAEPGIFFIDNANDMTNAKA 479 Query: 426 FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDE-------L 478 + ++ +N C E +PL ++C L+A NL N D L Sbjct: 480 YGQSVVA---TNPCGE-----QPL-------APYSVCNLAAVNLAQFANKDNQTVDYEAL 524 Query: 479 EELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 E + VR D ++D Y + + A+G R +G+GV+ A L K Y + N Sbjct: 525 RETVRVGVRMQDNVIDATPYFLEENRVQALGERRVGLGVMGLADLLIYCEKEYGSEAGNA 584 Query: 539 LTHKTFEAIQYYLLKASNELAKEQGACPWF-----NETTYAKGILPIDTYKKDLDTIANE 593 L + F+ I +AS ELAKE+G+ P+ ET + + + + Sbjct: 585 LVDEIFKTIAETAYEASTELAKERGSFPFLVGATDEETARLRKAFTETGFMEKM------ 638 Query: 594 PLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG--- 650 P H ++E I G+RNS L + P+ ++ + G+EP + ++ + G Sbjct: 639 PAH-----IKEQILATGIRNSHLLTVAPTGSTGTMVGVATGLEPYFSFTYYRSGRLGKFI 693 Query: 651 -ILRQVVPDYEHLH-DAYELLWEMP---------GNDGYLQLVGIMQKFIDQSISANTNY 699 + ++V +Y H +A E E+P + + + I+QK+ID SIS N Sbjct: 694 EVKAEIVKEYLDRHPEANE--QELPEWFVTAMELKPEAHADVQCIIQKWIDSSISKTVNA 751 Query: 700 DPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 P G +QQ+ K YK G K T+Y +RD Sbjct: 752 -----PKGYT-VQQVEKVYERLYKGGAKGGTVYVDGSRD 784 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 2/136 (1%) Query: 187 ETRLQYVKRFYDAVSTFKISLPTPIM--SGVRTPTRQFSSCVLIECGDSLDSINATSSAI 244 E R ++ ++FYD + + K ++ +G T F+ V+ DS + I+ + Sbjct: 161 EKRQEWFEKFYDQLVSLKFIPAGRVIYGAGSETDVTFFNCYVMPFVADSREGISDHRKQV 220 Query: 245 VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL 304 ++ +S+ G+G N +R + RG +G + + QGG R GA + Sbjct: 221 MEIMSRGGGVGTNGSTLRPRNTLARGVNGKSSGSVSWLDDIAKLTHLVEQGGSRRGAQMI 280 Query: 305 FYPMWHLEVESLLVLK 320 WH ++ ++ K Sbjct: 281 MLADWHPDIVEFIISK 296 >UniRef50_D2EFV5 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFV5_9EURY Length = 756 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 126/550 (22%), Positives = 221/550 (40%), Gaps = 108/550 (19%) Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEA-----FHTGCIPFYKHFQ 286 DSL++I+ T+ + + S G+GI+ +R P R F + F K + Sbjct: 105 DSLEAIHDTAKEMARTYSYGGGVGIDISIVR----PERSSSGIMQQDFRLASVSFMKLYS 160 Query: 287 TAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR 346 Q G R GA + + H ++ES + +K ++ VR+ + V++ Sbjct: 161 ITTGIIGQTG-RRGAWMITLDVTHPDIESFVTIKKDK----KSVRYANISVKV------- 208 Query: 347 LLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIR-KQRVKAVELFSLMMQE 405 YD F D E ++++T + K++ + K+ +KA++L+ + Sbjct: 209 ------------------YDDFM-DAVENDKIFTLHFKNEKVEFKKEIKALDLWKKRIDT 249 Query: 406 RASTGRIYIQNVDHCNTHSP--FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCT 463 +TG I D + SP +D +A ++ +N C E +PL + C Sbjct: 250 AVNTGDPGIMFWDRMKSESPTEYDEKMA-IKGTNPCSE-----QPLENY-------GACD 296 Query: 464 LSAFNLG----------AINNLDELEELAILAVRALDALLDYQDYPIPAAKRGA---MGR 510 L A NL A + + L++ VR LD +LDY Y A K A + Sbjct: 297 LGAINLDYFVKNQCTDKAEVDWENLDKTVRYGVRFLDNVLDYS-YNRHALKEQADETVYA 355 Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNE 570 R +G+G++ A L RY A + I+ S+ LA E+G+ P F Sbjct: 356 RRIGLGIMGLANMLISMNLRYDSDKAIEFVDSLMKKIKETAYDESSNLAVEKGSFPAFVA 415 Query: 571 TTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISN 630 + + + K LD + L + I +GLRN+ + + P+ + S ++ Sbjct: 416 EKHLQ-----RNFVKRLD-----------KKLLDKISKNGLRNACILTVAPTGSISSMAG 459 Query: 631 ATNGIEPPRGYVSIKASK---DGILRQVVPDYEHLHDAY---------ELLWEMPGNDGY 678 + GIEP + S+ +G + P + D + EL D + Sbjct: 460 VSGGIEPICALSYTRRSESLSEGKFEVLDPFVKRYMDKFKIRDKSTLPELFVTAHKIDPF 519 Query: 679 --LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNT 734 +++ +QK ID SIS+ N S + + K A+K G K T+Y + + Sbjct: 520 FRVKMQATIQKHIDSSISSTVNL------SADTDAETVDKIYRYAWKLGCKSITVYREGS 573 Query: 735 RDGAEDAQDD 744 +D A D+ Sbjct: 574 KDDILKATDE 583 >UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyrococcus RepID=Q9UYA0_PYRAB Length = 2122 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 16/209 (7%) Query: 462 CTLSAFNLGAINNLDE-------LEELAIL---AVRALDALLDYQDYPIPAAKRGAMGRR 511 C L++ NL DE +E A + + LD +D +P+P R Sbjct: 1691 CNLASINLAKFVKYDENGKPYFDWDEYAYVIQKVAKYLDNSIDVNKFPLPEIDYNTKLTR 1750 Query: 512 TLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNET 571 +G+G++ A L K G Y+ K E + +Y K S E AK++G P + +T Sbjct: 1751 RIGVGMMGLADALFKLGIPYNSEEGFKFMRKVTEYLTFYAYKYSIEAAKKRGTFPLYEKT 1810 Query: 572 TYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA 631 Y KG LP++ + I N P W+ L E IK +G+RN+ ++ P+ + S I++ Sbjct: 1811 GYPKGELPVEGFYH--PEIWNLP----WDKLVEEIKKYGVRNAMVTTCPPTGSVSMIADT 1864 Query: 632 TNGIEPPRGYVSIKASKDGILRQVVPDYE 660 ++GIEP V K+ G V P +E Sbjct: 1865 SSGIEPIFALVYKKSVTVGEFYYVDPVFE 1893 >UniRef50_Q2RP92 Ribonucleotide reductase large subunit n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RP92_RHORT Length = 786 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 117/500 (23%), Positives = 196/500 (39%), Gaps = 77/500 (15%) Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS 291 D +D I + + Q GIG + +R G+ +R + +G + F + + + Sbjct: 92 DRMDGIMEALTRAALTMQQGGGIGTDFSTLRPRGAKVRRTGSVSSGPLSFMEIWHAMCGT 151 Query: 292 CSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 GG R GA H ++ + + K G R+ + + V + + R + E Sbjct: 152 IMSGGARRGAMMGTMICDHPDLPAFITAKAQAG----RLTNFNVSVLVTD-AFMRAVD-E 205 Query: 352 DITLFSPSDVPGLYDA-FFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQ---ERA 407 D T VP A A E + YE R+ A L+ +++ + A Sbjct: 206 DATWDLGFSVPPADPARLVAVTERNGEPWYVYE--------RLSARALWEKIIRTTYDHA 257 Query: 408 STGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAF 467 G I+I V+ N + + + +N C E LP P D N +A+ F Sbjct: 258 EPGVIFIDRVNERNNLAYCET----ISCTNPCGEQPLP--PNGDCNLGCVNLAVLVRDPF 311 Query: 468 NLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKH 527 A + L E+A + VR LD +LD ++P+ + A +R LG+G++ L Sbjct: 312 TPQARFDDARLAEVAAIGVRFLDNVLDVSNFPVEDQAKEAQAKRRLGLGIMGLGNALQML 371 Query: 528 GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDL 587 G RY +A T + ++ +AS ELA E+G P + D Sbjct: 372 GLRYGSPAAIAETRRIMALLRDAAYRASAELAGERGPFPLY-----------------DR 414 Query: 588 DTIANEPLHYDW-EALRESIKTHGLRNSTLSALMPSETSS-QISNATNGIEPPRGYVSIK 645 D + P + + LR I GLRN + + P+ T++ +N ++G+EP G+ + Sbjct: 415 DQLLARPFIQELPDDLRAKIAEQGLRNGVMLTIAPTGTTAIYYNNVSSGLEPTFGWRYFR 474 Query: 646 ASKDGILRQVVPDYEH------------------LHDAYELLWEMPGN---------DGY 678 +LR PD H L A L +P + + + Sbjct: 475 K----VLR---PDGGHDEFAVIDAGFESWCRTRGLDPATAPLTGLPDSMVTALELSVEDH 527 Query: 679 LQLVGIMQKFIDQSISANTN 698 L++ Q+FID SIS N Sbjct: 528 LRMQAACQEFIDASISKTIN 547 >UniRef50_Q3ZZA0 Ribonucleoside-diphosphate reductase n=27 Tax=cellular organisms RepID=Q3ZZA0_DEHSC Length = 761 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 108/497 (21%), Positives = 188/497 (37%), Gaps = 74/497 (14%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN----YPRETRLQYVKRFYDAVST 202 A+ LE +YL +++ G+ E+ + ++ VA + P+ F++ ++ Sbjct: 26 AMCVLERRYLKKDK-QGKTTETVEDMFRRVARTIAMGELIYNPKADVRSREDEFFNLMTR 84 Query: 203 FKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR 262 + +P + Q S+C ++ DS++SI G G + R+R Sbjct: 85 LEFLPNSPTLMNAGRELGQLSACFVLPVDDSIESIFDAVKHTAMIHKSGGGTGFSFSRLR 144 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 + +G + F + F A QGG R GA + H ++ + K+ Sbjct: 145 PEQDRVGTTGGVASGPVSFMRAFDVATDVIKQGGTRRGANMAILSIDHPDIMKFVHAKDK 204 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 GV N + V I + G D L +P + E L Sbjct: 205 AGVLTN----FNLSVAITDKFMQAVKDGVDYDLLNPHN-----------GEVVSSL---- 245 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEI 442 A E+F+ ++ TG I +D N ++P P + + +N C E Sbjct: 246 -----------NASEVFNKIVHMAWKTGDPGIVFIDRINAYNP-TPQLGRIESTNPCGE- 292 Query: 443 ALPTKPLNDVNDENGEIALCTLSAFNLGAINNLD--ELEELAILAVRALDALLDYQDYPI 500 P P N G I L + + G N +D +L + AVR LD ++D +P+ Sbjct: 293 -QPLLPYESCN--LGSINLSRMVTVS-GGQNTVDYKKLSRVIKSAVRFLDNVIDVNKFPL 348 Query: 501 PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAK 560 P R +G+GV+ FA L + G Y+ ++ L + + K S+ELA Sbjct: 349 PQIDEMTKKSRKIGLGVMGFADMLLELGVPYNSENSIKLAEEIMCFVNDEAHKFSSELAV 408 Query: 561 EQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALM 620 E+G P + + Y K P +RN++ + + Sbjct: 409 ERGVFPAYRGSIYEKSGRP-------------------------------MRNASCTTIA 437 Query: 621 PSETSSQISNATNGIEP 637 P+ T S I+ ++GIEP Sbjct: 438 PTGTLSIIAGCSSGIEP 454 >UniRef50_A7HK53 Ribonucleoside-diphosphate reductase n=11 Tax=Thermotogaceae RepID=A7HK53_FERNB Length = 841 Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 101/435 (23%), Positives = 169/435 (38%), Gaps = 66/435 (15%) Query: 216 RTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFH 275 R S+C ++ DS++ I GIG N R+R GS + G Sbjct: 131 RNHLHMLSACFVVPVEDSIEGIFEAVKEYALITKAGGGIGSNFSRLRPKGSFVAGTHGQA 190 Query: 276 TGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDY 335 +G + F F +AV QG R GA + H ++E + K G +G +V Sbjct: 191 SGPVSFMHVFNSAVGVVEQGYRRRGALMGILNIDHPDIEEFITAK--EGNDGEKV----- 243 Query: 336 GVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKA 395 LK +I++ D L + D E + K+ K + +RVK Sbjct: 244 ------------LKFFNISVGITMDRQELLKLYMEDGE----IELKHPKCNG--SKRVKV 285 Query: 396 VELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDE 455 EL + + + TG + + N + P + + +N C Sbjct: 286 RELINKIAKNAWKTGDPGLAFLSEMNKYYAMYPEMT-IESTNPC---------------- 328 Query: 456 NGEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDALLDYQDYPIPAAKR 505 GEI L A NLG+I+ + + LAVR LD ++D +P+ ++ Sbjct: 329 -GEIGLAPYEACNLGSIDVAKFYMNGEFYWEAFAQATRLAVRFLDDVIDVNVFPLEKIRK 387 Query: 506 GAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGAC 565 R +G+G++ FA L Y+ + + SN+LA+ +G+ Sbjct: 388 AVTDSRRIGLGIMGFADLLYMMDIPYNSHEGRQFAADMTAYMAIHGHDESNKLAQLKGSF 447 Query: 566 PWFNETTYAKGILPIDTYKKD-LDTIANEPLHYDWEALRESIK--THGLRNSTLSALMPS 622 P F ++ Y Y++D A YD E L+E K G RN + + P+ Sbjct: 448 PLFEKSRY---------YREDEFAPFAMGMSKYDNE-LKEVFKESKKGKRNVAVLTIAPT 497 Query: 623 ETSSQISNATNGIEP 637 + S I++ ++G+EP Sbjct: 498 GSISNIADTSSGLEP 512 >UniRef50_B2A494 Ribonucleoside-diphosphate reductase n=16 Tax=cellular organisms RepID=B2A494_NATTJ Length = 752 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 90/389 (23%), Positives = 161/389 (41%), Gaps = 41/389 (10%) Query: 194 KRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI-NATSSAIVKYVSQRA 252 + F+D + +P + +Q ++C ++ DS++SI A +A + + S Sbjct: 58 QNFFDLMDNQYFMPNSPTLMNAGRELQQLAACFVLPIEDSMESIFEAIKNAALIHKSG-G 116 Query: 253 GIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLE 312 G G + +R + +G + F K F +A ++ QGG R GA + H + Sbjct: 117 GTGFSFSNLRPKNDIVLSTGGVASGPVSFMKVFNSATEAVKQGGTRRGANMGILRVDHPD 176 Query: 313 VESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQ 372 ++ + K + + + + + V I + + + + +L +P + + Sbjct: 177 IQEFITCKR----DSDEINNFNISVGITEEFMEAVKQDGEYSLKNPKNGQAV-------- 224 Query: 373 EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP 432 + ++A E+F +++ G I +D N ++P P I Sbjct: 225 ------------------KTLRAREVFDKIVEMAWGNGEPGIVFIDKMNENNP-TPHIGE 265 Query: 433 VRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDAL 492 + +N C E P P N G + L + N GA+ + L+E AV LD + Sbjct: 266 IESTNPCGE--QPLLPFESCN--LGSVNLSKM--VNNGAV-DYQLLKETVHTAVHFLDNV 318 Query: 493 LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLL 552 +D YP+P ++ + R +G+GV+ F L K Y+ A +L K I Sbjct: 319 IDANRYPLPEIEKTSKENRKIGLGVMGFGDMLFKLRIPYNSQEALDLAEKVMGYIDQESK 378 Query: 553 KASNELAKEQGACPWFNETTY-AKGILPI 580 S ELAKE+GA P F + Y KG PI Sbjct: 379 AKSQELAKERGAFPNFKGSIYDQKGEEPI 407 >UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus barophilus MP RepID=B5IVI5_9EURY Length = 1042 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 16/209 (7%) Query: 462 CTLSAFNLGAINNLDE-------LEELAIL---AVRALDALLDYQDYPIPAAKRGAMGRR 511 C L++ NL D+ +E A + + LD +D +P+P R Sbjct: 625 CNLASINLAKFVKYDDEGKPYFDWDEYAYVIQKVAKYLDNSIDVNKFPLPEIDYNTKLTR 684 Query: 512 TLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNET 571 +G+G++ A L K G Y+ + K E + +Y K S E AK++G P ++++ Sbjct: 685 RIGVGMMGLADALFKLGIPYNSKEGFDFMRKATEYLTFYAYKYSVEAAKKRGTFPLYDKS 744 Query: 572 TYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA 631 Y +G LP++ + I N P W+ L E IK +G+RN+ ++ P+ + S I++ Sbjct: 745 DYPEGKLPVEGFYH--REIWNLP----WDELAEEIKKYGVRNAMVTTCPPTGSVSMIADT 798 Query: 632 TNGIEPPRGYVSIKASKDGILRQVVPDYE 660 ++GIEP V K+ G V P +E Sbjct: 799 SSGIEPIFALVYKKSVTVGEFYYVDPVFE 827 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 109/288 (37%), Gaps = 39/288 (13%) Query: 197 YDAVSTFKISLP-TPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIG 255 Y + T +I +P TP + P S+C ++ D ++SI + + G G Sbjct: 244 YFRLMTNQIFMPNTPALINAGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKMGGGTG 303 Query: 256 INAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVES 315 +N ++R G + +G + F QGGVR GA +WH ++E Sbjct: 304 VNFSKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDIEK 363 Query: 316 LLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEF 375 + K + + N + + + V I + + L +G L +P Sbjct: 364 FIHAK-EKNIGTNVLSNFNISVGIWEDFWEALKEGRKYPLINP----------------- 405 Query: 376 ERLYTKYEKDDSIRKQRVKAV-ELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIA-PV 433 +R+ KA+ E + M +A G ++ D N + + A + Sbjct: 406 -------RTGKKVREVDPKALFEELAYMAWAKADPGVVFF---DVINRRNVLEKAKGQKI 455 Query: 434 RQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEEL 481 R +N C + T+ L E GEI + L F L N+D LE L Sbjct: 456 RATNPC--VVGDTRILT----EKGEIEIEKL--FELAKEANIDRLEVL 495 >UniRef50_A7I485 Ribonucleoside-diphosphate reductase n=6 Tax=Methanomicrobia RepID=A7I485_METB6 Length = 741 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 115/596 (19%), Positives = 213/596 (35%), Gaps = 142/596 (23%) Query: 195 RFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI--NATSSAIVKYVSQRA 252 RFY+A+ + + +P + T Q S+C + D++D I AI+ Sbjct: 43 RFYEAMISLRFLPNSPTLMNAGTEIGQLSACFTLPVPDTIDGIFDAMKEGAIIHKTG--G 100 Query: 253 GIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLE 312 G G N IR GSP++ + +G I F + F A QGG R GA +WH + Sbjct: 101 GTGYNFSHIRPEGSPVQSTDGVASGPISFMRVFNAATDVIKQGGRRRGANMGILNVWHPD 160 Query: 313 VESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF--FA 370 + + + K G + + V +N D F Sbjct: 161 ILAFISAKKKEG----EFSNFNISVMVN-------------------------DKFMDLV 191 Query: 371 DQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAI 430 + FE ++ +++ ++++ +++ G I D N H+P P + Sbjct: 192 AAKSFETVWLTKGGTG----EKITVGQIWNGIVEGIWKNGEPGILFYDEINRHNP-TPQL 246 Query: 431 APVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---NNLDE--LEELAILA 485 + +N C E P P C L + NL A DE L + + +A Sbjct: 247 GEIDTTNPCGE--QPLLPYES----------CVLGSINLAACVREGAFDEDLLRDTSRMA 294 Query: 486 VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFE 545 R LD +++ +PIP R +G+GV+ + G Y + Sbjct: 295 TRFLDLVIEKNVFPIPQIAEATRKTRKIGLGVMGVHDAMLMLGLSYDSEKGRAWCEWVMK 354 Query: 546 AIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRES 605 I ++ S+ LA++ G P + + + Sbjct: 355 VITETAIEESHRLAEKLGTFPAWQGSIW-------------------------------- 382 Query: 606 IKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV-PDYE---- 660 K + +RN+ ++ + P+ T S ++ ++GIEP + + + G + +V P ++ Sbjct: 383 -KDYEVRNAAMTTVAPTGTISLLAGCSSGIEPIFSFAYTRKNTVGKVFVIVNPVFKEALL 441 Query: 661 ----------------------HLHDA---YELLW-------------EMPGNDGYLQLV 682 H+H+ ++ W ++P + ++ + Sbjct: 442 HTLTGMGYAGDEREKKAGEVISHVHETGSMQDVAWLSAEFRGLFKTALDIPWRE-HILMQ 500 Query: 683 GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 QK++ SIS N G + LL A+K G+K T+Y +R+ Sbjct: 501 ACFQKYVHASISKTINM------PGSATKDDCAEALLMAWKLGLKGITIYRTGSRE 550 >UniRef50_O31875 Bsu nrdEB intein n=33 Tax=root RepID=NRDEB_BACSU Length = 1084 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 3/238 (1%) Query: 203 FKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR 262 ++ + PT + +G R + SC L+E GDSL+ I+ ++ G+ +N ++R Sbjct: 148 YQPATPTFLNAG-RKRRGEMVSCFLLEVGDSLNDISRAIDISMQLSKLGGGVALNLNKLR 206 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 A G I+ E G + K A + Q G R G+ ++ ++H ++ L K Sbjct: 207 AKGEAIKDVENATKGVVGVMKLLDNAFRYADQMGQRQGSGAVYLSVFHPDITDFLDTKKI 266 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 E RV+ + GV + + +D +F P V Y + D+ + +Y + Sbjct: 267 SADEDVRVKTLSIGVVVPDKFIELAREDKDYYMFYPHSVYKEYGQYL-DELDINEMYDEL 325 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 ++ +RK + A +L + R+ +G YI D+ N P + I+ V+ SNLC+ Sbjct: 326 VENPRVRKAKGNARKLLEQLAILRSESGYPYIMFADNVNKVHP-NEHISKVKFSNLCV 382 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 70/309 (22%), Positives = 136/309 (44%), Gaps = 30/309 (9%) Query: 451 DVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQD-YPIPAAKRGAMG 509 D DE G C L + N+ + + + +A+ +L + + PA R Sbjct: 782 DKEDEIGLDISCNLGSMNIVNVMSNQSIASTVRIAIDSLTTVTRKTNIVNAPAVARANTL 841 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW-F 568 R++G+G +N +LA++ Y A + + F + +Y L+ S E+A+E G + F Sbjct: 842 MRSIGLGQMNLHGFLAQNNIAYESEEAKDFANTYFMMVNFYSLQRSMEIARETGETYYKF 901 Query: 569 NETTYAKG----------ILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSA 618 + +TY G P K L + P DW L+E + +GL +S A Sbjct: 902 DGSTYKSGEYFEKYVTNDYSPQYEKVKKLFGDQHIPNIQDWMKLKEDVMKYGLYHSYRQA 961 Query: 619 LMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVP-----DYEHLHDAYEL-LWEM 672 + P+ + S + ++T G+ P + + + +P ++ +AY++ ++++ Sbjct: 962 IAPTGSISYVQSSTAGVMPIMERIEERTYGNSKTYYPMPGLSAQNWFFYKEAYDMDMFKV 1021 Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQ 732 + L+ +Q+ +DQ IS + F + + L + L A+ G+KTLYY Sbjct: 1022 ------VDLIATIQQHVDQGISF------TLFLKDTMTTRDLNRIDLYAHHRGIKTLYYA 1069 Query: 733 NTRDGAEDA 741 T+D ++ Sbjct: 1070 RTKDTTQEG 1078 >UniRef50_Q5DN91 Ribonucleotide reductase n=1 Tax=Phage phiJL001 RepID=Q5DN91_9CAUD Length = 602 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 112/535 (20%), Positives = 203/535 (37%), Gaps = 106/535 (19%) Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 GIG + +R G+ I+ ++ +G + F + + + K + G R GA + H Sbjct: 130 GGIGYDFSTLRPNGALIKKLQSRSSGPLSFMQIYDSVCKCVASSGHRRGAQMGVLRVDHP 189 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFAD 371 ++E + K+N + + + + I ++ GE L + Sbjct: 190 DIEEFIRAKHNE----DNLTGFNTSIAITDRFMECVISGEPFPLTFGGET---------- 235 Query: 372 QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQ---ERASTGRIYIQNVDHCNTHSPFDP 428 + + A L+ ++M+ + A G ++I ++ N + Sbjct: 236 ------------------YRSINAENLWEMIMRSTWDWAEPGTLFIDQINRMNNLKYCET 277 Query: 429 AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL--------------GAIN- 473 A +N C E LP C L +FNL GA + Sbjct: 278 IAA----TNPCGEQPLPP------------YGACLLGSFNLVKYVKPFTGRVFVVGADSR 321 Query: 474 ---NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530 + D VRA+D ++D YP+ ++ A +R +G+GV A G Sbjct: 322 WTFDWDLFATDVYAVVRAMDNVVDRAIYPLFEQEKEAKSKRRMGLGVTALANAAEALGMP 381 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNE----TTYAKGILPIDTYKKD 586 Y + E + +AS ELA+E+GA P ++E + Y + +LP Sbjct: 382 YGSIEFLKFEGQVLETLACNSYQASVELAQEKGAFPLYDERYLDSEYVRQVLP------- 434 Query: 587 LDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEP--PRGYVS 643 E L+E I +G+RNS L+++ P+ T S + N ++GIEP GY Sbjct: 435 -------------EELQEDIGRYGIRNSHLTSIAPTGTISLTADNVSSGIEPVFSYGYDR 481 Query: 644 IKASKDGILRQVVPDYE-HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPS 702 DG+ + V DY + + + ++ ++ + Q F+D ++S N P Sbjct: 482 TVHMPDGVRTERVDDYGVRVFGVEGKTSDQVTAEEHVDVLTVAQGFVDSAVSKTCNVAPD 541 Query: 703 RFPSGKVPMQQLLKDLLTAYKFGVK---TLYYQNTRDGAEDAQDDLVPSIQDDGC 754 +P + + A++ G K T R G + DD +I+ + C Sbjct: 542 ------MPWEDFKQIYFRAWEGGAKGCTTFNSGGKRFGVLRSDDDDQSNIEGEAC 590 >UniRef50_B6IYQ9 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodospirillum centenum SW RepID=B6IYQ9_RHOCS Length = 1191 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 86/310 (27%), Positives = 131/310 (42%), Gaps = 61/310 (19%) Query: 462 CTLSAFNLGAIN----------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRR 511 C L + NL A+ + +EL + LAVR +D ++D +P+ A + A +R Sbjct: 669 CLLGSVNLAALVRDPFTPAARLDREELARVVPLAVRMMDNVVDVSRFPLEAQEAEAQAKR 728 Query: 512 TLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNET 571 +G+GV A L G RY + LT + AIQ + S LA E+GA P F+ Sbjct: 729 RIGLGVTGLADALILCGVRYGSEAGVRLTEEWLRAIQVAAYRTSAALAAEKGAFPLFDRE 788 Query: 572 TYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS-N 630 + L+ L D +RE+I G+RN+ ++++ P+ T S + N Sbjct: 789 AF-------------LERPMVRALPPD---VREAIAAQGVRNALVTSIAPTGTISLFAGN 832 Query: 631 ATNGIEPPRGYVSIKA--SKDGILRQVVPDYEHLHD-AYELLWEMPGND----------- 676 ++GIEP Y +A DG R E + D AY L E G D Sbjct: 833 VSSGIEPVFAYEYQRAVLMPDGSRRT-----ETVQDLAYRLYRERMGPDAPLTDAFVDAQ 887 Query: 677 -----GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLL-TAYKFGVK--T 728 +L + Q+ +D +IS N P+ P + KD+ AY+ G K T Sbjct: 888 SLEPAAHLVMQAAAQRHVDSAISKTINC-PADLPF------EAFKDVYRQAYELGCKGCT 940 Query: 729 LYYQNTRDGA 738 Y N G+ Sbjct: 941 TYRPNAVTGS 950 >UniRef50_B5Y7X0 Ribonucleoside-diphosphate reductase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7X0_COPPD Length = 796 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 142/659 (21%), Positives = 248/659 (37%), Gaps = 128/659 (19%) Query: 140 DMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS-----NYPRETRLQYVK 194 ++ +S A++ LE +YL+++ G I E+ + L VA L E + Sbjct: 2 ELEWSETALRVLEQRYLLRDE-NGNIVETPEQLMHRVAHGLAQIETVWGATSEQISSVEQ 60 Query: 195 RFYDAV--STFKISLPTPIMSGV-RTPT----RQFSSCVLIECGDSLDSINATSSAIVKY 247 F+D + F + PT +G+ + P R S+C+++ DS+D I T K Sbjct: 61 DFFDILWKRDFLPNTPTLFHAGLPKDPKYRGRRFMSACIVLPIEDSIDGIFKTLWDAAKI 120 Query: 248 VSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYP 307 + G+G R+R GS ++ +G + F + V +QGG R GA Sbjct: 121 MQAGGGVGYAFSRLRPKGSLVKSSGGKSSGPVSFMHIYDVMVDVVAQGGKRRGAQMGVLN 180 Query: 308 MWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP--SDVPGLY 365 + H ++ + K + + + V + + + L +P +V G Sbjct: 181 VHHPDILEFIDAKKENTSGQGPLHNFNISVAVTEEFVQAYKEDTTFKLVAPHTGEVVG-- 238 Query: 366 DAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP 425 + A E+ + + TG I +D N Sbjct: 239 --------------------------ELNAREVMHKIAENAWRTGDPGIIFIDRINQLDY 272 Query: 426 FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALC-TLSAFNLGAINNLDELEELAIL 484 D + +N C E LP P N G I L L + G + ++ + L Sbjct: 273 LDDG--RIEATNPCGEQPLP--PYGSCN--LGSINLKHMLKKTDSGYQWDWEKFQRTIRL 326 Query: 485 AVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTF 544 AVR LD +++ DYPIP + A R +G+GV+ +A L+ G Y A K Sbjct: 327 AVRFLDNVIEANDYPIPELEDYAKKARRIGLGVMGWADALSLLGIPYDSEEALEEARKVG 386 Query: 545 EAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRE 604 ++ AS ELA+E+G +++++ + + +P Sbjct: 387 AFLKEKSHLASQELAQERGVFEFYDQSKWKELGIP------------------------- 421 Query: 605 SIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVP---DYEH 661 +RN+ ++ + P+ T S ++N +GIEP + G +V P D Sbjct: 422 ------MRNAAVTTIAPTGTLSILANVNSGIEPYFALAFERKITAGTFHEVQPTLLDVLK 475 Query: 662 LHDAY--ELLWEMPGNDG--------------------------YLQLVGIMQKFIDQSI 693 + Y EL+ + N+G ++++ Q+ ID SI Sbjct: 476 ERELYSEELVQRIIENEGKLRDLEDLPEDIRNAFPTAMEVAPEWHVRMQAAWQENIDSSI 535 Query: 694 SANTNYDPSRFPSGKVPMQQLLKDL----LTAYKFGVKTLYYQNTRDGAEDAQDDLVPS 748 S N +P Q ++D+ L AY+ G K++ RD + + Q VPS Sbjct: 536 SKTVN----------LPYQSTVEDIENIYLLAYELGTKSITVY--RDKSLELQVLNVPS 582 >UniRef50_A9J500 Putative uncharacterized protein gp07 n=2 Tax=unclassified Siphoviridae RepID=A9J500_9CAUD Length = 580 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 116/476 (24%), Positives = 194/476 (40%), Gaps = 65/476 (13%) Query: 191 QYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDS-INATSSAIVKYVS 249 Q+ F DA+ + LP + TRQ + G DS ++ S +V+ Sbjct: 13 QHFADFRDALLGMRF-LPAGRIQSAMGSTRQVTPYNCYVSGTINDSFVDGEGSIMVRAAE 71 Query: 250 QRA------GIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAAT 303 A GIG + +R G IR ++ +G I F F K + G R GA Sbjct: 72 AAATMRMGGGIGYDFSTLRPRGDLIRKLQSHSSGPISFMHIFDAICKCVASSGHRRGAQM 131 Query: 304 LFYPMWHLEVESLLVLKN-NRGVE--GNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 + H ++E + K + V+ + V + G Q +L+ + L + +T F+ S Sbjct: 132 GVMRVDHPDIEEFIHAKQPGKDVQPLWDLVAELPEGAQKQQLIMS-LQQTLKLTGFNVS- 189 Query: 361 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQR-VKAVELFSLMMQ---ERASTGRIYIQN 416 + D F E +E R R V A L+ +M+ + A G ++I Sbjct: 190 -VAITDKFMECVASGEPFPLTFEG----RTYREVDARALWDAIMRGTWDWAEPGVLFIDA 244 Query: 417 VDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL------- 469 ++ N + A +N C E LP C L +FNL Sbjct: 245 INRMNNLWYCETIAA----TNPCGEQPLPP------------YGACLLGSFNLVKYIYKD 288 Query: 470 GA---INNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAK 526 GA + D+ E VRA+D ++D YP+P K+ A +R +G+G+ A Sbjct: 289 GAGCFAFDWDQYREDIPQVVRAMDNVVDRAIYPLPQQKQEAKDKRRMGLGITGLANAAEA 348 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKD 586 G Y + + + ++ AS +AK +G+ P F++ Y +G I T ++D Sbjct: 349 LGHEYGSPAFLAFEAEVLDTLRDESYLASAHIAKVKGSFPKFDKDKYLQGQF-IKTLRED 407 Query: 587 LDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEPPRGY 641 +R++I +G+RNS L+++ P+ T S + N ++GIEP Y Sbjct: 408 ---------------VRDAIAKYGIRNSHLTSIAPTGTISLCADNVSSGIEPVFAY 448 >UniRef50_O41962 Ribonucleoside-diphosphate reductase n=3 Tax=Murid herpesvirus 4 RepID=O41962_MHV68 Length = 783 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 126/559 (22%), Positives = 217/559 (38%), Gaps = 85/559 (15%) Query: 145 YAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA----------CLFSNYPR-------- 186 Y A + Y+++N V YES +++ ++A CLF Sbjct: 100 YLAAARFYDTYVLRNDVK---YESVPHMFMRISAFCAYHCIQNECLFKTLKHMELDRGNV 156 Query: 187 -ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDS----INATS 241 E + + F++ +++ ++ TP+M SSC + +LDS ++A Sbjct: 157 VENAMDLITYFFEMIASQQVCCATPVMRSAGLRDANLSSCFIF--APALDSEEKTVDAVF 214 Query: 242 SAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGA 301 S + K ++ ++G+G++ S G+ H K + + +R + Sbjct: 215 SELTKLLACKSGVGMDL-------STYSHGKNLHA----VLKALDGQITYFNDHNIRPVS 263 Query: 302 ATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE---DITLFSP 358 + +WH + L K E R ++ GV I ++ + R K + + LF P Sbjct: 264 VAAYMEIWHTNIMDFLTAKLPENPE--RCGNLFQGVCIPEIFF-RTYKNDPESNWYLFDP 320 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 L + + F Y + + +F+L+ TG YI N Sbjct: 321 KKAEVLTNTY---GYMFSIAYAGLVEQGAYEAVVPIKSVMFALV-SCIIKTGGPYILNKK 376 Query: 419 HCNTHSPFDPAIAPVRQ---SNLCLE-IALPTKPLNDVNDENGEIAL------------- 461 N H + + R +NLC E I P + ++ N N I L Sbjct: 377 AINRHDWHEWSTHQYRAINCANLCAEVIQYPGENVSTCNLAN--ICLPKCLEDDKFVSGK 434 Query: 462 -CTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINF 520 C L+ +I L+ E A+ + +A + P A+RG R++GIGV Sbjct: 435 SCLLTYEREFSIERLERATEAAVFII---NACIHGGTLPTQRARRG-QSDRSMGIGVQGL 490 Query: 521 AYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN--ETTYAKGIL 578 A A G Y D + L K E + + L S K P+ N ++ ++ G+L Sbjct: 491 ADTFAMMGLGYFDAGSEILDQKIAETLYFNALNTSINFVKIGKGEPYANYEQSKHSIGVL 550 Query: 579 PIDTYKKDLDTIANEPLHY---DWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGI 635 + D D + P+ Y +WE L S + HG+ NS A MP+ + QI+ ++ Sbjct: 551 ----HWHDWDMCS--PMVYTRDEWEDLARSCEVHGVYNSQFVAYMPTAGTGQITGYSDSF 604 Query: 636 EPPRGYVSIKAS-KDGILR 653 P +S K S K+ ILR Sbjct: 605 YPFYSSMSSKVSNKEEILR 623 >UniRef50_Q6AJC4 Ribonucleoside-diphosphate reductase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJC4_DESPS Length = 785 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 98/458 (21%), Positives = 174/458 (37%), Gaps = 98/458 (21%) Query: 207 LP-TPIMSGVRTPTRQFSSCVLIECGDSLDSINAT--SSAIVKYVSQRAGIGINAGRIRA 263 LP +P + T Q S+C ++ DS+D I + A+V G G + RIRA Sbjct: 133 LPNSPCLMNAGTEIGQLSACFVLPVEDSMDGIFTAIRNGALVHKTG--GGTGYSFSRIRA 190 Query: 264 LGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNR 323 + ++ +G + F F A ++ QGG R GA + H ++ + + K ++ Sbjct: 191 CNASVKSTHGVASGPLSFAAVFDAATETIKQGGKRRGANMGVLRVDHPDIMAFISAKEDQ 250 Query: 324 GVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPS--DVPGLYDAFFADQEEFERLYTK 381 ++ + ++ V I L L ++ L PS +V G Sbjct: 251 ----DKFNNFNFSVAITDLFMAALEADKEYDLIEPSTGEVMG------------------ 288 Query: 382 YEKDDSIRKQRVKAVELFSLMMQ---ERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNL 438 ++ AVE+F+ ++ G ++I + NT P + +N Sbjct: 289 ----------QLNAVEVFAKIVDLAWHNGEPGVLFIDAANRDNTT----PQLGDFEATNP 334 Query: 439 CLE-IALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELE-----ELAILAVRALDAL 492 C E LP + C L + NLG DE++ ++ A LD + Sbjct: 335 CGEQWLLPYES-------------CNLGSINLGNFVKNDEVDYSRLGQIVKTATCFLDNV 381 Query: 493 LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLL 552 +D +PIP + R +G+G++ L + Y L + + I+ Sbjct: 382 IDCNVFPIPEIGEMTLKTRKIGLGIMGLHDLLIQLAIPYGSEEGRLLAAEVMQFIRDRCE 441 Query: 553 KASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLR 612 + S +LA+E+GA P ++ I+ Y R Sbjct: 442 EQSRKLAEEKGAFPAYDAE--------INLYP-------------------------ARR 468 Query: 613 NSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG 650 N+ L+++ P+ T S I++ +G EP V +K DG Sbjct: 469 NAALTSIQPTGTVSMIADCASGCEPYFSIVMMKHVMDG 506 >UniRef50_C6JQA3 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JQA3_FUSVA Length = 754 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 117/537 (21%), Positives = 216/537 (40%), Gaps = 94/537 (17%) Query: 222 FSSC-VLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIP 280 +S+C V+ D+L+SI T+ + + S G G++ ++R GS + TG I Sbjct: 73 YSNCYVIAPPEDNLESIFDTAKKLARTYSYGGGCGVDISKLRPRGSEVNNSAKHTTGSIS 132 Query: 281 FYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQIN 340 F + + Q G RG A + + H +V + +K++ N+++ + V+++ Sbjct: 133 FMELYNLTTDIIGQKGRRG-ALMISIDVNHPDVSEFISIKSDL----NKIQKANISVRVD 187 Query: 341 KLMYTRLLKG-EDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELF 399 +++G + +T F D + + + A +LF Sbjct: 188 ANFMKAVIEGMQFVTEFLVEDT------------------------GEVVTKEIDARKLF 223 Query: 400 SLMMQER---ASTGRIYIQNVDHCNTHSP---FDPAIAPVRQSNLCLEIALPTKPLNDVN 453 + ++ A G ++ + N S F+ A +N C E LP Sbjct: 224 KELARQNWKFAEPGILFWDRISKWNLLSEDEEFEYA-----GTNPCAEEPLPA------- 271 Query: 454 DENGEIALCTL--SAFNLGAINNLDELEELAILAVRALDALLD--YQDYPIPAAKRGAMG 509 G L +L F G N D L ++ +V+AL+ +LD +P+ + Sbjct: 272 --GGSCLLGSLILPTFVEGKEFNFDRLAKVVQKSVKALNDVLDEGLPLHPLEEQRESVRD 329 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 R +G+G++ L K G +Y + K + I LKAS LAK+ GA P + Sbjct: 330 WRQIGLGILGVGDLLIKIGMKYGSPESLEFCDKIAKVIVDNALKASALLAKDFGAYPKYK 389 Query: 570 ETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS 629 K ++ ++T+ E I+ +GLRNS L + P+ + + Sbjct: 390 ADKVLKSEFLLEN--ASIETL-------------ELIEKYGLRNSQLLTIAPTGSIGTML 434 Query: 630 NATNGIEPPRGYVSIKAS-----KDGILRQVVP------------DYEHLHDAYELLWEM 672 + GIEP + ++ + +D + +P D E L + + + Sbjct: 435 ETSTGIEPNFAFSYVRKTESLHGEDVFYKVFIPIAKKYMEENNITDEEDLPEYFVTAQSL 494 Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL 729 D +++ G+ QK ID SIS+ N KV ++++ K L A+K G+K + Sbjct: 495 NPYD-RIKMQGVWQKRIDASISSTINL------VNKVSVEEVEKLYLEAWKNGLKGM 544 >UniRef50_Q5L9C8 Ribonucleoside-diphosphate reductase n=26 Tax=Bacteroidetes RepID=Q5L9C8_BACFN Length = 882 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 127/548 (23%), Positives = 213/548 (38%), Gaps = 124/548 (22%) Query: 147 AVKQLEGKYLVQNRVTGEIYE-SAQFLYILVA---ACLFSNYPRETRLQYVKRFYDAVST 202 A + KY V++ G IYE S + ++ +A A + + YP + + +D Sbjct: 60 AARVWVNKYAVKDSF-GNIYEKSPKDMHWRLANEVARIEAKYPNALSSEQLFELFDH--- 115 Query: 203 FKISLP--TPIMSGVRTPTR--QFSSCVLIECGDSLDSINAT---SSAIVKYVSQRAGIG 255 FK +P +P M+G+ + S+C +I S DS A V+ + +R G+G Sbjct: 116 FKYIVPQGSP-MTGIGNDYQVASLSNCFVIGIDGSADSYGAIIKIDEEQVQLMKRRGGVG 174 Query: 256 INAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVES 315 + IR GSP++ TG +PF + + + + +Q G RG Sbjct: 175 HDLSHIRPKGSPVKNSALTSTGLVPFMERYSNSTREVAQDGRRGA--------------- 219 Query: 316 LLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEF 375 L+L + ++H D I+ M + G ++++ L DAF + E Sbjct: 220 -LMLSVS-------IKHPDSEAFIDAKMTEGKVTGANVSV-------KLDDAFMSAAVE- 263 Query: 376 ERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAI----A 431 R YT+ DS VK +E +L + + H N +P + Sbjct: 264 GRKYTQQYPIDSDHPTTVKEIEASNLW------------KKIVH-NAWKSAEPGVLFWDT 310 Query: 432 PVRQS--NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN---------------N 474 +R+S + ++ T N GEI LC + L AIN + Sbjct: 311 IIRESVPDCYADLGYKTVSTNPC----GEIPLCPYDSCRLLAINLYSYVVNPFTKDAYFD 366 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAA-------------------------KRGAMG 509 D + LA R +D ++D + I K+ G Sbjct: 367 FDLFHKHVALAQRIMDDIIDLELEKIERIIEKIDQDPENEEVKHTERGLWEKIYKKSGQG 426 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 RRT G+G+ LA G RY A + K +A+ ++S ++AKE+GA + Sbjct: 427 RRT-GVGITAEGDMLAALGMRYGTEEATEFSEKVHKAVALGAYRSSVDMAKERGAFDVY- 484 Query: 570 ETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS 629 D+ ++ + N D AL E +K +G RN + P+ T+S ++ Sbjct: 485 -----------DSEREKNNPFINRLREAD-PALYEDMKKYGRRNIACLTIAPTGTTSLMT 532 Query: 630 NATNGIEP 637 T+GIEP Sbjct: 533 QTTSGIEP 540 >UniRef50_A0MN59 Ribonucleotide reductase alpha subunit n=1 Tax=Thermus phage phiYS40 RepID=A0MN59_9CAUD Length = 797 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 164/728 (22%), Positives = 274/728 (37%), Gaps = 136/728 (18%) Query: 104 DHVVKMVEMGKYDNHLLEDYTEEEFKQMDTF--IDHDRDMTFSYAAVKQ--LEGKYLVQN 159 D K +E G+ +N L ++ F +++ I+ +D S+ VK+ L + VQN Sbjct: 33 DTFEKFLEYGEPENALTKEEINNVFTELEKLGLIEEIKDELSSFYKVKKEDLIDGFFVQN 92 Query: 160 RVTGEIYESA-------------------QFLYILVAACL----FSNYPRETRLQYVKRF 196 ++ EIY+ F+ + +A L +S + L K F Sbjct: 93 -ISSEIYKQKYQLKDGKNKNELVDLTPYHTFVRVALAVALVNARYSKRLEKYGLDAFKTF 151 Query: 197 YDAVSTFKISLPTPIMSGV------------RTPTRQFSSCVLIECGDSLDSINATSSAI 244 D +F L T +G +T T + V+ + DS+ I T + Sbjct: 152 VDDFLSFFYILATGRSTGAGRVMSNAGSKLYKTYTTLINCTVMRQIPDSMHGIMETLTEA 211 Query: 245 VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL 304 + AG G + IR G+ + G A +G + F + F + G R GA L Sbjct: 212 SLTLKAGAGTGYDFSSIRPKGAFVHGAGAETSGVVSFAEIFDKMCSTIMSAGGRRGAQML 271 Query: 305 FYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDI--------TLF 356 + H E L + K N GV +R+ + + + ++ E+ F Sbjct: 272 VIDVRHPESIDLFMAKRNDGV----LRYFNISLLFPNSLMEKVKNDEEFEQWFWTFEMTF 327 Query: 357 SPSDV---PGLYDAFFADQE-----------EFERL-YTKYEKDDSIRK----------- 390 +PS+V G F D+E E+E Y + +D + K Sbjct: 328 TPSEVIEKNGNNVFFIGDKEVVIVENGKLPYEYEEYDYFAFGEDHQVMKYENFGKDKYRI 387 Query: 391 ------QRVKAVELFSLMMQ---ERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLE 441 +RV+A E++ ++MQ + A G I+I NV++ N +R +N C E Sbjct: 388 YKKEVFKRVRAREIYDIVMQSTYDYAEPGIIFIDNVNNKNVLK----GKEYIRATNPCGE 443 Query: 442 IALPTKPLNDVNDENGEIALCTLSA----FNLGAINN--LDELEELAILAVRALDALLDY 495 LP P N G I L ++L N D+L E++ L R LD + D Sbjct: 444 QPLP--PYGSCN--LGSIFLHRFVKEPFNYDLKPEENFDFDKLFEVSRLMNRFLDFVNDI 499 Query: 496 QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKAS 555 + P+ K A +R G+G+ A L G RY A K IQ + Sbjct: 500 TNLPLVQLKEAAFTKRRHGLGISGIADTLIMVGLRYGSEEAAKFLEKIMYTIQLASAVEN 559 Query: 556 NELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNST 615 +A G P T + + K+ L+ I E D+ L LR S Sbjct: 560 VRMADIYGPAPV--GVTLKEWVDVFGHLKEKLEEIYGE----DFYKLP-------LRYSH 606 Query: 616 LSALMPSETSSQI--SNATNGIEPPRGYVSIK----ASKDGILRQVVPDYEHL------- 662 ++ P+ T S +N NGIEP ++ K ++ V + + Sbjct: 607 AISIAPTGTISLTFGNNVANGIEPTFALSYMRNIRLPGKKTKTQEEVYSFAAILFKNYFG 666 Query: 663 HDAYELLWEMPGN---DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLL 719 H Y + + D ++++ QK++D +IS N P+ + P + + + Sbjct: 667 HTNYNEYFVTTNDITVDEHIRMQASAQKYVDSAISKTCNV-PTDY-----PFEMFKEAYI 720 Query: 720 TAYKFGVK 727 AY+ G+K Sbjct: 721 KAYELGLK 728 >UniRef50_Q3AEA3 Ribonucleoside-diphosphate reductase n=2 Tax=Bacteria RepID=Q3AEA3_CARHZ Length = 1101 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 74/298 (24%), Positives = 123/298 (41%), Gaps = 37/298 (12%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF---SNYPRETRLQYVKRFYDAVSTF 203 A+K LE +YL +N GE+ E+ + ++ VA + NY + + FY+ ++ Sbjct: 8 ALKVLEARYLARNE-KGEVIETPEEMFWRVARAIAQAEKNYAENDEEEIAREFYNFMTAL 66 Query: 204 KISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI-NATSSAIVKYVSQRAGIGINAGRIR 262 TP + P Q S+C ++ GDS++ I +A + + + S G G + R+R Sbjct: 67 DFLPNTPTLVNAGRPLGQLSACFVLPVGDSMEEIFDAVKYSALIHKSG-GGTGFSFSRLR 125 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 A G+ +R +G + F K F A ++ QGGVR GA H ++ + K Sbjct: 126 AKGARVRSTGGIASGPVSFMKVFNAATEAVKQGGVRRGANMGVLRCDHPDILEFITAK-- 183 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 E NR DIT F+ S L D F EE + Y Sbjct: 184 ---EDNR----------------------DITNFNIS--VALTDKFMKALEE-DGEYELI 215 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 E R++A E+F + + G + +D N + P + + +N C+ Sbjct: 216 EPSTGEVVGRLRAREVFERIARNAWKNGEPGVIFIDRINAANVV-PELGEIESTNPCV 272 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 80/328 (24%), Positives = 128/328 (39%), Gaps = 82/328 (25%) Query: 457 GEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDALLDYQDYPIPAAKRG 506 GE L + NLG+IN + + LE+ LAVR LD ++D YP+P ++ Sbjct: 617 GEQPLLPYESCNLGSINLANMVKDGEIDWEHLEKTVKLAVRFLDNVIDVNHYPLPEIEKM 676 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 R +G+GV+ FA L K Y A NL K E I +AS ELA+ +G P Sbjct: 677 TKKTRKIGLGVMGFADMLIKLNIPYDSEEALNLADKVMEFINKKSKEASAELARVRGTFP 736 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 + ++ +AK K LRN+T + + P+ + S Sbjct: 737 AWKKSVWAK-------------------------------KGLKLRNATTTTIAPTGSIS 765 Query: 627 QISNATNGIEP----------------------------PRGYVSIK----ASKDGILRQ 654 I+ ++GIEP GY S K +K G + Sbjct: 766 IIAGVSSGIEPVFALAFKRHILDRKDIVEVHRLFEQHARENGYYSEKLMNEVAKTGRITG 825 Query: 655 VVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL 714 + E + ++ + ++++ + QK D ++S N S ++ + Sbjct: 826 IAGVPEEAKRLFVTALDI-APEWHVKMQAVFQKHTDNAVSKTINMPNS------ATVEDV 878 Query: 715 LKDLLTAYKFGVKTLYYQNTRDGAEDAQ 742 + L AYK G K L RDG+ + Q Sbjct: 879 KESYLLAYKLGCKGLTVY--RDGSREEQ 904 >UniRef50_B6YRR4 Ribonucleoside-diphosphate reductase n=21 Tax=root RepID=B6YRR4_AZOPC Length = 867 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 111/463 (23%), Positives = 173/463 (37%), Gaps = 109/463 (23%) Query: 222 FSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIP 280 S+C +I DS I T ++ + +R G+G + IR GSP+ TG +P Sbjct: 99 LSNCFVIGNRTDSYGGIMRTDEEQIQLMKRRGGVGHDLSHIRPRGSPVNNSAITSTGMVP 158 Query: 281 FYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQIN 340 F + + + + +Q G R GA L + H E+ES + K +E +V + V+ Sbjct: 159 FMERYSNSTREVAQEG-RRGALMLSMSVEHPEIESFIDAK----IEEGKVTGANISVK-- 211 Query: 341 KLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFS 400 L D F E R + + DS Q +K ++ Sbjct: 212 -----------------------LTDEFMRAVES-NRSFIQRFPIDSENPQIIKEIDAKD 247 Query: 401 LMMQ------ERASTGRIYI-----QNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPL 449 L + + A G ++ +++ C S F +N C EI P P Sbjct: 248 LWNKIIHNAWQSAEPGVLFWDTILRESIPDCYIDSGFGTV-----STNPCGEI--PLCPY 300 Query: 450 NDVNDENGEIALCTLSAFNL----------GAINNLDELEELAILAVRALDALLDYQ--- 496 + C L A NL A + D EE LA R +D ++D + Sbjct: 301 DS----------CRLLAINLYSYVKQPFKKEAEFDFDLFEEHVALAQRMMDNIVDLEVEK 350 Query: 497 ----------DYPIPAAK------------RGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 DY K + +GRR +GIG+ LA G RY Sbjct: 351 IDAILMKIISDYESDEIKHTEQLLWEKIRHKTLIGRR-IGIGITAEGDMLAALGFRYGTE 409 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP 594 A N + + + + +AS E+AKE+GA FN P K++D+ Sbjct: 410 EATNFAERIQKVLALSVYRASVEVAKERGAFEIFNIELEKNN--PFIHRLKEVDS----- 462 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637 L E ++ G RN + P+ T+S +S T+GIEP Sbjct: 463 ------QLIEDMQQFGRRNIACLTIAPTGTTSLMSQTTSGIEP 499 >UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=6 Tax=Clostridium difficile RepID=Q18BC3_CLOD6 Length = 729 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 110/527 (20%), Positives = 207/527 (39%), Gaps = 87/527 (16%) Query: 222 FSSCVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIP 280 +S+C +IE DS++ I T+ + + S G+GI+ ++R G+ + TG + Sbjct: 162 YSNCYVIEPPKDSIEDIFDTAKKLARTFSYGGGVGIDISKLRPKGAKVNNAAKHTTGAVS 221 Query: 281 FYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQIN 340 F + + Q G R GA + + H E+E + +K + +V + V++ Sbjct: 222 FMELYSMTTGLIGQRG-RRGALMISMDVNHPEIEDFIDIKTDL----EKVTKANISVRVT 276 Query: 341 KLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFS 400 + + + LY+ F + E++ + V A +LF+ Sbjct: 277 DEFMQAVREKK------------LYNCTFEVETTGEKIV-----------KIVNAYDLFN 313 Query: 401 LMMQER---ASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKP---LNDVND 454 ++ A G ++ + N S D N C E LP+ L +N Sbjct: 314 KFVKNNWDYAEPGILFWDKIKTYNFMSE-DKNFC-FSGVNPCAEEPLPSGGSCLLGSIN- 370 Query: 455 ENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLD--YQDYPIPAAKRGAMGRRT 512 ++ + F A ++++L+ AV AL+ +LD +P+ + R Sbjct: 371 ----LSEFIIQPFGEHATFDINKLKSCVREAVVALNDVLDEGLNLHPLQEQRDSVHKYRQ 426 Query: 513 LGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETT 572 +G+GV+ A L K G RY + L + + +K S +AKE G + Sbjct: 427 IGLGVMGIADMLIKMGIRYGSDESLELCDLIGKTMLNEAVKQSALIAKEYGTFSEYKYEN 486 Query: 573 YAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNAT 632 +K I+ +D +E +K +GLRNS L + P+ + S + + Sbjct: 487 ISKSKFFIENLNEDT---------------KEMVKKYGLRNSQLLTIPPTGSISTMIGIS 531 Query: 633 NGIEPPRGYVSIKAS-----------------KDGILRQVVPDYEHLHDAYELLWEMPGN 675 GIEP I+ + K+ + ++ + D E L D + + G Sbjct: 532 GGIEPIFNLSYIRKTESLHDEDVYYKVYTPIVKEYMDKKGITDEECLPDFFVTAMNI-GY 590 Query: 676 DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAY 722 + + + + QK+ID SIS+ N +P + ++D+ Y Sbjct: 591 EERINMQKVWQKYIDASISSTIN----------IPFETTVEDVFNIY 627 >UniRef50_Q30CC9 Ribonucleoside diphosphate reductase large subunit (Fragment) n=1 Tax=Enterobacteria phage RB2 RepID=Q30CC9_9CAUD Length = 85 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 5/89 (5%) Query: 674 GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQN 733 GN YL V IM K++ QS S+N + DP FP GKVPM ++ DLL + FG K YY N Sbjct: 1 GNKPYLTQVAIMLKWVCQSASSNRHNDPQIFPKGKVPMSIMIDDLLYFWYFGGKNFYYHN 60 Query: 734 TRDGAEDAQDDL-VPSIQDDGCESGACKI 761 TRDG+ DD + + + D C ACK+ Sbjct: 61 TRDGS--GTDDYEIETPKADDC--AACKL 85 >UniRef50_Q2S5T5 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5T5_SALRD Length = 894 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 109/511 (21%), Positives = 193/511 (37%), Gaps = 87/511 (17%) Query: 192 YVKRFYDAVSTFKISL-PTPIMSGVR---TPTRQFSSCVLIEC---------GDSLDSIN 238 + +RFY +S + P P G R LI C DS+D I Sbjct: 90 WTQRFYQLLSGKGLGTGPFPFTPGGRIFANAGTGLGKATLINCFVSGFQGHDQDSMDEIQ 149 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-- 296 A + K ++ G G A +R G+ I G + G + + + G Sbjct: 150 AELTRQAKILASEGGYGFCAHIMRPRGARIGGVGSMTPGAVQMLDVWNKQAATIVAGSGM 209 Query: 297 ----------VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR 346 +R GA + +WH ++ + K G +++K + Sbjct: 210 KSDRDDVKDKIRKGAQMVTMGIWHPDIIEFIEAKQEPG-------------RLHKFNMSV 256 Query: 347 LLKGEDITLFSPSDVPGLYDAFFADQEEFER------LYTKYEKDDSIRKQR-------- 392 L+ E + D L + +++EF + L EK +++ Sbjct: 257 LITDEFMEAVKNDDTWALRFPDYENEKEFYKQHWDGNLKAYQEKGGTVKTWTDPATGEPA 316 Query: 393 -VKAVELFSLMMQE---RASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKP 448 +A E+++ +M R G I++ ++ N + + +N C E LP Sbjct: 317 VYEAREIWNRIMDSTYNRNEPGVIFVDTINKENNLG----YVEHINATNPCGEQVLPVGG 372 Query: 449 LNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAM 508 + + G + + L G I+ D +++L LAVR LD + D P+ +R Sbjct: 373 VCLL----GNLNVTQLVDREAGTID-YDLVDDLVPLAVRFLDNVNDLSYVPLEEQQRNLQ 427 Query: 509 GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWF 568 +R +G+G L RY + + E + +AS LA+E+GA P F Sbjct: 428 EKRRIGLGHYGDGSALMMMKTRYGSEEGARVMREFQEHLANQAYQASARLAEEKGAFPLF 487 Query: 569 NETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 ++ Y +++ + + +E I GLRNS L ++ P+ +S + Sbjct: 488 DKDEY----------------LSSPFVQRLSDKTKEMIGDLGLRNSHLLSIQPTGNTSTL 531 Query: 629 SNA-TNGIEPPRGYVSIKASK-----DGILR 653 NA ++GIEP + I+ S+ DGI R Sbjct: 532 GNAPSSGIEPVFMHSYIRTSEQPALPDGINR 562 >UniRef50_B0C346 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C346_ACAM1 Length = 649 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 117/548 (21%), Positives = 209/548 (38%), Gaps = 94/548 (17%) Query: 140 DMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDA 199 +++ S AV Q KYL+++ V+ E Y+ A + P E + + ++F Sbjct: 10 ELSESQKAVLQ---KYLIEDEVSWEDVVHRVATYVASA----ESTP-EQQSYWQEKFLSI 61 Query: 200 VSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAG 259 + K I++ TR +C ++ D + I S V R G+GIN G Sbjct: 62 LQPMKFVPGGSILANCDHGTRGLLNCFVLSAEDHIHDITKLVSDSVLTTKFRGGVGINIG 121 Query: 260 R------IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMW-HLE 312 IR G+P + G+A G K + G A LF W H + Sbjct: 122 AEGSKGYIRQKGAPFQDGKAL--GPCAVLDMVSENSKKITTGNKARRGAFLFSMNWKHPD 179 Query: 313 VESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQ 372 + + K ++ N + + E++ + D P Q Sbjct: 180 IWEFIQAKTQSTIDANFAKSV----------------MEELAQLAQQDEPSQ-----GKQ 218 Query: 373 EEFERLYTK--------YEKDDSIRKQRVKAV--------ELFSLMMQERASTGRIYIQN 416 E+ + L+T+ + + R +R E F+ + Q +++ Sbjct: 219 EKLKALHTEVGTAWVETHLNPEGKRDRRWHNANISVQLDDEFFAKLDQGDEEANKLWQAM 278 Query: 417 VDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLND---VNDENGEIALCTLSAFNLGAIN 473 + N H+ DP + L ++ A P+ D + GEI L SA NLG++ Sbjct: 279 AE--NAHATADPGL-------LLIDNAKRRSPIRDFVTCTNPCGEIFLPPNSACNLGSLV 329 Query: 474 ---------------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGR-RTLGIGV 517 + D+L E +A+R LD +LD ++ P K R LG+G+ Sbjct: 330 LTKFVRRTAEGNIEIDWDDLAETVRIAIRFLDNVLDVSEFATPDQKHNVRDVFRQLGLGI 389 Query: 518 INFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGI 577 + +A YL Y + I + + S +A E+GAC +++ K I Sbjct: 390 MGWADYLKLARIPYDSARHLEEIDRWGSWIAAHAYRTSEAIAAEKGACGVWDQI---KDI 446 Query: 578 LPIDTYKKDLDTIAN-----EPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNAT 632 + +++ +D+ N E H D R+ + RNST+ ++ P+ + +Q++ + Sbjct: 447 QTGNPFERWMDSEGNYYNGTEAHHND----RQDLTQVPRRNSTVLSIAPTGSIAQLAACS 502 Query: 633 NGIEPPRG 640 EP G Sbjct: 503 WAFEPDFG 510 >UniRef50_B8G0R6 Ribonucleoside-diphosphate reductase n=5 Tax=Bacteria RepID=B8G0R6_DESHD Length = 1153 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 47/225 (20%) Query: 457 GEIALCTLSAFNLGAIN--------------NLDELEELAILAVRALDALLDYQDYPIPA 502 GE L A NLG+IN + + L ++ LA R LD +++ YP+P+ Sbjct: 651 GEQPLLPNEACNLGSINLKLMVTEKNGKVVVDWERLGQITRLATRFLDNVIEANTYPLPS 710 Query: 503 AKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQ 562 + G R +G+GV+ FA L Y+ A K IQ S LA+E+ Sbjct: 711 IEEMVKGNRKIGLGVMGFADMLILLQTSYASEDAVEYAEKVMNFIQTEARLESQRLAEER 770 Query: 563 GACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPS 622 G P + + Y G+ P LRN+TL+ + P+ Sbjct: 771 GTFPNYQGSIY-DGVRP-------------------------------LRNATLTTIAPT 798 Query: 623 ETSSQISNATNGIEPPRGYVSIKASKDGI-LRQVVPDYEHLHDAY 666 T S I A++G+EP K DG L +V P ++ L + Y Sbjct: 799 GTISMICGASSGVEPLFAVAYTKTVMDGTPLIEVNPIFQSLAEDY 843 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/297 (22%), Positives = 121/297 (40%), Gaps = 42/297 (14%) Query: 151 LEGKYLVQNRVTGEIYESAQFLYILVAACL------FSNYPRETRLQYVKRFYDAVSTFK 204 LE +YL Q GE+ ES + + VA+ + F +E + + K FY+ ++ + Sbjct: 24 LEKRYLKQE--NGEVAESPEDMLYRVASIIAQVEETFGKTKKEVK-ELAKSFYEMMAKLE 80 Query: 205 ISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI-NATSSAIVKYVSQRAGIGINAGRIRA 263 +P + Q S+C ++ DS++ I +A SA + + S G G + R+R Sbjct: 81 FMPNSPTLMNAGRDLGQLSACFVLPVEDSMEEIFDAIKSAAIIHKSG-GGTGFSFSRLRP 139 Query: 264 LGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNR 323 S +R +G + F K F A ++ QGG R GA + H ++ + K + Sbjct: 140 KNSTVRSTGGVASGPVSFMKVFNAATEAVKQGGTRRGANMGILRVDHPDIREFITCKEDN 199 Query: 324 GVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE 383 ++IT F+ S G+ + F +E +R Y + Sbjct: 200 ---------------------------KEITNFNIS--VGITEEFMKAVQE-KRHYNLID 229 Query: 384 KDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 ++ A E+F L++ G I +D N +P P + + +N C+ Sbjct: 230 PHTKEADGQLYAPEVFQLIVDHAWRNGEPGIIFLDRLNRDNP-TPQLGEIEATNPCV 285 >UniRef50_C4XRN9 Ribonucleoside-diphosphate reductase n=2 Tax=Desulfovibrio RepID=C4XRN9_DESMR Length = 1096 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 38/284 (13%) Query: 163 GEIYESAQFLYILVAACLFSNYPRETRLQY-----VKRFYDAVSTFKISLPTPIMSGVRT 217 G E Q L+ VA + S + + ++FYD + + +P + T Sbjct: 15 GAPEEDVQGLFWRVAGAIASEEAKYAASPWQPEALARKFYDLMVGMRFLPNSPTLMNAGT 74 Query: 218 PTRQFSSCVLIECGDSLDSI-NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHT 276 P Q ++C ++ GDS+D I +A A + + S G G + R+R S + + Sbjct: 75 PLGQLAACFVLPVGDSMDEIFDAVKFAALIHKSG-GGTGFSFSRLRPKKSRVGSTGGVAS 133 Query: 277 GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYG 336 G + F + F TA + QGG R GA + H ++ + K G + + + Sbjct: 134 GPVSFMRIFNTATEQVKQGGTRRGANMGILRIDHPDILEFIACKEREG----ELTNFNIS 189 Query: 337 VQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAV 396 V + + + KGED L P D ++ + A Sbjct: 190 VALTERFMQAVEKGEDYDLIDPR--------------------------DGSKRGSLSAP 223 Query: 397 ELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 E+F+L++++ +G I +D N +P PA+ + +N C+ Sbjct: 224 EVFALLVRKAWESGDPGIVFLDRINRDNP-TPALGAIESTNPCV 266 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 56/132 (42%), Gaps = 13/132 (9%) Query: 457 GEIALCTLSAFNLGAIN-------------NLDELEELAILAVRALDALLDYQDYPIPAA 503 GE L A NLG+IN + L E LAVR LD ++D YP+ Sbjct: 638 GEQPLLPYEACNLGSINLSVFYDPSAPDGIDWAGLAETVHLAVRFLDNVIDASRYPLDQI 697 Query: 504 KRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG 563 R +G+GV+ FA L Y A L K E +Q AS LA E+G Sbjct: 698 TEMVRANRKIGLGVMGFADLLYLLRIPYDSTEALTLAEKLMETVQAEARSASKTLAAERG 757 Query: 564 ACPWFNETTYAK 575 A P + E+ Y K Sbjct: 758 AFPAYPESIYGK 769 >UniRef50_B9LSK3 Ribonucleoside-diphosphate reductase n=9 Tax=root RepID=B9LSK3_HALLT Length = 1056 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 112/525 (21%), Positives = 190/525 (36%), Gaps = 93/525 (17%) Query: 186 RETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIV 245 RE RF D + + +P + +Q S+C + D + I+ T+ Sbjct: 138 REHVEATADRFRDGMESLSFMPNSPTLMNAGDELQQLSACFVDSPADDITDIHQTAKEAA 197 Query: 246 KYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLF 305 + G+G ++R G + +G I F + F ++ +QGG R GA Sbjct: 198 EVFQSGGGMGYAFWKLRPYGDAVGSTGGIASGPITFMRTFDQMCETIAQGGARRGAQMGV 257 Query: 306 YPMWHLEVESLLVLKNNRGVEGNRVRHMD-----YGVQINKLMYTRLLKGEDITL----- 355 + H +V + KN + +R D + + L R L ED + Sbjct: 258 MRVSHPDVIQFIHSKNKDVSLAHSLRLNDPDDFTHNSFADALEEARELIDEDGKVPEHLR 317 Query: 356 -----------FSPSDVPGLYDAFFADQE----------------EFERLYTKYEKDDSI 388 S +A + D+E E + +Y + + + Sbjct: 318 NAVEGHLSNFNISVGVTDDFMEALYNDEEFTFTNPRTEEPHIATPETKEIYDMFGLGEHV 377 Query: 389 RKQRVKAV---ELFSLMMQ---ERASTGRIYIQNVDHCNTHSPFDPAIAP---VRQSNLC 439 V ++ EL+ M++ E G IY++ V N FD P + +N C Sbjct: 378 EVGEVLSIPADELWDDMIEGAHENGEPGVIYLERV---NKEHSFDTKEHPDHRILATNPC 434 Query: 440 LEIALPTKPLNDVNDEN-GEIALCTL--------------------------SAFNLGAI 472 E +PL + N G I L TL SAF AI Sbjct: 435 GE-----QPLEEYEACNLGHINLSTLAAQDAPDWRVWSDEHADEYDTEEAAMSAFLEEAI 489 Query: 473 NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYS 532 + +E +E R L+ ++ D+P+ ++ R +G+GV+ A + G +Y Sbjct: 490 D-FEEFDERIDYGTRFLENVVTMSDFPVEKIEQKVRDMRKIGLGVMGLAQLYIQLGIQYG 548 Query: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592 N + + I + + S+ELA E+G + E+ YA D ++ A+ Sbjct: 549 TEPGNEVARQLMTHINHASKQTSHELATERGTFNDWEESKYANPTEYRDWFEHYTGLDAD 608 Query: 593 EPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637 E WE +RN + + P+ T+S I N T G EP Sbjct: 609 E-----WE------DGFPIRNHNTTTIAPTGTTSMIGNTTGGCEP 642 >UniRef50_A4VFR5 Ribonucleoside-diphosphate reductase n=32 Tax=Proteobacteria RepID=A4VFR5_PSEU5 Length = 745 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 136/614 (22%), Positives = 226/614 (36%), Gaps = 76/614 (12%) Query: 154 KYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMS 213 KY + ++ I ++ + VA L P + R + +RF A+ I I + Sbjct: 60 KYRLSSKDGTPIDQTVDDTWQRVARALADVEPAKQREHWYERFLWALRNGAIPAGRIISN 119 Query: 214 G----VRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIR 269 + T + V DS+D I + GIG +R GS + Sbjct: 120 AGAQDYKPATSTINCTVSGSITDSMDDILGKVHEAGLTLKAGCGIGYEFSTLRPRGSFVS 179 Query: 270 GGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNR 329 G A +G + F F + S G R GA + + H +V + K G R Sbjct: 180 GAGAHTSGPLSFMDIFDKMCFTVSSAGGRRGAQMGTFDVGHPDVREFIRAKREDG----R 235 Query: 330 VRHMDYGVQI-NKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE----K 384 +R + + I ++ M T GE +F D + R + ++ + Sbjct: 236 LRQFNLSLLITDEFMQTVEADGEWPLIFPVHAKEAAELDLADDAQVIWREWPVHDGYIVR 295 Query: 385 DDSIRK----QRVKAVELFSLMM---QERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSN 437 DD + RVKA L+ ++M + A G I I V+ N + +R +N Sbjct: 296 DDGLVACKIYGRVKARHLWDMIMVSTYDYAEPGFILIDRVNQLNNNW----WCEAIRATN 351 Query: 438 LCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQD 497 C E LP P + + + F + A + D+ E+ + R LD +++ Sbjct: 352 PCGEQPLP--PYGSCLLGSINLTHFVIDPFGVEARFDWDKYREVVRVFTRMLDNVVEING 409 Query: 498 YPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNE 557 P+ + +R G+G + L RY A T + + + + E Sbjct: 410 LPLEQQRHEIESKRRHGMGFLGLGSTLTLLKLRYGSPEACVFTEEVSREMALVGWEQALE 469 Query: 558 LAKEQGACPWFN-------ETTYAKGILPIDTYKKDLDTIANEPLHYDWEA--------- 601 L+KE+G P + E + + D YK D IA LH + Sbjct: 470 LSKEKGPAPLLSQNFEVTAEMLRKRPEMAKDGYKVG-DQIAGRVLHAKYSRYMQKIAEYA 528 Query: 602 --LRESIKTHGLRNSTLSALMPSETS--SQISNATNGIEPPRGYVS----IKASKDGILR 653 L E++ G R + S++ P+ T S +NA+NGIEP + I+ + + Sbjct: 529 PDLIEALAEQGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYSRNLIRPGRKAKEK 588 Query: 654 QVVPDYEHLHDAYELLWEM---PGND-------------------GYLQLVGIMQKFIDQ 691 V YE L AY L PG+D ++ + QK++D Sbjct: 589 IEVFSYELL--AYRTLINARAKPGSDEPGEKLPDYFITADDVSPTQHVDIQAAAQKWVDS 646 Query: 692 SISANTNYDPSRFP 705 SIS N P+ +P Sbjct: 647 SISKTANV-PTDYP 659 >UniRef50_C8WXT6 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WXT6_ALIAD Length = 1065 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 117/279 (41%), Gaps = 36/279 (12%) Query: 476 DELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGS 535 +ELE +R DA++D YP ++ M R +G+G++ + G RY Sbjct: 596 EELELTTRRGIRFQDAVIDATYYPFEENRQNQMSERRVGLGIMGLHDLMLYCGIRYGSEE 655 Query: 536 ANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPL 595 + L + + S ELAKE G P F+ + + + +A E Sbjct: 656 SVKLIDVLMGLMAEWAYLESVELAKEYGPFPKFDAEKFLQSGF--------MRHMAAERP 707 Query: 596 HYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQ- 654 H + E+I+ HG+RN T + P+ T+ + + G EP + + S+ G+ + Sbjct: 708 H-----VVEAIRKHGVRNVTTMTIAPTGTTGTMVGCSTGCEPYYAWSYFRNSRLGLFEEH 762 Query: 655 --VVPDYEHLHDAYELL-------WEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 +V Y H + E L E+ + ++++ +Q++ID SIS N S Sbjct: 763 AAIVEQYRREHPSEESLPPYFVTAMELTPEE-HVRVQAALQRWIDSSISKTCNAPHSYTV 821 Query: 706 SGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQ 742 V + L AY+ G K T+Y RDG+ Q Sbjct: 822 EDTVKLYDL------AYELGCKGITIY----RDGSRSEQ 850 >UniRef50_Q91TP4 T45 n=1 Tax=Tupaiid herpesvirus 1 RepID=Q91TP4_TUHV1 Length = 1035 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 82/366 (22%), Positives = 152/366 (41%), Gaps = 36/366 (9%) Query: 292 CSQGGVRGGAATLFYPMWHLEVESLLVL--KNNRGVEGNRVRHMDYGVQINKLMYTRLLK 349 C R +++ +WH + ++L L ++ G++G +++ V + L + R Sbjct: 560 CRSRQRRATFVRVYFDLWHTQAAAILELIERSASGLDG-----VEFAVNVPNLFFERERH 614 Query: 350 GED-ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERAS 408 + T+F L + A EF +Y + E++ V L++ +++ Sbjct: 615 AKSHWTMFPYEHCAELNERTGA---EFATVYVQKERNRC--GWSVSLGWLYARLVRA-VL 668 Query: 409 TGRIYIQNVDHCNTHSPF------DPAIAP-VRQSNLCLEIALPTKPLN----DVNDEN- 456 TGR+ + D+ + P P + P V N+C+E +P N D +EN Sbjct: 669 TGRLAVVFPDNVGVYGPLLGTMQNVPTLGPHVDMLNVCVERHVPVVRFNVNVDDCYEENV 728 Query: 457 --GEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRG-AMGR-RT 512 G ++ L + G +L L AV A D LL+ + + + G A R R Sbjct: 729 PDGRVSEMDLYIVSSGLAISLCHFRRLVRAAVVAGDLLLE-EIFEQQGPQLGVAFQRYRP 787 Query: 513 LGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELA-KEQGACPWFNET 571 L +G L + G Y A + + E + Y L+ S +L AC WF T Sbjct: 788 LCVGYSGLHTLLLRVGVEYDSDEAVTVAERLAEHLYYEALRTSVDLCIAGLPACSWFGHT 847 Query: 572 TYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA 631 Y++G+ + + + ++ W+ALRE + G+RN+ L +L P ++++ Sbjct: 848 RYSRGLFAFERHGRRPCSVPER----LWDALREDMSAFGMRNAQLVSLGPGWEQARLAGV 903 Query: 632 TNGIEP 637 + P Sbjct: 904 SASFYP 909 >UniRef50_C9RBG7 Ribonucleoside-diphosphate reductase n=1 Tax=Ammonifex degensii KC4 RepID=C9RBG7_AMMDK Length = 955 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 42/191 (21%) Query: 457 GEIALCTLSAFNLGAINNL----------DELEELAILAVRALDALLDYQDYPIPAAKRG 506 GE L + NLG+IN L ++L E+ LAVR LD +++ ++P+PA Sbjct: 650 GEQPLLPYESCNLGSINLLNMVDGAGFSWEKLREVVHLAVRFLDDVIEVNNFPVPAIAAA 709 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 R +G+GV+ +A L K G Y +A L + I+ AS +LA+E+G P Sbjct: 710 TRRTRKVGLGVMGWADALFKLGIPYDSEAALGLGAEVMRFIREEARAASRQLAEERGTFP 769 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 + ++ Y LP LRN+TL+ + P+ + S Sbjct: 770 AWEDSVYYPH-LP-------------------------------LRNATLTTIAPTGSIS 797 Query: 627 QISNATNGIEP 637 I+ + GIEP Sbjct: 798 AIAGVSPGIEP 808 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/299 (21%), Positives = 117/299 (39%), Gaps = 47/299 (15%) Query: 151 LEGKYLVQNRVTGEIYESAQFLY------ILVAACLFSNYPRETRLQYVKRFYDAVSTFK 204 LEG+YL ++ G + E+ + ++ + A F +E ++ +RF++ +++ Sbjct: 28 LEGRYLKRDE-AGNVVETPEEMFWRVARAVAEAEARFGASAQEVE-EWARRFFELMASLD 85 Query: 205 ISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRAL 264 +P + Q ++C ++ DS++SI T G G + R+R Sbjct: 86 FLPNSPTLINAGRELGQLAACFVLPIEDSIESIFETLKYAALIHKSGGGTGFDFSRLRPK 145 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 G P+R +G + F + F A + QGGVR GA H ++ + K G Sbjct: 146 GDPVRSTGGVASGPVSFMRIFNAATEEIKQGGVRRGANMGILRADHPDIMEFVACKEEEG 205 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK 384 R+ + V + DAF FE L E Sbjct: 206 A----FRNFNISVAVT-------------------------DAF------FETLARSGEW 230 Query: 385 DDSIRKQ---RVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 + R + R+ A ELF ++Q + G + +D N +P PA+ + +N C+ Sbjct: 231 ELVFRGKVYRRLPARELFDWIVQHAHANGEPGLLFLDAINRANP-TPALGRIEATNPCV 288 >UniRef50_UPI000155436D hypothetical protein ORF029 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155436D Length = 563 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 113/534 (21%), Positives = 192/534 (35%), Gaps = 117/534 (21%) Query: 149 KQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRL---------QYVKRFYDA 199 K+L+ + LV +T ++ + Y+ A L Y R + ++ +F+D Sbjct: 13 KELQAQGLVPEWMTTGGWQLFKEKYLWEARGLKDTYERIAKTAAQHTDDPDKWAAKFFDV 72 Query: 200 VSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAG 259 + ++ TP++S + T SC DS+D + G G Sbjct: 73 LWRGWLAASTPVLSNMGTIKGMPVSCSGQYIEDSIDGFYSAYHETAMLTKNGFGTSGYLG 132 Query: 260 RIRALGSPIR-GGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL- 317 IR GS I GG+A +G +P +KHF ++ +QG R GA + P+ H + ++ Sbjct: 133 DIRPRGSIISTGGKA--SGTLPIFKHFVQDMRDVAQGTSRRGAWAGYLPIDHGDFYEIVD 190 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFER 377 LK N ++ G +++ RL G+ Sbjct: 191 YLK-------NFPDDLNIGWNLSQAFIDRLEVGD-------------------------- 217 Query: 378 LYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP--FDPAIAPVRQ 435 V AV+ F M +A TG+ Y D N +P + V+ Sbjct: 218 ---------------VDAVQRFQRAMYVKAITGKGYFFKPDTVNAMNPQVYKDRGLEVKA 262 Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDAL--- 492 SNLC EI L +DE+ C LS+ NL + + + + V LD + Sbjct: 263 SNLCTEITL-------FSDEDHTFT-CVLSSMNLEKYDEWKNTDAVFVSTV-FLDCVAQE 313 Query: 493 ---LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 L + R R LG+G + F YL A+ + + F+ + Sbjct: 314 FIRLAKGQKGFEKSVRFTEASRALGLGALGFHTYLQAKMIPLESFEAHMINLEIFQHLHE 373 Query: 550 YLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH 609 +A+ +AK G W K + Sbjct: 374 EATRATKWMAKAWGEPEW--------------------------------------CKGY 395 Query: 610 GLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPDYEHL 662 G+RN+ L A+ P+ +S+ I + GIEP + + + G + +V P + +L Sbjct: 396 GVRNTHLLAIAPNTSSALICGGVSQGIEPVVANLYNQPTSAGEIYRVNPVFLNL 449 >UniRef50_Q19CR5 Ribonucleotide reductase A subunit n=3 Tax=unclassified T4-like viruses RepID=Q19CR5_9CAUD Length = 570 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 102/467 (21%), Positives = 166/467 (35%), Gaps = 117/467 (25%) Query: 187 ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVK 246 + R + +R++D + + K+++ TP+ T SC GDS+ + + Sbjct: 61 DIRPEAEERYFDLLWSGKLAMATPVFCNTGTDRGMPVSCAGSYVGDSVLDFYEGQTEVAM 120 Query: 247 YVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHF---QTAVKSCSQGGVRGGAAT 303 G G IR GS I G +P + +F +T V + + G G Sbjct: 121 LAKNGFGTASYLGDIRPRGSDISTSHNKADGLVPVFDNFVNTKTKVAAAGRRGEWAGYVD 180 Query: 304 LFY-PMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVP 362 + W L+ VLKN H+ + +F D Sbjct: 181 FSHGDFWELQG---YVLKNPASA------HVGW-------------------VFEKED-- 210 Query: 363 GLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNT 422 Y+ A E+ + + ++ RA TG+ Y+ N Sbjct: 211 --YEKLLARDPEYMARWNE--------------------LLYMRARTGKGYMWKNWIAND 248 Query: 423 HSP--FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE 480 +P + +R S LC EIALP+ ++ C LS+ NL DE+ Sbjct: 249 LAPQAIKNSGIRIRSSQLCTEIALPSDDMHTFT--------CILSSLNLA---RWDEISA 297 Query: 481 LAI-LAVRALDA-----LLDYQDYP---IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRY 531 I AVR LD+ L + P + A R R LG+G + F YL + + Sbjct: 298 EDIKWAVRFLDSVCSEFLEKAKKLPYDTLHKAIRFTEKARALGLGTLGFHTYLQMNDTAF 357 Query: 532 SDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA 591 G+A+ L + + I+ Y AS ELA+E G W T Sbjct: 358 ESGAAHILNNSIYSQIKVYAEAASRELAEEHGEPEWCVGT-------------------- 397 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEP 637 G+RN+TL + P+ +S+ ++ + G+EP Sbjct: 398 ------------------GMRNATLITIAPNMSSALLAGGVSQGVEP 426 >UniRef50_C9L7Y1 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Blautia hansenii DSM 20583 RepID=C9L7Y1_RUMHA Length = 763 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 93/432 (21%), Positives = 171/432 (39%), Gaps = 77/432 (17%) Query: 222 FSSCVLIECG-DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIP 280 S+C ++E D+++SI + + + S G G++ ++ G+ + +G + Sbjct: 73 LSNCYVVEPPEDNIESIFDCAKKLARTYSYGGGCGVDISKLAPKGARVTNTAKETSGSVS 132 Query: 281 FYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQI- 339 F + Q G RG A + H ++E + +K++ ++V + ++I Sbjct: 133 FMDLYSLVTGLIGQNGRRG-ALMISIACDHPDLEEFIEIKSDL----DKVTKANISIRIT 187 Query: 340 NKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELF 399 +K M ++ + F +T+ E ++IRK+ + A +F Sbjct: 188 DKFMLAVKMR-----------------------KPFVLSFTREETGETIRKE-IDAYSVF 223 Query: 400 SLMMQ---ERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDEN 456 + + + A G ++ +++ N S D + +N C E LP Sbjct: 224 HKLCEMNWDYAEPGMLFWDRIENWNLLSA-DKEFS-YAGTNPCAEEPLPAG--------- 272 Query: 457 GEIALCTLSAFNLGAIN------NLDELEELAILAVRALDALLD--YQDYPIPAAKRGAM 508 C L + NL N + ++ +AVRAL+ +LD +P+ + Sbjct: 273 ---GSCLLGSINLSEFVTENKTFNFTDFKKTVDIAVRALNIVLDEGLPLHPLKEQRESVR 329 Query: 509 GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWF 568 R +G+G+ A L K G +Y + +L A+ Y + SN +A E G+ P Sbjct: 330 DWRQIGLGIFGLADLLIKIGIKYGSPESIDLCDMIGHAMAYQAIMTSNSIAIEVGSYP-- 387 Query: 569 NETTYAKGILPIDTYKKDLDTIANEPL---HYDWEALRESIKTHGLRNSTLSALMPSETS 625 YK D + P H D E RE+I GL NS L + P+ + Sbjct: 388 -------------KYKP--DAVKQSPFFTEHID-ELYRENISEIGLCNSQLLTIAPTGSL 431 Query: 626 SQISNATNGIEP 637 S + + GIEP Sbjct: 432 SSMLGVSGGIEP 443 >UniRef50_C6LFM8 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=4 Tax=Bacteria RepID=C6LFM8_9FIRM Length = 757 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 128/553 (23%), Positives = 214/553 (38%), Gaps = 103/553 (18%) Query: 222 FSSC-VLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIP 280 +S+C V+ D ++ I + + + S G GI+ + G+ I +G + Sbjct: 73 YSNCYVITPPKDEIEDIFECAKKLARTYSYGGGCGIDISGLAPRGARIHNAAKETSGAVS 132 Query: 281 FYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQIN 340 F + + Q G RG A + H +VE + LK + +V + V+I+ Sbjct: 133 FMELYSMVTALIGQNGRRG-ALMISIDSSHPDVEEFINLKTDL----EKVTKANISVRIH 187 Query: 341 KLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELF- 399 + + + + L +V G ER+ ++ V+A ELF Sbjct: 188 EDFMKAVKENGEYLLSFTREVTG------------ERI-----------EKTVQAKELFH 224 Query: 400 --SLMMQERASTGRIYIQNVDHCNTHSPFDP-AIAPVRQSNLCLEIALPTKPLNDVNDEN 456 +L + A G ++ + N S + A V N C E LP Sbjct: 225 KIALTNWDYAEPGALFWDRITGWNLLSNTKEFSYAGV---NPCAEEPLPAG--------- 272 Query: 457 GEIALCTLSAFNL----------GAINNLDELEELAILAVRALDALLD--YQDYPIPAAK 504 C L + NL A +++ + +VRAL+ +L+ +P+ + Sbjct: 273 ---GSCLLGSINLSEFVQYPFTEAATFDMEGFRKCVQASVRALNEVLEEGLPLHPLQEQR 329 Query: 505 RGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA 564 R +G+G++ A L K G Y + A + K A+ + S ELAKEQGA Sbjct: 330 ESVAKWRQIGLGIMGLADALLKLGLTYGEQDAVAMCDKIGFAMADAAIATSAELAKEQGA 389 Query: 565 CPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET 624 P N A+ I+ + +AN E RE ++ +GLRNS L + P+ T Sbjct: 390 FPACN----AEEIMETPYF------LANTS-----EKTRELVRKYGLRNSQLLTIAPTGT 434 Query: 625 SSQISNATNGIEP--PRGYVSIKASKDG------ILRQVVPDYEHLHD--------AYEL 668 S + + GIEP Y S G + ++V +Y H Y + Sbjct: 435 LSTMLGISGGIEPVYANSYQRKTESLHGTDVYYKVYTKIVDEYMKQHGITEENALPGYFV 494 Query: 669 LWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK- 727 M + + I Q ID SIS+ N P+ F +++ L A++ G+K Sbjct: 495 TAMMLDYHQRIDMQSIWQTHIDASISSTVNV-PNSF-----TVEETESLYLYAWERGLKG 548 Query: 728 -TLYYQNTRDGAE 739 T+Y RDG + Sbjct: 549 ITIY----RDGCK 557 >UniRef50_O26748 Ribonucleoside-diphosphate reductase n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26748_METTH Length = 703 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 40/191 (20%) Query: 457 GEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDALLDYQDYPIPAAKRG 506 GE L T + NLG++N N ++L +AV LD ++D YP+ + Sbjct: 401 GEQPLLTHESCNLGSVNLSLMVGPSGINWEKLRRTIHVAVHFLDNVIDVNSYPLRPVEEM 460 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 + R +G+GV+ FA L K G Y+ +A + + I +AS ELA+E+G+ P Sbjct: 461 TLRTRKIGLGVMGFADMLIKLGIPYNSVAALEVAGRVMSFISSEARRASMELARERGSFP 520 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 F KG + +D + +RN+TL+ + P+ + S Sbjct: 521 EF------KGSI------------------WDIQGF------ECMRNATLTTIAPTGSLS 550 Query: 627 QISNATNGIEP 637 I+ ++GIEP Sbjct: 551 IIAGTSSGIEP 561 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 5/187 (2%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN---YPRETRLQYVKRFY 197 ++ S A+K LE +YL++ GE+ E+ + ++ VA + S Y + + + FY Sbjct: 2 ISLSTTALKVLEERYLLRGE-GGEVVETPEEMFRRVARAVASADEAYGDDPAVAE-EAFY 59 Query: 198 DAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGIN 257 + + +P + TP Q S+C ++ DS+DSI ++ + G+G + Sbjct: 60 SVMGNLEFLPNSPTLMNAGTPINQLSACFVLPVEDSIDSIFSSLRDMAIIHKSGGGVGFS 119 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 R+R G + +G + F + F AV QGG R GA + H ++ S + Sbjct: 120 FSRLRPRGDIVASTMGVASGPVSFMRIFDVAVDVIKQGGRRRGANMGVLHVSHPDIFSFI 179 Query: 318 VLKNNRG 324 K+ G Sbjct: 180 DAKSREG 186 >UniRef50_B2UNR7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Verrucomicrobiales RepID=B2UNR7_AKKM8 Length = 1180 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 87/388 (22%), Positives = 144/388 (37%), Gaps = 58/388 (14%) Query: 221 QFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIP 280 Q S+C L E GDS++ I + + + +G+GIN +R+ PI G + +G I Sbjct: 204 QCSACFLTEVGDSMEDILDHLTTEGRIFASGSGVGINLSTLRSSKEPISG-KGRSSGPIS 262 Query: 281 FYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNR-GVEGNRVRHMDYGVQ 338 F + + + GG R A + H ++ + KN + + +R + V+ Sbjct: 263 FDRGWDRMAGAIKSGGKTRRAARMVLMFSDHPDIFEFINTKNRQEDIAKVILREHNVHVE 322 Query: 339 INKLMYTRLLKGED---------ITL-------FSPSDVPGLYDAFFADQEEFERL---- 378 + ++ T+L+ G ++L F P LY + Q + Sbjct: 323 LKQIAETKLVAGTPAEKAAARVILSLPLATRNSFDPHMDALLYGETLSHQNANHSVSLKG 382 Query: 379 ------------YTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPF 426 YT++ + + +Q +A EL M Q G + N D N +P Sbjct: 383 DFWQALANNGNTYTRWVTNPAHIEQTFRAQELLEAMAQSIWDNGEPGVHNNDVINLWNPV 442 Query: 427 DPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL----------GAINNLD 476 +I + SN C E LN+ + C LS+FN + + D Sbjct: 443 K-SIGTITTSNPCSEYVF----LNNTS--------CNLSSFNAYRFLIKGEDGKPVFDAD 489 Query: 477 ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 L A LA+ D ++ +PI G RT GIG N L G Y Sbjct: 490 ALTHAARLAMVCADLNVERGGFPIEEIAEGTYKYRTTGIGFANVGGSLMALGVPYDSDEG 549 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGA 564 + + A+ AS E+ E G+ Sbjct: 550 RWIASQLCSALTAACWTASAEMGAELGS 577 >UniRef50_B4RFH2 Ribonucleoside-diphosphate reductase alpha chain n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RFH2_PHEZH Length = 570 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/350 (24%), Positives = 144/350 (41%), Gaps = 54/350 (15%) Query: 393 VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQ----SNLCLEIALPTKP 448 V+A L++ +++ TG + +D N +P R+ +N C E+ LP Sbjct: 224 VRARGLWTRILRCAYETGDPGVLFIDRINAENPLA-----WRERLAATNPCGEVPLPDYG 278 Query: 449 LNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAM 508 D+ N + + F A +L L E A AVR LD ++D +P+ A A Sbjct: 279 ACDLGSLN--LTRFVAAPFTPEARLDLAGLAEAAAAAVRLLDDVIDISAFPLAAQADEAR 336 Query: 509 GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWF 568 R +G+G+ A L G RY + ++ + I+ AS LA+E+GA P Sbjct: 337 ATRRIGLGITGLADALVMLGLRYGEAASLRAAGEAMRTIRDAAYGASAGLAREKGAFPAC 396 Query: 569 NETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 G + + L E LR +I HGLRNS L A+ P+ + S + Sbjct: 397 EAERLLAG-----PFARRLP-----------EPLRAAIARHGLRNSHLLAVAPAGSISLL 440 Query: 629 SNA-TNGIEP-------------PRGYVSIK--ASKDGILRQVVPDYEHLHDAYELLWEM 672 + + G+EP P +++ A+ + R+ + L A+ ++ Sbjct: 441 AGGISPGLEPIFAAVQERTLRTSPGETRAVRWTAASVALWRRATGEAAGLPPAFAAAHDI 500 Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAY 722 P D +L + +Q ++DQ+IS N VP++ +D Y Sbjct: 501 PA-DAHLDMQAALQPYVDQAISKTVN----------VPVETPFEDFARIY 539 >UniRef50_D2RTR9 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Halobacteriaceae RepID=D2RTR9_9EURY Length = 1042 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 115/556 (20%), Positives = 202/556 (36%), Gaps = 114/556 (20%) Query: 165 IYESAQFLYILVAACLFSNYPRETRLQY---VKRFYDAVSTFKISLPTPIMSGVRTPTRQ 221 IY +F Y V L P E R + F + +P + +Q Sbjct: 118 IYNVNKFAYDTVVPEL----PDEIRAHVEDVAEEFQGMMENLDFMPNSPTLMNAGDELQQ 173 Query: 222 FSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF 281 S+C + D +D I+ T+ + G+G ++R G + +G I F Sbjct: 174 LSACFVDSPDDDIDDIHQTAKEAAQVFQSGGGMGYAFWQLRPYGDAVGSTGGIASGPITF 233 Query: 282 YKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN------------------- 322 + + ++ +QGG R GA + H +V + KN Sbjct: 234 MRTYDQMCETIAQGGARRGAQMGVMRVSHPDVIQFIHAKNKDVSLAETLRLNDPDDFTHN 293 Query: 323 ------------------------RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 VEG+ + + + V I L GE+ T +P Sbjct: 294 SFQEALDEARELIDDEGKVPKHLRNAVEGH-LSNFNISVGITDDFMEALQNGEEFTFTNP 352 Query: 359 -SDVPGLYDAFFADQEEFERLYTKYEKDDSIR---KQRVKAVELFSLMMQ---ERASTGR 411 + P + A E + LY + D + + + A EL+ +++ E G Sbjct: 353 RTGEPHIATA------ETKELYDMFGLGDYVEVGEELSIPAEELWDDIVEGAHENGEPGV 406 Query: 412 IYIQNVDHCNTHSPFDPAIAP---VRQSNLCLEIALPTKPLNDVNDEN-GEIALCTLS-- 465 IY++ V N FD P + +N C E +PL + N G I L TL+ Sbjct: 407 IYLERV---NKQHSFDVEKHPDHRILATNPCGE-----QPLEEYEACNLGHINLSTLADL 458 Query: 466 ------------------------AFNLGAINNLDELEELAILAVRALDALLDYQDYPIP 501 AF AI+ +E + + R L+ ++ D+P+ Sbjct: 459 EAPDWRVWYDEHGEEYDSLEDAVDAFLEEAID-FEEFDRRIEMGTRFLENVVTMSDFPVE 517 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 ++ R +G+G++ A + G Y ++N + + I + AS+ELA+E Sbjct: 518 KIEQKVREMRKIGLGIMGLAQLYIQLGMEYGSETSNEVARQLMRHINHGSKWASHELAEE 577 Query: 562 QGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMP 621 +G+ ++ + YA + ++K A+E WE +RN + + P Sbjct: 578 RGSFDEWDNSKYANPTEYREWFEKQTGLDADE-----WE------DGFSIRNHNTTTIAP 626 Query: 622 SETSSQISNATNGIEP 637 + T+S + N T G EP Sbjct: 627 TGTTSMVGNTTGGCEP 642 >UniRef50_C9LXZ2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Veillonellaceae RepID=C9LXZ2_9FIRM Length = 749 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 120/517 (23%), Positives = 190/517 (36%), Gaps = 101/517 (19%) Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS 291 D ++SI + I K S GIG+N +R S + TG + F K F T + Sbjct: 85 DDIESIFTVNQQIAKIFSYGGGIGVNISGLRPKDSRVNNVARSSTGAVSFLKIFNTTGEV 144 Query: 292 CSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 SQ G R GA + H ++ L +K E ++ M+ + Sbjct: 145 ISQNGRR-GAMLVALDSEHPDIYEFLHMKQ----ENEKLASMNLSI-------------- 185 Query: 352 DITLFSPSDVPGLYDAFFA---DQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQER-- 406 LFS DAF D E+E + + IR+ ++A E F Q + Sbjct: 186 ---LFS--------DAFMQAVIDDAEYELTFDVEATGEKIRRT-IRAAEFFDEYCQTQWD 233 Query: 407 -ASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLS 465 G ++ ++ S +D + +N C E N N C L Sbjct: 234 WGDPGALFKDRLNDYTLLSGYDE--YKIEVTNPCGEFG-----GNAYNS-------CNLM 279 Query: 466 AFNL--------GAINNLDELEELAIL--AVRALDALLDY--QDYPIPAAKRGAMGRRTL 513 + NL G ++ E E A + AVRALD +LDY P+ ++ R++ Sbjct: 280 SLNLYSFIEDKFGDAPHIAEEEFRAAIQTAVRALDEVLDYGFDTQPLEENRQCIRDWRSV 339 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTY 573 G+G+ A Y + + + + S LAKE+GA ++ Sbjct: 340 GLGLFGVADAFVAMKLAYGSRESCDFIQGVLRTMFTEAARTSAALAKEKGAFGKYDWEKT 399 Query: 574 AKGILPIDTYKKDLDTIANE-PLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNAT 632 K L + +A E P Y IK +GLRN TL ++ P+ T S + Sbjct: 400 KKSPL--------IQRLAEEAPEVY------AEIKEYGLRNGTLLSIAPTGTISLLMGVF 445 Query: 633 NGIEPPRGYVSIKASK------DGILRQVVPDYEHLHDAYELLWEMPGND---------- 676 +G P +S + + G R L D ++L ++ D Sbjct: 446 SGGCEPLYQISYERTTHKMEEGSGSFRVYAHSVSDLLDYHKLPHDLTNEDIKKRFPWVIE 505 Query: 677 ----GYL---QLVGIMQKFIDQSISANTNYDPSRFPS 706 YL +L MQK++D SIS+ N + P+ Sbjct: 506 SHDVPYLHRVELQAAMQKYVDNSISSTVNLKHAATPA 542 >UniRef50_Q122S1 Ribonucleoside reductase n=3 Tax=Proteobacteria RepID=Q122S1_POLSJ Length = 1189 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 33/242 (13%) Query: 474 NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSD 533 + D + VRALD +LD +P+P + + +R +G+G L RY Sbjct: 713 DFDAFGKSVTTQVRALDNVLDLTFWPLPQQQAESAAKRRIGVGFTGLGNALVMLCLRYDA 772 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANE 593 + + ++ AS LAKE+GA F+ A+G L T+ L Sbjct: 773 PEGREMAARIAVCMRDAAYAASVALAKEKGAFLKFD----AEGYLAPGTFANRLPA---- 824 Query: 594 PLHYDWEALRESIKTHGLRNSTLSALMPSETSSQ--ISNATNGIEPPRGYV--SIKASKD 649 L+++I+ HG+RNS L ++ P+ T S NA+NGIEP ++ K D Sbjct: 825 -------GLQQAIRAHGIRNSHLLSIAPTGTVSLAFADNASNGIEPSFSWMYRRRKRESD 877 Query: 650 G-------------ILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISAN 696 G + R++ D + L + EM ++ ++ +Q F+D +IS Sbjct: 878 GSTTDYAVEDHAWRLYRELGGDVDRLPGYFVSALEMSAAS-HIAMMEAVQPFVDTAISKT 936 Query: 697 TN 698 N Sbjct: 937 VN 938 >UniRef50_Q3KSU5 Ribonucleoside-diphosphate reductase large subunit n=5 Tax=Lymphocryptovirus RepID=RIR1_EBVG Length = 826 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 146/659 (22%), Positives = 243/659 (36%), Gaps = 92/659 (13%) Query: 58 IHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDN 117 I E +KA AD P+ LA RL H R KA A Y +++ YD Sbjct: 16 IDELKVKANAD------PEADVLAGRL--LH-RLKAESVTHTVAEY---LEVFSDKFYDE 63 Query: 118 HLLEDYTEEEFKQMDTFID---HDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYI 174 + + +E ++ F ++R ++ Y + + YL R + ES Q Y+ Sbjct: 64 EFFQMHRDELETRVSAFAQSPAYERIVSSGYLSALRYYDTYLYVGRSGKQ--ESVQHFYM 121 Query: 175 LVAA------CLFSNY--------PR-ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPT 219 +A CL++ P E+ ++ +++ +++ + TP M Sbjct: 122 RLAGFCASTTCLYAGLRAALQRARPEIESDMEVFDYYFEHLTSQTVCCSTPFMRFAGVEN 181 Query: 220 RQFSSCVLI--ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTG 277 +SC+L + D A + +Y+ QRAG+G+ G I Sbjct: 182 STLASCILTTPDLSSEWDVTQALYRHLGRYLFQRAGVGVGVTGAGQDGKHIS-------- 233 Query: 278 CIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGV 337 + + V+ + G R + + WH ++ L K E R + G+ Sbjct: 234 --LLMRMINSHVEYHNYGCKRPVSVAAYMEPWHSQIFKFLETKLPENHE--RCPGIFTGL 289 Query: 338 QINKLMYT--RLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKA 395 + +L + R D LF P D L + EEFER Y + RV Sbjct: 290 FVPELFFKLFRDTPWSDWYLFDPKDAGDLERLY---GEEFEREYYRLVTAGKF-CGRVSI 345 Query: 396 VELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTK-------- 447 L ++ G +I + CN H D + +NLC E+ P++ Sbjct: 346 KSLMFSIVNCAVKAGSPFILLKEACNAHFWRDLQGEAMNAANLCAEVLQPSRKSVATCNL 405 Query: 448 -----PLNDVN----------DENGEIALCTLSAFNL-----GAINNLDELEEL--AILA 485 P VN D G+ L L ++ GAI + L L A Sbjct: 406 ANICLPRCLVNAPLAVRAQRADTQGDELLLALPRLSVTLPGEGAIGDGFSLARLRDATQC 465 Query: 486 VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFE 545 + A Q P ++ A ++G+GV A A G +Y+D + +L + FE Sbjct: 466 ATFVVACSILQGSPTYDSRDMA----SMGLGVQGLADVFADLGWQYTDPPSRSLNKEIFE 521 Query: 546 AIQYYLLKASNELA-KEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRE 604 + + L S+ + + P F ++ YA G + +I E W L E Sbjct: 522 HMYFTALCTSSLIGLHTRKIFPGFKQSKYAGGWFHWHDWAGTDLSIPRE----IWSRLSE 577 Query: 605 SIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS-KDGILRQVVPDYEHL 662 I GL NS ALMP+ +Q++ ++ P S K + K+ LR + H+ Sbjct: 578 RIVRDGLFNSQFIALMPTSGCAQVTGCSDAFYPFYANASTKVTNKEEALRPNRSFWRHV 636 >UniRef50_B2KX75 Ribonucleoside-diphosphate reductase n=2 Tax=Spodoptera frugiperda MNPV RepID=B2KX75_NPVSF Length = 850 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 99/435 (22%), Positives = 181/435 (41%), Gaps = 76/435 (17%) Query: 303 TLFYPMWHLEVESLL-VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDV 361 T+ +WH EV++ + ++NN ++V + + V I + R+ TL P Sbjct: 401 TIHIELWHHEVKNFIETIRNN----SDKVNFLQFTVDIPDIFMNRVKNNGYWTLLDPESC 456 Query: 362 PGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCN 421 L + ++FE+ Y K+EK + I + VKA +L L++ G + + D N Sbjct: 457 TSLSSKY---GDKFEQAYVKFEK-EHINAKIVKAKDLLKLIIDTMRINGNLSVMFKDTFN 512 Query: 422 THSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEEL 481 + + + N+ ++ VN E + +NL L + Sbjct: 513 NNFSIEDEQV---KYNIVFSASVAVDKC--VNLETKQF------DYNL--------LRRI 553 Query: 482 AILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTH 541 VR LDA+++ YP+ + + + +G+ FA L G + A L Sbjct: 554 TKNVVRDLDAMININMYPLDKFEN---KKHNIAVGMQGFAETLLLLGYTFDMVEAKALNK 610 Query: 542 KTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA-NEPLHYDWE 600 E I Y ++ASNELA+ A NE+ K ++ + NE L +DW+ Sbjct: 611 LIAETIYYGAIEASNELAE---ASKELNESGKKKSHRNEKITQQIYNVYTDNETLMWDWQ 667 Query: 601 ALRESIKTHGLRNSTLSA--------LMPSETSS--------QISN------------AT 632 +L E ++ +G+++ T + ++ ++T+S QI A Sbjct: 668 SLHEKVERYGVKHVTFVSNTYKTAFEILGTKTTSGPFNSFLYQIEKINYIEEVLVRALAH 727 Query: 633 NGIEPPRGYVSIKASKDGILRQ--VVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQK--F 688 + P SI A+K+G ++ ++PD H+ ++L E QL +++ + Sbjct: 728 ENLNTPTVINSILATKNGSVQNNDLIPD--HIKKVFKLNTETDCK----QLDYMIENSPY 781 Query: 689 IDQS---ISANTNYD 700 IDQ+ I +TNYD Sbjct: 782 IDQTQELILHDTNYD 796 >UniRef50_A4WLF4 Ribonucleoside-diphosphate reductase n=2 Tax=Thermoproteaceae RepID=A4WLF4_PYRAR Length = 1240 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 29/203 (14%) Query: 462 CTLSAF--NLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVIN 519 C +F LG I+ D L + A + R LD +D I R G+G++ Sbjct: 858 CGGGSFEEKLGCID-WDGLAQAARVGTRFLDDAIDRSKTGIEVIDEMNAATRKNGLGIMG 916 Query: 520 FAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILP 579 FA L K G Y+ A L ++ I L S ELA+E+G +F+++ YA+G +P Sbjct: 917 FAELLIKLGVPYASWEAVELINRIMGWIYVNALDESAELAREKGPFKFFHKSIYARGEIP 976 Query: 580 IDTYK-------------------------KDLDTIANEPLHYDWEALRESIKTHGLRNS 614 + ++ +D+ + L + L E ++ G+RNS Sbjct: 977 VLKFQDHVWSRWERIKRVYPRELQEAGDKLRDITMRTRQWLGPYLDKLSEKVR-GGVRNS 1035 Query: 615 TLSALMPSETSSQISNATNGIEP 637 + ++ P+ +S ++ T+G+EP Sbjct: 1036 VVLSIAPTGRTSILAGTTSGVEP 1058 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 12/143 (8%) Query: 190 LQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATS-------- 241 L+ + +YD ++ KI +P T F+SC +E D L SI Sbjct: 176 LERARLYYDYITKLKIVPASPFWFNAWTKKEMFASCFTLEVEDCLSSITHPGRYCIYDAL 235 Query: 242 --SAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRG 299 S I++ + G+G + +R G +RG +G I F + F T V QGG R Sbjct: 236 AYSGIIQQLG--GGVGYDFSLLRPEGDVVRGSVGVASGPISFMRLFDTNVDVIKQGGKRR 293 Query: 300 GAATLFYPMWHLEVESLLVLKNN 322 GA +WH ++ + K Sbjct: 294 GAQMGTLHVWHPDIRKFIKAKTG 316 >UniRef50_Q5SM68 Ribonucleoside-diphosphate reductase n=6 Tax=Thermus RepID=Q5SM68_THET8 Length = 2202 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/265 (22%), Positives = 107/265 (40%), Gaps = 46/265 (17%) Query: 390 KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPL 449 + R + E+ + +E+ S ++++ + PF +A V + L T+P+ Sbjct: 1223 ENRDRFAEVVGFLQEEKQSKLLAFLRHRPRGSYRKPFLATVASVEPAGEAPVYDL-TEPV 1281 Query: 450 ND-------VNDENGEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDAL 492 V GEI L +LGA+N ++E A+R LD + Sbjct: 1282 THSLIANGLVAHNCGEIPLTVGEPCDLGAMNLAAYVKDGEFQMEEFRRDVRTAIRFLDNV 1341 Query: 493 LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLL 552 LD + +P + A R LG+G++ A L K G Y A ++ A++ + Sbjct: 1342 LDVNKFALPDNEMAAKKLRRLGLGLMGLADALIKMGLPYDSEEARRKVYEIVSAMREEAI 1401 Query: 553 KASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLR 612 +AS LA+E+G P + E +++ ++ +P R Sbjct: 1402 RASEALAEERGPFPLYEE------------HREYFQSLGIKP----------------RR 1433 Query: 613 NSTLSALMPSETSSQISNATNGIEP 637 N L + P+ T+S + ++GIEP Sbjct: 1434 NVALLTVAPTGTTSMLMGVSSGIEP 1458 >UniRef50_B7TPW4 GP45 n=1 Tax=Caviid herpesvirus 2 RepID=B7TPW4_9BETA Length = 929 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 6/128 (4%) Query: 512 TLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE-QGACPWFNE 570 L + V F L K Y A L K E + Y LK S L + AC WF Sbjct: 666 ALAVNVTGFHKALMKLDVEYDSNEAVELCRKIHEHVYYEALKTSMSLCRAGASACTWFGR 725 Query: 571 TTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALM-PSETSSQIS 629 T YA+GI+ D Y T + P + W LR++I HGLRN+ +++ P + ++ Sbjct: 726 TMYARGIMMFDRYSV---TPTSVPTKH-WIVLRQNIMRHGLRNAFITSCQDPEDGVCLMT 781 Query: 630 NATNGIEP 637 + I P Sbjct: 782 EGSVSILP 789 >UniRef50_P16782 Ribonucleoside-diphosphate reductase large subunit-like protein UL45 n=18 Tax=Cytomegalovirus RepID=RIR1_HCMVA Length = 906 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/291 (24%), Positives = 115/291 (39%), Gaps = 42/291 (14%) Query: 467 FNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAK 526 F+L + L + E + LDAL+ ++ + +A R L IGV L + Sbjct: 629 FDLSVLREL--VTEAVVWGNARLDALMSASEWWVESALEKL---RPLHIGVAGLHTALMR 683 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQ-GACPWFNETTYAKGILPIDTYKK 585 G Y ++ +L + FE + + ++AS +L K C WF T Y +G + Y+ Sbjct: 684 LGFTYF--ASWDLIERIFEHMYFAAVRASVDLCKSGLPRCEWFERTIYQEGKFIFELYRL 741 Query: 586 DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIK 645 +IA+ WEALR + GLRN A+ P + + + T + RG V + Sbjct: 742 PRLSIASA----RWEALRADMLEFGLRNCQFLAVGPDDEVAHLWGVTPSVWASRGTVFEE 797 Query: 646 ASKDGI----------------LRQVVPDYEHLHDAYE-------LLWEMPGNDGYLQLV 682 + + LR V +Y L E L P +++ Sbjct: 798 ETVWSLCPPNRECYFPTVVRRPLRVPVVNYAWLEQHQEEGKATQCLFQAAPAIQNDVEMA 857 Query: 683 GI-MQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQ 732 + + F+DQ ++ YD SG P LL +L Y + K Y+ Sbjct: 858 AVNLSVFVDQCVALVFYYD-----SGMTP-DVLLARMLKWYHWRFKVGVYK 902 >UniRef50_D1JF25 Ribonucleoside-diphosphate reductase n=1 Tax=uncultured archaeon RepID=D1JF25_9ARCH Length = 919 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 71/323 (21%), Positives = 121/323 (37%), Gaps = 81/323 (25%) Query: 457 GEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDALLDYQDYPIPAAKRG 506 GE L + NLG+IN + + L+E +VR LD ++D YP+ ++ Sbjct: 606 GEQPLLPYDSCNLGSINVSKFVENGEIDWERLKEAVWSSVRFLDDVIDENRYPLSKIEKM 665 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 R +G+G++ A L K Y A + K + I + S EL E+G+ P Sbjct: 666 TKANRKIGLGIMGLAELLIKLKIAYDSKDAVLMAEKLMQFITNEARQCSTELGLEKGSFP 725 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 F + ++ YD +RN+T++ + P+ T Sbjct: 726 NFELSVWST---------------------YD-----------AMRNATVTTIAPTGTIG 753 Query: 627 QISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHD-----AYELLWEMPGNDGYLQL 681 I N ++GIEP ++ G+L ++ +E + + EL+ E+ + Sbjct: 754 IIGNCSSGIEPLFAVAFVRNVMGGML-EINKLFEEIAKEKGFYSKELIAEIAKRGSIQDI 812 Query: 682 VGI-------------------------MQKFIDQSISANTNYDPSRFPSGKVPMQQLLK 716 GI Q++ D ++S N PS G V + Sbjct: 813 AGIPEDIKRVFVTALDISPEWHVRMQAAFQRYTDNAVSKTVNL-PSDATRGDVK-----R 866 Query: 717 DLLTAYKFGVK--TLYYQNTRDG 737 L AYK K T+Y ++G Sbjct: 867 VFLLAYKLKCKGVTVYRYGCKEG 889 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 62/319 (19%), Positives = 126/319 (39%), Gaps = 38/319 (11%) Query: 127 EFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF---SN 183 + + + + D+ S A + L+ +YL+++ + + E+ ++ VA + N Sbjct: 14 DIQGLKKLLSDKSDLNLSANAAEVLKRRYLLKDELE-RVIETPSQMFARVAKAIARAEQN 72 Query: 184 YPR-ETRLQYV-KRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATS 241 Y + + ++ + +RFY + + + +P + T Q ++C +I DS++ I Sbjct: 73 YGKSKAEVKKIEQRFYLLMHSLEFLPNSPTLMNAGTDLGQLAACFVIPVEDSIEGIFGAV 132 Query: 242 SAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGA 301 + + G G + R+R G ++ +G + F + F A QGG R GA Sbjct: 133 KDMARIHQSGGGTGFSFSRLRPKGDVVKSTGGVASGPVSFMRVFDVATDVIKQGGKRRGA 192 Query: 302 ATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDV 361 H ++ + R E + + V + + + E+ L +P Sbjct: 193 NMGIICADHPDILEFI-----RAKERGEFANFNTSVAVTDEFMHAVDRNEEYELINPR-- 245 Query: 362 PGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCN 421 TK E +RK +KA E+F+ ++ G I +D N Sbjct: 246 ------------------TKEE----VRK--IKAGEVFNEIVTYAWKIGDPGIIFLDEIN 281 Query: 422 THSPFDPAIAPVRQSNLCL 440 H+P A+ + +N C+ Sbjct: 282 RHNPVS-AVGRIEATNPCV 299 >UniRef50_Q1J1T0 Ribonucleoside-diphosphate reductase n=3 Tax=Deinococci RepID=Q1J1T0_DEIGD Length = 1010 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 97/451 (21%), Positives = 162/451 (35%), Gaps = 106/451 (23%) Query: 246 KYVSQRAGIG----INAGRIRALGSPIRGGEAFHTGCIPFYKH----------------- 284 + V++ A +G I+ ++R G+PI+G +G + F Sbjct: 227 RAVAESAKVGVEPRIDLSQMRPEGAPIKGSGGTSSGPVSFLMEIFDNFLEWANRGGETSG 286 Query: 285 --------FQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKN--NRGVEGNRVRHMD 334 + ++ QGG R GA + H +V L K+ EG+ + + Sbjct: 287 PINTLRYVYAPVLRVVRQGGTRRGAGMATIAIEHPDVLDFLTAKDLDREAAEGD-ISTFN 345 Query: 335 YGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQ---------------EEFERLY 379 + +++ + + L+G+ + +VPG Y + A Q E+ R Sbjct: 346 ISILVSEQFW-QALEGDALWHVDVQEVPGKY--YLAPQSGPYDGHLPTLPERAEDGARGV 402 Query: 380 TKYEKDDSIRKQR------VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIA-- 431 Y R Q V A L+ + + +TG + VD N HS Sbjct: 403 PLYRGAPRGRSQPADARPGVPAKWLWDQIAEHAWATGEPGLIFVDRVNEHSALKNLGKRY 462 Query: 432 PVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILA-----V 486 +R +N C EI L GE C L A NL A + A A V Sbjct: 463 EIRSTNPCGEIPLTV----------GEP--CDLGAINLAAYVQNSRFDFAAFRADVRTCV 510 Query: 487 RALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA 546 R LD +LD + + + + R LG+GV+ A L K G RY + + A Sbjct: 511 RFLDDVLDVNVFALEDNRVASQDLRRLGLGVMGLADALIKLGLRYDSEAGRAAIAEIMTA 570 Query: 547 IQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESI 606 ++ + S L +E+G P Y+++ I + P Sbjct: 571 LREEAVAESERLGQERGVYP---------------VYERNAQKIPHSP------------ 603 Query: 607 KTHGLRNSTLSALMPSETSSQISNATNGIEP 637 RN + + P+ T+S + ++GIEP Sbjct: 604 ----RRNVAVLTVAPTGTTSMLMGVSSGIEP 630 >UniRef50_Q39UD5 Ribonucleotide reductase large subunit n=3 Tax=cellular organisms RepID=Q39UD5_GEOMG Length = 279 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 32/267 (11%) Query: 485 AVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTF 544 AVR LD +D YP+PA + G R +G+GV+ +A L + G Y+ + L Sbjct: 22 AVRFLDDTIDANIYPLPAIELMHKGNRKIGLGVMGWADLLLRLGLPYNHPQSFALARSLM 81 Query: 545 EAIQYYLLKASNELAKEQGACPWFNETTYAKGILP--------IDTYKKDLDTIANEPLH 596 + ++ KAS ELA+E+G P F + Y P L TIA Sbjct: 82 KFVRDTSRKASAELAEERGVFPNFAGSVYDAPDRPRVRNATTTTIAPTGTLATIA----- 136 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVS----IKASKDGIL 652 D + E + + + L + ++I+ + RG S K + G L Sbjct: 137 -DCSSGIEPLFALAYKRNVLGTEL-----TEINGYFLNVAKERGLFSDELMQKVMEQGNL 190 Query: 653 RQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQ 712 R + + ++ E+P D ++++ Q++ D ++S N P+R G V Sbjct: 191 RGITGIPADIRRLFKTALEIPAAD-HIEMQAAFQEYTDNAVSKTVNL-PARATRGDVA-- 246 Query: 713 QLLKDLLTAYKFGVK--TLYYQNTRDG 737 K L AY+ GVK T++ ++ G Sbjct: 247 ---KAFLLAYEKGVKGITVFRYGSKKG 270 >UniRef50_C1XXN0 Ribonucleoside-diphosphate reductase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XXN0_9DEIN Length = 1014 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 93/452 (20%), Positives = 161/452 (35%), Gaps = 85/452 (18%) Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKH-- 284 ++E D + I T+ V + ++ +R G+PI+G +G + F Sbjct: 211 VLEVPDDMGGIIDTARDAVAMAGKGQEPHVDFSLLRPEGTPIKGSGGTSSGPVSFLLEIF 270 Query: 285 -----------------------FQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKN 321 + ++ QGG R GA + H ++ L K+ Sbjct: 271 DNFLEWGNLGAEKSGPVATLRYVYSPVLRVVRQGGTRRGAGMATLSIDHPDLLDFLTAKD 330 Query: 322 --NRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 EG+ + + + + + + L+ + + P++VPG Y + E L Sbjct: 331 LDREAAEGD-ISTFNISILVTEAFWN-TLQADGLWAVEPAEVPGKYYPYLVQGEYTGALP 388 Query: 380 TKYEKD-DSIR-----KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD--PAIA 431 +++ D R + +V A L+ + +TG + VD N S Sbjct: 389 ELPDREVDGARAIPVYEGKVPAKWLWHEIAWHAWATGEPGLIFVDRINELSALKHLGERY 448 Query: 432 PVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAIL------A 485 +R +N C EI L GE C L A NL A D+ + A Sbjct: 449 RIRATNPCGEIPLTV----------GEP--CDLGAINLAAYVREDKTFDYATFRADVRTC 496 Query: 486 VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFE 545 +R LD +LD + + + + R LG+GV+ A L K G YS K Sbjct: 497 IRFLDNVLDVNVFALEDNRIASQSLRRLGLGVMGLADALIKMGLPYSSEEGRQAVAKIMN 556 Query: 546 AIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRES 605 A++ + AS L +E+G P + A P + Sbjct: 557 AMREEAILASERLGEERGVFPIY----------------------AQHPEKFP------- 587 Query: 606 IKTHGLRNSTLSALMPSETSSQISNATNGIEP 637 + RN + + P+ T+S + ++GIEP Sbjct: 588 -EIRPRRNVAVLTVAPTGTTSMLMGVSSGIEP 618 >UniRef50_B2UIU6 Ribonucleoside-diphosphate reductase n=3 Tax=Ralstonia RepID=B2UIU6_RALPJ Length = 605 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 88/377 (23%), Positives = 144/377 (38%), Gaps = 50/377 (13%) Query: 393 VKAVELFSLMMQ---ERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPL 449 V A +L++++ + A G ++I ++ N + I + +N C E LP P Sbjct: 248 VPARQLWNMIAEAAHHSAEPGLLFIDTINAANDLA----EIETIAATNPCGEQPLP--PW 301 Query: 450 NDVNDENGEIALCTLSAFNLGAINNLD--ELEELAILAVRALDALLDYQDYPIPAAKRGA 507 +++ F +G D L + VR LD ++ +P+P A Sbjct: 302 GSCVLGPIDVSRWVQWPFGMGGQPLFDFVGLSRAVRVQVRMLDNAIEITRWPLPEHMHEA 361 Query: 508 MGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW 567 +R +G+GV A L Y +A + ++ AS LA E+G P Sbjct: 362 QAKRRIGVGVTGLADALTMMCLPYDAPAARCFAAQIGRCLRDSAYAASAALACERGPYPL 421 Query: 568 FN-ETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 F+ E + A G K A+ E++ HGLRNS L +L P+ + S Sbjct: 422 FSPERSLAPGHFSAALPK----------------AVCEAVAKHGLRNSHLLSLAPTGSVS 465 Query: 627 QI--SNATNGIEPPRGY-----VSIKASKDGILRQVVPDYEHLHDAYELLWEMPGN---- 675 N ++GIEP + V I+ + R Y Y +PG Sbjct: 466 LAFGDNCSSGIEPAFDWVYQRRVRIQHRAPQLYRTENRAYRLFRALYGQRAALPGYFVTA 525 Query: 676 ---DG--YLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLY 730 DG +L++V +Q F+D SIS S Q+ L A++ +K + Sbjct: 526 RQIDGLDHLRMVATLQPFVDASISKTVLLPCS------ASCAQVAALLFHAWQLRLKGIT 579 Query: 731 YQNTRDGAEDAQDDLVP 747 G +D +L P Sbjct: 580 IFRPDTGPDDVLSELPP 596 >UniRef50_O69981 Vitamin B12-dependent ribonucleotide reductase n=38 Tax=Actinomycetales RepID=NRDJ_STRCO Length = 967 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 114/481 (23%), Positives = 180/481 (37%), Gaps = 58/481 (12%) Query: 205 ISLPTPIMSGVRTPT-RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRA 263 S +P+ V TP +Q S+C ++ DS++SI +G G+N RIR+ Sbjct: 139 FSFNSPVWFNVGTPQPQQVSACFILSVDDSMESILDWYKEEGMIFKGGSGAGLNLSRIRS 198 Query: 264 LGSPIR-GGEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKN 321 + GG A +G + F + + + GG R A + + H ++E + K Sbjct: 199 SKELLSSGGNA--SGPVSFMRGADASAGTIKSGGATRRAAKMVILDVDHPDIEDFIQTKV 256 Query: 322 NRGVEGNRVRHM-DYGVQINKLMYTRLLKGEDITLF---SPSDVPGLYDAFF-ADQEEFE 376 E ++R + D G ++ L G+DIT + ++ + D F A Q+ + Sbjct: 257 K---EEEKIRALRDAGFDMD-------LGGDDITSVQYQNANNSVRVNDTFMKAVQDGGK 306 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 T + I + V A LF M + + IQ D N P + S Sbjct: 307 FGLTSRMTGEVI--EEVDAKALFRKMAEAAWACADPGIQYDDTINAWHTC-PESGRINGS 363 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNL-------GAIN---NLDELEELAILAV 486 N C E L++ + C L++ NL G N + + ++ L + Sbjct: 364 NPCSEYM----HLDNTS--------CNLASLNLMKFLKDDGKGNQSFDAERFSKVVELVI 411 Query: 487 RALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA 546 A+D + + D+P R LGIG N L G Y L Sbjct: 412 TAMDISICFADFPTQKIGENTRAFRQLGIGYANLGALLMATGHAYDSDGGRALAGAITSL 471 Query: 547 IQYYLLKASNELAKEQGACPWFNETTYAKGILPI-----DTYKK-----DLDTIANEPLH 596 + + S ELA G P+ AK L + D K DLDT Sbjct: 472 MTGTSYRRSAELAAIVG--PYDGYARNAKPHLRVMKQHSDENAKAVRMDDLDTPIWAAAT 529 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSS-QISNATNGIEPPRGYVSIKASKDGILRQV 655 W+ + + +G RNS S + P+ T +S T G+EP V K G Q+ Sbjct: 530 EAWQDVLRLGEKNGFRNSQASVIAPTGTIGLAMSCDTTGLEPDLALVKFKKLVGGGSMQI 589 Query: 656 V 656 V Sbjct: 590 V 590 >UniRef50_Q97K72 Ribonucleotide reductase, vitamin B12-dependent n=2 Tax=Clostridiales RepID=Q97K72_CLOAB Length = 987 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 109/477 (22%), Positives = 175/477 (36%), Gaps = 64/477 (13%) Query: 221 QFSSCVLIECGDSLDSINATSSAIV---KYVSQRAGIGINAGRIRALGSPIRGGEAFHTG 277 Q S+C +I D L ++ S V K +G G N IRA G + GG +G Sbjct: 175 QASACFIISIEDKLLGSHSISEQYVTETKLFKGGSGTGTNFSTIRAKGEKLSGG-GISSG 233 Query: 278 CIPFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYG 336 + F K + GG R A L + H E+ + K E ++V+ Sbjct: 234 LMSFLKGLDRNAGAIKSGGTTRRAAKMLCLNVDHPEIMDYITWK---AKEEDKVK----- 285 Query: 337 VQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIR-KQRVKA 395 + K+ Y +GE S + +D+ + K D++I K RV + Sbjct: 286 -ALGKMGYDASFEGEAYETVSGQNANN--SVMLSDEFMKKVCNLKNNPDETIELKGRVDS 342 Query: 396 VELFSLMMQERAST-GRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND 454 S+ E+ S + ++ C SP + E N +N Sbjct: 343 ----SVNKVEKISNLWEAFNKSSWRCADPSPLFSDTLNAWHTCPGGEDGNFNADYNKINS 398 Query: 455 EN--GEIALCTLSAFNLGAIN------------NLDELEELAILAVRALDALLDYQDYPI 500 N GE A ++ NL +IN +L+ + + L L+A + + +P Sbjct: 399 TNPCGEYAFLDDTSCNLASINLYKFYDTENKTFDLEGYKHVIGLVQLLLEASIHWGQFPT 458 Query: 501 PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAK 560 R RT G+G+ N A L G Y ++ + Y S+ +AK Sbjct: 459 EDVARKTHMFRTTGLGISNLAALLMVMGYPYDSEEGRAISSSLIGVLTGYSYYISSLMAK 518 Query: 561 EQGACPWFNET---------TYAKGILPIDT-----------------YKKDLDTIANEP 594 E GA +N A+ IDT K+DL I++E Sbjct: 519 EVGAFEKYNINKEHMLKVLRNSARAAGSIDTPFEKIGYKPLVVNHSILEKEDLRYISSE- 577 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSS-QISNATNGIEPPRGYVSIKASKDG 650 L W + ES + +G RN+ +S + P+ T S + A+ +EP +V K G Sbjct: 578 LKNSWNSALESGEKYGFRNAQVSVMAPTGTISFAMDCASTSVEPFFSHVIYKKLSGG 634 >UniRef50_P52343 Ribonucleoside-diphosphate reductase large subunit-like protein U28 n=5 Tax=Human herpesvirus 6 RepID=RIR1_HHV6U Length = 804 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 128/332 (38%), Gaps = 56/332 (16%) Query: 430 IAPVRQS-NLCLEIALPTKPL--NDVNDENGE----IAL-CTLSAFNLGAINNLDELEEL 481 + PVR N C+ + L ++V+DE E + L C FN EL + Sbjct: 428 VLPVRDGINTCMRMLLNVVHFLGDEVSDELTEEIDFVRLQCKFFMFN--------ELRRV 479 Query: 482 AILAVRALDALLDY----QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSAN 537 V +A++DY +D+ + G R+LGI V G Y+ A Sbjct: 480 VRKMVLVANAVIDYAVENKDFLCEGIEDG----RSLGICVTGLHSVFMTVGLSYAHPDAR 535 Query: 538 NLTHKTFEAIQYYLLKASNELA-KEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 L E I Y ++ S + K C F+ + YA G+L D + T+ E Sbjct: 536 RLYRMICEHIYYTCVRTSVDCCMKGAEPCNLFDRSKYALGMLYFDHFDNVECTLPEEL-- 593 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP-------PRGYVSIKASKD 649 W LR+ + HG+RN +A + I N++ P R + + KD Sbjct: 594 --WTTLRKDVLMHGVRNIHFTAGTAMQKEFDIINSSESFWPMEDNKILRRSNIKVVIGKD 651 Query: 650 GI----------LRQV-VPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTN 698 G+ L+ + +P Y +L LL + YL+ VG +D ++ + Sbjct: 652 GLNDVTSVYSSELKSLYIPVYNNL-----LLNRFNKHQQYLKTVGYRVLNVDTNLFTDKE 706 Query: 699 YDP-SRFPSGKVPMQQLLKDLLTAYKFGVKTL 729 D + F G L DL+ YK G+ L Sbjct: 707 LDDLAVFKDG---FSYHLNDLIEMYKSGLPFL 735 >UniRef50_D2LPU1 Ribonucleotide reductase large subunit n=3 Tax=Euryarchaeota RepID=D2LPU1_9EURY Length = 355 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 44/218 (20%) Query: 457 GEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDALLDYQDYPIPAAKRG 506 GE L + NLG+IN D+L + AV +D ++D +YP+P Sbjct: 11 GEQPLLPYESCNLGSINLSLFVENGKIKWDDLRDTVHTAVHFMDNVIDANNYPLPQVAEM 70 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 R +G+GV+ +A L K G Y A L K + I +AS +LA+++G P Sbjct: 71 TRRSRKIGLGVMGWAEMLIKLGIPYDSEEAVELAEKVMKFINEESHRASMKLAEKRGVFP 130 Query: 567 -WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETS 625 W + KG+ +RN+T + + P+ T Sbjct: 131 AWEGSEWWKKGM--------------------------------KIRNATTTTIAPTGTI 158 Query: 626 SQISNATNGIEPPRGYVSIKASKDGI-LRQVVPDYEHL 662 S I+ ++ IEP I+ DG L +V P +E + Sbjct: 159 SIIAGTSSSIEPLFAIAFIRRVLDGQELLEVNPLFEEI 196 >UniRef50_Q18GD3 Ribonucleoside-diphosphate reductase n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18GD3_HALWD Length = 1909 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 88/395 (22%), Positives = 150/395 (37%), Gaps = 78/395 (19%) Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 G+G ++R G + +G I F + + ++ +QGG R GA + H Sbjct: 612 GGMGYAFWKLRPYGDSVGSTGGIASGPITFMRTYDQMCETIAQGGARRGAQMGVMRISHP 671 Query: 312 EVESLLVLKNNRGVEGNRVRHMD-----YGVQINKLMYTRLLKGED-------------- 352 +V + KN + +R D + + L R L E+ Sbjct: 672 DVIQFIHAKNKDVSLAHSLRLNDPDDFTHTSFADALEEARELIDEEGRVPEHLRNAVEGH 731 Query: 353 ITLFSPSDVPGLYDAF----FADQE----------------EFERLYTKYEKDDSIR--- 389 ++ F+ S G+ D F FAD+E E + LY ++ + + Sbjct: 732 LSNFNIS--VGVTDEFMEALFADEEFTFTNPRTEDPHIATPETKELYELHDLGEHVEVGE 789 Query: 390 KQRVKAVELFSLMM---QERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPT 446 + V A EL+ ++ E G IY++ V+ ++ + + +N C E Sbjct: 790 ELSVPAEELWDHIVSGAHENGEPGVIYLERVNKEHSFDVEKHSEHEILATNPCGE----- 844 Query: 447 KPLNDVNDEN-GEIALCTLSA-----------FNLGAINNLDELEELAIL---------- 484 +PL + N G I L TL+ N A NNLD+ E I Sbjct: 845 QPLEEYEACNLGHINLSTLADKDAPDWRVWYDNNGDAYNNLDDAAEAFIYEAIDMNAFNR 904 Query: 485 ----AVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 R L+ ++ D+P+ + R +G+G++ A + G RY AN + Sbjct: 905 RIESGTRFLENVVTMSDFPVDEIEATVRDMRKIGLGIMGLAQLYIQIGVRYGSQEANAIA 964 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAK 575 + I + AS+ELAKE+G + E+ YA Sbjct: 965 EQLMTHINHESKWASHELAKERGTFNDWTESKYAN 999 >UniRef50_C9M6M1 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6M1_9BACT Length = 881 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 85/390 (21%), Positives = 135/390 (34%), Gaps = 65/390 (16%) Query: 216 RTPTRQFSSCVLIECGDSLDSI-NATSSA--IVKYVSQRAGIGINAGRIRALGSPIRGGE 272 RT +Q +C ++ DS++ I +A A I KY G+G N G +R G+PI+GG Sbjct: 158 RTANQQLFACFVVSVPDSIEGIFDAVKDAAIISKY---GGGVGANFGHLRESGAPIKGGT 214 Query: 273 AFH-TGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVR 331 +G + F + + T QGG R A P H ++E + K G R+ Sbjct: 215 GGKASGPVSFMETWNTMGSVVVQGGRRRAALMGMLPDNHPDIERFMDAKTEDG----RLP 270 Query: 332 HMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQ 391 + + V ++ + +G D L S + D Sbjct: 271 YFNISVCVSDRLVNAAREGGDFPLVS--------------------------RVDGKTAA 304 Query: 392 RVKAVELFSLMMQ---ERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKP 448 V A +L+ + R G +I N DP + +N C E LP Sbjct: 305 TVPAAQLWDKLCSNAWRRGDPGVFFIDRAGADNLLRE-DPEFV-IESTNPCGEQPLPN-- 360 Query: 449 LNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRA----------LDALLDYQDY 498 C L + NL A D +LA R LD ++D Y Sbjct: 361 ----------YTSCNLGSINLSAFVAPDGSGQLAFDEARFVDQVYRSMVYLDLVIDSCSY 410 Query: 499 PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNEL 558 P+ R R +G+G++ + G Y + + + L A+ + Sbjct: 411 PLERIGRRTRQIRPVGLGLMGLSDAAIASGLVYGSPEFSGFCDRLASVMAVCALLATVDS 470 Query: 559 AKEQGACPWFNETTYAKGILPI-DTYKKDL 587 G P+ + K P+ D DL Sbjct: 471 VDHLGKEPFAASSAVVKLFAPLRDELGGDL 500 >UniRef50_D2R4B9 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R4B9_9PLAN Length = 1041 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 108/458 (23%), Positives = 170/458 (37%), Gaps = 49/458 (10%) Query: 221 QFSSCVLIECGDSLDSIN--ATSSAIV-KYVSQRAGIGINAGRIRALGSPIRGGEAFHTG 277 Q S+C + D++++I ATS A++ K+ S G G + +R+ + GG +G Sbjct: 191 QGSACFIQSVDDNMEAIMRLATSEAMLFKFGS---GTGTDLSTLRSHREKLSGG-GKPSG 246 Query: 278 CIPFYKHF-QTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYG 336 + F + + Q A S G R A +WH ++ + K R H Sbjct: 247 PLSFMRVYDQIAAVVKSGGKTRRAAKMQSLKVWHPDILEFVECKWKE----ERKAH---- 298 Query: 337 VQINKLMYTRLLKGEDIT--LFSPSDVP-GLYDAFFADQEEFERLYTKYEKDDSIRKQRV 393 V I K Y GE + LF +++ L D F E+ E+ T + D S Sbjct: 299 VLIEKGGYEANFNGEAYSSILFQNANLSVRLTDEFMQAHEKNEKWATHWITDASKEGPVY 358 Query: 394 KAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN 453 +A L + M + G +Q N P + SN C E L+D Sbjct: 359 EARWLLNRMAECAWQCGDPGVQYDTTINKWHTC-PNSGRINASNPCSEYMF----LDDT- 412 Query: 454 DENGEIALCTLSAFNLGAIN------NLDELEELAILAVRALDALLDYQDYPIPAAKRGA 507 C LS+ NL N+D + L A + L+D+ YP R + Sbjct: 413 -------ACNLSSINLMKFREADGSFNVDRFKTACRLFFIAQEILVDHASYPTEQIARNS 465 Query: 508 MGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW 567 R LG+G N + +G Y +A L + AS E+A G P+ Sbjct: 466 HAFRPLGLGYSNLGSLIMSNGLPYDSEAAYGLCGSVTALLHGAANLASAEMAAVVG--PF 523 Query: 568 FNETTYAKGILPIDTYKKDLDTIAN--------EPLHYDWEALRESIKTHGLRNSTLSAL 619 + L + +D N E W+ + + G RN+ + L Sbjct: 524 EGYEANREPFLRVMQMHRDAVEDINPAGPADLQEAARATWDQVLALGRRTGFRNAQATVL 583 Query: 620 MPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVV 656 P+ T S + + T GIEP V K G + ++V Sbjct: 584 APTGTISFMMDCDTTGIEPDIALVKYKQLAGGGMLKIV 621 >UniRef50_Q9DWE5 PR45 n=1 Tax=Rat cytomegalovirus Maastricht RepID=Q9DWE5_RCMVM Length = 1064 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 4/129 (3%) Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW--F 568 R L + V+ F L + G Y+D ++ L + E + Y ++AS +L GA P+ F Sbjct: 774 RPLQLRVLGFHAVLGRLGLLYTDDASVLLGRRIAEFVHYAAVRASVDLCV-HGAEPFPKF 832 Query: 569 NETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 + + +A G L D + L ++ P + W LRE + +G+RNS E S+ + Sbjct: 833 SRSLFATGRLYPDLFDDPLQETSSLPAGH-WAQLREDVVRYGVRNSAFVCGGLGEESANV 891 Query: 629 SNATNGIEP 637 + T G+ P Sbjct: 892 AGTTPGMFP 900 >UniRef50_B4D0S2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Verrucomicrobia RepID=B4D0S2_9BACT Length = 1043 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 117/558 (20%), Positives = 207/558 (37%), Gaps = 91/558 (16%) Query: 221 QFSSCVLIECGDSLDSIN--ATSSAIV-KYVSQRAGIGINAGRIRALGSPIRGGEAFHTG 277 Q S+C + D+++ I A S A++ KY S G G + +R+ + GG +G Sbjct: 201 QGSACFIQSVDDNMEDIMRLAMSEAMLFKYGS---GTGSDLSTLRSTREKLSGG-GRPSG 256 Query: 278 CIPFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYG 336 + F K + GG R A WH ++E + K + + Y Sbjct: 257 PLSFLKVYDQVANVVKSGGKTRRAAKMNTLKDWHPDIEEFIEAKTKEEKKAWALIEQGYD 316 Query: 337 VQINKLMYTRLL-KGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS-IRKQRVK 394 N Y ++ + E++++ + D F E + +TK D K+ K Sbjct: 317 GSYNGDAYGSIMYQNENLSVR-------VSDEFMNAAVEGKEWWTKRVTDGKPCEKKEAK 369 Query: 395 AVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND 454 A ++++ A TH DP + Q + ++ K N Sbjct: 370 A------LLRKIAE------------GTHLCGDPGV----QFDTTIDKWHTCKGTGRQNS 407 Query: 455 EN--GEIALCTLSAFNLGAIN-----------NLDELEELAILAVRALDALLDYQDYPIP 501 N E +A NL ++N +++ + + + A + ++D YPI Sbjct: 408 TNPCSEYLFLDNTACNLASLNLLKFKKADGGFDVERFKAAVRVFITAQEIIVDNASYPIK 467 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 + RTLG+G N + +G Y L + + + S +LAK Sbjct: 468 EIAENSHIFRTLGLGYANLGALIMSYGLGYDTDEGRALAGAITSIMTGHAYEQSAKLAKT 527 Query: 562 QGACPWFNETTYAKGILP-------------IDTYKKDLDTIAN--------EPLHYDWE 600 G P + +T A G+ ID ++ + I + E W+ Sbjct: 528 MGPFPGYKDTR-ASGVKKTVDSTNESYMLEVIDLHRSHVSRIQDSDRFGYLKEEAQKCWD 586 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVV--- 656 K HG RN+ ++ L P+ T + + T GIEP V K G + ++V Sbjct: 587 GALAQGKKHGYRNAQVTVLAPTGTIGFLMDCDTTGIEPDIALVKYKLLAGGGMLKIVNQT 646 Query: 657 --PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL 714 P ++L ++ E+ G +V + KF +I T+ D + PSG P Sbjct: 647 VKPALQNLGYSFA---EIEG------VVAHIDKF--DTIEDVTDEDGTTIPSGLKPEHLP 695 Query: 715 LKDLLTAYKFGVKTLYYQ 732 + D G ++L+Y+ Sbjct: 696 VFDCAFKPHRGSRSLHYR 713 >UniRef50_D1ABC6 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=3 Tax=Actinomycetales RepID=D1ABC6_THECD Length = 1370 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 86/381 (22%), Positives = 143/381 (37%), Gaps = 53/381 (13%) Query: 203 FKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR 262 F + P G ++P Q S+C ++ D+++SI +G G+N RIR Sbjct: 134 FSFNSPVWFNVGTKSPW-QVSACFILSVDDTMESILDWYKEEGIIFKGGSGAGLNLSRIR 192 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKN 321 + + G +G + F + + + GG R A + + H ++E + K Sbjct: 193 SSKELLSSG-GTASGPVSFMRGADASAGTIKSGGATRRAAKMVVLDVDHPDIEEFIWTKA 251 Query: 322 NRGVEGNRVRHM-DYGVQINKLMYTRLLKGEDITLF---SPSDVPGLYDAFFADQEEFER 377 E +++R + D G ++ L G+DIT + ++ + D F E E Sbjct: 252 R---EEDKIRALRDAGFDMD-------LGGKDITSVQYQNANNSVRVSDEFMRAVENDEE 301 Query: 378 LYTKYEKDDSIRKQRVKAVELFSLMMQ---ERASTGRIYIQNVDHCNTHSPFDPAIAPVR 434 + + + V+A +LF M Q E A G Y ++ +T +P + Sbjct: 302 FGLRARLTGEV-IETVRARDLFRAMAQAAWECADPGIQYDDTINDWHT----NPETGRIT 356 Query: 435 QSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE-----------LAI 483 SN C E ++ +N S+ NL +IN L L E L Sbjct: 357 ASNPCSEY---------MSLDN--------SSCNLASINLLKFLREDDTFDITRFVKLTE 399 Query: 484 LAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKT 543 L + A+D + + D+P R LGIG N L G Y +L Sbjct: 400 LIITAMDISITFADFPTEKIAETTRAYRQLGIGYANLGALLMATGHAYDSEGGRSLAAAI 459 Query: 544 FEAIQYYLLKASNELAKEQGA 564 + + S ELA GA Sbjct: 460 TSLMTATAYRRSAELAGIVGA 480 >UniRef50_C6BQC0 Ribonucleotide reductase alpha subunit-like protein n=1 Tax=Ralstonia pickettii 12D RepID=C6BQC0_RALP1 Length = 442 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 18/137 (13%) Query: 478 LEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSAN 537 LEE LAVR LD++ D ++ + + +GRR +GIG+ A+ L + G + A Sbjct: 238 LEEQIRLAVRELDSMHDVKET-LGCLGQPGLGRR-IGIGISGVAFALQQLGVAGNADKAR 295 Query: 538 NLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHY 597 + ++ +AS +LA+E GA PWF+ + G P+ D + E Sbjct: 296 AALAQVTRIVRDEAYRASCDLAEEVGASPWFDSVEFHTG--PV------ADQLPPE---- 343 Query: 598 DWEALRESIKTHGLRNS 614 L E I+T+GLRN+ Sbjct: 344 ----LVERIRTYGLRNA 356 >UniRef50_B3UXH6 Ribonucleotide reductase n=7 Tax=Murid herpesvirus 1 RepID=B3UXH6_MUHV1 Length = 1180 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 11/155 (7%) Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW--F 568 R L IGV+ F + + G++++D + +L + E I Y ++AS +L GA P+ F Sbjct: 893 RDLHIGVVGFHAVVNRLGQKFADMESYDLNQRIAEFIYYTAVRASVDLCM-AGADPFPKF 951 Query: 569 NETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 ++ YA G D + D + E LRE + HG+RN++ ++ ++ + Sbjct: 952 PKSLYAAGRFYPDLFDDDERGPRRMTKEF-LEKLREDVVKHGIRNASFITGCSADEAANL 1010 Query: 629 SNATNGIEPPRGYVSIK-------ASKDGILRQVV 656 + T G P R V ++ +KD +L + V Sbjct: 1011 AGTTPGFWPRRDNVFLEQTPLMMTPTKDQMLDECV 1045 >UniRef50_Q9RRW1 Ribonucleoside-diphosphate reductase n=1 Tax=Deinococcus radiodurans RepID=Q9RRW1_DEIRA Length = 1418 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 41/191 (21%) Query: 457 GEIAL-----CTLSAFNLGAINNLDELEELAILA-----VRALDALLDYQDYPIPAAKRG 506 GEI L C L A NL A + + A A VR LD +LD + + + Sbjct: 892 GEIPLTVGEPCDLGAINLAAYVRGSDFDFAAFRADVRTCVRFLDDVLDVNVFALEDNRVA 951 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 + R LG+GV+ A L K G RY + S + A++ + S L +E+G P Sbjct: 952 SQDLRRLGLGVMGLADALIKMGLRYDNESGRQAIYDIMSALREEAVAESERLGQERGFYP 1011 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 Y+++ + + ++P RN + + P+ T+S Sbjct: 1012 ---------------VYERNREQVPHDP----------------RRNVAVLTVAPTGTTS 1040 Query: 627 QISNATNGIEP 637 + ++GIEP Sbjct: 1041 MLMGVSSGIEP 1051 >UniRef50_P50641 Ribonucleoside-diphosphate reductase large subunit-like protein U28 n=2 Tax=Human herpesvirus 7 RepID=RIR1_HHV7J Length = 806 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 75/188 (39%), Gaps = 13/188 (6%) Query: 467 FNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAK 526 FNL + + EL ++ +D L+ +D+ + G + R+L I V L Sbjct: 472 FNLKKMR--KTVTELVLIGNAVIDYALENRDFLMD----GIVNARSLAICVTGLHSALMS 525 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA--CPWFNETTYAKGILPIDTYK 584 ++ L E I Y ++ S K +GA C +F + YA+GIL D Y Sbjct: 526 MNLPFNSQLGCQLYRIVCENIYYSSVRTSMNCCK-KGAEPCSFFQRSKYAQGILHCDLYD 584 Query: 585 KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSI 644 T+ N W LR IK +GLRN T + + N + P G + Sbjct: 585 NVEYTLPNVL----WTNLRSDIKKYGLRNLTFVSGSAMSKEFDLLNCSQSFCPIEGNKIL 640 Query: 645 KASKDGIL 652 K S +L Sbjct: 641 KRSSIKVL 648 >UniRef50_Q6MNP6 Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Bdellovibrio bacteriovorus RepID=NRDJ_BDEBA Length = 764 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 124/583 (21%), Positives = 219/583 (37%), Gaps = 96/583 (16%) Query: 221 QFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR----ALGSPIRGGEAFHT 276 Q S+C + DS++SI + K +G G N +IR A GS GG++ + Sbjct: 168 QCSACFIQSVDDSIESIFDLAKTEAKLFKYGSGTGSNFSKIRSKYEATGS---GGKS--S 222 Query: 277 GCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDY 335 G I F + + GG R A + + H EV + K + + + Sbjct: 223 GLISFLEVLDKGAGAIKSGGTTRRAAKMVVVDIDHPEVLDFIDWKMREEQKAHLLIAAGL 282 Query: 336 GVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKA 395 Y R + G++ ++ + DAF E+ ER + + + + A Sbjct: 283 SADFEGEAY-RTVSGQN-----ANNSVRVSDAFMKAVEQ-ERPWKLKARLTGKVLREIPA 335 Query: 396 VELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDE 455 E+++ + + IQ D N P + SN C E L+D Sbjct: 336 GEVWNRITRAAWMCADPGIQFHDTINKWHTC-PETDIIHSSNPCSEYMF----LDD---- 386 Query: 456 NGEIALCTLSAFNL-GAINNLDELE-ELAILAVRAL----DALLDYQDYPIPAAKRGAMG 509 + C L++ NL +N+ + + E I R L + L+DY YP + + Sbjct: 387 ----SACNLASINLVKFLNDTGDFDFESFIHTARTLFVAQEILVDYSSYPTQRVAQNSHD 442 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 R LG+G N L + G Y + S+E+A+ +G P+ Sbjct: 443 YRPLGLGFANLGSLLMRKGVAYDSDEGRAWAGALTSLMSGVAYLTSSEMARAKG--PFAG 500 Query: 570 ETTYAKGILPI-DTYKKDLDTIANE--PLHYD------WEALRESIKTHGLRNSTLSALM 620 +K +L + +++ L+ +A + P D W+ + + + +G RN+ + + Sbjct: 501 YRKNSKSMLKVMKMHERALNQVAWKMLPAGIDKAVRNLWKGVLYNGEKYGYRNAQATVIA 560 Query: 621 PSETSSQISNA-TNGIEPPRGYVSIKA------------SKDGIL---------RQVVPD 658 P+ T + + T GIEP + K S D L RQ + Sbjct: 561 PTGTIGLLMDCDTTGIEPDFSLIKFKKLVGGGEIQIVNQSVDAALASLQYFEDERQAILK 620 Query: 659 Y------------EHLHD--AYELLWEMPGN-----DGYLQLVGIMQKFIDQSISANTNY 699 Y H D ++ MPG + +++++ +Q FI +IS N Sbjct: 621 YVEENNSVVGAPQMHPEDLPVFDTATAMPGQRVLSPESHVKMMAAVQPFISGAISKTVN- 679 Query: 700 DPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQ 742 PS + + + A+K GVK + RDG++ +Q Sbjct: 680 ----MPSTATE-EDISRIYFLAWKLGVKAVAVY--RDGSKQSQ 715 >UniRef50_Q3JIM4 Ribonucleoside reductase, intein-containing n=47 Tax=Burkholderia RepID=Q3JIM4_BURP1 Length = 639 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 25/187 (13%) Query: 467 FNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAK 526 F+ A + +E VR LD LD +P+ A R + +R +G+GV A LA Sbjct: 369 FDFAAFDTAVRIE------VRLLDNALDVTRWPLAAHARESYQKRRIGVGVTGLADMLAM 422 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKD 586 RY +A + ++++ AS ELA E+GA P + + Sbjct: 423 MRLRYDSPAAREMARYIASDLRHHAYAASAELAAERGAYPLCDRHAH------------- 469 Query: 587 LDTI-ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI--SNATNGIEPPRGYVS 643 LD + A PL + A+ +I+ GLR+S L++ P S + + GIEP R ++ Sbjct: 470 LDALRAGPPLPH---AVCHAIERDGLRHSHLTSFAPVIGVSLAFGDHCSPGIEPARAWIE 526 Query: 644 IKASKDG 650 + + G Sbjct: 527 HRPVRAG 533 >UniRef50_O55567 P25 n=1 Tax=Leucania separata nuclear polyhedrosis virus RepID=O55567_NPVLS Length = 222 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 41/188 (21%), Positives = 76/188 (40%), Gaps = 5/188 (2%) Query: 224 SCVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFY 282 SC L+ DS+ I T + GIG+N +R S I+ +G +P Sbjct: 19 SCFLLTMESDSIRGIYNTLNDCAMISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPML 78 Query: 283 KHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKL 342 + F V+ + ++ +L ++ N G E + R + + + + Sbjct: 79 RVFNNMVRHVIKVASEKAPKQCTLNRGIGDIMDVLHMRRNIGSEDTKARDLMNALWVPDI 138 Query: 343 MYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLM 402 R+ + +L P++ P L D + ++FE Y YE R+Q + AV L + Sbjct: 139 FMKRVEENGIWSLMCPNECPKLNDTY---GDDFEYWYKHYEDKGQFREQ-MPAVTLMRNI 194 Query: 403 MQERASTG 410 ++ +A T Sbjct: 195 IEIQAETA 202 >UniRef50_O55716 IIV-6 RIR1 intein n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR1_IIV6 Length = 959 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 119/311 (38%), Gaps = 42/311 (13%) Query: 132 DTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQ 191 D ID RD F +K+L Y+++ E +F Y+ T Sbjct: 3 DIIIDLSRDSKFDELGLKRLRESYMMRE----ETSPQERFAYVCKQV--------GTDRD 50 Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQR 251 + +R Y+ S +SL TPI+S + SC L I T ++ +S+ Sbjct: 51 HSQRLYEYTSKHWLSLSTPILSFGKANHGLPISCYL-------SWIEDTKEGLIDTLSEV 103 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 + + G +G IR + TG + + + Q GVR G+ ++ H Sbjct: 104 NQLSM-LGGGVGVGVGIRTSDNKSTGVMSHLNTYDACSLAYKQDGVRRGSYAMYLNNNHP 162 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFAD 371 +V + ++ G R ++ +G+ I+ E + L D G D D Sbjct: 163 DVLQFIEMRKPTGDHNIRCLNLHHGLNISD---------EFMELIEKCDGGGNID----D 209 Query: 372 QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS-PFDPAI 430 +TK + V A +L+ +++ R TG YI +D CN H F Sbjct: 210 TWNLIDPHTK-------KITTVGARDLWQRILETRMKTGEPYICFIDTCNKHMYDFQKKK 262 Query: 431 A-PVRQSNLCL 440 ++QSNLC+ Sbjct: 263 GLTIKQSNLCV 273 >UniRef50_A2BL44 Ribonucleoside-diphosphate reductase n=2 Tax=Desulfurococcales RepID=A2BL44_HYPBU Length = 991 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 12/141 (8%) Query: 445 PTKPLNDVNDEN--GEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDAL 492 PT L V N GE L + NLG+++ +L + LAV ++DA+ Sbjct: 453 PTPWLGAVYATNPCGEQPLYPFESCNLGSMSIDKYISDGKFDLAQFMSDIQLAVDSMDAV 512 Query: 493 LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLL 552 +D+ +P P R +G+G++ A LAK G Y A T A++ Y Sbjct: 513 IDFNKHPDPRQTVANKFTRKIGLGIMGLADALAKLGYPYDSEEAVAFTLIVMAALEVYSW 572 Query: 553 KASNELAKEQGACPWFNETTY 573 K S EL + G P F Y Sbjct: 573 KRSWELGAKLGHAPAFECRRY 593 >UniRef50_B1I483 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I483_DESAP Length = 1121 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 9/121 (7%) Query: 462 CTLSAFNL---------GAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRT 512 C L + NL G + + + L + L +R LD L+D +YP+ R Sbjct: 655 CLLGSVNLARMLKPGRDGYVVDWELLRDTVRLGIRFLDNLIDVAEYPLEFIAEATRATRK 714 Query: 513 LGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETT 572 +G+G L K G Y F+A+Q L S ELA E+G P + + Sbjct: 715 VGLGYTGLHDLLIKMGLPYDAEEGRRFAGTVFKAVQDAALAYSRELAGERGCFPEWERSV 774 Query: 573 Y 573 + Sbjct: 775 F 775 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 14/224 (6%) Query: 143 FSYAAVKQLEGKYLV---QNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDA 199 S + K E +Y Q RVT E +E Q ++ L + ++ R + ++F + Sbjct: 7 LSDSGQKVFEARYAAKDEQGRVT-ETFE--QAVHRLARTTALAEKAQD-RAAWEEKFAAS 62 Query: 200 VSTFKISLPTPIMSGVRTPTR--QFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGIN 257 + TPI + + R Q +C ++ DSL+S+ T G+G N Sbjct: 63 IGGLLFVPSTPIWANIGKTDRPWQPGACFVLAVEDSLESMYQTLKDTAMVFKSGGGVGYN 122 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 IR GS +R + +G + + + + QGGVR GA+ + H E+ + Sbjct: 123 FSAIRPRGSMVRSTKGQASGVVELIRLYDASSGMVMQGGVRRGASMGILNIDHPEIIHFI 182 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDV 361 K G + H + V + L + ED L +V Sbjct: 183 NSKR-----GGDITHFNLSVGVTDAFMEALERDEDWPLVFNGEV 221 >UniRef50_C9MSK4 Ribonucleoside-diphosphate reductase n=8 Tax=Prevotella RepID=C9MSK4_9BACT Length = 902 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 4/106 (3%) Query: 222 FSSCVLIEC---GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 S+C +I DS +I V+ + +R G+G + IR GSP+ TG Sbjct: 140 LSNCFVIGLDGDADSYGAILRIDEEQVQLMKRRGGVGHDLSHIRPKGSPVHNSALTSTGL 199 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 +PF + + + + +Q G R GA L + H + E+ + K G Sbjct: 200 VPFMERYSNSTREVAQDG-RRGALMLSVSIKHPDSEAFIDAKMEEG 244 >UniRef50_Q0A8L7 Ribonucleoside-diphosphate reductase n=3 Tax=Ectothiorhodospiraceae RepID=Q0A8L7_ALHEH Length = 1095 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 23/192 (11%) Query: 467 FNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAK 526 F A + E E+ + R LD +++ P+ +R +R G+G + L Sbjct: 729 FTEKARFDWQEYAEVVSVFTRMLDNVVEINGLPLDEQRREIERKRRHGMGFLGLGSTLTM 788 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNET-TYAKGIL------P 579 +Y + + T K + + ELA+E+G P +ET T + +L Sbjct: 789 LRMKYGEAESLAFTEKVSREMALAGWRTGVELAEEKGPAPIMDETYTVDEAMLAKRPEMA 848 Query: 580 IDTYKKDLDTIANEPL-----HY-------DWEALRESIKTHGLRNSTLSALMPSETS-- 625 +D YK D + L HY D E L E+I G R S +++ P+ T Sbjct: 849 VDGYKVG-DKVKGRVLLARYSHYMQRVAEVDAE-LVEAIAEKGARFSHHTSIAPTGTISL 906 Query: 626 SQISNATNGIEP 637 S +NA+NGIEP Sbjct: 907 SLANNASNGIEP 918 >UniRef50_C7LZ05 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ05_ACIFD Length = 1331 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 79/334 (23%), Positives = 122/334 (36%), Gaps = 66/334 (19%) Query: 465 SAFNLGAINNLDELEE-----------LAILAVRALDALLDYQDYPIPAAKRGAMGRRTL 513 S+ NL +IN L L+E A + + A D L DYP P + R L Sbjct: 760 SSCNLASINLLAYLDEDGNFDVEGFRHTARVLITAQDILAGNADYPTPRIAETSRAYRQL 819 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTY 573 G+G N L G Y + + S ELA+ G P+ Sbjct: 820 GLGYANLGAMLMALGLPYDSDGGRAYAAAVTALMTGAAYERSAELAERLG--PFAGYADD 877 Query: 574 AKGILPIDTYKKD-LDTIANEP------LHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 A+ +L + +D L + P W+ G+RN+ S L P+ T Sbjct: 878 AESMLRVLGMHRDALAKVDGAPEAIVEAARASWDMAIARASEVGVRNAQASLLAPTGTIG 937 Query: 627 QISNA-TNGIEPPRGYVSIKASKDG----ILRQVVPD-----------------YEHLHD 664 + + T GIEP V K G I+ Q VP Y HD Sbjct: 938 FLMDCDTTGIEPDFSLVKYKTLVGGGTMKIVNQTVPRALRTLGYPEHEIDQITAYLAEHD 997 Query: 665 A----------YELLW-----EMP-GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGK 708 + +E ++ E P G+L ++G +Q F+ +IS N PS Sbjct: 998 SIVGAPGLKPEHEAVFACAVGEYPISPTGHLAMMGAVQPFLSGAISKTVN-----LPSTS 1052 Query: 709 VPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQ 742 ++ + + L A++ G+K + RDG++ Q Sbjct: 1053 T-VEDVEQTYLDAWRLGIKAVALY--RDGSKVGQ 1083 >UniRef50_Q2S696 Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S696_SALRD Length = 932 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 5/160 (3%) Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQR 251 + RFY+ ++ SL +P+ + SC DS+++I T + + Sbjct: 57 FADRFYEYMARGYYSLASPVWANFGLDRGLPISCFGSYIDDSMEAILNTHAEVGMMTKVG 116 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 G G +R G+ I G PF + F + SQG R G + + H Sbjct: 117 GGTSGYFGDVRPRGASITN-NGTSNGTYPFAQLFDKIINVVSQGETRRGHFAGYIDIEHP 175 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 +VE L ++ EG+ ++ M YGV + ++ G+ Sbjct: 176 DVEEWLNIQ----TEGDAIQTMMYGVVVGDDWMEAMIDGD 211 >UniRef50_Q7UI46 Vitamin B12-dependent ribonucleotide reductase n=3 Tax=Planctomycetaceae RepID=NRDJ_RHOBA Length = 1040 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 92/453 (20%), Positives = 161/453 (35%), Gaps = 39/453 (8%) Query: 221 QFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIP 280 Q S+C + D+++ I + + +G G + IR+ + GG +G + Sbjct: 210 QGSACFIQSVDDNMEDIMRLACSEAMLFKFGSGTGTDLSTIRSQREKLSGG-GTPSGPLS 268 Query: 281 FYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQI 339 F + + + GG R A +WH ++ + K + + + Y Sbjct: 269 FMRVYDSIAGVVKSGGKTRRAAKMQSLKVWHPDILEFIECKWAEEKKAHALIREGYDSNF 328 Query: 340 NKLMYTRL-LKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDD-SIRKQRVKAVE 397 N Y + + ++++ L D + + E T++ D + A E Sbjct: 329 NGEAYASVCFQNANLSVR-------LTDDYMEAVRKNENFQTRWITDKPTTEPPSYVAKE 381 Query: 398 LFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENG 457 L + M + G +Q N P + SN C E L+D Sbjct: 382 LLNKMAECAWHCGDPGVQYDTTINKWHTC-PNSGAINASNPCSEYMF----LDDT----- 431 Query: 458 EIALCTLSAFNLGAINNLDEL--EELAILAVR----ALDALLDYQDYPIPAAKRGAMGRR 511 C L++ NL D E A R A + L+D+ YP R + R Sbjct: 432 ---ACNLASINLMKFVQQDGSFDHERFRAACRTFFIAQEILVDHASYPTEPIARNSHKFR 488 Query: 512 TLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNET 571 LG+G N + G Y +A + + + S ELA G + E Sbjct: 489 PLGLGYSNLGSVIMTAGLPYDSDAARGMCGSLTALLHGEANRTSAELASVVGTFDGYVEN 548 Query: 572 TYAKGILPIDTYKKDLDTIAN-------EPLHYDWEALRESIKTHGLRNSTLSALMPSET 624 A + + ++ D I + E W+ + E + +G RN+ + L P+ T Sbjct: 549 E-APMLRVMQMHRDACDQINDDGPAELKEAARELWDGVLEIGEKYGFRNAQATVLAPTGT 607 Query: 625 SSQISNA-TNGIEPPRGYVSIKASKDGILRQVV 656 S + + T GIEP V K G + ++V Sbjct: 608 ISFMMDCDTTGIEPDIALVKYKQLAGGGMLKIV 640 >UniRef50_C9LGY8 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Prevotella RepID=C9LGY8_9BACT Length = 727 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELR--SHIQFYDGIKTSDIHE 60 +N ++TKRDG+TER +LDKI + A LH +Q R H++F +G+ DI Sbjct: 29 ENFIITKRDGTTERFSLDKIKSAILKAFTSLHQPIDAQGLQRVIEHLRFCNGMSVEDIQN 88 Query: 61 TI 62 + Sbjct: 89 QV 90 >UniRef50_C9DFZ9 Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Deftia phage phiW-14 RepID=C9DFZ9_9CAUD Length = 711 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 119/599 (19%), Positives = 204/599 (34%), Gaps = 115/599 (19%) Query: 188 TRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFS----SCVLIECGDSLDSINATSSA 243 + L + +R YD S +P S P + SC L + DS+ Sbjct: 52 SNLAHAQRLYDYASKDDFIWASPAFSNATLPGEKIRAMPISCFLPDVPDSV-------PG 104 Query: 244 IVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAAT 303 ++ ++ + + + G + IR G IPF +A+ + QG +R GA + Sbjct: 105 LLYQKAELSLLSVLGGGVGQNFGGIRSVSDKAPGPIPFIAENDSAILAWKQGKIRRGALS 164 Query: 304 LFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKG-EDITLFSPSDVP 362 + H + + ++ G + ++ +G + ++ G E + L P+ Sbjct: 165 ANLGVTHPDTMEFMRIRVPTGDIERKSLNIHHGFNVTDEYMQAVVDGIETLPLIDPT--- 221 Query: 363 GLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNT 422 G +E F + T R+ TG ++ +D Sbjct: 222 GKQVGSMNPREHFREMVTV------------------------RSRTGEPFMYFIDRAQE 257 Query: 423 HSPFDPAI--APVRQSNLCLEIAL-------PTKPLNDVNDENGEIALCTLSAFNLGAIN 473 + + + +N+C EI L P L +N E E I Sbjct: 258 YLSLPQKLIGMACKATNICTEITLAATKDRTPVCCLCSINAERYEDFKPYYQEMVSDLIE 317 Query: 474 NLDELEELAILAV-RALDALLDYQDYP-----IPAAKRGAMGRRTLGIGVINFAYYLAKH 527 LD + E + V + + D D + K+ A R++G+GV+ AY L + Sbjct: 318 MLDNIIEFFVQNVEKVAEGYADQLDRDLIRLLVQKVKKSAECERSVGLGVMGLAYMLQRA 377 Query: 528 GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDL 587 ++ + + F ++ + AS L E+G P I Y + Sbjct: 378 DMVFAGEDSREYELEFFRQLKDFSHAASCRLGIERGVPP------------DIQAYLEKC 425 Query: 588 DTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS 647 + EP Y W RN L A+ P+ SS I N + IE V + Sbjct: 426 KELGIEPDPY-WV---------NRRNLHLLAIAPNANSSVILNTSASIEFMYSNVYSREM 475 Query: 648 KDG----------------------ILRQVVPD----------YEHLHDAYELLWEMPGN 675 + G + Q+ D EH Y + EM Sbjct: 476 RTGTFEVRNRYLEKLLESQGRNTEEVWNQIKADSGSVKGLDFLTEHQKRVYAVPEEMNMM 535 Query: 676 DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNT 734 D ++ G Q +I Q+ S N FP G + ++ + A+K GVK+LYY T Sbjct: 536 DVVVR-AGERQVYICQAQSLNLF-----FPPGS-DINFVMAVHILAWKVGVKSLYYYKT 587 >UniRef50_D1Y8J0 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8J0_9BACT Length = 894 Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust. Identities = 134/650 (20%), Positives = 236/650 (36%), Gaps = 142/650 (21%) Query: 173 YILVAACLFSNYPRETRL-QYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG 231 +I + CLF++ TR+ + + Y + +++ + G +T +Q +C +I+ Sbjct: 99 FIFNSPCLFASGAGMTRVPELAELIYRSPDEMELADYRRLYDG-KTDNQQLFACFVIDIP 157 Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFH-TGCIPFYKHFQTAVK 290 DS++ I + A G+G N GR+R G+ I+GG +G + F + + T Sbjct: 158 DSIEGIFDSVRAAAVISKYGGGVGGNFGRLRERGADIKGGTGGKASGPVSFMETWNTMGC 217 Query: 291 SCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKG 350 QGG R A P H ++E + K G KL Y Sbjct: 218 VVVQGGRRRAALMGMLPDDHPDIEQFMDAKTEEG----------------KLSYF----- 256 Query: 351 EDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQ---ERA 407 +I++ ++ G A +E +R + + + + V EL++ + Q R Sbjct: 257 -NISVCVSDELVG------AARE--KRPFALRSRANGKVVRTVSGDELWNKLCQNAWRRG 307 Query: 408 STGRIYIQNVDHCN---THSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTL 464 G +I + N FD + +N C E LPT C L Sbjct: 308 DPGVFFIDRANDDNLLKLSGDFD-----IESTNPCGEQPLPT------------YTSCNL 350 Query: 465 SAFNLGAINNLDE-------LEELAILAVRA---LDALLDYQDYPIPAAKRGAMGRRTLG 514 + NL DE +E R+ LD ++D YP+ R +G Sbjct: 351 GSVNLVKFVRPDETGRQSFDMEGFMDQVYRSIYYLDLVIDATSYPLQRIGERTKRIRPVG 410 Query: 515 IGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW------- 567 +G++ A G Y S + + L A+ + G P+ Sbjct: 411 LGLMGLADAAILSGDVYGSESFKSFCDSLGAHMAGAALMATVDAVAHMGKEPFSESFAVA 470 Query: 568 --FNETTYAKG----------ILPIDTYKKDL---------------------DTIANEP 594 F E A G + +++Y++ + D + +E Sbjct: 471 RLFEEEHRAHGGELFARQWIDEMDLNSYREFIARMRTHGQVPYTLLNTLEILPDVLGDEA 530 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGY----VSIKASKDG 650 L + + L ++ LRNS ++ P+ + S I +++ GIEP + +K+ DG Sbjct: 531 LP-ELKRLMTALLEGKLRNSRRLSIAPTGSISMIFDSSAGIEPNFAWRWSRKVMKSDGDG 589 Query: 651 ILRQVVPDYEHLHDAYELLWEMPGN----------------DGYLQLVGIMQKFIDQSIS 694 V +Y H + E+ G+ + ++ + GI +++D IS Sbjct: 590 ---WEVREYFHPLITQKEADELRGSGVISDPRYVTAYDISPEQHVDVTGIFARYVDSGIS 646 Query: 695 ANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQ 742 N S + + K T Y G K T+Y RDG+ D Q Sbjct: 647 KTVNL------SSSATVDDVRKVYETCYDMGCKGITIY----RDGSRDNQ 686 >UniRef50_B9Y435 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y435_9FIRM Length = 379 Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust. Identities = 24/108 (22%), Positives = 44/108 (40%) Query: 213 SGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGE 272 +G T F+ V+ DS I +++ +S+ G+G N +R +P +G Sbjct: 174 AGSGTQVTYFNCFVMPFVEDSRGGIAEHRKEVMEIMSRGGGVGTNGSTLRPKHAPAKGVG 233 Query: 273 AFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 +G + + QGG R GA + WH ++ ++ K Sbjct: 234 GRSSGAVSWLNDIANLTNLVEQGGSRRGAQMIMLADWHPDIIEFIISK 281 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P00452 Ribonucleoside-diphosphate reductase 1 subunit a... 1001 0.0 UniRef50_Q8K9W3 Ribonucleoside-diphosphate reductase subunit alp... 893 0.0 UniRef50_C8WWY9 Ribonucleoside-diphosphate reductase n=15 Tax=Fi... 798 0.0 UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alp... 798 0.0 UniRef50_P23921 Ribonucleoside-diphosphate reductase large subun... 776 0.0 UniRef50_A8P6Y3 Ribonucleoside-diphosphate reductase n=1 Tax=Bru... 772 0.0 UniRef50_P48591 Ribonucleoside-diphosphate reductase large subun... 770 0.0 UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 768 0.0 UniRef50_C1FEX6 Ribonucleoside-diphosphate reductase n=4 Tax=Chl... 761 0.0 UniRef50_C5LWW8 Ribonucleoside-diphosphate reductase n=4 Tax=Euk... 757 0.0 UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alp... 752 0.0 UniRef50_D1CID8 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 741 0.0 UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=ce... 726 0.0 UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subu... 722 0.0 UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=ce... 722 0.0 UniRef50_D1BPH5 Ribonucleoside-diphosphate reductase n=3 Tax=Vei... 714 0.0 UniRef50_C8XUI7 NrdA ribonucleoside-diphosphate reductase alpha ... 713 0.0 UniRef50_Q9QAL9 Ribonucleoside-diphosphate reductase n=2 Tax=Shr... 705 0.0 UniRef50_A9KRT3 Ribonucleoside-diphosphate reductase n=2 Tax=Clo... 700 0.0 UniRef50_A4XD09 Ribonucleoside-diphosphate reductase n=44 Tax=Ba... 700 0.0 UniRef50_Q75BW6 Ribonucleoside-diphosphate reductase n=2 Tax=Sac... 699 0.0 UniRef50_C5DEU8 Ribonucleoside-diphosphate reductase n=2 Tax=Sac... 696 0.0 UniRef50_Q8JKL8 Ribonucleoside-diphosphate reductase n=1 Tax=Hel... 694 0.0 UniRef50_C5DY80 Ribonucleoside-diphosphate reductase n=1 Tax=Zyg... 691 0.0 UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alp... 689 0.0 UniRef50_C7NLI3 Ribonucleoside-diphosphate reductase n=1 Tax=Kyt... 687 0.0 UniRef50_D2E8G7 Ribonucleoside-diphosphate reductase n=1 Tax=Ang... 682 0.0 UniRef50_C1VDU7 Ribonucleoside-diphosphate reductase n=1 Tax=Hal... 669 0.0 UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Ba... 667 0.0 UniRef50_B7FY00 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 664 0.0 UniRef50_B0R7R5 Ribonucleoside-diphosphate reductase n=2 Tax=Hal... 664 0.0 UniRef50_P74240 Ribonucleoside-diphosphate reductase subunit alp... 660 0.0 UniRef50_C7NVI1 Ribonucleoside-diphosphate reductase n=2 Tax=Hal... 658 0.0 UniRef50_Q7T6Y8 Ribonucleoside-diphosphate reductase large subun... 656 0.0 UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Ba... 653 0.0 UniRef50_C9KMB2 Ribonucleoside-diphosphate reductase n=1 Tax=Mit... 650 0.0 UniRef50_B9L2K7 Ribonucleoside-diphosphate reductase n=1 Tax=The... 649 0.0 UniRef50_A5TVY2 Ribonucleoside-diphosphate reductase n=15 Tax=Fu... 642 0.0 UniRef50_C4V8X4 Ribonucleoside-diphosphate reductase n=1 Tax=Nos... 639 0.0 UniRef50_B7SW23 Ribonucleoside-diphosphate reductase n=1 Tax=Spo... 639 0.0 UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alp... 636 e-180 UniRef50_O12935 Ribonucleoside-diphosphate reductase n=1 Tax=Spo... 634 e-180 UniRef50_B7XJ88 Ribonucleoside-diphosphate reductase n=2 Tax=Ent... 630 e-179 UniRef50_Q2P8D3 Ribonucleoside-diphosphate reductase n=66 Tax=ro... 623 e-177 UniRef50_B3RGP4 Ribonucleoside triphosphate reductase alpha chai... 616 e-175 UniRef50_A2PYM5 Ribonucleoside-diphosphate reductase n=4 Tax=Myo... 612 e-173 UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Bra... 610 e-173 UniRef50_B2V806 Ribonucleoside-diphosphate reductase n=2 Tax=Aqu... 604 e-171 UniRef50_UPI000194E523 PREDICTED: ribonucleoside-diphosphate red... 598 e-169 UniRef50_Q66LW9 Ribonucleoside-diphosphate reductase 1 alpha cha... 595 e-168 UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Cal... 586 e-166 UniRef50_A7KUZ9 Nrd alpha subunit n=2 Tax=root RepID=A7KUZ9_9CAUD 583 e-164 UniRef50_Q8SCK6 PHIKZ306 n=2 Tax=phiKZ-like viruses RepID=Q8SCK6... 558 e-157 UniRef50_B4UA32 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 556 e-157 UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Su... 548 e-154 UniRef50_A9WCH6 Ribonucleoside-diphosphate reductase n=3 Tax=Chl... 541 e-152 UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 534 e-150 UniRef50_UPI0001792B32 PREDICTED: similar to AGAP010198-PA n=1 T... 532 e-149 UniRef50_Q1IXG5 Ribonucleoside-diphosphate reductase n=6 Tax=Bac... 529 e-148 UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Met... 527 e-148 UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyd... 527 e-148 UniRef50_B8HJ14 Ribonucleoside-diphosphate reductase n=158 Tax=r... 526 e-147 UniRef50_P0A5W9 Ribonucleoside-diphosphate reductase subunit alp... 524 e-147 UniRef50_B0KCF5 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 522 e-146 UniRef50_B7R7T8 Ribonucleoside-diphosphate reductase n=2 Tax=The... 521 e-146 UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 519 e-145 UniRef50_A3EPA5 Ribonucleoside-diphosphate reductase n=3 Tax=Lep... 519 e-145 UniRef50_B8J271 Ribonucleoside-diphosphate reductase n=11 Tax=Ba... 519 e-145 UniRef50_C5WF13 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 517 e-145 UniRef50_P26685 Ribonucleoside-diphosphate reductase large subun... 517 e-145 UniRef50_Q6R7H4 Ribonucleoside-diphosphate reductase large subun... 516 e-144 UniRef50_B5Y7X0 Ribonucleoside-diphosphate reductase n=1 Tax=Cop... 514 e-144 UniRef50_Q3ZZA0 Ribonucleoside-diphosphate reductase n=27 Tax=ce... 513 e-144 UniRef50_D1CDG6 Ribonucleoside-diphosphate reductase n=1 Tax=The... 509 e-142 UniRef50_P50620 Ribonucleoside-diphosphate reductase subunit alp... 504 e-141 UniRef50_B5YGJ2 Ribonucleoside-diphosphate reductase n=12 Tax=ce... 504 e-141 UniRef50_P78027 Ribonucleoside-diphosphate reductase subunit alp... 502 e-140 UniRef50_C1A6X4 Ribonucleoside-diphosphate reductase n=1 Tax=Gem... 501 e-140 UniRef50_Q67KQ2 Ribonucleoside-diphosphate reductase n=1 Tax=Sym... 500 e-140 UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=The... 496 e-138 UniRef50_B1V8V8 Ribonucleoside-diphosphate reductase n=61 Tax=Ba... 496 e-138 UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Ali... 493 e-137 UniRef50_C1D7Z3 Ribonucleoside-diphosphate reductase n=5 Tax=Bet... 493 e-137 UniRef50_D0ME23 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 492 e-137 UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 491 e-137 UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyr... 490 e-137 UniRef50_B2A494 Ribonucleoside-diphosphate reductase n=16 Tax=ce... 490 e-136 UniRef50_C3XAC6 Ribonucleoside-diphosphate reductase n=3 Tax=Bet... 487 e-136 UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=My... 487 e-136 UniRef50_Q160T8 Ribonucleoside-diphosphate reductase n=25 Tax=Al... 484 e-135 UniRef50_D2BQ84 Ribonucleoside-diphosphate reductase n=32 Tax=La... 482 e-134 UniRef50_C6P0N4 Ribonucleoside-diphosphate reductase, adenosylco... 482 e-134 UniRef50_A7I485 Ribonucleoside-diphosphate reductase n=6 Tax=Met... 481 e-134 UniRef50_A8LK99 Ribonucleoside-diphosphate reductase n=25 Tax=Ba... 477 e-133 UniRef50_Q8SCB8 Large subunit ribonucleotide reductase n=6 Tax=u... 476 e-132 UniRef50_B1XZE5 Ribonucleoside-diphosphate reductase n=11 Tax=Be... 475 e-132 UniRef50_Q2LW62 Ribonucleoside-diphosphate reductase n=1 Tax=Syn... 475 e-132 UniRef50_B1HSG6 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 472 e-131 UniRef50_A2DI13 Ribonucleoside-diphosphate reductase n=1 Tax=Tri... 471 e-131 UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=ce... 469 e-130 UniRef50_Q2T3W9 Ribonucleotide reductase system n=37 Tax=Burkhol... 469 e-130 UniRef50_C6D5S5 Ribonucleoside-diphosphate reductase, adenosylco... 462 e-128 UniRef50_C6IVG4 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 461 e-128 UniRef50_Q6AJC4 Ribonucleoside-diphosphate reductase n=1 Tax=Des... 458 e-127 UniRef50_B4W8S5 Ribonucleoside-diphosphate reductase n=2 Tax=Cau... 456 e-126 UniRef50_C6QBB0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyp... 450 e-125 UniRef50_Q2RP92 Ribonucleotide reductase large subunit n=1 Tax=R... 448 e-124 UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=ce... 447 e-124 UniRef50_B3SZX1 Putative Ribonucleotide reductase, barrel domain... 447 e-124 UniRef50_Q76Z42 NrdA-A aerobic NDP reductase large subunit n=1 T... 445 e-123 UniRef50_Q11ZE1 Ribonucleotide reductase large subunit n=2 Tax=B... 444 e-123 UniRef50_Q2N7C2 Ribonucleoside-diphosphate reductase n=90 Tax=ro... 442 e-122 UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hyd... 442 e-122 UniRef50_Q3SMN2 Ribonucleoside-diphosphate reductase n=1 Tax=Thi... 441 e-122 UniRef50_P09853 Ribonucleoside-diphosphate reductase large subun... 437 e-121 UniRef50_C4NT50 Putative ribonucleoside-diphosphate redutase n=2... 435 e-120 UniRef50_A7HK53 Ribonucleoside-diphosphate reductase n=11 Tax=Th... 435 e-120 UniRef50_Q120H3 Ribonucleotide reductase large subunit n=1 Tax=P... 434 e-120 UniRef50_C4RH87 Ribonucleoside-diphosphate reductase n=1 Tax=Mic... 432 e-119 UniRef50_Q21U31 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 429 e-118 UniRef50_B9KZV2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 426 e-117 UniRef50_Q6UDJ2 Ribonucleoside-diphosphate reductase n=2 Tax=Ilt... 424 e-116 UniRef50_B7KJK7 Ribonucleoside-diphosphate reductase n=4 Tax=Cya... 422 e-116 UniRef50_D2EFV5 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 419 e-115 UniRef50_A7IY07 Ribonucleoside-diphosphate reductase n=3 Tax=Chl... 416 e-114 UniRef50_Q6VMN2 Ribonucleoside-diphosphate reductase n=10 Tax=To... 415 e-114 UniRef50_Q8V6N4 Ribonucleotide reductase n=2 Tax=Haloviruses Rep... 413 e-113 UniRef50_A4IY36 Ribonucleoside-diphosphate reductase n=26 Tax=ro... 404 e-111 UniRef50_A4VFR5 Ribonucleoside-diphosphate reductase n=32 Tax=Pr... 403 e-110 UniRef50_Q5DN91 Ribonucleotide reductase n=1 Tax=Phage phiJL001 ... 400 e-109 UniRef50_B1HS20 Ribonucleoside-diphosphate reductase n=28 Tax=Ba... 399 e-109 UniRef50_Q66663 Ribonucleoside-diphosphate reductase n=8 Tax=roo... 389 e-106 UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=... 388 e-106 UniRef50_Q77MS1 Ribonucleoside-diphosphate reductase n=9 Tax=Her... 385 e-105 UniRef50_C6JQA3 Putative uncharacterized protein n=2 Tax=Fusobac... 382 e-104 UniRef50_Q01037 Ribonucleoside-diphosphate reductase large subun... 382 e-104 UniRef50_A5FCJ4 Ribonucleoside-diphosphate reductase, alpha chai... 381 e-104 UniRef50_A9J500 Putative uncharacterized protein gp07 n=2 Tax=un... 380 e-103 UniRef50_P50643 Ribonucleoside-diphosphate reductase large subun... 376 e-102 UniRef50_A0MN59 Ribonucleotide reductase alpha subunit n=1 Tax=T... 375 e-102 UniRef50_C9L7Y1 Ribonucleoside-diphosphate reductase, adenosylco... 374 e-102 UniRef50_C6LFM8 Ribonucleoside-diphosphate reductase, adenosylco... 374 e-102 UniRef50_O41962 Ribonucleoside-diphosphate reductase n=3 Tax=Mur... 373 e-101 UniRef50_B9LSK3 Ribonucleoside-diphosphate reductase n=9 Tax=roo... 373 e-101 UniRef50_Q3KSU5 Ribonucleoside-diphosphate reductase large subun... 373 e-101 UniRef50_D0J9D2 Ribonucleoside-diphosphate reductase n=2 Tax=Bla... 372 e-101 UniRef50_Q196Z5 Ribonucleoside-diphosphate reductase large subun... 371 e-101 UniRef50_B2UIU6 Ribonucleoside-diphosphate reductase n=3 Tax=Ral... 367 e-100 UniRef50_C9LXZ2 Ribonucleoside-diphosphate reductase, adenosylco... 366 2e-99 UniRef50_Q6MNP6 Vitamin B12-dependent ribonucleotide reductase n... 363 1e-98 UniRef50_C9M6M1 Ribonucleoside-diphosphate reductase, adenosylco... 359 2e-97 UniRef50_B6YRR4 Ribonucleoside-diphosphate reductase n=21 Tax=ro... 359 3e-97 UniRef50_C8WXT6 Ribonucleoside-diphosphate reductase, adenosylco... 358 5e-97 UniRef50_D2RTR9 Ribonucleoside-diphosphate reductase, adenosylco... 356 2e-96 UniRef50_C1XXN0 Ribonucleoside-diphosphate reductase n=1 Tax=Mei... 356 2e-96 UniRef50_Q5L9C8 Ribonucleoside-diphosphate reductase n=26 Tax=Ba... 355 3e-96 UniRef50_Q2S5T5 Ribonucleoside-diphosphate reductase, adenosylco... 354 7e-96 UniRef50_D2R4B9 Ribonucleoside-diphosphate reductase, adenosylco... 348 3e-94 UniRef50_O69981 Vitamin B12-dependent ribonucleotide reductase n... 347 1e-93 UniRef50_B0C346 Ribonucleoside-diphosphate reductase, adenosylco... 338 4e-91 UniRef50_B4RFH2 Ribonucleoside-diphosphate reductase alpha chain... 337 1e-90 UniRef50_D2XAL3 Ribonucleoside diphosphate reductase alpha subun... 335 3e-90 UniRef50_A5EVD2 Ribonucleotide reductase, alpha subunit n=30 Tax... 335 6e-90 UniRef50_Q1J1T0 Ribonucleoside-diphosphate reductase n=3 Tax=Dei... 334 7e-90 UniRef50_B4D0S2 Ribonucleoside-diphosphate reductase, adenosylco... 329 2e-88 UniRef50_A2BL44 Ribonucleoside-diphosphate reductase n=2 Tax=Des... 316 1e-84 UniRef50_UPI000155436D hypothetical protein ORF029 n=1 Tax=Pseud... 310 1e-82 UniRef50_Q3AEA3 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 309 3e-82 UniRef50_UPI00019240FD PREDICTED: similar to ribonucleotide-diph... 307 1e-81 UniRef50_D1JF25 Ribonucleoside-diphosphate reductase n=1 Tax=unc... 305 3e-81 UniRef50_UPI0001923DF2 PREDICTED: hypothetical protein, partial ... 303 1e-80 UniRef50_D1ABC6 Ribonucleoside-diphosphate reductase, adenosylco... 303 2e-80 UniRef50_Q97K72 Ribonucleotide reductase, vitamin B12-dependent ... 289 2e-76 UniRef50_C4XRN9 Ribonucleoside-diphosphate reductase n=2 Tax=Des... 288 5e-76 UniRef50_O26748 Ribonucleoside-diphosphate reductase n=1 Tax=Met... 288 5e-76 UniRef50_A7IYE5 Putivate ribonucleotide reductase n=5 Tax=root R... 288 6e-76 UniRef50_Q18GD3 Ribonucleoside-diphosphate reductase n=1 Tax=Hal... 288 6e-76 UniRef50_Q19CR5 Ribonucleotide reductase A subunit n=3 Tax=uncla... 287 1e-75 UniRef50_B8G0R6 Ribonucleoside-diphosphate reductase n=5 Tax=Bac... 286 2e-75 UniRef50_C9RBG7 Ribonucleoside-diphosphate reductase n=1 Tax=Amm... 285 5e-75 UniRef50_O31875 Bsu nrdEB intein n=33 Tax=root RepID=NRDEB_BACSU 278 5e-73 UniRef50_Q3JIM4 Ribonucleoside reductase, intein-containing n=47... 278 8e-73 UniRef50_B2KX75 Ribonucleoside-diphosphate reductase n=2 Tax=Spo... 277 1e-72 UniRef50_A4WLF4 Ribonucleoside-diphosphate reductase n=2 Tax=The... 275 5e-72 UniRef50_UPI00004BA6C5 truncated ribonucleoside-diphosphate redu... 265 4e-69 UniRef50_D1GPW6 Ribonucleoside-diphosphate reductase n=1 Tax=Sta... 265 4e-69 UniRef50_B2UNR7 Ribonucleoside-diphosphate reductase, adenosylco... 263 2e-68 UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=The... 258 6e-67 UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=The... 258 8e-67 UniRef50_B1I483 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 251 5e-65 UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyr... 248 9e-64 UniRef50_B6IYQ9 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 246 3e-63 UniRef50_A1TJY2 Ribonucleoside-diphosphate reductase, adenosylco... 246 3e-63 UniRef50_D2LPU1 Ribonucleotide reductase large subunit n=3 Tax=E... 240 1e-61 UniRef50_Q122S1 Ribonucleoside reductase n=3 Tax=Proteobacteria ... 223 2e-56 UniRef50_O55716 IIV-6 RIR1 intein n=1 Tax=Invertebrate iridescen... 213 2e-53 UniRef50_Q91TP4 T45 n=1 Tax=Tupaiid herpesvirus 1 RepID=Q91TP4_T... 203 2e-50 UniRef50_Q39UD5 Ribonucleotide reductase large subunit n=3 Tax=c... 197 1e-48 UniRef50_Q5SM68 Ribonucleoside-diphosphate reductase n=6 Tax=The... 196 3e-48 UniRef50_O55567 P25 n=1 Tax=Leucania separata nuclear polyhedros... 189 3e-46 UniRef50_Q9RRW1 Ribonucleoside-diphosphate reductase n=1 Tax=Dei... 188 8e-46 UniRef50_P16782 Ribonucleoside-diphosphate reductase large subun... 185 4e-45 UniRef50_P52343 Ribonucleoside-diphosphate reductase large subun... 183 2e-44 UniRef50_B3UXH6 Ribonucleotide reductase n=7 Tax=Murid herpesvir... 178 6e-43 UniRef50_P50641 Ribonucleoside-diphosphate reductase large subun... 175 4e-42 UniRef50_B7TPW4 GP45 n=1 Tax=Caviid herpesvirus 2 RepID=B7TPW4_9... 157 1e-36 UniRef50_Q0ILJ1 NrdA (Fragment) n=10 Tax=unclassified T4-like vi... 147 1e-33 UniRef50_Q9DWE5 PR45 n=1 Tax=Rat cytomegalovirus Maastricht RepI... 142 5e-32 UniRef50_C6BQC0 Ribonucleotide reductase alpha subunit-like prot... 100 4e-19 UniRef50_Q0ILH0 NrdA (Fragment) n=1 Tax=Enterobacteria phage TuI... 95 1e-17 UniRef50_Q30CC9 Ribonucleoside diphosphate reductase large subun... 81 1e-13 Sequences not found previously or not previously below threshold: UniRef50_C9MSK4 Ribonucleoside-diphosphate reductase n=8 Tax=Pre... 354 7e-96 UniRef50_D0LZM4 Ribonucleoside-diphosphate reductase, adenosylco... 345 4e-93 UniRef50_A7HCF4 Ribonucleoside-diphosphate reductase, adenosylco... 339 3e-91 UniRef50_Q7UI46 Vitamin B12-dependent ribonucleotide reductase n... 331 8e-89 UniRef50_D1Y8J0 Ribonucleoside-diphosphate reductase, adenosylco... 326 2e-87 UniRef50_Q1ISM3 Ribonucleoside-diphosphate reductase n=3 Tax=Bac... 319 2e-85 UniRef50_C1F6S8 Ribonucleoside-diphosphate reductase, adenosylco... 306 2e-81 UniRef50_D1C7D7 Ribonucleoside-diphosphate reductase, adenosylco... 301 7e-80 UniRef50_B9L1R5 B12-dependent ribonucleoside diphosphate reducta... 290 1e-76 UniRef50_Q897Z5 Ribonucleoside-diphosphate reductase (Vitamin B1... 277 9e-73 UniRef50_C6BZ68 Ribonucleoside-diphosphate reductase n=1 Tax=Des... 272 4e-71 UniRef50_C9DFZ9 Ribonucleotide-diphosphate reductase subunit alp... 267 1e-69 UniRef50_Q0A8L7 Ribonucleoside-diphosphate reductase n=3 Tax=Ect... 221 6e-56 UniRef50_B8GMT3 Ribonucleoside-diphosphate reductase n=3 Tax=Thi... 217 8e-55 UniRef50_A3JKM6 Ribonucleoside reductase n=1 Tax=Marinobacter sp... 205 5e-51 UniRef50_Q8UEM4 Vitamin B12-dependent ribonucleotide reductase n... 204 1e-50 UniRef50_A4L245 Ribonucleotide reductase large subunit n=1 Tax=G... 202 6e-50 UniRef50_A3QTY4 Ribonucleotide reductase large subunit n=2 Tax=O... 197 2e-48 UniRef50_C7LZ05 Ribonucleoside-diphosphate reductase, adenosylco... 189 4e-46 UniRef50_Q91ES8 ORF127 RR1 n=2 Tax=Baculoviridae RepID=Q91ES8_GVCP 187 1e-45 UniRef50_C1TR30 Ribonucleoside-diphosphate reductase n=1 Tax=Det... 184 2e-44 UniRef50_Q2S696 Ribonucleoside-diphosphate reductase, alpha chai... 183 2e-44 UniRef50_D0MFS7 Ribonucleoside-diphosphate reductase, adenosylco... 180 2e-43 UniRef50_Q6QXF6 ORF37 n=3 Tax=Baculoviridae RepID=Q6QXF6_GVAS 177 2e-42 UniRef50_Q65357 Putative uncharacterized protein n=1 Tax=Mamestr... 156 3e-36 UniRef50_Q9XD73 Vitamin B12-dependent ribonucleotide reductase (... 155 4e-36 UniRef50_B3QY00 Ribonucleoside-diphosphate reductase, adenosylco... 149 3e-34 UniRef50_B9Y435 Putative uncharacterized protein n=1 Tax=Holdema... 140 2e-31 UniRef50_Q3B5C1 Ribonucleotide reductase family protein n=9 Tax=... 137 1e-30 UniRef50_C9LEN5 Ribonucleoside-diphosphate reductase n=1 Tax=Pre... 127 2e-27 UniRef50_C9DC34 Gp50 n=2 Tax=root RepID=C9DC34_9CAUD 127 2e-27 UniRef50_B8YMB4 Ribonucleoside-diphosphate reductase (Fragment) ... 125 7e-27 UniRef50_O64240 Putative adenosylcobalamin-dependent ribonucleos... 120 2e-25 UniRef50_Q96525 Ribonucleotide reductase RNR1 like protein (Frag... 115 4e-24 UniRef50_Q58N39 Ribonucleotide reductase domain-containing prote... 105 7e-21 UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Ch... 92 7e-17 UniRef50_A6Q367 Probable adenosylcobalamin-dependent ribonucleos... 89 1e-15 UniRef50_B4CZD1 Ribonucleotide-diphosphate reductase subunit alp... 80 4e-13 UniRef50_B9GT86 Predicted protein n=1 Tax=Populus trichocarpa Re... 77 3e-12 >UniRef50_P00452 Ribonucleoside-diphosphate reductase 1 subunit alpha n=228 Tax=root RepID=RIR1_ECOLI Length = 761 Score = 1001 bits (2588), Expect = 0.0, Method: Composition-based stats. Identities = 761/761 (100%), Positives = 761/761 (100%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE 60 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE Sbjct: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE 60 Query: 61 TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL 120 TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL Sbjct: 61 TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL 120 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL Sbjct: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 Query: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT 240 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT Sbjct: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT 240 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG Sbjct: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 Query: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD Sbjct: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 Query: 361 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC 420 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC Sbjct: 361 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC 420 Query: 421 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE 480 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE Sbjct: 421 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE 480 Query: 481 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT Sbjct: 481 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE Sbjct: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE 660 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE Sbjct: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE 660 Query: 661 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT Sbjct: 661 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 Query: 721 AYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 AYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI Sbjct: 721 AYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 >UniRef50_Q8K9W3 Ribonucleoside-diphosphate reductase subunit alpha n=180 Tax=root RepID=RIR1_BUCAP Length = 763 Score = 893 bits (2309), Expect = 0.0, Method: Composition-based stats. Identities = 560/763 (73%), Positives = 669/763 (87%), Gaps = 2/763 (0%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE 60 M +L VTKR+G E+INLDKIH+VL+WAA+GL N+S+SQVELRS IQFY+ I T +IHE Sbjct: 1 MKNSLFVTKRNGKKEKINLDKIHKVLNWAAKGLENISVSQVELRSRIQFYNNISTVNIHE 60 Query: 61 TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL 120 TIIKAAADLIS + PDYQY+AARLAIFHLRKKAYGQFEPP LY HV KMV++GKYD LL Sbjct: 61 TIIKAAADLISENTPDYQYMAARLAIFHLRKKAYGQFEPPNLYYHVKKMVQLGKYDEKLL 120 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 ++Y+ EE+ +M++F+DH RDM FSYAAVKQLE KYL+QNRVTG+IYESAQFLYIL++ACL Sbjct: 121 QNYSFEEYVEMNSFVDHRRDMNFSYAAVKQLEAKYLLQNRVTGQIYESAQFLYILISACL 180 Query: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT 240 FS Y ++ R+ Y++RFY+A+STFKISLPTPIMSGVRTPTRQFSSCVLIEC D+L+SINAT Sbjct: 181 FSKYEKKVRMNYIQRFYNAISTFKISLPTPIMSGVRTPTRQFSSCVLIECADNLNSINAT 240 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 +SAIVKYVSQRAGIGINAG+IRALGSPIR GEAFHTGCIPFYKHFQ+AVKSCSQGGVRGG Sbjct: 241 TSAIVKYVSQRAGIGINAGQIRALGSPIRNGEAFHTGCIPFYKHFQSAVKSCSQGGVRGG 300 Query: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 AAT+FYP+WHLE+ESLLVLKNNRG+E NRVRH+DY VQINKLMY R+L G+ ITLFSPSD Sbjct: 301 AATVFYPIWHLEIESLLVLKNNRGIEENRVRHLDYAVQINKLMYQRMLLGQKITLFSPSD 360 Query: 361 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC 420 VP LY+ FF+DQ++F+ +Y KYEK+ +IRK+ + A++LF L+M+ERASTGRIYIQ+VDHC Sbjct: 361 VPKLYEFFFSDQKKFKEIYIKYEKNRNIRKKSINAIDLFCLIMRERASTGRIYIQHVDHC 420 Query: 421 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE 480 N+HS F+ +A +RQSNLCLEI LPTKPLN+++D+NGEIALCTLSA NLG IN+L +L+E Sbjct: 421 NSHSAFNSKLATIRQSNLCLEITLPTKPLNNIDDKNGEIALCTLSALNLGLINDLHDLKE 480 Query: 481 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 L+ L+VRALD +L+YQ+YP+ AK+ A+ RR+LGIGVINFAYYLAK+ RYSDGSA NLT Sbjct: 481 LSTLSVRALDEILEYQNYPVVCAKKSAISRRSLGIGVINFAYYLAKNKVRYSDGSAKNLT 540 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 HKTFEAIQYYLLKAS ELAKE+G+C FN+T Y G PIDTYKKD+D+I NEPLH +W Sbjct: 541 HKTFEAIQYYLLKASCELAKEKGSCSLFNQTNYYLGKFPIDTYKKDIDSICNEPLHLNWN 600 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE 660 LR+ IK +GLRNSTLSALMPSETSSQISNATNGIEPPRG++SIK+SKDG+LRQVVP+Y+ Sbjct: 601 LLRKKIKKYGLRNSTLSALMPSETSSQISNATNGIEPPRGFISIKSSKDGMLRQVVPEYK 660 Query: 661 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 L YELLWE+P N GYL+LV IMQKF+DQSISANTNYDP RF + K+PM+QL+ DLL Sbjct: 661 KLKSEYELLWEIPNNIGYLELVAIMQKFVDQSISANTNYDPKRFLNEKIPMKQLIYDLLV 720 Query: 721 AYKFGVKTLYYQNTRDGAEDAQ--DDLVPSIQDDGCESGACKI 761 AYK G+KTLYYQNTRDGAED Q + + +I++D C SG+C I Sbjct: 721 AYKLGIKTLYYQNTRDGAEDNQNLNKSIENIKEDNCTSGSCTI 763 >UniRef50_C8WWY9 Ribonucleoside-diphosphate reductase n=15 Tax=Firmicutes RepID=C8WWY9_ALIAD Length = 772 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 226/774 (29%), Positives = 367/774 (47%), Gaps = 46/774 (5%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETI 62 + V KRDG E ++LDKI L E ++ Q DG++TS+I Sbjct: 26 KTFTVEKRDGRIEPLSLDKIFAFLKRGCEAAEGCDPERLAADVWPQLRDGMRTSEIARVA 85 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKA-----YGQFEPPALYDHVVKMVEMGKYDN 117 I+AA + S P +Q++AARL +F K+A Y Y +V++ +G+Y Sbjct: 86 IQAAVEKTSVAEPGWQFVAARLLLFDAYKQASRNRGYRHLGYGDFYQLIVELERIGRYGT 145 Query: 118 HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 ++ + Y+E+E ++ +I +RD F+Y +KQL +Y ++N G I E Q L++ V+ Sbjct: 146 YIRQHYSEDEIAELAAYIKPERDYLFNYVGLKQLLDRYAIRNLDNG-IMELPQELFMGVS 204 Query: 178 ACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI 237 L + ++ + KRFYD +ST + ++ TP +S R P Q SSC + D L SI Sbjct: 205 MHLAMKE--KDKVAWAKRFYDMLSTLQATVATPTLSNARKPFHQLSSCFIDMPEDDLVSI 262 Query: 238 NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV 297 AT A + G+GI G+IRA GS IR G +P+ ++F SC+Q G+ Sbjct: 263 YATDEAFARVSKFGGGMGIYVGKIRARGSAIRNHPGASGGVVPWIRNFNNTAVSCNQLGM 322 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R GAA ++ +WH ++ L L+ N G E + + GV I L R+ + LF Sbjct: 323 RAGAAAVYLDVWHKDILDFLQLRTNNGDERMKAHDIFPGVCIPDLFMRRVEERGMWYLFC 382 Query: 358 PSDVPGLYDAFFAD--QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQ 415 P +V + D EEFER Y ++ ++ + + A+E+ +MQ TG +I Sbjct: 383 PYEVRKVMGFSLEDSWGEEFERRYEACVENPNLPRVEIPAIEIMKRIMQSAFETGTPFIF 442 Query: 416 NVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND-----------ENGEIALCTL 464 D N +P + V SNLC EI P + + E G+ +C L Sbjct: 443 FRDTANRLNP-NKHAGMVYCSNLCTEIIQNMSPSRRIEETEEGGIITMKTEAGDFVVCNL 501 Query: 465 SAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYL 524 S+ NLG +LD + E+ +RA+D ++D YP+P A R +G+GV + YL Sbjct: 502 SSLNLGRCRDLDSIREIVRRQIRAMDNVIDLNHYPVPQAAVTNRKYRAVGLGVSGYHQYL 561 Query: 525 AKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYK 584 A+ G + + + FE I ++ ++AS ELA+E+G P F + + G Sbjct: 562 AEKGIPWESEAHVKHADELFEWINFFAIEASMELAREKGPYPLFEGSDWQTGRY------ 615 Query: 585 KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSI 644 DL P DW+ LR + HG+RN+ L A+ P+ ++S I+ +T GI+P + Sbjct: 616 FDLRGYRTRPGGPDWDGLRREVAEHGVRNAYLVAIAPTSSTSLIAGSTAGIDPVYARFFL 675 Query: 645 KASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRF 704 + K+G++ Q P+ Y ++ Q+ +DQS S N P Sbjct: 676 EEKKNGVVPQTAPNLNDKTFWYYKEAHTIDQRWSIEACAARQRHVDQSQSFNLYITPG-- 733 Query: 705 PSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 + +Q L L A+K G+KT+YY ++ S++ + C + + Sbjct: 734 ----ISARQFLDLYLLAWKRGLKTVYYVRSK------------SVEVEDCVACS 771 >UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Aquifex aeolicus RepID=RIR1_AQUAE Length = 801 Score = 798 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 243/820 (29%), Positives = 389/820 (47%), Gaps = 84/820 (10%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETII 63 + V KR G E+++++KI + +A EGL NV ++E + IQF DGI T +I + +I Sbjct: 2 TMYVIKRSGRKEKLDINKIRIAIKFACEGL-NVDPLELEADAQIQFRDGITTKEIQQLLI 60 Query: 64 KAAADLISRDAPDYQYLAARLAIFHLRKKA--------------YGQFEPPALYDHVVKM 109 K AA+ +S + PD+ Y AARL ++ L K Y + Y V + Sbjct: 61 KTAAEKVSAERPDWTYTAARLLLYDLYKDVAHLRGYSLRDDLGKYKPYNRKNFYSFVKEY 120 Query: 110 VEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESA 169 VE G Y +LLE+Y+EE+F ++ +I +RD+ F+Y +K L +YLV++ G + E Sbjct: 121 VEKGIYGEYLLENYSEEDFNKLANYIKPERDLYFTYTGIKILYDRYLVRDE-EGRVIELP 179 Query: 170 QFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE 229 Q +Y+L+A L E RL++ K+FYD +S K+++ TP + R P Q SSC ++ Sbjct: 180 QEMYMLIAMTLAVPEKPEERLKWAKKFYDVLSEHKVTVATPTLMNARRPFTQLSSCFVLT 239 Query: 230 CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAV 289 D L I G+G+ G+IRA G+PIR + +G IP K + Sbjct: 240 VDDDLFDIFDNVKKAGMISKFAGGLGVYLGKIRATGAPIRKFKGASSGVIPVVKLINDTM 299 Query: 290 KSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLK 349 Q G+R G+A++ +WH ++ L +K N G E + + V I L RL Sbjct: 300 TYVDQLGMRKGSASITLDIWHKDILDFLEVKTNVGDERKKAHDIHPAVSIPDLFMKRLKN 359 Query: 350 GEDITLFSP-----SDVPGLYDAFFAD-------------------------------QE 373 ED TL P +YD + + E Sbjct: 360 REDWTLIDPYWARQYITRKIYDGKYKEVKPLPGSHYYVGIKEDGTQDILEPKGLEDFYGE 419 Query: 374 EFERLYTKYEKD-DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP 432 EFE+ Y + E++ S K++V + EL+ ++ TG YI D N +P + Sbjct: 420 EFEKWYLELEENLPSYAKKKVNSFELWKRLLTVAFETGEPYIFFRDEANRKNP-NKHTGM 478 Query: 433 VRQSNLCLEIALPTKPLND-------------VNDENGEIALCTLSAFNLGAINNLDELE 479 V SNLC EI P E G++ +C L + NLG ++ +E++ Sbjct: 479 VYSSNLCHEIVQTMSPSKHEKPVLDPETGEITYKKEAGDLPVCNLGSVNLGKVHTEEEIK 538 Query: 480 ELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNL 539 E+ L VR LD +++ Y IP A+ R +GIGV N+ Y L K+G ++ Sbjct: 539 EVLPLLVRMLDNVIEMNFYAIPEAEYTNKRYRAIGIGVSNYHYCLVKNGIKWESEEHLKF 598 Query: 540 THKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDW 599 K FE I +Y LK S ELAKE+G F+ + ++KGIL + ++ + + W Sbjct: 599 ADKLFELIAFYALKGSLELAKERGRYKLFDGSNWSKGILFGRSVEEIEENSRQNGNNLPW 658 Query: 600 EALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY 659 L E IK +G+RN+ L ALMP+ ++S I AT I+P + + GIL QV P+ Sbjct: 659 RELAEEIKKYGIRNAYLLALMPTGSTSLILGATPSIDPIFARFYKEENMSGILPQVPPEV 718 Query: 660 EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLL 719 + + Y+ + + ++ ++ + QK+IDQ+ S N DP + +L + Sbjct: 719 DRFYWHYKTAYTI-DHEWTIRAAAVRQKWIDQAQSLNLFVDPQN-----IDGPRLSRLYE 772 Query: 720 TAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGAC 759 A++ G+KT+YY +R + + CE+ + Sbjct: 773 LAWELGLKTIYYLRSRSAMDI-----------EECEACSV 801 >UniRef50_P23921 Ribonucleoside-diphosphate reductase large subunit n=248 Tax=root RepID=RIR1_HUMAN Length = 792 Score = 776 bits (2003), Expect = 0.0, Method: Composition-based stats. Identities = 214/787 (27%), Positives = 340/787 (43%), Gaps = 81/787 (10%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHETI 62 + V KRDG ER+ DKI + GL+ V +Q+ ++ Y G+ T ++ Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE- 121 + AA L ++ PDY LAAR+A+ +L K+ F + GK+ + + Sbjct: 61 AETAATLTTK-HPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKS 119 Query: 122 --DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 D ++++ I +DRD +++Y K LE YL++ + G++ E Q + + V+ Sbjct: 120 TLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLK--INGKVAERPQHMLMRVSVG 177 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSIN 238 + + + Y+ +S + +P + T Q SSC L+ DS++ I Sbjct: 178 IH-----KEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIY 232 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-V 297 T GIG+ IRA GS I G G +P + + + QGG Sbjct: 233 DTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNK 292 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R GA ++ WHL++ L LK N G E R R + + + I L R+ +D +L Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352 Query: 358 PSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417 P++ PGL + + EEFE+LY YEK +RK VKA +L+ +++ + TG Y+ Sbjct: 353 PNECPGLDEVW---GEEFEKLYASYEKQGRVRKV-VKAQQLWYAIIESQTETGTPYMLYK 408 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----- 472 D CN S + ++ SNLC EI T E+A+C L++ L Sbjct: 409 DSCNRKSN-QQNLGTIKCSNLCTEIVEYTS--------KDEVAVCNLASLALNMYVTSEH 459 Query: 473 -NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRY 531 + +L E+ + VR L+ ++D YP+P A R +GIGV A + Sbjct: 460 TYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPF 519 Query: 532 SDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA 591 A L + FE I Y L+AS +LAKEQG + + +KGIL D + + Sbjct: 520 ESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDL- 578 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI 651 +DW+ L+E I +G+RNS L A MP+ +++QI IEP + + G Sbjct: 579 -----WDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGE 633 Query: 652 LRQVVP--------------------------------DYEHLHDAYELLWEMPGNDGYL 679 + V P + L Y+ +WE+ L Sbjct: 634 FQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEI-SQKTVL 692 Query: 680 QLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGA 738 ++ FIDQS S N + + +L +K G+KT +YY TR A Sbjct: 693 KMAAERGAFIDQSQSLNIHIAEPNY-------GKLTSMHFYGWKQGLKTGMYYLRTRPAA 745 Query: 739 EDAQDDL 745 Q L Sbjct: 746 NPIQFTL 752 >UniRef50_A8P6Y3 Ribonucleoside-diphosphate reductase n=1 Tax=Brugia malayi RepID=A8P6Y3_BRUMA Length = 1061 Score = 772 bits (1993), Expect = 0.0, Method: Composition-based stats. Identities = 216/802 (26%), Positives = 345/802 (43%), Gaps = 90/802 (11%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVEL--RSHIQFYDGIKTSDIH 59 N V KRDG E ++ DKI R + GL + +E+ + Y G+ T ++ Sbjct: 8 TSNSYVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELD 67 Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHL 119 + AAD+I++ PDY LA+R+ + +L KK F + + + G++ + Sbjct: 68 NLAAEIAADMITK-HPDYATLASRITVSNLHKKTEKSFSKLSRRLYNATHPKSGRHMPLI 126 Query: 120 LE---DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV 176 + D + +D+ I H+RD ++Y +K LE YL+Q + GE+ E Q + + V Sbjct: 127 SKELFDIIQNNANLLDSAIVHERDYLYTYFGLKTLERSYLLQ--INGELAERPQHMLMRV 184 Query: 177 AACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLD 235 A + ++ Y+ +S + TP + T T Q SSC L+ DS++ Sbjct: 185 ALGIHG-----EDIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFEDSIE 239 Query: 236 SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQG 295 I T GIG+N IRA GS I G G +P + F A + QG Sbjct: 240 GIFETLKKCALISKSAGGIGLNVHCIRASGSAIAGTNGVSNGLVPMLRVFNNAARYVDQG 299 Query: 296 G-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDIT 354 G R GA ++ WH ++ L L+ N G E R R + +G+ + L R+ + + Sbjct: 300 GNKRPGAFAVYLEPWHADIFDFLELRKNVGDELERCRDLFFGLWVPDLFMERVRDDKIWS 359 Query: 355 LFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYI 414 L P++ PGL D++ E FE+LYT+YE++ RKQ V A +L+ ++ + TG Y+ Sbjct: 360 LMCPAECPGLEDSW---GEAFEKLYTQYEEEGRYRKQ-VPARKLWETIVFTQIETGMPYM 415 Query: 415 QNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-- 472 D CN + + ++ SNLC E+ L + EIA+C L++ LG Sbjct: 416 VYKDTCNRKTN-QQNLGTIKCSNLCTEVVLYSS--------REEIAVCNLASIALGRFVT 466 Query: 473 ----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHG 528 + L E+ + V+ L+ ++D YPIP A+R R +GIGV A Sbjct: 467 SEMKYDFKMLHEVTKVVVKNLNKVIDRNYYPIPEAERSNKRHRPIGIGVQGLADAFILMR 526 Query: 529 KRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLD 588 ++ A +L + FE I Y L+AS +LAKEQG + + +KGIL D + Sbjct: 527 YPFTSEKARDLNKRIFETIYYAALEASCDLAKEQGPYESYEGSPISKGILQFDMWGVTP- 585 Query: 589 TIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 DW LRE I G+RNS L + MP+ +++QI IEP V + Sbjct: 586 -----TDQCDWGTLREKIAKFGIRNSVLLSPMPTASTAQILGNNESIEPYTSNVYTRNVL 640 Query: 649 DGIL--------------------------------RQVVPDYEHLHDAYELLWEMPGND 676 G + + + + D Y +WEM D Sbjct: 641 SGSFQIFNMHLMNDLMHLDLWDDDMKLEIIKNKGSIQNIERIPQEIRDLYRTVWEMSQRD 700 Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYK---------FGVK 727 + + FIDQS S N + + + ++ G+K Sbjct: 701 -IIDMAADRGAFIDQSQSLNIFIARPNYGN-------ITSMHFYGWQKVCTAFLMYKGLK 752 Query: 728 T-LYYQNTRDGAEDAQDDLVPS 748 T +YY TR + Q + + Sbjct: 753 TGMYYLRTRPAVDAVQFTVDKT 774 >UniRef50_P48591 Ribonucleoside-diphosphate reductase large subunit n=94 Tax=root RepID=RIR1_DROME Length = 812 Score = 770 bits (1989), Expect = 0.0, Method: Composition-based stats. Identities = 213/790 (26%), Positives = 341/790 (43%), Gaps = 81/790 (10%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHI--QFYDGIKTSDIH 59 L V KRDG E ++ DKI + L+ + V + + Y G+ T ++ Sbjct: 9 TSKLYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELD 68 Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEP--PALYDHVVKMVEMGK-YD 116 + AA L + PDY LAAR+A+ +L K+ F LY+HV K Sbjct: 69 NLAAEIAAGLTC-NHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLV 127 Query: 117 NHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV 176 + + ++ ++++ I +DRD ++Y K LE YL++ G+I E Q + + V Sbjct: 128 SEFHYNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKR--NGKIAERPQHMLMRV 185 Query: 177 AACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLD 235 A + + Y+ +S + +P + T Q SSC L+ DS++ Sbjct: 186 AIGIHG-----EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIE 240 Query: 236 SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQG 295 I + GIG+N IRA G+ I G G +P + F + QG Sbjct: 241 GIFKSVEQCAMISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQG 300 Query: 296 G-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDIT 354 G R GA ++ WH +V L LK N G E NR R + Y + I L R+ D + Sbjct: 301 GGKRPGAFAIYLEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWS 360 Query: 355 LFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYI 414 L P PGL+D + +EFE+LY KYE++ + VKA L+ +++ + TG Y+ Sbjct: 361 LMCPHKCPGLHDVW---GDEFEKLYEKYEQEGRAN-RTVKAQSLWFAIIEAQVETGNPYM 416 Query: 415 QNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-- 472 D CN S + ++ SNLC EI + P EIA+C L++ L Sbjct: 417 LFKDACNRKSN-QQNVGTIKCSNLCTEIVEYSAP--------DEIAVCNLASIALNMFVT 467 Query: 473 ----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHG 528 + +L+E+ + + L+ ++D YP+P A++ + R +GIG+ FA L Sbjct: 468 PEKTYDFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMR 527 Query: 529 KRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLD 588 Y A L + FE I Y L+AS ELA+ +G + + +KGIL D + K Sbjct: 528 FPYESEEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPT 587 Query: 589 TIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 + +DW+ L+ESI+ HG+RNS L A MP+ +++QI EP + + Sbjct: 588 NL------WDWQKLKESIRMHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVL 641 Query: 649 DGILRQVVP--------------------------------DYEHLHDAYELLWEMPGND 676 G + V + D Y+ +WE+ Sbjct: 642 SGEFQVVNHHLLRDLTELDLWDDDMKNQIISSRGSIQNIETIPPKVRDLYKTVWEI-SVK 700 Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTR 735 +++ FIDQS S N + + +L ++K G+KT +YY T+ Sbjct: 701 STIKMAADRGAFIDQSQSFNIHVAEPNY-------GKLTSIHFYSWKAGLKTGMYYLRTK 753 Query: 736 DGAEDAQDDL 745 A Q + Sbjct: 754 PAANAIQFTV 763 >UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URA6_9AQUI Length = 767 Score = 768 bits (1983), Expect = 0.0, Method: Composition-based stats. Identities = 223/792 (28%), Positives = 370/792 (46%), Gaps = 62/792 (7%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + V KR G E+++++KI L++A +GL NV ++E + IQF DGI T +I +I+ Sbjct: 1 MEVVKRSGKREQLDINKIRIALEFAFKGL-NVDPLELETDAQIQFRDGITTEEIQAVLIR 59 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKA---------------YGQFEPPALYDHVVKM 109 AA+ +S + PD+Q+ AARL ++ L KK Y + Y+ + + Sbjct: 60 TAAEKVSPETPDWQFAAARLLLYDLYKKVAHIRGYEVRDELSKDYKPYNTEGFYEFINRF 119 Query: 110 VEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESA 169 V G Y ++LL+ Y+E + + + I +RD+ F+Y +K L +YL ++ G I E Sbjct: 120 VGEGIYGDYLLKHYSESDIRDLAKHIKPERDLYFNYTGIKILTDRYLARDE-DGRIIELP 178 Query: 170 QFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE 229 Q +Y+L++ L R+++ K FYD +S I++ TP + R P Q SSC ++ Sbjct: 179 QEMYMLISMTLAIPEKEGDRVKWAKEFYDLLSEHLITVATPTLMNARRPFTQLSSCFILT 238 Query: 230 CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAV 289 D L I + G+GI G++RA G+PIR + +G IP K + Sbjct: 239 VDDDLYDIFDNVQKAAQISKHAGGLGIYIGKLRATGAPIRKFKGASSGIIPVVKVINDVM 298 Query: 290 KSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLK 349 Q G+R G+A++ +WH ++ L +K N G E + + + I L R+ Sbjct: 299 TYVDQLGMRKGSASITLDIWHKDILDFLEVKTNAGDERKKAHDIHPAISIPDLFMKRVKN 358 Query: 350 GEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKD---------DSIRKQRVKAVELFS 400 E TL P Y D + E L+ + ++ K+ V A EL+ Sbjct: 359 REKWTLLDPY-----YTKNVRDGKNLEDLWGEAFEEEYERLEKELPEDAKKEVDAFELWK 413 Query: 401 LMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDE----- 455 ++ TG Y+ DH N +P + V SNLC EI P + E Sbjct: 414 RLLTVAFETGEPYLFFRDHANRINP-NKHAGMVYSSNLCHEIVQNMSPTKHLGKELDPET 472 Query: 456 --------NGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGA 507 +G++ +C L + NLG + + +E++ VR LD +++ Y IP A+ Sbjct: 473 GEIVHRKKSGDVVVCNLGSVNLGKVYTKETMEQVVPKLVRLLDNVIEMNYYAIPEAEYTN 532 Query: 508 MGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW 567 R +GIGV N+ Y L K+G + K FE + +Y +K S ELAKE+G Sbjct: 533 KRYRAIGIGVSNYHYCLVKNGVNWESEDHLKFADKLFELLGFYAIKGSMELAKERGKYRL 592 Query: 568 FNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQ 627 F + +++GI ++ + W+ L E ++ +G+RNS L ALMP+ ++S Sbjct: 593 FEGSDWSRGIFFGRKAEELEENSKENGNDLPWKDLAEDVRENGIRNSYLLALMPTGSTSL 652 Query: 628 ISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQK 687 I AT ++P + + GIL QV P+ + Y+ + + + ++ + QK Sbjct: 653 ILGATPSVDPIFAKYYKEENMSGILPQVPPEIDRFFWHYKSAYNI-DQEWVVRAAAVRQK 711 Query: 688 FIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVP 747 +IDQ+ S N DP K+ L K A++ G+KT+YY ++ + Sbjct: 712 WIDQAQSLNLFIDPE-----KIDGPTLSKIYQLAWELGLKTIYYLRSKSITDI------- 759 Query: 748 SIQDDGCESGAC 759 + CES A Sbjct: 760 ----EECESCAV 767 >UniRef50_C1FEX6 Ribonucleoside-diphosphate reductase n=4 Tax=Chlorophyta RepID=C1FEX6_9CHLO Length = 841 Score = 761 bits (1964), Expect = 0.0, Method: Composition-based stats. Identities = 224/811 (27%), Positives = 337/811 (41%), Gaps = 100/811 (12%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHETI 62 + V KRDG E ++ DKI ++ A GL+ V + + Y G+ TS++ E Sbjct: 3 MYVVKRDGRQEPVHFDKITARINKLAYGLNQEFCDPVLVAQKVAVGVYKGVTTSELDELA 62 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLED 122 + AA + S+ PDY LAAR+A+ +L K F + GK+ L +D Sbjct: 63 AETAASMTSK-HPDYAQLAARIAVSNLHKNTLKSFSETMKVMYEHVNKRNGKWSPLLADD 121 Query: 123 YTE---EEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 E E + D+ I +DRD + Y K LE YL+ RV G+I E Q L + VA Sbjct: 122 VYEIIKENADRFDSEIVYDRDFDYDYFGYKTLERSYLL--RVDGKIVERPQHLLMRVAIG 179 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSIN 238 + ++ Y +S ++ +P + TP Q SSC LI DS++ I Sbjct: 180 IHK------DVEKAIDTYHMLSERWMTHASPTLFNSGTPRPQLSSCFLIAMKEDSIEGIY 233 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-V 297 T GIG++ IRA S IRG G IP + F + QGG Sbjct: 234 DTLKECACISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGK 293 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R GA ++ WH ++ L L+ N G E R R + YG+ N L R+ + TLF Sbjct: 294 RKGAFAIYLEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMKRVEANGEWTLFC 353 Query: 358 PSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417 P++ PGL D + EEFE LY KYE + K+ VKA +L+ +++ + TG Y+ Sbjct: 354 PNEAPGLADCW---GEEFEALYEKYEAEGK-GKKTVKAQQLWFAILESQVETGNPYMLFK 409 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL-------- 469 D CN S + +R SNLC EI T P E A+C L++ L Sbjct: 410 DACNRKSN-QQNLGTIRSSNLCTEIVEYTSP--------EETAVCNLASIALPRFVIENN 460 Query: 470 --------------------GAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMG 509 + D+L E+ R L+ ++D YP+ A+R M Sbjct: 461 PQSPTGRTEAKKLRGSIGAANRYFDHDKLAEITRKVTRNLNRIIDVNYYPVETARRSNMK 520 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 R +G+GV A G + A L + FE I + L SN++AK G + Sbjct: 521 HRPIGLGVQGLADVFILLGMPFDSPEAKKLNAEIFETIYFAALTESNDIAKRDGTYESYP 580 Query: 570 ETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS 629 + + G+L D + +DW LR I HG+RNS L A MP+ ++SQI Sbjct: 581 GSPVSNGVLQPDMWGLTE---MPGGDRHDWTGLRTKISEHGVRNSLLVAPMPTASTSQIL 637 Query: 630 NATNGIEPPRGYVSIKASKDGILRQVVP-------------------------------D 658 EP + + G V Sbjct: 638 GNNECFEPYTSNIYARRVLSGEFTVVNQHLLSDLTEMGLWDPSLKNELIANNGSVQSLDI 697 Query: 659 YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDL 718 ++L + Y+ +WE+ + + FIDQS S N + + +L Sbjct: 698 PDNLKEIYKTVWEIK-QRILVDMAADRGAFIDQSQSFNVHMSDAN-------SGKLTSLH 749 Query: 719 LTAYKFGVKT-LYYQNTRDGAEDAQDDLVPS 748 A+K G+KT +YY +R A+ + + P+ Sbjct: 750 FYAWKKGLKTGMYYLRSRAAADAVKFTVDPN 780 >UniRef50_C5LWW8 Ribonucleoside-diphosphate reductase n=4 Tax=Eukaryota RepID=C5LWW8_9ALVE Length = 1504 Score = 757 bits (1954), Expect = 0.0, Method: Composition-based stats. Identities = 216/791 (27%), Positives = 336/791 (42%), Gaps = 78/791 (9%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHETI 62 + V KR+G + DKI + + GL+ V ++Q+ + Y G+ T+++ Sbjct: 3 MYVIKRNGQKADVQFDKITKRIRPLTRGLNEDYVDVTQITQKVAEGIYPGVTTTELDSLA 62 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPP--ALYDHVVKMVEMGKYDNHLL 120 + A + S+ PD+ LAAR+A+ +L K + F LY+ + + Sbjct: 63 AETCAYM-SQVHPDFSTLAARIAVSNLHKNTHESFSETITELYNITDSRGRSSPLVSEEV 121 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 + + ++D ID+DRD + Y K LE YL++ E Q + + VA + Sbjct: 122 YNIVKMNADKLDKAIDYDRDFDYDYFGFKTLERSYLLKRPSDKTCIERPQHMIMRVAVGI 181 Query: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSINA 239 + + Y +ST + TP + TP Q SSC L+ DS++ I Sbjct: 182 HGD-----DVDAAIETYALMSTRVFTHATPTLFNSGTPHPQMSSCFLLSIKEDSIEGIYD 236 Query: 240 TSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VR 298 T GIG+ IRA S IRG F G +P + F + QGG R Sbjct: 237 TLKQCAMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFNDTARYVDQGGGKR 296 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 G+ ++ WH +V L LK N G E +R R + Y + I L R++ D TLF P Sbjct: 297 KGSFAVYLEPWHADVFEFLDLKKNHGKEEHRARDLFYALWIPDLFMKRVMANGDWTLFCP 356 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 ++ PGL D + EEFE LY KYEKD I ++ VKA L+ +++ + TG Y+ D Sbjct: 357 NEAPGLQDTY---GEEFEALYEKYEKDG-IGRKTVKAQSLWFKILESQQETGIPYMLYKD 412 Query: 419 HCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------ 472 N S + +R SNLC EI T + E+A+C L++ L Sbjct: 413 SANRKSN-QKNLGTIRCSNLCCEIIEYTS--------SDEVAVCNLASIALNMFVDKKTR 463 Query: 473 -NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRY 531 + D L +A + + L+ ++D YP+P A++ M R +GIGV A Y Sbjct: 464 TYDFDRLHRVAKVVTKNLNKVIDRNYYPVPEARKSNMRHRPIGIGVQGLADAFLLMRYPY 523 Query: 532 SDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA 591 A L + FE I + +AS ELAK G F + ++GIL D + D+ Sbjct: 524 ESPEALKLNNDIFETIYHAACEASMELAKRDGPYETFQGSPASEGILQFDMWDVIPDS-- 581 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS---- 647 +DW +L+E IK +G+RNS L A MP+ +++QI EP + ++ Sbjct: 582 ---GRWDWASLKEEIKKNGMRNSLLIAPMPTASTAQILGNNEAFEPYTQNIYVRRVLAGE 638 Query: 648 ----------------------------KDGILRQVVPDYEHLHDAYELLWEMPGNDGYL 679 K G ++ V + D Y+ +WE+ L Sbjct: 639 FVQVNRHLVDDLMELGLWNDEIKDKIIRKKGSVQGVEEIPSEIQDLYKTVWEIK-QKKIL 697 Query: 680 QLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL-YYQNTRDGA 738 + +IDQS S N + +L +K G+KT YY T+ A Sbjct: 698 DMAAGRGPYIDQSQSLNIHM-------TNCTNAKLSSMHFYGWKLGLKTGQYYLRTKAAA 750 Query: 739 EDAQDDLVPSI 749 + Q L Sbjct: 751 DAIQFTLDAKK 761 >UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alpha n=54 Tax=Epsilonproteobacteria RepID=RIR1_HELPJ Length = 788 Score = 752 bits (1942), Expect = 0.0, Method: Composition-based stats. Identities = 207/804 (25%), Positives = 362/804 (45%), Gaps = 70/804 (8%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + V KR+G E +++ KI + A + L VS S++E+ + +QF D I T +I +T+IK Sbjct: 2 ITVVKRNGRIEPLDITKIQKYTKDATDNLEGVSQSELEVDARLQFRDKITTEEIQQTLIK 61 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYT 124 A D I D P++ ++A+RL ++ L K G Y H+ + E + +L+ + Sbjct: 62 TAVDKIDIDTPNWSFVASRLFLYDLYHKVSG----FTGYRHLKEYFENAEEKGRILKGFK 117 Query: 125 EE-EFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN 183 E+ + + +++ I +RD F+Y +K L +YL+++ E Q +++ +A L N Sbjct: 118 EKFDLEFLNSQIKPERDFQFNYLGIKTLYDRYLLKD-ANNHPIELPQHMFMSIAMFLAQN 176 Query: 184 YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSA 243 ++ FY+ +S F+ TP ++ RT Q SSC + D+++ I + Sbjct: 177 EQELNKI--ALEFYEVLSKFEAMCATPTLANARTTKHQLSSCYIGSTPDNIEGIFDSYKE 234 Query: 244 IVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAAT 303 + GIG + +R++GS I G + G IPF K + Q G R GA Sbjct: 235 MALLSKYGGGIGWDFSLVRSIGSYIDGHKNASAGTIPFLKIANDVAIAVDQLGTRKGAIA 294 Query: 304 LFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPG 363 ++ +WH++V + L+ N G E R + + + L R+L+ TLF P + Sbjct: 295 VYLEIWHIDVMEFIDLRKNSGDERRRAHDLFPALWVCDLFMKRVLEDAMWTLFDPYECKD 354 Query: 364 LYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTH 423 L + + D FE+ Y +YEKD I K+ + A +L+ ++ G ++ D+ N Sbjct: 355 LTELYGQD---FEKRYLEYEKDPKIIKEYINAKDLWKKILMNYFEAGLPFLAFKDNANRC 411 Query: 424 SPFDPAIAPVRQSNLCLEIALPTKPLNDV------------------------------- 452 +P + +R SNLC EI T P + Sbjct: 412 NP-NAHAGIIRSSNLCTEIFQNTAPNHYYMQIEYTDGAIEFFEEKELVTTDSNITKCANK 470 Query: 453 -----------------NDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDY 495 ++G+ A+C L++ NL IN ++++ + + VR LD ++D Sbjct: 471 LTSTDILKGKKIYIATKVAKDGQTAVCNLASINLSKINTEEDIKRVVPIMVRLLDNVIDL 530 Query: 496 QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKAS 555 YP K + R +G+GV+ A LA+H + E I Y+ + S Sbjct: 531 NFYPNRKVKATNLQNRAIGLGVMGEAQMLAEHQIAWGSKEHLEKIDALMEQISYHAIDTS 590 Query: 556 NELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPL---HYDWEALRESIKTHGLR 612 LAKE+G F + ++KGI PID + + + L DW+ LRE +K +G+R Sbjct: 591 ANLAKEKGVYKDFENSEWSKGIFPIDKANNEALKLTEKGLFNHACDWQGLREKVKANGMR 650 Query: 613 NSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE-HLHDAYELLWE 671 N L A+ P+ + S + T IEP + + G++ VVP+ + Y ++ Sbjct: 651 NGYLMAIAPTSSISILVGTTQTIEPIYKKKWFEENLSGLIPVVVPNLNVETWNFYTSAYD 710 Query: 672 MPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYY 731 + D ++ + QK+IDQ S N + L + A+K G+K+ YY Sbjct: 711 IDAKD-LIKAAAVRQKWIDQGQSINVFLRIEN-----ASGKTLHEIYTLAWKLGLKSTYY 764 Query: 732 QNTRDGAEDAQDDLVPSIQDDGCE 755 + + D + L S++ C+ Sbjct: 765 LRSESPSIDEKSVLDRSVECFNCQ 788 >UniRef50_D1CID8 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=D1CID8_THET1 Length = 819 Score = 741 bits (1912), Expect = 0.0, Method: Composition-based stats. Identities = 202/795 (25%), Positives = 329/795 (41%), Gaps = 70/795 (8%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHET 61 Q + V +G ++ D++ R L A GL ++ YD + I Sbjct: 10 TQRVRVVSPEGGLVPLDPDRVRRHLQHACRGLPECDPDELANEVVRSLYDRVTPEQIRSA 69 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYG-----QFEPPALYDHVVKMVEMGKYD 116 +I AA I RD P Y +A+RL + + ++++G + + V Sbjct: 70 MILAARARIERD-PAYDKVASRLMLEQIYQESWGWVPSEAELAATYREMFPRYVHACISA 128 Query: 117 NHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV 176 L E+ + ++ + + +RD Y ++ L +YL+ V G E+ Q+ ++ V Sbjct: 129 GRLSEELARFDLARLASALRPERDEKLRYIGLQTLYDRYLL--DVEGRRLEAPQYFWMRV 186 Query: 177 AACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDS 236 A L +FYD +S+ + TP + TP Q SSC L D L+ Sbjct: 187 AMGLALREDDPNAR--AAQFYDLLSSLRFVSATPTLFNSGTPHPQLSSCYLSTVEDDLEH 244 Query: 237 INATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG 296 I K G+G + R+RA G+ IRG G IPF K + +QGG Sbjct: 245 IFKVIGDNAKLSKWAGGLGNDWTRVRATGALIRGTHGKSQGVIPFLKIVNDTAVAVNQGG 304 Query: 297 VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLF 356 R GA + WHL+ E L L+ N G E R M + L R+ +G TLF Sbjct: 305 KRKGAVCCYLEPWHLDFEEFLELRKNTGDERRRTHDMHTASWVPDLFMRRVQEGGTWTLF 364 Query: 357 SPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK-QRVKAVELFSLMMQERASTGRIYIQ 415 SP++VP L++ + E Y + ++ +R+ +RV A L+ M+ TG +I Sbjct: 365 SPNEVPDLHELYGRAFERRYVEYERMAEEGKLRQHKRVDAKMLWRKMLSMLWETGHPWIA 424 Query: 416 NVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL-----G 470 D N S D + + SNLC EI LPT E A+C L + NL G Sbjct: 425 FKDPSNIRSAQD-HVGVIHSSNLCTEILLPTS--------REETAVCNLGSINLVEHLSG 475 Query: 471 AINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530 + +L E AVR LD ++D YP P A+R + R +G+G++ F L Sbjct: 476 DGLDEAKLAETVRTAVRMLDNVIDINFYPTPEARRSNLRHRPIGLGIMGFHDALLALRIP 535 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTY-----KK 585 Y+ A + +T E I ++ + AS+ELA E+G P + + +++G+LPIDT ++ Sbjct: 536 YASPQAVEFSDQTMELISWHAIMASSELAAERGRYPSYQGSKWSRGLLPIDTIELLERER 595 Query: 586 DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIK 645 D + DW +RE++ G+RNS + A+ P+ T S I+ + IEP + +K Sbjct: 596 GGDLEMDRTARLDWGPVREAVARWGVRNSQIMAIAPTATISNIAGVSQSIEPHYRNLFVK 655 Query: 646 ASKDGILRQVVPD--------------------------------YEHLHDAYELLWEMP 673 ++ G V P + + Y E+ Sbjct: 656 SNLSGDFTIVNPYLVEDLKRLGLWSQEMLDRIKYYDGSILPIEEIPDEVKHLYLTAHEI- 714 Query: 674 GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQN 733 ++ QK++D S N ++L + A++ G+KT YY Sbjct: 715 DPLWLIECASRRQKWVDMGQSLNIYVAEP-------SGKKLHEIYFAAWRKGLKTTYYLR 767 Query: 734 TRDGAEDAQDDLVPS 748 + + + Sbjct: 768 AVGATNVEKASMDIN 782 >UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=cellular organisms RepID=B4E5V9_BURCJ Length = 1003 Score = 726 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 214/782 (27%), Positives = 339/782 (43%), Gaps = 76/782 (9%) Query: 11 DGSTERINLDKIHRVLDWAAEGLHN-VSISQVELRSHIQFYDGIKTSDIHETIIKAAADL 69 +G T ++L+ + ++ A +GL V+ + + YDG+ S ++++ I AA + Sbjct: 163 NGVTRPLDLNALRALIVSACDGLGAAVNPDPIVAETVKNLYDGVPMSQVYDSAILAARTM 222 Query: 70 ISRDAPDYQYLAARLAIFHLRKKAYG----QFEPPALY-DHVVKMVEMGKYDNHLLEDYT 124 I +D P Y + AR+ + +R++ G Q E Y ++ + ++ G L + Sbjct: 223 IEKD-PAYSQVTARILLHTIRREILGEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLL 281 Query: 125 EEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY 184 + + K++ +D +RD+ F Y ++ L +Y + V G E Q ++ VA L N Sbjct: 282 QFDLKRLGEALDANRDLQFGYLGLQTLYDRYFLH--VDGTRIEMPQAFFMRVAMGLSLNE 339 Query: 185 PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAI 244 R FY+ +S+F TP + T Q SSC L D LD I Sbjct: 340 --IDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADDLDGIYEALKEN 397 Query: 245 VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL 304 G+G + R+RALGS I+G G +PF K + +QGG R GA Sbjct: 398 ALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCA 457 Query: 305 FYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGL 364 + WHL++E L L+ N G + R M+ I L R+++G D TLFSPS P L Sbjct: 458 YLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDL 517 Query: 365 YDAFFADQEEFERLYTKYEKDDSIRK-QRVKAVELFSLMMQERASTGRIYIQNVDHCNTH 423 +D F AD E+ Y I+ +++ A +L+ M+ TG +I D CN Sbjct: 518 HDKFGADFEKAYTAYEDKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVR 577 Query: 424 SPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGA----------IN 473 SP + V SNLC EI L T EIA+C L + NL A Sbjct: 578 SP-QQHVGVVHSSNLCTEITLNTSDT--------EIAVCNLGSVNLVAHLVKQADGSYAL 628 Query: 474 NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSD 533 + D+L+ +A+R LD ++D Y +P A+ + R +G+G++ F L Y+ Sbjct: 629 DHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYAS 688 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA-- 591 +A ++ EA+ YY AS ELA+E+G + + + +GILP DT K + Sbjct: 689 EAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGY 748 Query: 592 ---NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 + DW LR I HG+RNS A+ P+ T S I + IEP + +K++ Sbjct: 749 VEVDTSESLDWTTLRSRIAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNL 808 Query: 649 --------------------------------DGILRQVVPDYEHLHDAYELLWEMPGND 676 DG+L ++ L Y +E+ Sbjct: 809 SGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEV-DPT 867 Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRD 736 ++ QK+IDQ+ S N G ++L + A+ G+KT YY T Sbjct: 868 WLVEAASRRQKWIDQAQSLNIYM-------GGASGKKLDEVYKLAWLRGLKTTYYLRTMA 920 Query: 737 GA 738 Sbjct: 921 AT 922 >UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E2 Length = 790 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 219/780 (28%), Positives = 345/780 (44%), Gaps = 54/780 (6%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + VTKR+G+TE + KI + ++WA +G +V +V ++ + YDGIKTSDI + +IK Sbjct: 1 MNVTKRNGATEPFSPSKIEKAVNWAVDG-TSVESQEVIDKAILLIYDGIKTSDIQQALIK 59 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPA----LYDHVVKMVEMGKYDNHLL 120 AA L+S D ++ARL + L K G + Y H+ +E G L Sbjct: 60 GAAKLVSATKADASLVSARLLLLDLYKTVCGVNGKVSGGGFQYPHIKDYLEKGVSLKLLD 119 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQ-----------NRVTGEIYESA 169 + + ++++ I +RD++F Y + L +Y ++ ++G I E Sbjct: 120 PELLNYDLERINAAIKPERDLSFHYLGLDTLADRYFIRANRDIRLEKETGNMSGNIIELP 179 Query: 170 QFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE 229 Q ++ VA + E R +Y+ S + TP + T Q SSC L + Sbjct: 180 QHFWMRVAMGVALKEKPEIRTSVALAYYELYSKLEYVSSTPTLFNAGTLHPQLSSCYLNQ 239 Query: 230 CGDSLD---------SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIP 280 D++ SI GIG + +R I G +G +P Sbjct: 240 VSDTIAADEGDNRFASIFGAIEETALLSKFAGGIGTDWTPVRGENELIFGTNGISSGVVP 299 Query: 281 FYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQIN 340 + K + +QGG R G+ + WH + + LK G + R + + Sbjct: 300 YIKVQNNTAVAVNQGGKRKGSVAPYLEAWHPDFMAFCELKRESGDDRRRAHDVFPAAWVP 359 Query: 341 KLMYTRLLK-GEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELF 399 L+ R + FSP P L++ + E+F + Y + E Q + A++++ Sbjct: 360 DLLIERKEDPNAMWSFFSPKRFPELHELY---GEDFVKRYEELEAAGEYDFQ-LPAIQVW 415 Query: 400 SLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEI 459 ++ TG +I D CN +P + SNLC EI L T E Sbjct: 416 RHLLTNLFETGHPWITYKDECNRRNP-QQHAGVIHHSNLCTEITLNTS--------KDET 466 Query: 460 ALCTLSAFNLGAI----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGI 515 A+C L + NL + N L+ L E+ LA+R LD+++D YP A R +G+ Sbjct: 467 AVCNLGSINLSQVMSAPNPLERLREVIRLAIRNLDSVIDVNYYPSDRASNSNFKHRPIGL 526 Query: 516 GVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAK 575 GV+ + +L K G + FEAI Y+ ++AS +LA+E+G+ P F + ++K Sbjct: 527 GVMGYYEWLVKQGVDFESEEHLKQADALFEAISYFAIEASADLAQERGSYPSFEGSNWSK 586 Query: 576 GILPIDTYKKDLDTIA--NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATN 633 GILPID K D ++P +DWEALRE +K G+RNS + A+ P+ T S I+ T Sbjct: 587 GILPIDNAKLMEDGKPFFDQPRRFDWEALREKVKK-GMRNSNVMAIAPTATISNIAGTTQ 645 Query: 634 GIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDG--YLQLVGIMQKFIDQ 691 EPP K++ G + V P H+ D Y LL E D ++ + QK+IDQ Sbjct: 646 CTEPPFLLEYFKSNLGGTYQVVDPAIAHVGDKYHLLKESYYVDQLYIIKAAAVRQKWIDQ 705 Query: 692 SISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQD 751 S S N F + L TA K G+KT YY + AE + I + Sbjct: 706 SQSTNL------FAKQGTTGRDLDLWYTTAKKLGLKTTYYLRNQSDAEKSASMRTKVIAE 759 >UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=cellular organisms RepID=B2SYU1_BURPP Length = 1001 Score = 722 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 207/782 (26%), Positives = 335/782 (42%), Gaps = 76/782 (9%) Query: 11 DGSTERINLDKIHRVLDWAAEGLHN-VSISQVELRSHIQFYDGIKTSDIHETIIKAAADL 69 +G T +++ + +++ A L + VS + + YDG+ S ++++ I AA + Sbjct: 156 NGVTRPLDMAALRGIIELACSNLGDAVSADPIIAETVKNLYDGVPMSQVYDSAILAARTM 215 Query: 70 ISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALY-----DHVVKMVEMGKYDNHLLEDYT 124 I +D P Y + AR+ + +R++ + ++ + ++ G L + Sbjct: 216 IEKD-PAYSQVTARILLHTIRREILKEEVTQTEMGERYAEYFPQFIKRGVQAELLDDKLL 274 Query: 125 EEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY 184 + + K++ +D++RD+ F Y ++ L +Y + + G E Q ++ VA L N Sbjct: 275 QFDLKRLGAALDNNRDLQFGYLGLQTLYDRYFLHH--DGVRIEMPQAFFMRVAMGLSLNE 332 Query: 185 PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAI 244 R FY+ +S+F TP + T Q SSC L D LD I Sbjct: 333 --IDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVDDDLDGIYEALKEN 390 Query: 245 VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL 304 G+G + R+RALGS I+G G +PF K + +QGG R GA Sbjct: 391 ALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCA 450 Query: 305 FYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGL 364 + WHL++E L L+ N G + R M+ I L R+++G D TLFSPS P L Sbjct: 451 YLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDL 510 Query: 365 YDAFFADQEEFERLYTKYEKDDSIRK-QRVKAVELFSLMMQERASTGRIYIQNVDHCNTH 423 +D F AD E+ Y I+ +++ A +L+ M+ TG +I D CN Sbjct: 511 HDLFGADFEKAYTAYEDKVARGEIKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVR 570 Query: 424 SPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGA----------IN 473 SP + V SNLC EI L T + EIA+C L + NL A + Sbjct: 571 SP-QQHVGVVHSSNLCTEITLNTS--------DAEIAVCNLGSVNLVAHLKEQADGTLVL 621 Query: 474 NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSD 533 + D+L+ +A+R LD ++D Y + A+ + R +G+G++ F L Y+ Sbjct: 622 DHDKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYAS 681 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA-- 591 A + EA+ YY AS ELA+E+G + + + +GILP D+ K D Sbjct: 682 EEAVKFADTSMEAVCYYAYYASTELAQERGRYSSYRGSLWDRGILPQDSVKLLADARGGY 741 Query: 592 ---NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 + DW LR I T+G+RNS A+ P+ T S I + IEP + +K++ Sbjct: 742 VEVDSSESMDWTELRSRIATYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNL 801 Query: 649 --------------------------------DGILRQVVPDYEHLHDAYELLWEMPGND 676 DG L ++ L Y +E+ Sbjct: 802 SGEFTVVNDYLVRDLKARGLWDEVMVADLKYFDGTLSRIDRIPADLRAIYATAFEV-DPK 860 Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRD 736 ++ QK+IDQ+ S N G ++L + A+ G+KT YY T Sbjct: 861 WLVEAASRRQKWIDQAQSLNIYM-------GGASGKKLDEIYKLAWVRGLKTTYYLRTMA 913 Query: 737 GA 738 Sbjct: 914 AT 915 >UniRef50_D1BPH5 Ribonucleoside-diphosphate reductase n=3 Tax=Veillonella RepID=D1BPH5_VEIPT Length = 760 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 209/789 (26%), Positives = 367/789 (46%), Gaps = 67/789 (8%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 +++ KRDG E ++++K R++ +A GL + ++E+ + +QF DG+ T +I +T+++ Sbjct: 3 IMIKKRDGHFEPLSVEKTKRMIAFACLGLDSCDPLELEMDAKLQFVDGMTTKEIQKTLVQ 62 Query: 65 AAADLI------------SRDAPDYQYLAARLAIFHLRKKA-----YGQFEPPALYDHVV 107 A + + ++ D+Q++AARL +F L K+A Y F + V Sbjct: 63 TAIEKVISKKDDGFGNQVNKMNQDWQFVAARLFLFDLYKEAAITRRYKAFGYGNFPNLVN 122 Query: 108 KMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYE 167 +VE KY + + +YT +E +++ +I RD F+Y +K L +YLV+ EI+E Sbjct: 123 MLVEEKKYADFFVTEYTADELQELGDYIKPKRDYLFNYEGLKLLADRYLVKG-FNKEIFE 181 Query: 168 SAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVL 227 Q ++ +A L + +++Y K+FYD +S K++ TP ++ TP Q SSC + Sbjct: 182 LPQERFMAIAMHLALVEGK-NKVKYAKKFYDLMSQLKMTTATPTLANAGTPFHQLSSCFI 240 Query: 228 IECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQT 287 D+L SI +S + +GI G++RAL S IRG + G IP+ + + Sbjct: 241 SGVDDNLWSIYDVNSKFSRVSKHGGALGIYLGKVRALNSDIRGFKNSSGGVIPWIRLYND 300 Query: 288 AVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRL 347 + Q G R G AT+ +WH + + L+ N G + + + + + + R+ Sbjct: 301 TAVAVDQLGKRKGGATVTLDIWHKDFYEFVELRTNNGDDRRKAHDIFPAISVPNIFMERM 360 Query: 348 LKGEDITLFSPSDVPGLYDAFFA------DQEEFERLYTKYEKDDSIRKQRVKAVELFSL 401 L E+ TLF P ++ + D++EF + Y + E+D ++ V A+++ Sbjct: 361 LARENFTLFDPHEILAVKGYSLENYFDTDDKKEFTKRYIECEQDPNLHGIEVPALDMMKK 420 Query: 402 MMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND------- 454 +M+ TG +I D N +P + + SNLC EIA N + Sbjct: 421 IMRSAVETGTPFIFFRDTVNAANP-NKHAGMIYASNLCHEIAQNVGFTNLAEEIINEDGT 479 Query: 455 -----ENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMG 509 G++ C L++ +LG I + +ELEE L +R LD ++ P+P ++ + Sbjct: 480 ITTKTNTGDMVTCNLNSISLGRITD-EELEENIALQIRMLDNVISINQAPVPESRMTSDK 538 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 R +G+G + +YL H ++ + K FE I +Y +KAS ELAKE+GA P F Sbjct: 539 YRAIGLGTSGYHHYLVNHDIQWESDEHIEVADKLFENIAFYAIKASMELAKEKGAYPAFK 598 Query: 570 ETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS 629 + + G W+ L + +G+RN L A+ P+ ++S I+ Sbjct: 599 GSEWETGEYFT----------RRGYTSDRWKQLAADVAKYGIRNGYLMAVAPTGSTSNIA 648 Query: 630 NATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFI 689 N T GI+P I+ K + PD ++ G+ Q+ I Sbjct: 649 NTTAGIDPIFKKFFIEEKKGSFTPKTAPDLNDKTFWLYKEAHTIDQQWSIKACGVRQRHI 708 Query: 690 DQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSI 749 DQ+ S N P + +++L + AYK G+KT+YY + S+ Sbjct: 709 DQAQSFNLYITPQ------MKAKEILDLYVEAYKQGIKTIYYIRNQ------------SL 750 Query: 750 QDDGCESGA 758 + D C S + Sbjct: 751 EMDECTSCS 759 >UniRef50_C8XUI7 NrdA ribonucleoside-diphosphate reductase alpha subunit n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI7_9CAUD Length = 759 Score = 713 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 359/767 (46%), Positives = 513/767 (66%), Gaps = 21/767 (2%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + V KRDGS+ +++K H V+D A +GL VS+S+V S IQF D ++T I + +I+ Sbjct: 2 INVIKRDGSSVPFDIEKPHEVVDRACDGLTGVSMSEVIAASKIQFTDNMRTDRIQDILIQ 61 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYT 124 AAA LIS D P+YQY+AARL + LRK YGQ++PP L D VK ++ YD L+ YT Sbjct: 62 AAASLISVDKPNYQYVAARLKSYDLRKAVYGQYKPPHLLDIFVKNIKQRVYDREFLDLYT 121 Query: 125 EEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGE---IYESAQFLYILVAACLF 181 EEF +++ I+H RD F++AA+ QL KYL+++R + YE+ Q +Y+ +A LF Sbjct: 122 TEEFNELNDVINHKRDKNFTWAAMGQLTEKYLLRDRSKKDSKIFYETPQVMYMGIAMALF 181 Query: 182 SNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATS 241 SN+ +++RL+ VK+FY+ ST K SLPTPIM+GVRTPTRQFSSCVLI+ GD+LDSINAT+ Sbjct: 182 SNWDKDSRLEMVKKFYEYASTGKFSLPTPIMAGVRTPTRQFSSCVLIKTGDTLDSINATA 241 Query: 242 SAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGA 301 IV YVS+RAGIG + G IR +GSPIRGGE HTG IPF K+ A+KSCSQGG+RGGA Sbjct: 242 KTIVDYVSKRAGIGFDVGAIRGIGSPIRGGEMVHTGLIPFIKYLTGALKSCSQGGIRGGA 301 Query: 302 ATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDV 361 AT + P+WH + + ++VLKNNRG E NR R +DYG+QIN++M+ RL+ + + LF P D Sbjct: 302 ATAYIPLWHYQFDDVVVLKNNRGTEENRERRIDYGIQINRVMFERLVAKQPLYLFDPKDN 361 Query: 362 PGLYDAFFADQEEFERLYT---KYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 +Y+A+FAD ++F LY K +R ++++A E+F +++ +R+ TGRIYI VD Sbjct: 362 REMYEAYFADVDKFRTLYENMIKAADAGLVRSKKLQAEEVFQMLLDQRSDTGRIYIAFVD 421 Query: 419 HCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDEL 478 H N +SPF+ + + SNLCLEIALPT+ NDENG +ALCTL++FNL A + E+ Sbjct: 422 HMNEYSPFN--LDTIYSSNLCLEIALPTREFEQYNDENGRVALCTLASFNLTAFEDPTEM 479 Query: 479 EELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 E++A + V ALD LL+YQDYP A++ R LG+G++N A++LAK+ Y + Sbjct: 480 EDVAFVLVSALDMLLEYQDYPAIQARKAVEDYRPLGVGIVNVAHFLAKNFTGYGSPAGLE 539 Query: 539 LTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN------ 592 + + +YL+KASN LA + GAC T + G + D LD + N Sbjct: 540 MLDAWMAHLHFYLVKASNRLAMKFGACK--RGTIHGMGQVTADLQPLPLDILPNGKKPEG 597 Query: 593 EPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGIL 652 DW+ L++ +KT+G+RN+TL A+ P+E+SSQ+ NATNGIEPP+G VSIK SKDG Sbjct: 598 MAYGLDWDDLKDDLKTYGIRNATLLAVAPTESSSQVLNATNGIEPPKGLVSIKGSKDGTY 657 Query: 653 RQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQ 712 +QVVPD E L Y+L W++ + YL+ ++Q+++DQSIS NT YDP ++P GK+P Sbjct: 658 KQVVPDVETLGPLYDLKWDLDCIE-YLKTAAVIQRWVDQSISTNTWYDPEKYPDGKIPRA 716 Query: 713 QLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGAC 759 ++++D+L+ Y +G KTLYY +D ED + ++ C++ Sbjct: 717 KMMQDILSFYMWGGKTLYYNTNKDAKEDEE----LKQAEEVCDTCVV 759 >UniRef50_Q9QAL9 Ribonucleoside-diphosphate reductase n=2 Tax=Shrimp white spot syndrome virus RepID=Q9QAL9_WSSV Length = 848 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 197/817 (24%), Positives = 333/817 (40%), Gaps = 96/817 (11%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAE---------GLHNVSISQVELRSHIQFYDG 52 Q ++KR+G+ + I+L+KI + ++ A + ++ ++ + Sbjct: 5 QQQSFISKRNGTKQEISLEKIIKRIENACLPVNQYVPKLDKNAINPQELASHIMDRLPAT 64 Query: 53 IKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKA--YGQFEPPALYDHVVKMV 110 I ++ + + A I D PD+ LA R ++ K + F Sbjct: 65 ISFQEMDDFLADYAKTKI-VDHPDFGKLAGRFICSNIHKNTKEWNSFSATTQKLRHAIHP 123 Query: 111 EMGKYDNHLLEDYTEEEFKQ---MDTFIDHDRDMTFSYAAVKQLEGKYLVQ-----NRVT 162 GK + + + Y E +D ID+ D F+ ++ LE YL++ +R Sbjct: 124 GTGKPASVVNDTYYENVMANAEILDAVIDYKMDYLFTCFGLRTLEYSYLIKIGSPTDRKK 183 Query: 163 GEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQF 222 + E Q + + VA + + ++ V YD +S + +P + T T Q Sbjct: 184 RILVERPQDMIMRVAVGIHG-----SDIKSVIETYDLMSRHYFTHASPTLFNCGTVTPQL 238 Query: 223 SSCVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF 281 SSC L+ DS++ I T G+GI+ +RA GSPI H G + F Sbjct: 239 SSCFLLGLQDDSIEGIYDTLKEAAIISKTAGGLGIHFHDLRAKGSPISSWSGTHPGLMAF 298 Query: 282 YKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQIN 340 + F +VK SQGG R GAA ++ WHL+V+ + + N G E R R + + ++ Sbjct: 299 LQIFNVSVKKVSQGGDKRRGAAAIYISDWHLDVKDFIDCRKNAGNEDLRTRDLFPAIWVS 358 Query: 341 KLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFS 400 L R+ G++ +L P + PGL D EEF+ LY KYE + K+ VKA LF Sbjct: 359 DLFMERVKAGKNWSLMCPHECPGLSDVH---GEEFKALYEKYEAEGK-GKEVVKARALFD 414 Query: 401 LMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIA 460 + R TG Y+ D N S + ++ SNLC EI + ++ E A Sbjct: 415 QINSARIETGTPYVCFKDTINRKSN-QENVGIIKSSNLCTEIVQYS--------DSEETA 465 Query: 461 LCTLSAFNLGAIN------------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAM 508 +C L++ + + E++ + + R LD ++D Y + + M Sbjct: 466 VCNLASIAVNKFVKYSPIPSLRPYVDYREMKRVVKIMTRNLDKVIDVNFYAVDKTRISNM 525 Query: 509 GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPW 567 R +G+GV A K + A + + FE I Y L+AS E+AKE+G Sbjct: 526 KTRPMGLGVQGLADLFFKLRIPFESEEAALINKRIFETIYYGALEASCEIAKEKGETYEL 585 Query: 568 FNETTYAKGILPIDTYK---KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET 624 F + +KGI D K K+ D N +DWE LR I +G+ NS A MP+ + Sbjct: 586 FEGSPLSKGIFQFDMGKENIKNRDIYFNSLPIHDWEQLRRDIMKYGVHNSMFVAPMPTAS 645 Query: 625 SSQISNATNGIEPPRGYVSIKASKDGILRQV----------------------------- 655 ++QI + EP + + G + V Sbjct: 646 TAQILGNSESFEPLTSNMYNRNVLSGSFQVVNEYVIRELIKLGEWNSVTKQRIMASGGSI 705 Query: 656 ---VPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQ 712 + + ++ +WE+ L + F+DQ+ S N + Sbjct: 706 QTLPNIPKSTKELFKTVWEI-NPRTTLDMAIQRGMFVDQAQSLNLFVEEPEL-------S 757 Query: 713 QLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSI 749 ++ + A++ G+KTLYY T+ A Q + ++ Sbjct: 758 KVRSMTMYAWEKGIKTLYYLRTKGAARAVQFTVDKNV 794 >UniRef50_A9KRT3 Ribonucleoside-diphosphate reductase n=2 Tax=Clostridiales RepID=A9KRT3_CLOPH Length = 764 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 211/793 (26%), Positives = 362/793 (45%), Gaps = 69/793 (8%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETII 63 ++++ KR+ + E + ++K R++ +A EGL ++EL + IQF DG+ T +I + ++ Sbjct: 2 DIMIKKRNQTYEPLCVEKTKRMIAFACEGLEGCDPIELELDARIQFVDGMSTKEIQKMLV 61 Query: 64 KAAADLISRDAPD------------YQYLAARLAIFHLRKKA-----YGQFEPPALYDHV 106 + A + + D +QY+AARL +F L K+A Y F + V Sbjct: 62 QTAIEKVIHTKKDEFGNIMRETHTNWQYVAARLFVFDLYKEAAIERHYKHFGYGDFLNLV 121 Query: 107 VKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIY 166 +VE Y ++L + YT+ E K++ +I +RD F+Y VK L +YLV+ + E++ Sbjct: 122 NSLVEEELYGSYLTDAYTQLEIKELGAYIKPERDYLFNYEGVKLLSDRYLVKG-LKKEVF 180 Query: 167 ESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCV 226 E Q ++++A L + R++Y K+FYD +S+ ++++ TP ++ TP Q SSC Sbjct: 181 ELPQERFMVIAMHLAIPEEKAKRMEYAKKFYDLLSSLQMTVATPTLANAGTPFYQLSSCF 240 Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ 286 + GD+L SI + +GI G+IRAL S IRG + G IP+ + + Sbjct: 241 ISVVGDNLWSIYDVNQKFSSVSKHGGALGIYVGKIRALNSEIRGNKNASGGVIPWVRLYN 300 Query: 287 TAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR 346 + Q G R G AT+ +WH ++ L LK N G + + + + + L R Sbjct: 301 DTAIAVDQLGRRKGGATITLDIWHADLYDFLDLKTNNGDDRRKAHDIFTALSVPNLFMER 360 Query: 347 LLKGEDITLFSPSDVPGLYDAFFAD------QEEFERLYTKYEKDDSIRKQRVKAVELFS 400 L + E+ +LF P V + D + EF + Y E+ + + V A+E+ Sbjct: 361 LERREEWSLFDPYLVNKVMGFSLEDSYDEVAENEFTKRYLACEECKELPRITVPALEVMK 420 Query: 401 LMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND------ 454 +M+ TG +I D N +P + + SNLC EI + Sbjct: 421 RIMKSAVETGAPFIFFRDTVNQANP-NKHAGMIYSSNLCQEITQNMSESELREELIQDES 479 Query: 455 ---------ENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKR 505 + G++ C L++ +LG I +L L +R LD ++ P+ A+ Sbjct: 480 GAKVIITKIKPGDMVTCNLNSISLGRIEK-KDLAVNIPLQIRMLDNVITLNQTPVAEARI 538 Query: 506 GAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGAC 565 + R +G+G + +YL HG + FE I Y +KAS ELAKE+G Sbjct: 539 TSDKYRAIGLGTSGYHHYLVNHGIGWETQKHLEEADDLFEEIAYQAIKASMELAKEKGKY 598 Query: 566 PWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETS 625 F+ + + G Y K D ++ W AL + + HG+RN ++A+ P+ ++ Sbjct: 599 EAFHGSEWETGE-----YFKRRDYTSDR-----WLALSKEVAEHGMRNGYITAVAPTGST 648 Query: 626 SQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIM 685 S I+N + GI+P I+ K + + PD + ++ GI Sbjct: 649 SNIANTSAGIDPIFKRYFIEEKKGSFIPKTAPDLNTSNFWLYKEAHTIDQQFSIRACGIR 708 Query: 686 QKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDL 745 Q+ IDQS S N P + +L + A++ G+KT+YY + Sbjct: 709 QRHIDQSQSFNLYITP------EYKAIDILNLYMEAWRKGLKTIYYVRNQ---------- 752 Query: 746 VPSIQDDGCESGA 758 S++ D C S + Sbjct: 753 --SLEMDECTSCS 763 >UniRef50_A4XD09 Ribonucleoside-diphosphate reductase n=44 Tax=Bacteria RepID=A4XD09_SALTO Length = 909 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 199/780 (25%), Positives = 325/780 (41%), Gaps = 76/780 (9%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHET 61 Q + V KR+G TE ++++KI R ++ L V +V ++ YDG T+++ Sbjct: 114 RQVMGVRKRNGDTEPVDVNKIVRAVERWVADLDEVDPLRVATKTISGLYDGATTAELDRL 173 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE 121 I+ AA+LI + P Y LAARL ++ K+ GQ + + + +G + Sbjct: 174 SIQTAAELIG-EEPQYSKLAARLLAAYVDKEVRGQ-QVASFSQSIRYAHGLGLISDE-TA 230 Query: 122 DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF 181 + +++D +D D+ F Y ++ + +YL+++ + + E+ Q+ + VA L Sbjct: 231 AFVSRNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQYWLLRVACGLS 290 Query: 182 SNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG-DSLDSINAT 240 FY +S+ +P + T Q SSC L++ D LDSI Sbjct: 291 GTPAE------AIGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYQR 344 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 + K GIGI R+R G+ IRG G +PF K V + +QGG R G Sbjct: 345 YHQVAKLSKFSGGIGIAWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGGRRKG 404 Query: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 AA ++ WH ++E L L++N G + R +++ + R+ D +L PS+ Sbjct: 405 AACVYLEPWHPDIEEFLELRDNTGEDARRTHNLNLANWLPDEFMRRVEADGDWSLIDPSE 464 Query: 361 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC 420 P L D + EEF+ Y EK + VKA +L+ MM+ A TG ++ D Sbjct: 465 APELPDLY---GEEFDAAYRVAEK---KAVRTVKARDLYGRMMRTLAQTGNGWMTFKDRS 518 Query: 421 NTHSPFDPAIAP-VRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NN 474 NT S + SNLC EI + + E A+C L + NLGA + Sbjct: 519 NTLSNQTGEPGNTIHLSNLCTEILEV--------NNDAETAVCNLGSVNLGAHVTADGVD 570 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 ++L + AV LD ++D YP A R +G+G++ + Sbjct: 571 WEKLRDTVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFFTLRLPFDSA 630 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP 594 A+ L+ + E I L+ S LA+ G P + +T A+G L + + + ++P Sbjct: 631 EASELSTRVQEEIFLTALETSAGLAERFGPHPAYAQTRAARGDLHPELWG----AVPSQP 686 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQ 654 W L+ + HGLRNS L A+ P+ T + I+ IEP + + + G Q Sbjct: 687 QR--WAGLKARVGEHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGEFLQ 744 Query: 655 VVPD--------------------------------YEHLHDAYELLWEMPGNDGYLQLV 682 V + + + WE+P + L Sbjct: 745 VNTYLVGELKARGLWTASIRDQIKRAEGSVQGLAELPAEVRELFRTAWELP-QRALIDLA 803 Query: 683 GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQ 742 +IDQS S N + +L L A+K G+KT YY +R Q Sbjct: 804 AARAPYIDQSQSLNLFLAAP-------TIGKLSSMYLYAWKSGLKTTYYLRSRPATRIQQ 856 >UniRef50_Q75BW6 Ribonucleoside-diphosphate reductase n=2 Tax=Saccharomycetaceae RepID=Q75BW6_ASHGO Length = 864 Score = 699 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 214/826 (25%), Positives = 337/826 (40%), Gaps = 103/826 (12%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGL--HNVSISQVELRSHIQFYDGIKTSDIH 59 + +++ G TE + K+ L GL ++ I + R I+ S++ Sbjct: 5 KKIFIISDDSGLTEAFDERKLLESLRKLQFGLKINDADIDKAVKRIAAGIGGDIRDSELV 64 Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDN-- 117 I + A +I+R PD+ LAAR+ I L K+ G ++ + E G Sbjct: 65 AYIGETLASMITR-HPDFSLLAARVEIKVLHKRLLG----LGFTGNLAVLCESGDSPEGH 119 Query: 118 -----------------HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR 160 L D + +D ID D TF+Y K L YL+++ Sbjct: 120 ATKRKRAMSPCTRGPVRRELYDLAVQHRNIIDQAIDDTLDFTFTYFGWKTLCKSYLLKH- 178 Query: 161 VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR 220 G ++E+ Q++++ VA L + V Y ++ +P + T ++ Sbjct: 179 -QGRVHETPQYMFMRVALALHG---PSGDIDRVLETYRLMANKYFIHASPTLFNAGTTSQ 234 Query: 221 QFSSCVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCI 279 SSC L+ DS+D I GIGI+ IRA GS I G G + Sbjct: 235 FLSSCFLLGIHEDSIDGIYNALHKAALISKASGGIGIHVSDIRANGSYISGTNGTSNGLV 294 Query: 280 PFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 P F + + QGG R GA ++ WH +V L L+ N G E R R + YG+ Sbjct: 295 PMLSVFNSTARYVDQGGNKRPGAFCIYLEPWHADVFDFLRLRRNHGKEEMRARDLFYGLW 354 Query: 339 INKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVEL 398 I L R+ + +LFSP++ GL D + E FE+LY +YE+ + +RVKA EL Sbjct: 355 IPDLFMKRVENNGEWSLFSPNEAVGLSDCY---GEAFEQLYVRYER-ELEPYRRVKAQEL 410 Query: 399 FSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGE 458 + ++ + TG ++ D CN+ S + ++ SNLC EI + E Sbjct: 411 WREILLSQTETGGPFMLYKDACNSKSN-QKNLGTIKSSNLCCEIVEYSS--------RDE 461 Query: 459 IALCTLSAFNLGAI---------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMG 509 +A+C L++ L + L + + R LD +D DYP+P A+R Sbjct: 462 VAVCNLASVALPTFVSVTSDAITFDYARLHSVVKVMTRNLDKAIDIGDYPVPEAERSNKK 521 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 R L +GV A ++ A + + FE I + ++ S ELA E G F Sbjct: 522 HRPLALGVQGLADVFMLMRFPFNGEEAAQMNREIFETIYHAAVETSIELAAEYGVYASFV 581 Query: 570 ETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH-GLRNSTLSALMPSETSSQI 628 + +KG L D + ++ D + L+ DW+ L+E IK+ GLRNS L MP+ ++SQI Sbjct: 582 GSPASKGELQFDLWGRNKDNY--QFLYDDWDELKEKIKSGPGLRNSLLVGPMPTASTSQI 639 Query: 629 SNATNGIEPPRGYVSIKAS--------------------------------KDGILRQVV 656 T EP + + G ++ + Sbjct: 640 LGFTESFEPMTSMIYTRRVLSGEYTLVNKYMVQDFCDLGIWSEELKNRIIKDGGSIQGID 699 Query: 657 PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLK 716 L D Y+ +WE+P + L F+DQS S N M +L Sbjct: 700 GIPPDLKDLYKTVWELPQRK-LIDLSADRAPFVDQSQSLNLFLKEP-------TMGKLTS 751 Query: 717 DLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 A+K G+KT +YY T+ A Q L D+ SG K+ Sbjct: 752 MHFYAWKKGLKTGMYYLRTQAAANAIQFTLT----DENTLSGPVKL 793 >UniRef50_C5DEU8 Ribonucleoside-diphosphate reductase n=2 Tax=Saccharomycetales RepID=C5DEU8_LACTC Length = 867 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 210/825 (25%), Positives = 330/825 (40%), Gaps = 98/825 (11%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGL--HNVSISQVELRSHIQFYDGIKTSDI 58 M +V+ R+G ++ + + L A GL + V R S + Sbjct: 1 MTVKTVVSDRNGEANKLTSQALAQSLKQLAGGLQIEDADFDAVSRRILDAVPPSATHSSV 60 Query: 59 HETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYG---------------QFEPPALY 103 + + A + S PD+ LAAR I L KK G + P + Sbjct: 61 VQFGGEVLAAM-STTHPDFANLAARWEISELHKKLQGLSFTENLALLQKLRSSSKAPTVK 119 Query: 104 DHVVKMVEMGKYDNHLLEDYTEEEFK---QMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR 160 H K N + + E + +D I DRD FSY K L YL++ R Sbjct: 120 RHKTSTSHNDK--NLISAAFYEMALRYQTTLDAAIQPDRDFDFSYFGWKTLSKSYLIK-R 176 Query: 161 VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR 220 E +E+ QFL++ VA + + V YD +S +P + T + Sbjct: 177 KNEETHETPQFLFMRVALAIHG---PRGDIDAVLETYDLMSRKFFIHASPTLFNAGTVNQ 233 Query: 221 QFSSCVLIE-CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCI 279 SSC L+ DS+D I T G+G++ +R G+ I G G + Sbjct: 234 YLSSCFLVAMIEDSIDGIYRTLHKTAMISKASGGVGVHVSNVRGTGAYISGSNGTSNGLV 293 Query: 280 PFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 P + F + QGG R GA ++ WH +V L L+ N+G E R R + + Sbjct: 294 PMLRVFNNTARYVDQGGNKRPGAFCIYLEPWHSDVLDFLQLRKNQGKEELRARDLFLALW 353 Query: 339 INKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVEL 398 I L R+ + LFSP + PGL + F EEF++LY YEK +++ A +L Sbjct: 354 IPDLFMERVEQNGSWCLFSPDEAPGLQECF---GEEFKKLYETYEK-TLAPAKKMPAQKL 409 Query: 399 FSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGE 458 +S ++Q + TG ++ D CN S + ++ SNLC EI + P E Sbjct: 410 WSEILQSQVETGGPFMLYKDSCNNKSN-QKNLGTIKSSNLCCEIVQYSSPS--------E 460 Query: 459 IALCTLSAFNLG---------AINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMG 509 A+C L++ L AI + + L ++ + + LD+++D DYP+ AK Sbjct: 461 TAVCNLASVALPSFVKLQREQAIFDFESLHKIVKVLTKNLDSVIDICDYPVEDAKFSNEK 520 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 R + IGV A L + SA L + FE I + ++ S E +K+ G P F+ Sbjct: 521 NRPIAIGVQGLADALMILRIPFHSESARVLNKQIFETIYHAAVETSIERSKKLGPYPSFD 580 Query: 570 ETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS 629 + ++G D + + D E L DW+ +RE +K HG+RNS L MP+ ++SQI Sbjct: 581 NSPVSRGEFQFDLWGLNDDNY--EFLFSDWKEMREKVKQHGIRNSLLVGPMPTASTSQIL 638 Query: 630 NATNGIEPPRGYVSIKASKDGIL--------------------------------RQVVP 657 T EP + + G + + Sbjct: 639 GFTESFEPMTSNIYTRRVLSGEFTVINKYMVDDFCRLGIWNEKLKNRIIEQNGSIQGIEG 698 Query: 658 DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKD 717 +L + Y +WE+P + L FIDQS S N M +L Sbjct: 699 IPSNLKELYRTVWEIP-QRVMIDLSADRGPFIDQSQSLNLFLREP-------TMGKLTSM 750 Query: 718 LLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 +K G+KT +YY T+ + + +I + GA I Sbjct: 751 HFYGWKKGLKTGMYYLRTQAASGAIKF----TINQENTLRGAVSI 791 >UniRef50_Q8JKL8 Ribonucleoside-diphosphate reductase n=1 Tax=Heliothis zea virus 1 RepID=Q8JKL8_9VIRU Length = 939 Score = 694 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 196/790 (24%), Positives = 327/790 (41%), Gaps = 90/790 (11%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHN------VSISQVELRSHIQFYDGIKTSDIH 59 ++ KR+GS ER + K++ ++ ++I+ + YD + T ++ Sbjct: 7 MIVKRNGSVERFDPSKLYARIERCMTMSEPRLTTAFINIAGIVADVEKGLYDRVSTLELD 66 Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHL 119 + + A + S PD+ LAAR+A+ L K+ +F + + + E + Sbjct: 67 TLLSETCASM-STAHPDHSILAARIAMQALHKRTRSKFS-----ETIRDLYEANIVPQYY 120 Query: 120 LEDYTEEEFKQMDTFIDHDRDM-TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 D +E +D+ I DRD + +Y A K LE YL++ G+I E Q +Y+ A Sbjct: 121 F-DLVQEHADTLDSAIVDDRDFQSLTYFAYKTLERTYLIK-LADGKICERVQHMYMRTAL 178 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSI 237 + ++ V Y+ +S TP + T ++SC L+E DS+ + Sbjct: 179 GIHG-----RDIESVIETYNLLSNRYYVHSTPTLCHAATNRSNYASCYLLELKEDSIGGV 233 Query: 238 NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG- 296 T G+G++ ++R S I +G +P + + + +QGG Sbjct: 234 MDTLKDAATISKHCGGVGLHVHKLRCKNSTIHSTNGNASGLVPMLRMYNAMSRYVTQGGN 293 Query: 297 VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLF 356 R GA ++ WH +V + ++ N G E R R + Y + + L R+ G +L Sbjct: 294 KRPGAIAVYLEPWHADVFDFIEMRKNSGFEEARARDLFYALWVPDLFMKRVNDGGYWSLM 353 Query: 357 SPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQN 416 P PGL D + EEFE YT YE++ +RV A EL+ ++ + TG YI Sbjct: 354 CPDSSPGLSDCW---GEEFEAKYTAYEQEGRYV-RRVDARELWKAIVTAQVETGTPYILY 409 Query: 417 VDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL-----GA 471 D N +S + ++ SNLC EI P E A+C L++ NL G Sbjct: 410 KDTVNRNSN-QRHLGTIKGSNLCTEIVEYASP--------DETAVCVLASVNLPKFVEGK 460 Query: 472 INNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRY 531 + NL+ L + L R L+ ++D YPIP+A + R +GIGV +A LA G Y Sbjct: 461 VFNLNLLAKTVRLVTRNLNKIIDNALYPIPSAAKSNFKHRPIGIGVQGYADALAMMGIAY 520 Query: 532 SDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA 591 + L FE I + L S +LA+ G ++ + ++G L D Y Sbjct: 521 --EDSMQLNRDIFETIYHAALTESCQLARVHGVYESYHGSPTSRGELHFDRYSV------ 572 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI 651 DW +LR+ I +GLRNS L A MP+ T+SQ+ EP + + ++ G Sbjct: 573 -HSQKCDWSSLRKDIARYGLRNSLLVAPMPTATTSQVFGNAESFEPFTSNMYQRRTQSGE 631 Query: 652 L--------------------------------RQVVPDYEHLHDAYELLWEMPGNDGYL 679 + + E L Y+ +WE+P + Sbjct: 632 FQLTNVHLVRDLERLNLWNDDMAQLIMYNNGSIQNITIIPEELRRIYKTVWEIPT-KTLI 690 Query: 680 QLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGA 738 + +IDQS S N + ++ A+ G+KT +YY T+ Sbjct: 691 DMAADRGAYIDQSQSFNLYVAEPTY-------SRMTSIHFYAWNKGLKTGMYYLRTKSAT 743 Query: 739 EDAQDDLVPS 748 + + Sbjct: 744 NAIPFTVDVN 753 >UniRef50_C5DY80 Ribonucleoside-diphosphate reductase n=1 Tax=Zygosaccharomyces rouxii RepID=C5DY80_ZYGRO Length = 875 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 203/814 (24%), Positives = 332/814 (40%), Gaps = 101/814 (12%) Query: 16 RINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRD 73 N + + L + GL+ + ++ + D ++ + + A L S Sbjct: 16 EYNPPLMRQKLRELSFGLNLDYLDFDKIVQKISSGVPDDVEGWQVIRHAAETVASLTSI- 74 Query: 74 APDYQYLAARLAIFHLRKKA--------------------YGQFEPPALYDHVVKMVEMG 113 PD+ LAARL I L K G P+ V++ + G Sbjct: 75 HPDHSILAARLEIDELHKSLRGITFTENLKQLRSSTRVTSEGDNRVPSKRQKVMRAPKKG 134 Query: 114 KYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLY 173 L+ + E K+++ I H+RD F+Y K L YL++ +I+E+ QFL+ Sbjct: 135 VISEEFLQMALKYE-KKLNDAIVHERDFNFTYFGWKTLCQSYLIKKNAD-QIHETPQFLF 192 Query: 174 ILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GD 232 + VA + + + V Y+ +S +P + T + SSC L+ D Sbjct: 193 MRVALAIHGPFE---DIDSVIETYELMSRKYFIHASPTLFNAGTVNQYLSSCFLVGMKED 249 Query: 233 SLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSC 292 S++ I T GIGI+ IRA G+ + G G +P + F + Sbjct: 250 SIEGIFKTLEDTALISKASGGIGIHVSNIRASGAHVSGSNGTSNGIVPMLRVFNNTARYV 309 Query: 293 SQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 QGG R GA ++ WH +V L L+ N G + R R + + + I L R+ Sbjct: 310 DQGGNKRPGAYCIYLEPWHSDVFDFLQLRKNHGKDELRARDLFFALWIPDLFMKRVQCNG 369 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR 411 + +LFSP + PGL D + +EFE LY +YE ++ +RVKA +L+S ++Q + TG Sbjct: 370 EWSLFSPDEAPGLSDVY---GKEFEELYEQYEA-TALPMKRVKAQKLWSEILQAQVETGG 425 Query: 412 IYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL-- 469 ++ D CN S + ++ SNLC EI + E A+C L++ L Sbjct: 426 PFMLYKDSCNLKSN-QKNLGTIKSSNLCCEIVEYSS--------KDETAVCNLASVALPT 476 Query: 470 --------GAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFA 521 G+I + +L + R LD ++D YPIP A+ + R IGV A Sbjct: 477 FVVQVTNKGSIFDFVKLHAVVKTITRNLDRVIDVCKYPIPQAQYSNLRNRPEAIGVQGLA 536 Query: 522 YYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPID 581 Y A L + FE I + ++ S ELA+E GA F + ++G+L D Sbjct: 537 DVFLMLRIPYESQEARILNTQIFETIYHAAVETSIELAEEYGAYETFQGSPASQGLLQFD 596 Query: 582 TYKKDLDTIANEPLHYDWEALRESIKTH-GLRNSTLSALMPSETSSQISNATNGIEPPRG 640 + + D + L+ DW L+ I+ GLRNS L MP+ ++SQI T EP Sbjct: 597 LWGLNEDNY--DFLYRDWGELKHRIQNGRGLRNSLLLGPMPTASTSQILGYTESFEPMTS 654 Query: 641 YVSIKASKDGIL--------------------------------RQVVPDYEHLHDAYEL 668 V + G + + + + Y Sbjct: 655 NVYARRVLSGEFINVNQYMVDHFCQLGIWNEKLKNRIIADNGSVQNIQGLPDWIKKIYRT 714 Query: 669 LWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT 728 +WE+P + + FIDQS S N M +L A++ G+KT Sbjct: 715 VWEIP-QRPLIDMARDRSPFIDQSQSLNLFMKTP-------TMGKLTSMHFHAWRHGLKT 766 Query: 729 -LYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 +YY T+ + Q ++ D+ +G+ ++ Sbjct: 767 GMYYLRTQAASAAIQF----TVNDENTLTGSVEL 796 >UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alpha n=148 Tax=cellular organisms RepID=RIR1_CHLTR Length = 1047 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 227/796 (28%), Positives = 347/796 (43%), Gaps = 78/796 (9%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGL-HNVSISQVELRSHIQFYDGIKTSDIHETIIKA 65 V +DGST + ++ L A + + + FY GIK S++ I A Sbjct: 239 VLSKDGSTYTMTHSQLLAHLARACSRFPETTDAALLTDMAFANFYSGIKESEVVLACIMA 298 Query: 66 AADLISRDAPDYQYLAARLAIFHLRKKAYGQFE-----PPALYDHVVKMVEMGKYDNHLL 120 A I ++ PDY ++AA L + + K+A G+ + A DH + + G Sbjct: 299 ARANIEKE-PDYAFVAAELLLDVVYKEALGKSKYAEDLEQAHRDHFKRYIAEGDTYRLNA 357 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 E + + +D RD+ FSY ++ L +Y N G E+ Q ++ VA L Sbjct: 358 ELKHLFDLDALADAMDLSRDLQFSYMGIQNLYDRYF--NHHEGCRLETPQIFWMRVAMGL 415 Query: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT 240 N +T + FY+ +STF+ + TP + Q SSC L D+L +I Sbjct: 416 ALNEQDKT--SWAITFYNLLSTFRYTPATPTLFNSGMRHSQLSSCYLSTVQDNLVNIYKV 473 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 + GIG + IRA G+ I+G G IPF K + +QGG R G Sbjct: 474 IADNAMLSKWAGGIGNDWTAIRATGALIKGTNGRSQGVIPFIKVTNDTAVAVNQGGKRKG 533 Query: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 A ++ +WHL+ E L L+ N G E R ++ I L + RL + TLFSP D Sbjct: 534 AVCVYLEVWHLDYEDFLELRKNTGDERRRAHDVNIASWIPDLFFKRLQQKGTWTLFSPDD 593 Query: 361 VPGLYDAFFADQEEFERLYTKYEKD---DSIRK-QRVKAVELFSLMMQERASTGRIYIQN 416 VPGL+DA+ EEFERLY +YE+ IR ++V+A +L+ M+ TG ++ Sbjct: 594 VPGLHDAY---GEEFERLYEEYERKVDTGEIRLFKKVEAEDLWRKMLSMLFETGHPWMTF 650 Query: 417 VDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL-----GA 471 D N S D VR SNLC EI L N E A+C L + NL G Sbjct: 651 KDPSNIRSAQD-HKGVVRCSNLCTEILL--------NCSETETAVCNLGSINLVQHIVGD 701 Query: 472 INNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRY 531 + ++L E +AVR LD ++D YP AK R +G+GV+ F L K Y Sbjct: 702 GLDEEKLSETISIAVRMLDNVIDINFYPTKEAKEANFAHRAIGLGVMGFQDALYKLDISY 761 Query: 532 SDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDT------YKK 585 + A + E I YY ++AS LAKE+G + + + +G+LPIDT Y+ Sbjct: 762 ASQEAVEFADYSSELISYYAIQASCLLAKERGTYSSYKGSKWDRGLLPIDTIQLLANYRG 821 Query: 586 DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIK 645 + + + DWE +R +K HG+R+ L A+ P+ T S I T IEP ++ +K Sbjct: 822 EANLQMDTSSRKDWEPIRSLVKEHGMRHCQLMAIAPTATISNIIGVTQSIEPTYKHLFVK 881 Query: 646 ASK--------------------------------DGILRQVVPDYEHLHDAYELLWEMP 673 ++ DG L ++ +HL + +E+ Sbjct: 882 SNLSGEFTIPNVYLIEKLKKLGIWDADMLDDLKYFDGSLLEIERIPDHLKHIFLTAFEI- 940 Query: 674 GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQN 733 + ++ QK+ID S N ++L LTA+K G+KT YY Sbjct: 941 EPEWIIECASRRQKWIDMGQSLNLYLAQPD-------GKKLSNMYLTAWKKGLKTTYYLR 993 Query: 734 TRDGAEDAQDDLVPSI 749 + + + + Sbjct: 994 SSSATTVEKSFVDINK 1009 >UniRef50_C7NLI3 Ribonucleoside-diphosphate reductase n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NLI3_KYTSD Length = 875 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 203/811 (25%), Positives = 320/811 (39%), Gaps = 107/811 (13%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETII 63 + V KR G E++++ KI ++ +GL V +V ++ YDG T+++ + I Sbjct: 35 TMRVVKRSGEHEQVDVTKIVAAVERCCDGLPEVDPLRVATKTISGLYDGATTAELDKLAI 94 Query: 64 KAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDY 123 AA++ + + P Y LA RL + K+ GQ + V E G + + Sbjct: 95 ATAAEMTATE-PQYSRLAGRLLAGVIDKEVRGQ-GIGSFSAAVRTGHEQGLIGDE-TAAF 151 Query: 124 TEEEFKQMDTFIDHDR----DMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 E ++D + + D F Y ++ + +YL+++ +T + ES Q+ + V+A Sbjct: 152 VAEHASRLDDAVYRAQAAHADWRFDYFGLRTVYDRYLLRHPLTRAVVESPQYWLMRVSAG 211 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG-DSLDSIN 238 L F++ +S+ +P + T Q SSC LI+ D LDSI Sbjct: 212 LSHTGEE------AVEFFELLSSLAYLPSSPTLFNSGTRHTQMSSCYLIDSPQDDLDSIY 265 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVR 298 + K GIG+ RIR+ G+ IRG G +P+ + +V + +QGG R Sbjct: 266 ERYHQVAKLSKFAGGIGLAFSRIRSRGALIRGTNGHSNGIVPWLRTLDASVAAVNQGGRR 325 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 GAA ++ WH +VE L L++N G + R +++ I R+ +L P Sbjct: 326 KGAACIYLEPWHPDVEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVEADGQWSLIDP 385 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 VP L D + F+ Y E+ + + V A L+ MM+ A TG+ ++ D Sbjct: 386 DAVPELPDLW---GPAFDAAYRAAEERGDVV-RTVSARYLYGRMMRTLAQTGQGWMTFKD 441 Query: 419 HCNT-----------HSPFDPAIAP---VRQSNLCLEIALPTKPLNDVNDENGEIALCTL 464 N D + P V SNLC EI T N E A+C L Sbjct: 442 ASNRACNQTSDDQTPRVAADGTVQPAPVVHLSNLCTEIIEVTS--------NDETAVCNL 493 Query: 465 SAFNLGAI---------------------NNLDELEELAILAVRALDALLDYQDYPIPAA 503 + NL A + D L LAV LD ++D YP A Sbjct: 494 GSVNLAAHLQWSDGTTGVRPTDPAARATGIDTDRLRSTVRLAVTYLDRVIDINYYPSEQA 553 Query: 504 KRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG 563 R +G+G + + A L+ + E IQ L+ S ELA++ G Sbjct: 554 AASNPRWRPIGLGSMGLQDVFFALRMPFDAPEAKELSTRIAEEIQLSALERSAELAEQFG 613 Query: 564 ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSE 623 A P F ET A+G L D + W A+R+ I HGLRNS + A+ P+ Sbjct: 614 AHPAFAETRAARGQLQHDLQGVEP------TQTERWAAVRQRIADHGLRNSLMIAIAPTA 667 Query: 624 TSSQISNATNGIEPPRGYVSIKASKDGILRQVV--------------------------- 656 T + I+ IEP + + + G QV Sbjct: 668 TIASIAGCYECIEPQVSNLFKRETLSGEFMQVNTALVGELKSLGLWTEAVREKLKADNGS 727 Query: 657 -----PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPM 711 E + WE+P +++ Q ++DQS S N + Sbjct: 728 VAGIADLPEETRRLFRTAWELP-QKALIEMAAARQAYVDQSQSLNLFMESPNI------- 779 Query: 712 QQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQ 742 +L L A+K G+KT YY +R Q Sbjct: 780 GKLSSMYLYAWKAGLKTTYYLRSRPATRIQQ 810 >UniRef50_D2E8G7 Ribonucleoside-diphosphate reductase n=1 Tax=Anguillid herpesvirus 1 RepID=D2E8G7_9VIRU Length = 833 Score = 682 bits (1759), Expect = 0.0, Method: Composition-based stats. Identities = 199/817 (24%), Positives = 329/817 (40%), Gaps = 108/817 (13%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHET 61 N V K G TE + K+ L+ + GL+ V + ++ + YDGI T ++ + Sbjct: 3 NFSVRKHSGRTEMWSTKKMLSKLESLSYGLNTDFVDLDRLVTATMDGLYDGITTKELDDV 62 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE 121 + + AA S DY LA R+ + + K G F A+ + M E + L Sbjct: 63 MARTAAGFTSYHF-DYSLLAGRIVVNSIHKYTVGNFLQGAVL--LQNMDETKPHVTDELV 119 Query: 122 DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF 181 + Q+ ID+ RD TF++ A++ LE YL++ V + E Q L++ +A + Sbjct: 120 AVARKYENQIQGAIDYSRDYTFNFFAIRTLERAYLLK--VNERVMERPQHLFMRIAIGIH 177 Query: 182 SNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSINAT 240 L+ V Y +S + S +P + T + +SC L+ DS+ I +T Sbjct: 178 G-----FDLESVLETYRCLSEKRFSHASPTLFHAGTNFAKLASCYLVTLADDSIAGIYST 232 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VRG 299 + GIG +RA GS I G +P + F + QGG R Sbjct: 233 LQECAQIAKCSGGIGAAISNVRAEGSAINSTNGTANGLVPMLRVFNAMTRMVDQGGNKRP 292 Query: 300 GAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPS 359 GA ++ WH ++ + L LK N G +G R R + YG+ I+ L R+ + +L P Sbjct: 293 GAMAVWLEPWHADIAAWLDLKKNLGDDGIRARDLFYGLWISDLFMERVKDDQMWSLMCPK 352 Query: 360 DVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDH 419 PGL D + +D F LYTKYE KQ V+A EL++ +++ + G ++ D Sbjct: 353 KCPGLMDVYGSD---FVALYTKYESQGMYVKQ-VEARELWTHILRSQMENGMPFMMYKDS 408 Query: 420 CNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG--------- 470 CN S + V+ NLC EI ++P A+C L+A L Sbjct: 409 CNRKSN-QQHVGVVKCGNLCTEIVEVSEPHRP--------AVCNLAAVCLPTCVACECGI 459 Query: 471 -------------------------AINNLDELEELAILAVRALDALLDYQDYPIPAAKR 505 + EL L + V+ L+ ++D DY A Sbjct: 460 RQASRTEVASSASSAVQACEDPTCRKSFDFGELGRLTEVLVKNLNRVIDKSDYAFDGANH 519 Query: 506 GAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGAC 565 R LGIGV A A G + A L + FE + Y+ + AS +LA+E Sbjct: 520 RNSQDRPLGIGVQGLADVFAMLGLAFDGTEAARLNVQIFETMYYHAMAASCKLAEEDQPY 579 Query: 566 PWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETS 625 P + + ++GI D + + +DW +L+ ++ +G+RNS L A MP+ ++ Sbjct: 580 PTYKGSPVSQGIFQFDMWGVKPSAM------HDWTSLKRRVQKYGVRNSLLLAPMPTAST 633 Query: 626 SQISNATNGIEPPRGYVSIKASKDGILRQVVPD--------------------------- 658 +QI EP + + G + + P Sbjct: 634 AQIFGNNEAFEPFTNNLFTRGVLSGDFQIINPHLVRELIRLGMWGEETRMRLMADNGSIR 693 Query: 659 -----YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQ 713 +H D ++ +WE+ + + FIDQS S N + + + Sbjct: 694 TWEDVPQHTRDVFKTVWEI-SQKTIINMAADRAPFIDQSQSLNIHMADPN-------VSK 745 Query: 714 LLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSI 749 L + ++ G+KT +YY +R Q + + Sbjct: 746 LSSMHMYGWQKGLKTGMYYLRSRPAVNAIQFTVDKTK 782 >UniRef50_C1VDU7 Ribonucleoside-diphosphate reductase n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VDU7_9EURY Length = 845 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 200/791 (25%), Positives = 324/791 (40%), Gaps = 77/791 (9%) Query: 13 STERINLDKIHRVLDWAAEGLHNVSISQVE----LRSHIQFYDGIKTSDIHETIIKAAAD 68 ST+ + + +L+ A G +V +V + YDG +++E + Sbjct: 3 STQTTQTNDVRTILNQARTGYEDVLTDEVMDRLVTETERNLYDGASIDEVYEALEGVTTA 62 Query: 69 LISRDAPDYQYLAARLAIFHLRKKAYG--------QFEPPALYDHVVKMVEMGKYDNHLL 120 I RD P Y+Y+AA + ++ G + +E G ++ L Sbjct: 63 RIERD-PAYKYVAADIHRRRYFRRVTGEQLSETADDDTATTYRETFAANLERGVDEDLLD 121 Query: 121 EDYTE--EEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 E + + ++ + +RD F Y A+ L +Y ++ V G+ E Q ++ VA Sbjct: 122 ERLLDGRFDIDELADALVLERDDKFDYIAMSTLTQRYFIKTEVDGDPLELPQAFWMRVAM 181 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSIN 238 L FYD +S + TP + T Q SSC L D L+ I Sbjct: 182 GLAIEEDDPQAR--ALEFYDVLSRLLFTPSTPTLFHSGTTHPQLSSCYLTTVEDDLEHIF 239 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVR 298 + + G+G + +RA G+ I TG +PF K + ++ G R Sbjct: 240 DSYKHHAQLSKWSGGLGNDWTNLRAEGALIESTGVESTGTVPFLKISNDVTAAINRSGKR 299 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 GAA + WH++ + L L+ N G E R M+ + L R+ E TLFSP Sbjct: 300 RGAACGYLEAWHMDFPAFLDLRRNTGDERRRTHDMNTAAWVPDLFMERVENDETWTLFSP 359 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIR-KQRVKAVELFSLMMQERASTGRIYIQNV 417 +VP L++ + + E R Y + + +R + V A +L+ M+ TG +I Sbjct: 360 DEVPELHETYGEEFAELYREYEEKAEAGELRQYETVDAADLWRTMLTRLFETGHPWITFK 419 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN---- 473 D CN SP D + V SNLC EI L T E A+C L + NL Sbjct: 420 DPCNVRSPQD-HVGTVHSSNLCTEITLNTS--------AEEHAVCNLGSVNLSNHVADSE 470 Query: 474 -NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYS 532 + + L + A R LD ++D YP A+ M R +G+GV+ F L + G + Sbjct: 471 LDREALADTIETATRMLDNVVDLCFYPTDEAEYSNMRHRPVGLGVMGFHDALMQVGTSMA 530 Query: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYK-----KDL 587 A ++ E + Y+ + S+ LAKE+GA F + + +GILP DT + Sbjct: 531 SEEAVEAANRWQEFVSYHTILNSSRLAKERGAYETFEGSKWDRGILPHDTVDRLEAERGR 590 Query: 588 DTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS 647 + + DW+ +R+ I HG+RNS A+ P+ T S I+ T IEP + +K++ Sbjct: 591 EIPTDRSETMDWDRVRDHIAEHGMRNSNTMAIAPTATISTINGTTPSIEPIYSNLYVKSN 650 Query: 648 K--------------------------------DGILRQVVPDYEHLHDAYELLWEMPGN 675 DG +++V E + + Y +E+ Sbjct: 651 MSGDFTVINEQLVDDLKAEGLWDDEMVDQIKFFDGSIQEVSAIPEEMRELYRSAFEIDPR 710 Query: 676 DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTR 735 L+L ++IDQSIS N + + L TA++ GVKT YY T Sbjct: 711 HQ-LRLTAHRGQWIDQSISHNVFFPSTD-------GSLLDDVYKTAWRLGVKTTYYLRTL 762 Query: 736 DGAEDAQDDLV 746 ++ + L Sbjct: 763 GASQIEKSTLD 773 >UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Bacteria RepID=B0RGP9_CLAMS Length = 834 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 189/800 (23%), Positives = 345/800 (43%), Gaps = 72/800 (9%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGL-HNVSI-SQVELRSHIQFYDGIKTSDIHET 61 ++ V KRDGS E + ++I+ ++ A +GL N+ +Q+ I +DGI T + E Sbjct: 2 SITVVKRDGSKEPYDANRINLAIEDATQGLDENIGWVTQIASELEITLFDGITTQQLDEA 61 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALY-----DHVVKMVEMGKYD 116 +I+ A + +D P + +AARL + + K+ G + P +H + ++ G + Sbjct: 62 VIQVALQNV-KDDPAFDTVAARLLLKTIYKRVLGDYSSPEELKRLHAEHFARNIQRGVDE 120 Query: 117 NHLLEDYTE-EEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYIL 175 L + + +++ ++ D Y V L +Y ++ R G+ E Q+ ++ Sbjct: 121 MLLDSRLVQLFDLERLAQALEPAHDELLKYIGVVTLNNRYGIKGR-NGDALEVPQYFWMR 179 Query: 176 VAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLD 235 +A L N T + FY+ +S + + T Q ++C ++E D ++ Sbjct: 180 IAMGLTLNEQNPT--ETAIAFYEKMSKLEYLAAGSTLVNAGTIYPQLANCFVMEMQDDIE 237 Query: 236 SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQG 295 I T+ ++ GIG++ ++RA GSPIR TG IPF + +++ S+G Sbjct: 238 HIAKTTRDVMWLTKGTGGIGLSVSKLRAQGSPIRSNNTTSTGPIPFMHTIDSVLRAVSRG 297 Query: 296 GVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITL 355 G + GA + WHL+ L L+ N G R R + V I+ R+ ED L Sbjct: 298 GKKFGALCFYMENWHLDFPEFLDLRQNSGDPYRRTRTANTAVWISDEFMKRVQNDEDWYL 357 Query: 356 FSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK-QRVKAVELFSLMMQERASTGRIYI 414 F P +V L + + E Y + IR +R+ A E F ++ +T ++ Sbjct: 358 FDPLEVSDLNELYGKAFSERYAFYVGEAEAGRIRMFKRINAREQFKSILISLQTTSHPWL 417 Query: 415 QNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN- 473 D N + + + SNLC EI LP + +++C L++ NL Sbjct: 418 TWKDTINNRA-LNNNTGTIHLSNLCTEITLPQ--------DEDNVSVCNLASINLSQHFA 468 Query: 474 ----NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGK 529 + ++E+ A LAVR LD L+D + A R +G+GV+ F + K G Sbjct: 469 DGKVDFAKIEQSARLAVRQLDNLIDITRSSVKEADFSNQQNRAVGLGVMGFTDIVEKLGF 528 Query: 530 RYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTY-----K 584 Y + +L + E + Y + S +LAKE+GA P F + +++G++P+D+ Sbjct: 529 SYESEESYDLIDEIMEHVSYAAIDESADLAKERGAYPNFEGSRWSEGLVPLDSIALMEAD 588 Query: 585 KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSI 644 + + N DW+ALR + G+RN+TL A+ P+ + ++ T G++P + Sbjct: 589 RGVPVKVNRTTRLDWDALRAKV-KGGMRNATLMAIAPTASIGLVAGTTPGLDPQFSQIFS 647 Query: 645 KASKDGILRQVVPD-------------------------------YEHLHDAYELLWEMP 673 +++ G +V + +H+ Y +++ Sbjct: 648 RSTSSGKFLEVNRNLVKDLQELGIWETVRENILRSQGDIQNIAAIPDHVKATYRTSFQLS 707 Query: 674 GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQN 733 +L++ QK+IDQ+IS N + ++ ++ GVKT YY + Sbjct: 708 PY-AFLEVAARAQKWIDQAISRNMYLETRDL-------GDMMDIYFAGWERGVKTTYYLH 759 Query: 734 TRDGAEDAQDDLVPSIQDDG 753 + Q + D Sbjct: 760 MKPRHTAEQSTVKVDKSQDA 779 >UniRef50_B7FY00 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillariophyta RepID=B7FY00_PHATR Length = 926 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 213/794 (26%), Positives = 338/794 (42%), Gaps = 99/794 (12%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHI--QFYDGIKTSDIHET 61 L V+KRDG E ++ K+ + L ++GL ++ V L I Y + T +I Sbjct: 66 TLHVSKRDGRLELLDSTKLLQRLTDLSDGLDMRFLNLVALTESIVRGMYPNVTTHEIDVL 125 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGK-YDNHLL 120 + AA L ++ PDY LAAR+ I K F + + + GK + +H + Sbjct: 126 AAETAASLGTQ-HPDYGRLAARILITQNHKTTPTCFS-----EAIETLYNSGKGFIDHKV 179 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 + ++D+ I H+RD+ +Y K LE YL++ ++ E Q+L + VA + Sbjct: 180 GELVRRRGPEIDSRIVHERDLEMTYFGYKTLERAYLLKKDNGNQVLERPQYLMMRVALGI 239 Query: 181 FSNYPRETR-----LQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSL 234 +R L+ YD +S + +P + T Q SSC L++ DS+ Sbjct: 240 HCTSKMSSRSEDDCLEAAFETYDLMSRGFFTHASPTLFHAGTTHPQLSSCFLVQMSEDSI 299 Query: 235 DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQ 294 + I T GIG++ IRA G+PI+G G +P + F + Q Sbjct: 300 NGIYDTLKRCAVISKAAGGIGLSVHNIRARGTPIQGTRGVSNGLVPMLRVFDVTSRYVDQ 359 Query: 295 GG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDI 353 GG R GA ++ WH ++ +L LK N G E R R + YG+ I L R+ + + Sbjct: 360 GGGKRPGAFAIYLEPWHADIFDVLSLKKNHGKEEQRARDLFYGLWIPDLFMKRVEEDDVW 419 Query: 354 TLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIY 413 +L P PGL + +FE LY YE++ +Q V+A EL+ +++ + TG Y Sbjct: 420 SLMCPHQCPGLAHCY---GAKFEALYQHYEQEGKFVRQ-VRARELWGAILESQIETGTPY 475 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL---- 469 + D CNT S I ++ SNLC EI + + E A+C L++ L Sbjct: 476 MLYKDTCNTKSN-QQNIGTIQCSNLCTEIIQYS--------DQEETAVCNLASICLPRFV 526 Query: 470 ---------------GAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLG 514 A + + L A + R L++++D YP+ AK R +G Sbjct: 527 VSERGTFGSISPESGSAFFDHEALHRAAKIVTRNLNSIIDVNSYPVDGAKTSNFKHRPIG 586 Query: 515 IGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYA 574 IGV A + G ++ +A L FE I + L+AS ELA+++G F + + Sbjct: 587 IGVSGLADAFLRLGLPFTSAAAKKLNEAIFETIYHAALEASAELAEKEGPYETFAGSPAS 646 Query: 575 KGILPIDTYKKDLDTIANEPL--------------------HYDWEALRESIKTHGLRNS 614 +G L + + D + YDWE+LR I GLRNS Sbjct: 647 QGKLQFNLWGLSDDETPSHKYALAKETPVPIQMYPNSSNVCGYDWESLRRRIVKTGLRNS 706 Query: 615 TLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPD-YEHLHDAYELLWEMP 673 A S + S +S T + +DG Q +PD + L + Y+ +WE+ Sbjct: 707 LSWA---STSVSSLSAQT---------FRNQMMRDGGSVQNIPDIPDRLKELYKTVWEIK 754 Query: 674 GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQ 732 D + + KFIDQ N N D +L A+K G+KT +YY Sbjct: 755 MKD-IIDMGADRGKFIDQ----NPNMD------------KLTAMHFYAWKKGLKTGMYYL 797 Query: 733 NTRDGAEDAQDDLV 746 T+ Q + Sbjct: 798 RTKPAVNAIQYTVE 811 >UniRef50_B0R7R5 Ribonucleoside-diphosphate reductase n=2 Tax=Halobacterium salinarum RepID=B0R7R5_HALS3 Length = 804 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 197/778 (25%), Positives = 318/778 (40%), Gaps = 66/778 (8%) Query: 22 IHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLA 81 + R L + + + + ++ + YD T + ++ ++ A I R P Y+ +A Sbjct: 16 LDRALTDHEDDIDSDARDRILTEATRNAYDDATTDERYDALLGALTGRIDR-HPAYKTVA 74 Query: 82 ARLAIFHLRKKAYGQFEPP----ALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDH 137 R+ L ++ ++P A ++ G + L E + + ++ I Sbjct: 75 GRVLRERLERRLVDDYDPATRDAATRQAFRDGIQRGLDADLLDERMGDYDLNRLADAITP 134 Query: 138 DRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFY 197 RD Y A+ L +Y ++ + +E Q ++ VA + R +Y FY Sbjct: 135 ARDDRLDYMAMDTLRQRYFLR-EPDADPFELPQPFWMRVAMGVALREDPADREEYAIEFY 193 Query: 198 DAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGIN 257 DA+ST + TP + T Q SSC L D LD I K G+G + Sbjct: 194 DALSTLRFVHSTPTLFHAGTTHAQLSSCYLTTVPDDLDGIFDAYKEHAKLSKWSGGLGND 253 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 +RA GS I TG +PF K + ++ G R GAA + WHL+ + Sbjct: 254 WTPLRAAGSLIESTGVESTGTVPFLKISNDVTAAINRSGKRRGAAAAYLACWHLDFPAFC 313 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFER 377 L+ N G E R M+ I L R+ + TLFSP + LY+ + +D E R Sbjct: 314 DLRRNTGDERRRTHDMNTAAWIPDLFMERVRADKQWTLFSPKETGDLYELYGSDFAERYR 373 Query: 378 LYTKYEKDDSI-RKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 Y D I R +RV A +L+ M+ TG ++ D CN SP D VR S Sbjct: 374 EYEAMADDGDIQRFERVDATDLWRTMLTRLFETGHPWLTFKDPCNVRSPQD-HAGTVRSS 432 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALDA 491 NLC EI L T E A+C L + NL + ++L E A+R LD Sbjct: 433 NLCTEITLNTSE--------EETAVCNLGSVNLARHLDDGDIDREQLSETVETAMRMLDN 484 Query: 492 LLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYL 551 ++D YP A+R M R +G+GV+ F L + + A + E + Y+ Sbjct: 485 VVDLNFYPTENAERSNMRHRPVGLGVMGFHDALQQMRVPMASDDALDRADALQEYVAYHA 544 Query: 552 LKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANE-----PLHYDWEALRESI 606 + AS +LA E+G + + + + + P DT + E DW +R+ + Sbjct: 545 IGASADLAAERGTYESYEGSKWDRDVFPQDTVDRLESERGREIPVPREERLDWSDVRQRV 604 Query: 607 KTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK------------------ 648 THG+RNS A+ P+ T S I+ T IEP + +K++ Sbjct: 605 ATHGMRNSNTMAVAPTATISTIAGTTPSIEPVYSNLYVKSNMSGDFTVVNDRLVADLEER 664 Query: 649 --------------DGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSIS 694 DG ++++ E + + Y +E+ L+L +IDQS S Sbjct: 665 DLWTEELRDKLTYHDGSVQELDAVPEDVQELYRTAFEIDPRHQ-LRLAARRGVWIDQSQS 723 Query: 695 ANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDD 752 N + + +L + TA++ G+KT YY T ++ + L DD Sbjct: 724 VNVFFPETD-------GSKLSEVYQTAWELGLKTTYYLRTLGASQIEKTTLDMDEYDD 774 >UniRef50_P74240 Ribonucleoside-diphosphate reductase subunit alpha n=12 Tax=Cyanobacteria RepID=RIR1_SYNY3 Length = 767 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 211/762 (27%), Positives = 351/762 (46%), Gaps = 39/762 (5%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETII 63 + V +RDGS+ +N+ KI V+DWA GL V+ +E + +GI T +I + +I Sbjct: 30 RIQVIRRDGSSTPLNIGKIRAVVDWACLGLE-VNSIALEAGLTTRLREGISTREIQDNLI 88 Query: 64 KAAADLISRDAPDYQYLAARLAIFHLRKKAY--GQFEPPALYDHVVKMVEMGKYDNHLLE 121 A ++ S + PD++Y+A RL ++ L K ++ V V G+YD+ +L Sbjct: 89 SCALEMCSPNEPDWRYVAGRLHVWSLWKDTLVRRGYQYGQYLRTVQTKVTNGEYDSRILT 148 Query: 122 DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF 181 Y+E E ++ +I+ D D + YA L +YL+ N E Q + A L Sbjct: 149 -YSEGELQEAGCWINSDWDTDYDYAGAVLLTSRYLLPN-------ELPQEALLTCALLLA 200 Query: 182 SNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATS 241 S + RLQ+ +RFY++++ +ISL TPI++ +R P +SC ++ D+L+SI Sbjct: 201 SVEAPDRRLQWARRFYESIAARRISLATPILANLRVPGGSLTSCFIVAMEDNLESIFGEI 260 Query: 242 SAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGA 301 + + G+G+N RIRA GS + G G IP+ K + +QGG R GA Sbjct: 261 TNAARISKNGGGVGVNVSRIRATGSWVMGKPNASGGVIPWTKLLNDTAIAVNQGGRRAGA 320 Query: 302 ATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDV 361 T+ +WHL+V L ++ G + + + + + R++ ED TL P +V Sbjct: 321 VTVGLDVWHLDVPEFLEMQAENGDQRRKAYDIFPQLILPDEFMRRVINKEDWTLVDPYEV 380 Query: 362 PGLYDAFFAD--QEEFERLYTKYEKD---DSIRKQRVKAVELFSLMMQERASTGRIYIQN 416 A+ E+FE Y + E + +R+ A ELF +M+ + TG Y+ Sbjct: 381 REKMGIELAELWGEQFEGAYREIESNLDTTITLYKRINARELFKQIMRTQVETGMPYLSF 440 Query: 417 VDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLD 476 D N +P + + + +NLC E P D + C L + NL + +L Sbjct: 441 KDTINKANP-NKHLGYIPGTNLCCESFSNVTPGQDAHC-------CNLVSLNLANL-DLQ 491 Query: 477 ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 ++ ++ +AVR LD ++ P AK RT+G+G + A +LAK Y + Sbjct: 492 DIAGVSQIAVRMLDNTIELTAPPFADAKSHNNKYRTIGVGAMGLADWLAKRRLNYDE--- 548 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 ++ FE I Y+ ++S ELAKE+GA P F + + KG+L A +P Sbjct: 549 LADINRLFEEIGYWCTQSSMELAKERGAYPAFPGSDWQKGLLIGSKPVSWFQANAAKPER 608 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV 656 WE L I+THG+RNS ++A+ P+ +SS + T I P G + Sbjct: 609 --WEKLSNDIQTHGIRNSHITAIAPNTSSSLVQGCTASILPVYSRFFYDKWAKGTVPIAP 666 Query: 657 PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDP------SRFPSGKVP 710 P + Y M ++ V +Q++ D IS ++ P + Sbjct: 667 PFIGNCFWFYPENKTM-DQRKVVKAVAAIQQWTDTGISMELLFNLNAGIYFPEEPERSLN 725 Query: 711 MQQLLKDLLTAYKFGVKTLYYQNT--RDGAEDAQDDLVPSIQ 750 + + L+ A++ G K +YY T +D +D+ D V Sbjct: 726 AKDIFDTLVMAWEAGCKAIYYIRTVQKDDFKDSSDGCVACAN 767 >UniRef50_C7NVI1 Ribonucleoside-diphosphate reductase n=2 Tax=Halobacteriaceae RepID=C7NVI1_HALUD Length = 815 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 200/787 (25%), Positives = 324/787 (41%), Gaps = 73/787 (9%) Query: 14 TERINLDKIHRVLDWAAEGLHNV---SISQVELRSHIQFYDGIKTSDIHETIIKAAADLI 70 D+I +LD A +G V + + Y G ++++E I+ + I Sbjct: 4 QTPTQTDRIASILDRATDGEPTVTESDRTALRRAIDENCYAGADRAEVYEAILGTLSARI 63 Query: 71 SRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDH-----VVKMVEMGKYDNHLLEDYTE 125 P Y+ +AAR+ + G+ D + +E G + L + Sbjct: 64 EAK-PAYKRVAARVFRQRYYHEVIGEDLTGTELDRAYRTIFRENIERGVATDLLDTRLVD 122 Query: 126 -EEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY 184 + + ++ +RD F Y A++ L +Y ++ GE E Q ++ VA L Sbjct: 123 RFDLDALAEYLAPERDEHFEYLAMETLYQRYFLRTN-DGEHLELPQAFWMRVAMGLAVEE 181 Query: 185 PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAI 244 K FYD +S + + TP + T Q SSC L D L+ I Sbjct: 182 DDPNAR--AKEFYDVLSKLEFTPSTPTLFHSGTTHPQLSSCYLTTVPDDLEGIFDAYKHH 239 Query: 245 VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL 304 + G+G + +RA G+ I TG +PF + + ++ G R GAA Sbjct: 240 AQLSKWSGGLGNDWTPLRAEGALIESTGVESTGVVPFLRISNDVTAAINRSGKRRGAACA 299 Query: 305 FYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGL 364 + +WHL+ + + LK G E R M+ I L R+ GE TLFSP +V L Sbjct: 300 YLAIWHLDFPAFVDLKRATGDERRRTPDMNTAAWIPDLFMERVQAGESWTLFSPDEVGDL 359 Query: 365 YDAFFADQEEFERLYTKYEKDDSIR-KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTH 423 ++A E R Y + ++ I + V+A EL+ ++ TG ++ D CN Sbjct: 360 HEATGEAFAEKYREYEQAAENGDIENFETVEAAELWRTLLTRLFETGHPWVTFKDPCNIG 419 Query: 424 SPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDEL 478 SP D +R SNLC EI L T E A+C L + N + D L Sbjct: 420 SPQD-HEGTIRSSNLCTEITLNTS--------TDEHAVCNLGSVNFATHMRDGELDRDYL 470 Query: 479 EELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 E+ A+R LD ++D YP A+ M R +G+G + F L + G + A Sbjct: 471 EDTVETAMRMLDNVVDLCFYPTEEAEDSNMRHRPVGLGTMGFHEALMEIGVPMNSNEAVE 530 Query: 539 LTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYK-----KDLDTIANE 593 ++ E + Y+ ++ S+ELA E+GA P F + + + ILP DT + + Sbjct: 531 KANRWQEFVAYHAIRTSSELAGERGAYPSFEGSKWDRDILPQDTVDLLEEERGREIPTER 590 Query: 594 PLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK----- 648 +W+A+R+SI HG+RNS A+ P+ T S I+ T IEP + +K++ Sbjct: 591 TETLEWDAVRKSIAEHGMRNSNTMAIAPTATVSTINGTTASIEPQYSNLYVKSNMSGDFT 650 Query: 649 ---------------------------DGILRQVVPDYEHLHDAYELLWEMPGNDGYLQL 681 DG ++++ E L + Y +E+ L+L Sbjct: 651 IVNDHLVADLRERDLWDDEMRDRIKYHDGSIQEIEAIPEDLRELYRGAFEIDPRHQ-LRL 709 Query: 682 VGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDA 741 Q +IDQS+S N + + L TA++ G+KT YY T ++ Sbjct: 710 TAHRQTWIDQSVSHNVFFPSTD-------GTLLDDIYTTAWELGLKTTYYLRTLGASQVE 762 Query: 742 QDDLVPS 748 + L S Sbjct: 763 KSTLDLS 769 >UniRef50_Q7T6Y8 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=RIR1_MIMIV Length = 881 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 190/783 (24%), Positives = 328/783 (41%), Gaps = 77/783 (9%) Query: 10 RDGSTERINLDKIHRVLDWAAEGLHNV--SISQVELRSHIQFYDGIKTSDIHETIIKAAA 67 +GS + I + I ++ E + I ++ + DI II A+ Sbjct: 74 HNGSIQVITSEIIRTYVEKIFEKMEVTHLDIDKMTKNIFPKLKSINTIKDIDNQIISTAS 133 Query: 68 DLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPA--LYDHVVKMVEMGKYDNHLLEDYTE 125 ++++ D DY +A + + +L F A LY++ + + + + ++ + Sbjct: 134 EMVT-DHYDYPKIAVWILMTNLHDNTSDDFLETAEKLYNNKSESNKNAPIISENIYNFIK 192 Query: 126 EEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP 185 + K+++ I +DRD + + LE YL R+ +I E Q L++ VA L Sbjct: 193 KHIKEINRVIRYDRDYNLTIFGFRTLEKSYL--KRINKKIVERPQHLFMRVAITLH---Y 247 Query: 186 RETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIV 245 R+ L + Y +S + TP + T Q SSC L+ GDSL+ I+ Sbjct: 248 RKNDLDRIFETYKYLSKGYFTHATPTLFNAGTTHEQLSSCFLLGIGDSLEEISECWKECA 307 Query: 246 KYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLF 305 GIGI+ IR G+ I + G + F + +QGG R G+ +F Sbjct: 308 LISKHAGGIGIHMTNIRVEGAYIASTQGEAGG-LRVLTIFNDISRYANQGGKRPGSFAIF 366 Query: 306 YPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLY 365 WH ++ L LK N G E R R + G+ IN + R+ K + +L PS P L Sbjct: 367 IEPWHGDIFFFLDLKKNTGAETERARDLFLGLMINDIFMERVYKDDVWSLMCPSQCPNLL 426 Query: 366 DAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP 425 + + +EF + Y KYE + I ++++A++L+ +M+ + TG Y+ D N S Sbjct: 427 NKY---GDEFTKEYLKYES-EGIYLKQIRAIDLWFKIMESQIETGVPYVMFKDAINDKSN 482 Query: 426 FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------NNLD 476 I V SNLC EI + N ++C LS+ L N Sbjct: 483 -QINIGVVNGSNLCCEIVEVSDKNN--------FSVCNLSSICLPRFVKIIDEVPTFNYQ 533 Query: 477 ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 +L +++ + R L+ ++D YP+ + + R +GIGV A A + A Sbjct: 534 KLFKISRILTRNLNNIIDINFYPLDKTRITNLRDRPIGIGVQGLADVFAMFKTPFDSEIA 593 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 +L K FE I Y L SN+LA+E G + + ++G D + D ++ Sbjct: 594 RDLNRKIFETIYYGALTESNKLAREFGTYQTYQGSPISQGKFQFDLWNFDKSQLSG---M 650 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK-------- 648 +DWE LR+ I HG+RNS ++ MP+ ++SQI IEP + +++ Sbjct: 651 WDWELLRQEILNHGVRNSLVTTCMPTASTSQIMGWNECIEPYTENIYSRSTMAGEYFVIN 710 Query: 649 ------------------------DGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGI 684 G + + +++ Y +WE+P +++ Sbjct: 711 KHLIKDLIELGVWNSEMVDLIKYYKGSVANIPNIPDNIKAIYRTVWEIP-QKSIIEMAAD 769 Query: 685 MQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQD 743 F+DQ+ S N D F +L L A++ G+KT +YY ++ + Q Sbjct: 770 RAPFVDQTQSMNLYIDKPSFA-------RLNSCLFYAWRKGLKTGMYYLRSKPASSANQF 822 Query: 744 DLV 746 + Sbjct: 823 GID 825 >UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Bacteria RepID=C8WK91_EGGLE Length = 845 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 183/726 (25%), Positives = 325/726 (44%), Gaps = 54/726 (7%) Query: 57 DIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQF---EPPALYDHVVKMVEMG 113 + ++KAA +L +++AP ++ +AARL + + + V + E G Sbjct: 149 QLLAMLVKAAVELTTQEAPRWEIIAARLLMVQFDRALAERLAARHIETFAQKVAFLTEEG 208 Query: 114 KYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLY 173 Y +++L+ YT E + FID R+ F+YA ++ L +Y+++ G ES Q ++ Sbjct: 209 LYGDYILQHYTPAELDEAAGFIDLSRNDLFTYAGLQLLLDRYVIRTH-QGAPLESPQEMF 267 Query: 174 ILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDS 233 + +A L R+ +V+RFYD +ST K+++ TP +S R P Q SSC + DS Sbjct: 268 LGIALHLAMEERASERMGWVRRFYDMLSTLKVTMATPTLSNARKPFHQLSSCFIDTVPDS 327 Query: 234 LDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCS 293 LD I + K G+G+ G++RA GS IRG + G I + + + Sbjct: 328 LDGIYRSIDNFAKVSKYGGGMGLYFGKVRASGSAIRGFDGAAGGVIRWIRLANDTAVAVD 387 Query: 294 QGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKG--E 351 Q G+R GA ++ WH ++ L L+ N G + + + V + + Sbjct: 388 QLGMRQGAVAVYLDAWHRDLPEFLALRTNNGDDRMKAHDVFPAVCYPDYFWQQARDNIEG 447 Query: 352 DITLFSPSDVPGLYDAFFAD--QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERAST 409 D L P ++ + D EE+ R Y + D I+K+ + ++ L+++ T Sbjct: 448 DWYLMCPHEILTVKGYALEDCYGEEWTRKYLECVADARIKKRAIPIKDVIRLIIKSAVET 507 Query: 410 GRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN---------------D 454 G + N D N +P + + SNLC EIA + + Sbjct: 508 GTPFTFNRDAVNRANP-NKHRGMIYCSNLCTEIAQNMGAIEQLEQRIEDVDGEQVVVTVT 566 Query: 455 ENGEIALCTLSAFNLGAI--NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRT 512 + G +C L++ +LG I ++ EL + AVRALD ++D +P+P A+ R Sbjct: 567 KPGAFVVCNLASLSLGHIDMDDPHELAHVTESAVRALDNVIDLNFFPVPYAEINNRQYRP 626 Query: 513 LGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETT 572 +G+GV + + LAK G R+ + F + Y ++AS +A+E+GA +F + Sbjct: 627 IGLGVSGYHHLLAKSGIRWESEEHLAFAERVFGDVHYAAVRASCAIAREKGAYGFFEGSG 686 Query: 573 YAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNAT 632 + G D W L + HGLRN L A+ P+ ++S I+ T Sbjct: 687 WQTGEYFRD----------RGLTDGRWAELARDVAEHGLRNGYLLAVAPTSSTSIIAGTT 736 Query: 633 NGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQS 692 G++P ++ K+G++ +V P+ Y + ++ G+ Q+ IDQ+ Sbjct: 737 AGLDPVMNRYFLEEKKNGLMPRVAPELSMDTFWYYKNAHLIDQTWSVRACGVRQRHIDQA 796 Query: 693 ISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDD 752 S N + + +++L L A++ GVKT+YY ++ S++ + Sbjct: 797 QSMNLYI------TNEYTFRRVLDLYLLAWEEGVKTIYYVRSK------------SLEVE 838 Query: 753 GCESGA 758 CE + Sbjct: 839 ECEVCS 844 >UniRef50_C9KMB2 Ribonucleoside-diphosphate reductase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB2_9FIRM Length = 755 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 189/751 (25%), Positives = 336/751 (44%), Gaps = 54/751 (7%) Query: 32 GLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRK 91 G H S + + + ++ ++ + +++AA +L S +AP + +AARL + Sbjct: 34 GEHAGDFSALVEKYEVFVKPSLQAAEKLQALVRAAVELASAEAPHWDKIAARLRYLVFAR 93 Query: 92 KAYGQFEPPALYDHVVKM---VEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAV 148 + + + V K+ G Y +++LE YTE E F+ +R+ ++YA + Sbjct: 94 QLSEDEARRGITNFVAKLRYLTAKGLYGSYILEHYTERELSAAARFMAEERNHLYTYAGL 153 Query: 149 KQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLP 208 L +Y++ G ES Q +Y+ +A L R+ +V+RFYD +S ++++ Sbjct: 154 DLLLSRYVIHTH-HGVALESPQEMYLGIALHLAMLELPAVRMDWVRRFYDMLSLQQVTMA 212 Query: 209 TPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPI 268 TP ++ R P Q SSC + DSL+ I + + K G+G+ G++RA G+ I Sbjct: 213 TPTLANARKPYHQLSSCFIDTVPDSLEGIYRSLDSFAKVSKWGGGMGLYFGKVRATGAAI 272 Query: 269 RGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGN 328 RG E G I + + + Q GVR GA ++ WH ++ L L+ N G + Sbjct: 273 RGFEGAAGGVIRWIRLVNDTAVAVDQLGVRQGACAVYLDAWHKDLPEFLQLRTNNGDDRM 332 Query: 329 RVRHMDYGVQINKLMYTRLLKGED--ITLFSPSDVPGLYDAFFAD--QEEFERLYTKYEK 384 + + V L + + D L P ++ + D EE+E+ Y Sbjct: 333 KAHDIFPAVCYPDLFWKLAKEDLDAPWFLMDPHEIEMVMGYALEDFWGEEWEKRYRACVA 392 Query: 385 DDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIAL 444 + I K+ + E+ L+++ TG + D N +P +P + SNLC EIA Sbjct: 393 EPRIDKRVISVKEIVRLILKSVVETGTPFAFYRDTVNRLNP-NPQAGMIYCSNLCTEIAQ 451 Query: 445 PTKPLNDVNDEN---------------GEIALCTLSAFNLGAIN--NLDELEELAILAVR 487 P+ V+ E G+ +C L++ NLG I+ + +EL + AVR Sbjct: 452 NMSPVEAVSTEIRTKDGDTVVQVTTRPGDFVVCNLASLNLGRIDVTSHEELRTVVRTAVR 511 Query: 488 ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 ALD ++D + P+ AK R++G+GV + + LAK+ R+ F I Sbjct: 512 ALDNVIDLNEAPLAYAKLTNAKYRSIGLGVSGYHHMLAKNAIRWESEEHLAFVDDVFARI 571 Query: 548 QYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 Y ++AS++LA E+G F + + G Y K ++ W+ L ++ Sbjct: 572 NYAAIEASSDLAAEKGTYGCFAGSDWQTG-----AYFKKRGYMSEA-----WQKLAAKVR 621 Query: 608 THGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYE 667 G+RN+ L A+ P+ ++S + T G++P ++ K IL ++ PD Y Sbjct: 622 AQGMRNAYLLAVAPTSSTSILVGTTAGVDPIMKRFFLEEKKGAILPRIAPDLSMKTYWYY 681 Query: 668 LLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK 727 + ++ G+ Q+ IDQ+ S N + +Q+L + AY+ GVK Sbjct: 682 KSAHTVDQNWSVRAAGVRQRHIDQAQSVNLYI------TNDFTFRQVLALYIRAYEEGVK 735 Query: 728 TLYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 T+YY ++ S++ + CES + Sbjct: 736 TIYYVRSK------------SLEVEECESCS 754 >UniRef50_B9L2K7 Ribonucleoside-diphosphate reductase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K7_THERP Length = 770 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 200/739 (27%), Positives = 320/739 (43%), Gaps = 66/739 (8%) Query: 56 SDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKY 115 +++ I+ L D P+ + AA L + + ++A P +H + VE G Sbjct: 20 AELDSRILSCLQQL--PDRPEAEREAAALLLEKIAREA-DDGTPLPYPEHFRRFVERGIA 76 Query: 116 DNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYIL 175 L + + +D RD YAA+ L +YLV++ T ++ E Q L++ Sbjct: 77 RGALDPRLRTFQLDVLARALDPARDALLGYAALATLADRYLVRDPETRQLLERPQALFMR 136 Query: 176 VAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLD 235 VA L P ETR + R+YD +S+ + TP + TP Q +SC L E DSL+ Sbjct: 137 VAMGLALVEPPETRTSWALRWYDLMSSLRYLPSTPTLFNAGTPHHQLASCYLAEVEDSLE 196 Query: 236 SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQG 295 SI ++ GIG RIRA G+P+RG G IPF + + S SQG Sbjct: 197 SILGSAYEFGMLAKYAGGIGTAVTRIRATGAPVRGINGTSGGLIPFLHLYDALIASISQG 256 Query: 296 GVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITL 355 G R G ++ WHLEVE+ L L+ N G R ++ + I R+ + L Sbjct: 257 GRRRGTMCVYLEPWHLEVEAFLDLRRNAGDPYRRTHQLNTALWIPDEFLRRVETDDLWYL 316 Query: 356 FSPSDVPGLYDAFFAD-QEEFERLYTKYEKD--DSIRKQRVKAVELFSLMMQERASTGRI 412 F P P L D A E + L + E +R+ A EL+ ++ TG Sbjct: 317 FDPIVAPELPDLVGAAFSERYRELCRQAEAGMLPRRAWRRLPARELWLAILASLMETGHP 376 Query: 413 YIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGA- 471 ++ D N S I + SNLC EI LPT E+A+C L + NL Sbjct: 377 WLTFKDAGNLRSQLR-GIGVIHSSNLCTEIFLPTS--------RDEVAVCNLGSVNLARH 427 Query: 472 -----INNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAK 526 + ++L LA+RALD ++D YP A R R +G+G++ FA LA+ Sbjct: 428 CTPTGELDWEQLAATVRLAMRALDNVIDANLYPSERAARANQLNRPVGLGLMGFAELLAR 487 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYK-- 584 Y++ +A +L + E + Y+ + AS LA+E+GA P F + +A G+LPIDT Sbjct: 488 RAVSYAEPAAADLADQIAEFLSYHAISASCALAEERGAFPNFAFSRWAAGVLPIDTLDEL 547 Query: 585 ---KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGY 641 + L + DWE LR+ ++ G+RN + A+ P+ T + ++ T ++P Sbjct: 548 AADRGLPVEVDRTRRLDWEPLRQRVRR-GMRNGAVMAVAPTATIALLAGTTPSLDPYYAN 606 Query: 642 VSIKASKDGILRQVVPD-------------------------------YEHLHDAYELLW 670 V + + G +V P L + + Sbjct: 607 VFSRQTLSGKFLEVNPILVEELRRRGLWEQLLPGLVAARGDLRAVPGCPPDLVARFPTAY 666 Query: 671 EMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLY 730 ++P + Y+++ +QK++D +S N + R Q+ L A++ G+K+ Y Sbjct: 667 QVPA-ESYIEVAARVQKWVDMGVSRNLYHAADRP-------GQMSAVYLAAWRKGLKSTY 718 Query: 731 YQNTRDGAEDAQDDLVPSI 749 Y R E Q + + Sbjct: 719 YCFVRPRMEIEQSTVAVNK 737 >UniRef50_A5TVY2 Ribonucleoside-diphosphate reductase n=15 Tax=Fusobacterium RepID=A5TVY2_FUSNP Length = 755 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 222/771 (28%), Positives = 366/771 (47%), Gaps = 43/771 (5%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAA 66 V RD E +N++KI L A EGL V++ ++E + + I T I ++I A Sbjct: 8 VINRDNIVEDLNIEKIREKLLRACEGLE-VNMVELESNIDSIYEENITTQKIQASLINTA 66 Query: 67 ADLISRDAPDYQYLAARLAIFHLRKKAYGQ--FEPPALYDHVVKMVEMGKYDNHLLEDYT 124 + + + D+ Y+A RL + ++ Y F + KMVE+G YD LL YT Sbjct: 67 VAMTTFEESDWSYVAGRLLMMEAEREVYHSRGFSYGDFSKTIRKMVELGLYDERLLS-YT 125 Query: 125 EEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY 184 EEE Q+ ID +RDM + YA +YL++ G+ YE Q ++ ++ L N Sbjct: 126 EEELNQIAQLIDVNRDMVYDYAGANMFVNRYLIK--YDGKTYELPQETFMAISMMLALNE 183 Query: 185 PR-ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSA 243 ETR++ VK FY+A+S K+SL TPI++ +R P SSC + D+++SI + Sbjct: 184 KAGETRVEIVKEFYNALSLRKLSLATPILANLRIPHGNLSSCFITAIDDNIESIFYNIDS 243 Query: 244 IVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAAT 303 I + G+G+N RIRA GS + G G +P+ + + +Q G R GA T Sbjct: 244 IARISKNGGGVGVNVSRIRAKGSMVNGYYNASGGVVPWIRIINDTAVAVNQQGRRAGAVT 303 Query: 304 LFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPG 363 + WHL++E+ L L+ G + + + V + L R+ E TL P ++ Sbjct: 304 VALDTWHLDIETFLELQTENGDQRGKAYDIYPQVVCSNLFMKRVKNNETWTLLDPYEIRK 363 Query: 364 LYDAFFAD--QEEFERLYTKYEKDDSIRKQRV-KAVELFSLMMQERASTGRIYIQNVDHC 420 Y + EFE LY K E D +I+ ++V A ELF +M+ + TG YI D Sbjct: 364 KYGIELCELYGYEFENLYEKIENDPNIKLKKVLSAKELFKSIMKTQLETGMPYIFFKDRA 423 Query: 421 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDEN-----------GEIALCTLSAFNL 469 N + + + + NLC+E KP + +E GEI C L + NL Sbjct: 424 NEVN-HNSHMGMIGNGNLCMESFSNFKPTINFVEEEEGNTSIRRSEMGEIHTCNLISINL 482 Query: 470 GAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGK 529 + + +ELE+ LAVRALD +D P+ + + + RT+G+G + A YLA+ Sbjct: 483 AELTS-EELEKHVALAVRALDNTIDLTVTPLKESNKHNLLYRTIGVGAMGLADYLAREYM 541 Query: 530 RYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDT 589 Y + N ++ FE I Y +KAS LAK++GA F + + +GI KK Sbjct: 542 IY--EESINEINELFERIALYSIKASALLAKDRGAYKAFKGSKWDQGIFYG---KKREWY 596 Query: 590 IANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD 649 N +W ++T+GLRN L+A+ P+ ++S + +T + P I+ ++ Sbjct: 597 DTNSKFKDEWNEAFYLVETNGLRNGELTAIAPNTSTSLLMGSTASVTPTFSRFFIEKNQR 656 Query: 650 GILRQVVPDYEHLHDAYELLWEMPGNDG--YLQLVGIMQKFIDQSISANTNYDPSRFPSG 707 G + + +HL D E + Y++++ + ++ Q +S +D + Sbjct: 657 GAIPRT---VKHLKDRAWFYPEFKNVNPISYVKIMAKIGSWVTQGVSMEMVFD----LNK 709 Query: 708 KVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 + + + L+TA++ G K++YY T Q + + CES + Sbjct: 710 DIKAKDIYDTLITAWEEGCKSVYYIRT------IQKNTNNISDKEECESCS 754 >UniRef50_C4V8X4 Ribonucleoside-diphosphate reductase n=1 Tax=Nosema ceranae BRL01 RepID=C4V8X4_NOSCE Length = 800 Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 173/784 (22%), Positives = 323/784 (41%), Gaps = 101/784 (12%) Query: 36 VSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYG 95 ++I + L+ D I + + A + ++ DY +A++ + +L++ Sbjct: 58 IAIDEYFLKIESGLCDDITVEEFISFAAETADSMTTK-HYDYGRFSAKILMEYLKENTLD 116 Query: 96 QFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKY 155 F + V + + G + + + + K +D +D+ +D +++Y A+ L+ Y Sbjct: 117 SF-----FAKVDYIYKNGDFYSEKFYNIVLDNKKFLDELVDYSKDDSWTYFAILTLKRAY 171 Query: 156 LVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGV 215 L+ + G+ E Q + + VA L + L+ VK Y+ +S + +P + Sbjct: 172 LLT--LDGQTIERPQDMLLRVAVQLHGD-----NLENVKETYELLSNNMYTHGSPTIFNS 224 Query: 216 RTPTRQFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAF 274 + Q +SC L+ ++++ + T V+ G+ ++ + A G+ IR Sbjct: 225 GSKKSQLASCFLLTPIEETVEGLFETVKRCVQISKSGGGVALDLHDMAAKGTSIRKTGGI 284 Query: 275 HTGCIPFYKHFQTAVKSCSQGGVRG-GAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHM 333 G IP+ + ++K Q G R G ++ WH ++ L L+ + G + R R + Sbjct: 285 SKGIIPYIQVLNWSLKYIGQAGSRRSGCPAIYLEPWHKDIFDFLDLRKSIGKDELRARDV 344 Query: 334 DYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRV 393 G+ IN L R+ ED +LF P VPGL +A+ +EFE +Y +YEK + V Sbjct: 345 FTGMWINDLFMKRVEANEDWSLFCPKSVPGLSNAY---GKEFEDMYLEYEK--KVDCVVV 399 Query: 394 KAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN 453 A +++ +++ + TG Y+ D N S I +R SNLC EI T P Sbjct: 400 PAQKVWKAIIESQIETGTPYMLYKDTINNLSN-QKNIGTIRCSNLCTEIVQYTSP----- 453 Query: 454 DENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAM 508 E+A+C L++ L + + + + + + + ++D YP+ A++ Sbjct: 454 ---DEVAVCNLASICLPKFVINGEFDFNLFKSVVKIVTKNANIVIDCNFYPLKEAEKSNK 510 Query: 509 GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWF 568 R +G+GV A Y A L + FE + + L++S E A++ G + Sbjct: 511 KHRPIGLGVQGLADVFLMLRLPYESEGARKLNKEIFETLYFGALESSCEEAEKYGPYESY 570 Query: 569 NETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 N + +KGI + ++ ++WE LR+ I +G+RNS L A MP+ +SQI Sbjct: 571 NGSPISKGIFHWEM------ANSSTTGRWNWEELRKKILKYGVRNSLLIAPMPTAGTSQI 624 Query: 629 SNATNGIEPPRGYVSIKASK--------------------------------DGILRQVV 656 N EP + + + +G ++ + Sbjct: 625 FNNNEAFEPFTSNIYTRRTACGEFQMVNRYLMNDLIKLNMWSPEIKNYIVEQEGSIQNIS 684 Query: 657 PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLK 716 E + + Y+ +WE+ + L Q F+DQ+ S N +P L Sbjct: 685 GIPEEIKELYKTVWEIKM-KCVIDLAADRQAFVDQTQSLNLFVAKPTYP-------ILSS 736 Query: 717 DLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSI--------------------QDDGCE 755 +K G+KT +YY TR + + + + D CE Sbjct: 737 MHFYGWKRGLKTGMYYLRTRPITSAIKFTVDLDMLKKVEKNEATNEELKENEINKSDICE 796 Query: 756 SGAC 759 S +C Sbjct: 797 SCSC 800 >UniRef50_B7SW23 Ribonucleoside-diphosphate reductase n=1 Tax=Spodoptera litura nucleopolyhedrovirus II RepID=B7SW23_9ABAC Length = 904 Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 180/777 (23%), Positives = 299/777 (38%), Gaps = 97/777 (12%) Query: 36 VSISQVELRSHIQFYD-GIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAY 94 V + ++ + + G+ + AA + + DY LA R+ + L K Sbjct: 170 VDVPKLMQKIKESINENGVSFEQMKLYCADVAASM-TYIHYDYALLAGRILVEDLHNKVC 228 Query: 95 GQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGK 154 F Y +V +H + + ++ I H+RD + Y K L Sbjct: 229 PCFVEVTNYLAQNNVV------SHEFNNLVVKHGALLNREIKHNRDYDYKYFGFKTLTNG 282 Query: 155 YLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSG 214 YL++ V I E Q + + VA + + + Y +S + +P + Sbjct: 283 YLLK--VNDVIAERPQHMLMRVALAIHGD-----DVMSAIETYQLMSLGTFTHASPTLFA 335 Query: 215 VRTPTRQFSSCVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEA 273 T Q SC L DS+D I T + G+G++ + A G Sbjct: 336 AGTCRPQMCSCFLQCIKEDSIDGIYKTLHESALISNLGGGLGLSVQSVSAQ----YNGTT 391 Query: 274 FHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHM 333 G + + F V+ QGG R GA + WH E+ +L L+ N G E + R + Sbjct: 392 KSGGLVSMLRVFNNMVRHVDQGGKRKGALAAYVEPWHPEIYDVLNLRRNMGSEDAKARDL 451 Query: 334 DYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRV 393 G+ I L R+ + ++ +LF P PGL D + FE LY KYEK+ + +++V Sbjct: 452 MLGLWIPDLFMERVKENKEWSLFCPKKYPGLLDEY---GSSFEILYEKYEKN-KLYERQV 507 Query: 394 KAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN 453 KA +LF +++ TG Y+ D CN S + ++ SNLC EI Sbjct: 508 KARDLFRFIVETNVETGGPYMLYKDPCNKFSN-QKNLGIIKCSNLCAEIVQYC------- 559 Query: 454 DENGEIALCTLSAFNLGAINNLDE-------LEELAILAVRALDALLDYQDYPIPAAKRG 506 + E A+C L++ + N+ L L + VR L+ ++D YP A Sbjct: 560 -DKDETAVCNLASIAVNKCVNVKTKTFDYVLLNRLTKIVVRNLNKIIDSNHYPTAGAANS 618 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 R +G+G+ A Y A ++ + E I + L+AS ELAK G Sbjct: 619 NKKHRPVGVGIQGLADAFVLLDIPYDSEEARSVNYMIAETIYFSALEASCELAKIDGPYE 678 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 + + +G + D Y I ++W LRE I+ HG+RNS L A MP+ T++ Sbjct: 679 SYENSPLFRGTMHYDNYN-----IYPTDHLWNWSKLREKIQRHGVRNSLLVAYMPTATTA 733 Query: 627 QISNATNGIEPPRGYVSIKAS--------------------------------KDGILRQ 654 QI EP V ++ ++G ++ Sbjct: 734 QILGNNESFEPFTSNVYLRRVLAGEFQVVNQYLIKALVDLNIYTPELRNKILAENGSVQN 793 Query: 655 VVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL 714 + +H+ D ++ WE+ + + FIDQS S N + + Sbjct: 794 IDEIPQHVKDLFKTAWEIKS-KCMIDMAADRAPFIDQSQSLNLFVAEPTY-------SVM 845 Query: 715 LKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLV----------PSIQDDGCESG-AC 759 ++ +KT +YY T+ A+ Q + + DDG E +C Sbjct: 846 SSIHFYTWQKQLKTGMYYLRTKPAAQATQFTVDAEAAASCGKKRKMDDDGTEECMSC 902 >UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alpha n=48 Tax=Bacteria RepID=RIR1_TREPA Length = 845 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 185/742 (24%), Positives = 341/742 (45%), Gaps = 47/742 (6%) Query: 22 IHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDI--HETIIKAAADLISRDAPDYQY 79 + VL + S L S + T + + +IKAA +L +++AP ++ Sbjct: 113 VLGVLKEIQQDFPFPEYSLDALASKFLLFKKEVTDERRSMQLLIKAAVELTAQEAPQWEL 172 Query: 80 LAARLAIFHLRK---KAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFID 136 +AARL + + + + Y+ + + E G Y ++ Y+ E ++ T+++ Sbjct: 173 IAARLLMLDFSLALGTSLEKLNIHSFYEKITYLEEAGLYGVYIRTHYSRAEIEEAATYLE 232 Query: 137 HDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRF 196 RD F+Y+++ + +Y+++ R E+ Q +++ +A L N ++ R+Q+VKRF Sbjct: 233 CSRDKLFTYSSLDMILRRYVIRTRAH-VPLETPQEMFLGIALHLAMNETQD-RMQWVKRF 290 Query: 197 YDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGI 256 Y +S ++++ TP +S R P Q SSC + DSLD I + + G+G+ Sbjct: 291 YTVLSKLQVTVATPTLSNARKPFHQLSSCFVDTVPDSLDGIYRSIDNFSQVSKFGGGMGL 350 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 G++RA+G+PIRG + G + + K + Q GVR G+ ++ +WH ++ Sbjct: 351 YFGKVRAVGAPIRGFQGAAGGILRWIKLANDTAVAVDQLGVRQGSVAVYLDVWHKDIPEF 410 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLK--GEDITLFSPSDVPGLYDAFFAD--Q 372 L L+ N G + + + V L + + G L P ++ + D Sbjct: 411 LQLRTNNGDDRMKAHDVFPAVCYPDLFWKTVRDNLGASWYLMCPHEILTVKGYALEDFYA 470 Query: 373 EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP 432 EE+E+ Y KD I K+ + EL L+++ TG + DH N +P + Sbjct: 471 EEWEKRYWDCVKDARISKRTIPIKELVRLVLKSVVETGTPFAFYRDHANRANP-NGHRGI 529 Query: 433 VRQSNLCLEIALPTKPLNDVN---------------DENGEIALCTLSAFNLGAIN--NL 475 + SNLC EIA +N V+ G+ +C L++ L I+ + Sbjct: 530 IYCSNLCTEIAQNMSAINLVSVKITEVDGQKVVVQTTRPGDFVVCNLASLVLSNIDLSDD 589 Query: 476 DELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGS 535 EL E+ +AVRALD ++D YP+P A+ R +G+GV + + LA+ G + Sbjct: 590 KELREVVRVAVRALDNVIDLTYYPVPYAQVTNAYYRAIGLGVSGYHHVLAQQGIDWESDE 649 Query: 536 ANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPL 595 + FE I ++AS +A+E+GA F + + G Y + ++ Sbjct: 650 HLAFADRIFERINRAAIEASMTIAREKGAYGCFTGSDWCTG-----AYFRKRGYVSE--- 701 Query: 596 HYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQV 655 DW+ L+ + THG+RN L A+ P+ ++S I+ T G++P ++ K ++ +V Sbjct: 702 --DWQRLQREVATHGMRNGYLLAVAPTSSTSIIAGTTAGVDPIMKQYFLEEKKGMLMPRV 759 Query: 656 VPDY-EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL 714 P + Y+ ++ G+ Q+ IDQ+ S N + ++Q+ Sbjct: 760 APSLSQKTCPLYKSA-HAVEQRWSIRAAGLRQRHIDQAQSVNLYI------TTDFTLKQV 812 Query: 715 LKDLLTAYKFGVKTLYYQNTRD 736 L + A++ G+K+LYY ++ Sbjct: 813 LDLYVYAWEVGMKSLYYVRSQS 834 >UniRef50_O12935 Ribonucleoside-diphosphate reductase n=1 Tax=Spodoptera exigua MNPV RepID=O12935_9ABAC Length = 770 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 172/789 (21%), Positives = 308/789 (39%), Gaps = 97/789 (12%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDI 58 ++ + + +E + L +L+ + + V + ++ + + D I I Sbjct: 9 IDSKFKIIPSNNVSENLTL-----LLNSLCKNIDTRYVDVPKLVHKVVAESGD-IGFDKI 62 Query: 59 HETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNH 118 AA + + DY LA R+ + L K F A + + Sbjct: 63 KLYCADVAASM-TYVHYDYALLAGRILVEDLHSKVSSCFVTIA-----NDLFSRNVLSDE 116 Query: 119 LLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 ++ ++ I H+RD + Y K L YL++ + I E Q + + VA Sbjct: 117 -FNQLVKKHGAILNNEIKHERDYNYKYFGFKTLTNGYLLK--IDDVIMERPQHMLMRVAL 173 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSI 237 + + ++ V Y +S + +P + T +Q SC L DS+D I Sbjct: 174 AIHGD-----DVKSVIETYQLMSLGTFTHASPTLFSAGTRRQQMCSCFLQSIKDDSVDGI 228 Query: 238 NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV 297 T + G+G++ + +G + + F V+ QGG Sbjct: 229 YKTLHESALISNLGGGLGLS----------AQNSGG--SGLVNMLRVFNNMVRHVDQGGK 276 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R GA + WH E+ L L+ N G E + R + G+ I L R+ + +LFS Sbjct: 277 RKGALAAYIEPWHPEIYEFLNLRRNMGSEDTKARDLMLGLWIPDLFMKRVKNNQMWSLFS 336 Query: 358 PSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417 P L D + D FE Y YE + + +++VKA +LF +++ TG Y+ Sbjct: 337 HKTCPDLADKYGFD---FEMRYCDYE-NAQVYERQVKARDLFRFIVETNVETGGPYMLYK 392 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDE 477 DHCN S + ++ SNLC EI + E A+C L++ + ++D Sbjct: 393 DHCNNFSN-QKNLGTIKCSNLCAEIVQYC--------DENETAVCNLASIAVNKCVDVDA 443 Query: 478 -------LEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530 L+ L + VR L+ ++D YP ++R R +G+G+ A Sbjct: 444 KTFDYVLLKHLTKIIVRNLNKIIDVNHYPTAESERSNKKHRPIGVGIQGLADAFVLLDIA 503 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTI 590 Y A + + E I + L+AS ELAK G + ++ ++GIL Y D + + Sbjct: 504 YDSDDARFVNYSIAETIYFAALEASCELAKINGPYESYTDSPVSRGILHFHNYD-DENGV 562 Query: 591 ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS--- 647 + +DW L+ +I +G+RNS L A MP+ T++QI EP V ++ Sbjct: 563 YHSNNLWDWNELQCNINKYGVRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAG 622 Query: 648 -----------------------------KDGILRQVVPDYEHLHDAYELLWEMPGNDGY 678 ++G ++ + +H+ + ++ WE+ Sbjct: 623 EFQVVNQYLVKALIDLDIYTPELRNKILAENGSVQNIDEIPQHVKNLFKTAWEIKS-KCI 681 Query: 679 LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDG 737 + + FIDQS S N + + A++ +KT +YY T+ Sbjct: 682 INMAADRAPFIDQSQSLNLFVAEPTY-------SVVSSIHFYAWEKKLKTGMYYLRTKPA 734 Query: 738 AEDAQDDLV 746 A+ + + Sbjct: 735 AQATKFTVD 743 >UniRef50_B7XJ88 Ribonucleoside-diphosphate reductase n=2 Tax=Enterocytozoon bieneusi H348 RepID=B7XJ88_ENTBH Length = 778 Score = 630 bits (1624), Expect = e-179, Method: Composition-based stats. Identities = 181/774 (23%), Positives = 324/774 (41%), Gaps = 101/774 (13%) Query: 52 GIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVE 111 + +++ + + AA +I+ P Y LAA + I HL + + F +Y K + Sbjct: 40 DMTPTEMTKYCSEIAATMITI-HPSYNKLAAIILIKHLHENTFNTFSDKMMYIQQEKNI- 97 Query: 112 MGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQF 171 +D+H++E ++ + ++RD F Y A+ L+ Y +Q V + E Q Sbjct: 98 ---FDDHIMELII-NNMNVYNSIVKYERDYNFDYFALISLQKSYQIQ--VNNTVIERPQD 151 Query: 172 LYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG 231 +Y+ VA L + V++ YD +S + TP + Q +SC L+ Sbjct: 152 IYMRVAIELHGD-----DFNNVQKTYDLLSQQYYTHATPTLYNSCFKKNQLASCFLLGMK 206 Query: 232 -DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVK 290 D++ I T Y G+G++ +R S + + G IP K ++K Sbjct: 207 SDTIAGIFDTIKEAAIYSKLSGGVGLHISNLRCDKSQLVTTGGYSKGIIPIVKLINDSMK 266 Query: 291 SCSQGGVRGGA-ATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLK 349 +QGG R A + WH ++ L L+ N G+E R R + IN L R+ K Sbjct: 267 YINQGGARRCATCAFYLEPWHKDILKFLDLRKNTGIEEERARDSFTALWINDLFMERVEK 326 Query: 350 GEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERAST 409 E +LF P+ GL D + ++F +LY YE ++I + + A +L+ ++ + T Sbjct: 327 NEMWSLFDPNIAKGLQDVW---GDQFNKLYAYYE--ETIERTTIPAQKLWKEIICSQIET 381 Query: 410 GRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL 469 G Y+ D CN +S I ++ SNLC EI + ++ A+C L++ L Sbjct: 382 GTPYMCYKDTCNRYSN-QNNIGTIKSSNLCAEIIQYS--------DSDITAVCNLASICL 432 Query: 470 GAI-----------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVI 518 + EL + + ++ ++D +P +K+G R +GIGV Sbjct: 433 PKYVKINSTTSNYYFDFQELYTVVKIVTYNMNKMIDKSAFPTEESKKGNSLFRPIGIGVQ 492 Query: 519 NFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGIL 578 A G + A +L FE + + L+AS ELA++ G ++ + Y++GI Sbjct: 493 GLADVFFLMGYSFESKEARDLNKMIFETLYFGALEASCELAQKHGPYSYYQGSMYSQGIF 552 Query: 579 PIDTYKKDLDTIANE-PLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637 + + + + ++WE LR +KT+G+RNS ALMP+ ++SQI + IEP Sbjct: 553 HFEKFCEGRINVNEILSGMWNWEELRIKMKTYGVRNSLTLALMPTASTSQICGNSECIEP 612 Query: 638 PRGYVSIKAS--------------------------------KDGILRQVVPDYEHLHDA 665 + + + + +G ++++ +H+ D Sbjct: 613 IQSNIFTRRTFAGEFQIVNKYLMKDLIKLGLWNNEIKQLIIEYEGSIQKIPIIPQHVKDL 672 Query: 666 YELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFG 725 Y+ +WE+ L + Q F+DQS S N + L +K Sbjct: 673 YKTVWELKM-KSVLDMAIDRQAFVDQSQSLNLFVKEPTY-------GILSSMHFYGWKNK 724 Query: 726 VKT-LYYQN-------------------TRDGAEDAQDDLVPSIQDDGCESGAC 759 +KT +YY T +D+++D + ++D CE +C Sbjct: 725 LKTGMYYLRTCPLAKAIKFTVDKELILKTLSSFKDSENDKKLNKENDYCEGCSC 778 >UniRef50_Q2P8D3 Ribonucleoside-diphosphate reductase n=66 Tax=root RepID=Q2P8D3_XANOM Length = 832 Score = 623 bits (1608), Expect = e-177, Method: Composition-based stats. Identities = 189/781 (24%), Positives = 333/781 (42%), Gaps = 64/781 (8%) Query: 2 NQNLLVTKRDG-STERINLDKIHRVLDWAAEGLHNVSISQVELRSH--IQFYDGIKTSDI 58 N + +TK G +++ R +D + ++ + ++ D + D+ Sbjct: 59 NVSTWITKEAGNRKIPFEPERLERAIDQIHAEFPQLDVADYKRSVFGFVERKDSVNADDL 118 Query: 59 HETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQ--FEPPALYDHVVKMVE----M 112 + +I+ A + P++++ AARL + L K+A ++ Y V + E Sbjct: 119 VDHLIREAEARVDLTTPEWEHFAARLYLRRLYKRASRNRFYDASQKYGSFVGLQESLADR 178 Query: 113 GKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFL 172 Y N +L Y+++E + I+ +RD F+Y + L +YL + G ++E Q Sbjct: 179 NVYSNDILRRYSKDELIEAGKMIEPERDKLFAYNGLYLLATRYLATDSSRG-VFELPQER 237 Query: 173 YILVAACLFSNY------PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCV 226 ++ +A L + RE R+Q V Y A+S +++ TP ++ Q SSC Sbjct: 238 WLTIALYLMQDEIGTGKGSRERRMQLVGEAYWALSNLYMTVATPTLANAGKVGGQLSSCF 297 Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ 286 + DSL I +++ + + G+G G +R+ GS IRG G +P+ K Sbjct: 298 IDTVDDSLQGIYDSNTDVARVSKHGGGVGAYLGYVRSSGSAIRGVSNSSGGVVPWIKQLN 357 Query: 287 TAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR 346 S Q G R GA ++ ++H ++E+ L L+ N G + R + V I L Sbjct: 358 NTAVSVDQLGQRKGAIAVYLDIFHRDIEAFLDLRLNNGDQRLRAHDVFTSVCIPDLFMEA 417 Query: 347 LLKGEDITLFSPSDVPGLYDAFFADQEE---------FERLYTKYEKDDSIRKQRVKAVE 397 + + D LF P +V + + D + F R Y + D+ I ++ VKA+E Sbjct: 418 VERRGDWYLFDPHEVKRVKGWYLQDFYDEKKGDANSSFRRKYEEVVADERITRKTVKAIE 477 Query: 398 LFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND--- 454 +F +M + TG ++ D N +P + V SNLC EI P + + Sbjct: 478 IFKRIMVSQLETGNPFMFYRDEVNRKNP-NKHEGMVYSSNLCTEILQNMSPTRMMQEIIS 536 Query: 455 --------ENGEIALCTLSAFNLGAINNL----------DELEELAILAVRALDALLDYQ 496 + G+ +C LS+ NLG + D LE L + VR LD ++D Sbjct: 537 GNQIVTTKKAGDFVVCNLSSINLGRAITVQADQADLLGADVLERLIPIQVRMLDNVIDLN 596 Query: 497 DYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASN 556 P+P A R +G+G + + LA+ ++ A + + + +E I Y ++AS Sbjct: 597 QLPVPQATITNQKYRAIGLGTFGWHHLLAQKAIHWNAKEAEDYSDELYERINYLTIQASM 656 Query: 557 ELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTL 616 ELAKE+G F + + G Y + D + + W L + +G+RN+ + Sbjct: 657 ELAKEKGTYSVFRGSDWHNGE-----YFRARDYNSPQ-----WLELSAQVAVNGVRNAWM 706 Query: 617 SALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE-HLHDAYELLWEMPGN 675 A+ P+ +++QI+ +T I+P + KD P YE Sbjct: 707 LAVAPNMSTAQIAGSTASIDPIYSAFYYEEKKDFRRPVAAPGLSLDTWPYYEKGAYKVDQ 766 Query: 676 DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTR 735 ++ Q+ +DQSIS N + LL +TA++ G+KT YY + Sbjct: 767 FASVRQNARRQRHVDQSISFNFYVP------STIRASTLLDLHMTAWREGLKTTYYVRSN 820 Query: 736 D 736 D Sbjct: 821 D 821 >UniRef50_B3RGP4 Ribonucleoside triphosphate reductase alpha chain n=5 Tax=unclassified Myoviridae RepID=B3RGP4_9CAUD Length = 771 Score = 616 bits (1589), Expect = e-175, Method: Composition-based stats. Identities = 256/781 (32%), Positives = 413/781 (52%), Gaps = 44/781 (5%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAA 66 V K +G + +++++ + +G N + S + L ++ + YDG T ++++ II + Sbjct: 5 VIKSNGCEVAFDPERLNKAAIFGDDG--NGNWSHIALDAYKRLYDGCTTKEVNQAIIDSC 62 Query: 67 ADLISRDAPDYQYLAARLAIFHLRKKAYGQFEP-PALYDHVVKMVEMGKYDNHLLEDYTE 125 +SR ++ +A R+ I + K+A+G F P+L MVE G +++ Y+ Sbjct: 63 ---VSRKDEEHSRMAGRVLIGQIYKEAFGGFTKIPSLPSFYNTMVEKGYWEDM---GYSF 116 Query: 126 EEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP 185 E +D IDH +D+ + YA +KQ KY +++ + ++ES Q +++ +A + N P Sbjct: 117 TELNTLDAVIDHSKDLGYGYAVLKQFRDKYGIKDTLKDTLFESPQMMFMGIAMAVMKNMP 176 Query: 186 RETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIV 245 +E R+ V + Y +S KI+ PTP ++G+RT ++SC +I+ D+ SI Sbjct: 177 KERRINDVVKLYTYLSDLKINAPTPYLNGLRTGKTGYASCCVIKADDTAKSIGVAREVAY 236 Query: 246 KYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLF 305 +AGIG R+ G +RG H G IP+Y+ VK Q RGG+AT+ Sbjct: 237 TMTVNQAGIGYYLSS-RSAGDGVRGNTIKHMGKIPYYRGIDAGVKENRQQS-RGGSATVS 294 Query: 306 YPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLY 365 + +++ L+ L+N V R+ MDY + IN+ R+ K D L S P L+ Sbjct: 295 FLALDPQIDELIRLRNPMTVASKRINTMDYSIGINRSFINRVAKNLDWMLVSYKHAPQLH 354 Query: 366 DA-FFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS 424 + F EEF+ + KDDSI K ++A +L ++ +R GR+++ D N H+ Sbjct: 355 EGIFTMSMEEFDAEVDRIAKDDSIPKTWIRARDLAVELLTQRIEVGRLFVYWTDEMNRHT 414 Query: 425 PFDPAIAPVRQSNLCLEIALPTKPLNDVND------ENGEIALCTLSAFNLGAINNLDEL 478 PF + SNLC EIALPTK +D+ + ++GE+ALC LS+ G +E Sbjct: 415 PFKD---VIYSSNLCAEIALPTKGYSDMRNIFKHDVDDGEVALCFLSSLVAGR-VTPEEY 470 Query: 479 EELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 E++A V +D +++ YP + RR++G+G+ N A+++A H Y + Sbjct: 471 EDVAYYTVLMIDNVMEIMTYPYENMESTVKKRRSIGVGLTNVAHFIASHKVTYGSPESKQ 530 Query: 539 LTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP-LHY 597 L H E Y L KAS LAKE+G C W ++T Y +G LPIDTY K++D++ +P L Sbjct: 531 LVHDLAELHSYSLHKASLRLAKERGVCEWMHKTKYPEGWLPIDTYNKEVDSVVKDPSLKQ 590 Query: 598 DWEALRESIKTH-GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV 656 DWE LR+ I + GLRNS L A MP+E+SS +N TNG+ P R ++ K S G + +V Sbjct: 591 DWEGLRKEIIENGGLRNSVLEAYMPNESSSLATNTTNGVYPVREHIIFKKSPQGQVLFIV 650 Query: 657 PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLK 716 PDY+ L + Y W++ ND + + ++QKF Q+ISA+ D ++ GK+ M++ L Sbjct: 651 PDYDELKEYYTSAWDVDTND-MIDMYAVIQKFTGQAISADLYIDYTKLKDGKISMKEQLG 709 Query: 717 DLLTAYKFGVKTLYYQNTRDGAEDAQDDL-------------------VPSIQDDGCESG 757 L+ A KFG+KT YY N+R GA D+ + S++D CES Sbjct: 710 YLIRATKFGMKTWYYLNSRVGAGDSLAEELHAKKQAEDETRKNYPLIADSSVEDPYCESC 769 Query: 758 A 758 A Sbjct: 770 A 770 >UniRef50_A2PYM5 Ribonucleoside-diphosphate reductase n=4 Tax=Myoviridae RepID=A2PYM5_9CAUD Length = 742 Score = 612 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 205/772 (26%), Positives = 344/772 (44%), Gaps = 50/772 (6%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETII 63 + V DGS + ++ V++WA EGL V ++ R +F I T +I +I Sbjct: 2 QINVIHTDGSRTPYDANRAIEVINWACEGLE-VDPDKLSRRLSRRFNADITTEEIQNGLI 60 Query: 64 KAAADLISRDAPDYQYLAARLAIFHLRKK--AYGQFEPPALYDHVVKMVEMGKYDNHL-- 119 + AA+L PD+ ++ RL ++ R+K A + + G Y+ L Sbjct: 61 RTAAELADLQYPDWLKVSGRLRMWDWRRKVKARRGYLYGNYPVAFEYLRSEGLYEGDLIK 120 Query: 120 --LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 L+ Y+ ++ + T+ID +RDM F + L +YL++ E Q +++ A Sbjct: 121 KFLDTYSADDIAEAGTWIDPERDMRFDISGADLLTARYLLEG-------ELLQEMWLTQA 173 Query: 178 ACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI 237 L P R+ + + YD +S KISL TP+MS +R SSC +I+ DS +SI Sbjct: 174 LLLSMLEPAHERMTFAHKAYDLLSLGKISLATPLMSNLRQADGSLSSCHIIDIDDSRESI 233 Query: 238 NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV 297 S + + G+G+ ++RA GS IR + G P+ K + + +Q GV Sbjct: 234 FDNISQLAAMSANGGGVGVRISKVRARGSRIRKKKGASGGVCPWIKIINATIVATNQRGV 293 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R GA T+ +WH ++ + L+ + G E + R + I+ R++ +D L Sbjct: 294 RAGACTVGIDVWHADLLEYMDLRGDAGSEHTKARDILLQFIISDEFMRRVILDKDWYLVC 353 Query: 358 PSDVPGLYDAFFAD--QEEFERLYTKYE------KDDSIRKQRVKAVELFSLMMQERAST 409 P+++ ++ AD +EF Y E ++V A ++ M+ T Sbjct: 354 PTEIKNVFGYQLADMYGDEFTNAYHVIEAYINSSAPPLDVVKKVSAKAIWKKMLMLLLET 413 Query: 410 GRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLE-IALPTKPLNDVNDENGEIALCTLSAFN 468 G Y+ D N +P + + NLC+E +L + C L + Sbjct: 414 GTPYVAFKDRINALNP-NKHEGIIGGVNLCVESYSLFNSSYSHC---------CMLLSLV 463 Query: 469 LGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHG 528 L I + DE+ +++ AVR LDA D P P A+ RT+G+GV+ A +LA Sbjct: 464 LPRIAD-DEMADVSRTAVRLLDAACDLTTSPTPEARAHVNRYRTIGVGVMGLADWLAIRH 522 Query: 529 KRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLD 588 RY D NL K FE I +Y +AS ELA+E+GA P F + ++KG++ K+ + Sbjct: 523 LRYQD---LNLIEKLFEDICFYTTQASVELAEERGAYPAFPGSEWSKGLILGGRDKEWVR 579 Query: 589 TIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 + +P W AL E I G+RNS + A P+ ++S + AT P ++I + Sbjct: 580 DNSTDPER--WYALMERIIVSGIRNSHILATAPNSSTSLVQGATASFLPVFSRLTIDKNG 637 Query: 649 DGILRQVVPDYEH-LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANT--NYDPSRFP 705 GI V + H E + P + +QK++D +S N++ + Sbjct: 638 AGINTIVPLYIKEAFHFYQESRYTHPSV--VVSAAATIQKWVDTGLSTELLFNFNEHAYG 695 Query: 706 SGKV-PMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCES 756 V + L + A++ G+KT+YY + QD + + C S Sbjct: 696 FDYVATAKDLNDVYMQAWREGLKTVYYVRSM-----WQDTVTEKSECHSCAS 742 >UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Brachyspira RepID=C0QY27_BRAHW Length = 773 Score = 610 bits (1572), Expect = e-173, Method: Composition-based stats. Identities = 229/793 (28%), Positives = 388/793 (48%), Gaps = 64/793 (8%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETI 62 + ++ KRDG E N +K+ +V+DWA EG +Q+ +I+ D +K +++ + Sbjct: 8 KKHIIIKRDGREEPFNEEKLRKVIDWATEGKEA-FTNQLLEGLNIKINDKMKIEVLYDEL 66 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQ---FEPPALYDHVVKMVEMGKYDNHL 119 I A ++IS P Y +A +L + + K+ G P + + + K ++ YD + Sbjct: 67 INTAVNMISPLYPMYDTIAEKLYLMKIYKETCGLKKIGSYPHIKNFLKKGIKYKIYDKDI 126 Query: 120 LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 ++ +T++E ++++ ID +RD+ F+Y + KY + + E Q Y++ A Sbjct: 127 IQLFTDKELDKINSMIDPNRDLLFTYKGLAIFYKKYC--KNIGNKKLELPQITYMVAAMF 184 Query: 180 LFSNY------------PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVL 227 F + + RL+Y+KR YD +S +++ TP ++ T Q +SC+L Sbjct: 185 SFYDDYYKGENKDKLEISKSERLKYIKRTYDMLSRHEVTFATPRIANSMTIKAQLASCIL 244 Query: 228 IECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQT 287 D S+N T + Y GI +A IRA GS I+ G IPF K + Sbjct: 245 NTPADDTWSLNQTDGNMALYSKFSGGIAYDASYIRASGSTIQTNRGRSDGPIPFIKRVEQ 304 Query: 288 AVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRL 347 + S +QGGVR GA + +P WHL+V L++LK+ G E R R + Y ++I+ + R+ Sbjct: 305 TISSFNQGGVRKGACVVTFPWWHLDVLDLIMLKDAGGTEDTRARKLVYSIRISNIFRERV 364 Query: 348 LKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERA 407 K +TLF P + P L + + E+F Y YE SIRK+++KA +L +++ R Sbjct: 365 NKDGYVTLFDPKETPLLNEEY---GEKFNVAYIYYESKSSIRKKKIKAKDLLFQILKVRQ 421 Query: 408 STGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND------------- 454 TG +Y+ VD+ N + + + SNLC EI +P+ P + + Sbjct: 422 ETGNLYLTFVDNINEQNMVNRFVG---ASNLCQEIVIPSYPSKLIKEKYVINEDGEYEII 478 Query: 455 ---ENGEIALCTLSAFNLGAINNL--DELEELAILAVRALDALLDYQDYPIPAAKRGAMG 509 ++GEI +C L + NL + N ++ + +R D ++D Q YP+ + Sbjct: 479 QRKKSGEIGICNLVSVNLMSWVNFSPEKKKSFCYTLLRGCDNIIDTQFYPVKEGEIANKK 538 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 R +GIGVIN+A LA + +Y+D A T+K F+ + Y++ +ASN LA+E+G FN Sbjct: 539 NRPIGIGVINYANLLASNKIKYTDKEALEFTNKVFDDLYYHIYEASNILARERGPYKTFN 598 Query: 570 ETTYAKGILPIDTYKKDLDTIANEPLHYD---WEALRESIKTHGLRNSTLSALMPSETSS 626 E+ + +G+ P + + N + D W+ L E+IK +G+R S A+ P+ TS Sbjct: 599 ESKWKEGLTPFHISLLNNNKKNNLNVSVDKEKWDKLAENIKNNGVRFSFHGAIAPTATSG 658 Query: 627 QISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQ 686 + +AT IEP I+ L +VP+ + + YE W +P ++L + Q Sbjct: 659 KSVSATESIEPIVDLFFIEEGIQ-TLPSLVPNIKKNREYYERCWNIPA-KTIIELAAVRQ 716 Query: 687 KFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLV 746 ++IDQS S N Y ++L D+ A G+KTLYY T Sbjct: 717 RYIDQSQSLNLYYVKPD------SAKELWDDIQYAMDLGLKTLYYMKT----------PK 760 Query: 747 PSIQ-DDGCESGA 758 + + ++ CES Sbjct: 761 SNFELEEVCESCT 773 >UniRef50_B2V806 Ribonucleoside-diphosphate reductase n=2 Tax=Aquificales RepID=B2V806_SULSY Length = 850 Score = 604 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 169/824 (20%), Positives = 331/824 (40%), Gaps = 108/824 (13%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVS----ISQVELRSHIQFYDGIKTSD 57 ++N +V KRDG+ E+ + K+ + EGL + ++ ++ + + T + Sbjct: 4 HKNRIVVKRDGTQEKFQMKKLVDAIFALLEGLDLPDDYEIVFKITKELDLKIPEVVTTEE 63 Query: 58 IHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDN 117 + ++KA LI + Y +A R + + ++ +F + D++ V Sbjct: 64 LDYLVLKAIEHLIPTGSI-YDTIATRQLLKIINRRIERRFS--SFKDYINYAVNEKLLKP 120 Query: 118 HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 LL + +++ ID+ RD Y + L+ +YL ++R E E Q+ ++ VA Sbjct: 121 ELLN----FDIDLLESKIDYSRDNNLDYFGLSTLKDRYLTKDR-NFETIEKPQWFFMRVA 175 Query: 178 ACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI 237 + + + + YD +S + TP + T T Q+SSC + DSL+SI Sbjct: 176 MGIGNTEEE------ILKIYDKLSNLEYLHSTPTLFNSGTLTNQYSSCYVNVVDDSLESI 229 Query: 238 NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV 297 + G+G + RIRA GS I A +G IPF K F T V + QGG Sbjct: 230 MDKAKETAFLAKYAGGVGTDITRIRATGSKIHSLNAKSSGIIPFIKIFDTIVNAIQQGGR 289 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R + ++ WHL+VE+ L L+ G R ++ + + + R+ +GE I LF Sbjct: 290 RRSSQVMYLQPWHLDVEAFLDLRETTGNPYFRTPSLNTALWMPDEIMRRIKEGEPIYLFD 349 Query: 358 PSDVPGLYDAFFAD-QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQN 416 P++ L ++ + ++++ K E+ + +++ + + + + + A TG ++ Sbjct: 350 PAECRELVTSYGEEFAKKYQECIEKAERGELELWKKIDSRDFYKKYLFKLAKTGHPWLTF 409 Query: 417 VDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---- 472 D N H+P P + + SNLC EI++P P + A+CTL++ NL Sbjct: 410 KDAHNRHNPC-PKYSVINSSNLCTEISIPNSPQS--------TAVCTLASVNLARHLKKV 460 Query: 473 ------------------------------NNLDELEELAILAVRALDALLDYQDYPIPA 502 + D+L++ V ALD +LD YP Sbjct: 461 ERETSDVKREELSPNEKNTSHLLTYSPTHSIDWDKLKDTLETMVVALDNILDKNFYPSEE 520 Query: 503 AKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQ 562 +++ M R +GIG++ F L G Y A L + + ++ + + S ELAKE+ Sbjct: 521 SRKNTMDLRPIGIGLMGFHEALIYLGIPYDSDEAIELAKEIAKFMRETVYRKSEELAKER 580 Query: 563 GACP-WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMP 621 GA P ++ + + + + T + + RN+ L A+ P Sbjct: 581 GAFPHYYEVSKRESEKVKSEELNPNEKTPTHLLTYSPTHPYNYP----PRRNAVLLAIAP 636 Query: 622 SETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHL------------------- 662 + + S I+ ++ I+ + + + G V + Sbjct: 637 TASISIIAGTSSSIDNYFSNIFSRDTLSGKFIVVNKPLMKMLEEKGIWNEEMLEKIKANQ 696 Query: 663 --------------HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGK 708 ++ +E+ + + Q++IDQ++S + + Sbjct: 697 GSIQYIDELEGVVDKRLFKTAYEVSPYRQ-IDIAAAFQQYIDQAVSKSLYIEEDL----- 750 Query: 709 VPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDD 752 + + A++ G+K+ YY + + + + + + Sbjct: 751 --RDDMENIYMYAWEKGLKSTYYCFIDKTIKGEKYTMNVNKRGE 792 >UniRef50_UPI000194E523 PREDICTED: ribonucleoside-diphosphate reductase M1 chain n=1 Tax=Taeniopygia guttata RepID=UPI000194E523 Length = 847 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 190/821 (23%), Positives = 312/821 (38%), Gaps = 144/821 (17%) Query: 11 DGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLI 70 DG ER+ DKI + GL+ + + + S + G + ++ A Sbjct: 45 DGRQERVMFDKITSRIQKLCYGLNADFVDPLCVSS----FPGAQFLLWDLDLLVPEASQA 100 Query: 71 SRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE---DYTEEE 127 S + P K E LY ++ GK+ + + D Sbjct: 101 SSNPP----------------KTCDVMED--LYTYINP--HNGKHSPMISKETLDIVLAN 140 Query: 128 FKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRE 187 ++++ I +DRD +++Y K LE YL++ + ++ E Q + + V+ + + Sbjct: 141 KDRLNSAIIYDRDFSYNYFGFKTLERSYLLK--INSKVAERPQHMLMRVSVGIH-----K 193 Query: 188 TRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSINATSSAIVK 246 + Y+ +S + +P + T Q SSC L+ DS++ I T Sbjct: 194 ADIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCAL 253 Query: 247 YVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGAATLF 305 GIG+ IRA GS I G G +P + + + QGG R GA ++ Sbjct: 254 ISKSAGGIGLAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 313 Query: 306 YPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLY 365 WHL++ L LK N G E R R + + + I L R+ +D +L P++ PGL Sbjct: 314 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 373 Query: 366 DAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP 425 D + EEFE+LY YE+ +R + VKA +L+ +++ + TG Y+ D CN S Sbjct: 374 DVW---GEEFEKLYESYERQGRVR-RVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSN 429 Query: 426 FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------NNLDELE 479 + ++ SNLC EI T E+A+C L++ L + +L Sbjct: 430 -QQNLGTIKCSNLCTEIVEYTS--------REEVAVCNLASIALNMYVTPEHSYDFKKLA 480 Query: 480 ELAILAVRALDALLDYQDYPIPAAKRGAMGRRTL-------------------------- 513 E+ + VR L+ ++D YP+P A R Sbjct: 481 EVTKVIVRNLNKIIDINYYPVPEDLNRAQFVRGAPHAELSSEETWLPQTPRSPEALPGFW 540 Query: 514 GIGVINFAYYL--AKHGKRYSDGSANNLTHKTFEA-----IQYYLLKASN-------ELA 559 G G+ + G+ A L + E+ Y L K S L Sbjct: 541 GSGLTGLRVRCSYERQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLG 600 Query: 560 KEQ--GACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLS 617 + C E T + IL D + + +DW+AL+E I +G+RNS L Sbjct: 601 TIKCSNLCTEIVEYTSREEILQYDMWNVTPSDL------WDWKALKEKIAKYGVRNSLLI 654 Query: 618 ALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVP-------------------- 657 + MP+ +++QI IEP + + G + V P Sbjct: 655 SPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQVVNPHLLKDLTERGLWNEEMKNQI 714 Query: 658 ------------DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 + L Y+ +WE+ L++ FIDQS S N + + Sbjct: 715 IAHNGSIQNIPEIPDDLKQLYKTVWEI-SQKTILKMAADRGAFIDQSQSLNIHIAEPNY- 772 Query: 706 SGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDL 745 +L +K G+KT +YY T+ A Q L Sbjct: 773 ------GKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTL 807 >UniRef50_Q66LW9 Ribonucleoside-diphosphate reductase 1 alpha chain n=4 Tax=Siphoviridae RepID=Q66LW9_BPT5 Length = 811 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 283/782 (36%), Positives = 429/782 (54%), Gaps = 47/782 (6%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVS--ISQVELRSHIQFYDGIKTSD-IHETII 63 V KRDG+ E +K++ WA G V S + + + G+ SD + + +I Sbjct: 43 VIKRDGTVEDFAPEKLN---GWAEYGCKTVDVSWSAITMAAQKTLPKGVVDSDTLMDALI 99 Query: 64 KAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDY 123 KAA LI +D P Y A L + +RK+ Y FEPP+L MV +G +++ + Sbjct: 100 KAAESLI-KDNPAYDVPAKELRLAQMRKRLYDSFEPPSLRFFHDHMVSVGAWED-MSAWI 157 Query: 124 TEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN 183 T+E+F+ ++ IDHDRD F+ +KQ KY +N TGEIYE+ QF Y+ +A + S Sbjct: 158 TDEQFEALNQVIDHDRDRLFTSGGLKQFFDKYSRRNIATGEIYETPQFAYMGMAMAMLSQ 217 Query: 184 YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSA 243 P T L Y+A+S KI++PTP + G+R+ R F+SC L++ D+LDSI+ Sbjct: 218 -PNWTILD-AIDLYNAMSLHKINVPTPPLVGLRSSDRGFASCCLVDSTDTLDSIDTAEHI 275 Query: 244 IVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAAT 303 + K V+ RAGIG + R++ P+R G H+G +P+Y+H +VK+ +Q RGG+AT Sbjct: 276 VFKMVAARAGIGYHLES-RSIADPVRNGAFPHSGKLPYYRHIDRSVKANTQQ-TRGGSAT 333 Query: 304 LFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPG 363 + YP + E+ L+ +K R + N++ MDY + N L+ R LK EDITL S P Sbjct: 334 VSYPYFDPEIIQLMQVKQQRATDENKIDKMDYSLSFNNLLLKRYLKNEDITLMSYFYAPE 393 Query: 364 LYDAFFADQE-EFERLY----------TKYEKDDSIRKQ--RVKAVELFSLMMQERASTG 410 +++AF++D E +FE +Y TK + + +V A E+ ++ R TG Sbjct: 394 VHEAFYSDDEAKFEEIYVAAEKRVASLTKIDHEGKTVPTAPKVSAKEILDTWLRIRMETG 453 Query: 411 RIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND--------------EN 456 R+Y ++ N H F + P+R +NLC+EI PT+P + + + + Sbjct: 454 RMYAHHIGESNRHGNF---LDPIRMTNLCVEITQPTRPFHHITELYKTKEQLDQMKPEDI 510 Query: 457 GEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIG 516 GE++LC L LG + +L E E+ + ++ +D +++ QDYP P + A RR +GIG Sbjct: 511 GEVSLCNLGGVVLGRMESLAEWEKTCYILLKFVDTIIEIQDYPFPTMEYTAKKRRNVGIG 570 Query: 517 VINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKG 576 ++N A +A G Y A N H+ E + Y+L KAS LAKEQGAC WFN T +KG Sbjct: 571 LMNAAGAMAAEGLAYEGIEARNWIHREAEKLSYFLHKASVRLAKEQGACEWFNRTKPSKG 630 Query: 577 ILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIE 636 IL IDTYKK +D + + L DWE+LR I +G+RNS L+A MP E+SS + TN IE Sbjct: 631 ILVIDTYKKTVDELVSVGLEMDWESLRADILKYGMRNSVLTAQMPGESSSVLLGVTNSIE 690 Query: 637 PPRGYVSIKASKDGILRQVVP---DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSI 693 PPR VSIK S + + P D+E L +Y+L +++ + ++ V MQKF QSI Sbjct: 691 PPRKIVSIKGSAVNKVIAIAPGATDWETLM-SYKLAYDVDRIEW-IKWVATMQKFFSQSI 748 Query: 694 SANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDG 753 S N YD ++F + +P +++D +TA K+G KT YY N + G Sbjct: 749 STNMYYDYTKFENEIIPGPVVVRDFMTAVKYGWKTWYYANFNTANGGGAGEEAAGCASGG 808 Query: 754 CE 755 C+ Sbjct: 809 CQ 810 >UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MCH3_CALMQ Length = 877 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 174/862 (20%), Positives = 316/862 (36%), Gaps = 134/862 (15%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + V KR+G E N K+ L A G N E+ S I+ + +S+I +++ Sbjct: 12 ITVIKRNGLREEFNPVKLLNSLKLA--GAPNPERILEEVTSQIKGKGEVTSSEISDSVQL 69 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPA---------------LYDHVVKM 109 +LIS D + A +F + K+A+G+ + L D + Sbjct: 70 MMLNLISEDF-KWHDAARNYLLFSIYKQAWGKEVVKSINSGSLTLSEAYRRGLRDWFNQG 128 Query: 110 VEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESA 169 + G + + E+ ++ +D RD+ +Y V+ L +YL++ R+ G +E+ Sbjct: 129 LNQGLWSLD-AAKFYEKHLDELMNKLDPSRDLLLTYNGVRTLMSRYLMK-RLDGSFFETP 186 Query: 170 QFLYILVAACLFSNYPRETR--LQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVL 227 Q++++ +A + + + +++V++FYD VS K +P M T + S+C + Sbjct: 187 QYMWMRIAMGVAYSEVKYGNDPIKWVEKFYDLVSQLKFLPNSPTMFNALTKLGELSACFV 246 Query: 228 IECGDSLD------------SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFH 275 I D L I + AG+G G +R G ++ Sbjct: 247 IPVDDCLSKDSNRDNPNCFFGIMDAAKLAALLFQAGAGVGYQFGELRPEGDVVKSTSGVA 306 Query: 276 TGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDY 335 +G + F + F T V QGG R GA WH ++E + K R ++ ++++ + Sbjct: 307 SGPLSFMRLFDTLVDVIKQGGKRRGAQMGMLFWWHPDIEKFITSKTGR-LKDVQLQNFNI 365 Query: 336 GVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS----IRKQ 391 V I+ T+ L+GED+ L +P + LY + +EF + Y + + Sbjct: 366 SVTIDDYFMTKALRGEDVYLLNPRECTCLYQTW---GQEFIKCYEECVSKVKAGLVKVWR 422 Query: 392 RVKAVELFSLMMQERASTGRIYIQNVDHCN-----THSPFDPAIAPVRQSNLCLEIALPT 446 RV A EL+S +++ +G + N D N + + +N C E+AL Sbjct: 423 RVNAGELWSKIVESAWDSGDPGLWNRDVANMKIEYVNDVVSEKYRVINGTNPCGEVALYP 482 Query: 447 KPLNDVNDENGEIALCTLSAFNL-----GAINNLDELEELAILAVRALDALLDYQDYPIP 501 C L + NL G + L +LAVR LD ++D +P Sbjct: 483 ------------FESCNLGSINLTKYINGNSIDWVSLANDIMLAVRFLDDVIDSNQHPHE 530 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 R R +G+G+ +A L Y A L + ++AS ELAKE Sbjct: 531 YLDRANKASRRIGLGINGWADVLVSLDIPYDSPKAIALADVVMGFVARVAVRASVELAKE 590 Query: 562 QGACPWFNETTYAKGILPIDTYKKDLDTIAN----------------------------- 592 +G P + + + G LP + + + + Sbjct: 591 KGPFPLWPSSKWRSGFLPWRVHDERVSKMLEVKGVSSDVEEYLEILKLGYGELGGLPNKA 650 Query: 593 ----EPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 L + L + T G+RN L ++ P + S I+ + IEP ++ Sbjct: 651 EEYLAKLRATDDELIKDASTVGVRNGALISIAPEGSRSLIAGVNSSIEPIFAIAYVRNLS 710 Query: 649 DGILRQVV---------------------------PDYEHLHDAYELLWEMPGNDGYLQL 681 G L + P +H + E+ ++ + Sbjct: 711 IGKLIEYNYTALRKLKDSNALDNETTSKVLESGMLPSNHVMHPVLKTANEIHWR-WHVFM 769 Query: 682 VGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGV--KTLYYQNTRDGAE 739 K+ D +S N + + A+ G T+Y ++ + Sbjct: 770 QVTFAKWSDSGVSKTINMP------SNATKEDVNGAYRLAWALGAFGITVYRDKSK-AVQ 822 Query: 740 DAQDDLVPSIQDDGCESGACKI 761 + + ES A K+ Sbjct: 823 VIYTGVEGKGKAQSTESKAIKV 844 >UniRef50_A7KUZ9 Nrd alpha subunit n=2 Tax=root RepID=A7KUZ9_9CAUD Length = 767 Score = 583 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 175/715 (24%), Positives = 304/715 (42%), Gaps = 61/715 (8%) Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYG------QFEPPALYDHVVKMVEMGKYD 116 I A + I APD+ ++AA + + + K A + + Y + + EMG Y Sbjct: 55 IFYALNNIDMGAPDWTFVAANMKLQQMYKTASENRGYSRSLKYGSFYKLIKTLTEMGIYS 114 Query: 117 NHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV 176 +L Y+EEE ++ ID +D F++ + L +Y + G +YE Q +++ Sbjct: 115 PAILASYSEEEINEIGRMIDPSKDSLFNFIGLFLLNDRYAATD-YQGSLYELPQERLMMI 173 Query: 177 AACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDS 236 A N P+ TRL ++K Y A+S + TP + Q SSC + + DSLD Sbjct: 174 AVTTMINEPKATRLAHIKELYWALSNLYATAATPTFANAGKSYGQLSSCFIDKVDDSLDG 233 Query: 237 INATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG 296 I ++ + G+ + ++RALGSPI+G E +G P+ K F + Q G Sbjct: 234 IYLSNMDAARLSKDGGGVALYFSKVRALGSPIKGFEGKSSGTTPWIKMFNQTAITVDQLG 293 Query: 297 VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGED---- 352 R GA ++ + H ++ L L N G E +R R + GV + L +L + ++ Sbjct: 294 QRKGAFAIYMCLDHKDIMKFLELGLNNGDEADRAREIFTGVAVPDLFMKKLDEVDENGRS 353 Query: 353 ---ITLFSPSDVPG-------------LYDAFFA-DQEEFERLYTKYEKDDSIRKQRVKA 395 F P + L D + D + +E Y + + + + +A Sbjct: 354 IGQWHTFCPHQIKQHMQWKDENGNLLTLDDFYDEKDTKYYEEKYMEAVNNPLLPRDTHRA 413 Query: 396 VELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP----VRQSNLCLEIALP---TKP 448 +++ +M+ + TG Y+ D N +P + SNLC EIA + Sbjct: 414 MDIMVRIMEIQLETGMPYMFYRDQVNRMNPNKHVHGIGRTAIYCSNLCTEIAQNQVSSMI 473 Query: 449 LNDVNDEN---------GEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYP 499 + + DEN GE +C L++ NL L + + R LD ++D Sbjct: 474 IGEYIDENENIHMVRSPGEYVVCNLASVNLAKAVPAGVLARVIRIVTRMLDNIIDINTIS 533 Query: 500 IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELA 559 + A R +G+G + + LA G + +A N +E Y+++ +S ELA Sbjct: 534 VLQAGITNKRYRPIGMGAYGWHHLLAILGLDWESEAAVNYADTLYEEFAYHVIDSSVELA 593 Query: 560 KEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSAL 619 KE+G +F + + G Y D ++ + W+AL+E + G+RN + AL Sbjct: 594 KEKGTYKYFEGSAWHTGE-----YFDQRDYVSAK-----WKALKEKVAKFGVRNGWMMAL 643 Query: 620 MPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEH-LHDAYELLWEMPGNDGY 678 P+ T++++ +T+G +P + + + P +H ++ Y Sbjct: 644 APNATTAKVGGSTDGNDPITAVEGAEEKGNFKFKVTAPGLDHNTYNVYRKTRHHIDQLWS 703 Query: 679 LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQN 733 ++ Q+ IDQSIS N + +LL TA+K G+KT YY Sbjct: 704 VKQTAKKQRHIDQSISFNLYVA------SDIDGAELLNIHKTAHKLGIKTTYYVK 752 >UniRef50_Q8SCK6 PHIKZ306 n=2 Tax=phiKZ-like viruses RepID=Q8SCK6_9CAUD Length = 779 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 244/778 (31%), Positives = 380/778 (48%), Gaps = 31/778 (3%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGL-HNVSISQVELRSHIQFYDGIKTSDIH 59 + + K DG+ E + KI+ +WAA+ L V S V + + D + ++ Sbjct: 16 LTMLKTIIKLDGTEEAYSPAKINGWGEWAAQHLGDKVDWSSVVMDAVQALGDKTSSQELQ 75 Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHL 119 +I+ + ++R Y +A RL +LRKK YG P + +M + G Sbjct: 76 LQLIE---ECLNRKTWSYYLMAGRLYAIYLRKKFYGLNGIPTVKALQTRMRKDGIIVKL- 131 Query: 120 LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 DY+ +E+ Q++ IDHD D+ + ++ + GKY ++NR TG+ YE+AQF+Y+ +A Sbjct: 132 --DYSSKEYAQIEKIIDHDLDLLCPHFSLHHIRGKYALRNRKTGQEYETAQFVYMRMAMA 189 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINA 239 L P ETR+ +V+ +Y +S +S PTP + T R F+SC L GD+ S+ Sbjct: 190 LAEKEPAETRMTHVENYYKLLSNKILSAPTPNYVNLGTKLRGFASCCLFASGDNGVSLAM 249 Query: 240 TSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRG 299 AGIG+N R++G PIR G H G P+ AV++ Q G RG Sbjct: 250 GDYIANIMTQSSAGIGVNL-MTRSIGDPIRNGLIIHQGKKPYIDVIGKAVRANLQNG-RG 307 Query: 300 GAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMY-TRLLKGEDITLFSP 358 GA T +Y + E + + L+N R E + R + Y NK K I +F+P Sbjct: 308 GAVTCYYSAFDPEADMITQLRNPRSTEDRKNRDLHYAFLSNKFFAKKAAQKDGMIFVFNP 367 Query: 359 SDVPGLYDAFFA-DQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417 P L+DAF++ D ++F +LY KYE D K V A +L M+ E TG IY + Sbjct: 368 FTAPDLHDAFYSGDIDKFIKLYEKYEADPKFEKTYVNARDLLKSMLVEAYETGTIYSAQI 427 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND-------ENGEIALCTLSAFNLG 470 D N H+PF P+ SNLCLEIA PTKP + D GEIA C+L+A + Sbjct: 428 DELNHHTPFKE---PIYSSNLCLEIAEPTKPYYRMEDLYSSEDHGRGEIATCSLAAIAVD 484 Query: 471 AINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530 + + E A A++ +D + +Y P A R + G+G++ A ++A+ G + Sbjct: 485 NVPDKQTYEMAAYYALKMIDYCILNAEYAFPHLALTAKNRMSAGVGIMGLATHMARAGLK 544 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTI 590 YS + H E Y+L+KAS +++KE+G PW ++T + +G P TY K +DTI Sbjct: 545 YSSDAGKAEIHFIAERHMYFLIKASLKISKERGNAPWIHKTKWPEGWTPRKTYNKSVDTI 604 Query: 591 ANEPLH--YDWEALRESIKTH-GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS 647 Y W+ L + IK + G+ +S L+A MP E SS+ +TNG P R + K Sbjct: 605 IEGGFEELYPWDELEKEIKENGGIAHSVLAAYMPGEASSKALGSTNGPYPVRRLILNKTD 664 Query: 648 KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSG 707 + P + YE +++P D + I+QK+ DQ+ISA+ S Sbjct: 665 NGARVLWAAPYGDDDSYVYESAYDIPTKD-LIDCYAIIQKWTDQTISADLY--RRIVGSE 721 Query: 708 KVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQ----DDGCESGACKI 761 K+ ++L + K G+KT YY N A L +++ + GC G+C + Sbjct: 722 KISSNEMLGNHFYMVKRGMKTRYYVNLETAAGLDIKSLERAVEVTNTEVGCAGGSCTL 779 >UniRef50_B4UA32 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA32_HYDS0 Length = 1005 Score = 556 bits (1434), Expect = e-157, Method: Composition-based stats. Identities = 161/644 (25%), Positives = 274/644 (42%), Gaps = 79/644 (12%) Query: 5 LLVTKRDGSTERINLDKIHRVLD----------------------WAAEGLHNVSISQVE 42 + V KR G+ E+++L KI VL+ W E L+ ++I ++ Sbjct: 1 MEVIKRSGAREKLDLLKIRTVLENALSLLKEWKTTKDISAQDIEEWTMEDLNEINIDEIM 60 Query: 43 LRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQ-FEPPA 101 I +DGI+T+ I + I+ + + D P Y +A + + + K+A+G + P Sbjct: 61 EDIEINIFDGIETAAIFQHILHSLLTR-AIDDPIYDAMARNVLLQRIYKQAFGGMYSPKK 119 Query: 102 LY-----DHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYL 156 Y D++ VE+G D L Y + + + + RD + + L +YL Sbjct: 120 AYKELFIDYIDNAVELGLLDEKLASYY---DLEMLALELVPKRDQLLKFNGLYNLMDRYL 176 Query: 157 VQNRVTGEIYESAQFLYILVAACLFSNYP-RETRLQYVKRFYDAVSTFKISLPTPIMSGV 215 +++ TG I E+ Q+ ++ VA + E R + FY +S+ + TP + Sbjct: 177 IKDLDTGNILEAPQWFWMRVAMGVALVEKTPEDRNHWAIEFYHMMSSMEFIPSTPTLFNS 236 Query: 216 RTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFH 275 T Q SSC +++ D L I T + G+G+ A ++RA S IR + Sbjct: 237 GTRFPQLSSCFVVDEEDDLSKIFETVKQVGMLNKHAGGVGLPATKLRAKDSIIRSIQGKS 296 Query: 276 TGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDY 335 +G IPF K + + SQGG R G+A WHL+V + K G + R +++ Sbjct: 297 SGIIPFLKIIDETITAVSQGGRRRGSALASLEPWHLDVFDFVRTKRKWGDDSQRFKNLKI 356 Query: 336 GVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKD---DSIRKQR 392 + +N R+ + D LF P+D P L + ++F R Y+K + IR ++ Sbjct: 357 ALFLNDEFMRRVEENGDWYLFDPADCPKLVSTY---GKKFSREYSKCIRKALSGKIRHKK 413 Query: 393 VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDV 452 +KAVELF ++ TG + D N P + + +NLC E L + Sbjct: 414 IKAVELFKEAIENTIQTGEPWYTFKDPINIRHP-NKHTGTILTTNLCTEQLLVSTY---- 468 Query: 453 NDENGEIALCTLSAFNL-------------------------------GAINNLDELEEL 481 I C L + L + ++ + + Sbjct: 469 ----DSIESCNLGSLVLPRALLTHFRVNEHAQPLNSSENGSKHTKFLSNNTFDWEKFKAV 524 Query: 482 AILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTH 541 A+R LD ++D Y + A ++G R +G+G + + + K A L Sbjct: 525 IRKAIRFLDNVIDANYYALEAVEKGTKQSRKIGLGFMGYQDMIEKLKLPVDSKEALKLLD 584 Query: 542 KTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKK 585 K E + Y ++ S ELAKE+G P F+ + ++KGILPIDT + Sbjct: 585 KIGETMSYVAIETSVELAKERGTYPNFDGSDWSKGILPIDTLEH 628 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 92/220 (41%), Gaps = 42/220 (19%) Query: 545 EAIQYYLLKASNELAKE--QGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEAL 602 + + + S+++A++ + F+ K T + + + + ++WE L Sbjct: 690 KYVGLQVYHDSDDIAEDESRAISSHFDAKEQDKSTTVSQTLQSSENGLEHTLPAFNWEEL 749 Query: 603 RESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY--- 659 RE +K G+RN+ + L P+ T S I+ + EP V + + G +V ++ Sbjct: 750 REKVKQ-GIRNACQTTLAPTATISIIAGTSQSFEPYYALVYSRTNIAGRFLEVNENFIRD 808 Query: 660 ----------------------------EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQ 691 + + D Y+ +E+ + Y++ ++QK+ID Sbjct: 809 LKKLGLWDRLREDVLLQQGSIQDIKEIPQEIKDIYKTAYEIDT-EVYIKQAAVLQKWIDS 867 Query: 692 SISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYY 731 SIS N ++ Q++++ L A+K+G+K YY Sbjct: 868 SISRNLYFNTRDP-------QKIMEIYLKAWKYGLKATYY 900 >UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Sulfolobaceae RepID=C3N5F1_SULIA Length = 838 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 163/833 (19%), Positives = 297/833 (35%), Gaps = 159/833 (19%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDG-IKTSDIHET 61 + + V KRDG + L+KI L + + + D I T I + Sbjct: 11 RKIKVIKRDGRVDEFKLEKILSKLSS----VPDEVTDGIVNDVQANVKDNAIDTRAIADI 66 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE 121 + + + S P LA R + + +G+ GK+ + Sbjct: 67 VERNLIEN-SLKYPFLMELAKRYVLARIYNHVFGK----------------GKWKDF--- 106 Query: 122 DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF 181 +++D+ SY A+K LE +YL+++ T E+ Q L+ VA L Sbjct: 107 ---------------NEKDLLLSYNALKVLEARYLLKDPNTLRYIETPQMLFRRVARFLA 151 Query: 182 SNYPRETRLQ-----YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSL-- 234 S + + + ++FY+ +S+ K +P + T S+C +I D++ Sbjct: 152 SVERKYGKSEAEVKQLEEKFYEMISSLKFVPNSPTLMNSETRLGILSACFVIPVKDAMTT 211 Query: 235 ---DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS 291 D I A Q G G + +R G + +G + F K F + Sbjct: 212 PEGDGIYDALRATALVHQQGGGTGFDFSELRPKGDVVASTAGVASGPVSFMKVFDASTDV 271 Query: 292 CSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 QGG R GA WH ++E + K + ++ ++++ + V ++KGE Sbjct: 272 IKQGGKRRGANMGVMHAWHADIEDFIRAKTGQ-LKDVQLQNFNISVGAYDYFMEAVVKGE 330 Query: 352 DITLFSPSDVP----------GLYDAFFADQEEFERLYTKYEKDDSIRK----------- 390 + L +P + ++ E + ++ E+ + Sbjct: 331 SVPLINPRKTKIAGRDHEYYITKARGYMNEEWIQEVIISELEEKGGVVSLDESKVITVDE 390 Query: 391 ------------QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNL 438 + V A LF +++ +G + +D N P + + +N Sbjct: 391 ALIIASKEGAVVRYVNAKSLFDEIVKGAWDSGDPGLLFIDTINRRHPV-WYLGKINATNP 449 Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN---------NLDELEELAILAVRAL 489 C E P P C L + NL + D L E+ VR L Sbjct: 450 CGE--EPLLPWE----------SCNLGSINLEKFIIERNGKVEIDWDGLAEIISYGVRFL 497 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 D ++D YP+ + R +G+GV+ A K G Y A L+++ + I Y Sbjct: 498 DNVIDANRYPLKQIEDATKRTRKVGLGVMGLARMFIKLGIAYDSVDAIYLSYQLAKFIFY 557 Query: 550 YLLKASNELAKEQGACPWFNETTYAK---------GILPI----DTYKKDLDTIANEPLH 596 + KAS E+AKE+G P ++ Y +L I D + + Sbjct: 558 HAYKASIEVAKEKGPFPTYDSKLYRDIWESALDFNSLLQIAEVADKPSDYVKKLTGVVDK 617 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV 656 D++ L++ +GLRNST+ ++ P+ T S I+ ++ IEP ++ G ++ Sbjct: 618 LDFDLLKDERLKYGLRNSTIVSIAPTGTISIIAGTSSSIEPLFALAFVRNVAVGKFIEID 677 Query: 657 PDY-------------------------------EHLHDAYELLWEMPGNDGYLQLVGIM 685 P + L + E+P ++ Sbjct: 678 PLFLEYLRKYELDDPEVIQKIAESGIIGDNVFMPRSLRKLFRTAHEVPPIY-HVLHQAAW 736 Query: 686 QKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 Q++ D S N + P + + K L A+K G+K T+Y ++ Sbjct: 737 QQWNDSGTSKTINL------RSEEPPETVEKVYLLAWKLGIKGITVYRDKSKQ 783 >UniRef50_A9WCH6 Ribonucleoside-diphosphate reductase n=3 Tax=Chloroflexus RepID=A9WCH6_CHLAA Length = 822 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 125/663 (18%), Positives = 248/663 (37%), Gaps = 89/663 (13%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPR-----ETRLQYVKRF 196 + A L+ +YL++N G++ E+ + ++ VA + + R E + +RF Sbjct: 10 NLTDIARTVLKKRYLLKNE-HGDVIETPETMFWRVAETIAAVDARYGASAEQVEERAERF 68 Query: 197 YDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGI 256 Y ++ +P + P Q S+C ++ D+L SI T G G Sbjct: 69 YHLMTQGYFEPNSPTLMNAGRPLGQLSACFVLPIDDNLTSIYETLKHQALIHQSGGGTGF 128 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 + R+R +R +G + F + + ++ QGG R GA H ++ Sbjct: 129 SFSRLRPRNDVVRSTMGVASGPVSFMDVYNHSTEAIKQGGTRRGANMGILRCDHPDILEF 188 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 + K ++ ++ + + V I + + E+ L +P G A ++ + Sbjct: 189 ITCK----LDTTKITNFNISVAITDAFMRAVERDEEYDLINPRTGLGQ----IASRDGLK 240 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 T + + R++A +F L++Q +TG + +D N ++P P + + Sbjct: 241 HPLTGEVLVPAGQPMRLRARMVFDLIVQCAHATGEPGLFFIDRANEYNPV-PHLGEYEAT 299 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN------NLDELEELAILAVRALD 490 N C E L +C L + NLG + + L ++ + R LD Sbjct: 300 NPCGEQPLLAYD------------VCNLGSINLGKFVTDAGTIDWESLRDVVHESTRFLD 347 Query: 491 ALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYY 550 ++D YP+ + + R +G+GV+ +A L + G Y+ A +L + I Sbjct: 348 NVIDANHYPLEQITQLSQRIRRIGLGVMGWADMLVRLGIPYNSAQAIDLARQVMRFIDEE 407 Query: 551 LLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHG 610 AS +LA+E+G P + + + P T + D P Sbjct: 408 SKVASEQLARERGPFPEWEYSIWG----PDATCARRPDGSRIRPQRL------------- 450 Query: 611 LRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY----------- 659 LRN ++ + P+ T S I+ ++GIEP + D + + D+ Sbjct: 451 LRNCNVTTVAPTGTISIIAGCSSGIEPLFAIAFWRYQADTRMLDINQDFVAQAKREGWYS 510 Query: 660 ----------EHLHD---------AYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYD 700 H+H + ++ + ++++ Q++ D +IS N+ Sbjct: 511 DELMERIADTGHIHHPEVPASVQRVWVTAHDI-APEWHVRMQAAFQEYTDSAISKTINFP 569 Query: 701 PSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 P Q+ + A++ G K T+Y +R + S + Sbjct: 570 HEATPD------QVREAYELAFRLGCKGITVYRDGSRANQVLSTGSTGKSAEPAPASDQP 623 Query: 759 CKI 761 ++ Sbjct: 624 VEL 626 >UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU7_9EURY Length = 762 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 160/786 (20%), Positives = 288/786 (36%), Gaps = 165/786 (20%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYD-GIKTSDIHETIIK 64 +V KRD S + KI + A + YD +K +++ + Sbjct: 4 VVIKRDDSKVDFDRTKIENAVFKA----------------YKSVYDSNVKEAELRKRAEN 47 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYT 124 + D++ I KK E + + V+ + + +++L + Sbjct: 48 STTDIVKE-------------IEATGKKEIRVEEIQDIVEKVLMLKDQTVAKSYILYRHK 94 Query: 125 EEEFKQMDTFID-HDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN 183 + E + + D + + L +YL++ G+I ES + L+ V+ + + Sbjct: 95 KAEIRAFRASLGIPDDGLKLPINTLIVLASRYLLKGP-DGKIAESPKQLFTRVSHYIAAA 153 Query: 184 YPRETRLQ-----YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSIN 238 + + FYDA++ FK +P + T Q S+C ++ GDS+ I Sbjct: 154 EKKFGKSDDETNALEMEFYDAITNFKFMPNSPTLMNAGTKLGQLSACFVLPVGDSIVEIF 213 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVR 298 G G + R+R ++ +G + F K F A + QGG R Sbjct: 214 DAVKYAAIIHQSGGGTGFSFSRLRPTNDMVKSTGGVASGPVSFMKVFDIATEQVKQGGKR 273 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 GA + H + +V K N G +R+ + V I L D +L +P Sbjct: 274 RGANMGILRVDHPSILDFIVAKENEGT----LRNFNISVAITDEFMKALEANRDYSLVNP 329 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 + ++ A +++L++ TG + +D Sbjct: 330 RN--------------------------GKVVGKLNARAVWNLIITMAWKTGDPGLVFLD 363 Query: 419 HCN-THSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----- 472 N ++S P + PV +N C E P P + C L + N+ + Sbjct: 364 RINSSYSNPVPTLGPVESTNPCGE--QPLYPYD----------SCNLGSINMAKMLKKND 411 Query: 473 ----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHG 528 + DEL+ + + VR LD +++ YP+ + R +G+G++ +A L K G Sbjct: 412 GQYDIDWDELKRITRMGVRFLDNVIESNTYPLKEIEDVTKKIRRIGLGIMGWADMLIKLG 471 Query: 529 KRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAK-GILPIDTYKKDL 587 RY A L K I K S ELA+E+G P F ++ + K G P Sbjct: 472 IRYDSNEALMLAEKVMSFITENARKMSEELAEERGPFPAFKDSIWYKLGYKP-------- 523 Query: 588 DTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIK- 645 LRNST++ + P+ T S I+ A+ GIEP V ++ Sbjct: 524 -----------------------LRNSTVTTIAPTGTISIIAGGASQGIEPIFSVVYMRN 560 Query: 646 --ASKDGILRQVVPDYE-------------------------------HLHDAYELLWEM 672 S L +V ++E + + +++ Sbjct: 561 VHESLGSNLIEVNNEFEAMAIENNFYSDELMKKLAGRVSIQDVEEIPQEIRRLFVTAYDI 620 Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLY 730 + ++++ QK++D ++S N FPS P Q + K + AYK G K T+Y Sbjct: 621 -APEWHVRMQAAFQKYVDNAVSKTIN-----FPSWATP-QDIEKAYVLAYKLGCKGITVY 673 Query: 731 YQNTRD 736 +++ Sbjct: 674 RDSSKS 679 >UniRef50_UPI0001792B32 PREDICTED: similar to AGAP010198-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792B32 Length = 766 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 168/787 (21%), Positives = 326/787 (41%), Gaps = 99/787 (12%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQ-FYDGIKTSDIH 59 + ++L V KRDG+ E+++ D+I + GL + + + + + GI TS + Sbjct: 4 LKKHLYVQKRDGTIEKVHYDEIIARIKQLCYGLEKIDPAATAIHVIKKCLFAGITTSQLD 63 Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHL 119 + + A + + PDY+ LAAR+AI +L K+ +F + D + K ++ L Sbjct: 64 DAAAEMAITMATI-HPDYEKLAARIAISNLHKQTKEKFSD--VIDDIHKN--DDYWNTGL 118 Query: 120 LEDYTE---EEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV 176 +D E + +++ I+++ D Y K L +LV++ + E Q L++ V Sbjct: 119 SDDIYEIIMKNKDRLNEAINYENDYILDYFGFKYLTQNFLVKSE--NQTIERPQHLFMKV 176 Query: 177 AACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE-----CG 231 A + + + Y +S K+ + +P++ ++ R+ + V+ Sbjct: 177 AVGIHGD-----DIDSAIETYKMLS-QKLCMFSPVVMQLQPAARKLNVSVISHYSVAMIA 230 Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS 291 DS+D I T + + ++ + + ++ +IRA G+ I+G +G K + + V Sbjct: 231 DSIDGIYDTLNRLSTFILPYSSVAVHVHKIRAAGTYIKGSNGKSSGLPLMLKQYDSMV-H 289 Query: 292 CSQGGVRGGA---ATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLL 348 C + R + ++ +WH ++ ++ + ++++ + I R+ Sbjct: 290 CKETLERPKSIKGVAIYCELWHADIMKIIDQIRKTTIADIKLKNSQLALWIPDEFMRRVE 349 Query: 349 KGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE-KDDSIRKQRVKAVELFSLMMQERA 407 + + SP PGL D EEF+ LY +YE K S ++++A +L+S ++Q + Sbjct: 350 NDQMWSFMSPDHCPGLIDVH---GEEFDNLYKEYELKSKSFVMRQIEAKKLWSQIIQSQI 406 Query: 408 STGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAF 467 TG + D CN S + + ++ + + T + E+A CT ++ Sbjct: 407 ETGLPLLLFKDACNAKSN-ESHLGTIQCAGRNGDTVQFT--------ASDEVATCTTASI 457 Query: 468 NLG------AINNLDELEELAILAVRALDALLDYQDYPI---PAAKRGAMGRR-TLGIGV 517 ++ I + +L+E A L+ +++ + + K G + +GIG+ Sbjct: 458 SVDMFLTSENIFDFSKLKETAKKITYDLNKIIENNNVILNKEDQLKLGLKQNQLAIGIGI 517 Query: 518 INFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGI 577 A K + + A L + E I Y L+AS ELA + G + + +KG+ Sbjct: 518 QGLADLFIKMRYPFDNKEARYLNIQIHETIYYGALEASCELASKNGPYKTYPNSPTSKGL 577 Query: 578 LPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637 L D + + +DW +L+ I HGLRNS ++ +E S I N IEP Sbjct: 578 LQFDLWNVKPSNL------WDWNSLKTKIAQHGLRNSLVTVTSNTEVESTIFGNVNSIEP 631 Query: 638 P-----RGYVSIKASKDGILRQVVPD-------------------------------YEH 661 R Y+S+ SK ++ V P + Sbjct: 632 LDTNVKRRYISLGESKPKEIQVVNPYLLKDLHDRKLWDEKLIPELVNNMGSIQEINLPDD 691 Query: 662 LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTA 721 L Y WE+ + + FIDQS + + N K + + ++ Sbjct: 692 LKQLYRTKWEI-DQKVLVTMAADRAPFIDQSQAFSLNMV-------KANEDIISEMHIST 743 Query: 722 YKFGVKT 728 +K G+KT Sbjct: 744 WKMGLKT 750 >UniRef50_Q1IXG5 Ribonucleoside-diphosphate reductase n=6 Tax=Bacteria RepID=Q1IXG5_DEIGD Length = 649 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 156/654 (23%), Positives = 258/654 (39%), Gaps = 38/654 (5%) Query: 109 MVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYES 168 MVE G +D +L Y EE K + R S+ ++ +Y + E Sbjct: 1 MVERGFWDGEMLARYRPEEVKAVFNRAYSHRFRFQSFMGAQKFYAEYATKTPDGSRYLER 60 Query: 169 AQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP-TRQFSSCVL 227 + +VA + D + TP + T + +SC L Sbjct: 61 YEDRMSMVALARAGG-----NAELALTLVDHLVRQTFVPATPTLMNSGKANTGRLTSCFL 115 Query: 228 I-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ 286 + +C DSLDSI T G+GI+ +RA G +R + G K F Sbjct: 116 LQDCTDSLDSIMKTQHFAADLSKNGGGVGIDLSNLRARGESLRHLQGVTKGAAAVAKLFD 175 Query: 287 TAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR 346 + Q G R GAA + + H + + LL K E R++ + I + Sbjct: 176 VLFRYADQAGQRQGAAVVNLNVMHPDFQELLAGKKIATDEDARLKTLSICAVIPDVFMQA 235 Query: 347 LLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQER 406 + +D+ P F D + ++ Y ++ +IRK+RV A +L + + Sbjct: 236 VRDDKDVYQVYPRSYEQATGRIFTDID-WDTEYASIVENPNIRKRRVSARQLLQEIALTQ 294 Query: 407 ASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPL------NDVNDENGEIA 460 +G Y+ + N +P P + V+ +NLC EI PT P + DE G Sbjct: 295 GESGYPYLLFTGNANRANPV-PNVGTVKMTNLCSEIMQPTLPSSFHPYGEEARDEIGLDV 353 Query: 461 LCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDY-PIPAAKRGAMGRRTLGIGVIN 519 C L++ ++G +L + A+ LD + + +PA R R++G+G + Sbjct: 354 SCNLASLHIGNALKSGDLGGVVRAAISMLDDVAQSTNITEVPAVARANREMRSIGLGAMG 413 Query: 520 FAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNETTYAKGIL 578 +LA+HG Y A FEA+ ++ +AS ELA++ G F + Y G Sbjct: 414 LHGHLAEHGIAYGSPEALAFCDLFFEAVHFHARRASMELARDTGFVFAGFQGSRYQSGEY 473 Query: 579 --PIDTYKKDLDTI-----------ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETS 625 P +++ A P DW L I+ +GL +S + A+ P+ + Sbjct: 474 FAPYTEREREPAQDLAPEVRAALQGAWLPTREDWRQLVSDIQRYGLAHSHVMAIAPTGSI 533 Query: 626 SQISNATNGIEPPRGYVSIKASKDGILRQVVPDY-EHLHDAYELLWEMPGNDGYLQLVGI 684 S ++NAT + P V + S G +P E YE ++M + V Sbjct: 534 SYVANATASVMPITERVETRTSGKGKTIYPMPGLNEQTEWFYEEAYDMDMRR-VIDTVAT 592 Query: 685 MQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGA 738 +Q+ +DQ IS F V L + ++AY+ G+K+LYY R Sbjct: 593 IQRHVDQGISCTL------FVRSNVTTADLARLYISAYRKGLKSLYYLRQRRAT 640 >UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Methanomicrobia RepID=A0B8R8_METTP Length = 688 Score = 527 bits (1358), Expect = e-148, Method: Composition-based stats. Identities = 143/805 (17%), Positives = 269/805 (33%), Gaps = 186/805 (23%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVS-------ISQVELRSHIQFYDGIKTSD- 57 + KRDG + +I R + A L V +V +F D I + + Sbjct: 15 RIRKRDGRIVDFDPSRISRAISKAFNALGIVDEKTPVELAGRVVDVVDERFRDEIPSVED 74 Query: 58 ----IHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMG 113 + E +I A Y +A Sbjct: 75 VQDIVEEVLIDAG----------YAQVA-------------------------------- 92 Query: 114 KYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLY 173 ++L E ++ ++ D+ S A++ L+ +YL ++ G + E+ ++ Sbjct: 93 --KAYILYRQRRSEIREAKHYLGVADDLKLSVNAIEVLKKRYLKRDEF-GNVVETPGEMF 149 Query: 174 ILVAACLFSNYPR--ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG 231 VA+ + + R K+F + + +P + P Q S+C ++ Sbjct: 150 ERVASAVSAVERRYEGDADDARKKFLSMMRSLSFLPNSPTLMNAGLPLGQLSACFVVPVE 209 Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS 291 DS+ I + G G + R+R G +R +G + F + F A Sbjct: 210 DSIAGIFDALKYMALIHQSGGGTGFSFSRLRPKGDVVRSTGGIASGPVSFMRIFDAATDV 269 Query: 292 CSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 QGG R GA + H ++ + K+ G++ + + V I + + + Sbjct: 270 IKQGGRRRGANMGILRVDHPDITEFIACKDRGGMD-----NFNISVAITEEFMRQCERDG 324 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR 411 + L +P + A +L +M G Sbjct: 325 SVELINPRT--------------------------GEATGEMSARDLMVMMATYAWRRGD 358 Query: 412 IYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGA 471 + +D N P + +N C E P P C L + NL Sbjct: 359 PGVVFIDRINALHPVP---GIIEATNPCGE--QPLLPFE----------SCNLGSVNLSR 403 Query: 472 INN-----LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAK 526 + D LEE LAVR LD ++D +P+ + + R +G+GV+ FA L + Sbjct: 404 MVERGEISWDRLEETVRLAVRFLDDVIDANRFPLKQIEDATLRTRKIGLGVMGFAEMLIQ 463 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKD 586 G Y+ A + + I + S L +E+G+ P F E++ K Sbjct: 464 LGVSYASQDALRIAEELMAFITKTAREESCALGRERGSFPLFEESSLKK----------- 512 Query: 587 LDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKA 646 W+A +RN+T++ + P+ T S I+ ++GIEP ++ Sbjct: 513 ------------WDA---------MRNATVTTIAPTGTISIIAGTSSGIEPLFAVSFVRH 551 Query: 647 SKD--------------------------------GILRQVVPDYEHLHDAYELLWEMPG 674 + G ++++ + + + + ++ Sbjct: 552 VLEGARLIESSPLFERMASERGIMTPALRAEVARRGSIQEIPGIPDDIKELFLTALDI-S 610 Query: 675 NDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQ 732 + ++++ QK D ++S N K + ++K AY+ G K T+Y Sbjct: 611 PEQHVRIQAAFQKHTDNAVSKTVNLP------EKASVSDVIKVYRLAYELGCKGITVYRY 664 Query: 733 NTRDGAEDAQDDLVPSIQDDGCESG 757 +R E P +GC Sbjct: 665 GSR---EQVLYLGEPDALANGCRFC 686 >UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hydrogenothermaceae RepID=C0QPQ0_PERMH Length = 847 Score = 527 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 167/836 (19%), Positives = 295/836 (35%), Gaps = 171/836 (20%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSIS-------QVELRSHIQFYDG-IKTSD- 57 + KRDG N +KI + A + + S +V G I + Sbjct: 5 IRKRDGRIVPFNPEKITNAIWKAMQAVGEKDFSTAEKISKEVVRELERTLKPGEIPDVEQ 64 Query: 58 IHET----IIKAAADLISRDAPDYQ--------------------------------YLA 81 I + +I+A +++ Y+ LA Sbjct: 65 IQDIVERKLIEAGLARVAKAYILYRQKRAEIRKEKQQILNKKEIDEVDKRFDINALRVLA 124 Query: 82 ARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQ--MDTFIDHDR 139 AR K + V + YD + Y+++E K+ ++ F D +R Sbjct: 125 ARYLNKDRAGKIIESPKQLFQRVAVNTALPSLLYDERV---YSKKELKKQPVEDF-DPER 180 Query: 140 --------DMTFSYAAVKQLEGKYLVQNRVTGEIYESAQF--LYILVAACLFSNYPRETR 189 D T + ++ L+ Y +R+ E F L ++ F +Y RE Sbjct: 181 YEGKLKIGDYTLNRYHLEGLKRVY---DRLNNERRMKIPFSKLLKMIEKGDFESYGREID 237 Query: 190 LQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVS 249 ++Y + K TP++ P +C +++ DS++SI T Sbjct: 238 -----QYYSIMVEKKFMPNTPVLVNFGNPLGMGMACFVLDMEDSIESIMETLKRAALIFK 292 Query: 250 QRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMW 309 G G N ++R G I +G I F + QGGVR GA Sbjct: 293 AGGGCGYNFSKLRPKGDFISTTHGKSSGPIAFMTLYDKMTDVIKQGGVRRGANMGILNSD 352 Query: 310 HLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFF 369 H ++E +V K ++ + + V + + + + + L +P D Sbjct: 353 HPDIEEFIVAKKGN----VQLTNFNISVFLKEDFWDYYRENKPYPLINPRD--------- 399 Query: 370 ADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPA 429 + V LF ++ E + + D+ N ++PF Sbjct: 400 -----------------GKVWKYVNPRNLFDTIVYEGWESAEPGLLFDDNINRYNPFLET 442 Query: 430 IAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-------------NNLD 476 ++ +N C E+ L C L + NL A + D Sbjct: 443 FGRIQATNPCGEVLLYPNE------------SCDLGSINLWAFIKEYYDGNGRKVEVDWD 490 Query: 477 ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 LE+ +A R LD +LD YP ++ + R +G+G++ A +L + Y+ Sbjct: 491 GLEKTVRIATRFLDNVLDINKYPFKEIEKETLKNRKIGLGIMGLADFLFELEIPYNSEDG 550 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 + E + YY + S +LAKE+G P +N++ Y KG LPI +++ E + Sbjct: 551 RRWMERVMEFVNYYSKEESIQLAKERGKFPSYNKSFYRKGKLPIRGFEEK------ESWN 604 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV 656 DW+ L + IK HGLRN+ + + P+ + S I+ T+GIEP V K G V Sbjct: 605 LDWDKLIDKIKKHGLRNAFTTVIAPTGSISMIAGTTSGIEPIFALVYEKKVTVGTFYYVD 664 Query: 657 PDY--------------------------------EHLHDAYELLWEMPGNDGYLQLVGI 684 P + E + ++ D +++ + Sbjct: 665 PVFEKTMEREGIFDDTLIKDVSKNEGSIQDIKYIPEKWKKVFVTAMDISAED-HVKALAS 723 Query: 685 MQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGA 738 +QK+ D S+S N+ ++ + + L A+ G K T+Y + G Sbjct: 724 VQKWTDSSVSKTINFP------EDATVEDMKRAYLLAHYLGCKGLTVYRYKSIKGV 773 >UniRef50_B8HJ14 Ribonucleoside-diphosphate reductase n=158 Tax=root RepID=B8HJ14_ARTCA Length = 726 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 158/681 (23%), Positives = 275/681 (40%), Gaps = 48/681 (7%) Query: 101 ALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR 160 L + + +VE Y+ LLE Y E K + + ++ + Y ++ Sbjct: 68 DLAEKLDYLVENRYYEPELLEQYGFEFVKSLFQRAYKKKFRFETFLGAFKFYTSYTLKTF 127 Query: 161 VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP-T 219 E + +VA L + ++ D + + TP Sbjct: 128 DGKRFLERYEDRVTMVALGLAAGDKA-----LAEKLVDEIIDGRFQPATPTFLNSGKAQR 182 Query: 220 RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCI 279 + SC L+ D+++SI+ ++ ++ + G+ +R G+PI+ E +G I Sbjct: 183 GELVSCFLLRIEDNMESISRAINSALQLSKRGGGVAFALTNVRETGAPIKQIENQSSGVI 242 Query: 280 PFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQI 339 P K + + +Q G R GA ++ H ++ L K E R++ + GV I Sbjct: 243 PVMKLLEDSFSYANQLGARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVI 302 Query: 340 NKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELF 399 + + K ED+ LFSP DV +Y F+D E+ Y + D I+K ++KA E F Sbjct: 303 PDITFELAKKDEDMYLFSPYDVEKVYGMPFSDINVTEKYYEMVD-DARIKKTKIKAREFF 361 Query: 400 SLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN------ 453 + + + +G YI D N +P + + SNLC EI + P Sbjct: 362 QTLAEIQFESGYPYIMFEDTVNRANPIE---GKIIMSNLCSEILQVSTPTTYNENLNYEV 418 Query: 454 DENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDY-PIPAAKRGAMGRRT 512 D G+ C L + N+ + +L +A+RAL A+ D + + + RG Sbjct: 419 DGIGKDISCNLGSMNIAKAMDGGDLGATVEIAIRALTAVSDQSNITAVESVARGNRMSHA 478 Query: 513 LGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNET 571 +G+G +N +LA+ Y + + K A+ ++ ++ASN +AKE+G F + Sbjct: 479 IGLGQMNLHGFLAREHVYYGSPESIDFFGKYMAAVAFHAIRASNLIAKERGVTFDGFERS 538 Query: 572 TYAKGILPIDTYKKDLDTIANE-------------PLHYDWEALRESIKTHGLRNSTLSA 618 YA G D Y E P DWE L+ S+ HG+ N L A Sbjct: 539 KYASGEF-FDKYVTRSWLPTTERGQELFAKFGITLPTIADWEELKASVMEHGIYNQNLQA 597 Query: 619 LMPSETSSQISNATNGIEPPRGYVSIKA-SKDGILRQVVPDY-EHLHDAYELLWEMPGND 676 + P+ + S I+N+T I P + I+ K G P + Y+ +E+ G + Sbjct: 598 VPPTGSISYINNSTASIHPIAAKIEIRKEGKIGRTYFPAPYLTNENLEYYQDAYEI-GYE 656 Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRD 736 + + + +DQ +S + + + K + A+K G+KT+YY R Sbjct: 657 KIVDMYAAATEHVDQGLSLTLFF------KDTATTRDINKAQIYAWKKGIKTIYYIRLRQ 710 Query: 737 GAEDAQDDLVPSIQDDGCESG 757 A + + GC S Sbjct: 711 MALEGT-------EVTGCVSC 724 >UniRef50_P0A5W9 Ribonucleoside-diphosphate reductase subunit alpha n=348 Tax=Bacteria RepID=RIR1_MYCBO Length = 725 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 158/677 (23%), Positives = 281/677 (41%), Gaps = 48/677 (7%) Query: 104 DHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTF-SYAAVKQLEGKYLVQNRVT 162 + + ++ Y+ +L+ Y+ K + + + F ++ + Y ++ Sbjct: 72 EKLDYLIRENYYEREVLDQYSRNFVKTLLDRA-YAKKFRFPTFLGAFKYYTSYTLKTFDG 130 Query: 163 GEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP-TRQ 221 E + ++VA L + + D + + TP + Sbjct: 131 KRYLERFEDRVVMVALTLAAG-----DTALAELLVDEIIDGRFQPATPTFLNSGKKQRGE 185 Query: 222 FSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF 281 SC L+ D+++SI + ++ ++ + G+ + IR G+PI+ E +G IP Sbjct: 186 PVSCFLLRVEDNMESIGRSINSALQLSKRGGGVALLLTNIREHGAPIKNIENQSSGVIPI 245 Query: 282 YKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINK 341 K + A +Q G R GA ++ H ++ L K E R++ + GV I Sbjct: 246 MKLLEDAFSYANQLGARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPD 305 Query: 342 LMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSL 401 + + + +D+ LFSP DV +Y FAD E+ Y + D IRK ++KA E F Sbjct: 306 ITFELAKRNDDMYLFSPYDVERVYGVPFADISVTEKYYEMVD-DARIRKTKIKAREFFQT 364 Query: 402 MMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND----ENG 457 + + + +G YI D N +P D + SNLC EI + P D + G Sbjct: 365 LAELQFESGYPYIMFEDTVNRANPID---GKITHSNLCSEILQVSTPSLFNEDLSYAKVG 421 Query: 458 EIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDY-PIPAAKRGAMGRRTLGIG 516 + C L + N+ + + + +A+RAL A+ D +P+ ++G +G+G Sbjct: 422 KDISCNLGSLNIAKTMDSPDFAQTIEVAIRALTAVSDQTHIKSVPSIEQGNNDSHAIGLG 481 Query: 517 VINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA-CPWFNETTYAK 575 +N YLA+ Y + T+ F + Y+ L+ASN +A E+G F + YA Sbjct: 482 QMNLHGYLARERIFYGSDEGIDFTNIYFYTVLYHALRASNRIAIERGTHFKGFERSKYAS 541 Query: 576 GILPIDTYKKDL-------------DTIANEPLHYDWEALRESIKTHGLRNSTLSALMPS 622 G D Y + D P DW L+ES++ HG+ N L A+ P+ Sbjct: 542 GEF-FDKYTDQIWEPKTQKVRQLFADAGIRIPTQDDWRRLKESVQAHGIYNQNLQAVPPT 600 Query: 623 ETSSQISNATNGIEPPRGYVSIKA-SKDGILRQVVPDY-EHLHDAYELLWEMPGNDGYLQ 680 + S I+++T+ I P V I+ K G + P + YE +E+ G + + Sbjct: 601 GSISYINHSTSSIHPIVSKVEIRKEGKIGRVYYPAPYMTNDNLEYYEDAYEI-GYEKIID 659 Query: 681 LVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED 740 + +DQ +S + + + K + A++ G+KTLYY R A + Sbjct: 660 TYAAATQHVDQGLSLTLFF------KDTATTRDVNKAQIYAWRKGIKTLYYIRLRQMALE 713 Query: 741 AQDDLVPSIQDDGCESG 757 + +GC S Sbjct: 714 GT-------EVEGCVSC 723 >UniRef50_B0KCF5 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=B0KCF5_THEP3 Length = 770 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 132/644 (20%), Positives = 242/644 (37%), Gaps = 129/644 (20%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN---YPRETRLQYVK-RF 196 M + A K LE +YL ++ G+ E+ + ++ VA + Y + ++ VK RF Sbjct: 1 MKITENARKVLEKRYLAKDE-NGKPIETVEEMFERVAKTIAEVDLIYDQNADVEAVKKRF 59 Query: 197 YDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGI 256 YD + +P + P Q S+C ++ GDS++ I G G Sbjct: 60 YDMMVDLDFLPNSPTLMNAGRPLGQLSACFVLPVGDSMEEIFDAVKYAAIIHKSGGGTGF 119 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 + R+R G+ +R +G + F K F A ++ QGG R GA + H ++ Sbjct: 120 SFSRLRPKGATVRSTGGVASGPVSFMKVFNAATEAVKQGGTRRGANMGILRVDHPDILEF 179 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 + K + N + + + V I + + + + L P Sbjct: 180 IQCKK----DNNEITNFNISVAITEEFMKAVEEDREYDLIDPHT---------------- 219 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 R++A E+F L+++ G I +D N +P P + + + Sbjct: 220 ----------GKVVNRLRAREVFDLIVEMAWRNGEPGIVFLDRINEKNPT-PEVGEIEST 268 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------NNLDELEELAILAVR 487 N C E P P C L + NL + + D+L E AV Sbjct: 269 NPCGE--QPLLPYE----------SCNLGSINLENMLKKVEGRYVIDYDKLRETVYDAVH 316 Query: 488 ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 LD ++D YP+P + G R +G+GV+ FA L + G Y A L + E I Sbjct: 317 FLDNVIDANKYPLPQIEEMTKGTRKIGLGVMGFANMLLRLGIPYDSDEAVKLGEELMEFI 376 Query: 548 QYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 +AS +LA+++G +++++ Y K + Sbjct: 377 DETSKEASIKLAEQRGTFGFYDKSIYKKMGIK---------------------------- 408 Query: 608 THGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD------------------ 649 +RN+T + + P+ T S I+ ++GIEP + D Sbjct: 409 ---IRNATTTTIAPTGTISIIAGTSSGIEPVFAIAMTRNVMDNTELVEVNPVFKEVAIER 465 Query: 650 --------------GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISA 695 G L+ + E + + + ++ ++ ++++ QK +D ++S Sbjct: 466 GFYSEELMREIARRGSLKDIKGIPEDVKRVFVIAHDI-DHEWHVKMQAAFQKHVDNAVSK 524 Query: 696 NTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDG 737 N+ + ++ + + L AYK G K T+Y +R+ Sbjct: 525 TVNF------RNEATVEDVRRTYLLAYKLGCKGVTIYRDGSRES 562 >UniRef50_B7R7T8 Ribonucleoside-diphosphate reductase n=2 Tax=Thermoanaerobacteraceae RepID=B7R7T8_9THEO Length = 724 Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats. Identities = 136/619 (21%), Positives = 252/619 (40%), Gaps = 70/619 (11%) Query: 149 KQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLP 208 K +Y +++R + + + ++ VA + +N E + FY +S +K Sbjct: 11 KVFLDRYALKDREGKPVEKKPEEMFKRVAKAIATNEKEE------EMFYKVMSEWKFIPG 64 Query: 209 TPIMSGVRTPTR-QFSSCVLIECG--------DSLDSINATSSAIVKYVSQRAGIGINAG 259 I++G T + +C +I DS +I T + +++ S+ G+GIN Sbjct: 65 GRILAGAGTGREVTYFNCFVIPVEANDPKKGNDSRAAIMDTIAKMLEINSRGGGVGINWS 124 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 +R G+ ++G +G + + QGG R A WH ++E + + Sbjct: 125 TLRPRGAYVKGVGGTSSGAVSWMLAANEVATQVEQGGSRRAALMFMLWDWHPDIEEFIKV 184 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDA-FFADQEEFERL 378 K + +++ + V ++ + + + L P YDA + D E+ Sbjct: 185 KK----DLTKMQQANLSVAVSDAFMEAVAQDKMWKLEFPDTSHPNYDAEWKGDLNEW--- 237 Query: 379 YTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNL 438 K + ++ + + A EL++ ++ + + ++ N S I + +N Sbjct: 238 --KAKGYPTVVYKEIPARELWNKIVTAAWESAEPGVVFLERYNKLSNTY-YITKIISTNP 294 Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELAILAVRALDALL 493 C E+ L +C L A NL A N +ELEE +AVR LD +L Sbjct: 295 CGELGL------------EPYGVCNLGAINLVAFVENGRINFEELEETVKIAVRFLDNVL 342 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 D Y +P K A R +G+G++ A L RY + T + + I+ + Sbjct: 343 DLGAYVLPQNKEMAQKLRRVGLGLMGLADALILMNLRYGSEESLKATEEIVKRIRDAAYR 402 Query: 554 ASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 AS ELAKE+G P F Y KG I P + +R+ I +G+RN Sbjct: 403 ASVELAKEKGPFPEFVADKYLKGQF-----------IQRLP-----KDIRDEIAKYGIRN 446 Query: 614 STLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMP 673 +T+ P+ T+S ++ ++GIEP ++ + G V + + A+ E+ Sbjct: 447 ATILTQAPTGTTSILAGVSSGIEPNFAKEYVRKDRTGT--HTVKHWLADYPAFVSAHEV- 503 Query: 674 GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYY 731 + ++++ ++QK+ID SIS N + + + AY+ G K T+Y Sbjct: 504 TPEEHVKMQAVLQKYIDSSISKTINLPRT------ATVDDIDNIYRLAYELGCKGITVYR 557 Query: 732 QNTRDGAEDAQDDLVPSIQ 750 +R+G + Sbjct: 558 DGSREGVLVTDTKPQEKTK 576 >UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7R7_KORCO Length = 876 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 160/855 (18%), Positives = 300/855 (35%), Gaps = 180/855 (21%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKT----------S 56 V KRDG + +I R ++ A + + + D I + Sbjct: 6 VVKRDGRVVEFDSFRIRRAIEMAMREVGKFD-EAILDKVVKYVLDVIDSTFSDERPPHVE 64 Query: 57 DIHETIIKAA-----------------------ADLISRDAPDY--------QYLAARLA 85 +I + + A + ++ DY A RL Sbjct: 65 EIQDIVELALMKYDLFEVAKAYIVYRKEREKIRKEKMAILGKDYVDDVDKRLSLNAVRLL 124 Query: 86 IF-HLRKKAYGQF--EPPALYDHVVKMV--EMGKYDNHLLEDYTEEEFKQMDTFIDHDRD 140 +L+K G+F +P L+ + +V YD + + E+E + F + Sbjct: 125 ASRYLQKGPDGRFLEDPKGLFIRIASLVVIPDILYDPLIFDKEGEQEVHPTEYFNPEEWA 184 Query: 141 MTFSYAA--------------VKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPR 186 LE + + + + + V+ F + R Sbjct: 185 GKVGLGGGDPENHLAPPFVWNAHHLERMKALYDELNSQGK-------MRVSWSQFFDMLR 237 Query: 187 ETRLQY----VKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSS 242 + R + +Y + K +P + T Q S+C ++ DSL+SI +++ Sbjct: 238 DGRFDHHYKDFLEYYRLMVDLKFIPNSPTLFNAGTMLGQLSACFVLPIEDSLESIMRSAT 297 Query: 243 AIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAA 302 G+GIN ++R G +R +G + F + QGG R GA Sbjct: 298 EAAMIFKSGGGVGINYSKLRPQGDIVRSTGGQASGPVSFMRIIDVITDVVKQGGRRRGAN 357 Query: 303 TLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVP 362 +WH ++ + K G + + + V I + + +G+D L +P + Sbjct: 358 MGILEIWHPDIMKFIEAKAKPGN----LENFNLSVMITEDFWKYYEEGKDYPLINPRN-- 411 Query: 363 GLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNT 422 + E F + + TG + D+ N Sbjct: 412 ------------------------GEVWGSIDPREAFRKIAEMAWRTGDPGVLFADNINR 447 Query: 423 HSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------N 473 + + ++ +N C E P P C L + NL A Sbjct: 448 RNILREHLGEIKSTNPCGE--EPLYPYE----------SCNLGSMNLYAYIRRENGLVTF 495 Query: 474 NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSD 533 + DE A+R LD ++D +PIP ++ R +G+G++ A L Y+ Sbjct: 496 DWDEYSRDIRKALRFLDNIIDVNKFPIPEIEKTTKRTRKVGLGLMGLADTLFALRIPYNS 555 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANE 593 N + E + Y+ + S E AKE+G+ P F E+ Y +G +P++ + E Sbjct: 556 EEGFNFMRRAAEYLTYFAMLESVERAKERGSFPLFPESGYVRGEMPVEGFYH------PE 609 Query: 594 PLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILR 653 + DW+ LRE I +G+RN+ ++ + P+ + S I+ ++GIEP V K G Sbjct: 610 IWNLDWDYLREQIMRNGIRNAEVTTIAPTGSISMIAEVSSGIEPQFALVFEKRVTVGSFF 669 Query: 654 QVVPDY--------------------------------------EHLHDAYELLWEMPGN 675 V ++ E + + + +++P Sbjct: 670 YVDAEFERQLKENGLYSEKILRDIAENGGSLYGIEAPEGKEDVIERMKRIFLVAYDIPWW 729 Query: 676 DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQN 733 D +++ + ++I ++S N V + + K L A++ G+K T+Y Sbjct: 730 D-HIRAEAEISRWICAAVSKTINMP------NWVSVSDIEKAYLFAHRLGLKGITVY--- 779 Query: 734 TRDGAEDAQDDLVPS 748 RDG++ AQ + P+ Sbjct: 780 -RDGSKSAQVLITPT 793 >UniRef50_A3EPA5 Ribonucleoside-diphosphate reductase n=3 Tax=Leptospirillum RepID=A3EPA5_9BACT Length = 732 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 121/641 (18%), Positives = 221/641 (34%), Gaps = 133/641 (20%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS-NYPRETRLQYVKRFYDA 199 + S A+K LE +YL ++ G + E+ + ++ +A + S N R + +Y Sbjct: 7 LNLSDNALKVLEKRYLGKDEA-GIVRENPEQMFRRIADAIASSNSQSSEREFLAEEYYRF 65 Query: 200 VSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAG 259 +++ +P + P Q S+C ++ GDS+ I T A G G + Sbjct: 66 MASLDFLPNSPTIMNAGRPLGQLSACFVLPVGDSMPEIFDTVKATALIHQTGGGTGFSFS 125 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 R+R G+ +R +G + F K + + QGG R GA + H ++ + Sbjct: 126 RLRPKGAVVRSTGGQASGPVSFMKVINASTDAIKQGGTRRGANMGILRVDHPDILEFIDC 185 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 K ++ +V + + V I + + + + L +P + Sbjct: 186 K----MDLTQVTNFNISVAITDVFMQAVKEDGEYDLIAPHN------------------- 222 Query: 380 TKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLC 439 R++A E+F + + G + +D N +P P+ +N C Sbjct: 223 -------GEVVGRLRAREVFDKIAHNAWANGEPGLFFIDTANRANP-TPSRWTYEATNPC 274 Query: 440 LEIALPTKPLNDVNDENGEIALCTLSAFNLGA----------INNLDELEELAILAVRAL 489 E L G C L + NL + + L LAVR L Sbjct: 275 GEQVL------------GPYESCNLGSINLERHVRSSATGKPEVDWERLGRSVYLAVRFL 322 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 D ++D +PIP G R +G+G++ FA L + Y + K I+ Sbjct: 323 DNVVDANRFPIPELAAVNQGTRRIGLGIMGFARLLMRLEIPYDSEEGLEMAEKVMSFIRD 382 Query: 550 YLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH 609 + S +LAK G P++ K Sbjct: 383 EAERTSQDLAKVHGPFPYYEGIGTRK---------------------------------- 408 Query: 610 GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGIL----------------- 652 RNS L + P+ T S I++ ++G EP + K DG Sbjct: 409 --RNSHLLTIAPTGTISMIADTSSGCEPEFSIIWYKNVMDGTHLPYTLEMFEIVARREGF 466 Query: 653 ----------------RQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISAN 696 R + E + ++ ++++ QK+ID ++S Sbjct: 467 WSDGLAEKIVQNHGSCRGLSEVPEKWQKVFATAHDI-APRWHVRMQAAFQKYIDAAVSKT 525 Query: 697 TNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTR 735 N + ++ + L +++ G K T+Y +R Sbjct: 526 INLP------QEATVEDVEDAYLLSFELGCKGITVYRDGSR 560 >UniRef50_B8J271 Ribonucleoside-diphosphate reductase n=11 Tax=Bacteria RepID=B8J271_DESDA Length = 781 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 135/646 (20%), Positives = 237/646 (36%), Gaps = 138/646 (21%) Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFS---NYPRETRL--QYVKRFYDAVSTFK 204 L+ +YL +N + G+I E+ + L+ VAA + + NY +R Q + FYD ++++K Sbjct: 20 VLQKRYLRKN-LDGKIIEAPRDLFWRVAAAIAAQEENYKNSSRTPNQLARDFYDLMTSWK 78 Query: 205 ISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRAL 264 +P + T Q S+C ++ GDS++ I G G + R+R Sbjct: 79 FLPNSPTLMNAGTELGQLSACFVLPVGDSIEEIFDAVKYAAMIHKSGGGTGFSFSRLRPK 138 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 S + +G + F + F TA + QGG R GA + H ++ + K G Sbjct: 139 DSRVGSTGGVASGPVSFLRIFNTATEQIKQGGTRRGANMGILRVDHPDILEFIRAKEKEG 198 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK 384 + + V + + + E L SP++ Sbjct: 199 E----FNNFNLSVGLTESFMQAVENDEQYDLVSPNN------------------------ 230 Query: 385 DDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIAL 444 +R+ A ++F L++++ +G I +D N +P P + +N C E Sbjct: 231 --GEVMKRLPARDVFDLLVRKAWQSGDPGIVFLDRINRDNP-TPDQGEIESTNPCGE--Q 285 Query: 445 PTKPLNDVNDENGEIALCTLSAFNLGAI--------------NNLDELEELAILAVRALD 490 P P C L + NL + DEL + L+VR LD Sbjct: 286 PLLPFE----------ACNLGSINLSCFHVPGHENSADPAAGIDWDELRRVVHLSVRFLD 335 Query: 491 ALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYY 550 ++D +P+ R +G+GV+ FA L + G Y +L + +Q Sbjct: 336 NVIDASRFPLDRIGETVRKNRKIGLGVMGFADLLFQLGVPYDSQQGLDLGERIMAFVQGE 395 Query: 551 LLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHG 610 +AS ELA E+G P + + +A+ L Sbjct: 396 GHRASAELALERGPFPAYGSSVFARKKLGP------------------------------ 425 Query: 611 LRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI-LRQVVPDYEH-------- 661 RN+T++ + P+ T S I+ ++G+EP + DG L ++ P +E Sbjct: 426 YRNATVTTIAPTGTLSIIAGCSSGVEPLFALCFTRNILDGERLVEINPHFEAALESGGLF 485 Query: 662 -----------------------LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTN 698 L + ++ +L++ Q+ D ++S N Sbjct: 486 SHELMDAVVAKGSIQDMDYLPAPLRKTFVTAMDIAPQ-WHLRMQAAFQRHTDNAVSKTVN 544 Query: 699 YDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQ 742 S Q + + AY+ G K T+Y RDG + Q Sbjct: 545 L------SNSATEQDIREIYWLAYQEGCKGVTVY----RDGCKSIQ 580 >UniRef50_C5WF13 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C5WF13_STRDG Length = 728 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 161/696 (23%), Positives = 296/696 (42%), Gaps = 50/696 (7%) Query: 100 PALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTF-SYAAVKQLEGKYLVQ 158 P+L + + +++ G Y+ + + Y ++ K+ + + +D F + + Y ++ Sbjct: 49 PSLEEKLAYLIKEGYYEQAIFDLYPDDVIKEAFQYA-YQQDYRFLNLMGAMKFYQSYALK 107 Query: 159 NRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP 218 E+ + ++ A L + + + + TP Sbjct: 108 TLDGKYYLETVEDRVVMNALFLANG-----DQTLLFNLIKDMLHRRFQPATPTFLNAGKK 162 Query: 219 T-RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTG 277 ++ SC L+ D+++SI+ ++ + G+ + +R +G+PI+ E TG Sbjct: 163 RRGEYISCYLLRIEDNMESISRAIGTSLQLSKRGGGVALCLTNLREIGAPIKEIENQATG 222 Query: 278 CIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGV 337 +P K + + +Q G R GA ++ H EV + L K E R++ + G+ Sbjct: 223 IVPVMKLLEDSFSYANQLGQRQGAGAVYLHAHHPEVLTFLDTKRENADEKIRIKSLALGL 282 Query: 338 QINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVE 397 I + + + +++ LFSP D+ +Y +D E Y K + +I+K + A + Sbjct: 283 VIPDITFQLAKENKEMALFSPYDIKRVYGKDMSDISITEE-YNKLLANPAIKKTYISARK 341 Query: 398 LFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND--- 454 LF L+ + +G Y+ D N +P + SNLC EIA + +D Sbjct: 342 LFQLIAELHFESGYPYLLFDDTVNQRNPH-AQKGRIVMSNLCSEIAQVSTESTYNDDLSF 400 Query: 455 -ENGEIALCTLSAFNLG-AINNLDELEELAILAVRALDALLDYQDYPI-PAAKRGAMGRR 511 + GE C L + N+ A+ + +L ++RALD + D P+ ++G Sbjct: 401 KDIGEDICCNLGSINIAEAMTDAKHFSQLITTSIRALDQVSRASDLSCAPSIEKGNAANH 460 Query: 512 TLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNET 571 +G+G +N +LA + Y A + T F + Y+ KAS +LAKE+GA F + Sbjct: 461 AVGLGAMNLHGFLATNHLYYDSEEAVDFTDLFFHTMAYHAFKASCQLAKEKGAFADFERS 520 Query: 572 TYAKGILPIDTYKKDLDTIANE------------PLHYDWEALRESIKTHGLRNSTLSAL 619 TYA G +D P DW+AL I+T+GL N+ L A+ Sbjct: 521 TYADGSYFKQYVIEDAKPKTKRIAALLKSYGFQLPTVADWKALVRDIQTYGLANAHLLAV 580 Query: 620 MPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYEL----LWEMPGN 675 P+ + S +S+ T ++P V ++ + + R VP Y+ + Y +EM G Sbjct: 581 APTGSISYLSSCTPSLQPVVAPVEVRK-EGNLGRIYVPAYQINQENYAYYERGAYEM-GP 638 Query: 676 DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTR 735 + +++V QK +DQ+IS F + + + L + + A+K ++YY R Sbjct: 639 EPIIKIVAAAQKHVDQAISLTL------FMTDQATTRDLNRSYIQAFKLKCASIYYVRVR 692 Query: 736 DGA--------EDAQDDLVPS--IQDDGCESGACKI 761 ED+Q D V + D E +C I Sbjct: 693 QEVLAGSEQYDEDSQLDSVDKNGLTDTINECQSCMI 728 >UniRef50_P26685 Ribonucleoside-diphosphate reductase large subunit n=7 Tax=African swine fever virus RepID=RIR1_ASFM2 Length = 779 Score = 517 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 189/803 (23%), Positives = 308/803 (38%), Gaps = 92/803 (11%) Query: 22 IHRVLDWAAEGLH-NVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYL 80 I + L A G NV ++++ + G +I + L + DY L Sbjct: 6 IVKKLASATYGKALNVDLNKLLQALNHHSLQG---------LISYCSAL-TILHYDYSTL 55 Query: 81 AARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQ---MDTFIDH 137 AARL+++ L + F ++ + + L + + +K D++ID+ Sbjct: 56 AARLSVYLLHQSTASSFSKAVS-------LQAAQSCSRLSSHFVDVVYKYKAIFDSYIDY 108 Query: 138 DRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFY 197 RD S ++ ++ YL++N+ G I E Q Y+ VA + R ++ + Y Sbjct: 109 SRDYKLSLLGIETMKNSYLLKNK-DGVIMERPQDAYMRVAIMIHG-MGRVVNMKMILLTY 166 Query: 198 DAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGIN 257 D +S I+ +P M T Q SSC L+ D+L+++ GIG+ Sbjct: 167 DLLSRHVITHASPTMFNAGTKKPQLSSCFLLNVNDNLENLYDMVKTAGIISGGGGGIGLC 226 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 IRA S I G G + + +QGG+R GA ++ +WH ++ + L Sbjct: 227 LSGIRAKNSFISGSGLRSNGIQNYIVLQNASQCYANQGGLRPGAYAVYLELWHQDIFTFL 286 Query: 318 V---LKNNRGVEGNRVRHMDYGVQINKLMYTRLLK------GEDITLFSPSDVPGLYDAF 368 LK + ++ YG+ + L L LFSP P L+ F Sbjct: 287 QMPRLKGQMAEQRLNAPNLKYGLWVPDLFMEILEDQIHNRGDGTWYLFSPDQAPNLHKVF 346 Query: 369 FADQ-------EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCN 421 ++ EF++LY +Y + A E+ + G YI D N Sbjct: 347 DLERSQHENAHREFKKLYYQYVAEKRYTGVT-TAKEIIKEWFKTVVQVGNPYIGFKDAIN 405 Query: 422 THSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NNLD 476 S + + SNLC+EI +P N+ E +C L+A NL A + Sbjct: 406 RKSNL-SHVGTITNSNLCIEITIPCWEGNEA-----EQGVCNLAAVNLAAFIRESSYDYR 459 Query: 477 ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 L E A LD ++D YP A +R M R +GIGV A A ++ A Sbjct: 460 GLIEAAGNVTENLDNIIDNGYYPTEATRRSNMRHRPIGIGVFGLADVFASLKMKFGSPEA 519 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 + A+ Y ++ S ELAKE+G+ P F + +KG+L D + + D I + Sbjct: 520 IAIDEAIHAALYYGAMRRSIELAKEKGSHPSFPGSAASKGLLQPDLWVRCGDLIPSWENR 579 Query: 597 -----------YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIK 645 W LR + G+RN L+ALMP+ TSS + EP + + Sbjct: 580 VAQTTQGVLTPKKWWQLRLA-AIQGVRNGYLTALMPTATSSNSTGKNECFEPFTSNLYTR 638 Query: 646 ASKDGILRQVVPDYEHLHDAYEL-LWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRF 704 + G + D E+ LW L G +Q +D Y SR Sbjct: 639 RTLSGEFIILNKYLMD--DLEEINLWSEDIQQQLLNAGGSIQHILDIPAEIRERYKTSRE 696 Query: 705 PSGKV-------------------------PMQQLLKDLLTAYKFGVKTL-YYQNTRDGA 738 + K+ + Q+L L+ +K G+ T YY + GA Sbjct: 697 MNQKILTKHAAARNPFVSQSMSLNYYFYEPELSQVLTVLVLGWKKGLTTGSYYCHFSPGA 756 Query: 739 EDAQDDLVPSIQDDGCESGACKI 761 + + S + + AC + Sbjct: 757 GTQKKIIRNSEKACNADCEACLL 779 >UniRef50_Q6R7H4 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Ostreid herpesvirus 1 RepID=RIR1_OSHV1 Length = 835 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 169/786 (21%), Positives = 319/786 (40%), Gaps = 111/786 (14%) Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYD------ 116 + A + PDY +LA R++ + + F + G Sbjct: 70 LDMAITPLIPSHPDYAFLAGRVSAYMTQINTPKTFTDAVYGIQMAVGETNGFRSPMKPVK 129 Query: 117 ---NHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLY 173 + + D+ E ++D ID RD + +Y + L ++ V ++YE Q+++ Sbjct: 130 GGLSDEIVDFVNEHGARLDGMIDDVRDYSHNYMGITGLLNGVAIK--VNKKLYERPQYVF 187 Query: 174 ILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDS 233 + VA + ++ ET L+ + + Y +S +S+ +P++ T + +SC L++ GD+ Sbjct: 188 MRVAMAM-TDLSSETALEDIWQTYMLISGQCLSMASPVLFNGGTSSSNTASCFLLDMGDN 246 Query: 234 LDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCS 293 + SI + + +++ GIGIN ++RA GS I G +G F +S Sbjct: 247 MVSITKKVAQTMTLIAKNGGIGINFSKLRATGSKI-GMAGKSSGIGGKLNLFDRVAQSVD 305 Query: 294 QG-GVRGGAATLFYPMWHLEVESLLVLK-NNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 QG R GA + WH ++ L + + G E N+ ++ G+ ++ L R+ + Sbjct: 306 QGENKRPGAIAGYLTDWHADMYDWLYSRYSGSGNEVNKRHVLNMGLVMSDLFMERVENDK 365 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR 411 + +LFSP+DV GL + + E+F R Y +E + I++ V A +LFS + STG Sbjct: 366 EWSLFSPNDVVGLEELY---GEKFVRAYRAHEANPKIKRTTVSARKLFSDIANMMWSTGE 422 Query: 412 IYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGA 471 YI D N S + ++ SNLC EI + EIA+C L+ + Sbjct: 423 PYILFKDAVNERSNHK-HLGTIKNSNLCCEIVQYC--------DTNEIAVCNLATICVSN 473 Query: 472 IN-------NLDELEELAILAVRALDALLDYQDYPI-------------PAAKR------ 505 + + + + A +A + ++ L+D Q+Y + Sbjct: 474 FVNVETGEIDFEGIADAAGVACKGINNLIDKQNYDLGNEQLMRLADERTEEVVEVNGIKF 533 Query: 506 ---------GAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASN 556 + R GIG+ K Y A L EAI Y ++ S Sbjct: 534 DAKYNLVSYSNLKHRPQGIGMQGLHDVFMKLKIPYDSEMAFRLAALIQEAIYYGAVRESV 593 Query: 557 ELAKEQGACP--WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNS 614 ++A+E+G P +++ T+ +G L D + ++W + + + G+ NS Sbjct: 594 KIAEEKGPYPSYYWDNNTHREGKLQFDFLEGFDRDRDLTHELFNWREVLKKFEKFGINNS 653 Query: 615 TLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGIL---------------------- 652 ++A PS +SSQ+++ IE K KDG Sbjct: 654 VVTAQPPSASSSQLNDNVESIEAITSNRFTKGIKDGKFIIINKHLQKDLEDLGMWDAQMV 713 Query: 653 ----------RQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPS 702 + + +++ + Y+ E+ + +++ +Q FIDQ+IS N Sbjct: 714 GDIEANDGSIQNIERIPKNIREIYKTAREI-DHKAVVKICAAIQPFIDQTISKNMFVP-- 770 Query: 703 RFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAE---------DAQDDLVPSIQDD 752 + P+Q ++++++ +K +KT +YY + +D P + Sbjct: 771 --KNVDNPVQLIMENVILGHKMKLKTGMYYTRGIPAMKQQNFGKMNFQDKDIGKPVPELV 828 Query: 753 GCESGA 758 CE+ + Sbjct: 829 DCEACS 834 >UniRef50_B5Y7X0 Ribonucleoside-diphosphate reductase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7X0_COPPD Length = 796 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 130/662 (19%), Positives = 232/662 (35%), Gaps = 134/662 (20%) Query: 140 DMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP-----RETRLQYVK 194 ++ +S A++ LE +YL+++ G I E+ + L VA L E + Sbjct: 2 ELEWSETALRVLEQRYLLRDE-NGNIVETPEQLMHRVAHGLAQIETVWGATSEQISSVEQ 60 Query: 195 RFYDAVSTFKISLPTPIMSGVRTP-------TRQFSSCVLIECGDSLDSINATSSAIVKY 247 F+D + TP + P R S+C+++ DS+D I T K Sbjct: 61 DFFDILWKRDFLPNTPTLFHAGLPKDPKYRGRRFMSACIVLPIEDSIDGIFKTLWDAAKI 120 Query: 248 VSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYP 307 + G+G R+R GS ++ +G + F + V +QGG R GA Sbjct: 121 MQAGGGVGYAFSRLRPKGSLVKSSGGKSSGPVSFMHIYDVMVDVVAQGGKRRGAQMGVLN 180 Query: 308 MWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDA 367 + H ++ + K + + + V + + + L +P Sbjct: 181 VHHPDILEFIDAKKENTSGQGPLHNFNISVAVTEEFVQAYKEDTTFKLVAPHT------- 233 Query: 368 FFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD 427 + A E+ + + TG I +D N D Sbjct: 234 -------------------GEVVGELNAREVMHKIAENAWRTGDPGIIFIDRINQLDYLD 274 Query: 428 PAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL---------GAINNLDEL 478 + +N C E LP C L + NL G + ++ Sbjct: 275 D--GRIEATNPCGEQPLPP------------YGSCNLGSINLKHMLKKTDSGYQWDWEKF 320 Query: 479 EELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 + LAVR LD +++ DYPIP + A R +G+GV+ +A L+ G Y A Sbjct: 321 QRTIRLAVRFLDNVIEANDYPIPELEDYAKKARRIGLGVMGWADALSLLGIPYDSEEALE 380 Query: 539 LTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYD 598 K ++ AS ELA+E+G +++++ + + +P Sbjct: 381 EARKVGAFLKEKSHLASQELAQERGVFEFYDQSKWKELGIP------------------- 421 Query: 599 WEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVP- 657 +RN+ ++ + P+ T S ++N +GIEP + G +V P Sbjct: 422 ------------MRNAAVTTIAPTGTLSILANVNSGIEPYFALAFERKITAGTFHEVQPT 469 Query: 658 -------------------------------DYEHLHDAYELLWEMPGNDGYLQLVGIMQ 686 E + +A+ E+ + ++++ Q Sbjct: 470 LLDVLKERELYSEELVQRIIENEGKLRDLEDLPEDIRNAFPTAMEV-APEWHVRMQAAWQ 528 Query: 687 KFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLV 746 + ID SIS N ++ + L AY+ G K++ RD + + Q V Sbjct: 529 ENIDSSISKTVNLPYQS------TVEDIENIYLLAYELGTKSITVY--RDKSLELQVLNV 580 Query: 747 PS 748 PS Sbjct: 581 PS 582 >UniRef50_Q3ZZA0 Ribonucleoside-diphosphate reductase n=27 Tax=cellular organisms RepID=Q3ZZA0_DEHSC Length = 761 Score = 513 bits (1322), Expect = e-144, Method: Composition-based stats. Identities = 122/657 (18%), Positives = 231/657 (35%), Gaps = 132/657 (20%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY----PRETRLQYVKRF 196 + + A+ LE +YL +++ G+ E+ + ++ VA + P+ F Sbjct: 20 LKLTDNAMCVLERRYLKKDK-QGKTTETVEDMFRRVARTIAMGELIYNPKADVRSREDEF 78 Query: 197 YDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGI 256 ++ ++ + +P + Q S+C ++ DS++SI G G Sbjct: 79 FNLMTRLEFLPNSPTLMNAGRELGQLSACFVLPVDDSIESIFDAVKHTAMIHKSGGGTGF 138 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 + R+R + +G + F + F A QGG R GA + H ++ Sbjct: 139 SFSRLRPEQDRVGTTGGVASGPVSFMRAFDVATDVIKQGGTRRGANMAILSIDHPDIMKF 198 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 + K+ GV + + + V I + G D L +P + Sbjct: 199 VHAKDKAGV----LTNFNLSVAITDKFMQAVKDGVDYDLLNPHN---------------- 238 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 + A E+F+ ++ TG I +D N ++P P + + + Sbjct: 239 ----------GEVVSSLNASEVFNKIVHMAWKTGDPGIVFIDRINAYNP-TPQLGRIEST 287 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------NNLDELEELAILAVR 487 N C E P P C L + NL + + +L + AVR Sbjct: 288 NPCGE--QPLLPYE----------SCNLGSINLSRMVTVSGGQNTVDYKKLSRVIKSAVR 335 Query: 488 ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 LD ++D +P+P R +G+GV+ FA L + G Y+ ++ L + + Sbjct: 336 FLDNVIDVNKFPLPQIDEMTKKSRKIGLGVMGFADMLLELGVPYNSENSIKLAEEIMCFV 395 Query: 548 QYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 K S+ELA E+G P + + Y K P Sbjct: 396 NDEAHKFSSELAVERGVFPAYRGSIYEKSGRP---------------------------- 427 Query: 608 THGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG-ILRQVVPDYE------ 660 +RN++ + + P+ T S I+ ++GIEP + DG + +V P +E Sbjct: 428 ---MRNASCTTIAPTGTLSIIAGCSSGIEPHFALCFTRNILDGTKMIEVNPYFERAAKEG 484 Query: 661 ------------------------HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISAN 696 D + ++ + ++++ QK D ++S Sbjct: 485 GYYSEELIKSLAEGAHLDEVDVPQDAKDLFVTAHQIV-PEWHVRIQAAFQKCTDNAVSKT 543 Query: 697 TNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQD 751 N+ S + + A+ +K T+Y RDG+ + Q ++ Sbjct: 544 VNF------SRDAGECDVAEVYKMAHARNLKGITIY----RDGSREDQPMSTGKAEN 590 >UniRef50_D1CDG6 Ribonucleoside-diphosphate reductase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDG6_THET1 Length = 811 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 131/653 (20%), Positives = 241/653 (36%), Gaps = 92/653 (14%) Query: 124 TEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN 183 E+ +++ ID R K +Y ++ + + +++ VA + + Sbjct: 15 IEDLEREVQALIDSGRATKLEGYREKIFLDRYARKDPNGTPLEHYPEEMWLRVAKAIAAV 74 Query: 184 YP-RETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR-QFSSCVLIE-CGDSLDSINAT 240 P E + Q+ RFYD + F+ I+SG + + +C +I DS++ I Sbjct: 75 EPNPEAQRQWTLRFYDILQGFRFVPGGRILSGAGSGAEVTYYNCFVIPSPEDSVEGIFRN 134 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAV-KSCSQGGVRG 299 + + + G+G+N +R G+ I+ +G + + K QGG R Sbjct: 135 ITTAAHIMRRSGGVGVNLSSLRPRGAYIKTVNGTSSGPCSWAILYSDMTGKVIIQGGSRR 194 Query: 300 GAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPS 359 GA + H ++E + K + H + V ++ + K L Sbjct: 195 GALMIMLDDDHPDIEEFVEYKRKN---PGHIDHANLSVAVSDAFMEAVKKDLPWDL---- 247 Query: 360 DVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDH 419 K + ++A +L+ + + + + +D Sbjct: 248 ------------------------KWQGKVWKTIRARDLWRKIAESAWAYAEPGLVFIDR 283 Query: 420 CNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------- 472 N S +R N C E LP +C L A NL A Sbjct: 284 YNKRSNT-WYFENIRCVNPCGEQGLPPW------------GVCNLGALNLLAFVKHIDGE 330 Query: 473 --NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAM-GRRTLGIGVINFAYYLAKHGK 529 + ++L A +A+R LD ++D YP P + G R G+G + A L K G Sbjct: 331 TYFDFEDLANTARVAIRFLDNVIDATVYPFPENEEAQKHGARRTGLGTMGLADVLIKLGV 390 Query: 530 RYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDT 589 +Y A L + + I+ AS +LA E+G P F+ Y +G + Sbjct: 391 KYGSPEAEPLVERIYRTIRDAAYDASADLAAEKGPFPKFDRDKYMQGEFIRELP------ 444 Query: 590 IANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD 649 E ++ I+ G+RN+ L P+ T+S ++ +GIEP +V+ + + Sbjct: 445 ----------EEIQAKIRRQGIRNAVLLTQAPTGTTSSLAGVNSGIEPVFAFVTKRRDRL 494 Query: 650 GILRQVVPDYEH---------LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYD 700 G P + L D + ++ + ++++ ++QK+ D SIS N Sbjct: 495 GEHLLYHPLAQEWMDAHPGKPLPDYFVSSADL-TPEEHIRIQAVVQKYTDSSISKTVN-- 551 Query: 701 PSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQD 751 ++ + + + AY G K T Y Q +RD +A D + Sbjct: 552 ----GPEDNTVEDVERLYMLAYDTGCKGITYYRQGSRDAVLEAVDTKPKEKAE 600 >UniRef50_P50620 Ribonucleoside-diphosphate reductase subunit alpha n=170 Tax=root RepID=RIR1_BACSU Length = 700 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 140/661 (21%), Positives = 274/661 (41%), Gaps = 36/661 (5%) Query: 101 ALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTF-SYAAVKQLEGKYLVQN 159 L + + +VE Y+ L Y+ E+ K++ + + F S+ + + Y ++ Sbjct: 50 NLKEKLDYLVENQYYEEEFLSLYSFEDIKEVFKTA-YAKKFRFPSFMSAFKFYNDYALKT 108 Query: 160 RVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPT 219 +I E + +VA + + K + + + + TP Sbjct: 109 NDKKKILERYEDRISIVALFFANG-----DTEKAKEYVNLMINQEYQPSTPTFLNAGRKR 163 Query: 220 -RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 + SC L+E DSL+ I+ ++ G+ +N ++RA G I+ E G Sbjct: 164 RGELVSCFLLEVNDSLNDISRAIDISMQLSKLGGGVSLNLSKLRAKGEAIKDVENATKGV 223 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 + K A + Q G R G+ + ++H ++ L K E RV+ + GV Sbjct: 224 VGVMKLLDNAFRYADQMGQRQGSGAAYLNIFHRDINDFLDTKKISADEDVRVKTLSIGVV 283 Query: 339 INKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVEL 398 I + + +F P + Y D+ + +Y K+ + ++K+++ +L Sbjct: 284 IPDKFVELAREDKAAYVFYPHTIYKEYGQHM-DEMDMNEMYDKFVDNPRVKKEKINPRKL 342 Query: 399 FSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN----D 454 + R+ +G YI D+ N + I+ V+ SNLC E+ ++ + + D Sbjct: 343 LEKLAMLRSESGYPYIMFQDNVNKVHA-NNHISKVKFSNLCSEVLQASQVSSYTDYDEED 401 Query: 455 ENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDY-PIPAAKRGAMGRRTL 513 E G C L + N+ + +E+ LA +L + + D PA +R +++ Sbjct: 402 EIGLDISCNLGSLNILNVMEHKSIEKTVKLATDSLTHVSETTDIRNAPAVRRANKAMKSI 461 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNETT 572 G+G +N YLA++G Y A + + F + +Y ++ S E+AKE+G + +T Sbjct: 462 GLGAMNLHGYLAQNGIAYESPEARDFANTFFMMVNFYSIQRSAEIAKEKGETFDQYEGST 521 Query: 573 YAKGILPIDTYKK-----------DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMP 621 YA G D Y +L + P DW+ L+ + HG+ +S + P Sbjct: 522 YATGE-YFDKYVSTDFSPKYEKIANLFEGMHIPTTEDWKKLKAFVAEHGMYHSYRLCIAP 580 Query: 622 SETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHD-AYELLWEMPGNDGYLQ 680 + + S + ++T + P + + + +P + Y+ ++M + Sbjct: 581 TGSISYVQSSTASVMPIMERIEERTYGNSKTYYPMPGLASNNWFFYKEAYDMDMFK-VVD 639 Query: 681 LVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED 740 ++ +Q+ IDQ IS F + + L + L A+ G+KT+YY T+D +D Sbjct: 640 MIATIQQHIDQGISFTL------FLKDTMTTRDLNRIDLYAHHRGIKTIYYARTKDTGQD 693 Query: 741 A 741 + Sbjct: 694 S 694 >UniRef50_B5YGJ2 Ribonucleoside-diphosphate reductase n=12 Tax=cellular organisms RepID=B5YGJ2_THEYD Length = 584 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 131/638 (20%), Positives = 241/638 (37%), Gaps = 123/638 (19%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP--RETRLQYVKRFYD 198 M F+ A LE +YL++N GE E+ + L+ V++ + ++ ++ ++F++ Sbjct: 1 MIFTDRAKTVLEIRYLLKNE-KGEPIENPEQLFQRVSSYIAQAEKIYKKNSFEWEEKFHE 59 Query: 199 AVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINA 258 +S+ + +P + P Q ++C ++ DS++SI T + G G N Sbjct: 60 LISSLRFLPNSPALMNAGKPKAQLAACFVLPIEDSIESIFKTLKDAALILQSGGGTGFNF 119 Query: 259 GRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLV 318 +R G +R +G + F K F A QGG R GA + H ++ + Sbjct: 120 SSLRPKGDVVRSTGGVASGPVSFMKIFDKASDIIKQGGARRGANMGVLRVDHPDIFEFIR 179 Query: 319 LKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERL 378 +K + + + V + L K + L +P Sbjct: 180 IKRIES-----LSNFNISVAVTDSFMEALFKNDYFPLINPRT------------------ 216 Query: 379 YTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNL 438 ++VKA ++F +++ TG + +D N +P P I + +N Sbjct: 217 --------KEVVRKVKAKDIFDEIVESAWETGDPGVIFIDTINRSNP-TPHIGQIDSTNP 267 Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELAILAVRALDALL 493 C E P P C L + NL + + LE A R LD + Sbjct: 268 CGE--QPLLPYE----------ACILGSLNLSKYVKEGKIDFERLEHDVKTATRFLDDAI 315 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 D YP+P ++ G R +G+G++ +A L + G Y+ A L + + I K Sbjct: 316 DVTHYPVPEVEKMHKGNRKIGLGIMGWADCLVELGIPYNHKKALALAEQVMQFISEKSHK 375 Query: 554 ASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 AS ELA+E+G P F + + K +P +RN Sbjct: 376 ASQELAQERGVFPNFKGSVWEKKGIP-------------------------------MRN 404 Query: 614 STLSALMPSETSSQISNATNGIEPPRGYVSIKASKD------------------------ 649 +T + + P+ T S I++ ++GIEP + D Sbjct: 405 ATTTTIAPTGTISIIADCSSGIEPYFLLAYKQRILDTEFEIINKYLIEIAQKQGFYSEDF 464 Query: 650 -------GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPS 702 G LR + + ++ E+ + ++Q+ QK+ D ++S N Sbjct: 465 INQLRQKGTLRGMKEVPLRIKRLFKTALEI-TPEEHIQMQASFQKYTDNAVSKTINL--- 520 Query: 703 RFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGA 738 S + + + + + AYK G+K T++ ++ G Sbjct: 521 ---SQRTRKEDVARIFILAYKKGLKGITIFRYGSKRGT 555 >UniRef50_P78027 Ribonucleoside-diphosphate reductase subunit alpha n=50 Tax=Bacteria RepID=RIR1_MYCPN Length = 721 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 160/684 (23%), Positives = 284/684 (41%), Gaps = 47/684 (6%) Query: 101 ALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR 160 + + + +V+ YD +++ Y+ E+F+++ R ++ + Y ++ Sbjct: 56 STKERLDFLVKNDYYDENIINMYSFEQFEEITRKAYAYRFRYANFMGAFKFYNAYALKTF 115 Query: 161 VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP-T 219 E+ + ++ L + + + + T + TP Sbjct: 116 DGKWYLENYEDRVVMNVLFLANGNYNK-----ALKLLKQIITNRFQPATPTFLNAGRKKR 170 Query: 220 RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCI 279 +F SC L+ D+++SI + ++ + G+ + IR G+PI+ E +G I Sbjct: 171 GEFVSCYLLRIEDNMESIGRAITTTLQLSKRDGGVALLLTNIRESGAPIKKIENQSSGII 230 Query: 280 PFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQI 339 P K + + +Q G R GA ++ H +V L K E R++ + G+ I Sbjct: 231 PIMKLLEDSFSYANQLGQRQGAGAVYLHAHHPDVMQFLDTKRENADEKIRIKSLSLGLVI 290 Query: 340 NKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELF 399 + +T E++ LFSP DV Y +D E Y + I+K + A + F Sbjct: 291 PDITFTLAKNNEEMALFSPYDVYEEYGKPLSDISVTEMYYELL-ANQRIKKTFINARKFF 349 Query: 400 SLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND----E 455 + + +G YI D N + + SNLC EI P+ P +D + Sbjct: 350 QTVAELHFESGYPYILFDDTVNRRNA---HPNRIVMSNLCSEIVQPSTPSEFHHDLAFKK 406 Query: 456 NGEIALCTLSAFNLG-AINNLDELEELAILAVRALDALLDYQDYPI-PAAKRGAMGRRTL 513 G C L + N+ A+ + E EL LA+ +LD + + P+ ++G L Sbjct: 407 VGNDISCNLGSLNIAKAMESGPEFSELVKLAIESLDLVSRVSNLETAPSIQKGNSENHAL 466 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTY 573 G+G +N +LA + Y+ A + T+ F + Y+ KAS+ELA E+G F T + Sbjct: 467 GLGAMNLHGFLATNQIYYNSPEAIDFTNIFFYTVAYHAFKASSELALEKGKFKNFENTKF 526 Query: 574 AKGILPIDTYKKDLDTIA----------------NEPLHYDWEALRESIKTHGLRNSTLS 617 A G D Y K P +W+ L +I+ +GL NS L Sbjct: 527 ADGS-YFDKYIKVEPDFWTPKTERVKALFQKYQVEIPTRENWKELALNIQKNGLANSHLL 585 Query: 618 ALMPSETSSQISNATNGIEPPRGYVSIKASKDGIL-RQVVPDYEHLHDAYELLWE---MP 673 A+ P+ + S +S+ T ++P V ++ K+G L R VP Y+ D+Y + Sbjct: 586 AIAPTGSISYLSSCTPSLQPVVSPVEVR--KEGRLGRIYVPAYQLNKDSYPFYKDGAYEL 643 Query: 674 GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQN 733 G + + + Q+ +DQ+IS F + K + L K + A+K G ++YY Sbjct: 644 GPEPIINIAAAAQQHVDQAISLTL------FMTDKATTRDLNKAYIYAFKKGCSSIYYVR 697 Query: 734 TRDGAEDAQDDLVPSIQDDGCESG 757 R +D +IQ CE+ Sbjct: 698 VRQEV--LEDSEDHTIQMQQCEAC 719 >UniRef50_C1A6X4 Ribonucleoside-diphosphate reductase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6X4_GEMAT Length = 859 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 118/663 (17%), Positives = 229/663 (34%), Gaps = 114/663 (17%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQ-----YVKRFY 197 S A LE +YLV+++ +G+ E + ++ VA + R + FY Sbjct: 14 LSANARTVLEKRYLVKDK-SGKPVEKPEDMFWRVATTVAEADRRYGASDGAVQAIAEEFY 72 Query: 198 DAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLD----SINATSSAIVKYVSQRAG 253 ++ + +P + P Q S+C ++ D+L I T ++ G Sbjct: 73 FLMTQRRFEPNSPTLMNAGRPLGQLSACFVLPVDDALSNGQSGIYDTLRSMALIHQSGGG 132 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 G + R+R+ GS +R +G + F + + + + QGG R GA + H +V Sbjct: 133 TGFSFSRLRSRGSMVRSTTGVASGPVSFMQLYDASTDAVKQGGTRRGANMGILRVDHPDV 192 Query: 314 ESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQE 373 + K + ++ + + V I + + L P Sbjct: 193 MEFIACKE----DLTKITNFNISVGITTKFMDAVKADANYDLVDPVS------------- 235 Query: 374 EFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPV 433 ++A E++ M+ TG + +D N ++P P + Sbjct: 236 -------------KKVTGELRAREVWDKMILGAWRTGEPGVFFIDEANRYNPV-PHLGDY 281 Query: 434 RQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELAILAVRA 488 +N C E L +C L + N+G + + + L+ Sbjct: 282 EATNPCGEQPLLAYD------------VCNLGSVNVGHYVSNGVVDWEAMRRDIALSTHF 329 Query: 489 LDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQ 548 LD ++D YP+P + R +G+GV+ FA L + G Y + K E + Sbjct: 330 LDNIIDVNKYPLPEIDALSKRIRRIGLGVMGFADMLVRLGIPYDSAEGVEMGRKVMEFLD 389 Query: 549 YYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKT 608 K S LA+E+GA P + ++ + P +T +D + P+ Sbjct: 390 VEGKKESERLARERGAFPEWAQSIWG----PDETCARDANGQRIRPMQL----------- 434 Query: 609 HGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY--------- 659 LRN ++ + P+ T S I+ ++G+EP ++ ++ V D+ Sbjct: 435 --LRNCNVTTVAPTGTISIIAGCSSGLEPLFAVAFMRNQAGVMMPDVNEDFVAIAKAEGW 492 Query: 660 ---------------------EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTN 698 + + + ++++ Q D +IS TN Sbjct: 493 YSDELMERIAKTGSVQHAEVPAKWQSVFNTANNI-SPEYHIRMQAAYQLHCDSAISKTTN 551 Query: 699 YDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDGCES 756 + + + + AY+ K T+Y +RD + + + Sbjct: 552 FGFA------ATVDDVRAIYEMAYEMKCKGVTVYRDGSRDNQVLSTGATQDAAANRESAK 605 Query: 757 GAC 759 A Sbjct: 606 AAV 608 >UniRef50_Q67KQ2 Ribonucleoside-diphosphate reductase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KQ2_SYMTH Length = 776 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 120/673 (17%), Positives = 226/673 (33%), Gaps = 145/673 (21%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPR-----ETRLQYVKR 195 M ++ A +E +YL E+ + VA + + + + +R Sbjct: 1 MELTHIAKTVMEKRYLRMKEDGTR--ETPDEMLRRVARVIAAVEEKYGASKKEIRAVEER 58 Query: 196 FYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIG 255 FY + +P +G T Q S+C ++ GDSL I T G G Sbjct: 59 FYQLMDRQDFMPNSPTFTGAGTALGQLSACFVLPVGDSLPEIYETMKQAALIHQTGGGTG 118 Query: 256 INAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVES 315 R+R G +R + +G + F + + + ++ QGG R GA + H ++ Sbjct: 119 FAFSRLRPAGDVVRSSQGVASGPVSFLRVYNASTEAIKQGGTRRGANMGILRVDHPDILQ 178 Query: 316 LLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEF 375 + K + ++ + + V I L KG + L +P + Sbjct: 179 FIESK----ADITQITNFNISVAITDAFMEALEKGTEYELINPRN--------------- 219 Query: 376 ERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQ 435 ++ A ++ +++ TG I +D N +P + + + Sbjct: 220 -----------GEVTGKLSAKLVWDKLVENAWKTGEPGIVFIDRINRRNP-NNHVEVIEA 267 Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILA 485 +N C E LP C L + NL + + L E+A A Sbjct: 268 TNPCGEQPLPP------------YGSCNLGSINLANFVKNPYTDRAEVDWERLGEVARTA 315 Query: 486 VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFE 545 R LD ++D YP+P A+ R +G+G++ +A L + G Y A L ++ Sbjct: 316 TRFLDNVIDANKYPLPQIAEKALRDRRIGLGIMGWAEMLVQMGLPYDSEEAVALGNRVMT 375 Query: 546 AIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRES 605 I+ L+ S LA+ +G P + + + K L Sbjct: 376 FIKQKALEESMALAEVRGPYPEWEGSQWHKAGLK-------------------------- 409 Query: 606 IKTHGLRNSTLSALMPSETSSQISN-----ATNGIEPPRGYVSIKASKD----------- 649 +RN+TL+ + P+ T S + + GIEP V + Sbjct: 410 -----VRNATLTTVAPTGTISLFAARPDLPCSGGIEPKFALVFTRNQAGALMLDVDGQFA 464 Query: 650 --------------------GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIM---- 685 G R V E + ++ + ++++ Sbjct: 465 SIARREGWYSDELMQQVADRGTARGVSGVPEKWQRIFATSHDI-TPEWHVRMQAAFQGGD 523 Query: 686 -----QKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGA 738 Q+ +D ++S N+ ++ + K A++ G+K T+Y +R Sbjct: 524 GLPVDQQPVDAAVSKTINFPH------HATVEDVGKSYALAWQLGLKGITVYRDGSRASQ 577 Query: 739 EDAQDDLVPSIQD 751 D ++ Sbjct: 578 VLTTGDKTKKQEE 590 >UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=Thermococcus RepID=C5A3W2_THEGJ Length = 911 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 157/839 (18%), Positives = 284/839 (33%), Gaps = 168/839 (20%) Query: 7 VTKRDGSTERINLDKIHRVLDWAA------EGLHNVSISQVELRSHIQFYDGIK--TSDI 58 V KRDG + ++I + A + + + +R + YDG +I Sbjct: 6 VMKRDGRIVPFDRERIRWAIKRAMLEVGVHDDKLLNRVVRRVVRRINELYDGQVPHIENI 65 Query: 59 HET----IIKAAADLISRDAPDYQY--------------------------------LAA 82 + +++A +++ Y+ LA+ Sbjct: 66 QDIVELELMRAGLFEVAKAYILYRKKKAEIREEKKKILNKDRLDEIDKRFSLNALRVLAS 125 Query: 83 RLAIFH-----------LRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE-DYTEEEFKQ 130 R I + L ++ P L + GK++ L Y E F++ Sbjct: 126 RYLIRNEKGEIIESPRELFERVATLAVIPDLLYDERVYDKNGKHEQDLSRVKYYLEHFEE 185 Query: 131 MDTF--IDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRET 188 D I + + + + L + + R+ I E ++ F +Y E Sbjct: 186 FDGRYSIGRFKLNKYHFERLVNLYRELAEKGRMKVSIDE----FLGMLENGAFDDYESE- 240 Query: 189 RLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYV 248 V+ ++ ++ TP + P S+C ++ D ++SI + + Sbjct: 241 ----VEEYFRLMTGQVFMPNTPALINSGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQ 296 Query: 249 SQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPM 308 G G+N ++R G + +G + F QGGVR GA + Sbjct: 297 KSGGGTGLNFSKLRPEGDFVGSTAGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEV 356 Query: 309 WHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF 368 WH ++E + K + N + + + V I + + L G+ L +P + Sbjct: 357 WHPDIEKFIHAKEKN-IGTNVLSNFNISVGIWEDFWEALRDGKRYPLVNPRTGEKV---- 411 Query: 369 FADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 + + LF + S + D N + +P Sbjct: 412 ----------------------KEIDPKSLFEELAFMAWSKADPGVIFFDVINRRNVLEP 449 Query: 429 A-IAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDE 477 A P+R +N C E L E C L++ NL + DE Sbjct: 450 AKGGPIRATNPCGEEPLY------------EYESCNLASINLAKFVKYDDEGKPYFDWDE 497 Query: 478 LEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSAN 537 + + LD +D +P+P R +G+G++ A L K G Y+ Sbjct: 498 YAYVIQKVAKYLDNAIDVNRFPLPEIDYNTKLTRRIGVGMMGLADALFKLGIPYNSEEGF 557 Query: 538 NLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHY 597 K E + +Y K S E AK++G P + ++ Y G LP++ + E + Sbjct: 558 AFMRKATEYLTFYAYKYSVEAAKKRGTFPLYEKSRYKDGELPVEGFYH------REIWNL 611 Query: 598 DWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVP 657 W+ L E IK HG+RN ++ P+ + S I++ ++GIEP V K+ G V P Sbjct: 612 PWDELVEEIKKHGVRNGMVTTCPPTGSVSMIADTSSGIEPIFALVYKKSVTVGEFYYVDP 671 Query: 658 DY--------------------------------EHLHDAYELLWEMPGNDGYLQLVGIM 685 + E + + ++ D ++ + Sbjct: 672 VFEAELKKRGLWSDEILKKISDNYGSVQGLEEIPEDMQRVFVTSMDVHWLD-HILAQANI 730 Query: 686 QKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQ 742 Q ++ S S N ++ + L AYK G K T+Y RDG+ Q Sbjct: 731 QLWLTDSASKTINMP------NDATVEDVKAAYLLAYKLGCKGITVY----RDGSLSVQ 779 >UniRef50_B1V8V8 Ribonucleoside-diphosphate reductase n=61 Tax=Bacteria RepID=B1V8V8_PHYAS Length = 856 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 152/678 (22%), Positives = 278/678 (41%), Gaps = 47/678 (6%) Query: 101 ALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFS-YAAVKQLEGKYLVQN 159 L + + + Y+ L Y E++ K + I + + FS + + Y +++ Sbjct: 207 TLKEKLTFLQTNEYYETDFLSQYNEQQIKDIYK-IAYQKQFRFSTFMGAFKFYNDYALKS 265 Query: 160 RVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPT 219 R E+ + C+ + Y + + KR ++ + TP + Sbjct: 266 RDKKYYLETYEDR-----LCVNALYHAQGDFEIAKRLIKSLINQDFTPATPTLLNAGKKH 320 Query: 220 -RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 +F SC L+E GDSL+ I + ++ G+ IN +RA G I+G + G Sbjct: 321 RGEFVSCFLLEAGDSLNDIARINEFSMQLSKIGGGVSINITNLRAKGESIKGIKGVCKGV 380 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 + K + + Q G R GA ++ ++H ++E L K E RV+ + GV Sbjct: 381 VGVCKLLDHSFRYADQMGQRTGAGAVYLSVFHADIEDFLSTKKLNADEDVRVKTLSLGVI 440 Query: 339 INKLMYTRLLKGEDITLFSPSDVPGLYDAFFAD-QEEFERLYTKYEKDDSIRKQRVKAVE 397 + M K E + F P V Y+ FAD + Y + +RK+ ++ + Sbjct: 441 VPNKMIELARKNEVMYTFYPHTVFLEYEKNFADIAVNMDYWYDILVSNPKVRKKAIQPRQ 500 Query: 398 LFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALP--TKPLNDVN-- 453 L L+ + + +G Y+ D+ N ++ + V+ SNLC EI P T D N Sbjct: 501 LLELIARMQGESGYPYLMFCDNVNQNN---TSHLQVKFSNLCTEILQPTITSHYTDYNHT 557 Query: 454 --DENGEIALCTLSAFNLGAINNLDELEELAILAVRALDAL-LDYQDYPIPAAKRGAMGR 510 D+ G C L++ ++ + N + ++E +A+ ++ + + +PA + Sbjct: 558 QEDKIGMDVSCNLASGHMSNMINNNTIKETVFMAMEVMNTVSMKTNINYVPAVAKANRLN 617 Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFN 569 R++G G++ +LA++ + +L F AI YY L S + AK+ G F Sbjct: 618 RSVGFGIMGHHGFLAQNYIAFGSEENKDLIDVFFNAINYYSLLHSCQKAKKTGQKFYLFE 677 Query: 570 ETTYAKG--------ILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMP 621 ++ YA G ILP K + P DW+ L++ ++ GL NS A+ P Sbjct: 678 KSHYADGSYFKGRGEILPKTDKIKKMFANIPLPSEKDWQQLKKDVQQFGLFNSHRLAVAP 737 Query: 622 SETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQL 681 + T I T + P + V + + +P + Y ++M + + Sbjct: 738 NGTIGYIMGTTPSLTPIKQLVEERTYGNSKTYCPMPGLKETSFMYVTAYKM-NKYQLIDV 796 Query: 682 VGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDA 741 + QK +DQ IS + + ++L + L A+ G+KTLYY T+ Sbjct: 797 IATAQKHVDQGISFELGI------TSDITTRELQRYYLYAHHKGIKTLYYTRTQ------ 844 Query: 742 QDDLVPSIQDDGCESGAC 759 ++ D CE+ Sbjct: 845 ------KLKVDECEACGV 856 >UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPP8_9BACL Length = 574 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 141/462 (30%), Positives = 222/462 (48%), Gaps = 11/462 (2%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETI 62 + V KRDG E ++LDKI L E ++ Q DG++TS+I Sbjct: 37 KTFTVEKRDGRIEPLSLDKIFAFLRRGCEAAEGCDPERLAADVWPQLRDGMRTSEIARVA 96 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKA-----YGQFEPPALYDHVVKMVEMGKYDN 117 I+AA + S P +Q++AARL + K+A Y Y +V++ +G+Y Sbjct: 97 IQAAVEKTSVAEPGWQFVAARLLLLDAYKQASRNRGYRHLGYGDFYQLIVELERIGRYGT 156 Query: 118 HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 ++ E Y+E+E ++ +I +RD +Y +KQL +Y ++N G I E Q L++ V+ Sbjct: 157 YIREHYSEDEIAELAAYIKPERDHLLNYVGLKQLLDRYAIRNLDNG-IMELPQELFMGVS 215 Query: 178 ACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI 237 L + ++ + KRFYD +ST + ++ TP +S R P Q SSC + D L SI Sbjct: 216 MHLAMKE--KDKVAWAKRFYDMLSTLQATVATPTLSNARKPFHQLSSCFIDMPEDDLVSI 273 Query: 238 NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV 297 AT A + G+GI G+IRA GS IR G +P+ ++F SC+Q G+ Sbjct: 274 YATDEAFARVSKFGGGMGIYVGKIRARGSAIRNHPGASGGVVPWIRNFNNTAVSCNQLGM 333 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R GAA ++ +WH ++ L L+ N G E + + GV I L R+ + LF Sbjct: 334 RAGAAAVYLDVWHKDILDFLQLRTNNGDERMKAHDIFPGVCIPDLFMRRVEERGMWYLFC 393 Query: 358 PSDVPGLYDAFFAD--QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQ 415 P +V + D EEFER Y ++ ++ + + A+E+ +MQ TG +I Sbjct: 394 PYEVRKVMGFSLEDSWGEEFERRYEACVENPNLPRVEIPAIEIMKRIMQSAFETGTPFIF 453 Query: 416 NVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENG 457 D N +P + V SNLC EI P + + Sbjct: 454 FRDTANRLNP-NKHAGMVYCSNLCTEIIQNMSPSRRIEETEE 494 >UniRef50_C1D7Z3 Ribonucleoside-diphosphate reductase n=5 Tax=Betaproteobacteria RepID=C1D7Z3_LARHH Length = 947 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 135/643 (20%), Positives = 241/643 (37%), Gaps = 103/643 (16%) Query: 149 KQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLP 208 + L KY + + VAA L +R + + FY A+ Sbjct: 17 EVLLEKYAKGDEQN------VADVRRRVAAALAGQEQEPSR--HAESFYWAMEQG-FIPG 67 Query: 209 TPIMSGVRTPTR-QFSSCVLIECGDSLD-------SINATSSAIVKYVSQRAGIGINAGR 260 I S T +C + GDS+ I + + + G+G N R Sbjct: 68 GRINSAAGTELSATLINCFVQPVGDSVSETRDGKVGIYEALLQAAETMRRGGGVGYNFTR 127 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 IR G+ ++G + +G + + + F + ++ G R GA H ++ES + K Sbjct: 128 IRPKGARVKGTNSRASGPVSYMRVFDRSCETVESAGARRGAQMGVLDCDHPDIESFIHAK 187 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 + +R+ + V ++ + L + D++EF Sbjct: 188 -----DAGDLRNFNISVGVSDAFMQAVEADGSWELVHKEE---------PDRKEFPDACQ 233 Query: 381 KYEKDDSIRKQRVKAVELFSLMMQE---RASTGRIYIQNVDHCNTHSPFDPAIAPVRQSN 437 + D + V+A +L++ +M+ A G +++ ++ N S + + +N Sbjct: 234 R--ADGKWVYRAVRARDLWNQIMESTYDHAEPGVLFMSKINRDNNLSYCE----VIESTN 287 Query: 438 LCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVR 487 C E LP + C L + NL + +++ +VR Sbjct: 288 PCGEQPLP------------DYGCCDLGSINLTRFVRDPFTAKAGFDFATFDKVVRQSVR 335 Query: 488 ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 LD +LD +P+P +R A +R +G+G L +YS + + EA+ Sbjct: 336 MLDNVLDLTVWPLPEQQREAQSKRRIGLGFTGLGDALIMLTIKYSSDAGRAFAARVSEAM 395 Query: 548 QYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 + AS +LA E+GA P F+ D Y + + P + ++ IK Sbjct: 396 RNSAYDASVDLAIEKGAFPLFDA----------DQYLAEPHCASRLP-----KEIKARIK 440 Query: 608 THGLRNSTLSALMPSETSSQ--ISNATNGIEPPRGYVSIK--ASKDG------------- 650 HG+RNS L ++ P+ T S NA+NGIEPP + + DG Sbjct: 441 KHGIRNSHLLSIAPTGTISLAFADNASNGIEPPFSWFYTRKKRMADGTQQEYRVEDHAYR 500 Query: 651 ILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVP 710 + R++ D L D + EM D ++ +V + FID +IS N P Sbjct: 501 VYRELGGDVSSLPDYFVSALEMSALD-HMSMVAAVAPFIDTAISKTVNVP------ADYP 553 Query: 711 MQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQD 751 + A++ G+K T Y N+ G+ + + + D Sbjct: 554 FADFESLYIEAWRAGLKGITTYRPNSVLGSVLSVEPTRETPAD 596 >UniRef50_D0ME23 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0ME23_RHOM4 Length = 620 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 140/616 (22%), Positives = 233/616 (37%), Gaps = 76/616 (12%) Query: 154 KYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMS 213 +Y N V + E + VA L + P R ++ +RFY + FK I++ Sbjct: 27 RYREGNVVRDQTIE---DTWRRVARALAAAEPESERARWAERFYQVLYGFKFLPGGRILA 83 Query: 214 GVRTPTR-QFSSCVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGG 271 G T R +C ++ DSLD I + + Q G+G + +R G+ R Sbjct: 84 GAGTRHRVTLFNCFVMGIIEDSLDGIFDSLKEGALTMQQGGGVGYDFSTLRPAGTRARTT 143 Query: 272 EAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVR 331 +G + F + + G R GA H ++E+ + K+ GV + Sbjct: 144 GTIASGPVSFMHIWDAMCATLLSTGARRGAMMATLRCDHPDIETFVTAKHRPGV----LT 199 Query: 332 HMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQ 391 H + VQ+ + + D L P L D D R +T + R Sbjct: 200 HFNLSVQVFDEFMEAVRRDADWPLVFP--AAALEDEGMGDGPIVYRRWTGTDGPVPCRVL 257 Query: 392 RV-KAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN 450 RV KA L+ +++ + +D N + + +N C E LP Sbjct: 258 RVVKARALWEQILRATYDYAEPGVLFIDTINRMNNL-AYREHITATNPCGEQPLPP---- 312 Query: 451 DVNDENGEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDALLDYQDYPI 500 C L + NL + + + E +AVR LD ++D +P+ Sbjct: 313 --------YGACDLGSINLTRFVRAPFTPEADLDWEGIRETVAVAVRMLDNVIDVSGFPL 364 Query: 501 PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAK 560 PA A G R +G+G+ A L G Y+ A L + + I + + S LA+ Sbjct: 365 PAQAEQARGTRRIGLGITGLADALIMLGLHYASEEARQLAARVMQTICHTAYRTSIALAR 424 Query: 561 EQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALM 620 E+G P+F Y + + E +R+ I T+G+RNS L ++ Sbjct: 425 EKGVFPFFERERYLESPF----------------IQALPEDIRKGIATYGIRNSHLLSIA 468 Query: 621 PSETSSQIS-NATNGIEPPRGYVSIK--ASKDGILR-------------QVVPDYEHLHD 664 P+ T S ++ N ++GIEP Y + DG R ++ D E L + Sbjct: 469 PTGTISLLANNVSSGIEPVFAYRYTRYILGLDGERRAYTLTDYALRLWQRLHGDSEMLPE 528 Query: 665 AYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKF 724 A+ + D +L++ +Q ++D +IS N P + AY Sbjct: 529 AFVDAQHLDPYD-HLKMQAALQPYVDGAISKTVNVP------ADTPFNAFRQLYDWAYDH 581 Query: 725 GVK--TLYYQNTRDGA 738 G+K T Y + GA Sbjct: 582 GLKGCTTYRPSPVRGA 597 >UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YVI2_THEON Length = 910 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 158/834 (18%), Positives = 287/834 (34%), Gaps = 158/834 (18%) Query: 7 VTKRDGSTERINLDKIHRVLDWAA------------------------------EGLHNV 36 V KRDG + ++I + A + N+ Sbjct: 6 VMKRDGRIVPFDKERIKWAIQRAMLEVGVRDEKLLNRVVRRVVKRVNELYDGQVPHIENI 65 Query: 37 -SISQVELRSHIQFYDGIKT--------SDIHETIIKA-AADLISRDAPDYQYLAARLAI 86 I ++EL + +D K ++I E K D + + A R+ Sbjct: 66 QDIVELEL-MRVGLFDVAKAYILYRKKKAEIREEKKKILNKDKLDEIDKRFSINALRVLA 124 Query: 87 F-HLRKKAYGQF--EPPALYDHVVKMV--EMGKYDNHLLEDY--TEEEFKQMDTFID--H 137 +L + G+ P L++ V +V YD + + E++ ++ +++ Sbjct: 125 SRYLIRNEKGEIIESPRELFERVATLVVIPDLLYDERVFDREGNHEQDLSNVEKYMEKLD 184 Query: 138 DRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA----CLFSNYPRETRLQYV 193 + D S K KY + R+ E AQ + V+ + N + + Sbjct: 185 EYDRKLSIGRFKL--NKYHFE-RLLNLYRELAQKGQMKVSIDEVIGMLENGAFDKYEDEI 241 Query: 194 KRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAG 253 + ++ +++ TP + P S+C ++ D ++SI + + G Sbjct: 242 EEYFRLMTSQTFMPNTPALINSGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKMGGG 301 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 G+N ++R G + +G + F QGGVR GA +WH ++ Sbjct: 302 TGLNFSKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDI 361 Query: 314 ESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQE 373 E + K + N + + + V I + L +G+ L +P + Sbjct: 362 EKFIHAKEKN-IGTNVLANFNISVGIWSDFWEALREGKRYPLINPRTGEKV--------- 411 Query: 374 EFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIA-P 432 + + LF + + + D N + +PA Sbjct: 412 -----------------KEIDPKSLFEELAFMAWAKADPGVIFFDVINRRNVLEPAKGEK 454 Query: 433 VRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELA 482 +R +N C E L E C L++ NL + DE + Sbjct: 455 IRATNPCGEEPLY------------EYESCNLASINLAKFVKYDEEGKPYFDWDEYAYVI 502 Query: 483 ILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHK 542 + LD +D +P+P R +G+G++ A L K G Y+ + K Sbjct: 503 QKVAKYLDNAIDVNKFPLPEIDYNTKLTRRIGVGMMGLADALFKLGIAYNSKEGYDFMRK 562 Query: 543 TFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEAL 602 E + +Y K S E AK++G P + +T Y G LP++ Y E W+ L Sbjct: 563 ATEYLTFYAYKYSVEAAKKRGPFPLYEKTRYKDGELPVEGYYH------REVWTLPWDEL 616 Query: 603 RESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY--- 659 E IK +G+RN ++ P+ + S I++ ++GIEP V K+ G V P + Sbjct: 617 VEEIKKYGVRNGMVTTCPPTGSVSMIADTSSGIEPIFALVYKKSVTVGEFYYVDPVFEAE 676 Query: 660 -----------------------------EHLHDAYELLWEMPGNDGYLQLVGIMQKFID 690 E + + ++ D ++ +Q ++ Sbjct: 677 LKKRGLWSDELLRKISDNYGSVQGLEEIPEDMQRVFVTSMDIHWLD-HILAQANIQLWLT 735 Query: 691 QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQ 742 S S N ++ + L AYK G K T+Y RDG+ Q Sbjct: 736 DSASKTINMP------NDATVEDVKAAYLLAYKLGCKGITVY----RDGSLSVQ 779 >UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyrobaculum RepID=A3MX47_PYRCJ Length = 853 Score = 490 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 147/831 (17%), Positives = 295/831 (35%), Gaps = 138/831 (16%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKA 65 V K +GS E +K+ R ++ AA+ +V+ + I+ + + ++ + ++ Sbjct: 3 RVLKLNGSVEPFQPEKLRRSIERAAQDAGV----EVDGAADIKVERDVGSWELAD-LVHV 57 Query: 66 AADLISRDAPDYQYLAARLAIFHLRKKAYGQ--FEPPALYDHVVKMVEMGKYDNHLLEDY 123 + + P+ +A + + K+ +G+ + ++ + + + +++ Sbjct: 58 ELLKKAIERPELAEVAKSHLLGRIYKEIFGRDFLRVKSDEEYQRRALAAFEKLAGVIKPE 117 Query: 124 TEEEFKQMDTFIDHDRDMTFSYAAVKQLEGK-YLVQNRVTGEIYESAQFLYILVAACLFS 182 E +Q+ + + D + SY A++ Y ++ R+ ++ E+ A Sbjct: 118 ALELLRQLK--LRPEFDRSLSYNALRLFTNGNYALR-RLDFQLAETPSM------AAARV 168 Query: 183 NYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI----- 237 ++ + +YD +++ K+ +P T F+SC ++ D L SI Sbjct: 169 ATAVARDVERARLYYDYITSLKLIPASPYWFNAWTSKEMFASCFILMIEDCLSSITHPGK 228 Query: 238 ---NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQ 294 + G+G + +R G +RG +G I F K F V+ Q Sbjct: 229 RCIYDVLTRSGLIQQAGGGVGYDFSLLRPEGDVVRGSAGVASGPISFMKLFDANVEVIKQ 288 Query: 295 GGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR---LLKGE 351 GG R GA +WH ++ + K ++ +++ + V ++ + + K Sbjct: 289 GGKRRGAQMGTLHVWHPDIRKFIKAKTGE-LKDVHLQNFNISVVVDDAFMEKALDVDKDP 347 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR 411 + L +P V + E R + KD ++ V A ELF +++ +G Sbjct: 348 NYPLVNPRIVVEKLGIKPIEVLELTREV-QLPKDATV--GSVNAKELFREIVEGAWDSGD 404 Query: 412 IYIQNVDHCNTHS-----PFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSA 466 + + N + D +N C E+ K +C L+ Sbjct: 405 PGLIFKSNMNASNSLLYVNVDGDRYVWFGTNPCAEVPGADKD------------VCNLTH 452 Query: 467 FNLGAIN----------------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGR 510 NL + L E A + VR LD +D + Sbjct: 453 INLVKFVKEGCSGRTLEEKLECIDWAGLAETARVGVRFLDDAVDISTTGMKDVDETYRKI 512 Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNE 570 R +G+GV+ A L K Y+ A L ++ I L S ELA+E+G +F++ Sbjct: 513 RKIGLGVMGLAEMLIKLEIPYASWDAVTLVNRVLAWIYLNALDESAELARERGPFKYFHQ 572 Query: 571 TTYAKGILPIDTY---------------------------------KKDLDTIANEPLHY 597 + YA+G++P+ Y ++ LD +A Sbjct: 573 SDYARGVIPVLKYQDFVWSRWERVRAAYPPEYRELGDRLKAITYETRRWLDAMAKRFGKP 632 Query: 598 DWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV- 656 L E + G+RNS + ++ P+ +S ++ T+G+EP ++ G L + Sbjct: 633 TLAELSEKV-KGGVRNSVVMSVAPTGRTSILAGTTSGVEPVFALAFLRNVTVGTLVEYYW 691 Query: 657 -----------------------------PDYEHLHDAYELLWEMPGNDGYLQLVGIMQK 687 P E + E+ ++ + Q+ Sbjct: 692 PGVEYLRARGLWTPEVRRAVEESGMLRDAPVPEDVKHLLATAMEIHWA-WHVLMQASAQQ 750 Query: 688 FIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 ++DQ IS N + A+ GVK T+Y ++ Sbjct: 751 WVDQGISKTINMP------ANATKDDVYWAFALAWALGVKGITVYRDKSKS 795 >UniRef50_B2A494 Ribonucleoside-diphosphate reductase n=16 Tax=cellular organisms RepID=B2A494_NATTJ Length = 752 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 119/641 (18%), Positives = 228/641 (35%), Gaps = 127/641 (19%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP------RETRLQYVK 194 M + A LE +YL + GE E+ + + VA + ++ + + Sbjct: 1 MELTKNAKMVLEKRYL-KTNEKGET-ENPEDMLKRVADNIAQVEKDVYQKDKQEVSKVSQ 58 Query: 195 RFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGI 254 F+D + +P + +Q ++C ++ DS++SI G Sbjct: 59 NFFDLMDNQYFMPNSPTLMNAGRELQQLAACFVLPIEDSMESIFEAIKNAALIHKSGGGT 118 Query: 255 GINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVE 314 G + +R + +G + F K F +A ++ QGG R GA + H +++ Sbjct: 119 GFSFSNLRPKNDIVLSTGGVASGPVSFMKVFNSATEAVKQGGTRRGANMGILRVDHPDIQ 178 Query: 315 SLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEE 374 + K + + + + + V I + + + + +L +P + + Sbjct: 179 EFITCKR----DSDEINNFNISVGITEEFMEAVKQDGEYSLKNPKNGQAV---------- 224 Query: 375 FERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVR 434 + ++A E+F +++ G I +D N ++P P I + Sbjct: 225 ----------------KTLRAREVFDKIVEMAWGNGEPGIVFIDKMNENNP-TPHIGEIE 267 Query: 435 QSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRAL 489 +N C E P P C L + NL + + L+E AV L Sbjct: 268 STNPCGE--QPLLPFE----------SCNLGSVNLSKMVNNGAVDYQLLKETVHTAVHFL 315 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 D ++D YP+P ++ + R +G+GV+ F L K Y+ A +L K I Sbjct: 316 DNVIDANRYPLPEIEKTSKENRKIGLGVMGFGDMLFKLRIPYNSQEALDLAEKVMGYIDQ 375 Query: 550 YLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH 609 S ELAKE+GA P F + Y D EP Sbjct: 376 ESKAKSQELAKERGAFPNFKGSIY--------------DQKGEEP--------------- 406 Query: 610 GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD-------------------- 649 +RN+T + + P+ T S + ++GIEP + D Sbjct: 407 -IRNATTTTIAPTGTISILCGTSSGIEPLFALAFTRNVLDNDKLVEVNPVFKEATEEAGC 465 Query: 650 ------------GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANT 697 G ++ + + + + ++ + +L++ QK D ++S Sbjct: 466 YSSELMEKVADKGSIQDIDEIPDSIKKVFVTSHDI-SPEWHLKMQAAFQKATDNAVSKTV 524 Query: 698 NYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 N + ++ + + A++ K T+Y +RD Sbjct: 525 NLP------NEADLKDVYEIYNLAHELNCKGVTVYRDGSRD 559 >UniRef50_C3XAC6 Ribonucleoside-diphosphate reductase n=3 Tax=Betaproteobacteria RepID=C3XAC6_OXAFO Length = 963 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 134/626 (21%), Positives = 236/626 (37%), Gaps = 100/626 (15%) Query: 149 KQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLP 208 + L KY N S + + VA L + + +Y + F A+ Sbjct: 27 EVLLEKYAKGNET------SVEEVMERVAQALAEVEAPKNKKKYAEEFLWALQNG-FIPA 79 Query: 209 TPIMSGVRTP-TRQFSSCVLIECGDSLD-------SINATSSAIVKYVSQRAGIGINAGR 260 + S T +C + GDS+ I + + + + G+G N Sbjct: 80 GRVSSAAGTGLQTTLINCFVQPVGDSITNMVDGKPGIYTALAQAAETMRRGGGVGYNFSS 139 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 IR G+ +RG + +G I + K F + ++ G R GA + H ++ + +K Sbjct: 140 IRPRGAKVRGTGSSASGPISYMKVFDRSCETVESAGARRGAQMAVLNIDHPDIVEFITIK 199 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 E N++ + + V + + D L ++ E + + Sbjct: 200 Q----EQNQLSNFNVSVGVTDKFMQAVESDGDFELAHVAEPNN----------ELKEKGS 245 Query: 381 KYEKDDSIRKQRVKAVELFSLMMQE---RASTGRIYIQNVDHCNTHSPFDPAIAPVRQSN 437 D +VKA +++ L+M+ A G +YI ++ N + + + +N Sbjct: 246 YKRADGKWVYSKVKARDIWDLVMKSTYNAAEPGVLYIDRINRENNLAYCE----VIEATN 301 Query: 438 LCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVR 487 C E LP + C L + NL + + + + +AVR Sbjct: 302 PCGEQPLP------------DYGCCCLGSLNLTSFVTAPFSAHPLFDFNLFARVTKIAVR 349 Query: 488 ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 LD +L +P+ + A +R +G+G L G RY A L+ + +A+ Sbjct: 350 MLDNVLTATKWPLEEQAKEAAAKRRIGLGFTGLGDALIMLGIRYDSEEARILSSEISKAM 409 Query: 548 QYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 + S +LAKE+GA P + Y KG ++ P E ++ I+ Sbjct: 410 RDAAYSGSIDLAKERGAFPMLDVENYLKGGF-----------VSRLP-----EEMKAQIR 453 Query: 608 THGLRNSTLSALMPSETSSQ--ISNATNGIEPPRGYVS--IKASKDG------------- 650 HG+RNS L+++ P+ T S NA+NGIEP + +K DG Sbjct: 454 KHGIRNSHLTSIAPTGTISLAFADNASNGIEPAFSWFYNRVKRMPDGSKKNYTVEDHAYR 513 Query: 651 ILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVP 710 I R + D L D + E+ D ++ +V + +ID +IS N + P Sbjct: 514 IYRSMGNDVSKLPDYFVSALEISAID-HMLMVAAVAPYIDAAISKTVNVA------EEYP 566 Query: 711 MQQLLKDLLTAYKFGVK--TLYYQNT 734 + + A+K G+K T Y N Sbjct: 567 YEDFKNLYMEAWKKGLKGITTYRPNN 592 >UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=Mycobacterium RepID=A1KG47_MYCBP Length = 710 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 144/748 (19%), Positives = 247/748 (33%), Gaps = 159/748 (21%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQ---VELRSHIQFYDGIKTSD-IHETI 62 V +RDG+ ++ +I + AA + V GI + I + Sbjct: 9 VRRRDGTLVPFDIARIEAAVTRAAREVACDDPDMPGTVAKAVADALGRGIAPVEDIQDC- 67 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLED 122 + ARL A D V ++ +++ Sbjct: 68 -----------------VEARL--------------GEAGLDDVARV--------YIIYR 88 Query: 123 YTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS 182 E + + ++ S AAV L +YL+ + G ES L A C+ + Sbjct: 89 QRRAELRTAKALLGVRDELKLSLAAVTVLRERYLLHDE-QGRPAESTGELMDRSARCVAA 147 Query: 183 N---YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINA 239 Y + ++ +RF + + +P + T + C ++ DSL SI A Sbjct: 148 AEDQYEPGSSRRWAERFATLLRNLEFLPNSPTLMNSGTDLGLLAGCFVLPIEDSLQSIFA 207 Query: 240 TSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRG 299 T + G G +R G + +G + F + + +A S GG R Sbjct: 208 TLGQAAELQRAGGGTGYAFSHLRPAGDRVASTGGTASGPVSFLRLYDSAAGVVSMGGRRR 267 Query: 300 GAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPS 359 GA + H ++ + K E + H + V + + + L +P Sbjct: 268 GACMAVLDVSHPDICDFVTAKAESPSE---LPHFNLSVGVTDAFLRAVERNGLHRLVNPR 324 Query: 360 DVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDH 419 R+ A ELF + + + G + +D Sbjct: 325 T--------------------------GKIVARMPAAELFDAICKAAHAGGDPGLVFLDT 358 Query: 420 CNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NN 474 N +P P + +N C E+ P P C L + NL + + Sbjct: 359 INRANPV-PGRGRIEATNPCGEV--PLLPYE----------SCNLGSINLARMLADGRVD 405 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 D LEE+A +AVR LD ++D YP P A R +G+GV+ A LA G Y Sbjct: 406 WDRLEEVAGVAVRFLDDVIDVSRYPFPELGEAARATRKIGLGVMGLAELLAALGIPYDSE 465 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP 594 A L + IQ AS LA+E+GA P F ++ +A+ Sbjct: 466 EAVRLATRLMRRIQQAAHTASRRLAEERGAFPAFTDSRFARSG----------------- 508 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQ 654 RN+ ++++ P+ T S I+ T GIEP +A L + Sbjct: 509 ---------------PRRNAQVTSVAPTGTISLIAGTTAGIEPMFAIAFTRAIVGRHLLE 553 Query: 655 VVPDYEHL-------------------------------HDAYELLWEMPGNDGYLQLVG 683 V P ++ L A+ E+ +L++ Sbjct: 554 VNPCFDRLARDRGFYRDELIAEIAQRGGVRGYPRLPAEVRAAFPTAAEIAPQ-WHLRMQA 612 Query: 684 IMQKFIDQSISANTNYDPSRFPSGKVPM 711 +Q+ ++ ++S N + P Sbjct: 613 AVQRHVEAAVSKTVNLPATGRSMTSAPS 640 >UniRef50_Q160T8 Ribonucleoside-diphosphate reductase n=25 Tax=Alphaproteobacteria RepID=Q160T8_ROSDO Length = 832 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 135/639 (21%), Positives = 237/639 (37%), Gaps = 105/639 (16%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKIS 206 A + + KY + + + + + +A L +T + ++FY A+ FK Sbjct: 9 AEQIWDMKYRFKAADGAPLDVTVEDTWRRIARDLARVE--KTPEVWEEKFYAALEDFKYL 66 Query: 207 LPTPIMSGVRTPTR-QFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRAL 264 I +G T +C ++ DS+ I + Q GIG + IR Sbjct: 67 PAGRITAGAGTARSVTLFNCFVMGTVPDSMGGIFDMLKEAALTMQQGGGIGYDFSTIRPK 126 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 G+ ++G A +G + F + ++ G R GA H +VE + K++ Sbjct: 127 GADVKGVAADASGPLSFMDVWDAMCRTIMSAGSRRGAMMATMRCDHPDVEDFIAAKSDPA 186 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK 384 R+R + V I + L Sbjct: 187 ----RLRMFNMSVLITDPFMEAVKADGPWDLVF--------------------------- 215 Query: 385 DDSIRKQRVKAVELFSLMMQ---ERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLE 441 D + V+A +L++ +MQ + A G I+I ++ N S + + +N C E Sbjct: 216 -DGKVYRTVQARDLWNRIMQATYDYAEPGVIFIDRINQANNLSYCET----IAATNPCGE 270 Query: 442 IALPTKPLNDVNDENGEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDA 491 LP C L + NL + + L++L AVR +D Sbjct: 271 QPLPP------------YGACLLGSINLARLVSNPFEDTAALDEAALDDLVATAVRMMDN 318 Query: 492 LLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYL 551 ++D +P+ A R A +R +G+GV A L G RY A T + +I Sbjct: 319 VVDASKFPLEAQAREAQAKRRIGLGVTGLADALLMMGLRYGSDEAARQTDRWLHSIARAA 378 Query: 552 LKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGL 611 AS +LA+E+GA P F+ Y +A+ + E +R++++ HG+ Sbjct: 379 YLASVDLAREKGAFPLFDADKY----------------LASGTMQAMDEDVRDAVREHGI 422 Query: 612 RNSTLSALMPSETSSQISN-ATNGIEPPRGYVSIKAS---KDGILRQVVPDY-------- 659 RN+ L+++ P+ T S + ++GIEP Y + + V DY Sbjct: 423 RNALLTSIAPTGTISLYAGNVSSGIEPVFAYAYTRKVLQKDGSRTEEEVVDYAVQLWREK 482 Query: 660 ---EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLK 716 + L D + + + ++++ QK++D SIS N + Sbjct: 483 FGDKELPDYFVNAQTLAPLE-HVKMQAAAQKWVDSSISKTINCP------EDIGFDAFKD 535 Query: 717 DLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDG 753 + A+ G K T Y N G+ + + PS QD Sbjct: 536 VYMEAWDSGCKGCTTYRPNAVTGSVLSVSEEKPSKQDAD 574 >UniRef50_D2BQ84 Ribonucleoside-diphosphate reductase n=32 Tax=Lactobacillales RepID=D2BQ84_LACLK Length = 722 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 163/693 (23%), Positives = 280/693 (40%), Gaps = 48/693 (6%) Query: 95 GQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGK 154 ++E D + +V+ + LE Y E + + S+ A + + Sbjct: 46 NRYEADTYIDKLNWLVKEEYLEAEFLEKYKPEFITNLRKELSKFEFHFDSFMAAYKFYNQ 105 Query: 155 YLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSG 214 Y ++N E + ++ A + + A+ + TP Sbjct: 106 YAMKNNDGSLYLEDFEDRVLMNALYMADG-----DEKLANNLAFAMINRRYQPATPTFLN 160 Query: 215 VRTPT-RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEA 273 +F SC L++ D ++SI T ++ ++ G+G+N +RA G+PI+G + Sbjct: 161 AGRKRRGEFVSCFLLQLTDDMNSIGRTINSALQLSKNGGGVGLNLTNLRAAGAPIKGYDG 220 Query: 274 FHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHM 333 G +P K F+ A +Q G R GA ++ ++H ++ L K E RV+ + Sbjct: 221 VAAGVVPVMKLFEDAFSYANQLGQRQGAGVVYLSLFHPDIMEFLSTKKENADEKIRVKTL 280 Query: 334 DYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRV 393 GV + Y + KGE + LF P V Y FA+ + Y K + IRK + Sbjct: 281 SLGVTVPDKFYELVKKGETMYLFEPYFVEKYYGKPFAEVD-ITAEYDKMVANPEIRKTPI 339 Query: 394 KAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN 453 + EL + + + +G YI NVD N +P D + SNLC EI P + Sbjct: 340 NSRELEQELSKLQQESGYPYIVNVDTVNQANPVD---GVISMSNLCSEILQVQTPSVLND 396 Query: 454 DEN----GEIALCTLSAFN-LGAINNLDELEELAILAVRALDALLDYQDY-PIPAAKRGA 507 D+ G C L + N L + + +E VRAL + + + +P ++G Sbjct: 397 DQTYKVVGTDVACNLGSTNVLNMMTSSNEFGTSIEAMVRALTFISETSNLDTVPTVRKGN 456 Query: 508 MGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACP 566 +G+G + +LA++ Y A T F + YY L ASN+LA E+G + Sbjct: 457 DEMHAIGLGAMGLHSFLAQNQIHYDSKEAVEFTSVYFMLLNYYTLVASNKLAVEKGSSFK 516 Query: 567 WFNETTYAKGILPIDTY------------KKDLDTIANEPLHYDWEALRESIKTHGLRNS 614 F ++ YA G D Y ++L P DW ALR+++KT GL NS Sbjct: 517 NFEKSAYADGS-YFDKYLTHDYFAAVSSKVQELFKGIAVPTIEDWTALRDTVKTSGLYNS 575 Query: 615 TLSALMPSETSSQISNATNGIEPPRGYVSIKASK--DGILRQVVPDYEHLHDAYELLWEM 672 A+ P+ + S I++ ++ I P + + K I Y+ ++ Sbjct: 576 YRMAVAPNGSISYINDCSSSIHPIVNRIEERQEKKVGKIYYPAAGLATETIPYYKSAYDT 635 Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPS--------RFPSGKVPMQQLLKDLLTAYKF 724 + + + +DQ +S + + + K+ + L AYK Sbjct: 636 DMR-AVIDVYAAATEHVDQGLSLTLFMRSTLPEGLYEWKVANNKMTTRDLSILRNYAYKK 694 Query: 725 GVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESG 757 G+KT+YY T D Q++ + + CES Sbjct: 695 GIKTIYYIRT---FTDDQEE----VGANQCESC 720 >UniRef50_C6P0N4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0N4_9PROT Length = 981 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 129/644 (20%), Positives = 238/644 (36%), Gaps = 102/644 (15%) Query: 149 KQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLP 208 + L KY + +S Q + VA L E R ++ + F+ A Sbjct: 49 EVLLEKYAEADE------KSVQDVRRRVARGLAQAETPEQRAKWEEAFFLAQENG-FVPA 101 Query: 209 TPIMSGVRTP-TRQFSSCVLIECGDSLDS-------INATSSAIVKYVSQRAGIGINAGR 260 I S +C + GD++ I + + + G+G + Sbjct: 102 GRINSAAGLKIQATLINCFVQPVGDAISGTNDGKPGIYDALQQAAETMRRGGGVGYDFSS 161 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 IR G+ ++G + +G I + + F + ++ G R GA H ++E + K Sbjct: 162 IRPEGAHVKGTNSRASGPISYMRVFDRSCETVESAGARRGAQMGVLRCDHPDIEKFISAK 221 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 + +R+ + V + + + K E+ L ++ A + E Sbjct: 222 -----DQGDLRNFNISVGVTDALMQAVEKDEEFELVHSAEPSTAIKEAGATRRE------ 270 Query: 381 KYEKDDSIRKQRVKAVELFSLMM---QERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSN 437 D ++V+A +L+ ++ + A G ++I ++ N S + + +N Sbjct: 271 ----DGKWIYRKVRATDLWKQIIASTYDHAEPGVLFIDLMNRDNNLSYCE----IIEATN 322 Query: 438 LCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVR 487 C E LP C L + +L + + + ++L +AVR Sbjct: 323 PCAEQPLPP------------YGCCCLGSIDLTRMVKNPFSKHAGFDYEPFKQLVRVAVR 370 Query: 488 ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 LD +LD +P+P ++ A +R +G+G L G RY +A + Sbjct: 371 MLDNVLDVTAWPLPEQQQEAKNKRRIGLGFTGLGDALVMMGLRYDTDAARAFASDITRIM 430 Query: 548 QYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 + AS +LA E+G P + Y L + L + +++ I+ Sbjct: 431 RDEAYLASVDLAVERGKFPLLDADKY----LSAPRFASRLP-----------DEIKDKIR 475 Query: 608 THGLRNSTLSALMPSETSSQ--ISNATNGIEPPRGYVSIK--ASKDG------------- 650 HG+RNS L ++ P+ T S NA+NGIEP + + DG Sbjct: 476 KHGIRNSHLLSIAPTGTISLAFADNASNGIEPAFSWFYTRKKRMMDGTTKDYPVEDHAWR 535 Query: 651 ILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVP 710 + +Q D HL ++ E+ D ++++V + +ID SIS N P Sbjct: 536 VFKQQGGDVSHLPPSFVTALEISAID-HMKMVAAVAPYIDTSISKTVNVP------ADYP 588 Query: 711 MQQLLKDLLTAYKFGVKTL--YYQNTRDGAEDAQDDLVPSIQDD 752 + A+K G+K L Y N+ G+ + +D Sbjct: 589 YEDFKDLYTEAWKAGLKGLATYRPNSVLGSVLSVT--TEKKEDQ 630 >UniRef50_A7I485 Ribonucleoside-diphosphate reductase n=6 Tax=Methanomicrobia RepID=A7I485_METB6 Length = 741 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 113/638 (17%), Positives = 214/638 (33%), Gaps = 146/638 (22%) Query: 151 LEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTP 210 L +YL + + VA+ L + R FY+A+ + + +P Sbjct: 11 LSARYLRKGEKD------FTDICRRVASALADDENERAR------FYEAMISLRFLPNSP 58 Query: 211 IMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRG 270 + T Q S+C + D++D I G G N IR GSP++ Sbjct: 59 TLMNAGTEIGQLSACFTLPVPDTIDGIFDAMKEGAIIHKTGGGTGYNFSHIRPEGSPVQS 118 Query: 271 GEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRV 330 + +G I F + F A QGG R GA +WH ++ + + K G Sbjct: 119 TDGVASGPISFMRVFNAATDVIKQGGRRRGANMGILNVWHPDILAFISAKKKEGE----F 174 Query: 331 RHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK 390 + + V +N + + FE ++ Sbjct: 175 SNFNISVMVNDKFMDLV-----------------------AAKSFETVWLTKGGTG---- 207 Query: 391 QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN 450 +++ ++++ +++ G I D N H+P P + + +N C E P P Sbjct: 208 EKITVGQIWNGIVEGIWKNGEPGILFYDEINRHNP-TPQLGEIDTTNPCGE--QPLLPYE 264 Query: 451 DVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALDALLDYQDYPIPAAKR 505 C L + NL A + D L + + +A R LD +++ +PIP Sbjct: 265 ----------SCVLGSINLAACVREGAFDEDLLRDTSRMATRFLDLVIEKNVFPIPQIAE 314 Query: 506 GAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGAC 565 R +G+GV+ + G Y + I ++ S+ LA++ G Sbjct: 315 ATRKTRKIGLGVMGVHDAMLMLGLSYDSEKGRAWCEWVMKVITETAIEESHRLAEKLGTF 374 Query: 566 PWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETS 625 P + + + K + +RN+ ++ + P+ T Sbjct: 375 PAWQGSIW---------------------------------KDYEVRNAAMTTVAPTGTI 401 Query: 626 SQISNATNGIEPPRGYVSIKASKDG-ILRQVVPDYE------------------------ 660 S ++ ++GIEP + + + G + V P ++ Sbjct: 402 SLLAGCSSGIEPIFSFAYTRKNTVGKVFVIVNPVFKEALLHTLTGMGYAGDEREKKAGEV 461 Query: 661 ------------------HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPS 702 ++ ++P + ++ + QK++ SIS N Sbjct: 462 ISHVHETGSMQDVAWLSAEFRGLFKTALDIPWRE-HILMQACFQKYVHASISKTINMP-- 518 Query: 703 RFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGA 738 G + LL A+K G+K T+Y +R+ Sbjct: 519 ----GSATKDDCAEALLMAWKLGLKGITIYRTGSREDV 552 >UniRef50_A8LK99 Ribonucleoside-diphosphate reductase n=25 Tax=Bacteria RepID=A8LK99_DINSH Length = 765 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 138/643 (21%), Positives = 228/643 (35%), Gaps = 115/643 (17%) Query: 154 KYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMS 213 KY + I + + + +A L S + +FY A+ FK I + Sbjct: 16 KYRFKEADGTPIDVTVEDSWRRIARALASVE--SDPAAWEPKFYAALEDFKFLPAGRITA 73 Query: 214 GVRTPTR-QFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGG 271 G T +C ++ D + I + Q GIG + IR G+ ++G Sbjct: 74 GAGTERSVTLFNCFVMGTVPDDMGGIFEGLKEAALTMQQGGGIGYDFSTIRPKGAAVKGV 133 Query: 272 EAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVR 331 A +G + F + ++ G R GA H ++E+ + K++ R+R Sbjct: 134 AADASGPLSFMDVWDAMCRTIMSAGSRRGAMMATMRCDHPDIEAFIAAKSDPA----RLR 189 Query: 332 HMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQ 391 + V + + L D Sbjct: 190 MFNVSVLVTDAFMEAVKADGSWDLVF----------------------------DGKVYH 221 Query: 392 RVKAVELFSLMMQ---ERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKP 448 V+A +L++ +M+ E A G I+I ++ N S + + +N C E LP Sbjct: 222 TVEARDLWNKIMKATFEYAEPGVIFIDRINAANNLSYCET----IAATNPCGEQPLPP-- 275 Query: 449 LNDVNDENGEIALCTLSAFNL----------GAINNLDELEELAILAVRALDALLDYQDY 498 C L + NL GA + LEEL AVR +D ++D + Sbjct: 276 ----------YGACLLGSINLSRLISDPFGEGAALDEAALEELVATAVRMMDNVVDASRF 325 Query: 499 PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNEL 558 P+ A A +R +G+GV A L G RY +A T + I AS +L Sbjct: 326 PLEAQAAEARAKRRIGLGVTGLADALLMVGLRYGSEAAARQTERWLHRIARAAYLASVQL 385 Query: 559 AKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSA 618 A E+GA P F Y + + + +R +I HG+RN+ L++ Sbjct: 386 ATEKGAFPLFEADAYLQ----------------SGTMQTMDADVRAAIAEHGIRNALLTS 429 Query: 619 LMPSETSSQISN-ATNGIEPPRGYVSIKAS--KDGILRQVVPDYEHLHDAYELLWEMPGN 675 + P+ T S + ++GIEP Y + KDG + E + D LW Sbjct: 430 IAPTGTISLYAGNVSSGIEPVFAYSYTRKVLQKDGSRTE-----EEVVDYAVQLWREKFG 484 Query: 676 DG----------------YLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLL 719 D ++++ QK++D SIS N + + + Sbjct: 485 DADLPDHFVNAQTLAPLDHVRMQAAAQKWVDSSISKTINCP------EDISFAEFKDVYM 538 Query: 720 TAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDGCESGACK 760 A+ G K T Y N G+ + D + +D E G K Sbjct: 539 AAWDQGCKGCTTYRPNAVTGSVLSVSD--SATKDSEAEKGEVK 579 >UniRef50_Q8SCB8 Large subunit ribonucleotide reductase n=6 Tax=unclassified SPO1-like viruses RepID=Q8SCB8_9CAUD Length = 705 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 150/682 (21%), Positives = 288/682 (42%), Gaps = 53/682 (7%) Query: 104 DHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQ--NRV 161 + V + + G YD + + + ++M S+ A ++ Y V ++ Sbjct: 51 ERVRTLTKEGTYDK-VFDSIPDTIIEEMTKLAYSFNFQFQSFMACQKFYESYAVTQYDKD 109 Query: 162 TGEIY-ESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRT-PT 219 I+ E + + A LF + + R ++ + + TP+ Sbjct: 110 DNPIFVEDYEQHNVREALYLFQDDYVKAREMLIQ-----LMEQTLQPATPVYLNSGLGKR 164 Query: 220 RQFSSCVLIECGDS-LDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 + SSC L D ++SIN + ++ + G ++ R+R G+ + G G Sbjct: 165 GELSSCYLFIVDDDTIESINFITDSVRQASKNAGGCAVDLTRLRPRGTEVNGVPNASKGV 224 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 IPF K+ + +V +QGG R G+A + ++H ++ K + R+ + GV Sbjct: 225 IPFAKNIEQSVSYFNQGGKREGSAVCYLNIFHPDIHEFSSSKKINASDKVRLDTLSIGVT 284 Query: 339 INKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVEL 398 I L + + F+ DV Y F ++ Y + DD IRK++ ++ Sbjct: 285 IPNKFMELLKEDKYYYTFNVYDVKQKYG-FTLNEINMSEYYDIFVNDDDIRKEKYYTRDI 343 Query: 399 FSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTK------PLNDV 452 + + + + +G Y+ +D+ N + P + V+ SNLC E+ + L Sbjct: 344 MTDIARTQLESGYPYVFYIDNANDNHPLKK-LGKVQMSNLCCEVTQLQEVSDIFPYLQSH 402 Query: 453 NDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYP-IPAAKRGAMGRR 511 ND G +CTL + NL + L+E +R+L + D + P +P+ ++ R Sbjct: 403 NDTIGNDVVCTLGSLNLVNVVEKGLLKESVDSGIRSLSKVTDLMNVPFLPSVQKANDELR 462 Query: 512 TLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNE 570 +G+G +N+ LAK+ Y + ++ + F AI+YY +K+S ELAKE G F E Sbjct: 463 AIGLGAMNWHGLLAKNMLSYGSRESLDIANSLFSAIRYYSIKSSMELAKETGKVFKGFKE 522 Query: 571 TTYAKGIL----------PIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALM 620 + Y G + P K + P DW +L + +K +G+ N L+ L Sbjct: 523 SEYYTGEVFSSYIQKSHEPRTKKAKKVLEKVYIPTEEDWNSLSKDVKEYGMYNGYLNNLA 582 Query: 621 PSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAY---ELLWEMPGNDG 677 P+++ S + NAT+ I P + + + +P + + E +++ N Sbjct: 583 PTQSISYVQNATSSIMPVPSPIENRRYGNMDTYIPMPFMSPITQFFYESETAYKL-DNKR 641 Query: 678 YLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDG 737 + ++QK +DQ+IS + ++P +L+ A++ G+K+LYY ++ Sbjct: 642 IINTSAVIQKHVDQAISTILYVE------SEIPTNKLVSLYYYAWEKGLKSLYYTRSQ-- 693 Query: 738 AEDAQDDLVPSIQDDGCESGAC 759 +++ CES + Sbjct: 694 ----------TLKVIECESCSV 705 >UniRef50_B1XZE5 Ribonucleoside-diphosphate reductase n=11 Tax=Betaproteobacteria RepID=B1XZE5_LEPCP Length = 1007 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 139/645 (21%), Positives = 246/645 (38%), Gaps = 80/645 (12%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKIS 206 + + L KY + S + + VAA L S E R + +RF A Sbjct: 37 SAEVLIEKYAKGDES------SIEQVRRRVAAALASVEAPEARELWTERFLAAQERG-FV 89 Query: 207 LPTPIMSGVRTPTR-QFSSCVLIECGDSLD-------SINATSSAIVKYVSQRAGIGINA 258 I S T +C + GDS+ I + + + + G+G + Sbjct: 90 PAGRIASAAGTTLSATLINCFVQPVGDSIAEPEEGFPGIYTALTEAAETMRRGGGVGYDF 149 Query: 259 GRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLV 318 RIR G+ + ++ +G + + + F + ++ G R GA H +VE+ + Sbjct: 150 SRIRPYGAWVGSTQSHASGPVSYMRVFDRSCETVESAGSRRGAQMGVLRCDHPDVEAFIH 209 Query: 319 LKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERL 378 K + +++ + V + + + D+ L ++ E+ + Sbjct: 210 AK-----DKGDLKNFNISVGVTDVFMKAVEADTDVDLVHKAEP----------GEKQKAA 254 Query: 379 YTKYEKDDSIRKQRVKAVELFSLMMQE---RASTGRIYIQNVDHCNTHSPFDPAIAPVRQ 435 + D + V+A +L+ +M+ A G +++ ++ N S + + Sbjct: 255 GARQRADGLWVYRSVRARDLWDQIMRSTYDHAEPGVLFLDRINQDNNLSYCET----IAA 310 Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDY 495 +N C E LP P + ++ F A + E+ A R LD +LD Sbjct: 311 TNPCAEQPLP--PYGCCCLGSVDLTHFVQRPFESDASFDDAAFAEVCATATRMLDNVLDA 368 Query: 496 QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKAS 555 +P+PA ++ A +R +G+G L G RY +A + E ++ AS Sbjct: 369 TVWPLPAQQQEAANKRRVGLGFTGLGDALIMLGLRYDTPAARAMATHISEVMRDAAYIAS 428 Query: 556 NELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNST 615 ++LA+E+GA P FN Y G N A++E I+ +GLRNS Sbjct: 429 SDLAQERGAFPLFNADLYLSG---------------NSFASRLPAAVKEHIRVNGLRNSH 473 Query: 616 LSALMPSETSSQ--ISNATNGIEPPRGYVSIKASK--DGILRQV------VPDYEHLH-- 663 L ++ P+ T S NA+NGIEPP + + + DG ++ Y HL Sbjct: 474 LLSIAPTGTISLAFADNASNGIEPPFSWTYTRKKREADGTFKEFAVEDHAWRLYRHLKGA 533 Query: 664 -----DAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDL 718 DA+ EM + + +V + ID SIS N P + Sbjct: 534 DAPLTDAFVTALEMSA-EAHESMVAAVAPCIDTSISKTVNVP------ADYPYEDFQGLY 586 Query: 719 LTAYKFGVKTL--YYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 + A+K G+K L Y N+ G+ + VP + + + Sbjct: 587 MAAWKSGLKGLATYRPNSVLGSVLSVTPTVPVVAETAATPQPLTV 631 >UniRef50_Q2LW62 Ribonucleoside-diphosphate reductase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LW62_SYNAS Length = 551 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 120/614 (19%), Positives = 223/614 (36%), Gaps = 101/614 (16%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS---NYPRETRLQYVKRFYD 198 A+ L +YL+++ G + E+ + L+ VA + N P + + FY+ Sbjct: 6 QLDDNALLVLRERYLIRDEA-GTLLETPEELFRRVACSVSQGENNDPEGRSAEMEEAFYE 64 Query: 199 AVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINA 258 +++ + +P + P Q ++C ++ DSLDSI + K G G + Sbjct: 65 MMTSLEFLPNSPTLMNAGRPLGQLAACFVLPVEDSLDSIFDSVKLTAKIHQTGGGTGFSF 124 Query: 259 GRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLV 318 R+R ++ +G + F + F A ++ QGG R GA + H ++ + Sbjct: 125 SRLRPKNDVVKSTMGVASGPVSFIRVFNCATEAIKQGGTRRGANMGILRIDHPDIMEFVA 184 Query: 319 LKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERL 378 +K + + + + V I + D+ L +P Sbjct: 185 IKRDPAE----LTNFNLSVAITDEFMRSYEENRDVALINPRT------------------ 222 Query: 379 YTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNL 438 +V A EL + + ++G + +D N +P P + + +N Sbjct: 223 --------KKAAGKVNARELLRFIAEAAWASGEPGVIFLDAINRANP-TPHVGEIEATNP 273 Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELAILAVRALDALL 493 C E P P C L + NL I + L++L L VR LD ++ Sbjct: 274 CGE--QPLLPYE----------SCCLGSINLSRIVRNGGIDWQRLQKLTHLGVRFLDDVV 321 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 + YP + G R +G+GV+ FA+ L + G Y A + I+ Sbjct: 322 EVSTYPSEEIRAMTSGNRKIGLGVMGFAHLLIRLGIPYDSPDAERTGGEIIRLIERESKI 381 Query: 554 ASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 ASN LA+++G P F + + + L RN Sbjct: 382 ASNRLAEKRGPFPNFKGSVWDRKNLLQ-------------------------------RN 410 Query: 614 STLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQV----------VPDYEHL- 662 +T + + P+ T S ++ ++G+EP + GI +V PD + L Sbjct: 411 ATTTTIAPTGTLSILAGTSSGVEPIYDIRYKRILPGGIEVEVEDPLWRKAKDRPDADELR 470 Query: 663 HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAY 722 + +E+ +L + Q +D ++S N + +L + AY Sbjct: 471 RRLFRKAYEV-SPFAHLNIQRTFQSSVDNAVSKTVNLPET------ATADDILDIYVAAY 523 Query: 723 KFGVKTLYYQNTRD 736 + G+K + Sbjct: 524 RMGLKGTTVFRNKS 537 >UniRef50_B1HSG6 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillaceae RepID=B1HSG6_LYSSC Length = 697 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 141/660 (21%), Positives = 274/660 (41%), Gaps = 34/660 (5%) Query: 101 ALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTF-SYAAVKQLEGKYLVQN 159 + + + +V+ G Y+ ++ Y + K++ +D + F S+ + + Y +++ Sbjct: 47 DIEEKIRYLVDEGYYEKAFIDMYEMDFIKKLYKKA-YDYNFRFPSFMSASKFYDSYAMKS 105 Query: 160 RVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP- 218 R EI E + +++A L +R +A+ TP Sbjct: 106 RDGEEILEKYEDRIVIIALYLAQG-----NTVLAERSVEAMME-AYQPATPTALNSGKKA 159 Query: 219 TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 + SC + DS++SI ++ G+G+N +R LG PI+ +G Sbjct: 160 RGELVSCFKLSMDDSMNSIAENIGYCLELSRLGGGVGVNLTDLRPLGDPIKEILNRASGV 219 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 IP K + + +Q G R G+ ++ ++H ++E+ + K + R+ + G+ Sbjct: 220 IPVAKLLENSFSYSNQLGQRNGSGVVYLNIFHADIENFISSKKPNADDKIRLATLSTGII 279 Query: 339 INKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVEL 398 I + + + + +DI LFSP D+ +Y ++ E Y + + +R+ A L Sbjct: 280 IPSIFFELMKRDKDIVLFSPYDIFKVYGKRMSEISISEMYYELLDNPKIRKIKRLNARRL 339 Query: 399 FSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEI--ALPTKPLNDVN--D 454 ++ + + + +G + D+ N P I V+ SNLC EI T + D + + Sbjct: 340 YTEVKKAQFESGYPFEIFDDNVNDVHPLK-NIGRVKMSNLCTEILQVQETSVITDQDQPN 398 Query: 455 ENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDY-PIPAAKRGAMGRRTL 513 E G C L + ++ A + +++ E L A+ L + +P+ + ++ Sbjct: 399 EYGLDVSCNLGSIDIHAASKVNDFEALIDTAMHLLTNVSQMTHIKNVPSVAKANQLMHSV 458 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNETT 572 G+G +N +L G Y + + + EA+ YY LK+S E+AKE+ F ++ Sbjct: 459 GLGCMNLHGHLVTEGIMYGSKDSIHFMDRFMEAMNYYSLKSSMEMAKEKAETFYRFEDSD 518 Query: 573 YAKGILPIDTYKKDLDTIANEPLHYD----------WEALRESIKTHGLRNSTLSALMPS 622 YA GI K + ++ L W L++ + +GL +S A+ P+ Sbjct: 519 YASGIYFDQYVNKTEEELSPAVLKALGNIPIITSKMWGLLKQDVMQYGLFHSYRLAIAPT 578 Query: 623 ETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY-EHLHDAYELLWEMPGNDGYLQL 681 + S I + T I P V ++ D +P Y +++ D + L Sbjct: 579 GSISYIRSCTASISPCTERVEVRDYADSRTIYPMPHLTNENSHLYVEAYDVDPYD-LIDL 637 Query: 682 VGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDA 741 QK +DQ IS + +QL K + A+ G+K++YY R + + Sbjct: 638 YAASQKHVDQGISMTLYV------TDNWTTEQLAKVYIYAWVKGIKSVYYVRQRLQSLEE 691 >UniRef50_A2DI13 Ribonucleoside-diphosphate reductase n=1 Tax=Trichomonas vaginalis RepID=A2DI13_TRIVA Length = 614 Score = 471 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 119/662 (17%), Positives = 234/662 (35%), Gaps = 110/662 (16%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAV 200 + F+ A+K ++ +YLV N G++YE+ + ++ VA L S + ++ K+F + Sbjct: 18 LPFTSNAIKVMKARYLVHNE-EGKVYETPEQMFTRVAKALASVET--DKEKWTKKFEKVM 74 Query: 201 STFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGR 260 F+ ++ T S+CV++ DSLDSI T +GIG + Sbjct: 75 MNFEFIPAGRTLANAGAKTDLVSNCVVLHMEDSLDSIFQTLQDAALLQQAGSGIGFPFHK 134 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 +R G + +G + F + + A + Q G R GA + H ++ + K Sbjct: 135 LRPAGYKCKRTLGSSSGPLSFLRIYAEAFRIIQQHG-RHGANMAIMRVDHPDIIEFIHAK 193 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 G + ++ V R++K + + + + Sbjct: 194 EQPGTYE----NFNFSVAFTDEFMERVIKNDPSPWMCKWNGEKMAPRYITR--------D 241 Query: 381 KYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 + ++I+ + A EL + ++ + G +D N +P P + P+ N C Sbjct: 242 AAGRVENIQPLTISAPELMNEIIHLAWTNGEPGCVFIDTVNKANPL-PGLGPIECCNPCG 300 Query: 441 EIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELAILAVRALDALLDY 495 E L + C L A NL + LEE+ A+R LD ++ Sbjct: 301 EQFLHSGD------------ACNLGAINLEKFVVDGKIDFKHLEEVTRTAIRMLDNVVSL 348 Query: 496 QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKAS 555 +P+ R +G+G++ A L Y + + +Q + S Sbjct: 349 TKFPVQRVTDMFTNNRRIGLGIMGLADLLFLMKLPYDSEEGRACAEEVMKCVQDSAIDES 408 Query: 556 NELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNST 615 L E+G+ P F ++ +A + +RN++ Sbjct: 409 KRLGLEKGSFPNFEKSVWADKVPA-------------------------------MRNTS 437 Query: 616 LSALMPSETSSQISNATNGIEPPRGYVSIKAS---------------------------- 647 L+ + P+ ++S + + ++G+EP + + Sbjct: 438 LTNVAPTGSTSMLLDVSSGVEPYFALAYRRGNCLAGPMKPFVNKHLQKALEDCGCFTDKI 497 Query: 648 -----KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPS 702 + G L V E L + ++ D ++ + +QK +IS N+ Sbjct: 498 MDKILETGTLANVTEVPEQLRRVFVTSLDIKAED-HIAMQARVQKHCCNAISKTINF--- 553 Query: 703 RFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGA---EDAQDDLVPSIQDDGCESG 757 + + + +K G K T+Y +RD + ++D D C+ G Sbjct: 554 ---RREATEDDVRAGFIEGWKNGCKGLTVYRNGSRDAQVLETNVKNDKPVKTFVDTCKDG 610 Query: 758 AC 759 C Sbjct: 611 KC 612 >UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=cellular organisms RepID=A9A645_NITMS Length = 884 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 158/830 (19%), Positives = 294/830 (35%), Gaps = 157/830 (18%) Query: 7 VTKRDGSTERINLDKIHRVL-------DWAAEGLHNVSISQVELRSHIQFYDGI---KTS 56 + KR G+ N DKI + A GL + V + Q + Sbjct: 13 IRKRSGAVTAFNKDKISNAIYKALAATSKADRGLADQLADNVVNKLVEQGFTSTRSPTVE 72 Query: 57 DIHE----TIIKAAADLISRDAPDYQ--------------------------------YL 80 DI + T+I + I++ Y+ L Sbjct: 73 DIQDIVESTLIDSGNSDIAKAYIVYRHERRKLRDEKMKVLNLKALDPVSKKFDLNCLRVL 132 Query: 81 AARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGK--YDNHLLEDY--TEEEFKQMDTFID 136 A+R + + + P +++ V +V +G YD + + T+++ ++ ++++ Sbjct: 133 ASRYLFRNGKNEIIE--SPTQMFERVAILVGIGDLMYDAQVFDKSGNTKQDVEEAKSYLE 190 Query: 137 HDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA----ACLFSNYPRETRLQY 192 + + K+ ++ + A ++ ++ L + + Sbjct: 191 KLDAFDYKFKVGDYFFNKWHFRSLIN-HYVTLANKGHMKISFKELLTLLAAKKLDGYADK 249 Query: 193 VKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRA 252 + ++D + + +P M Q S+C ++ D ++ I ++S Sbjct: 250 ITEYFDLMVSQDFLPNSPTMMNAGGRLGQLSACFVLGMQDGMEEIMKSTSDAALIFKSGG 309 Query: 253 GIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLE 312 G+GIN +R G + +G + F T + QGG R GA WH + Sbjct: 310 GVGINYSDLREEGDIVASTSGVASGPVSFMNIINTVTEVVKQGGKRRGANMGIIEAWHPD 369 Query: 313 VESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLK--GEDITLFSPSDVPGLYDAFFA 370 VE + K GV + + + V + + + L+ + L SP D Sbjct: 370 VEKFITNKTEPGV----LENFNVSVGVWEDFWHALVNTSDGNYVLRSPRD---------- 415 Query: 371 DQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPF-DPA 429 + + A +L L+ + + D N ++ F Sbjct: 416 ----------------KKPVKEINAHQLIDLIALSAWKSAEPGLIFFDQINKYNVFAKAR 459 Query: 430 IAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELE 479 AP+R +N C E +L C L + NL + + E Sbjct: 460 QAPLRATNPCGEQSLYPYE------------SCNLGSINLVNLVKRQADGTYEFDWQRYE 507 Query: 480 ELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNL 539 E R LD ++D YP+P + R +G+GV+ A L K Y+ L Sbjct: 508 ETIRKTTRFLDNIIDVNHYPVPEINVASKESRRIGLGVMGVADLLYKLRIPYNSKEGYEL 567 Query: 540 THKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDW 599 K EA+ YY ++ S LAK +G P ++T Y +G +P+ Y + E Y+W Sbjct: 568 QSKLSEALTYYSMEESVALAKSRGEFPLCSKTEYPEGKIPVAGYYEK----PKESHSYEW 623 Query: 600 EALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD---------- 649 +AL E IK +G+RN + + P+ T S I++ +NG+EP V K Sbjct: 624 DALVEKIKQYGIRNVLTTTVAPTGTLSMIADCSNGMEPAFALVFEKRVTVGRFFYTNKIV 683 Query: 650 ----------------------GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQK 687 G L+ + + + D + ++ +D +L G+ Q Sbjct: 684 EQVLKENNLYNDEILAKIADNYGSLKGIDEIPQWMQDVFVTAMDIHWSD-HLMAQGVWQD 742 Query: 688 FIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTR 735 +I +I+ N V + + L A++ G+K T+Y +R Sbjct: 743 WIGNAIAKTINMPY------DVTAEDVKSAYLLAHEIGLKGITVYRDGSR 786 >UniRef50_Q2T3W9 Ribonucleotide reductase system n=37 Tax=Burkholderiales RepID=Q2T3W9_BURTA Length = 881 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 132/650 (20%), Positives = 228/650 (35%), Gaps = 97/650 (14%) Query: 146 AAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKI 205 ++ L KY + +A +Y VA + P E R + RF + + + Sbjct: 53 FSIDVLLEKYAKGDER------TADDIYRRVARGVAQAEPPELRDEIEARFVEHLQRGAL 106 Query: 206 SLPTPIMSGVRTP-TRQFSSCVLIECGDSLDS--------INATSSAIVKYVSQRAGIGI 256 IMS + +C + GD + I + + + G+G Sbjct: 107 G-AGRIMSAAGSSIAATLINCFVQPVGDCIQGVDERGLPGIYVALLQAAETMRRGGGVGY 165 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 N IR G+ + + +G + F + ++ G R GA H ++ Sbjct: 166 NFSAIRPRGAYVHSTGSSASGPCSYIDVFDASCRTVESAGARRGAQMAVLDCDHPDLLEF 225 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 + K+++G R + + V + + + L A A + Sbjct: 226 IEAKHSKG----RWNNFNISVAVTDAFMNAVEQDLPWQLV---HRAEPSPALRAAGD--- 275 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 D +A ++ +M+ + + N + AI +R + Sbjct: 276 ---LHRRDDGMWVYAERRARAIWDKIMRSTYDVAEPGVVFISKMNDDNNLR-AIESIRAT 331 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNL--------------GAINNLDELEELA 482 N C E LP C L NL ++ + D L E Sbjct: 332 NPCGEQPLPA------------YGCCNLGPLNLTRFVIDPFARLDGGESVFDWDALAERT 379 Query: 483 ILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHK 542 VR LD +LD +P+P + A +R +GIG L G RY + + Sbjct: 380 RTQVRFLDDVLDVTLWPLPEQRHEAQQKRRIGIGFTGLGDTLVMLGLRYDAQEGRDFAAR 439 Query: 543 TFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEAL 602 ++ +AS ELA E+GA P F+ + Y L T+ L + + Sbjct: 440 VAREMRDAAYRASVELACERGAFPLFDASRY----LEEGTFASRLP-----------DDI 484 Query: 603 RESIKTHGLRNSTLSALMPSETSSQ--ISNATNGIEPPRGYVSIKA--SKDG-------- 650 RE+I+ G+RNS L ++ P+ T S NA+NGIEP + + DG Sbjct: 485 REAIRRDGIRNSHLLSIAPTGTVSLAFADNASNGIEPAFSWTYQRTKIMADGSRQTFAVE 544 Query: 651 -----ILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 + R++ D + L + +M +D +L ++ +Q +ID SIS N Sbjct: 545 DYAYRLYRELGGDVDALPGYFVSALQMSAHD-HLAMMAAVQPYIDTSISKTVNVP----- 598 Query: 706 SGKVPMQQLLKDLLTAYKFGVKTL--YYQNTRDGAEDAQDDLVPSIQDDG 753 P A+K G+K L Y N GA + ++++ Sbjct: 599 -ADYPFDDFESLYFDAWKSGLKGLATYRPNETLGAVLHTSEPDDTLEEAD 647 >UniRef50_C6D5S5 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Paenibacillus RepID=C6D5S5_PAESJ Length = 864 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 125/617 (20%), Positives = 247/617 (40%), Gaps = 70/617 (11%) Query: 159 NRVTGEIYESAQFLYILVAACLFSNY-PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRT 217 ++T I ++ + ++ +A + E R + +RF + +K+ I +G Sbjct: 76 EKLTLTIEKTPEEMWNRLAGAMAGVEQGEEKRRTWTERFRYILDDWKLVPGGRIAAGAGA 135 Query: 218 PTR-QFSSCVLIE-CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFH 275 +C +I DS I T S + + +++ G+GIN +R + + G Sbjct: 136 SDELTLFNCYVIPSPKDSRGGIMTTLSEMTEIMARGGGVGINLSSLRPRRAVVAGVNGSS 195 Query: 276 TGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDY 335 +G + + F QGG R GA L WH +V + +K G +V + + Sbjct: 196 SGAVSWGGLFSYTTGLIEQGGSRRGALMLMINDWHPDVLDFITVKQTMG----QVTNANL 251 Query: 336 GVQINKLMYTRLLKGEDITLFSPSDVPGLYDA-FFADQEEFERLYTKYEKDDSIRKQRVK 394 V ++ + + D L P YD + D E +++L K + + V+ Sbjct: 252 SVCVSNAFMKAVKEDLDWELVFPDTKETDYDELWDGDLEAWKKLGKKV-----VHYKTVR 306 Query: 395 AVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND 454 A +++ +++ + + +++ N S P+ +N C E LP Sbjct: 307 ARDVWHTIIESAWKSAEPGVVFMEYYNQMSN-SWYFNPIICTNPCGEQGLPGW------- 358 Query: 455 ENGEIALCTLSAFNLGAINN-------LDELEELAILAVRALDALLDYQDYPIPAAKRGA 507 +C LSA NL + +EL ++ +VR LD ++D Y ++ Sbjct: 359 -----GVCNLSAINLSKFYDESKHDVNWEELGKVTQWSVRFLDNVIDTTPYHFEENEKNQ 413 Query: 508 MGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW 567 R +G+G + A + K G RY + K + + AS E+A E+G+ Sbjct: 414 KKERRVGLGTMGLAELMIKLGVRYGSPESLLFLDKIYGFMAREAYLASAEIASEKGSFEA 473 Query: 568 FNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQ 627 F+ + + + + ++ + E++ G+RN T+ P+ ++ Sbjct: 474 FDAEKFLQSGF-------------MKNMVSEFPEVGEAVLAKGMRNVTVITQAPTGSTGT 520 Query: 628 ISNATNGIEPPRGYVSIKASKDGILRQVVPDY---------EHLHDAYELLWEMPGNDGY 678 + + GIEP + + S+ G +Q+VP E L D + + D + Sbjct: 521 MVGTSTGIEPYFAFEYFRQSRLGFDKQLVPIAQAWKDAHPGEELPDYFVTAMNLSAKD-H 579 Query: 679 LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 +++ +Q+++D SIS N +++ + A+ G K T+Y RD Sbjct: 580 IRVQAAIQRWVDSSISKTANCP------SDFTVEETKELYEMAFDLGCKGVTIY----RD 629 Query: 737 GAEDAQDDLVPSIQDDG 753 G+ D Q ++ + +DD Sbjct: 630 GSRDVQ--VLSTKKDDE 644 >UniRef50_C6IVG4 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillales RepID=C6IVG4_9BACL Length = 864 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 124/601 (20%), Positives = 239/601 (39%), Gaps = 66/601 (10%) Query: 159 NRVTGEIYESAQFLYILVAACLFSNYP-RETRLQYVKRFYDAVSTFKISLPTPIMSGVRT 217 ++T I ++ + ++ +A + S E + ++ ++F + +K+ I +G Sbjct: 81 EKLTLNIEKTPEEMWDRLAKAMASVEETPEKQKEWEEKFRYILDDWKLVPGGRIAAGAGA 140 Query: 218 PTR-QFSSCVLIE-CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFH 275 +C +I DS I T S + + +++ G+GIN +R + +RG Sbjct: 141 SDELTLFNCYVIPSPKDSRGGIMETLSEMTEIMARGGGVGINLSSLRPRRAIVRGVNGSS 200 Query: 276 TGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDY 335 +G + + F QGG R GA L WH +V + +K G +V + + Sbjct: 201 SGAVSWGGLFSYTTGLIEQGGSRRGALMLMINDWHPDVLDFITVKQTMG----QVTNANL 256 Query: 336 GVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS--IRKQRV 393 V ++ + + D L P Y+ E ++ K++ D I + V Sbjct: 257 SVCVSNAFMKAVKEDLDWDLVFPDTTYEDYN------EVWDGDLDKWKADGRKVIHYRTV 310 Query: 394 KAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN 453 KA E++ +++ + + +++ N S P+ +N C E LP Sbjct: 311 KAREIWHTIIESAWKSAEPGVVFMEYYNQMSN-SWYFNPIICTNPCGEQGLPGW------ 363 Query: 454 DENGEIALCTLSAFNLGAINN-------LDELEELAILAVRALDALLDYQDYPIPAAKRG 506 +C LSA NL + DEL +VR LD +++ Y ++ Sbjct: 364 ------GVCNLSAMNLSKFYDEEKHDVAWDELATTTRYSVRFLDNVINKTPYHFEENEKN 417 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 R +G+G + A + K RY + K + I AS ++A+E+G+ P Sbjct: 418 QKKERRVGLGTMGLAELMIKLNIRYGSPESLEFLDKLYGFIAKEAYLASADIAEEKGSFP 477 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 F + + + + + E+++T G+RN T+ P+ ++ Sbjct: 478 AFEADKFLQSGFMKNMTEVYP-------------EVGEAVRTKGIRNVTIITQAPTGSTG 524 Query: 627 QISNATNGIEPPRGYVSIKASKDGILRQVVPDYEH---------LHDAYELLWEMPGNDG 677 + + GIEP + + S+ G Q VP + L D + ++ D Sbjct: 525 TMVGTSTGIEPYFAFKYYRQSRLGFDEQFVPIAQEWMDAHPGEPLPDYFVTAMDLSAED- 583 Query: 678 YLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTR 735 ++++ +Q+++D SIS N PS F ++ + A+ G K T+Y +R Sbjct: 584 HIRVQAAIQRWVDSSISKTANC-PSDF-----TVEDTKRLYELAFDLGCKGVTIYRDGSR 637 Query: 736 D 736 D Sbjct: 638 D 638 >UniRef50_Q6AJC4 Ribonucleoside-diphosphate reductase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJC4_DESPS Length = 785 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 124/705 (17%), Positives = 232/705 (32%), Gaps = 133/705 (18%) Query: 93 AYGQFEPPALYDHVVKMVEMGKYDNHL-LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQL 151 F Y + + G N+ L Y + +K++ D + + A L Sbjct: 16 TLDIFAVFWGYMVFLSLNRKGYPANYFYLIQYKNDIYKEVIMAPDVM-EQVLTTTAETVL 74 Query: 152 EGKYLVQNRVTGEIYESAQFLYILVAACLF-----SNYPRETRLQYVKRFYDAVSTFKIS 206 +Y +++ G E + L VA + Q F+ + Sbjct: 75 ARRYYLKD-DAGNSLEDWKALAHRVAEAVAPEDATGKNEVTGIKQLRDDFFTMIYQLDFL 133 Query: 207 LPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGS 266 +P + T Q S+C ++ DS+D I G G + RIRA + Sbjct: 134 PNSPCLMNAGTEIGQLSACFVLPVEDSMDGIFTAIRNGALVHKTGGGTGYSFSRIRACNA 193 Query: 267 PIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVE 326 ++ +G + F F A ++ QGG R GA + H ++ + + K + Sbjct: 194 SVKSTHGVASGPLSFAAVFDAATETIKQGGKRRGANMGVLRVDHPDIMAFISAKE----D 249 Query: 327 GNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDD 386 ++ + ++ V I L L ++ L PS Sbjct: 250 QDKFNNFNFSVAITDLFMAALEADKEYDLIEPST-------------------------- 283 Query: 387 SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPT 446 ++ AVE+F+ ++ G + +D N + P + +N C E L Sbjct: 284 GEVMGQLNAVEVFAKIVDLAWHNGEPGVLFIDAANRDNT-TPQLGDFEATNPCGEQWL-- 340 Query: 447 KPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALDALLDYQDYPIP 501 C L + NLG + L ++ A LD ++D +PIP Sbjct: 341 ----------LPYESCNLGSINLGNFVKNDEVDYSRLGQIVKTATCFLDNVIDCNVFPIP 390 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 + R +G+G++ L + Y L + + I+ + S +LA+E Sbjct: 391 EIGEMTLKTRKIGLGIMGLHDLLIQLAIPYGSEEGRLLAAEVMQFIRDRCEEQSRKLAEE 450 Query: 562 QGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHG-LRNSTLSALM 620 +GA P ++ I + RN+ L+++ Sbjct: 451 KGAFPAYD----------------------------------AEINLYPARRNAALTSIQ 476 Query: 621 PSETSSQISNATNGIEPPRGYVSIKASKD------------------------------- 649 P+ T S I++ +G EP V +K D Sbjct: 477 PTGTVSMIADCASGCEPYFSIVMMKHVMDGDRLLMVNKHFEKIAREQGFYSDDLMVKVAE 536 Query: 650 -GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKF-IDQSISANTNYDPSRFPSG 707 G + E +A+ ++ D ++++ I+Q +D SIS N + Sbjct: 537 SGTVVGHAEIPEKWQEAFRTAQDISPED-HIRMQAILQNSGVDSSISKTINLPKT----- 590 Query: 708 KVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQ 750 + + ++ YK G K T+Y +RD + + + Sbjct: 591 -ATREDVKYSYISGYKLGCKGLTVYRDGSRDDQVLNTTEQSRASE 634 >UniRef50_B4W8S5 Ribonucleoside-diphosphate reductase n=2 Tax=Caulobacteraceae RepID=B4W8S5_9CAUL Length = 753 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 134/618 (21%), Positives = 229/618 (37%), Gaps = 111/618 (17%) Query: 168 SAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR-QFSSCV 226 + + + VAA L P +TR ++ RF + + ++ I++G T +C Sbjct: 28 TVEATWDRVAAALAEAEPTKTRARWRARFRETLDAYRFLPAGRILAGAGTGRAVTLFNCF 87 Query: 227 LIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHF 285 ++ D LD I + Q G+G++ +R G+ +RG A +G + F + Sbjct: 88 VMGVVPDDLDGIFQHLREAAVTLQQGGGVGMDFSTVRPSGALVRGVGAEASGPLSFMDVW 147 Query: 286 QTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYT 345 + ++ G R GA + H ++E+ + K + R R+ + V + Sbjct: 148 DSMCRTIMSAGQRRGAMMGCLRIDHPDIEAFIDAKR----DAVRFRNFNLSVLVPDAFMA 203 Query: 346 RLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQE 405 L D L D ++ V+A +L++ +MQ Sbjct: 204 ALDADADWPLVF----------------------------DGEIRRTVRATDLWTRLMQA 235 Query: 406 RASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLS 465 + +D N + + SN C E LP C L Sbjct: 236 TYDAAEPGVIFIDRVNAANNL-AHCEVIAASNPCGEQMLPP------------YGACLLG 282 Query: 466 AFNLGAIN----------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGI 515 + NL + + +L +L AVR LD ++D +P+PA + A +R LG+ Sbjct: 283 SINLARLVSAPFEPDAALDEQKLADLTRTAVRMLDNVIDISRFPLPAQEAEARAKRRLGL 342 Query: 516 GVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAK 575 GV A L G RY + A LT + I+ +AS ELA E+GA P ++ Sbjct: 343 GVTGLADALIFCGARYGEDRAVALTGRWLGLIRREAYRASAELAAEKGAFPLYD------ 396 Query: 576 GILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISN-ATNG 634 P + +L ++ E RE I HGLRN L+++ P+ T+S ++ ++G Sbjct: 397 ---PAMLQRPNLASLDAET--------RELIGLHGLRNGCLTSIAPTGTTSLLAGNVSSG 445 Query: 635 IEPPRGYVSIKASK--DGILRQVVPDYEHLHDAYELLWE--------------------- 671 IEP + + DG R+ E + D LW+ Sbjct: 446 IEPVFAFAYTRKVMQPDGTRRE-----EAVEDYALALWKTLKGPDAPLDSAPGDAFVSAQ 500 Query: 672 MPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TL 729 + +L++ Q ID SIS N + + Y+ G K T Sbjct: 501 TLTPEHHLRMQAAAQAQIDSSISKTINCP------ENIDFEAFSDVYRQGYRMGCKGLTT 554 Query: 730 YYQNTRDGAEDAQDDLVP 747 Y N G+ + + Sbjct: 555 YRPNAITGSVLSVESPAS 572 >UniRef50_C6QBB0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyphomicrobiaceae RepID=C6QBB0_9RHIZ Length = 809 Score = 450 bits (1158), Expect = e-125, Method: Composition-based stats. Identities = 125/625 (20%), Positives = 222/625 (35%), Gaps = 100/625 (16%) Query: 151 LEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQ--YVKRFYDAVSTFKISLP 208 KY + ++ + + VA S R Q + FY+A++ F Sbjct: 16 WRRKYRFGGSPSVAADQTLEDTFRRVALAAASAEKGGKRQQQKWAGTFYEAMADFGFQPA 75 Query: 209 TPIMSGVRTPTR-QFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGS 266 I++G T +C ++ E D L SI + + GIG + +R G+ Sbjct: 76 GRILAGAGTDRNVTLFNCFVLGEIADDLSSIFESVKEAALTMQSGGGIGHDFSTLRPRGA 135 Query: 267 PIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVE 326 P++ A +G + F + ++ G R GA H ++E+ + K + Sbjct: 136 PVKSIGADASGPVSFMDVWDAMCRTIMSAGQRRGAMMATLRCDHPDIEAFIAAK----AD 191 Query: 327 GNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDD 386 R+R+ + V + + + L Sbjct: 192 SQRLRNFNLSVLVTDAFMDAVRRDAPWDLIF----------------------------S 223 Query: 387 SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPT 446 + + A L+ +M+ + +D N + + +N C E LP Sbjct: 224 GKVYKTIPARALWDQIMRATFDYAEPGVIFIDRINAANNLQ-YCETISATNPCGEQPLPP 282 Query: 447 KPLNDVNDENGEIALCTLSAFNLG----------AINNLDELEELAILAVRALDALLDYQ 496 C L + NL A ++ +LE AVR LD ++D Sbjct: 283 ------------YGACLLGSINLARLVEEPFTATAHVDIAKLEARVATAVRFLDNVIDIS 330 Query: 497 DYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASN 556 YP+P + A +R +G+GV A L G Y +A + IQ +AS Sbjct: 331 RYPVPQQAQEARAKRRIGLGVTGLADALIFLGLPYGSAAAREQAARWMAIIQNAAYRASA 390 Query: 557 ELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTL 616 LA E+GA P ++ + T N D +RE+I +GLRN L Sbjct: 391 ALAAEKGAFPLYD--------------ANVVLTRPNITRLDD--DVREAIAANGLRNGCL 434 Query: 617 SALMPSETSSQISN-ATNGIEPPRGYVSIKASK---DGILRQVVPDYEH----------- 661 +++ P+ T S ++ ++GIEP +V + G + V D+ H Sbjct: 435 TSIAPTGTISLLAGNVSSGIEPVFDFVFRRRVLSDGGGAEEETVEDFAHRAFRDAFGDDA 494 Query: 662 -LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 L +A+ E ++ + +Q ++D +IS N + + + Sbjct: 495 VLPEAFVTA-ETLTPSEHVAMQATLQPYVDSAISKTINCP------EDISFESFRDIYIE 547 Query: 721 AYKFGVK--TLYYQNTRDGAEDAQD 743 AY G+K T Y N G+ +++ Sbjct: 548 AYDSGLKGCTTYRPNAITGSVLSRE 572 >UniRef50_Q2RP92 Ribonucleotide reductase large subunit n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RP92_RHORT Length = 786 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 127/628 (20%), Positives = 229/628 (36%), Gaps = 73/628 (11%) Query: 151 LEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTP 210 KY + + + + + + V +++ PR R + +A+ + Sbjct: 11 WREKYRLVDPDGSSLEQGPEDSFARVCRGIYARDPR--RAVHEPLALEAMKALEWCPGGR 68 Query: 211 IMSGVRTPTR-QFSSCVL-IECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPI 268 I +G T R +C + + D +D I + + Q GIG + +R G+ + Sbjct: 69 IHAGAGTDRRVTLINCFVNMIVPDRMDGIMEALTRAALTMQQGGGIGTDFSTLRPRGAKV 128 Query: 269 RGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGN 328 R + +G + F + + + GG R GA H ++ + + K G Sbjct: 129 RRTGSVSSGPLSFMEIWHAMCGTIMSGGARRGAMMGTMICDHPDLPAFITAKAQAG---- 184 Query: 329 RVRHMDYGVQINKLMYTRLLKGEDITL---FSPSDVPGLYDAFFADQEEFERLYTKYEKD 385 R+ + + V + + + L P+D L A E + YE Sbjct: 185 RLTNFNVSVLVTDAFMRAVDEDATWDLGFSVPPADPARL----VAVTERNGEPWYVYE-- 238 Query: 386 DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALP 445 R+ A L+ +++ + +D N + + +N C E LP Sbjct: 239 ------RLSARALWEKIIRTTYDHAEPGVIFIDRVNERNNL-AYCETISCTNPCGEQPLP 291 Query: 446 TKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKR 505 P D N +A+ F A + L E+A + VR LD +LD ++P+ + Sbjct: 292 --PNGDCNLGCVNLAVLVRDPFTPQARFDDARLAEVAAIGVRFLDNVLDVSNFPVEDQAK 349 Query: 506 GAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGAC 565 A +R LG+G++ L G RY +A T + ++ +AS ELA E+G Sbjct: 350 EAQAKRRLGLGIMGLGNALQMLGLRYGSPAAIAETRRIMALLRDAAYRASAELAGERGPF 409 Query: 566 PWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETS 625 P ++ +A + + LR I GLRN + + P+ T+ Sbjct: 410 PLYDRD----------------QLLARPFIQELPDDLRAKIAEQGLRNGVMLTIAPTGTT 453 Query: 626 S-QISNATNGIEPPRGYVSIKASK--DG---ILRQVVPDYEH----------------LH 663 + +N ++G+EP G+ + DG + +E L Sbjct: 454 AIYYNNVSSGLEPTFGWRYFRKVLRPDGGHDEFAVIDAGFESWCRTRGLDPATAPLTGLP 513 Query: 664 DAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYK 723 D+ E+ D +L++ Q+FID SIS N + AY+ Sbjct: 514 DSMVTALELSVED-HLRMQAACQEFIDASISKTINCP------ADMSYDSFAAVYKLAYE 566 Query: 724 FGVK--TLYYQNTRDGAEDAQDDLVPSI 749 G K T Y + G+ + D P+ Sbjct: 567 MGCKGCTTYRPSGTRGSVLSLDATTPAA 594 >UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=cellular organisms RepID=C1DPR2_AZOVD Length = 1338 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 132/505 (26%), Positives = 204/505 (40%), Gaps = 62/505 (12%) Query: 285 FQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMY 344 + T GG R GA + WHL++E L L+ N G + R M+ I L Sbjct: 811 YMTTSGLAHNGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFM 870 Query: 345 TRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK-QRVKAVELFSLMM 403 R+ + TLFSPSDV L+D EE Y + I+ + + A +L+ M+ Sbjct: 871 KRVFEDGQWTLFSPSDVRDLHDLTGRAFEERYEYYEALTQYGKIKLFKTIAAKDLWRKML 930 Query: 404 QERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCT 463 TG ++ D CN SP + V SNLC EI L T + EIA+C Sbjct: 931 SMLFETGHPWLTFKDPCNLRSP-QQHVGVVHSSNLCTEITLNTS--------DSEIAVCN 981 Query: 464 LSAFNLGAIN-----NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVI 518 L + NL + ++L AVR LD ++D Y + A+ R +G+G++ Sbjct: 982 LGSINLVNHINDGRLDTEKLSRTVKTAVRMLDNVIDINYYSVDTARNANFRHRPVGLGIM 1041 Query: 519 NFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGIL 578 F L Y +A ++ EAI YY ++AS +LA+E+GA F + +++GIL Sbjct: 1042 GFQDALYLQHIAYGSEAAIAFADRSMEAISYYAIQASCDLAEERGAYSSFEGSLWSRGIL 1101 Query: 579 PIDTYKKDLDTIA------NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNAT 632 P+D+ + + DW LRE +K G+RNS + A+ P+ T S I + Sbjct: 1102 PLDSLDILAEQRGTKYIEVDRSSTLDWAPLRERVKK-GMRNSNIMAIAPTATISNIVGVS 1160 Query: 633 NGIEPPRGYVSIKASKDGILRQVVPDYEH------------------------------- 661 IEP + +K++ G + P H Sbjct: 1161 QSIEPTYQNLYVKSNLSGEFTVINPYLVHDLKARELWDGVMVNDLKYYDGSVQQIERIPT 1220 Query: 662 -LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 L Y +E+ ++ QK+IDQ+ S N + V Sbjct: 1221 DLKALYATAFEVET-KWIVEAASRRQKWIDQAQSLNLYIAGASGKKLDVT-------YRM 1272 Query: 721 AYKFGVKTLYYQNTRDGAEDAQDDL 745 A+ G+KT YY + + Sbjct: 1273 AWFRGLKTTYYLRALAATSAEKSTI 1297 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 77/303 (25%), Positives = 131/303 (43%), Gaps = 15/303 (4%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHET 61 + ++ V + DG +++ ++ ++ A EGL V + ++ + YDG+ D++ Sbjct: 145 HPSIRVARADGVLVPLDMGRLDTIIGEACEGLAEVDAALIQKETLKNLYDGVAEKDVNTA 204 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYG---------QFEPPALYDHVVK-MVE 111 ++ A L+ R+ P+Y Y+ ARL + LR +A G E LY + VE Sbjct: 205 LVMTARTLVERE-PNYSYVTARLLMDTLRAEALGFLGVAESATHHEMADLYARALPVYVE 263 Query: 112 MGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQF 171 G L E + ++ +DH+RD F+Y ++ L +Y + G +E Q Sbjct: 264 KGIEFELLDPKLREFDLVRLGAALDHERDQQFTYLGLQTLYDRYFLHK--DGIRFELPQV 321 Query: 172 LYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG 231 ++ VA L P++ + FY+ +S+F TP + T Q SSC L Sbjct: 322 FFMRVAMGLAIEEPQK--EERAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVP 379 Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS 291 D L I G+G + +RALGS I+G G +PF K + Sbjct: 380 DDLSGIYNAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVA 439 Query: 292 CSQ 294 +Q Sbjct: 440 VNQ 442 >UniRef50_B3SZX1 Putative Ribonucleotide reductase, barrel domain protein n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZX1_9ZZZZ Length = 817 Score = 447 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 135/690 (19%), Positives = 258/690 (37%), Gaps = 115/690 (16%) Query: 104 DHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFID------------HDRDMTFSYAAVKQL 151 + + GK + L EE +++ +D + L Sbjct: 3 EAIELNFPSGKTTSGELNMMVEETVRELTKEVDGQNISEEFTPYLTENYYKDDSLGADVL 62 Query: 152 EGKYLVQNRVTGEIYESAQFLYILVAACLFSNY-PRETRLQYVKRFYDAVSTFKISLPTP 210 + KYL L+ A L S ++ R + K+FY + F+ + Sbjct: 63 KNKYLAPWEN------HPYELWQRQAKALASVERTKKLRDTWEKKFYYILEDFRFTPGGR 116 Query: 211 IMSGVRTP--TRQFSSCVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSP 267 IM G T ++C ++ DS++SI T + G G + +R G Sbjct: 117 IMHGAGREDITTTLNNCYVVGIQDDSINSIYRTIEEEARTYKYGGGCGHDLSVLRPSGDA 176 Query: 268 IRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEG 327 I+G G + F F + +Q G R GA + H ++E + +K + Sbjct: 177 IKGTGGESCGPVGFMNLFSENTNTIAQHG-RRGANMQTLRVDHPDIEKFIEIKTG---DI 232 Query: 328 NRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS 387 + V++ + V + + + L + +D Sbjct: 233 HMVKYSNISVLLTHRFMEAVENDSEFDL---------------------------KWNDQ 265 Query: 388 IRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTK 447 + K +KA +L++ +++ ++ + D + + +P+ +N C E LP Sbjct: 266 VYK-TIKARQLWNKIIEHAHTSAEPGLLFWDTMIDYHNAE-YCSPLVSTNPCAEQPLP-- 321 Query: 448 PLNDVNDENGEIALCTLSAFNLGAINN------LDELEELAILAVRALDALLDYQ--DYP 499 + C L + NL + +DE ++ +A R LD ++DY + Sbjct: 322 ----------DGGCCNLGSINLERFVDGEGNFMIDEFKDTVGIATRFLDNVIDYNLERHA 371 Query: 500 IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELA 559 + + K A R +G+G++ L + G +Y A + + + + S ELA Sbjct: 372 LESQKDNATKDRRIGLGILGLGDMLVRMGIKYDSDDAIQTVEQVMQIFRDGAYETSVELA 431 Query: 560 KEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSAL 619 E+G+ P F+ Y K I N P + L IK +G+RNST+ + Sbjct: 432 NEKGSFPSFDWAGYRKSQF-----------IKNLPRN-----LNNKIKENGIRNSTVLTV 475 Query: 620 MPSETSSQISNATNGIEPPRGYVSIKASKDG---------------ILRQVVPDYEHLHD 664 P+ + + ++ T+GIEP + K I++++ + E+L D Sbjct: 476 PPTGSGAIVARVTSGIEPIFATSYTRRVKKNDGFGKTFNEYKVYHPIIKKLFGNDENLPD 535 Query: 665 AYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKF 724 ++ +++ G++QK+ID SIS+ N V ++ + +TAYK Sbjct: 536 YVISAHDIDPY-SRVKMQGVIQKYIDSSISSTVNL------KEDVTLETVADIYMTAYKT 588 Query: 725 GVK--TLYYQNTRDGAEDAQDDLVPSIQDD 752 G+K T+Y + +R+G + D Sbjct: 589 GLKGITVYREGSREGILITEKPEKDKKSKD 618 >UniRef50_Q76Z42 NrdA-A aerobic NDP reductase large subunit n=1 Tax=Aeromonas phage Aeh1 RepID=Q76Z42_9CAUD Length = 473 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 237/447 (53%), Positives = 306/447 (68%), Gaps = 6/447 (1%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 +LV K G TE K+ ++L +A G + +++ DG+ T +I + IK Sbjct: 1 MLVRKSSGITENFEPKKLLKILGFATAG-TRIDPNEILNGIMPSITDGMSTKNIQKLAIK 59 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYT 124 AAD IS + DYQY+AARL ++ +RK Y QF+P L H + +V+ G YD L +T Sbjct: 60 FAADRISIEQSDYQYVAARLQMYAIRKDVYNQFDPIHLKRHTLDLVQDGIYDKDLAIKWT 119 Query: 125 EEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY 184 ++EF +++ +I HDRD +YA V Q + KYL ++R T +IYE+ Q LY+LVA CL + Sbjct: 120 DDEFNELNAYIKHDRDFDLAYAGVMQFKEKYLAKDRSTDQIYETPQILYMLVAMCLHQDE 179 Query: 185 PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAI 244 + R+ VK FYD S K+SLPTPI++GVRTPTRQFSSCV IE GD LDSINAT+S+I Sbjct: 180 KTD-RIAKVKNFYDVTSLGKLSLPTPILAGVRTPTRQFSSCVKIESGDELDSINATASSI 238 Query: 245 VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL 304 V Y+S+RAGIGIN G IRA GS IR GE HTG IPF+K+FQTAVKSCSQGGVRGGAATL Sbjct: 239 VDYISKRAGIGINGGAIRAEGSRIRSGEVRHTGIIPFWKYFQTAVKSCSQGGVRGGAATL 298 Query: 305 FYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPG- 363 +YPMWHLEVE +LVLKNN+GVE NR+R +DYG+QINKL + RL + ITLFSP G Sbjct: 299 YYPMWHLEVEKILVLKNNKGVEENRIRQLDYGIQINKLFFERLKNDDYITLFSPDVQNGE 358 Query: 364 LYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTH 423 LYD F+ D +F+ LY E + RK+R+KA ELF+L QER TGRIY VD+ N+ Sbjct: 359 LYDLFYKDPVKFKELYEMLENEPWCRKKRIKASELFNLFAQERTGTGRIYPMFVDNVNSA 418 Query: 424 SPFDPAIAPVRQSNLCLEIALPTKPLN 450 +P+ P+R NLC+EIALPT P+ Sbjct: 419 TPYKE---PIRMGNLCIEIALPTVPMG 442 >UniRef50_Q11ZE1 Ribonucleotide reductase large subunit n=2 Tax=Burkholderiales RepID=Q11ZE1_POLSJ Length = 858 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 132/648 (20%), Positives = 225/648 (34%), Gaps = 103/648 (15%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKIS 206 ++ L KY + T E+ ++ VA + E R +Y + F+D + I Sbjct: 21 SIDVLLEKYAKGDEFT----ET--EIFARVAKGIAQAEQPELREKYERVFFDNMMRGAIG 74 Query: 207 LPTPIMSGVRTP-TRQFSSCVLIECGDSLDS--------INATSSAIVKYVSQRAGIGIN 257 IMS T ++C + GD++ I + + + G+G + Sbjct: 75 -AGRIMSAAGTGIKATLANCFVQPVGDAIQGVDTEGYPGIYEALREAAETMRRGGGVGYD 133 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 RIR GS ++G + +G + F + K+ G R GA + H ++ + Sbjct: 134 FSRIRPRGSVVKGTASSASGPCSYIDVFDASCKTVESAGARRGAQMGVMKISHPDILEFI 193 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFER 377 K G R + + V I + E L ++ E+ Sbjct: 194 TAKREVG----RWNNFNVSVGIVDGFMAAVEANEMWPLVHKAEPS---------VEQQRA 240 Query: 378 LYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSN 437 E D + V A E++ +M+ I +D N + + + +N Sbjct: 241 GAYLRESDGLWVYREVPAAEIWDTVMKSCYDFAEPGIVFLDLMNLDNNL-SYVETIEATN 299 Query: 438 LCLEIALPTKPLNDVNDENGEIALCTLSA--FNLGAINNLDELEELAILAVRALDALLDY 495 C E LP D+ G I L + F A + + + + R LD +L Sbjct: 300 PCAEQPLPPYGCCDL----GPIILPKFVSRAFTERAAFDDEGFKAAVKIQTRFLDNVLSV 355 Query: 496 QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKAS 555 +P+ ++ A +R +G G LA G RY+ + ++ +AS Sbjct: 356 THWPLEQQRKEAEAKRRIGAGFTGLGDMLAMLGIRYNSIEGVEFSRHVALMMRDAAYEAS 415 Query: 556 NELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNST 615 +LA E+G P F+ Y L T+ L ++L++ I+ HG+RNS Sbjct: 416 IDLAIEKGPFPLFDADKY----LKKGTFASRLP-----------KSLKDRIRRHGIRNSH 460 Query: 616 LSALMPSETSSQ--ISNATNGIEPPRGYVSIKASKDGILRQVVPDYEH------------ 661 L ++ P+ T S NA+NGIEPP + + G +H Sbjct: 461 LLSIAPTGTVSLAFADNASNGIEPPFALAYTRKKRVGDGHVNYNVVDHAFRVFLETVCAQ 520 Query: 662 ------------LHDAYE-----------------LLWEMPGNDGYLQLVGIMQKFIDQS 692 A+E EM + +L ++ +Q ID + Sbjct: 521 ELRAPLLEAVSRYQPAFEVAGKTYQVKDCIPPSIVTAQEMSAAE-HLAVMAAVQPLIDTA 579 Query: 693 ISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL--YYQNTRDGA 738 IS N P + A+K +K L Y N GA Sbjct: 580 ISKTVNVP------EDYPYDDFKNLYMQAWKANLKGLATYRPNKTLGA 621 >UniRef50_Q2N7C2 Ribonucleoside-diphosphate reductase n=90 Tax=root RepID=Q2N7C2_ERYLH Length = 681 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 148/641 (23%), Positives = 228/641 (35%), Gaps = 125/641 (19%) Query: 135 IDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVK 194 ID RD+ + + L +YL+ E Q L+ VA ++ + Sbjct: 87 IDESRDVNLTEFGKETLIDRYLLPG-------EKFQDLFARVADAYA------DDQEHAQ 133 Query: 195 RFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGI 254 R YD +S TP++S T SC L DSLD I T + V S+ GI Sbjct: 134 RLYDYISRLWFMPATPVLSNGGTNRGLPISCYLNSVSDSLDGIVGTWNENVWLASKGGGI 193 Query: 255 GINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVE 314 G G +R +G P+ G +G IPF + + + SQG +R G+A + + H E+E Sbjct: 194 GTYWGNVRGIGEPV-GLNGKTSGIIPFVRVMDSLTLAISQGSLRRGSAACYIDIHHPEIE 252 Query: 315 SLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEE 374 L ++ G + ++ +GV I + +G + L SP D Sbjct: 253 EFLEIRKPSGDFNRKALNLHHGVLITDAFMEAVREGAEFDLKSPKD-------------- 298 Query: 375 FERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP--FDPAIAP 432 + V A LF +++ R +TG YI D N P Sbjct: 299 ------------GSVRGTVDARSLFQKLVETRLATGEPYIVFADTVNRMMPKHHRDLGLK 346 Query: 433 VRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDAL 492 V SNLC EI LPT + ND A+C LS+ NL + + ++ +R LD + Sbjct: 347 VSTSNLCSEITLPTGVDHLGND---RTAVCCLSSLNLEKWDEWNGEKDFIEDVMRFLDNV 403 Query: 493 ----LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQ 548 +D + AK A R++G+GV+ F +L A K F+ I Sbjct: 404 LQDYIDRAPDEMARAKYSASRERSVGMGVMGFHSFLQSKNLPLEGPMAKAWNDKMFKQIH 463 Query: 549 YYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKT 608 +AS LAKE+G CP E + Sbjct: 464 AKANEASMLLAKERGPCPDAEEMGAME--------------------------------- 490 Query: 609 HGLRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKASKDGILRQVVP---------- 657 R S A+ P+ + S I + IEP + + G P Sbjct: 491 ---RFSCKMAIAPTASISIICGGTSACIEPIPANIYTHKTLSGSFIVKNPYLEKLLKKKS 547 Query: 658 ---------------DYEHL-------HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISA 695 HL ++ +E+ L+ +IDQ+ S Sbjct: 548 KDSTAVWNSILERGGSVAHLDFLTPEEKAVFKTSFEI-DQRYLLEFAADRAPYIDQAQSL 606 Query: 696 NTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRD 736 N F V L+ A++ G+K+LYY ++ Sbjct: 607 NL------FIPADVDKWDLMMLHFQAWEKGIKSLYYLRSKS 641 >UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hydrogenothermaceae RepID=C1DWR9_SULAA Length = 1222 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 133/570 (23%), Positives = 232/570 (40%), Gaps = 91/570 (15%) Query: 224 SCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYK 283 +C + DSL+SI + G+G + RIRA GS I A +G IPF K Sbjct: 644 NCYVNVIDDSLESIMDKAKETAFLAKYAGGVGTDVTRIRATGSKIHSLNAKSSGIIPFIK 703 Query: 284 HFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLM 343 F T V + QGG R + ++ WHL+VE+ L L+ G R ++ + + + Sbjct: 704 IFDTIVNAIQQGGRRRSSQVMYLQPWHLDVEAFLDLRETTGNPYFRTPSLNTALWMPDEL 763 Query: 344 YTRLLKGEDITLFSPSDVPGLYDAFFAD-QEEFERLYTKYEKDDSIRKQRVKAVELFSLM 402 R+ +GE I LF P++ P L A+ + ++E+E K EK + +++ + + + Sbjct: 764 MRRIKEGEPIYLFDPAECPKLVTAWGEEFKKEYESCIEKAEKGELKLWKKIDSRDFYKKY 823 Query: 403 MQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALC 462 + + A TG ++ D N +P P + + SNLC EI++P P A+C Sbjct: 824 LFKLAKTGHPWLTFKDRHNEKNPC-PQYSVINSSNLCTEISIPNSP--------ESTAVC 874 Query: 463 TLSAFNLGAI-------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGI 515 TL++ NL + D+L++ V ALD +LD YP +++ M R +GI Sbjct: 875 TLASVNLARHVKEDKSDFDWDKLKDTLETMVVALDNILDKNFYPSEESRKNTMDLRPIGI 934 Query: 516 GVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAK 575 GV+ F L K G Y A K + ++ S ELAKE+GA P + E Y Sbjct: 935 GVMGFHEALIKLGIPYDSDKAVETARKIAKFMREVTYAKSEELAKERGAFPHYYEANY-- 992 Query: 576 GILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGI 635 N P RN+ L A+ P+ + S I+ ++ I Sbjct: 993 ----------------NYPPR---------------RNAVLLAVAPTASISIIAGTSSSI 1021 Query: 636 EPPRGYVSIKASKDGILRQVV-PDYEHLHD------------------------------ 664 + + + + G + P + L + Sbjct: 1022 DNYFSNIFSRDTLSGKFIVINKPLMKELEEKGLWSEELAEKIKAHQGSIQYIEELDGKID 1081 Query: 665 --AYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAY 722 Y+ +E+ + + Q++IDQ++S + + ++ + A+ Sbjct: 1082 KSLYKTAYEVSPYRQ-IDIAAAFQEYIDQAVSKSLYIEEDL-------RDKMEDIYMYAW 1133 Query: 723 KFGVKTLYYQNTRDGAEDAQDDLVPSIQDD 752 + G+K+ YY + + L + + + Sbjct: 1134 EKGLKSTYYCFIDKTVKGEKYTLNVNKRGE 1163 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 51/227 (22%), Positives = 100/227 (44%), Gaps = 18/227 (7%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVS----ISQVELRSHIQFYDGIKTSDIH 59 +V KRDGS E+ + K+ + EGL + +V ++ + + T ++ Sbjct: 2 QRIVVKRDGSVEKFQMKKLVDAIFALLEGLELPDDYEIVFKVAKELDLKIPEKVTTEELD 61 Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHL 119 ++KA LI ++ Y LA R + + ++ +F + D++ VE L Sbjct: 62 YLVLKAIEHLIPKNYI-YDTLATRQLLKIINRRIDRRFN--SFKDYINYAVEEKLLKPEL 118 Query: 120 LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 L+ + +++ ID+ RD Y + L+ +YL+++R E E Q+ ++ VA Sbjct: 119 LQ----FDIDRLEKSIDYSRDYNLDYFGLSTLKDRYLMKDR-DFETIEKPQWFFMRVAMG 173 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCV 226 + + + + Y+ +S + TP + T T Q+SSC Sbjct: 174 IGNTEDE------IIKIYNKLSNLEYLHSTPTLFNSGTLTNQYSSCF 214 >UniRef50_Q3SMN2 Ribonucleoside-diphosphate reductase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMN2_THIDA Length = 600 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 129/608 (21%), Positives = 218/608 (35%), Gaps = 83/608 (13%) Query: 173 YILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR-QFSSCVLI-EC 230 + VA + + R + RFY + F+ I++G + R +C ++ E Sbjct: 32 WQRVAQAVAQAEV-DARALWADRFYALLDDFRFLPGGRILAGAGSGHRVTLFNCFVMGEI 90 Query: 231 GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVK 290 D ++ I + G+G + +R G+ + +G + F + Sbjct: 91 ADDIEDIFEALKEGALTMQHGGGVGYDFSTLRPAGTIAQATGTIASGPVSFMHIWDAMCA 150 Query: 291 SCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKG 350 + G R GA H ++E+ + K + V +RH + VQ++ + Sbjct: 151 TVLSTGARRGAMMATLRCDHPDIEAFVDAKRDPAV----LRHFNLSVQVSDAFIAAVDAD 206 Query: 351 EDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK-QRVKAVELFSLMMQERAST 409 D L P L D AD R +T R + V+A L+ +++ T Sbjct: 207 ADWPLVFP-----LRDGEPADGAVVRRHWTGSTTAVPCRVLRTVRARALWQRILRAAYDT 261 Query: 410 GRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL 469 + VD N + + +N C EI LP C L + NL Sbjct: 262 AEPGVLFVDTINRDNTL-AGRETLTTTNPCGEIPLPA------------YGACDLGSLNL 308 Query: 470 GAIN----------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVIN 519 A +L L + A LAVR LD ++D YP+ A R A +R +G+G+ Sbjct: 309 TAFVVAPFAADARLDLAALGDAAALAVRFLDDVIDVSRYPLQAQAREARFKRRIGLGITG 368 Query: 520 FAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILP 579 A L G Y A L + ++ +AS +LA+E+G P + + Sbjct: 369 LADALVLLGLDYDSEPARQLAERAMRTVRDAAYRASIDLAREKGGFPALERSAFLASGFA 428 Query: 580 IDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPP 638 +R+ I G+RNS L A+ P+ T S ++N ++GIEP Sbjct: 429 GRLPP----------------EIRDGIARDGIRNSHLLAIAPAGTISLLANNLSSGIEPI 472 Query: 639 RGYVSIKASK--DGILRQVVPDYEHLHDAYELLWEMPG---------------NDGYLQL 681 + + DG R + D LLW G +L + Sbjct: 473 FAAEASRRILQPDGSYRS-----HAVSDYACLLWRAHGGVGQPPALVEAQQLDPVAHLAM 527 Query: 682 VGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAE 739 +Q +D +IS N + + A+ G+K T++ N GA Sbjct: 528 QAALQPAVDNAISKTINVA------ADIAFARFEALYRQAHALGLKGCTVFRPNPVTGAI 581 Query: 740 DAQDDLVP 747 A+ + Sbjct: 582 LAEPESER 589 >UniRef50_P09853 Ribonucleoside-diphosphate reductase large subunit n=10 Tax=Alphaherpesvirinae RepID=RIR1_HHV23 Length = 1144 Score = 437 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 147/672 (21%), Positives = 242/672 (36%), Gaps = 94/672 (13%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETR----------LQYVKRF 196 + + E YL R G ES +Y +A L R R + K F Sbjct: 503 SALKYEEFYL--KRFGGHYMESVFQMYTRIAGFLACRATRGMRHIALGRQGSWWEMFKFF 560 Query: 197 YDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG--DSLDSINATSSAIVKYVSQRAGI 254 + + +I TP M + T SSC L+ + ++ A + + +++ GI Sbjct: 561 FHRLYDHQIVPSTPAMLNLGTRNYYTSSCYLVNPQATTNQATLRAITGNVSAILARNGGI 620 Query: 255 GINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVE 314 G+ + +P K + V + ++ R A ++ WH +V Sbjct: 621 GLCMQAFNDA------SPGTAS-IMPALKVLDSLVAAHNKQSTRPTGACVYLEPWHSDVR 673 Query: 315 SLLVLKNN-RGVEGNRVRHMDYGVQINKLMYTRL------LKGEDITLFSPSDVPGLYDA 367 ++L +K G E R ++ + + L + RL K +LF L D Sbjct: 674 AVLRMKGVLAGEEAQRCDNIFSALWMPDLFFKRLIRHLDGEKNVTWSLFDRDTSMSLADF 733 Query: 368 FFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD 427 EEFE+LY E + + +L +++ A+TG +I D N H +D Sbjct: 734 H---GEEFEKLYEHLEAMGF--GETIPIQDLAYAIVRSAATTGSPFIMFKDAVNRHYIYD 788 Query: 428 PAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEELA 482 A + SNLC EI P+ + +C L + NL + L + Sbjct: 789 TQGAAIAGSNLCTEIVHPSSKRSS--------GVCNLGSVNLARCVSRRTFDFGMLRDAV 840 Query: 483 ILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHK 542 V ++ ++D P P RG R++GIG+ K G +L Sbjct: 841 QACVLMVNIMIDSTLQPTPQCARGHDNLRSMGIGMQGLHTACLKMGLDLESAEFRDLNTH 900 Query: 543 TFEAIQYYLLKASNELAKEQGACPW--FNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 E + +K SN L +GA P+ F + Y G + + E WE Sbjct: 901 IAEVMLLAAMKTSNALCV-RGARPFSHFKRSMYRAGRFHWERFSNASPRYEGE-----WE 954 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVP--- 657 LR+S+ HGLRNS ALMP+ S+QIS+ + G P + K ++DG + Sbjct: 955 MLRQSMMKHGLRNSQFIALMPTAASAQISDVSEGFAPLFTNLFSKVTRDGETLRPNTLLL 1014 Query: 658 ---------------------------------DYEHLHDAYELLWEMPGNDGYLQLVGI 684 D H ++ ++ + + L Sbjct: 1015 KELERTFGGKRLLDAMDGLEAKQWSVAQALPCLDPAHPLRRFKTAFDY-DQELLIDLCAD 1073 Query: 685 MQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQD 743 ++D S S + G +P L++ L+ AYK G+KT +YY R Sbjct: 1074 RAPYVDHSQSMTLYV--TEKADGTLPASTLVRLLVHAYKRGLKTGMYYCKVRKATNSGVF 1131 Query: 744 DLVPSIQDDGCE 755 +I C Sbjct: 1132 AGDDNIVCTSCA 1143 >UniRef50_C4NT50 Putative ribonucleoside-diphosphate redutase n=2 Tax=unclassified N4-like viruses RepID=C4NT50_9CAUD Length = 776 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 132/645 (20%), Positives = 227/645 (35%), Gaps = 104/645 (16%) Query: 149 KQLEGKYLVQNRVTGEIY-ESAQFLYILVAACL----FSNYPRETRLQYVKRFYDAVSTF 203 + KY + G I ++ + +A + R RFY+A+ F Sbjct: 13 QIWNQKYRFKTERDGFISDQNVVDTWGRIAQACSNLPHFHNNHAEREALEARFYNALYDF 72 Query: 204 KISLPTPIMSGVRTPTR-QFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRI 261 K I SG T +C ++ DSLD I + Q GIG + + Sbjct: 73 KFLPAGRINSGAGTGRNVTLFNCYVMGTIPDSLDGIFDMLKEAALTMQQGGGIGYDFSTL 132 Query: 262 RALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKN 321 R G+ ++G E+F +G + F + + K+ G R GA H ++ + K Sbjct: 133 RPKGALVKGVESFSSGPLTFMDVWDSMCKTIMSAGSRRGAMMATMRCDHPDIMEFVTAKQ 192 Query: 322 NRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTK 381 + R+R+ + V + D L Sbjct: 193 ----DPLRLRNFNVSVLCTDEFMEAVAADSDWDLMF------------------------ 224 Query: 382 YEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLE 441 D Q +KA EL+ ++ + + +D N + + + +N C E Sbjct: 225 ----DGKVYQTIKAKELWETILWNTYNYAEPGVIFIDRINKENNL-WFLETIAATNPCGE 279 Query: 442 IALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----------NLDELEELAILAVRALD 490 LP C L + NL ++ LEE VR LD Sbjct: 280 QPLPP------------YGACLLGSVNLAKHVVFPFVKGQAEIDMKALEESVRTGVRILD 327 Query: 491 ALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYY 550 ++++ +P+ A + A +R G+GV A L G RY + A N T I + Sbjct: 328 SVVETSLFPLEAQRDEARFKRRQGLGVTGLADALFMTGHRYGNQQAVNFTDTIMMNIAIW 387 Query: 551 LLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHG 610 + S ++AKE G P ++P++ +K + + + + E +++ I G Sbjct: 388 AYEESIQMAKEMGPAPC---------LVPLEAREKFIQSGFMQRMP---EYIKDDILEWG 435 Query: 611 LRNSTLSALMPSETSSQISN-ATNGIEPPRGYVSIKA--SKDGILR-QVVPDYEHLH--- 663 +RNS L ++ P+ T S + ++G EP + + DG R + V DY L Sbjct: 436 IRNSHLLSVAPTGTISMYAGNVSSGGEPIFAPKYQRKVTNDDGTKRTETVYDYAVLKFEE 495 Query: 664 -----DAYELLW-----EMPGND----GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKV 709 D E +W D ++ + ++QK++D SIS N + Sbjct: 496 HFGENDNPEAIWWWENYMATAQDLTPSDHIVMQAVLQKWVDSSISKTVNLP------EDI 549 Query: 710 PMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDD 752 AY G K T Y N G+ + + + Sbjct: 550 SFDDFKAVYDHAYTTGCKGCTTYRPNDVTGSVLSVETKEEKPVET 594 >UniRef50_A7HK53 Ribonucleoside-diphosphate reductase n=11 Tax=Thermotogaceae RepID=A7HK53_FERNB Length = 841 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 125/699 (17%), Positives = 233/699 (33%), Gaps = 142/699 (20%) Query: 128 FKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY--- 184 + + + I+H +D+ S A K L +Y ++ + +S + VA + + Sbjct: 2 YSTLTSVIEHWKDVELSKNAYKILSERYFLKTPSGEFLEKSWDDICRRVARVIATAELVN 61 Query: 185 PRETRLQ-----------YVKRFYDAVSTFKISLPTPIMSGVR----------------- 216 E + + + F+D + + +P + Sbjct: 62 NPELKEKSPFEQLDEVKFWESTFFDFLKSRIFIPNSPTLFNAGMGVRHELLWKSIDDMTL 121 Query: 217 ----------TPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGS 266 S+C ++ DS++ I GIG N R+R GS Sbjct: 122 EDYWEIYNSRNHLHMLSACFVVPVEDSIEGIFEAVKEYALITKAGGGIGSNFSRLRPKGS 181 Query: 267 PIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVE 326 + G +G + F F +AV QG R GA + H ++E + K E Sbjct: 182 FVAGTHGQASGPVSFMHVFNSAVGVVEQGYRRRGALMGILNIDHPDIEEFITAKEGNDGE 241 Query: 327 GNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDD 386 ++ + V I R L + D E E + K Sbjct: 242 KV-LKFFNISVGIT---MDR---------------QELLKLYMEDG-EIELKHPKCNG-- 279 Query: 387 SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPT 446 +RVK EL + + + TG + + N + P + + +N C EI L Sbjct: 280 ---SKRVKVRELINKIAKNAWKTGDPGLAFLSEMNKYYAMYPEM-TIESTNPCGEIGLAP 335 Query: 447 KPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALDALLDYQDYPIP 501 C L + ++ + + LAVR LD ++D +P+ Sbjct: 336 YE------------ACNLGSIDVAKFYMNGEFYWEAFAQATRLAVRFLDDVIDVNVFPLE 383 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 ++ R +G+G++ FA L Y+ + + SN+LA+ Sbjct: 384 KIRKAVTDSRRIGLGIMGFADLLYMMDIPYNSHEGRQFAADMTAYMAIHGHDESNKLAQL 443 Query: 562 QGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK--THGLRNSTLSAL 619 +G+ P F ++ Y Y++D + L+E K G RN + + Sbjct: 444 KGSFPLFEKSRY---------YREDEFAPFAMGMSKYDNELKEVFKESKKGKRNVAVLTI 494 Query: 620 MPSETSSQISNATNGIEPPRGYVSIKASKD------------------------------ 649 P+ + S I++ ++G+EP ++ Sbjct: 495 APTGSISNIADTSSGLEPNFLLAYVRYMNKHDGTKEALFYVNKVLESKLNKEILERVKDK 554 Query: 650 ----GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 G L+ + E + + ++ D +L + Q+++D +IS N S Sbjct: 555 LVERGSLQDIPEIPEEIKRVFVTAMDISPMD-HLLMQDAFQRYVDNNISKTINMPNS--- 610 Query: 706 SGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQ 742 + +L L A K ++ T+Y RDG+ Q Sbjct: 611 ---ATEEDVLNIYLEAMKLNIRGLTIY----RDGSLQTQ 642 >UniRef50_Q120H3 Ribonucleotide reductase large subunit n=1 Tax=Polaromonas sp. JS666 RepID=Q120H3_POLSJ Length = 784 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 130/667 (19%), Positives = 229/667 (34%), Gaps = 115/667 (17%) Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPT 209 L KY + + VA L + ++ R + Sbjct: 21 VLLEKYAAPGESSVREIQE------RVATSLADDKAQQARFVSAQ-------AGGFVPGG 67 Query: 210 PIMSGVRTPT-RQFSSCVLIECGDSLDS--------INATSSAIVKYVSQRAGIGINAGR 260 I S +C + GDS+ I + + + G+G + Sbjct: 68 RINSAAGMDRVSTMINCFVQPVGDSMSGSNQDGQPGIMDALRESAETMRRGGGVGYDFSS 127 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 IR +G+ ++G ++ +G + + + F ++ G R GA + H ++E + K Sbjct: 128 IRPVGARVKGTDSKASGPVSYMRVFDRMCQTVESAGARRGAQMGVMRVDHPDIEMFIDAK 187 Query: 321 N-----NRGVEGNRVR------------------------HMDYGVQINKLMYTRLLKGE 351 G++ + + V + ++ Sbjct: 188 KTPDFSQMGLDKKDADGLLDLVRKNQGFGWSLRSAFATLSNFNISVAVTDEFMNAVVNDS 247 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIR--KQRVKAVELFSLMMQER--- 406 D L D E E TK D R + VKA+E+++ +M+ Sbjct: 248 DFDLVH-------------DAEPVEACPTKVCTDGKARFVYRTVKAIEIWTKIMRNTYYG 294 Query: 407 ASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSA 466 A G ++I ++ N + ++ +N C E LP + N + Sbjct: 295 AEPGVLFIDRINQDNNLRYCE----VIKATNPCGEQTLPPYGCCCLGSPNLTRFVSN--P 348 Query: 467 FNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAK 526 F L A + D L ++ AV LD +LD +P+P A +R +G+G A +A Sbjct: 349 FTLMASFDFDGLSKVVAKAVEMLDKVLDKTHWPLPQQASEAANKRRIGLGHFGLADAMAM 408 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKD 586 G RY + E ++ AS LAK GA P+F+ Y L T+ Sbjct: 409 LGIRYDSQQGADFAAHVSEVLRDSAYMASVNLAKTLGAFPFFDAEKY----LEEGTFASR 464 Query: 587 LDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISN--ATNGIEPPRGY--V 642 L E ++++I+ +G+RNS L ++ P+ T S A++GIEP Sbjct: 465 LP-----------EKIKDAIRMYGIRNSHLLSIAPTGTISMAFGDNASSGIEPIFSLRQQ 513 Query: 643 SIKASKDGILRQVVPDYEHLH------------DAYELLWEMPGNDGYLQLVGIMQKFID 690 K DG + + D + +M D +L+++G + +ID Sbjct: 514 RNKMMADGSRQIFELEDYAYRQFKLSKGEDAKSDVFVTAMQMTVAD-HLRVLGAVAPYID 572 Query: 691 QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPS 748 +IS N P + + + A++ G+K T Y N GA D Sbjct: 573 SAISKTVNVP------ADYPFEDFQQVYMDAWRMGLKGITTYRPNDMIGAVLVSADDADK 626 Query: 749 IQDDGCE 755 E Sbjct: 627 KAAVATE 633 >UniRef50_C4RH87 Ribonucleoside-diphosphate reductase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RH87_9ACTO Length = 611 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 135/650 (20%), Positives = 220/650 (33%), Gaps = 135/650 (20%) Query: 157 VQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQ-----YVKRFYDAVSTFKISLPTPI 211 V ES L VA L + + + RF ++ + I Sbjct: 22 VTGPDGAVRIESVDDLLDRVATGLGAVEREYGADESTARVWAARFRALMAENRFWPSGRI 81 Query: 212 MSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGG 271 ++ T Q +SC ++ D L +I T G G + +R G+PI Sbjct: 82 LNNCGTRQGQLASCFVLPVEDDLGAIFDTLKLAASCHRTGGGTGFDLTPLRERGAPISTA 141 Query: 272 EAF-HTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRV 330 EA +G + + F QGG GA + H +V + K G R+ Sbjct: 142 EAAGSSGPVSWLHLFDAETGVVMQGGKMRGANLASLSVRHPDVFEFIDAKAVVG----RL 197 Query: 331 RHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK 390 + + V ++ L+ G +I L SP + Sbjct: 198 ANFNLSVTVDDAFMRTLIDGGEIDLVSP--------------------------VGGRPR 231 Query: 391 QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN 450 +RV A E++ + + TG + D N +P + P+R +N C E L + Sbjct: 232 RRVPAAEIWRRISAQAWRTGDPGLLFTDMINRANPLLDRLGPIRTTNPCGEQTLYPYEPS 291 Query: 451 DVNDENGEIALCTLSAFNLGAIN------NLDELEELAILAVRALDALLDYQDYPIPAAK 504 TL + NL A+ + LE AVR LD +D YP P Sbjct: 292 ------------TLGSVNLRAMTGPDGRLDTARLERTVEDAVRLLDNSIDASHYPDPRIT 339 Query: 505 RGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA 564 A G R LG+GV+ FA L G RY A + + I+ + LA E+G Sbjct: 340 AMARGNRRLGLGVMGFADLLIALGVRYDSTRALAVVDEVGGRIRAVAEATTRRLAAERGT 399 Query: 565 CPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET 624 P F+ P +D +RN ++ + P+ T Sbjct: 400 FPNFD------------------------PARFD----------APVRNCAVTTIAPTGT 425 Query: 625 SSQISNATNGIEPPRGYVSIKASK-DGILRQVV--------------------------- 656 S ++ ++GIEP + K DG + V Sbjct: 426 ISMVAGCSSGIEPRFAPIWRKNVLVDGGVSYVDEDLAADVCAHGGVDPEQARRLIRERPV 485 Query: 657 ---PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQ 713 P E + D Y ++PG + ++++ Q+ ID ++S N + Sbjct: 486 TELPMPEPVRDRYRYAHDVPG-EWHVRIAAQWQRHIDNAVSKTVNLPR------DCSVDD 538 Query: 714 LLKDLLTAYKFGVK--TLYYQNTRD-------GAEDAQDDLVPSIQDDGC 754 + + L +++ G K ++Y Q +R+ GA D P D G Sbjct: 539 VAEVLTASWRLGCKGVSVYRQGSREQDLQEVAGARTGTDRPTPLAGDAGT 588 >UniRef50_Q21U31 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21U31_RHOFD Length = 589 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 128/607 (21%), Positives = 231/607 (38%), Gaps = 75/607 (12%) Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPT 209 +YL + + + VA + P + +RF +S ++ Sbjct: 14 VWRTRYLW-AEPGSVPEPAIENTWARVALAVSGAEPHHQN-DWRERFLAMLSDWRFLPGG 71 Query: 210 PIMSGVRTPTR-QFSSC-VLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSP 267 I++G T R +C + DS+ I ++ + IGI+ +R + Sbjct: 72 RILAGAGTSRRVTLFNCLAMGPIEDSVQGIFNALREAMQCLQAGGAIGIDFSTLRPALAL 131 Query: 268 IRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEG 327 + A +G + F +Q A G R A H ++E+ + K + G Sbjct: 132 AQSSGAVASGPVSFMNVWQAANAVLEAGNRRRSAMLATLRCDHPDIEAFIDAKLDTGA-- 189 Query: 328 NRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDD- 386 + H V +N L + L P + E ER+++ Sbjct: 190 --LSHFKLSVLLNDEFMQALQEDGPWPLVFPLGEHPI----PVGGEVCERVWSDGGPPQL 243 Query: 387 SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPT 446 + +RV A L+ ++Q + ++G + +D N + NL + L T Sbjct: 244 CMVHRRVPARALWEKLLQAQHASGEPGVLFIDRINRAN------------NLWYDEHL-T 290 Query: 447 KPLNDVNDENGEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDALLDYQ 496 D C L + NL +L L +A +A R LD + D Sbjct: 291 VANPDGGVPLPPWGACNLGSINLSRFVQQPFAAHPSVDLGGLRAVAAVATRFLDDVYDIS 350 Query: 497 DYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASN 556 +P+ A ++ A+ R +G+GV A LA G RY ++ +LT + AI+ + S Sbjct: 351 LFPLKAQQKSALASRRIGLGVTGLADMLAMLGLRYGSAASIDLTREIMGAIRDTAYRTSV 410 Query: 557 ELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTL 616 ELA+E+GA P ++ Y ++ + AL+++I HG+RNS L Sbjct: 411 ELAQEKGAFPACDKLKYGASPFVLELDR----------------ALQDAIAQHGIRNSHL 454 Query: 617 SALMPSETSSQIS-NATNGIEPPRGYVSIKASKDGILRQVVPDYEH-------------- 661 A+ P+E+ S ++ N +NGIEP R + +++ + + V D E Sbjct: 455 LAVAPTESISLLANNVSNGIEPMRAFQAMRRVRGAEGQAVFFDVEDAACRQYQALHGPDA 514 Query: 662 -LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 + ++ D LQL+ +Q +D ++S S +Q + L Sbjct: 515 PWPKHFVQAADVSAEDQ-LQLMAAVQSHVDNALSKTVYLPAS------ASVQDVGLVLQQ 567 Query: 721 AYKFGVK 727 A++ G+K Sbjct: 568 AWELGLK 574 >UniRef50_B9KZV2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZV2_THERP Length = 589 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 117/638 (18%), Positives = 214/638 (33%), Gaps = 127/638 (19%) Query: 162 TGEIYESAQFLYILVAACLFSNYPRETR----LQYVKRFYDAVSTFKISLPTPIMSGVRT 217 G I E+ + L+ VA + + R + ++FY+ ++T + TP + T Sbjct: 23 EGRIIETEEELFWRVARAVAAAEDAFPRGPRSAEIAEKFYELMTTLRFLPNTPALINAGT 82 Query: 218 PTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTG 277 Q +C +I DSLD I K G G + +R G +R +G Sbjct: 83 QLGQLFACFVIPVPDSLDGIFGAVRDAAKIQQTGGGTGFSFSHLRPRGDLVRSTRRPSSG 142 Query: 278 CIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGV 337 + F + F A + VRGGA H +V + K N + ++ V Sbjct: 143 AVSFIRIFDVASDVIATESVRGGANMAVLRCDHPDVREFIDAKRNPALFSR----FNFSV 198 Query: 338 QINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVE 397 + ++ +I L +P + + A E Sbjct: 199 LVTDDFLRAAIERREIALINPRT--------------------------GLPFAQANAGE 232 Query: 398 LFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENG 457 LF M+ G + D + PA+ P+ +N C E+ L Sbjct: 233 LFDAMVDAAWEVGDPGLLFYDRIQRDNAV-PALGPLEATNPCGEVPLHPWE--------- 282 Query: 458 EIALCTLSAFNLGAIN---------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAM 508 C L + NL A + L+E A LA+R LD +++ YP + Sbjct: 283 ---ACVLGSLNLRAFIVERGDRAFLDEAGLQESARLALRFLDNMVEVSRYPKVEIETICR 339 Query: 509 GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWF 568 R +G+G++ FA L Y + + + +Q ++AS LA+E+G P F Sbjct: 340 ANRKVGLGIMGFADLLLALRIPYGSDESVAVADRVMGLVQAAAVEASRRLAEERGPFPNF 399 Query: 569 NETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 + YA P RN+T++ + P+ + S I Sbjct: 400 PISRYAARGEPP------------------------------RRNATVTTVAPTGSISII 429 Query: 629 SNATNGIEPPRGYVS-------------------------------IKASKDGILRQVVP 657 + ++GIEP + G + Sbjct: 430 AGCSSGIEPLYALAYRHVGEFVGIVEPHPLLLRELSRIGKYDPALLHEIEVTGRIGHRTD 489 Query: 658 DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKD 717 E L + + E+ + ++++ +Q+ ++ ++S N + + + Sbjct: 490 LPEELRRLFRVATEI-SPEEHIRVQAAVQRHVENAVSKTINLPY------EATRDDVRRA 542 Query: 718 LLTAYKFGVK--TLYYQNT-RDGAEDAQDDLVPSIQDD 752 L A++ G K T+Y + R + + +D Sbjct: 543 FLLAHELGCKGVTVYREGAPRGQVLQVLGHCLSCVGED 580 >UniRef50_Q6UDJ2 Ribonucleoside-diphosphate reductase n=2 Tax=Iltovirus RepID=Q6UDJ2_9ALPH Length = 811 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 146/687 (21%), Positives = 251/687 (36%), Gaps = 104/687 (15%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKR----------- 195 + ++ E YL ++ ES ++ +AA Sbjct: 156 SARKFESMYL--GKLKNGRLESVGQFFLRIAAEAARGVANNDAFAAAVFRDGTRAPDANT 213 Query: 196 ----FYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGD--SLDSINATSSAIVKYVS 249 F+ A+ +I PTP+M T +R ++SC L++ + D + + + I+ + Sbjct: 214 VFCLFFMALCRQEIVPPTPVMLFAGTESRSYASCFLLDVRGRHTRDVLTSIAEEIIPVMH 273 Query: 250 QRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMW 309 GIG+ + +G + K + + + + R ++ W Sbjct: 274 SHGGIGLYM-------DCDSNWDDNSSGMMLALKALDSIIAASNAVSARPSGLCVYVEPW 326 Query: 310 HLEVESLLVLKNN-RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF 368 H ++ +L + G E R + + + + L R TLF L D + Sbjct: 327 HRDIMKILRCRGVLAGNEETRCDNTFFALWMPDLFMKRFEANGTWTLFDGR-AAHLSDLY 385 Query: 369 FADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 EEFE+ Y E+ ++ A ++ +++ STG ++ N + FD Sbjct: 386 ---GEEFEKEYELLER-KNVGIATYPARDVMFALIKSAVSTGTPFVMFKHAVNRNYFFDM 441 Query: 429 AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------------N 473 A ++ SNLC EI T ++ + +C L++ NL A Sbjct: 442 AGRAMKCSNLCTEIVHMT--------DDESVGVCNLTSLNLAAFVTRRNALPGTPPIGTF 493 Query: 474 NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSD 533 + + +A ++AL+ + PI A G R++GIGV F G Sbjct: 494 DYSSFRDACAVATVFINALMSLSNLPIKRATTGNERLRSIGIGVQGFHTACLLQGFGLDS 553 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQG--ACPWFNETTYAKGILPIDTYKKDLDTIA 591 A K FEA+ + S + E G F+E+ YAKG L +D + A Sbjct: 554 VEACRFNGKLFEALALTTFQTSCRIC-ELGMNPFRGFSESKYAKGWLHMDGW------PA 606 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI 651 W+ LRE+IK +GL N L ALMP+ +SSQ++ + GI P G + K + G Sbjct: 607 RHLYFDGWDRLRENIKAYGLYNCQLVALMPTASSSQLTEVSEGIHPVFGNIFSKITTTGE 666 Query: 652 LRQ-----------VVPDYEHLHDAYELLWE--------------------------MPG 674 Q + P+ D E L + Sbjct: 667 DIQLNVALMETIECLYPNKAERRDILERLHKNKWSTRGAFGAALPSQHPLTKFDTAFEAD 726 Query: 675 NDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQN 733 + L+L F+D S S G V ++ L TA+K+G+KT +YY Sbjct: 727 QEHLLRLSADRAPFVDHSQSTTLYVVEED--DGAVRASRVAHLLTTAFKYGLKTGMYYCK 784 Query: 734 TRDGAEDAQDDLVPSIQDDGCESGACK 760 R ++ + + D AC+ Sbjct: 785 VRKATDNGVFLGTDTCRRDDPTCLACQ 811 >UniRef50_B7KJK7 Ribonucleoside-diphosphate reductase n=4 Tax=Cyanobacteria RepID=B7KJK7_CYAP7 Length = 1123 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 133/486 (27%), Positives = 227/486 (46%), Gaps = 26/486 (5%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHET 61 + V KRDGS +N+ KI V++WA G +V+ +E + +GI T +I + Sbjct: 34 TSKIQVVKRDGSKAALNIAKIREVVEWACVG-KDVNPIALEAGLTTRLRNGITTREIQDN 92 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQ--FEPPALYDHVVKMVEMGKYDNHL 119 +I A ++ S + PD++Y+A RL I+ L K ++ V ++ +YD + Sbjct: 93 LINCALEMCSPEEPDWRYVAGRLHIWSLWKDTLANRGYQYGNYDQTVKTKIDHNQYDRRI 152 Query: 120 LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 L Y+ EE ++ T+I+ D D + YA L +YL+ + E Q + A Sbjct: 153 LV-YSSEELQEAGTWINSDWDTDYDYAGAVLLTSRYLLPD-------ELPQEALLTCALL 204 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINA 239 L S E RL++ ++FY+A++ +ISL TPI++ +R P +SC + D+L+SI + Sbjct: 205 LASVETPENRLKWARKFYEAIAKRQISLATPILANLRVPNGSLTSCFISAIDDNLESIFS 264 Query: 240 TSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRG 299 + K G+GIN RIRA GS + G IP+ K + +QGG R Sbjct: 265 EVTNTAKISKNGGGVGINVSRIRATGSWVMNKPNASGGVIPWIKILNDTAIAVNQGGRRA 324 Query: 300 GAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPS 359 GA T+ +WHL+V L ++ G + + + + + R++ ++ TL P Sbjct: 325 GAVTISLDIWHLDVPEFLEMQTENGDQRRKAYDIFPQLVMADEFMRRVIHKQEWTLVDPY 384 Query: 360 DVPGLYDAFFAD--QEEFERLYTKYEK----DDSIRKQRVKAVELFSLMMQERASTGRIY 413 ++ + A+ EEFE++Y+K E + +RV A ELF +M+ + TG Y Sbjct: 385 EIRTKFGVELAELWGEEFEQVYSKIETAIHNGEITLYKRVNARELFKHIMRSQLETGMPY 444 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLS--AFNLGA 471 + D N +P + + NLC + + G+I + L N+ Sbjct: 445 LAFKDTINRANP-NKHEGYIPGVNLC------VAGETKILTDRGQIPIADLVGEKVNIWN 497 Query: 472 INNLDE 477 + E Sbjct: 498 GSEWSE 503 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 83/331 (25%), Positives = 140/331 (42%), Gaps = 31/331 (9%) Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDY 495 + C E KP + + C L + NL ++N D LE+ +AVR LD +D Sbjct: 815 TGQCTESFSNVKPGLESHC-------CNLVSLNLANLDNSD-LEDTCKIAVRLLDNTIDL 866 Query: 496 QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKAS 555 P AAK RT+G+G + A +LAK Y FE I Y+ +S Sbjct: 867 THPPFEAAKNHNNLYRTIGVGCMGLADWLAKRRLSY---EHLTDISHLFEEIGYWCTLSS 923 Query: 556 NELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNST 615 EL++E+GA F + +++G L + A+ P W L E I+ +G+RNS Sbjct: 924 MELSQERGAYACFPGSDWSQGKLIGSKPVEWFIENAHHPER--WAKLAEDIQLYGIRNSH 981 Query: 616 LSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGN 675 ++A+ P+ +SS + T + P G + P + Y + Sbjct: 982 ITAIAPNTSSSLVQGCTASVLPVYSRFFYDKWAKGAVPIAPPFIKESFWFYPEN-KTYDQ 1040 Query: 676 DGYLQLVGIMQKFIDQSISANTNYDP------SRFPSGKVPMQQLLKDLLTAYKFGVKTL 729 + ++ + +MQ++ID IS ++ P + + + L+ A++ G K + Sbjct: 1041 NKVVKAIAVMQQWIDTGISMELLFNLNQGVYFPEDPERFLKAKDIYDTLILAWREGCKAV 1100 Query: 730 YYQNT--RDGAEDAQDDLVPSIQDDGCESGA 758 YY T +D +D+ D+ C S A Sbjct: 1101 YYIRTVQKDNFKDS---------DNSCSSCA 1122 >UniRef50_D2EFV5 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFV5_9EURY Length = 756 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 126/638 (19%), Positives = 231/638 (36%), Gaps = 112/638 (17%) Query: 149 KQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLP 208 + KY + + ++ ++ ++ L S + + FY + FK Sbjct: 20 RIFYEKYSLSDLEGNRTEKTPIEMWKRISRELASVEKDDKKKDIENNFYRLLEDFKFVPG 79 Query: 209 TPIMSGVRTPT-RQFSSCVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGS 266 I+ G +C + DSL++I+ T+ + + S G+GI+ +R S Sbjct: 80 GRILFGAGANHKATLLNCHHLPITKDSLEAIHDTAKEMARTYSYGGGVGIDISIVRPERS 139 Query: 267 PIRGGEAFHTGC---------IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 +G + F K + Q G R GA + + H ++ES + Sbjct: 140 --------SSGIMQQDFRLASVSFMKLYSITTGIIGQTG-RRGAWMITLDVTHPDIESFV 190 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFER 377 +K + VR+ + V++ + + TL F ++ EF Sbjct: 191 TIKK----DKKSVRYANISVKVYDDFMDAVENDKIFTL-----------HFKNEKVEF-- 233 Query: 378 LYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD-PAIAPVRQS 436 K+ +KA++L+ + +TG I D + SP + ++ + Sbjct: 234 ------------KKEIKALDLWKKRIDTAVNTGDPGIMFWDRMKSESPTEYDEKMAIKGT 281 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN----------NLDELEELAILAV 486 N C E L C L A NL + + L++ V Sbjct: 282 NPCSEQPL------------ENYGACDLGAINLDYFVKNQCTDKAEVDWENLDKTVRYGV 329 Query: 487 RALDALLDY--QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTF 544 R LD +LDY + + + R +G+G++ A L RY A Sbjct: 330 RFLDNVLDYSYNRHALKEQADETVYARRIGLGIMGLANMLISMNLRYDSDKAIEFVDSLM 389 Query: 545 EAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRE 604 + I+ S+ LA E+G+ P F + + + K LD + L + Sbjct: 390 KKIKETAYDESSNLAVEKGSFPAFVAEKHLQ-----RNFVKRLD-----------KKLLD 433 Query: 605 SIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK---DGILRQVVPDYEH 661 I +GLRN+ + + P+ + S ++ + GIEP + S+ +G + P + Sbjct: 434 KISKNGLRNACILTVAPTGSISSMAGVSGGIEPICALSYTRRSESLSEGKFEVLDPFVKR 493 Query: 662 LHDAY---------ELLWEMPGNDGY--LQLVGIMQKFIDQSISANTNYDPSRFPSGKVP 710 D + EL D + +++ +QK ID SIS+ N S Sbjct: 494 YMDKFKIRDKSTLPELFVTAHKIDPFFRVKMQATIQKHIDSSISSTVNL------SADTD 547 Query: 711 MQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLV 746 + + K A+K G K T+Y + ++D A D+ Sbjct: 548 AETVDKIYRYAWKLGCKSITVYREGSKDDILKATDEKP 585 >UniRef50_A7IY07 Ribonucleoside-diphosphate reductase n=3 Tax=Chlorovirus RepID=A7IY07_PBCVN Length = 1103 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 139/475 (29%), Positives = 218/475 (45%), Gaps = 40/475 (8%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAA---------------EGLHNVSISQVELRS 45 MN+ ++V KRDGS E I+ DKI + + GL +V +S++ Sbjct: 6 MNRLMVVLKRDGSKENISFDKILQRIQRLCWPINSKPVYKGSRAMTGL-SVDVSKIVASV 64 Query: 46 HIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDH 105 DGI T + E +A + + + PDY LAAR+++ +L+K+ + + Y Sbjct: 65 CASIVDGISTVQLDELTADKSASMTT-EHPDYGILAARISVSNLQKQTHDKITDA--YAE 121 Query: 106 VVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEI 165 + ++ +N E+ + +FID+DRD F Y K +E YL + V +I Sbjct: 122 IAHLLSNDFKEN------IEKHADEYQSFIDYDRDYDFDYFGFKTMERLYLTK--VNNKI 173 Query: 166 YESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSC 225 E Q +Y+ VA L+ + + VK YDA+S K + +P + Q +SC Sbjct: 174 VERPQHVYLRVAIGLWG-----SDIARVKETYDALSCRKFTHASPTLFNAGFKKAQLASC 228 Query: 226 VLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHF 285 L+ DSL I + G+GIN IR GS I G G +P K F Sbjct: 229 FLVTVEDSLGDIYKVLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPMLKVF 288 Query: 286 QTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYT 345 T +QGG R G+ ++ H +V L++K N+G E R R++ Y V +N L Sbjct: 289 DTTSAYANQGGRRKGSFAIYLEPHHSDVMDFLLMKRNQGEESLRARNLFYAVWLNDLFMK 348 Query: 346 RLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQE 405 R+ +LF PS+ PGL DAF +E+ LY +YE + K VKA ++++ M+ Sbjct: 349 RVETDAQWSLFDPSECPGLTDAF---GDEYAELYERYEAEGK-AKNVVKARDVWNTMVTT 404 Query: 406 RASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL---EIALPTKPLNDVNDENG 457 TG+ Y+ N D N + +R SNLC+ L + + + D G Sbjct: 405 IIETGQPYVSNKDAVNKKN-MQMNAGTIRGSNLCVAGDTKILTSSGYHPIKDMEG 458 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 77/361 (21%), Positives = 132/361 (36%), Gaps = 66/361 (18%) Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALD 490 + C EI T E A+C + + L + D+L + + + LD Sbjct: 770 TGQCNEIVEYTS--------KEETAVCVIGSVVLKNYVKNDKFDFDDLRKNVKILAKNLD 821 Query: 491 ALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYY 550 +D YPI A+ RR +G+GV K Y A +L + FE I Y Sbjct: 822 RSIDVMAYPIKEAETSNKLRRPIGVGVQGLQDVFFKLRFSYDSPEARDLNREIFEHIYYA 881 Query: 551 LLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHG 610 ++AS ELA+ G P F + +KGIL + + + DW L E +K G Sbjct: 882 AVEASVELAEIHGPYPTFEGSPASKGILQYHLWDVTPKS------NLDWRGLEERVKK-G 934 Query: 611 LRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEH--------- 661 +RNS ++ALMP+ +++QI + EP + + + G + Sbjct: 935 IRNSLVTALMPTASTAQICGSVEAFEPITSNLYSRRTLAGEFPVINSYLVRELIERGTWN 994 Query: 662 -----------------------LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTN 698 + Y+ W++ + + F+DQ+ S N Sbjct: 995 EQMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSM-KSVIDMASDRGAFVDQTQSMNLF 1053 Query: 699 YDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL-YYQNTRDGAEDAQDDLVPSIQDDGCESG 757 ++ + L +K G+KTL YY ++ + + D+ C Sbjct: 1054 LAQP-------TLKNVTSMLFYGWKSGLKTLQYYLRSKPASSAIAVTI-----DNDCLVC 1101 Query: 758 A 758 + Sbjct: 1102 S 1102 >UniRef50_Q6VMN2 Ribonucleoside-diphosphate reductase n=10 Tax=Tortoise herpesvirus RepID=Q6VMN2_9HERP Length = 796 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 165/740 (22%), Positives = 267/740 (36%), Gaps = 133/740 (17%) Query: 118 HLLEDYTEEEFKQMDTFIDHDRDM--TFSYAAVKQL--------EGKYLVQNRVTGEIYE 167 L +D EE M + + + +Y +K L E YL + +E Sbjct: 89 DLCDDVREEVTHHMARIVKYLTNFYSGLAYYKIKTLGLMSAMKYEDFYLTK--FQNGTHE 146 Query: 168 SAQFLYIL----VAACLFSNYP---------RETRLQYVKRFYDAVSTFKISLPTPIMSG 214 S + VA + + P + Y F++ +S I PTP M Sbjct: 147 SIGQFFTRIAATVATHIHRDMPQYGLLIPMMERSWFNYFDYFFNLLSHNIIIPPTPAMLF 206 Query: 215 VRTPTRQFSSCVLIECG--DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGE 272 + R +SC L++ +L++++A + I+ ++ R GIGIN E Sbjct: 207 MGRKNRSLASCYLLDPPQKTTLEAMSAVAQDIIPILNHRGGIGINVNDYNQTP-----RE 261 Query: 273 AFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGN-RVR 331 G + K T V + R +F W+ +VES L +K +E + R Sbjct: 262 GRKLGFLGLAKLIDTCVLLSNSDSERPTGVCMFMEPWNADVESFLGIKGLTTLEHHLRCD 321 Query: 332 HMDYGVQINKLMYTRLLKGED--ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIR 389 ++ + I L R + + +LF L + +EFE Y + E Sbjct: 322 NIFNALWIPDLFMKRYMADPNTTWSLFD-DRCNHLAKLY---GKEFEDEYHRLETAGMAV 377 Query: 390 KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPL 449 +Q + EL +++ TG +I D CN H D +R SNLC EI T+P Sbjct: 378 RQ-MPIKELLFKIIRSAIMTGSPFIMFKDSCNRHYYMDTQGQAIRGSNLCTEIIHHTEPD 436 Query: 450 NDVNDENGEIALCTLSAFNLGAI--------------------------------NNLDE 477 +D +C L NL A N ++ Sbjct: 437 SD--------GVCNLMNVNLPAFLTLSFNKETYCLSDDTLWQEHNKFCTPGGHRYFNFEK 488 Query: 478 LEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSAN 537 L E A ++ ++D +P + GA R++GIG G+ A Sbjct: 489 LTEAVTAATIFINVMIDRSVHPTTKTQNGAKNFRSMGIGFQGLNTLCWILGETLVTPKAR 548 Query: 538 NLTHKTFEAIQYYLLKASNELAK-EQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 L EA+ +ASNEL + F+E+ YA+GI+ D + D + + Sbjct: 549 KLGKTICEAMYLSAAEASNELCQLGLSPFKRFSESRYARGIMHFDAW----DNVGSLTFQ 604 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV 656 W ALR I +GL NS ALMP+ +SSQI+ ++ P + K S +G V Sbjct: 605 DRWSALRPKIIKYGLYNSQFIALMPTVSSSQITESSEAFYPVFTNLYSKLSVNGE--TVK 662 Query: 657 PDYEHLHDA--------------------------------------YELLWEMPGNDGY 678 P+ L D Y +E N Sbjct: 663 PNVMLLRDLGSVFKGKDYTDALEKLERHKWVVGEAFPDLPTDHAIRKYLTAFEYDQN-TL 721 Query: 679 LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDG 737 L+L F+D S S + + P + + ++ L+TAYK G+KT +YY + Sbjct: 722 LELTADRAPFVDHSQSNTLYFLEGKTP---ISAKYIMNHLVTAYKLGLKTGMYYCRIKKA 778 Query: 738 AEDAQDDLVPSIQDDGCESG 757 + + + C + Sbjct: 779 TDASIFMC---AGQEICSTC 795 >UniRef50_Q8V6N4 Ribonucleotide reductase n=2 Tax=Haloviruses RepID=Q8V6N4_9VIRU Length = 805 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 133/729 (18%), Positives = 223/729 (30%), Gaps = 168/729 (23%) Query: 142 TFSYAAVK-QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAV 200 + A+ L +Y ++ G I E A L+ VA + + F + Sbjct: 31 RLTDNALHGILPARYFRKD-SEGNIIEGADDLFRRVAENVAGAEEDGDFDTWADEFEHQM 89 Query: 201 STFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGR 260 T + +P + T Q S+C +IE D ++ I T+ G+G Sbjct: 90 KTLRFMPNSPTLMNAGTDMNQLSACFVIEPRDDMEDIFETAQQAALIFQSGGGVGYAFSH 149 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 +R G+ I +G + F + F QGG R GA H ++ +V K Sbjct: 150 LRPKGAFINSTGGEASGPVSFMRVFDETCNQVKQGGKRRGAQMGILRADHPDIGRFIVAK 209 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS-------PSDVPGLYDAFFA--- 370 N G + + V + E TL+ P V L F++ Sbjct: 210 RNEGEFA----NFNISVATTDNFIEAVDAQESYTLYDPETDYEEPYTVRELSAHFYSPEY 265 Query: 371 ---------------DQEEFERLY----------------TKYEKDDSIR-----KQRVK 394 +E R Y K+E + +R + Sbjct: 266 QDNPRDAFDDGEGAVVEENLWRDYADEIECELYGERVTLREKWEGHEGLRLEVGEPMELP 325 Query: 395 AVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP---VRQSNLCLEIALPTKPLND 451 A ++ +M+ G + N + N FD P + +N C E L Sbjct: 326 AAFIWDVMIDGAWRNGEPGLFNFEESNRQHSFDVEEYPEFRMNATNPCAEQMLV------ 379 Query: 452 VNDENGEIALCTLSAFNLGAI-------------------------------------NN 474 E C L NL + + Sbjct: 380 ------EYEACNLGHINLSLMLSEDAPTYDEFLSDKLEDVASGDLSTREAVEWYFETAVD 433 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 +EL+ R LD ++ D+PIP G R +G+G++ FA L + G Y Sbjct: 434 FNELDRTIEAGTRFLDNVVTQSDFPIPEITERVGGMRKIGLGIMGFAQMLYQMGVPYGTQ 493 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP 594 + + I AS+ LA E+GA +++++ YA + + Sbjct: 494 DSYEVARCVMRYIDRRGTWASHRLALERGAFSYWDKSKYADPTEYDEWFAARTGLDPE-- 551 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI--- 651 DW +RN ++ + P+ T+S I N T G EP + K + I Sbjct: 552 ---DWAG------GFPIRNHNITTIAPTGTTSMIGNTTGGCEPAYNVANFKNVSEDIQGD 602 Query: 652 -------------LRQVVPDYEHLHDAYELLW-----------EMPGN------------ 675 L + D + + + E L +P Sbjct: 603 DLLVEFDDYFLRTLEENDLDVDAVKEEAETLMRNNEFDGVNDLSIPDEIAEIFVTTQDLS 662 Query: 676 -DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFG-----VK-- 727 + + + Q+F D IS N + + A G +K Sbjct: 663 SEQHGLMQRAFQEFCDSGISKTVNLP------NEATHDDVADAYQLALDEGRRGAVIKGL 716 Query: 728 TLYYQNTRD 736 T+Y +RD Sbjct: 717 TVYRDGSRD 725 >UniRef50_A4IY36 Ribonucleoside-diphosphate reductase n=26 Tax=root RepID=A4IY36_FRATW Length = 590 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 138/681 (20%), Positives = 229/681 (33%), Gaps = 149/681 (21%) Query: 131 MDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRL 190 + ID RD S A + L Y +QN S Q+ + A + Sbjct: 7 LGINIDLSRDRELSEQAQQLLTNYYCLQNE------PSPQYAFARAAVAYSFG-----DM 55 Query: 191 QYVKRFYDAVSTFKISLPTPIMSGVRTP----TRQFSSCVLIECGDSLDSINATSSAIVK 246 +R Y A + +P++S P SC L DSL+ + SS + Sbjct: 56 NLAQRIYAAAAKGWFMFASPVLSNAPLPGVKVKSLPISCFLSYVPDSLEGLIEHSSELRW 115 Query: 247 YVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFY 306 + G+G + +RA+ G IPF + + QG R G+ + Sbjct: 116 LSVKGGGVGGHWSSVRAVSD-------KAPGPIPFMHTVDADMVAYRQGKTRKGSYAAYM 168 Query: 307 PMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYD 366 + H ++ L ++ G + ++ + V + + +D L P Sbjct: 169 DISHPDIIEFLGIRVPTGDVNRKCLNLHHAVNLTDDFMQAVANDQDWKLIDP-------- 220 Query: 367 AFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP- 425 DD + +KA +++ +++ R TG Y+ +D N P Sbjct: 221 ------------------DDKTVRDVIKARKIWETILETRYRTGEPYLNFIDTANRALPK 262 Query: 426 -FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAIL 484 ++ SNLC EI L T + A+C LS+ NL + + L Sbjct: 263 SQKDLGLTIKGSNLCNEIHLVT--------DEKRTAVCCLSSVNLERYDEWKD-TSLIKD 313 Query: 485 AVRALDAL----LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 +R LD + +D+ I A+ A R+LG+G + F YL H + A + Sbjct: 314 LIRFLDNVLQFFIDHAGDEISKARYSASRERSLGLGAMGFHSYLQLHRVPFESQRAKEIN 373 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 + F+ I+ L+ + L E+G P Sbjct: 374 EEIFKRIKEQALEETLILGAEKGEAP---------------------------------- 399 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK------------ 648 + G RN+ L A+ P+ SS I N + IEP + ++ Sbjct: 400 ----DMAGTGRRNAHLLAIAPNANSSLILNTSPSIEPWKANAFTSRTRVGSHLNKNKYLE 455 Query: 649 --------------------DGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKF 688 G ++Q+ + L + ++ EM D + L G QK+ Sbjct: 456 QELEKIGKNTEEVWSDIITNGGSVQQLDFLSKELKEVFKTAIEM-DQDWLVYLGGERQKY 514 Query: 689 IDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLV-- 746 + Q S N FP+G L K A+K+G K LYY T Sbjct: 515 LCQGQSLNVF-----FPAG-ASRGYLHKVHFNAWKYGCKGLYYLRTETSNRAENISKKVE 568 Query: 747 -------PSIQDDGCESGACK 760 I+ E AC+ Sbjct: 569 KKRLVEFSEIKQSENECIACE 589 >UniRef50_A4VFR5 Ribonucleoside-diphosphate reductase n=32 Tax=Proteobacteria RepID=A4VFR5_PSEU5 Length = 745 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 134/648 (20%), Positives = 223/648 (34%), Gaps = 99/648 (15%) Query: 151 LEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTP 210 KY + ++ I ++ + VA L P + R + +RF A+ I Sbjct: 57 WSQKYRLSSKDGTPIDQTVDDTWQRVARALADVEPAKQREHWYERFLWALRNGAI-PAGR 115 Query: 211 IMSGVR----TPTRQFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALG 265 I+S P +C + DS+D I + GIG +R G Sbjct: 116 IISNAGAQDYKPATSTINCTVSGSITDSMDDILGKVHEAGLTLKAGCGIGYEFSTLRPRG 175 Query: 266 SPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGV 325 S + G A +G + F F + S G R GA + + H +V + K G Sbjct: 176 SFVSGAGAHTSGPLSFMDIFDKMCFTVSSAGGRRGAQMGTFDVGHPDVREFIRAKREDG- 234 Query: 326 EGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFA-DQEEFERLYTKY-- 382 R+R + + I + + L P + A D + R + + Sbjct: 235 ---RLRQFNLSLLITDEFMQTVEADGEWPLIFPVHAKEAAELDLADDAQVIWREWPVHDG 291 Query: 383 --EKDDSIR----KQRVKAVELFSLMM---QERASTGRIYIQNVDHCNTHSPFDPAIAPV 433 +DD + RVKA L+ ++M + A G I I V+ N + + + Sbjct: 292 YIVRDDGLVACKIYGRVKARHLWDMIMVSTYDYAEPGFILIDRVNQLNNNWWCE----AI 347 Query: 434 RQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL----------GAINNLDELEELAI 483 R +N C E LP C L + NL A + D+ E+ Sbjct: 348 RATNPCGEQPLPP------------YGSCLLGSINLTHFVIDPFGVEARFDWDKYREVVR 395 Query: 484 LAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKT 543 + R LD +++ P+ + +R G+G + L RY A T + Sbjct: 396 VFTRMLDNVVEINGLPLEQQRHEIESKRRHGMGFLGLGSTLTLLKLRYGSPEACVFTEEV 455 Query: 544 FEAIQYYLLKASNELAKEQGACPW----FN---ETTYAKGILPIDTYKKDLDTIANEPLH 596 + + + EL+KE+G P F E + + D YK D IA LH Sbjct: 456 SREMALVGWEQALELSKEKGPAPLLSQNFEVTAEMLRKRPEMAKDGYKVG-DQIAGRVLH 514 Query: 597 YDWEALRESIKTH-----------GLRNSTLSALMPSETS--SQISNATNGIEPPRGYVS 643 + + I + G R + S++ P+ T S +NA+NGIEP + Sbjct: 515 AKYSRYMQKIAEYAPDLIEALAEQGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHY 574 Query: 644 ----IKASKDGILRQVVPDYEHL--------------------HDAYELLWEMPGNDGYL 679 I+ + + V YE L Y + + ++ Sbjct: 575 SRNLIRPGRKAKEKIEVFSYELLAYRTLINARAKPGSDEPGEKLPDYFITADDVSPTQHV 634 Query: 680 QLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK 727 + QK++D SIS N P + A++ G+K Sbjct: 635 DIQAAAQKWVDSSISKTANVP------TDYPFEAFKDIYRYAWRQGLK 676 >UniRef50_Q5DN91 Ribonucleotide reductase n=1 Tax=Phage phiJL001 RepID=Q5DN91_9CAUD Length = 602 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 117/623 (18%), Positives = 220/623 (35%), Gaps = 112/623 (17%) Query: 167 ESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFS-SC 225 ES + VA L ++ K + + + + + + + + +C Sbjct: 45 ESFREGMGRVANALKDGE------EHYKELREILLDMRFMPAGRVQAAMGSTKNVTAYNC 98 Query: 226 VLI-ECGDS-LDS---INATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIP 280 + DS +D I + + GIG + +R G+ I+ ++ +G + Sbjct: 99 YVSGTIEDSFIDGHGSIMERAKQAAATMRMGGGIGYDFSTLRPNGALIKKLQSRSSGPLS 158 Query: 281 FYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQIN 340 F + + + K + G R GA + H ++E + K+N + + + + I Sbjct: 159 FMQIYDSVCKCVASSGHRRGAQMGVLRVDHPDIEEFIRAKHN----EDNLTGFNTSIAIT 214 Query: 341 KLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFS 400 ++ GE L + + A L+ Sbjct: 215 DRFMECVISGEPFPL----------------------------TFGGETYRSINAENLWE 246 Query: 401 LMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIA 460 ++M+ +D N + + +N C E LP Sbjct: 247 MIMRSTWDWAEPGTLFIDQINRMNNLK-YCETIAATNPCGEQPLPP------------YG 293 Query: 461 LCTLSAFNLGAI------------------NNLDELEELAILAVRALDALLDYQDYPIPA 502 C L +FNL + D VRA+D ++D YP+ Sbjct: 294 ACLLGSFNLVKYVKPFTGRVFVVGADSRWTFDWDLFATDVYAVVRAMDNVVDRAIYPLFE 353 Query: 503 AKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQ 562 ++ A +R +G+GV A G Y + E + +AS ELA+E+ Sbjct: 354 QEKEAKSKRRMGLGVTALANAAEALGMPYGSIEFLKFEGQVLETLACNSYQASVELAQEK 413 Query: 563 GACPWFNE----TTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSA 618 GA P ++E + Y + +LP E L+E I +G+RNS L++ Sbjct: 414 GAFPLYDERYLDSEYVRQVLP--------------------EELQEDIGRYGIRNSHLTS 453 Query: 619 LMPSETSSQIS-NATNGIEPPRGYVSIKA--SKDGILRQVVPDYE-HLHDAYELLWEMPG 674 + P+ T S + N ++GIEP Y + DG+ + V DY + + Sbjct: 454 IAPTGTISLTADNVSSGIEPVFSYGYDRTVHMPDGVRTERVDDYGVRVFGVEGKTSDQVT 513 Query: 675 NDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK---TLYY 731 + ++ ++ + Q F+D ++S N P +P + + A++ G K T Sbjct: 514 AEEHVDVLTVAQGFVDSAVSKTCNVAP------DMPWEDFKQIYFRAWEGGAKGCTTFNS 567 Query: 732 QNTRDGAEDAQDDLVPSIQDDGC 754 R G + DD +I+ + C Sbjct: 568 GGKRFGVLRSDDDDQSNIEGEAC 590 >UniRef50_B1HS20 Ribonucleoside-diphosphate reductase n=28 Tax=Bacteria RepID=B1HS20_LYSSC Length = 866 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 136/699 (19%), Positives = 250/699 (35%), Gaps = 144/699 (20%) Query: 164 EIYESAQFLY-----ILVAACLFSNYP-RETRLQYVKRFYDAVSTFKISLPTPIMSGVRT 217 ++ E ++ A L E R ++ ++FYD + + K ++ G + Sbjct: 132 DVLEKPLEIFYEQIAKRNATGLAIVEKTPEKRQEWFEKFYDQLVSLKFIPAGRVIYGAGS 191 Query: 218 PTR-QFSSCVLIE-CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFH 275 T F +C ++ DS + I+ +++ +S+ G+G N +R + RG Sbjct: 192 ETDVTFFNCYVMPFVADSREGISDHRKQVMEIMSRGGGVGTNGSTLRPRNTLARGVNGKS 251 Query: 276 TGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK-----------NNRG 324 +G + + QGG R GA + WH ++ ++ K N Sbjct: 252 SGSVSWLDDIAKLTHLVEQGGSRRGAQMIMLADWHPDIVEFIISKMQNPRILRYLIENTT 311 Query: 325 VEGN----RVRHMDYGVQINKLMY-------------------------TRLLKGEDITL 355 E + + + + + +L G T+ Sbjct: 312 DETIIRLAKEKLNFKPLSMQEEAMYQGIVNYKSIEGLGGFDTAIIREAENKLRDGGTYTV 371 Query: 356 FSPSDVPG------LYDAFFADQ------------------EEFERLYTKYEKDDSIRK- 390 +P + G L F EE T++ +R+ Sbjct: 372 HNPEFLTGANISVTLTKEFMEAVENDDDFELRFPAVEEYSKEEMSAYNTEWHNVGDVREW 431 Query: 391 ----------QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 + +KA EL++L+ + I +D+ N + V +N C Sbjct: 432 EKMGYKIRTYRTIKAKELWNLINVCATYSAEPGIFFIDNANDMTNAKAYGQSVVATNPCG 491 Query: 441 EIALPTKPLNDVNDENGEIALCTLSAFNLGAI-------NNLDELEELAILAVRALDALL 493 E L ++C L+A NL + + L E + VR D ++ Sbjct: 492 EQPLAP------------YSVCNLAAVNLAQFANKDNQTVDYEALRETVRVGVRMQDNVI 539 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 D Y + + A+G R +G+GV+ A L K Y + N L + F+ I + Sbjct: 540 DATPYFLEENRVQALGERRVGLGVMGLADLLIYCEKEYGSEAGNALVDEIFKTIAETAYE 599 Query: 554 ASNELAKEQGACPWF-----NETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKT 608 AS ELAKE+G+ P+ ET + + + + ++E I Sbjct: 600 ASTELAKERGSFPFLVGATDEETARLRKAFTETGFMEKMPA-----------HIKEQILA 648 Query: 609 HGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGIL-------------RQV 655 G+RNS L + P+ ++ + G+EP + ++ + G R Sbjct: 649 TGIRNSHLLTVAPTGSTGTMVGVATGLEPYFSFTYYRSGRLGKFIEVKAEIVKEYLDRHP 708 Query: 656 VPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLL 715 + + L + + E+ + + + I+QK+ID SIS N P G +QQ+ Sbjct: 709 EANEQELPEWFVTAMELK-PEAHADVQCIIQKWIDSSISKTVNA-----PKG-YTVQQVE 761 Query: 716 KDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDD 752 K YK G K T+Y DG+ D+Q + + ++D Sbjct: 762 KVYERLYKGGAKGGTVYV----DGSRDSQVLTLKAEEND 796 >UniRef50_Q66663 Ribonucleoside-diphosphate reductase n=8 Tax=root RepID=Q66663_EHV2 Length = 799 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 154/756 (20%), Positives = 278/756 (36%), Gaps = 110/756 (14%) Query: 58 IHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEP--PALYDHVVKMVEMGKY 115 I I A DL + +A RL F + ++A D + K V + Sbjct: 27 IDTLKISAGWDL------EANRMAGRLYHFVMGRRAPVDTRAYVTTFGDKLEKGVHRFLW 80 Query: 116 DNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTG---EIYESAQFL 172 DN ++ K +++R ++ + K++ Y+++ G +YESA + Sbjct: 81 DNARD---IDDLCKDFQNGPEYERLISRGMLSAKRMYDTYVLRTEEGGGEGAVYESALQM 137 Query: 173 YILVAA---CLFSNYPR---------------ETRLQYVKRFYDAVSTFKISLPTPIMSG 214 Y +AA C YP E+ L + F+ +++ +S TP+M Sbjct: 138 YARMAAFFTCQCFAYPSLRKTVSEVEGGSGRMESGLDFFAYFFKILASQLVSCATPVMRS 197 Query: 215 VRTPTRQFSSCVLIECGDSLDS--INATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGE 272 +SC ++ S + ++A + + ++G+G+N + G ++ Sbjct: 198 AGLRQSYLASCFIMNPDMSTEDKTLSAVFRDLSPLLCSKSGVGMNLTNFSSGGKNVQSC- 256 Query: 273 AFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRH 332 + + V+ C+ +R + + +WH ++E L K E R + Sbjct: 257 ---------LRLINSQVEFCNDKNLRPVSVAAYMELWHEQIEEFLAAKLPENPE--RCQS 305 Query: 333 MDYGVQINKLMYTRLLKGED--ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK 390 + GV + L + + D LFSP L + ++F+ Y + + + Sbjct: 306 IFQGVCVPGLFFRLYEQNPDSQWHLFSPKVGGHLAGLY---GDKFDEEYARLVRHG-LYS 361 Query: 391 QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIAL-PTKPL 449 + A L ++ TG YI + D N H F+ + +NLC E+ P + Sbjct: 362 SSLPAKSLMFALISAIIKTGSPYILSKDAINRHHWFETQGNAISYANLCAEVVQQPHEFT 421 Query: 450 NDVNDENGEIALCT--------------------LSAFNLGAINNLDELEELAILAVRAL 489 + N N + C LS D L AV + Sbjct: 422 STCNLANVCLPACLRARGEGEGAGAAGEGEGADRLSPLTPDLEFCFDTLRAAVRAAVYMI 481 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 +A + P P + R+ GIGV A AK G+ Y D + L + FE + Y Sbjct: 482 NASILGGVCPTPGVRVM-QAERSAGIGVQGLADVFAKLGRGYMDAESALLDARIFEVMYY 540 Query: 550 YLLKASNELAKEQGACP--WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 ++ASN+L GA P + + ++G +++ D++ E WE LRES+ Sbjct: 541 QAVRASNQLVTVGGAPPHANWKNSKLSRGEFHWESWGVQYDSLFIE--RQLWEELRESVT 598 Query: 608 THGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK------------------- 648 HG NS ALMP+ +SQ++ + P VS K S Sbjct: 599 KHGTFNSQFIALMPTAGTSQLTGLSESFYPFYANVSSKVSNKEEVMKPNITFLERVSPSD 658 Query: 649 -------DGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDP 701 G + ++ P + + ++ D ++ F+DQS S + Sbjct: 659 VPLLKYHGGDVSKLPPPLAAKYRNFLTAFDYSPEDQ-IRRAAARSPFVDQSQSFSFFLKE 717 Query: 702 SRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRD 736 + S + +L + G+KT +YY + Sbjct: 718 ANVKS----ASYVKNLILLGHGLGLKTIMYYCRIQK 749 >UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=6 Tax=Clostridium difficile RepID=Q18BC3_CLOD6 Length = 729 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 136/778 (17%), Positives = 260/778 (33%), Gaps = 174/778 (22%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQF---YDGI----KTSDI 58 + KRDG+ E + KI + A+ ++ + Y+ + +I Sbjct: 3 YIIKRDGTKELFSKSKIEDAVYKASINSEGGVDRELAYDISRKIANDYNSMEKCLSVEEI 62 Query: 59 HETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNH 118 + + L + RK + LY + + Sbjct: 63 QDIVEV-------------------LLMESNRKDIAKHY---ILYRERRSEIRTKAW--- 97 Query: 119 LLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 EF ++ I + KY R G ES ++ Sbjct: 98 --------EFDELQKSI---------------WKNKY----RHNG---ESFDEWIKRIS- 126 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR----QFSSCVLI-ECGDS 233 R + + I++ +S+C +I DS Sbjct: 127 ------------NNSSRISKLIRQKRFLFAGRILANRGLQKEGKKVTYSNCYVIEPPKDS 174 Query: 234 LDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCS 293 ++ I T+ + + S G+GI+ ++R G+ + TG + F + + Sbjct: 175 IEDIFDTAKKLARTFSYGGGVGIDISKLRPKGAKVNNAAKHTTGAVSFMELYSMTTGLIG 234 Query: 294 QGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDI 353 Q G R GA + + H E+E + +K + +V + V++ + + + Sbjct: 235 QRG-RRGALMISMDVNHPEIEDFIDIKT----DLEKVTKANISVRVTDEFMQAVREKK-- 287 Query: 354 TLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIY 413 LY+ F + E + V A +LF+ ++ Sbjct: 288 ----------LYNCTF-----------EVETTGEKIVKIVNAYDLFNKFVKNNWDYAEPG 326 Query: 414 IQNVDHCNTHSPF-DPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI 472 I D T++ + N C E LP+ C L + NL Sbjct: 327 ILFWDKIKTYNFMSEDKNFCFSGVNPCAEEPLPSG------------GSCLLGSINLSEF 374 Query: 473 ----------NNLDELEELAILAVRALDALLD--YQDYPIPAAKRGAMGRRTLGIGVINF 520 ++++L+ AV AL+ +LD +P+ + R +G+GV+ Sbjct: 375 IIQPFGEHATFDINKLKSCVREAVVALNDVLDEGLNLHPLQEQRDSVHKYRQIGLGVMGI 434 Query: 521 AYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPI 580 A L K G RY + L + + +K S +AKE G + +K I Sbjct: 435 ADMLIKMGIRYGSDESLELCDLIGKTMLNEAVKQSALIAKEYGTFSEYKYENISKSKFFI 494 Query: 581 DTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRG 640 + +D +E +K +GLRNS L + P+ + S + + GIEP Sbjct: 495 ENLNEDT---------------KEMVKKYGLRNSQLLTIPPTGSISTMIGISGGIEPIFN 539 Query: 641 YVSIKAS-----------------KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVG 683 I+ + K+ + ++ + D E L D + + G + + + Sbjct: 540 LSYIRKTESLHDEDVYYKVYTPIVKEYMDKKGITDEECLPDFFVTAMNI-GYEERINMQK 598 Query: 684 IMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDA 741 + QK+ID SIS+ N + ++ + + A++ G+K + RDG + + Sbjct: 599 VWQKYIDASISSTINIPF------ETTVEDVFNIYIKAWEAGLKGVTIF--RDGCKRS 648 >UniRef50_Q77MS1 Ribonucleoside-diphosphate reductase n=9 Tax=Herpesviridae RepID=Q77MS1_GAHVM Length = 822 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 132/617 (21%), Positives = 226/617 (36%), Gaps = 90/617 (14%) Query: 196 FYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC--GDSLDSINATSSAIVKYVSQRAG 253 F+ A++ TP M + +SC L++ ++ D++ A + +V ++ R G Sbjct: 236 FFLALANQLFVPSTPCMLFLGREGTSTASCYLMDPRTNNTQDTLKAITEDVVPHLLARGG 295 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 IGI+ + G + K + V + + R ++ WH ++ Sbjct: 296 IGISLQHLNGK-----------FGLMHVMKVLDSLVMAANVNESRPTGICVYLEPWHADI 344 Query: 314 ESLLVLKNN-RGVEGNRVRHMDYGVQINKLMYTRL------LKGEDITLFSPSDVPGLYD 366 S L ++ E R ++ + L++ R K TLF Sbjct: 345 MSALNMRGMVAAEESRRCDNVFLALWSCDLLFKRYLRHVNGEKNVIWTLFD----SRASI 400 Query: 367 AFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPF 426 EEFE+ Y + E + + + ++ +++ ASTG +I D CN H Sbjct: 401 LTKLHSEEFEKEYERLES-EGLGVASIPIRDMMFAIIKSAASTGSPFILFKDACNRHYIT 459 Query: 427 DPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------NNLDE 477 + + SNLC EI T + +C+L++ NL + D Sbjct: 460 NTQGDAIAGSNLCTEIIQKTDANTN--------GVCSLASINLARCVRNIDGNRQFDFDA 511 Query: 478 LEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSAN 537 L LA ++A+++ D P + G R++GIGV F G D A Sbjct: 512 LRYAVRLATVFVNAIMEGSDVPTEKSHSGRERNRSMGIGVQGFHTAFLSMGLDLCDERAR 571 Query: 538 NLTHKTFEAIQYYLLKASNELAKEQGACPW--FNETTYAKGILPIDTYKKDLDTIANEPL 595 +L FE + + S E E+G P+ F+ + YA+G L D + Sbjct: 572 SLNKLIFEFMLLEAMTVSCEFC-ERGLPPFADFSNSYYARGRLHFDGWAN-----VELAA 625 Query: 596 HYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG-ILRQ 654 +W LR+ I + GL N+ ALMP+ S+Q++ + G P + K + G +LR Sbjct: 626 VEEWNMLRDRIVSAGLYNAQFIALMPTAASAQVTEVSEGFSPLFSNMFSKVTSTGELLRP 685 Query: 655 VVPDYEHLHDAY--------------ELL-WEM-----PGNDGY---------------- 678 + E L Y E W + + + Sbjct: 686 NIQLMEELRTIYLDNENQRLATIAALESANWNIQTALGNKPECHSLLKYKTAFDYDQALL 745 Query: 679 LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDG 737 + L F+DQS S + G + +++ LL AYK G+KT +YY R Sbjct: 746 IDLCSDRAPFVDQSQSMTLFITET--ADGTLLASRVMNLLLHAYKAGLKTGMYYCKIRKA 803 Query: 738 AEDAQDDLVPSIQDDGC 754 + C Sbjct: 804 TNAGVFCGDGELTCSSC 820 >UniRef50_C6JQA3 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JQA3_FUSVA Length = 754 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 123/639 (19%), Positives = 226/639 (35%), Gaps = 115/639 (17%) Query: 146 AAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKI 205 + E KY E E V+ + + ++ + Sbjct: 13 LGIDIWEKKYKYDGETFSEWLE-------RVSGG-------------EQELKEMIANKEF 52 Query: 206 SLPTPIMSGVRT----PTRQFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGR 260 I+S +S+C +I D+L+SI T+ + + S G G++ + Sbjct: 53 IFAGRILSNRGLYKLGRKITYSNCYVIAPPEDNLESIFDTAKKLARTYSYGGGCGVDISK 112 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 +R GS + TG I F + + Q G R GA + + H +V + +K Sbjct: 113 LRPRGSEVNNSAKHTTGSISFMELYNLTTDIIGQKG-RRGALMISIDVNHPDVSEFISIK 171 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 + N+++ + V+++ +++G EF Sbjct: 172 ----SDLNKIQKANISVRVDANFMKAVIEG------------------MQFVTEF----- 204 Query: 381 KYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPF-DPAIAPVRQSNLC 439 E + + + A +LF + ++ I D + + + +N C Sbjct: 205 LVEDTGEVVTKEIDARKLFKELARQNWKFAEPGILFWDRISKWNLLSEDEEFEYAGTNPC 264 Query: 440 LEIALPTKPLNDVNDENGEIALCTLSAFNL-----GAINNLDELEELAILAVRALDALLD 494 E LP C L + L G N D L ++ +V+AL+ +LD Sbjct: 265 AEEPLPAG------------GSCLLGSLILPTFVEGKEFNFDRLAKVVQKSVKALNDVLD 312 Query: 495 --YQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLL 552 +P+ + R +G+G++ L K G +Y + K + I L Sbjct: 313 EGLPLHPLEEQRESVRDWRQIGLGILGVGDLLIKIGMKYGSPESLEFCDKIAKVIVDNAL 372 Query: 553 KASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLR 612 KAS LAK+ GA P + K ++ + E I+ +GLR Sbjct: 373 KASALLAKDFGAYPKYKADKVLKSEFLLENASIET---------------LELIEKYGLR 417 Query: 613 NSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS-----------------KDGILRQV 655 NS L + P+ + + + GIEP + ++ + K + Sbjct: 418 NSQLLTIAPTGSIGTMLETSTGIEPNFAFSYVRKTESLHGEDVFYKVFIPIAKKYMEENN 477 Query: 656 VPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLL 715 + D E L + + + D +++ G+ QK ID SIS+ N KV ++++ Sbjct: 478 ITDEEDLPEYFVTAQSLNPYDR-IKMQGVWQKRIDASISSTINLV------NKVSVEEVE 530 Query: 716 KDLLTAYKFGVK--TLYYQNT-RDGAEDAQDDLVPSIQD 751 K L A+K G+K T+Y R+G I++ Sbjct: 531 KLYLEAWKNGLKGMTIYRAGCDREGILTVTPKAEKKIEE 569 >UniRef50_Q01037 Ribonucleoside-diphosphate reductase large subunit n=6 Tax=root RepID=RIR1_SHV21 Length = 767 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 151/759 (19%), Positives = 271/759 (35%), Gaps = 99/759 (13%) Query: 59 HETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNH 118 ETII D++ + + + A ++ K + ++ + H Sbjct: 3 QETIISNLIDML-KVSAGWDREANEISGRLFHK-LMDMSSTETISQYMSLF--GPLLEPH 58 Query: 119 LLEDY--TEEEFKQMDTFIDHDRDM----TFSYAAVKQLEGKYLV--QNRVTGEIYESAQ 170 +LE E+E ++ D K+ Y++ + + G+ YES Sbjct: 59 ILEFIQNYEQEIDEVCLEYRASYDFMCLRNCGILPAKRFYDTYVLPPRTEMNGK-YESIP 117 Query: 171 FLYILVAACLFSN--------------------YPRETRLQYVKRFYDAVSTFKISLPTP 210 + +AA N +T +Q K FY +S+ + TP Sbjct: 118 HFFARIAAYCAWNCIMCEPLKDTLVYVQKRDWNVEIKTDMQIFKYFYKVISSQLVCCATP 177 Query: 211 IMSGVRTPTRQFSSCVLIECG-DSLDS-INATSSAIVKYVSQRAGIGINAGRIRALGSPI 268 +M SSC +I D+ S I++ + ++ R+G+G++ + G I Sbjct: 178 VMRSAGVAGENLSSCFIIAPTLDTEKSTISSIFGELAPLLASRSGVGVDVTKFSFGGKNI 237 Query: 269 RGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGN 328 K V+ + VR + + +WH ++ L K + Sbjct: 238 HSC----------LKLINAQVEFFNDKSVRPVSVATYIEVWHCQIHEFLSAKLPENPD-- 285 Query: 329 RVRHMDYGVQINKLMYTRLLKGED--ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDD 386 R + GV + L + + LF P D P L + EFE Y + + Sbjct: 286 RCNSIFQGVCVPSLFFKMYESDPNGLWYLFDPQDAPNLTRLY---GLEFEEEYLRLVS-E 341 Query: 387 SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIAL-P 445 KQ V L ++ TG Y+ + + N H ++ + SNLC EI P Sbjct: 342 KKYKQSVTLKSLMFSLINTIIKTGSPYVISKEAMNKHHWYETQGEAINCSNLCAEIVQQP 401 Query: 446 TKPLNDVNDENGEIALCTLSA-----FNLGAINNLDELEELAILAVRALDALLDYQDYPI 500 + + N N + C S+ + A + +LE AV ++A + P Sbjct: 402 KQFTSTCNLANVCLPKCLNSSNFPYTCSNTAQFDFSKLEYAVQAAVFIINACI-LSPSPT 460 Query: 501 PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAK 560 +A G R++GIG A ++ G Y D + L FE + Y +K S+E+ Sbjct: 461 SSATVG-QRERSMGIGCHGLADVFSEMGYGYLDLESECLDRDIFETMYYTAVKTSSEICS 519 Query: 561 E-QG-ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSA 618 +G F ++ A G+ T+ D + W L+++IK G+ NS A Sbjct: 520 VGKGQPFAGFRKSKLAHGVFHWATW----DAMPQRVPMKQWIHLQDNIKKFGVFNSQFIA 575 Query: 619 LMPSETSSQISNATNGIEPPRGYVSIKASK--------------------------DGIL 652 LMP+ +SQ++ T+ P +S K S G + Sbjct: 576 LMPTAGTSQLTGYTDSFYPYFANMSSKVSNKEEIMKPNITFLKNVKPQDLCTVRFYGGDV 635 Query: 653 RQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQ 712 + D + + ++ + ++ I ++DQS S S K Sbjct: 636 SMMPEDVSTRYKHFLTAFDY-CPEAQMRRASIRAPYVDQSQSLTLFLTEENVQSAK---- 690 Query: 713 QLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQ 750 L LL ++ G+KT +YY + + Q + + + Sbjct: 691 YLKDLLLLGFRLGLKTIMYYCRVKKTTKLLQLECLKLDE 729 >UniRef50_A5FCJ4 Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ4_FLAJ1 Length = 565 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 134/649 (20%), Positives = 236/649 (36%), Gaps = 154/649 (23%) Query: 149 KQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLP 208 + L YL++ E+ + + R + + + F + + +S+ Sbjct: 30 QILNRGYLLKG-------ETVEGAIDRICTAAA---RRLYKPELKESFVEMIERGWMSIS 79 Query: 209 TPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPI 268 +P+ + + T SC + D ++ I ++ G G +R GS + Sbjct: 80 SPVWANMGTERGLPISCFNVHVPDKIEGITHKLGEVIMQTKIGGGTSGYFGELRERGSAV 139 Query: 269 RGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGN 328 +G + F K F TA+ + SQGGVR GA + + H ++E L +K+ GN Sbjct: 140 -TDNGKSSGAVSFMKLFDTAMDTISQGGVRRGAFAAYLDIDHPDIEEFLKIKSI----GN 194 Query: 329 RVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSI 388 ++++ G+ + ++ G+ Sbjct: 195 PIQNLFTGICVPDYWMQEMIDGD------------------------------------- 217 Query: 389 RKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP--FDPAIAPVRQSNLCLEIALPT 446 ++++ +++ R G YI D+ N + P + + SNLC EI LP+ Sbjct: 218 ----ADKRQIWAKVLESRQQKGLPYIFFSDNVNKNKPQVYKDQNLRINASNLCSEIMLPS 273 Query: 447 KPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLD------YQDYPI 500 E +C LS+ NL + E LA+ LDA+L +Y + Sbjct: 274 TH--------DESFICCLSSMNLELYEEWKD-TEAVKLAIFFLDAVLQEFIEKTEGNYYL 324 Query: 501 PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAK 560 AA + A R LG+GV+ + YL K+ + A T + F+ I KAS ELA+ Sbjct: 325 SAANKFAKRHRALGLGVLGWHSYLQKNMIPFEGMEAKMKTTEIFKHISDKADKASQELAR 384 Query: 561 EQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALM 620 G E +K +G RN+T A+ Sbjct: 385 IYGEP--------------------------------------ELLKGYGRRNTTTMAIA 406 Query: 621 PSETSSQISN-ATNGIEPPRGYVSIKASKDGILRQVVPDYEHL----------------- 662 P+ +SS I + GIEP G + + L Sbjct: 407 PTTSSSAILGQTSPGIEPFSSNYYKAGLSKGNFMRKNKYLKKLLEEKGLDNEEVWRGIML 466 Query: 663 ---------------HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSG 707 D ++ E+ + +Q GI QKF+DQ S N N Sbjct: 467 NGGSVQHMSQLTQQEKDVFKTFKEISQLE-IVQQAGIRQKFVDQGQSLNLNIP------A 519 Query: 708 KVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCES 756 ++ ++ + + ++ A++ GVK+LYYQ ++ +++ LV CES Sbjct: 520 ELAIKDVNRLMIEAWQQGVKSLYYQRSQSVSKELVTSLVS---CSSCES 565 >UniRef50_A9J500 Putative uncharacterized protein gp07 n=2 Tax=unclassified Siphoviridae RepID=A9J500_9CAUD Length = 580 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 114/618 (18%), Positives = 205/618 (33%), Gaps = 117/618 (18%) Query: 175 LVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVR-TPTRQFSSCVLI-ECGD 232 +AA L + Q+ F DA+ + I S + T +C + D Sbjct: 3 RIAAAL------KDDDQHFADFRDALLGMRFLPAGRIQSAMGSTRQVTPYNCYVSGTIND 56 Query: 233 SL----DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTA 288 S SI ++ + GIG + +R G IR ++ +G I F F Sbjct: 57 SFVDGEGSIMVRAAEAAATMRMGGGIGYDFSTLRPRGDLIRKLQSHSSGPISFMHIFDAI 116 Query: 289 VKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGV----------------------- 325 K + G R GA + H ++E + K Sbjct: 117 CKCVASSGHRRGAQMGVMRVDHPDIEEFIHAKQPGKDVQPLWDLVAELPEGAQKQQLIMS 176 Query: 326 --EGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE 383 + ++ + V I + GE L Sbjct: 177 LQQTLKLTGFNVSVAITDKFMECVASGEPFPL---------------------------- 208 Query: 384 KDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIA 443 + + V A L+ +M+ + +D N + + +N C E Sbjct: 209 TFEGRTYREVDARALWDAIMRGTWDWAEPGVLFIDAINRMNNL-WYCETIAATNPCGEQP 267 Query: 444 LPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVRALDALL 493 LP C L +FNL + D+ E VRA+D ++ Sbjct: 268 LPP------------YGACLLGSFNLVKYIYKDGAGCFAFDWDQYREDIPQVVRAMDNVV 315 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 D YP+P K+ A +R +G+G+ A G Y + + + ++ Sbjct: 316 DRAIYPLPQQKQEAKDKRRMGLGITGLANAAEALGHEYGSPAFLAFEAEVLDTLRDESYL 375 Query: 554 ASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 AS +AK +G+ P F++ Y +G E +R++I +G+RN Sbjct: 376 ASAHIAKVKGSFPKFDKDKYLQGQFIKTLR----------------EDVRDAIAKYGIRN 419 Query: 614 STLSALMPSETSSQIS-NATNGIEPPRGYVSIKASKD--GILRQVVPDY-EHLHDAYELL 669 S L+++ P+ T S + N ++GIEP Y + + G + V DY + Sbjct: 420 SHLTSIAPTGTISLCADNVSSGIEPVFAYSFDRTVIEFSGPRVETVEDYGARVFGVRGKT 479 Query: 670 WEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK-- 727 ++ + + + +D ++S N + + ++A++ G K Sbjct: 480 CSRVTVQEHVAALTVAAQRVDSAVSKTCNVP------SDISWEDFKNVYVSAWEGGAKGC 533 Query: 728 TLYYQ-NTRDGAEDAQDD 744 T + R G +DD Sbjct: 534 TTFRLGGKRSGILVVKDD 551 >UniRef50_P50643 Ribonucleoside-diphosphate reductase large subunit n=21 Tax=Herpesviridae RepID=RIR1_SUHVK Length = 835 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 133/623 (21%), Positives = 238/623 (38%), Gaps = 89/623 (14%) Query: 191 QYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC--GDSLDSINATSSAIVKYV 248 + ++ A++T I TP+M +SC L+ + +++ A + + + Sbjct: 244 EVFDAYFRALATQAIVPATPLMLFAGRARGSLASCYLLNPLPRTTEEAVRAITDEVAPIL 303 Query: 249 SQRAGIGINAGRIR--ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFY 306 +R G+G++ G R G + K + + + R ++ Sbjct: 304 LRRGGVGLSLQSFNRTPSGDCTR-------GIMAVLKALDSMTAAINSDSERPTGVCVYV 356 Query: 307 PMWHLEVESLLVLKNN-RGVEGNRVRHMDYGVQINKLMYTRLLKGED------ITLFSPS 359 WH +V ++L ++ E R ++ + L + R + D TLF Sbjct: 357 EPWHADVRAVLNMRGMLAADESLRCDNIFSCLWTPDLFFQRYQRHLDGERAVKWTLFDDR 416 Query: 360 DVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDH 419 +F R Y + E+ + + ++ L+++ TG ++ D Sbjct: 417 ASHLAS----LHGPDFAREYERLERLGLGVE-SLPIQDMAFLIVRSAVMTGSPFLMMKDA 471 Query: 420 CNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL-----GAINN 474 CN H D A + SNLC EI P GE +C L++ NL G + Sbjct: 472 CNRHFHTDTRGAALATSNLCTEIVQRATP--------GENGVCNLASVNLPACLAGGAFD 523 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 L A +A ++A++ +YP A+ G R+LGIG+ + +D Sbjct: 524 FAALRRAARVAAVFVNAMMRIGNYPTGASVEGVRRSRSLGIGLQGLHTTVLALDMDMADP 583 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKEQG--ACPWFNETTYAKGILPIDTYKKDLDTIAN 592 +A L E + Y ++ AS EL E+G F + YA+G++P D Y++ Sbjct: 584 AARRLNAAIAEELLYGVMDASVELC-ERGLRPFDGFEHSRYARGVMPFDAYER---VSLR 639 Query: 593 EPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG-I 651 EP+ W+ALR I HG+ N+ ALMP+ +SSQ++ ++ G P + K + G + Sbjct: 640 EPMR--WDALRVRIAEHGVYNAQFVALMPTVSSSQVTESSEGFSPTFTNMFSKVTISGEL 697 Query: 652 LRQVVPDYEHLHDA------------------------------------YELLWEMPGN 675 LR +P E L ++ +E Sbjct: 698 LRPNLPLMETLRRLFPRECARRDAVARLERAQWSVAAAFGELPAGHPLAKFKTAFEY-DQ 756 Query: 676 DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNT 734 + + + F+D S S + GK+ +++ L+ AY G+KT +YY Sbjct: 757 ELLIDMCADRAPFVDHSQSMSLFLTEP--ADGKLHASRVMGLLMRAYNLGLKTGMYYCKI 814 Query: 735 RDGAEDAQDDLVPSIQDDGCESG 757 R + + D C S Sbjct: 815 RKATNNGVF----TGGDLVCTSC 833 >UniRef50_A0MN59 Ribonucleotide reductase alpha subunit n=1 Tax=Thermus phage phiYS40 RepID=A0MN59_9CAUD Length = 797 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 148/794 (18%), Positives = 271/794 (34%), Gaps = 156/794 (19%) Query: 77 YQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTF-- 134 Y A R+ ++ D K +E G+ +N L ++ F +++ Sbjct: 12 YGSEALRVLFDKIKSNFEED------VDTFEKFLEYGEPENALTKEEINNVFTELEKLGL 65 Query: 135 IDHDRDMTFSYAAVKQ----------------LEGKYLVQNRVTGEIYE--SAQFLYILV 176 I+ +D S+ VK+ + KY +++ + ++ V Sbjct: 66 IEEIKDELSSFYKVKKEDLIDGFFVQNISSEIYKQKYQLKDGKNKNELVDLTPYHTFVRV 125 Query: 177 AACLFSNYPR-------------ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPT---- 219 A + R +T + F+ ++T + + +MS + Sbjct: 126 ALAVALVNARYSKRLEKYGLDAFKTFVDDFLSFFYILATGRSTGAGRVMSNAGSKLYKTY 185 Query: 220 RQFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 +C ++ + DS+ I T + + AG G + IR G+ + G A +G Sbjct: 186 TTLINCTVMRQIPDSMHGIMETLTEASLTLKAGAGTGYDFSSIRPKGAFVHGAGAETSGV 245 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 + F + F + G R GA L + H E L + K N GV +R+ + + Sbjct: 246 VSFAEIFDKMCSTIMSAGGRRGAQMLVIDVRHPESIDLFMAKRNDGV----LRYFNISLL 301 Query: 339 INKLMYTRLLKGEDIT--------LFSPSDVPGLYD---AFFADQE----EFERLYTKYE 383 + ++ E+ F+PS+V F D+E E +L +YE Sbjct: 302 FPNSLMEKVKNDEEFEQWFWTFEMTFTPSEVIEKNGNNVFFIGDKEVVIVENGKLPYEYE 361 Query: 384 KDD-------------------------SIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 + D +RV+A E++ ++MQ I +D Sbjct: 362 EYDYFAFGEDHQVMKYENFGKDKYRIYKKEVFKRVRAREIYDIVMQSTYDYAEPGIIFID 421 Query: 419 HCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------ 472 + N + +R +N C E LP C L + L Sbjct: 422 NVNNKNVLK-GKEYIRATNPCGEQPLPP------------YGSCNLGSIFLHRFVKEPFN 468 Query: 473 --------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYL 524 + D+L E++ L R LD + D + P+ K A +R G+G+ A L Sbjct: 469 YDLKPEENFDFDKLFEVSRLMNRFLDFVNDITNLPLVQLKEAAFTKRRHGLGISGIADTL 528 Query: 525 AKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYK 584 G RY A K IQ + +A G P T + + K Sbjct: 529 IMVGLRYGSEEAAKFLEKIMYTIQLASAVENVRMADIYGPAP--VGVTLKEWVDVFGHLK 586 Query: 585 KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI--SNATNGIEPPRGYV 642 + L+ I E LR S ++ P+ T S +N NGIEP Sbjct: 587 EKLEEIYG-----------EDFYKLPLRYSHAISIAPTGTISLTFGNNVANGIEPTFALS 635 Query: 643 SIKASK-DGILRQVVPDYEH--------------LHDAYELLWEMPGNDGYLQLVGIMQK 687 ++ + G + + ++ + ++ D ++++ QK Sbjct: 636 YMRNIRLPGKKTKTQEEVYSFAAILFKNYFGHTNYNEYFVTTNDI-TVDEHIRMQASAQK 694 Query: 688 FIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD--GAEDAQD 743 ++D +IS N P + + + AY+ G+K T + N + G +D Sbjct: 695 YVDSAISKTCNVP------TDYPFEMFKEAYIKAYELGLKGFTTFRFNPKFSVGVLVKKD 748 Query: 744 DLVPSIQDDGCESG 757 DL + + ++G Sbjct: 749 DLENLLIEFETDTG 762 >UniRef50_C9L7Y1 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Blautia hansenii DSM 20583 RepID=C9L7Y1_RUMHA Length = 763 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 109/620 (17%), Positives = 216/620 (34%), Gaps = 105/620 (16%) Query: 184 YPRETRLQYVKR-------FYDAVSTFKISLPTPIMSGVRT----PTRQFSSCVLI-ECG 231 Y E+ +++ R + K I+S S+C ++ Sbjct: 24 YNNESFDEWLDRVSGGDSDLRQLILEKKFLFGGRILSNRGLDKLGEKVTLSNCYVVEPPE 83 Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS 291 D+++SI + + + S G G++ ++ G+ + +G + F + Sbjct: 84 DNIESIFDCAKKLARTYSYGGGCGVDISKLAPKGARVTNTAKETSGSVSFMDLYSLVTGL 143 Query: 292 CSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 Q G R GA + H ++E + +K + ++V + ++I + + Sbjct: 144 IGQNG-RRGALMISIACDHPDLEEFIEIK----SDLDKVTKANISIRITDKFMLAVKMRK 198 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERA---S 408 L +T+ E ++IRK + A +F + + Sbjct: 199 PFVL----------------------SFTREETGETIRK-EIDAYSVFHKLCEMNWDYAE 235 Query: 409 TGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFN 468 G ++ +++ N S +N C E LP C L + N Sbjct: 236 PGMLFWDRIENWNLLSA--DKEFSYAGTNPCAEEPLPAG------------GSCLLGSIN 281 Query: 469 LGAI------NNLDELEELAILAVRALDALLD--YQDYPIPAAKRGAMGRRTLGIGVINF 520 L N + ++ +AVRAL+ +LD +P+ + R +G+G+ Sbjct: 282 LSEFVTENKTFNFTDFKKTVDIAVRALNIVLDEGLPLHPLKEQRESVRDWRQIGLGIFGL 341 Query: 521 AYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPI 580 A L K G +Y + +L A+ Y + SN +A E G+ P + + Sbjct: 342 ADLLIKIGIKYGSPESIDLCDMIGHAMAYQAIMTSNSIAIEVGSYPKYKPDAVKQSPF-- 399 Query: 581 DTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRG 640 + + +D + RE+I GL NS L + P+ + S + + GIEP Sbjct: 400 --FTEHIDELY-----------RENISEIGLCNSQLLTIAPTGSLSSMLGVSGGIEPVYA 446 Query: 641 YVSIKASK-----DGILRQVVPDYEHLHDAYEL-----------LWEMPGNDGYLQLVGI 684 + ++ D + P + D Y L + + + I Sbjct: 447 NYYTRKTESLHGHDEYYKVYTPIVKKYIDEYGLKDDSELPDFFVTAQTLNYKERIDMQSI 506 Query: 685 MQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQN---TRDGAEDA 741 Q+ ID SIS+ N P+ F ++ L A++ G+K + R G Sbjct: 507 WQRHIDASISSTVNV-PNNF-----TVKDTEDLYLYAWEKGLKGVTIFRDGCKRTGILTT 560 Query: 742 QDDLVPSIQDDGCESGACKI 761 + + +++ + + Sbjct: 561 DNKKKETKENNSDSNVPITL 580 >UniRef50_C6LFM8 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=4 Tax=Bacteria RepID=C6LFM8_9FIRM Length = 757 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 120/598 (20%), Positives = 213/598 (35%), Gaps = 101/598 (16%) Query: 194 KRFYDAVSTFKISLPTPIMSGVRTPTR----QFSSCVLIECG-DSLDSINATSSAIVKYV 248 + + K I+S + +S+C +I D ++ I + + + Sbjct: 41 EEIARYIKEKKFLFGGRILSNRGLDQKDRKVTYSNCYVITPPKDEIEDIFECAKKLARTY 100 Query: 249 SQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPM 308 S G GI+ + G+ I +G + F + + Q G R GA + Sbjct: 101 SYGGGCGIDISGLAPRGARIHNAAKETSGAVSFMELYSMVTALIGQNG-RRGALMISIDS 159 Query: 309 WHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF 368 H +VE + LK + +V + V+I++ + + + L Sbjct: 160 SHPDVEEFINLKT----DLEKVTKANISVRIHEDFMKAVKENGEYLL------------- 202 Query: 369 FADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMM---QERASTGRIYIQNVDHCNTHSP 425 +T+ + I K V+A ELF + + A G ++ + N S Sbjct: 203 ---------SFTREVTGERIEK-TVQAKELFHKIALTNWDYAEPGALFWDRITGWNLLSN 252 Query: 426 FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL----------GAINNL 475 N C E LP C L + NL A ++ Sbjct: 253 TKE--FSYAGVNPCAEEPLPAG------------GSCLLGSINLSEFVQYPFTEAATFDM 298 Query: 476 DELEELAILAVRALDALLD--YQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSD 533 + + +VRAL+ +L+ +P+ + R +G+G++ A L K G Y + Sbjct: 299 EGFRKCVQASVRALNEVLEEGLPLHPLQEQRESVAKWRQIGLGIMGLADALLKLGLTYGE 358 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANE 593 A + K A+ + S ELAKEQGA P N A+ I+ + + Sbjct: 359 QDAVAMCDKIGFAMADAAIATSAELAKEQGAFPACN----AEEIMETPYFLANTS----- 409 Query: 594 PLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD---- 649 E RE ++ +GLRNS L + P+ T S + + GIEP + ++ Sbjct: 410 ------EKTRELVRKYGLRNSQLLTIAPTGTLSTMLGISGGIEPVYANSYQRKTESLHGT 463 Query: 650 ----GILRQVVPDYEHLHDA--------YELLWEMPGNDGYLQLVGIMQKFIDQSISANT 697 + ++V +Y H Y + M + + I Q ID SIS+ Sbjct: 464 DVYYKVYTKIVDEYMKQHGITEENALPGYFVTAMMLDYHQRIDMQSIWQTHIDASISSTV 523 Query: 698 NYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDG 753 N S +++ L A++ G+K T+Y + +D + +G Sbjct: 524 NVPNS------FTVEETESLYLYAWERGLKGITIYRDGCKRTGVLTTNDKKKVVAGEG 575 >UniRef50_O41962 Ribonucleoside-diphosphate reductase n=3 Tax=Murid herpesvirus 4 RepID=O41962_MHV68 Length = 783 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 146/777 (18%), Positives = 272/777 (35%), Gaps = 109/777 (14%) Query: 53 IKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRK-------KAYGQFEPPALYDH 105 ++T + + I A L++ + + LA RL F +R+ + F Sbjct: 11 VQTVNAIDAAI-AELKLMAGHSHEANVLAGRLLHFKMREVCTQTVAQFLDAFSSVLDEGL 69 Query: 106 VVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEI 165 + + + +++ Y F + Y A + Y+++N V Sbjct: 70 CAFIGNYSQSLDEMVQRYVSGGFAAVKEN---------GYLAAARFYDTYVLRNDVK--- 117 Query: 166 YESAQFLYILVAA----------CLFSNYPR---------ETRLQYVKRFYDAVSTFKIS 206 YES +++ ++A CLF E + + F++ +++ ++ Sbjct: 118 YESVPHMFMRISAFCAYHCIQNECLFKTLKHMELDRGNVVENAMDLITYFFEMIASQQVC 177 Query: 207 LPTPIMSGVRTPTRQFSSCVLIECG-DSLD-SINATSSAIVKYVSQRAGIGINAGRIRAL 264 TP+M SSC + DS + +++A S + K ++ ++G+G++ Sbjct: 178 CATPVMRSAGLRDANLSSCFIFAPALDSEEKTVDAVFSELTKLLACKSGVGMDLSTY--- 234 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 G+ H K + + +R + + +WH + L K Sbjct: 235 ----SHGKNLH----AVLKALDGQITYFNDHNIRPVSVAAYMEIWHTNIMDFLTAKLPEN 286 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGE--DITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 E R ++ GV I ++ + + LF P L + + F Y Sbjct: 287 PE--RCGNLFQGVCIPEIFFRTYKNDPESNWYLFDPKKAEVLTNTY---GYMFSIAYAGL 341 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD---PAIAPVRQSNLC 439 + + + V + ++ TG YI N N H + + +NLC Sbjct: 342 VEQGAY-EAVVPIKSVMFALVSCIIKTGGPYILNKKAINRHDWHEWSTHQYRAINCANLC 400 Query: 440 LE-IALPTKPLNDVNDENGEIALCTLS-------AFNLGAINNL--DELEELAILAVRAL 489 E I P + ++ N N + C + L + LE AV + Sbjct: 401 AEVIQYPGENVSTCNLANICLPKCLEDDKFVSGKSCLLTYEREFSIERLERATEAAVFII 460 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 +A + P A+RG R++GIGV A A G Y D + L K E + + Sbjct: 461 NACIHGGTLPTQRARRG-QSDRSMGIGVQGLADTFAMMGLGYFDAGSEILDQKIAETLYF 519 Query: 550 YLLKASNELAKE-QG-ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 L S K +G + ++ ++ G+L + + +WE L S + Sbjct: 520 NALNTSINFVKIGKGEPYANYEQSKHSIGVLHWHDWDMCSPMVY---TRDEWEDLARSCE 576 Query: 608 THGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKA-SKDGILRQVVPDYEHLHD-- 664 HG+ NS A MP+ + QI+ ++ P +S K +K+ ILR + + D Sbjct: 577 VHGVYNSQFVAYMPTAGTGQITGYSDSFYPFYSSMSSKVSNKEEILRPNMTLMSRMSDSE 636 Query: 665 ---AYELLWEMPG------NDGYLQLVG-------------IMQKFIDQSISANTNYDPS 702 E W++ + L + FIDQS S + Sbjct: 637 VQTLRECNWDIAKLPEPLLQKYRIFLSAFDYEPSLYVRRAMLRAPFIDQSQSMTLFLNED 696 Query: 703 RFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 S + L+ ++ G+KT +YY R A + + V + A Sbjct: 697 YASS----ASNIKNLLMYGWECGLKTLMYYCRIRKTATSNEFECVRRNSQQKYVNCA 749 >UniRef50_B9LSK3 Ribonucleoside-diphosphate reductase n=9 Tax=root RepID=B9LSK3_HALLT Length = 1056 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 116/675 (17%), Positives = 208/675 (30%), Gaps = 158/675 (23%) Query: 186 RETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIV 245 RE RF D + + +P + +Q S+C + D + I+ T+ Sbjct: 138 REHVEATADRFRDGMESLSFMPNSPTLMNAGDELQQLSACFVDSPADDITDIHQTAKEAA 197 Query: 246 KYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLF 305 + G+G ++R G + +G I F + F ++ +QGG R GA Sbjct: 198 EVFQSGGGMGYAFWKLRPYGDAVGSTGGIASGPITFMRTFDQMCETIAQGGARRGAQMGV 257 Query: 306 YPMWHLEVESLLVLKNNRGVEGNRVR---------------------------------- 331 + H +V + KN + +R Sbjct: 258 MRVSHPDVIQFIHSKNKDVSLAHSLRLNDPDDFTHNSFADALEEARELIDEDGKVPEHLR 317 Query: 332 --------HMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE 383 + + V + L E+ T +P + E + +Y + Sbjct: 318 NAVEGHLSNFNISVGVTDDFMEALYNDEEFTFTNPR-----TEEPHIATPETKEIYDMFG 372 Query: 384 KDDSIRKQRV---KAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP---VRQSN 437 + + V A EL+ M++ G + ++ N FD P + +N Sbjct: 373 LGEHVEVGEVLSIPADELWDDMIEGAHENGEPGVIYLERVNKEHSFDTKEHPDHRILATN 432 Query: 438 LCLEIALPTKPLNDVNDENGEIALCTLSAFNLG--------------------------- 470 C E L E C L NL Sbjct: 433 PCGEQPL------------EEYEACNLGHINLSTLAAQDAPDWRVWSDEHADEYDTEEAA 480 Query: 471 ------AINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYL 524 + +E +E R L+ ++ D+P+ ++ R +G+GV+ A Sbjct: 481 MSAFLEEAIDFEEFDERIDYGTRFLENVVTMSDFPVEKIEQKVRDMRKIGLGVMGLAQLY 540 Query: 525 AKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYK 584 + G +Y N + + I + + S+ELA E+G + E+ YA D ++ Sbjct: 541 IQLGIQYGTEPGNEVARQLMTHINHASKQTSHELATERGTFNDWEESKYANPTEYRDWFE 600 Query: 585 KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSI 644 A+E WE +RN + + P+ T+S I N T G EP Sbjct: 601 HYTGLDADE-----WED------GFPIRNHNTTTIAPTGTTSMIGNTTGGCEPIYNVAYY 649 Query: 645 KASKDGI----------------LRQVVPDYEHLH---------------DAYELLWEMP 673 K D + L + D + + D E + + Sbjct: 650 KNVSDDVQGDEMLVEFDDYFLRTLEENDVDVDAVKQEAQEQMATNEFDGVDGLETVPDAI 709 Query: 674 GN----------DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYK 723 G + + Q+ +D +IS N+ +++ + Y Sbjct: 710 GELFVVTGDLSGKQHASVQCACQEGVDSAISKTCNFP------NDATAEEMEEVYRYIYD 763 Query: 724 FGVK--TLYYQNTRD 736 G K T+Y TR Sbjct: 764 HGGKGVTVYRDGTRS 778 >UniRef50_Q3KSU5 Ribonucleoside-diphosphate reductase large subunit n=5 Tax=Lymphocryptovirus RepID=RIR1_EBVG Length = 826 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 159/772 (20%), Positives = 270/772 (34%), Gaps = 123/772 (15%) Query: 58 IHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDN 117 I E +KA AD P+ LA RL R KA A Y +++ YD Sbjct: 16 IDELKVKANAD------PEADVLAGRLLH---RLKAESVTHTVAEY---LEVFSDKFYDE 63 Query: 118 HLLEDYTEEEFKQMDTFID---HDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYI 174 + + +E ++ F ++R ++ Y + + YL R + ES Q Y+ Sbjct: 64 EFFQMHRDELETRVSAFAQSPAYERIVSSGYLSALRYYDTYLYVGRSGKQ--ESVQHFYM 121 Query: 175 LVA--------------ACLFSNYPR-ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPT 219 +A A L P E+ ++ +++ +++ + TP M Sbjct: 122 RLAGFCASTTCLYAGLRAALQRARPEIESDMEVFDYYFEHLTSQTVCCSTPFMRFAGVEN 181 Query: 220 RQFSSCVLIECGDS--LDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTG 277 +SC+L S D A + +Y+ QRAG+G+ G I Sbjct: 182 STLASCILTTPDLSSEWDVTQALYRHLGRYLFQRAGVGVGVTGAGQDGKHIS-------- 233 Query: 278 CIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGV 337 + + V+ + G R + + WH ++ L K E R + G+ Sbjct: 234 --LLMRMINSHVEYHNYGCKRPVSVAAYMEPWHSQIFKFLETKLPENHE--RCPGIFTGL 289 Query: 338 QINKLMYTRLLK--GEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKA 395 + +L + D LF P D L + EEFER Y + RV Sbjct: 290 FVPELFFKLFRDTPWSDWYLFDPKDAGDLERLY---GEEFEREYYRLVTAGKF-CGRVSI 345 Query: 396 VELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKP-LNDVND 454 L ++ G +I + CN H D + +NLC E+ P++ + N Sbjct: 346 KSLMFSIVNCAVKAGSPFILLKEACNAHFWRDLQGEAMNAANLCAEVLQPSRKSVATCNL 405 Query: 455 ENGEIALC----TLS--------------------AFNL---GAINNLDELEEL--AILA 485 N + C L+ + L GAI + L L A Sbjct: 406 ANICLPRCLVNAPLAVRAQRADTQGDELLLALPRLSVTLPGEGAIGDGFSLARLRDATQC 465 Query: 486 VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFE 545 + A Q P ++ A ++G+GV A A G +Y+D + +L + FE Sbjct: 466 ATFVVACSILQGSPTYDSRDMA----SMGLGVQGLADVFADLGWQYTDPPSRSLNKEIFE 521 Query: 546 AIQYYLLKASNELA-KEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRE 604 + + L S+ + + P F ++ YA G + +I E W L E Sbjct: 522 HMYFTALCTSSLIGLHTRKIFPGFKQSKYAGGWFHWHDWAGTDLSIPREI----WSRLSE 577 Query: 605 SIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS-KDGILRQVVPDYEHLH 663 I GL NS ALMP+ +Q++ ++ P S K + K+ LR + H+ Sbjct: 578 RIVRDGLFNSQFIALMPTSGCAQVTGCSDAFYPFYANASTKVTNKEEALRPNRSFWRHVR 637 Query: 664 DA-------------------------YELLWEMPGNDGYLQLVGIMQKFIDQSISANTN 698 ++ ++ + +Q+ F+DQS S + Sbjct: 638 LDDREALNLVGGRVSCLPEALRQRYLRFQTAFDY-NQEDLIQMSRDRAPFVDQSQSHSLF 696 Query: 699 YDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSI 749 L L+ +Y+ G+KT +YY A+ + S Sbjct: 697 LREE----DAARASTLANLLVRSYELGLKTIMYYCRIEKAADLGVMECKASA 744 >UniRef50_D0J9D2 Ribonucleoside-diphosphate reductase n=2 Tax=Blattabacterium RepID=D0J9D2_BLASP Length = 571 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 134/630 (21%), Positives = 226/630 (35%), Gaps = 145/630 (23%) Query: 148 VKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISL 207 + ++G YL+ E+ Y ++ + + K+F++ + + Sbjct: 28 LTTIKGGYLLDG-------ETPFEAYKRLSENAAKILKK---PKIEKKFFNILWKGWLIP 77 Query: 208 PTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSP 267 TP+M + T SC GDS+ I + + G + IR++GSP Sbjct: 78 STPVMVNLGTEKGLPISCFSGRVGDSMYEIYRKNLEMAILSKHGGGTSYDFSLIRSVGSP 137 Query: 268 IR-GGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVE 326 I+ G G IPF K + +A+ + QG R GA ++ + H E L ++ +G Sbjct: 138 IKNGTLGTSDGIIPFVKSYDSAIIASKQGSTRRGAVAIYLNIEHQEYPEFLKIREPKGDI 197 Query: 327 GNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDD 386 + ++ GV ++ ++L Sbjct: 198 NRQCHNVHQGVILSNSFMEKVL-------------------------------------- 219 Query: 387 SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP--FDPAIAPVRQSNLCLEIAL 444 K+ K L+ ++ER TG Y+ D+ N + P + + SNLC EI L Sbjct: 220 ---KKNGKERSLWINTLKERVKTGEPYLFFKDNANRNLPENWKKNGLKIHHSNLCSEIML 276 Query: 445 PTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLD------YQDY 498 PT + + +C LS+ NL + + A+ LDA+L Sbjct: 277 PTDESHTL--------VCCLSSLNLYKYVEWKD-TQTVFYAILFLDAVLQEFINKGKNIK 327 Query: 499 PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNEL 558 I A R A R LG+G + + YL + + LTH F I+ KA+ L Sbjct: 328 GIEDAVRFAEKSRALGLGALGWHSYLQSEMIPFISVKSEILTHDIFGKIRSESQKATQYL 387 Query: 559 AKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSA 618 AKE G E+ + G G RN TL A Sbjct: 388 AKEYG------ESEWNIGT--------------------------------GRRNLTLMA 409 Query: 619 LMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPDYEH--LHDAYEL--LWEMP 673 + P+ +S++++ + G+EP + + G+ + P E + Y L +WE Sbjct: 410 MAPNRSSAKLAGGLSQGVEPLAANIYVDDDAKGMHIRKNPYLEKILIKSGYNLPEVWEQI 469 Query: 674 GND---------------------------GYLQLVGIMQKFIDQSISANTNYDPSRFPS 706 N+ ++ I QK+IDQ S N + Sbjct: 470 ANEKGSCLGLTGLSEKEKNVFLCFKEINQLELIKQASIRQKYIDQGQSINLAFH------ 523 Query: 707 GKVPMQQLLKDLLTAYKFGVKTLYYQNTRD 736 P + + K L A+K G+K+LYY + Sbjct: 524 QNTPAKFINKVHLEAWKIGLKSLYYYRSES 553 >UniRef50_Q196Z5 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR1_IIV3 Length = 630 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 142/698 (20%), Positives = 241/698 (34%), Gaps = 147/698 (21%) Query: 135 IDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVK 194 ID R+ F +++L+ Y+ ++ S Q + +A ++ + Sbjct: 4 IDESRNNLFDALGLQRLKDSYMKEDES------SPQERFAFIARQFCADDEP-----LAQ 52 Query: 195 RFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGI 254 R YD +S +S +P +S RT +C L D+ + T + + + Sbjct: 53 RLYDYMSQHWLSPSSPQLSFGRTKQGLPIACFLPYLHDTARGLIDTWAEVSELSMIG--- 109 Query: 255 GINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVE 314 LG IR + G IP + + + + QG R G+ + + H E+ Sbjct: 110 -----GGIGLGVGIRQPDEKSVGIIPHLRTYDASCTAYKQGQTRRGSYAAYLDISHPEIL 164 Query: 315 SLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRL--------------------------- 347 S L + G ++ ++ GV + ++ Sbjct: 165 SFLNTRRVGGDHNYKLLNLHNGVNVPDSFMKKIWILSTLAPFVKMDPCPTTETLFKKAVT 224 Query: 348 -LKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQER 406 LK + + A A+Q + + + K+ +KA EL+ ++ R Sbjct: 225 TLKDSRYFGADDRWLGEVSFAALAEQLDVVNRWDLIDPHTGKVKETIKATELWERIILTR 284 Query: 407 ASTGRIYIQNVDHCNTHSP-FDPAIA-PVRQSNLCLEIALPTKPLNDVNDENGEIALCTL 464 A TG YI +D N P F + +RQSNLC E+ LPT A+C L Sbjct: 285 AETGEPYIHWIDTSNRALPQFQKNLGLSIRQSNLCSEVVLPTDETR--------TAVCCL 336 Query: 465 SAFNLGAINNLDELEELAILAVRALDAL----LDYQDYPIPAAKRGAMGRRTLGIGVINF 520 ++ NL + E+ + LD + +D+ + A A R +GIG + F Sbjct: 337 ASLNLDYFDKWCNNEQFYLDVATYLDNVLQYFIDHAPPTLKRAVHSARSERAIGIGALGF 396 Query: 521 AYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPI 580 YL A + K F+ I +L + + EL + +G P T Sbjct: 397 HSYLQSKMVDIESLPAYLINKKIFKTISSHLERVNLELGELRGEAPDCVGT--------- 447 Query: 581 DTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISN-ATNGIEPPR 639 G R S ++A+ P+ TSS I + EP R Sbjct: 448 -----------------------------GRRFSHMTAIAPNATSSIIMGNTSPSCEPFR 478 Query: 640 GYVSIKASKDGILRQVVPDYEHL-------HDAYELLW-EMPGNDGYLQ----------- 680 + + + G + L + A E +W + +DG +Q Sbjct: 479 ANIYKQDTISGSFVTYNKHLKRLLEERIPDNQARERVWSSIKMHDGSVQHLNQLTVQEKK 538 Query: 681 ---------------LVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFG 725 L QK+IDQS S + ++P + + K L A+ G Sbjct: 539 VFKTWPEINQLSLVMLAADRQKWIDQSQSTSLFFNPDE------RISYVHKIHLKAWLHG 592 Query: 726 VKTLYYQNTR-----DGAEDAQDDLVPSIQDD--GCES 756 +KTLYY +R D P ++D CE Sbjct: 593 LKTLYYFRSRKILTVDKVHHTTTTADPKTENDCTFCEG 630 >UniRef50_B2UIU6 Ribonucleoside-diphosphate reductase n=3 Tax=Ralstonia RepID=B2UIU6_RALPJ Length = 605 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 110/633 (17%), Positives = 202/633 (31%), Gaps = 72/633 (11%) Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPT 209 L +YL + ++ VA L + + R + + FY + I Sbjct: 19 VLADRYLAPGET------TCNDVFKRVAHALAAAEQPDQRAHFTRLFYANLLQGAIG-AG 71 Query: 210 PIMSGVRTP-TRQFSSCVLIECGDSLDSINAT------SSAIVKYVSQRAGIGINAGRIR 262 IM+ + +C + G S S+ A + + G+G + I Sbjct: 72 RIMANAGSANHGTMVNCFVHPIGASEQSVADASDVERALHAAQRTLQMGGGVGYDFSVIA 131 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 + + F + + RGGA H ++ + + K Sbjct: 132 PADAEQATSNSGTGSVCAVLDSFDRVCATQALVNTRGGAQMAVLRCDHPDLATFITAKRG 191 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 R + V + + L A Sbjct: 192 ----RRRWATFNLSVAVTDAFMRAVADDGLWCL---QHRAVPNAQRLATGA-------HA 237 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEI 442 + V A +L++++ + + + +D N + I + +N C E Sbjct: 238 LSNGKWCYAVVPARQLWNMIAEAAHHSAEPGLLFIDTINAANDL-AEIETIAATNPCGEQ 296 Query: 443 ALPTKPLNDVNDENGEIALCTLSAFNLGA--INNLDELEELAILAVRALDALLDYQDYPI 500 LP P +++ F +G + + L + VR LD ++ +P+ Sbjct: 297 PLP--PWGSCVLGPIDVSRWVQWPFGMGGQPLFDFVGLSRAVRVQVRMLDNAIEITRWPL 354 Query: 501 PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAK 560 P A +R +G+GV A L Y +A + ++ AS LA Sbjct: 355 PEHMHEAQAKRRIGVGVTGLADALTMMCLPYDAPAARCFAAQIGRCLRDSAYAASAALAC 414 Query: 561 EQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALM 620 E+G P F+ L + L +A+ E++ HGLRNS L +L Sbjct: 415 ERGPYPLFSPERS----LAPGHFSAALP-----------KAVCEAVAKHGLRNSHLLSLA 459 Query: 621 PSETSSQISN--ATNGIEPPRGYVSIKASKDG---------------ILRQVVPDYEHLH 663 P+ + S ++GIEP +V + + + R + L Sbjct: 460 PTGSVSLAFGDNCSSGIEPAFDWVYQRRVRIQHRAPQLYRTENRAYRLFRALYGQRAALP 519 Query: 664 DAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYK 723 + ++ G D +L++V +Q F+D SIS S Q+ L A++ Sbjct: 520 GYFVTARQIDGLD-HLRMVATLQPFVDASISKTVLLPCS------ASCAQVAALLFHAWQ 572 Query: 724 FGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCES 756 +K + G +D +L P C Sbjct: 573 LRLKGITIFRPDTGPDDVLSELPPLNGRLTCFC 605 >UniRef50_C9LXZ2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Veillonellaceae RepID=C9LXZ2_9FIRM Length = 749 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 117/630 (18%), Positives = 198/630 (31%), Gaps = 113/630 (17%) Query: 144 SYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTF 203 + L+ KY VA +FS RE + + Sbjct: 7 TEIGRSILQAKYYHAGETE------PHEFIERVA-GIFSPEVRE-------KMRAYLEDG 52 Query: 204 KISLPTPIMSGVRTP---TRQFSSCVLIECG-DSLDSINATSSAIVKYVSQRAGIGINAG 259 +S + S+C ++ D ++SI + I K S GIG+N Sbjct: 53 ALSPAGRTLYAAGAKGKFKSSLSNCYIMPSPTDDIESIFTVNQQIAKIFSYGGGIGVNIS 112 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 +R S + TG + F K F T + SQ G R GA + H ++ L + Sbjct: 113 GLRPKDSRVNNVARSSTGAVSFLKIFNTTGEVISQNG-RRGAMLVALDSEHPDIYEFLHM 171 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 K E ++ M+ + + ++ + L Sbjct: 172 KQ----ENEKLASMNLSILFSDAFMQAVIDDAEYELTF---------------------- 205 Query: 380 TKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP-AIAPVRQSNL 438 E ++ ++A E F Q + G D N ++ + +N Sbjct: 206 -DVEATGEKIRRTIRAAEFFDEYCQTQWDWGDPGALFKDRLNDYTLLSGYDEYKIEVTNP 264 Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN----------LDELEELAILAVRA 488 C E C L + NL + +E AVRA Sbjct: 265 CGEFGGNA------------YNSCNLMSLNLYSFIEDKFGDAPHIAEEEFRAAIQTAVRA 312 Query: 489 LDALLDYQD--YPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA 546 LD +LDY P+ ++ R++G+G+ A Y + + Sbjct: 313 LDEVLDYGFDTQPLEENRQCIRDWRSVGLGLFGVADAFVAMKLAYGSRESCDFIQGVLRT 372 Query: 547 IQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESI 606 + + S LAKE+GA ++ K L ++ + A I Sbjct: 373 MFTEAARTSAALAKEKGAFGKYDWEKTKKSPLIQRLAEEAPEVYA-------------EI 419 Query: 607 KTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKAS-----KDGILRQVVPDYE 660 K +GLRN TL ++ P+ T S + + G EP + + G R Sbjct: 420 KEYGLRNGTLLSIAPTGTISLLMGVFSGGCEPLYQISYERTTHKMEEGSGSFRVYAHSVS 479 Query: 661 HLHDAYELLWEMPGND-----------------GYLQLVGIMQKFIDQSISANTNYDPSR 703 L D ++L ++ D ++L MQK++D SIS+ N + Sbjct: 480 DLLDYHKLPHDLTNEDIKKRFPWVIESHDVPYLHRVELQAAMQKYVDNSISSTVNLKHAA 539 Query: 704 FPSGKVPMQQLLKDLLTAYKFGVKTLYYQN 733 P + L A+K K + Sbjct: 540 TP------ADIRNIYLAAWKSRCKGITVFR 563 >UniRef50_Q6MNP6 Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Bdellovibrio bacteriovorus RepID=NRDJ_BDEBA Length = 764 Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats. Identities = 113/709 (15%), Positives = 223/709 (31%), Gaps = 128/709 (18%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYES-AQFLYILVAACLFSNY--------PRETRLQYV 193 +S A+ KY + V +E+ + + V + ++ R+ + Sbjct: 52 WSQLAIDIAASKYFRKVGVPKTGHETSVRQMVDRVVKAIVASAIRQGGYFATRKEADIFA 111 Query: 194 KRFYDAVSTFKISLPTPIMSGVRT-----------------------------PTRQFSS 224 K + + + + +P+ Q S+ Sbjct: 112 KELKFILLSQRGAFNSPVWFNAGLWEAYKAQSPSEHFAWDEKKKSIQATKNAYERPQCSA 171 Query: 225 CVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKH 284 C + DS++SI + K +G G N +IR+ G +G I F + Sbjct: 172 CFIQSVDDSIESIFDLAKTEAKLFKYGSGTGSNFSKIRSKYEA-TGSGGKSSGLISFLEV 230 Query: 285 FQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLM 343 + GG R A + + H EV + K + H+ ++ Sbjct: 231 LDKGAGAIKSGGTTRRAAKMVVVDIDHPEVLDFIDWKMREEQKA----HLLIAAGLSADF 286 Query: 344 YTRLLKGEDITLF---SPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFS 400 +GE + ++ + DAF E+ ER + + + + A E+++ Sbjct: 287 -----EGEAYRTVSGQNANNSVRVSDAFMKAVEQ-ERPWKLKARLTGKVLREIPAGEVWN 340 Query: 401 LMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIA 460 + + IQ D N P + SN C E + + Sbjct: 341 RITRAAWMCADPGIQFHDTINKWHTC-PETDIIHSSNPCSEYMF------------LDDS 387 Query: 461 LCTLSAFNLGAI------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLG 514 C L++ NL + + A A + L+DY YP + + R LG Sbjct: 388 ACNLASINLVKFLNDTGDFDFESFIHTARTLFVAQEILVDYSSYPTQRVAQNSHDYRPLG 447 Query: 515 IGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNE-TTY 573 +G N L + G Y + S+E+A+ +G + + + Sbjct: 448 LGFANLGSLLMRKGVAYDSDEGRAWAGALTSLMSGVAYLTSSEMARAKGPFAGYRKNSKS 507 Query: 574 AKGILPIDTYKKDLDTIANEPLHYD------WEALRESIKTHGLRNSTLSALMPSETSSQ 627 ++ + + P D W+ + + + +G RN+ + + P+ T Sbjct: 508 MLKVMKMHERALNQVAWKMLPAGIDKAVRNLWKGVLYNGEKYGYRNAQATVIAPTGTIGL 567 Query: 628 ISNA-TNGIEPPRGYVSIKASKDGILRQVVPD---------------------------- 658 + + T GIEP + K G Q+V Sbjct: 568 LMDCDTTGIEPDFSLIKFKKLVGGGEIQIVNQSVDAALASLQYFEDERQAILKYVEENNS 627 Query: 659 -----YEHLHDA--YELLWEMPGN-----DGYLQLVGIMQKFIDQSISANTNYDPSRFPS 706 H D ++ MPG + +++++ +Q FI +IS N Sbjct: 628 VVGAPQMHPEDLPVFDTATAMPGQRVLSPESHVKMMAAVQPFISGAISKTVNMP------ 681 Query: 707 GKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDG 753 + + + A+K GVK +Y ++ + +++ G Sbjct: 682 STATEEDISRIYFLAWKLGVKAVAVYRDGSKQSQPLNLKEKPKVVEEVG 730 >UniRef50_C9M6M1 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6M1_9BACT Length = 881 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 121/724 (16%), Positives = 219/724 (30%), Gaps = 169/724 (23%) Query: 144 SYAAVKQLEGKYLVQNRVTGEIYESAQ----FLYILVAACLFS---NYPRETRLQYV--- 193 S A L +Y + + + V+ L + Y E+ + ++ Sbjct: 43 SENARWLLAQRYCLDRWDDELKACRPERGIEEVARRVSRVLAASETAYAPESEIGWIRTL 102 Query: 194 -KRFYDAVSTFKISLPTPIMSGVR--------------------------------TPTR 220 K + + F+ +P + G T + Sbjct: 103 EKNLFSDILNFQFLFNSPCLYGCGAGLTVQPQWSRIIYCSPDELSWEDYRRLAEGRTANQ 162 Query: 221 QFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRG-GEAFHTGCI 279 Q +C ++ DS++ I G+G N G +R G+PI+G +G + Sbjct: 163 QLFACFVVSVPDSIEGIFDAVKDAAIISKYGGGVGANFGHLRESGAPIKGGTGGKASGPV 222 Query: 280 PFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQI 339 F + + T QGG R A P H ++E + K G R+ + + V + Sbjct: 223 SFMETWNTMGSVVVQGGRRRAALMGMLPDNHPDIERFMDAKTEDG----RLPYFNISVCV 278 Query: 340 NKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELF 399 + + +G D L S + D V A +L+ Sbjct: 279 SDRLVNAAREGGDFPLVS--------------------------RVDGKTAATVPAAQLW 312 Query: 400 SLMMQERASTGRIYIQNVDHCNTHSPF-DPAIAPVRQSNLCLEIALPTKPLNDVNDENGE 458 + G + +D + + + +N C E LP Sbjct: 313 DKLCSNAWRRGDPGVFFIDRAGADNLLREDPEFVIESTNPCGEQPLPN------------ 360 Query: 459 IALCTLSAFNLGAINNLDELEELAILAVRA----------LDALLDYQDYPIPAAKRGAM 508 C L + NL A D +LA R LD ++D YP+ R Sbjct: 361 YTSCNLGSINLSAFVAPDGSGQLAFDEARFVDQVYRSMVYLDLVIDSCSYPLERIGRRTR 420 Query: 509 GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWF 568 R +G+G++ + G Y + + + L A+ + G P+ Sbjct: 421 QIRPVGLGLMGLSDAAIASGLVYGSPEFSGFCDRLASVMAVCALLATVDSVDHLGKEPFA 480 Query: 569 NETTYAKGILPI-DTYKKDLDTIANEPLHYDWEALRE--SIKTHG--------------- 610 + K P+ D DL + LR +K G Sbjct: 481 ASSAVVKLFAPLRDELGGDLFMSQTMETLDEEGFLRVVGRMKELGLPYTLCNTLQAAPGV 540 Query: 611 -----------------------LRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS 647 +RNS ++ P+ + S + +A+ GIEP + + Sbjct: 541 LKRLEGGSPEELRRLLGAVLGGRMRNSRRLSIAPTGSISMLLDASAGIEPNFAWSWNRKV 600 Query: 648 K--DGILRQVVPDYEHL----------------HDAYELLWEMPGNDGYLQLVGIMQKFI 689 DG + + L + +++ +G++++ GI +++ Sbjct: 601 MKSDGNGYETRQYFHRLVTDEGKRQLSAGGKLEDPRFVTAYDL-SPEGHVEVTGIFARYV 659 Query: 690 DQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVP 747 D IS N S + + Y G K T+Y RDG+ Q V Sbjct: 660 DSGISKTVNLPSS------ATVDDVKAVYERCYDLGCKGITIY----RDGSRSEQPIEVS 709 Query: 748 SIQD 751 + Sbjct: 710 KPAE 713 >UniRef50_B6YRR4 Ribonucleoside-diphosphate reductase n=21 Tax=root RepID=B6YRR4_AZOPC Length = 867 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 134/683 (19%), Positives = 228/683 (33%), Gaps = 149/683 (21%) Query: 144 SYAAVKQLEGKYLVQNRVTGEIYE-SAQFLYILVAACLFSNYPRETRLQYVKR-FYDAVS 201 A K KY +++ GE +E + ++ +A + + ++ + +S Sbjct: 17 DELAAKVFVDKYALKSN-KGEYFESTPNEMHQRIAREIVRIEQKYPNPILTEKNILEVIS 75 Query: 202 TF-KISLPTPIMSGVRTP--TRQFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGIN 257 F + M G+ S+C +I DS I T ++ + +R G+G + Sbjct: 76 DFNYLIPQGGNMFGIGNSYQLTSLSNCFVIGNRTDSYGGIMRTDEEQIQLMKRRGGVGHD 135 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 IR GSP+ TG +PF + + + + +Q G R GA L + H E+ES + Sbjct: 136 LSHIRPRGSPVNNSAITSTGMVPFMERYSNSTREVAQEG-RRGALMLSMSVEHPEIESFI 194 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFER 377 K +E +V + V++ + P D Sbjct: 195 DAK----IEEGKVTGANISVKLTDEFMRAVESNRSFIQRFPIDS---------------- 234 Query: 378 LYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS----PFDPAIAPV 433 ++ I K + A +L++ ++ + + D S D V Sbjct: 235 ------ENPQIIK-EIDAKDLWNKIIHNAWQSAEPGVLFWDTILRESIPDCYIDSGFGTV 287 Query: 434 RQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL----------GAINNLDELEELAI 483 +N C EI PL + C L A NL A + D EE Sbjct: 288 -STNPCGEI-----PLCPYDS-------CRLLAINLYSYVKQPFKKEAEFDFDLFEEHVA 334 Query: 484 LAVRALDALLD-------------YQDYPIPAAKRGAMGR-----------RTLGIGVIN 519 LA R +D ++D DY K R +GIG+ Sbjct: 335 LAQRMMDNIVDLEVEKIDAILMKIISDYESDEIKHTEQLLWEKIRHKTLIGRRIGIGITA 394 Query: 520 FAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILP 579 LA G RY A N + + + + +AS E+AKE+GA FN Sbjct: 395 EGDMLAALGFRYGTEEATNFAERIQKVLALSVYRASVEVAKERGAFEIFN---------- 444 Query: 580 IDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPR 639 + + + L L E ++ G RN + P+ T+S +S T+GIEP Sbjct: 445 ---IELEKNNPFIHRLKEVDSQLIEDMQQFGRRNIACLTIAPTGTTSLMSQTTSGIEPVF 501 Query: 640 GYVSIKASK----DGILRQVVPDYEHLHDAYELLWEMPGNDGY----------------- 678 V + K D I + D ++ Sbjct: 502 LPVYKRRRKVNPSDEITKIDFVDEMGDSWVEYTVFHHKFVKWMEVQGYPTTRKYAQREID 561 Query: 679 ---------------------LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKD 717 +++ G +Q+++D SIS N + + + Sbjct: 562 ALVAKSPYYKSTSNDVDWLQKVKMQGRIQRWVDHSISVTINLP------NETKEELVNYL 615 Query: 718 LLTAYKFGVK--TLYYQNTRDGA 738 + A+K G K T+Y +R+G Sbjct: 616 YIEAWKSGCKGCTVYRDGSRNGV 638 >UniRef50_C8WXT6 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WXT6_ALIAD Length = 1065 Score = 358 bits (918), Expect = 5e-97, Method: Composition-based stats. Identities = 105/586 (17%), Positives = 188/586 (32%), Gaps = 121/586 (20%) Query: 226 VLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHF 285 + GDS +I T + + + + + +R S +RG +G + + Sbjct: 309 FCLSPGDSRSTIARTLGDMWEAMRDGKRVSLVLSSLRPRYSYVRGVNGRSSGAYSWGLLY 368 Query: 286 QTA--------------------VKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGV 325 + QGG R GA L H ++ + K GV Sbjct: 369 DKGNQVFGEGFGPVGVGEIMSVGCQLTLQGGSRRGALMLILNDRHADLPKFIRAKQVDGV 428 Query: 326 EGNRVRHMDYGVQINKLMYTRLLKGEDITL--FSPSDVPGLYDAFFADQEEFERLYTKYE 383 + + V +++ +GE L PS F EE + Sbjct: 429 ----ITGANISVGVSEEFMQAKRRGESWQLGFVPPSHREAFDGDFGRWLEEGK------- 477 Query: 384 KDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIA 443 + + A +L+ + + + + + N S P+ +N C E Sbjct: 478 --PFEVTETISAAKLWRDICESAWKSAEPGVVFLGRANAMSN-SWYFNPLVATNPCGEQP 534 Query: 444 LPTKPLNDVNDENGEIALCTLSAFNLGAINN----------------------------- 474 LP +C L A L N Sbjct: 535 LPP------------YGICNLGAVVLARFANGFRDSGVRTEFSDPEREAYVRSLLLEKFP 582 Query: 475 ------------LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAY 522 +ELE +R DA++D YP ++ M R +G+G++ Sbjct: 583 ADEAEFLLHHIRWEELELTTRRGIRFQDAVIDATYYPFEENRQNQMSERRVGLGIMGLHD 642 Query: 523 YLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDT 582 + G RY + L + + S ELAKE G P F+ + + Sbjct: 643 LMLYCGIRYGSEESVKLIDVLMGLMAEWAYLESVELAKEYGPFPKFDAEKFLQSGFMRHM 702 Query: 583 YKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYV 642 + + E+I+ HG+RN T + P+ T+ + + G EP + Sbjct: 703 AAERP-------------HVVEAIRKHGVRNVTTMTIAPTGTTGTMVGCSTGCEPYYAWS 749 Query: 643 SIKASKDGILRQVV----------PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQS 692 + S+ G+ + P E L + E+ + ++++ +Q++ID S Sbjct: 750 YFRNSRLGLFEEHAAIVEQYRREHPSEESLPPYFVTAMEL-TPEEHVRVQAALQRWIDSS 808 Query: 693 ISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 IS N S ++ +K AY+ G K T+Y +R Sbjct: 809 ISKTCNAPHS------YTVEDTVKLYDLAYELGCKGITIYRDGSRS 848 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 105/348 (30%), Gaps = 66/348 (18%) Query: 69 LISRDAPDY------QYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLED 122 ++ + DY + +A R + +RK+A V + + Y Sbjct: 10 MLDLNDDDYLGPTGEKIVADRYLLKDIRKEALAPGALV-----VAVLDKKRAYHELARVK 64 Query: 123 YTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS 182 + + Q+ + + + V L S + ++ VA + Sbjct: 65 AVDRDADQVTVELRDGSIVDLPVSQVDVLLET-------------SPRQMWRRVARGAAA 111 Query: 183 NYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFS-SCVLIE-CGDSLDSINAT 240 + + + FY+ ++ I + + T + S +C +I G L + Sbjct: 112 VTRQPEV--WEEAFYELQKGWRYVPGGRINASLGTGMQVTSYNCFVIPNVGPDLRDYAES 169 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 ++ ++ G+G+N RI G+ I + R Sbjct: 170 FGQTLEIQARSGGVGMNLSRIPPQGTLI---------PVS--------------TASRKA 206 Query: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 L WH ++ L + + R + + + ++ P Sbjct: 207 ELMLVLDAWHPDLVDFLETEYPHSTKLVRAD---------AAFWRAVEEDDEWVFRFPDT 257 Query: 361 VPGLYD-AFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERA 407 YD + D + + R E+ R++A EL ++ A Sbjct: 258 SVEGYDEKWAGDLDAWLRQGLPVEEHG-----RIRARELMEKILASDA 300 >UniRef50_D2RTR9 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Halobacteriaceae RepID=D2RTR9_9EURY Length = 1042 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 109/693 (15%), Positives = 212/693 (30%), Gaps = 160/693 (23%) Query: 183 NYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSS 242 + R + F + +P + +Q S+C + D +D I+ T+ Sbjct: 135 DEIRAHVEDVAEEFQGMMENLDFMPNSPTLMNAGDELQQLSACFVDSPDDDIDDIHQTAK 194 Query: 243 AIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAA 302 + G+G ++R G + +G I F + + ++ +QGG R GA Sbjct: 195 EAAQVFQSGGGMGYAFWQLRPYGDAVGSTGGIASGPITFMRTYDQMCETIAQGGARRGAQ 254 Query: 303 TLFYPMWHLEVESLLVLKNNRGVEGNRVR------------------------------- 331 + H +V + KN +R Sbjct: 255 MGVMRVSHPDVIQFIHAKNKDVSLAETLRLNDPDDFTHNSFQEALDEARELIDDEGKVPK 314 Query: 332 -----------HMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 + + V I L GE+ T +P E + LY Sbjct: 315 HLRNAVEGHLSNFNISVGITDDFMEALQNGEEFTFTNPR-----TGEPHIATAETKELYD 369 Query: 381 KYEKDDSI---RKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP---VR 434 + D + + + A EL+ +++ G + ++ N FD P + Sbjct: 370 MFGLGDYVEVGEELSIPAEELWDDIVEGAHENGEPGVIYLERVNKQHSFDVEKHPDHRIL 429 Query: 435 QSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------------------- 472 +N C E L E C L NL + Sbjct: 430 ATNPCGEQPL------------EEYEACNLGHINLSTLADLEAPDWRVWYDEHGEEYDSL 477 Query: 473 -----------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFA 521 + +E + + R L+ ++ D+P+ ++ R +G+G++ A Sbjct: 478 EDAVDAFLEEAIDFEEFDRRIEMGTRFLENVVTMSDFPVEKIEQKVREMRKIGLGIMGLA 537 Query: 522 YYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPID 581 + G Y ++N + + I + AS+ELA+E+G+ ++ + YA + Sbjct: 538 QLYIQLGMEYGSETSNEVARQLMRHINHGSKWASHELAEERGSFDEWDNSKYANPTEYRE 597 Query: 582 TYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGY 641 ++K A+E WE +RN + + P+ T+S + N T G EP Sbjct: 598 WFEKQTGLDADE-----WED------GFSIRNHNTTTIAPTGTTSMVGNTTGGCEPIYNV 646 Query: 642 VSIKASKDGI------------------------------------------LRQVVPDY 659 K D + + + Sbjct: 647 AYYKNVSDDVQGDEMLVEFDDYFLRVLEDNDIDVDAVKEEAQEQMATNQFNGVEGLSTVP 706 Query: 660 EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLL 719 + + + + ++ + + + Q+ +D +IS N ++ Sbjct: 707 DAIGELFVTTGDLSAKE-HAGVQVACQQGVDSAISKTVN------APNDSTLEDAKDVFE 759 Query: 720 TAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDD 752 Y+ G K + Y RDG Q + D Sbjct: 760 YIYEHGGKGVTYY--RDGTRSKQVLTTRAKNAD 790 >UniRef50_C1XXN0 Ribonucleoside-diphosphate reductase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XXN0_9DEIN Length = 1014 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 110/618 (17%), Positives = 198/618 (32%), Gaps = 144/618 (23%) Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFY-KHF 285 ++E D + I T+ V + ++ +R G+PI+G +G + F + F Sbjct: 211 VLEVPDDMGGIIDTARDAVAMAGKGQEPHVDFSLLRPEGTPIKGSGGTSSGPVSFLLEIF 270 Query: 286 QT------------------------AVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKN 321 ++ QGG R GA + H ++ L K+ Sbjct: 271 DNFLEWGNLGAEKSGPVATLRYVYSPVLRVVRQGGTRRGAGMATLSIDHPDLLDFLTAKD 330 Query: 322 -NRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 +R + + + + + + L P++VPG Y + E L Sbjct: 331 LDREAAEGDISTFNISILVTEAFWNTLQADGLWA-VEPAEVPGKYYPYLVQGEYTGALPE 389 Query: 381 KYEKDDS------IRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP--AIAP 432 +++ + + +V A L+ + +TG + VD N S Sbjct: 390 LPDREVDGARAIPVYEGKVPAKWLWHEIAWHAWATGEPGLIFVDRINELSALKHLGERYR 449 Query: 433 VRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------NNLDELEELAILAV 486 +R +N C EI L GE C L A NL A + + Sbjct: 450 IRATNPCGEIPL----------TVGEP--CDLGAINLAAYVREDKTFDYATFRADVRTCI 497 Query: 487 RALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA 546 R LD +LD + + + + R LG+GV+ A L K G YS K A Sbjct: 498 RFLDNVLDVNVFALEDNRIASQSLRRLGLGVMGLADALIKMGLPYSSEEGRQAVAKIMNA 557 Query: 547 IQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESI 606 ++ + AS L +E+G P + + + + + Sbjct: 558 MREEAILASERLGEERGVFPIYAQ--------HPEKFPEIRP------------------ 591 Query: 607 KTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD----------------- 649 RN + + P+ T+S + ++GIEP + Sbjct: 592 ----RRNVAVLTVAPTGTTSMLMGVSSGIEPMFSPFMWRRIGGQYKALLHPLFVEQMEKY 647 Query: 650 -------------------------GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGI 684 G +R + + +E ++P D ++++ G+ Sbjct: 648 PPTPPFEKEGAWDWDKLIEAIQAHHGSVRGIEGIPTEIQAVFEGAHDVPPLD-HVRMQGV 706 Query: 685 MQKFID------QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 +Q+ D S+S N + + + AY G K T+Y RD Sbjct: 707 VQRAFDAFGLAANSLSKTINLP------NQATVADVEAAYTEAYLTGCKGITVY----RD 756 Query: 737 GAEDAQDDLVPSIQDDGC 754 G+ D Q V + Sbjct: 757 GSRDLQVLSVSKSEKKET 774 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 55/193 (28%), Gaps = 34/193 (17%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVST 202 F A +YL G++ ++ VA + E R + + F+ +++ Sbjct: 8 FDDHAQAIARRQYL--QESDGDVL----GMFRRVADWVAGAEKPEARAYWSEEFFRLMAS 61 Query: 203 FKISLPTPIMSGVRTPTRQFSSCVLIEC----GDSLDSINATSSAIVKYVSQRAGIGINA 258 + +++G T +C + S + + + + G G+N Sbjct: 62 KRFCPGGRVLAGAGTRHGNVLNCFVQGATENDPSSFNGVLEVAKKLALVTKVGGGNGVNL 121 Query: 259 GRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLV 318 GG G R + H +V+ + Sbjct: 122 DPYPPR----HGGAGKAAGP------------------RRTVRGFAYLRADHPDVQDFIQ 159 Query: 319 --LKNNRGVEGNR 329 ++ +G + Sbjct: 160 GMMRPPINPDGEK 172 >UniRef50_Q5L9C8 Ribonucleoside-diphosphate reductase n=26 Tax=Bacteroidetes RepID=Q5L9C8_BACFN Length = 882 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 128/691 (18%), Positives = 240/691 (34%), Gaps = 128/691 (18%) Query: 139 RDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYD 198 R A + KY V++ +S + ++ +A + + ++ ++ Sbjct: 52 RYFQGDELAARVWVNKYAVKDSFGNIYEKSPKDMHWRLANEVARIEAKYPNALSSEQLFE 111 Query: 199 AVSTFKISLP--TPIMSGVRTPTR--QFSSCVLIECG---DSLDSINATSSAIVKYVSQR 251 FK +P +P M+G+ + S+C +I DS +I V+ + +R Sbjct: 112 LFDHFKYIVPQGSP-MTGIGNDYQVASLSNCFVIGIDGSADSYGAIIKIDEEQVQLMKRR 170 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 G+G + IR GSP++ TG +PF + + + + +Q G R GA L + H Sbjct: 171 GGVGHDLSHIRPKGSPVKNSALTSTGLVPFMERYSNSTREVAQDG-RRGALMLSVSIKHP 229 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFAD 371 + E+ + K G +V + V+++ + ++G T P Sbjct: 230 DSEAFIDAKMTEG----KVTGANVSVKLDDAFMSAAVEGRKYTQQYP------------- 272 Query: 372 QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD---P 428 + D + ++A L+ ++ + + D S D Sbjct: 273 ----------IDSDHPTTVKEIEASNLWKKIVHNAWKSAEPGVLFWDTIIRESVPDCYAD 322 Query: 429 AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRA 488 +N C EI P P + + ++ F A + D + LA R Sbjct: 323 LGYKTVSTNPCGEI--PLCPYDSCRLLAINLYSYVVNPFTKDAYFDFDLFHKHVALAQRI 380 Query: 489 LDALLDYQDYPIPAA----------------KRGAMGR--------RTLGIGVINFAYYL 524 +D ++D + I +RG + R G+G+ L Sbjct: 381 MDDIIDLELEKIERIIEKIDQDPENEEVKHTERGLWEKIYKKSGQGRRTGVGITAEGDML 440 Query: 525 AKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYK 584 A G RY A + K +A+ ++S ++AKE+GA ++ Sbjct: 441 AALGMRYGTEEATEFSEKVHKAVALGAYRSSVDMAKERGAFDVYDSER------------ 488 Query: 585 KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSI 644 + + N D AL E +K +G RN + P+ T+S ++ T+GIEP V Sbjct: 489 EKNNPFINRLREAD-PALYEDMKKYGRRNIACLTIAPTGTTSLMTQTTSGIEPVFLPVYK 547 Query: 645 KASKDG---------ILRQVVPDYEHL---HDAYELLWEMPGNDG--------------- 677 + K + + +E H + E G D Sbjct: 548 RRRKVNPNDTNVRVDFVDETGDAFEEYIVFHHKFVTWMEANGYDPAKRYTQEEIDELVAK 607 Query: 678 ---------------YLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAY 722 +++ G +QK++D SIS N V + + + + A+ Sbjct: 608 SPYYKATSNDVDWLMKVRMQGKIQKWVDHSISVTINLP------NDVDEELVNRLYVEAW 661 Query: 723 KFGVK--TLYYQNTRDGAEDAQDDLVPSIQD 751 K G K T+Y +R G + ++ Sbjct: 662 KSGCKGCTVYRDGSRSGVLISAKSDKDKKEE 692 >UniRef50_Q2S5T5 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5T5_SALRD Length = 894 Score = 354 bits (909), Expect = 7e-96, Method: Composition-based stats. Identities = 102/546 (18%), Positives = 188/546 (34%), Gaps = 74/546 (13%) Query: 168 SAQFLYILVAACLFSNYPRETRLQYVKRFYDAVST-------FKISLPTPIMSGVRTPTR 220 + A + + +RFY +S F + I + T Sbjct: 68 RVPDTWYRNARAMAQVEDDTD--MWTQRFYQLLSGKGLGTGPFPFTPGGRIFANAGTGLG 125 Query: 221 --QFSSCVLI----ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAF 274 +C + DS+D I A + K ++ G G A +R G+ I G + Sbjct: 126 KATLINCFVSGFQGHDQDSMDEIQAELTRQAKILASEGGYGFCAHIMRPRGARIGGVGSM 185 Query: 275 HTGCIPFYKHFQTAVKSCSQGG------------VRGGAATLFYPMWHLEVESLLVLKNN 322 G + + + G +R GA + +WH ++ + K Sbjct: 186 TPGAVQMLDVWNKQAATIVAGSGMKSDRDDVKDKIRKGAQMVTMGIWHPDIIEFIEAKQE 245 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGL------YDAFFADQEEFE 376 G R+ + V I + + L P +D +E Sbjct: 246 PG----RLHKFNMSVLITDEFMEAVKNDDTWALRFPDYENEKEFYKQHWDGNLKAYQEKG 301 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 + + +A E+++ +M + + VD N + + + + Sbjct: 302 GTVKTWTDPATGEPAVYEAREIWNRIMDSTYNRNEPGVIFVDTINKENNL-GYVEHINAT 360 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN-------LDELEELAILAVRAL 489 N C E LP +C L N+ + + D +++L LAVR L Sbjct: 361 NPCGEQVLPVG------------GVCLLGNLNVTQLVDREAGTIDYDLVDDLVPLAVRFL 408 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 D + D P+ +R +R +G+G L RY + + E + Sbjct: 409 DNVNDLSYVPLEEQQRNLQEKRRIGLGHYGDGSALMMMKTRYGSEEGARVMREFQEHLAN 468 Query: 550 YLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH 609 +AS LA+E+GA P F++ Y +++ + + +E I Sbjct: 469 QAYQASARLAEEKGAFPLFDKDEY----------------LSSPFVQRLSDKTKEMIGDL 512 Query: 610 GLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYEL 668 GLRNS L ++ P+ +S + NA ++GIEP + I+ S+ L + +AYE+ Sbjct: 513 GLRNSHLLSIQPTGNTSTLGNAPSSGIEPVFMHSYIRTSEQPALPDGINRPPMSPNAYEV 572 Query: 669 LWEMPG 674 ++ Sbjct: 573 GQDIDA 578 >UniRef50_C9MSK4 Ribonucleoside-diphosphate reductase n=8 Tax=Prevotella RepID=C9MSK4_9BACT Length = 902 Score = 354 bits (909), Expect = 7e-96, Method: Composition-based stats. Identities = 121/694 (17%), Positives = 231/694 (33%), Gaps = 126/694 (18%) Query: 144 SYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTF 203 A + KY +++ + +S + ++ +A + + + ++ + F Sbjct: 59 DELAARVWVNKYAMKDSLGNIYEKSPEQMHRRIAKEIARIEHKYKNPLTEEEIFNLLDHF 118 Query: 204 KIS-LPTPIMSGVRTPTR--QFSSCVLIECG---DSLDSINATSSAIVKYVSQRAGIGIN 257 + M+G+ + S+C +I DS +I V+ + +R G+G + Sbjct: 119 RYIIPAGSPMTGIGNDHQVASLSNCFVIGLDGDADSYGAILRIDEEQVQLMKRRGGVGHD 178 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 IR GSP+ TG +PF + + + + +Q G R GA L + H + E+ + Sbjct: 179 LSHIRPKGSPVHNSALTSTGLVPFMERYSNSTREVAQDG-RRGALMLSVSIKHPDSEAFI 237 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFER 377 K G +V + V+I + + P Sbjct: 238 DAKMEEG----KVTGANVSVKITDEFMRAAIDDKPYEQQFP------------------- 274 Query: 378 LYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS---PFDPAIAPVR 434 + + ++V A L+ ++ + + D S + Sbjct: 275 ----IDSTEPKCTKKVSAKALWEKIVHNAWKSAEPGVLFWDTIIRESIPDCYADLGFRTV 330 Query: 435 QSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLD 494 +N C EI P P + + + L F A + D + A LA R +D ++D Sbjct: 331 STNPCGEI--PLCPYDSCRLLSLNLYSYVLDPFTDHACFDFDLFSKHAQLAQRIMDDIVD 388 Query: 495 Y-----------------------QDYPI-PAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530 +Y + K + R G+G+ +A G R Sbjct: 389 LEMEKIDLIMAKVKSDPQVDEVKEAEYHLWEKIKDKSGKGRRTGVGITAEGDMIAAMGLR 448 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTI 590 Y A + + A+ ++S +A+E+GA ++ K++ Sbjct: 449 YGTQEATDFSVSVHRALALNAYRSSVRMAEERGAFAIYDA-------------KREEHNP 495 Query: 591 ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG 650 L L E + +G RN + P+ T+S ++ T+GIEP V + K Sbjct: 496 FILRLKEADAQLYEEMIRYGRRNIACLTIAPTGTTSLMTQTTSGIEPVFMPVYKRRRKVN 555 Query: 651 ---------ILRQVVPDYEH---LHDAYELLWEMPGNDGY-------------------- 678 + +V +E H + E+ G D Sbjct: 556 PNDTDVHVDFVDEVGDSFEEYIVYHRKFLTWMEVNGIDTQKKYSQEEIDTLVKRSPYYKA 615 Query: 679 ----------LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK- 727 +++ G +QK++D SIS N S V + K + A++ G K Sbjct: 616 TANDVDWLMKVRMQGTIQKWVDHSISVTVNLPNS------VDEALVNKLYVEAWRSGCKG 669 Query: 728 -TLYYQNTRDGAEDAQDDLVPSIQDDGCESGACK 760 T+Y +R G + + + E K Sbjct: 670 CTIYRDGSRSGVMISVSKKDKKKETNTAEEEKVK 703 >UniRef50_D2R4B9 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R4B9_9PLAN Length = 1041 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 125/702 (17%), Positives = 220/702 (31%), Gaps = 128/702 (18%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS---NYPRETRLQYVKRFYDA 199 ++ A + KY T E S + L V + + ++FY Sbjct: 77 WTQLATNVIVSKYFYGENGTAERERSVKQLIHRVTRTIADWGIEDGYFASAEDGEQFYRE 136 Query: 200 VSTFKI----SLPTPIMSGVRT-----------------------------PTRQFSSCV 226 ++ + + +P+ V Q S+C Sbjct: 137 LTWLCLNQHGAFNSPVWFNVGLFNQYGVTGAKCNWRWNPETGTTEQPENPYEYPQGSACF 196 Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ 286 + D++++I +++ +G G + +R+ + GG +G + F + + Sbjct: 197 IQSVDDNMEAIMRLATSEAMLFKFGSGTGTDLSTLRSHREKLSGG-GKPSGPLSFMRVYD 255 Query: 287 TAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYT 345 GG R A +WH ++ + K E + V I K Y Sbjct: 256 QIAAVVKSGGKTRRAAKMQSLKVWHPDILEFVECKWK---EERKAH-----VLIEKGGYE 307 Query: 346 RLLKGEDIT--LF-SPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLM 402 GE + LF + + L D F E+ E+ T + D S +A L + M Sbjct: 308 ANFNGEAYSSILFQNANLSVRLTDEFMQAHEKNEKWATHWITDASKEGPVYEARWLLNRM 367 Query: 403 MQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALC 462 + G +Q N P + SN C E + C Sbjct: 368 AECAWQCGDPGVQYDTTINKWHTC-PNSGRINASNPCSEYMF------------LDDTAC 414 Query: 463 TLSAFNLGAI------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIG 516 LS+ NL N+D + L A + L+D+ YP R + R LG+G Sbjct: 415 NLSSINLMKFREADGSFNVDRFKTACRLFFIAQEILVDHASYPTEQIARNSHAFRPLGLG 474 Query: 517 VINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKG 576 N + +G Y +A L + AS E+A G + + Sbjct: 475 YSNLGSLIMSNGLPYDSEAAYGLCGSVTALLHGAANLASAEMAAVVGPFEGYEANR--EP 532 Query: 577 ILPIDTYKKDLDTIAN--------EPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 L + +D N E W+ + + G RN+ + L P+ T S + Sbjct: 533 FLRVMQMHRDAVEDINPAGPADLQEAARATWDQVLALGRRTGFRNAQATVLAPTGTISFM 592 Query: 629 SNA-TNGIEPPRGYVSIKASKDGILRQVVP---------------------DYEHLHDAY 666 + T GIEP V K G + ++V Y + +D Sbjct: 593 MDCDTTGIEPDIALVKYKQLAGGGMLKIVNGTVPMALGKLGYDDPQIKGILKYVNENDTI 652 Query: 667 ELLWEMPGN--------------------DGYLQLVGIMQKFIDQSISANTNYDPSRFPS 706 E E+ +++++ Q F+ +IS N Sbjct: 653 EGAPELADEHLAVFDCAFKPANGVRSINWRAHIRMMAAAQPFLSGAISKTVNMP------ 706 Query: 707 GKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPS 748 V + ++ G+K L RDG++ +Q + Sbjct: 707 TDVTPADIGDAYTWGWQLGLKALAIY--RDGSKQSQPLNTKN 746 >UniRef50_O69981 Vitamin B12-dependent ribonucleotide reductase n=38 Tax=Actinomycetales RepID=NRDJ_STRCO Length = 967 Score = 347 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 114/618 (18%), Positives = 201/618 (32%), Gaps = 95/618 (15%) Query: 199 AVSTFKISLPTPIMSGVRTPT-RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGIN 257 A+ S +P+ V TP +Q S+C ++ DS++SI +G G+N Sbjct: 133 ALLHQIFSFNSPVWFNVGTPQPQQVSACFILSVDDSMESILDWYKEEGMIFKGGSGAGLN 192 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESL 316 RIR+ + G +G + F + + + GG R A + + H ++E Sbjct: 193 LSRIRSSKELLSSGGN-ASGPVSFMRGADASAGTIKSGGATRRAAKMVILDVDHPDIEDF 251 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLF---SPSDVPGLYDAFFADQE 373 + K + +R + L G+DIT + ++ + D F + Sbjct: 252 IQTKVKEEEKIRALR---------DAGFDMDLGGDDITSVQYQNANNSVRVNDTFMKAVQ 302 Query: 374 EFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPV 433 + + + + + V A LF M + + IQ D N P + Sbjct: 303 DGGK-FGLTSRMTGEVIEEVDAKALFRKMAEAAWACADPGIQYDDTINAWHTC-PESGRI 360 Query: 434 RQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAI 483 SN C E + C L++ NL + + ++ Sbjct: 361 NGSNPCSEYMH------------LDNTSCNLASLNLMKFLKDDGKGNQSFDAERFSKVVE 408 Query: 484 LAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKT 543 L + A+D + + D+P R LGIG N L G Y L Sbjct: 409 LVITAMDISICFADFPTQKIGENTRAFRQLGIGYANLGALLMATGHAYDSDGGRALAGAI 468 Query: 544 FEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDT----------YKKDLDTIANE 593 + + S ELA G + AK L + DLDT Sbjct: 469 TSLMTGTSYRRSAELAAIVGPYDGYARN--AKPHLRVMKQHSDENAKAVRMDDLDTPIWA 526 Query: 594 PLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGIL 652 W+ + + +G RNS S + P+ T + T G+EP V K G Sbjct: 527 AATEAWQDVLRLGEKNGFRNSQASVIAPTGTIGLAMSCDTTGLEPDLALVKFKKLVGGGS 586 Query: 653 RQVVP-------------------------------DYEHLHDAYELLWEMPGND----- 676 Q+V D L + +++ + Sbjct: 587 MQIVNGTVPQALRRLGYQEEQIEAIVAHIAENGNVIDAPGLKPEHYEVFDCAMGERSISA 646 Query: 677 -GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTR 735 G+++++ +Q +I ++S N S ++ + + A+K GVK L Sbjct: 647 MGHVRMMAAIQPWISGALSKTVNLPES------ATVEDVEEVYFEAWKMGVKALAIYRDN 700 Query: 736 DGAEDAQDDLVPSIQDDG 753 +++D Sbjct: 701 CKVGQPLSAKTKTVKDTE 718 >UniRef50_D0LZM4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Bacteria RepID=D0LZM4_HALO1 Length = 963 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 115/707 (16%), Positives = 218/707 (30%), Gaps = 138/707 (19%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS-----NYPRETRLQYV--KR 195 +S A + KY T E S + + VA +F Y R + + Sbjct: 79 WSQTATNVVVQKYFRGTVGTPERERSVKQMIGRVADTIFGWGRKDGYFRSDKDAWRFRDE 138 Query: 196 FYDAVSTFKISLPTPIMSGVRTPT-RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGI 254 + K++ +P+ V T Q S+C + DS+ SI + +G Sbjct: 139 LVHLLVNQKMAFNSPVWFNVGVETEPQCSACFINSVDDSMSSILTLARTEGMLFKYGSGT 198 Query: 255 GINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEV 313 G N +R+ + GG +G + F + F + GG R A + H ++ Sbjct: 199 GSNLSSLRSSAENLHGG-GTASGPVSFMRGFDAFAGAIKSGGKTRRAAKMVILDAEHPDI 257 Query: 314 ESLLVLKNNRGVEGNRV---------------------RHMDYGVQINKLMYTRLLKGED 352 + K + + ++ ++ V+++ ++ Sbjct: 258 VDFVECKAKEEQKAWALIDAGYDGGFNEPGGAYDSVNYQNANHSVRVSDSFMQAVVDDSS 317 Query: 353 ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRI 412 T + D ++ + A EL + G Sbjct: 318 WTTHAVLDGRDIH--------------------------TMPARELMRKIADAAHLCGDP 351 Query: 413 YIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI 472 +Q N +P A + SN C E + + C L++ NL Sbjct: 352 GMQFDSTINDWNPCI-GTARINASNPCSEYMF------------LDDSACNLASLNLRRF 398 Query: 473 ------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAK 526 +++ + + A++ ++D YP P + R LG+G N L Sbjct: 399 QSEDGNFDVEAYKHAIEITTLAMEIIVDNASYPTPKIGENSHRFRPLGLGYANLGALLMS 458 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQ-GACPWFNE---------TTYAKG 576 G Y + + S +A + G ++E + K Sbjct: 459 RGLPYDSEPGRAYAAALTAILCGQAYRTSARIAADATGPFAGYDENREPFLRVMNKHRKA 518 Query: 577 ILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGI 635 + ID D + E W + E + HG RN+ + L P+ T + + + T G+ Sbjct: 519 VADIDAALVPYDLM--EAARGAWNDVVELGEKHGFRNAQTTVLAPTGTIAFLMDCDTTGV 576 Query: 636 EPPRGYVSIKASKDGIL-------------------RQVVPDYEHL-------------- 662 EP V K G + +Q+ H+ Sbjct: 577 EPDIALVKYKRLVGGGMLKMVNQTVPEALRRLGYSEQQLEGIINHIDTQESIEGTSVLKE 636 Query: 663 --HDAYELLWEMPG------NDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL 714 ++ + P G+++++ +Q F+ +IS N + + Sbjct: 637 EHLPVFDCAFRSPSGTRSIHYMGHIRMMSAVQPFLSGAISKTVNLP------SDCTVGDI 690 Query: 715 LKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 L A+K G+K + RDG + Q Q + A + Sbjct: 691 EDAYLQAWKLGLKAIAVY--RDGCKRTQPLSTSKQQATSNGAIAKTL 735 >UniRef50_A7HCF4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=5 Tax=Cystobacterineae RepID=A7HCF4_ANADF Length = 929 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 121/695 (17%), Positives = 220/695 (31%), Gaps = 101/695 (14%) Query: 130 QMDTFIDHDRDM----TFSYAAVKQLEGKYLVQNRVTGEIYES-AQFLYILVAACLFS-- 182 + I RD+ ++S A + KY + + E + L V + + + Sbjct: 53 EGGAVIFEQRDVEVPKSWSMLATNVVASKYF-RGSLGSPTRERSVKQLVGRVVSTIAAWG 111 Query: 183 -----NYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP-TRQFSSCVLIECGDSLDS 236 E + V K+S +P+ V Q S+C + GDS+DS Sbjct: 112 RKDGYFATEEDAAAFEADLAHLVYRQKMSFNSPVWFNVGVEEHPQCSACFINSVGDSMDS 171 Query: 237 INATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG 296 I + +G G N +IR+ + GG +G + F + F GG Sbjct: 172 ILRLAHTEGMLFKYGSGAGSNLSKIRSSKERLSGG-GEASGPVSFMRGFDAFAGVIKSGG 230 Query: 297 V-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITL 355 R A + H ++ + K + + + Y N + G ++ Sbjct: 231 KTRRAAKMVILDADHPDIGEFVSCKADEEKKAWALIDAGYDGGFN------VKGGAYDSV 284 Query: 356 F--SPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIY 413 F + + + D F + +R + + D + ++A +L + + G Sbjct: 285 FFQNANHSIRVTDGFMRSVLD-DRAWELTARTDGHALESIRARDLMRQITEAAWLCGDPG 343 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI- 472 +Q N PA + SN C E + + C L++ NL Sbjct: 344 MQFDTTINAWHTC-PATDRINASNPCSEYMF------------LDDSACNLASLNLMHFR 390 Query: 473 -----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKH 527 +++ + L V A + L+ YP + + R LG+G N L Sbjct: 391 GIDGAFDVESFKRAVDLTVLAQEILVSNAKYPTEQIGKNSEDYRPLGLGYANLGALLMAS 450 Query: 528 GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETT------YAKGILPID 581 G Y + S +A+ G + K +D Sbjct: 451 GLPYDSDGGRACAGAITALMTGEAYAMSARIAERMGPFAGYERNREPFLGVVRKHANHVD 510 Query: 582 TYKKDLDTIANEPLHYD-WEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPR 639 D W G RN+ L+ L P+ T + + T GIEP Sbjct: 511 RIDPTFVERPLLDAARDAWGDALRLGTQSGYRNAQLTVLAPTGTIGFMMDCDTTGIEPDI 570 Query: 640 GYVSIKASKDGILRQVVPD-------------------------------YEHLHDAYEL 668 V K G + ++V + L DA+ Sbjct: 571 ALVKYKKLVGGGVLKIVNNTVPLALQRLGYSADAIASTLEFIDKVETIEGAPELRDAHLP 630 Query: 669 LWE----------MPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDL 718 +++ G+++++G +Q F+ +IS N P + Sbjct: 631 VFDCAFKPQNGTRSIHYMGHIRMMGAVQPFLSGAISKTVNMPTEATP------ADIETAY 684 Query: 719 LTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDG 753 L A+K G+K + RDG + +Q +++ Sbjct: 685 LEAWKLGLKAIAVY--RDGCKRSQPLNTGKAKEEE 717 >UniRef50_B0C346 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C346_ACAM1 Length = 649 Score = 338 bits (868), Expect = 4e-91, Method: Composition-based stats. Identities = 122/683 (17%), Positives = 230/683 (33%), Gaps = 127/683 (18%) Query: 149 KQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY-PRETRLQYVKRFYDAVSTFKISL 207 K + KYL+++ V+ +E VA + S E + + ++F + K Sbjct: 16 KAVLQKYLIEDEVS---WEDVVH---RVATYVASAESTPEQQSYWQEKFLSILQPMKFVP 69 Query: 208 PTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGR------I 261 I++ TR +C ++ D + I S V R G+GIN G I Sbjct: 70 GGSILANCDHGTRGLLNCFVLSAEDHIHDITKLVSDSVLTTKFRGGVGINIGAEGSKGYI 129 Query: 262 RALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLK 320 R G+P + + G K + G R GA H ++ + K Sbjct: 130 RQKGAPFQ--DGKALGPCAVLDMVSENSKKITTGNKARRGAFLFSMNWKHPDIWEFIQAK 187 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 ++ ++ + + + + E PS E Sbjct: 188 TQSTIDA------NFAKSVMEELAQLAQQDE------PSQGKQEKLKAL-HTEVGTAWVE 234 Query: 381 KYEKDDSIRKQRVK----------------------AVELFSLMMQERASTGRIYIQNVD 418 + + R +R A +L+ M + +T + +D Sbjct: 235 THLNPEGKRDRRWHNANISVQLDDEFFAKLDQGDEEANKLWQAMAENAHATADPGLLLID 294 Query: 419 HCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN----- 473 + SP + +N C EI LP + C L + L Sbjct: 295 NAKRRSPIRDFVT---CTNPCGEIFLPPN------------SACNLGSLVLTKFVRRTAE 339 Query: 474 -----NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMG-RRTLGIGVINFAYYLAKH 527 + D+L E +A+R LD +LD ++ P K R LG+G++ +A YL Sbjct: 340 GNIEIDWDDLAETVRIAIRFLDNVLDVSEFATPDQKHNVRDVFRQLGLGIMGWADYLKLA 399 Query: 528 GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDL 587 Y + I + + S +A E+GAC +++ + P + + Sbjct: 400 RIPYDSARHLEEIDRWGSWIAAHAYRTSEAIAAEKGACGVWDQIKDIQTGNPFERWMDSE 459 Query: 588 DTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIK-- 645 N + + R+ + RNST+ ++ P+ + +Q++ + EP G K Sbjct: 460 GNYYNGTEAHHND--RQDLTQVPRRNSTVLSIAPTGSIAQLAACSWAFEPDFGLTLWKQV 517 Query: 646 -----ASKDGILRQVVPDYEHLH----------------------------DAYELLWEM 672 S+ ++ + P + L+ ++++ E+ Sbjct: 518 FVDASRSQQNWVQILNPYLDELNLPEADAEIVKQTGSLADTNYGKQHPEIARSFKIAREI 577 Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLY 730 P ++ + Q +ID SIS N + ++ + A K G+K T+Y Sbjct: 578 P-PGWHILVQSKWQSWIDSSISKTINLP------AHATVDEIKQIYRLAEKAGLKGVTIY 630 Query: 731 YQNTRDGAEDAQDDLVPSIQDDG 753 R G D++ V + + D Sbjct: 631 ----RSGTLDSEPIKVGNSEKDS 649 >UniRef50_B4RFH2 Ribonucleoside-diphosphate reductase alpha chain n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RFH2_PHEZH Length = 570 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 111/567 (19%), Positives = 188/567 (33%), Gaps = 97/567 (17%) Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE-----CGDSLDSINATSSAIVK 246 + RF + F+ I +G P +C ++ G D V Sbjct: 48 WRGRFRALLEDFRFLPGGRIQAGAGDPAAVLFNCFVLPAFGPGPGAEADRALDALREAVA 107 Query: 247 YVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFY 306 + G+G + G+ G G + + + A + G R GA Sbjct: 108 TLRAGGGVGCDVSGAPPAGAAAERGP-PAPGPVGYLHLWDAACRVFLAGATRQGALMGAL 166 Query: 307 PMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYD 366 H +VE+ K G + V + + + D L P Sbjct: 167 RCDHPDVEAFAAAKTAPGALSR----FNLSVAVTEAFMAAVAADADWPLRFP-------- 214 Query: 367 AFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPF 426 E +R V+A L++ +++ TG + +D N +P Sbjct: 215 ---------------VETGPVVR--TVRARGLWTRILRCAYETGDPGVLFIDRINAENPL 257 Query: 427 DPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEEL----- 481 + +N C E+ LP + C L + NL E Sbjct: 258 AWRE-RLAATNPCGEVPLP------------DYGACDLGSLNLTRFVAAPFTPEARLDLA 304 Query: 482 -----AILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 A AVR LD ++D +P+ A A R +G+G+ A L G RY + ++ Sbjct: 305 GLAEAAAAAVRLLDDVIDISAFPLAAQADEARATRRIGLGITGLADALVMLGLRYGEAAS 364 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 + I+ AS LA+E+GA P G Sbjct: 365 LRAAGEAMRTIRDAAYGASAGLAREKGAFPACEAERLLAGPFARRLP------------- 411 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDG----- 650 E LR +I HGLRNS L A+ P+ + S ++ + G+EP V + + Sbjct: 412 ---EPLRAAIARHGLRNSHLLAVAPAGSISLLAGGISPGLEPIFAAVQERTLRTSPGETR 468 Query: 651 ----------ILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYD 700 + R+ + L A+ ++P D +L + +Q ++DQ+IS N Sbjct: 469 AVRWTAASVALWRRATGEAAGLPPAFAAAHDIPA-DAHLDMQAALQPYVDQAISKTVNVP 527 Query: 701 PSRFPSGKVPMQQLLKDLLTAYKFGVK 727 + P + + A+ G+K Sbjct: 528 V------ETPFEDFARIYAGAHARGLK 548 >UniRef50_D2XAL3 Ribonucleoside diphosphate reductase alpha subunit n=1 Tax=Marseillevirus RepID=D2XAL3_9VIRU Length = 916 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 97/393 (24%), Positives = 163/393 (41%), Gaps = 24/393 (6%) Query: 51 DGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMV 110 D S+ ++ + S PD+ LA R I L + +F A Sbjct: 29 DACTDSEFFKSFSEVCVFK-SFIHPDWGVLAGRAEIRKLWSETPEKFSQMAK-------- 79 Query: 111 EMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTG---EIYE 167 M + ++ +++D H+RD F + A+ LE YL++ + ++E Sbjct: 80 GMKSVLDEKFYEFVASHSQELDNICSHERDNRFDWMAINTLEKSYLLKKKCFDGKLRVFE 139 Query: 168 SAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVL 227 Q +Y+ VA L+ +Q +K FYD +S ++ +PI SSC L Sbjct: 140 RPQHMYLRVATQLWMP-----DVQKIKEFYDGLSLGFYTVASPIFFNAGLKKFSGSSCFL 194 Query: 228 IECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQT 287 + D L I T + S+ G+G +A +R S I GG +G + + Sbjct: 195 GKIPDDLIGIIDTWKQMAIISSRSGGVGYSASSVRH--SDIGGGLGESSGVVSLLRVPDA 252 Query: 288 AVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRL 347 + QGG R G+ T F WH+++ + + K G + + R + Y + + L R+ Sbjct: 253 VLGYVDQGGRRKGSGTFFLACWHIDIFTFVDAKKPGGDDLKKARQLFYAIWTSDLFMKRV 312 Query: 348 LKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERA 407 + +LF P + PGL + + D FE LY +YEK+ R VKA EL+ ++ +A Sbjct: 313 ETDGNWSLFCPKEAPGLDEIYGKD---FEDLYERYEKEGRAR-TTVKAQELWHHILVAQA 368 Query: 408 STGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 G +I D + NLC+ Sbjct: 369 EVGMPFIVYKDAICRKNN-QKHTGIPHSLNLCV 400 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 80/402 (19%), Positives = 128/402 (31%), Gaps = 100/402 (24%) Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-------NNLDELEELAILAVRA 488 + CLEI T + EIA C LS+ L + + L VR+ Sbjct: 535 TGQCLEITENTS--------DEEIASCNLSSVCLNSFVDKESKKYDFGALASSVRFIVRS 586 Query: 489 LDALLDYQDYP--IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA 546 L+ ++D YP +P+ K + R LGIGV A A + D A NL K FE Sbjct: 587 LNNVVDRNYYPSELPSIKTTNLRHRPLGIGVQGLADTFAMMDICWGDEEARNLNRKIFET 646 Query: 547 IQYYLLKASNELAKEQGA-------CPWFNETTYAKGILPIDTYK--------------- 584 + + + S +++KE+ + F + +KG D + Sbjct: 647 MYHAAVTESRKISKERASLGFQTPYYETFPGSPLSKGFFAHDLWDAEALHKESGIPFDSI 706 Query: 585 --------KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIE 636 + I +DW+ R G+ NS L ALMP+ +++QI E Sbjct: 707 TVEQVKSYRKKKGIPESFCGFDWDKERLETMRDGVYNSLLIALMPTASTAQILRNNESFE 766 Query: 637 PPRGYVSIKASKDGILRQVVPDY------------------------------------- 659 + + G V + Sbjct: 767 AFTSIIGKRTVLSGAFAVVNRHFIDDMIGLGVWNKKNMLICLKGQGSVQGITTDDITKFE 826 Query: 660 --EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKD 717 EH+ Y +E+ QL +++ QS S N + Q+L Sbjct: 827 RLEHIKRKYLNAFEL-SQKRLCQLGIDRSRYVCQSSSHNCFMRNPTY-------QKLTSY 878 Query: 718 LLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 ++ G KT +YY T V + C + Sbjct: 879 HFFQWENGAKTGMYYLRTSAPGVA-----VSVAAEAECLMCS 915 >UniRef50_A5EVD2 Ribonucleotide reductase, alpha subunit n=30 Tax=root RepID=A5EVD2_DICNV Length = 573 Score = 335 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 138/648 (21%), Positives = 227/648 (35%), Gaps = 157/648 (24%) Query: 151 LEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTP 210 L+ YL+ G E + + + +RF+ ++ S +P Sbjct: 40 LQRGYLL----DGTSAEK------RMKEIVARAAEILPFADFEQRFFHYLARGYYSFSSP 89 Query: 211 IMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRG 270 I S SC GDS+ I T++ + G G IR GS IR Sbjct: 90 IWSNFGLARGLPISCFGSYIGDSIYDIMRTTAEVGMMSKIGGGTSAYFGAIRPRGSDIRD 149 Query: 271 GEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRV 330 G F K F T + SQG R G + + H ++E L + EGN + Sbjct: 150 -NGKSDGSFNFSKLFDTVIDVISQGTSRKGQFAGYIDIEHGDIEEWLDIHT----EGNPI 204 Query: 331 RHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK 390 + M YGV I+ + G+ K Sbjct: 205 QLMYYGVCISHQWLAEMKAGDS------------------------------------EK 228 Query: 391 QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP--FDPAIAPVRQSNLCLEIALPTKP 448 +R+ ++ ++Q ++ TG Y+ D+ N P + P+ SNLC EI LP Sbjct: 229 RRI-----WAKVLQRKSETGIPYLFFKDNANAGRPDVYKDLNLPIYASNLCTEIMLPASE 283 Query: 449 LNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDAL----LDYQ-DYP-IPA 502 E +C LS+ NL + L V LDA+ ++ D P + Sbjct: 284 --------EESFVCCLSSMNLLYYEEWKN-TDAVELLVYFLDAVMTEFIEKSADLPFLER 334 Query: 503 AKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQ 562 A+R AM R LG+GV+ + YL + +A ++ F+ +Q L AS LA+ Sbjct: 335 ARRFAMRHRALGLGVLGWHSYLQSQHLPFDSLAAMQKNNEIFQLLQRKTLSASRTLAEHL 394 Query: 563 GACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPS 622 G E ++ +G RN+TL ++ P+ Sbjct: 395 GEP--------------------------------------EILRGYGRRNTTLMSVAPT 416 Query: 623 ETSSQISN-ATNGIEPPRGYVSIK--------------------------------ASKD 649 ++SS I + +EP + +K D Sbjct: 417 KSSSFILGSVSPSVEPLKSNYHVKDLAKIKTTYKNPFLVALLAEKGLDTETTWESILLND 476 Query: 650 GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKV 709 G ++ + + ++ E+ +Q QK+IDQ S N P Sbjct: 477 GSVQHLPDLSDEEKAIFKTFSEI-NQLSIIQQAAQRQKYIDQGQSINLMIHP------DT 529 Query: 710 PMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESG 757 P + + + LTA + GVK++YYQ++ A+ +L+ C+S Sbjct: 530 PTRDINQLYLTAAELGVKSIYYQHSMSAAQRFNRNLL------HCQSC 571 >UniRef50_Q1J1T0 Ribonucleoside-diphosphate reductase n=3 Tax=Deinococci RepID=Q1J1T0_DEIGD Length = 1010 Score = 334 bits (857), Expect = 7e-90, Method: Composition-based stats. Identities = 107/614 (17%), Positives = 189/614 (30%), Gaps = 155/614 (25%) Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF-YKHF 285 + D + I + A+ + I+ ++R G+PI+G +G + F + F Sbjct: 212 VQAVPDDMGGIIDAARAVAESAKVGVEPRIDLSQMRPEGAPIKGSGGTSSGPVSFLMEIF 271 Query: 286 QT------------------------AVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKN 321 ++ QGG R GA + H +V L K+ Sbjct: 272 DNFLEWANRGGETSGPINTLRYVYAPVLRVVRQGGTRRGAGMATIAIEHPDVLDFLTAKD 331 Query: 322 -NRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 +R + + + +++ + L +VPG Y L T Sbjct: 332 LDREAAEGDISTFNISILVSEQFWQALEGDALWH-VDVQEVPGKYYLAPQSGPYDGHLPT 390 Query: 381 KYEKDDSIRKQR-------------------VKAVELFSLMMQERASTGRIYIQNVDHCN 421 E+ + + V A L+ + + +TG + VD N Sbjct: 391 LPERAEDGARGVPLYRGAPRGRSQPADARPGVPAKWLWDQIAEHAWATGEPGLIFVDRVN 450 Query: 422 THSPFDP--AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NN 474 HS +R +N C EI L GE C L A NL A + Sbjct: 451 EHSALKNLGKRYEIRSTNPCGEIPL----------TVGEP--CDLGAINLAAYVQNSRFD 498 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 VR LD +LD + + + + R LG+GV+ A L K G RY Sbjct: 499 FAAFRADVRTCVRFLDDVLDVNVFALEDNRVASQDLRRLGLGVMGLADALIKLGLRYDSE 558 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP 594 + + A++ + S L +E+G P + ++ I + P Sbjct: 559 AGRAAIAEIMTALREEAVAESERLGQERGVYPVYE---------------RNAQKIPHSP 603 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD----- 649 RN + + P+ T+S + ++GIEP + Sbjct: 604 ----------------RRNVAVLTVAPTGTTSMLMGVSSGIEPVFSPFIWRKIGAEYRAL 647 Query: 650 --------------------------------------GILRQVVPDYEHLHDAYELLWE 671 G + + E L + + Sbjct: 648 LHPLFMELLNQYPPAANMDDGQGGWNWDRVTEAVSENHGSVVGLAFIPEALQQVFVCAHD 707 Query: 672 MPGNDGYLQLVGIMQKFID-------QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKF 724 + D ++++ G++Q+ D S+S N S + + AY+ Sbjct: 708 IKPLD-HVRMQGVVQQAFDAGGQHAANSLSKTINLPNS------ATVADVRAAYAEAYRT 760 Query: 725 GVK--TLYYQNTRD 736 G K T+Y +R Sbjct: 761 GCKGITVYRDGSRQ 774 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 62/194 (31%), Gaps = 38/194 (19%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVS 201 F A +YL G+I ++ +A + + E R ++ +++YD ++ Sbjct: 11 NFDENAQHIARRQYL--QPGDGDIL----GMFRRIADWVAAAEAPEARERWAQKYYDLMA 64 Query: 202 TFKISLPTPIMSGVRTPTRQFSSCVLI----ECGDSLDSINATSSAIVKYVSQRAGIGIN 257 + +++G T +C + +S D I + + G G+N Sbjct: 65 QKRFCPGGRVLAGAGTQHGNVLNCFVQGATEHAPESFDGIMEVAKKLALVTKVGGGNGVN 124 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 G P GVRG ++ H +V + Sbjct: 125 LDVYTPR----------AQGSRP-------------DAGVRG---WVYMSAAHPDVGDFI 158 Query: 318 V--LKNNRGVEGNR 329 ++ +G++ Sbjct: 159 EGLMRPPTQPDGDK 172 >UniRef50_Q7UI46 Vitamin B12-dependent ribonucleotide reductase n=3 Tax=Planctomycetaceae RepID=NRDJ_RHOBA Length = 1040 Score = 331 bits (848), Expect = 8e-89, Method: Composition-based stats. Identities = 116/729 (15%), Positives = 222/729 (30%), Gaps = 123/729 (16%) Query: 123 YTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYES-AQFLYILVAACLF 181 +E + D + ++S A + KY + + E + L V + Sbjct: 75 IKDESGNALFEQTDCEVPASWSQLATNVVVSKYFYGDPKNTDERERSVRQLIHRVTRTIS 134 Query: 182 S---NYPRETRLQYVKRFYDAVSTFKI----SLPTPIMSGVRT----------------- 217 + +RFY ++ + + +P+ V Sbjct: 135 DWGLADGYFDTPEDGERFYRDLTWLSLHQHGAFNSPVWFNVGLHAQYDVEGDMCNWHWDR 194 Query: 218 ------------PTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALG 265 Q S+C + D+++ I + + +G G + IR+ Sbjct: 195 TENTTAQPDNPYEYPQGSACFIQSVDDNMEDIMRLACSEAMLFKFGSGTGTDLSTIRSQR 254 Query: 266 SPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRG 324 + GG +G + F + + + GG R A +WH ++ + K Sbjct: 255 EKLSGG-GTPSGPLSFMRVYDSIAGVVKSGGKTRRAAKMQSLKVWHPDILEFIECKWAEE 313 Query: 325 VEGNRVRHMDYGVQINKLMYTRL-LKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE 383 + + + Y N Y + + ++++ L D + + E T++ Sbjct: 314 KKAHALIREGYDSNFNGEAYASVCFQNANLSV-------RLTDDYMEAVRKNENFQTRWI 366 Query: 384 KD-DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEI 442 D + A EL + M + G +Q N P + SN C E Sbjct: 367 TDKPTTEPPSYVAKELLNKMAECAWHCGDPGVQYDTTINKWHTC-PNSGAINASNPCSEY 425 Query: 443 ALPTKPLNDVNDENGEIALCTLSAFNLGAI------NNLDELEELAILAVRALDALLDYQ 496 + C L++ NL + + A + L+D+ Sbjct: 426 MF------------LDDTACNLASINLMKFVQQDGSFDHERFRAACRTFFIAQEILVDHA 473 Query: 497 DYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASN 556 YP R + R LG+G N + G Y +A + + + S Sbjct: 474 SYPTEPIARNSHKFRPLGLGYSNLGSVIMTAGLPYDSDAARGMCGSLTALLHGEANRTSA 533 Query: 557 ELAKEQGACPWFNETTYAKGILPI------DTYKKDLDTIANEPLHYDWEALRESIKTHG 610 ELA G + E + D D E W+ + E + +G Sbjct: 534 ELASVVGTFDGYVENEAPMLRVMQMHRDACDQINDDGPAELKEAARELWDGVLEIGEKYG 593 Query: 611 LRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPD-----YEHLHD 664 RN+ + L P+ T S + + T GIEP V K G + ++V + L Sbjct: 594 FRNAQATVLAPTGTISFMMDCDTTGIEPDIALVKYKQLAGGGMLKIVNQTVKLGLKTLGY 653 Query: 665 AYELLWEM------------------------------------PGNDGYLQLVGIMQKF 688 + + E+ G ++ ++ Q F Sbjct: 654 DADTIDEILKYVDANDTIEGAPGLQDEHLAVFDCAFKPANGVRSIGWRAHITMMAAAQPF 713 Query: 689 IDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPS 748 + +IS N V Q + ++ G+K + RDG++ +Q S Sbjct: 714 LSGAISKTVNMP------TDVTPQDIADAYFWGWELGLKAIAIY--RDGSKQSQPLNTKS 765 Query: 749 IQDDGCESG 757 + ++ Sbjct: 766 DEQKATDAA 774 >UniRef50_B4D0S2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Verrucomicrobia RepID=B4D0S2_9BACT Length = 1043 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 118/798 (14%), Positives = 244/798 (30%), Gaps = 155/798 (19%) Query: 82 ARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDM 141 R+ + R++ + ++ H + T++ K + + Sbjct: 18 GRVPVAATRRRPQEGLKFARVFSQKTIAPFDEIEWEHRTAEITDDSGKAIFKQESVEVPK 77 Query: 142 TFSYAAVKQLEGKYLV------QNRVTGEIYESAQFLYILVAACLFS---NYPRETRLQY 192 ++S A K KY + G S + L V + + Sbjct: 78 SWSALATKIAVSKYFYGDIANGTDPYKGGRECSVRQLVHRVTRTITDCGIKDGYFADQES 137 Query: 193 VKRFYDAVS----TFKISLPTPIMSGVRT------------------------------- 217 + FY+ ++ + +P+ V Sbjct: 138 AEIFYNELTWLCVNQHGAFNSPVWFNVGLWHQYHTGEGRGEGNYFYNHKTGQAQRAATQY 197 Query: 218 PTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTG 277 Q S+C + D+++ I + + +G G + +R+ + GG +G Sbjct: 198 EYPQGSACFIQSVDDNMEDIMRLAMSEAMLFKYGSGTGSDLSTLRSTREKLSGG-GRPSG 256 Query: 278 CIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYG 336 + F K + GG R A WH ++E + K + + Y Sbjct: 257 PLSFLKVYDQVANVVKSGGKTRRAAKMNTLKDWHPDIEEFIEAKTKEEKKAWALIEQGYD 316 Query: 337 VQINKLMYTRLL-KGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKA 395 N Y ++ + E++++ + D F E + +TK D +++ +A Sbjct: 317 GSYNGDAYGSIMYQNENLSV-------RVSDEFMNAAVEGKEWWTKRVTDGKPCEKK-EA 368 Query: 396 VELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDE 455 L + + G +Q + +N C E Sbjct: 369 KALLRKIAEGTHLCGDPGVQFDTTIDKWHTCK-GTGRQNSTNPCSEYLF----------- 416 Query: 456 NGEIALCTLSAFNLGAI------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMG 509 + C L++ NL +++ + + + A + ++D YPI + Sbjct: 417 -LDNTACNLASLNLLKFKKADGGFDVERFKAAVRVFITAQEIIVDNASYPIKEIAENSHI 475 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 RTLG+G N + +G Y L + + + S +LAK G P + Sbjct: 476 FRTLGLGYANLGALIMSYGLGYDTDEGRALAGAITSIMTGHAYEQSAKLAKTMGPFPGYK 535 Query: 570 ETTYAKGILPIDTYKK--------------------DLDTIANEPLHYDWEALRESIKTH 609 +T + +D+ + D E W+ K H Sbjct: 536 DTRASGVKKTVDSTNESYMLEVIDLHRSHVSRIQDSDRFGYLKEEAQKCWDGALAQGKKH 595 Query: 610 GLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDG------------------ 650 G RN+ ++ L P+ T + + T GIEP V K G Sbjct: 596 GYRNAQVTVLAPTGTIGFLMDCDTTGIEPDIALVKYKLLAGGGMLKIVNQTVKPALQNLG 655 Query: 651 -ILRQVVPDYEHLHDAYELLWEMPGND--------------------------------G 677 ++ H+ D ++ + ++ D G Sbjct: 656 YSFAEIEGVVAHI-DKFDTIEDVTDEDGTTIPSGLKPEHLPVFDCAFKPHRGSRSLHYRG 714 Query: 678 YLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDG 737 +++++ Q F+ +IS N + ++ ++ + ++ G+K + RDG Sbjct: 715 HIRMMAAAQPFLSGAISKTVNLP------EEATVEDIVNTYVEGWQLGLKAIAIY--RDG 766 Query: 738 AEDAQDDLVPSIQDDGCE 755 ++ + V +D G Sbjct: 767 SKRSAPLNVKKTKDMGTA 784 >UniRef50_D1Y8J0 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8J0_9BACT Length = 894 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 117/748 (15%), Positives = 234/748 (31%), Gaps = 177/748 (23%) Query: 100 PALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQN 159 ++ + ++MG +N L+ +E ++ R Y A +Y Sbjct: 3 KSMKERFRDSLDMGLLENPLVPRQSEN-----ARWLLEQR-----YFA-----DRY--DP 45 Query: 160 RVTGEIYES-AQFLYILVAACLFSNYP---RETRLQYVKRF----YDAVSTFKISLPTPI 211 G E + V+ + + +++++R + + + +P Sbjct: 46 ETGGLRKERSFEEFARRVSRIVCTAESLYRGADEIEWIRRLEKNLFADLVEGRFIFNSPC 105 Query: 212 MSGVR--------------------------------TPTRQFSSCVLIECGDSLDSINA 239 + T +Q +C +I+ DS++ I Sbjct: 106 LFASGAGMTRVPELAELIYRSPDEMELADYRRLYDGKTDNQQLFACFVIDIPDSIEGIFD 165 Query: 240 TSSAIVKYVSQRAGIGINAGRIRALGSPIRG-GEAFHTGCIPFYKHFQTAVKSCSQGGVR 298 + A G+G N GR+R G+ I+G +G + F + + T QGG R Sbjct: 166 SVRAAAVISKYGGGVGGNFGRLRERGADIKGGTGGKASGPVSFMETWNTMGCVVVQGGRR 225 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 A P H ++E + K G ++ + + V ++ + + L S Sbjct: 226 RAALMGMLPDDHPDIEQFMDAKTEEG----KLSYFNISVCVSDELVGAAREKRPFALRS- 280 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 + + + V EL++ + Q G + +D Sbjct: 281 -------------------------RANGKVVRTVSGDELWNKLCQNAWRRGDPGVFFID 315 Query: 419 HCNTHSPFDPAIA-PVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----- 472 N + + + +N C E LPT C L + NL Sbjct: 316 RANDDNLLKLSGDFDIESTNPCGEQPLPT------------YTSCNLGSVNLVKFVRPDE 363 Query: 473 -----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKH 527 +++ + ++ LD ++D YP+ R +G+G++ A Sbjct: 364 TGRQSFDMEGFMDQVYRSIYYLDLVIDATSYPLQRIGERTKRIRPVGLGLMGLADAAILS 423 Query: 528 GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW---------FNETTYAK-GI 577 G Y S + + L A+ + G P+ F E A G Sbjct: 424 GDVYGSESFKSFCDSLGAHMAGAALMATVDAVAHMGKEPFSESFAVARLFEEEHRAHGGE 483 Query: 578 LPIDTYKKDLD-----------------------------TIANEPLHYDWEALRESIKT 608 L + ++D + + + + L ++ Sbjct: 484 LFARQWIDEMDLNSYREFIARMRTHGQVPYTLLNTLEILPDVLGDEALPELKRLMTALLE 543 Query: 609 HGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG-----ILRQVVPDYEHLH 663 LRNS ++ P+ + S I +++ GIEP + + +R+ Sbjct: 544 GKLRNSRRLSIAPTGSISMIFDSSAGIEPNFAWRWSRKVMKSDGDGWEVREYFHPLITQK 603 Query: 664 DA-------------YELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVP 710 +A Y +++ + ++ + GI +++D IS N S Sbjct: 604 EADELRGSGVISDPRYVTAYDI-SPEQHVDVTGIFARYVDSGISKTVNL------SSSAT 656 Query: 711 MQQLLKDLLTAYKFGVK--TLYYQNTRD 736 + + K T Y G K T+Y +RD Sbjct: 657 VDDVRKVYETCYDMGCKGITIYRDGSRD 684 >UniRef50_Q1ISM3 Ribonucleoside-diphosphate reductase n=3 Tax=Bacteria RepID=Q1ISM3_ACIBL Length = 1004 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 121/725 (16%), Positives = 224/725 (30%), Gaps = 137/725 (18%) Query: 123 YTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA---- 178 T+ + ++ +D + +S A + KYL T E + L VA Sbjct: 57 ITDAQGNKIFEQLDVETPKDWSMTATNIVASKYLHGTLGTSERESGVRALIARVAETITR 116 Query: 179 -CLFSNYPRETRLQYV--KRFYDAVSTFKISLPTPIMSGVRTPT---------------- 219 + Y R + + + K++ +P+ V Sbjct: 117 WGIEGGYFRTSDDAAIFHDELVHLLVQQKMAFNSPVWFNVGCDRIEPQADGANWHWNFLK 176 Query: 220 ------------RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSP 267 Q S+C + DSLDSI + +G G N +R+ Sbjct: 177 QQAEFGPVGYTRPQCSACFINSVHDSLDSILTLAKTEGMLFKWGSGTGTNLSPLRSSNEQ 236 Query: 268 IRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVE 326 + GG +G + F + F GG R A + + H ++ + K + Sbjct: 237 LSGG-GTASGPLSFMRGFDAFAGVIKSGGKTRRAAKMVILNIEHPDIVEFIDCKAKEEAK 295 Query: 327 GNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDD 386 + Y I + ++ + D F TK K Sbjct: 296 AWALMQQGYDGSSPD-----AEAYSSIFFQNANNSVRVTDDFMYAVVRDADFSTKAVKSG 350 Query: 387 SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPT 446 + K KA L S + + G +Q N A + SN C E Sbjct: 351 DVVK-TFKARWLLSKISEATWQCGDPGMQYDTTVNRWHT-SKNTARINASNPCSEYMF-- 406 Query: 447 KPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALDALLDYQDYPIP 501 + + C L++ NL ++ + + A + L+D YP Sbjct: 407 ----------LDDSACNLASLNLMKFAPNGTFDVAAYRHACAITITAQEILVDNAGYPTE 456 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 + + + R LG+G N L G Y + + + S+++A E Sbjct: 457 SIMKNSHDYRPLGLGYANLGALLMAAGLPYDSDAGRDYAACVTAIMCGEAYLQSSKIA-E 515 Query: 562 QG------------------ACPWF--NETTYAKGILPI-----DTYKKDLDTIANEPLH 596 G ACP + N + I + +K++ E Sbjct: 516 LGQPLTPATPITQSVEITGSACPGWYVNREPFLDVIRMHRASVNNINQKNVPAPVFEAAK 575 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQV 655 W+ + + HG RNS ++ L P+ T + + T GIEP V K G + ++ Sbjct: 576 ATWDEALQHGERHGYRNSQVTVLAPTGTIGFMMDCDTTGIEPDLALVKYKKLVGGGMIKI 635 Query: 656 VPD-------------------------------YEHLHDAYELLWE----------MPG 674 V + H+ D + +++ Sbjct: 636 VNNTVPAALFKLGYTSDQANATVSYIDATGTIEGAPHIKDEHLAVFDCSFKPAKGTRTIS 695 Query: 675 NDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQ 732 G+++++ Q FI +IS N + +++ + ++K G+K +Y Sbjct: 696 YMGHVKMMAATQPFISGAISKTVNLPK------DATIDDIMEAYIQSWKLGLKAVAIYRD 749 Query: 733 NTRDG 737 ++ G Sbjct: 750 GSKGG 754 >UniRef50_A2BL44 Ribonucleoside-diphosphate reductase n=2 Tax=Desulfurococcales RepID=A2BL44_HYPBU Length = 991 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 93/549 (16%), Positives = 170/549 (30%), Gaps = 137/549 (24%) Query: 140 DMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDA 199 D F+Y A++ L +Y+V+N G E+ + VA + + Y Sbjct: 67 DKGFTYNAIRVLLARYMVRNEY-GVPMETPSMVMARVAWGFSTRVDP-------VKLYRL 118 Query: 200 VSTFKISLPTPIMSGV--RTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGIN 257 + K +P + + S+C + D + +I ++ G G + Sbjct: 119 LIARKFMFNSPTLFNMYVDGAYGTLSACYVTPVYDDMKAIMDAATVQAMTFKWGGGQGFS 178 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFY----------- 306 +R +R +G + F + + ++ QGG R GA Sbjct: 179 FSELRPRWDIVRSTGGQASGPLSFMQIYDMVTETVKQGGKRRGANMGIMHAWHPDIYNPH 238 Query: 307 -PMWH-------LEVES------------------------------------------L 316 WH ++++ Sbjct: 239 FNPWHALRNMLPPQLKALIDTTKRLIEHLEREGYEIDPVYKEIVMRLSEEGWETVEDAGF 298 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF-------- 368 + K + N + + + V N +L+GED + +P + Sbjct: 299 IQAKEPPLQDAN-LTNFNISVAANDAFMQAILRGEDWWMVNPRYSDSGDGVYRLHYSVSR 357 Query: 369 -------------------------FADQEEFER-----------LYTKYEKDD---SIR 389 F D E + YT +E + Sbjct: 358 ATGLGRLGELLERYPWLLENPYLNIFEDVLEEAKTKALEALKEQARYTGWETSPEQKNPY 417 Query: 390 KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPL 449 + A +L+ +++ ++G + D+ N +P P + V +N C E P P Sbjct: 418 AWKYPARKLWEKIVENAWASGDPGLFFPDNHNKWNPT-PWLGAVYATNPCGE--QPLYPF 474 Query: 450 NDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALDALLDYQDYPIPAAK 504 C L + ++ +L + LAV ++DA++D+ +P P Sbjct: 475 E----------SCNLGSMSIDKYISDGKFDLAQFMSDIQLAVDSMDAVIDFNKHPDPRQT 524 Query: 505 RGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA 564 R +G+G++ A LAK G Y A T A++ Y K S EL + G Sbjct: 525 VANKFTRKIGLGIMGLADALAKLGYPYDSEEAVAFTLIVMAALEVYSWKRSWELGAKLGH 584 Query: 565 CPWFNETTY 573 P F Y Sbjct: 585 APAFECRRY 593 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 66/197 (33%), Gaps = 66/197 (33%) Query: 599 WEALRESIKTHGLR---NSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQV 655 W+ L+ ++ G R N+ ++ + P+ T S I+ ++GIEP V + G +V Sbjct: 715 WKVLKAYGRSLGARAPRNTVMTTVAPTGTISIIAGTSSGIEPYFALVYRRVVAIGEFLEV 774 Query: 656 VPDYEH-----------LHDAYELLWEMPG-------------NDGYLQL---------- 681 V + DA ++++E G + +Q+ Sbjct: 775 VKPFREKLLEAARRYNVPLDAVKVVYETIGRHKGSLRWALGEVREKLIQMGIMNGFLAEV 834 Query: 682 ---------------------VGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 Q ++DQ+IS N ++ L Sbjct: 835 EKLARLFTMSMDFDLWYHLAHQIAAQLYVDQAISKTINL------RKDATKDEVYTAYLV 888 Query: 721 AYKFGVK--TLYYQNTR 735 A+ G+K T+Y ++ Sbjct: 889 AWLGGLKGVTVYRDESK 905 >UniRef50_UPI000155436D hypothetical protein ORF029 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155436D Length = 563 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 123/652 (18%), Positives = 222/652 (34%), Gaps = 159/652 (24%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVA--ACLFSNYPRETRLQYVKRFYDAVSTFK 204 + + KYL + R + YE +A A ++ P + + +F+D + Sbjct: 29 GWQLFKEKYLWEARGLKDTYE-------RIAKTAAQHTDDPDK----WAAKFFDVLWRGW 77 Query: 205 ISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRAL 264 ++ TP++S + T SC DS+D + G G IR Sbjct: 78 LAASTPVLSNMGTIKGMPVSCSGQYIEDSIDGFYSAYHETAMLTKNGFGTSGYLGDIRPR 137 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 GS I +G +P +KHF ++ +QG R GA + P+ H + ++ N Sbjct: 138 GSII-STGGKASGTLPIFKHFVQDMRDVAQGTSRRGAWAGYLPIDHGDFYEIVDYLKN-- 194 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK 384 ++ G +++ RL G+ Sbjct: 195 ----FPDDLNIGWNLSQAFIDRLEVGD--------------------------------- 217 Query: 385 DDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP--FDPAIAPVRQSNLCLEI 442 V AV+ F M +A TG+ Y D N +P + V+ SNLC EI Sbjct: 218 --------VDAVQRFQRAMYVKAITGKGYFFKPDTVNAMNPQVYKDRGLEVKASNLCTEI 269 Query: 443 ALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDAL------LDYQ 496 L + + C LS+ NL + + ++ LD + L Sbjct: 270 TLFS--------DEDHTFTCVLSSMNLEKYDEWKN-TDAVFVSTVFLDCVAQEFIRLAKG 320 Query: 497 DYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASN 556 + R R LG+G + F YL A+ + + F+ + +A+ Sbjct: 321 QKGFEKSVRFTEASRALGLGALGFHTYLQAKMIPLESFEAHMINLEIFQHLHEEATRATK 380 Query: 557 ELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTL 616 +AK G W +G+RN+ L Sbjct: 381 WMAKAWGEPEWCKG--------------------------------------YGVRNTHL 402 Query: 617 SALMPSETSSQIS-NATNGIEPPRGYVSIKASKDGILRQVVPDY-----EHLHDAYELLW 670 A+ P+ +S+ I + GIEP + + + G + +V P + + + EL+ Sbjct: 403 LAIAPNTSSALICGGVSQGIEPVVANLYNQPTSAGEIYRVNPVFLNLAKKRVGWTDELVK 462 Query: 671 EMPGNDGYLQ--------------------------LVGIMQKFIDQSISANTNYDPSRF 704 ++ ++G +Q L Q +I Q+ S N +D + Sbjct: 463 DLIKSEGSVQHLDWLSPKEKAVFKTAYEVDQAALVRLAAARQPYICQAQSINLFFDANE- 521 Query: 705 PSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCES 756 + + Q+ K+ L + +K+LYY T+ G + + + + C Sbjct: 522 --SEAYIAQIHKEALLNPQ--IKSLYYMRTKAGVQAS------KGECEACSG 563 >UniRef50_Q3AEA3 Ribonucleoside-diphosphate reductase n=2 Tax=Bacteria RepID=Q3AEA3_CARHZ Length = 1101 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 113/302 (37%), Gaps = 35/302 (11%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS---NYPRETRLQYVKRFYD 198 + A+K LE +YL +N GE+ E+ + ++ VA + NY + + FY+ Sbjct: 3 KLTENALKVLEARYLARNE-KGEVIETPEEMFWRVARAIAQAEKNYAENDEEEIAREFYN 61 Query: 199 AVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINA 258 ++ TP + P Q S+C ++ GDS++ I G G + Sbjct: 62 FMTALDFLPNTPTLVNAGRPLGQLSACFVLPVGDSMEEIFDAVKYSALIHKSGGGTGFSF 121 Query: 259 GRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLV 318 R+RA G+ +R +G + F K F A ++ QGGVR GA H ++ + Sbjct: 122 SRLRAKGARVRSTGGIASGPVSFMKVFNAATEAVKQGGVRRGANMGVLRCDHPDILEFIT 181 Query: 319 LKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERL 378 K + + + + V + L + + L PS Sbjct: 182 AKE----DNRDITNFNISVALTDKFMKALEEDGEYELIEPST------------------ 219 Query: 379 YTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNL 438 R++A E+F + + G + +D N + P + + +N Sbjct: 220 --------GEVVGRLRAREVFERIARNAWKNGEPGVIFIDRINAANVV-PELGEIESTNP 270 Query: 439 CL 440 C+ Sbjct: 271 CV 272 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 70/317 (22%), Positives = 119/317 (37%), Gaps = 77/317 (24%) Query: 459 IALCTLSAFNLGAIN-----NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTL 513 C L + NL + + + LE+ LAVR LD ++D YP+P ++ R + Sbjct: 624 YESCNLGSINLANMVKDGEIDWEHLEKTVKLAVRFLDNVIDVNHYPLPEIEKMTKKTRKI 683 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTY 573 G+GV+ FA L K Y A NL K E I +AS ELA+ +G P + ++ + Sbjct: 684 GLGVMGFADMLIKLNIPYDSEEALNLADKVMEFINKKSKEASAELARVRGTFPAWKKSVW 743 Query: 574 AKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATN 633 AK L LRN+T + + P+ + S I+ ++ Sbjct: 744 AKKGLK-------------------------------LRNATTTTIAPTGSISIIAGVSS 772 Query: 634 GIEPPRGYVSIKASKD--------------------------------GILRQVVPDYEH 661 GIEP + D G + + E Sbjct: 773 GIEPVFALAFKRHILDRKDIVEVHRLFEQHARENGYYSEKLMNEVAKTGRITGIAGVPEE 832 Query: 662 LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTA 721 + ++ + ++++ + QK D ++S N S ++ + + L A Sbjct: 833 AKRLFVTALDI-APEWHVKMQAVFQKHTDNAVSKTINMPNS------ATVEDVKESYLLA 885 Query: 722 YKFGVK--TLYYQNTRD 736 YK G K T+Y +R+ Sbjct: 886 YKLGCKGLTVYRDGSRE 902 >UniRef50_UPI00019240FD PREDICTED: similar to ribonucleotide-diphosphate reductase large subunit, putative, partial n=1 Tax=Hydra magnipapillata RepID=UPI00019240FD Length = 416 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 101/398 (25%), Positives = 165/398 (41%), Gaps = 62/398 (15%) Query: 391 QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN 450 +++KA +L+ +++ ++ TG YI D+ N S + +R SNLC EI + Sbjct: 3 RQIKARDLWRHILEAQSETGFPYILYKDNSNIKSN-QKNLGTIRSSNLCAEIIQYS---- 57 Query: 451 DVNDENGEIALCTLSAFNLG---------AINNLDELEELAILAVRALDALLDYQDYPIP 501 + E A+C L++ L I N D+L ++ +AVR LD ++D YP Sbjct: 58 ----DEHETAVCNLASICLPMFIETNNNVKIYNFDKLGKVCRVAVRNLDKIIDRNYYPTE 113 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 KR + R +GIG A G +S SA L K FE I + + S ELAK+ Sbjct: 114 KTKRSNLRHRPMGIGAQGLADVYNIMGFGFSTHSAYELNKKIFETIYFACIDESKELAKK 173 Query: 562 QGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMP 621 G F + ++G L + + D + + +DW+ L +K +GLRNS L+ALMP Sbjct: 174 FGQYSTFKGSPASQGQLQFHMWGFNEDQLL---MGFDWKTLISEVKKYGLRNSLLTALMP 230 Query: 622 SETSSQISNATNGIEPPRGYVSIKAS--------------------------------KD 649 + ++SQI + IEP + +++ ++ Sbjct: 231 TASTSQIMGNSECIEPYMSNIFKRSTLAGEFIVINKHLMKDLIHLNLWNDDMRKRIIIEN 290 Query: 650 GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKV 709 G ++ + E L + YE +E ++ FIDQS S N F Sbjct: 291 GSVQNIELIPEKLKNVYETAFETK-QMHIVRQSADRGIFIDQSQSLNLFMAEPDF----- 344 Query: 710 PMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLV 746 L L ++ G KT +YY + + Sbjct: 345 --DVLTSALFESHDIGNKTGMYYYRSLPAINPISFGID 380 >UniRef50_C1F6S8 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6S8_ACIC5 Length = 1083 Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 121/768 (15%), Positives = 215/768 (27%), Gaps = 192/768 (25%) Query: 115 YDNHLLEDYTEEEFKQMDTFIDHDRDM----TFSYAAVKQLEGKYLVQNRVTGEIYES-A 169 YD E T I +D+ +S A + KYL + ES Sbjct: 42 YDEVQWESRTAAITDAAGKTIFEQKDVEIPVDWSMTATNIVASKYL-HGPLNTPERESGV 100 Query: 170 QFLYILVAA-----CLFSNY--PRETRLQYVKRFYDAVSTFKISLPTPIMSG-------- 214 + L VA + Y E + + T K + +P+ Sbjct: 101 RQLVSRVAETVRDWGIKGGYFASEEDAAIFHDELAHLLITQKAAFNSPVWFNVGCDRLEP 160 Query: 215 --------------------VRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGI 254 Q S+C + DSLDSI + +G Sbjct: 161 KSDAQNWHWNPHTCAVEFSVTGYRNPQCSACFINAVDDSLDSILTLAKTEGMLFKWGSGT 220 Query: 255 GINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEV 313 G N IR + GG +G + F + F GG R A + + H ++ Sbjct: 221 GTNLSPIRGSMEQLSGG-GTASGPLSFMRGFDAFAGVIKSGGKTRRAAKMVILNVDHPDI 279 Query: 314 ESLLVLKNNRGVEGNRV---------------------RHMDYGVQINKLMYTRLLKGED 352 + K + + ++ + V++N + K + Sbjct: 280 VDFIECKMKEEAKAWALMREGYDGSSGPDSEAYSSIFFQNANNSVRVNDEFMRAVEKDGE 339 Query: 353 ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRI 412 T + D + + KA E+ + + G Sbjct: 340 FTTRTVKDGAAV--------------------------KTYKAREIMHKIAEATWQCGDP 373 Query: 413 YIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI 472 +Q N + SN C E + + C L++FNL Sbjct: 374 GMQYDSTINRWHT-SKNSGRINASNPCSEYMF------------LDNSACNLASFNLLKF 420 Query: 473 ------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAK 526 ++ + + A++ L+D YP R + R LG+G N L Sbjct: 421 MTPAGTFDIRAYRHAIDVLITAMEILVDNSGYPTENIARNSHDYRPLGLGYANLGALLMA 480 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAK---------------EQ--GACPWF- 568 G Y + + + S+ +A+ E+ GACP F Sbjct: 481 LGLPYDSDAGRDFAATLTAIMCGEAYLQSSRIAEKCPPLASATPLTASVERNGGACPGFY 540 Query: 569 ---------------NETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 K + +K W+ + +G RN Sbjct: 541 VNREPFLDVIRMHRAEVNKIGKSKTSSEPFKVPELDALITASKECWDQALAHGEKYGYRN 600 Query: 614 STLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPD-------------- 658 S ++ L P+ T + + T GIEP V K G + ++V + Sbjct: 601 SQVTVLAPTGTIGFMMDCDTTGIEPDLALVKYKKLVGGGMIKIVNNTVPAALFKLGYKNE 660 Query: 659 ----YEHLHDAYELLWEMPGND-----------------------GYLQLVGIMQKFIDQ 691 DA + PG G+++++ Q F+ Sbjct: 661 DVDAIVSYIDATGTIEGAPGIKPEHLAVFDCSFKPAKGTRSIHYLGHIKMMAATQPFLSG 720 Query: 692 SISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDG 737 +IS N + + + L +++ G+K +Y ++ Sbjct: 721 AISKTVNMPH------DSNIDDIAEAYLESWRQGLKAVAIYRDGSKGA 762 >UniRef50_D1JF25 Ribonucleoside-diphosphate reductase n=1 Tax=uncultured archaeon RepID=D1JF25_9ARCH Length = 919 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 120/329 (36%), Gaps = 38/329 (11%) Query: 117 NHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV 176 ++ + + + + D+ S A + L+ +YL+++ + + E+ ++ V Sbjct: 4 PYISYHQQRADIQGLKKLLSDKSDLNLSANAAEVLKRRYLLKDELE-RVIETPSQMFARV 62 Query: 177 AACLFSNYPRETRLQYV-----KRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG 231 A + + + +RFY + + + +P + T Q ++C +I Sbjct: 63 AKAIARAEQNYGKSKAEVKKIEQRFYLLMHSLEFLPNSPTLMNAGTDLGQLAACFVIPVE 122 Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS 291 DS++ I + + G G + R+R G ++ +G + F + F A Sbjct: 123 DSIEGIFGAVKDMARIHQSGGGTGFSFSRLRPKGDVVKSTGGVASGPVSFMRVFDVATDV 182 Query: 292 CSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 QGG R GA H ++ + K E + + V + + + E Sbjct: 183 IKQGGKRRGANMGIICADHPDILEFIRAK-----ERGEFANFNTSVAVTDEFMHAVDRNE 237 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR 411 + L +P + +++KA E+F+ ++ G Sbjct: 238 EYELINPRTKEEV--------------------------RKIKAGEVFNEIVTYAWKIGD 271 Query: 412 IYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 I +D N H+P A+ + +N C+ Sbjct: 272 PGIIFLDEINRHNPV-SAVGRIEATNPCV 299 Score = 224 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 79/436 (18%), Positives = 149/436 (34%), Gaps = 106/436 (24%) Query: 369 FADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR--IYIQNVDHCNTHSPF 426 F+D E+ E+L +R E F ++E G +Y + N F Sbjct: 544 FSDIEKMEKLENAIRN-----YKRKMNRERFVASVEEVVPDGVEKVYDVQIPGINA---F 595 Query: 427 DPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEEL 481 D V C E P P + C L + N+ + + L+E Sbjct: 596 DANGFIVHN---CGE--QPLLPYD----------SCNLGSINVSKFVENGEIDWERLKEA 640 Query: 482 AILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTH 541 +VR LD ++D YP+ ++ R +G+G++ A L K Y A + Sbjct: 641 VWSSVRFLDDVIDENRYPLSKIEKMTKANRKIGLGIMGLAELLIKLKIAYDSKDAVLMAE 700 Query: 542 KTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEA 601 K + I + S EL E+G+ P F + ++ D Sbjct: 701 KLMQFITNEARQCSTELGLEKGSFPNFELSVWST----YDA------------------- 737 Query: 602 LRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGIL--------- 652 +RN+T++ + P+ T I N ++GIEP ++ G+L Sbjct: 738 ---------MRNATVTTIAPTGTIGIIGNCSSGIEPLFAVAFVRNVMGGMLEINKLFEEI 788 Query: 653 ---------------------RQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQ 691 + + E + + ++ + ++++ Q++ D Sbjct: 789 AKEKGFYSKELIAEIAKRGSIQDIAGIPEDIKRVFVTALDI-SPEWHVRMQAAFQRYTDN 847 Query: 692 SISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSI 749 ++S N + + L AYK K T+Y ++G + + + Sbjct: 848 AVSKTVNLP------SDATRGDVKRVFLLAYKLKCKGVTVYRYGCKEGILSLEVPKL-ML 900 Query: 750 QDDGCE----SGACKI 761 ++ C +G C+I Sbjct: 901 EEYVCADSEYTGECRI 916 >UniRef50_UPI0001923DF2 PREDICTED: hypothetical protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI0001923DF2 Length = 472 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 81/350 (23%), Positives = 134/350 (38%), Gaps = 29/350 (8%) Query: 39 SQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFE 98 + + IQ I + I + + A+ I + P Y + A+L ++ K Sbjct: 151 NNIVQEHDIQI--DITNTFILNFLKEFIAE-IKEEFPKYLLITAKLLQENIDKN--NDMS 205 Query: 99 PPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQ 158 P + ++ +++ I +DRD F Y +K LE YL + Sbjct: 206 P--------------ILSDETFNIISKYH-RRLQNSIRYDRDYLFDYFGIKTLERSYLYK 250 Query: 159 NRVTG-EIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRT 217 T +I E Q + + VA + + V YD +S + TP + T Sbjct: 251 LHFTKFKIIERPQHMIMRVAIGIHG-----EDIDSVIETYDLISQKYFTHATPTLFNAGT 305 Query: 218 PTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTG 277 Q SSC L D+++SI I GIG++ +R GS IRG +G Sbjct: 306 RRAQMSSCFLQAIDDNIESIFEAVRDIAFTSKWAGGIGVHMSALRCRGSLIRGTNGIASG 365 Query: 278 CIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGV 337 +P K +QGG R G+ + H ++ L+ N G + +R R + + Sbjct: 366 VVPLCILLNKLAKYINQGGRRNGSIACYLEPHHADIFDFCDLRKNTGNDDDRARDLYLAL 425 Query: 338 QINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS 387 + L R+ +L P PGL EE+ +LY YE + + Sbjct: 426 WVPSLFMKRVRDDLTWSLMCPDQCPGLNKVH---SEEYVKLYEMYESEGN 472 >UniRef50_D1ABC6 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=3 Tax=Actinomycetales RepID=D1ABC6_THECD Length = 1370 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 95/509 (18%), Positives = 173/509 (33%), Gaps = 54/509 (10%) Query: 143 FSYAAVKQLEGKYLV-------QNRVTGEIYESAQFLYI--LVAACLFSNYPRETRLQYV 193 +S AV + KY + ++ + +Y+ A F++ + Sbjct: 65 WSVNAVNIVTSKYFRGAVGTPEREWSLKQLVDRVVKVYVDTGKAHGYFASDEDAEIFDHE 124 Query: 194 KRFYDAVSTFKISLPTPIMSGVRTPTR-QFSSCVLIECGDSLDSINATSSAIVKYVSQRA 252 ++ A+ S +P+ V T + Q S+C ++ D+++SI + Sbjct: 125 LKY--ALIHQIFSFNSPVWFNVGTKSPWQVSACFILSVDDTMESILDWYKEEGIIFKGGS 182 Query: 253 GIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHL 311 G G+N RIR+ + G +G + F + + + GG R A + + H Sbjct: 183 GAGLNLSRIRSSKELLSSG-GTASGPVSFMRGADASAGTIKSGGATRRAAKMVVLDVDHP 241 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLF---SPSDVPGLYDAF 368 ++E + K + +R + L G+DIT + ++ + D F Sbjct: 242 DIEEFIWTKAREEDKIRALR---------DAGFDMDLGGKDITSVQYQNANNSVRVSDEF 292 Query: 369 FADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 E E + + + V+A +LF M Q IQ D N +P Sbjct: 293 MRAVENDEEFGLRARLTGEVIE-TVRARDLFRAMAQAAWECADPGIQYDDTINDWHT-NP 350 Query: 429 AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------NNLDELEELA 482 + SN C E + + + C L++ NL ++ +L Sbjct: 351 ETGRITASNPCSEYM------------SLDNSSCNLASINLLKFLREDDTFDITRFVKLT 398 Query: 483 ILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHK 542 L + A+D + + D+P R LGIG N L G Y +L Sbjct: 399 ELIITAMDISITFADFPTEKIAETTRAYRQLGIGYANLGALLMATGHAYDSEGGRSLAAA 458 Query: 543 TFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYK--------KDLDTIANEP 594 + + S ELA GA + A + +++D + Sbjct: 459 ITSLMTATAYRRSAELAGIVGAYDGYARNAEAHKRVMRKHAAANDQLRPLEEMDKAIHAE 518 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSE 623 W + +G RN+ S L P+ Sbjct: 519 ATRQWSQCLALGEKNGYRNAQASLLAPTG 547 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 45/154 (29%), Gaps = 46/154 (29%) Query: 624 TSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPD------------------------ 658 T + + T GIEP K G ++V Sbjct: 978 TIGLMMDCDTTGIEPDLALKKFKKLVGGGSMEIVNHTVPRALRKLGYQQEQVEAIVEYIS 1037 Query: 659 --------YEHLHDAYELLW-----EMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 + YE+ G+++++ +Q F+ +IS N Sbjct: 1038 EHGHVVDAPGLRPEHYEVFDCAMGERAISPMGHIRMMAAVQPFLSGAISKTVNMP----- 1092 Query: 706 SGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDG 737 ++ + K +K G+K +Y N + G Sbjct: 1093 -EHATVEDIEKVYFEGWKMGLKALAIYRDNCKVG 1125 >UniRef50_D1C7D7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7D7_SPHTD Length = 1139 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 90/534 (16%), Positives = 155/534 (29%), Gaps = 85/534 (15%) Query: 186 RETRLQYVKRFYDAVSTFKISLPTPIMSGVRT---------------------------- 217 E + + + +P Sbjct: 135 EEDAQAFEDELKYMLVHQMAAPNSPQWFNTGLYYAYGITGPAQGHSYIDPDTGELKYSQD 194 Query: 218 --PTRQFSSCVLIECGDSL---DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGE 272 +C + D L I + + +G G N +IRA G P+ GG Sbjct: 195 AYSRPTPHACFIQSVEDDLVNPGGIFDLVTREARVFKYGSGSGTNFSKIRAEGEPLSGG- 253 Query: 273 AFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVR 331 +G + F K F A + GG R A + + H ++E+ + K + + Sbjct: 254 GTSSGLMSFLKIFDRAAGAIKSGGTTRRAAKMVVVDVDHPDIEAFINWKAEEEKKVAALI 313 Query: 332 HMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQ 391 Y N Y + + + ++ + D F + ++ D I K Sbjct: 314 AAGYSADFNGEAYATV------SGQNSNNSVRVTDEFIRAVLTDGEWHLRWRTDGRIAK- 366 Query: 392 RVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLND 451 V+A +L+ + Q +Q N PA + SN C E Sbjct: 367 TVRARDLWHQIAQAAWQCADPGVQFDTTINAWHTC-PASGRINASNPCSEYMF------- 418 Query: 452 VNDENGEIALCTLSAFNLGAI-------NNLDELEELAILAVRALDALLDYQDYPIPAAK 504 + C L++ NL +++ L L+ + +P A Sbjct: 419 -----LDDTACNLASLNLMKFYDAERRTFDIERFRHAVRLWTIVLEISVLMAQFPSEAIA 473 Query: 505 RGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA 564 R + RTLG+G N L G Y A + + AS E+A G Sbjct: 474 RKSYEFRTLGLGYANLGSMLMTMGLPYDSDRARGIAAAVTAIMTGEAYAASAEMASVLGP 533 Query: 565 CPWFNETTYAK----------------------GILPIDTYKKDLDTIANEPLHYDWEAL 602 P F E + P+ + W+ Sbjct: 534 FPAFAENREHMLRVIRNHRRAAYNAHPGEYEGLSVAPVGLDPATCPEDLVQAAREAWDRA 593 Query: 603 RESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQV 655 + +G RN+ + L P+ T + + T G+EP V K G ++ Sbjct: 594 LAMGEQYGYRNAQTTLLAPTGTIGLLMDCDTTGVEPDFALVKFKKLAGGGYFKI 647 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 12/78 (15%) Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL--YYQNT 734 G+++++ +Q F+ +IS N +V ++ + + + +++ G+K + Y Sbjct: 800 GHIRMMAAVQPFLSGAISKTINMP------NEVTVEDIEEAYMASWRLGLKAMALY---- 849 Query: 735 RDGAEDAQDDLVPSIQDD 752 RDG++ +Q S QD Sbjct: 850 RDGSKLSQPLSSASKQDQ 867 >UniRef50_B9L1R5 B12-dependent ribonucleoside diphosphate reductase n=2 Tax=Bacteria RepID=B9L1R5_THERP Length = 1122 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 97/507 (19%), Positives = 155/507 (30%), Gaps = 98/507 (19%) Query: 224 SCVLIECGDSL---DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIP 280 +C + D L I + AG G N +IRA G P+ GG +G + Sbjct: 195 ACFIQSVEDDLVNPGGIFDLVLREARVFKYGAGSGTNFSKIRAEGEPLSGG-GTSSGLMS 253 Query: 281 FYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRV--------- 330 F K F A + GG R A + + H ++E + K + + Sbjct: 254 FLKVFDRAAGAIKSGGTTRRAAKMVVVDIDHPDIEKFIRWKAEEEKKVAALVAAGYSADF 313 Query: 331 ----------RHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 ++ + V++ +L+ D L Sbjct: 314 NGEAYATVSGQNSNNSVRVPDEFIRAVLEDRDWHL------------------------- 348 Query: 381 KYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 ++ D I K V+A EL+ ++ + IQ N PA + SN C Sbjct: 349 RWRTDGRIAK-TVRARELWQMIAEAAWQCADPGIQYDTTINDWHTC-PASGRINASNPCS 406 Query: 441 EIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDE-------LEELAILAVRALDALL 493 E + C L++ NL + L L+ + Sbjct: 407 EYMF------------LDDTACNLASLNLLKFYDAKSGRFDIAAFRHAVRLWTIVLEITV 454 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 YP + RTLG+G N L G Y A + + Sbjct: 455 LMAQYPSREIAWNSYRFRTLGLGYANLGSLLMTMGLPYDSDRARAVAAAITAIMTGEAYA 514 Query: 554 ASNELAKEQGACPWFNETTYAKGIL-------PIDTYKKDLDTIANEPLHYD-------- 598 S E+A G P F E + D + ++ + + P D Sbjct: 515 TSAEMAAILGPFPAFPENREHMLRVIRNHRRAAYDAHPEEYEGLHIAPQGLDATHCPPEL 574 Query: 599 -------WEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDG 650 W+ E + G RN+ + L P+ T + + T GIEP V K G Sbjct: 575 VAAAREAWDRALELGERFGYRNAQATLLAPTGTIGLLMDCDTTGIEPDFALVKFKKLAGG 634 Query: 651 -----ILRQVVPDYEHLHDAYELLWEM 672 + R V P E L E + ++ Sbjct: 635 GYFKIVNRSVAPALERLGYTPEQIQDI 661 Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRD 736 G+++++ +Q F+ +IS N +V ++ + ++ G+K L RD Sbjct: 792 GHIRMMAAVQPFLSGAISKTINMPH------EVTVEDVANAYFEGWRLGLKALAIY--RD 843 Query: 737 GAEDAQDDLVPSIQDDGCESGA 758 G++ +Q S + + E + Sbjct: 844 GSKLSQPLSTRSSEKEKSERAS 865 >UniRef50_Q97K72 Ribonucleotide reductase, vitamin B12-dependent n=2 Tax=Clostridiales RepID=Q97K72_CLOAB Length = 987 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 131/822 (15%), Positives = 246/822 (29%), Gaps = 215/822 (26%) Query: 86 IFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSY 145 + L K+ Y + + V + + K D +++ T + M D + +S Sbjct: 4 LKILFKRFYTKELESSKTKTVYDLFKWKKVDVKIIDHKTGKVLTDMK---DLEFPYDYSQ 60 Query: 146 AAVKQLEGKYLVQNRVTGEI-YESAQFLYILVAACLFSNYPRETRLQYVKR-------FY 197 A + KY ++ + E YE++ + VA L S + + + + + FY Sbjct: 61 NACDIIASKYFKKSGIPNECGYENSMKM---VAHRLVSFWCEALKDEGIIKTENEASIFY 117 Query: 198 D----AVSTFKISLPTPIMSGVRTP------------------------------TRQFS 223 D A+ + +P Q S Sbjct: 118 DELVYALLNQMYAPNSPQWFNTGLSLIYGINGEAQGHFYYDSKEKKVLQSKDSYTRTQAS 177 Query: 224 SCVLIECGDSL---DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIP 280 +C +I D L SI+ K +G G N IRA G + GG +G + Sbjct: 178 ACFIISIEDKLLGSHSISEQYVTETKLFKGGSGTGTNFSTIRAKGEKLSGG-GISSGLMS 236 Query: 281 FYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRV--------- 330 F K + GG R A L + H E+ + K + + Sbjct: 237 FLKGLDRNAGAIKSGGTTRRAAKMLCLNVDHPEIMDYITWKAKEEDKVKALGKMGYDASF 296 Query: 331 ----------RHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 ++ + V ++ ++ ++ +P + L + + E++ Sbjct: 297 EGEAYETVSGQNANNSVMLSDEFMKKVCNLKN----NPDETIELKGRVDSSVNKVEKI-- 350 Query: 381 KYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS--------PFDPAIAP 432 L+ + D N F+ Sbjct: 351 ---------------SNLWEAFNKSSWRCADPSPLFSDTLNAWHTCPGGEDGNFNADYNK 395 Query: 433 VRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-------NNLDELEELAILA 485 + +N C E A + C L++ NL +L+ + + L Sbjct: 396 INSTNPCGEYAF------------LDDTSCNLASINLYKFYDTENKTFDLEGYKHVIGLV 443 Query: 486 VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFE 545 L+A + + +P R RT G+G+ N A L G Y ++ Sbjct: 444 QLLLEASIHWGQFPTEDVARKTHMFRTTGLGISNLAALLMVMGYPYDSEEGRAISSSLIG 503 Query: 546 AIQYYLLKASNELAKEQGACPW-------------------------FNETTYAKGILPI 580 + Y S+ +AKE GA F + Y ++ Sbjct: 504 VLTGYSYYISSLMAKEVGAFEKYNINKEHMLKVLRNSARAAGSIDTPFEKIGYKPLVVNH 563 Query: 581 DTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPR 639 +K+ + L W + ES + +G RN+ +S + P+ T S + + +EP Sbjct: 564 SILEKEDLRYISSELKNSWNSALESGEKYGFRNAQVSVMAPTGTISFAMDCASTSVEPFF 623 Query: 640 GYVSIKASKDG------------ILRQVVPDYEHLHDA-----------------YELLW 670 +V K G L+ + + D YE + Sbjct: 624 SHVIYKKLSGGGYMTLTNPLIQESLKHLGYSENEIEDITNYILRKKKVKTDDGTEYETIL 683 Query: 671 E----------------------------MPGNDGYLQLVGIMQKFIDQSISANTNYDPS 702 + G++ +V + I S+S N Sbjct: 684 DGKIEGAPHLKKEHLAIFDTANKCGSGNRFISPMGHILMVASIVPLISGSVSKTVNLPK- 742 Query: 703 RFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQ 742 ++ ++ ++K GVK TLY RD ++++Q Sbjct: 743 -----DASVEDFKNVIINSWKLGVKGITLY----RDSSKESQ 775 >UniRef50_C4XRN9 Ribonucleoside-diphosphate reductase n=2 Tax=Desulfovibrio RepID=C4XRN9_DESMR Length = 1096 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 114/296 (38%), Gaps = 37/296 (12%) Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQY-----VKRFYDAVSTFK 204 L +YL ++ G E Q L+ VA + S + + ++FYD + + Sbjct: 3 VLSKRYLKKSP-EGAPEEDVQGLFWRVAGAIASEEAKYAASPWQPEALARKFYDLMVGMR 61 Query: 205 ISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRAL 264 +P + TP Q ++C ++ GDS+D I G G + R+R Sbjct: 62 FLPNSPTLMNAGTPLGQLAACFVLPVGDSMDEIFDAVKFAALIHKSGGGTGFSFSRLRPK 121 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 S + +G + F + F TA + QGG R GA + H ++ + K G Sbjct: 122 KSRVGSTGGVASGPVSFMRIFNTATEQVKQGGTRRGANMGILRIDHPDILEFIACKEREG 181 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK 384 + + + V + + + KGED L P D Sbjct: 182 E----LTNFNISVALTERFMQAVEKGEDYDLIDPRD------------------------ 213 Query: 385 DDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 ++ + A E+F+L++++ +G I +D N +P PA+ + +N C+ Sbjct: 214 --GSKRGSLSAPEVFALLVRKAWESGDPGIVFLDRINRDNP-TPALGAIESTNPCV 266 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 72/335 (21%), Positives = 111/335 (33%), Gaps = 84/335 (25%) Query: 449 LNDVNDENGEIAL-----CTLSAFNLGAINN--------LDELEELAILAVRALDALLDY 495 V GE L C L + NL + L E LAVR LD ++D Sbjct: 630 CGLVAHNCGEQPLLPYEACNLGSINLSVFYDPSAPDGIDWAGLAETVHLAVRFLDNVIDA 689 Query: 496 QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKAS 555 YP+ R +G+GV+ FA L Y A L K E +Q AS Sbjct: 690 SRYPLDQITEMVRANRKIGLGVMGFADLLYLLRIPYDSTEALTLAEKLMETVQAEARSAS 749 Query: 556 NELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNST 615 LA E+GA P + E+ Y K L RN+T Sbjct: 750 KTLAAERGAFPAYPESIYGKRNLGP------------------------------YRNAT 779 Query: 616 LSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI------------------------ 651 + + P+ T S I+ ++GIEP + DG Sbjct: 780 TTTIAPTGTLSIIAGCSSGIEPLFALSFARHVMDGEKLVEANPHFVTALREAGAHSDALM 839 Query: 652 --------LRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSR 703 + + E L + + ++ +L++ QK+ D ++S N S Sbjct: 840 EEVTRKGSIAHIGLLPEALREVFVTAMDIEPV-WHLKMQAAFQKYTDNAVSKTVNLPNS- 897 Query: 704 FPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 +++ + AY+ G K T+Y + Sbjct: 898 -----ATKEEIREIYWLAYELGCKGVTVYRDGCKS 927 >UniRef50_O26748 Ribonucleoside-diphosphate reductase n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26748_METTH Length = 703 Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 115/301 (38%), Gaps = 38/301 (12%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKR--FYDA 199 + S A+K LE +YL++ GE+ E+ + ++ VA + S V FY Sbjct: 3 SLSTTALKVLEERYLLRGE-GGEVVETPEEMFRRVARAVASADEAYGDDPAVAEEAFYSV 61 Query: 200 VSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAG 259 + + +P + TP Q S+C ++ DS+DSI ++ + G+G + Sbjct: 62 MGNLEFLPNSPTLMNAGTPINQLSACFVLPVEDSIDSIFSSLRDMAIIHKSGGGVGFSFS 121 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 R+R G + +G + F + F AV QGG R GA + H ++ S + Sbjct: 122 RLRPRGDIVASTMGVASGPVSFMRIFDVAVDVIKQGGRRRGANMGVLHVSHPDIFSFIDA 181 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 K+ G +R+ + V + + L +P + + Sbjct: 182 KSREGP----LRNFNLSVAVPDEFM----DDRPVDLINPRNGEVVD-------------- 219 Query: 380 TKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLC 439 V++ + +++ +G I D N ++P P + + +N C Sbjct: 220 ------------SVESRVILKRIVEAAWRSGDPGILFEDRINRYNP-TPQLGRIEATNPC 266 Query: 440 L 440 + Sbjct: 267 V 267 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 116/326 (35%), Gaps = 77/326 (23%) Query: 450 NDVNDENGEIAL-----CTLSAFNLGAIN-----NLDELEELAILAVRALDALLDYQDYP 499 + GE L C L + NL + N ++L +AV LD ++D YP Sbjct: 394 GFIVHNCGEQPLLTHESCNLGSVNLSLMVGPSGINWEKLRRTIHVAVHFLDNVIDVNSYP 453 Query: 500 IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELA 559 + + + R +G+GV+ FA L K G Y+ +A + + I +AS ELA Sbjct: 454 LRPVEEMTLRTRKIGLGVMGFADMLIKLGIPYNSVAALEVAGRVMSFISSEARRASMELA 513 Query: 560 KEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSAL 619 +E+G+ P F + + +RN+TL+ + Sbjct: 514 RERGSFPEFKGSIWDIQGFEC------------------------------MRNATLTTI 543 Query: 620 MPSETSSQISNATNGIEPPRGYVSIKASKD----------------------------GI 651 P+ + S I+ ++GIEP + G Sbjct: 544 APTGSLSIIAGTSSGIEPLFAVSFTRNILGRSFHELHPLFKTMAGRLDKRSLEAIESRGS 603 Query: 652 LRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPM 711 LR V + + E+ ++++ Q+++D ++S N P Sbjct: 604 LRGVPGVPARIRRLFVTAHEIDPVF-HVKMQAAFQRYVDNAVSKTVNLPADSSP------ 656 Query: 712 QQLLKDLLTAYKFGVK--TLYYQNTR 735 + + A++ G K T+Y ++ Sbjct: 657 ADVERVFRAAHELGCKGVTVYRYGSK 682 >UniRef50_A7IYE5 Putivate ribonucleotide reductase n=5 Tax=root RepID=A7IYE5_9CAUD Length = 865 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 76/357 (21%), Positives = 145/357 (40%), Gaps = 11/357 (3%) Query: 85 AIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFS 144 + H+ K DH+ + V+ +D ++ Y E+ K++ + + Sbjct: 35 FLEHVNKNTVFFHSLEEKVDHLTEEVQ--LWDKDVVLRYGFEDLKRLMKQAYGHKFRFKT 92 Query: 145 YAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFK 204 Y + Y ++ YE + +L A ++ + D + Sbjct: 93 YMGALKFYNSYALKTNDGKRYYERYEDRVVLTAIHY------SEDFEHAESLVDLIIKGI 146 Query: 205 ISLPTPIMSGVRT-PTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRA 263 TP + SC +++ D++ SI ++ + G+GI +R Sbjct: 147 FQPATPTFLNAGLLDAGKPVSCFILDVQDTMGSIGRIVQDSLQLSKRGGGVGIGFSNLRE 206 Query: 264 LGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNR 323 G+PI+G E +G IP K + + +Q G R GA ++ H ++ + L K Sbjct: 207 AGAPIKGREGQASGVIPVMKILEDSFSYSNQLGARQGAGAVYLNAHHPDILAFLDTKREN 266 Query: 324 GVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE 383 E R++ + GV + + + + E + LFSP D+ +Y ++ E +Y + Sbjct: 267 ADEKIRIKTLSLGVIVPDVTFRLAKESEPMALFSPYDINKVYGKSLSEFSVTE-MYDTWL 325 Query: 384 KDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 KDD I K + A +LF + + + +G Y+ D N +P P I ++ SNLC+ Sbjct: 326 KDDRIAKTFIDARKLFQTIAEVQFESGYPYLMFDDAANRGNPA-PNIGRIKSSNLCV 381 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 68/340 (20%), Positives = 136/340 (40%), Gaps = 34/340 (10%) Query: 439 CLEIALPTKPLNDVNDE----NGEIALCTLSAFNLGAIN--NLDELEELAILAVRALDAL 492 C EI P+ P D G C L + N+ ++ + D+ A + L+ + Sbjct: 539 CSEIFQPSSPSEFSEDSFFTKTGRDISCNLGSLNVARLSALDTDDFHTAVKDAYKFLNQV 598 Query: 493 -LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYL 551 + + P RG R +G+G +N L + G Y+ A + + + + Sbjct: 599 AVQTEIGSSPTVVRGNRESRAIGLGQMNLHGALIELGLDYNSQEARDWFEWYMMRVTFSV 658 Query: 552 LKASNELAKEQGA-CPWFNETTY--------AKGILPIDTYKKDLDTIANEPLHY--DWE 600 + AS + A+E G+ + + + + ID + + N + + +W Sbjct: 659 ISASVDKAEEMGSGFKGAEGSRWGDIISGHRDRAMALIDRITASGNAMENSDVAWSYEWL 718 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE 660 L E + HG+ N L A+ P+ + S I++AT I P V ++ + + R P Y Sbjct: 719 RLLERFRLHGIYNQNLQAIPPTGSISYINHATASIHPVTSPVEVRK-EGKLGRVYYPQYG 777 Query: 661 HLHDAYELLWE--MPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDL 718 ++ E + G + + + + ++DQ +S + + + + + Sbjct: 778 VTNENVESIDSAYAIGPNPIIDMYAVASPWVDQGMSLTLFFPDT------ATTRDINRAQ 831 Query: 719 LTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 + A+K G+K+LYY T + + + +GC S A Sbjct: 832 IYAHKKGLKSLYYIRTSAKSVEGT-------EVEGCLSCA 864 >UniRef50_Q18GD3 Ribonucleoside-diphosphate reductase n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18GD3_HALWD Length = 1909 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 85/497 (17%), Positives = 158/497 (31%), Gaps = 115/497 (23%) Query: 228 IECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQT 287 I D+ + + + + G+G ++R G + +G I F + + Sbjct: 592 ITVADN----HEYVTDGIISHNSGGGMGYAFWKLRPYGDSVGSTGGIASGPITFMRTYDQ 647 Query: 288 AVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVR---------------- 331 ++ +QGG R GA + H +V + KN + +R Sbjct: 648 MCETIAQGGARRGAQMGVMRISHPDVIQFIHAKNKDVSLAHSLRLNDPDDFTHTSFADAL 707 Query: 332 --------------------------HMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLY 365 + + V + L E+ T +P Sbjct: 708 EEARELIDEEGRVPEHLRNAVEGHLSNFNISVGVTDEFMEALFADEEFTFTNPR-----T 762 Query: 366 DAFFADQEEFERLYTKYEKDDSI---RKQRVKAVELFSLMMQERASTGRIYIQNVDHCNT 422 + E + LY ++ + + + V A EL+ ++ G + ++ N Sbjct: 763 EDPHIATPETKELYELHDLGEHVEVGEELSVPAEELWDHIVSGAHENGEPGVIYLERVNK 822 Query: 423 HSPFD---PAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG--------- 470 FD + + +N C E L E C L NL Sbjct: 823 EHSFDVEKHSEHEILATNPCGEQPL------------EEYEACNLGHINLSTLADKDAPD 870 Query: 471 ----------AINNLDELEEL--------------AILAVRALDALLDYQDYPIPAAKRG 506 A NNLD+ E R L+ ++ D+P+ + Sbjct: 871 WRVWYDNNGDAYNNLDDAAEAFIYEAIDMNAFNRRIESGTRFLENVVTMSDFPVDEIEAT 930 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 R +G+G++ A + G RY AN + + I + AS+ELAKE+G Sbjct: 931 VRDMRKIGLGIMGLAQLYIQIGVRYGSQEANAIAEQLMTHINHESKWASHELAKERGTFN 990 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSE--T 624 + E+ YA + ++ A+E WE +RN + + P+ Sbjct: 991 DWTESKYANPTEYREWFEHHTGLDASE-----WED------GFLIRNHNTTTIAPTGCVE 1039 Query: 625 SSQISNATNGIEPPRGY 641 + + + G+ P + Sbjct: 1040 ENSLVSTDEGLRPIKDL 1056 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 20/57 (35%) Query: 193 VKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVS 249 F D +S +P + +Q S+C + D + I+ T+ + Sbjct: 145 ADEFEDLMSRLSFMPNSPTLMNAGDELQQLSACFVDSPSDDISDIHQTAKEAAEVFQ 201 >UniRef50_Q19CR5 Ribonucleotide reductase A subunit n=3 Tax=unclassified T4-like viruses RepID=Q19CR5_9CAUD Length = 570 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 124/661 (18%), Positives = 221/661 (33%), Gaps = 164/661 (24%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVST 202 F+ Y + E+ + + VA+ L + R + +R++D + + Sbjct: 27 FTTQGYSMFLKNYQYKG-------ETVRGAFRRVASTLA---KHDIRPEAEERYFDLLWS 76 Query: 203 FKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR 262 K+++ TP+ T SC GDS+ + + G G IR Sbjct: 77 GKLAMATPVFCNTGTDRGMPVSCAGSYVGDSVLDFYEGQTEVAMLAKNGFGTASYLGDIR 136 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 GS I G +P + +F + G R G + H + L Sbjct: 137 PRGSDISTSHNKADGLVPVFDNFVNTKTKVAAAG-RRGEWAGYVDFSHGDFWEL------ 189 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 + L +P+ + + ++E++E+L Sbjct: 190 ----------------------------QGYVLKNPASA---HVGWVFEKEDYEKLLA-- 216 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP--FDPAIAPVRQSNLCL 440 R A ++ ++ RA TG+ Y+ N +P + +R S LC Sbjct: 217 ------RDPEYMAR--WNELLYMRARTGKGYMWKNWIANDLAPQAIKNSGIRIRSSQLCT 268 Query: 441 EIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDEL-EELAILAVRALDALLD----- 494 EIALP+ ++ C LS+ NL DE+ E AVR LD++ Sbjct: 269 EIALPSDDMH--------TFTCILSSLNLAR---WDEISAEDIKWAVRFLDSVCSEFLEK 317 Query: 495 YQDYP---IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYL 551 + P + A R R LG+G + F YL + + G+A+ L + + I+ Y Sbjct: 318 AKKLPYDTLHKAIRFTEKARALGLGTLGFHTYLQMNDTAFESGAAHILNNSIYSQIKVYA 377 Query: 552 LKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGL 611 AS ELA+E G W T G+ Sbjct: 378 EAASRELAEEHGEPEWCVGT--------------------------------------GM 399 Query: 612 RNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKASKDGILRQVVPDY----------- 659 RN+TL + P+ +S+ ++ + G+EP I+ S G + P Sbjct: 400 RNATLITIAPNMSSALLAGGVSQGVEPLVCNSFIQQSNAGDFVRSNPVLAKVLSDRLSDK 459 Query: 660 ------------------------EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISA 695 +H ++ +E+ ++L Q+ IDQ+ S Sbjct: 460 EIKDLMENIATYHNGSVQHLDILTDHEKMVFKTAYEI-DQHAIIRLASARQRHIDQAQSI 518 Query: 696 NTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCE 755 N + S + + D +K+LYY + G + + + ++ C+ Sbjct: 519 NLFFAADEKESVVASVHKAFMDDPR-----LKSLYYLRSERGVKASTGE----VECLACQ 569 Query: 756 S 756 Sbjct: 570 G 570 >UniRef50_B8G0R6 Ribonucleoside-diphosphate reductase n=5 Tax=Bacteria RepID=B8G0R6_DESHD Length = 1153 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 109/304 (35%), Gaps = 38/304 (12%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP-----RETRLQYVKRF 196 + A LE +YL Q GE+ ES + + VA+ + ++ + K F Sbjct: 15 NLTPNARVILEKRYLKQE--NGEVAESPEDMLYRVASIIAQVEETFGKTKKEVKELAKSF 72 Query: 197 YDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGI 256 Y+ ++ + +P + Q S+C ++ DS++ I + G G Sbjct: 73 YEMMAKLEFMPNSPTLMNAGRDLGQLSACFVLPVEDSMEEIFDAIKSAAIIHKSGGGTGF 132 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 + R+R S +R +G + F K F A ++ QGG R GA + H ++ Sbjct: 133 SFSRLRPKNSTVRSTGGVASGPVSFMKVFNAATEAVKQGGTRRGANMGILRVDHPDIREF 192 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 + K + + + + V I + + + L P Sbjct: 193 ITCKE----DNKEITNFNISVGITEEFMKAVQEKRHYNLIDPHTK--------------- 233 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 E D + A E+F L++ G I +D N +P P + + + Sbjct: 234 ------EADGQLY-----APEVFQLIVDHAWRNGEPGIIFLDRLNRDNP-TPQLGEIEAT 281 Query: 437 NLCL 440 N C+ Sbjct: 282 NPCV 285 Score = 224 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 70/333 (21%), Positives = 121/333 (36%), Gaps = 87/333 (26%) Query: 452 VNDENGEIAL-----CTLSAFNLGAIN---------NLDELEELAILAVRALDALLDYQD 497 GE L C L + NL + + + L ++ LA R LD +++ Sbjct: 646 YVHNCGEQPLLPNEACNLGSINLKLMVTEKNGKVVVDWERLGQITRLATRFLDNVIEANT 705 Query: 498 YPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNE 557 YP+P+ + G R +G+GV+ FA L Y+ A K IQ S Sbjct: 706 YPLPSIEEMVKGNRKIGLGVMGFADMLILLQTSYASEDAVEYAEKVMNFIQTEARLESQR 765 Query: 558 LAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLS 617 LA+E+G P + + Y G+ P LRN+TL+ Sbjct: 766 LAEERGTFPNYQGSIY-DGVRP-------------------------------LRNATLT 793 Query: 618 ALMPSETSSQISNATNGIEPPRGYVSIKASKDGI-LRQVVPDYEHL-------------- 662 + P+ T S I A++G+EP K DG L +V P ++ L Sbjct: 794 TIAPTGTISMICGASSGVEPLFAVAYTKTVMDGTPLIEVNPIFQSLAEDYGFNSPELMRK 853 Query: 663 -----------------HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 + + E+ + ++++ QK+ D ++S N+ Sbjct: 854 IAEKGTVLGFPEVPNWVQEVFVTAQEI-EPEWHIRIQAAFQKYTDNAVSKTINFA----- 907 Query: 706 SGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 + + + K A++ K T+Y +R+ Sbjct: 908 -NEATHEDIAKAYELAHELNCKGLTVYRDGSRE 939 >UniRef50_C9RBG7 Ribonucleoside-diphosphate reductase n=1 Tax=Ammonifex degensii KC4 RepID=C9RBG7_AMMDK Length = 955 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 114/305 (37%), Gaps = 39/305 (12%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS-----NYPRETRLQYVKR 195 + + LEG+YL ++ G + E+ + ++ VA + + ++ +R Sbjct: 18 LKLDANSRIILEGRYLKRDEA-GNVVETPEEMFWRVARAVAEAEARFGASAQEVEEWARR 76 Query: 196 FYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIG 255 F++ +++ +P + Q ++C ++ DS++SI T G G Sbjct: 77 FFELMASLDFLPNSPTLINAGRELGQLAACFVLPIEDSIESIFETLKYAALIHKSGGGTG 136 Query: 256 INAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVES 315 + R+R G P+R +G + F + F A + QGGVR GA H ++ Sbjct: 137 FDFSRLRPKGDPVRSTGGVASGPVSFMRIFNAATEEIKQGGVRRGANMGILRADHPDIME 196 Query: 316 LLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEF 375 + K G R+ + V + + L + + L Sbjct: 197 FVACKEEEGA----FRNFNISVAVTDAFFETLARSGEWELVF------------------ 234 Query: 376 ERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQ 435 +R+ A ELF ++Q + G + +D N +P PA+ + Sbjct: 235 ----------RGKVYRRLPARELFDWIVQHAHANGEPGLLFLDAINRANP-TPALGRIEA 283 Query: 436 SNLCL 440 +N C+ Sbjct: 284 TNPCV 288 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 70/345 (20%), Positives = 130/345 (37%), Gaps = 89/345 (25%) Query: 459 IALCTLSAFNLGAINN-----LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTL 513 C L + NL + + ++L E+ LAVR LD +++ ++P+PA R + Sbjct: 657 YESCNLGSINLLNMVDGAGFSWEKLREVVHLAVRFLDDVIEVNNFPVPAIAAATRRTRKV 716 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTY 573 G+GV+ +A L K G Y +A L + I+ AS +LA+E+G P + ++ Y Sbjct: 717 GLGVMGWADALFKLGIPYDSEAALGLGAEVMRFIREEARAASRQLAEERGTFPAWEDSVY 776 Query: 574 AKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATN 633 + P LRN+TL+ + P+ + S I+ + Sbjct: 777 ----------------YPHLP----------------LRNATLTTIAPTGSISAIAGVSP 804 Query: 634 GIEPPRGYVSIKASKDG----ILRQVVPDY------------------------------ 659 GIEP + DG ++ +V +Y Sbjct: 805 GIEPVFALAYTRMVLDGKKLLVVDKVFQEYVEQNFPPSRREEIMAGVSRTGNLGLCAEEL 864 Query: 660 ---EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLK 716 E + ++ E+ + +L+ Q++ D ++S N P +++ + Sbjct: 865 DLPEDMRRLFKTALEI-APEWHLRHQATFQQYTDNAVSKTINLPSDSSP------EEVGQ 917 Query: 717 DLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 A++ VK L T G+ Q L+P+ C++ Sbjct: 918 IFWKAFELKVKGLTVYRT--GSRREQPLLLPT------TCRPCRL 954 >UniRef50_O31875 Bsu nrdEB intein n=33 Tax=root RepID=NRDEB_BACSU Length = 1084 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 72/342 (21%), Positives = 137/342 (40%), Gaps = 10/342 (2%) Query: 101 ALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTF-SYAAVKQLEGKYLVQN 159 L + + +++ Y+ L YT E+ K + I + F S+ + + Y ++ Sbjct: 49 DLKEKLDYLIKNDYYEEEFLSKYTFEQIKSIYK-IAYSYKFRFPSFMSAFKFYNDYALKT 107 Query: 160 RVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPT 219 +I E + +VA + + + + TP Sbjct: 108 NDKTKILERYEDRVSIVALYCADGDYEKAVEE-----VHTMMKQEYQPATPTFLNAGRKR 162 Query: 220 -RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 + SC L+E GDSL+ I+ ++ G+ +N ++RA G I+ E G Sbjct: 163 RGEMVSCFLLEVGDSLNDISRAIDISMQLSKLGGGVALNLNKLRAKGEAIKDVENATKGV 222 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 + K A + Q G R G+ ++ ++H ++ L K E RV+ + GV Sbjct: 223 VGVMKLLDNAFRYADQMGQRQGSGAVYLSVFHPDITDFLDTKKISADEDVRVKTLSIGVV 282 Query: 339 INKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVEL 398 + + +D +F P V Y + D+ + +Y + ++ +RK + A +L Sbjct: 283 VPDKFIELAREDKDYYMFYPHSVYKEYGQYL-DELDINEMYDELVENPRVRKAKGNARKL 341 Query: 399 FSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 + R+ +G YI D+ N P + I+ V+ SNLC+ Sbjct: 342 LEQLAILRSESGYPYIMFADNVNKVHP-NEHISKVKFSNLCV 382 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 81/390 (20%), Positives = 155/390 (39%), Gaps = 21/390 (5%) Query: 366 DAFFADQEEFE-RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS 424 + F + E E +Y ++++ + K F+ + G + + + HS Sbjct: 696 ELFMSIVEMKEYDVYKFNLLTETLQPKSRKPKHDFTAEIISIEEDGVEDVYDTTQEDYHS 755 Query: 425 PFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAIL 484 I S + + D DE G C L + N+ + + + + Sbjct: 756 LIFNGIVTGNCSEVLQSSQVSVYTDYDKEDEIGLDISCNLGSMNIVNVMSNQSIASTVRI 815 Query: 485 AVRALDALLDYQDY-PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKT 543 A+ +L + + PA R R++G+G +N +LA++ Y A + + Sbjct: 816 AIDSLTTVTRKTNIVNAPAVARANTLMRSIGLGQMNLHGFLAQNNIAYESEEAKDFANTY 875 Query: 544 FEAIQYYLLKASNELAKEQG-ACPWFNETTYAKGIL----------PIDTYKKDLDTIAN 592 F + +Y L+ S E+A+E G F+ +TY G P K L + Sbjct: 876 FMMVNFYSLQRSMEIARETGETYYKFDGSTYKSGEYFEKYVTNDYSPQYEKVKKLFGDQH 935 Query: 593 EPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGIL 652 P DW L+E + +GL +S A+ P+ + S + ++T G+ P + + + Sbjct: 936 IPNIQDWMKLKEDVMKYGLYHSYRQAIAPTGSISYVQSSTAGVMPIMERIEERTYGNSKT 995 Query: 653 RQVVPDYEHLHDA-YELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPM 711 +P + Y+ ++M + L+ +Q+ +DQ IS F + Sbjct: 996 YYPMPGLSAQNWFFYKEAYDMDMFK-VVDLIATIQQHVDQGISFTL------FLKDTMTT 1048 Query: 712 QQLLKDLLTAYKFGVKTLYYQNTRDGAEDA 741 + L + L A+ G+KTLYY T+D ++ Sbjct: 1049 RDLNRIDLYAHHRGIKTLYYARTKDTTQEG 1078 >UniRef50_Q3JIM4 Ribonucleoside reductase, intein-containing n=47 Tax=Burkholderia RepID=Q3JIM4_BURP1 Length = 639 Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 110/632 (17%), Positives = 199/632 (31%), Gaps = 83/632 (13%) Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPT 209 +Y + S VA L P TR +RFY + Sbjct: 59 VFADRYALPGE------HSRAQACARVARALALAEPMATRSGAARRFYRNLLNGAFG-AG 111 Query: 210 PIMSGVRT-PTRQFSSCVLIEC---------GDSLDSINATSSAIVKYVSQRAGIGINAG 259 IM+ P + +SC + +LD ++ A IG + Sbjct: 112 RIMARAGAAPDQTMASCFVHPIRAPAALTRFHPNLD---EALDEARLALAMGADIGYDFS 168 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 I G+ G F + R A H ++ + Sbjct: 169 AIPPAGARPDADHPDSPGVCAALDRFDRIGTQAGERDGRRRAQLAVLRCDHPDLLAFAAA 228 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLF---SPSDVPGLYDAFFADQEEFE 376 K+ R ++ V + + TL P D PG Sbjct: 229 KHRHAGRHARWTTLELAVAATDAFMQAVEQDLPWTLRHTAPPRDAPG------------- 275 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 D + V A ++ ++ + VD + P + + Sbjct: 276 --GALPGADGAWTYASVPARHVWREIVSAARDGAGPGLVFVDAIDAADPLR-GRERIDAT 332 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI--NNLDELEELAILAVRALDALLD 494 + C A P P +++ + F G + + + VR LD LD Sbjct: 333 SPCG--AQPLPPYGSAMLGAIDLSRFVRNPFGAGGEPRFDFAAFDTAVRIEVRLLDNALD 390 Query: 495 YQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKA 554 +P+ A R + +R +G+GV A LA RY +A + ++++ A Sbjct: 391 VTRWPLAAHARESYQKRRIGVGVTGLADMLAMMRLRYDSPAAREMARYIASDLRHHAYAA 450 Query: 555 SNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNS 614 S ELA E+GA P + + L P A+ +I+ GLR+S Sbjct: 451 SAELAAERGAYPLCDR----------HAHLDALRAGPPLPH-----AVCHAIERDGLRHS 495 Query: 615 TLSALMPSETSSQISN--ATNGIEPPRGYVSIKASKDG---------------ILRQVVP 657 L++ P S + GIEP R ++ + + G + R + Sbjct: 496 HLTSFAPVIGVSLAFGDHCSPGIEPARAWIEHRPVRAGAAGAPGMRAENHAHRLFRSLRG 555 Query: 658 DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKD 717 + L D + ++ + L + +Q ++D I D + + ++++ Sbjct: 556 ERAALPDYFATDADVAPGER-LAMRVALQPYVDAGI------DNTLTLANHYSLEEVNAL 608 Query: 718 LLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSI 749 L A++ +K++ + D A DAQ + Sbjct: 609 LFAAWRAKLKSVAIRRA-DLARDAQPSDDDGV 639 >UniRef50_Q897Z5 Ribonucleoside-diphosphate reductase (Vitamin B12-dependent) n=3 Tax=Clostridium RepID=Q897Z5_CLOTE Length = 1047 Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats. Identities = 138/819 (16%), Positives = 260/819 (31%), Gaps = 186/819 (22%) Query: 89 LRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTF----S 144 L K +F + + + ++ + L++ + ++ + + +D+ F S Sbjct: 13 LNKIIRRKFTKELEKNKNLTVYDLFNW--KLVDVFLKDH--KTGKVLVDMKDLEFPEHYS 68 Query: 145 YAAVKQLEGKYLVQNRVTGEI-YESAQFL--YILV---AACLFSNYPRETRLQYVKRFYD 198 + + KY + V + YE++ + + +V A+ L +T+ + FYD Sbjct: 69 QNSCDIIASKYFRKAGVPNKYGYENSMKMVAHRMVNFWASALHEQGLLKTKDEKQI-FYD 127 Query: 199 ----AVSTFKISLPTPIMSGVRT------------------------------PTRQFSS 224 A+ + + +P Q S+ Sbjct: 128 EMVYALLSQMYAPNSPQWFNTGLCMEYGIKGSPNGNYYYDENLKQVVESVDSYSRTQASA 187 Query: 225 CVLIECGDSL---DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF 281 C ++ D L SI+ K +G G N IRA G + GG +G + F Sbjct: 188 CFILSIEDKLLGSHSISDQYVNETKLFKGGSGTGTNFSTIRAKGEKLSGG-GVSSGLMSF 246 Query: 282 YKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQIN 340 K + GG R A + + H E+ + K + + M Y + I+ Sbjct: 247 LKGLDRNAGAIKSGGTTRRAAKMVCLDIDHPEILDFITWKAREEDKVRALGKMGYDMDID 306 Query: 341 KLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT----KYEKDDSIRKQRVKAV 396 Y + + + ++ D F + + + + DS Q+VK Sbjct: 307 GEAYETV------SGQNSNNSIRFSDFFMEKVKNLDSMPDDTIELEGRVDSSVNQKVKVK 360 Query: 397 ELFSLMMQERASTGRIYIQNVDHCNTHS--------PFDPAIAPVRQSNLCLEIALPTKP 448 +L+ + Q D N + + +N C E A Sbjct: 361 DLWDSFAKSTWMCADPAPQFSDTFNAWHTCPAGEDGNVNAKHNKINSTNPCGEYAF---- 416 Query: 449 LNDVNDENGEIALCTLSAFNLGAINN-------LDELEELAILAVRALDALLDYQDYPIP 501 + + C L++ N+ + L+ + L AL+A + + +P Sbjct: 417 --------LDNSSCNLASINIYKFYDGKEKNIDLESYLHVVGLVQLALEASIYWGQFPTK 468 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 + R G+G+ N A L G Y+ A N++ + Y S+ +AKE Sbjct: 469 DIAQKTYMFRATGLGITNLASLLMVLGYPYNSTEARNISSALVGLLTGYSYYISSLMAKE 528 Query: 562 QGACPWFNETT---------YAKGILPIDTYKKDLDTIA----------------NEPLH 596 G F+ +AK I+ +DL+ + L Sbjct: 529 IGTFEKFSINKPHMLKVIRNHAKVAGSINGLYEDLNYNPVKVDHNLLENIGFSDLSNLLK 588 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGY-VSIKASKDGILRQ 654 W S + HG RN+ +S + P+ T S + IEP + V K S G++ Sbjct: 589 KSWLKALNSGEEHGYRNAQVSVIAPTGTISFAMDCGATSIEPFFSHVVYKKLSGGGMMTV 648 Query: 655 VVPDYE----------------------------------------------HLHDAYEL 668 P E HL + Sbjct: 649 TNPVIELSLKNLGYSKEQIKDILQYVLEKEVVQTKEGFKYEKVLDGKIEGAPHLKKEHYA 708 Query: 669 LWEMPGN----------DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDL 718 +++ G++++V + I +IS N ++ K + Sbjct: 709 IFDTANKCGSGKRYIEPMGHVKMVAALTPLISGAISKTVNLP------NNATIEDFKKVI 762 Query: 719 LTAYKFGVKTL--YYQNTRDGAEDAQDDLVPSIQDDGCE 755 L +++ GVK + Y RDG + +Q V + E Sbjct: 763 LNSWELGVKGIALY----RDGCKASQPLNVSLSSEKDFE 797 >UniRef50_B2KX75 Ribonucleoside-diphosphate reductase n=2 Tax=Spodoptera frugiperda MNPV RepID=B2KX75_NPVSF Length = 850 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 111/675 (16%), Positives = 232/675 (34%), Gaps = 115/675 (17%) Query: 86 IFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSY 145 + + + + F+ + + Y ++ ++++ + HDRD T+ Sbjct: 219 VTEMHEDIHESFQVVMKNLYHKNEIGQRLYCLAMVYG------EELNKVLRHDRDYTYD- 271 Query: 146 AAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKI 205 +L + E Q +++ VA ++ + +Q V Y +S Sbjct: 272 ---LRLY-------ENKNNLLERVQHMFMRVALTMYGD-----DIQKVIESYHMMSLRMY 316 Query: 206 SLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI---NATSSAIVKYVSQRAGIGINAGRIR 262 + + T + Q ++ + + D+I ++ + + + Sbjct: 317 AHSDLAFACAGTNSTQLANDYKLYVDNCSDNIFLSYKIIQECATIMNCGGAVDLYMQNV- 375 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 + F V+ T+ +WH EV++ + N Sbjct: 376 ---------------SVKMLPVFNNMVRHILHKNKIVKLPTIHIELWHHEVKNFIETIRN 420 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 +V + + V I + R+ TL P L + ++FE+ Y K+ Sbjct: 421 NSD---KVNFLQFTVDIPDIFMNRVKNNGYWTLLDPESCTSLSSKY---GDKFEQAYVKF 474 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEI 442 EK + I + VKA +L L++ G + + D N + + N+ Sbjct: 475 EK-EHINAKIVKAKDLLKLIIDTMRINGNLSVMFKDTFNNNFSIEDEQVK---YNIVFSA 530 Query: 443 ALPTKPLNDVNDENGEIALCTLSAFNLG-AINNLDELEELAILAVRALDALLDYQDYPIP 501 ++ NL + + L + VR LDA+++ YP+ Sbjct: 531 SVAVDKC-----------------VNLETKQFDYNLLRRITKNVVRDLDAMININMYPLD 573 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 + + + +G+ FA L G + A L E I Y ++ASNELA+ Sbjct: 574 KFEN---KKHNIAVGMQGFAETLLLLGYTFDMVEAKALNKLIAETIYYGAIEASNELAE- 629 Query: 562 QGACPWFNETTYAKGILPIDTYKKDLDTIA-NEPLHYDWEALRESIKTHGLRNSTLSA-- 618 A NE+ K ++ + NE L +DW++L E ++ +G+++ T + Sbjct: 630 --ASKELNESGKKKSHRNEKITQQIYNVYTDNETLMWDWQSLHEKVERYGVKHVTFVSNT 687 Query: 619 ------LMPSETSSQISN--------------------ATNGIEPPRGYVSIKASKDGIL 652 ++ ++T+S N A + P SI A+K+G + Sbjct: 688 YKTAFEILGTKTTSGPFNSFLYQIEKINYIEEVLVRALAHENLNTPTVINSILATKNGSV 747 Query: 653 RQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQ 712 + +H+ ++L E L + +IDQ+ + Sbjct: 748 QNNDLIPDHIKKVFKLNTETDCKQ--LDYMIENSPYIDQTQELILH---------DTNYD 796 Query: 713 QLLKDLLTAYKFGVK 727 + ++L A++ +K Sbjct: 797 NIYCNILKAWQNKLK 811 >UniRef50_A4WLF4 Ribonucleoside-diphosphate reductase n=2 Tax=Thermoproteaceae RepID=A4WLF4_PYRAR Length = 1240 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 81/464 (17%), Positives = 162/464 (34%), Gaps = 51/464 (10%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + V K DG E +++K+ + A + + V L + + + ++ + + Sbjct: 1 MSVNKLDGRVEPFSMEKLKISIAKAGADVGVDTNVDVSLEVKKEV---VWSWELADMVQL 57 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQ--FEPPALY-----DHVVKMVEMGKYDN 117 + D P+ +A + + K+A+G+ + Y +V+ G Sbjct: 58 ELLKR-AIDRPELALVAQSHLLGRVYKEAFGKDFLKTKVGYGERAAARFKSLVDAGLLKR 116 Query: 118 HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGK-YLVQNRVTGEIYESAQFLYILV 176 LE ++ E + + D + SY A++ Y ++++ + E+ V Sbjct: 117 EALEFLSKFEPR-------PEFDRSLSYNALRLFTNGNYALRDQ-NFRLAETPSMAAWRV 168 Query: 177 AACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDS 236 A + L+ + +YD ++ KI +P T F+SC +E D L S Sbjct: 169 ATAVA------RELERARLYYDYITKLKIVPASPFWFNAWTKKEMFASCFTLEVEDCLSS 222 Query: 237 I--------NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTA 288 I + G+G + +R G +RG +G I F + F T Sbjct: 223 ITHPGRYCIYDALAYSGIIQQLGGGVGYDFSLLRPEGDVVRGSVGVASGPISFMRLFDTN 282 Query: 289 VKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLL 348 V QGG R GA +WH ++ + K + + +++ + V + + L Sbjct: 283 VDVIKQGGKRRGAQMGTLHVWHPDIRKFIKAKTGELKDAH-LQNFNISVFADDTFMEKAL 341 Query: 349 ---KGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQE 405 + L +P E+ ++++ + A ELF + Sbjct: 342 GIDQNPKYKLINPRAFVEKTGTKP---VEYVDEREVAIPEEAV-WGEINAKELFKEIAHG 397 Query: 406 RASTGRIYIQNVDHCNTHSPFDPAIAPV---------RQSNLCL 440 +G + + N +P V R N C+ Sbjct: 398 AWDSGDPGMIFKSNLNASNPLLGVEIEVAGYKFRYVWRSVNPCV 441 Score = 224 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 123/360 (34%), Gaps = 81/360 (22%) Query: 450 NDVNDENGEIALCTLSAFNLGAIN----------------NLDELEELAILAVRALDALL 493 N +C L+ NL + D L + A + R LD + Sbjct: 831 NCAETVQNPFEVCNLTHINLVKFVKDNCGGGSFEEKLGCIDWDGLAQAARVGTRFLDDAI 890 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 D I R G+G++ FA L K G Y+ A L ++ I L Sbjct: 891 DRSKTGIEVIDEMNAATRKNGLGIMGFAELLIKLGVPYASWEAVELINRIMGWIYVNALD 950 Query: 554 ASNELAKEQGACPWFNETTYAKGILP--------IDTYKKDLDTIANEPLHY-------- 597 S ELA+E+G +F+++ YA+G +P +++ E Sbjct: 951 ESAELAREKGPFKFFHKSIYARGEIPVLKFQDHVWSRWERIKRVYPRELQEAGDKLRDIT 1010 Query: 598 ----DW-----EALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 W + L E ++ G+RNS + ++ P+ +S ++ T+G+EP ++ Sbjct: 1011 MRTRQWLGPYLDKLSEKVRG-GVRNSVVLSIAPTGRTSILAGTTSGVEPVFALAFLRNVT 1069 Query: 649 DGILRQVV------------------------------PDYEHLHDAYELLWEMPGNDGY 678 G L + P E + E+ G + Sbjct: 1070 VGTLVEYYEPGIELLKSRGLWTPQVRKVVEETGMLRDAPVPEDVKHLLATAMEI-GWLWH 1128 Query: 679 LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 + + Q+++DQ IS N P + + A+ GVK T+Y ++ Sbjct: 1129 VLMQASAQQWVDQGISKTINMP------ANAPEEDVYWAFAFAWAVGVKGITVYRDKSKS 1182 >UniRef50_C6BZ68 Ribonucleoside-diphosphate reductase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZ68_DESAD Length = 894 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 118/726 (16%), Positives = 233/726 (32%), Gaps = 144/726 (19%) Query: 153 GKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIM 212 KY +++R S + + N E ++ + + + + I+ Sbjct: 29 KKYQIRDRKGRLQEHSFNDVKNRLCREFLKNSQFEKNEN--EQVCELLQSGRFIPAGSIL 86 Query: 213 SGVRTPTR--QFSSCVLIECG-DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIR 269 SG+ S+C L + DSL+ I + + S R G GI+ +R G P+ Sbjct: 87 SGLGNEHAKCSLSNCYLAKIESDSLEGIFEAQKKLARTYSYRGGSGIDITILRPSGDPVN 146 Query: 270 GGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNR------ 323 +G + F F + Q G R GA + + H E + K+ Sbjct: 147 NAAVTSSGAVSFMPLFSELTNTIGQNG-RRGALMISIDIRHPETRRFIWCKSKPEEIFGV 205 Query: 324 GVEGNRVRHM---DYGVQINKLMYTRLLKGEDITLFSPSD---------------VPGLY 365 +V+ + + +++ + + +D T P +P +Y Sbjct: 206 DSLTGKVQDVFGANISLKVTDEFMQAVEEDKDWTFIFPDRFKISGKIINESTLQLLPEVY 265 Query: 366 DAF---FADQEEFERLYTKYEKDDSIRKQRV-------------KAVELFSLMMQERAST 409 +A D+ E E Y D + +V L ++ ++R T Sbjct: 266 EALSPQVGDRIEAEITYKVIGIDSKKHQIKVQPDLPINEDSTALSEENLTFILSRKRNET 325 Query: 410 GRIY------------------------IQNVDHCNTHSPFDPAIAPVRQSN----LCLE 441 I+ ++ D + +S L + Sbjct: 326 SDIFDPVKSVYNTLWDGDYSRWQELGLPLRKYDTVKARDLLEEISESAWKSGDPGILYQD 385 Query: 442 IALPTKPLNDVN---------DENGEIAL-----CTLSAFNL----------GAINNLDE 477 P ++ + GE AL C L A L A + D Sbjct: 386 TTQRNTPGTYIDPLRLKPMSTNPCGEQALGYWSNCLLGAMVLYRYVVNPFTKEARFDSDL 445 Query: 478 LEELAILAVRALDALLDY--QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGS 535 + + +D + D +P+ + + +GI LA G RY Sbjct: 446 FHDDLTRTMAFMDTMSDLNQNKHPLQKHRDADKYGKRIGIEFTGLGDMLAMLGMRYGSEE 505 Query: 536 ANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPL 595 + + + S +A+ G +T A+ Y L Sbjct: 506 SIEFIKEIMRDKAITEISVSANIAERFGEVEAL-KTKDARQRFLDCPYISKLGLP----- 559 Query: 596 HYDWEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKASK--DGIL 652 L++ I GLR++ + + PS + S +S N T+GIEP + + ++ G + Sbjct: 560 ----NKLQKKILKTGLRHTAFNTVGPSGSISIMSDNCTSGIEPVFMFSYARETRLEAGKV 615 Query: 653 RQ----------VVPDYEHLHDAYELL----------WEMPGNDGYLQLVGIMQKFIDQS 692 + + + EHL Y L + +++ +Q++ D S Sbjct: 616 FEFIHMPPLKWMLETNQEHLFGKYTALQLKEKLNYVQADELDYMDRIRMQAAIQQYTDSS 675 Query: 693 ISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGA---EDAQDDLVP 747 IS+ N + P + + + L ++K G+K T++ + G ++ + P Sbjct: 676 ISSTINLA------EETPKETIFEIYLESWKHGLKGVTVFRNGCKKGVLSKKEDSKEADP 729 Query: 748 SIQDDG 753 +++ Sbjct: 730 TMKGQN 735 >UniRef50_C9DFZ9 Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Deftia phage phiW-14 RepID=C9DFZ9_9CAUD Length = 711 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 116/670 (17%), Positives = 212/670 (31%), Gaps = 140/670 (20%) Query: 129 KQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRET 188 + + ID R + + + YL+ + E+ Q A SN Sbjct: 4 EYLGIIIDETR----TDTSKGRTASNYLITQHYS-RPGETIQQTIARAAVAWSSN----- 53 Query: 189 RLQYVKRFYDAVSTFKISLPTPIMSGVRTP----TRQFSSCVLIECGDSLDSINATSSAI 244 L + +R YD S +P S P SC L + DS+ + + + Sbjct: 54 -LAHAQRLYDYASKDDFIWASPAFSNATLPGEKIRAMPISCFLPDVPDSVPGLLYQKAEL 112 Query: 245 VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL 304 + G + IR G IPF +A+ + QG +R GA + Sbjct: 113 SLLS-------VLGGGVGQNFGGIRSVSDKAPGPIPFIAENDSAILAWKQGKIRRGALSA 165 Query: 305 FYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKG-EDITLFSPSDVPG 363 + H + + ++ G + ++ +G + ++ G E + L P Sbjct: 166 NLGVTHPDTMEFMRIRVPTGDIERKSLNIHHGFNVTDEYMQAVVDGIETLPLIDP----- 220 Query: 364 LYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTH 423 + + E F M+ R+ TG ++ +D + Sbjct: 221 ----------------------TGKQVGSMNPREHFREMVTVRSRTGEPFMYFIDRAQEY 258 Query: 424 SPFDPAIAPV--RQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDE-LEE 480 + + + +N+C EI L +C L + N + +E Sbjct: 259 LSLPQKLIGMACKATNICTEITL--------AATKDRTPVCCLCSINAERYEDFKPYYQE 310 Query: 481 LAILAVRALDALL--------------------DYQDYPIPAAKRGAMGRRTLGIGVINF 520 + + LD ++ D + K+ A R++G+GV+ Sbjct: 311 MVSDLIEMLDNIIEFFVQNVEKVAEGYADQLDRDLIRLLVQKVKKSAECERSVGLGVMGL 370 Query: 521 AYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPI 580 AY L + ++ + + F ++ + AS L E+G P I Sbjct: 371 AYMLQRADMVFAGEDSREYELEFFRQLKDFSHAASCRLGIERGVPPD------------I 418 Query: 581 DTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRG 640 Y + + EP Y W RN L A+ P+ SS I N + IE Sbjct: 419 QAYLEKCKELGIEPDPY-WVN---------RRNLHLLAIAPNANSSVILNTSASIEFMYS 468 Query: 641 YVSIKASKDGILRQVVPDYEH----------------------------LHDAYELLWEM 672 V + + G E L + + ++ + Sbjct: 469 NVYSREMRTGTFEVRNRYLEKLLESQGRNTEEVWNQIKADSGSVKGLDFLTEHQKRVYAV 528 Query: 673 PGNDGYLQL---VGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL 729 P + + G Q +I Q+ S N + P + ++ + A+K GVK+L Sbjct: 529 PEEMNMMDVVVRAGERQVYICQAQSLNLFFPPGS------DINFVMAVHILAWKVGVKSL 582 Query: 730 YYQNTRDGAE 739 YY T + Sbjct: 583 YYYKTESEVK 592 >UniRef50_UPI00004BA6C5 truncated ribonucleoside-diphosphate reductase 2, alpha subunit n=1 Tax=Staphylococcus epidermidis RP62A RepID=UPI00004BA6C5 Length = 969 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 80/368 (21%), Positives = 157/368 (42%), Gaps = 18/368 (4%) Query: 78 QYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDH 137 A +L + H++ K QF + +VE Y + + +DY+EE ++ +D+ Sbjct: 25 DKEAIKLYLEHIKSKT-KQFS--NQIARLRYLVEEDYYID-VFKDYSEETLLEL---LDY 77 Query: 138 DRDMTF---SYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVK 194 F S+ A + Y ++ R + E + ++V+ L + K Sbjct: 78 AYSFGFEFQSFMAASKFYDTYALKTRDKSQWLEDFEQHNVIVSLYLAGG-----DVDLAK 132 Query: 195 RFYDAVSTFKISLPTPIMSGVRTP-TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAG 253 R+ A + + TP + +SC L D+L+SIN S + + G Sbjct: 133 RYIKAHTLQTVQTATPTYLNAGRKQRGELASCYLFTMDDTLNSINFIRSQVSQASKIAGG 192 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 + +N R+R G+ ++G + G +P K + V Q G R GA + ++H +V Sbjct: 193 VAVNLTRLRGRGATLKGVKNVGKGIVPVAKLIEGEVSYADQLGQRAGAGAAYLNIFHSDV 252 Query: 314 ESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF-FADQ 372 LL K E R+ + G+ + L + + +D+ +F P + + D Sbjct: 253 IELLNTKKVNADEDTRLATLSIGLIVPSLFFDLAKEDKDLYMFEPYSIQEEFGKDVILDD 312 Query: 373 EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP 432 Y K+ +++++ K ++ A E+ +L+ Q + +G YI D+ N + + + Sbjct: 313 ININDWYDKFVENENVIKHKINAREMLNLIAQIQLQSGYPYIMYKDNANKNHALN-ELGE 371 Query: 433 VRQSNLCL 440 ++ SNLC+ Sbjct: 372 IKMSNLCV 379 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 24/207 (11%) Query: 439 CLEIALPTKPLNDVN----DENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLD 494 C EI + + DE G+ +C L++ N+ E+EE +RAL + + Sbjct: 762 CTEIFQYMHVSDIKDYYEPDELGQDIICNLASLNMVKSIEEKEIEESIRTGMRALTFVAN 821 Query: 495 YQDYP-IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 +P + R +G+GV++F AK+ RY + +L + + YY L Sbjct: 822 NSRIEHLPTVHKANKNNRAVGLGVMSFHSMCAKNKIRYGSEESLDLLNVYCMMMDYYSLD 881 Query: 554 ASNELAKEQG-ACPWFNETTYA------------------KGILPIDTYKKDLDTIANEP 594 S ++A E+ F++T Y K + PI K++ P Sbjct: 882 ESMKIAVERNDKFYGFDQTDYKAKDGKEFGEYFYKNNRVTKNVEPITPKVKEIFKGIYIP 941 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMP 621 DW+ L + +GL NS ++ P Sbjct: 942 TKEDWQRLAREVDKNGLYNSYRLSIAP 968 >UniRef50_D1GPW6 Ribonucleoside-diphosphate reductase n=1 Tax=Staphylococcus aureus subsp. aureus TW20 RepID=D1GPW6_STAA0 Length = 1091 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 80/368 (21%), Positives = 156/368 (42%), Gaps = 18/368 (4%) Query: 78 QYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDH 137 A L + H++ K QF + +VE Y + + +DY+EE ++ +D+ Sbjct: 25 DKEAIELYLEHIKSKT-KQFS--NQIARLRYLVEEDYYID-VFKDYSEETLLEL---LDY 77 Query: 138 DRDMTF---SYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVK 194 F S+ A + Y ++ R + E + ++V+ L + K Sbjct: 78 AYSFGFEFQSFMAASKFYDTYALKTRDKSQWLEDFEQHNVIVSLYLAGG-----DVDLAK 132 Query: 195 RFYDAVSTFKISLPTPIMSGVRTPT-RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAG 253 R+ A + + TP + +SC L D+L+SIN S + + G Sbjct: 133 RYIKAHTLQTVQTATPTYLNAGRKHRGELASCYLFTMDDTLNSINFIRSQVSQASKIAGG 192 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 + +N R+R G+ ++G + G +P K + V Q G R GA + ++H +V Sbjct: 193 VAVNLTRLRGRGATLKGVKNVGKGIVPVAKLIEGEVSYADQLGQRAGAGAAYLNIFHSDV 252 Query: 314 ESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF-FADQ 372 LL K E R+ + G+ + L + + +D+ +F P + + D Sbjct: 253 IELLNTKKVNADEDTRLATLSIGLIVPSLFFDLAKEDKDLYMFEPYSIQEEFGKDVILDD 312 Query: 373 EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP 432 Y K+ +++++ K ++ A E+ +L+ Q + +G YI D+ N + + + Sbjct: 313 ININDWYDKFVENENVIKHKINAREMLNLIAQIQLQSGYPYIMYKDNANKNHALN-ELGE 371 Query: 433 VRQSNLCL 440 ++ SNLC+ Sbjct: 372 IKMSNLCV 379 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 76/349 (21%), Positives = 139/349 (39%), Gaps = 47/349 (13%) Query: 439 CLEIALPT--KPLNDVN--DENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLD 494 C EI + D N DE G+ +C L++ N+ E+EE +RAL + + Sbjct: 762 CTEIFQYMHVSDIKDYNEQDELGQDIICNLASLNMVKSIEEKEIEESIRTGMRALTFVAN 821 Query: 495 YQDYP-IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 +P + R +G+GV++F AK+ RY + +L + + YY L Sbjct: 822 NSRIEHLPTVHKANKNNRAVGLGVMSFHSMCAKNKIRYGSEESLDLLNVYCMMMDYYSLD 881 Query: 554 ASNELAKEQG-ACPWFNETTYA------------------KGILPIDTYKKDLDTIANEP 594 S ++A E+ F++T Y K + PI K++ P Sbjct: 882 ESMKIAVERNDKFYGFDQTDYKAKDDKEFGEYFYKNNRVTKNVEPITPKIKEIFKGIYIP 941 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMP--SETSSQISNATNGIEPPRGYVSIKASKDGIL 652 DW+ L + +GL NS ++ P +++ S I+N ++ + P V + + Sbjct: 942 TKEDWQRLAREVDKNGLYNSYRLSIAPYRTQSISYITNCSSALTPVVDVVEKRKYGNSET 1001 Query: 653 RQVVP--DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVP 710 +P E + +++P + + + + QK+IDQ +S F + ++ Sbjct: 1002 YYPMPYLSPETMWFYSPTAFDIP-QEHIINVAAVAQKWIDQGVSTIL------FVNSEIE 1054 Query: 711 MQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGAC 759 +L + A+ G+K+LYY + I C S A Sbjct: 1055 TNKLARLYAYAHDRGLKSLYYTRNK------------LISIAECTSCAV 1091 >UniRef50_B2UNR7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Verrucomicrobiales RepID=B2UNR7_AKKM8 Length = 1180 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 102/561 (18%), Positives = 179/561 (31%), Gaps = 114/561 (20%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYE-SAQFLYILVA---------ACLFSNYPRETRLQY 192 + AVK KYL + YE S + +Y ++ F+ Sbjct: 77 WDDNAVKITADKYLFGSEPGSLEYEDSFRNIYDRISNTYTVWGWEEGYFATLEDAEIFNE 136 Query: 193 VKRFYDAVSTFKISLPTPIMSGVRT----------------------------------- 217 + + + +P+ + Sbjct: 137 EIK--AMLVQQIWAPNSPVWFNIGHWEQWRWGRPDLRENYTGHGNKAYHTKGTKNNLKTF 194 Query: 218 ------PTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGG 271 Q S+C L E GDS++ I + + + +G+GIN +R+ PI G Sbjct: 195 MVQSTYEYPQCSACFLTEVGDSMEDILDHLTTEGRIFASGSGVGINLSTLRSSKEPISG- 253 Query: 272 EAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGV-EGNR 329 + +G I F + + + GG R A + H ++ + KN + Sbjct: 254 KGRSSGPISFDRGWDRMAGAIKSGGKTRRAARMVLMFSDHPDIFEFINTKNRQEDIAKVI 313 Query: 330 VRHMDYGVQINKLM--------------------------------YTRLLKGEDITLFS 357 +R + V++ ++ LL GE ++ + Sbjct: 314 LREHNVHVELKQIAETKLVAGTPAEKAAARVILSLPLATRNSFDPHMDALLYGETLSHQN 373 Query: 358 PSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417 + L F+ YT++ + + +Q +A EL M Q G + N Sbjct: 374 ANHSVSLKGDFWQALANNGNTYTRWVTNPAHIEQTFRAQELLEAMAQSIWDNGEPGVHNN 433 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----- 472 D N +P +I + SN C E +N+ + C LS+FN Sbjct: 434 DVINLWNPVK-SIGTITTSNPCSEYV-------FLNNTS-----CNLSSFNAYRFLIKGE 480 Query: 473 -----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKH 527 + D L A LA+ D ++ +PI G RT GIG N L Sbjct: 481 DGKPVFDADALTHAARLAMVCADLNVERGGFPIEEIAEGTYKYRTTGIGFANVGGSLMAL 540 Query: 528 GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDL 587 G Y + + A+ AS E+ E G+ + + K +L + Sbjct: 541 GVPYDSDEGRWIASQLCSALTAACWTASAEMGAELGSYVEYPASK--KDLLAVLRLHNAA 598 Query: 588 DTIAN-EPLHYDWEALRESIK 607 +A+ P D + L + I+ Sbjct: 599 QKLASALPSQKDSKTLDDLIE 619 >UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=Thermococcaceae RepID=Q5JJ43_PYRKO Length = 1746 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 77/337 (22%), Positives = 128/337 (37%), Gaps = 61/337 (18%) Query: 450 NDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVRALDALLDYQDYP 499 N + E C L++ NL + DE + + LD +D +P Sbjct: 1296 NCGEEPLYEYESCNLASINLAKFVKYDDEGKPYFDWDEYAYVIQKVAKYLDNAIDVNKFP 1355 Query: 500 IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELA 559 +P R R +G+G++ A L K G Y+ + K E + +Y K S E A Sbjct: 1356 LPEIDRNTKLTRRIGVGMMGLADALFKLGIPYNSKEGFDFMRKATEYLTFYAYKRSVEAA 1415 Query: 560 KEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSAL 619 KE+G P + +T Y G LP++ + E + W+ L E IK +G+RN ++ Sbjct: 1416 KERGPFPLYEKTRYKDGELPVEGFYH------REIWNLPWDELVEEIKKYGVRNGMVTTC 1469 Query: 620 MPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY-------------------- 659 P+ + S I++ ++GIEP V K+ G V P + Sbjct: 1470 PPTGSVSMIADTSSGIEPIFALVYKKSVTVGEFYYVDPVFEAELKKRGLWSDEILKKISD 1529 Query: 660 ------------EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSG 707 E + + ++ D ++ +Q ++ S S N Sbjct: 1530 NYGSVQGLEEIPEDMQRVFVTAMDIHWLD-HILAQANIQLWLTDSASKTINMP------N 1582 Query: 708 KVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQ 742 ++ + L AYK G K T+Y RDG+ Q Sbjct: 1583 DATVEDVKAAYLLAYKLGCKGVTVY----RDGSLSVQ 1615 Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 28/188 (14%) Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 G+N ++R G + +G + F QGGVR GA +WH ++ Sbjct: 756 TGLNFSKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDI 815 Query: 314 ESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQE 373 E + K N + + + V + + + L +G+ L +P + Sbjct: 816 EKFIHAKEKNT-GTNVLSNFNISVGLWEDFWEALKEGKRYPLINPRTGEKV--------- 865 Query: 374 EFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIA-P 432 + + LF + + + D N + +PA Sbjct: 866 -----------------KEIDPKSLFEELAYMAWAKADPGVVFFDVINRRNVLEPAKGEK 908 Query: 433 VRQSNLCL 440 +R +N C+ Sbjct: 909 IRATNPCV 916 Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 91/306 (29%), Gaps = 67/306 (21%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHI------QFYDGI--KTSDI 58 V KRDG + ++I + A + + + YDG +I Sbjct: 6 VMKRDGRIVPFDKERIRWAIQRAMLEVGVRDEKLLNRVVRRVVRRVNELYDGQIPNIENI 65 Query: 59 HET----IIKAAADLISRDAPDYQY--------------------------------LAA 82 + +++A +++ Y+ LA+ Sbjct: 66 QDIVELELMRAGLFDVAKAYILYRKKKAEIREEKKKILNKDKLDEIDKRFSLNALRVLAS 125 Query: 83 RLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE------------DYTEEEFKQ 130 R I + + + ++ ++ YD + + + E + Sbjct: 126 RYLIKNEKGEIIESPRELFERVAILAVIPDILYDERVFDKNGGHEQDVSAIERYRENLDE 185 Query: 131 MDTF--IDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRET 188 D I R + + + L + + ++ I E + ++ F NY E Sbjct: 186 YDGKFSIGRFRLNKWHFERLLNLYRELAEKGQMKLPIDE----VLKMLENGAFDNYEDE- 240 Query: 189 RLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYV 248 ++ ++ ++ TP + P S+C ++ D ++SI + + Sbjct: 241 ----IEEYFRLMTGQYFMPNTPALINSGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQ 296 Query: 249 SQRAGI 254 G Sbjct: 297 KAGGGC 302 >UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus barophilus MP RepID=B5IVI5_9EURY Length = 1042 Score = 258 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 133/349 (38%), Gaps = 62/349 (17%) Query: 439 CLEIALPTKPLNDVNDEN-GEIALCTLSAFNLGAI----------NNLDELEELAILAVR 487 E + + +E E C L++ NL + DE + + Sbjct: 601 VHEYVANSIISRNCGEEPLYEYESCNLASINLAKFVKYDDEGKPYFDWDEYAYVIQKVAK 660 Query: 488 ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 LD +D +P+P R +G+G++ A L K G Y+ + K E + Sbjct: 661 YLDNSIDVNKFPLPEIDYNTKLTRRIGVGMMGLADALFKLGIPYNSKEGFDFMRKATEYL 720 Query: 548 QYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 +Y K S E AK++G P ++++ Y +G LP++ + E + W+ L E IK Sbjct: 721 TFYAYKYSVEAAKKRGTFPLYDKSDYPEGKLPVEGFYH------REIWNLPWDELAEEIK 774 Query: 608 THGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY-------- 659 +G+RN+ ++ P+ + S I++ ++GIEP V K+ G V P + Sbjct: 775 KYGVRNAMVTTCPPTGSVSMIADTSSGIEPIFALVYKKSVTVGEFYYVDPVFEAELKKRG 834 Query: 660 ------------------------EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISA 695 E + + ++ D ++ +Q ++ S S Sbjct: 835 LYSDELLAKISNNYGSVQGLEEIPEDMQRVFVTAMDVHWLD-HILAQASIQLWLTDSASK 893 Query: 696 NTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQ 742 N ++ + L AYK G K T+Y RDG+ Q Sbjct: 894 TINMP------NDATVEDVKAAYLLAYKLGCKGVTVY----RDGSLSVQ 932 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 89/532 (16%), Positives = 164/532 (30%), Gaps = 103/532 (19%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVS---ISQVELRSHIQ---FYDG-------- 52 V KRDG + +I + A + + +V + YDG Sbjct: 6 VMKRDGRIVPFDEGRIRWAIQRAMWEVGVRDEKLLDKVVKDVVGRINELYDGKIPHIENI 65 Query: 53 --IKTSDIH-ETIIKAAA----------------------DLISRDAPDYQYLAARLAIF 87 I ++ + A D + + A R+ Sbjct: 66 QDIVELELMRNGLFDVAKAYILYRKKKAEIREEKKKILNKDKLDEIDKRFSINALRVLAS 125 Query: 88 -HLRKKAYGQF--EPPALYDHVVKM--VEMGKYDNHLLE------------DYTEEEFKQ 130 +L K G+ P L++ V + + YD+ + DY E + Sbjct: 126 RYLMKNEEGKIIESPRELFERVAILAVIPDLLYDDRVFSKEGGFAQDLKRVDYYREHLDE 185 Query: 131 MDTFIDHDRD--MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRET 188 D + R + + L + + ++ I E + L F Y +E Sbjct: 186 FDKKLSIGRFKLNKYHFERFLSLYQELAEKGQMKVSIDEIVKML----EDGAFDKYEKE- 240 Query: 189 RLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYV 248 ++ ++ ++ TP + P S+C ++ D ++SI + + Sbjct: 241 ----IEEYFRLMTNQIFMPNTPALINAGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQ 296 Query: 249 SQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPM 308 G G+N ++R G + +G + F QGGVR GA + Sbjct: 297 KMGGGTGVNFSKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEV 356 Query: 309 WHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF 368 WH ++E + K + N + + + V I + + L +G L +P + Sbjct: 357 WHPDIEKFIHAKEKN-IGTNVLSNFNISVGIWEDFWEALKEGRKYPLINPRTGKKV---- 411 Query: 369 FADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 + V LF + + + D N + + Sbjct: 412 ----------------------REVDPKALFEELAYMAWAKADPGVVFFDVINRRNVLEK 449 Query: 429 AIA-PVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELE 479 A +R +N C + E GEI + L F L N+D LE Sbjct: 450 AKGQKIRATNPC------VVGDTRILTEKGEIEIEKL--FELAKEANIDRLE 493 >UniRef50_B1I483 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I483_DESAP Length = 1121 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 106/301 (35%), Gaps = 38/301 (12%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVS 201 S + K E +Y ++ G + E+ + +A + R + ++F ++ Sbjct: 6 QLSDSGQKVFEARYAAKDE-QGRVTETFEQAVHRLARTTALAEKAQDRAAWEEKFAASIG 64 Query: 202 TFKISLPTPIMSGVRTPTR--QFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAG 259 TPI + + R Q +C ++ DSL+S+ T G+G N Sbjct: 65 GLLFVPSTPIWANIGKTDRPWQPGACFVLAVEDSLESMYQTLKDTAMVFKSGGGVGYNFS 124 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 IR GS +R + +G + + + + QGGVR GA+ + H E+ + Sbjct: 125 AIRPRGSMVRSTKGQASGVVELIRLYDASSGMVMQGGVRRGASMGILNIDHPEIIHFINS 184 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 K G + H + V + L + ED L +V Sbjct: 185 KR-----GGDITHFNLSVGVTDAFMEALERDEDWPLVFNGEV------------------ 221 Query: 380 TKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLC 439 Q V A EL+ L+ + + G I +D +P + +N C Sbjct: 222 ----------HQTVPARELWDLITESAHACGDPGIIFLDRLQRDNPVPEK--KINATNPC 269 Query: 440 L 440 + Sbjct: 270 V 270 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 69/394 (17%), Positives = 117/394 (29%), Gaps = 102/394 (25%) Query: 390 KQRVKAVELFSLMMQERASTG--RIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTK 447 +R E F+ + G +Y V N FD C E P Sbjct: 599 YKRDLNRERFTATVLCVEEDGIEDVYDVQVPGINA---FDANGIVAHN---CGE--QPLS 650 Query: 448 PLNDVNDENGEIALCTLSAFNLGAI---------NNLDELEELAILAVRALDALLDYQDY 498 P C L + NL + + + L + L +R LD L+D +Y Sbjct: 651 PGE----------SCLLGSVNLARMLKPGRDGYVVDWELLRDTVRLGIRFLDNLIDVAEY 700 Query: 499 PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNEL 558 P+ R +G+G L K G Y F+A+Q L S EL Sbjct: 701 PLEFIAEATRATRKVGLGYTGLHDLLIKMGLPYDAEEGRRFAGTVFKAVQDAALAYSREL 760 Query: 559 AKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSA 618 A E+G P + + + RN+ Sbjct: 761 AGERGCFPEWERS-----VFHPHEK---------------------------RRNAACIT 788 Query: 619 LMPSETSSQISNATN-GIEPPRGYVSIKAS------------------------------ 647 + P+ + + I+ GIEP K + Sbjct: 789 VAPTGSVTTIAGCEGYGIEPIFAVAYTKDTDVAGSFEVFSPLFLEACERLGVSREVMSEV 848 Query: 648 -KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPS 706 + G + V L ++ E+ D ++ + +QK++ ++S N S Sbjct: 849 ARRGGCQGVEGVPPELARIFKGAQEISPRD-HILMQAEVQKYVCNAVSKTINLPNS---- 903 Query: 707 GKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGA 738 + + AY+ G+K T++ + G Sbjct: 904 --ATIHDIETCYRLAYELGLKGVTVFRDGCKQGV 935 >UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyrococcus RepID=Q9UYA0_PYRAB Length = 2122 Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats. Identities = 75/337 (22%), Positives = 128/337 (37%), Gaps = 61/337 (18%) Query: 450 NDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVRALDALLDYQDYP 499 N + E C L++ NL + DE + + LD +D +P Sbjct: 1679 NCGEEPLYEYESCNLASINLAKFVKYDENGKPYFDWDEYAYVIQKVAKYLDNSIDVNKFP 1738 Query: 500 IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELA 559 +P R +G+G++ A L K G Y+ K E + +Y K S E A Sbjct: 1739 LPEIDYNTKLTRRIGVGMMGLADALFKLGIPYNSEEGFKFMRKVTEYLTFYAYKYSIEAA 1798 Query: 560 KEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSAL 619 K++G P + +T Y KG LP++ + E + W+ L E IK +G+RN+ ++ Sbjct: 1799 KKRGTFPLYEKTGYPKGELPVEGFYH------PEIWNLPWDKLVEEIKKYGVRNAMVTTC 1852 Query: 620 MPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY-------------------- 659 P+ + S I++ ++GIEP V K+ G V P + Sbjct: 1853 PPTGSVSMIADTSSGIEPIFALVYKKSVTVGEFYYVDPVFEAELKRRGLYSEELLKKISD 1912 Query: 660 ------------EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSG 707 E + + ++ D +L +Q ++ S S N Sbjct: 1913 NYGSVQGLEEIPEDMRRVFVTALDIHWLD-HLLAQANIQMWLTDSASKTINMI------N 1965 Query: 708 KVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQ 742 + ++ + L A+ G K T+Y RDG+ Q Sbjct: 1966 EATVEDVKAAYLIAHFLGCKGVTVY----RDGSLSVQ 1998 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 53/166 (31%), Gaps = 28/166 (16%) Query: 276 TGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDY 335 +G + F QGGVR GA +WH ++E + K + N + + + Sbjct: 1161 SGPVSFMHLIDAVSDVIKQGGVRRGANMGILEIWHPDIEKFIHAKEKN-IGTNVLSNFNI 1219 Query: 336 GVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKA 395 V I + + L +G+ L +P + + Sbjct: 1220 SVGIWEDFWEALKEGKKYPLINPRT--------------------------GEVVKEIDP 1253 Query: 396 VELFSLMMQERASTGRIYIQNVDHCNTHSPFDPA-IAPVRQSNLCL 440 LF + + + D N + A P+R +N C+ Sbjct: 1254 KTLFEELAYMAWAKADPGVIFFDIINRRNVLKEAKGGPIRATNPCV 1299 Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 90/302 (29%), Gaps = 59/302 (19%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVS---ISQVELRSHIQ---FYDG-------- 52 V KRDG + +I + A + + +V + YDG Sbjct: 6 VMKRDGRIVPFDESRIRWAVQRAMWEVGVRDERKLDEVVKNIVKRINELYDGKIPHIENI 65 Query: 53 --IKTSDIHET-IIKAAADLI----------------------SRDAPDYQYLAARLAIF 87 I ++ + + A I + A R+ Sbjct: 66 QDIVELELMRAGLFEVAKAYILYRKKKAEIREEKKRILNKKELDEIDKRFSINALRVLAS 125 Query: 88 HLRKKAYGQFEPPALYDHVVKM-----VEMGKYDNHLLED--YTEEEFKQMDTFIDHDRD 140 K+ + + ++ + YD + + +++ K+++ ++++ Sbjct: 126 RYLKRDENGNIIESPRELFERVSILAVIPDLLYDERVFDKDGNYKQDLKRVEYYLENFEK 185 Query: 141 MTFSYAAVKQLEGKY--------LVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQY 192 Y+ K KY + G++ S ++ F Y +E Sbjct: 186 FDGKYSIGKYKLNKYHFERMVNLYRELAEKGKMKVSIDEFLSMLERGEFDKYEKE----- 240 Query: 193 VKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRA 252 ++ ++ ++ TP + P S+C ++ D ++SI + + Sbjct: 241 IEEYFKLMTNQVFMPNTPALINSGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKMGG 300 Query: 253 GI 254 G Sbjct: 301 GC 302 >UniRef50_B6IYQ9 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodospirillum centenum SW RepID=B6IYQ9_RHOCS Length = 1191 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 101/292 (34%), Gaps = 43/292 (14%) Query: 154 KYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMS 213 KY ++ + + + VA L + P + +RF A+ F+ I++ Sbjct: 29 KYRLKAPDGAPVDATVADTWTRVARALAA--PERDPAAWEERFRSALEGFRFLPAGRILA 86 Query: 214 GVRTPTR-QFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGG 271 G T +C ++ D + I A + Q GIG + +R G+P+ G Sbjct: 87 GAGTRRTVTLFNCFVMGTVPDDMGGIFAHLREAALTLQQGGGIGYDFSTLRPKGAPVAGV 146 Query: 272 EAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVR 331 A +G + F + + ++ G R GA H ++E + K G R+R Sbjct: 147 GADASGPVSFMDVWDSMCRTIMSAGSRRGAMMATLRCDHPDIELFIDAKREPG----RLR 202 Query: 332 HMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQ 391 + + V + + L D F + Sbjct: 203 NFNLSVLATDDFMAAVREDRPWPLRF-------------DGRVF---------------R 234 Query: 392 RVKAVELFSLMMQ---ERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 V A L+ +M+ + A G I+I ++ N S + + +N C+ Sbjct: 235 TVPARALWDRIMRATYDYAEPGVIFIDRINEQNNLSYCET----ISATNPCV 282 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 88/378 (23%), Positives = 144/378 (38%), Gaps = 71/378 (18%) Query: 391 QRVKAVELFSLMMQERASTGR--IYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKP 448 +R E ++ + E G ++ + N F+ V C E LP Sbjct: 614 RRRPDREDWTAEVAELVPDGEAEVFDVRIPGANA---FEANGLVVHN---CGEQPLPP-- 665 Query: 449 LNDVNDENGEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDALLDYQDY 498 C L + NL A+ + +EL + LAVR +D ++D + Sbjct: 666 ----------YGACLLGSVNLAALVRDPFTPAARLDREELARVVPLAVRMMDNVVDVSRF 715 Query: 499 PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNEL 558 P+ A + A +R +G+GV A L G RY + LT + AIQ + S L Sbjct: 716 PLEAQEAEAQAKRRIGLGVTGLADALILCGVRYGSEAGVRLTEEWLRAIQVAAYRTSAAL 775 Query: 559 AKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSA 618 A E+GA P F+ + L+ L D +RE+I G+RN+ +++ Sbjct: 776 AAEKGAFPLFDREAF-------------LERPMVRALPPD---VREAIAAQGVRNALVTS 819 Query: 619 LMPSETSSQISN-ATNGIEPPRGYVSIKA--SKDG-------------ILRQVVPDYEHL 662 + P+ T S + ++GIEP Y +A DG + R+ + L Sbjct: 820 IAPTGTISLFAGNVSSGIEPVFAYEYQRAVLMPDGSRRTETVQDLAYRLYRERMGPDAPL 879 Query: 663 HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAY 722 DA+ + +L + Q+ +D +IS N +P + AY Sbjct: 880 TDAFVDAQSLEPA-AHLVMQAAAQRHVDSAISKTINCP------ADLPFEAFKDVYRQAY 932 Query: 723 KFGVK--TLYYQNTRDGA 738 + G K T Y N G+ Sbjct: 933 ELGCKGCTTYRPNAVTGS 950 >UniRef50_A1TJY2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=3 Tax=Comamonadaceae RepID=A1TJY2_ACIAC Length = 1226 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 100/401 (24%), Positives = 154/401 (38%), Gaps = 74/401 (18%) Query: 369 FADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 F D ++ ERL T +R E F+ +Q+ G + +V + H+ FD Sbjct: 629 FEDADKAERLATALSG-----YRRALNREPFTATVQDVLPDGHEDVYDVTVADCHA-FDA 682 Query: 429 AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------------NNLD 476 V C E LP+ C L L + D Sbjct: 683 NGLCVHN---CGEQPLPS------------YGCCDLGPIILPRFVRHPFGFAGEPAFDFD 727 Query: 477 ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 VRALD +LD +P+P + + +R +G+G LA RY + Sbjct: 728 AFAASVATQVRALDNVLDVTFWPLPQQRAESAAKRRIGVGFTGLGNTLAMLRLRYDTDAG 787 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 + + E ++ AS ELAKE+G P F+ A G L T+ L Sbjct: 788 RAMAMRIAECMRDAAYAASVELAKEKGVFPKFD----AAGYLAPGTFASRLPA------- 836 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQ--ISNATNGIEPPRGYVSIKASKDG---- 650 AL+E+I+THG+RNS L ++ P+ T S NA+NGIEPP + + ++ Sbjct: 837 ----ALQEAIRTHGIRNSHLLSIAPTGTVSLAFADNASNGIEPPFSWTYTRRKREADGST 892 Query: 651 -----------ILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNY 699 + + D L D + +MP G++ ++ +Q FID +IS N Sbjct: 893 SEYAVEDHAWRLYGALGGDVNALPDYFVSALQMPAA-GHIAMMEAVQPFIDTAISKTVNM 951 Query: 700 DPSRFPSGKVPMQQLLKDLLTAYKFGVKTL--YYQNTRDGA 738 P + L A++ +K L Y N GA Sbjct: 952 P------ADYPYEDFKNLYLHAWRARLKGLATYRPNAILGA 986 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 95/303 (31%), Gaps = 31/303 (10%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKIS 206 ++ L KYL E LY VA L S E R RF + I Sbjct: 23 SLDVLREKYLKPGEADAET------LYRRVARALASVEAPEVREAIEARFLANLRAGAIG 76 Query: 207 LPTPIMSGVRTP-TRQFSSCVLIECGDSLDS--------INATSSAIVKYVSQRAGIGIN 257 IMS T +C + GD + I + + + G+G + Sbjct: 77 -AGRIMSAAGTAIQATLINCFVQPVGDCIQGMDEGGYPGIYEALREAAETMRRGGGVGYD 135 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 RIR G+ ++G + +G + F + + G R GA + H +V + Sbjct: 136 FSRIRPRGAEVKGTASMASGPCSYINVFDQSCATVESAGARRGAQMGVLRIDHPDVLDFI 195 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFER 377 K G R + + V + +L L P+ Sbjct: 196 TAKRTPG----RWNNFNVSVGVPDAFVQAVLDDAPWELVHPA----------RPGAALRE 241 Query: 378 LYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSN 437 + D + + A EL+ +M+ I +D NT + + +N Sbjct: 242 EGARQRADGQWVYRTLPARELWDTIMRSAYDFAEPGILFLDRVNTDNNL-AYCESIAATN 300 Query: 438 LCL 440 C+ Sbjct: 301 PCV 303 >UniRef50_D2LPU1 Ribonucleotide reductase large subunit n=3 Tax=Euryarchaeota RepID=D2LPU1_9EURY Length = 355 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 66/352 (18%), Positives = 124/352 (35%), Gaps = 93/352 (26%) Query: 430 IAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN-----LDELEELAIL 484 + + +N C E P P C L + NL D+L + Sbjct: 1 MGEIESTNPCGE--QPLLPYE----------SCNLGSINLSLFVENGKIKWDDLRDTVHT 48 Query: 485 AVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTF 544 AV +D ++D +YP+P R +G+GV+ +A L K G Y A L K Sbjct: 49 AVHFMDNVIDANNYPLPQVAEMTRRSRKIGLGVMGWAEMLIKLGIPYDSEEAVELAEKVM 108 Query: 545 EAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRE 604 + I +AS +LA+++G P + + + K + Sbjct: 109 KFINEESHRASMKLAEKRGVFPAWEGSEWWKKGMK------------------------- 143 Query: 605 SIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD--------------- 649 +RN+T + + P+ T S I+ ++ IEP I+ D Sbjct: 144 ------IRNATTTTIAPTGTISIIAGTSSSIEPLFAIAFIRRVLDGQELLEVNPLFEEIM 197 Query: 650 -----------------GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQS 692 G ++ + E++ + ++ ++++ QK++D + Sbjct: 198 KREGLYSEELMHKVAETGSVQHIDDVPENIKRLFRTAHDIDPV-WHVRMQAAFQKYVDNA 256 Query: 693 ISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQ 742 +S N + + + A+K K T+Y RDG+++ Q Sbjct: 257 VSKTVNLRH------DASISDVEDTYILAWKLKCKGITIY----RDGSKNVQ 298 >UniRef50_Q122S1 Ribonucleoside reductase n=3 Tax=Proteobacteria RepID=Q122S1_POLSJ Length = 1189 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 98/300 (32%), Gaps = 31/300 (10%) Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPT 209 L+ KYL + LY VA L S P R ++ F + + I Sbjct: 22 VLKEKYLKPGENG------VEDLYRRVARALASVEPEAARAEHEALFLENLHAGAIG-AG 74 Query: 210 PIMSGVRTP-TRQFSSCVLIECGDSLDS--------INATSSAIVKYVSQRAGIGINAGR 260 IMS T +C + GD + I + + + G+G + R Sbjct: 75 RIMSAAGTSIQATLINCFVQPVGDCIQGMDDGGYPGIYEALREAAETMRRGGGVGYDFSR 134 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 IR G+ ++ + +G + F + + G R GA + H +V + K Sbjct: 135 IRPRGAEVKATASMASGPCSYINVFDQSCSTVESAGARRGAQMGVLRIDHPDVFEFITAK 194 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 G R + + V ++ L + L A Q F+R Sbjct: 195 RTPG----RWNNFNVSVGVSDAFMQALGDDQPWELV----HRAKPGARLIAQGAFQR--- 243 Query: 381 KYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 D Q + A EL+ +M+ I +DH N + + +N C+ Sbjct: 244 ---ADGLWVYQTLAASELWDTVMRSAYDFAEPGILFLDHINQDNNLR-YCESIEATNPCV 299 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 79/363 (21%), Positives = 133/363 (36%), Gaps = 45/363 (12%) Query: 395 AVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND 454 E F++ ++ G + FD V C E LP D+ Sbjct: 638 NRERFTVTVESLTEEGSEDV-FDVTVADIHAFDANGLYVHN---CGEQPLPPYGCCDLGP 693 Query: 455 ENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLG 514 + FN + D + VRALD +LD +P+P + + +R +G Sbjct: 694 IILTRFVRNPFGFNGVPDFDFDAFGKSVTTQVRALDNVLDLTFWPLPQQQAESAAKRRIG 753 Query: 515 IGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYA 574 +G L RY + + ++ AS LAKE+GA F+ A Sbjct: 754 VGFTGLGNALVMLCLRYDAPEGREMAARIAVCMRDAAYAASVALAKEKGAFLKFD----A 809 Query: 575 KGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQ--ISNAT 632 +G L T+ L L+++I+ HG+RNS L ++ P+ T S NA+ Sbjct: 810 EGYLAPGTFANRLPA-----------GLQQAIRAHGIRNSHLLSIAPTGTVSLAFADNAS 858 Query: 633 NGIEPPRGYVSIKASKDG---------------ILRQVVPDYEHLHDAYELLWEMPGNDG 677 NGIEP ++ + ++ + R++ D + L + EM Sbjct: 859 NGIEPSFSWMYRRRKRESDGSTTDYAVEDHAWRLYRELGGDVDRLPGYFVSALEMSAA-S 917 Query: 678 YLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL--YYQNTR 735 ++ ++ +Q F+D +IS N A++ +K L Y N Sbjct: 918 HIAMMEAVQPFVDTAISKTVNVPV------DYAYDDFKGLYQQAWRARLKGLATYRPNAI 971 Query: 736 DGA 738 GA Sbjct: 972 LGA 974 >UniRef50_Q0A8L7 Ribonucleoside-diphosphate reductase n=3 Tax=Ectothiorhodospiraceae RepID=Q0A8L7_ALHEH Length = 1095 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 63/321 (19%), Positives = 110/321 (34%), Gaps = 29/321 (9%) Query: 140 DMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP-RETRLQYVKRFYD 198 D+ A+ + KY ++++ I E+ + VA L ++ R + +RF Sbjct: 16 DIPLQSASADIWDKKYRLKSKDGQVIDETVDHTWQRVARALAEVEKTKKLREHWYERFLW 75 Query: 199 AVSTFKISLPTPIMSGVR----TPTRQFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAG 253 A+ I I S P +C + DS+D I + G Sbjct: 76 ALRRGAI-PAGRITSNAGAWAHKPATSTINCTVSGTIQDSMDDILQKVHEAGLTLKAGCG 134 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 IG +R G+ + G A+ +G + F + + S G R GA + + H +V Sbjct: 135 IGYEFSTLRPRGAYVSGAGAYTSGSLSFMDIYDRMCFTVSSAGGRRGAQMATFDVGHPDV 194 Query: 314 ESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP--SDVPGLYDAFFAD 371 + K G R+R + + I + + L P + D Sbjct: 195 LDFIRAKREDG----RLRQFNLSLLITEEFMQAVEDDAQWPLAFPLTKHEAETDNIDLTD 250 Query: 372 QE-EFERLYTKYEK--------DDSIRKQRVKAVELFSLMMQER---ASTGRIYIQNVDH 419 E R + E + VKA L+ ++M A G I I V+ Sbjct: 251 SEQVIWREWPTTEPYISDEQGLVACRIYRTVKARRLWDMIMTSTYDFAEPGFILIDRVNE 310 Query: 420 CNTHSPFDPAIAPVRQSNLCL 440 N + + +R +N C+ Sbjct: 311 MNNNWFCED----IRATNPCV 327 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 119/359 (33%), Gaps = 78/359 (21%) Query: 424 SPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------N 473 + FD C E LP C L + NL Sbjct: 691 NTFDANGLHAHN---CGEQPLPP------------YGACLLGSVNLTKFVRDPFTEKARF 735 Query: 474 NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSD 533 + E E+ + R LD +++ P+ +R +R G+G + L +Y + Sbjct: 736 DWQEYAEVVSVFTRMLDNVVEINGLPLDEQRREIERKRRHGMGFLGLGSTLTMLRMKYGE 795 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNET-------TYAKGILPIDTYKKD 586 + T K + + ELA+E+G P +ET + + +D YK Sbjct: 796 AESLAFTEKVSREMALAGWRTGVELAEEKGPAPIMDETYTVDEAMLAKRPEMAVDGYKVG 855 Query: 587 LDTIANEPLHYDWE-----------ALRESIKTHGLRNSTLSALMPSETS--SQISNATN 633 D + L + L E+I G R S +++ P+ T S +NA+N Sbjct: 856 -DKVKGRVLLARYSHYMQRVAEVDAELVEAIAEKGARFSHHTSIAPTGTISLSLANNASN 914 Query: 634 GIEPPRGYVSIKAS-KDGI------------------------LRQVVPDYEHLHDAYEL 668 GIEP + + ++G + P+ +L D + Sbjct: 915 GIEPSFAHHYFRNVIREGRKSKEKVDVFSFELLAYRHFIDPEAVPSTDPETRNLPDYFIT 974 Query: 669 LWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK 727 + ++ + QK++D SIS N P + AY+ G+K Sbjct: 975 A-DSVTPKQHVDIQAAAQKWVDSSISKTANVP------TDYPYEDFKDIYRYAYQQGLK 1026 >UniRef50_B8GMT3 Ribonucleoside-diphosphate reductase n=3 Tax=Thioalkalivibrio RepID=B8GMT3_THISH Length = 1137 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 104/312 (33%), Gaps = 23/312 (7%) Query: 146 AAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP-RETRLQYVKRFYDAVSTFK 204 AA + KY +++ + ++ VA L R + +RF A+ Sbjct: 19 AARDVWDRKYRLRDATGRPLEDTPAETLARVARALADVEATPALREHWRERFLWAL-NHG 77 Query: 205 ISLPTPIMSGVR----TPTRQFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAG 259 I++ +C + D+LD I + AGIG Sbjct: 78 ALPAGRILANAGARDHKRGTSTINCTVSGTIHDTLDEILGKLREAGLTLQSGAGIGYEFS 137 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 +R G+ + G A +G + F + ++ + G R GA + + H +V + Sbjct: 138 TLRPKGAWVAGAGARSSGPLSFMDVYDQMCRTIASAGDRRGAQMATFHIGHPDVLEFIEA 197 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGL--YDAFFADQE-EFE 376 K G R+R + + + L G D L P A D + Sbjct: 198 KREPG----RLRQFNLSLLVPDAFMAALDAGADWPLAFPLSPAEQARTGADLQDPKQVVW 253 Query: 377 RLYTKYE--------KDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 R + + E + +Q + A L+ +M+ + +D N + + Sbjct: 254 RHWPETEGYITDGHGRVACRVQQWIPAAALWEQVMRATYDHAEPGVIFIDRVNAENN-NG 312 Query: 429 AIAPVRQSNLCL 440 +R +N C+ Sbjct: 313 FCESIRAANPCV 324 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 74/402 (18%), Positives = 122/402 (30%), Gaps = 83/402 (20%) Query: 390 KQRVKAVELFSLMMQERASTGR--IYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTK 447 +R E F + G +Y + N FD ++ C E LP Sbjct: 656 YRRRPNRERFVARVASVTVDGEEPVYDVRIPGINA---FDANG---FHTHNCGEQMLPP- 708 Query: 448 PLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVRALDALLDYQD 497 C L + +L + D E+ + R LD +++ Sbjct: 709 -----------YGACLLGSVDLTRFVQHPFTGKLRFDWDTYREVVAVFTRMLDNVVEIHG 757 Query: 498 YPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNE 557 P+ R G+G + LA G RY A T + + + E Sbjct: 758 LPLAQQAEALERTRRHGMGFLGLGSALAMMGIRYDSPEAAAFTERAARELALTGWRTGLE 817 Query: 558 LAKEQGA-----------------CPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 LA+E+G P E G + + + Sbjct: 818 LAREKGPAPLMYERFTVTEHLLARYPALAEDGIRVGDVLPGRVLHARYSPYMRRIAGLDP 877 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQI--SNATNGIEPPRGYVSIKA--SKDGILRQVV 656 AL ++ G R + SA+ P+ T + +N +NGIEP + ++ +DG R V Sbjct: 878 ALVAALAEEGARFTHHSAIAPTGTIALSFGNNVSNGIEPSFAHTYLRNILGRDGATRDTV 937 Query: 657 PD-----------------------YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSI 693 P L +A+ ++ +L + Q +ID +I Sbjct: 938 PVTAYELLAWRALVDPDADPEAKQGPHRLPEAFVTAGDI-APRAHLAIQAAAQPWIDAAI 996 Query: 694 SANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQN 733 S N P + A+ G+K T Y N Sbjct: 997 SKTINVP------TDCPFEDFRDLYREAHALGLKGCTTYRLN 1032 >UniRef50_O55716 IIV-6 RIR1 intein n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR1_IIV6 Length = 959 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 69/342 (20%), Positives = 119/342 (34%), Gaps = 62/342 (18%) Query: 132 DTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQ 191 D ID RD F +K+L Y+++ S Q + V + T Sbjct: 3 DIIIDLSRDSKFDELGLKRLRESYMMREET------SPQERFAYVCKQV------GTDRD 50 Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQR 251 + +R Y+ S +SL TPI+S + SC L D+ + + T S + + Sbjct: 51 HSQRLYEYTSKHWLSLSTPILSFGKANHGLPISCYLSWIEDTKEGLIDTLSEVNQLSM-- 108 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 G +G IR + TG + + + Q GVR G+ ++ H Sbjct: 109 ------LGGGVGVGVGIRTSDNKSTGVMSHLNTYDACSLAYKQDGVRRGSYAMYLNNNHP 162 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLK-------GEDITLFSPSDVPGL 364 +V + ++ G R ++ +G+ I+ + K + L P Sbjct: 163 DVLQFIEMRKPTGDHNIRCLNLHHGLNISDEFMELIEKCDGGGNIDDTWNLIDPHT---- 218 Query: 365 YDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS 424 + V A +L+ +++ R TG YI +D CN H Sbjct: 219 -----------------------KKITTVGARDLWQRILETRMKTGEPYICFIDTCNKHM 255 Query: 425 P--FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTL 464 ++QSNLC P + E+G+ + L Sbjct: 256 YDFQKKKGLTIKQSNLC------VAPETMILTEDGQFPIKDL 291 Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats. Identities = 86/472 (18%), Positives = 150/472 (31%), Gaps = 123/472 (26%) Query: 328 NRVRHMDYGVQINKLMYTRLLKGEDITLF-------SPSDVPGLYDAFFAD-------QE 373 R++ + G+ + + L E IT P ++ F + ++ Sbjct: 497 KRIQLLLIGMGVTSKITK--LHDEKITTMPDGKGGQKPYSCKPIWRLFISSSGLYHLSEQ 554 Query: 374 EFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIY--IQNVDHCNTHSPFDPAIA 431 FE K+E R E F +++ TGR+ + N F+ + Sbjct: 555 GFETRRLKWEPRQPQR-----NAERFVEVLKVN-KTGRVDDTYCFTEPINHAGVFNGIL- 607 Query: 432 PVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDA 491 + C EI LPT ++ A+C LS+ NL + + + + LD Sbjct: 608 ----TGQCSEIILPT--------DSTRTAVCCLSSLNLEYYDEWKDNDLFIKDVMEMLDN 655 Query: 492 L----LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 ++ I A A R++GIGV+ F +L + + A L F + Sbjct: 656 ALTIFIEKAPPTISRAVNSAKKERSIGIGVLGFHSFLQQKNISFESDEAAKLNIDIFTKL 715 Query: 548 QYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 + IDT+ L ++ P E + Sbjct: 716 R-----------------------------SKIDTFNLVLGSLRGSP---------EDAE 737 Query: 608 THGLRNSTLSALMPSETSSQISN-ATNGIEPPRGYVSIKASKDGILRQVVPDYEHL---- 662 G R A+ P+ TSS I + +EP R + + G + Sbjct: 738 GTGRRFCCTMAVAPTATSSIIMGNTSPSVEPFRANAYRQDTLSGSFLNKNRYLSRILSQR 797 Query: 663 --------------------------------HDAYELLWEMPGNDGYLQLVGIMQKFID 690 ++ +E+ ++ QK+ID Sbjct: 798 LNVKEINEVWSNIVSNGGSVQQLPNNLLSEQEKQVFKTAFEI-NQKWVIKHAADRQKYID 856 Query: 691 QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQ 742 QS S N P + ++L L A+K G+KTLYY + A+ + Sbjct: 857 QSQSINLFLKP------DIHKRELHSLHLNAWKSGLKTLYYLRSEKIADADK 902 >UniRef50_A3JKM6 Ribonucleoside reductase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JKM6_9ALTE Length = 1087 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 56/314 (17%), Positives = 112/314 (35%), Gaps = 28/314 (8%) Query: 146 AAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKI 205 A++ KY ++ + + + Y VA L ++ R ++ K F A+ I Sbjct: 17 ASLDIWNSKYQLKTKTGDAVDKDILATYERVAQALSEVENKDLRAKHYKDFAWALKHGAI 76 Query: 206 SLPTPIMSGVR----TPTRQFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGR 260 I+S P +C + DS++ I + + GIG Sbjct: 77 -PAGRIISNAGAQSHKPATSTINCTVSGNINDSMNDILGKNHEAGLTLKAGCGIGYEFST 135 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 +R G+ + G A +G + F F + S G R GA + + H ++ + K Sbjct: 136 LRPRGAYVAGAGATTSGPLSFMDIFDRMCFTVSSAGGRRGAQMATFDIHHPDIIDFIQAK 195 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 G R+R + + I + + D +L P + + + + +Y Sbjct: 196 REDG----RLRQFNLSLLITEDFINAVRDNADWSLSFPVTDKEVEEEDLDLTDTAKFVYR 251 Query: 381 KY--------EKDDSI---RKQRVKAVELFSLMM---QERASTGRIYIQNVDHCNTHSPF 426 + + + + +KA ++ +M + A G I I V+ N + Sbjct: 252 DFPVVKDYVMNAEGKVACRIYRTLKAQFIWDTIMTSTYDYAEPGFILIDKVNQMNNNWFC 311 Query: 427 DPAIAPVRQSNLCL 440 + +R +N C+ Sbjct: 312 ED----IRATNPCV 321 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 114/344 (33%), Gaps = 75/344 (21%) Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN----------LDELEELAILAVRA 488 C E LP C L + NL + ++ +++ + R Sbjct: 695 CGEQPLPP------------YGSCLLGSVNLTMFVDDPFTDKASFNYEKYKKVVGIFTRM 742 Query: 489 LDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQ 548 LD +++ P+ + +R G+G++ LA Y + T + Sbjct: 743 LDNVVEINGLPLAQQRHEITYKRRHGMGILGLGSTLAMLRMPYGSEESVVFTEDVVREMA 802 Query: 549 YYLLKASNELAKEQGACP----WFNETTYAKGILPI---DTYKKDLDTIANEPLHYDWE- 600 + S L KE+GA P F T G P D Y D + LH + Sbjct: 803 VEGWRQSLALGKEKGAAPIMDDEFEITPKLLGKCPQLTADGYNLG-DKLKGRVLHAKYSR 861 Query: 601 ----------ALRESIKTHGLRNSTLSALMPSETS--SQISNATNGIEPPRGYVSIKA-S 647 L + G R + +++ P+ T S +NA+NGIEP + + Sbjct: 862 YMQRIAEVEPELVAQLAEKGGRFTHHTSIAPTGTISLSLANNASNGIEPSFSHHYARNII 921 Query: 648 KDGILRQVVPDY------------------------EHLHDAYELLWEMPGNDGYLQLVG 683 ++G + D + L D + ++ ++ + Sbjct: 922 REGRKTKEKVDVFSFELLAYRHLSNPGAMPFSDDADKKLPDYFTTSDDVTPA-QHVDIQA 980 Query: 684 IMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK 727 Q +ID SIS N P+ F P + L A+ G+K Sbjct: 981 AAQLWIDSSISKTANV-PTDF-----PYKNFKDIYLYAFDKGLK 1018 >UniRef50_Q8UEM4 Vitamin B12-dependent ribonucleotide reductase n=163 Tax=root RepID=NRDJ_AGRT5 Length = 1272 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 86/602 (14%), Positives = 153/602 (25%), Gaps = 149/602 (24%) Query: 186 RETRLQYVKRFYDAVSTFKISLPTPIMSGVRT---------------------------- 217 E + ++T +++ +P Sbjct: 130 EEDASAFKDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPFTGKLTKSKS 189 Query: 218 --PTRQFSSCVLIECGDSL---DSINATSSAIVKYVSQRAGIGINAGRI----------- 261 Q +C + D L I + +G G N + Sbjct: 190 AYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSYLRGEGEKLSGGG 249 Query: 262 -------------RALGSPIRGGEAFHTGCIPFY-------------KHFQTAVKSCSQG 295 RA G+ GG + K + + Sbjct: 250 KSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWKVNEEQKVAALVT 309 Query: 296 GVRGGA--------ATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRL 347 G + A A + + + KN R D + + R+ Sbjct: 310 GSKIVAKHLKAIMKACVNCEADNGDCFD--PAKNPALKREIRAAKKDM---VPENYVKRV 364 Query: 348 LK--------------GEDI--------TLFSPSDVPGLYDAFFADQEEFERLYTKYEKD 385 ++ D + + ++ L D F E KD Sbjct: 365 IQFAEQGYKDIQFKTYDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAVENDGNWNLTARKD 424 Query: 386 DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALP 445 + + +KA +L+ + ++ + N PA P+R SN C E Sbjct: 425 GKV-MKTLKARDLWEKISHAAWASADPGLHFNTTMNDWHT-SPAEGPIRASNPCSEYMF- 481 Query: 446 TKPLNDVNDENGEIALCTLSAFNLGAINNLD-------ELEELAILAVRALDALLDYQDY 498 + C L++ NL + + E L L+ + + Sbjct: 482 -----------LDDTACNLASLNLLQFKDAKTKRIDIADYEHAVRLWTVVLEVSVMMAQF 530 Query: 499 PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNEL 558 P + RTLG+G N L G Y + + S E+ Sbjct: 531 PSRQIAERSYEYRTLGLGYANIGGLLMSSGIPYDSDEGRAIAGALTAIMTGVSYATSAEM 590 Query: 559 AKEQGACPWF--------------NETTYAKGILPIDTYKKDLDTIANEPLHYD------ 598 A E G P F + + + I + D Sbjct: 591 AGELGPFPSFAPNRDNMLRVIRNHRRAAHGQSEGYEGLSVNPVALIHADCTDQDLVAHAT 650 Query: 599 --WEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQV 655 W+ E + HG RN+ + + P+ T + + T GIEP V K G ++ Sbjct: 651 AAWDKALELGEKHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKI 710 Query: 656 VP 657 + Sbjct: 711 IN 712 Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 12/69 (17%) Query: 676 DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQN 733 + +++++ Q FI +IS N ++ + ++K +K LY Sbjct: 863 ESHIRMMAAAQPFISGAISKTINMP------NDATVEDCGAAYMLSWKLALKANALY--- 913 Query: 734 TRDGAEDAQ 742 RDG++ +Q Sbjct: 914 -RDGSKLSQ 921 >UniRef50_Q91TP4 T45 n=1 Tax=Tupaiid herpesvirus 1 RepID=Q91TP4_TUHV1 Length = 1035 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 84/504 (16%), Positives = 176/504 (34%), Gaps = 60/504 (11%) Query: 167 ESAQFLYILVAACLFSNYPR-------------ETRLQYVKRFYDAVSTFKISLPTPIMS 213 E + + VA L + + +++ D + + ++ ++ Sbjct: 433 ECPLAVAVRVALALAVRSTEVCYGGSYLKVLAMDETQEVFEQYLDDLYSERLLGSVNALA 492 Query: 214 GVRTPTRQFSSCVLIECGD-SLD-SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGG 271 D ++ ++ + ++ + + +N R G + Sbjct: 493 QAGLNESAPQEGFSGRIDDQDVEVWLDENAQRLLGMMKDGLALSLNVT--RGYGHAVD-- 548 Query: 272 EAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVR 331 + C R +++ +WH + ++L L + Sbjct: 549 ---------VIYLLAAQARLCRSRQRRATFVRVYFDLWHTQAAAILELIERSASG---LD 596 Query: 332 HMDYGVQINKLMYTRLLKGED-ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK 390 +++ V + L + R + T+F L + EF +Y + E++ Sbjct: 597 GVEFAVNVPNLFFERERHAKSHWTMFPYEHCAELNERT---GAEFATVYVQKERNRC--G 651 Query: 391 QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD------PAIAP-VRQSNLCLEIA 443 V L++ +++ TGR+ + D+ + P P + P V N+C+E Sbjct: 652 WSVSLGWLYARLVRAVL-TGRLAVVFPDNVGVYGPLLGTMQNVPTLGPHVDMLNVCVERH 710 Query: 444 LPTKPLNDVNDE-------NGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQ 496 +P N D+ +G ++ L + G +L L AV A D LL+ + Sbjct: 711 VPVVRFNVNVDDCYEENVPDGRVSEMDLYIVSSGLAISLCHFRRLVRAAVVAGDLLLE-E 769 Query: 497 DYPI--PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKA 554 + P R L +G L + G Y A + + E + Y L+ Sbjct: 770 IFEQQGPQLGVAFQRYRPLCVGYSGLHTLLLRVGVEYDSDEAVTVAERLAEHLYYEALRT 829 Query: 555 SNELA-KEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 S +L AC WF T Y++G+ + + + ++ W+ALRE + G+RN Sbjct: 830 SVDLCIAGLPACSWFGHTRYSRGLFAFERHGRRPCSVPERL----WDALREDMSAFGMRN 885 Query: 614 STLSALMPSETSSQISNATNGIEP 637 + L +L P ++++ + P Sbjct: 886 AQLVSLGPGWEQARLAGVSASFYP 909 >UniRef50_A4L245 Ribonucleotide reductase large subunit n=1 Tax=Gryllus bimaculatus nudivirus RepID=A4L245_9VIRU Length = 683 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 118/721 (16%), Positives = 251/721 (34%), Gaps = 120/721 (16%) Query: 98 EPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLV 157 + Y+++ ++ E + + + + F+ AA++ L+ +YL Sbjct: 22 KKHEKYENIYNQLKNDVKTLQCFRKTVNIEQTKYPFLLTYINNYIFTGAAIQLLQERYLN 81 Query: 158 QNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRT 217 + E+ Q + +A+ N + + + Y +S I + + I T Sbjct: 82 KG-------ENIQEGFARIASYFCDN----SNVPLWRNIYKCLSATNILVSSVIARYQDT 130 Query: 218 PTRQFS----------------SCVLIECGDSL-DSINATSSAIVKYVSQRAGIGINAGR 260 + ++ +C+L + + + Y+++ GIG+ Sbjct: 131 YSSSYATVAGVTRDEDTTTKGKACLLAVMPEKYNEDALRLMWKLFDYLAKGIGIGLCIDN 190 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 + GS G E G F + R ++ ++ + +L ++ Sbjct: 191 VPKYGSD--GYEYIKGGIHEFLDLLSHVNGV--RITKRESNFAVYISIYRDTLYDVLNIR 246 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 N++ ++ V+I + ++ E LF ++ L +++EFE LY Sbjct: 247 QRN---KNKLLNVFPAVKIPNMFMKKVRNNEAWYLFDVTESQLLDKT--KNEKEFEELYE 301 Query: 381 KYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 + + ++ ++F +++ TG YI +D+ N + + ++ NLC Sbjct: 302 TFVS-EQKYTNMYESRKIFKDIIKNILMTGSPYIIFIDNVNKFNNIK-HLGKIKTLNLCS 359 Query: 441 EIALPTKPLNDVNDENGEIALCTLSAFNLGAI-------------------NNLD----- 476 EI I+ C L + N+ N Sbjct: 360 EITNYC--------NEDVISTCLLLSVNVANFKHQWDLVSSLENILSKEFNVNFKDDDFV 411 Query: 477 -ELEELAILA------VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGK 529 EL+E + L + L A + + G+ RR +G+ + + Sbjct: 412 IELDETSKLCWSYCKIMGFL-ATVCLNYF------LGSSKRREIGVSPLGVYDAIIISK- 463 Query: 530 RYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNETTYAKGILPIDTYKKDLD 588 E++ + AS +K+ G C F + +++G D Sbjct: 464 ---TDQPLFFCKLISESLYKGCVLASVAWSKKFGIRCKNFENSCFSRGEFQFDLRNLTYK 520 Query: 589 TIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGI-EP-------PRG 640 I+ DW +L+ + +G+ NS L+ P+ T+S +++ T + EP R Sbjct: 521 NIS------DWSSLKRDVLLYGMANSLLTCQAPTATTSLLADVTPSVTEPHDCCDFICRE 574 Query: 641 YVSIKASKDGILRQ--VVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTN 698 + S +++ + + E ++ + +L L + +IDQS S N Sbjct: 575 HSFRSLSLSYVMKNFFIKNNVEMINFSKKLF----QLKLSKNLYKVSLPYIDQSQSVILN 630 Query: 699 YDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDDGCESG 757 G +L++ L+ AY KT LYY N + D +++ C+S Sbjct: 631 --------GNFSSLELMEYLIYAYNNDFKTALYYINLKSTGTSMLYDDT-KKENEICDSC 681 Query: 758 A 758 + Sbjct: 682 S 682 >UniRef50_Q39UD5 Ribonucleotide reductase large subunit n=3 Tax=cellular organisms RepID=Q39UD5_GEOMG Length = 279 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 20/273 (7%) Query: 474 NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSD 533 + L E AVR LD +D YP+PA + G R +G+GV+ +A L + G Y+ Sbjct: 11 DFPSLAEDIKTAVRFLDDTIDANIYPLPAIELMHKGNRKIGLGVMGWADLLLRLGLPYNH 70 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILP--IDTYKKDLDTIA 591 + L + ++ KAS ELA+E+G P F + Y P + + Sbjct: 71 PQSFALARSLMKFVRDTSRKASAELAEERGVFPNFAGSVYDAPDRPRVRNATTTTIAPTG 130 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVS----IKAS 647 D + E + + + L ++I+ + RG S K Sbjct: 131 TLATIADCSSGIEPLFALAYKRNVLGT-----ELTEINGYFLNVAKERGLFSDELMQKVM 185 Query: 648 KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSG 707 + G LR + + ++ E+P D ++++ Q++ D ++S N Sbjct: 186 EQGNLRGITGIPADIRRLFKTALEIPAAD-HIEMQAAFQEYTDNAVSKTVNLP------A 238 Query: 708 KVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGA 738 + + K L AY+ GVK T++ ++ G Sbjct: 239 RATRGDVAKAFLLAYEKGVKGITVFRYGSKKGT 271 >UniRef50_A3QTY4 Ribonucleotide reductase large subunit n=2 Tax=Oryctes rhinoceros virus RepID=A3QTY4_9VIRU Length = 737 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 122/727 (16%), Positives = 237/727 (32%), Gaps = 111/727 (15%) Query: 96 QFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKY 155 Y G+ + + + +++D DRD +S ++ L+ +Y Sbjct: 57 DLSTIHKYRDSESDPVNGETFRKWFPNIGNADIDVL-SWLDTDRDFIYSSHGMRLLKNRY 115 Query: 156 LVQNRVTGEIYESAQFLYILVAACLF------------SNYPRETRLQYVKRFYDAVSTF 203 L+ E Q+ + +A N + Q + YD +S Sbjct: 116 LLP-------AEPIQYCMLRIAKLFSRRNSSNNSSSSDGNSIDDINFQLWRLMYDVLSCG 168 Query: 204 KISLPTPIMSGVRTPTRQFS---SCVLIECGDSLD-SINATSSAIVKYVSQRAGIGINAG 259 + I++ + +C L+ C D + + I +S G+G++A Sbjct: 169 -YMHTSSILADADNADKNIVPGEACRLLVCNPDYDRAFVNQINEICNLISLGVGVGMSAS 227 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 + G + G G F + + R ++ M + + L Sbjct: 228 TVPLHGYAVNG--KIRGGFKSFARKLDSCNYLSIY--ERKPKIAIYIEMHNNTIYEAFEL 283 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 +N N + ++ G+ + ED LF +E++R+Y Sbjct: 284 RNPLT---NHLENVFVGIMVPDYFIECYENDEDWYLFPGDAKLDGRTLCEFTGDEYKRMY 340 Query: 380 TKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLC 439 ++ + ++ +V + L ++ + TG Y+ D+ N S + ++ NLC Sbjct: 341 KRFV-EANLYTNKVSSSALMDDLVTCISETGSPYVVWSDNVNRFSNHK-HLGKIKTLNLC 398 Query: 440 LEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNL-DELEELA---------------- 482 EIA G+ + CTL + N D L+ + Sbjct: 399 AEIANYAS--------VGKSSSCTLMSVNFAMYREFPDVLDRVYAFVEEHSEFDAGYNGF 450 Query: 483 -ILAVRALDALLDYQDYPIPAAKR--------GAMGRRTLGIGVINFAYYLAKHGKRYSD 533 A A + Y + +R LG+ + G Sbjct: 451 HRAASEFQHATMSKYAYAMGFVATWALNMFMGVTRKQRELGVSPLGAYDMAIMDGV---- 506 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNETTYAKGILPIDTYKKDLDTIAN 592 + + EA+ + +S + A+ C ++ + +++GI + Sbjct: 507 -DPVKVIAELSEAMYKGCIYSSCKFARMYDVECAYYKGSPFSEGIPQWLLRDE------R 559 Query: 593 EPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI- 651 + + DW E ++T + NS L+A P+ T+S + + P V + S++G Sbjct: 560 KIITTDWTKTCELMRTK-MANSQLTAQAPTATTSMLVGEAESVTIPMSIVMARESENGRN 618 Query: 652 -LRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVP 710 L Y+ L + E L D L + FIDQS S S + Sbjct: 619 DLICYGLLYKLLMEPAEPLHLDNDIDRQLLMYARSAPFIDQSQST--------MFSIVLS 670 Query: 711 MQQLLKDLLTAYKFGVKT-LYY------------------QNTRDGAEDAQDDLVPSIQD 751 Q +L ++ Y +KT +YY R+ + D Q S + Sbjct: 671 RQNILNLIMDTYYLKLKTAIYYTLPKQINNTLTIVRQTPQPQKRESSTDCQFSPKRSRR- 729 Query: 752 DGCESGA 758 CE+ + Sbjct: 730 PSCEACS 736 >UniRef50_Q5SM68 Ribonucleoside-diphosphate reductase n=6 Tax=Thermus RepID=Q5SM68_THET8 Length = 2202 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 120/318 (37%), Gaps = 46/318 (14%) Query: 367 AFFADQEEFERLYTKYEKDDSI--RKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS 424 D + R Y + + I + R + E+ + +E+ S ++++ + Sbjct: 1198 KALPDGKGALREYPVAPQYELILGGENRDRFAEVVGFLQEEKQSKLLAFLRHRPRGSYRK 1257 Query: 425 PFDPAIAPVRQSN--LCLEIALPTKPL----NDVNDENGEIAL-----CTLSAFNLGAIN 473 PF +A V + ++ P V GEI L C L A NL A Sbjct: 1258 PFLATVASVEPAGEAPVYDLTEPVTHSLIANGLVAHNCGEIPLTVGEPCDLGAMNLAAYV 1317 Query: 474 N-----LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHG 528 ++E A+R LD +LD + +P + A R LG+G++ A L K G Sbjct: 1318 KDGEFQMEEFRRDVRTAIRFLDNVLDVNKFALPDNEMAAKKLRRLGLGLMGLADALIKMG 1377 Query: 529 KRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLD 588 Y A ++ A++ ++AS LA+E+G P + E +++ Sbjct: 1378 LPYDSEEARRKVYEIVSAMREEAIRASEALAEERGPFPLYEE------------HREYFQ 1425 Query: 589 TIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 ++ +P RN L + P+ T+S + ++GIEP + Sbjct: 1426 SLGIKP----------------RRNVALLTVAPTGTTSMLMGVSSGIEPVFSPFVWRRIG 1469 Query: 649 DGILRQVVPDYEHLHDAY 666 + P + L +AY Sbjct: 1470 GEYKPLLHPLFVELMEAY 1487 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 53/155 (34%), Gaps = 9/155 (5%) Query: 294 QGGVRGGAATLFYPMWHLEVESLLVLKN-NRGVEGNRVRHMDYGVQINKLMYTRLLKGED 352 R GA + H ++ L K+ +R + + V + K E Sbjct: 736 SHNTRRGAGMATLSIEHPDLLDFLTAKDLDREKAEGDISTFNISVLATDRFLEAVEKDEL 795 Query: 353 ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS-----IRKQRVKAVELFSLMMQERA 407 +P +VPG Y + + +L E++D + +V A L+ + Sbjct: 796 WP-VTPIEVPGKYYPYPVEGPYTGKLPPLPEREDGAKAIPLYGGKVPARWLWHEIAWHAW 854 Query: 408 STGRIYIQNVDHCNTHSPFD--PAIAPVRQSNLCL 440 +TG + VD N S +R +N C Sbjct: 855 ATGEPGLIFVDRVNALSALKGLGERYQIRSTNPCF 889 Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 54/184 (29%), Gaps = 39/184 (21%) Query: 139 RD-MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFY 197 RD F A +YL G+I ++ VA + E R ++ + F+ Sbjct: 4 RDGYFFDEHAQAIARRQYL--QPGDGDIL----GMFRRVAREIAKAEREEERSKWEEEFF 57 Query: 198 DAVSTFKISLPTPIMSGVRTPTRQFSSCVLI----ECGDSLDSINATSSAIVKYVSQRAG 253 ++ + S I++G T +C + +S I + + G Sbjct: 58 RLMAEKRFSPGGRILAGAGTVHGNLLNCFVQGATENPPESFAGIMEVAKKLALVTKVGGG 117 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 G+N R+ G + R + H +V Sbjct: 118 NGVNLDPYRSKG----------------------------KRARRAVEGVAYLSAEHPDV 149 Query: 314 ESLL 317 E + Sbjct: 150 EDFI 153 Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 1/75 (1%) Query: 230 CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFY-KHFQTA 288 D + I + + ++ +R G+PIRG +G + F + F Sbjct: 209 VPDDMGGIIDAAREAADLARKGQKPHVDFSLLRPEGAPIRGSGGTSSGPVSFLFEIFDNF 268 Query: 289 VKSCSQGGVRGGAAT 303 ++ + G G Sbjct: 269 LEWVAWGAEEAGPVA 283 >UniRef50_O55567 P25 n=1 Tax=Leucania separata nuclear polyhedrosis virus RepID=O55567_NPVLS Length = 222 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 76/189 (40%), Gaps = 5/189 (2%) Query: 224 SCVLIECG-DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFY 282 SC L+ DS+ I T + GIG+N +R S I+ +G +P Sbjct: 19 SCFLLTMESDSIRGIYNTLNDCAMISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPML 78 Query: 283 KHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKL 342 + F V+ + ++ +L ++ N G E + R + + + + Sbjct: 79 RVFNNMVRHVIKVASEKAPKQCTLNRGIGDIMDVLHMRRNIGSEDTKARDLMNALWVPDI 138 Query: 343 MYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLM 402 R+ + +L P++ P L D + ++FE Y YE R+Q + AV L + Sbjct: 139 FMKRVEENGIWSLMCPNECPKLNDTY---GDDFEYWYKHYEDKGQFREQ-MPAVTLMRNI 194 Query: 403 MQERASTGR 411 ++ +A T Sbjct: 195 IEIQAETAH 203 >UniRef50_C7LZ05 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ05_ACIFD Length = 1331 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 104/313 (33%), Gaps = 29/313 (9%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYIL-----VAACLFSNY--PRETRLQYVKR 195 +S A L KY + T E S + + VA Y + R + Sbjct: 54 WSQNATNILAQKYFRGHLGTPEREGSLRQVVDRIVNRIVAWGEADGYFADDDERDAFADE 113 Query: 196 FYDAVSTFKISLPTPIMSGVRTPT--RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAG 253 + + + +P+ + +Q S+C ++ D+++SI +G Sbjct: 114 LRWLLVHQRAAFNSPVWFNIGVEGVPQQASACFILSVDDTMESILNWYHEEGIIFKGGSG 173 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLE 312 G+N IR+ P+ GG +G + F + + + GG R A + + H + Sbjct: 174 AGVNLSTIRSSVEPLAGG-GTASGPVSFMRGADASAGTIKSGGKTRRAAKMVILNVDHPD 232 Query: 313 VESLLVLKNNRGVEGNRVR-----HMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDA 367 VE + K +E + R D GV I + ++ + D Sbjct: 233 VEEFVWTK---AIEERKARVLAEAGFDMGVDGKDAF--------SIQYQNANNSVRVTDE 281 Query: 368 FFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD 427 F E +R + + V+A +LF + + +Q N Sbjct: 282 FMQAVVE-DREWELRAVTTGEVTKTVRARDLFHQIAEAAWECADPGLQFDTTINRWHT-T 339 Query: 428 PAIAPVRQSNLCL 440 P + SN C Sbjct: 340 PNAGRINGSNPCF 352 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 112/340 (32%), Gaps = 57/340 (16%) Query: 460 ALCTLSAFNLGAI------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTL 513 + C L++ NL A +++ A + + A D L DYP P + R L Sbjct: 760 SSCNLASINLLAYLDEDGNFDVEGFRHTARVLITAQDILAGNADYPTPRIAETSRAYRQL 819 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWF---NE 570 G+G N L G Y + + S ELA+ G + E Sbjct: 820 GLGYANLGAMLMALGLPYDSDGGRAYAAAVTALMTGAAYERSAELAERLGPFAGYADDAE 879 Query: 571 TTYAKGILPIDTYKK--DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 + + D K E W+ G+RN+ S L P+ T + Sbjct: 880 SMLRVLGMHRDALAKVDGAPEAIVEAARASWDMAIARASEVGVRNAQASLLAPTGTIGFL 939 Query: 629 SNA-TNGIEPPRGYVSIKASKDGILRQVV-----------PDYEH--------------- 661 + T GIEP V K G ++V EH Sbjct: 940 MDCDTTGIEPDFSLVKYKTLVGGGTMKIVNQTVPRALRTLGYPEHEIDQITAYLAEHDSI 999 Query: 662 -----LHDAYELLWEMPGND------GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVP 710 L +E ++ + G+L ++G +Q F+ +IS N + Sbjct: 1000 VGAPGLKPEHEAVFACAVGEYPISPTGHLAMMGAVQPFLSGAISKTVNLPSTS------T 1053 Query: 711 MQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPS 748 ++ + + L A++ G+K LY ++ G + S Sbjct: 1054 VEDVEQTYLDAWRLGIKAVALYRDGSKVGQPLSTTHEEDS 1093 >UniRef50_Q9RRW1 Ribonucleoside-diphosphate reductase n=1 Tax=Deinococcus radiodurans RepID=Q9RRW1_DEIRA Length = 1418 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 68/386 (17%), Positives = 118/386 (30%), Gaps = 103/386 (26%) Query: 436 SNLCLEIALPTKPLNDVNDENGEIAL-----CTLSAFNLGAI-----NNLDELEELAILA 485 ++ +E + GEI L C L A NL A + Sbjct: 871 YDVTVEQVHAFDANGVLAHNCGEIPLTVGEPCDLGAINLAAYVRGSDFDFAAFRADVRTC 930 Query: 486 VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFE 545 VR LD +LD + + + + R LG+GV+ A L K G RY + S + Sbjct: 931 VRFLDDVLDVNVFALEDNRVASQDLRRLGLGVMGLADALIKMGLRYDNESGRQAIYDIMS 990 Query: 546 AIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRES 605 A++ + S L +E+G P + RE Sbjct: 991 ALREEAVAESERLGQERGFYPVYERN-------------------------------REQ 1019 Query: 606 IKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD---------------- 649 + RN + + P+ T+S + ++GIEP + Sbjct: 1020 VPHDPRRNVAVLTVAPTGTTSMLMGVSSGIEPVFSPFIWRKIGSEYRALLAPLFVELLES 1079 Query: 650 --------------------------GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVG 683 G + + + L + ++ D ++++ G Sbjct: 1080 YPAPKGMEKDGGWDWDKVTEAVSENHGSVVGLSFIPDALQQVFVCAHDISPVD-HVRMQG 1138 Query: 684 IMQKFID-------QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNT 734 +Q+ D S+S N S + + AY+ G K T+Y Sbjct: 1139 TVQRAFDDGGQLAANSLSKTINLPNS------ASVDDVKSAYEEAYRTGCKGITVY---- 1188 Query: 735 RDGAEDAQDDLVPSIQDDGCESGACK 760 RDG+ Q + E G+ + Sbjct: 1189 RDGSRQFQVLSTSKKKAKTEERGSAE 1214 Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 80/248 (32%), Gaps = 35/248 (14%) Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF-YKHF 285 + D + I + + + I+ +R G+PI+G +G + F + F Sbjct: 280 VTAVADDMGGIIDAARQVAEIAKLNIEPRIDLSAMRPEGAPIKGSGGTSSGPVSFLMEIF 339 Query: 286 QT------------------------AVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKN 321 ++ QGG R GA + H +V L K+ Sbjct: 340 DNFIEWANRGAEDSGPINTLRYVYAPVLRVVRQGGTRRGAGMATISIGHPDVLDFLTAKD 399 Query: 322 -NRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEE---FER 377 +R + + + ++ + L T DVPG Y + E F Sbjct: 400 LDREAAEGDISTFNISILVDTKFWDTLQADGVWT-IDAQDVPGKYFPVPQEGEYAGTFPE 458 Query: 378 LYTKYEKDDSIRKQR---VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP--AIAP 432 L T+ E + A L+ + Q STG + D N +S Sbjct: 459 LPTRAEDGAKGVPVYGSGIPARWLWDQIAQHAWSTGEPGLIFNDRVNEYSALKNLGERYE 518 Query: 433 VRQSNLCL 440 +R +N C+ Sbjct: 519 IRSTNPCV 526 Score = 96.2 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 53/180 (29%), Gaps = 36/180 (20%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVST 202 F A + +YL N G+I ++ +A + E R + +++YD ++ Sbjct: 80 FDENAQHIAKRQYLQGN--DGDIS----GMFWRIADWVAGAEAPEARQGWAQQYYDLMAE 133 Query: 203 FKISLPTPIMSGVRTPTRQFSSCVLIEC----GDSLDSINATSSAIVKYVSQRAGIGINA 258 K +++G T +C + S + + + + G G+N Sbjct: 134 KKFCPGGRVLAGAGTQHGNVLNCFVQGATEHDPSSFEGVMEVAKKLALVTKVGGGNGVNL 193 Query: 259 GRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLV 318 R R G ++ H +V+ + Sbjct: 194 DVYRPRAQSSRSDNGV------------------------RG--WVYMSAEHADVQDFIE 227 >UniRef50_Q91ES8 ORF127 RR1 n=2 Tax=Baculoviridae RepID=Q91ES8_GVCP Length = 624 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 111/603 (18%), Positives = 209/603 (34%), Gaps = 81/603 (13%) Query: 167 ESAQFLYILVAACLFSNYPRETR-LQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSC 225 ES ++ L +N+P ++ + ++ + + + Sbjct: 27 ESPDQFVHRMSRLLTNNHPTKSDAVAHLLSSVSLIPSSSLCH----HFNTGDGIPSACCL 82 Query: 226 VLIECGDSLDSINATSSAIVKYVSQRAGIGI------NAGRIRALGSPIRGGEAFHTGCI 279 + ++D+ + I + + G+GI N RA G +R + Sbjct: 83 FVFSKDHNVDAKFEELTRIARVAIKGTGVGIGADSLKNKSTTRAPGE-LRNTY------V 135 Query: 280 PFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQI 339 F K + VR ++ + + L L+ ++ ++ YG+ + Sbjct: 136 DFCKSLNHLINL--SVTVRQSRVAVYVSLHNTTAYESLFLRQTGNIQTE---NIFYGIMV 190 Query: 340 NKLMYTRLLKGEDITLFSPS---DVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAV 396 L + +G F D L D + EE+ERLY + + I+ + V Sbjct: 191 PDLFVRKQKEGGVWHFFDNDAQVDGKSLNDCY---GEEYERLYEEMVRRG-IQIKSVNVW 246 Query: 397 ELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDEN 456 EL+ ++ A+ G YI D N ++ A+ V+ NLC E+ + + Sbjct: 247 ELWGEIVNCLATNGYPYIVWRDTVNKYNN-QQALGVVKTLNLCAEVCQHATD----STVD 301 Query: 457 GEIALCTLSAFNLGAINN---------LDELEE--LAILAVRAL--DALLDYQDYP---- 499 +LCTL N+ A D+L + + + L + +LD+ Y Sbjct: 302 TNTSLCTLMTLNVAAFCEDYTQHWHLIYDDLRQCQIPEQCIPPLGENKILDHCFYGGYMS 361 Query: 500 --IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT-----HKTFEAIQYYLL 552 + G RR +G+ L Y + + E I + Sbjct: 362 TFVLNCVLGESKRREIGVSPTGLFDALHIM---YGAAATYEYAMDDYSARVAEYIYLGCV 418 Query: 553 KASNELAKEQG-ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGL 611 S + G C F + +++G+ D L W +R G+ Sbjct: 419 VGSVVYNRLYGVECVNFRASRFSEGVFQFDLRGVTPS------LTLQWACIRPHAMR-GM 471 Query: 612 RNSTLSALMPSETSSQISNATNGI-EPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLW 670 NS L+ P+ T+SQI+N T + P G ++ K S+ G + P Y H + Sbjct: 472 ANSMLTTQAPTATTSQITNVTESVQYPLPGRITTKNSETGRFADL-PFYAHFTNQPPSRH 530 Query: 671 EMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-L 729 +++ ++DQS S +P ++ K L+ +K +KT + Sbjct: 531 PHVSPLRQIKVYANTAPYVDQSQSTIIYCEPKN--------DEISKVLVYTHKAQLKTGV 582 Query: 730 YYQ 732 YY Sbjct: 583 YYL 585 >UniRef50_P16782 Ribonucleoside-diphosphate reductase large subunit-like protein UL45 n=18 Tax=Cytomegalovirus RepID=RIR1_HCMVA Length = 906 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 126/630 (20%), Positives = 212/630 (33%), Gaps = 109/630 (17%) Query: 167 ESAQFLYILVAACLFSNYPRET-----RLQYVKRFY-DAVST-------FKISLPTPIMS 213 ES +++ +A L + R RF + + + ++SL T MS Sbjct: 316 ESPGGVFLRIAVALTAAIENSRHSRIYRFHLDARFEGEVLESVLKRCRDGQLSLSTFTMS 375 Query: 214 GVRTPT-RQFSSCVLIECGD-SLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGG 271 V Q+ LI S D+ A + +S + +N R+ A Sbjct: 376 TVGFDRVPQYD--FLISADPFSRDASWAAMCKWMSTLSCGVSVSVNVTRLNAD------- 426 Query: 272 EAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWH---LEVESLLVLKNNRGVEGN 328 + + V +F MW + V + + LK + Sbjct: 427 ------VNSVIRCLGGYCDLIREKEVHRPVVRVFVDMWDVAAIRVINFI-LKESTSELTG 479 Query: 329 RVRHMDYGVQINKLMYTRLLKGED-ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS 387 + + ++ R E +LF L D + FE+ Y++ E+ S Sbjct: 480 VCYAFN----VPSVLMKRYRAREQRYSLFGRPVSRRLSD--LGQESAFEKEYSRCEQ--S 531 Query: 388 IRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTK 447 K V + M+ GR + V H +S ++ CL + + Sbjct: 532 CPKVVVNTDDFLKKMLLCALK-GRASVVFVHHVVKYSIMADSVCLP----PCLSPDMASC 586 Query: 448 PLNDVNDE----NGEIALCT----------LSAFNLGA---INNLDELEELAILAVR--- 487 + + +A C L LG +L L EL AV Sbjct: 587 HFGECDMPVQRLTVNVARCVFARSDEQKLHLPDVVLGNTRRYFDLSVLRELVTEAVVWGN 646 Query: 488 -ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA 546 LDAL+ ++ + +A R L IGV L + G Y ++ +L + FE Sbjct: 647 ARLDALMSASEWWVESALE---KLRPLHIGVAGLHTALMRLGFTYF--ASWDLIERIFEH 701 Query: 547 IQYYLLKASNELAKE-QGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRES 605 + + ++AS +L K C WF T Y +G + Y+ +IA+ WEALR Sbjct: 702 MYFAAVRASVDLCKSGLPRCEWFERTIYQEGKFIFELYRLPRLSIAS----ARWEALRAD 757 Query: 606 IKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI-------------- 651 + GLRN A+ P + + + T + RG V + + + Sbjct: 758 MLEFGLRNCQFLAVGPDDEVAHLWGVTPSVWASRGTVFEEETVWSLCPPNRECYFPTVVR 817 Query: 652 --LRQVVPDYEHLHDAYE-------LLWEMPGNDGYLQLVGI-MQKFIDQSISANTNYDP 701 LR V +Y L E L P +++ + + F+DQ ++ YD Sbjct: 818 RPLRVPVVNYAWLEQHQEEGKATQCLFQAAPAIQNDVEMAAVNLSVFVDQCVALVFYYDS 877 Query: 702 SRFPSGKVPMQQLLKDLLTAYKFGVKTLYY 731 P LL +L Y + K Y Sbjct: 878 GMTPD------VLLARMLKWYHWRFKVGVY 901 >UniRef50_C1TR30 Ribonucleoside-diphosphate reductase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TR30_9BACT Length = 994 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 116/342 (33%), Gaps = 75/342 (21%) Query: 144 SYAAVKQLEGKYLVQ--NRVTGEIYE--SAQFLYILVAACLFSNYP---RETRLQYV--- 193 S A L+ +YL+ +R G++ + S + V+ + S E L ++ Sbjct: 30 SENAAWLLDQRYLLSRYDRAEGKVRKEASFEEFARRVSRVIASVETLYVGEDDLNWIRVL 89 Query: 194 -KRFYDAVSTFKISLPTPIMSGVR--------------------------------TPTR 220 K + + + +P + G T ++ Sbjct: 90 EKNLFSDILNRRFLFNSPCLFGAGAGMTVDPAMSELIYRSPDDMSYSDYVAVRDGKTESQ 149 Query: 221 QFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIR-GGEAFHTGCI 279 Q +C +I DS++ I + G+G N G +R GS I+ G +G + Sbjct: 150 QLFACFVISVEDSIEGIFDSVKDAAVISKYGGGVGGNFGNLREFGSDIKGGTGGKASGPV 209 Query: 280 PFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQI 339 F + + T QGG R A H +VE + K VE ++ + + V + Sbjct: 210 SFMETWNTMGSVVVQGGRRRAALMGMLYDDHPDVERFMDAK----VEDGKLPYFNISVSV 265 Query: 340 NKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELF 399 + + T+ +G D L S + D + VKA +L+ Sbjct: 266 SDELLTKAAQGGDFHLRS--------------------------RADGSVAKTVKAADLW 299 Query: 400 SLMMQERASTGRIYIQNVDHCNTHSPFDPA-IAPVRQSNLCL 440 + + + G + D N + A + +N C+ Sbjct: 300 NKLCRNAWRRGDPGVFFGDRANVDNILKKAPQWRIESTNPCV 341 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 63/387 (16%), Positives = 115/387 (29%), Gaps = 95/387 (24%) Query: 424 SPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------N 473 + FD V C E LP C L + NL A Sbjct: 463 NAFDANGLYVHN---CGEQPLPN------------YTSCNLGSVNLEAFVSSESSGEAVF 507 Query: 474 NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSD 533 ++D + +V LD ++D YP+ R +G+G++ A G Y Sbjct: 508 DMDSFVDQVFRSVYYLDLVIDATSYPLERIADRTKMIRPVGLGLMGLADAAIMLGISYGS 567 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANE 593 S N + L A+ + E+G P+ ++ + D + Sbjct: 568 ESFNRFCRSLGGTMASAALAATVRIVSEEGKDPFPEHRLVSELMESFRCEAGLPDAVDRW 627 Query: 594 PLHYD---WEALRESIKT----------------------HG-----------------L 611 D + L E ++ G + Sbjct: 628 LERMDEGGFRELLERMRRTDTVPYTLVNTLEALLSAASVHKGDGMGLVREVLEALFSGRM 687 Query: 612 RNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDA------ 665 RNS ++ P+ + S + +A+ GIEP + + E+ H Sbjct: 688 RNSRRLSVAPTGSISMLLDASPGIEPNFAWSWSRKVMSSTGDGGYETREYFHRLMTAEHK 747 Query: 666 -------------YELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQ 712 + +++ G D ++++ GI +D IS N + + Sbjct: 748 DEFRRTGGISDPRFVTAYDI-GTDSHVEVTGIFAAVVDSGISKTVNLP------SEATVD 800 Query: 713 QLLKDLLTAYKFGVK--TLYYQNTRDG 737 + + Y+ G K T+Y +R Sbjct: 801 DVRRVYEDCYRMGCKGITIYRDGSRSD 827 >UniRef50_P52343 Ribonucleoside-diphosphate reductase large subunit-like protein U28 n=5 Tax=Human herpesvirus 6 RepID=RIR1_HHV6U Length = 804 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 101/522 (19%), Positives = 180/522 (34%), Gaps = 72/522 (13%) Query: 242 SAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGA 301 + + + I +N R + I ++ + ++ + + Sbjct: 252 EHLFPALLNGSNISMNLTRYQQEAKNI-------------FEILLSQIRVVERDTDKTVQ 298 Query: 302 ATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLL-KGEDITLFSPSD 360 T++ +WH+ L L + +RV + + I + R K +LF + Sbjct: 299 LTVYVEVWHVSALMWLDL-YEALPQTSRVT---FCLIIPGIFMDRYELKRAQWSLFHKNI 354 Query: 361 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC 420 L D+ F Y ++E+ K + + + GR+ + + Sbjct: 355 AFELGKC---DEITFSTKYLEFERTTDHAKITMSS--FIEKICLCL-KGGRMGLIFRKNV 408 Query: 421 NTHS--PFDP--------AIAPVRQS-NLCLEIALPTKPL--NDVNDENGEIALCTLSAF 467 +S P P + PVR N C+ + L ++V+DE E Sbjct: 409 YQYSMIPHVPLYCGGDFLDVLPVRDGINTCMRMLLNVVHFLGDEVSDELTEEIDFVRLQC 468 Query: 468 NLGAINNLDELEELAILAVRALDALLDYQ----DYPIPAAKRGAMGRRTLGIGVINFAYY 523 +EL + V +A++DY D+ + G R+LGI V Sbjct: 469 ---KFFMFNELRRVVRKMVLVANAVIDYAVENKDFLCEGIEDG----RSLGICVTGLHSV 521 Query: 524 LAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP--WFNETTYAKGILPID 581 G Y+ A L E I Y ++ S + +GA P F+ + YA G+L D Sbjct: 522 FMTVGLSYAHPDARRLYRMICEHIYYTCVRTSVDCCM-KGAEPCNLFDRSKYALGMLYFD 580 Query: 582 TYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPP--- 638 + T+ E W LR+ + HG+RN +A + I N++ P Sbjct: 581 HFDNVECTLPEEL----WTTLRKDVLMHGVRNIHFTAGTAMQKEFDIINSSESFWPMEDN 636 Query: 639 ----RGYVSIKASKDGILRQVVPDYEHLHDAYELLW------EMPGNDGYLQLVGIMQKF 688 R + + KDG+ L Y ++ + YL+ VG Sbjct: 637 KILRRSNIKVVIGKDGLNDVTSVYSSELKSLYIPVYNNLLLNRFNKHQQYLKTVGYRVLN 696 Query: 689 IDQSISANTNYDP-SRFPSGKVPMQQLLKDLLTAYKFGVKTL 729 +D ++ + D + F G L DL+ YK G+ L Sbjct: 697 VDTNLFTDKELDDLAVFKDG---FSYHLNDLIEMYKSGLPFL 735 >UniRef50_Q2S696 Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S696_SALRD Length = 932 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 77/357 (21%), Positives = 127/357 (35%), Gaps = 95/357 (26%) Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDAL----LD 494 C EIALP+ P E +C LS+ N ++ + + + LDA+ +D Sbjct: 632 CSEIALPSGP--------DESFVCCLSSMNALHYDDWKD-TDAVETLTQFLDAVMQEFID 682 Query: 495 --YQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLL 552 + A R A R +GIG++ + YL + + A+ + + I+ Sbjct: 683 GAKGMAHMDRAVRFAERHRAIGIGILGWHSYLQSNRIPFESAEASLTGAEIAKTIKERSY 742 Query: 553 KASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLR 612 AS ELA G P +G R Sbjct: 743 AASAELADRFGEPPVLEG--------------------------------------YGRR 764 Query: 613 NSTLSALMPSETSSQISN-ATNGIEPPRGYVSIK-------------------------- 645 N+T A+ P+++SS I + IEP + ++ Sbjct: 765 NATTMAVAPTKSSSFILGQVSPSIEPIKSNYFVQDRAKMKVTYKNPHLQALLQEKGRDTD 824 Query: 646 ------ASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNY 699 A +DG ++ + + D ++ E+ + QK IDQS S N Sbjct: 825 AVWDEIALRDGSVQHLDFLSDEEKDVFKTFSEI-SQMAIIDQAAGRQKHIDQSQSLNLAI 883 Query: 700 DPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCES 756 DP G P++ + + + A+K GVK+LYYQ+ G AQ + CE+ Sbjct: 884 DP-----GSTPVKDINRLYVEAWKKGVKSLYYQH---GVNAAQSFSRDLLACKACEA 932 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 93/291 (31%), Gaps = 58/291 (19%) Query: 151 LEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTP 210 L YL++ + +A + + RFY+ ++ SL +P Sbjct: 26 LRRGYLLEGTG-------PEDRVREIAEHAEGLLEMDG---FADRFYEYMARGYYSLASP 75 Query: 211 IMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRG 270 + + SC DS+++I T + + G G +R G+ I Sbjct: 76 VWANFGLDRGLPISCFGSYIDDSMEAILNTHAEVGMMTKVGGGTSGYFGDVRPRGASITN 135 Query: 271 GEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRV 330 G PF + F + SQG R G + + H +VE L ++ EG+ + Sbjct: 136 -NGTSNGTYPFAQLFDKIINVVSQGETRRGHFAGYIDIEHPDVEEWLNIQT----EGDAI 190 Query: 331 RHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK 390 + M YGV + ++ G+ Sbjct: 191 QTMMYGVVVGDDWMEAMIDGDS-------------------------------------- 212 Query: 391 QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP--FDPAIAPVRQSNLC 439 L++ +++ R + G YI + P + V SNLC Sbjct: 213 ---DKRALWAKVVESRMNLGIPYILFRGNVQDGRPQVYKDKGYDVHASNLC 260 >UniRef50_D0MFS7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFS7_RHOM4 Length = 1354 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 63/337 (18%), Positives = 114/337 (33%), Gaps = 68/337 (20%) Query: 460 ALCTLSAFNLGAI------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTL 513 + C L++ NL +++ + + A++ L+D YP + + R L Sbjct: 761 SACNLASLNLRKFQREDGSFDVERFRAAVRIFITAMEILVDNAGYPSEKIAQNSHDYRPL 820 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELA--KEQGACPWFNET 571 G+G N L G Y + + S E+A + G P F + Sbjct: 821 GLGFANLGAMLMAMGLPYDSDEGRAVAGAITAIMHAEAYARSAEIAAIEHIGPFPGFEKN 880 Query: 572 TYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK-------THGLRNSTLSALMPSET 624 + D + P + EA RES+ +G RN+ + L P+ T Sbjct: 881 REPMLEVMRMHQAAVEDIHLSCPAYLK-EAARESMARMVALGERYGYRNAQATVLAPTGT 939 Query: 625 SSQISNA-TNGIEPPRGYVSIKA---SKDGILRQVVPD--------------------YE 660 S + + T GIEP V K DG+ + V Y Sbjct: 940 ISFMMDCDTTGIEPDIALVKYKLLAGKGDGMFKIVNNTVPIALRRLGYSEEQIKDILAYI 999 Query: 661 HLHDAYELLWEMPGND--------------------GYLQLVGIMQKFIDQSISANTNYD 700 +D E + G+++++ Q FI +IS N Sbjct: 1000 EENDTIEGAPHLKEEHLPVFDCAFKPYKGQRFIHYMGHIKMMAACQPFISGAISKTVNMP 1059 Query: 701 PSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTR 735 V +++++ + +K G+K +Y +N++ Sbjct: 1060 ------EHVTVEEIMDAYIQGWKLGLKALAIYRENSK 1090 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 100/343 (29%), Gaps = 54/343 (15%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESA-------QFLYILVAACLFSNYPRE---TRLQY 192 +S A + KY + G + L V + + + Sbjct: 65 WSQLATNVVASKYFYGDLAAGNGDPREGKREYSLKQLIHRVTRTIADWGKAQGYFATPED 124 Query: 193 VKRFYDAVS----TFKISLPTPIMSGVRT------------------------------P 218 +RFYD ++ + +P+ V Sbjct: 125 AERFYDELTWLCLHQYGAFNSPVWFNVGLYHQYGVRDTGSKTIYGWDFEKQRVVPVDPYE 184 Query: 219 TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 Q S+C +I DS+D I + + +G+G + ++R+ + GG +G Sbjct: 185 RPQASACFIISVEDSIDDIWQLMAESARLFKFGSGVGADWSKLRSTKEKLSGG-GRPSGP 243 Query: 279 IPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGV 337 + F + + GG R A +WH ++ + K + + Y Sbjct: 244 VSFMRVQDATGATIKSGGKTRRAAIMQTLKVWHPDIMEFVTAKAKEEKKAWALIEQGYDG 303 Query: 338 QINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVE 397 N Y+ + + + + D F + K + + + A E Sbjct: 304 SFNGEAYSSV------AFQNVNQSVRVTDEFMEAVLARRKFPLKAVTTGKVIE-EIDAYE 356 Query: 398 LFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 L + + G +Q D P+ SN C+ Sbjct: 357 LLYKVAEGTWICGDPGLQYEDTIQRWHTCK-NSGPINSSNPCV 398 >UniRef50_B3UXH6 Ribonucleotide reductase n=7 Tax=Murid herpesvirus 1 RepID=B3UXH6_MUHV1 Length = 1180 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 89/511 (17%), Positives = 173/511 (33%), Gaps = 51/511 (9%) Query: 167 ESAQFLYILVAACLF-------------SNYPRETRLQYVKRFYDAVSTFKISLPTPIMS 213 E+ +++ VAA L + Q F A+ +F I +++ Sbjct: 540 ETPISVFVRVAAALAVECEVDGGASYKILSSKPVDAAQAFDAFLSALCSFAIIPSPRVLA 599 Query: 214 GVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRA---GIGINAGRIRALGSPIRG 270 R I S ++ S + G + + G + Sbjct: 600 YARFGGSNP--------------IFDAVSYRAQFYSAESTINGTLHDICDMVTNGLSVSV 645 Query: 271 GEAFHTG-CIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNR 329 A G + K+ +++ +W ++ + + G E Sbjct: 646 SAADLGGDIVASLHILGQQCKALRPYARFKTVLRIYFDIWSVDALKIFSFILDVGREYEG 705 Query: 330 VRHMDYGVQINKLMYTRLLK---GEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDD 386 + + + V ++ + R L + +F+ + L D + F +Y K E+D Sbjct: 706 L--ISFAVNTPRIFWDRYLDSSGDKMWLMFARREAAALCGL---DLKSFRNVYEKMERDG 760 Query: 387 SIRKQRVKAVELFSLM--MQERASTGRIYIQNV-----DHCNTHSPFDPAIAPVRQSNL- 438 V + R +T ++ NV ++ + P ++ V + Sbjct: 761 R-SAITVSPWWAVCQLDACVARGNTAVVFPHNVKSMIPENIGRPAVCGPGVSVVSGGFVG 819 Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQ-D 497 C I L + E + LG + LE L AV + L+D Sbjct: 820 CTPIHELCINLENCVLEGAAVESSVDVVLGLGCRFSFKALESLVRDAVVLGNLLIDMTVR 879 Query: 498 YPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNE 557 A + R L IGV+ F + + G++++D + +L + E I Y ++AS + Sbjct: 880 TNAYGAGKLLTLYRDLHIGVVGFHAVVNRLGQKFADMESYDLNQRIAEFIYYTAVRASVD 939 Query: 558 LAKEQG-ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTL 616 L P F ++ YA G D + D E LRE + HG+RN++ Sbjct: 940 LCMAGADPFPKFPKSLYAAGRFYPDLFDDDERG-PRRMTKEFLEKLREDVVKHGIRNASF 998 Query: 617 SALMPSETSSQISNATNGIEPPRGYVSIKAS 647 ++ ++ ++ T G P R V ++ + Sbjct: 999 ITGCSADEAANLAGTTPGFWPRRDNVFLEQT 1029 >UniRef50_Q6QXF6 ORF37 n=3 Tax=Baculoviridae RepID=Q6QXF6_GVAS Length = 615 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 107/667 (16%), Positives = 213/667 (31%), Gaps = 107/667 (16%) Query: 139 RDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYD 198 R ++ + L+ + E+ + ++ + E ++ + Sbjct: 8 RLNNLQEFGRIIMKERMLLDD------VETPEEFCQRISRGMVKLDDEEKKIAHAT---A 58 Query: 199 AVSTFKISLPTPI--MSGVRTPTRQFSSCVLIECGDSLDSINAT--SSAIVKYVSQRAGI 254 +S+ I + + ++ S+C L S ++ + I K G+ Sbjct: 59 LLSSVSIIPSSALCQHLNLQRNDTTPSACHLTVFSHSYEAFSKLNELDRIAKMAIMGTGV 118 Query: 255 GINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVE 314 G+ +R GS + G + ++ A R +F + H+ Sbjct: 119 GVGGDYLRYKGSNVAGELKNS--FVEICQYLNAATTLN--VSARKSRVAVFLSLHHICSM 174 Query: 315 SLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGED--ITLFSPSDVPGLYDAFFADQ 372 L L+ ++ YGV I K ++ F + Sbjct: 175 ICLTLRQQNA---RVTSNIFYGVMIPNFFMEMQRKDKNAMWYFFDGNTTLEGLSLNDCYG 231 Query: 373 EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP 432 EE+E LY + + + +++ A ++ ++ G Y+ DH N + + Sbjct: 232 EEYESLYWRMV-EKKLYVKKMYATQVLGELISCLTENGFPYVVWRDHVNMFNNHRD-LGT 289 Query: 433 VRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-NNL---DELEELAILAVRA 488 ++ NLC EI + + ++CTL N+ A + EE+ Sbjct: 290 IQTLNLCTEICQ--------HAGSDSSSMCTLMTVNIAAYCEDYPLCKMYEEIVE----- 336 Query: 489 LDALLDYQDYPI----PAAKRGAMG-----------------RRTLG-------IGV--I 518 + +Y + P R LG +GV Sbjct: 337 -----ELAEYGLHQCCPQFDETNEARLLMHCFTASYTSTFLLNRLLGDKTSRRELGVTPT 391 Query: 519 NFAYYLAKH---GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA-CPWFNETTYA 574 + Y+ + + + E + + +S ++ C F+++ +A Sbjct: 392 GLFDAVYILCGRDAAYN-DAMIHYSALVAEYMYIGCVLSSIVYNRKFNVICVNFSKSEFA 450 Query: 575 KGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNG 634 KG+ D L W +R +K G+ NS L+A P+ T+S ++N T Sbjct: 451 KGLFQFDLRNVTPS------LSLLWNRIRPFMKK-GMANSMLTAQAPTATTSLLTNVTES 503 Query: 635 IE-PPRGYV-SIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQS 692 ++ P G V + K S G + ++ +Q+ M ++DQS Sbjct: 504 VQFPMSGAVQTTKNSGTGRFANIPFFLYKSNETDIGFNRPVTIAKQVQVFAKMAPYVDQS 563 Query: 693 ISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQD 751 S N + + + L Y +KT LYY + P I Sbjct: 564 QSVIINC--------SSTYEDVFRILRYTYDNKLKTALYY--------TVFNSNTPYIDL 607 Query: 752 DGCESGA 758 GC++ Sbjct: 608 SGCDACT 614 >UniRef50_P50641 Ribonucleoside-diphosphate reductase large subunit-like protein U28 n=2 Tax=Human herpesvirus 7 RepID=RIR1_HHV7J Length = 806 Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 114/659 (17%), Positives = 218/659 (33%), Gaps = 79/659 (11%) Query: 44 RSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALY 103 + + G+ + + II A + DAP L + + + +F+ +L Sbjct: 50 KILRRLNSGLDMWCLRDAIISALGAM--HDAPHVDRLLGQFYLKT---NSASEFDSISLI 104 Query: 104 DHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFS--YAAVKQLEGKYLVQNRV 161 +++ + ++ E +++ H FS A + + + N Sbjct: 105 LESENILQKELIE---FVRDSKVELEKILQAAIHVWRAKFSPGVLAASRFLDE--ISNSF 159 Query: 162 TGEIYESAQFLYILVAACLFSNYPRETRLQ---------YVKRFYDAVSTFKISLPTPIM 212 G I E+ +++ ++ L S + LQ V+ + LP P M Sbjct: 160 NG-IEENIPTIFLRISVTLASQIKKIEYLQKSFVSHKCPLVEEILILLYKRVCMLPFPCM 218 Query: 213 SGVRT---PTRQFSSCVLIECGDSLDSINATSSAIV-KYVSQRAGIGINAGRIRALGSPI 268 S + F + SL+ +S + + + +N R Sbjct: 219 SNLGLVSEKKSVFDTVFHNVSNFSLEDFLDINSGFFLPAMLNGSYVSVNLTRYHYEAE-- 276 Query: 269 RGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL--KNNRGVE 326 + + ++ + + T++ +WHL + L V+ Sbjct: 277 -----------SLMELLLSQLQIVEKDTNKTTGLTIYLEIWHLSLLMWLDFCEILPTTVQ 325 Query: 327 GNRVRHMDYGVQINKLMYTRLL-KGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKD 385 + + ++ RL + ++F + L D+ +F Y + E+ Sbjct: 326 VKFC------LILPEIFMERLKTENSYWSVFHKALAINL---GLYDESDFTSKYLECER- 375 Query: 386 DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPV------------ 433 + R+K L + + G++ + + +S P IA Sbjct: 376 -TAEHARIKTETLLDNICRCLRR-GQMGFIFRKNIHKYSML-PQIASYCLGNSMDVIPFE 432 Query: 434 RQSNLCLEIALP-TKPLNDVNDENGEIALCTLSAFNL-GAINNLDELEELAILAVRALDA 491 N IAL + + +V++E + F+ I NL ++ + V +A Sbjct: 433 YGLNTAFRIALNLSYFVENVSEEQKSHT--NIDMFHYRDKIFNLKKMRKTVTELVLIGNA 490 Query: 492 LLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYL 551 ++DY G + R+L I V L ++ L E I Y Sbjct: 491 VIDYALENRDFLMDGIVNARSLAICVTGLHSALMSMNLPFNSQLGCQLYRIVCENIYYSS 550 Query: 552 LKASNELAKEQGACP--WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH 609 ++ S K +GA P +F + YA+GIL D Y T+ N W LR IK + Sbjct: 551 VRTSMNCCK-KGAEPCSFFQRSKYAQGILHCDLYDNVEYTLPNVL----WTNLRSDIKKY 605 Query: 610 GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYEL 668 GLRN T + + N + P G +K S +L P + Y Sbjct: 606 GLRNLTFVSGSAMSKEFDLLNCSQSFCPIEGNKILKRSSIKVL-HPNPVFHSDLSVYST 663 >UniRef50_B7TPW4 GP45 n=1 Tax=Caviid herpesvirus 2 RepID=B7TPW4_9BETA Length = 929 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 96/605 (15%), Positives = 179/605 (29%), Gaps = 108/605 (17%) Query: 196 FYDAVSTFKISLPTPIMSGVRTPT----RQFSS-CVLIECGDSLDSINATSSAIVKYVSQ 250 F + + ++ LP + G+ FS C LD ++ ++ + Sbjct: 345 FLERLCLRRLCLPNYSLFGLGLRDQFFVGGFSCRCAEQTVSSYLD---KNVQEMLLFMRK 401 Query: 251 RAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMW- 309 + IN R G P+ + ++ +++ W Sbjct: 402 GTAVSINVT--RGAGDPLLKIAHMAS-----------QLQIIRTTQRVRSRLRIYFDSWS 448 Query: 310 -HLE-VESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGED--ITLFSPSDVPGLY 365 H + + ++ + +G+ + ++ + L++ Sbjct: 449 WHATGILDYI-----LSLDEEVFSGLSFGINVVSALFDAISPNGSGTWALWNFDWCSSFS 503 Query: 366 DAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP 425 RL D+ R V A + Q TGR+ + ++ + HS Sbjct: 504 KENMDQFVS--RLKRARPAADNERCIVVSARWFCEKIAQCVL-TGRLAVVYPENVHNHSV 560 Query: 426 FDPAIAPVRQS-------NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN----- 473 + P++ N LP ++ +E + N Sbjct: 561 LNDLYQPIQCLGPGVNFENPFSRETLPVVSVSVNLEECVADVVPDCMHDNEMMYIYASSD 620 Query: 474 ---NLDELEELAILAVR----ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAK 526 + L L AV LD+++ L + V F L K Sbjct: 621 WAIDSAHLRMLVEHAVVCGNAMLDSMIKNCGGESSKLAERFRRFAALAVNVTGFHKALMK 680 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE-QGACPWFNETTYAKGILPIDTYKK 585 Y A L K E + Y LK S L + AC WF T YA+GI+ D Y Sbjct: 681 LDVEYDSNEAVELCRKIHEHVYYEALKTSMSLCRAGASACTWFGRTMYARGIMMFDRYSV 740 Query: 586 DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALM-PSETSSQISNATNGIEPPRGYVSI 644 ++ + W LR++I HGLRN+ +++ P + ++ + I P I Sbjct: 741 TPTSVPTKH----WIVLRQNIMRHGLRNAFITSCQDPEDGVCLMTEGSVSILPILKNHYI 796 Query: 645 K--------------------------------ASKDGILRQVVPDYEHLHD-------- 664 + ++R+ + D Sbjct: 797 SHALIPRVEGFREEGFCHIDRRAGEDVPFVGIPVVNNLLIREEPRVQMAVSDRKWGVSDR 856 Query: 665 --AYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAY 722 + +++ G D L + F+DQ PS + +L+ L AY Sbjct: 857 TCIFRDAFDI-GMDRVLAMCAAASPFVDQ------VVAPSFCVQDGDGVGAILEALKRAY 909 Query: 723 KFGVK 727 +K Sbjct: 910 DLRLK 914 >UniRef50_Q65357 Putative uncharacterized protein n=1 Tax=Mamestra brassicae MNPV RepID=Q65357_NPVMB Length = 216 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 90/221 (40%), Gaps = 16/221 (7%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHETI 62 + V KRDG E+++ K+++ + L++ V V L+ D T DI Sbjct: 1 MYVVKRDGRLEQVSSSKLYQRIHRLCHDLNSQFVHPRAVSLKVIKGLSDNTTTEDIDIYA 60 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLED 122 AA L + DY LA RL + ++ K F H +V + Sbjct: 61 ASVAATL-TYKHYDYDTLAGRLLVTNMHKYVDESFTKVVQELHKHNLVSDELLSVTI--- 116 Query: 123 YTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS 182 + K ++ ID D+ ++Y + L+ YL++ + ++ E+ Q +++ +A +F Sbjct: 117 ---KHSKIIEENIDMKLDLDYNYFGYQTLKNGYLIK--INEKVAETIQHMHMRIALGIFG 171 Query: 183 NYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFS 223 + + + Y +S + +P M T T Q S Sbjct: 172 D-----DIDSAIKSYKFLSRKMYTHASPTMFAAGTLTPQTS 207 >UniRef50_Q9XD73 Vitamin B12-dependent ribonucleotide reductase (Fragment) n=15 Tax=Actinomycetales RepID=NRDJ_STRCT Length = 599 Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 112/363 (30%), Gaps = 72/363 (19%) Query: 460 ALCTLSAFNLGAIN------------------NLDELEELAILAVRALDALLDYQDYPIP 501 + C L++ NL + + ++ L + A+D + + D+P Sbjct: 6 SSCNLASLNLMKFLRDDTASDGASGAGGNMSLDAERFAKVVELVITAMDISICFADFPTE 65 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 R LGIG N L G Y L + + S ELA Sbjct: 66 KIGETTRAFRQLGIGYANLGALLMATGHAYDSDGGRALAGAITSLMTGTSYRRSAELAAV 125 Query: 562 QGACPWFNETTYAKGILPIDTYK--------KDLDTIANEPLHYDWEALRESIKTHGLRN 613 G + A + DLDT W+ + + + RN Sbjct: 126 VGPYEGYARNADAHKRVMRQHADANTAAQRMDDLDTPVWAAATEAWQDVLRLGEQNRFRN 185 Query: 614 STLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPD-------------- 658 + S L P+ T + + T G+EP V K G Q+V + Sbjct: 186 AQASVLAPTGTIGLMMDCDTTGVEPDLALVKFKKLVGGGSMQIVNNTVPKALKRLGYQPE 245 Query: 659 -----YEHL-------------HDAYELLW-----EMPGNDGYLQLVGIMQKFIDQSISA 695 H+ + YE+ G+++++ Q F+ +IS Sbjct: 246 QVEAVVAHIAEHGNVIDAPGLKPEHYEVFDCAMGERAISPMGHVRMMAAAQPFLSGAISK 305 Query: 696 NTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCE 755 N S ++++ + +K G+K L RD + Q ++ E Sbjct: 306 TVNMPES------ATVEEIEEIYYEGWKLGLKALAIY--RDNCKVGQPLSAKKKEEAKTE 357 Query: 756 SGA 758 + A Sbjct: 358 APA 360 >UniRef50_B3QY00 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Bacteria RepID=B3QY00_CHLT3 Length = 1966 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 94/371 (25%), Gaps = 102/371 (27%) Query: 184 YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP------------------------- 218 E Y + + +P Sbjct: 112 DSPEDAQAYYDETAYMLLKQMAAPNSPQWFNTGLAAAYGISGRSQGHFFVDPDTGKLTQS 171 Query: 219 -----TRQFSSCVLIECGDSL---DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRG 270 Q +C + D L I + +G G N IRA G + G Sbjct: 172 EDSYTRPQAHACFIQSVQDDLVNEGGIFDLVVREARVFKFGSGTGTNFSNIRAEGEMLSG 231 Query: 271 GEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNR 329 G +G + F K F A + GG R A + + H ++E + K E + Sbjct: 232 G-GTSSGLMSFLKIFDAAAGAIKSGGTTRRAAKMVIVNIDHPDIEEFIEWK---AKEEEK 287 Query: 330 VRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFA------------------- 370 V M G +IN +L P L D Sbjct: 288 VAAMVAGSKINSTFLKAILHEALENGADRKTNPALNDLIQRALYRGVPMNYILRTLSLVS 347 Query: 371 ------DQEEFERLYT----------------------------------KYEKDDSIRK 390 D E ++ Y ++ D S+ Sbjct: 348 QGFTSLDFESYDTHYESEAYSTVSGQNSNNTIRLTNEFMQAVENDEMWELRWRTDGSV-C 406 Query: 391 QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLC--LEIALPT-K 447 + V+A EL++ + +Q N P + SN C E + T + Sbjct: 407 RTVRAAELWNKIAFSAWKCADPGLQFDTTINEWHTC-PNDGRINASNPCVTAETLVATDR 465 Query: 448 PLNDVNDENGE 458 L + D GE Sbjct: 466 GLERIGDLVGE 476 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 68/195 (34%), Gaps = 29/195 (14%) Query: 458 EIALCTLSAFNLGAIN-------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGR 510 + C L++ NL + D L A + L+ + YP P + + Sbjct: 831 DDTACNLASLNLIHFVNEKTGDVDTDALRHAARVWTLTLEISVLMAQYPSPKIAQQSYDY 890 Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNE 570 RTLG+G N L G Y A + + S E+A + GA P F Sbjct: 891 RTLGLGFANLGSLLMVSGTPYDSPKALAVAGAISAIMTGEAYATSAEMAADIGAFPKFAH 950 Query: 571 TTYAKGILPIDTY-------KKDLDTIANEPLHYD---------------WEALRESIKT 608 A + + K+D + ++ P+ D W+ + + Sbjct: 951 NRDAMLRVVRNHRHAAHNAPKEDYEDLSVVPMSLDPAHCPKKLCKVAGETWDRALKLGEK 1010 Query: 609 HGLRNSTLSALMPSE 623 HG RN+ +S + P+ Sbjct: 1011 HGFRNAQVSVIAPTG 1025 Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 30/65 (46%), Gaps = 8/65 (12%) Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL--Y 730 +++++ +Q FI +IS N + ++Q+ + L+++ + +K + Y Sbjct: 1637 IDYMAHVRMMAAVQPFISGAISKTVNMP------AEATVEQIREVYLSSWHYMLKAIALY 1690 Query: 731 YQNTR 735 ++ Sbjct: 1691 RDTSK 1695 >UniRef50_Q0ILJ1 NrdA (Fragment) n=10 Tax=unclassified T4-like viruses RepID=Q0ILJ1_9CAUD Length = 150 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 77/149 (51%), Positives = 101/149 (67%), Gaps = 3/149 (2%) Query: 611 LRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLW 670 +RNSTLSALMP E+SSQ+SN+TNGIEPPRG VS+K SK+G QVVP+ EH D Y+ W Sbjct: 1 IRNSTLSALMPCESSSQVSNSTNGIEPPRGPVSVKESKEGSFNQVVPNIEHNIDLYDYTW 60 Query: 671 EMP--GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT 728 ++ GN YL V IM K++ QS SANT YDP FP GKVPM ++ D+L + +G+K Sbjct: 61 KLAKKGNKPYLTQVAIMLKWVCQSASANTYYDPQIFPKGKVPMSIMIDDMLYGWYYGIKN 120 Query: 729 LYYQNTRDGAEDAQDDLVPSIQDDGCESG 757 YY NTRDG+ + + + + + C S Sbjct: 121 FYYHNTRDGSGTDDYE-IETPKAEDCSSC 148 >UniRef50_Q9DWE5 PR45 n=1 Tax=Rat cytomegalovirus Maastricht RepID=Q9DWE5_RCMVM Length = 1064 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 87/507 (17%), Positives = 174/507 (34%), Gaps = 77/507 (15%) Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCV--------LIEC 230 +FS PR L+ + A+ +F + LP +M+ + Sbjct: 443 AVFSARPRGA-LEVFEAVLSALCSFAVVLPPQVMAHAGLRGGLPL--FEGVAYRPRGVAV 499 Query: 231 GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVK 290 + + + + ++ + + + + I + ++ F T ++ Sbjct: 500 EGTWNG---SMQNVCDLLANGVSVSVQLSDLLGDVAGILKSFGLFCASLRDHRRFDTKLR 556 Query: 291 SCSQGGVRGGAATLFYPMWHLEV---ESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRL 347 +W +++ S ++ EG + Y V + + + R Sbjct: 557 VV-------------VDLWSVDLVYAFSFIL------GEGRAYPELLYAVNVPQFFWERY 597 Query: 348 LKGED---ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS-------IRKQRVKA-- 395 ++ +F S+ L D++ F Y + E + + + + A Sbjct: 598 VEEGASGRWQVFQKSECKSLCRV---DEKGFRTAYERLELEGNGLSLSPWWVVRHLDACV 654 Query: 396 -------VELFSLMMQERASTGRIYIQNVD---HCNTHSPFDPAIAPVRQSNLCLEIALP 445 V ++L TGR+ + + CN+ P ++CLE L Sbjct: 655 ALGNTAVVYPYNLKSAMVGETGRLLLCGPELSLVCNSFLGVFPENKI----DVCLENCLL 710 Query: 446 TKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVR----ALDALLDYQDYPIP 501 D E + L + L L AV +DA++ + Sbjct: 711 EGSGADDAAAATEGEVPVLGH---EVFFSFRSLRVLVRDAVVIGNVLMDAVIRDNVF--- 764 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 A R L + V+ F L + G Y+D ++ L + E + Y ++AS +L Sbjct: 765 GAGDVMCLYRPLQLRVLGFHAVLGRLGLLYTDDASVLLGRRIAEFVHYAAVRASVDLCVH 824 Query: 562 QG-ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALM 620 P F+ + +A G L D + L ++ P + W LRE + +G+RNS Sbjct: 825 GAEPFPKFSRSLFATGRLYPDLFDDPLQETSSLPAGH-WAQLREDVVRYGVRNSAFVCGG 883 Query: 621 PSETSSQISNATNGIEPPRGYVSIKAS 647 E S+ ++ T G+ P +S++ S Sbjct: 884 LGEESANVAGTTPGMFPRAYNLSLEPS 910 >UniRef50_B9Y435 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y435_9FIRM Length = 379 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 3/157 (1%) Query: 170 QFLYILVAACLFSNYPR-ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR-QFSSCVL 227 + + V L R +Y F + + + ++ G + T+ + +C + Sbjct: 128 EQIARRVGTALAEPETDVAQREKYAGLFTEQLKKLNVIPAGRVLFGAGSGTQVTYFNCFV 187 Query: 228 IE-CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ 286 + DS I +++ +S+ G+G N +R +P +G +G + + Sbjct: 188 MPFVEDSRGGIAEHRKEVMEIMSRGGGVGTNGSTLRPKHAPAKGVGGRSSGAVSWLNDIA 247 Query: 287 TAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNR 323 QGG R GA + WH ++ ++ K Sbjct: 248 NLTNLVEQGGSRRGAQMIMLADWHPDIIEFIISKMQN 284 >UniRef50_Q3B5C1 Ribonucleotide reductase family protein n=9 Tax=Bacteria RepID=Q3B5C1_PELLD Length = 1521 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 84/253 (33%), Gaps = 32/253 (12%) Query: 460 ALCTLSAFNLGAINNLD-------ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRT 512 C L++ NL + + EL A L L+ + +P P R + RT Sbjct: 833 TACNLASLNLIHFVDEESGHVKINELRHAAALWTVVLEISVLMAHFPSPDIARLSYEYRT 892 Query: 513 LGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWF---- 568 LG+G N L G Y A L I S E++++ G + Sbjct: 893 LGLGFANLGTVLMVLGIPYDSPKALALAGAISAIITGQAYVTSAEISRDLGPFDGYQANS 952 Query: 569 ---------------NETTYAKGILPIDTYKKDLDTIANEPLHYD---WEALRESIKTHG 610 NE+ L + D + E W+ + K +G Sbjct: 953 KEMLRVIRNHRRAARNESEEEYEELSVKPRGIDSEYCPKELFEAAGSVWDEALQKGKKYG 1012 Query: 611 LRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPDYEH--LHDAYE 667 RN+ +S + P+ T + + T GIEP V K G ++V H L Sbjct: 1013 FRNAQVSVIAPTGTIGLVMDCDTTGIEPEFAIVKFKKLAGGGYFKIVNQSVHKALKRLGY 1072 Query: 668 LLWEMPGNDGYLQ 680 E+ + Y + Sbjct: 1073 AAQEIEEIEKYCK 1085 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 58/414 (14%), Positives = 105/414 (25%), Gaps = 121/414 (29%) Query: 143 FSYAAVKQLEGKYLVQN-------------RVTGEIYESAQFLYILVAACLFSNYPRE-- 187 +S A L KY + G ++ V L + + Sbjct: 47 WSQMAADILAQKYFRKTGVPQVDGDGNPLLDEEGRPVTGSEHSIRQVVHRLAGCWRQWGE 106 Query: 188 -----TRLQYVKRFYD----AVSTFKISLPTPIMSGVRTP-------------------- 218 + + FYD + + + +P Sbjct: 107 KHGYFDSPEDAEAFYDEVAYMLIAQQGAPNSPQWFNTGLNFAYGITGPAQGHYHVDPATK 166 Query: 219 ----------TRQFSSCVLIECGDSL---DSINATSSAIVKYVSQRAGIGINAGRIRALG 265 Q +C + D L I + + +G G N +R+ G Sbjct: 167 KVVESEDAYTRPQAHACFIQSVNDDLVNEGGIFDLAVREARVFKFGSGSGTNYSNLRSSG 226 Query: 266 SPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRG 324 + GG + + F K F +A + GG R A + + H +VE + K Sbjct: 227 EKLSGGGSSSG-LMSFLKIFDSAAGAIKSGGTTRRAAKMVIIDIDHPDVEKFIEWK---A 282 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGL-------------------- 364 E ++V + G +I +++ + + P L Sbjct: 283 REEDKVASLVAGSRICSRFLQAIVEEAILNGADRLENPKLQRLIENALHRAVPMSYIIRV 342 Query: 365 -----YDAFFADQEEFERLYT---------------------------------KYEKDD 386 D EE++ Y E+ Sbjct: 343 LALVEQGYTTLDFEEYDTHYESEAYQTVGGQNSNNTVRVTNAFMKAVENNELWMLKERTT 402 Query: 387 SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 + V A EL+ ++ +Q N PA + SN C+ Sbjct: 403 GKTARAVNARELWEKILLSAWKCADPGLQFDTTINEWHTC-PAAGRINASNPCV 455 Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 12/81 (14%) Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLY 730 + +++++ +Q FI +IS N + ++ + L+ ++ VK T+Y Sbjct: 1207 INHMAHVRMMSSVQPFISGAISKTVNMPAT------ATTAEIGEVYLSGWQHMVKAITVY 1260 Query: 731 YQNTRDGAEDAQDDLVPSIQD 751 RDG++ +Q + S QD Sbjct: 1261 ----RDGSKLSQPLNISSYQD 1277 >UniRef50_C9LEN5 Ribonucleoside-diphosphate reductase n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LEN5_9BACT Length = 775 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 79/533 (14%), Positives = 155/533 (29%), Gaps = 86/533 (16%) Query: 138 DRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFY 197 + + AA +++ + + + A L + + + Sbjct: 16 SKYYEGNEAAACHWIETCALKDASGNLLETTPEATLRRCAGALGRIEAKYPDPVSEEEIF 75 Query: 198 DAVS-TFKISLPTPIMSGVRTPTRQ--FSSCVLIECGD---SLDSINATSSAIVKYVSQR 251 D + +SL TP+++G+ P RQ S I G S + + V + + Sbjct: 76 DFLYPAHHVSLSTPMLAGLGNPHRQAPVSDAFTIGFGPKAYSYNDLLQADEEEVYLLRRG 135 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRG---GAATLFYPM 308 A +G + RI E + + + + Q R GA TL + Sbjct: 136 AALGHDLSRIYPAQLQTEQSEKATPDVVSALERYARS----RQEAARLTACGAITLSLSI 191 Query: 309 WHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF 368 H + E+ + G ++ + I+ + KGE P D Sbjct: 192 KHPDAEAFIDA----GARMRTTAGVNCCLLIDDDFMYAVAKGESYRQQFPVDAES----- 242 Query: 369 FADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 + + A L+ ++++ I D N Sbjct: 243 ------------------PLLATNIDARRLWEKLLRKAMRNEAPEIHFSD--NMLKEQLA 282 Query: 429 AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSA-----FNLGAINNLDELEELAI 483 + T PL + L + F AI + Sbjct: 283 GCYAGARPQALAATLNATIPLATYDSSRLLTV--NLYSYVEQPFTEQAIFDHKLFRRHLF 340 Query: 484 LAVRALDALLDYQDYPI------------------------PAAKRGAMGRRTLGIGVIN 519 L R D L+D ++ I +R + R G+ + Sbjct: 341 LVQRLADDLVDIEEEKIDSMLQNIADAEVPAEAKMIEQKLWEKVRRHLLTYRPTGLLLTG 400 Query: 520 FAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILP 579 A LA G +A T +++ +++ ++A+E+GA ++ A+ L Sbjct: 401 EAETLAALGLSQDTPAAGAHTRALKQSLAIATCESTVKMAEERGAFSDYDAGREAENSLI 460 Query: 580 IDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNAT 632 + D L + ++ G RN + + P+ Q + T Sbjct: 461 LRLRNVAPD-------------LYDRMQKIGRRNLACTIVTPNRPDQQANGTT 500 >UniRef50_C9DC34 Gp50 n=2 Tax=root RepID=C9DC34_9CAUD Length = 677 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 95/590 (16%), Positives = 167/590 (28%), Gaps = 140/590 (23%) Query: 230 CGDSLDS--------INATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF 281 DS + I+ V + + + R+R G+ ++ +G +P Sbjct: 169 IEDSREGWAAALVDLIDTHYRDEVSHFQRV----YDVSRVRPFGAKLKTFGGRASGPLPL 224 Query: 282 YKHFQTAVK----------------------SCSQ----GGVRGGAATLFYPMWHLEVES 315 + + + +Q GGVR A ++E Sbjct: 225 ARMLIDVCEVLSEIATVGGSLNGIAAMEIDHAIAQCVVAGGVRRSARMSMMHWQDPQIEE 284 Query: 316 LLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEF 375 + K G + V ++ L +T L Sbjct: 285 FVRCKQETGKHW----TTNISVVVDDLFWTAL---------------------------- 312 Query: 376 ERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQ 435 + R +A + + + + G + S +P V Sbjct: 313 ------NMPNQVSIMVRDQAHKALTWITDGMVANGEPGF---WDSSLSSQGEPN--EVVC 361 Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN------NLDELEELAILAVRAL 489 +N C EI L E C L NL A + +L L R L Sbjct: 362 TNPCGEITLQ------------EWEPCNLGHINLAAFVKDNGKVDTIDLIRSHRLMARFL 409 Query: 490 DALLDYQDYPI--PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYS----DGSANNLTHKT 543 + P+ P ++ R +G+G + A YLA G+RYS D + Sbjct: 410 ---IRATFSPVGDPKSREVLDRNRRIGVGHLGVASYLAMTGRRYSKAPLDKHFRKTLREL 466 Query: 544 FEAIQYYLLKASNEL-----AKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYD 598 + ++ + S+EL K + P T + + Sbjct: 467 AKEVEQSAQQFSHELRIPVPVKTRTVAPT--GTIAKMPGVSEGIHPIFAKYFNRRIRFSK 524 Query: 599 WEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPD 658 +A E + G + V +KD ++++VV Sbjct: 525 GDAELEKLIDQGY------------------DFEPCQYAQNTVVVTIPTKDTLVQEVVDR 566 Query: 659 YEHLHDAYELLWEMPGNDGYLQLVGIMQK-FIDQSISANTNYDPSRFPSGKV-----PMQ 712 + + E + L + Q + D ++S N DP R+ V Sbjct: 567 FGRDAEEIVESAEDLTLNQLLAFQAMYQMLWADNAVSFTANVDPDRYKPHVVGEQLRTFG 626 Query: 713 QLLKDLLTAYKFGVKTLYYQN-TRDGAEDAQDDLVPSIQDDGCESGACKI 761 LLK + + Y+ T+ + A V D+ C SGAC I Sbjct: 627 GLLKGATIFPESSMPQAPYERITKKQYKAATTKAVADSVDEECASGACPI 676 >UniRef50_B8YMB4 Ribonucleoside-diphosphate reductase (Fragment) n=2 Tax=Human herpesvirus 3 RepID=B8YMB4_HHV3 Length = 375 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 59/396 (14%), Positives = 137/396 (34%), Gaps = 57/396 (14%) Query: 19 LDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDY- 77 + +H +++ + + I E + ++ + I T I+ + +D Y Sbjct: 7 FNTVHDIINRLCQHGYKEYIIPPESTTPVELMEYIST------IVSKLKAVTRQDERVYR 60 Query: 78 ---QYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVE--MGKYDNHLLEDYTEEEFKQMD 132 + + R+ + + + + L V + +E + +LE + ++++ + Sbjct: 61 CCGELIHCRINLRSVSMETWLTSPILCLTPRVRQAIEGRRDEIRRAILEPFLKDQYPALA 120 Query: 133 TFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRL-- 190 T + + E YL + ES ++ +AA + + ++ Sbjct: 121 T---------LGLQSALKYEDFYLTKLEEGK--LESLCQFFLRLAATVTTEIVNLPKIAT 169 Query: 191 ------------QYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSL---D 235 + F+ A++ KI TP+M + T +SC L++ S+ Sbjct: 170 LIPGINDGYTWTDVCRVFFTALACQKIVPATPVMMFLGRETGATASCYLMDPE-SITVGR 228 Query: 236 SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQG 295 ++ A + + + R G+GI+ + + E G + K V + + Sbjct: 229 AVRAITGDVGTVLQSRGGVGISLQSLNLIP-----TENQTKGLLAVLKLLDCMVMAINSD 283 Query: 296 GVRGGAATLFYPMWHLEVESLLVLKNNRG-VEGNRVRHMDYGVQINKLMYTRLL------ 348 R ++ WH++++++L + E R ++ + L + R L Sbjct: 284 CERPTGVCVYIEPWHVDLQTVLATRGMLVRDEIFRCDNIFCCLWTPDLFFERYLSYLKGA 343 Query: 349 KGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK 384 TLF E F Y + E+ Sbjct: 344 SNVQWTLFD----NRADILRTLHGEAFTSTYLRLER 375 >UniRef50_O64240 Putative adenosylcobalamin-dependent ribonucleoside-triphosphate reductase n=5 Tax=Siphoviridae RepID=VG50_BPMD2 Length = 693 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 99/655 (15%), Positives = 171/655 (26%), Gaps = 226/655 (34%) Query: 218 PTRQFSS--------CVLIECGDSLDSINATSSAIVKYVSQRAGIG-----INAGRIRAL 264 Q SS + DS + A ++ R + + R+RA Sbjct: 153 EAGQLSSRYDSDWVDAFV--IEDSREGWAAALVDLIDTH-YRDDVAHKERVYDVSRVRAA 209 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVK------------------------------SCSQ 294 G ++ +G +P K + + +Q Sbjct: 210 GRKLKTFGGTASGPVPLAKMLTEVSEILSRCAREGEQYRFEDGGALTGLDAMEIDHAIAQ 269 Query: 295 ----GGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKG 350 GGVR A +VE+ +K + G + V+++ ++ Sbjct: 270 CVVAGGVRRSARMAMMHWADWQVETFTNIKQDSGSHW----TTNISVEVDDAFWSLAKA- 324 Query: 351 EDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTG 410 D + + KA + + + G Sbjct: 325 ---------------------------------PVDPLNPRSTKAHRVLKALSEGAVRNG 351 Query: 411 RIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG 470 + + N P + V +N C EI L +P C L NL Sbjct: 352 EPGMWDSSLSNVGEPNE-----VVCTNPCGEITL--EPWEP----------CNLGHINLA 394 Query: 471 AIN------NLDELEELAILAVRALDALLDYQDYPI--PAAKRGAMGRRTLGIGVINFAY 522 A + +L L R L + + P ++ R +G+G + A Sbjct: 395 AFVTDAGKTDYIDLIRAHRLMTRFL---IRATFSAVADPKSREVLDRNRRIGVGHLGVAS 451 Query: 523 YLAKHGKRY----SDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGIL 578 YLA G+RY D + + + S+EL + P T G Sbjct: 452 YLALTGRRYSQAPGDKRFTAFLREMAAEVDRAAEEFSHEL---RIPVPVKKRTVAPTG-- 506 Query: 579 PIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPP 638 T +++ + GI P Sbjct: 507 ---------------------------------------------TIAKMPGVSEGIHPI 521 Query: 639 RGYVSIKASKDGIL---------RQVVPDYEHLHDAYE-----LLWEMPGNDGYLQLVGI 684 I+ + +L + Y D Y+ + E+P D ++ V Sbjct: 522 FSRYFIRRIRFSVLDNDQFLTASQYAADGYHVEKDQYDKSGNTWVVEIPTKDTLVEAVAA 581 Query: 685 M-----------------------QK-----FIDQSISANTNYDPSRFPSGKVPMQQLLK 716 Q + D ++S N DP + V Sbjct: 582 RFGRDAEDIVESANELTLHQLLAFQALYQTCWADNAVSFTANVDPDAYEGVDVAADLQRF 641 Query: 717 DLLTAYKFGVKTLY---------YQN-TRDGAEDAQDDLVPSIQDDGCESGACKI 761 L G T++ Y+ T+ E A V D+ C +GAC I Sbjct: 642 SGLI---KGS-TIFPEESFPQAPYERITKQQYEAAAIKAVADGVDEECANGACPI 692 >UniRef50_Q96525 Ribonucleotide reductase RNR1 like protein (Fragment) n=6 Tax=Viridiplantae RepID=Q96525_ARATH Length = 236 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 63/205 (30%), Gaps = 47/205 (22%) Query: 576 GILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGI 635 GIL D + +DW LR+ I +G+RNS L A MP+ ++SQI Sbjct: 1 GILQPDMWNVIPSD------RWDWAVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 54 Query: 636 EPPRGYVSIKASKDGILRQVVPDYEH---------------------------------L 662 EP + + G V H L Sbjct: 55 EPYTSNIYSRXVLSGEFVVVNKHLLHDLTDMGLWTPTLKNKLINENGSIVTCLLRYPDDL 114 Query: 663 HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAY 722 Y +WE+ ++ IDQS + P Q + Sbjct: 115 KAIYRTVWEIITXRQWVNWAADCGCNIDQSQGLKL-------TTWTNPTSQNSFVHFYTW 167 Query: 723 KFGVKT-LYYQNTRDGAEDAQDDLV 746 K KT +YY +R A+ + + Sbjct: 168 KRVWKTGMYYLRSRAAADAIKFTVD 192 >UniRef50_Q58N39 Ribonucleotide reductase domain-containing protein n=3 Tax=root RepID=Q58N39_BPPRP Length = 468 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 105/321 (32%), Gaps = 87/321 (27%) Query: 220 RQFSSCVLIECGDSL---DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAF-- 274 R SC + DS+ D I A+ + + AG+ ++ ++R G+ G Sbjct: 26 RLPVSCTIFVVEDSMEGKDGIEASWRFVSHALRFGAGVAVHLSKLRPAGTRTNKGPDTLV 85 Query: 275 HTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHM 333 +G + F K + T + +GG R GA L + H ++ + +K R + Sbjct: 86 ASGPVSFAKIYSTLNEILRRGGTYRNGACVLHLDINHPDIIDFVQVKRQELPWVKRCVDL 145 Query: 334 DYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRV 393 E + + R + Sbjct: 146 ---------------TREQWS------------------------------NTETRTKE- 159 Query: 394 KAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN 453 ++Q A G I++ + + N SN+CLE+ LP++ + Sbjct: 160 -------AIIQGIAR-GDIWLNKIKYDND--------GNRIYSNVCLEVYLPSRGTCLLQ 203 Query: 454 DENGEIALCTLSAFNLGA---INNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGR 510 N ++ C + G +++L +L + + +Y P Sbjct: 204 HLN--MSACRIGDIREGMREGMSDLCKLHSRTGIE--------ESGEYLAPDID------ 247 Query: 511 RTLGIGVINFAYYLAKHGKRY 531 R +G G++ A +LA + Y Sbjct: 248 RQVGFGLLGLANFLANNKITY 268 >UniRef50_C6BQC0 Ribonucleotide reductase alpha subunit-like protein n=1 Tax=Ralstonia pickettii 12D RepID=C6BQC0_RALP1 Length = 442 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 18/147 (12%) Query: 470 GAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGK 529 + LEE LAVR LD++ D ++ + + +G R +GIG+ A+ L + G Sbjct: 230 NNWFDSKRLEEQIRLAVRELDSMHDVKET-LGCLGQPGLG-RRIGIGISGVAFALQQLGV 287 Query: 530 RYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDT 589 + A + ++ +AS +LA+E GA PWF+ + G + D Sbjct: 288 AGNADKARAALAQVTRIVRDEAYRASCDLAEEVGASPWFDSVEFHTGPV--------ADQ 339 Query: 590 IANEPLHYDWEALRESIKTHGLRNSTL 616 + E L E I+T+GLRN+ + Sbjct: 340 LPPE--------LVERIRTYGLRNAHI 358 >UniRef50_Q0ILH0 NrdA (Fragment) n=1 Tax=Enterobacteria phage TuIa RepID=Q0ILH0_9CAUD Length = 105 Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 48/107 (44%), Positives = 61/107 (57%), Gaps = 5/107 (4%) Query: 657 PDYEHLHDAYELLWEMP--GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL 714 P+ EH Y+ W++ GN YL V IM K++ QS SANT YDP+ F GKVPM + Sbjct: 2 PNIEHNMSLYDYAWKLAKKGNKPYLTQVAIMLKWVCQSASANTYYDPAVFEKGKVPMSVM 61 Query: 715 LKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 L DLL + FG K LYY NTRDG+ +L +D ACK+ Sbjct: 62 LDDLLYFWYFGGKNLYYHNTRDGSGTDDYELETPKAED---CSACKL 105 >UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Chloroflexi (class) RepID=A7NFN4_ROSCS Length = 769 Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 77/559 (13%), Positives = 155/559 (27%), Gaps = 102/559 (18%) Query: 6 LVTKRDGSTERINLDKIHRVL--DWAAEGLHNVSISQVELRSHIQFYDGIK--------- 54 + KRDG ++ +I + +A+ G + + + Sbjct: 29 TIIKRDGRVVPFDVTRIENAMARCFASFGRTPDTPIPELAQRVVNIVAAKSQGKPPTVEG 88 Query: 55 TSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGK 114 DI E +++AA + + AA+ I + ++A + P E Sbjct: 89 VQDIVEMVLQAAGE----------FEAAKRYILYRAERARERERRPIPDHVRRAFDEARV 138 Query: 115 YDN------HLLEDYTEEEFK--QMDTFI---DHDRDMTFSYAAVKQLEGKYLVQNRVTG 163 Y + Y+ + + +T+I D D A + Y R+ Sbjct: 139 YFPTPLQQFQFFDKYSRFNYDLGRRETWIETVDRAVDYLHELAGDRLPRETY---ERIRR 195 Query: 164 EIYESAQFLYILVAACLFSNYPRETRL----------QYVKRFYDAV------STFKISL 207 I E + + + R + + + F +A+ S+ Sbjct: 196 SILEMRAMPSMRL-LAMAGPAARRNAVAIYNCSYQPVESIDSFVEALIISMAGCGVGFSV 254 Query: 208 PTPIMSGVRTPTRQ---FSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRAL 264 + + RQ + + DS + ++ + + + +R Sbjct: 255 ESRYVENFPRIKRQTGKPPTTFV--VEDSAEGWADALRYGLETWFEGGDVHFDLSHLRPA 312 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 G+P+R +G PF R G+ ++ Sbjct: 313 GAPLRTKGGRASGPEPFRAMLDFVRNRIF---ARQGSFLRPIDAH--DIM---------- 357 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK 384 + V + + I+LF D + E + + Sbjct: 358 -----CAVGNAAVS------GGVRRTAMISLFDYDDDEMRLAKSGDFERENSQRWNANNS 406 Query: 385 D--DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEI 442 +++ + F M++ + G I N + N P A +N C EI Sbjct: 407 AVWPRGGLTQLEFIRHFMEMVESQR--GEPGIFNREASNLMKPARRKEAEF-GTNPCGEI 463 Query: 443 ALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYP--I 500 L C LSA + D L + +A +P Sbjct: 464 VLRPWQF------------CNLSAAVARVDDTFDTLRDKVEVATIIGTIQSLATHFPGLR 511 Query: 501 PAAKRGAMGRRTLGIGVIN 519 P ++ R LG+ + Sbjct: 512 PMWRQNCEEERLLGVDITG 530 >UniRef50_A6Q367 Probable adenosylcobalamin-dependent ribonucleoside-triphosphate reductase n=1 Tax=Nitratiruptor sp. SB155-2 RepID=RTPR_NITSB Length = 650 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 75/486 (15%), Positives = 153/486 (31%), Gaps = 134/486 (27%) Query: 256 INAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVES 315 + +IR GSP++ G P + H ++E Sbjct: 198 FDYSKIRPAGSPLKTFGGIAPGPEPLKRL-------------------------HKKIEQ 232 Query: 316 LLVLKNNRGVEGNRV---RHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQ 372 +L ++ ++ R + G+ + R + I + P D L+ D Sbjct: 233 ILDDYLDKKIDKTRCVVDLFNNIGLCVVSGNIRRSAE---IAIGRPGDKTFLH---LKDY 286 Query: 373 EEF-ERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAI- 430 E+F ER + ++S+ + + + AS G + ++++ + F + Sbjct: 287 EKFPERKEYGWISNNSVVIENLDDFHYIDAITSLIASNGEPGVLHLENMQKYGRFGEIVP 346 Query: 431 APVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALD 490 SN C EIAL + LC LS + +N ++ ++L A Sbjct: 347 DRAWLSNPCGEIALESYE------------LCNLSEIFISKCSNEEDFQKLIEYATFYAS 394 Query: 491 ALLDYQDYPI--PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQ 548 + P P R +G+ V A + K G + ++ Sbjct: 395 TV---NLLPTHRPETNEIIARNRRIGVSVSGVADAIEKFGL-----------ETIIKWLR 440 Query: 549 --YYLLKASNE-LAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRES 605 Y ++ NE LAKE G +P+ Sbjct: 441 KGYEKVRTVNERLAKEAG--------------IPVSLK---------------------- 464 Query: 606 IKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQ-----VVPDYE 660 ++ + PS T S ++ + G+ P +++ + G + + Sbjct: 465 ----------VTCVKPSGTISILAGTSPGMHYPLATYALRRIRIGKTSKLAKLLIDSGLS 514 Query: 661 HLHDAYE----------------LLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRF 704 D Y+ + E+ + L L + +++ D +S +DP+R+ Sbjct: 515 FEEDIYDKNSYVFAFPIHYDNPRSIKEVDIYEQMLVLTMLQREWADNMVSNTIQFDPTRY 574 Query: 705 PSGKVP 710 + + Sbjct: 575 DAKDLS 580 >UniRef50_Q30CC9 Ribonucleoside diphosphate reductase large subunit (Fragment) n=1 Tax=Enterobacteria phage RB2 RepID=Q30CC9_9CAUD Length = 85 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 3/88 (3%) Query: 674 GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQN 733 GN YL V IM K++ QS S+N + DP FP GKVPM ++ DLL + FG K YY N Sbjct: 1 GNKPYLTQVAIMLKWVCQSASSNRHNDPQIFPKGKVPMSIMIDDLLYFWYFGGKNFYYHN 60 Query: 734 TRDGAEDAQDDLVPSIQDDGCESGACKI 761 TRDG+ ++ DD ACK+ Sbjct: 61 TRDGSGTDDYEIETPKADD---CAACKL 85 >UniRef50_B4CZD1 Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZD1_9BACT Length = 159 Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 16/121 (13%) Query: 649 DGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGK 708 DG ++Q+ L Y+ +E+ LQ QK+IDQ+ S N S Sbjct: 34 DGSVQQIDRVPAELKRLYKTAFEI-APTWILQCAAARQKWIDQAQSTNLWLAESD----- 87 Query: 709 VPMQQLLKDLLTAYKFGVKTLYYQNT--RDGAEDAQDD------LVPSIQDDGCESGACK 760 + A++ G+KT YY T + + + D P + E +C Sbjct: 88 --ARTASFMYREAWERGLKTTYYLRTLNKSAIDSSNRDRRATTAPEPKREYSAEEKQSCS 145 Query: 761 I 761 I Sbjct: 146 I 146 >UniRef50_B9GT86 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GT86_POPTR Length = 129 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 40/159 (25%), Gaps = 60/159 (37%) Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKS-CSQGGVRGGAATLFYPMWHLEVESLLVLKN 321 GS IRG + G +P + F + + G Sbjct: 8 PTGSSIRGEDGASNGFVPTLRVFNHTDRYLIKEEGR------------------------ 43 Query: 322 NRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTK 381 G E R + + + I L R+ Sbjct: 44 --GKEERRAQDLFCALWIPDLFIERVRGDGSW---------------------------- 73 Query: 382 YEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC 420 +K+ V A +L+ ++ + TG Y+ D Sbjct: 74 -----KGQKKVVSARKLWFEILNSQTETGTPYMLFHDTV 107 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P00452 Ribonucleoside-diphosphate reductase 1 subunit a... 801 0.0 UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alp... 763 0.0 UniRef50_C8WWY9 Ribonucleoside-diphosphate reductase n=15 Tax=Fi... 761 0.0 UniRef50_P48591 Ribonucleoside-diphosphate reductase large subun... 754 0.0 UniRef50_P23921 Ribonucleoside-diphosphate reductase large subun... 754 0.0 UniRef50_C1FEX6 Ribonucleoside-diphosphate reductase n=4 Tax=Chl... 753 0.0 UniRef50_A8P6Y3 Ribonucleoside-diphosphate reductase n=1 Tax=Bru... 749 0.0 UniRef50_C5LWW8 Ribonucleoside-diphosphate reductase n=4 Tax=Euk... 745 0.0 UniRef50_Q8K9W3 Ribonucleoside-diphosphate reductase subunit alp... 735 0.0 UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 734 0.0 UniRef50_D1CID8 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 729 0.0 UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alp... 718 0.0 UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=ce... 713 0.0 UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=ce... 711 0.0 UniRef50_A4XD09 Ribonucleoside-diphosphate reductase n=44 Tax=Ba... 699 0.0 UniRef50_Q9QAL9 Ribonucleoside-diphosphate reductase n=2 Tax=Shr... 699 0.0 UniRef50_Q75BW6 Ribonucleoside-diphosphate reductase n=2 Tax=Sac... 688 0.0 UniRef50_C5DEU8 Ribonucleoside-diphosphate reductase n=2 Tax=Sac... 687 0.0 UniRef50_Q8JKL8 Ribonucleoside-diphosphate reductase n=1 Tax=Hel... 687 0.0 UniRef50_C5DY80 Ribonucleoside-diphosphate reductase n=1 Tax=Zyg... 686 0.0 UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alp... 686 0.0 UniRef50_C7NLI3 Ribonucleoside-diphosphate reductase n=1 Tax=Kyt... 684 0.0 UniRef50_D1BPH5 Ribonucleoside-diphosphate reductase n=3 Tax=Vei... 683 0.0 UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subu... 680 0.0 UniRef50_B0R7R5 Ribonucleoside-diphosphate reductase n=2 Tax=Hal... 676 0.0 UniRef50_A9KRT3 Ribonucleoside-diphosphate reductase n=2 Tax=Clo... 675 0.0 UniRef50_C1VDU7 Ribonucleoside-diphosphate reductase n=1 Tax=Hal... 672 0.0 UniRef50_D2E8G7 Ribonucleoside-diphosphate reductase n=1 Tax=Ang... 668 0.0 UniRef50_C7NVI1 Ribonucleoside-diphosphate reductase n=2 Tax=Hal... 661 0.0 UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Ba... 657 0.0 UniRef50_Q7T6Y8 Ribonucleoside-diphosphate reductase large subun... 655 0.0 UniRef50_B7FY00 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 649 0.0 UniRef50_P74240 Ribonucleoside-diphosphate reductase subunit alp... 643 0.0 UniRef50_C4V8X4 Ribonucleoside-diphosphate reductase n=1 Tax=Nos... 643 0.0 UniRef50_O12935 Ribonucleoside-diphosphate reductase n=1 Tax=Spo... 642 0.0 UniRef50_B9L2K7 Ribonucleoside-diphosphate reductase n=1 Tax=The... 642 0.0 UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Ba... 640 0.0 UniRef50_C9KMB2 Ribonucleoside-diphosphate reductase n=1 Tax=Mit... 639 0.0 UniRef50_B7SW23 Ribonucleoside-diphosphate reductase n=1 Tax=Spo... 636 0.0 UniRef50_Q2P8D3 Ribonucleoside-diphosphate reductase n=66 Tax=ro... 634 e-180 UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alp... 631 e-179 UniRef50_C8XUI7 NrdA ribonucleoside-diphosphate reductase alpha ... 631 e-179 UniRef50_A5TVY2 Ribonucleoside-diphosphate reductase n=15 Tax=Fu... 629 e-178 UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Cal... 621 e-176 UniRef50_B7XJ88 Ribonucleoside-diphosphate reductase n=2 Tax=Ent... 618 e-175 UniRef50_B2V806 Ribonucleoside-diphosphate reductase n=2 Tax=Aqu... 615 e-174 UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 612 e-173 UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Su... 604 e-171 UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyd... 599 e-169 UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 599 e-169 UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=The... 595 e-168 UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 594 e-168 UniRef50_A2PYM5 Ribonucleoside-diphosphate reductase n=4 Tax=Myo... 593 e-168 UniRef50_UPI000194E523 PREDICTED: ribonucleoside-diphosphate red... 588 e-166 UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Met... 587 e-166 UniRef50_A9WCH6 Ribonucleoside-diphosphate reductase n=3 Tax=Chl... 584 e-165 UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Bra... 573 e-161 UniRef50_A7KUZ9 Nrd alpha subunit n=2 Tax=root RepID=A7KUZ9_9CAUD 571 e-161 UniRef50_Q3ZZA0 Ribonucleoside-diphosphate reductase n=27 Tax=ce... 563 e-158 UniRef50_B7R7T8 Ribonucleoside-diphosphate reductase n=2 Tax=The... 562 e-158 UniRef50_B8J271 Ribonucleoside-diphosphate reductase n=11 Tax=Ba... 559 e-157 UniRef50_A3EPA5 Ribonucleoside-diphosphate reductase n=3 Tax=Lep... 559 e-157 UniRef50_B5Y7X0 Ribonucleoside-diphosphate reductase n=1 Tax=Cop... 558 e-157 UniRef50_B0KCF5 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 555 e-156 UniRef50_B8HJ14 Ribonucleoside-diphosphate reductase n=158 Tax=r... 555 e-156 UniRef50_D0ME23 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 551 e-155 UniRef50_Q67KQ2 Ribonucleoside-diphosphate reductase n=1 Tax=Sym... 550 e-155 UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=ce... 549 e-154 UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyr... 549 e-154 UniRef50_P0A5W9 Ribonucleoside-diphosphate reductase subunit alp... 549 e-154 UniRef50_D1CDG6 Ribonucleoside-diphosphate reductase n=1 Tax=The... 548 e-154 UniRef50_C1A6X4 Ribonucleoside-diphosphate reductase n=1 Tax=Gem... 546 e-154 UniRef50_Q160T8 Ribonucleoside-diphosphate reductase n=25 Tax=Al... 545 e-153 UniRef50_B3RGP4 Ribonucleoside triphosphate reductase alpha chai... 545 e-153 UniRef50_B4UA32 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 543 e-152 UniRef50_B2A494 Ribonucleoside-diphosphate reductase n=16 Tax=ce... 541 e-152 UniRef50_B5YGJ2 Ribonucleoside-diphosphate reductase n=12 Tax=ce... 540 e-152 UniRef50_C1D7Z3 Ribonucleoside-diphosphate reductase n=5 Tax=Bet... 535 e-150 UniRef50_C6P0N4 Ribonucleoside-diphosphate reductase, adenosylco... 535 e-150 UniRef50_Q1IXG5 Ribonucleoside-diphosphate reductase n=6 Tax=Bac... 533 e-150 UniRef50_A8LK99 Ribonucleoside-diphosphate reductase n=25 Tax=Ba... 533 e-150 UniRef50_C5WF13 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 533 e-150 UniRef50_C3XAC6 Ribonucleoside-diphosphate reductase n=3 Tax=Bet... 533 e-149 UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=My... 531 e-149 UniRef50_Q6R7H4 Ribonucleoside-diphosphate reductase large subun... 528 e-148 UniRef50_P26685 Ribonucleoside-diphosphate reductase large subun... 526 e-148 UniRef50_B1XZE5 Ribonucleoside-diphosphate reductase n=11 Tax=Be... 523 e-146 UniRef50_P78027 Ribonucleoside-diphosphate reductase subunit alp... 523 e-146 UniRef50_P50620 Ribonucleoside-diphosphate reductase subunit alp... 521 e-146 UniRef50_A7I485 Ribonucleoside-diphosphate reductase n=6 Tax=Met... 520 e-146 UniRef50_UPI0001792B32 PREDICTED: similar to AGAP010198-PA n=1 T... 519 e-145 UniRef50_Q2T3W9 Ribonucleotide reductase system n=37 Tax=Burkhol... 515 e-144 UniRef50_Q66LW9 Ribonucleoside-diphosphate reductase 1 alpha cha... 514 e-144 UniRef50_C6QBB0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyp... 514 e-144 UniRef50_D2BQ84 Ribonucleoside-diphosphate reductase n=32 Tax=La... 514 e-144 UniRef50_Q6AJC4 Ribonucleoside-diphosphate reductase n=1 Tax=Des... 509 e-142 UniRef50_B4W8S5 Ribonucleoside-diphosphate reductase n=2 Tax=Cau... 509 e-142 UniRef50_A2DI13 Ribonucleoside-diphosphate reductase n=1 Tax=Tri... 508 e-142 UniRef50_C6IVG4 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 506 e-141 UniRef50_Q2LW62 Ribonucleoside-diphosphate reductase n=1 Tax=Syn... 505 e-141 UniRef50_Q2RP92 Ribonucleotide reductase large subunit n=1 Tax=R... 503 e-140 UniRef50_C6D5S5 Ribonucleoside-diphosphate reductase, adenosylco... 501 e-140 UniRef50_B1V8V8 Ribonucleoside-diphosphate reductase n=61 Tax=Ba... 500 e-140 UniRef50_Q11ZE1 Ribonucleotide reductase large subunit n=2 Tax=B... 496 e-138 UniRef50_A7HK53 Ribonucleoside-diphosphate reductase n=11 Tax=Th... 496 e-138 UniRef50_B3SZX1 Putative Ribonucleotide reductase, barrel domain... 494 e-138 UniRef50_C4NT50 Putative ribonucleoside-diphosphate redutase n=2... 494 e-138 UniRef50_Q8SCK6 PHIKZ306 n=2 Tax=phiKZ-like viruses RepID=Q8SCK6... 493 e-137 UniRef50_B1HSG6 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 489 e-136 UniRef50_Q8SCB8 Large subunit ribonucleotide reductase n=6 Tax=u... 487 e-136 UniRef50_Q120H3 Ribonucleotide reductase large subunit n=1 Tax=P... 484 e-135 UniRef50_Q3SMN2 Ribonucleoside-diphosphate reductase n=1 Tax=Thi... 483 e-134 UniRef50_Q21U31 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 472 e-131 UniRef50_C4RH87 Ribonucleoside-diphosphate reductase n=1 Tax=Mic... 472 e-131 UniRef50_Q2N7C2 Ribonucleoside-diphosphate reductase n=90 Tax=ro... 467 e-130 UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Ali... 464 e-129 UniRef50_B9KZV2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 463 e-129 UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=ce... 459 e-127 UniRef50_A4VFR5 Ribonucleoside-diphosphate reductase n=32 Tax=Pr... 458 e-127 UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=... 458 e-127 UniRef50_D2EFV5 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 457 e-127 UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hyd... 456 e-126 UniRef50_Q8V6N4 Ribonucleotide reductase n=2 Tax=Haloviruses Rep... 450 e-125 UniRef50_P09853 Ribonucleoside-diphosphate reductase large subun... 446 e-123 UniRef50_A9J500 Putative uncharacterized protein gp07 n=2 Tax=un... 446 e-123 UniRef50_Q5DN91 Ribonucleotide reductase n=1 Tax=Phage phiJL001 ... 445 e-123 UniRef50_Q6MNP6 Vitamin B12-dependent ribonucleotide reductase n... 444 e-123 UniRef50_B1HS20 Ribonucleoside-diphosphate reductase n=28 Tax=Ba... 441 e-122 UniRef50_Q7UI46 Vitamin B12-dependent ribonucleotide reductase n... 439 e-121 UniRef50_D2R4B9 Ribonucleoside-diphosphate reductase, adenosylco... 437 e-121 UniRef50_O69981 Vitamin B12-dependent ribonucleotide reductase n... 437 e-121 UniRef50_D0LZM4 Ribonucleoside-diphosphate reductase, adenosylco... 437 e-121 UniRef50_A7HCF4 Ribonucleoside-diphosphate reductase, adenosylco... 437 e-120 UniRef50_C6JQA3 Putative uncharacterized protein n=2 Tax=Fusobac... 434 e-120 UniRef50_A4IY36 Ribonucleoside-diphosphate reductase n=26 Tax=ro... 434 e-120 UniRef50_Q6UDJ2 Ribonucleoside-diphosphate reductase n=2 Tax=Ilt... 433 e-119 UniRef50_C9MSK4 Ribonucleoside-diphosphate reductase n=8 Tax=Pre... 429 e-118 UniRef50_B2UIU6 Ribonucleoside-diphosphate reductase n=3 Tax=Ral... 429 e-118 UniRef50_C9L7Y1 Ribonucleoside-diphosphate reductase, adenosylco... 428 e-118 UniRef50_Q1ISM3 Ribonucleoside-diphosphate reductase n=3 Tax=Bac... 426 e-117 UniRef50_C6LFM8 Ribonucleoside-diphosphate reductase, adenosylco... 424 e-117 UniRef50_C9M6M1 Ribonucleoside-diphosphate reductase, adenosylco... 424 e-117 UniRef50_A0MN59 Ribonucleotide reductase alpha subunit n=1 Tax=T... 422 e-116 UniRef50_Q5L9C8 Ribonucleoside-diphosphate reductase n=26 Tax=Ba... 422 e-116 UniRef50_B4D0S2 Ribonucleoside-diphosphate reductase, adenosylco... 421 e-116 UniRef50_Q6VMN2 Ribonucleoside-diphosphate reductase n=10 Tax=To... 420 e-116 UniRef50_C1XXN0 Ribonucleoside-diphosphate reductase n=1 Tax=Mei... 415 e-114 UniRef50_B9LSK3 Ribonucleoside-diphosphate reductase n=9 Tax=roo... 415 e-114 UniRef50_A7IY07 Ribonucleoside-diphosphate reductase n=3 Tax=Chl... 412 e-113 UniRef50_C8WXT6 Ribonucleoside-diphosphate reductase, adenosylco... 410 e-113 UniRef50_B6YRR4 Ribonucleoside-diphosphate reductase n=21 Tax=ro... 408 e-112 UniRef50_Q66663 Ribonucleoside-diphosphate reductase n=8 Tax=roo... 407 e-112 UniRef50_B7KJK7 Ribonucleoside-diphosphate reductase n=4 Tax=Cya... 407 e-112 UniRef50_Q1J1T0 Ribonucleoside-diphosphate reductase n=3 Tax=Dei... 403 e-110 UniRef50_A5FCJ4 Ribonucleoside-diphosphate reductase, alpha chai... 402 e-110 UniRef50_D1Y8J0 Ribonucleoside-diphosphate reductase, adenosylco... 402 e-110 UniRef50_C1F6S8 Ribonucleoside-diphosphate reductase, adenosylco... 400 e-110 UniRef50_Q01037 Ribonucleoside-diphosphate reductase large subun... 399 e-109 UniRef50_C9LXZ2 Ribonucleoside-diphosphate reductase, adenosylco... 397 e-109 UniRef50_Q77MS1 Ribonucleoside-diphosphate reductase n=9 Tax=Her... 397 e-109 UniRef50_Q2S5T5 Ribonucleoside-diphosphate reductase, adenosylco... 397 e-109 UniRef50_D2RTR9 Ribonucleoside-diphosphate reductase, adenosylco... 395 e-108 UniRef50_Q76Z42 NrdA-A aerobic NDP reductase large subunit n=1 T... 389 e-106 UniRef50_O41962 Ribonucleoside-diphosphate reductase n=3 Tax=Mur... 388 e-106 UniRef50_P50643 Ribonucleoside-diphosphate reductase large subun... 384 e-105 UniRef50_B4RFH2 Ribonucleoside-diphosphate reductase alpha chain... 383 e-104 UniRef50_B0C346 Ribonucleoside-diphosphate reductase, adenosylco... 382 e-104 UniRef50_D1C7D7 Ribonucleoside-diphosphate reductase, adenosylco... 382 e-104 UniRef50_Q196Z5 Ribonucleoside-diphosphate reductase large subun... 380 e-104 UniRef50_B9L1R5 B12-dependent ribonucleoside diphosphate reducta... 372 e-101 UniRef50_Q97K72 Ribonucleotide reductase, vitamin B12-dependent ... 371 e-101 UniRef50_D1ABC6 Ribonucleoside-diphosphate reductase, adenosylco... 370 e-100 UniRef50_D0J9D2 Ribonucleoside-diphosphate reductase n=2 Tax=Bla... 368 e-100 UniRef50_Q3KSU5 Ribonucleoside-diphosphate reductase large subun... 365 2e-99 UniRef50_Q897Z5 Ribonucleoside-diphosphate reductase (Vitamin B1... 360 1e-97 UniRef50_A5EVD2 Ribonucleotide reductase, alpha subunit n=30 Tax... 350 1e-94 UniRef50_A2BL44 Ribonucleoside-diphosphate reductase n=2 Tax=Des... 349 2e-94 UniRef50_Q8UEM4 Vitamin B12-dependent ribonucleotide reductase n... 335 3e-90 UniRef50_Q3JIM4 Ribonucleoside reductase, intein-containing n=47... 332 2e-89 UniRef50_UPI000155436D hypothetical protein ORF029 n=1 Tax=Pseud... 329 2e-88 UniRef50_C6BZ68 Ribonucleoside-diphosphate reductase n=1 Tax=Des... 328 3e-88 UniRef50_D2XAL3 Ribonucleoside diphosphate reductase alpha subun... 326 2e-87 UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=The... 323 2e-86 UniRef50_C9DFZ9 Ribonucleotide-diphosphate reductase subunit alp... 321 7e-86 UniRef50_Q3AEA3 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 320 1e-85 UniRef50_UPI00019240FD PREDICTED: similar to ribonucleotide-diph... 317 8e-85 UniRef50_D1JF25 Ribonucleoside-diphosphate reductase n=1 Tax=unc... 316 1e-84 UniRef50_A4WLF4 Ribonucleoside-diphosphate reductase n=2 Tax=The... 315 4e-84 UniRef50_B2UNR7 Ribonucleoside-diphosphate reductase, adenosylco... 311 5e-83 UniRef50_A7IYE5 Putivate ribonucleotide reductase n=5 Tax=root R... 307 8e-82 UniRef50_Q18GD3 Ribonucleoside-diphosphate reductase n=1 Tax=Hal... 307 1e-81 UniRef50_B8G0R6 Ribonucleoside-diphosphate reductase n=5 Tax=Bac... 300 1e-79 UniRef50_C9RBG7 Ribonucleoside-diphosphate reductase n=1 Tax=Amm... 300 1e-79 UniRef50_Q19CR5 Ribonucleotide reductase A subunit n=3 Tax=uncla... 300 1e-79 UniRef50_C4XRN9 Ribonucleoside-diphosphate reductase n=2 Tax=Des... 300 2e-79 UniRef50_O26748 Ribonucleoside-diphosphate reductase n=1 Tax=Met... 299 2e-79 UniRef50_UPI0001923DF2 PREDICTED: hypothetical protein, partial ... 299 3e-79 UniRef50_B2KX75 Ribonucleoside-diphosphate reductase n=2 Tax=Spo... 295 5e-78 UniRef50_O31875 Bsu nrdEB intein n=33 Tax=root RepID=NRDEB_BACSU 295 5e-78 UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=The... 291 6e-77 UniRef50_B6IYQ9 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 286 2e-75 UniRef50_A4L245 Ribonucleotide reductase large subunit n=1 Tax=G... 285 3e-75 UniRef50_A3QTY4 Ribonucleotide reductase large subunit n=2 Tax=O... 284 1e-74 UniRef50_Q6QXF6 ORF37 n=3 Tax=Baculoviridae RepID=Q6QXF6_GVAS 280 1e-73 UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyr... 280 1e-73 UniRef50_Q91ES8 ORF127 RR1 n=2 Tax=Baculoviridae RepID=Q91ES8_GVCP 278 4e-73 UniRef50_B1I483 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 277 1e-72 UniRef50_A1TJY2 Ribonucleoside-diphosphate reductase, adenosylco... 275 7e-72 UniRef50_D2LPU1 Ribonucleotide reductase large subunit n=3 Tax=E... 270 1e-70 UniRef50_Q122S1 Ribonucleoside reductase n=3 Tax=Proteobacteria ... 264 6e-69 UniRef50_D1GPW6 Ribonucleoside-diphosphate reductase n=1 Tax=Sta... 264 7e-69 UniRef50_UPI00004BA6C5 truncated ribonucleoside-diphosphate redu... 264 7e-69 UniRef50_Q0A8L7 Ribonucleoside-diphosphate reductase n=3 Tax=Ect... 260 1e-67 UniRef50_B8GMT3 Ribonucleoside-diphosphate reductase n=3 Tax=Thi... 256 2e-66 UniRef50_A3JKM6 Ribonucleoside reductase n=1 Tax=Marinobacter sp... 246 2e-63 UniRef50_C7LZ05 Ribonucleoside-diphosphate reductase, adenosylco... 240 1e-61 UniRef50_Q91TP4 T45 n=1 Tax=Tupaiid herpesvirus 1 RepID=Q91TP4_T... 236 2e-60 UniRef50_P50641 Ribonucleoside-diphosphate reductase large subun... 233 3e-59 UniRef50_B3UXH6 Ribonucleotide reductase n=7 Tax=Murid herpesvir... 229 4e-58 UniRef50_D0MFS7 Ribonucleoside-diphosphate reductase, adenosylco... 227 1e-57 UniRef50_Q9RRW1 Ribonucleoside-diphosphate reductase n=1 Tax=Dei... 224 1e-56 UniRef50_P52343 Ribonucleoside-diphosphate reductase large subun... 224 1e-56 UniRef50_P16782 Ribonucleoside-diphosphate reductase large subun... 222 4e-56 UniRef50_B7TPW4 GP45 n=1 Tax=Caviid herpesvirus 2 RepID=B7TPW4_9... 214 8e-54 UniRef50_Q39UD5 Ribonucleotide reductase large subunit n=3 Tax=c... 214 1e-53 UniRef50_C9DC34 Gp50 n=2 Tax=root RepID=C9DC34_9CAUD 212 5e-53 UniRef50_O55716 IIV-6 RIR1 intein n=1 Tax=Invertebrate iridescen... 211 8e-53 UniRef50_C1TR30 Ribonucleoside-diphosphate reductase n=1 Tax=Det... 210 1e-52 UniRef50_C9LEN5 Ribonucleoside-diphosphate reductase n=1 Tax=Pre... 207 1e-51 UniRef50_O64240 Putative adenosylcobalamin-dependent ribonucleos... 204 1e-50 UniRef50_Q5SM68 Ribonucleoside-diphosphate reductase n=6 Tax=The... 203 2e-50 UniRef50_Q2S696 Ribonucleoside-diphosphate reductase, alpha chai... 201 1e-49 UniRef50_Q9XD73 Vitamin B12-dependent ribonucleotide reductase (... 200 2e-49 UniRef50_B3QY00 Ribonucleoside-diphosphate reductase, adenosylco... 194 1e-47 UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Ch... 187 1e-45 UniRef50_Q9DWE5 PR45 n=1 Tax=Rat cytomegalovirus Maastricht RepI... 182 3e-44 UniRef50_O55567 P25 n=1 Tax=Leucania separata nuclear polyhedros... 182 6e-44 UniRef50_A6Q367 Probable adenosylcobalamin-dependent ribonucleos... 172 6e-41 UniRef50_Q3B5C1 Ribonucleotide reductase family protein n=9 Tax=... 170 2e-40 UniRef50_A8MLU7 Ribonucleoside-triphosphate reductase, adenosylc... 166 3e-39 UniRef50_Q65357 Putative uncharacterized protein n=1 Tax=Mamestr... 159 5e-37 UniRef50_B9Y435 Putative uncharacterized protein n=1 Tax=Holdema... 157 1e-36 UniRef50_B8YMB4 Ribonucleoside-diphosphate reductase (Fragment) ... 155 4e-36 UniRef50_A7KA98 Putative uncharacterized protein Z838L n=1 Tax=A... 152 7e-35 UniRef50_Q9G0G5 RP ribonucleotide reductase n=6 Tax=root RepID=Q... 145 8e-33 UniRef50_B1ZWW1 ATP-cone domain protein n=2 Tax=Opitutaceae RepI... 143 3e-32 UniRef50_B9R6L5 Ribonucleoside-triphosphate reductase, adenosylc... 142 4e-32 UniRef50_A7XXH5 Ribonucleoside-triphosphate reductase n=2 Tax=un... 139 4e-31 UniRef50_Q035U1 Adenosylcobalamin-dependent ribonucleoside-triph... 135 5e-30 UniRef50_C0Z7W9 Putative uncharacterized protein n=1 Tax=Breviba... 135 5e-30 Sequences not found previously or not previously below threshold: >UniRef50_P00452 Ribonucleoside-diphosphate reductase 1 subunit alpha n=228 Tax=root RepID=RIR1_ECOLI Length = 761 Score = 801 bits (2070), Expect = 0.0, Method: Composition-based stats. Identities = 761/761 (100%), Positives = 761/761 (100%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE 60 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE Sbjct: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE 60 Query: 61 TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL 120 TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL Sbjct: 61 TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL 120 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL Sbjct: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 Query: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT 240 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT Sbjct: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT 240 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG Sbjct: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 Query: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD Sbjct: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 Query: 361 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC 420 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC Sbjct: 361 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC 420 Query: 421 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE 480 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE Sbjct: 421 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE 480 Query: 481 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT Sbjct: 481 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE Sbjct: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE 660 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE Sbjct: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE 660 Query: 661 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT Sbjct: 661 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 Query: 721 AYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 AYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI Sbjct: 721 AYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 >UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Aquifex aeolicus RepID=RIR1_AQUAE Length = 801 Score = 763 bits (1971), Expect = 0.0, Method: Composition-based stats. Identities = 240/821 (29%), Positives = 383/821 (46%), Gaps = 84/821 (10%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETI 62 + V KR G E+++++KI + +A EGL+ V ++E + IQF DGI T +I + + Sbjct: 1 MTMYVIKRSGRKEKLDINKIRIAIKFACEGLN-VDPLELEADAQIQFRDGITTKEIQQLL 59 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKA--------------YGQFEPPALYDHVVK 108 IK AA+ +S + PD+ Y AARL ++ L K Y + Y V + Sbjct: 60 IKTAAEKVSAERPDWTYTAARLLLYDLYKDVAHLRGYSLRDDLGKYKPYNRKNFYSFVKE 119 Query: 109 MVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYES 168 VE G Y +LLE+Y+EE+F ++ +I +RD+ F+Y +K L +YLV++ G + E Sbjct: 120 YVEKGIYGEYLLENYSEEDFNKLANYIKPERDLYFTYTGIKILYDRYLVRDEE-GRVIEL 178 Query: 169 AQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLI 228 Q +Y+L+A L E RL++ K+FYD +S K+++ TP + R P Q SSC ++ Sbjct: 179 PQEMYMLIAMTLAVPEKPEERLKWAKKFYDVLSEHKVTVATPTLMNARRPFTQLSSCFVL 238 Query: 229 ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTA 288 D L I G+G+ G+IRA G+PIR + +G IP K Sbjct: 239 TVDDDLFDIFDNVKKAGMISKFAGGLGVYLGKIRATGAPIRKFKGASSGVIPVVKLINDT 298 Query: 289 VKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLL 348 + Q G+R G+A++ +WH ++ L +K N G E + + V I L RL Sbjct: 299 MTYVDQLGMRKGSASITLDIWHKDILDFLEVKTNVGDERKKAHDIHPAVSIPDLFMKRLK 358 Query: 349 KGEDITLFSPSDVP------------------------------------GLYDAFFADQ 372 ED TL P Sbjct: 359 NREDWTLIDPYWARQYITRKIYDGKYKEVKPLPGSHYYVGIKEDGTQDILEPKGLEDFYG 418 Query: 373 EEFERLYTKYEKD-DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIA 431 EEFE+ Y + E++ S K++V + EL+ ++ TG YI D N +P + Sbjct: 419 EEFEKWYLELEENLPSYAKKKVNSFELWKRLLTVAFETGEPYIFFRDEANRKNP-NKHTG 477 Query: 432 PVRQSNLCLEIALPTKPLND-------------VNDENGEIALCTLSAFNLGAINNLDEL 478 V SNLC EI P E G++ +C L + NLG ++ +E+ Sbjct: 478 MVYSSNLCHEIVQTMSPSKHEKPVLDPETGEITYKKEAGDLPVCNLGSVNLGKVHTEEEI 537 Query: 479 EELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 +E+ L VR LD +++ Y IP A+ R +GIGV N+ Y L K+G ++ Sbjct: 538 KEVLPLLVRMLDNVIEMNFYAIPEAEYTNKRYRAIGIGVSNYHYCLVKNGIKWESEEHLK 597 Query: 539 LTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYD 598 K FE I +Y LK S ELAKE+G F+ + ++KGIL + ++ + + Sbjct: 598 FADKLFELIAFYALKGSLELAKERGRYKLFDGSNWSKGILFGRSVEEIEENSRQNGNNLP 657 Query: 599 WEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPD 658 W L E IK +G+RN+ L ALMP+ ++S I AT I+P + + GIL QV P+ Sbjct: 658 WRELAEEIKKYGIRNAYLLALMPTGSTSLILGATPSIDPIFARFYKEENMSGILPQVPPE 717 Query: 659 YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDL 718 + + Y+ + + + ++ + QK+IDQ+ S N DP + +L + Sbjct: 718 VDRFYWHYKTAYTIDH-EWTIRAAAVRQKWIDQAQSLNLFVDP-----QNIDGPRLSRLY 771 Query: 719 LTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGAC 759 A++ G+KT+YY +R + + CE+ + Sbjct: 772 ELAWELGLKTIYYLRSRSAMDI-----------EECEACSV 801 >UniRef50_C8WWY9 Ribonucleoside-diphosphate reductase n=15 Tax=Firmicutes RepID=C8WWY9_ALIAD Length = 772 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 226/774 (29%), Positives = 367/774 (47%), Gaps = 46/774 (5%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETI 62 + V KRDG E ++LDKI L E ++ Q DG++TS+I Sbjct: 26 KTFTVEKRDGRIEPLSLDKIFAFLKRGCEAAEGCDPERLAADVWPQLRDGMRTSEIARVA 85 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKA-----YGQFEPPALYDHVVKMVEMGKYDN 117 I+AA + S P +Q++AARL +F K+A Y Y +V++ +G+Y Sbjct: 86 IQAAVEKTSVAEPGWQFVAARLLLFDAYKQASRNRGYRHLGYGDFYQLIVELERIGRYGT 145 Query: 118 HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 ++ + Y+E+E ++ +I +RD F+Y +KQL +Y ++N G I E Q L++ V+ Sbjct: 146 YIRQHYSEDEIAELAAYIKPERDYLFNYVGLKQLLDRYAIRNLDNG-IMELPQELFMGVS 204 Query: 178 ACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI 237 L + ++ + KRFYD +ST + ++ TP +S R P Q SSC + D L SI Sbjct: 205 MHLAMKE--KDKVAWAKRFYDMLSTLQATVATPTLSNARKPFHQLSSCFIDMPEDDLVSI 262 Query: 238 NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV 297 AT A + G+GI G+IRA GS IR G +P+ ++F SC+Q G+ Sbjct: 263 YATDEAFARVSKFGGGMGIYVGKIRARGSAIRNHPGASGGVVPWIRNFNNTAVSCNQLGM 322 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R GAA ++ +WH ++ L L+ N G E + + GV I L R+ + LF Sbjct: 323 RAGAAAVYLDVWHKDILDFLQLRTNNGDERMKAHDIFPGVCIPDLFMRRVEERGMWYLFC 382 Query: 358 PSDVPGLYDAFFAD--QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQ 415 P +V + D EEFER Y ++ ++ + + A+E+ +MQ TG +I Sbjct: 383 PYEVRKVMGFSLEDSWGEEFERRYEACVENPNLPRVEIPAIEIMKRIMQSAFETGTPFIF 442 Query: 416 NVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND-----------ENGEIALCTL 464 D N +P + V SNLC EI P + + E G+ +C L Sbjct: 443 FRDTANRLNP-NKHAGMVYCSNLCTEIIQNMSPSRRIEETEEGGIITMKTEAGDFVVCNL 501 Query: 465 SAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYL 524 S+ NLG +LD + E+ +RA+D ++D YP+P A R +G+GV + YL Sbjct: 502 SSLNLGRCRDLDSIREIVRRQIRAMDNVIDLNHYPVPQAAVTNRKYRAVGLGVSGYHQYL 561 Query: 525 AKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYK 584 A+ G + + + FE I ++ ++AS ELA+E+G P F + + G Sbjct: 562 AEKGIPWESEAHVKHADELFEWINFFAIEASMELAREKGPYPLFEGSDWQTGRYF----- 616 Query: 585 KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSI 644 DL P DW+ LR + HG+RN+ L A+ P+ ++S I+ +T GI+P + Sbjct: 617 -DLRGYRTRPGGPDWDGLRREVAEHGVRNAYLVAIAPTSSTSLIAGSTAGIDPVYARFFL 675 Query: 645 KASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRF 704 + K+G++ Q P+ Y ++ Q+ +DQS S N P Sbjct: 676 EEKKNGVVPQTAPNLNDKTFWYYKEAHTIDQRWSIEACAARQRHVDQSQSFNLYITPG-- 733 Query: 705 PSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 + +Q L L A+K G+KT+YY ++ S++ + C + + Sbjct: 734 ----ISARQFLDLYLLAWKRGLKTVYYVRSK------------SVEVEDCVACS 771 >UniRef50_P48591 Ribonucleoside-diphosphate reductase large subunit n=94 Tax=root RepID=RIR1_DROME Length = 812 Score = 754 bits (1947), Expect = 0.0, Method: Composition-based stats. Identities = 213/793 (26%), Positives = 341/793 (43%), Gaps = 81/793 (10%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQ--VELRSHIQFYDGIKTSDIH 59 L V KRDG E ++ DKI + L+ + + L+ Y G+ T ++ Sbjct: 9 TSKLYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELD 68 Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEP--PALYDHVVKMVEMGK-YD 116 + AA L + PDY LAAR+A+ +L K+ F LY+HV K Sbjct: 69 NLAAEIAAGLTC-NHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLV 127 Query: 117 NHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV 176 + + ++ ++++ I +DRD ++Y K LE YL++ G+I E Q + + V Sbjct: 128 SEFHYNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKR--NGKIAERPQHMLMRV 185 Query: 177 AACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLD 235 A + + Y+ +S + +P + T Q SSC L+ DS++ Sbjct: 186 AIGIHG-----EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIE 240 Query: 236 SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQG 295 I + GIG+N IRA G+ I G G +P + F + QG Sbjct: 241 GIFKSVEQCAMISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQG 300 Query: 296 G-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDIT 354 G R GA ++ WH +V L LK N G E NR R + Y + I L R+ D + Sbjct: 301 GGKRPGAFAIYLEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWS 360 Query: 355 LFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYI 414 L P PGL+D + +EFE+LY KYE++ + VKA L+ +++ + TG Y+ Sbjct: 361 LMCPHKCPGLHDVW---GDEFEKLYEKYEQEGR-ANRTVKAQSLWFAIIEAQVETGNPYM 416 Query: 415 QNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN- 473 D CN S + ++ SNLC EI + P EIA+C L++ L Sbjct: 417 LFKDACNRKSNQQ-NVGTIKCSNLCTEIVEYSAP--------DEIAVCNLASIALNMFVT 467 Query: 474 -----NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHG 528 + +L+E+ + + L+ ++D YP+P A++ + R +GIG+ FA L Sbjct: 468 PEKTYDFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMR 527 Query: 529 KRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLD 588 Y A L + FE I Y L+AS ELA+ +G + + +KGIL D + K Sbjct: 528 FPYESEEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPT 587 Query: 589 TIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 + +DW+ L+ESI+ HG+RNS L A MP+ +++QI EP + + Sbjct: 588 NL------WDWQKLKESIRMHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVL 641 Query: 649 DGILRQVVP--------------------------------DYEHLHDAYELLWEMPGND 676 G + V + D Y+ +WE+ Sbjct: 642 SGEFQVVNHHLLRDLTELDLWDDDMKNQIISSRGSIQNIETIPPKVRDLYKTVWEIS-VK 700 Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTR 735 +++ FIDQS S N + + +L ++K G+KT +YY T+ Sbjct: 701 STIKMAADRGAFIDQSQSFNIHVAEPNY-------GKLTSIHFYSWKAGLKTGMYYLRTK 753 Query: 736 DGAEDAQDDLVPS 748 A Q + Sbjct: 754 PAANAIQFTVNKK 766 >UniRef50_P23921 Ribonucleoside-diphosphate reductase large subunit n=248 Tax=root RepID=RIR1_HUMAN Length = 792 Score = 754 bits (1946), Expect = 0.0, Method: Composition-based stats. Identities = 212/791 (26%), Positives = 340/791 (42%), Gaps = 81/791 (10%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHETI 62 + V KRDG ER+ DKI + GL+ V +Q+ ++ Y G+ T ++ +T+ Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVEL-DTL 59 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE- 121 A ++ PDY LAAR+A+ +L K+ F + GK+ + + Sbjct: 60 AAETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKS 119 Query: 122 --DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 D ++++ I +DRD +++Y K LE YL++ + G++ E Q + + V+ Sbjct: 120 TLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLK--INGKVAERPQHMLMRVSVG 177 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSIN 238 + + + Y+ +S + +P + T Q SSC L+ DS++ I Sbjct: 178 IH-----KEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIY 232 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-V 297 T GIG+ IRA GS I G G +P + + + QGG Sbjct: 233 DTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNK 292 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R GA ++ WHL++ L LK N G E R R + + + I L R+ +D +L Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352 Query: 358 PSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417 P++ PGL + + EEFE+LY YEK +R + VKA +L+ +++ + TG Y+ Sbjct: 353 PNECPGLDEVW---GEEFEKLYASYEKQGRVR-KVVKAQQLWYAIIESQTETGTPYMLYK 408 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN---- 473 D CN S + ++ SNLC EI T E+A+C L++ L Sbjct: 409 DSCNRKSNQQ-NLGTIKCSNLCTEIVEYTSK--------DEVAVCNLASLALNMYVTSEH 459 Query: 474 --NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRY 531 + +L E+ + VR L+ ++D YP+P A R +GIGV A + Sbjct: 460 TYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPF 519 Query: 532 SDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA 591 A L + FE I Y L+AS +LAKEQG + + +KGIL D + + Sbjct: 520 ESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDL- 578 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI 651 +DW+ L+E I +G+RNS L A MP+ +++QI IEP + + G Sbjct: 579 -----WDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGE 633 Query: 652 LRQVVP--------------------------------DYEHLHDAYELLWEMPGNDGYL 679 + V P + L Y+ +WE+ L Sbjct: 634 FQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEIS-QKTVL 692 Query: 680 QLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGA 738 ++ FIDQS S N + + +L +K G+KT +YY TR A Sbjct: 693 KMAAERGAFIDQSQSLNIHIAEPNY-------GKLTSMHFYGWKQGLKTGMYYLRTRPAA 745 Query: 739 EDAQDDLVPSI 749 Q L Sbjct: 746 NPIQFTLNKEK 756 >UniRef50_C1FEX6 Ribonucleoside-diphosphate reductase n=4 Tax=Chlorophyta RepID=C1FEX6_9CHLO Length = 841 Score = 753 bits (1944), Expect = 0.0, Method: Composition-based stats. Identities = 224/819 (27%), Positives = 337/819 (41%), Gaps = 100/819 (12%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHETI 62 + V KRDG E ++ DKI ++ A GL+ V + + Y G+ TS++ E Sbjct: 3 MYVVKRDGRQEPVHFDKITARINKLAYGLNQEFCDPVLVAQKVAVGVYKGVTTSELDELA 62 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLED 122 + AA + S+ PDY LAAR+A+ +L K F + GK+ L +D Sbjct: 63 AETAASMTSK-HPDYAQLAARIAVSNLHKNTLKSFSETMKVMYEHVNKRNGKWSPLLADD 121 Query: 123 YTE---EEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 E E + D+ I +DRD + Y K LE YL++ V G+I E Q L + VA Sbjct: 122 VYEIIKENADRFDSEIVYDRDFDYDYFGYKTLERSYLLR--VDGKIVERPQHLLMRVAIG 179 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSIN 238 + ++ Y +S ++ +P + TP Q SSC LI DS++ I Sbjct: 180 IH------KDVEKAIDTYHMLSERWMTHASPTLFNSGTPRPQLSSCFLIAMKEDSIEGIY 233 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-V 297 T GIG++ IRA S IRG G IP + F + QGG Sbjct: 234 DTLKECACISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGK 293 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R GA ++ WH ++ L L+ N G E R R + YG+ N L R+ + TLF Sbjct: 294 RKGAFAIYLEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMKRVEANGEWTLFC 353 Query: 358 PSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417 P++ PGL D + EEFE LY KYE + K+ VKA +L+ +++ + TG Y+ Sbjct: 354 PNEAPGLADCW---GEEFEALYEKYEAEGKG-KKTVKAQQLWFAILESQVETGNPYMLFK 409 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----- 472 D CN S + +R SNLC EI T P E A+C L++ L Sbjct: 410 DACNRKSNQQ-NLGTIRSSNLCTEIVEYTSPE--------ETAVCNLASIALPRFVIENN 460 Query: 473 -----------------------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMG 509 + D+L E+ R L+ ++D YP+ A+R M Sbjct: 461 PQSPTGRTEAKKLRGSIGAANRYFDHDKLAEITRKVTRNLNRIIDVNYYPVETARRSNMK 520 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 R +G+GV A G + A L + FE I + L SN++AK G + Sbjct: 521 HRPIGLGVQGLADVFILLGMPFDSPEAKKLNAEIFETIYFAALTESNDIAKRDGTYESYP 580 Query: 570 ETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS 629 + + G+L D + +DW LR I HG+RNS L A MP+ ++SQI Sbjct: 581 GSPVSNGVLQPDMWGLTE---MPGGDRHDWTGLRTKISEHGVRNSLLVAPMPTASTSQIL 637 Query: 630 NATNGIEPPRGYVSIKASKDGILRQVVP-------------------------------D 658 EP + + G V Sbjct: 638 GNNECFEPYTSNIYARRVLSGEFTVVNQHLLSDLTEMGLWDPSLKNELIANNGSVQSLDI 697 Query: 659 YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDL 718 ++L + Y+ +WE+ + + FIDQS S N + +L Sbjct: 698 PDNLKEIYKTVWEIK-QRILVDMAADRGAFIDQSQSFNVHM-------SDANSGKLTSLH 749 Query: 719 LTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDDGCES 756 A+K G+KT +YY +R A+ + + P+ S Sbjct: 750 FYAWKKGLKTGMYYLRSRAAADAVKFTVDPNSVKAKNAS 788 >UniRef50_A8P6Y3 Ribonucleoside-diphosphate reductase n=1 Tax=Brugia malayi RepID=A8P6Y3_BRUMA Length = 1061 Score = 749 bits (1934), Expect = 0.0, Method: Composition-based stats. Identities = 214/802 (26%), Positives = 344/802 (42%), Gaps = 90/802 (11%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGL--HNVSISQVELRSHIQFYDGIKTSDIH 59 N V KRDG E ++ DKI R + GL V ++ + Y G+ T ++ Sbjct: 8 TSNSYVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELD 67 Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHL 119 + AAD+I++ PDY LA+R+ + +L KK F + + + G++ + Sbjct: 68 NLAAEIAADMITK-HPDYATLASRITVSNLHKKTEKSFSKLSRRLYNATHPKSGRHMPLI 126 Query: 120 ---LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV 176 L D + +D+ I H+RD ++Y +K LE YL+ ++ GE+ E Q + + V Sbjct: 127 SKELFDIIQNNANLLDSAIVHERDYLYTYFGLKTLERSYLL--QINGELAERPQHMLMRV 184 Query: 177 AACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLD 235 A + ++ Y+ +S + TP + T T Q SSC L+ DS++ Sbjct: 185 ALGIHG-----EDIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFEDSIE 239 Query: 236 SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQG 295 I T GIG+N IRA GS I G G +P + F A + QG Sbjct: 240 GIFETLKKCALISKSAGGIGLNVHCIRASGSAIAGTNGVSNGLVPMLRVFNNAARYVDQG 299 Query: 296 G-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDIT 354 G R GA ++ WH ++ L L+ N G E R R + +G+ + L R+ + + Sbjct: 300 GNKRPGAFAVYLEPWHADIFDFLELRKNVGDELERCRDLFFGLWVPDLFMERVRDDKIWS 359 Query: 355 LFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYI 414 L P++ PGL D++ E FE+LYT+YE++ R ++V A +L+ ++ + TG Y+ Sbjct: 360 LMCPAECPGLEDSW---GEAFEKLYTQYEEEGRYR-KQVPARKLWETIVFTQIETGMPYM 415 Query: 415 QNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN- 473 D CN + + ++ SNLC E+ L + EIA+C L++ LG Sbjct: 416 VYKDTCNRKTNQQ-NLGTIKCSNLCTEVVLYSS--------REEIAVCNLASIALGRFVT 466 Query: 474 -----NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHG 528 + L E+ + V+ L+ ++D YPIP A+R R +GIGV A Sbjct: 467 SEMKYDFKMLHEVTKVVVKNLNKVIDRNYYPIPEAERSNKRHRPIGIGVQGLADAFILMR 526 Query: 529 KRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLD 588 ++ A +L + FE I Y L+AS +LAKEQG + + +KGIL D + Sbjct: 527 YPFTSEKARDLNKRIFETIYYAALEASCDLAKEQGPYESYEGSPISKGILQFDMWGVTP- 585 Query: 589 TIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 DW LRE I G+RNS L + MP+ +++QI IEP V + Sbjct: 586 -----TDQCDWGTLREKIAKFGIRNSVLLSPMPTASTAQILGNNESIEPYTSNVYTRNVL 640 Query: 649 DGILRQ--------------------------------VVPDYEHLHDAYELLWEMPGND 676 G + + + + D Y +WEM D Sbjct: 641 SGSFQIFNMHLMNDLMHLDLWDDDMKLEIIKNKGSIQNIERIPQEIRDLYRTVWEMSQRD 700 Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYK---------FGVK 727 + + FIDQS S N + + + ++ G+K Sbjct: 701 -IIDMAADRGAFIDQSQSLNIFIARPNYGN-------ITSMHFYGWQKVCTAFLMYKGLK 752 Query: 728 T-LYYQNTRDGAEDAQDDLVPS 748 T +YY TR + Q + + Sbjct: 753 TGMYYLRTRPAVDAVQFTVDKT 774 >UniRef50_C5LWW8 Ribonucleoside-diphosphate reductase n=4 Tax=Eukaryota RepID=C5LWW8_9ALVE Length = 1504 Score = 745 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 216/791 (27%), Positives = 333/791 (42%), Gaps = 78/791 (9%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHETI 62 + V KR+G + DKI + + GL+ V ++Q+ + Y G+ T+++ Sbjct: 3 MYVIKRNGQKADVQFDKITKRIRPLTRGLNEDYVDVTQITQKVAEGIYPGVTTTELDSLA 62 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFE--PPALYDHVVKMVEMGKYDNHLL 120 + A + S+ PD+ LAAR+A+ +L K + F LY+ + + Sbjct: 63 AETCAYM-SQVHPDFSTLAARIAVSNLHKNTHESFSETITELYNITDSRGRSSPLVSEEV 121 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 + + ++D ID+DRD + Y K LE YL++ E Q + + VA + Sbjct: 122 YNIVKMNADKLDKAIDYDRDFDYDYFGFKTLERSYLLKRPSDKTCIERPQHMIMRVAVGI 181 Query: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSINA 239 + Y +ST + TP + TP Q SSC L+ DS++ I Sbjct: 182 HG-----DDVDAAIETYALMSTRVFTHATPTLFNSGTPHPQMSSCFLLSIKEDSIEGIYD 236 Query: 240 TSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VR 298 T GIG+ IRA S IRG F G +P + F + QGG R Sbjct: 237 TLKQCAMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFNDTARYVDQGGGKR 296 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 G+ ++ WH +V L LK N G E +R R + Y + I L R++ D TLF P Sbjct: 297 KGSFAVYLEPWHADVFEFLDLKKNHGKEEHRARDLFYALWIPDLFMKRVMANGDWTLFCP 356 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 ++ PGL D + EEFE LY KYEKD I ++ VKA L+ +++ + TG Y+ D Sbjct: 357 NEAPGLQDTY---GEEFEALYEKYEKDG-IGRKTVKAQSLWFKILESQQETGIPYMLYKD 412 Query: 419 HCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN---- 474 N S + +R SNLC EI T + E+A+C L++ L + Sbjct: 413 SANRKSN-QKNLGTIRCSNLCCEIIEYTS--------SDEVAVCNLASIALNMFVDKKTR 463 Query: 475 ---LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRY 531 D L +A + + L+ ++D YP+P A++ M R +GIGV A Y Sbjct: 464 TYDFDRLHRVAKVVTKNLNKVIDRNYYPVPEARKSNMRHRPIGIGVQGLADAFLLMRYPY 523 Query: 532 SDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA 591 A L + FE I + +AS ELAK G F + ++GIL D + D+ Sbjct: 524 ESPEALKLNNDIFETIYHAACEASMELAKRDGPYETFQGSPASEGILQFDMWDVIPDSG- 582 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI 651 +DW +L+E IK +G+RNS L A MP+ +++QI EP + ++ G Sbjct: 583 ----RWDWASLKEEIKKNGMRNSLLIAPMPTASTAQILGNNEAFEPYTQNIYVRRVLAGE 638 Query: 652 LRQVVP--------------------------------DYEHLHDAYELLWEMPGNDGYL 679 QV + D Y+ +WE+ L Sbjct: 639 FVQVNRHLVDDLMELGLWNDEIKDKIIRKKGSVQGVEEIPSEIQDLYKTVWEIK-QKKIL 697 Query: 680 QLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL-YYQNTRDGA 738 + +IDQS S N + +L +K G+KT YY T+ A Sbjct: 698 DMAAGRGPYIDQSQSLNIHM-------TNCTNAKLSSMHFYGWKLGLKTGQYYLRTKAAA 750 Query: 739 EDAQDDLVPSI 749 + Q L Sbjct: 751 DAIQFTLDAKK 761 >UniRef50_Q8K9W3 Ribonucleoside-diphosphate reductase subunit alpha n=180 Tax=root RepID=RIR1_BUCAP Length = 763 Score = 735 bits (1897), Expect = 0.0, Method: Composition-based stats. Identities = 560/763 (73%), Positives = 668/763 (87%), Gaps = 2/763 (0%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE 60 M +L VTKR+G E+INLDKIH+VL+WAA+GL N+S+SQVELRS IQFY+ I T +IHE Sbjct: 1 MKNSLFVTKRNGKKEKINLDKIHKVLNWAAKGLENISVSQVELRSRIQFYNNISTVNIHE 60 Query: 61 TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL 120 TIIKAAADLIS + PDYQY+AARLAIFHLRKKAYGQFEPP LY HV KMV++GKYD LL Sbjct: 61 TIIKAAADLISENTPDYQYMAARLAIFHLRKKAYGQFEPPNLYYHVKKMVQLGKYDEKLL 120 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 ++Y+ EE+ +M++F+DH RDM FSYAAVKQLE KYL+QNRVTG+IYESAQFLYIL++ACL Sbjct: 121 QNYSFEEYVEMNSFVDHRRDMNFSYAAVKQLEAKYLLQNRVTGQIYESAQFLYILISACL 180 Query: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT 240 FS Y ++ R+ Y++RFY+A+STFKISLPTPIMSGVRTPTRQFSSCVLIEC D+L+SINAT Sbjct: 181 FSKYEKKVRMNYIQRFYNAISTFKISLPTPIMSGVRTPTRQFSSCVLIECADNLNSINAT 240 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 +SAIVKYVSQRAGIGINAG+IRALGSPIR GEAFHTGCIPFYKHFQ+AVKSCSQGGVRGG Sbjct: 241 TSAIVKYVSQRAGIGINAGQIRALGSPIRNGEAFHTGCIPFYKHFQSAVKSCSQGGVRGG 300 Query: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 AAT+FYP+WHLE+ESLLVLKNNRG+E NRVRH+DY VQINKLMY R+L G+ ITLFSPSD Sbjct: 301 AATVFYPIWHLEIESLLVLKNNRGIEENRVRHLDYAVQINKLMYQRMLLGQKITLFSPSD 360 Query: 361 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC 420 VP LY+ FF+DQ++F+ +Y KYEK+ +IRK+ + A++LF L+M+ERASTGRIYIQ+VDHC Sbjct: 361 VPKLYEFFFSDQKKFKEIYIKYEKNRNIRKKSINAIDLFCLIMRERASTGRIYIQHVDHC 420 Query: 421 NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEE 480 N+HS F+ +A +RQSNLCLEI LPTKPLN+++D+NGEIALCTLSA NLG IN+L +L+E Sbjct: 421 NSHSAFNSKLATIRQSNLCLEITLPTKPLNNIDDKNGEIALCTLSALNLGLINDLHDLKE 480 Query: 481 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 L+ L+VRALD +L+YQ+YP+ AK+ A+ RR+LGIGVINFAYYLAK+ RYSDGSA NLT Sbjct: 481 LSTLSVRALDEILEYQNYPVVCAKKSAISRRSLGIGVINFAYYLAKNKVRYSDGSAKNLT 540 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 HKTFEAIQYYLLKAS ELAKE+G+C FN+T Y G PIDTYKKD+D+I NEPLH +W Sbjct: 541 HKTFEAIQYYLLKASCELAKEKGSCSLFNQTNYYLGKFPIDTYKKDIDSICNEPLHLNWN 600 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE 660 LR+ IK +GLRNSTLSALMPSETSSQISNATNGIEPPRG++SIK+SKDG+LRQVVP+Y+ Sbjct: 601 LLRKKIKKYGLRNSTLSALMPSETSSQISNATNGIEPPRGFISIKSSKDGMLRQVVPEYK 660 Query: 661 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 L YELLWE+P N GYL+LV IMQKF+DQSISANTNYDP RF + K+PM+QL+ DLL Sbjct: 661 KLKSEYELLWEIPNNIGYLELVAIMQKFVDQSISANTNYDPKRFLNEKIPMKQLIYDLLV 720 Query: 721 AYKFGVKTLYYQNTRDGAEDAQDDLVP--SIQDDGCESGACKI 761 AYK G+KTLYYQNTRDGAED Q+ +I++D C SG+C I Sbjct: 721 AYKLGIKTLYYQNTRDGAEDNQNLNKSIENIKEDNCTSGSCTI 763 >UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URA6_9AQUI Length = 767 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 225/787 (28%), Positives = 372/787 (47%), Gaps = 52/787 (6%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + V KR G E+++++KI L++A +GL+ V ++E + IQF DGI T +I +I+ Sbjct: 1 MEVVKRSGKREQLDINKIRIALEFAFKGLN-VDPLELETDAQIQFRDGITTEEIQAVLIR 59 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKA---------------YGQFEPPALYDHVVKM 109 AA+ +S + PD+Q+ AARL ++ L KK Y + Y+ + + Sbjct: 60 TAAEKVSPETPDWQFAAARLLLYDLYKKVAHIRGYEVRDELSKDYKPYNTEGFYEFINRF 119 Query: 110 VEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESA 169 V G Y ++LL+ Y+E + + + I +RD+ F+Y +K L +YL ++ G I E Sbjct: 120 VGEGIYGDYLLKHYSESDIRDLAKHIKPERDLYFNYTGIKILTDRYLARDED-GRIIELP 178 Query: 170 QFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE 229 Q +Y+L++ L R+++ K FYD +S I++ TP + R P Q SSC ++ Sbjct: 179 QEMYMLISMTLAIPEKEGDRVKWAKEFYDLLSEHLITVATPTLMNARRPFTQLSSCFILT 238 Query: 230 CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAV 289 D L I + G+GI G++RA G+PIR + +G IP K + Sbjct: 239 VDDDLYDIFDNVQKAAQISKHAGGLGIYIGKLRATGAPIRKFKGASSGIIPVVKVINDVM 298 Query: 290 KSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLK 349 Q G+R G+A++ +WH ++ L +K N G E + + + I L R+ Sbjct: 299 TYVDQLGMRKGSASITLDIWHKDILDFLEVKTNAGDERKKAHDIHPAISIPDLFMKRVKN 358 Query: 350 GEDITLFSPSDVPGLYDAFFAD---QEEFERLYTKYEKD-DSIRKQRVKAVELFSLMMQE 405 E TL P + D + E FE Y + EK+ K+ V A EL+ ++ Sbjct: 359 REKWTLLDPYYTKNVRDGKNLEDLWGEAFEEEYERLEKELPEDAKKEVDAFELWKRLLTV 418 Query: 406 RASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDE---------- 455 TG Y+ DH N +P + V SNLC EI P + E Sbjct: 419 AFETGEPYLFFRDHANRINP-NKHAGMVYSSNLCHEIVQNMSPTKHLGKELDPETGEIVH 477 Query: 456 ---NGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRT 512 +G++ +C L + NLG + + +E++ VR LD +++ Y IP A+ R Sbjct: 478 RKKSGDVVVCNLGSVNLGKVYTKETMEQVVPKLVRLLDNVIEMNYYAIPEAEYTNKRYRA 537 Query: 513 LGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETT 572 +GIGV N+ Y L K+G + K FE + +Y +K S ELAKE+G F + Sbjct: 538 IGIGVSNYHYCLVKNGVNWESEDHLKFADKLFELLGFYAIKGSMELAKERGKYRLFEGSD 597 Query: 573 YAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNAT 632 +++GI ++ + W+ L E ++ +G+RNS L ALMP+ ++S I AT Sbjct: 598 WSRGIFFGRKAEELEENSKENGNDLPWKDLAEDVRENGIRNSYLLALMPTGSTSLILGAT 657 Query: 633 NGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQS 692 ++P + + GIL QV P+ + Y+ + + + ++ + QK+IDQ+ Sbjct: 658 PSVDPIFAKYYKEENMSGILPQVPPEIDRFFWHYKSAYNID-QEWVVRAAAVRQKWIDQA 716 Query: 693 ISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDD 752 S N DP K+ L K A++ G+KT+YY ++ + + Sbjct: 717 QSLNLFIDP-----EKIDGPTLSKIYQLAWELGLKTIYYLRSKSITDI-----------E 760 Query: 753 GCESGAC 759 CES A Sbjct: 761 ECESCAV 767 >UniRef50_D1CID8 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=D1CID8_THET1 Length = 819 Score = 729 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 199/795 (25%), Positives = 325/795 (40%), Gaps = 70/795 (8%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHET 61 Q + V +G ++ D++ R L A GL ++ YD + I Sbjct: 10 TQRVRVVSPEGGLVPLDPDRVRRHLQHACRGLPECDPDELANEVVRSLYDRVTPEQIRSA 69 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYG-----QFEPPALYDHVVKMVEMGKYD 116 +I AA I RD P Y +A+RL + + ++++G + + V Sbjct: 70 MILAARARIERD-PAYDKVASRLMLEQIYQESWGWVPSEAELAATYREMFPRYVHACISA 128 Query: 117 NHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV 176 L E+ + ++ + + +RD Y ++ L +YL+ G E+ Q+ ++ V Sbjct: 129 GRLSEELARFDLARLASALRPERDEKLRYIGLQTLYDRYLLDVE--GRRLEAPQYFWMRV 186 Query: 177 AACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDS 236 A L +FYD +S+ + TP + TP Q SSC L D L+ Sbjct: 187 AMGLALREDDPN--ARAAQFYDLLSSLRFVSATPTLFNSGTPHPQLSSCYLSTVEDDLEH 244 Query: 237 INATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG 296 I K G+G + R+RA G+ IRG G IPF K + +QGG Sbjct: 245 IFKVIGDNAKLSKWAGGLGNDWTRVRATGALIRGTHGKSQGVIPFLKIVNDTAVAVNQGG 304 Query: 297 VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLF 356 R GA + WHL+ E L L+ N G E R M + L R+ +G TLF Sbjct: 305 KRKGAVCCYLEPWHLDFEEFLELRKNTGDERRRTHDMHTASWVPDLFMRRVQEGGTWTLF 364 Query: 357 SPSDVPGLYDAFFADQEEFERLYTKYEKDDSIR-KQRVKAVELFSLMMQERASTGRIYIQ 415 SP++VP L++ + E Y + ++ +R +RV A L+ M+ TG +I Sbjct: 365 SPNEVPDLHELYGRAFERRYVEYERMAEEGKLRQHKRVDAKMLWRKMLSMLWETGHPWIA 424 Query: 416 NVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI--- 472 D N S + + SNLC EI LPT E A+C L + NL Sbjct: 425 FKDPSNIRSA-QDHVGVIHSSNLCTEILLPTS--------REETAVCNLGSINLVEHLSG 475 Query: 473 --NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530 + +L E AVR LD ++D YP P A+R + R +G+G++ F L Sbjct: 476 DGLDEAKLAETVRTAVRMLDNVIDINFYPTPEARRSNLRHRPIGLGIMGFHDALLALRIP 535 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDT-----YKK 585 Y+ A + +T E I ++ + AS+ELA E+G P + + +++G+LPIDT ++ Sbjct: 536 YASPQAVEFSDQTMELISWHAIMASSELAAERGRYPSYQGSKWSRGLLPIDTIELLERER 595 Query: 586 DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIK 645 D + DW +RE++ G+RNS + A+ P+ T S I+ + IEP + +K Sbjct: 596 GGDLEMDRTARLDWGPVREAVARWGVRNSQIMAIAPTATISNIAGVSQSIEPHYRNLFVK 655 Query: 646 ASKDGILRQVVPD--------------------------------YEHLHDAYELLWEMP 673 ++ G V P + + Y E+ Sbjct: 656 SNLSGDFTIVNPYLVEDLKRLGLWSQEMLDRIKYYDGSILPIEEIPDEVKHLYLTAHEID 715 Query: 674 GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQN 733 ++ QK++D S N ++L + A++ G+KT YY Sbjct: 716 -PLWLIECASRRQKWVDMGQSLNIYVAEP-------SGKKLHEIYFAAWRKGLKTTYYLR 767 Query: 734 TRDGAEDAQDDLVPS 748 + + + Sbjct: 768 AVGATNVEKASMDIN 782 >UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alpha n=54 Tax=Epsilonproteobacteria RepID=RIR1_HELPJ Length = 788 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 205/803 (25%), Positives = 357/803 (44%), Gaps = 68/803 (8%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + V KR+G E +++ KI + A + L VS S++E+ + +QF D I T +I +T+IK Sbjct: 2 ITVVKRNGRIEPLDITKIQKYTKDATDNLEGVSQSELEVDARLQFRDKITTEEIQQTLIK 61 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYT 124 A D I D P++ ++A+RL ++ L K G L ++ E G+ E + Sbjct: 62 TAVDKIDIDTPNWSFVASRLFLYDLYHKVSGFTGYRHLKEYFENAEEKGRILKGFKEKF- 120 Query: 125 EEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY 184 + + +++ I +RD F+Y +K L +YL+++ E Q +++ +A L N Sbjct: 121 --DLEFLNSQIKPERDFQFNYLGIKTLYDRYLLKD-ANNHPIELPQHMFMSIAMFLAQNE 177 Query: 185 PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAI 244 ++ FY+ +S F+ TP ++ RT Q SSC + D+++ I + + Sbjct: 178 QELNKI--ALEFYEVLSKFEAMCATPTLANARTTKHQLSSCYIGSTPDNIEGIFDSYKEM 235 Query: 245 VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL 304 GIG + +R++GS I G + G IPF K + Q G R GA + Sbjct: 236 ALLSKYGGGIGWDFSLVRSIGSYIDGHKNASAGTIPFLKIANDVAIAVDQLGTRKGAIAV 295 Query: 305 FYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGL 364 + +WH++V + L+ N G E R + + + L R+L+ TLF P + L Sbjct: 296 YLEIWHIDVMEFIDLRKNSGDERRRAHDLFPALWVCDLFMKRVLEDAMWTLFDPYECKDL 355 Query: 365 YDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS 424 + + D FE+ Y +YEKD I K+ + A +L+ ++ G ++ D+ N + Sbjct: 356 TELYGQD---FEKRYLEYEKDPKIIKEYINAKDLWKKILMNYFEAGLPFLAFKDNANRCN 412 Query: 425 PFDPAIAPVRQSNLCLEIALPTKPLNDV-------------------------------- 452 P + +R SNLC EI T P + Sbjct: 413 P-NAHAGIIRSSNLCTEIFQNTAPNHYYMQIEYTDGAIEFFEEKELVTTDSNITKCANKL 471 Query: 453 ----------------NDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQ 496 ++G+ A+C L++ NL IN ++++ + + VR LD ++D Sbjct: 472 TSTDILKGKKIYIATKVAKDGQTAVCNLASINLSKINTEEDIKRVVPIMVRLLDNVIDLN 531 Query: 497 DYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASN 556 YP K + R +G+GV+ A LA+H + E I Y+ + S Sbjct: 532 FYPNRKVKATNLQNRAIGLGVMGEAQMLAEHQIAWGSKEHLEKIDALMEQISYHAIDTSA 591 Query: 557 ELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPL---HYDWEALRESIKTHGLRN 613 LAKE+G F + ++KGI PID + + + L DW+ LRE +K +G+RN Sbjct: 592 NLAKEKGVYKDFENSEWSKGIFPIDKANNEALKLTEKGLFNHACDWQGLREKVKANGMRN 651 Query: 614 STLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYEL-LWEM 672 L A+ P+ + S + T IEP + + G++ VVP+ + +++ Sbjct: 652 GYLMAIAPTSSISILVGTTQTIEPIYKKKWFEENLSGLIPVVVPNLNVETWNFYTSAYDI 711 Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQ 732 D ++ + QK+IDQ S N + L + A+K G+K+ YY Sbjct: 712 DAKD-LIKAAAVRQKWIDQGQSINVFL-----RIENASGKTLHEIYTLAWKLGLKSTYYL 765 Query: 733 NTRDGAEDAQDDLVPSIQDDGCE 755 + + D + L S++ C+ Sbjct: 766 RSESPSIDEKSVLDRSVECFNCQ 788 >UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=cellular organisms RepID=B4E5V9_BURCJ Length = 1003 Score = 713 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 212/795 (26%), Positives = 338/795 (42%), Gaps = 77/795 (9%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHN-VSISQVELRSHIQFYDGIKTSDIHETII 63 + V +G T ++L+ + ++ A +GL V+ + + YDG+ S ++++ I Sbjct: 158 INVVD-NGVTRPLDLNALRALIVSACDGLGAAVNPDPIVAETVKNLYDGVPMSQVYDSAI 216 Query: 64 KAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPA-----LYDHVVKMVEMGKYDNH 118 AA +I +D P Y + AR+ + +R++ G+ A ++ + ++ G Sbjct: 217 LAARTMIEKD-PAYSQVTARILLHTIRREILGEEVVQAEMSTRYAEYFPQFLKRGVDAGL 275 Query: 119 LLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 L + + + K++ +D +RD+ F Y ++ L +Y + V G E Q ++ VA Sbjct: 276 LDDKLLQFDLKRLGEALDANRDLQFGYLGLQTLYDRYFL--HVDGTRIEMPQAFFMRVAM 333 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSIN 238 L N R FY+ +S+F TP + T Q SSC L D LD I Sbjct: 334 GLSLNE--IDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADDLDGIY 391 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVR 298 G+G + R+RALGS I+G G +PF K + +QGG R Sbjct: 392 EALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKR 451 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 GA + WHL++E L L+ N G + R M+ I L R+++G D TLFSP Sbjct: 452 KGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSP 511 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIR-KQRVKAVELFSLMMQERASTGRIYIQNV 417 S P L+D F AD E+ Y I+ +++ A +L+ M+ TG +I Sbjct: 512 STCPDLHDKFGADFEKAYTAYEDKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFK 571 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----- 472 D CN SP + V SNLC EI L T EIA+C L + NL A Sbjct: 572 DPCNVRSPQQ-HVGVVHSSNLCTEITLNTSDT--------EIAVCNLGSVNLVAHLVKQA 622 Query: 473 -----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKH 527 + D+L+ +A+R LD ++D Y +P A+ + R +G+G++ F L Sbjct: 623 DGSYALDHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLL 682 Query: 528 GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDL 587 Y+ +A ++ EA+ YY AS ELA+E+G + + + +GILP DT K Sbjct: 683 RTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLT 742 Query: 588 DTIA-----NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYV 642 + + DW LR I HG+RNS A+ P+ T S I + IEP + Sbjct: 743 EARGGYVEVDTSESLDWTTLRSRIAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNL 802 Query: 643 SIKASKDGILRQVVPD--------------------------------YEHLHDAYELLW 670 +K++ G V L Y + Sbjct: 803 YVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAF 862 Query: 671 EMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLY 730 E+ ++ QK+IDQ+ S N G ++L + A+ G+KT Y Sbjct: 863 EVD-PTWLVEAASRRQKWIDQAQSLNIYM-------GGASGKKLDEVYKLAWLRGLKTTY 914 Query: 731 YQNTRDGAEDAQDDL 745 Y T + + Sbjct: 915 YLRTMAATHVEKSTV 929 >UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=cellular organisms RepID=B2SYU1_BURPP Length = 1001 Score = 711 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 206/789 (26%), Positives = 333/789 (42%), Gaps = 76/789 (9%) Query: 11 DGSTERINLDKIHRVLDWAAEGLHN-VSISQVELRSHIQFYDGIKTSDIHETIIKAAADL 69 +G T +++ + +++ A L + VS + + YDG+ S ++++ I AA + Sbjct: 156 NGVTRPLDMAALRGIIELACSNLGDAVSADPIIAETVKNLYDGVPMSQVYDSAILAARTM 215 Query: 70 ISRDAPDYQYLAARLAIFHLRKKAYGQFEPPA-----LYDHVVKMVEMGKYDNHLLEDYT 124 I +D P Y + AR+ + +R++ + ++ + ++ G L + Sbjct: 216 IEKD-PAYSQVTARILLHTIRREILKEEVTQTEMGERYAEYFPQFIKRGVQAELLDDKLL 274 Query: 125 EEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY 184 + + K++ +D++RD+ F Y ++ L +Y + + G E Q ++ VA L N Sbjct: 275 QFDLKRLGAALDNNRDLQFGYLGLQTLYDRYFLHH--DGVRIEMPQAFFMRVAMGLSLNE 332 Query: 185 PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAI 244 R FY+ +S+F TP + T Q SSC L D LD I Sbjct: 333 --IDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVDDDLDGIYEALKEN 390 Query: 245 VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL 304 G+G + R+RALGS I+G G +PF K + +QGG R GA Sbjct: 391 ALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCA 450 Query: 305 FYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGL 364 + WHL++E L L+ N G + R M+ I L R+++G D TLFSPS P L Sbjct: 451 YLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDL 510 Query: 365 YDAFFADQEEFERLYTKYEKDDSIR-KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTH 423 +D F AD E+ Y I+ +++ A +L+ M+ TG +I D CN Sbjct: 511 HDLFGADFEKAYTAYEDKVARGEIKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVR 570 Query: 424 SPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------N 473 SP + V SNLC EI L T + EIA+C L + NL A Sbjct: 571 SPQQ-HVGVVHSSNLCTEITLNTS--------DAEIAVCNLGSVNLVAHLKEQADGTLVL 621 Query: 474 NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSD 533 + D+L+ +A+R LD ++D Y + A+ + R +G+G++ F L Y+ Sbjct: 622 DHDKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYAS 681 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA-- 591 A + EA+ YY AS ELA+E+G + + + +GILP D+ K D Sbjct: 682 EEAVKFADTSMEAVCYYAYYASTELAQERGRYSSYRGSLWDRGILPQDSVKLLADARGGY 741 Query: 592 ---NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 + DW LR I T+G+RNS A+ P+ T S I + IEP + +K++ Sbjct: 742 VEVDSSESMDWTELRSRIATYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNL 801 Query: 649 DGILRQVVPD--------------------------------YEHLHDAYELLWEMPGND 676 G V L Y +E+ Sbjct: 802 SGEFTVVNDYLVRDLKARGLWDEVMVADLKYFDGTLSRIDRIPADLRAIYATAFEVD-PK 860 Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRD 736 ++ QK+IDQ+ S N G ++L + A+ G+KT YY T Sbjct: 861 WLVEAASRRQKWIDQAQSLNIYM-------GGASGKKLDEIYKLAWVRGLKTTYYLRTMA 913 Query: 737 GAEDAQDDL 745 + + Sbjct: 914 ATHVEKSTV 922 >UniRef50_A4XD09 Ribonucleoside-diphosphate reductase n=44 Tax=Bacteria RepID=A4XD09_SALTO Length = 909 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 197/790 (24%), Positives = 322/790 (40%), Gaps = 76/790 (9%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHET 61 Q + V KR+G TE ++++KI R ++ L V +V ++ YDG T+++ Sbjct: 114 RQVMGVRKRNGDTEPVDVNKIVRAVERWVADLDEVDPLRVATKTISGLYDGATTAELDRL 173 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE 121 I+ AA+LI + P Y LAARL ++ K+ GQ + + + +G + Sbjct: 174 SIQTAAELIGEE-PQYSKLAARLLAAYVDKEVRGQ-QVASFSQSIRYAHGLGLISDE-TA 230 Query: 122 DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF 181 + +++D +D D+ F Y ++ + +YL+++ + + E+ Q+ + VA L Sbjct: 231 AFVSRNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQYWLLRVACGLS 290 Query: 182 SNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG-DSLDSINAT 240 FY +S+ +P + T Q SSC L++ D LDSI Sbjct: 291 GTPAE------AIGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYQR 344 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 + K GIGI R+R G+ IRG G +PF K V + +QGG R G Sbjct: 345 YHQVAKLSKFSGGIGIAWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGGRRKG 404 Query: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 AA ++ WH ++E L L++N G + R +++ + R+ D +L PS+ Sbjct: 405 AACVYLEPWHPDIEEFLELRDNTGEDARRTHNLNLANWLPDEFMRRVEADGDWSLIDPSE 464 Query: 361 VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC 420 P L D + EEF+ Y E + VKA +L+ MM+ A TG ++ D Sbjct: 465 APELPDLY---GEEFDAAYRVAE---KKAVRTVKARDLYGRMMRTLAQTGNGWMTFKDRS 518 Query: 421 NTHSPFDPAIA-PVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NN 474 NT S + SNLC EI + + E A+C L + NLGA + Sbjct: 519 NTLSNQTGEPGNTIHLSNLCTEILE--------VNNDAETAVCNLGSVNLGAHVTADGVD 570 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 ++L + AV LD ++D YP A R +G+G++ + Sbjct: 571 WEKLRDTVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFFTLRLPFDSA 630 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP 594 A+ L+ + E I L+ S LA+ G P + +T A+G L + + Sbjct: 631 EASELSTRVQEEIFLTALETSAGLAERFGPHPAYAQTRAARGDLHPELWGAVPSQPQR-- 688 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQ 654 W L+ + HGLRNS L A+ P+ T + I+ IEP + + + G Q Sbjct: 689 ----WAGLKARVGEHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGEFLQ 744 Query: 655 VVPD--------------------------------YEHLHDAYELLWEMPGNDGYLQLV 682 V + + + WE+P + L Sbjct: 745 VNTYLVGELKARGLWTASIRDQIKRAEGSVQGLAELPAEVRELFRTAWELP-QRALIDLA 803 Query: 683 GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQ 742 +IDQS S N + +L L A+K G+KT YY +R Q Sbjct: 804 AARAPYIDQSQSLNLFLAAP-------TIGKLSSMYLYAWKSGLKTTYYLRSRPATRIQQ 856 Query: 743 DDLVPSIQDD 752 + + Sbjct: 857 ATVAVTSTAQ 866 >UniRef50_Q9QAL9 Ribonucleoside-diphosphate reductase n=2 Tax=Shrimp white spot syndrome virus RepID=Q9QAL9_WSSV Length = 848 Score = 699 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 196/820 (23%), Positives = 337/820 (41%), Gaps = 96/820 (11%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAE---------GLHNVSISQVELRSHIQFYDG 52 Q ++KR+G+ + I+L+KI + ++ A + ++ ++ + Sbjct: 5 QQQSFISKRNGTKQEISLEKIIKRIENACLPVNQYVPKLDKNAINPQELASHIMDRLPAT 64 Query: 53 IKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKA--YGQFEPPALYDHVVKMV 110 I ++ + + A I D PD+ LA R ++ K + F Sbjct: 65 ISFQEMDDFLADYAKTKI-VDHPDFGKLAGRFICSNIHKNTKEWNSFSATTQKLRHAIHP 123 Query: 111 EMGKYDNHLLEDYTEE---EFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQ-----NRVT 162 GK + + + Y E + +D ID+ D F+ ++ LE YL++ +R Sbjct: 124 GTGKPASVVNDTYYENVMANAEILDAVIDYKMDYLFTCFGLRTLEYSYLIKIGSPTDRKK 183 Query: 163 GEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQF 222 + E Q + + VA + + ++ V YD +S + +P + T T Q Sbjct: 184 RILVERPQDMIMRVAVGIHG-----SDIKSVIETYDLMSRHYFTHASPTLFNCGTVTPQL 238 Query: 223 SSCVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF 281 SSC L+ DS++ I T G+GI+ +RA GSPI H G + F Sbjct: 239 SSCFLLGLQDDSIEGIYDTLKEAAIISKTAGGLGIHFHDLRAKGSPISSWSGTHPGLMAF 298 Query: 282 YKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQIN 340 + F +VK SQGG R GAA ++ WHL+V+ + + N G E R R + + ++ Sbjct: 299 LQIFNVSVKKVSQGGDKRRGAAAIYISDWHLDVKDFIDCRKNAGNEDLRTRDLFPAIWVS 358 Query: 341 KLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFS 400 L R+ G++ +L P + PGL D EEF+ LY KYE + K+ VKA LF Sbjct: 359 DLFMERVKAGKNWSLMCPHECPGLSDV---HGEEFKALYEKYEAEGKG-KEVVKARALFD 414 Query: 401 LMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIA 460 + R TG Y+ D N S + + ++ SNLC EI + ++ E A Sbjct: 415 QINSARIETGTPYVCFKDTINRKSNQE-NVGIIKSSNLCTEIVQYS--------DSEETA 465 Query: 461 LCTLSAFNLGAIN------------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAM 508 +C L++ + + E++ + + R LD ++D Y + + M Sbjct: 466 VCNLASIAVNKFVKYSPIPSLRPYVDYREMKRVVKIMTRNLDKVIDVNFYAVDKTRISNM 525 Query: 509 GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPW 567 R +G+GV A K + A + + FE I Y L+AS E+AKE+G Sbjct: 526 KTRPMGLGVQGLADLFFKLRIPFESEEAALINKRIFETIYYGALEASCEIAKEKGETYEL 585 Query: 568 FNETTYAKGILPIDTYKK---DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET 624 F + +KGI D K+ + D N +DWE LR I +G+ NS A MP+ + Sbjct: 586 FEGSPLSKGIFQFDMGKENIKNRDIYFNSLPIHDWEQLRRDIMKYGVHNSMFVAPMPTAS 645 Query: 625 SSQISNATNGIEPPRGYVSIKASKDGILRQVVPD-------------------------- 658 ++QI + EP + + G + V Sbjct: 646 TAQILGNSESFEPLTSNMYNRNVLSGSFQVVNEYVIRELIKLGEWNSVTKQRIMASGGSI 705 Query: 659 ------YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQ 712 + + ++ +WE+ L + F+DQ+ S N + + Sbjct: 706 QTLPNIPKSTKELFKTVWEI-NPRTTLDMAIQRGMFVDQAQSLNLFVEEPE-------LS 757 Query: 713 QLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDD 752 ++ + A++ G+KTLYY T+ A Q + ++ + Sbjct: 758 KVRSMTMYAWEKGIKTLYYLRTKGAARAVQFTVDKNVLQE 797 >UniRef50_Q75BW6 Ribonucleoside-diphosphate reductase n=2 Tax=Saccharomycetaceae RepID=Q75BW6_ASHGO Length = 864 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 215/822 (26%), Positives = 334/822 (40%), Gaps = 96/822 (11%) Query: 3 QNLLVTKRD-GSTERINLDKIHRVLDWAAEGL--HNVSISQVELRSHIQFYDGIKTSDIH 59 + + + D G TE + K+ L GL ++ I + R I+ S++ Sbjct: 5 KKIFIISDDSGLTEAFDERKLLESLRKLQFGLKINDADIDKAVKRIAAGIGGDIRDSELV 64 Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYG---------------QFEPPALYD 104 I + A +I+R PD+ LAAR+ I L K+ G E A Sbjct: 65 AYIGETLASMITR-HPDFSLLAARVEIKVLHKRLLGLGFTGNLAVLCESGDSPEGHATKR 123 Query: 105 HVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGE 164 L D + +D ID D TF+Y K L YL++++ G Sbjct: 124 KRAMSPCTRGPVRRELYDLAVQHRNIIDQAIDDTLDFTFTYFGWKTLCKSYLLKHQ--GR 181 Query: 165 IYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSS 224 ++E+ Q++++ VA L + V Y ++ +P + T ++ SS Sbjct: 182 VHETPQYMFMRVALALHG---PSGDIDRVLETYRLMANKYFIHASPTLFNAGTTSQFLSS 238 Query: 225 CVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYK 283 C L+ DS+D I GIGI+ IRA GS I G G +P Sbjct: 239 CFLLGIHEDSIDGIYNALHKAALISKASGGIGIHVSDIRANGSYISGTNGTSNGLVPMLS 298 Query: 284 HFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKL 342 F + + QGG R GA ++ WH +V L L+ N G E R R + YG+ I L Sbjct: 299 VFNSTARYVDQGGNKRPGAFCIYLEPWHADVFDFLRLRRNHGKEEMRARDLFYGLWIPDL 358 Query: 343 MYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLM 402 R+ + +LFSP++ GL D + E FE+LY +YE+ + +RVKA EL+ + Sbjct: 359 FMKRVENNGEWSLFSPNEAVGLSDCY---GEAFEQLYVRYER-ELEPYRRVKAQELWREI 414 Query: 403 MQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALC 462 + + TG ++ D CN+ S + ++ SNLC EI + E+A+C Sbjct: 415 LLSQTETGGPFMLYKDACNSKSN-QKNLGTIKSSNLCCEIVEYSS--------RDEVAVC 465 Query: 463 TLSAFNLGAI---------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTL 513 L++ L + L + + R LD +D DYP+P A+R R L Sbjct: 466 NLASVALPTFVSVTSDAITFDYARLHSVVKVMTRNLDKAIDIGDYPVPEAERSNKKHRPL 525 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTY 573 +GV A ++ A + + FE I + ++ S ELA E G F + Sbjct: 526 ALGVQGLADVFMLMRFPFNGEEAAQMNREIFETIYHAAVETSIELAAEYGVYASFVGSPA 585 Query: 574 AKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH-GLRNSTLSALMPSETSSQISNAT 632 +KG L D + ++ D + L+ DW+ L+E IK+ GLRNS L MP+ ++SQI T Sbjct: 586 SKGELQFDLWGRNKDNY--QFLYDDWDELKEKIKSGPGLRNSLLVGPMPTASTSQILGFT 643 Query: 633 NGIEPPRGYVSIKASKDGIL--------------------------------RQVVPDYE 660 EP + + G + + Sbjct: 644 ESFEPMTSMIYTRRVLSGEYTLVNKYMVQDFCDLGIWSEELKNRIIKDGGSIQGIDGIPP 703 Query: 661 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 L D Y+ +WE+P + L F+DQS S N M +L Sbjct: 704 DLKDLYKTVWELP-QRKLIDLSADRAPFVDQSQSLNLFLKEP-------TMGKLTSMHFY 755 Query: 721 AYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 A+K G+KT +YY T+ A Q L D+ SG K+ Sbjct: 756 AWKKGLKTGMYYLRTQAAANAIQFTLT----DENTLSGPVKL 793 >UniRef50_C5DEU8 Ribonucleoside-diphosphate reductase n=2 Tax=Saccharomycetales RepID=C5DEU8_LACTC Length = 867 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 206/823 (25%), Positives = 324/823 (39%), Gaps = 94/823 (11%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGL--HNVSISQVELRSHIQFYDGIKTSDI 58 M +V+ R+G ++ + + L A GL + V R S + Sbjct: 1 MTVKTVVSDRNGEANKLTSQALAQSLKQLAGGLQIEDADFDAVSRRILDAVPPSATHSSV 60 Query: 59 HETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYG---------------QFEPPALY 103 + + A + S PD+ LAAR I L KK G + P + Sbjct: 61 VQFGGEVLAAM-STTHPDFANLAARWEISELHKKLQGLSFTENLALLQKLRSSSKAPTVK 119 Query: 104 DHVVKMVEMGK-YDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVT 162 H K + + +D I DRD FSY K L YL++ R Sbjct: 120 RHKTSTSHNDKNLISAAFYEMALRYQTTLDAAIQPDRDFDFSYFGWKTLSKSYLIK-RKN 178 Query: 163 GEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQF 222 E +E+ QFL++ VA + + V YD +S +P + T + Sbjct: 179 EETHETPQFLFMRVALAIHG---PRGDIDAVLETYDLMSRKFFIHASPTLFNAGTVNQYL 235 Query: 223 SSCVLIE-CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF 281 SSC L+ DS+D I T G+G++ +R G+ I G G +P Sbjct: 236 SSCFLVAMIEDSIDGIYRTLHKTAMISKASGGVGVHVSNVRGTGAYISGSNGTSNGLVPM 295 Query: 282 YKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQIN 340 + F + QGG R GA ++ WH +V L L+ N+G E R R + + I Sbjct: 296 LRVFNNTARYVDQGGNKRPGAFCIYLEPWHSDVLDFLQLRKNQGKEELRARDLFLALWIP 355 Query: 341 KLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFS 400 L R+ + LFSP + PGL + F EEF++LY YEK +++ A +L+S Sbjct: 356 DLFMERVEQNGSWCLFSPDEAPGLQECF---GEEFKKLYETYEK-TLAPAKKMPAQKLWS 411 Query: 401 LMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIA 460 ++Q + TG ++ D CN S + ++ SNLC EI + P E A Sbjct: 412 EILQSQVETGGPFMLYKDSCNNKSN-QKNLGTIKSSNLCCEIVQYSSPS--------ETA 462 Query: 461 LCTLSAFNLGAI---------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRR 511 +C L++ L + + + L ++ + + LD+++D DYP+ AK R Sbjct: 463 VCNLASVALPSFVKLQREQAIFDFESLHKIVKVLTKNLDSVIDICDYPVEDAKFSNEKNR 522 Query: 512 TLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNET 571 + IGV A L + SA L + FE I + ++ S E +K+ G P F+ + Sbjct: 523 PIAIGVQGLADALMILRIPFHSESARVLNKQIFETIYHAAVETSIERSKKLGPYPSFDNS 582 Query: 572 TYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA 631 ++G D + + D E L DW+ +RE +K HG+RNS L MP+ ++SQI Sbjct: 583 PVSRGEFQFDLWGLNDDNY--EFLFSDWKEMREKVKQHGIRNSLLVGPMPTASTSQILGF 640 Query: 632 TNGIEPPRGYVSIKASKDGILRQVVPD--------------------------------Y 659 T EP + + G + Sbjct: 641 TESFEPMTSNIYTRRVLSGEFTVINKYMVDDFCRLGIWNEKLKNRIIEQNGSIQGIEGIP 700 Query: 660 EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLL 719 +L + Y +WE+P + L FIDQS S N M +L Sbjct: 701 SNLKELYRTVWEIP-QRVMIDLSADRGPFIDQSQSLNLFLREP-------TMGKLTSMHF 752 Query: 720 TAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 +K G+KT +YY T+ + + I + GA I Sbjct: 753 YGWKKGLKTGMYYLRTQAASGAIKFT----INQENTLRGAVSI 791 >UniRef50_Q8JKL8 Ribonucleoside-diphosphate reductase n=1 Tax=Heliothis zea virus 1 RepID=Q8JKL8_9VIRU Length = 939 Score = 687 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 194/790 (24%), Positives = 324/790 (41%), Gaps = 90/790 (11%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHN------VSISQVELRSHIQFYDGIKTSDIH 59 ++ KR+GS ER + K++ ++ ++I+ + YD + T ++ Sbjct: 7 MIVKRNGSVERFDPSKLYARIERCMTMSEPRLTTAFINIAGIVADVEKGLYDRVSTLELD 66 Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHL 119 + + A + S PD+ LAAR+A+ L K+ +F + + + E + Sbjct: 67 TLLSETCASM-STAHPDHSILAARIAMQALHKRTRSKFS-----ETIRDLYEANIVPQYY 120 Query: 120 LEDYTEEEFKQMDTFIDHDRDM-TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 + +E +D+ I DRD + +Y A K LE YL++ G+I E Q +Y+ A Sbjct: 121 FD-LVQEHADTLDSAIVDDRDFQSLTYFAYKTLERTYLIK-LADGKICERVQHMYMRTAL 178 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSI 237 + ++ V Y+ +S TP + T ++SC L+E DS+ + Sbjct: 179 GIHG-----RDIESVIETYNLLSNRYYVHSTPTLCHAATNRSNYASCYLLELKEDSIGGV 233 Query: 238 NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG- 296 T G+G++ ++R S I +G +P + + + +QGG Sbjct: 234 MDTLKDAATISKHCGGVGLHVHKLRCKNSTIHSTNGNASGLVPMLRMYNAMSRYVTQGGN 293 Query: 297 VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLF 356 R GA ++ WH +V + ++ N G E R R + Y + + L R+ G +L Sbjct: 294 KRPGAIAVYLEPWHADVFDFIEMRKNSGFEEARARDLFYALWVPDLFMKRVNDGGYWSLM 353 Query: 357 SPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQN 416 P PGL D + EEFE YT YE++ +RV A EL+ ++ + TG YI Sbjct: 354 CPDSSPGLSDCW---GEEFEAKYTAYEQEGRYV-RRVDARELWKAIVTAQVETGTPYILY 409 Query: 417 VDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---- 472 D N +S + ++ SNLC EI P E A+C L++ NL Sbjct: 410 KDTVNRNSNQR-HLGTIKGSNLCTEIVEYASP--------DETAVCVLASVNLPKFVEGK 460 Query: 473 -NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRY 531 NL+ L + L R L+ ++D YPIP+A + R +GIGV +A LA G Y Sbjct: 461 VFNLNLLAKTVRLVTRNLNKIIDNALYPIPSAAKSNFKHRPIGIGVQGYADALAMMGIAY 520 Query: 532 SDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIA 591 + L FE I + L S +LA+ G ++ + ++G L D Y Sbjct: 521 --EDSMQLNRDIFETIYHAALTESCQLARVHGVYESYHGSPTSRGELHFDRYSV------ 572 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI 651 DW +LR+ I +GLRNS L A MP+ T+SQ+ EP + + ++ G Sbjct: 573 -HSQKCDWSSLRKDIARYGLRNSLLVAPMPTATTSQVFGNAESFEPFTSNMYQRRTQSGE 631 Query: 652 L--------------------------------RQVVPDYEHLHDAYELLWEMPGNDGYL 679 + + E L Y+ +WE+P + Sbjct: 632 FQLTNVHLVRDLERLNLWNDDMAQLIMYNNGSIQNITIIPEELRRIYKTVWEIPT-KTLI 690 Query: 680 QLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGA 738 + +IDQS S N ++ A+ G+KT +YY T+ Sbjct: 691 DMAADRGAYIDQSQSFNLYVAEP-------TYSRMTSIHFYAWNKGLKTGMYYLRTKSAT 743 Query: 739 EDAQDDLVPS 748 + + Sbjct: 744 NAIPFTVDVN 753 >UniRef50_C5DY80 Ribonucleoside-diphosphate reductase n=1 Tax=Zygosaccharomyces rouxii RepID=C5DY80_ZYGRO Length = 875 Score = 686 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 202/814 (24%), Positives = 325/814 (39%), Gaps = 101/814 (12%) Query: 16 RINLDKIHRVLDWAAEGLHNV--SISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRD 73 N + + L + GL+ ++ + D ++ + + A L S Sbjct: 16 EYNPPLMRQKLRELSFGLNLDYLDFDKIVQKISSGVPDDVEGWQVIRHAAETVASLTSI- 74 Query: 74 APDYQYLAARLAIFHLRK--------------------KAYGQFEPPALYDHVVKMVEMG 113 PD+ LAARL I L K + G P+ V++ + G Sbjct: 75 HPDHSILAARLEIDELHKSLRGITFTENLKQLRSSTRVTSEGDNRVPSKRQKVMRAPKKG 134 Query: 114 KYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLY 173 L+ + E K+++ I H+RD F+Y K L YL++ +I+E+ QFL+ Sbjct: 135 VISEEFLQMALKYE-KKLNDAIVHERDFNFTYFGWKTLCQSYLIKKNAD-QIHETPQFLF 192 Query: 174 ILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GD 232 + VA + + V Y+ +S +P + T + SSC L+ D Sbjct: 193 MRVALAIHG---PFEDIDSVIETYELMSRKYFIHASPTLFNAGTVNQYLSSCFLVGMKED 249 Query: 233 SLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSC 292 S++ I T GIGI+ IRA G+ + G G +P + F + Sbjct: 250 SIEGIFKTLEDTALISKASGGIGIHVSNIRASGAHVSGSNGTSNGIVPMLRVFNNTARYV 309 Query: 293 SQGG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 QGG R GA ++ WH +V L L+ N G + R R + + + I L R+ Sbjct: 310 DQGGNKRPGAYCIYLEPWHSDVFDFLQLRKNHGKDELRARDLFFALWIPDLFMKRVQCNG 369 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR 411 + +LFSP + PGL D + +EFE LY +YE + +RVKA +L+S ++Q + TG Sbjct: 370 EWSLFSPDEAPGLSDVY---GKEFEELYEQYEATA-LPMKRVKAQKLWSEILQAQVETGG 425 Query: 412 IYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGA 471 ++ D CN S + ++ SNLC EI + E A+C L++ L Sbjct: 426 PFMLYKDSCNLKSN-QKNLGTIKSSNLCCEIVEYSSK--------DETAVCNLASVALPT 476 Query: 472 I----------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFA 521 + +L + R LD ++D YPIP A+ + R IGV A Sbjct: 477 FVVQVTNKGSIFDFVKLHAVVKTITRNLDRVIDVCKYPIPQAQYSNLRNRPEAIGVQGLA 536 Query: 522 YYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPID 581 Y A L + FE I + ++ S ELA+E GA F + ++G+L D Sbjct: 537 DVFLMLRIPYESQEARILNTQIFETIYHAAVETSIELAEEYGAYETFQGSPASQGLLQFD 596 Query: 582 TYKKDLDTIANEPLHYDWEALRESIKTH-GLRNSTLSALMPSETSSQISNATNGIEPPRG 640 + + D + L+ DW L+ I+ GLRNS L MP+ ++SQI T EP Sbjct: 597 LWGLNEDNY--DFLYRDWGELKHRIQNGRGLRNSLLLGPMPTASTSQILGYTESFEPMTS 654 Query: 641 YVSIKASKDGILRQVVPD--------------------------------YEHLHDAYEL 668 V + G V + + Y Sbjct: 655 NVYARRVLSGEFINVNQYMVDHFCQLGIWNEKLKNRIIADNGSVQNIQGLPDWIKKIYRT 714 Query: 669 LWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT 728 +WE+P + + FIDQS S N M +L A++ G+KT Sbjct: 715 VWEIP-QRPLIDMARDRSPFIDQSQSLNLFMKTP-------TMGKLTSMHFHAWRHGLKT 766 Query: 729 -LYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 +YY T+ + Q + D+ +G+ ++ Sbjct: 767 GMYYLRTQAASAAIQFT----VNDENTLTGSVEL 796 >UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alpha n=148 Tax=cellular organisms RepID=RIR1_CHLTR Length = 1047 Score = 686 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 215/794 (27%), Positives = 336/794 (42%), Gaps = 72/794 (9%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGL-HNVSISQVELRSHIQFYDGIKTSDIHETIIKA 65 V +DGST + ++ L A + + + FY GIK S++ I A Sbjct: 239 VLSKDGSTYTMTHSQLLAHLARACSRFPETTDAALLTDMAFANFYSGIKESEVVLACIMA 298 Query: 66 AADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPP-----ALYDHVVKMVEMGKYDNHLL 120 A I ++ PDY ++AA L + + K+A G+ + A DH + + G Sbjct: 299 ARANIEKE-PDYAFVAAELLLDVVYKEALGKSKYAEDLEQAHRDHFKRYIAEGDTYRLNA 357 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 E + + +D RD+ FSY ++ L +Y N G E+ Q ++ VA L Sbjct: 358 ELKHLFDLDALADAMDLSRDLQFSYMGIQNLYDRYF--NHHEGCRLETPQIFWMRVAMGL 415 Query: 181 FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT 240 N +T + FY+ +STF+ + TP + Q SSC L D+L +I Sbjct: 416 ALNEQDKT--SWAITFYNLLSTFRYTPATPTLFNSGMRHSQLSSCYLSTVQDNLVNIYKV 473 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 + GIG + IRA G+ I+G G IPF K + +QGG R G Sbjct: 474 IADNAMLSKWAGGIGNDWTAIRATGALIKGTNGRSQGVIPFIKVTNDTAVAVNQGGKRKG 533 Query: 301 AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD 360 A ++ +WHL+ E L L+ N G E R ++ I L + RL + TLFSP D Sbjct: 534 AVCVYLEVWHLDYEDFLELRKNTGDERRRAHDVNIASWIPDLFFKRLQQKGTWTLFSPDD 593 Query: 361 VPGLYDAFFADQEEFERLYTKYEKDDSIR-KQRVKAVELFSLMMQERASTGRIYIQNVDH 419 VPGL+DA+ + E Y + IR ++V+A +L+ M+ TG ++ D Sbjct: 594 VPGLHDAYGEEFERLYEEYERKVDTGEIRLFKKVEAEDLWRKMLSMLFETGHPWMTFKDP 653 Query: 420 CNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----N 474 N S VR SNLC EI L E A+C L + NL + Sbjct: 654 SNIRSA-QDHKGVVRCSNLCTEILLNCSET--------ETAVCNLGSINLVQHIVGDGLD 704 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 ++L E +AVR LD ++D YP AK R +G+GV+ F L K Y+ Sbjct: 705 EEKLSETISIAVRMLDNVIDINFYPTKEAKEANFAHRAIGLGVMGFQDALYKLDISYASQ 764 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDT------YKKDLD 588 A + E I YY ++AS LAKE+G + + + +G+LPIDT Y+ + + Sbjct: 765 EAVEFADYSSELISYYAIQASCLLAKERGTYSSYKGSKWDRGLLPIDTIQLLANYRGEAN 824 Query: 589 TIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 + DWE +R +K HG+R+ L A+ P+ T S I T IEP ++ +K++ Sbjct: 825 LQMDTSSRKDWEPIRSLVKEHGMRHCQLMAIAPTATISNIIGVTQSIEPTYKHLFVKSNL 884 Query: 649 DGIL--------------------------------RQVVPDYEHLHDAYELLWEMPGND 676 G ++ +HL + +E+ + Sbjct: 885 SGEFTIPNVYLIEKLKKLGIWDADMLDDLKYFDGSLLEIERIPDHLKHIFLTAFEI-EPE 943 Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRD 736 ++ QK+ID S N ++L LTA+K G+KT YY + Sbjct: 944 WIIECASRRQKWIDMGQSLNLYLAQPD-------GKKLSNMYLTAWKKGLKTTYYLRSSS 996 Query: 737 GAEDAQDDLVPSIQ 750 + + + + Sbjct: 997 ATTVEKSFVDINKR 1010 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 47/165 (28%), Gaps = 29/165 (17%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVS----------------ISQVELRSH 46 + + KR+G + ++I + L+ A + QV Sbjct: 7 KQCTIVKRNGMFVPFDRNRIFQALEAAFRDTRRIDDHMPLPEDLESSIRSITHQVVKEVV 66 Query: 47 IQFYDG--IKTSDIHETIIK----AAADLISRDAPDY--QYLAAR----LAIFHLRK-KA 93 + DG + I + + ++RD Y A R ++ +R+ Sbjct: 67 QKITDGQVVTVERIQDMVESQLYVNGLQDVARDYIVYRDDRKAHRKKSWQSLSVVRRCGT 126 Query: 94 YGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHD 138 F P + + K + EE + I + Sbjct: 127 VVHFNPMKISAALEKAFRATDKTEGMTPSSVREEINALTQNIVAE 171 >UniRef50_C7NLI3 Ribonucleoside-diphosphate reductase n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NLI3_KYTSD Length = 875 Score = 684 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 201/814 (24%), Positives = 318/814 (39%), Gaps = 107/814 (13%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETII 63 + V KR G E++++ KI ++ +GL V +V ++ YDG T+++ + I Sbjct: 35 TMRVVKRSGEHEQVDVTKIVAAVERCCDGLPEVDPLRVATKTISGLYDGATTAELDKLAI 94 Query: 64 KAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDY 123 AA++ + + P Y LA RL + K+ GQ + V E G + + Sbjct: 95 ATAAEMTATE-PQYSRLAGRLLAGVIDKEVRGQ-GIGSFSAAVRTGHEQGLIGDE-TAAF 151 Query: 124 TEEEFKQMDTFIDHDR----DMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 E ++D + + D F Y ++ + +YL+++ +T + ES Q+ + V+A Sbjct: 152 VAEHASRLDDAVYRAQAAHADWRFDYFGLRTVYDRYLLRHPLTRAVVESPQYWLMRVSAG 211 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLI-ECGDSLDSIN 238 L F++ +S+ +P + T Q SSC LI D LDSI Sbjct: 212 LSHTGEE------AVEFFELLSSLAYLPSSPTLFNSGTRHTQMSSCYLIDSPQDDLDSIY 265 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVR 298 + K GIG+ RIR+ G+ IRG G +P+ + +V + +QGG R Sbjct: 266 ERYHQVAKLSKFAGGIGLAFSRIRSRGALIRGTNGHSNGIVPWLRTLDASVAAVNQGGRR 325 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 GAA ++ WH +VE L L++N G + R +++ I R+ +L P Sbjct: 326 KGAACIYLEPWHPDVEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVEADGQWSLIDP 385 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 VP L D + F+ Y E+ + + V A L+ MM+ A TG+ ++ D Sbjct: 386 DAVPELPDLW---GPAFDAAYRAAEERGDVV-RTVSARYLYGRMMRTLAQTGQGWMTFKD 441 Query: 419 HCNTHSPFDPAIAP--------------VRQSNLCLEIALPTKPLNDVNDENGEIALCTL 464 N V SNLC EI T N E A+C L Sbjct: 442 ASNRACNQTSDDQTPRVAADGTVQPAPVVHLSNLCTEIIEVTS--------NDETAVCNL 493 Query: 465 SAFNLGAI---------------------NNLDELEELAILAVRALDALLDYQDYPIPAA 503 + NL A + D L LAV LD ++D YP A Sbjct: 494 GSVNLAAHLQWSDGTTGVRPTDPAARATGIDTDRLRSTVRLAVTYLDRVIDINYYPSEQA 553 Query: 504 KRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG 563 R +G+G + + A L+ + E IQ L+ S ELA++ G Sbjct: 554 AASNPRWRPIGLGSMGLQDVFFALRMPFDAPEAKELSTRIAEEIQLSALERSAELAEQFG 613 Query: 564 ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSE 623 A P F ET A+G L D + W A+R+ I HGLRNS + A+ P+ Sbjct: 614 AHPAFAETRAARGQLQHDLQGVEP------TQTERWAAVRQRIADHGLRNSLMIAIAPTA 667 Query: 624 TSSQISNATNGIEPPRGYVSIKASKDGILRQVV--------------------------- 656 T + I+ IEP + + + G QV Sbjct: 668 TIASIAGCYECIEPQVSNLFKRETLSGEFMQVNTALVGELKSLGLWTEAVREKLKADNGS 727 Query: 657 -----PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPM 711 E + WE+P +++ Q ++DQS S N + + Sbjct: 728 VAGIADLPEETRRLFRTAWELP-QKALIEMAAARQAYVDQSQSLNLFMESPN-------I 779 Query: 712 QQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDL 745 +L L A+K G+KT YY +R Q + Sbjct: 780 GKLSSMYLYAWKAGLKTTYYLRSRPATRIQQATV 813 >UniRef50_D1BPH5 Ribonucleoside-diphosphate reductase n=3 Tax=Veillonella RepID=D1BPH5_VEIPT Length = 760 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 210/792 (26%), Positives = 371/792 (46%), Gaps = 69/792 (8%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETI 62 +++ KRDG E ++++K R++ +A GL + ++E+ + +QF DG+ T +I +T+ Sbjct: 1 MEIMIKKRDGHFEPLSVEKTKRMIAFACLGLDSCDPLELEMDAKLQFVDGMTTKEIQKTL 60 Query: 63 IKAAADLI------------SRDAPDYQYLAARLAIFHLRKKA-----YGQFEPPALYDH 105 ++ A + + ++ D+Q++AARL +F L K+A Y F + Sbjct: 61 VQTAIEKVISKKDDGFGNQVNKMNQDWQFVAARLFLFDLYKEAAITRRYKAFGYGNFPNL 120 Query: 106 VVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEI 165 V +VE KY + + +YT +E +++ +I RD F+Y +K L +YLV+ EI Sbjct: 121 VNMLVEEKKYADFFVTEYTADELQELGDYIKPKRDYLFNYEGLKLLADRYLVKG-FNKEI 179 Query: 166 YESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSC 225 +E Q ++ +A L + +++Y K+FYD +S K++ TP ++ TP Q SSC Sbjct: 180 FELPQERFMAIAMHLALVEGK-NKVKYAKKFYDLMSQLKMTTATPTLANAGTPFHQLSSC 238 Query: 226 VLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHF 285 + D+L SI +S + +GI G++RAL S IRG + G IP+ + + Sbjct: 239 FISGVDDNLWSIYDVNSKFSRVSKHGGALGIYLGKVRALNSDIRGFKNSSGGVIPWIRLY 298 Query: 286 QTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYT 345 + Q G R G AT+ +WH + + L+ N G + + + + + + Sbjct: 299 NDTAVAVDQLGKRKGGATVTLDIWHKDFYEFVELRTNNGDDRRKAHDIFPAISVPNIFME 358 Query: 346 RLLKGEDITLFSPSDVPGLYDAFFA------DQEEFERLYTKYEKDDSIRKQRVKAVELF 399 R+L E+ TLF P ++ + D++EF + Y + E+D ++ V A+++ Sbjct: 359 RMLARENFTLFDPHEILAVKGYSLENYFDTDDKKEFTKRYIECEQDPNLHGIEVPALDMM 418 Query: 400 SLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND----- 454 +M+ TG +I D N +P + + SNLC EIA N + Sbjct: 419 KKIMRSAVETGTPFIFFRDTVNAANP-NKHAGMIYASNLCHEIAQNVGFTNLAEEIINED 477 Query: 455 -------ENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGA 507 G++ C L++ +LG I + +ELEE L +R LD ++ P+P ++ + Sbjct: 478 GTITTKTNTGDMVTCNLNSISLGRITD-EELEENIALQIRMLDNVISINQAPVPESRMTS 536 Query: 508 MGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW 567 R +G+G + +YL H ++ + K FE I +Y +KAS ELAKE+GA P Sbjct: 537 DKYRAIGLGTSGYHHYLVNHDIQWESDEHIEVADKLFENIAFYAIKASMELAKEKGAYPA 596 Query: 568 FNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQ 627 F + + G W+ L + +G+RN L A+ P+ ++S Sbjct: 597 FKGSEWETGEYF----------TRRGYTSDRWKQLAADVAKYGIRNGYLMAVAPTGSTSN 646 Query: 628 ISNATNGIEPPRGYVSIKASKDGILRQVVPDY-EHLHDAYELLWEMPGNDGYLQLVGIMQ 686 I+N T GI+P I+ K + PD + Y+ + ++ G+ Q Sbjct: 647 IANTTAGIDPIFKKFFIEEKKGSFTPKTAPDLNDKTFWLYKEAHTID-QQWSIKACGVRQ 705 Query: 687 KFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLV 746 + IDQ+ S N P + +++L + AYK G+KT+YY + Sbjct: 706 RHIDQAQSFNLYITPQ------MKAKEILDLYVEAYKQGIKTIYYIRNQ----------- 748 Query: 747 PSIQDDGCESGA 758 S++ D C S + Sbjct: 749 -SLEMDECTSCS 759 >UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E2 Length = 790 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 217/785 (27%), Positives = 345/785 (43%), Gaps = 54/785 (6%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + VTKR+G+TE + KI + ++WA +G +V +V ++ + YDGIKTSDI + +IK Sbjct: 1 MNVTKRNGATEPFSPSKIEKAVNWAVDG-TSVESQEVIDKAILLIYDGIKTSDIQQALIK 59 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPA----LYDHVVKMVEMGKYDNHLL 120 AA L+S D ++ARL + L K G + Y H+ +E G L Sbjct: 60 GAAKLVSATKADASLVSARLLLLDLYKTVCGVNGKVSGGGFQYPHIKDYLEKGVSLKLLD 119 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQ-----------NRVTGEIYESA 169 + + ++++ I +RD++F Y + L +Y ++ ++G I E Sbjct: 120 PELLNYDLERINAAIKPERDLSFHYLGLDTLADRYFIRANRDIRLEKETGNMSGNIIELP 179 Query: 170 QFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE 229 Q ++ VA + E R +Y+ S + TP + T Q SSC L + Sbjct: 180 QHFWMRVAMGVALKEKPEIRTSVALAYYELYSKLEYVSSTPTLFNAGTLHPQLSSCYLNQ 239 Query: 230 CGDSLD---------SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIP 280 D++ SI GIG + +R I G +G +P Sbjct: 240 VSDTIAADEGDNRFASIFGAIEETALLSKFAGGIGTDWTPVRGENELIFGTNGISSGVVP 299 Query: 281 FYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQIN 340 + K + +QGG R G+ + WH + + LK G + R + + Sbjct: 300 YIKVQNNTAVAVNQGGKRKGSVAPYLEAWHPDFMAFCELKRESGDDRRRAHDVFPAAWVP 359 Query: 341 KLMYTRLLK-GEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELF 399 L+ R + FSP P L++ + E+F + Y + E Q + A++++ Sbjct: 360 DLLIERKEDPNAMWSFFSPKRFPELHELY---GEDFVKRYEELEAAGEYDFQ-LPAIQVW 415 Query: 400 SLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEI 459 ++ TG +I D CN +P + SNLC EI L T E Sbjct: 416 RHLLTNLFETGHPWITYKDECNRRNPQQ-HAGVIHHSNLCTEITLNTSK--------DET 466 Query: 460 ALCTLSAFNLGAINN----LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGI 515 A+C L + NL + + L+ L E+ LA+R LD+++D YP A R +G+ Sbjct: 467 AVCNLGSINLSQVMSAPNPLERLREVIRLAIRNLDSVIDVNYYPSDRASNSNFKHRPIGL 526 Query: 516 GVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAK 575 GV+ + +L K G + FEAI Y+ ++AS +LA+E+G+ P F + ++K Sbjct: 527 GVMGYYEWLVKQGVDFESEEHLKQADALFEAISYFAIEASADLAQERGSYPSFEGSNWSK 586 Query: 576 GILPIDTYKKDLDTIA--NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATN 633 GILPID K D ++P +DWEALRE +K G+RNS + A+ P+ T S I+ T Sbjct: 587 GILPIDNAKLMEDGKPFFDQPRRFDWEALREKVKK-GMRNSNVMAIAPTATISNIAGTTQ 645 Query: 634 GIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGY--LQLVGIMQKFIDQ 691 EPP K++ G + V P H+ D Y LL E D ++ + QK+IDQ Sbjct: 646 CTEPPFLLEYFKSNLGGTYQVVDPAIAHVGDKYHLLKESYYVDQLYIIKAAAVRQKWIDQ 705 Query: 692 SISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQD 751 S S N + L TA K G+KT YY + AE + I + Sbjct: 706 SQSTNLF------AKQGTTGRDLDLWYTTAKKLGLKTTYYLRNQSDAEKSASMRTKVIAE 759 Query: 752 DGCES 756 + Sbjct: 760 LANAA 764 >UniRef50_B0R7R5 Ribonucleoside-diphosphate reductase n=2 Tax=Halobacterium salinarum RepID=B0R7R5_HALS3 Length = 804 Score = 676 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 193/778 (24%), Positives = 313/778 (40%), Gaps = 66/778 (8%) Query: 22 IHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLA 81 + R L + + + + ++ + YD T + ++ ++ A I R P Y+ +A Sbjct: 16 LDRALTDHEDDIDSDARDRILTEATRNAYDDATTDERYDALLGALTGRIDR-HPAYKTVA 74 Query: 82 ARLAIFHLRKKAYGQFEPPAL----YDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDH 137 R+ L ++ ++P ++ G + L E + + ++ I Sbjct: 75 GRVLRERLERRLVDDYDPATRDAATRQAFRDGIQRGLDADLLDERMGDYDLNRLADAITP 134 Query: 138 DRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFY 197 RD Y A+ L +Y ++ + +E Q ++ VA + R +Y FY Sbjct: 135 ARDDRLDYMAMDTLRQRYFLREPD-ADPFELPQPFWMRVAMGVALREDPADREEYAIEFY 193 Query: 198 DAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGIN 257 DA+ST + TP + T Q SSC L D LD I K G+G + Sbjct: 194 DALSTLRFVHSTPTLFHAGTTHAQLSSCYLTTVPDDLDGIFDAYKEHAKLSKWSGGLGND 253 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 +RA GS I TG +PF K + ++ G R GAA + WHL+ + Sbjct: 254 WTPLRAAGSLIESTGVESTGTVPFLKISNDVTAAINRSGKRRGAAAAYLACWHLDFPAFC 313 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFER 377 L+ N G E R M+ I L R+ + TLFSP + LY+ + +D E R Sbjct: 314 DLRRNTGDERRRTHDMNTAAWIPDLFMERVRADKQWTLFSPKETGDLYELYGSDFAERYR 373 Query: 378 LYTKYEKDDSI-RKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 Y D I R +RV A +L+ M+ TG ++ D CN SP VR S Sbjct: 374 EYEAMADDGDIQRFERVDATDLWRTMLTRLFETGHPWLTFKDPCNVRSP-QDHAGTVRSS 432 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALDA 491 NLC EI L T E A+C L + NL + ++L E A+R LD Sbjct: 433 NLCTEITLNTS--------EEETAVCNLGSVNLARHLDDGDIDREQLSETVETAMRMLDN 484 Query: 492 LLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYL 551 ++D YP A+R M R +G+GV+ F L + + A + E + Y+ Sbjct: 485 VVDLNFYPTENAERSNMRHRPVGLGVMGFHDALQQMRVPMASDDALDRADALQEYVAYHA 544 Query: 552 LKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDT-----IANEPLHYDWEALRESI 606 + AS +LA E+G + + + + + P DT + DW +R+ + Sbjct: 545 IGASADLAAERGTYESYEGSKWDRDVFPQDTVDRLESERGREIPVPREERLDWSDVRQRV 604 Query: 607 KTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGIL-------------- 652 THG+RNS A+ P+ T S I+ T IEP + +K++ G Sbjct: 605 ATHGMRNSNTMAVAPTATISTIAGTTPSIEPVYSNLYVKSNMSGDFTVVNDRLVADLEER 664 Query: 653 ------------------RQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSIS 694 +++ E + + Y +E+ L+L +IDQS S Sbjct: 665 DLWTEELRDKLTYHDGSVQELDAVPEDVQELYRTAFEID-PRHQLRLAARRGVWIDQSQS 723 Query: 695 ANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDD 752 N + + +L + TA++ G+KT YY T ++ + L DD Sbjct: 724 VNVFFPETD-------GSKLSEVYQTAWELGLKTTYYLRTLGASQIEKTTLDMDEYDD 774 >UniRef50_A9KRT3 Ribonucleoside-diphosphate reductase n=2 Tax=Clostridiales RepID=A9KRT3_CLOPH Length = 764 Score = 675 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 208/794 (26%), Positives = 358/794 (45%), Gaps = 69/794 (8%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETI 62 ++++ KR+ + E + ++K R++ +A EGL ++EL + IQF DG+ T +I + + Sbjct: 1 MDIMIKKRNQTYEPLCVEKTKRMIAFACEGLEGCDPIELELDARIQFVDGMSTKEIQKML 60 Query: 63 IKAAADLISRDAPD------------YQYLAARLAIFHLRKKA-----YGQFEPPALYDH 105 ++ A + + D +QY+AARL +F L K+A Y F + Sbjct: 61 VQTAIEKVIHTKKDEFGNIMRETHTNWQYVAARLFVFDLYKEAAIERHYKHFGYGDFLNL 120 Query: 106 VVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEI 165 V +VE Y ++L + YT+ E K++ +I +RD F+Y VK L +YLV+ + E+ Sbjct: 121 VNSLVEEELYGSYLTDAYTQLEIKELGAYIKPERDYLFNYEGVKLLSDRYLVKG-LKKEV 179 Query: 166 YESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSC 225 +E Q ++++A L + R++Y K+FYD +S+ ++++ TP ++ TP Q SSC Sbjct: 180 FELPQERFMVIAMHLAIPEEKAKRMEYAKKFYDLLSSLQMTVATPTLANAGTPFYQLSSC 239 Query: 226 VLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHF 285 + GD+L SI + +GI G+IRAL S IRG + G IP+ + + Sbjct: 240 FISVVGDNLWSIYDVNQKFSSVSKHGGALGIYVGKIRALNSEIRGNKNASGGVIPWVRLY 299 Query: 286 QTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYT 345 + Q G R G AT+ +WH ++ L LK N G + + + + + L Sbjct: 300 NDTAIAVDQLGRRKGGATITLDIWHADLYDFLDLKTNNGDDRRKAHDIFTALSVPNLFME 359 Query: 346 RLLKGEDITLFSPSDVPGLYDAFFAD------QEEFERLYTKYEKDDSIRKQRVKAVELF 399 RL + E+ +LF P V + D + EF + Y E+ + + V A+E+ Sbjct: 360 RLERREEWSLFDPYLVNKVMGFSLEDSYDEVAENEFTKRYLACEECKELPRITVPALEVM 419 Query: 400 SLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND----- 454 +M+ TG +I D N +P + + SNLC EI + Sbjct: 420 KRIMKSAVETGAPFIFFRDTVNQANP-NKHAGMIYSSNLCQEITQNMSESELREELIQDE 478 Query: 455 ----------ENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAK 504 + G++ C L++ +LG I +L L +R LD ++ P+ A+ Sbjct: 479 SGAKVIITKIKPGDMVTCNLNSISLGRIEK-KDLAVNIPLQIRMLDNVITLNQTPVAEAR 537 Query: 505 RGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA 564 + R +G+G + +YL HG + FE I Y +KAS ELAKE+G Sbjct: 538 ITSDKYRAIGLGTSGYHHYLVNHGIGWETQKHLEEADDLFEEIAYQAIKASMELAKEKGK 597 Query: 565 CPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET 624 F+ + + G + W AL + + HG+RN ++A+ P+ + Sbjct: 598 YEAFHGSEWETGEYFKR----------RDYTSDRWLALSKEVAEHGMRNGYITAVAPTGS 647 Query: 625 SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGI 684 +S I+N + GI+P I+ K + + PD + ++ GI Sbjct: 648 TSNIANTSAGIDPIFKRYFIEEKKGSFIPKTAPDLNTSNFWLYKEAHTIDQQFSIRACGI 707 Query: 685 MQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDD 744 Q+ IDQS S N P + +L + A++ G+KT+YY + Sbjct: 708 RQRHIDQSQSFNLYITP------EYKAIDILNLYMEAWRKGLKTIYYVRNQ--------- 752 Query: 745 LVPSIQDDGCESGA 758 S++ D C S + Sbjct: 753 ---SLEMDECTSCS 763 >UniRef50_C1VDU7 Ribonucleoside-diphosphate reductase n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VDU7_9EURY Length = 845 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 197/791 (24%), Positives = 320/791 (40%), Gaps = 77/791 (9%) Query: 13 STERINLDKIHRVLDWAAEGLHNVSISQV----ELRSHIQFYDGIKTSDIHETIIKAAAD 68 ST+ + + +L+ A G +V +V + YDG +++E + Sbjct: 3 STQTTQTNDVRTILNQARTGYEDVLTDEVMDRLVTETERNLYDGASIDEVYEALEGVTTA 62 Query: 69 LISRDAPDYQYLAARLAIFHLRKK--------AYGQFEPPALYDHVVKMVEMGKYDNHLL 120 I RD P Y+Y+AA + ++ + +E G ++ L Sbjct: 63 RIERD-PAYKYVAADIHRRRYFRRVTGEQLSETADDDTATTYRETFAANLERGVDEDLLD 121 Query: 121 EDYTE--EEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 E + + ++ + +RD F Y A+ L +Y ++ V G+ E Q ++ VA Sbjct: 122 ERLLDGRFDIDELADALVLERDDKFDYIAMSTLTQRYFIKTEVDGDPLELPQAFWMRVAM 181 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSIN 238 L + FYD +S + TP + T Q SSC L D L+ I Sbjct: 182 GLAIEE--DDPQARALEFYDVLSRLLFTPSTPTLFHSGTTHPQLSSCYLTTVEDDLEHIF 239 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVR 298 + + G+G + +RA G+ I TG +PF K + ++ G R Sbjct: 240 DSYKHHAQLSKWSGGLGNDWTNLRAEGALIESTGVESTGTVPFLKISNDVTAAINRSGKR 299 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 GAA + WH++ + L L+ N G E R M+ + L R+ E TLFSP Sbjct: 300 RGAACGYLEAWHMDFPAFLDLRRNTGDERRRTHDMNTAAWVPDLFMERVENDETWTLFSP 359 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIR-KQRVKAVELFSLMMQERASTGRIYIQNV 417 +VP L++ + + E R Y + + +R + V A +L+ M+ TG +I Sbjct: 360 DEVPELHETYGEEFAELYREYEEKAEAGELRQYETVDAADLWRTMLTRLFETGHPWITFK 419 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN---- 473 D CN SP + V SNLC EI L T E A+C L + NL Sbjct: 420 DPCNVRSP-QDHVGTVHSSNLCTEITLNTS--------AEEHAVCNLGSVNLSNHVADSE 470 Query: 474 -NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYS 532 + + L + A R LD ++D YP A+ M R +G+GV+ F L + G + Sbjct: 471 LDREALADTIETATRMLDNVVDLCFYPTDEAEYSNMRHRPVGLGVMGFHDALMQVGTSMA 530 Query: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDT--- 589 A ++ E + Y+ + S+ LAKE+GA F + + +GILP DT + Sbjct: 531 SEEAVEAANRWQEFVSYHTILNSSRLAKERGAYETFEGSKWDRGILPHDTVDRLEAERGR 590 Query: 590 --IANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS 647 + DW+ +R+ I HG+RNS A+ P+ T S I+ T IEP + +K++ Sbjct: 591 EIPTDRSETMDWDRVRDHIAEHGMRNSNTMAIAPTATISTINGTTPSIEPIYSNLYVKSN 650 Query: 648 KDGIL--------------------------------RQVVPDYEHLHDAYELLWEMPGN 675 G ++V E + + Y +E+ Sbjct: 651 MSGDFTVINEQLVDDLKAEGLWDDEMVDQIKFFDGSIQEVSAIPEEMRELYRSAFEID-P 709 Query: 676 DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTR 735 L+L ++IDQSIS N + + L TA++ GVKT YY T Sbjct: 710 RHQLRLTAHRGQWIDQSISHNVFFPSTD-------GSLLDDVYKTAWRLGVKTTYYLRTL 762 Query: 736 DGAEDAQDDLV 746 ++ + L Sbjct: 763 GASQIEKSTLD 773 >UniRef50_D2E8G7 Ribonucleoside-diphosphate reductase n=1 Tax=Anguillid herpesvirus 1 RepID=D2E8G7_9VIRU Length = 833 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 197/817 (24%), Positives = 329/817 (40%), Gaps = 108/817 (13%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHET 61 N V K G TE + K+ L+ + GL+ V + ++ + YDGI T ++ + Sbjct: 3 NFSVRKHSGRTEMWSTKKMLSKLESLSYGLNTDFVDLDRLVTATMDGLYDGITTKELDDV 62 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE 121 + + AA S DY LA R+ + + K G F A+ + M E + L Sbjct: 63 MARTAAGFTSY-HFDYSLLAGRIVVNSIHKYTVGNFLQGAVL--LQNMDETKPHVTDELV 119 Query: 122 DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF 181 + Q+ ID+ RD TF++ A++ LE YL++ V + E Q L++ +A + Sbjct: 120 AVARKYENQIQGAIDYSRDYTFNFFAIRTLERAYLLK--VNERVMERPQHLFMRIAIGIH 177 Query: 182 SNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE-CGDSLDSINAT 240 L+ V Y +S + S +P + T + +SC L+ DS+ I +T Sbjct: 178 GF-----DLESVLETYRCLSEKRFSHASPTLFHAGTNFAKLASCYLVTLADDSIAGIYST 232 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VRG 299 + GIG +RA GS I G +P + F + QGG R Sbjct: 233 LQECAQIAKCSGGIGAAISNVRAEGSAINSTNGTANGLVPMLRVFNAMTRMVDQGGNKRP 292 Query: 300 GAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPS 359 GA ++ WH ++ + L LK N G +G R R + YG+ I+ L R+ + +L P Sbjct: 293 GAMAVWLEPWHADIAAWLDLKKNLGDDGIRARDLFYGLWISDLFMERVKDDQMWSLMCPK 352 Query: 360 DVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDH 419 PGL D + +D F LYTKYE ++V+A EL++ +++ + G ++ D Sbjct: 353 KCPGLMDVYGSD---FVALYTKYESQGMYV-KQVEARELWTHILRSQMENGMPFMMYKDS 408 Query: 420 CNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG--------- 470 CN S + V+ NLC EI ++P A+C L+A L Sbjct: 409 CNRKSNQQ-HVGVVKCGNLCTEIVEVSEPHRP--------AVCNLAAVCLPTCVACECGI 459 Query: 471 -------------------------AINNLDELEELAILAVRALDALLDYQDYPIPAAKR 505 + EL L + V+ L+ ++D DY A Sbjct: 460 RQASRTEVASSASSAVQACEDPTCRKSFDFGELGRLTEVLVKNLNRVIDKSDYAFDGANH 519 Query: 506 GAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGAC 565 R LGIGV A A G + A L + FE + Y+ + AS +LA+E Sbjct: 520 RNSQDRPLGIGVQGLADVFAMLGLAFDGTEAARLNVQIFETMYYHAMAASCKLAEEDQPY 579 Query: 566 PWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETS 625 P + + ++GI D + + +DW +L+ ++ +G+RNS L A MP+ ++ Sbjct: 580 PTYKGSPVSQGIFQFDMWGVKPSAM------HDWTSLKRRVQKYGVRNSLLLAPMPTAST 633 Query: 626 SQISNATNGIEPPRGYVSIKASKDGILRQVVPD--------------------------- 658 +QI EP + + G + + P Sbjct: 634 AQIFGNNEAFEPFTNNLFTRGVLSGDFQIINPHLVRELIRLGMWGEETRMRLMADNGSIR 693 Query: 659 -----YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQ 713 +H D ++ +WE+ + + FIDQS S N + + + Sbjct: 694 TWEDVPQHTRDVFKTVWEIS-QKTIINMAADRAPFIDQSQSLNIHMADPN-------VSK 745 Query: 714 LLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSI 749 L + ++ G+KT +YY +R Q + + Sbjct: 746 LSSMHMYGWQKGLKTGMYYLRSRPAVNAIQFTVDKTK 782 >UniRef50_C7NVI1 Ribonucleoside-diphosphate reductase n=2 Tax=Halobacteriaceae RepID=C7NVI1_HALUD Length = 815 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 198/787 (25%), Positives = 320/787 (40%), Gaps = 73/787 (9%) Query: 14 TERINLDKIHRVLDWAAEGLHNV---SISQVELRSHIQFYDGIKTSDIHETIIKAAADLI 70 D+I +LD A +G V + + Y G ++++E I+ + I Sbjct: 4 QTPTQTDRIASILDRATDGEPTVTESDRTALRRAIDENCYAGADRAEVYEAILGTLSARI 63 Query: 71 SRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDH-----VVKMVEMGKYDNHLLEDYTE 125 P Y+ +AAR+ + G+ D + +E G + L + Sbjct: 64 -EAKPAYKRVAARVFRQRYYHEVIGEDLTGTELDRAYRTIFRENIERGVATDLLDTRLVD 122 Query: 126 -EEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY 184 + + ++ +RD F Y A++ L +Y ++ GE E Q ++ VA L Sbjct: 123 RFDLDALAEYLAPERDEHFEYLAMETLYQRYFLRTND-GEHLELPQAFWMRVAMGLAVEE 181 Query: 185 PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAI 244 K FYD +S + + TP + T Q SSC L D L+ I Sbjct: 182 DDPN--ARAKEFYDVLSKLEFTPSTPTLFHSGTTHPQLSSCYLTTVPDDLEGIFDAYKHH 239 Query: 245 VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL 304 + G+G + +RA G+ I TG +PF + + ++ G R GAA Sbjct: 240 AQLSKWSGGLGNDWTPLRAEGALIESTGVESTGVVPFLRISNDVTAAINRSGKRRGAACA 299 Query: 305 FYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGL 364 + +WHL+ + + LK G E R M+ I L R+ GE TLFSP +V L Sbjct: 300 YLAIWHLDFPAFVDLKRATGDERRRTPDMNTAAWIPDLFMERVQAGESWTLFSPDEVGDL 359 Query: 365 YDAFFADQEEFERLYTKYEKDDSIR-KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTH 423 ++A E R Y + ++ I + V+A EL+ ++ TG ++ D CN Sbjct: 360 HEATGEAFAEKYREYEQAAENGDIENFETVEAAELWRTLLTRLFETGHPWVTFKDPCNIG 419 Query: 424 SPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDEL 478 SP +R SNLC EI L T E A+C L + N + D L Sbjct: 420 SP-QDHEGTIRSSNLCTEITLNTS--------TDEHAVCNLGSVNFATHMRDGELDRDYL 470 Query: 479 EELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 E+ A+R LD ++D YP A+ M R +G+G + F L + G + A Sbjct: 471 EDTVETAMRMLDNVVDLCFYPTEEAEDSNMRHRPVGLGTMGFHEALMEIGVPMNSNEAVE 530 Query: 539 LTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDT-----IANE 593 ++ E + Y+ ++ S+ELA E+GA P F + + + ILP DT + Sbjct: 531 KANRWQEFVAYHAIRTSSELAGERGAYPSFEGSKWDRDILPQDTVDLLEEERGREIPTER 590 Query: 594 PLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGIL- 652 +W+A+R+SI HG+RNS A+ P+ T S I+ T IEP + +K++ G Sbjct: 591 TETLEWDAVRKSIAEHGMRNSNTMAIAPTATVSTINGTTASIEPQYSNLYVKSNMSGDFT 650 Query: 653 -------------------------------RQVVPDYEHLHDAYELLWEMPGNDGYLQL 681 +++ E L + Y +E+ L+L Sbjct: 651 IVNDHLVADLRERDLWDDEMRDRIKYHDGSIQEIEAIPEDLRELYRGAFEID-PRHQLRL 709 Query: 682 VGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDA 741 Q +IDQS+S N + + L TA++ G+KT YY T ++ Sbjct: 710 TAHRQTWIDQSVSHNVFFPSTDGTL-------LDDIYTTAWELGLKTTYYLRTLGASQVE 762 Query: 742 QDDLVPS 748 + L S Sbjct: 763 KSTLDLS 769 >UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Bacteria RepID=B0RGP9_CLAMS Length = 834 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 188/801 (23%), Positives = 345/801 (43%), Gaps = 72/801 (8%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVS--ISQVELRSHIQFYDGIKTSDIHE 60 ++ V KRDGS E + ++I+ ++ A +GL ++Q+ I +DGI T + E Sbjct: 1 MSITVVKRDGSKEPYDANRINLAIEDATQGLDENIGWVTQIASELEITLFDGITTQQLDE 60 Query: 61 TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPAL-----YDHVVKMVEMGKY 115 +I+ A + +D P + +AARL + + K+ G + P +H + ++ G Sbjct: 61 AVIQVALQNV-KDDPAFDTVAARLLLKTIYKRVLGDYSSPEELKRLHAEHFARNIQRGVD 119 Query: 116 DNHLLEDYTE-EEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYI 174 + L + + +++ ++ D Y V L +Y ++ R G+ E Q+ ++ Sbjct: 120 EMLLDSRLVQLFDLERLAQALEPAHDELLKYIGVVTLNNRYGIKGR-NGDALEVPQYFWM 178 Query: 175 LVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSL 234 +A L N T + FY+ +S + + T Q ++C ++E D + Sbjct: 179 RIAMGLTLNEQNPT--ETAIAFYEKMSKLEYLAAGSTLVNAGTIYPQLANCFVMEMQDDI 236 Query: 235 DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQ 294 + I T+ ++ GIG++ ++RA GSPIR TG IPF + +++ S+ Sbjct: 237 EHIAKTTRDVMWLTKGTGGIGLSVSKLRAQGSPIRSNNTTSTGPIPFMHTIDSVLRAVSR 296 Query: 295 GGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDIT 354 GG + GA + WHL+ L L+ N G R R + V I+ R+ ED Sbjct: 297 GGKKFGALCFYMENWHLDFPEFLDLRQNSGDPYRRTRTANTAVWISDEFMKRVQNDEDWY 356 Query: 355 LFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK-QRVKAVELFSLMMQERASTGRIY 413 LF P +V L + + E Y + IR +R+ A E F ++ +T + Sbjct: 357 LFDPLEVSDLNELYGKAFSERYAFYVGEAEAGRIRMFKRINAREQFKSILISLQTTSHPW 416 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN 473 + D N + + + SNLC EI LP + +++C L++ NL Sbjct: 417 LTWKDTINNRA-LNNNTGTIHLSNLCTEITLP--------QDEDNVSVCNLASINLSQHF 467 Query: 474 -----NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHG 528 + ++E+ A LAVR LD L+D + A R +G+GV+ F + K G Sbjct: 468 ADGKVDFAKIEQSARLAVRQLDNLIDITRSSVKEADFSNQQNRAVGLGVMGFTDIVEKLG 527 Query: 529 KRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTY----- 583 Y + +L + E + Y + S +LAKE+GA P F + +++G++P+D+ Sbjct: 528 FSYESEESYDLIDEIMEHVSYAAIDESADLAKERGAYPNFEGSRWSEGLVPLDSIALMEA 587 Query: 584 KKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVS 643 + + N DW+ALR + G+RN+TL A+ P+ + ++ T G++P + Sbjct: 588 DRGVPVKVNRTTRLDWDALRAKV-KGGMRNATLMAIAPTASIGLVAGTTPGLDPQFSQIF 646 Query: 644 IKASKDGILRQVVPD-------------------------------YEHLHDAYELLWEM 672 +++ G +V + +H+ Y +++ Sbjct: 647 SRSTSSGKFLEVNRNLVKDLQELGIWETVRENILRSQGDIQNIAAIPDHVKATYRTSFQL 706 Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQ 732 +L++ QK+IDQ+IS N + + ++ ++ GVKT YY Sbjct: 707 S-PYAFLEVAARAQKWIDQAISRNMYLETRD-------LGDMMDIYFAGWERGVKTTYYL 758 Query: 733 NTRDGAEDAQDDLVPSIQDDG 753 + + Q + D Sbjct: 759 HMKPRHTAEQSTVKVDKSQDA 779 >UniRef50_Q7T6Y8 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=RIR1_MIMIV Length = 881 Score = 655 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 187/789 (23%), Positives = 325/789 (41%), Gaps = 77/789 (9%) Query: 10 RDGSTERINLDKIHRVLDWAAEGLHNV--SISQVELRSHIQFYDGIKTSDIHETIIKAAA 67 +GS + I + I ++ E + I ++ + DI II A+ Sbjct: 74 HNGSIQVITSEIIRTYVEKIFEKMEVTHLDIDKMTKNIFPKLKSINTIKDIDNQIISTAS 133 Query: 68 DLISRDAPDYQYLAARLAIFHLRKKAYGQF--EPPALYDHVVKMVEMGKYDNHLLEDYTE 125 ++++ D DY +A + + +L F LY++ + + + + ++ + Sbjct: 134 EMVT-DHYDYPKIAVWILMTNLHDNTSDDFLETAEKLYNNKSESNKNAPIISENIYNFIK 192 Query: 126 EEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP 185 + K+++ I +DRD + + LE YL + + +I E Q L++ VA L Sbjct: 193 KHIKEINRVIRYDRDYNLTIFGFRTLEKSYLKR--INKKIVERPQHLFMRVAITLH---Y 247 Query: 186 RETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIV 245 R+ L + Y +S + TP + T Q SSC L+ GDSL+ I+ Sbjct: 248 RKNDLDRIFETYKYLSKGYFTHATPTLFNAGTTHEQLSSCFLLGIGDSLEEISECWKECA 307 Query: 246 KYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLF 305 GIGI+ IR G+ I + G + F + +QGG R G+ +F Sbjct: 308 LISKHAGGIGIHMTNIRVEGAYIASTQGEAGG-LRVLTIFNDISRYANQGGKRPGSFAIF 366 Query: 306 YPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLY 365 WH ++ L LK N G E R R + G+ IN + R+ K + +L PS P L Sbjct: 367 IEPWHGDIFFFLDLKKNTGAETERARDLFLGLMINDIFMERVYKDDVWSLMCPSQCPNLL 426 Query: 366 DAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP 425 + + +EF + Y KYE + I ++++A++L+ +M+ + TG Y+ D N S Sbjct: 427 NKY---GDEFTKEYLKYESEG-IYLKQIRAIDLWFKIMESQIETGVPYVMFKDAINDKSN 482 Query: 426 FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------NNLD 476 I V SNLC EI + ++C LS+ L N Sbjct: 483 -QINIGVVNGSNLCCEIVEVSDKN--------NFSVCNLSSICLPRFVKIIDEVPTFNYQ 533 Query: 477 ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 +L +++ + R L+ ++D YP+ + + R +GIGV A A + A Sbjct: 534 KLFKISRILTRNLNNIIDINFYPLDKTRITNLRDRPIGIGVQGLADVFAMFKTPFDSEIA 593 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 +L K FE I Y L SN+LA+E G + + ++G D + D ++ Sbjct: 594 RDLNRKIFETIYYGALTESNKLAREFGTYQTYQGSPISQGKFQFDLWNFDKSQLSG---M 650 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV 656 +DWE LR+ I HG+RNS ++ MP+ ++SQI IEP + +++ G + Sbjct: 651 WDWELLRQEILNHGVRNSLVTTCMPTASTSQIMGWNECIEPYTENIYSRSTMAGEYFVIN 710 Query: 657 --------------------------------PDYEHLHDAYELLWEMPGNDGYLQLVGI 684 +++ Y +WE+P +++ Sbjct: 711 KHLIKDLIELGVWNSEMVDLIKYYKGSVANIPNIPDNIKAIYRTVWEIP-QKSIIEMAAD 769 Query: 685 MQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQD 743 F+DQ+ S N D F L L A++ G+KT +YY ++ + Q Sbjct: 770 RAPFVDQTQSMNLYIDKPSFAR-------LNSCLFYAWRKGLKTGMYYLRSKPASSANQF 822 Query: 744 DLVPSIQDD 752 + + Sbjct: 823 GIDIDKIKE 831 >UniRef50_B7FY00 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillariophyta RepID=B7FY00_PHATR Length = 926 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 206/794 (25%), Positives = 334/794 (42%), Gaps = 97/794 (12%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVEL--RSHIQFYDGIKTSDIHET 61 L V+KRDG E ++ K+ + L ++GL ++ V L Y + T +I Sbjct: 66 TLHVSKRDGRLELLDSTKLLQRLTDLSDGLDMRFLNLVALTESIVRGMYPNVTTHEIDVL 125 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGK-YDNHLL 120 + AA L ++ PDY LAAR+ I K F + + + GK + +H + Sbjct: 126 AAETAASLGTQ-HPDYGRLAARILITQNHKTTPTCFS-----EAIETLYNSGKGFIDHKV 179 Query: 121 EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL 180 + ++D+ I H+RD+ +Y K LE YL++ ++ E Q+L + VA + Sbjct: 180 GELVRRRGPEIDSRIVHERDLEMTYFGYKTLERAYLLKKDNGNQVLERPQYLMMRVALGI 239 Query: 181 FSNYPRETR-----LQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSL 234 +R L+ YD +S + +P + T Q SSC L++ DS+ Sbjct: 240 HCTSKMSSRSEDDCLEAAFETYDLMSRGFFTHASPTLFHAGTTHPQLSSCFLVQMSEDSI 299 Query: 235 DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQ 294 + I T GIG++ IRA G+PI+G G +P + F + Q Sbjct: 300 NGIYDTLKRCAVISKAAGGIGLSVHNIRARGTPIQGTRGVSNGLVPMLRVFDVTSRYVDQ 359 Query: 295 GG-VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDI 353 GG R GA ++ WH ++ +L LK N G E R R + YG+ I L R+ + + Sbjct: 360 GGGKRPGAFAIYLEPWHADIFDVLSLKKNHGKEEQRARDLFYGLWIPDLFMKRVEEDDVW 419 Query: 354 TLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIY 413 +L P PGL + +FE LY YE++ ++V+A EL+ +++ + TG Y Sbjct: 420 SLMCPHQCPGLAHCY---GAKFEALYQHYEQEGKFV-RQVRARELWGAILESQIETGTPY 475 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL---- 469 + D CNT S I ++ SNLC EI + + E A+C L++ L Sbjct: 476 MLYKDTCNTKSNQQ-NIGTIQCSNLCTEIIQYS--------DQEETAVCNLASICLPRFV 526 Query: 470 ---------------GAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLG 514 A + + L A + R L++++D YP+ AK R +G Sbjct: 527 VSERGTFGSISPESGSAFFDHEALHRAAKIVTRNLNSIIDVNSYPVDGAKTSNFKHRPIG 586 Query: 515 IGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYA 574 IGV A + G ++ +A L FE I + L+AS ELA+++G F + + Sbjct: 587 IGVSGLADAFLRLGLPFTSAAAKKLNEAIFETIYHAALEASAELAEKEGPYETFAGSPAS 646 Query: 575 KGILPIDTYKKDLDTIANEPLHY--------------------DWEALRESIKTHGLRNS 614 +G L + + D + DWE+LR I GLRNS Sbjct: 647 QGKLQFNLWGLSDDETPSHKYALAKETPVPIQMYPNSSNVCGYDWESLRRRIVKTGLRNS 706 Query: 615 TLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPG 674 A S + S +S T ++ G ++ + + L + Y+ +WE+ Sbjct: 707 LSWA---STSVSSLSAQT------FRNQMMR--DGGSVQNIPDIPDRLKELYKTVWEIKM 755 Query: 675 NDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQN 733 D + + KFIDQ N N D +L A+K G+KT +YY Sbjct: 756 KD-IIDMGADRGKFIDQ----NPNMD------------KLTAMHFYAWKKGLKTGMYYLR 798 Query: 734 TRDGAEDAQDDLVP 747 T+ Q + Sbjct: 799 TKPAVNAIQYTVEK 812 >UniRef50_P74240 Ribonucleoside-diphosphate reductase subunit alpha n=12 Tax=Cyanobacteria RepID=RIR1_SYNY3 Length = 767 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 211/768 (27%), Positives = 349/768 (45%), Gaps = 44/768 (5%) Query: 4 NLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETII 63 + V +RDGS+ +N+ KI V+DWA GL V+ +E + +GI T +I + +I Sbjct: 30 RIQVIRRDGSSTPLNIGKIRAVVDWACLGLE-VNSIALEAGLTTRLREGISTREIQDNLI 88 Query: 64 KAAADLISRDAPDYQYLAARLAIFHLRKKAY--GQFEPPALYDHVVKMVEMGKYDNHLLE 121 A ++ S + PD++Y+A RL ++ L K ++ V V G+YD+ +L Sbjct: 89 SCALEMCSPNEPDWRYVAGRLHVWSLWKDTLVRRGYQYGQYLRTVQTKVTNGEYDSRIL- 147 Query: 122 DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF 181 Y+E E ++ +I+ D D + YA L +YL+ N E Q + A L Sbjct: 148 TYSEGELQEAGCWINSDWDTDYDYAGAVLLTSRYLLPN-------ELPQEALLTCALLLA 200 Query: 182 SNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATS 241 S + RLQ+ +RFY++++ +ISL TPI++ +R P +SC ++ D+L+SI Sbjct: 201 SVEAPDRRLQWARRFYESIAARRISLATPILANLRVPGGSLTSCFIVAMEDNLESIFGEI 260 Query: 242 SAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGA 301 + + G+G+N RIRA GS + G G IP+ K + +QGG R GA Sbjct: 261 TNAARISKNGGGVGVNVSRIRATGSWVMGKPNASGGVIPWTKLLNDTAIAVNQGGRRAGA 320 Query: 302 ATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDV 361 T+ +WHL+V L ++ G + + + + + R++ ED TL P +V Sbjct: 321 VTVGLDVWHLDVPEFLEMQAENGDQRRKAYDIFPQLILPDEFMRRVINKEDWTLVDPYEV 380 Query: 362 PGLYDAFFAD--QEEFERLYTKYEKD---DSIRKQRVKAVELFSLMMQERASTGRIYIQN 416 A+ E+FE Y + E + +R+ A ELF +M+ + TG Y+ Sbjct: 381 REKMGIELAELWGEQFEGAYREIESNLDTTITLYKRINARELFKQIMRTQVETGMPYLSF 440 Query: 417 VDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLD 476 D N +P + + + +NLC E P D + C L + NL + +L Sbjct: 441 KDTINKANP-NKHLGYIPGTNLCCESFSNVTPGQDAH-------CCNLVSLNLANL-DLQ 491 Query: 477 ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 ++ ++ +AVR LD ++ P AK RT+G+G + A +LAK Y + Sbjct: 492 DIAGVSQIAVRMLDNTIELTAPPFADAKSHNNKYRTIGVGAMGLADWLAKRRLNYDE--- 548 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 ++ FE I Y+ ++S ELAKE+GA P F + + KG+L A +P Sbjct: 549 LADINRLFEEIGYWCTQSSMELAKERGAYPAFPGSDWQKGLLIGSKPVSWFQANAAKPER 608 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV 656 WE L I+THG+RNS ++A+ P+ +SS + T I P G + Sbjct: 609 --WEKLSNDIQTHGIRNSHITAIAPNTSSSLVQGCTASILPVYSRFFYDKWAKGTVPIAP 666 Query: 657 PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYD------PSRFPSGKVP 710 P + Y M ++ V +Q++ D IS ++ P + Sbjct: 667 PFIGNCFWFYPENKTMD-QRKVVKAVAAIQQWTDTGISMELLFNLNAGIYFPEEPERSLN 725 Query: 711 MQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 + + L+ A++ G K +YY T DGC + A Sbjct: 726 AKDIFDTLVMAWEAGCKAIYYIRTVQ-------KDDFKDSSDGCVACA 766 >UniRef50_C4V8X4 Ribonucleoside-diphosphate reductase n=1 Tax=Nosema ceranae BRL01 RepID=C4V8X4_NOSCE Length = 800 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 178/824 (21%), Positives = 331/824 (40%), Gaps = 110/824 (13%) Query: 3 QNLLVTKRDGSTERINL-------DKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKT 55 + K ST+++ +K + + ++I + L+ D I Sbjct: 20 MQFNIHKISKSTDKLTPCIYQQFKNKFKKYISDL--DSRFIAIDEYFLKIESGLCDDITV 77 Query: 56 SDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKY 115 + + A + ++ DY +A++ + +L++ F + V + + G + Sbjct: 78 EEFISFAAETADSMTTK-HYDYGRFSAKILMEYLKENTLDSF-----FAKVDYIYKNGDF 131 Query: 116 DNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYIL 175 + + + K +D +D+ +D +++Y A+ L+ YL+ + G+ E Q + + Sbjct: 132 YSEKFYNIVLDNKKFLDELVDYSKDDSWTYFAILTLKRAYLLT--LDGQTIERPQDMLLR 189 Query: 176 VAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLI-ECGDSL 234 VA L L+ VK Y+ +S + +P + + Q +SC L+ +++ Sbjct: 190 VAVQLHG-----DNLENVKETYELLSNNMYTHGSPTIFNSGSKKSQLASCFLLTPIEETV 244 Query: 235 DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQ 294 + + T V+ G+ ++ + A G+ IR G IP+ + ++K Q Sbjct: 245 EGLFETVKRCVQISKSGGGVALDLHDMAAKGTSIRKTGGISKGIIPYIQVLNWSLKYIGQ 304 Query: 295 GGVRG-GAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDI 353 G R G ++ WH ++ L L+ + G + R R + G+ IN L R+ ED Sbjct: 305 AGSRRSGCPAIYLEPWHKDIFDFLDLRKSIGKDELRARDVFTGMWINDLFMKRVEANEDW 364 Query: 354 TLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIY 413 +LF P VPGL +A+ +EFE +Y +YEK + V A +++ +++ + TG Y Sbjct: 365 SLFCPKSVPGLSNAY---GKEFEDMYLEYEK--KVDCVVVPAQKVWKAIIESQIETGTPY 419 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI- 472 + D N S I +R SNLC EI T P E+A+C L++ L Sbjct: 420 MLYKDTINNLSN-QKNIGTIRCSNLCTEIVQYTSP--------DEVAVCNLASICLPKFV 470 Query: 473 ----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHG 528 + + + + + + + ++D YP+ A++ R +G+GV A Sbjct: 471 INGEFDFNLFKSVVKIVTKNANIVIDCNFYPLKEAEKSNKKHRPIGLGVQGLADVFLMLR 530 Query: 529 KRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLD 588 Y A L + FE + + L++S E A++ G +N + +KGI + Sbjct: 531 LPYESEGARKLNKEIFETLYFGALESSCEEAEKYGPYESYNGSPISKGIFHWEM------ 584 Query: 589 TIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 ++ ++WE LR+ I +G+RNS L A MP+ +SQI N EP + + + Sbjct: 585 ANSSTTGRWNWEELRKKILKYGVRNSLLIAPMPTAGTSQIFNNNEAFEPFTSNIYTRRTA 644 Query: 649 DGILRQVVPD--------------------------------YEHLHDAYELLWEMPGND 676 G + V E + + Y+ +WE+ Sbjct: 645 CGEFQMVNRYLMNDLIKLNMWSPEIKNYIVEQEGSIQNISGIPEEIKELYKTVWEIKM-K 703 Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTR 735 + L Q F+DQ+ S N +P L +K G+KT +YY TR Sbjct: 704 CVIDLAADRQAFVDQTQSLNLFVAKPTYPI-------LSSMHFYGWKRGLKTGMYYLRTR 756 Query: 736 DGAEDAQDDLVPSI--------------------QDDGCESGAC 759 + + + + D CES +C Sbjct: 757 PITSAIKFTVDLDMLKKVEKNEATNEELKENEINKSDICESCSC 800 >UniRef50_O12935 Ribonucleoside-diphosphate reductase n=1 Tax=Spodoptera exigua MNPV RepID=O12935_9ABAC Length = 770 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 176/803 (21%), Positives = 306/803 (38%), Gaps = 101/803 (12%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDI 58 ++ + + +E + L +L+ + + V + ++ + + D I I Sbjct: 9 IDSKFKIIPSNNVSENLTL-----LLNSLCKNIDTRYVDVPKLVHKVVAESGD-IGFDKI 62 Query: 59 HETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNH 118 AA + DY LA R+ + L K F A + + Sbjct: 63 KLYCADVAASMT-YVHYDYALLAGRILVEDLHSKVSSCFVTIA-----NDLFSRNVLSDE 116 Query: 119 LLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 ++ ++ I H+RD + Y K L YL++ + I E Q + + VA Sbjct: 117 -FNQLVKKHGAILNNEIKHERDYNYKYFGFKTLTNGYLLK--IDDVIMERPQHMLMRVAL 173 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSI 237 + ++ V Y +S + +P + T +Q SC L DS+D I Sbjct: 174 AIHG-----DDVKSVIETYQLMSLGTFTHASPTLFSAGTRRQQMCSCFLQSIKDDSVDGI 228 Query: 238 NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV 297 T + G+G++A + +G + + F V+ QGG Sbjct: 229 YKTLHESALISNLGGGLGLSA----------QNSGG--SGLVNMLRVFNNMVRHVDQGGK 276 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R GA + WH E+ L L+ N G E + R + G+ I L R+ + +LFS Sbjct: 277 RKGALAAYIEPWHPEIYEFLNLRRNMGSEDTKARDLMLGLWIPDLFMKRVKNNQMWSLFS 336 Query: 358 PSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417 P L D + D FE Y YE + + +++VKA +LF +++ TG Y+ Sbjct: 337 HKTCPDLADKYGFD---FEMRYCDYE-NAQVYERQVKARDLFRFIVETNVETGGPYMLYK 392 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDE 477 DHCN S + ++ SNLC EI E A+C L++ + ++D Sbjct: 393 DHCNNFSN-QKNLGTIKCSNLCAEIVQYCDEN--------ETAVCNLASIAVNKCVDVDA 443 Query: 478 -------LEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530 L+ L + VR L+ ++D YP ++R R +G+G+ A Sbjct: 444 KTFDYVLLKHLTKIIVRNLNKIIDVNHYPTAESERSNKKHRPIGVGIQGLADAFVLLDIA 503 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTI 590 Y A + + E I + L+AS ELAK G + ++ ++GIL Y D + + Sbjct: 504 YDSDDARFVNYSIAETIYFAALEASCELAKINGPYESYTDSPVSRGILHFHNYD-DENGV 562 Query: 591 ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG 650 + +DW L+ +I +G+RNS L A MP+ T++QI EP V ++ G Sbjct: 563 YHSNNLWDWNELQCNINKYGVRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAG 622 Query: 651 ILRQVVPD--------------------------------YEHLHDAYELLWEMPGNDGY 678 + V +H+ + ++ WE+ Sbjct: 623 EFQVVNQYLVKALIDLDIYTPELRNKILAENGSVQNIDEIPQHVKNLFKTAWEIKS-KCI 681 Query: 679 LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDG 737 + + FIDQS S N + A++ +KT +YY T+ Sbjct: 682 INMAADRAPFIDQSQSLNLFVAEP-------TYSVVSSIHFYAWEKKLKTGMYYLRTKPA 734 Query: 738 AEDAQDDLVPSIQDDGCESGACK 760 A+ + + + S + K Sbjct: 735 AQATKFTVD----VETVASCSKK 753 >UniRef50_B9L2K7 Ribonucleoside-diphosphate reductase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K7_THERP Length = 770 Score = 642 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 199/740 (26%), Positives = 319/740 (43%), Gaps = 66/740 (8%) Query: 56 SDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKY 115 +++ I+ L D P+ + AA L + + ++A P +H + VE G Sbjct: 20 AELDSRILSCLQQL--PDRPEAEREAAALLLEKIAREA-DDGTPLPYPEHFRRFVERGIA 76 Query: 116 DNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYIL 175 L + + +D RD YAA+ L +YLV++ T ++ E Q L++ Sbjct: 77 RGALDPRLRTFQLDVLARALDPARDALLGYAALATLADRYLVRDPETRQLLERPQALFMR 136 Query: 176 VAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLD 235 VA L P ETR + R+YD +S+ + TP + TP Q +SC L E DSL+ Sbjct: 137 VAMGLALVEPPETRTSWALRWYDLMSSLRYLPSTPTLFNAGTPHHQLASCYLAEVEDSLE 196 Query: 236 SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQG 295 SI ++ GIG RIRA G+P+RG G IPF + + S SQG Sbjct: 197 SILGSAYEFGMLAKYAGGIGTAVTRIRATGAPVRGINGTSGGLIPFLHLYDALIASISQG 256 Query: 296 GVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITL 355 G R G ++ WHLEVE+ L L+ N G R ++ + I R+ + L Sbjct: 257 GRRRGTMCVYLEPWHLEVEAFLDLRRNAGDPYRRTHQLNTALWIPDEFLRRVETDDLWYL 316 Query: 356 FSPSDVPGLYDAFFADQEEFERLYTKYEKDD---SIRKQRVKAVELFSLMMQERASTGRI 412 F P P L D A E R + + +R+ A EL+ ++ TG Sbjct: 317 FDPIVAPELPDLVGAAFSERYRELCRQAEAGMLPRRAWRRLPARELWLAILASLMETGHP 376 Query: 413 YIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI 472 ++ D N S I + SNLC EI LPT E+A+C L + NL Sbjct: 377 WLTFKDAGNLRSQLR-GIGVIHSSNLCTEIFLPTS--------RDEVAVCNLGSVNLARH 427 Query: 473 N------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAK 526 + ++L LA+RALD ++D YP A R R +G+G++ FA LA+ Sbjct: 428 CTPTGELDWEQLAATVRLAMRALDNVIDANLYPSERAARANQLNRPVGLGLMGFAELLAR 487 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKK- 585 Y++ +A +L + E + Y+ + AS LA+E+GA P F + +A G+LPIDT + Sbjct: 488 RAVSYAEPAAADLADQIAEFLSYHAISASCALAEERGAFPNFAFSRWAAGVLPIDTLDEL 547 Query: 586 ----DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGY 641 L + DWE LR+ ++ G+RN + A+ P+ T + ++ T ++P Sbjct: 548 AADRGLPVEVDRTRRLDWEPLRQRVRR-GMRNGAVMAVAPTATIALLAGTTPSLDPYYAN 606 Query: 642 VSIKASKDGILRQVVPD-------------------------------YEHLHDAYELLW 670 V + + G +V P L + + Sbjct: 607 VFSRQTLSGKFLEVNPILVEELRRRGLWEQLLPGLVAARGDLRAVPGCPPDLVARFPTAY 666 Query: 671 EMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLY 730 ++P + Y+++ +QK++D +S N + R Q+ L A++ G+K+ Y Sbjct: 667 QVPA-ESYIEVAARVQKWVDMGVSRNLYHAADRP-------GQMSAVYLAAWRKGLKSTY 718 Query: 731 YQNTRDGAEDAQDDLVPSIQ 750 Y R E Q + + Sbjct: 719 YCFVRPRMEIEQSTVAVNKA 738 >UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Bacteria RepID=C8WK91_EGGLE Length = 845 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 182/749 (24%), Positives = 329/749 (43%), Gaps = 54/749 (7%) Query: 34 HNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKA 93 ++ + + + ++KAA +L +++AP ++ +AARL + + Sbjct: 126 EEYELAHLSAKFQSFAKPDAADGQLLAMLVKAAVELTTQEAPRWEIIAARLLMVQFDRAL 185 Query: 94 YGQF---EPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150 + V + E G Y +++L+ YT E + FID R+ F+YA ++ Sbjct: 186 AERLAARHIETFAQKVAFLTEEGLYGDYILQHYTPAELDEAAGFIDLSRNDLFTYAGLQL 245 Query: 151 LEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTP 210 L +Y+++ G ES Q +++ +A L R+ +V+RFYD +ST K+++ TP Sbjct: 246 LLDRYVIRTH-QGAPLESPQEMFLGIALHLAMEERASERMGWVRRFYDMLSTLKVTMATP 304 Query: 211 IMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRG 270 +S R P Q SSC + DSLD I + K G+G+ G++RA GS IRG Sbjct: 305 TLSNARKPFHQLSSCFIDTVPDSLDGIYRSIDNFAKVSKYGGGMGLYFGKVRASGSAIRG 364 Query: 271 GEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRV 330 + G I + + + Q G+R GA ++ WH ++ L L+ N G + + Sbjct: 365 FDGAAGGVIRWIRLANDTAVAVDQLGMRQGAVAVYLDAWHRDLPEFLALRTNNGDDRMKA 424 Query: 331 RHMDYGVQINKLMYTRLLKG--EDITLFSPSDVPGLYDAFFAD--QEEFERLYTKYEKDD 386 + V + + D L P ++ + D EE+ R Y + D Sbjct: 425 HDVFPAVCYPDYFWQQARDNIEGDWYLMCPHEILTVKGYALEDCYGEEWTRKYLECVADA 484 Query: 387 SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPT 446 I+K+ + ++ L+++ TG + N D N +P + + SNLC EIA Sbjct: 485 RIKKRAIPIKDVIRLIIKSAVETGTPFTFNRDAVNRANP-NKHRGMIYCSNLCTEIAQNM 543 Query: 447 KPLNDVN---------------DENGEIALCTLSAFNLGA--INNLDELEELAILAVRAL 489 + + + G +C L++ +LG +++ EL + AVRAL Sbjct: 544 GAIEQLEQRIEDVDGEQVVVTVTKPGAFVVCNLASLSLGHIDMDDPHELAHVTESAVRAL 603 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 D ++D +P+P A+ R +G+GV + + LAK G R+ + F + Y Sbjct: 604 DNVIDLNFFPVPYAEINNRQYRPIGLGVSGYHHLLAKSGIRWESEEHLAFAERVFGDVHY 663 Query: 550 YLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH 609 ++AS +A+E+GA +F + + G D W L + H Sbjct: 664 AAVRASCAIAREKGAYGFFEGSGWQTGEYFRD----------RGLTDGRWAELARDVAEH 713 Query: 610 GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELL 669 GLRN L A+ P+ ++S I+ T G++P ++ K+G++ +V P+ Y Sbjct: 714 GLRNGYLLAVAPTSSTSIIAGTTAGLDPVMNRYFLEEKKNGLMPRVAPELSMDTFWYYKN 773 Query: 670 WEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL 729 + ++ G+ Q+ IDQ+ S N + + +++L L A++ GVKT+ Sbjct: 774 AHLIDQTWSVRACGVRQRHIDQAQSMNLYI------TNEYTFRRVLDLYLLAWEEGVKTI 827 Query: 730 YYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 YY ++ S++ + CE + Sbjct: 828 YYVRSK------------SLEVEECEVCS 844 >UniRef50_C9KMB2 Ribonucleoside-diphosphate reductase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB2_9FIRM Length = 755 Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 184/752 (24%), Positives = 329/752 (43%), Gaps = 54/752 (7%) Query: 31 EGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLR 90 G H S + + + ++ ++ + +++AA +L S +AP + +AARL Sbjct: 33 FGEHAGDFSALVEKYEVFVKPSLQAAEKLQALVRAAVELASAEAPHWDKIAARLRYLVFA 92 Query: 91 KKAYGQFE---PPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAA 147 ++ + + G Y +++LE YTE E F+ +R+ ++YA Sbjct: 93 RQLSEDEARRGITNFVAKLRYLTAKGLYGSYILEHYTERELSAAARFMAEERNHLYTYAG 152 Query: 148 VKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISL 207 + L +Y++ G ES Q +Y+ +A L R+ +V+RFYD +S ++++ Sbjct: 153 LDLLLSRYVIHTH-HGVALESPQEMYLGIALHLAMLELPAVRMDWVRRFYDMLSLQQVTM 211 Query: 208 PTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSP 267 TP ++ R P Q SSC + DSL+ I + + K G+G+ G++RA G+ Sbjct: 212 ATPTLANARKPYHQLSSCFIDTVPDSLEGIYRSLDSFAKVSKWGGGMGLYFGKVRATGAA 271 Query: 268 IRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEG 327 IRG E G I + + + Q GVR GA ++ WH ++ L L+ N G + Sbjct: 272 IRGFEGAAGGVIRWIRLVNDTAVAVDQLGVRQGACAVYLDAWHKDLPEFLQLRTNNGDDR 331 Query: 328 NRVRHMDYGVQINKLMYTRLLK--GEDITLFSPSDVPGLYDAFFAD--QEEFERLYTKYE 383 + + V L + + L P ++ + D EE+E+ Y Sbjct: 332 MKAHDIFPAVCYPDLFWKLAKEDLDAPWFLMDPHEIEMVMGYALEDFWGEEWEKRYRACV 391 Query: 384 KDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIA 443 + I K+ + E+ L+++ TG + D N +P +P + SNLC EIA Sbjct: 392 AEPRIDKRVISVKEIVRLILKSVVETGTPFAFYRDTVNRLNP-NPQAGMIYCSNLCTEIA 450 Query: 444 LPTKPLNDVNDE---------------NGEIALCTLSAFNLGAIN--NLDELEELAILAV 486 P+ V+ E G+ +C L++ NLG I+ + +EL + AV Sbjct: 451 QNMSPVEAVSTEIRTKDGDTVVQVTTRPGDFVVCNLASLNLGRIDVTSHEELRTVVRTAV 510 Query: 487 RALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA 546 RALD ++D + P+ AK R++G+GV + + LAK+ R+ F Sbjct: 511 RALDNVIDLNEAPLAYAKLTNAKYRSIGLGVSGYHHMLAKNAIRWESEEHLAFVDDVFAR 570 Query: 547 IQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESI 606 I Y ++AS++LA E+G F + + G + W+ L + Sbjct: 571 INYAAIEASSDLAAEKGTYGCFAGSDWQTGAYF----------KKRGYMSEAWQKLAAKV 620 Query: 607 KTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAY 666 + G+RN+ L A+ P+ ++S + T G++P ++ K IL ++ PD Y Sbjct: 621 RAQGMRNAYLLAVAPTSSTSILVGTTAGVDPIMKRFFLEEKKGAILPRIAPDLSMKTYWY 680 Query: 667 ELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGV 726 + ++ G+ Q+ IDQ+ S N + +Q+L + AY+ GV Sbjct: 681 YKSAHTVDQNWSVRAAGVRQRHIDQAQSVNLYI------TNDFTFRQVLALYIRAYEEGV 734 Query: 727 KTLYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 KT+YY ++ S++ + CES + Sbjct: 735 KTIYYVRSK------------SLEVEECESCS 754 >UniRef50_B7SW23 Ribonucleoside-diphosphate reductase n=1 Tax=Spodoptera litura nucleopolyhedrovirus II RepID=B7SW23_9ABAC Length = 904 Score = 636 bits (1640), Expect = 0.0, Method: Composition-based stats. Identities = 180/777 (23%), Positives = 292/777 (37%), Gaps = 97/777 (12%) Query: 36 VSISQVELRSHIQFY-DGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAY 94 V + ++ + +G+ + AA + DY LA R+ + L K Sbjct: 170 VDVPKLMQKIKESINENGVSFEQMKLYCADVAASMT-YIHYDYALLAGRILVEDLHNKVC 228 Query: 95 GQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGK 154 F Y +V +H + + ++ I H+RD + Y K L Sbjct: 229 PCFVEVTNYLAQNNVV------SHEFNNLVVKHGALLNREIKHNRDYDYKYFGFKTLTNG 282 Query: 155 YLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSG 214 YL++ V I E Q + + VA + + Y +S + +P + Sbjct: 283 YLLK--VNDVIAERPQHMLMRVALAIHG-----DDVMSAIETYQLMSLGTFTHASPTLFA 335 Query: 215 VRTPTRQFSSCVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEA 273 T Q SC L DS+D I T + G+G++ + S G Sbjct: 336 AGTCRPQMCSCFLQCIKEDSIDGIYKTLHESALISNLGGGLGLSVQSV----SAQYNGTT 391 Query: 274 FHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHM 333 G + + F V+ QGG R GA + WH E+ +L L+ N G E + R + Sbjct: 392 KSGGLVSMLRVFNNMVRHVDQGGKRKGALAAYVEPWHPEIYDVLNLRRNMGSEDAKARDL 451 Query: 334 DYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRV 393 G+ I L R+ + ++ +LF P PGL D + FE LY KYEK+ + +++V Sbjct: 452 MLGLWIPDLFMERVKENKEWSLFCPKKYPGLLDEY---GSSFEILYEKYEKN-KLYERQV 507 Query: 394 KAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN 453 KA +LF +++ TG Y+ D CN S + ++ SNLC EI Sbjct: 508 KARDLFRFIVETNVETGGPYMLYKDPCNKFSN-QKNLGIIKCSNLCAEIVQYC------- 559 Query: 454 DENGEIALCTLSAFNLGAI-------NNLDELEELAILAVRALDALLDYQDYPIPAAKRG 506 + E A+C L++ + + L L + VR L+ ++D YP A Sbjct: 560 -DKDETAVCNLASIAVNKCVNVKTKTFDYVLLNRLTKIVVRNLNKIIDSNHYPTAGAANS 618 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 R +G+G+ A Y A ++ + E I + L+AS ELAK G Sbjct: 619 NKKHRPVGVGIQGLADAFVLLDIPYDSEEARSVNYMIAETIYFSALEASCELAKIDGPYE 678 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 + + +G + D Y I ++W LRE I+ HG+RNS L A MP+ T++ Sbjct: 679 SYENSPLFRGTMHYDNYN-----IYPTDHLWNWSKLREKIQRHGVRNSLLVAYMPTATTA 733 Query: 627 QISNATNGIEPPRGYVSIKASKDGILRQVVPD---------------------------- 658 QI EP V ++ G + V Sbjct: 734 QILGNNESFEPFTSNVYLRRVLAGEFQVVNQYLIKALVDLNIYTPELRNKILAENGSVQN 793 Query: 659 ----YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL 714 +H+ D ++ WE+ + + FIDQS S N + Sbjct: 794 IDEIPQHVKDLFKTAWEIKS-KCMIDMAADRAPFIDQSQSLNLFVAEP-------TYSVM 845 Query: 715 LKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLV----------PSIQDDGCESG-AC 759 ++ +KT +YY T+ A+ Q + + DDG E +C Sbjct: 846 SSIHFYTWQKQLKTGMYYLRTKPAAQATQFTVDAEAAASCGKKRKMDDDGTEECMSC 902 >UniRef50_Q2P8D3 Ribonucleoside-diphosphate reductase n=66 Tax=root RepID=Q2P8D3_XANOM Length = 832 Score = 634 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 188/803 (23%), Positives = 333/803 (41%), Gaps = 76/803 (9%) Query: 2 NQNLLVTKRDG-STERINLDKIHRVLDWAAEGLHNVSISQVELRSH--IQFYDGIKTSDI 58 N + +TK G +++ R +D + ++ + ++ D + D+ Sbjct: 59 NVSTWITKEAGNRKIPFEPERLERAIDQIHAEFPQLDVADYKRSVFGFVERKDSVNADDL 118 Query: 59 HETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYG------QFEPPALYDHVVKMVEM 112 + +I+ A + P++++ AARL + L K+A + + + + Sbjct: 119 VDHLIREAEARVDLTTPEWEHFAARLYLRRLYKRASRNRFYDASQKYGSFVGLQESLADR 178 Query: 113 GKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFL 172 Y N +L Y+++E + I+ +RD F+Y + L +YL + G ++E Q Sbjct: 179 NVYSNDILRRYSKDELIEAGKMIEPERDKLFAYNGLYLLATRYLATDSSRG-VFELPQER 237 Query: 173 YILVAACLFSNY------PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCV 226 ++ +A L + RE R+Q V Y A+S +++ TP ++ Q SSC Sbjct: 238 WLTIALYLMQDEIGTGKGSRERRMQLVGEAYWALSNLYMTVATPTLANAGKVGGQLSSCF 297 Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ 286 + DSL I +++ + + G+G G +R+ GS IRG G +P+ K Sbjct: 298 IDTVDDSLQGIYDSNTDVARVSKHGGGVGAYLGYVRSSGSAIRGVSNSSGGVVPWIKQLN 357 Query: 287 TAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR 346 S Q G R GA ++ ++H ++E+ L L+ N G + R + V I L Sbjct: 358 NTAVSVDQLGQRKGAIAVYLDIFHRDIEAFLDLRLNNGDQRLRAHDVFTSVCIPDLFMEA 417 Query: 347 LLKGEDITLFSPSDVPGLYDAFFADQEE---------FERLYTKYEKDDSIRKQRVKAVE 397 + + D LF P +V + + D + F R Y + D+ I ++ VKA+E Sbjct: 418 VERRGDWYLFDPHEVKRVKGWYLQDFYDEKKGDANSSFRRKYEEVVADERITRKTVKAIE 477 Query: 398 LFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND--- 454 +F +M + TG ++ D N +P + V SNLC EI P + + Sbjct: 478 IFKRIMVSQLETGNPFMFYRDEVNRKNP-NKHEGMVYSSNLCTEILQNMSPTRMMQEIIS 536 Query: 455 --------ENGEIALCTLSAFNLGAINNL----------DELEELAILAVRALDALLDYQ 496 + G+ +C LS+ NLG + D LE L + VR LD ++D Sbjct: 537 GNQIVTTKKAGDFVVCNLSSINLGRAITVQADQADLLGADVLERLIPIQVRMLDNVIDLN 596 Query: 497 DYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASN 556 P+P A R +G+G + + LA+ ++ A + + + +E I Y ++AS Sbjct: 597 QLPVPQATITNQKYRAIGLGTFGWHHLLAQKAIHWNAKEAEDYSDELYERINYLTIQASM 656 Query: 557 ELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTL 616 ELAKE+G F + + G A + W L + +G+RN+ + Sbjct: 657 ELAKEKGTYSVFRGSDWHNGEYFR----------ARDYNSPQWLELSAQVAVNGVRNAWM 706 Query: 617 SALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE-HLHDAYELLWEMPGN 675 A+ P+ +++QI+ +T I+P + KD P YE Sbjct: 707 LAVAPNMSTAQIAGSTASIDPIYSAFYYEEKKDFRRPVAAPGLSLDTWPYYEKGAYKVDQ 766 Query: 676 DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTR 735 ++ Q+ +DQSIS N + + LL +TA++ G+KT YY + Sbjct: 767 FASVRQNARRQRHVDQSISFNFYVPST------IRASTLLDLHMTAWREGLKTTYYVRSN 820 Query: 736 DGAEDAQDDLVPSIQDDGCESGA 758 D I CE + Sbjct: 821 D------------IDISECEWCS 831 >UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alpha n=48 Tax=Bacteria RepID=RIR1_TREPA Length = 845 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 183/747 (24%), Positives = 336/747 (44%), Gaps = 47/747 (6%) Query: 17 INLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIH--ETIIKAAADLISRDA 74 + VL + S L S + T + + +IKAA +L +++A Sbjct: 108 FTDSSVLGVLKEIQQDFPFPEYSLDALASKFLLFKKEVTDERRSMQLLIKAAVELTAQEA 167 Query: 75 PDYQYLAARLAIFHLR---KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQM 131 P ++ +AARL + + + + Y+ + + E G Y ++ Y+ E ++ Sbjct: 168 PQWELIAARLLMLDFSLALGTSLEKLNIHSFYEKITYLEEAGLYGVYIRTHYSRAEIEEA 227 Query: 132 DTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQ 191 T+++ RD F+Y+++ + +Y+++ R E+ Q +++ +A L N + R+Q Sbjct: 228 ATYLECSRDKLFTYSSLDMILRRYVIRTRAHV-PLETPQEMFLGIALHLAMNET-QDRMQ 285 Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQR 251 +VKRFY +S ++++ TP +S R P Q SSC + DSLD I + + Sbjct: 286 WVKRFYTVLSKLQVTVATPTLSNARKPFHQLSSCFVDTVPDSLDGIYRSIDNFSQVSKFG 345 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 G+G+ G++RA+G+PIRG + G + + K + Q GVR G+ ++ +WH Sbjct: 346 GGMGLYFGKVRAVGAPIRGFQGAAGGILRWIKLANDTAVAVDQLGVRQGSVAVYLDVWHK 405 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKG--EDITLFSPSDVPGLYDAFF 369 ++ L L+ N G + + + V L + + L P ++ + Sbjct: 406 DIPEFLQLRTNNGDDRMKAHDVFPAVCYPDLFWKTVRDNLGASWYLMCPHEILTVKGYAL 465 Query: 370 ADQ--EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD 427 D EE+E+ Y KD I K+ + EL L+++ TG + DH N +P + Sbjct: 466 EDFYAEEWEKRYWDCVKDARISKRTIPIKELVRLVLKSVVETGTPFAFYRDHANRANP-N 524 Query: 428 PAIAPVRQSNLCLEIALPTKPLNDVN---------------DENGEIALCTLSAFNLGAI 472 + SNLC EIA +N V+ G+ +C L++ L I Sbjct: 525 GHRGIIYCSNLCTEIAQNMSAINLVSVKITEVDGQKVVVQTTRPGDFVVCNLASLVLSNI 584 Query: 473 N--NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530 + + EL E+ +AVRALD ++D YP+P A+ R +G+GV + + LA+ G Sbjct: 585 DLSDDKELREVVRVAVRALDNVIDLTYYPVPYAQVTNAYYRAIGLGVSGYHHVLAQQGID 644 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTI 590 + + FE I ++AS +A+E+GA F + + G Sbjct: 645 WESDEHLAFADRIFERINRAAIEASMTIAREKGAYGCFTGSDWCTGAYFR---------- 694 Query: 591 ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG 650 + DW+ L+ + THG+RN L A+ P+ ++S I+ T G++P ++ K Sbjct: 695 KRGYVSEDWQRLQREVATHGMRNGYLLAVAPTSSTSIIAGTTAGVDPIMKQYFLEEKKGM 754 Query: 651 ILRQVVPDY-EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKV 709 ++ +V P + Y+ ++ G+ Q+ IDQ+ S N + Sbjct: 755 LMPRVAPSLSQKTCPLYKSAH-AVEQRWSIRAAGLRQRHIDQAQSVNLYI------TTDF 807 Query: 710 PMQQLLKDLLTAYKFGVKTLYYQNTRD 736 ++Q+L + A++ G+K+LYY ++ Sbjct: 808 TLKQVLDLYVYAWEVGMKSLYYVRSQS 834 >UniRef50_C8XUI7 NrdA ribonucleoside-diphosphate reductase alpha subunit n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI7_9CAUD Length = 759 Score = 631 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 358/767 (46%), Positives = 512/767 (66%), Gaps = 21/767 (2%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + V KRDGS+ +++K H V+D A +GL VS+S+V S IQF D ++T I + +I+ Sbjct: 2 INVIKRDGSSVPFDIEKPHEVVDRACDGLTGVSMSEVIAASKIQFTDNMRTDRIQDILIQ 61 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYT 124 AAA LIS D P+YQY+AARL + LRK YGQ++PP L D VK ++ YD L+ YT Sbjct: 62 AAASLISVDKPNYQYVAARLKSYDLRKAVYGQYKPPHLLDIFVKNIKQRVYDREFLDLYT 121 Query: 125 EEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGE---IYESAQFLYILVAACLF 181 EEF +++ I+H RD F++AA+ QL KYL+++R + YE+ Q +Y+ +A LF Sbjct: 122 TEEFNELNDVINHKRDKNFTWAAMGQLTEKYLLRDRSKKDSKIFYETPQVMYMGIAMALF 181 Query: 182 SNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATS 241 SN+ +++RL+ VK+FY+ ST K SLPTPIM+GVRTPTRQFSSCVLI+ GD+LDSINAT+ Sbjct: 182 SNWDKDSRLEMVKKFYEYASTGKFSLPTPIMAGVRTPTRQFSSCVLIKTGDTLDSINATA 241 Query: 242 SAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGA 301 IV YVS+RAGIG + G IR +GSPIRGGE HTG IPF K+ A+KSCSQGG+RGGA Sbjct: 242 KTIVDYVSKRAGIGFDVGAIRGIGSPIRGGEMVHTGLIPFIKYLTGALKSCSQGGIRGGA 301 Query: 302 ATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDV 361 AT + P+WH + + ++VLKNNRG E NR R +DYG+QIN++M+ RL+ + + LF P D Sbjct: 302 ATAYIPLWHYQFDDVVVLKNNRGTEENRERRIDYGIQINRVMFERLVAKQPLYLFDPKDN 361 Query: 362 PGLYDAFFADQEEFERLYT---KYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 +Y+A+FAD ++F LY K +R ++++A E+F +++ +R+ TGRIYI VD Sbjct: 362 REMYEAYFADVDKFRTLYENMIKAADAGLVRSKKLQAEEVFQMLLDQRSDTGRIYIAFVD 421 Query: 419 HCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDEL 478 H N +SPF + + SNLCLEIALPT+ NDENG +ALCTL++FNL A + E+ Sbjct: 422 HMNEYSPF--NLDTIYSSNLCLEIALPTREFEQYNDENGRVALCTLASFNLTAFEDPTEM 479 Query: 479 EELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 E++A + V ALD LL+YQDYP A++ R LG+G++N A++LAK+ Y + Sbjct: 480 EDVAFVLVSALDMLLEYQDYPAIQARKAVEDYRPLGVGIVNVAHFLAKNFTGYGSPAGLE 539 Query: 539 LTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN------ 592 + + +YL+KASN LA + GAC T + G + D LD + N Sbjct: 540 MLDAWMAHLHFYLVKASNRLAMKFGACK--RGTIHGMGQVTADLQPLPLDILPNGKKPEG 597 Query: 593 EPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGIL 652 DW+ L++ +KT+G+RN+TL A+ P+E+SSQ+ NATNGIEPP+G VSIK SKDG Sbjct: 598 MAYGLDWDDLKDDLKTYGIRNATLLAVAPTESSSQVLNATNGIEPPKGLVSIKGSKDGTY 657 Query: 653 RQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQ 712 +QVVPD E L Y+L W++ + YL+ ++Q+++DQSIS NT YDP ++P GK+P Sbjct: 658 KQVVPDVETLGPLYDLKWDLDCIE-YLKTAAVIQRWVDQSISTNTWYDPEKYPDGKIPRA 716 Query: 713 QLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGAC 759 ++++D+L+ Y +G KTLYY +D ++D ++ C++ Sbjct: 717 KMMQDILSFYMWGGKTLYYNTNKDA----KEDEELKQAEEVCDTCVV 759 >UniRef50_A5TVY2 Ribonucleoside-diphosphate reductase n=15 Tax=Fusobacterium RepID=A5TVY2_FUSNP Length = 755 Score = 629 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 220/770 (28%), Positives = 363/770 (47%), Gaps = 39/770 (5%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKA 65 V RD E +N++KI L A EGL V++ ++E + + I T I ++I Sbjct: 7 KVINRDNIVEDLNIEKIREKLLRACEGLE-VNMVELESNIDSIYEENITTQKIQASLINT 65 Query: 66 AADLISRDAPDYQYLAARLAIFHLRKKAY--GQFEPPALYDHVVKMVEMGKYDNHLLEDY 123 A + + + D+ Y+A RL + ++ Y F + KMVE+G YD LL Y Sbjct: 66 AVAMTTFEESDWSYVAGRLLMMEAEREVYHSRGFSYGDFSKTIRKMVELGLYDERLLS-Y 124 Query: 124 TEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN 183 TEEE Q+ ID +RDM + YA +YL++ G+ YE Q ++ ++ L N Sbjct: 125 TEEELNQIAQLIDVNRDMVYDYAGANMFVNRYLIK--YDGKTYELPQETFMAISMMLALN 182 Query: 184 YPR-ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSS 242 ETR++ VK FY+A+S K+SL TPI++ +R P SSC + D+++SI Sbjct: 183 EKAGETRVEIVKEFYNALSLRKLSLATPILANLRIPHGNLSSCFITAIDDNIESIFYNID 242 Query: 243 AIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAA 302 +I + G+G+N RIRA GS + G G +P+ + + +Q G R GA Sbjct: 243 SIARISKNGGGVGVNVSRIRAKGSMVNGYYNASGGVVPWIRIINDTAVAVNQQGRRAGAV 302 Query: 303 TLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVP 362 T+ WHL++E+ L L+ G + + + V + L R+ E TL P ++ Sbjct: 303 TVALDTWHLDIETFLELQTENGDQRGKAYDIYPQVVCSNLFMKRVKNNETWTLLDPYEIR 362 Query: 363 GLYDAFFAD--QEEFERLYTKYEKDDSIRKQRV-KAVELFSLMMQERASTGRIYIQNVDH 419 Y + EFE LY K E D +I+ ++V A ELF +M+ + TG YI D Sbjct: 363 KKYGIELCELYGYEFENLYEKIENDPNIKLKKVLSAKELFKSIMKTQLETGMPYIFFKDR 422 Query: 420 CNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDEN-----------GEIALCTLSAFN 468 N + + + + NLC+E KP + +E GEI C L + N Sbjct: 423 ANEVN-HNSHMGMIGNGNLCMESFSNFKPTINFVEEEEGNTSIRRSEMGEIHTCNLISIN 481 Query: 469 LGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHG 528 L + +ELE+ LAVRALD +D P+ + + + RT+G+G + A YLA+ Sbjct: 482 LAEL-TSEELEKHVALAVRALDNTIDLTVTPLKESNKHNLLYRTIGVGAMGLADYLAREY 540 Query: 529 KRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLD 588 Y + N ++ FE I Y +KAS LAK++GA F + + +GI KK Sbjct: 541 MIY--EESINEINELFERIALYSIKASALLAKDRGAYKAFKGSKWDQGIFYG---KKREW 595 Query: 589 TIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 N +W ++T+GLRN L+A+ P+ ++S + +T + P I+ ++ Sbjct: 596 YDTNSKFKDEWNEAFYLVETNGLRNGELTAIAPNTSTSLLMGSTASVTPTFSRFFIEKNQ 655 Query: 649 DGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGK 708 G + + V + Y + Y++++ + ++ Q +S +D + Sbjct: 656 RGAIPRTVKHLKDRAWFYPEFKNVNPI-SYVKIMAKIGSWVTQGVSMEMVFD----LNKD 710 Query: 709 VPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 + + + L+TA++ G K++YY T Q + + CES + Sbjct: 711 IKAKDIYDTLITAWEEGCKSVYYIRT------IQKNTNNISDKEECESCS 754 >UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MCH3_CALMQ Length = 877 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 172/862 (19%), Positives = 313/862 (36%), Gaps = 134/862 (15%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + V KR+G E N K+ L A G N E+ S I+ + +S+I +++ Sbjct: 12 ITVIKRNGLREEFNPVKLLNSLKLA--GAPNPERILEEVTSQIKGKGEVTSSEISDSVQL 69 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPA---------------LYDHVVKM 109 +LIS D + A +F + K+A+G+ + L D + Sbjct: 70 MMLNLISEDF-KWHDAARNYLLFSIYKQAWGKEVVKSINSGSLTLSEAYRRGLRDWFNQG 128 Query: 110 VEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESA 169 + G + + E+ ++ +D RD+ +Y V+ L +YL++ R+ G +E+ Sbjct: 129 LNQGLWSLD-AAKFYEKHLDELMNKLDPSRDLLLTYNGVRTLMSRYLMK-RLDGSFFETP 186 Query: 170 QFLYILVAACLFSNYPRETR--LQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVL 227 Q++++ +A + + + +++V++FYD VS K +P M T + S+C + Sbjct: 187 QYMWMRIAMGVAYSEVKYGNDPIKWVEKFYDLVSQLKFLPNSPTMFNALTKLGELSACFV 246 Query: 228 IECGDSLD------------SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFH 275 I D L I + AG+G G +R G ++ Sbjct: 247 IPVDDCLSKDSNRDNPNCFFGIMDAAKLAALLFQAGAGVGYQFGELRPEGDVVKSTSGVA 306 Query: 276 TGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDY 335 +G + F + F T V QGG R GA WH ++E + K R + ++++ + Sbjct: 307 SGPLSFMRLFDTLVDVIKQGGKRRGAQMGMLFWWHPDIEKFITSKTGRLKD-VQLQNFNI 365 Query: 336 GVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS----IRKQ 391 V I+ T+ L+GED+ L +P + LY + +EF + Y + + Sbjct: 366 SVTIDDYFMTKALRGEDVYLLNPRECTCLYQTW---GQEFIKCYEECVSKVKAGLVKVWR 422 Query: 392 RVKAVELFSLMMQERASTGRIYIQNVDHCNT-----HSPFDPAIAPVRQSNLCLEIALPT 446 RV A EL+S +++ +G + N D N + + +N C E+AL Sbjct: 423 RVNAGELWSKIVESAWDSGDPGLWNRDVANMKIEYVNDVVSEKYRVINGTNPCGEVALYP 482 Query: 447 KPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELAILAVRALDALLDYQDYPIP 501 C L + NL + L +LAVR LD ++D +P Sbjct: 483 ------------FESCNLGSINLTKYINGNSIDWVSLANDIMLAVRFLDDVIDSNQHPHE 530 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 R R +G+G+ +A L Y A L + ++AS ELAKE Sbjct: 531 YLDRANKASRRIGLGINGWADVLVSLDIPYDSPKAIALADVVMGFVARVAVRASVELAKE 590 Query: 562 QGACPWFNETTYAKGILPIDTYKKDLDTIAN----------------------------- 592 +G P + + + G LP + + + + Sbjct: 591 KGPFPLWPSSKWRSGFLPWRVHDERVSKMLEVKGVSSDVEEYLEILKLGYGELGGLPNKA 650 Query: 593 ----EPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 L + L + T G+RN L ++ P + S I+ + IEP ++ Sbjct: 651 EEYLAKLRATDDELIKDASTVGVRNGALISIAPEGSRSLIAGVNSSIEPIFAIAYVRNLS 710 Query: 649 DGILRQVVP---------------------------DYEHLHDAYELLWEMPGNDGYLQL 681 G L + +H + E+ ++ + Sbjct: 711 IGKLIEYNYTALRKLKDSNALDNETTSKVLESGMLPSNHVMHPVLKTANEIHW-RWHVFM 769 Query: 682 VGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGV--KTLYYQNTRDGAE 739 K+ D +S N + + A+ G T+Y ++ + Sbjct: 770 QVTFAKWSDSGVSKTINMP------SNATKEDVNGAYRLAWALGAFGITVYRDKSK-AVQ 822 Query: 740 DAQDDLVPSIQDDGCESGACKI 761 + + ES A K+ Sbjct: 823 VIYTGVEGKGKAQSTESKAIKV 844 >UniRef50_B7XJ88 Ribonucleoside-diphosphate reductase n=2 Tax=Enterocytozoon bieneusi H348 RepID=B7XJ88_ENTBH Length = 778 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 177/793 (22%), Positives = 316/793 (39%), Gaps = 101/793 (12%) Query: 33 LHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKK 92 + +++ + + +++ + + AA +I+ P Y LAA + I HL + Sbjct: 21 IEGLNLPLFFDKVSSGLALDMTPTEMTKYCSEIAATMITI-HPSYNKLAAIILIKHLHEN 79 Query: 93 AYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLE 152 + F +Y K + ++ ++ + ++RD F Y A+ L+ Sbjct: 80 TFNTFSDKMMYIQQEKNIFDDHIMELII-----NNMNVYNSIVKYERDYNFDYFALISLQ 134 Query: 153 GKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIM 212 Y + +V + E Q +Y+ VA L V++ YD +S + TP + Sbjct: 135 KSYQI--QVNNTVIERPQDIYMRVAIELHG-----DDFNNVQKTYDLLSQQYYTHATPTL 187 Query: 213 SGVRTPTRQFSSCVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGG 271 Q +SC L+ D++ I T Y G+G++ +R S + Sbjct: 188 YNSCFKKNQLASCFLLGMKSDTIAGIFDTIKEAAIYSKLSGGVGLHISNLRCDKSQLVTT 247 Query: 272 EAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL-FYPMWHLEVESLLVLKNNRGVEGNRV 330 + G IP K ++K +QGG R A + WH ++ L L+ N G+E R Sbjct: 248 GGYSKGIIPIVKLINDSMKYINQGGARRCATCAFYLEPWHKDILKFLDLRKNTGIEEERA 307 Query: 331 RHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK 390 R + IN L R+ K E +LF P+ GL D + ++F +LY YE ++I + Sbjct: 308 RDSFTALWINDLFMERVEKNEMWSLFDPNIAKGLQDVW---GDQFNKLYAYYE--ETIER 362 Query: 391 QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN 450 + A +L+ ++ + TG Y+ D CN +S + I ++ SNLC EI + Sbjct: 363 TTIPAQKLWKEIICSQIETGTPYMCYKDTCNRYSNQN-NIGTIKSSNLCAEIIQYSDSDI 421 Query: 451 DVNDENGEIALCTLSAFNLGAI-----------NNLDELEELAILAVRALDALLDYQDYP 499 A+C L++ L + EL + + ++ ++D +P Sbjct: 422 --------TAVCNLASICLPKYVKINSTTSNYYFDFQELYTVVKIVTYNMNKMIDKSAFP 473 Query: 500 IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELA 559 +K+G R +GIGV A G + A +L FE + + L+AS ELA Sbjct: 474 TEESKKGNSLFRPIGIGVQGLADVFFLMGYSFESKEARDLNKMIFETLYFGALEASCELA 533 Query: 560 KEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPL-HYDWEALRESIKTHGLRNSTLSA 618 ++ G ++ + Y++GI + + + + ++WE LR +KT+G+RNS A Sbjct: 534 QKHGPYSYYQGSMYSQGIFHFEKFCEGRINVNEILSGMWNWEELRIKMKTYGVRNSLTLA 593 Query: 619 LMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPD-------------------- 658 LMP+ ++SQI + IEP + + + + G + V Sbjct: 594 LMPTASTSQICGNSECIEPIQSNIFTRRTFAGEFQIVNKYLMKDLIKLGLWNNEIKQLII 653 Query: 659 ------------YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPS 706 +H+ D Y+ +WE+ L + Q F+DQS S N Sbjct: 654 EYEGSIQKIPIIPQHVKDLYKTVWELKM-KSVLDMAIDRQAFVDQSQSLNLFVKEP---- 708 Query: 707 GKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVP------------------ 747 L +K +KT +YY T A+ + + Sbjct: 709 ---TYGILSSMHFYGWKNKLKTGMYYLRTCPLAKAIKFTVDKELILKTLSSFKDSENDKK 765 Query: 748 -SIQDDGCESGAC 759 + ++D CE +C Sbjct: 766 LNKENDYCEGCSC 778 >UniRef50_B2V806 Ribonucleoside-diphosphate reductase n=2 Tax=Aquificales RepID=B2V806_SULSY Length = 850 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 169/824 (20%), Positives = 331/824 (40%), Gaps = 108/824 (13%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVS----ISQVELRSHIQFYDGIKTSD 57 ++N +V KRDG+ E+ + K+ + EGL + ++ ++ + + T + Sbjct: 4 HKNRIVVKRDGTQEKFQMKKLVDAIFALLEGLDLPDDYEIVFKITKELDLKIPEVVTTEE 63 Query: 58 IHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDN 117 + ++KA LI + Y +A R + + ++ +F + D++ V Sbjct: 64 LDYLVLKAIEHLIPTGSI-YDTIATRQLLKIINRRIERRFS--SFKDYINYAVNEKLLKP 120 Query: 118 HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 LL + +++ ID+ RD Y + L+ +YL ++R E E Q+ ++ VA Sbjct: 121 ELL----NFDIDLLESKIDYSRDNNLDYFGLSTLKDRYLTKDR-NFETIEKPQWFFMRVA 175 Query: 178 ACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI 237 + + + + YD +S + TP + T T Q+SSC + DSL+SI Sbjct: 176 MGIGNTEEE------ILKIYDKLSNLEYLHSTPTLFNSGTLTNQYSSCYVNVVDDSLESI 229 Query: 238 NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV 297 + G+G + RIRA GS I A +G IPF K F T V + QGG Sbjct: 230 MDKAKETAFLAKYAGGVGTDITRIRATGSKIHSLNAKSSGIIPFIKIFDTIVNAIQQGGR 289 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R + ++ WHL+VE+ L L+ G R ++ + + + R+ +GE I LF Sbjct: 290 RRSSQVMYLQPWHLDVEAFLDLRETTGNPYFRTPSLNTALWMPDEIMRRIKEGEPIYLFD 349 Query: 358 PSDVPGLYDAFFADQ-EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQN 416 P++ L ++ + ++++ K E+ + +++ + + + + + A TG ++ Sbjct: 350 PAECRELVTSYGEEFAKKYQECIEKAERGELELWKKIDSRDFYKKYLFKLAKTGHPWLTF 409 Query: 417 VDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---- 472 D N H+P P + + SNLC EI++P P + A+CTL++ NL Sbjct: 410 KDAHNRHNPC-PKYSVINSSNLCTEISIPNSPQS--------TAVCTLASVNLARHLKKV 460 Query: 473 ------------------------------NNLDELEELAILAVRALDALLDYQDYPIPA 502 + D+L++ V ALD +LD YP Sbjct: 461 ERETSDVKREELSPNEKNTSHLLTYSPTHSIDWDKLKDTLETMVVALDNILDKNFYPSEE 520 Query: 503 AKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQ 562 +++ M R +GIG++ F L G Y A L + + ++ + + S ELAKE+ Sbjct: 521 SRKNTMDLRPIGIGLMGFHEALIYLGIPYDSDEAIELAKEIAKFMRETVYRKSEELAKER 580 Query: 563 GACP-WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMP 621 GA P ++ + + + + T + + RN+ L A+ P Sbjct: 581 GAFPHYYEVSKRESEKVKSEELNPNEKTPTHLLTYSPTHPYNYP----PRRNAVLLAIAP 636 Query: 622 SETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHL------------------- 662 + + S I+ ++ I+ + + + G V + Sbjct: 637 TASISIIAGTSSSIDNYFSNIFSRDTLSGKFIVVNKPLMKMLEEKGIWNEEMLEKIKANQ 696 Query: 663 --------------HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGK 708 ++ +E+ + + Q++IDQ++S + + Sbjct: 697 GSIQYIDELEGVVDKRLFKTAYEVSPYRQ-IDIAAAFQQYIDQAVSKSLYIEEDL----- 750 Query: 709 VPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDD 752 + + A++ G+K+ YY + + + + + + Sbjct: 751 --RDDMENIYMYAWEKGLKSTYYCFIDKTIKGEKYTMNVNKRGE 792 >UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7R7_KORCO Length = 876 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 153/858 (17%), Positives = 291/858 (33%), Gaps = 176/858 (20%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKT------- 55 + V KRDG + +I R ++ A + + + D I + Sbjct: 2 RVTKVVKRDGRVVEFDSFRIRRAIEMAMREVGKFD-EAILDKVVKYVLDVIDSTFSDERP 60 Query: 56 ---SDIHETIIKAA-----------------------ADLISRDAPDY--------QYLA 81 +I + + A + ++ DY A Sbjct: 61 PHVEEIQDIVELALMKYDLFEVAKAYIVYRKEREKIRKEKMAILGKDYVDDVDKRLSLNA 120 Query: 82 ARLAI-FHLRKKAYGQF--EPPALYDHVVKMV--EMGKYDNHLLEDYTEEEFKQMDTFID 136 RL +L+K G+F +P L+ + +V YD + + E+E + F Sbjct: 121 VRLLASRYLQKGPDGRFLEDPKGLFIRIASLVVIPDILYDPLIFDKEGEQEVHPTEYFNP 180 Query: 137 HDRDMTFSYAA--------------VKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS 182 + LE + + + + V+ F Sbjct: 181 EEWAGKVGLGGGDPENHLAPPFVWNAHHLERMKALYDELNS-------QGKMRVSWSQFF 233 Query: 183 NYPRETRLQY----VKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSIN 238 + R+ R + +Y + K +P + T Q S+C ++ DSL+SI Sbjct: 234 DMLRDGRFDHHYKDFLEYYRLMVDLKFIPNSPTLFNAGTMLGQLSACFVLPIEDSLESIM 293 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVR 298 +++ G+GIN ++R G +R +G + F + QGG R Sbjct: 294 RSATEAAMIFKSGGGVGINYSKLRPQGDIVRSTGGQASGPVSFMRIIDVITDVVKQGGRR 353 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 GA +WH ++ + K G + + + V I + + +G+D L +P Sbjct: 354 RGANMGILEIWHPDIMKFIEAKAKPGN----LENFNLSVMITEDFWKYYEEGKDYPLINP 409 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 + + E F + + TG + D Sbjct: 410 RN--------------------------GEVWGSIDPREAFRKIAEMAWRTGDPGVLFAD 443 Query: 419 HCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------ 472 + N + + ++ +N C E L C L + NL A Sbjct: 444 NINRRNILREHLGEIKSTNPCGEEPLYP------------YESCNLGSMNLYAYIRRENG 491 Query: 473 ---NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGK 529 + DE A+R LD ++D +PIP ++ R +G+G++ A L Sbjct: 492 LVTFDWDEYSRDIRKALRFLDNIIDVNKFPIPEIEKTTKRTRKVGLGLMGLADTLFALRI 551 Query: 530 RYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDT 589 Y+ N + E + Y+ + S E AKE+G+ P F E+ Y +G +P++ + Sbjct: 552 PYNSEEGFNFMRRAAEYLTYFAMLESVERAKERGSFPLFPESGYVRGEMPVEGF------ 605 Query: 590 IANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD 649 E + DW+ LRE I +G+RN+ ++ + P+ + S I+ ++GIEP V K Sbjct: 606 YHPEIWNLDWDYLREQIMRNGIRNAEVTTIAPTGSISMIAEVSSGIEPQFALVFEKRVTV 665 Query: 650 GILRQVVPDY--------------------------------------EHLHDAYELLWE 671 G V ++ E + + + ++ Sbjct: 666 GSFFYVDAEFERQLKENGLYSEKILRDIAENGGSLYGIEAPEGKEDVIERMKRIFLVAYD 725 Query: 672 MPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TL 729 +P D +++ + ++I ++S N V + + K L A++ G+K T+ Sbjct: 726 IPWWD-HIRAEAEISRWICAAVSKTINMP------NWVSVSDIEKAYLFAHRLGLKGITV 778 Query: 730 YYQNTRDGAEDAQDDLVP 747 Y ++ Sbjct: 779 YRDGSKSAQVLITPTQRR 796 >UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Sulfolobaceae RepID=C3N5F1_SULIA Length = 838 Score = 604 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 162/834 (19%), Positives = 293/834 (35%), Gaps = 159/834 (19%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDG-IKTSDIHET 61 + + V KRDG + L+KI L + + + D I T I + Sbjct: 11 RKIKVIKRDGRVDEFKLEKILSKLSS----VPDEVTDGIVNDVQANVKDNAIDTRAIADI 66 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE 121 + + + S P LA R + + +G+ GK+ + Sbjct: 67 VERNLIEN-SLKYPFLMELAKRYVLARIYNHVFGK----------------GKWKDF--- 106 Query: 122 DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF 181 +++D+ SY A+K LE +YL+++ T E+ Q L+ VA L Sbjct: 107 ---------------NEKDLLLSYNALKVLEARYLLKDPNTLRYIETPQMLFRRVARFLA 151 Query: 182 SNYPRETRLQ-----YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSL-- 234 S + + + ++FY+ +S+ K +P + T S+C +I D++ Sbjct: 152 SVERKYGKSEAEVKQLEEKFYEMISSLKFVPNSPTLMNSETRLGILSACFVIPVKDAMTT 211 Query: 235 ---DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS 291 D I A Q G G + +R G + +G + F K F + Sbjct: 212 PEGDGIYDALRATALVHQQGGGTGFDFSELRPKGDVVASTAGVASGPVSFMKVFDASTDV 271 Query: 292 CSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 QGG R GA WH ++E + K + + ++++ + V ++KGE Sbjct: 272 IKQGGKRRGANMGVMHAWHADIEDFIRAKTGQLKD-VQLQNFNISVGAYDYFMEAVVKGE 330 Query: 352 DITLFSPSDVP----------GLYDAFFADQEEFERLYTKYEKDDSI------------- 388 + L +P + ++ E + ++ E+ + Sbjct: 331 SVPLINPRKTKIAGRDHEYYITKARGYMNEEWIQEVIISELEEKGGVVSLDESKVITVDE 390 Query: 389 ----------RKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNL 438 + V A LF +++ +G + +D N P + + +N Sbjct: 391 ALIIASKEGAVVRYVNAKSLFDEIVKGAWDSGDPGLLFIDTINRRHPV-WYLGKINATNP 449 Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------NNLDELEELAILAVRAL 489 C E L C L + NL + D L E+ VR L Sbjct: 450 CGEEPLLPWE------------SCNLGSINLEKFIIERNGKVEIDWDGLAEIISYGVRFL 497 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 D ++D YP+ + R +G+GV+ A K G Y A L+++ + I Y Sbjct: 498 DNVIDANRYPLKQIEDATKRTRKVGLGVMGLARMFIKLGIAYDSVDAIYLSYQLAKFIFY 557 Query: 550 YLLKASNELAKEQGACPWFNETTYAK---------GILPI----DTYKKDLDTIANEPLH 596 + KAS E+AKE+G P ++ Y +L I D + + Sbjct: 558 HAYKASIEVAKEKGPFPTYDSKLYRDIWESALDFNSLLQIAEVADKPSDYVKKLTGVVDK 617 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQV- 655 D++ L++ +GLRNST+ ++ P+ T S I+ ++ IEP ++ G ++ Sbjct: 618 LDFDLLKDERLKYGLRNSTIVSIAPTGTISIIAGTSSSIEPLFALAFVRNVAVGKFIEID 677 Query: 656 ------------------------------VPDYEHLHDAYELLWEMPGNDGYLQLVGIM 685 V L + E+P ++ Sbjct: 678 PLFLEYLRKYELDDPEVIQKIAESGIIGDNVFMPRSLRKLFRTAHEVPPI-YHVLHQAAW 736 Query: 686 QKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDG 737 Q++ D S N P + + K L A+K G+K T+Y ++ Sbjct: 737 QQWNDSGTSKTINLRSEEPP------ETVEKVYLLAWKLGIKGITVYRDKSKQQ 784 >UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hydrogenothermaceae RepID=C0QPQ0_PERMH Length = 847 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 165/849 (19%), Positives = 295/849 (34%), Gaps = 171/849 (20%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVSIS-------QVELRSHIQFYDGI--KTS 56 + KRDG N +KI + A + + S +V G Sbjct: 4 KIRKRDGRIVPFNPEKITNAIWKAMQAVGEKDFSTAEKISKEVVRELERTLKPGEIPDVE 63 Query: 57 DIHET----IIKAAADLISRDAPDYQY--------------------------------L 80 I + +I+A +++ Y+ L Sbjct: 64 QIQDIVERKLIEAGLARVAKAYILYRQKRAEIRKEKQQILNKKEIDEVDKRFDINALRVL 123 Query: 81 AARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQ--MDTFIDHD 138 AAR K + V + YD + Y+++E K+ ++ F D + Sbjct: 124 AARYLNKDRAGKIIESPKQLFQRVAVNTALPSLLYDERV---YSKKELKKQPVEDF-DPE 179 Query: 139 R--------DMTFSYAAVKQLEGKYLVQNRVTGEIYES--AQFLYILVAACLFSNYPRET 188 R D T + ++ L+ Y +R+ E L ++ F +Y RE Sbjct: 180 RYEGKLKIGDYTLNRYHLEGLKRVY---DRLNNERRMKIPFSKLLKMIEKGDFESYGRE- 235 Query: 189 RLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYV 248 + ++Y + K TP++ P +C +++ DS++SI T Sbjct: 236 ----IDQYYSIMVEKKFMPNTPVLVNFGNPLGMGMACFVLDMEDSIESIMETLKRAALIF 291 Query: 249 SQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPM 308 G G N ++R G I +G I F + QGGVR GA Sbjct: 292 KAGGGCGYNFSKLRPKGDFISTTHGKSSGPIAFMTLYDKMTDVIKQGGVRRGANMGILNS 351 Query: 309 WHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF 368 H ++E +V K ++ + + V + + + + + L +P D Sbjct: 352 DHPDIEEFIVAKKGN----VQLTNFNISVFLKEDFWDYYRENKPYPLINPRD-------- 399 Query: 369 FADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 + V LF ++ E + + D+ N ++PF Sbjct: 400 ------------------GKVWKYVNPRNLFDTIVYEGWESAEPGLLFDDNINRYNPFLE 441 Query: 429 AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-------------NNL 475 ++ +N C E+ L C L + NL A + Sbjct: 442 TFGRIQATNPCGEVLLYP------------NESCDLGSINLWAFIKEYYDGNGRKVEVDW 489 Query: 476 DELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGS 535 D LE+ +A R LD +LD YP ++ + R +G+G++ A +L + Y+ Sbjct: 490 DGLEKTVRIATRFLDNVLDINKYPFKEIEKETLKNRKIGLGIMGLADFLFELEIPYNSED 549 Query: 536 ANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPL 595 + E + YY + S +LAKE+G P +N++ Y KG LPI +++ E Sbjct: 550 GRRWMERVMEFVNYYSKEESIQLAKERGKFPSYNKSFYRKGKLPIRGFEEK------ESW 603 Query: 596 HYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQV 655 + DW+ L + IK HGLRN+ + + P+ + S I+ T+GIEP V K G V Sbjct: 604 NLDWDKLIDKIKKHGLRNAFTTVIAPTGSISMIAGTTSGIEPIFALVYEKKVTVGTFYYV 663 Query: 656 V--------------------------------PDYEHLHDAYELLWEMPGNDGYLQLVG 683 E + ++ D +++ + Sbjct: 664 DPVFEKTMEREGIFDDTLIKDVSKNEGSIQDIKYIPEKWKKVFVTAMDISAED-HVKALA 722 Query: 684 IMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDA 741 +QK+ D S+S N+ ++ + + L A+ G K T+Y + G A Sbjct: 723 SVQKWTDSSVSKTINFPE------DATVEDMKRAYLLAHYLGCKGLTVYRYKSIKGVYVA 776 Query: 742 QDDLVPSIQ 750 ++ + Sbjct: 777 GEEKKEEAK 785 >UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU7_9EURY Length = 762 Score = 599 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 150/803 (18%), Positives = 284/803 (35%), Gaps = 163/803 (20%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYD-GIKTSDIHETII 63 +V KRD S + KI + A + YD +K +++ + Sbjct: 3 TVVIKRDDSKVDFDRTKIENAVFKA----------------YKSVYDSNVKEAELRKRAE 46 Query: 64 KAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDY 123 + D++ I KK E + + V+ + + +++L + Sbjct: 47 NSTTDIVKE-------------IEATGKKEIRVEEIQDIVEKVLMLKDQTVAKSYILYRH 93 Query: 124 TEEEFKQMDTFID-HDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS 182 + E + + D + + L +YL++ G+I ES + L+ V+ + + Sbjct: 94 KKAEIRAFRASLGIPDDGLKLPINTLIVLASRYLLKGPD-GKIAESPKQLFTRVSHYIAA 152 Query: 183 NYPRETRLQ-----YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI 237 + + FYDA++ FK +P + T Q S+C ++ GDS+ I Sbjct: 153 AEKKFGKSDDETNALEMEFYDAITNFKFMPNSPTLMNAGTKLGQLSACFVLPVGDSIVEI 212 Query: 238 NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV 297 G G + R+R ++ +G + F K F A + QGG Sbjct: 213 FDAVKYAAIIHQSGGGTGFSFSRLRPTNDMVKSTGGVASGPVSFMKVFDIATEQVKQGGK 272 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R GA + H + +V K N G +R+ + V I L D +L + Sbjct: 273 RRGANMGILRVDHPSILDFIVAKENEGT----LRNFNISVAITDEFMKALEANRDYSLVN 328 Query: 358 PSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417 P + ++ A +++L++ TG + + Sbjct: 329 PRN--------------------------GKVVGKLNARAVWNLIITMAWKTGDPGLVFL 362 Query: 418 DHCN-THSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---- 472 D N ++S P + PV +N C E L C L + N+ + Sbjct: 363 DRINSSYSNPVPTLGPVESTNPCGEQPLYPYD------------SCNLGSINMAKMLKKN 410 Query: 473 -----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKH 527 + DEL+ + + VR LD +++ YP+ + R +G+G++ +A L K Sbjct: 411 DGQYDIDWDELKRITRMGVRFLDNVIESNTYPLKEIEDVTKKIRRIGLGIMGWADMLIKL 470 Query: 528 GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDL 587 G RY A L K I K S ELA+E+G P F ++ + K Sbjct: 471 GIRYDSNEALMLAEKVMSFITENARKMSEELAEERGPFPAFKDSIWYKLGY--------- 521 Query: 588 DTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKA 646 LRNST++ + P+ T S I+ A+ GIEP V ++ Sbjct: 522 ---------------------KPLRNSTVTTIAPTGTISIIAGGASQGIEPIFSVVYMRN 560 Query: 647 SKDGI----------------------------------LRQVVPDYEHLHDAYELLWEM 672 + + ++ V + + + +++ Sbjct: 561 VHESLGSNLIEVNNEFEAMAIENNFYSDELMKKLAGRVSIQDVEEIPQEIRRLFVTAYDI 620 Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLY 730 + ++++ QK++D ++S N+ Q + K + AYK G K T+Y Sbjct: 621 A-PEWHVRMQAAFQKYVDNAVSKTINFP------SWATPQDIEKAYVLAYKLGCKGITVY 673 Query: 731 YQNTRDGAEDAQDDLVPSIQDDG 753 +++ + ++ + Sbjct: 674 RDSSKSVQVLQSVEQQKTLTEPS 696 >UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=Thermococcus RepID=C5A3W2_THEGJ Length = 911 Score = 595 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 149/826 (18%), Positives = 281/826 (34%), Gaps = 152/826 (18%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQV------ELRSHIQFYDGIK--TSD 57 V KRDG + ++I + A + + +R + YDG + Sbjct: 5 KVMKRDGRIVPFDRERIRWAIKRAMLEVGVHDDKLLNRVVRRVVRRINELYDGQVPHIEN 64 Query: 58 IHET----IIKAAADLISRDAPDYQY--------------------------------LA 81 I + +++A +++ Y+ LA Sbjct: 65 IQDIVELELMRAGLFEVAKAYILYRKKKAEIREEKKKILNKDRLDEIDKRFSLNALRVLA 124 Query: 82 ARLAIFHLRKKAYGQFEPPALYDHVVKM--VEMGKYDNHLLEDYT--EEEFKQMDTFIDH 137 +R I + + + P L++ V + + YD + + E++ ++ +++H Sbjct: 125 SRYLIRNEKGEIIE--SPRELFERVATLAVIPDLLYDERVYDKNGKHEQDLSRVKYYLEH 182 Query: 138 DRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA----ACLFSNYPRETRLQYV 193 + Y+ + KY R+ E A+ + V+ + N + V Sbjct: 183 FEEFDGRYSIGRFKLNKYHF-ERLVNLYRELAEKGRMKVSIDEFLGMLENGAFDDYESEV 241 Query: 194 KRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAG 253 + ++ ++ TP + P S+C ++ D ++SI + + G Sbjct: 242 EEYFRLMTGQVFMPNTPALINSGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKSGGG 301 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 G+N ++R G + +G + F QGGVR GA +WH ++ Sbjct: 302 TGLNFSKLRPEGDFVGSTAGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDI 361 Query: 314 ESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQE 373 E + K + N + + + V I + + L G+ L +P + Sbjct: 362 EKFIHAKEKN-IGTNVLSNFNISVGIWEDFWEALRDGKRYPLVNPRTGEKV--------- 411 Query: 374 EFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP-AIAP 432 + + LF + S + D N + +P P Sbjct: 412 -----------------KEIDPKSLFEELAFMAWSKADPGVIFFDVINRRNVLEPAKGGP 454 Query: 433 VRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELA 482 +R +N C E L E C L++ NL + DE + Sbjct: 455 IRATNPCGEEPLY------------EYESCNLASINLAKFVKYDDEGKPYFDWDEYAYVI 502 Query: 483 ILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHK 542 + LD +D +P+P R +G+G++ A L K G Y+ K Sbjct: 503 QKVAKYLDNAIDVNRFPLPEIDYNTKLTRRIGVGMMGLADALFKLGIPYNSEEGFAFMRK 562 Query: 543 TFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEAL 602 E + +Y K S E AK++G P + ++ Y G LP++ + E + W+ L Sbjct: 563 ATEYLTFYAYKYSVEAAKKRGTFPLYEKSRYKDGELPVEGF------YHREIWNLPWDEL 616 Query: 603 RESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVP----- 657 E IK HG+RN ++ P+ + S I++ ++GIEP V K+ G V P Sbjct: 617 VEEIKKHGVRNGMVTTCPPTGSVSMIADTSSGIEPIFALVYKKSVTVGEFYYVDPVFEAE 676 Query: 658 ---------------------------DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFID 690 E + + ++ D ++ +Q ++ Sbjct: 677 LKKRGLWSDEILKKISDNYGSVQGLEEIPEDMQRVFVTSMDVHWLD-HILAQANIQLWLT 735 Query: 691 QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNT 734 S S N ++ + L AYK G K T+Y + Sbjct: 736 DSASKTINMP------NDATVEDVKAAYLLAYKLGCKGITVYRDGS 775 >UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YVI2_THEON Length = 910 Score = 594 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 149/828 (17%), Positives = 280/828 (33%), Gaps = 156/828 (18%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQV------ELRSHIQFYDGIK--TSD 57 V KRDG + ++I + A + + ++ + YDG + Sbjct: 5 KVMKRDGRIVPFDKERIKWAIQRAMLEVGVRDEKLLNRVVRRVVKRVNELYDGQVPHIEN 64 Query: 58 IHET----IIKAAADLISRDAPDYQY--------------------------------LA 81 I + +++ +++ Y+ LA Sbjct: 65 IQDIVELELMRVGLFDVAKAYILYRKKKAEIREEKKKILNKDKLDEIDKRFSINALRVLA 124 Query: 82 ARLAIFHLRKKAYGQFEPPALYDHVVKMV--EMGKYDNHLLEDYT--EEEFKQMDTFID- 136 +R I + + + P L++ V +V YD + + E++ ++ +++ Sbjct: 125 SRYLIRNEKGEIIE--SPRELFERVATLVVIPDLLYDERVFDREGNHEQDLSNVEKYMEK 182 Query: 137 -HDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA----ACLFSNYPRETRLQ 191 + D S K KY R+ E AQ + V+ + N + Sbjct: 183 LDEYDRKLSIGRFKL--NKYHF-ERLLNLYRELAQKGQMKVSIDEVIGMLENGAFDKYED 239 Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQR 251 ++ ++ +++ TP + P S+C ++ D ++SI + + Sbjct: 240 EIEEYFRLMTSQTFMPNTPALINSGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKMG 299 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 G G+N ++R G + +G + F QGGVR GA +WH Sbjct: 300 GGTGLNFSKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHP 359 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFAD 371 ++E + K + N + + + V I + L +G+ L +P + Sbjct: 360 DIEKFIHAKEKN-IGTNVLANFNISVGIWSDFWEALREGKRYPLINPRTGEKV------- 411 Query: 372 QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIA 431 + + LF + + + D N + +PA Sbjct: 412 -------------------KEIDPKSLFEELAFMAWAKADPGVIFFDVINRRNVLEPAKG 452 Query: 432 -PVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEE 480 +R +N C E L E C L++ NL + DE Sbjct: 453 EKIRATNPCGEEPLY------------EYESCNLASINLAKFVKYDEEGKPYFDWDEYAY 500 Query: 481 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 + + LD +D +P+P R +G+G++ A L K G Y+ + Sbjct: 501 VIQKVAKYLDNAIDVNKFPLPEIDYNTKLTRRIGVGMMGLADALFKLGIAYNSKEGYDFM 560 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 K E + +Y K S E AK++G P + +T Y G LP++ Y E W+ Sbjct: 561 RKATEYLTFYAYKYSVEAAKKRGPFPLYEKTRYKDGELPVEGY------YHREVWTLPWD 614 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVP--- 657 L E IK +G+RN ++ P+ + S I++ ++GIEP V K+ G V P Sbjct: 615 ELVEEIKKYGVRNGMVTTCPPTGSVSMIADTSSGIEPIFALVYKKSVTVGEFYYVDPVFE 674 Query: 658 -----------------------------DYEHLHDAYELLWEMPGNDGYLQLVGIMQKF 688 E + + ++ D ++ +Q + Sbjct: 675 AELKKRGLWSDELLRKISDNYGSVQGLEEIPEDMQRVFVTSMDIHWLD-HILAQANIQLW 733 Query: 689 IDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNT 734 + S S N ++ + L AYK G K T+Y + Sbjct: 734 LTDSASKTINMP------NDATVEDVKAAYLLAYKLGCKGITVYRDGS 775 >UniRef50_A2PYM5 Ribonucleoside-diphosphate reductase n=4 Tax=Myoviridae RepID=A2PYM5_9CAUD Length = 742 Score = 593 bits (1529), Expect = e-168, Method: Composition-based stats. Identities = 201/772 (26%), Positives = 340/772 (44%), Gaps = 48/772 (6%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETI 62 + V DGS + ++ V++WA EGL V ++ R +F I T +I + Sbjct: 1 MQINVIHTDGSRTPYDANRAIEVINWACEGLE-VDPDKLSRRLSRRFNADITTEEIQNGL 59 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKK--AYGQFEPPALYDHVVKMVEMGKYD---- 116 I+ AA+L PD+ ++ RL ++ R+K A + + G Y+ Sbjct: 60 IRTAAELADLQYPDWLKVSGRLRMWDWRRKVKARRGYLYGNYPVAFEYLRSEGLYEGDLI 119 Query: 117 NHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV 176 L+ Y+ ++ + T+ID +RDM F + L +YL++ E Q +++ Sbjct: 120 KKFLDTYSADDIAEAGTWIDPERDMRFDISGADLLTARYLLEG-------ELLQEMWLTQ 172 Query: 177 AACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDS 236 A L P R+ + + YD +S KISL TP+MS +R SSC +I+ DS +S Sbjct: 173 ALLLSMLEPAHERMTFAHKAYDLLSLGKISLATPLMSNLRQADGSLSSCHIIDIDDSRES 232 Query: 237 INATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG 296 I S + + G+G+ ++RA GS IR + G P+ K + + +Q G Sbjct: 233 IFDNISQLAAMSANGGGVGVRISKVRARGSRIRKKKGASGGVCPWIKIINATIVATNQRG 292 Query: 297 VRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLF 356 VR GA T+ +WH ++ + L+ + G E + R + I+ R++ +D L Sbjct: 293 VRAGACTVGIDVWHADLLEYMDLRGDAGSEHTKARDILLQFIISDEFMRRVILDKDWYLV 352 Query: 357 SPSDVPGLYDAFFAD--QEEFERLYTKYEKD------DSIRKQRVKAVELFSLMMQERAS 408 P+++ ++ AD +EF Y E ++V A ++ M+ Sbjct: 353 CPTEIKNVFGYQLADMYGDEFTNAYHVIEAYINSSAPPLDVVKKVSAKAIWKKMLMLLLE 412 Query: 409 TGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLE-IALPTKPLNDVNDENGEIALCTLSAF 467 TG Y+ D N +P + + NLC+E +L + C L + Sbjct: 413 TGTPYVAFKDRINALNP-NKHEGIIGGVNLCVESYSLFNSSYSHC---------CMLLSL 462 Query: 468 NLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKH 527 L I + DE+ +++ AVR LDA D P P A+ RT+G+GV+ A +LA Sbjct: 463 VLPRIAD-DEMADVSRTAVRLLDAACDLTTSPTPEARAHVNRYRTIGVGVMGLADWLAIR 521 Query: 528 GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDL 587 RY D NL K FE I +Y +AS ELA+E+GA P F + ++KG++ K+ + Sbjct: 522 HLRYQD---LNLIEKLFEDICFYTTQASVELAEERGAYPAFPGSEWSKGLILGGRDKEWV 578 Query: 588 DTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS 647 + +P W AL E I G+RNS + A P+ ++S + AT P ++I + Sbjct: 579 RDNSTDPER--WYALMERIIVSGIRNSHILATAPNSSTSLVQGATASFLPVFSRLTIDKN 636 Query: 648 KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANT--NYDPSRFP 705 GI V + Y+ + +QK++D +S N++ + Sbjct: 637 GAGINTIVPLYIKEAFHFYQES-RYTHPSVVVSAAATIQKWVDTGLSTELLFNFNEHAYG 695 Query: 706 SGK-VPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCES 756 + L + A++ G+KT+YY + QD + + C S Sbjct: 696 FDYVATAKDLNDVYMQAWREGLKTVYYVRSM-----WQDTVTEKSECHSCAS 742 >UniRef50_UPI000194E523 PREDICTED: ribonucleoside-diphosphate reductase M1 chain n=1 Tax=Taeniopygia guttata RepID=UPI000194E523 Length = 847 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 189/829 (22%), Positives = 313/829 (37%), Gaps = 144/829 (17%) Query: 7 VTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAA 66 V+ DG ER+ DKI + GL+ + + + S + G + ++ Sbjct: 41 VSPGDGRQERVMFDKITSRIQKLCYGLNADFVDPLCVSS----FPGAQFLLWDLDLLVPE 96 Query: 67 ADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE---DY 123 A S + P + LY ++ GK+ + + D Sbjct: 97 ASQASSNPPKTCDV------------------MEDLYTYIN--PHNGKHSPMISKETLDI 136 Query: 124 TEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN 183 ++++ I +DRD +++Y K LE YL++ + ++ E Q + + V+ + Sbjct: 137 VLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLK--INSKVAERPQHMLMRVSVGIH-- 192 Query: 184 YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSINATSS 242 + + Y+ +S + +P + T Q SSC L+ DS++ I T Sbjct: 193 ---KADIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLK 249 Query: 243 AIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGA 301 GIG+ IRA GS I G G +P + + + QGG R GA Sbjct: 250 QCALISKSAGGIGLAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGA 309 Query: 302 ATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDV 361 ++ WHL++ L LK N G E R R + + + I L R+ +D +L P++ Sbjct: 310 FAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNEC 369 Query: 362 PGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCN 421 PGL D + EEFE+LY YE+ +R + VKA +L+ +++ + TG Y+ D CN Sbjct: 370 PGLDDVW---GEEFEKLYESYERQGRVR-RVVKAQQLWYAIIESQTETGTPYMLYKDSCN 425 Query: 422 THSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN------NL 475 S + ++ SNLC EI T E+A+C L++ L + Sbjct: 426 RKSNQQ-NLGTIKCSNLCTEIVEYTS--------REEVAVCNLASIALNMYVTPEHSYDF 476 Query: 476 DELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTL---------------------- 513 +L E+ + VR L+ ++D YP+P A R Sbjct: 477 KKLAEVTKVIVRNLNKIIDINYYPVPEDLNRAQFVRGAPHAELSSEETWLPQTPRSPEAL 536 Query: 514 ----GIGVINFAYYL--AKHGKRYSDGSANNLTHKTFEAIQ-----YYLLKASNE----- 557 G G+ + G+ A L + E+ Y L K S Sbjct: 537 PGFWGSGLTGLRVRCSYERQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQ 596 Query: 558 --LAKEQ--GACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 L + C E T + IL D + + +DW+AL+E I +G+RN Sbjct: 597 QNLGTIKCSNLCTEIVEYTSREEILQYDMWNVTPSDL------WDWKALKEKIAKYGVRN 650 Query: 614 STLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVP---------------- 657 S L + MP+ +++QI IEP + + G + V P Sbjct: 651 SLLISPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQVVNPHLLKDLTERGLWNEEM 710 Query: 658 ----------------DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDP 701 + L Y+ +WE+ L++ FIDQS S N + Sbjct: 711 KNQIIAHNGSIQNIPEIPDDLKQLYKTVWEIS-QKTILKMAADRGAFIDQSQSLNIHIAE 769 Query: 702 SRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSI 749 + +L +K G+KT +YY T+ A Q L Sbjct: 770 PNY-------GKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEK 811 >UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Methanomicrobia RepID=A0B8R8_METTP Length = 688 Score = 587 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 138/801 (17%), Positives = 267/801 (33%), Gaps = 178/801 (22%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVS-------ISQVELRSHIQFYDGIKTSD- 57 + KRDG + +I R + A L V +V +F D I + + Sbjct: 15 RIRKRDGRIVDFDPSRISRAISKAFNALGIVDEKTPVELAGRVVDVVDERFRDEIPSVED 74 Query: 58 IHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDN 117 + + + + D Y +A Sbjct: 75 VQDIVEEVLID------AGYAQVAK----------------------------------A 94 Query: 118 HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 ++L E ++ ++ D+ S A++ L+ +YL ++ + E+ ++ VA Sbjct: 95 YILYRQRRSEIREAKHYLGVADDLKLSVNAIEVLKKRYLKRDEFGN-VVETPGEMFERVA 153 Query: 178 ACLFSNYPRE--TRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLD 235 + + + R K+F + + +P + P Q S+C ++ DS+ Sbjct: 154 SAVSAVERRYEGDADDARKKFLSMMRSLSFLPNSPTLMNAGLPLGQLSACFVVPVEDSIA 213 Query: 236 SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQG 295 I + G G + R+R G +R +G + F + F A QG Sbjct: 214 GIFDALKYMALIHQSGGGTGFSFSRLRPKGDVVRSTGGIASGPVSFMRIFDAATDVIKQG 273 Query: 296 GVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITL 355 G R GA + H ++ + K+ G++ + + V I + + + + L Sbjct: 274 GRRRGANMGILRVDHPDITEFIACKDRGGMD-----NFNISVAITEEFMRQCERDGSVEL 328 Query: 356 FSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQ 415 +P + A +L +M G + Sbjct: 329 INPRT--------------------------GEATGEMSARDLMVMMATYAWRRGDPGVV 362 Query: 416 NVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN- 474 +D N P + +N C E L C L + NL + Sbjct: 363 FIDRINALHPVP---GIIEATNPCGEQPLLP------------FESCNLGSVNLSRMVER 407 Query: 475 ----LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530 D LEE LAVR LD ++D +P+ + + R +G+GV+ FA L + G Sbjct: 408 GEISWDRLEETVRLAVRFLDDVIDANRFPLKQIEDATLRTRKIGLGVMGFAEMLIQLGVS 467 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTI 590 Y+ A + + I + S L +E+G+ P F E++ K Sbjct: 468 YASQDALRIAEELMAFITKTAREESCALGRERGSFPLFEESSLKK--------------- 512 Query: 591 ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS--- 647 W+A +RN+T++ + P+ T S I+ ++GIEP ++ Sbjct: 513 --------WDA---------MRNATVTTIAPTGTISIIAGTSSGIEPLFAVSFVRHVLEG 555 Query: 648 -----------------------------KDGILRQVVPDYEHLHDAYELLWEMPGNDGY 678 + G ++++ + + + + ++ + + Sbjct: 556 ARLIESSPLFERMASERGIMTPALRAEVARRGSIQEIPGIPDDIKELFLTALDIS-PEQH 614 Query: 679 LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 +++ QK D ++S N K + ++K AY+ G K T+Y +R+ Sbjct: 615 VRIQAAFQKHTDNAVSKTVNLPE------KASVSDVIKVYRLAYELGCKGITVYRYGSRE 668 Query: 737 GAEDAQDDLVPSIQDDGCESG 757 P +GC Sbjct: 669 QVL---YLGEPDALANGCRFC 686 >UniRef50_A9WCH6 Ribonucleoside-diphosphate reductase n=3 Tax=Chloroflexus RepID=A9WCH6_CHLAA Length = 822 Score = 584 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 122/663 (18%), Positives = 241/663 (36%), Gaps = 89/663 (13%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPR-----ETRLQYVKRF 196 + A L+ +YL++N G++ E+ + ++ VA + + R E + +RF Sbjct: 10 NLTDIARTVLKKRYLLKNE-HGDVIETPETMFWRVAETIAAVDARYGASAEQVEERAERF 68 Query: 197 YDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGI 256 Y ++ +P + P Q S+C ++ D+L SI T G G Sbjct: 69 YHLMTQGYFEPNSPTLMNAGRPLGQLSACFVLPIDDNLTSIYETLKHQALIHQSGGGTGF 128 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 + R+R +R +G + F + + ++ QGG R GA H ++ Sbjct: 129 SFSRLRPRNDVVRSTMGVASGPVSFMDVYNHSTEAIKQGGTRRGANMGILRCDHPDILEF 188 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 + K + ++ + + V I + + E+ L +P GL D + Sbjct: 189 ITCKL----DTTKITNFNISVAITDAFMRAVERDEEYDLINPRT--GLGQIASRDGLKHP 242 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 + R++A +F L++Q +TG + +D N ++P P + + Sbjct: 243 LTGEVLVPAG--QPMRLRARMVFDLIVQCAHATGEPGLFFIDRANEYNPV-PHLGEYEAT 299 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN------NLDELEELAILAVRALD 490 N C E L +C L + NLG + + L ++ + R LD Sbjct: 300 NPCGEQPLLAYD------------VCNLGSINLGKFVTDAGTIDWESLRDVVHESTRFLD 347 Query: 491 ALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYY 550 ++D YP+ + + R +G+GV+ +A L + G Y+ A +L + I Sbjct: 348 NVIDANHYPLEQITQLSQRIRRIGLGVMGWADMLVRLGIPYNSAQAIDLARQVMRFIDEE 407 Query: 551 LLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHG 610 AS +LA+E+G P + + + P T + D P Sbjct: 408 SKVASEQLARERGPFPEWEYSIWG----PDATCARRPDGSRIRPQRL------------- 450 Query: 611 LRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPD------------ 658 LRN ++ + P+ T S I+ ++GIEP + D + + D Sbjct: 451 LRNCNVTTVAPTGTISIIAGCSSGIEPLFAIAFWRYQADTRMLDINQDFVAQAKREGWYS 510 Query: 659 ------------------YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYD 700 + + ++ + ++++ Q++ D +IS N+ Sbjct: 511 DELMERIADTGHIHHPEVPASVQRVWVTAHDIA-PEWHVRMQAAFQEYTDSAISKTINFP 569 Query: 701 PSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 + Q+ + A++ G K T+Y +R + S + Sbjct: 570 H------EATPDQVREAYELAFRLGCKGITVYRDGSRANQVLSTGSTGKSAEPAPASDQP 623 Query: 759 CKI 761 ++ Sbjct: 624 VEL 626 >UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Brachyspira RepID=C0QY27_BRAHW Length = 773 Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 229/793 (28%), Positives = 388/793 (48%), Gaps = 62/793 (7%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHET 61 ++ ++ KRDG E N +K+ +V+DWA EG +Q+ +I+ D +K +++ Sbjct: 7 DKKHIIIKRDGREEPFNEEKLRKVIDWATEGKEA-FTNQLLEGLNIKINDKMKIEVLYDE 65 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYG---QFEPPALYDHVVKMVEMGKYDNH 118 +I A ++IS P Y +A +L + + K+ G P + + + K ++ YD Sbjct: 66 LINTAVNMISPLYPMYDTIAEKLYLMKIYKETCGLKKIGSYPHIKNFLKKGIKYKIYDKD 125 Query: 119 LLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 +++ +T++E ++++ ID +RD+ F+Y + KY + + E Q Y++ A Sbjct: 126 IIQLFTDKELDKINSMIDPNRDLLFTYKGLAIFYKKYC--KNIGNKKLELPQITYMVAAM 183 Query: 179 CLFSNY------------PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCV 226 F + + RL+Y+KR YD +S +++ TP ++ T Q +SC+ Sbjct: 184 FSFYDDYYKGENKDKLEISKSERLKYIKRTYDMLSRHEVTFATPRIANSMTIKAQLASCI 243 Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ 286 L D S+N T + Y GI +A IRA GS I+ G IPF K + Sbjct: 244 LNTPADDTWSLNQTDGNMALYSKFSGGIAYDASYIRASGSTIQTNRGRSDGPIPFIKRVE 303 Query: 287 TAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR 346 + S +QGGVR GA + +P WHL+V L++LK+ G E R R + Y ++I+ + R Sbjct: 304 QTISSFNQGGVRKGACVVTFPWWHLDVLDLIMLKDAGGTEDTRARKLVYSIRISNIFRER 363 Query: 347 LLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQER 406 + K +TLF P + P L + + E+F Y YE SIRK+++KA +L +++ R Sbjct: 364 VNKDGYVTLFDPKETPLLNEEY---GEKFNVAYIYYESKSSIRKKKIKAKDLLFQILKVR 420 Query: 407 ASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND------------ 454 TG +Y+ VD+ N + + + SNLC EI +P+ P + + Sbjct: 421 QETGNLYLTFVDNINEQNMVNRFVG---ASNLCQEIVIPSYPSKLIKEKYVINEDGEYEI 477 Query: 455 ----ENGEIALCTLSAFNLGAINNL--DELEELAILAVRALDALLDYQDYPIPAAKRGAM 508 ++GEI +C L + NL + N ++ + +R D ++D Q YP+ + Sbjct: 478 IQRKKSGEIGICNLVSVNLMSWVNFSPEKKKSFCYTLLRGCDNIIDTQFYPVKEGEIANK 537 Query: 509 GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWF 568 R +GIGVIN+A LA + +Y+D A T+K F+ + Y++ +ASN LA+E+G F Sbjct: 538 KNRPIGIGVINYANLLASNKIKYTDKEALEFTNKVFDDLYYHIYEASNILARERGPYKTF 597 Query: 569 NETTYAKGILPIDTYKKDLDTIANEPLHYD---WEALRESIKTHGLRNSTLSALMPSETS 625 NE+ + +G+ P + + N + D W+ L E+IK +G+R S A+ P+ TS Sbjct: 598 NESKWKEGLTPFHISLLNNNKKNNLNVSVDKEKWDKLAENIKNNGVRFSFHGAIAPTATS 657 Query: 626 SQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIM 685 + +AT IEP I+ L +VP+ + + YE W +P ++L + Sbjct: 658 GKSVSATESIEPIVDLFFIEEGIQ-TLPSLVPNIKKNREYYERCWNIPA-KTIIELAAVR 715 Query: 686 QKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDL 745 Q++IDQS S N Y ++L D+ A G+KTLYY T + Sbjct: 716 QRYIDQSQSLNLYYVKPD------SAKELWDDIQYAMDLGLKTLYYMKTPKSNFEL---- 765 Query: 746 VPSIQDDGCESGA 758 ++ CES Sbjct: 766 -----EEVCESCT 773 >UniRef50_A7KUZ9 Nrd alpha subunit n=2 Tax=root RepID=A7KUZ9_9CAUD Length = 767 Score = 571 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 173/776 (22%), Positives = 309/776 (39%), Gaps = 76/776 (9%) Query: 26 LDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLA 85 L+ A++ + +++ + + I A + I APD+ ++AA + Sbjct: 22 LERASKEYNL-DATKIIEKVKRLSH---TEDKALHNSIFYALNNIDMGAPDWTFVAANMK 77 Query: 86 IFHLRKKAYG------QFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDR 139 + + K A + + Y + + EMG Y +L Y+EEE ++ ID + Sbjct: 78 LQQMYKTASENRGYSRSLKYGSFYKLIKTLTEMGIYSPAILASYSEEEINEIGRMIDPSK 137 Query: 140 DMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDA 199 D F++ + L +Y + G +YE Q +++A N P+ TRL ++K Y A Sbjct: 138 DSLFNFIGLFLLNDRYAATD-YQGSLYELPQERLMMIAVTTMINEPKATRLAHIKELYWA 196 Query: 200 VSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAG 259 +S + TP + Q SSC + + DSLD I ++ + G+ + Sbjct: 197 LSNLYATAATPTFANAGKSYGQLSSCFIDKVDDSLDGIYLSNMDAARLSKDGGGVALYFS 256 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 ++RALGSPI+G E +G P+ K F + Q G R GA ++ + H ++ L L Sbjct: 257 KVRALGSPIKGFEGKSSGTTPWIKMFNQTAITVDQLGQRKGAFAIYMCLDHKDIMKFLEL 316 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTR---LLKG----EDITLFSPSDVPG--------- 363 N G E +R R + GV + L + + + F P + Sbjct: 317 GLNNGDEADRAREIFTGVAVPDLFMKKLDEVDENGRSIGQWHTFCPHQIKQHMQWKDENG 376 Query: 364 ----LYDAFFA-DQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 L D + D + +E Y + + + + +A+++ +M+ + TG Y+ D Sbjct: 377 NLLTLDDFYDEKDTKYYEEKYMEAVNNPLLPRDTHRAMDIMVRIMEIQLETGMPYMFYRD 436 Query: 419 HCNTHSPFDPAIA----PVRQSNLCLEIALPTKPLNDVND------------ENGEIALC 462 N +P + SNLC EIA + + GE +C Sbjct: 437 QVNRMNPNKHVHGIGRTAIYCSNLCTEIAQNQVSSMIIGEYIDENENIHMVRSPGEYVVC 496 Query: 463 TLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAY 522 L++ NL L + + R LD ++D + A R +G+G + + Sbjct: 497 NLASVNLAKAVPAGVLARVIRIVTRMLDNIIDINTISVLQAGITNKRYRPIGMGAYGWHH 556 Query: 523 YLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDT 582 LA G + +A N +E Y+++ +S ELAKE+G +F + + G Sbjct: 557 LLAILGLDWESEAAVNYADTLYEEFAYHVIDSSVELAKEKGTYKYFEGSAWHTGEYF--- 613 Query: 583 YKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYV 642 + + W+AL+E + G+RN + AL P+ T++++ +T+G +P Sbjct: 614 -------DQRDYVSAKWKALKEKVAKFGVRNGWMMALAPNATTAKVGGSTDGNDPITAVE 666 Query: 643 SIKASKDGILRQVVPDYEH-LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDP 701 + + + P +H ++ Y ++ Q+ IDQSIS N Sbjct: 667 GAEEKGNFKFKVTAPGLDHNTYNVYRKTRHHIDQLWSVKQTAKKQRHIDQSISFNLYVA- 725 Query: 702 SRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESG 757 + +LL TA+K G+KT YY CE+ Sbjct: 726 -----SDIDGAELLNIHKTAHKLGIKTTYYVK-----------GESQKLKADCEAC 765 >UniRef50_Q3ZZA0 Ribonucleoside-diphosphate reductase n=27 Tax=cellular organisms RepID=Q3ZZA0_DEHSC Length = 761 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 119/656 (18%), Positives = 228/656 (34%), Gaps = 128/656 (19%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY----PRETRLQYVKRF 196 + + A+ LE +YL +++ G+ E+ + ++ VA + P+ F Sbjct: 20 LKLTDNAMCVLERRYLKKDK-QGKTTETVEDMFRRVARTIAMGELIYNPKADVRSREDEF 78 Query: 197 YDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGI 256 ++ ++ + +P + Q S+C ++ DS++SI G G Sbjct: 79 FNLMTRLEFLPNSPTLMNAGRELGQLSACFVLPVDDSIESIFDAVKHTAMIHKSGGGTGF 138 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 + R+R + +G + F + F A QGG R GA + H ++ Sbjct: 139 SFSRLRPEQDRVGTTGGVASGPVSFMRAFDVATDVIKQGGTRRGANMAILSIDHPDIMKF 198 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 + K+ GV + + + V I + G D L +P + Sbjct: 199 VHAKDKAGV----LTNFNLSVAITDKFMQAVKDGVDYDLLNPHN---------------- 238 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 + A E+F+ ++ TG I +D N ++P P + + + Sbjct: 239 ----------GEVVSSLNASEVFNKIVHMAWKTGDPGIVFIDRINAYNP-TPQLGRIEST 287 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------NNLDELEELAILAVR 487 N C E L C L + NL + + +L + AVR Sbjct: 288 NPCGEQPLLP------------YESCNLGSINLSRMVTVSGGQNTVDYKKLSRVIKSAVR 335 Query: 488 ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 LD ++D +P+P R +G+GV+ FA L + G Y+ ++ L + + Sbjct: 336 FLDNVIDVNKFPLPQIDEMTKKSRKIGLGVMGFADMLLELGVPYNSENSIKLAEEIMCFV 395 Query: 548 QYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 K S+ELA E+G P + + Y K P Sbjct: 396 NDEAHKFSSELAVERGVFPAYRGSIYEKSGRP---------------------------- 427 Query: 608 THGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI-LRQVVPDYE------ 660 +RN++ + + P+ T S I+ ++GIEP + DG + +V P +E Sbjct: 428 ---MRNASCTTIAPTGTLSIIAGCSSGIEPHFALCFTRNILDGTKMIEVNPYFERAAKEG 484 Query: 661 ------------------------HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISAN 696 D + ++ + ++++ QK D ++S Sbjct: 485 GYYSEELIKSLAEGAHLDEVDVPQDAKDLFVTAHQIV-PEWHVRIQAAFQKCTDNAVSKT 543 Query: 697 TNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQ 750 N+ S + + A+ +K T+Y +R+ + I+ Sbjct: 544 VNF------SRDAGECDVAEVYKMAHARNLKGITIYRDGSREDQPMSTGKAENKIE 593 >UniRef50_B7R7T8 Ribonucleoside-diphosphate reductase n=2 Tax=Thermoanaerobacteraceae RepID=B7R7T8_9THEO Length = 724 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 133/628 (21%), Positives = 251/628 (39%), Gaps = 70/628 (11%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVST 202 ++ K +Y +++R + + + ++ VA + +N E + FY +S Sbjct: 5 WNEQREKVFLDRYALKDREGKPVEKKPEEMFKRVAKAIATNEKEE------EMFYKVMSE 58 Query: 203 FKISLPTPIMSGVRTPTR-QFSSCVLIECG--------DSLDSINATSSAIVKYVSQRAG 253 +K I++G T + +C +I DS +I T + +++ S+ G Sbjct: 59 WKFIPGGRILAGAGTGREVTYFNCFVIPVEANDPKKGNDSRAAIMDTIAKMLEINSRGGG 118 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 +GIN +R G+ ++G +G + + QGG R A WH ++ Sbjct: 119 VGINWSTLRPRGAYVKGVGGTSSGAVSWMLAANEVATQVEQGGSRRAALMFMLWDWHPDI 178 Query: 314 ESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYD-AFFADQ 372 E + +K + +++ + V ++ + + + L P YD + D Sbjct: 179 EEFIKVKK----DLTKMQQANLSVAVSDAFMEAVAQDKMWKLEFPDTSHPNYDAEWKGDL 234 Query: 373 EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP 432 E+ K + ++ + + A EL++ ++ + + ++ N S I Sbjct: 235 NEW-----KAKGYPTVVYKEIPARELWNKIVTAAWESAEPGVVFLERYNKLSN-TYYITK 288 Query: 433 VRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELAILAVR 487 + +N C E+ L +C L A NL A N +ELEE +AVR Sbjct: 289 IISTNPCGELGLEP------------YGVCNLGAINLVAFVENGRINFEELEETVKIAVR 336 Query: 488 ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 LD +LD Y +P K A R +G+G++ A L RY + T + + I Sbjct: 337 FLDNVLDLGAYVLPQNKEMAQKLRRVGLGLMGLADALILMNLRYGSEESLKATEEIVKRI 396 Query: 548 QYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 + +AS ELAKE+G P F Y KG + +R+ I Sbjct: 397 RDAAYRASVELAKEKGPFPEFVADKYLKGQFIQRLP----------------KDIRDEIA 440 Query: 608 THGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYE 667 +G+RN+T+ P+ T+S ++ ++GIEP ++ + G V + + A+ Sbjct: 441 KYGIRNATILTQAPTGTTSILAGVSSGIEPNFAKEYVRKDRTGT--HTVKHWLADYPAFV 498 Query: 668 LLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK 727 E+ + ++++ ++QK+ID SIS N + + + AY+ G K Sbjct: 499 SAHEV-TPEEHVKMQAVLQKYIDSSISKTINLPRT------ATVDDIDNIYRLAYELGCK 551 Query: 728 --TLYYQNTRDGAEDAQDDLVPSIQDDG 753 T+Y +R+G + Sbjct: 552 GITVYRDGSREGVLVTDTKPQEKTKITE 579 >UniRef50_B8J271 Ribonucleoside-diphosphate reductase n=11 Tax=Bacteria RepID=B8J271_DESDA Length = 781 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 126/659 (19%), Positives = 229/659 (34%), Gaps = 134/659 (20%) Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRL-----QYVKRFYDAVSTFK 204 L+ +YL +N + G+I E+ + L+ VAA + + Q + FYD ++++K Sbjct: 20 VLQKRYLRKN-LDGKIIEAPRDLFWRVAAAIAAQEENYKNSSRTPNQLARDFYDLMTSWK 78 Query: 205 ISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRAL 264 +P + T Q S+C ++ GDS++ I G G + R+R Sbjct: 79 FLPNSPTLMNAGTELGQLSACFVLPVGDSIEEIFDAVKYAAMIHKSGGGTGFSFSRLRPK 138 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 S + +G + F + F TA + QGG R GA + H ++ + K G Sbjct: 139 DSRVGSTGGVASGPVSFLRIFNTATEQIKQGGTRRGANMGILRVDHPDILEFIRAKEKEG 198 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK 384 + + V + + + E L SP++ Sbjct: 199 E----FNNFNLSVGLTESFMQAVENDEQYDLVSPNN------------------------ 230 Query: 385 DDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIAL 444 +R+ A ++F L++++ +G I +D N +P P + +N C E L Sbjct: 231 --GEVMKRLPARDVFDLLVRKAWQSGDPGIVFLDRINRDNP-TPDQGEIESTNPCGEQPL 287 Query: 445 PTKPLNDVNDENGEIALCTLSAFNLGAI--------------NNLDELEELAILAVRALD 490 C L + NL + DEL + L+VR LD Sbjct: 288 LP------------FEACNLGSINLSCFHVPGHENSADPAAGIDWDELRRVVHLSVRFLD 335 Query: 491 ALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYY 550 ++D +P+ R +G+GV+ FA L + G Y +L + +Q Sbjct: 336 NVIDASRFPLDRIGETVRKNRKIGLGVMGFADLLFQLGVPYDSQQGLDLGERIMAFVQGE 395 Query: 551 LLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHG 610 +AS ELA E+G P + + +A+ L Sbjct: 396 GHRASAELALERGPFPAYGSSVFARKKL------------------------------GP 425 Query: 611 LRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI------------------- 651 RN+T++ + P+ T S I+ ++G+EP + DG Sbjct: 426 YRNATVTTIAPTGTLSIIAGCSSGVEPLFALCFTRNILDGERLVEINPHFEAALESGGLF 485 Query: 652 -------------LRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTN 698 ++ + L + ++ +L++ Q+ D ++S N Sbjct: 486 SHELMDAVVAKGSIQDMDYLPAPLRKTFVTAMDIA-PQWHLRMQAAFQRHTDNAVSKTVN 544 Query: 699 YDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDGCE 755 S Q + + AY+ G K T+Y + A + + E Sbjct: 545 L------SNSATEQDIREIYWLAYQEGCKGVTVYRDGCKSIQVLATGEGQKKMDSGSAE 597 >UniRef50_A3EPA5 Ribonucleoside-diphosphate reductase n=3 Tax=Leptospirillum RepID=A3EPA5_9BACT Length = 732 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 121/657 (18%), Positives = 222/657 (33%), Gaps = 133/657 (20%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS-NYPRETRLQYVKRFYDA 199 + S A+K LE +YL ++ G + E+ + ++ +A + S N R + +Y Sbjct: 7 LNLSDNALKVLEKRYLGKDEA-GIVRENPEQMFRRIADAIASSNSQSSEREFLAEEYYRF 65 Query: 200 VSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAG 259 +++ +P + P Q S+C ++ GDS+ I T A G G + Sbjct: 66 MASLDFLPNSPTIMNAGRPLGQLSACFVLPVGDSMPEIFDTVKATALIHQTGGGTGFSFS 125 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 R+R G+ +R +G + F K + + QGG R GA + H ++ + Sbjct: 126 RLRPKGAVVRSTGGQASGPVSFMKVINASTDAIKQGGTRRGANMGILRVDHPDILEFIDC 185 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 K + +V + + V I + + + + L +P + Sbjct: 186 KM----DLTQVTNFNISVAITDVFMQAVKEDGEYDLIAPHN------------------- 222 Query: 380 TKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLC 439 R++A E+F + + G + +D N +P P+ +N C Sbjct: 223 -------GEVVGRLRAREVFDKIAHNAWANGEPGLFFIDTANRANP-TPSRWTYEATNPC 274 Query: 440 LEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVRAL 489 E L G C L + NL + + L LAVR L Sbjct: 275 GEQVL------------GPYESCNLGSINLERHVRSSATGKPEVDWERLGRSVYLAVRFL 322 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 D ++D +PIP G R +G+G++ FA L + Y + K I+ Sbjct: 323 DNVVDANRFPIPELAAVNQGTRRIGLGIMGFARLLMRLEIPYDSEEGLEMAEKVMSFIRD 382 Query: 550 YLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH 609 + S +LAK G P++ K Sbjct: 383 EAERTSQDLAKVHGPFPYYEGIGTRK---------------------------------- 408 Query: 610 GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI------------------ 651 RNS L + P+ T S I++ ++G EP + K DG Sbjct: 409 --RNSHLLTIAPTGTISMIADTSSGCEPEFSIIWYKNVMDGTHLPYTLEMFEIVARREGF 466 Query: 652 ---------------LRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISAN 696 R + E + ++ ++++ QK+ID ++S Sbjct: 467 WSDGLAEKIVQNHGSCRGLSEVPEKWQKVFATAHDIA-PRWHVRMQAAFQKYIDAAVSKT 525 Query: 697 TNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQD 751 N + ++ + L +++ G K T+Y +R ++ Sbjct: 526 INLP------QEATVEDVEDAYLLSFELGCKGITVYRDGSRHNQVLNLGTNAKEKKE 576 >UniRef50_B5Y7X0 Ribonucleoside-diphosphate reductase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7X0_COPPD Length = 796 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 125/668 (18%), Positives = 227/668 (33%), Gaps = 134/668 (20%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP-----RETRLQYVKR 195 + +S A++ LE +YL+++ G I E+ + L VA L E + Sbjct: 3 LEWSETALRVLEQRYLLRDE-NGNIVETPEQLMHRVAHGLAQIETVWGATSEQISSVEQD 61 Query: 196 FYDAVSTFKISLPTPIMSGVRTP-------TRQFSSCVLIECGDSLDSINATSSAIVKYV 248 F+D + TP + P R S+C+++ DS+D I T K + Sbjct: 62 FFDILWKRDFLPNTPTLFHAGLPKDPKYRGRRFMSACIVLPIEDSIDGIFKTLWDAAKIM 121 Query: 249 SQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPM 308 G+G R+R GS ++ +G + F + V +QGG R GA + Sbjct: 122 QAGGGVGYAFSRLRPKGSLVKSSGGKSSGPVSFMHIYDVMVDVVAQGGKRRGAQMGVLNV 181 Query: 309 WHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF 368 H ++ + K + + + V + + + L +P Sbjct: 182 HHPDILEFIDAKKENTSGQGPLHNFNISVAVTEEFVQAYKEDTTFKLVAPHT-------- 233 Query: 369 FADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 + A E+ + + TG I +D N D Sbjct: 234 ------------------GEVVGELNAREVMHKIAENAWRTGDPGIIFIDRINQLDYLDD 275 Query: 429 AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------NNLDELE 479 + +N C E LP C L + NL + + ++ + Sbjct: 276 --GRIEATNPCGEQPLPP------------YGSCNLGSINLKHMLKKTDSGYQWDWEKFQ 321 Query: 480 ELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNL 539 LAVR LD +++ DYPIP + A R +G+GV+ +A L+ G Y A Sbjct: 322 RTIRLAVRFLDNVIEANDYPIPELEDYAKKARRIGLGVMGWADALSLLGIPYDSEEALEE 381 Query: 540 THKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDW 599 K ++ AS ELA+E+G +++++ + + +P Sbjct: 382 ARKVGAFLKEKSHLASQELAQERGVFEFYDQSKWKELGIP-------------------- 421 Query: 600 EALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQV---- 655 +RN+ ++ + P+ T S ++N +GIEP + G +V Sbjct: 422 -----------MRNAAVTTIAPTGTLSILANVNSGIEPYFALAFERKITAGTFHEVQPTL 470 Query: 656 ----------------------------VPDYEHLHDAYELLWEMPGNDGYLQLVGIMQK 687 E + +A+ E+ + ++++ Q+ Sbjct: 471 LDVLKERELYSEELVQRIIENEGKLRDLEDLPEDIRNAFPTAMEVA-PEWHVRMQAAWQE 529 Query: 688 FIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDL 745 ID SIS N ++ + L AY+ G K T+Y + + Sbjct: 530 NIDSSISKTVNLPYQS------TVEDIENIYLLAYELGTKSITVYRDKSLELQVLNVPST 583 Query: 746 VPSIQDDG 753 P + Sbjct: 584 SPKERSSE 591 >UniRef50_B0KCF5 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=B0KCF5_THEP3 Length = 770 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 127/643 (19%), Positives = 233/643 (36%), Gaps = 129/643 (20%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY----PRETRLQYVKRF 196 M + A K LE +YL ++ G+ E+ + ++ VA + KRF Sbjct: 1 MKITENARKVLEKRYLAKDE-NGKPIETVEEMFERVAKTIAEVDLIYDQNADVEAVKKRF 59 Query: 197 YDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGI 256 YD + +P + P Q S+C ++ GDS++ I G G Sbjct: 60 YDMMVDLDFLPNSPTLMNAGRPLGQLSACFVLPVGDSMEEIFDAVKYAAIIHKSGGGTGF 119 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 + R+R G+ +R +G + F K F A ++ QGG R GA + H ++ Sbjct: 120 SFSRLRPKGATVRSTGGVASGPVSFMKVFNAATEAVKQGGTRRGANMGILRVDHPDILEF 179 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 + K + + + + V I + + + + L P Sbjct: 180 IQCKKDNNE----ITNFNISVAITEEFMKAVEEDREYDLIDPHT---------------- 219 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 R++A E+F L+++ G I +D N +P P + + + Sbjct: 220 ----------GKVVNRLRAREVFDLIVEMAWRNGEPGIVFLDRINEKNP-TPEVGEIEST 268 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------NNLDELEELAILAVR 487 N C E L C L + NL + + D+L E AV Sbjct: 269 NPCGEQPLLP------------YESCNLGSINLENMLKKVEGRYVIDYDKLRETVYDAVH 316 Query: 488 ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 LD ++D YP+P + G R +G+GV+ FA L + G Y A L + E I Sbjct: 317 FLDNVIDANKYPLPQIEEMTKGTRKIGLGVMGFANMLLRLGIPYDSDEAVKLGEELMEFI 376 Query: 548 QYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 +AS +LA+++G +++++ Y K Sbjct: 377 DETSKEASIKLAEQRGTFGFYDKSIYKK-------------------------------M 405 Query: 608 THGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS-------------------- 647 +RN+T + + P+ T S I+ ++GIEP + Sbjct: 406 GIKIRNATTTTIAPTGTISIIAGTSSGIEPVFAIAMTRNVMDNTELVEVNPVFKEVAIER 465 Query: 648 ------------KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISA 695 + G L+ + E + + + ++ + ++++ QK +D ++S Sbjct: 466 GFYSEELMREIARRGSLKDIKGIPEDVKRVFVIAHDIDH-EWHVKMQAAFQKHVDNAVSK 524 Query: 696 NTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 N+ + ++ + + L AYK G K T+Y +R+ Sbjct: 525 TVNF------RNEATVEDVRRTYLLAYKLGCKGVTIYRDGSRE 561 >UniRef50_B8HJ14 Ribonucleoside-diphosphate reductase n=158 Tax=root RepID=B8HJ14_ARTCA Length = 726 Score = 555 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 162/704 (23%), Positives = 278/704 (39%), Gaps = 50/704 (7%) Query: 78 QYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDH 137 AAR F L + + +VE Y+ LLE Y E K + Sbjct: 47 DREAARQYFKQ-HVNMNTVF-FHDLAEKLDYLVENRYYEPELLEQYGFEFVKSLFQRAYK 104 Query: 138 DRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFY 197 + ++ + Y ++ E + +VA L + ++ Sbjct: 105 KKFRFETFLGAFKFYTSYTLKTFDGKRFLERYEDRVTMVALGLAAGDK-----ALAEKLV 159 Query: 198 DAVSTFKISLPTPIMSGVRTP-TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGI 256 D + + TP + SC L+ D+++SI+ ++ ++ + G+ Sbjct: 160 DEIIDGRFQPATPTFLNSGKAQRGELVSCFLLRIEDNMESISRAINSALQLSKRGGGVAF 219 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 +R G+PI+ E +G IP K + + +Q G R GA ++ H ++ Sbjct: 220 ALTNVRETGAPIKQIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHAHHPDIYRF 279 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 L K E R++ + GV I + + K ED+ LFSP DV +Y F+D E Sbjct: 280 LDTKRENADEKIRIKTLSLGVVIPDITFELAKKDEDMYLFSPYDVEKVYGMPFSDINVTE 339 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 + Y D I+K ++KA E F + + + +G YI D N +P + + S Sbjct: 340 KYYE-MVDDARIKKTKIKAREFFQTLAEIQFESGYPYIMFEDTVNRANPIE---GKIIMS 395 Query: 437 NLCLEIALPTKPLNDVN------DENGEIALCTLSAFNLGAINNLDELEELAILAVRALD 490 NLC EI + P D G+ C L + N+ + +L +A+RAL Sbjct: 396 NLCSEILQVSTPTTYNENLNYEVDGIGKDISCNLGSMNIAKAMDGGDLGATVEIAIRALT 455 Query: 491 ALLD-YQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 A+ D + + RG +G+G +N +LA+ Y + + K A+ + Sbjct: 456 AVSDQSNITAVESVARGNRMSHAIGLGQMNLHGFLAREHVYYGSPESIDFFGKYMAAVAF 515 Query: 550 YLLKASNELAKEQG-ACPWFNETTYAKGILPIDTYKKDLDTIANE-------------PL 595 + ++ASN +AKE+G F + YA G D Y E P Sbjct: 516 HAIRASNLIAKERGVTFDGFERSKYASGEF-FDKYVTRSWLPTTERGQELFAKFGITLPT 574 Query: 596 HYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKA-SKDGILRQ 654 DWE L+ S+ HG+ N L A+ P+ + S I+N+T I P + I+ K G Sbjct: 575 IADWEELKASVMEHGIYNQNLQAVPPTGSISYINNSTASIHPIAAKIEIRKEGKIGRTYF 634 Query: 655 VVPDY-EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQ 713 P + Y+ +E+ G + + + + +DQ +S + + + Sbjct: 635 PAPYLTNENLEYYQDAYEI-GYEKIVDMYAAATEHVDQGLSLTLFFKDT------ATTRD 687 Query: 714 LLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESG 757 + K + A+K G+KT+YY R A + + GC S Sbjct: 688 INKAQIYAWKKGIKTIYYIRLRQMALEGT-------EVTGCVSC 724 >UniRef50_D0ME23 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0ME23_RHOM4 Length = 620 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 133/645 (20%), Positives = 237/645 (36%), Gaps = 77/645 (11%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKIS 206 + + KY + ++ + + VA L + P R ++ +RFY + FK Sbjct: 18 SWHVWDAKYRYR-EGNVVRDQTIEDTWRRVARALAAAEPESERARWAERFYQVLYGFKFL 76 Query: 207 LPTPIMSGVRTPTR-QFSSCVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRAL 264 I++G T R +C ++ DSLD I + + Q G+G + +R Sbjct: 77 PGGRILAGAGTRHRVTLFNCFVMGIIEDSLDGIFDSLKEGALTMQQGGGVGYDFSTLRPA 136 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 G+ R +G + F + + G R GA H ++E+ + K+ G Sbjct: 137 GTRARTTGTIASGPVSFMHIWDAMCATLLSTGARRGAMMATLRCDHPDIETFVTAKHRPG 196 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE- 383 V + H + VQ+ + + D L P L D D R +T + Sbjct: 197 V----LTHFNLSVQVFDEFMEAVRRDADWPLVFP--AAALEDEGMGDGPIVYRRWTGTDG 250 Query: 384 KDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIA 443 + VKA L+ +++ + +D N + + +N C E Sbjct: 251 PVPCRVLRVVKARALWEQILRATYDYAEPGVLFIDTINRMNNL-AYREHITATNPCGEQP 309 Query: 444 LPTKPLNDVNDENGEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDALL 493 LP C L + NL + + + E +AVR LD ++ Sbjct: 310 LPP------------YGACDLGSINLTRFVRAPFTPEADLDWEGIRETVAVAVRMLDNVI 357 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 D +P+PA A G R +G+G+ A L G Y+ A L + + I + + Sbjct: 358 DVSGFPLPAQAEQARGTRRIGLGITGLADALIMLGLHYASEEARQLAARVMQTICHTAYR 417 Query: 554 ASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 S LA+E+G P+F Y + + E +R+ I T+G+RN Sbjct: 418 TSIALAREKGVFPFFERERYLESPF----------------IQALPEDIRKGIATYGIRN 461 Query: 614 STLSALMPSETSSQIS-NATNGIEPPRGYVSIK---------------ASKDGILRQVVP 657 S L ++ P+ T S ++ N ++GIEP Y + + +++ Sbjct: 462 SHLLSIAPTGTISLLANNVSSGIEPVFAYRYTRYILGLDGERRAYTLTDYALRLWQRLHG 521 Query: 658 DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKD 717 D E L +A+ + D +L++ +Q ++D +IS N P + Sbjct: 522 DSEMLPEAFVDAQHLDPYD-HLKMQAALQPYVDGAISKTVNVP------ADTPFNAFRQL 574 Query: 718 LLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDGCESGACK 760 AY G+K T Y + GA + + + + Sbjct: 575 YDWAYDHGLKGCTTYRPSPVRGAVLEAIT---AGVAESTHCCSIE 616 >UniRef50_Q67KQ2 Ribonucleoside-diphosphate reductase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KQ2_SYMTH Length = 776 Score = 550 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 120/673 (17%), Positives = 226/673 (33%), Gaps = 145/673 (21%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQ-----YVKR 195 M ++ A +E +YL E+ + VA + + + + +R Sbjct: 1 MELTHIAKTVMEKRYLRMKEDGTR--ETPDEMLRRVARVIAAVEEKYGASKKEIRAVEER 58 Query: 196 FYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIG 255 FY + +P +G T Q S+C ++ GDSL I T G G Sbjct: 59 FYQLMDRQDFMPNSPTFTGAGTALGQLSACFVLPVGDSLPEIYETMKQAALIHQTGGGTG 118 Query: 256 INAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVES 315 R+R G +R + +G + F + + + ++ QGG R GA + H ++ Sbjct: 119 FAFSRLRPAGDVVRSSQGVASGPVSFLRVYNASTEAIKQGGTRRGANMGILRVDHPDILQ 178 Query: 316 LLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEF 375 + K + ++ + + V I L KG + L +P + Sbjct: 179 FIESK----ADITQITNFNISVAITDAFMEALEKGTEYELINPRN--------------- 219 Query: 376 ERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQ 435 ++ A ++ +++ TG I +D N +P + + + Sbjct: 220 -----------GEVTGKLSAKLVWDKLVENAWKTGEPGIVFIDRINRRNP-NNHVEVIEA 267 Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILA 485 +N C E LP C L + NL + + L E+A A Sbjct: 268 TNPCGEQPLPP------------YGSCNLGSINLANFVKNPYTDRAEVDWERLGEVARTA 315 Query: 486 VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFE 545 R LD ++D YP+P A+ R +G+G++ +A L + G Y A L ++ Sbjct: 316 TRFLDNVIDANKYPLPQIAEKALRDRRIGLGIMGWAEMLVQMGLPYDSEEAVALGNRVMT 375 Query: 546 AIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRES 605 I+ L+ S LA+ +G P + + + K L Sbjct: 376 FIKQKALEESMALAEVRGPYPEWEGSQWHKAGLK-------------------------- 409 Query: 606 IKTHGLRNSTLSALMPSETSSQISN-----ATNGIEPPRGYVSIKASK------------ 648 +RN+TL+ + P+ T S + + GIEP V + Sbjct: 410 -----VRNATLTTVAPTGTISLFAARPDLPCSGGIEPKFALVFTRNQAGALMLDVDGQFA 464 Query: 649 -------------------DGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIM---- 685 G R V E + ++ + ++++ Sbjct: 465 SIARREGWYSDELMQQVADRGTARGVSGVPEKWQRIFATSHDI-TPEWHVRMQAAFQGGD 523 Query: 686 -----QKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGA 738 Q+ +D ++S N+ ++ + K A++ G+K T+Y +R Sbjct: 524 GLPVDQQPVDAAVSKTINFPH------HATVEDVGKSYALAWQLGLKGITVYRDGSRASQ 577 Query: 739 EDAQDDLVPSIQD 751 D ++ Sbjct: 578 VLTTGDKTKKQEE 590 >UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=cellular organisms RepID=A9A645_NITMS Length = 884 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 156/830 (18%), Positives = 291/830 (35%), Gaps = 157/830 (18%) Query: 7 VTKRDGSTERINLDKIHRVL-------DWAAEGLHNVSISQVELRSHIQFYDGI---KTS 56 + KR G+ N DKI + A GL + V + Q + Sbjct: 13 IRKRSGAVTAFNKDKISNAIYKALAATSKADRGLADQLADNVVNKLVEQGFTSTRSPTVE 72 Query: 57 DIHETIIKAAAD----LISRDAPDYQ--------------------------------YL 80 DI + + D I++ Y+ L Sbjct: 73 DIQDIVESTLIDSGNSDIAKAYIVYRHERRKLRDEKMKVLNLKALDPVSKKFDLNCLRVL 132 Query: 81 AARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGK--YDNHLLED--YTEEEFKQMDTFID 136 A+R + + + P +++ V +V +G YD + + T+++ ++ ++++ Sbjct: 133 ASRYLFRNGKNEIIE--SPTQMFERVAILVGIGDLMYDAQVFDKSGNTKQDVEEAKSYLE 190 Query: 137 HDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA----ACLFSNYPRETRLQY 192 + + K+ ++ + A ++ ++ L + + Sbjct: 191 KLDAFDYKFKVGDYFFNKWHFRSLIN-HYVTLANKGHMKISFKELLTLLAAKKLDGYADK 249 Query: 193 VKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRA 252 + ++D + + +P M Q S+C ++ D ++ I ++S Sbjct: 250 ITEYFDLMVSQDFLPNSPTMMNAGGRLGQLSACFVLGMQDGMEEIMKSTSDAALIFKSGG 309 Query: 253 GIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLE 312 G+GIN +R G + +G + F T + QGG R GA WH + Sbjct: 310 GVGINYSDLREEGDIVASTSGVASGPVSFMNIINTVTEVVKQGGKRRGANMGIIEAWHPD 369 Query: 313 VESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLK--GEDITLFSPSDVPGLYDAFFA 370 VE + K GV + + + V + + + L+ + L SP D Sbjct: 370 VEKFITNKTEPGV----LENFNVSVGVWEDFWHALVNTSDGNYVLRSPRD---------- 415 Query: 371 DQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPF-DPA 429 + + A +L L+ + + D N ++ F Sbjct: 416 ----------------KKPVKEINAHQLIDLIALSAWKSAEPGLIFFDQINKYNVFAKAR 459 Query: 430 IAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELE 479 AP+R +N C E +L C L + NL + + E Sbjct: 460 QAPLRATNPCGEQSLYP------------YESCNLGSINLVNLVKRQADGTYEFDWQRYE 507 Query: 480 ELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNL 539 E R LD ++D YP+P + R +G+GV+ A L K Y+ L Sbjct: 508 ETIRKTTRFLDNIIDVNHYPVPEINVASKESRRIGLGVMGVADLLYKLRIPYNSKEGYEL 567 Query: 540 THKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDW 599 K EA+ YY ++ S LAK +G P ++T Y +G +P+ Y + E Y+W Sbjct: 568 QSKLSEALTYYSMEESVALAKSRGEFPLCSKTEYPEGKIPVAGYYEK----PKESHSYEW 623 Query: 600 EALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGIL------- 652 +AL E IK +G+RN + + P+ T S I++ +NG+EP V K G Sbjct: 624 DALVEKIKQYGIRNVLTTTVAPTGTLSMIADCSNGMEPAFALVFEKRVTVGRFFYTNKIV 683 Query: 653 -------------------------RQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQK 687 + + + + D + ++ +D +L G+ Q Sbjct: 684 EQVLKENNLYNDEILAKIADNYGSLKGIDEIPQWMQDVFVTAMDIHWSD-HLMAQGVWQD 742 Query: 688 FIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTR 735 +I +I+ N V + + L A++ G+K T+Y +R Sbjct: 743 WIGNAIAKTINMPY------DVTAEDVKSAYLLAHEIGLKGITVYRDGSR 786 >UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyrobaculum RepID=A3MX47_PYRCJ Length = 853 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 144/831 (17%), Positives = 290/831 (34%), Gaps = 138/831 (16%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKA 65 V K +GS E +K+ R ++ AA+ +V+ + I+ + + ++ + ++ Sbjct: 3 RVLKLNGSVEPFQPEKLRRSIERAAQDAG----VEVDGAADIKVERDVGSWELAD-LVHV 57 Query: 66 AADLISRDAPDYQYLAARLAIFHLRKKAYGQ--FEPPALYDHVVKMVEMGKYDNHLLEDY 123 + + P+ +A + + K+ +G+ + ++ + + + +++ Sbjct: 58 ELLKKAIERPELAEVAKSHLLGRIYKEIFGRDFLRVKSDEEYQRRALAAFEKLAGVIKPE 117 Query: 124 TEEEFKQMDTFIDHDRDMTFSYAAVKQLEG-KYLVQNRVTGEIYESAQFLYILVAACLFS 182 E +Q+ + + D + SY A++ Y ++ R+ ++ E+ A Sbjct: 118 ALELLRQLK--LRPEFDRSLSYNALRLFTNGNYALR-RLDFQLAETPSM------AAARV 168 Query: 183 NYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI----- 237 ++ + +YD +++ K+ +P T F+SC ++ D L SI Sbjct: 169 ATAVARDVERARLYYDYITSLKLIPASPYWFNAWTSKEMFASCFILMIEDCLSSITHPGK 228 Query: 238 ---NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQ 294 + G+G + +R G +RG +G I F K F V+ Q Sbjct: 229 RCIYDVLTRSGLIQQAGGGVGYDFSLLRPEGDVVRGSAGVASGPISFMKLFDANVEVIKQ 288 Query: 295 GGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR---LLKGE 351 GG R GA +WH ++ + K + +++ + V ++ + + K Sbjct: 289 GGKRRGAQMGTLHVWHPDIRKFIKAKTGELKD-VHLQNFNISVVVDDAFMEKALDVDKDP 347 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR 411 + L +P V + E R + V A ELF +++ +G Sbjct: 348 NYPLVNPRIVVEKLGIKPIEVLELTREVQLPKDAT---VGSVNAKELFREIVEGAWDSGD 404 Query: 412 IYIQNVDHCNTHS-----PFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSA 466 + + N + D +N C E+ + +C L+ Sbjct: 405 PGLIFKSNMNASNSLLYVNVDGDRYVWFGTNPCAEVPGA------------DKDVCNLTH 452 Query: 467 FNLGAIN----------------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGR 510 NL + L E A + VR LD +D + Sbjct: 453 INLVKFVKEGCSGRTLEEKLECIDWAGLAETARVGVRFLDDAVDISTTGMKDVDETYRKI 512 Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNE 570 R +G+GV+ A L K Y+ A L ++ I L S ELA+E+G +F++ Sbjct: 513 RKIGLGVMGLAEMLIKLEIPYASWDAVTLVNRVLAWIYLNALDESAELARERGPFKYFHQ 572 Query: 571 TTYAKGILPIDTYK---------------------------------KDLDTIANEPLHY 597 + YA+G++P+ Y+ + LD +A Sbjct: 573 SDYARGVIPVLKYQDFVWSRWERVRAAYPPEYRELGDRLKAITYETRRWLDAMAKRFGKP 632 Query: 598 DWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQV-- 655 L E + G+RNS + ++ P+ +S ++ T+G+EP ++ G L + Sbjct: 633 TLAELSEKV-KGGVRNSVVMSVAPTGRTSILAGTTSGVEPVFALAFLRNVTVGTLVEYYW 691 Query: 656 ----------------------------VPDYEHLHDAYELLWEMPGNDGYLQLVGIMQK 687 P E + E+ ++ + Q+ Sbjct: 692 PGVEYLRARGLWTPEVRRAVEESGMLRDAPVPEDVKHLLATAMEIHWA-WHVLMQASAQQ 750 Query: 688 FIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 ++DQ IS N + A+ GVK T+Y ++ Sbjct: 751 WVDQGISKTINMP------ANATKDDVYWAFALAWALGVKGITVYRDKSKS 795 >UniRef50_P0A5W9 Ribonucleoside-diphosphate reductase subunit alpha n=348 Tax=Bacteria RepID=RIR1_MYCBO Length = 725 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 164/727 (22%), Positives = 293/727 (40%), Gaps = 53/727 (7%) Query: 57 DIHETIIKAAADLISRDAP---DYQYLAA-RLAIFHLRKKAYGQFEPPALYDHVVKMVEM 112 + + A +L D D AA + + H+ + + + ++ Sbjct: 24 ETDYHALNAMLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVF---FHNQDEKLDYLIRE 80 Query: 113 GKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFL 172 Y+ +L+ Y+ K + + ++ + Y ++ E + Sbjct: 81 NYYEREVLDQYSRNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDR 140 Query: 173 YILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP-TRQFSSCVLIECG 231 ++VA L + + D + + TP + SC L+ Sbjct: 141 VVMVALTLAAG-----DTALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVE 195 Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS 291 D+++SI + ++ ++ + G+ + IR G+PI+ E +G IP K + A Sbjct: 196 DNMESIGRSINSALQLSKRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSY 255 Query: 292 CSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 +Q G R GA ++ H ++ L K E R++ + GV I + + + + Sbjct: 256 ANQLGARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRND 315 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR 411 D+ LFSP DV +Y FAD E+ Y D IRK ++KA E F + + + +G Sbjct: 316 DMYLFSPYDVERVYGVPFADISVTEKYYE-MVDDARIRKTKIKAREFFQTLAELQFESGY 374 Query: 412 IYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND----ENGEIALCTLSAF 467 YI D N +P D + SNLC EI + P D + G+ C L + Sbjct: 375 PYIMFEDTVNRANPID---GKITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSL 431 Query: 468 NLGAINNLDELEELAILAVRALDALLDYQDY-PIPAAKRGAMGRRTLGIGVINFAYYLAK 526 N+ + + + +A+RAL A+ D +P+ ++G +G+G +N YLA+ Sbjct: 432 NIAKTMDSPDFAQTIEVAIRALTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLAR 491 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA-CPWFNETTYAKGILPIDTYKK 585 Y + T+ F + Y+ L+ASN +A E+G F + YA G D Y Sbjct: 492 ERIFYGSDEGIDFTNIYFYTVLYHALRASNRIAIERGTHFKGFERSKYASGEF-FDKYTD 550 Query: 586 DL-------------DTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNAT 632 + D P DW L+ES++ HG+ N L A+ P+ + S I+++T Sbjct: 551 QIWEPKTQKVRQLFADAGIRIPTQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHST 610 Query: 633 NGIEPPRGYVSIKA-SKDGILRQVVPDY-EHLHDAYELLWEMPGNDGYLQLVGIMQKFID 690 + I P V I+ K G + P + YE +E+ G + + + +D Sbjct: 611 SSIHPIVSKVEIRKEGKIGRVYYPAPYMTNDNLEYYEDAYEI-GYEKIIDTYAAATQHVD 669 Query: 691 QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQ 750 Q +S + + + + K + A++ G+KTLYY R A + + Sbjct: 670 QGLSLTLFFKDT------ATTRDVNKAQIYAWRKGIKTLYYIRLRQMALEGT-------E 716 Query: 751 DDGCESG 757 +GC S Sbjct: 717 VEGCVSC 723 >UniRef50_D1CDG6 Ribonucleoside-diphosphate reductase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDG6_THET1 Length = 811 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 133/667 (19%), Positives = 245/667 (36%), Gaps = 92/667 (13%) Query: 115 YDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYI 174 Y + E+ +++ ID R K +Y ++ + + +++ Sbjct: 6 YIDTSSIHTIEDLEREVQALIDSGRATKLEGYREKIFLDRYARKDPNGTPLEHYPEEMWL 65 Query: 175 LVAACLFSNYP-RETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR-QFSSCVLIE-CG 231 VA + + P E + Q+ RFYD + F+ I+SG + + +C +I Sbjct: 66 RVAKAIAAVEPNPEAQRQWTLRFYDILQGFRFVPGGRILSGAGSGAEVTYYNCFVIPSPE 125 Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAV-K 290 DS++ I + + + G+G+N +R G+ I+ +G + + K Sbjct: 126 DSVEGIFRNITTAAHIMRRSGGVGVNLSSLRPRGAYIKTVNGTSSGPCSWAILYSDMTGK 185 Query: 291 SCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKG 350 QGG R GA + H ++E + K + H + V ++ + K Sbjct: 186 VIIQGGSRRGALMIMLDDDHPDIEEFVEYKRKN---PGHIDHANLSVAVSDAFMEAVKKD 242 Query: 351 EDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTG 410 L K + ++A +L+ + + + Sbjct: 243 LPWDL----------------------------KWQGKVWKTIRARDLWRKIAESAWAYA 274 Query: 411 RIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG 470 + +D N S +R N C E LP +C L A NL Sbjct: 275 EPGLVFIDRYNKRSN-TWYFENIRCVNPCGEQGLPPW------------GVCNLGALNLL 321 Query: 471 AI---------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAM-GRRTLGIGVINF 520 A + ++L A +A+R LD ++D YP P + G R G+G + Sbjct: 322 AFVKHIDGETYFDFEDLANTARVAIRFLDNVIDATVYPFPENEEAQKHGARRTGLGTMGL 381 Query: 521 AYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPI 580 A L K G +Y A L + + I+ AS +LA E+G P F+ Y +G Sbjct: 382 ADVLIKLGVKYGSPEAEPLVERIYRTIRDAAYDASADLAAEKGPFPKFDRDKYMQGEFIR 441 Query: 581 DTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRG 640 + E ++ I+ G+RN+ L P+ T+S ++ +GIEP Sbjct: 442 ELP----------------EEIQAKIRRQGIRNAVLLTQAPTGTTSSLAGVNSGIEPVFA 485 Query: 641 YVSIKASKDGILRQVVPDYEH---------LHDAYELLWEMPGNDGYLQLVGIMQKFIDQ 691 +V+ + + G P + L D + ++ + ++++ ++QK+ D Sbjct: 486 FVTKRRDRLGEHLLYHPLAQEWMDAHPGKPLPDYFVSSADL-TPEEHIRIQAVVQKYTDS 544 Query: 692 SISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSI 749 SIS N ++ + + + AY G K T Y Q +RD +A D Sbjct: 545 SISKTVNGPE------DNTVEDVERLYMLAYDTGCKGITYYRQGSRDAVLEAVDTKPKEK 598 Query: 750 QDDGCES 756 + E+ Sbjct: 599 AEKPEEA 605 >UniRef50_C1A6X4 Ribonucleoside-diphosphate reductase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6X4_GEMAT Length = 859 Score = 546 bits (1408), Expect = e-154, Method: Composition-based stats. Identities = 119/669 (17%), Positives = 231/669 (34%), Gaps = 114/669 (17%) Query: 137 HDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQ----- 191 + +T S A LE +YLV+++ +G+ E + ++ VA + R Sbjct: 8 PEGLVTLSANARTVLEKRYLVKDK-SGKPVEKPEDMFWRVATTVAEADRRYGASDGAVQA 66 Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLD----SINATSSAIVKY 247 + FY ++ + +P + P Q S+C ++ D+L I T ++ Sbjct: 67 IAEEFYFLMTQRRFEPNSPTLMNAGRPLGQLSACFVLPVDDALSNGQSGIYDTLRSMALI 126 Query: 248 VSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYP 307 G G + R+R+ GS +R +G + F + + + + QGG R GA Sbjct: 127 HQSGGGTGFSFSRLRSRGSMVRSTTGVASGPVSFMQLYDASTDAVKQGGTRRGANMGILR 186 Query: 308 MWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDA 367 + H +V + K + ++ + + V I + + L P Sbjct: 187 VDHPDVMEFIACKE----DLTKITNFNISVGITTKFMDAVKADANYDLVDP--------- 233 Query: 368 FFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD 427 ++A E++ M+ TG + +D N ++P Sbjct: 234 -----------------VSKKVTGELRAREVWDKMILGAWRTGEPGVFFIDEANRYNPV- 275 Query: 428 PAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELA 482 P + +N C E L +C L + N+G + + + Sbjct: 276 PHLGDYEATNPCGEQPLLAYD------------VCNLGSVNVGHYVSNGVVDWEAMRRDI 323 Query: 483 ILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHK 542 L+ LD ++D YP+P + R +G+GV+ FA L + G Y + K Sbjct: 324 ALSTHFLDNIIDVNKYPLPEIDALSKRIRRIGLGVMGFADMLVRLGIPYDSAEGVEMGRK 383 Query: 543 TFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEAL 602 E + K S LA+E+GA P + ++ + P +T +D + P+ Sbjct: 384 VMEFLDVEGKKESERLARERGAFPEWAQSIWG----PDETCARDANGQRIRPMQL----- 434 Query: 603 RESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPD---- 658 LRN ++ + P+ T S I+ ++G+EP ++ ++ V D Sbjct: 435 --------LRNCNVTTVAPTGTISIIAGCSSGLEPLFAVAFMRNQAGVMMPDVNEDFVAI 486 Query: 659 --------------------------YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQS 692 + + + ++++ Q D + Sbjct: 487 AKAEGWYSDELMERIAKTGSVQHAEVPAKWQSVFNTANNIS-PEYHIRMQAAYQLHCDSA 545 Query: 693 ISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQ 750 IS TN+ + + + AY+ K T+Y +RD + + Sbjct: 546 ISKTTNFGFA------ATVDDVRAIYEMAYEMKCKGVTVYRDGSRDNQVLSTGATQDAAA 599 Query: 751 DDGCESGAC 759 + A Sbjct: 600 NRESAKAAV 608 >UniRef50_Q160T8 Ribonucleoside-diphosphate reductase n=25 Tax=Alphaproteobacteria RepID=Q160T8_ROSDO Length = 832 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 127/636 (19%), Positives = 227/636 (35%), Gaps = 99/636 (15%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKIS 206 A + + KY + + + + + +A L + ++FY A+ FK Sbjct: 9 AEQIWDMKYRFKAADGAPLDVTVEDTWRRIARDLARVEKTPE--VWEEKFYAALEDFKYL 66 Query: 207 LPTPIMSGVRTPTR-QFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRAL 264 I +G T +C ++ DS+ I + Q GIG + IR Sbjct: 67 PAGRITAGAGTARSVTLFNCFVMGTVPDSMGGIFDMLKEAALTMQQGGGIGYDFSTIRPK 126 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 G+ ++G A +G + F + ++ G R GA H +VE + K++ Sbjct: 127 GADVKGVAADASGPLSFMDVWDAMCRTIMSAGSRRGAMMATMRCDHPDVEDFIAAKSDPA 186 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK 384 R+R + V I + L Sbjct: 187 ----RLRMFNMSVLITDPFMEAVKADGPWDLVF--------------------------- 215 Query: 385 DDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIAL 444 D + V+A +L++ +MQ + +D N + + +N C E L Sbjct: 216 -DGKVYRTVQARDLWNRIMQATYDYAEPGVIFIDRINQANNL-SYCETIAATNPCGEQPL 273 Query: 445 PTKPLNDVNDENGEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDALLD 494 P C L + NL + + L++L AVR +D ++D Sbjct: 274 PP------------YGACLLGSINLARLVSNPFEDTAALDEAALDDLVATAVRMMDNVVD 321 Query: 495 YQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKA 554 +P+ A R A +R +G+GV A L G RY A T + +I A Sbjct: 322 ASKFPLEAQAREAQAKRRIGLGVTGLADALLMMGLRYGSDEAARQTDRWLHSIARAAYLA 381 Query: 555 SNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNS 614 S +LA+E+GA P F+ Y +A+ + E +R++++ HG+RN+ Sbjct: 382 SVDLAREKGAFPLFDADKY----------------LASGTMQAMDEDVRDAVREHGIRNA 425 Query: 615 TLSALMPSETSSQISN-ATNGIEPPRGYVSIKASKDGILRQVVPDY-------------- 659 L+++ P+ T S + ++GIEP Y + + + Sbjct: 426 LLTSIAPTGTISLYAGNVSSGIEPVFAYAYTRKVLQKDGSRTEEEVVDYAVQLWREKFGD 485 Query: 660 EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLL 719 + L D + + + ++++ QK++D SIS N + + Sbjct: 486 KELPDYFVNAQTLAPLE-HVKMQAAAQKWVDSSISKTINCPE------DIGFDAFKDVYM 538 Query: 720 TAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDG 753 A+ G K T Y N G+ + + PS QD Sbjct: 539 EAWDSGCKGCTTYRPNAVTGSVLSVSEEKPSKQDAD 574 >UniRef50_B3RGP4 Ribonucleoside triphosphate reductase alpha chain n=5 Tax=unclassified Myoviridae RepID=B3RGP4_9CAUD Length = 771 Score = 545 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 254/783 (32%), Positives = 409/783 (52%), Gaps = 44/783 (5%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 V K +G + +++++ + +G N + S + L ++ + YDG T ++++ II Sbjct: 3 TKVIKSNGCEVAFDPERLNKAAIFGDDG--NGNWSHIALDAYKRLYDGCTTKEVNQAIID 60 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQF-EPPALYDHVVKMVEMGKYDNHLLEDY 123 + + +A R+ I + K+A+G F + P+L MVE G +++ Y Sbjct: 61 SCVSRKDEEH---SRMAGRVLIGQIYKEAFGGFTKIPSLPSFYNTMVEKGYWEDM---GY 114 Query: 124 TEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN 183 + E +D IDH +D+ + YA +KQ KY +++ + ++ES Q +++ +A + N Sbjct: 115 SFTELNTLDAVIDHSKDLGYGYAVLKQFRDKYGIKDTLKDTLFESPQMMFMGIAMAVMKN 174 Query: 184 YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSA 243 P+E R+ V + Y +S KI+ PTP ++G+RT ++SC +I+ D+ SI Sbjct: 175 MPKERRINDVVKLYTYLSDLKINAPTPYLNGLRTGKTGYASCCVIKADDTAKSIGVAREV 234 Query: 244 IVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAAT 303 +AGIG R+ G +RG H G IP+Y+ VK Q RGG+AT Sbjct: 235 AYTMTVNQAGIGYYLSS-RSAGDGVRGNTIKHMGKIPYYRGIDAGVKENRQQS-RGGSAT 292 Query: 304 LFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPG 363 + + +++ L+ L+N V R+ MDY + IN+ R+ K D L S P Sbjct: 293 VSFLALDPQIDELIRLRNPMTVASKRINTMDYSIGINRSFINRVAKNLDWMLVSYKHAPQ 352 Query: 364 LY-DAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNT 422 L+ F EEF+ + KDDSI K ++A +L ++ +R GR+++ D N Sbjct: 353 LHEGIFTMSMEEFDAEVDRIAKDDSIPKTWIRARDLAVELLTQRIEVGRLFVYWTDEMNR 412 Query: 423 HSPFDPAIAPVRQSNLCLEIALPTKPLNDV------NDENGEIALCTLSAFNLGAINNLD 476 H+PF + SNLC EIALPTK +D+ + ++GE+ALC LS+ G + Sbjct: 413 HTPFKD---VIYSSNLCAEIALPTKGYSDMRNIFKHDVDDGEVALCFLSSLVAGR-VTPE 468 Query: 477 ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 E E++A V +D +++ YP + RR++G+G+ N A+++A H Y + Sbjct: 469 EYEDVAYYTVLMIDNVMEIMTYPYENMESTVKKRRSIGVGLTNVAHFIASHKVTYGSPES 528 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP-L 595 L H E Y L KAS LAKE+G C W ++T Y +G LPIDTY K++D++ +P L Sbjct: 529 KQLVHDLAELHSYSLHKASLRLAKERGVCEWMHKTKYPEGWLPIDTYNKEVDSVVKDPSL 588 Query: 596 HYDWEALRESIKTH-GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQ 654 DWE LR+ I + GLRNS L A MP+E+SS +N TNG+ P R ++ K S G + Sbjct: 589 KQDWEGLRKEIIENGGLRNSVLEAYMPNESSSLATNTTNGVYPVREHIIFKKSPQGQVLF 648 Query: 655 VVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL 714 +VPDY+ L + Y W++ ND + + ++QKF Q+ISA+ D ++ GK+ M++ Sbjct: 649 IVPDYDELKEYYTSAWDVDTND-MIDMYAVIQKFTGQAISADLYIDYTKLKDGKISMKEQ 707 Query: 715 LKDLLTAYKFGVKTLYYQNTRDGAEDAQDD-------------------LVPSIQDDGCE 755 L L+ A KFG+KT YY N+R GA D+ + S++D CE Sbjct: 708 LGYLIRATKFGMKTWYYLNSRVGAGDSLAEELHAKKQAEDETRKNYPLIADSSVEDPYCE 767 Query: 756 SGA 758 S A Sbjct: 768 SCA 770 >UniRef50_B4UA32 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA32_HYDS0 Length = 1005 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 165/693 (23%), Positives = 288/693 (41%), Gaps = 80/693 (11%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWA----------------------AEGLHNVSISQVE 42 + V KR G+ E+++L KI VL+ A E L+ ++I ++ Sbjct: 1 MEVIKRSGAREKLDLLKIRTVLENALSLLKEWKTTKDISAQDIEEWTMEDLNEINIDEIM 60 Query: 43 LRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQ-FEPPA 101 I +DGI+T+ I + I+ + + D P Y +A + + + K+A+G + P Sbjct: 61 EDIEINIFDGIETAAIFQHILHSLLTR-AIDDPIYDAMARNVLLQRIYKQAFGGMYSPKK 119 Query: 102 LY-----DHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYL 156 Y D++ VE+G D L Y + + + + RD + + L +YL Sbjct: 120 AYKELFIDYIDNAVELGLLDEKLASYY---DLEMLALELVPKRDQLLKFNGLYNLMDRYL 176 Query: 157 VQNRVTGEIYESAQFLYILVAACLFSNYP-RETRLQYVKRFYDAVSTFKISLPTPIMSGV 215 +++ TG I E+ Q+ ++ VA + E R + FY +S+ + TP + Sbjct: 177 IKDLDTGNILEAPQWFWMRVAMGVALVEKTPEDRNHWAIEFYHMMSSMEFIPSTPTLFNS 236 Query: 216 RTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFH 275 T Q SSC +++ D L I T + G+G+ A ++RA S IR + Sbjct: 237 GTRFPQLSSCFVVDEEDDLSKIFETVKQVGMLNKHAGGVGLPATKLRAKDSIIRSIQGKS 296 Query: 276 TGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDY 335 +G IPF K + + SQGG R G+A WHL+V + K G + R +++ Sbjct: 297 SGIIPFLKIIDETITAVSQGGRRRGSALASLEPWHLDVFDFVRTKRKWGDDSQRFKNLKI 356 Query: 336 GVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKD---DSIRKQR 392 + +N R+ + D LF P+D P L + ++F R Y+K + IR ++ Sbjct: 357 ALFLNDEFMRRVEENGDWYLFDPADCPKLVSTY---GKKFSREYSKCIRKALSGKIRHKK 413 Query: 393 VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDV 452 +KAVELF ++ TG + D N P + + +NLC E L + Sbjct: 414 IKAVELFKEAIENTIQTGEPWYTFKDPINIRHP-NKHTGTILTTNLCTEQLLVST----- 467 Query: 453 NDENGEIALCTLSAFNLGAI-------------------------------NNLDELEEL 481 I C L + L + ++ + + Sbjct: 468 ---YDSIESCNLGSLVLPRALLTHFRVNEHAQPLNSSENGSKHTKFLSNNTFDWEKFKAV 524 Query: 482 AILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTH 541 A+R LD ++D Y + A ++G R +G+G + + + K A L Sbjct: 525 IRKAIRFLDNVIDANYYALEAVEKGTKQSRKIGLGFMGYQDMIEKLKLPVDSKEALKLLD 584 Query: 542 KTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEA 601 K E + Y ++ S ELAKE+G P F+ + ++KGILPIDT + L + Sbjct: 585 KIGETMSYVAIETSVELAKERGTYPNFDGSDWSKGILPIDTLEH-LFRERSLTNDKYTTP 643 Query: 602 LRESIKTHGLRNSTLSALMPSETSSQISNATNG 634 + ++ + N + + +Q N++ Sbjct: 644 YNDMVQNYADENRAVQSRFDDREHAQPLNSSEN 676 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 91/228 (39%), Gaps = 42/228 (18%) Query: 537 NNLTHKTFEAIQYYLLKASNELAKE--QGACPWFNETTYAKGILPIDTYKKDLDTIANEP 594 + + + + S+++A++ + F+ K T + + + + Sbjct: 682 IDYKKLVDKYVGLQVYHDSDDIAEDESRAISSHFDAKEQDKSTTVSQTLQSSENGLEHTL 741 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQ 654 ++WE LRE + G+RN+ + L P+ T S I+ + EP V + + G + Sbjct: 742 PAFNWEELREKV-KQGIRNACQTTLAPTATISIIAGTSQSFEPYYALVYSRTNIAGRFLE 800 Query: 655 VVPD-------------------------------YEHLHDAYELLWEMPGNDGYLQLVG 683 V + + + D Y+ +E+ + Y++ Sbjct: 801 VNENFIRDLKKLGLWDRLREDVLLQQGSIQDIKEIPQEIKDIYKTAYEIDT-EVYIKQAA 859 Query: 684 IMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYY 731 ++QK+ID SIS N ++ Q++++ L A+K+G+K YY Sbjct: 860 VLQKWIDSSISRNLYFNTRDP-------QKIMEIYLKAWKYGLKATYY 900 >UniRef50_B2A494 Ribonucleoside-diphosphate reductase n=16 Tax=cellular organisms RepID=B2A494_NATTJ Length = 752 Score = 541 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 114/650 (17%), Positives = 223/650 (34%), Gaps = 127/650 (19%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP------RETRLQYVK 194 M + A LE +YL N E+ + + VA + ++ + + Sbjct: 1 MELTKNAKMVLEKRYLKTNEKGET--ENPEDMLKRVADNIAQVEKDVYQKDKQEVSKVSQ 58 Query: 195 RFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGI 254 F+D + +P + +Q ++C ++ DS++SI G Sbjct: 59 NFFDLMDNQYFMPNSPTLMNAGRELQQLAACFVLPIEDSMESIFEAIKNAALIHKSGGGT 118 Query: 255 GINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVE 314 G + +R + +G + F K F +A ++ QGG R GA + H +++ Sbjct: 119 GFSFSNLRPKNDIVLSTGGVASGPVSFMKVFNSATEAVKQGGTRRGANMGILRVDHPDIQ 178 Query: 315 SLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEE 374 + K + + + + + V I + + + + +L +P + + Sbjct: 179 EFITCKR----DSDEINNFNISVGITEEFMEAVKQDGEYSLKNPKNGQAV---------- 224 Query: 375 FERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVR 434 + ++A E+F +++ G I +D N ++P P I + Sbjct: 225 ----------------KTLRAREVFDKIVEMAWGNGEPGIVFIDKMNENNP-TPHIGEIE 267 Query: 435 QSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRAL 489 +N C E L C L + NL + + L+E AV L Sbjct: 268 STNPCGEQPLLP------------FESCNLGSVNLSKMVNNGAVDYQLLKETVHTAVHFL 315 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 D ++D YP+P ++ + R +G+GV+ F L K Y+ A +L K I Sbjct: 316 DNVIDANRYPLPEIEKTSKENRKIGLGVMGFGDMLFKLRIPYNSQEALDLAEKVMGYIDQ 375 Query: 550 YLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH 609 S ELAKE+GA P F + Y + Sbjct: 376 ESKAKSQELAKERGAFPNFKGSIYDQKG------------------------------EE 405 Query: 610 GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD-------------------- 649 +RN+T + + P+ T S + ++GIEP + D Sbjct: 406 PIRNATTTTIAPTGTISILCGTSSGIEPLFALAFTRNVLDNDKLVEVNPVFKEATEEAGC 465 Query: 650 ------------GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANT 697 G ++ + + + + ++ + +L++ QK D ++S Sbjct: 466 YSSELMEKVADKGSIQDIDEIPDSIKKVFVTSHDIS-PEWHLKMQAAFQKATDNAVSKTV 524 Query: 698 NYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDL 745 N + ++ + + A++ K T+Y +RD Sbjct: 525 NLP------NEADLKDVYEIYNLAHELNCKGVTVYRDGSRDTQVLQTSKA 568 >UniRef50_B5YGJ2 Ribonucleoside-diphosphate reductase n=12 Tax=cellular organisms RepID=B5YGJ2_THEYD Length = 584 Score = 540 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 133/660 (20%), Positives = 244/660 (36%), Gaps = 129/660 (19%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP--RETRLQYVKRFYD 198 M F+ A LE +YL++N GE E+ + L+ V++ + ++ ++ ++F++ Sbjct: 1 MIFTDRAKTVLEIRYLLKNE-KGEPIENPEQLFQRVSSYIAQAEKIYKKNSFEWEEKFHE 59 Query: 199 AVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINA 258 +S+ + +P + P Q ++C ++ DS++SI T + G G N Sbjct: 60 LISSLRFLPNSPALMNAGKPKAQLAACFVLPIEDSIESIFKTLKDAALILQSGGGTGFNF 119 Query: 259 GRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLV 318 +R G +R +G + F K F A QGG R GA + H ++ + Sbjct: 120 SSLRPKGDVVRSTGGVASGPVSFMKIFDKASDIIKQGGARRGANMGVLRVDHPDIFEFIR 179 Query: 319 LKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERL 378 +K + + + V + L K + L +P Sbjct: 180 IKRIES-----LSNFNISVAVTDSFMEALFKNDYFPLINPRT------------------ 216 Query: 379 YTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNL 438 ++VKA ++F +++ TG + +D N +P P I + +N Sbjct: 217 --------KEVVRKVKAKDIFDEIVESAWETGDPGVIFIDTINRSNP-TPHIGQIDSTNP 267 Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELAILAVRALDALL 493 C E L C L + NL + + LE A R LD + Sbjct: 268 CGEQPLLP------------YEACILGSLNLSKYVKEGKIDFERLEHDVKTATRFLDDAI 315 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 D YP+P ++ G R +G+G++ +A L + G Y+ A L + + I K Sbjct: 316 DVTHYPVPEVEKMHKGNRKIGLGIMGWADCLVELGIPYNHKKALALAEQVMQFISEKSHK 375 Query: 554 ASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 AS ELA+E+G P F + + K +P +RN Sbjct: 376 ASQELAQERGVFPNFKGSVWEKKGIP-------------------------------MRN 404 Query: 614 STLSALMPSETSSQISNATNGIEPPRGYVSIKASKD------------------------ 649 +T + + P+ T S I++ ++GIEP + D Sbjct: 405 ATTTTIAPTGTISIIADCSSGIEPYFLLAYKQRILDTEFEIINKYLIEIAQKQGFYSEDF 464 Query: 650 -------GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPS 702 G LR + + ++ E+ + ++Q+ QK+ D ++S N Sbjct: 465 INQLRQKGTLRGMKEVPLRIKRLFKTALEI-TPEEHIQMQASFQKYTDNAVSKTINL--- 520 Query: 703 RFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDGCESGACK 760 S + + + + + AYK G+K T++ ++ G L+ E K Sbjct: 521 ---SQRTRKEDVARIFILAYKKGLKGITIFRYGSKRG------TLLKISDAHLAECCEVK 571 >UniRef50_C1D7Z3 Ribonucleoside-diphosphate reductase n=5 Tax=Betaproteobacteria RepID=C1D7Z3_LARHH Length = 947 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 130/644 (20%), Positives = 235/644 (36%), Gaps = 97/644 (15%) Query: 145 YAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFK 204 + + L KY + + VAA L +R + + FY A+ Sbjct: 13 EISREVLLEKYAKGDEQN------VADVRRRVAAALAGQEQEPSR--HAESFYWAMEQG- 63 Query: 205 ISLPTPIMSGVRTPTR-QFSSCVLIECGDSLD-------SINATSSAIVKYVSQRAGIGI 256 I S T +C + GDS+ I + + + G+G Sbjct: 64 FIPGGRINSAAGTELSATLINCFVQPVGDSVSETRDGKVGIYEALLQAAETMRRGGGVGY 123 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 N RIR G+ ++G + +G + + + F + ++ G R GA H ++ES Sbjct: 124 NFTRIRPKGARVKGTNSRASGPVSYMRVFDRSCETVESAGARRGAQMGVLDCDHPDIESF 183 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 + K + +R+ + V ++ + L + D++EF Sbjct: 184 IHAK-----DAGDLRNFNISVGVSDAFMQAVEADGSWELVHKEE---------PDRKEFP 229 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 + D + V+A +L++ +M+ + + N + + + Sbjct: 230 DACQR--ADGKWVYRAVRARDLWNQIMESTYDHAEPGVLFMSKINRDNNL-SYCEVIEST 286 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAV 486 N C E LP + C L + NL + +++ +V Sbjct: 287 NPCGEQPLP------------DYGCCDLGSINLTRFVRDPFTAKAGFDFATFDKVVRQSV 334 Query: 487 RALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA 546 R LD +LD +P+P +R A +R +G+G L +YS + + EA Sbjct: 335 RMLDNVLDLTVWPLPEQQREAQSKRRIGLGFTGLGDALIMLTIKYSSDAGRAFAARVSEA 394 Query: 547 IQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESI 606 ++ AS +LA E+GA P F+ D Y + + P + ++ I Sbjct: 395 MRNSAYDASVDLAIEKGAFPLFDA----------DQYLAEPHCASRLP-----KEIKARI 439 Query: 607 KTHGLRNSTLSALMPSETSSQIS--NATNGIEPPRGYVSIKASKD--------------- 649 K HG+RNS L ++ P+ T S NA+NGIEPP + + + Sbjct: 440 KKHGIRNSHLLSIAPTGTISLAFADNASNGIEPPFSWFYTRKKRMADGTQQEYRVEDHAY 499 Query: 650 GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKV 709 + R++ D L D + EM D ++ +V + FID +IS N Sbjct: 500 RVYRELGGDVSSLPDYFVSALEMSALD-HMSMVAAVAPFIDTAISKTVNVP------ADY 552 Query: 710 PMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQD 751 P + A++ G+K T Y N+ G+ + + + D Sbjct: 553 PFADFESLYIEAWRAGLKGITTYRPNSVLGSVLSVEPTRETPAD 596 >UniRef50_C6P0N4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0N4_9PROT Length = 981 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 122/640 (19%), Positives = 228/640 (35%), Gaps = 94/640 (14%) Query: 145 YAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFK 204 + + L KY + +S Q + VA L E R ++ + F+ A Sbjct: 45 EISTEVLLEKYAEADE------KSVQDVRRRVARGLAQAETPEQRAKWEEAFFLAQENG- 97 Query: 205 ISLPTPIMSGVRTP-TRQFSSCVLIECGDSLDS-------INATSSAIVKYVSQRAGIGI 256 I S +C + GD++ I + + + G+G Sbjct: 98 FVPAGRINSAAGLKIQATLINCFVQPVGDAISGTNDGKPGIYDALQQAAETMRRGGGVGY 157 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 + IR G+ ++G + +G I + + F + ++ G R GA H ++E Sbjct: 158 DFSSIRPEGAHVKGTNSRASGPISYMRVFDRSCETVESAGARRGAQMGVLRCDHPDIEKF 217 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 + K + +R+ + V + + + K E+ L ++ A + E Sbjct: 218 ISAK-----DQGDLRNFNISVGVTDALMQAVEKDEEFELVHSAEPSTAIKEAGATRRE-- 270 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 D ++V+A +L+ ++ + +D N + + + Sbjct: 271 --------DGKWIYRKVRATDLWKQIIASTYDHAEPGVLFIDLMNRDNNL-SYCEIIEAT 321 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAV 486 N C E LP C L + +L + + + ++L +AV Sbjct: 322 NPCAEQPLPP------------YGCCCLGSIDLTRMVKNPFSKHAGFDYEPFKQLVRVAV 369 Query: 487 RALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA 546 R LD +LD +P+P ++ A +R +G+G L G RY +A Sbjct: 370 RMLDNVLDVTAWPLPEQQQEAKNKRRIGLGFTGLGDALVMMGLRYDTDAARAFASDITRI 429 Query: 547 IQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESI 606 ++ AS +LA E+G P + Y A + +++ I Sbjct: 430 MRDEAYLASVDLAVERGKFPLLDADKYLS---------------APRFASRLPDEIKDKI 474 Query: 607 KTHGLRNSTLSALMPSETSSQIS--NATNGIEPPRGYVSIKASK---------------D 649 + HG+RNS L ++ P+ T S NA+NGIEP + + + Sbjct: 475 RKHGIRNSHLLSIAPTGTISLAFADNASNGIEPAFSWFYTRKKRMMDGTTKDYPVEDHAW 534 Query: 650 GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKV 709 + +Q D HL ++ E+ D ++++V + +ID SIS N Sbjct: 535 RVFKQQGGDVSHLPPSFVTALEISAID-HMKMVAAVAPYIDTSISKTVNVP------ADY 587 Query: 710 PMQQLLKDLLTAYKFGVKTL--YYQNTRDGAEDAQDDLVP 747 P + A+K G+K L Y N+ G+ + Sbjct: 588 PYEDFKDLYTEAWKAGLKGLATYRPNSVLGSVLSVTTEKK 627 >UniRef50_Q1IXG5 Ribonucleoside-diphosphate reductase n=6 Tax=Bacteria RepID=Q1IXG5_DEIGD Length = 649 Score = 533 bits (1374), Expect = e-150, Method: Composition-based stats. Identities = 156/676 (23%), Positives = 256/676 (37%), Gaps = 52/676 (7%) Query: 109 MVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYES 168 MVE G +D +L Y EE K + R S+ ++ +Y + E Sbjct: 1 MVERGFWDGEMLARYRPEEVKAVFNRAYSHRFRFQSFMGAQKFYAEYATKTPDGSRYLER 60 Query: 169 AQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRT-PTRQFSSCVL 227 + +VA + D + TP + T + +SC L Sbjct: 61 YEDRMSMVALARAGG-----NAELALTLVDHLVRQTFVPATPTLMNSGKANTGRLTSCFL 115 Query: 228 I-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ 286 + +C DSLDSI T G+GI+ +RA G +R + G K F Sbjct: 116 LQDCTDSLDSIMKTQHFAADLSKNGGGVGIDLSNLRARGESLRHLQGVTKGAAAVAKLFD 175 Query: 287 TAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR 346 + Q G R GAA + + H + + LL K E R++ + I + Sbjct: 176 VLFRYADQAGQRQGAAVVNLNVMHPDFQELLAGKKIATDEDARLKTLSICAVIPDVFMQA 235 Query: 347 LLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQER 406 + +D+ P F D + ++ Y ++ +IRK+RV A +L + + Sbjct: 236 VRDDKDVYQVYPRSYEQATGRIFTDID-WDTEYASIVENPNIRKRRVSARQLLQEIALTQ 294 Query: 407 ASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDV------NDENGEIA 460 +G Y+ + N +P P + V+ +NLC EI PT P + DE G Sbjct: 295 GESGYPYLLFTGNANRANPV-PNVGTVKMTNLCSEIMQPTLPSSFHPYGEEARDEIGLDV 353 Query: 461 LCTLSAFNLGAINNLDELEELAILAVRALDALLD-YQDYPIPAAKRGAMGRRTLGIGVIN 519 C L++ ++G +L + A+ LD + +PA R R++G+G + Sbjct: 354 SCNLASLHIGNALKSGDLGGVVRAAISMLDDVAQSTNITEVPAVARANREMRSIGLGAMG 413 Query: 520 FAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNETTYAKGIL 578 +LA+HG Y A FEA+ ++ +AS ELA++ G F + Y G Sbjct: 414 LHGHLAEHGIAYGSPEALAFCDLFFEAVHFHARRASMELARDTGFVFAGFQGSRYQSGE- 472 Query: 579 PIDTYKKDLDTI--------------ANEPLHYDWEALRESIKTHGLRNSTLSALMPSET 624 Y + A P DW L I+ +GL +S + A+ P+ + Sbjct: 473 YFAPYTEREREPAQDLAPEVRAALQGAWLPTREDWRQLVSDIQRYGLAHSHVMAIAPTGS 532 Query: 625 SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEH-LHDAYELLWEMPGNDGYLQLVG 683 S ++NAT + P V + S G +P YE ++M + V Sbjct: 533 ISYVANATASVMPITERVETRTSGKGKTIYPMPGLNEQTEWFYEEAYDMDMRR-VIDTVA 591 Query: 684 IMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQD 743 +Q+ +DQ IS V L + ++AY+ G+K+LYY R Sbjct: 592 TIQRHVDQGISCTLFV------RSNVTTADLARLYISAYRKGLKSLYYLRQRRATV---- 641 Query: 744 DLVPSIQDDGCESGAC 759 C + A Sbjct: 642 --------QECVACAV 649 >UniRef50_A8LK99 Ribonucleoside-diphosphate reductase n=25 Tax=Bacteria RepID=A8LK99_DINSH Length = 765 Score = 533 bits (1373), Expect = e-150, Method: Composition-based stats. Identities = 125/640 (19%), Positives = 216/640 (33%), Gaps = 101/640 (15%) Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPT 209 + KY + I + + + +A L S + +FY A+ FK Sbjct: 12 IWDMKYRFKEADGTPIDVTVEDSWRRIARALASVESDP--AAWEPKFYAALEDFKFLPAG 69 Query: 210 PIMSGVRTPTR-QFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSP 267 I +G T +C ++ D + I + Q GIG + IR G+ Sbjct: 70 RITAGAGTERSVTLFNCFVMGTVPDDMGGIFEGLKEAALTMQQGGGIGYDFSTIRPKGAA 129 Query: 268 IRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEG 327 ++G A +G + F + ++ G R GA H ++E+ + K++ Sbjct: 130 VKGVAADASGPLSFMDVWDAMCRTIMSAGSRRGAMMATMRCDHPDIEAFIAAKSDPA--- 186 Query: 328 NRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS 387 R+R + V + + L D Sbjct: 187 -RLRMFNVSVLVTDAFMEAVKADGSWDLVF----------------------------DG 217 Query: 388 IRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTK 447 V+A +L++ +M+ + +D N + + +N C E LP Sbjct: 218 KVYHTVEARDLWNKIMKATFEYAEPGVIFIDRINAANNL-SYCETIAATNPCGEQPLPP- 275 Query: 448 PLNDVNDENGEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDALLDYQD 497 C L + NL + + LEEL AVR +D ++D Sbjct: 276 -----------YGACLLGSINLSRLISDPFGEGAALDEAALEELVATAVRMMDNVVDASR 324 Query: 498 YPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNE 557 +P+ A A +R +G+GV A L G RY +A T + I AS + Sbjct: 325 FPLEAQAAEARAKRRIGLGVTGLADALLMVGLRYGSEAAARQTERWLHRIARAAYLASVQ 384 Query: 558 LAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLS 617 LA E+GA P F Y + +R +I HG+RN+ L+ Sbjct: 385 LATEKGAFPLFEADAYLQSGTMQTM----------------DADVRAAIAEHGIRNALLT 428 Query: 618 ALMPSETSSQISN-ATNGIEPPRGYVSIKASKDGILRQVVPDY--------------EHL 662 ++ P+ T S + ++GIEP Y + + + L Sbjct: 429 SIAPTGTISLYAGNVSSGIEPVFAYSYTRKVLQKDGSRTEEEVVDYAVQLWREKFGDADL 488 Query: 663 HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAY 722 D + + D ++++ QK++D SIS N + + + A+ Sbjct: 489 PDHFVNAQTLAPLD-HVRMQAAAQKWVDSSISKTINCPE------DISFAEFKDVYMAAW 541 Query: 723 KFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDGCESGACK 760 G K T Y N G+ + + +D E G K Sbjct: 542 DQGCKGCTTYRPNAVTGSVLSVS--DSATKDSEAEKGEVK 579 >UniRef50_C5WF13 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C5WF13_STRDG Length = 728 Score = 533 bits (1373), Expect = e-150, Method: Composition-based stats. Identities = 152/694 (21%), Positives = 282/694 (40%), Gaps = 46/694 (6%) Query: 100 PALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQN 159 P+L + + +++ G Y+ + + Y ++ K+ + + + Y ++ Sbjct: 49 PSLEEKLAYLIKEGYYEQAIFDLYPDDVIKEAFQYAYQQDYRFLNLMGAMKFYQSYALKT 108 Query: 160 RVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRT-P 218 E+ + ++ A L + + + + TP Sbjct: 109 LDGKYYLETVEDRVVMNALFLANG-----DQTLLFNLIKDMLHRRFQPATPTFLNAGKKR 163 Query: 219 TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 ++ SC L+ D+++SI+ ++ + G+ + +R +G+PI+ E TG Sbjct: 164 RGEYISCYLLRIEDNMESISRAIGTSLQLSKRGGGVALCLTNLREIGAPIKEIENQATGI 223 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 +P K + + +Q G R GA ++ H EV + L K E R++ + G+ Sbjct: 224 VPVMKLLEDSFSYANQLGQRQGAGAVYLHAHHPEVLTFLDTKRENADEKIRIKSLALGLV 283 Query: 339 INKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVEL 398 I + + + +++ LFSP D+ +Y +D E Y K + +I+K + A +L Sbjct: 284 IPDITFQLAKENKEMALFSPYDIKRVYGKDMSDISITEE-YNKLLANPAIKKTYISARKL 342 Query: 399 FSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND---- 454 F L+ + +G Y+ D N +P + SNLC EIA + +D Sbjct: 343 FQLIAELHFESGYPYLLFDDTVNQRNPH-AQKGRIVMSNLCSEIAQVSTESTYNDDLSFK 401 Query: 455 ENGEIALCTLSAFNLG-AINNLDELEELAILAVRALDALLDYQDYPI-PAAKRGAMGRRT 512 + GE C L + N+ A+ + +L ++RALD + D P+ ++G Sbjct: 402 DIGEDICCNLGSINIAEAMTDAKHFSQLITTSIRALDQVSRASDLSCAPSIEKGNAANHA 461 Query: 513 LGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETT 572 +G+G +N +LA + Y A + T F + Y+ KAS +LAKE+GA F +T Sbjct: 462 VGLGAMNLHGFLATNHLYYDSEEAVDFTDLFFHTMAYHAFKASCQLAKEKGAFADFERST 521 Query: 573 YAKGILPIDTYKKDLDTIANE------------PLHYDWEALRESIKTHGLRNSTLSALM 620 YA G +D P DW+AL I+T+GL N+ L A+ Sbjct: 522 YADGSYFKQYVIEDAKPKTKRIAALLKSYGFQLPTVADWKALVRDIQTYGLANAHLLAVA 581 Query: 621 PSETSSQISNATNGIEPPRGYVSIKA-SKDGILRQVVPDYEHLHDAYEL--LWEMPGNDG 677 P+ + S +S+ T ++P V ++ G + + AY +EM G + Sbjct: 582 PTGSISYLSSCTPSLQPVVAPVEVRKEGNLGRIYVPAYQINQENYAYYERGAYEM-GPEP 640 Query: 678 YLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDG 737 +++V QK +DQ+IS + + + L + + A+K ++YY R Sbjct: 641 IIKIVAAAQKHVDQAISLTLFM------TDQATTRDLNRSYIQAFKLKCASIYYVRVRQE 694 Query: 738 AEDAQDDLVPSIQ----------DDGCESGACKI 761 + Q D E +C I Sbjct: 695 VLAGSEQYDEDSQLDSVDKNGLTDTINECQSCMI 728 >UniRef50_C3XAC6 Ribonucleoside-diphosphate reductase n=3 Tax=Betaproteobacteria RepID=C3XAC6_OXAFO Length = 963 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 128/636 (20%), Positives = 230/636 (36%), Gaps = 94/636 (14%) Query: 145 YAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFK 204 + + L KY N S + + VA L + + +Y + F A+ Sbjct: 23 EISTEVLLEKYAKGNET------SVEEVMERVAQALAEVEAPKNKKKYAEEFLWALQNG- 75 Query: 205 ISLPTPIMSGVRTP-TRQFSSCVLIECGDSL-------DSINATSSAIVKYVSQRAGIGI 256 + S T +C + GDS+ I + + + + G+G Sbjct: 76 FIPAGRVSSAAGTGLQTTLINCFVQPVGDSITNMVDGKPGIYTALAQAAETMRRGGGVGY 135 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 N IR G+ +RG + +G I + K F + ++ G R GA + H ++ Sbjct: 136 NFSSIRPRGAKVRGTGSSASGPISYMKVFDRSCETVESAGARRGAQMAVLNIDHPDIVEF 195 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 + +K E N++ + + V + + D L ++ E + Sbjct: 196 ITIKQ----EQNQLSNFNVSVGVTDKFMQAVESDGDFELAHVAEPN----------NELK 241 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 + D +VKA +++ L+M+ + + +D N + + + Sbjct: 242 EKGSYKRADGKWVYSKVKARDIWDLVMKSTYNAAEPGVLYIDRINRENNL-AYCEVIEAT 300 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAV 486 N C E LP + C L + NL + + + + +AV Sbjct: 301 NPCGEQPLP------------DYGCCCLGSLNLTSFVTAPFSAHPLFDFNLFARVTKIAV 348 Query: 487 RALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA 546 R LD +L +P+ + A +R +G+G L G RY A L+ + +A Sbjct: 349 RMLDNVLTATKWPLEEQAKEAAAKRRIGLGFTGLGDALIMLGIRYDSEEARILSSEISKA 408 Query: 547 IQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESI 606 ++ S +LAKE+GA P + Y KG E ++ I Sbjct: 409 MRDAAYSGSIDLAKERGAFPMLDVENYLKGGFVSRLP----------------EEMKAQI 452 Query: 607 KTHGLRNSTLSALMPSETSSQIS--NATNGIEPPRGYVSIKASKD--------------- 649 + HG+RNS L+++ P+ T S NA+NGIEP + + + Sbjct: 453 RKHGIRNSHLTSIAPTGTISLAFADNASNGIEPAFSWFYNRVKRMPDGSKKNYTVEDHAY 512 Query: 650 GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKV 709 I R + D L D + E+ D ++ +V + +ID +IS N + Sbjct: 513 RIYRSMGNDVSKLPDYFVSALEISAID-HMLMVAAVAPYIDAAISKTVNVAE------EY 565 Query: 710 PMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQD 743 P + + A+K G+K T Y N A + Sbjct: 566 PYEDFKNLYMEAWKKGLKGITTYRPNNVRTAILSVP 601 >UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=Mycobacterium RepID=A1KG47_MYCBP Length = 710 Score = 531 bits (1367), Expect = e-149, Method: Composition-based stats. Identities = 138/748 (18%), Positives = 239/748 (31%), Gaps = 159/748 (21%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQ---VELRSHIQFYDGIKTSD-IHET 61 V +RDG+ ++ +I + AA + V GI + I + Sbjct: 8 KVRRRDGTLVPFDIARIEAAVTRAAREVACDDPDMPGTVAKAVADALGRGIAPVEDIQDC 67 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLE 121 + ARL L +++ Sbjct: 68 VE------------------ARLGEAGL----------------------DDVARVYIIY 87 Query: 122 DYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF 181 E + + ++ S AAV L +YL+ + G ES L A C+ Sbjct: 88 RQRRAELRTAKALLGVRDELKLSLAAVTVLRERYLLHDE-QGRPAESTGELMDRSARCVA 146 Query: 182 SNY---PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSIN 238 + + ++ +RF + + +P + T + C ++ DSL SI Sbjct: 147 AAEDQYEPGSSRRWAERFATLLRNLEFLPNSPTLMNSGTDLGLLAGCFVLPIEDSLQSIF 206 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVR 298 AT + G G +R G + +G + F + + +A S GG R Sbjct: 207 ATLGQAAELQRAGGGTGYAFSHLRPAGDRVASTGGTASGPVSFLRLYDSAAGVVSMGGRR 266 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 GA + H ++ + K E + H + V + + + L +P Sbjct: 267 RGACMAVLDVSHPDICDFVTAKAESPSE---LPHFNLSVGVTDAFLRAVERNGLHRLVNP 323 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 R+ A ELF + + + G + +D Sbjct: 324 RT--------------------------GKIVARMPAAELFDAICKAAHAGGDPGLVFLD 357 Query: 419 HCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----N 473 N +P P + +N C E+ L C L + NL + Sbjct: 358 TINRANPV-PGRGRIEATNPCGEVPLLP------------YESCNLGSINLARMLADGRV 404 Query: 474 NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSD 533 + D LEE+A +AVR LD ++D YP P A R +G+GV+ A LA G Y Sbjct: 405 DWDRLEEVAGVAVRFLDDVIDVSRYPFPELGEAARATRKIGLGVMGLAELLAALGIPYDS 464 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANE 593 A L + IQ AS LA+E+GA P F ++ +A+ Sbjct: 465 EEAVRLATRLMRRIQQAAHTASRRLAEERGAFPAFTDSRFARSG---------------- 508 Query: 594 PLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS------ 647 RN+ ++++ P+ T S I+ T GIEP +A Sbjct: 509 ----------------PRRNAQVTSVAPTGTISLIAGTTAGIEPMFAIAFTRAIVGRHLL 552 Query: 648 -------------------------KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLV 682 + G +R + A+ E+ +L++ Sbjct: 553 EVNPCFDRLARDRGFYRDELIAEIAQRGGVRGYPRLPAEVRAAFPTAAEIA-PQWHLRMQ 611 Query: 683 GIMQKFIDQSISANTNYDPSRFPSGKVP 710 +Q+ ++ ++S N + P Sbjct: 612 AAVQRHVEAAVSKTVNLPATGRSMTSAP 639 >UniRef50_Q6R7H4 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Ostreid herpesvirus 1 RepID=RIR1_OSHV1 Length = 835 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 169/786 (21%), Positives = 315/786 (40%), Gaps = 111/786 (14%) Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDN----- 117 + A + PDY +LA R++ + + F + G Sbjct: 70 LDMAITPLIPSHPDYAFLAGRVSAYMTQINTPKTFTDAVYGIQMAVGETNGFRSPMKPVK 129 Query: 118 ----HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLY 173 + D+ E ++D ID RD + +Y + L ++ V ++YE Q+++ Sbjct: 130 GGLSDEIVDFVNEHGARLDGMIDDVRDYSHNYMGITGLLNGVAIK--VNKKLYERPQYVF 187 Query: 174 ILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDS 233 + VA + ++ ET L+ + + Y +S +S+ +P++ T + +SC L++ GD+ Sbjct: 188 MRVAMAM-TDLSSETALEDIWQTYMLISGQCLSMASPVLFNGGTSSSNTASCFLLDMGDN 246 Query: 234 LDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCS 293 + SI + + +++ GIGIN ++RA GS I G +G F +S Sbjct: 247 MVSITKKVAQTMTLIAKNGGIGINFSKLRATGSKI-GMAGKSSGIGGKLNLFDRVAQSVD 305 Query: 294 QG-GVRGGAATLFYPMWHLEVESLLVLK-NNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 QG R GA + WH ++ L + + G E N+ ++ G+ ++ L R+ + Sbjct: 306 QGENKRPGAIAGYLTDWHADMYDWLYSRYSGSGNEVNKRHVLNMGLVMSDLFMERVENDK 365 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR 411 + +LFSP+DV GL + + E+F R Y +E + I++ V A +LFS + STG Sbjct: 366 EWSLFSPNDVVGLEELY---GEKFVRAYRAHEANPKIKRTTVSARKLFSDIANMMWSTGE 422 Query: 412 IYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGA 471 YI D N S + ++ SNLC EI + EIA+C L+ + Sbjct: 423 PYILFKDAVNERSNHK-HLGTIKNSNLCCEIVQYC--------DTNEIAVCNLATICVSN 473 Query: 472 IN-------NLDELEELAILAVRALDALLDYQDYPI-------------PAAKR------ 505 + + + + A +A + ++ L+D Q+Y + Sbjct: 474 FVNVETGEIDFEGIADAAGVACKGINNLIDKQNYDLGNEQLMRLADERTEEVVEVNGIKF 533 Query: 506 ---------GAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASN 556 + R GIG+ K Y A L EAI Y ++ S Sbjct: 534 DAKYNLVSYSNLKHRPQGIGMQGLHDVFMKLKIPYDSEMAFRLAALIQEAIYYGAVRESV 593 Query: 557 ELAKEQGACPWF--NETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNS 614 ++A+E+G P + + T+ +G L D + ++W + + + G+ NS Sbjct: 594 KIAEEKGPYPSYYWDNNTHREGKLQFDFLEGFDRDRDLTHELFNWREVLKKFEKFGINNS 653 Query: 615 TLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV------------------ 656 ++A PS +SSQ+++ IE K KDG + Sbjct: 654 VVTAQPPSASSSQLNDNVESIEAITSNRFTKGIKDGKFIIINKHLQKDLEDLGMWDAQMV 713 Query: 657 --------------PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPS 702 +++ + Y+ E+ +++ +Q FIDQ+IS N Sbjct: 714 GDIEANDGSIQNIERIPKNIREIYKTAREIDH-KAVVKICAAIQPFIDQTISKNMFVP-- 770 Query: 703 RFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAE---------DAQDDLVPSIQDD 752 + P+Q ++++++ +K +KT +YY + +D P + Sbjct: 771 --KNVDNPVQLIMENVILGHKMKLKTGMYYTRGIPAMKQQNFGKMNFQDKDIGKPVPELV 828 Query: 753 GCESGA 758 CE+ + Sbjct: 829 DCEACS 834 >UniRef50_P26685 Ribonucleoside-diphosphate reductase large subunit n=7 Tax=African swine fever virus RepID=RIR1_ASFM2 Length = 779 Score = 526 bits (1356), Expect = e-148, Method: Composition-based stats. Identities = 183/806 (22%), Positives = 297/806 (36%), Gaps = 98/806 (12%) Query: 22 IHRVLDWAAEGLH-NVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYL 80 I + L A G NV ++++ + G +I + L DY L Sbjct: 6 IVKKLASATYGKALNVDLNKLLQALNHHSLQG---------LISYCSALT-ILHYDYSTL 55 Query: 81 AARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRD 140 AARL+++ L + F + + ++ Y D++ID+ RD Sbjct: 56 AARLSVYLLHQSTASSFSKAVSLQAAQSCSRLSSHFVDVVYKYK----AIFDSYIDYSRD 111 Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAV 200 S ++ ++ YL++N+ G I E Q Y+ VA + R ++ + YD + Sbjct: 112 YKLSLLGIETMKNSYLLKNKD-GVIMERPQDAYMRVAIMIHG-MGRVVNMKMILLTYDLL 169 Query: 201 STFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGR 260 S I+ +P M T Q SSC L+ D+L+++ GIG+ Sbjct: 170 SRHVITHASPTMFNAGTKKPQLSSCFLLNVNDNLENLYDMVKTAGIISGGGGGIGLCLSG 229 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLV-- 318 IRA S I G G + + +QGG+R GA ++ +WH ++ + L Sbjct: 230 IRAKNSFISGSGLRSNGIQNYIVLQNASQCYANQGGLRPGAYAVYLELWHQDIFTFLQMP 289 Query: 319 -LKNNRGVEGNRVRHMDYGVQINKLMYTRLLK------GEDITLFSPSDVPGLYDAFF-- 369 LK + ++ YG+ + L L LFSP P L+ F Sbjct: 290 RLKGQMAEQRLNAPNLKYGLWVPDLFMEILEDQIHNRGDGTWYLFSPDQAPNLHKVFDLE 349 Query: 370 -----ADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS 424 EF++LY +Y + A E+ + G YI D N S Sbjct: 350 RSQHENAHREFKKLYYQYVAEKRYTGVT-TAKEIIKEWFKTVVQVGNPYIGFKDAINRKS 408 Query: 425 PFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELE 479 + + SNLC+EI +P E +C L+A NL A + L Sbjct: 409 NL-SHVGTITNSNLCIEITIPCWEG-----NEAEQGVCNLAAVNLAAFIRESSYDYRGLI 462 Query: 480 ELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNL 539 E A LD ++D YP A +R M R +GIGV A A ++ A + Sbjct: 463 EAAGNVTENLDNIIDNGYYPTEATRRSNMRHRPIGIGVFGLADVFASLKMKFGSPEAIAI 522 Query: 540 THKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH--- 596 A+ Y ++ S ELAKE+G+ P F + +KG+L D + + D I + Sbjct: 523 DEAIHAALYYGAMRRSIELAKEKGSHPSFPGSAASKGLLQPDLWVRCGDLIPSWENRVAQ 582 Query: 597 --------YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK 648 W LR + G+RN L+ALMP+ TSS + EP + + + Sbjct: 583 TTQGVLTPKKWWQLRLAAIQ-GVRNGYLTALMPTATSSNSTGKNECFEPFTSNLYTRRTL 641 Query: 649 DGILRQVVPD--------------------------------YEHLHDAYELLWEMPGND 676 G + + + Y+ EM Sbjct: 642 SGEFIILNKYLMDDLEEINLWSEDIQQQLLNAGGSIQHILDIPAEIRERYKTSREM-NQK 700 Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL-YYQNTR 735 + F+ QS+S N + + Q+L L+ +K G+ T YY + Sbjct: 701 ILTKHAAARNPFVSQSMSLNYYFYEPE-------LSQVLTVLVLGWKKGLTTGSYYCHFS 753 Query: 736 DGAEDAQDDLVPSIQDDGCESGACKI 761 GA + + S + + AC + Sbjct: 754 PGAGTQKKIIRNSEKACNADCEACLL 779 >UniRef50_B1XZE5 Ribonucleoside-diphosphate reductase n=11 Tax=Betaproteobacteria RepID=B1XZE5_LEPCP Length = 1007 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 134/652 (20%), Positives = 237/652 (36%), Gaps = 94/652 (14%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKIS 206 + + L KY + S + + VAA L S E R + +RF A Sbjct: 37 SAEVLIEKYAKGDES------SIEQVRRRVAAALASVEAPEARELWTERFLAAQERG-FV 89 Query: 207 LPTPIMSGVRTPTR-QFSSCVLIECGDSLD-------SINATSSAIVKYVSQRAGIGINA 258 I S T +C + GDS+ I + + + + G+G + Sbjct: 90 PAGRIASAAGTTLSATLINCFVQPVGDSIAEPEEGFPGIYTALTEAAETMRRGGGVGYDF 149 Query: 259 GRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLV 318 RIR G+ + ++ +G + + + F + ++ G R GA H +VE+ + Sbjct: 150 SRIRPYGAWVGSTQSHASGPVSYMRVFDRSCETVESAGSRRGAQMGVLRCDHPDVEAFIH 209 Query: 319 LKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERL 378 K + +++ + V + + + D+ L ++ E+ + Sbjct: 210 AK-----DKGDLKNFNISVGVTDVFMKAVEADTDVDLVHKAEP----------GEKQKAA 254 Query: 379 YTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNL 438 + D + V+A +L+ +M+ + +D N + + +N Sbjct: 255 GARQRADGLWVYRSVRARDLWDQIMRSTYDHAEPGVLFLDRINQDNNL-SYCETIAATNP 313 Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVRA 488 C E LP C L + +L + E+ A R Sbjct: 314 CAEQPLPP------------YGCCCLGSVDLTHFVQRPFESDASFDDAAFAEVCATATRM 361 Query: 489 LDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQ 548 LD +LD +P+PA ++ A +R +G+G L G RY +A + E ++ Sbjct: 362 LDNVLDATVWPLPAQQQEAANKRRVGLGFTGLGDALIMLGLRYDTPAARAMATHISEVMR 421 Query: 549 YYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKT 608 AS++LA+E+GA P FN Y G N A++E I+ Sbjct: 422 DAAYIASSDLAQERGAFPLFNADLYLSG---------------NSFASRLPAAVKEHIRV 466 Query: 609 HGLRNSTLSALMPSETSSQIS--NATNGIEPPRGYVSIKASK---------------DGI 651 +GLRNS L ++ P+ T S NA+NGIEPP + + + + Sbjct: 467 NGLRNSHLLSIAPTGTISLAFADNASNGIEPPFSWTYTRKKREADGTFKEFAVEDHAWRL 526 Query: 652 LRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPM 711 R + L DA+ EM + + +V + ID SIS N P Sbjct: 527 YRHLKGADAPLTDAFVTALEMSA-EAHESMVAAVAPCIDTSISKTVNVP------ADYPY 579 Query: 712 QQLLKDLLTAYKFGVKTL--YYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 + + A+K G+K L Y N+ G+ + VP + + + Sbjct: 580 EDFQGLYMAAWKSGLKGLATYRPNSVLGSVLSVTPTVPVVAETAATPQPLTV 631 >UniRef50_P78027 Ribonucleoside-diphosphate reductase subunit alpha n=50 Tax=Bacteria RepID=RIR1_MYCPN Length = 721 Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 151/684 (22%), Positives = 276/684 (40%), Gaps = 45/684 (6%) Query: 100 PALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQN 159 + + + +V+ YD +++ Y+ E+F+++ R ++ + Y ++ Sbjct: 55 HSTKERLDFLVKNDYYDENIINMYSFEQFEEITRKAYAYRFRYANFMGAFKFYNAYALKT 114 Query: 160 RVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP- 218 E+ + ++ L + + + + T + TP Sbjct: 115 FDGKWYLENYEDRVVMNVLFLANGNYNK-----ALKLLKQIITNRFQPATPTFLNAGRKK 169 Query: 219 TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 +F SC L+ D+++SI + ++ + G+ + IR G+PI+ E +G Sbjct: 170 RGEFVSCYLLRIEDNMESIGRAITTTLQLSKRDGGVALLLTNIRESGAPIKKIENQSSGI 229 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 IP K + + +Q G R GA ++ H +V L K E R++ + G+ Sbjct: 230 IPIMKLLEDSFSYANQLGQRQGAGAVYLHAHHPDVMQFLDTKRENADEKIRIKSLSLGLV 289 Query: 339 INKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVEL 398 I + +T E++ LFSP DV Y +D E Y + I+K + A + Sbjct: 290 IPDITFTLAKNNEEMALFSPYDVYEEYGKPLSDISVTEMYYELL-ANQRIKKTFINARKF 348 Query: 399 FSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND---- 454 F + + +G YI D N + + SNLC EI P+ P +D Sbjct: 349 FQTVAELHFESGYPYILFDDTVNRRN---AHPNRIVMSNLCSEIVQPSTPSEFHHDLAFK 405 Query: 455 ENGEIALCTLSAFNLGA-INNLDELEELAILAVRALDALLDYQDYPI-PAAKRGAMGRRT 512 + G C L + N+ + + E EL LA+ +LD + + P+ ++G Sbjct: 406 KVGNDISCNLGSLNIAKAMESGPEFSELVKLAIESLDLVSRVSNLETAPSIQKGNSENHA 465 Query: 513 LGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETT 572 LG+G +N +LA + Y+ A + T+ F + Y+ KAS+ELA E+G F T Sbjct: 466 LGLGAMNLHGFLATNQIYYNSPEAIDFTNIFFYTVAYHAFKASSELALEKGKFKNFENTK 525 Query: 573 YAKGILPIDTYKKDLDTI----------------ANEPLHYDWEALRESIKTHGLRNSTL 616 +A G D Y K P +W+ L +I+ +GL NS L Sbjct: 526 FADGS-YFDKYIKVEPDFWTPKTERVKALFQKYQVEIPTRENWKELALNIQKNGLANSHL 584 Query: 617 SALMPSETSSQISNATNGIEPPRGYVSIKA-SKDGILRQVVPDYEHLHDAYEL--LWEMP 673 A+ P+ + S +S+ T ++P V ++ + G + + +E+ Sbjct: 585 LAIAPTGSISYLSSCTPSLQPVVSPVEVRKEGRLGRIYVPAYQLNKDSYPFYKDGAYEL- 643 Query: 674 GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQN 733 G + + + Q+ +DQ+IS + K + L K + A+K G ++YY Sbjct: 644 GPEPIINIAAAAQQHVDQAISLTLFM------TDKATTRDLNKAYIYAFKKGCSSIYYVR 697 Query: 734 TRDGAEDAQDDLVPSIQDDGCESG 757 R +D +IQ CE+ Sbjct: 698 VRQEVL--EDSEDHTIQMQQCEAC 719 >UniRef50_P50620 Ribonucleoside-diphosphate reductase subunit alpha n=170 Tax=root RepID=RIR1_BACSU Length = 700 Score = 521 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 138/661 (20%), Positives = 269/661 (40%), Gaps = 34/661 (5%) Query: 100 PALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQN 159 L + + +VE Y+ L Y+ E+ K++ + S+ + + Y ++ Sbjct: 49 HNLKEKLDYLVENQYYEEEFLSLYSFEDIKEVFKTAYAKKFRFPSFMSAFKFYNDYALKT 108 Query: 160 RVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRT-P 218 +I E + +VA + + K + + + + TP Sbjct: 109 NDKKKILERYEDRISIVALFFANGDTEK-----AKEYVNLMINQEYQPSTPTFLNAGRKR 163 Query: 219 TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 + SC L+E DSL+ I+ ++ G+ +N ++RA G I+ E G Sbjct: 164 RGELVSCFLLEVNDSLNDISRAIDISMQLSKLGGGVSLNLSKLRAKGEAIKDVENATKGV 223 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 + K A + Q G R G+ + ++H ++ L K E RV+ + GV Sbjct: 224 VGVMKLLDNAFRYADQMGQRQGSGAAYLNIFHRDINDFLDTKKISADEDVRVKTLSIGVV 283 Query: 339 INKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVEL 398 I + + +F P + Y D+ + +Y K+ + ++K+++ +L Sbjct: 284 IPDKFVELAREDKAAYVFYPHTIYKEYGQHM-DEMDMNEMYDKFVDNPRVKKEKINPRKL 342 Query: 399 FSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALP----TKPLNDVND 454 + R+ +G YI D+ N + I+ V+ SNLC E+ + D D Sbjct: 343 LEKLAMLRSESGYPYIMFQDNVNKVHA-NNHISKVKFSNLCSEVLQASQVSSYTDYDEED 401 Query: 455 ENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDY-PIPAAKRGAMGRRTL 513 E G C L + N+ + +E+ LA +L + + D PA +R +++ Sbjct: 402 EIGLDISCNLGSLNILNVMEHKSIEKTVKLATDSLTHVSETTDIRNAPAVRRANKAMKSI 461 Query: 514 GIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNETT 572 G+G +N YLA++G Y A + + F + +Y ++ S E+AKE+G + +T Sbjct: 462 GLGAMNLHGYLAQNGIAYESPEARDFANTFFMMVNFYSIQRSAEIAKEKGETFDQYEGST 521 Query: 573 YAKGILPIDTYKKDLDTI-----------ANEPLHYDWEALRESIKTHGLRNSTLSALMP 621 YA G D Y + + P DW+ L+ + HG+ +S + P Sbjct: 522 YATGE-YFDKYVSTDFSPKYEKIANLFEGMHIPTTEDWKKLKAFVAEHGMYHSYRLCIAP 580 Query: 622 SETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHD-AYELLWEMPGNDGYLQ 680 + + S + ++T + P + + + +P + Y+ ++M + Sbjct: 581 TGSISYVQSSTASVMPIMERIEERTYGNSKTYYPMPGLASNNWFFYKEAYDMDMFK-VVD 639 Query: 681 LVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED 740 ++ +Q+ IDQ IS + + + L + L A+ G+KT+YY T+D +D Sbjct: 640 MIATIQQHIDQGISFTLFLKDT------MTTRDLNRIDLYAHHRGIKTIYYARTKDTGQD 693 Query: 741 A 741 + Sbjct: 694 S 694 >UniRef50_A7I485 Ribonucleoside-diphosphate reductase n=6 Tax=Methanomicrobia RepID=A7I485_METB6 Length = 741 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 112/648 (17%), Positives = 213/648 (32%), Gaps = 146/648 (22%) Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPT 209 L +YL + + VA+ L + R FY+A+ + + + Sbjct: 10 ILSARYLRKGEKD------FTDICRRVASALADDENERAR------FYEAMISLRFLPNS 57 Query: 210 PIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIR 269 P + T Q S+C + D++D I G G N IR GSP++ Sbjct: 58 PTLMNAGTEIGQLSACFTLPVPDTIDGIFDAMKEGAIIHKTGGGTGYNFSHIRPEGSPVQ 117 Query: 270 GGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNR 329 + +G I F + F A QGG R GA +WH ++ + + K G Sbjct: 118 STDGVASGPISFMRVFNAATDVIKQGGRRRGANMGILNVWHPDILAFISAKKKEGE---- 173 Query: 330 VRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIR 389 + + V +N + + FE ++ Sbjct: 174 FSNFNISVMVNDKFMDLV-----------------------AAKSFETVWLTKGGTG--- 207 Query: 390 KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPL 449 +++ ++++ +++ G I D N H+P P + + +N C E L Sbjct: 208 -EKITVGQIWNGIVEGIWKNGEPGILFYDEINRHNP-TPQLGEIDTTNPCGEQPLLP--- 262 Query: 450 NDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALDALLDYQDYPIPAAK 504 C L + NL A + D L + + +A R LD +++ +PIP Sbjct: 263 ---------YESCVLGSINLAACVREGAFDEDLLRDTSRMATRFLDLVIEKNVFPIPQIA 313 Query: 505 RGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA 564 R +G+GV+ + G Y + I ++ S+ LA++ G Sbjct: 314 EATRKTRKIGLGVMGVHDAMLMLGLSYDSEKGRAWCEWVMKVITETAIEESHRLAEKLGT 373 Query: 565 CPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET 624 P + + + K + +RN+ ++ + P+ T Sbjct: 374 FPAWQGSIW---------------------------------KDYEVRNAAMTTVAPTGT 400 Query: 625 SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY------------------------- 659 S ++ ++GIEP + + + G + +V Sbjct: 401 ISLLAGCSSGIEPIFSFAYTRKNTVGKVFVIVNPVFKEALLHTLTGMGYAGDEREKKAGE 460 Query: 660 ------------------EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDP 701 ++ ++P + ++ + QK++ SIS N Sbjct: 461 VISHVHETGSMQDVAWLSAEFRGLFKTALDIPWRE-HILMQACFQKYVHASISKTINMP- 518 Query: 702 SRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVP 747 G + LL A+K G+K T+Y +R+ A + Sbjct: 519 -----GSATKDDCAEALLMAWKLGLKGITIYRTGSREDVVLALKEKEK 561 >UniRef50_UPI0001792B32 PREDICTED: similar to AGAP010198-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792B32 Length = 766 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 161/784 (20%), Positives = 315/784 (40%), Gaps = 93/784 (11%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQ-FYDGIKTSDIH 59 + ++L V KRDG+ E+++ D+I + GL + + + + + GI TS + Sbjct: 4 LKKHLYVQKRDGTIEKVHYDEIIARIKQLCYGLEKIDPAATAIHVIKKCLFAGITTSQLD 63 Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHL 119 + + A + + PDY+ LAAR+AI +L K+ +F H + + Sbjct: 64 DAAAEMAITMATI-HPDYEKLAARIAISNLHKQTKEKFSDVIDDIHKNDDYWNTGLSDDI 122 Query: 120 LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 + + +++ I+++ D Y K L +LV++ + E Q L++ VA Sbjct: 123 -YEIIMKNKDRLNEAINYENDYILDYFGFKYLTQNFLVKSE--NQTIERPQHLFMKVAVG 179 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE-----CGDSL 234 + + Y +S K+ + +P++ ++ R+ + V+ DS+ Sbjct: 180 IHG-----DDIDSAIETYKMLS-QKLCMFSPVVMQLQPAARKLNVSVISHYSVAMIADSI 233 Query: 235 DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQ 294 D I T + + ++ + + ++ +IRA G+ I+G +G K + + V C + Sbjct: 234 DGIYDTLNRLSTFILPYSSVAVHVHKIRAAGTYIKGSNGKSSGLPLMLKQYDSMV-HCKE 292 Query: 295 GGVRGGA---ATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 R + ++ +WH ++ ++ + ++++ + I R+ + Sbjct: 293 TLERPKSIKGVAIYCELWHADIMKIIDQIRKTTIADIKLKNSQLALWIPDEFMRRVENDQ 352 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYE-KDDSIRKQRVKAVELFSLMMQERASTG 410 + SP PGL D EEF+ LY +YE K S ++++A +L+S ++Q + TG Sbjct: 353 MWSFMSPDHCPGLIDV---HGEEFDNLYKEYELKSKSFVMRQIEAKKLWSQIIQSQIETG 409 Query: 411 RIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG 470 + D CN S + + ++ + + T + E+A CT ++ ++ Sbjct: 410 LPLLLFKDACNAKSN-ESHLGTIQCAGRNGDTVQFT--------ASDEVATCTTASISVD 460 Query: 471 AI------NNLDELEELAILAVRALDALLDYQDYPI---PAAKRGAMGRR-TLGIGVINF 520 + +L+E A L+ +++ + + K G + +GIG+ Sbjct: 461 MFLTSENIFDFSKLKETAKKITYDLNKIIENNNVILNKEDQLKLGLKQNQLAIGIGIQGL 520 Query: 521 AYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPI 580 A K + + A L + E I Y L+AS ELA + G + + +KG+L Sbjct: 521 ADLFIKMRYPFDNKEARYLNIQIHETIYYGALEASCELASKNGPYKTYPNSPTSKGLLQF 580 Query: 581 DTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRG 640 D + + +DW +L+ I HGLRNS ++ +E S I N IEP Sbjct: 581 DLWNVKPSNL------WDWNSLKTKIAQHGLRNSLVTVTSNTEVESTIFGNVNSIEPLDT 634 Query: 641 YVSIK-----ASKDGILRQVVPD-------------------------------YEHLHD 664 V + SK ++ V P + L Sbjct: 635 NVKRRYISLGESKPKEIQVVNPYLLKDLHDRKLWDEKLIPELVNNMGSIQEINLPDDLKQ 694 Query: 665 AYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKF 724 Y WE+ + + FIDQS + + N K + + ++ +K Sbjct: 695 LYRTKWEID-QKVLVTMAADRAPFIDQSQAFSLNM-------VKANEDIISEMHISTWKM 746 Query: 725 GVKT 728 G+KT Sbjct: 747 GLKT 750 >UniRef50_Q2T3W9 Ribonucleotide reductase system n=37 Tax=Burkholderiales RepID=Q2T3W9_BURTA Length = 881 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 125/650 (19%), Positives = 220/650 (33%), Gaps = 97/650 (14%) Query: 146 AAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKI 205 ++ L KY + +A +Y VA + P E R + RF + + + Sbjct: 53 FSIDVLLEKYAKGDER------TADDIYRRVARGVAQAEPPELRDEIEARFVEHLQRGAL 106 Query: 206 SLPTPIMSGVRTP-TRQFSSCVLIECGDSLDS--------INATSSAIVKYVSQRAGIGI 256 IMS + +C + GD + I + + + G+G Sbjct: 107 G-AGRIMSAAGSSIAATLINCFVQPVGDCIQGVDERGLPGIYVALLQAAETMRRGGGVGY 165 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 N IR G+ + + +G + F + ++ G R GA H ++ Sbjct: 166 NFSAIRPRGAYVHSTGSSASGPCSYIDVFDASCRTVESAGARRGAQMAVLDCDHPDLLEF 225 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 + K+++G R + + V + + + L ++ A Sbjct: 226 IEAKHSKG----RWNNFNISVAVTDAFMNAVEQDLPWQLVHRAEPSPALRAAGD------ 275 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 D +A ++ +M+ + + N + I +R + Sbjct: 276 ---LHRRDDGMWVYAERRARAIWDKIMRSTYDVAEPGVVFISKMNDDNNLRA-IESIRAT 331 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI--------------NNLDELEELA 482 N C E LP C L NL + D L E Sbjct: 332 NPCGEQPLPA------------YGCCNLGPLNLTRFVIDPFARLDGGESVFDWDALAERT 379 Query: 483 ILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHK 542 VR LD +LD +P+P + A +R +GIG L G RY + + Sbjct: 380 RTQVRFLDDVLDVTLWPLPEQRHEAQQKRRIGIGFTGLGDTLVMLGLRYDAQEGRDFAAR 439 Query: 543 TFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEAL 602 ++ +AS ELA E+GA P F+ + Y + + + Sbjct: 440 VAREMRDAAYRASVELACERGAFPLFDASRYLE---------------EGTFASRLPDDI 484 Query: 603 RESIKTHGLRNSTLSALMPSETSSQIS--NATNGIEPPRGYVSIKA-------------- 646 RE+I+ G+RNS L ++ P+ T S NA+NGIEP + + Sbjct: 485 REAIRRDGIRNSHLLSIAPTGTVSLAFADNASNGIEPAFSWTYQRTKIMADGSRQTFAVE 544 Query: 647 -SKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 + R++ D + L + +M +D +L ++ +Q +ID SIS N Sbjct: 545 DYAYRLYRELGGDVDALPGYFVSALQMSAHD-HLAMMAAVQPYIDTSISKTVNVP----- 598 Query: 706 SGKVPMQQLLKDLLTAYKFGVKTL--YYQNTRDGAEDAQDDLVPSIQDDG 753 P A+K G+K L Y N GA + ++++ Sbjct: 599 -ADYPFDDFESLYFDAWKSGLKGLATYRPNETLGAVLHTSEPDDTLEEAD 647 >UniRef50_Q66LW9 Ribonucleoside-diphosphate reductase 1 alpha chain n=4 Tax=Siphoviridae RepID=Q66LW9_BPT5 Length = 811 Score = 514 bits (1324), Expect = e-144, Method: Composition-based stats. Identities = 280/787 (35%), Positives = 427/787 (54%), Gaps = 47/787 (5%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVS--ISQVELRSHIQFYDGIKTSD-I 58 ++ V KRDG+ E +K++ WA G V S + + + G+ SD + Sbjct: 38 HRIEKVIKRDGTVEDFAPEKLNG---WAEYGCKTVDVSWSAITMAAQKTLPKGVVDSDTL 94 Query: 59 HETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNH 118 + +IKAA LI +D P Y A L + +RK+ Y FEPP+L MV +G +++ Sbjct: 95 MDALIKAAESLI-KDNPAYDVPAKELRLAQMRKRLYDSFEPPSLRFFHDHMVSVGAWED- 152 Query: 119 LLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 + T+E+F+ ++ IDHDRD F+ +KQ KY +N TGEIYE+ QF Y+ +A Sbjct: 153 MSAWITDEQFEALNQVIDHDRDRLFTSGGLKQFFDKYSRRNIATGEIYETPQFAYMGMAM 212 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSIN 238 + S + Y+A+S KI++PTP + G+R+ R F+SC L++ D+LDSI+ Sbjct: 213 AMLS--QPNWTILDAIDLYNAMSLHKINVPTPPLVGLRSSDRGFASCCLVDSTDTLDSID 270 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVR 298 + K V+ RAGIG + R++ P+R G H+G +P+Y+H +VK+ +Q R Sbjct: 271 TAEHIVFKMVAARAGIGYHLES-RSIADPVRNGAFPHSGKLPYYRHIDRSVKANTQQ-TR 328 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 GG+AT+ YP + E+ L+ +K R + N++ MDY + N L+ R LK EDITL S Sbjct: 329 GGSATVSYPYFDPEIIQLMQVKQQRATDENKIDKMDYSLSFNNLLLKRYLKNEDITLMSY 388 Query: 359 SDVPGLYDAFFADQE-EFERLYTKYEK----------DDSIRKQ--RVKAVELFSLMMQE 405 P +++AF++D E +FE +Y EK + +V A E+ ++ Sbjct: 389 FYAPEVHEAFYSDDEAKFEEIYVAAEKRVASLTKIDHEGKTVPTAPKVSAKEILDTWLRI 448 Query: 406 RASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND----------- 454 R TGR+Y ++ N H F P+R +NLC+EI PT+P + + + Sbjct: 449 RMETGRMYAHHIGESNRHGNFLD---PIRMTNLCVEITQPTRPFHHITELYKTKEQLDQM 505 Query: 455 ---ENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRR 511 + GE++LC L LG + +L E E+ + ++ +D +++ QDYP P + A RR Sbjct: 506 KPEDIGEVSLCNLGGVVLGRMESLAEWEKTCYILLKFVDTIIEIQDYPFPTMEYTAKKRR 565 Query: 512 TLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNET 571 +GIG++N A +A G Y A N H+ E + Y+L KAS LAKEQGAC WFN T Sbjct: 566 NVGIGLMNAAGAMAAEGLAYEGIEARNWIHREAEKLSYFLHKASVRLAKEQGACEWFNRT 625 Query: 572 TYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA 631 +KGIL IDTYKK +D + + L DWE+LR I +G+RNS L+A MP E+SS + Sbjct: 626 KPSKGILVIDTYKKTVDELVSVGLEMDWESLRADILKYGMRNSVLTAQMPGESSSVLLGV 685 Query: 632 TNGIEPPRGYVSIKASKDGILRQVVP---DYEHLHDAYELLWEMPGNDGYLQLVGIMQKF 688 TN IEPPR VSIK S + + P D+E L +Y+L +++ + ++ V MQKF Sbjct: 686 TNSIEPPRKIVSIKGSAVNKVIAIAPGATDWETLM-SYKLAYDVDRIEW-IKWVATMQKF 743 Query: 689 IDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPS 748 QSIS N YD ++F + +P +++D +TA K+G KT YY N + Sbjct: 744 FSQSISTNMYYDYTKFENEIIPGPVVVRDFMTAVKYGWKTWYYANFNTANGGGAGEEAAG 803 Query: 749 IQDDGCE 755 GC+ Sbjct: 804 CASGGCQ 810 >UniRef50_C6QBB0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyphomicrobiaceae RepID=C6QBB0_9RHIZ Length = 809 Score = 514 bits (1324), Expect = e-144, Method: Composition-based stats. Identities = 122/644 (18%), Positives = 222/644 (34%), Gaps = 100/644 (15%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQ--YVKRFYDA 199 + KY + ++ + + VA S R Q + FY+A Sbjct: 7 DLPAISNAIWRRKYRFGGSPSVAADQTLEDTFRRVALAAASAEKGGKRQQQKWAGTFYEA 66 Query: 200 VSTFKISLPTPIMSGVRTPTR-QFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGIN 257 ++ F I++G T +C ++ E D L SI + + GIG + Sbjct: 67 MADFGFQPAGRILAGAGTDRNVTLFNCFVLGEIADDLSSIFESVKEAALTMQSGGGIGHD 126 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 +R G+P++ A +G + F + ++ G R GA H ++E+ + Sbjct: 127 FSTLRPRGAPVKSIGADASGPVSFMDVWDAMCRTIMSAGQRRGAMMATLRCDHPDIEAFI 186 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFER 377 K + R+R+ + V + + + L Sbjct: 187 AAK----ADSQRLRNFNLSVLVTDAFMDAVRRDAPWDLIF-------------------- 222 Query: 378 LYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSN 437 + + A L+ +M+ + +D N + + +N Sbjct: 223 --------SGKVYKTIPARALWDQIMRATFDYAEPGVIFIDRINAANNLQ-YCETISATN 273 Query: 438 LCLEIALPTKPLNDVNDENGEIALCTLSAFNLGA----------INNLDELEELAILAVR 487 C E LP C L + NL ++ +LE AVR Sbjct: 274 PCGEQPLPP------------YGACLLGSINLARLVEEPFTATAHVDIAKLEARVATAVR 321 Query: 488 ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 LD ++D YP+P + A +R +G+GV A L G Y +A + I Sbjct: 322 FLDNVIDISRYPVPQQAQEARAKRRIGLGVTGLADALIFLGLPYGSAAAREQAARWMAII 381 Query: 548 QYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 Q +AS LA E+GA P ++ + + + +RE+I Sbjct: 382 QNAAYRASAALAAEKGAFPLYDANVV----------------LTRPNITRLDDDVREAIA 425 Query: 608 THGLRNSTLSALMPSETSSQISN-ATNGIEPPRGYVSIKASKD---GILRQVVPDYEH-- 661 +GLRN L+++ P+ T S ++ ++GIEP +V + G + V D+ H Sbjct: 426 ANGLRNGCLTSIAPTGTISLLAGNVSSGIEPVFDFVFRRRVLSDGGGAEEETVEDFAHRA 485 Query: 662 ----------LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPM 711 L +A+ E ++ + +Q ++D +IS N + Sbjct: 486 FRDAFGDDAVLPEAFVTA-ETLTPSEHVAMQATLQPYVDSAISKTINCPE------DISF 538 Query: 712 QQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDG 753 + + AY G+K T Y N G+ +++ D Sbjct: 539 ESFRDIYIEAYDSGLKGCTTYRPNAITGSVLSREAPANGDADKS 582 >UniRef50_D2BQ84 Ribonucleoside-diphosphate reductase n=32 Tax=Lactobacillales RepID=D2BQ84_LACLK Length = 722 Score = 514 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 162/694 (23%), Positives = 278/694 (40%), Gaps = 48/694 (6%) Query: 94 YGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEG 153 ++E D + +V+ + LE Y E + + S+ A + Sbjct: 45 PNRYEADTYIDKLNWLVKEEYLEAEFLEKYKPEFITNLRKELSKFEFHFDSFMAAYKFYN 104 Query: 154 KYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMS 213 +Y ++N E + ++ A + + A+ + TP Sbjct: 105 QYAMKNNDGSLYLEDFEDRVLMNALYMADG-----DEKLANNLAFAMINRRYQPATPTFL 159 Query: 214 GVRT-PTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGE 272 +F SC L++ D ++SI T ++ ++ G+G+N +RA G+PI+G + Sbjct: 160 NAGRKRRGEFVSCFLLQLTDDMNSIGRTINSALQLSKNGGGVGLNLTNLRAAGAPIKGYD 219 Query: 273 AFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRH 332 G +P K F+ A +Q G R GA ++ ++H ++ L K E RV+ Sbjct: 220 GVAAGVVPVMKLFEDAFSYANQLGQRQGAGVVYLSLFHPDIMEFLSTKKENADEKIRVKT 279 Query: 333 MDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQR 392 + GV + Y + KGE + LF P V Y FA+ + Y K + IRK Sbjct: 280 LSLGVTVPDKFYELVKKGETMYLFEPYFVEKYYGKPFAEVD-ITAEYDKMVANPEIRKTP 338 Query: 393 VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDV 452 + + EL + + + +G YI NVD N +P D + SNLC EI P Sbjct: 339 INSRELEQELSKLQQESGYPYIVNVDTVNQANPVD---GVISMSNLCSEILQVQTPSVLN 395 Query: 453 NDEN----GEIALCTLSAFN-LGAINNLDELEELAILAVRALDALLDYQDYP-IPAAKRG 506 +D+ G C L + N L + + +E VRAL + + + +P ++G Sbjct: 396 DDQTYKVVGTDVACNLGSTNVLNMMTSSNEFGTSIEAMVRALTFISETSNLDTVPTVRKG 455 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-AC 565 +G+G + +LA++ Y A T F + YY L ASN+LA E+G + Sbjct: 456 NDEMHAIGLGAMGLHSFLAQNQIHYDSKEAVEFTSVYFMLLNYYTLVASNKLAVEKGSSF 515 Query: 566 PWFNETTYAKGILPIDTY------------KKDLDTIANEPLHYDWEALRESIKTHGLRN 613 F ++ YA G D Y ++L P DW ALR+++KT GL N Sbjct: 516 KNFEKSAYADGS-YFDKYLTHDYFAAVSSKVQELFKGIAVPTIEDWTALRDTVKTSGLYN 574 Query: 614 STLSALMPSETSSQISNATNGIEPPRGYVSIK-ASKDGILRQVVPDYE-HLHDAYELLWE 671 S A+ P+ + S I++ ++ I P + + K G + Y+ ++ Sbjct: 575 SYRMAVAPNGSISYINDCSSSIHPIVNRIEERQEKKVGKIYYPAAGLATETIPYYKSAYD 634 Query: 672 MPGNDGYLQLVGIMQKFIDQSISANTNYDPS--------RFPSGKVPMQQLLKDLLTAYK 723 + + + +DQ +S + + + K+ + L AYK Sbjct: 635 TDM-RAVIDVYAAATEHVDQGLSLTLFMRSTLPEGLYEWKVANNKMTTRDLSILRNYAYK 693 Query: 724 FGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESG 757 G+KT+YY T D + + CES Sbjct: 694 KGIKTIYYIRT-------FTDDQEEVGANQCESC 720 >UniRef50_Q6AJC4 Ribonucleoside-diphosphate reductase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJC4_DESPS Length = 785 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 123/707 (17%), Positives = 232/707 (32%), Gaps = 131/707 (18%) Query: 93 AYGQFEPPALYDHVVKMVEMGKYDNHL-LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQL 151 F Y + + G N+ L Y + +K++ D + + A L Sbjct: 16 TLDIFAVFWGYMVFLSLNRKGYPANYFYLIQYKNDIYKEVIMAPDVM-EQVLTTTAETVL 74 Query: 152 EGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRL-----QYVKRFYDAVSTFKIS 206 +Y +++ E + L VA + Q F+ + Sbjct: 75 ARRYYLKDDAGNS-LEDWKALAHRVAEAVAPEDATGKNEVTGIKQLRDDFFTMIYQLDFL 133 Query: 207 LPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGS 266 +P + T Q S+C ++ DS+D I G G + RIRA + Sbjct: 134 PNSPCLMNAGTEIGQLSACFVLPVEDSMDGIFTAIRNGALVHKTGGGTGYSFSRIRACNA 193 Query: 267 PIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVE 326 ++ +G + F F A ++ QGG R GA + H ++ + + K + Sbjct: 194 SVKSTHGVASGPLSFAAVFDAATETIKQGGKRRGANMGVLRVDHPDIMAFISAKE----D 249 Query: 327 GNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDD 386 ++ + ++ V I L L ++ L PS Sbjct: 250 QDKFNNFNFSVAITDLFMAALEADKEYDLIEPST-------------------------- 283 Query: 387 SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPT 446 ++ AVE+F+ ++ G + +D N + P + +N C E L Sbjct: 284 GEVMGQLNAVEVFAKIVDLAWHNGEPGVLFIDAANRDNT-TPQLGDFEATNPCGEQWLLP 342 Query: 447 KPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALDALLDYQDYPIP 501 C L + NLG + L ++ A LD ++D +PIP Sbjct: 343 ------------YESCNLGSINLGNFVKNDEVDYSRLGQIVKTATCFLDNVIDCNVFPIP 390 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 + R +G+G++ L + Y L + + I+ + S +LA+E Sbjct: 391 EIGEMTLKTRKIGLGIMGLHDLLIQLAIPYGSEEGRLLAAEVMQFIRDRCEEQSRKLAEE 450 Query: 562 QGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMP 621 +GA P ++ I+ Y RN+ L+++ P Sbjct: 451 KGAFPAYDAE--------INLYPA-------------------------RRNAALTSIQP 477 Query: 622 SETSSQISNATNGIEPPRGYVSIKASKD-------------------------------- 649 + T S I++ +G EP V +K D Sbjct: 478 TGTVSMIADCASGCEPYFSIVMMKHVMDGDRLLMVNKHFEKIAREQGFYSDDLMVKVAES 537 Query: 650 GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKF-IDQSISANTNYDPSRFPSGK 708 G + E +A+ ++ + ++++ I+Q +D SIS N + Sbjct: 538 GTVVGHAEIPEKWQEAFRTAQDIS-PEDHIRMQAILQNSGVDSSISKTINLPKT------ 590 Query: 709 VPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDG 753 + + ++ YK G K T+Y +RD + + + Sbjct: 591 ATREDVKYSYISGYKLGCKGLTVYRDGSRDDQVLNTTEQSRASEKSA 637 >UniRef50_B4W8S5 Ribonucleoside-diphosphate reductase n=2 Tax=Caulobacteraceae RepID=B4W8S5_9CAUL Length = 753 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 134/640 (20%), Positives = 230/640 (35%), Gaps = 104/640 (16%) Query: 146 AAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKI 205 A + KY + G + + + VAA L P +TR ++ RF + + ++ Sbjct: 7 LAGEIWNSKYRFR-PHEGTGDATVEATWDRVAAALAEAEPTKTRARWRARFRETLDAYRF 65 Query: 206 SLPTPIMSGVRTPTR-QFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRA 263 I++G T +C ++ D LD I + Q G+G++ +R Sbjct: 66 LPAGRILAGAGTGRAVTLFNCFVMGVVPDDLDGIFQHLREAAVTLQQGGGVGMDFSTVRP 125 Query: 264 LGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNR 323 G+ +RG A +G + F + + ++ G R GA + H ++E+ + K Sbjct: 126 SGALVRGVGAEASGPLSFMDVWDSMCRTIMSAGQRRGAMMGCLRIDHPDIEAFIDAKR-- 183 Query: 324 GVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE 383 + R R+ + V + L D L Sbjct: 184 --DAVRFRNFNLSVLVPDAFMAALDADADWPLVF-------------------------- 215 Query: 384 KDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIA 443 D ++ V+A +L++ +MQ + +D N + + SN C E Sbjct: 216 --DGEIRRTVRATDLWTRLMQATYDAAEPGVIFIDRVNAANNL-AHCEVIAASNPCGEQM 272 Query: 444 LPTKPLNDVNDENGEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDALL 493 LP C L + NL + + +L +L AVR LD ++ Sbjct: 273 LPP------------YGACLLGSINLARLVSAPFEPDAALDEQKLADLTRTAVRMLDNVI 320 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 D +P+PA + A +R LG+GV A L G RY + A LT + I+ + Sbjct: 321 DISRFPLPAQEAEARAKRRLGLGVTGLADALIFCGARYGEDRAVALTGRWLGLIRREAYR 380 Query: 554 ASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 AS ELA E+GA P ++ + L RE I HGLRN Sbjct: 381 ASAELAAEKGAFPLYD-----------------PAMLQRPNLASLDAETRELIGLHGLRN 423 Query: 614 STLSALMPSETSSQISN-ATNGIEPPRGYVSIKASKD--GILRQVVPD------YEHLH- 663 L+++ P+ T+S ++ ++GIEP + + G R+ + ++ L Sbjct: 424 GCLTSIAPTGTTSLLAGNVSSGIEPVFAFAYTRKVMQPDGTRREEAVEDYALALWKTLKG 483 Query: 664 ----------DAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQ 713 DA+ + +L++ Q ID SIS N + + Sbjct: 484 PDAPLDSAPGDAFVSAQ-TLTPEHHLRMQAAAQAQIDSSISKTINCPE------NIDFEA 536 Query: 714 LLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQD 751 Y+ G K T Y N G+ + + Sbjct: 537 FSDVYRQGYRMGCKGLTTYRPNAITGSVLSVESPASVPAA 576 >UniRef50_A2DI13 Ribonucleoside-diphosphate reductase n=1 Tax=Trichomonas vaginalis RepID=A2DI13_TRIVA Length = 614 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 118/660 (17%), Positives = 230/660 (34%), Gaps = 110/660 (16%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVST 202 F+ A+K ++ +YLV N G++YE+ + ++ VA L S + ++ K+F + Sbjct: 20 FTSNAIKVMKARYLVHNEE-GKVYETPEQMFTRVAKALASVET--DKEKWTKKFEKVMMN 76 Query: 203 FKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR 262 F+ ++ T S+CV++ DSLDSI T +GIG ++R Sbjct: 77 FEFIPAGRTLANAGAKTDLVSNCVVLHMEDSLDSIFQTLQDAALLQQAGSGIGFPFHKLR 136 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 G + +G + F + + A + Q G R GA + H ++ + K Sbjct: 137 PAGYKCKRTLGSSSGPLSFLRIYAEAFRIIQQHG-RHGANMAIMRVDHPDIIEFIHAKEQ 195 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 G + ++ V R++K + + + + Sbjct: 196 PGTYE----NFNFSVAFTDEFMERVIKNDPSPWMCKWNGEKMAPRYITR--------DAA 243 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEI 442 + ++I+ + A EL + ++ + G +D N +P P + P+ N C E Sbjct: 244 GRVENIQPLTISAPELMNEIIHLAWTNGEPGCVFIDTVNKANPL-PGLGPIECCNPCGEQ 302 Query: 443 ALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELAILAVRALDALLDYQD 497 L + C L A NL + LEE+ A+R LD ++ Sbjct: 303 FLHSGD------------ACNLGAINLEKFVVDGKIDFKHLEEVTRTAIRMLDNVVSLTK 350 Query: 498 YPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNE 557 +P+ R +G+G++ A L Y + + +Q + S Sbjct: 351 FPVQRVTDMFTNNRRIGLGIMGLADLLFLMKLPYDSEEGRACAEEVMKCVQDSAIDESKR 410 Query: 558 LAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLS 617 L E+G+ P F ++ +A + +RN++L+ Sbjct: 411 LGLEKGSFPNFEKSVWADKVPA-------------------------------MRNTSLT 439 Query: 618 ALMPSETSSQISNATNGIEPPRGYVSIKAS------------------------------ 647 + P+ ++S + + ++G+EP + + Sbjct: 440 NVAPTGSTSMLLDVSSGVEPYFALAYRRGNCLAGPMKPFVNKHLQKALEDCGCFTDKIMD 499 Query: 648 ---KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRF 704 + G L V E L + ++ D ++ + +QK +IS N+ Sbjct: 500 KILETGTLANVTEVPEQLRRVFVTSLDIKAED-HIAMQARVQKHCCNAISKTINF----- 553 Query: 705 PSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQD---DGCESGAC 759 + + + +K G K T+Y +RD + D C+ G C Sbjct: 554 -RREATEDDVRAGFIEGWKNGCKGLTVYRNGSRDAQVLETNVKNDKPVKTFVDTCKDGKC 612 >UniRef50_C6IVG4 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillales RepID=C6IVG4_9BACL Length = 864 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 120/601 (19%), Positives = 235/601 (39%), Gaps = 66/601 (10%) Query: 159 NRVTGEIYESAQFLYILVAACLFSNYP-RETRLQYVKRFYDAVSTFKISLPTPIMSGVRT 217 ++T I ++ + ++ +A + S E + ++ ++F + +K+ I +G Sbjct: 81 EKLTLNIEKTPEEMWDRLAKAMASVEETPEKQKEWEEKFRYILDDWKLVPGGRIAAGAGA 140 Query: 218 PTR-QFSSCVLIECG-DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFH 275 +C +I DS I T S + + +++ G+GIN +R + +RG Sbjct: 141 SDELTLFNCYVIPSPKDSRGGIMETLSEMTEIMARGGGVGINLSSLRPRRAIVRGVNGSS 200 Query: 276 TGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDY 335 +G + + F QGG R GA L WH +V + +K G +V + + Sbjct: 201 SGAVSWGGLFSYTTGLIEQGGSRRGALMLMINDWHPDVLDFITVKQTMG----QVTNANL 256 Query: 336 GVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIR--KQRV 393 V ++ + + D L P Y+ E ++ K++ D + V Sbjct: 257 SVCVSNAFMKAVKEDLDWDLVFPDTTYEDYN------EVWDGDLDKWKADGRKVIHYRTV 310 Query: 394 KAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN 453 KA E++ +++ + + +++ N S P+ +N C E LP Sbjct: 311 KAREIWHTIIESAWKSAEPGVVFMEYYNQMSN-SWYFNPIICTNPCGEQGLPGW------ 363 Query: 454 DENGEIALCTLSAFNLGAINN-------LDELEELAILAVRALDALLDYQDYPIPAAKRG 506 +C LSA NL + DEL +VR LD +++ Y ++ Sbjct: 364 ------GVCNLSAMNLSKFYDEEKHDVAWDELATTTRYSVRFLDNVINKTPYHFEENEKN 417 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 R +G+G + A + K RY + K + I AS ++A+E+G+ P Sbjct: 418 QKKERRVGLGTMGLAELMIKLNIRYGSPESLEFLDKLYGFIAKEAYLASADIAEEKGSFP 477 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 F + + + + + E+++T G+RN T+ P+ ++ Sbjct: 478 AFEADKFLQSGFMKNMTEVYP-------------EVGEAVRTKGIRNVTIITQAPTGSTG 524 Query: 627 QISNATNGIEPPRGYVSIKASKDGILRQVVPDYEH---------LHDAYELLWEMPGNDG 677 + + GIEP + + S+ G Q VP + L D + ++ D Sbjct: 525 TMVGTSTGIEPYFAFKYYRQSRLGFDEQFVPIAQEWMDAHPGEPLPDYFVTAMDLSAED- 583 Query: 678 YLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTR 735 ++++ +Q+++D SIS N ++ + A+ G K T+Y +R Sbjct: 584 HIRVQAAIQRWVDSSISKTANCP------SDFTVEDTKRLYELAFDLGCKGVTIYRDGSR 637 Query: 736 D 736 D Sbjct: 638 D 638 >UniRef50_Q2LW62 Ribonucleoside-diphosphate reductase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LW62_SYNAS Length = 551 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 118/614 (19%), Positives = 222/614 (36%), Gaps = 103/614 (16%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY---PRETRLQYVKRFYDA 199 A+ L +YL+++ G + E+ + L+ VA + P + + FY+ Sbjct: 7 LDDNALLVLRERYLIRDEA-GTLLETPEELFRRVACSVSQGENNDPEGRSAEMEEAFYEM 65 Query: 200 VSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAG 259 +++ + +P + P Q ++C ++ DSLDSI + K G G + Sbjct: 66 MTSLEFLPNSPTLMNAGRPLGQLAACFVLPVEDSLDSIFDSVKLTAKIHQTGGGTGFSFS 125 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 R+R ++ +G + F + F A ++ QGG R GA + H ++ + + Sbjct: 126 RLRPKNDVVKSTMGVASGPVSFIRVFNCATEAIKQGGTRRGANMGILRIDHPDIMEFVAI 185 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 K + + + + V I + D+ L +P Sbjct: 186 KRDPAE----LTNFNLSVAITDEFMRSYEENRDVALINPRT------------------- 222 Query: 380 TKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLC 439 +V A EL + + ++G + +D N +P P + + +N C Sbjct: 223 -------KKAAGKVNARELLRFIAEAAWASGEPGVIFLDAINRANP-TPHVGEIEATNPC 274 Query: 440 LEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELAILAVRALDALLD 494 E L C L + NL I + L++L L VR LD +++ Sbjct: 275 GEQPLLP------------YESCCLGSINLSRIVRNGGIDWQRLQKLTHLGVRFLDDVVE 322 Query: 495 YQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKA 554 YP + G R +G+GV+ FA+ L + G Y A + I+ A Sbjct: 323 VSTYPSEEIRAMTSGNRKIGLGVMGFAHLLIRLGIPYDSPDAERTGGEIIRLIERESKIA 382 Query: 555 SNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNS 614 SN LA+++G P F + + + L RN+ Sbjct: 383 SNRLAEKRGPFPNFKGSVWDRKNLLQ-------------------------------RNA 411 Query: 615 TLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY-----------EHLH 663 T + + P+ T S ++ ++G+EP + GI +V E Sbjct: 412 TTTTIAPTGTLSILAGTSSGVEPIYDIRYKRILPGGIEVEVEDPLWRKAKDRPDADELRR 471 Query: 664 DAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYK 723 + +E+ +L + Q +D ++S N + +L + AY+ Sbjct: 472 RLFRKAYEVS-PFAHLNIQRTFQSSVDNAVSKTVNLPET------ATADDILDIYVAAYR 524 Query: 724 FGVK--TLYYQNTR 735 G+K T++ +R Sbjct: 525 MGLKGTTVFRNKSR 538 >UniRef50_Q2RP92 Ribonucleotide reductase large subunit n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RP92_RHORT Length = 786 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 122/630 (19%), Positives = 226/630 (35%), Gaps = 73/630 (11%) Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPT 209 KY + + + + + + V +++ PR R + +A+ + Sbjct: 10 IWREKYRLVDPDGSSLEQGPEDSFARVCRGIYARDPR--RAVHEPLALEAMKALEWCPGG 67 Query: 210 PIMSGVRTPTR-QFSSCVL-IECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSP 267 I +G T R +C + + D +D I + + Q GIG + +R G+ Sbjct: 68 RIHAGAGTDRRVTLINCFVNMIVPDRMDGIMEALTRAALTMQQGGGIGTDFSTLRPRGAK 127 Query: 268 IRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEG 327 +R + +G + F + + + GG R GA H ++ + + K G Sbjct: 128 VRRTGSVSSGPLSFMEIWHAMCGTIMSGGARRGAMMGTMICDHPDLPAFITAKAQAG--- 184 Query: 328 NRVRHMDYGVQINKLMYTRLLKGEDITL---FSPSDVPGLYDAFFADQEEFERLYTKYEK 384 R+ + + V + + + L P+D L + E + Sbjct: 185 -RLTNFNVSVLVTDAFMRAVDEDATWDLGFSVPPADPARLVAVTERNGEPWY-------- 235 Query: 385 DDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIAL 444 +R+ A L+ +++ + +D N + + +N C E L Sbjct: 236 ----VYERLSARALWEKIIRTTYDHAEPGVIFIDRVNERNNL-AYCETISCTNPCGEQPL 290 Query: 445 PTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAK 504 P P D N +A+ F A + L E+A + VR LD +LD ++P+ Sbjct: 291 P--PNGDCNLGCVNLAVLVRDPFTPQARFDDARLAEVAAIGVRFLDNVLDVSNFPVEDQA 348 Query: 505 RGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA 564 + A +R LG+G++ L G RY +A T + ++ +AS ELA E+G Sbjct: 349 KEAQAKRRLGLGIMGLGNALQMLGLRYGSPAAIAETRRIMALLRDAAYRASAELAGERGP 408 Query: 565 CPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET 624 P ++ +A + + LR I GLRN + + P+ T Sbjct: 409 FPLYDRD----------------QLLARPFIQELPDDLRAKIAEQGLRNGVMLTIAPTGT 452 Query: 625 SS-QISNATNGIEPPRGYVSIKASKD-----GILRQVVPDYEH----------------L 662 ++ +N ++G+EP G+ + + +E L Sbjct: 453 TAIYYNNVSSGLEPTFGWRYFRKVLRPDGGHDEFAVIDAGFESWCRTRGLDPATAPLTGL 512 Query: 663 HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAY 722 D+ E+ D +L++ Q+FID SIS N + AY Sbjct: 513 PDSMVTALELSVED-HLRMQAACQEFIDASISKTINCP------ADMSYDSFAAVYKLAY 565 Query: 723 KFGVK--TLYYQNTRDGAEDAQDDLVPSIQ 750 + G K T Y + G+ + D P+ Sbjct: 566 EMGCKGCTTYRPSGTRGSVLSLDATTPAAA 595 >UniRef50_C6D5S5 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Paenibacillus RepID=C6D5S5_PAESJ Length = 864 Score = 501 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 120/614 (19%), Positives = 237/614 (38%), Gaps = 64/614 (10%) Query: 159 NRVTGEIYESAQFLYILVAACLFSNYP-RETRLQYVKRFYDAVSTFKISLPTPIMSGVRT 217 ++T I ++ + ++ +A + E R + +RF + +K+ I +G Sbjct: 76 EKLTLTIEKTPEEMWNRLAGAMAGVEQGEEKRRTWTERFRYILDDWKLVPGGRIAAGAGA 135 Query: 218 PTR-QFSSCVLIECG-DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFH 275 +C +I DS I T S + + +++ G+GIN +R + + G Sbjct: 136 SDELTLFNCYVIPSPKDSRGGIMTTLSEMTEIMARGGGVGINLSSLRPRRAVVAGVNGSS 195 Query: 276 TGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDY 335 +G + + F QGG R GA L WH +V + +K G +V + + Sbjct: 196 SGAVSWGGLFSYTTGLIEQGGSRRGALMLMINDWHPDVLDFITVKQTMG----QVTNANL 251 Query: 336 GVQINKLMYTRLLKGEDITLFSPSDVPGLYDA-FFADQEEFERLYTKYEKDDSIRKQRVK 394 V ++ + + D L P YD + D E +++L K + + V+ Sbjct: 252 SVCVSNAFMKAVKEDLDWELVFPDTKETDYDELWDGDLEAWKKLGKKV-----VHYKTVR 306 Query: 395 AVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND 454 A +++ +++ + + +++ N S P+ +N C E LP Sbjct: 307 ARDVWHTIIESAWKSAEPGVVFMEYYNQMSN-SWYFNPIICTNPCGEQGLPGW------- 358 Query: 455 ENGEIALCTLSAFNLGAINN-------LDELEELAILAVRALDALLDYQDYPIPAAKRGA 507 +C LSA NL + +EL ++ +VR LD ++D Y ++ Sbjct: 359 -----GVCNLSAINLSKFYDESKHDVNWEELGKVTQWSVRFLDNVIDTTPYHFEENEKNQ 413 Query: 508 MGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW 567 R +G+G + A + K G RY + K + + AS E+A E+G+ Sbjct: 414 KKERRVGLGTMGLAELMIKLGVRYGSPESLLFLDKIYGFMAREAYLASAEIASEKGSFEA 473 Query: 568 FNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQ 627 F+ + + + + + E++ G+RN T+ P+ ++ Sbjct: 474 FDAEKFLQSGFMKNMVSEFP-------------EVGEAVLAKGMRNVTVITQAPTGSTGT 520 Query: 628 ISNATNGIEPPRGYVSIKASKDGILRQVVPDY---------EHLHDAYELLWEMPGNDGY 678 + + GIEP + + S+ G +Q+VP E L D + + D + Sbjct: 521 MVGTSTGIEPYFAFEYFRQSRLGFDKQLVPIAQAWKDAHPGEELPDYFVTAMNLSAKD-H 579 Query: 679 LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 +++ +Q+++D SIS N +++ + A+ G K T+Y +RD Sbjct: 580 IRVQAAIQRWVDSSISKTANCP------SDFTVEETKELYEMAFDLGCKGVTIYRDGSRD 633 Query: 737 GAEDAQDDLVPSIQ 750 + Sbjct: 634 VQVLSTKKDDEKPD 647 >UniRef50_B1V8V8 Ribonucleoside-diphosphate reductase n=61 Tax=Bacteria RepID=B1V8V8_PHYAS Length = 856 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 147/677 (21%), Positives = 275/677 (40%), Gaps = 45/677 (6%) Query: 101 ALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR 160 L + + + Y+ L Y E++ K + + ++ + Y +++R Sbjct: 207 TLKEKLTFLQTNEYYETDFLSQYNEQQIKDIYKIAYQKQFRFSTFMGAFKFYNDYALKSR 266 Query: 161 VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPT- 219 E+ + C+ + Y + + KR ++ + TP + Sbjct: 267 DKKYYLETYEDR-----LCVNALYHAQGDFEIAKRLIKSLINQDFTPATPTLLNAGKKHR 321 Query: 220 RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCI 279 +F SC L+E GDSL+ I + ++ G+ IN +RA G I+G + G + Sbjct: 322 GEFVSCFLLEAGDSLNDIARINEFSMQLSKIGGGVSINITNLRAKGESIKGIKGVCKGVV 381 Query: 280 PFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQI 339 K + + Q G R GA ++ ++H ++E L K E RV+ + GV + Sbjct: 382 GVCKLLDHSFRYADQMGQRTGAGAVYLSVFHADIEDFLSTKKLNADEDVRVKTLSLGVIV 441 Query: 340 NKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQ-EEFERLYTKYEKDDSIRKQRVKAVEL 398 M K E + F P V Y+ FAD + Y + +RK+ ++ +L Sbjct: 442 PNKMIELARKNEVMYTFYPHTVFLEYEKNFADIAVNMDYWYDILVSNPKVRKKAIQPRQL 501 Query: 399 FSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVN----- 453 L+ + + +G Y+ D+ N ++ + V+ SNLC EI PT + + Sbjct: 502 LELIARMQGESGYPYLMFCDNVNQNN---TSHLQVKFSNLCTEILQPTITSHYTDYNHTQ 558 Query: 454 -DENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYP-IPAAKRGAMGRR 511 D+ G C L++ ++ + N + ++E +A+ ++ + + +PA + R Sbjct: 559 EDKIGMDVSCNLASGHMSNMINNNTIKETVFMAMEVMNTVSMKTNINYVPAVAKANRLNR 618 Query: 512 TLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNE 570 ++G G++ +LA++ + +L F AI YY L S + AK+ G F + Sbjct: 619 SVGFGIMGHHGFLAQNYIAFGSEENKDLIDVFFNAINYYSLLHSCQKAKKTGQKFYLFEK 678 Query: 571 TTYAKG--------ILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPS 622 + YA G ILP K + P DW+ L++ ++ GL NS A+ P+ Sbjct: 679 SHYADGSYFKGRGEILPKTDKIKKMFANIPLPSEKDWQQLKKDVQQFGLFNSHRLAVAPN 738 Query: 623 ETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLV 682 T I T + P + V + + +P + Y ++M + ++ Sbjct: 739 GTIGYIMGTTPSLTPIKQLVEERTYGNSKTYCPMPGLKETSFMYVTAYKMNKY-QLIDVI 797 Query: 683 GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQ 742 QK +DQ IS + + ++L + L A+ G+KTLYY T+ Sbjct: 798 ATAQKHVDQGISFELGI------TSDITTRELQRYYLYAHHKGIKTLYYTRTQ------- 844 Query: 743 DDLVPSIQDDGCESGAC 759 ++ D CE+ Sbjct: 845 -----KLKVDECEACGV 856 >UniRef50_Q11ZE1 Ribonucleotide reductase large subunit n=2 Tax=Burkholderiales RepID=Q11ZE1_POLSJ Length = 858 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 124/671 (18%), Positives = 215/671 (32%), Gaps = 119/671 (17%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKIS 206 ++ L KY + T ++ VA + E R +Y + F+D + I Sbjct: 21 SIDVLLEKYAKGDEFTET------EIFARVAKGIAQAEQPELREKYERVFFDNMMRGAIG 74 Query: 207 LPTPIMSGVRTP-TRQFSSCVLIECGDSLDS--------INATSSAIVKYVSQRAGIGIN 257 IMS T ++C + GD++ I + + + G+G + Sbjct: 75 -AGRIMSAAGTGIKATLANCFVQPVGDAIQGVDTEGYPGIYEALREAAETMRRGGGVGYD 133 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 RIR GS ++G + +G + F + K+ G R GA + H ++ + Sbjct: 134 FSRIRPRGSVVKGTASSASGPCSYIDVFDASCKTVESAGARRGAQMGVMKISHPDILEFI 193 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFER 377 K G R + + V I + E L ++ E+ Sbjct: 194 TAKREVG----RWNNFNVSVGIVDGFMAAVEANEMWPLVHKAEPS---------VEQQRA 240 Query: 378 LYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSN 437 E D + V A E++ +M+ I +D N + + + +N Sbjct: 241 GAYLRESDGLWVYREVPAAEIWDTVMKSCYDFAEPGIVFLDLMNLDNNL-SYVETIEATN 299 Query: 438 LCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVR 487 C E LP C L L + + + + R Sbjct: 300 PCAEQPLPP------------YGCCDLGPIILPKFVSRAFTERAAFDDEGFKAAVKIQTR 347 Query: 488 ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 LD +L +P+ ++ A +R +G G LA G RY+ + + Sbjct: 348 FLDNVLSVTHWPLEQQRKEAEAKRRIGAGFTGLGDMLAMLGIRYNSIEGVEFSRHVALMM 407 Query: 548 QYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 + +AS +LA E+G P F+ Y K ++L++ I+ Sbjct: 408 RDAAYEASIDLAIEKGPFPLFDADKYLK---------------KGTFASRLPKSLKDRIR 452 Query: 608 THGLRNSTLSALMPSETSSQIS--NATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDA 665 HG+RNS L ++ P+ T S NA+NGIEPP + + G +H Sbjct: 453 RHGIRNSHLLSIAPTGTVSLAFADNASNGIEPPFALAYTRKKRVGDGHVNYNVVDHAFRV 512 Query: 666 Y-----------------------------------------ELLWEMPGNDGYLQLVGI 684 + EM + +L ++ Sbjct: 513 FLETVCAQELRAPLLEAVSRYQPAFEVAGKTYQVKDCIPPSIVTAQEMSAAE-HLAVMAA 571 Query: 685 MQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL--YYQNTRDGAEDAQ 742 +Q ID +IS N P + A+K +K L Y N GA + Sbjct: 572 VQPLIDTAISKTVNVPE------DYPYDDFKNLYMQAWKANLKGLATYRPNKTLGAVLSV 625 Query: 743 DDLVPSIQDDG 753 + Sbjct: 626 GTAATEAKSVE 636 >UniRef50_A7HK53 Ribonucleoside-diphosphate reductase n=11 Tax=Thermotogaceae RepID=A7HK53_FERNB Length = 841 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 116/708 (16%), Positives = 228/708 (32%), Gaps = 138/708 (19%) Query: 128 FKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY--- 184 + + + I+H +D+ S A K L +Y ++ + +S + VA + + Sbjct: 2 YSTLTSVIEHWKDVELSKNAYKILSERYFLKTPSGEFLEKSWDDICRRVARVIATAELVN 61 Query: 185 ----PRETRLQ-------YVKRFYDAVSTFKISLPTPIMSGVR----------------- 216 ++ + + F+D + + +P + Sbjct: 62 NPELKEKSPFEQLDEVKFWESTFFDFLKSRIFIPNSPTLFNAGMGVRHELLWKSIDDMTL 121 Query: 217 ----------TPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGS 266 S+C ++ DS++ I GIG N R+R GS Sbjct: 122 EDYWEIYNSRNHLHMLSACFVVPVEDSIEGIFEAVKEYALITKAGGGIGSNFSRLRPKGS 181 Query: 267 PIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVE 326 + G +G + F F +AV QG R GA + H ++E + K Sbjct: 182 FVAGTHGQASGPVSFMHVFNSAVGVVEQGYRRRGALMGILNIDHPDIEEFITAKEGN-DG 240 Query: 327 GNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDD 386 ++ + V I R L + D E + Sbjct: 241 EKVLKFFNISVGIT---MDR---------------QELLKLYMEDGEIELKHPKCNGS-- 280 Query: 387 SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPT 446 +RVK EL + + + TG + + N + P + + +N C EI L Sbjct: 281 ----KRVKVRELINKIAKNAWKTGDPGLAFLSEMNKYYAMYPEM-TIESTNPCGEIGLAP 335 Query: 447 KPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALDALLDYQDYPIP 501 C L + ++ + + LAVR LD ++D +P+ Sbjct: 336 ------------YEACNLGSIDVAKFYMNGEFYWEAFAQATRLAVRFLDDVIDVNVFPLE 383 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 ++ R +G+G++ FA L Y+ + + SN+LA+ Sbjct: 384 KIRKAVTDSRRIGLGIMGFADLLYMMDIPYNSHEGRQFAADMTAYMAIHGHDESNKLAQL 443 Query: 562 QGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK--THGLRNSTLSAL 619 +G+ P F ++ Y Y++D + L+E K G RN + + Sbjct: 444 KGSFPLFEKSRY---------YREDEFAPFAMGMSKYDNELKEVFKESKKGKRNVAVLTI 494 Query: 620 MPSETSSQISNATNGIEPPRGYVSIKAS-------------------------------- 647 P+ + S I++ ++G+EP ++ Sbjct: 495 APTGSISNIADTSSGLEPNFLLAYVRYMNKHDGTKEALFYVNKVLESKLNKEILERVKDK 554 Query: 648 --KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 + G L+ + E + + ++ +L + Q+++D +IS N S Sbjct: 555 LVERGSLQDIPEIPEEIKRVFVTAMDIS-PMDHLLMQDAFQRYVDNNISKTINMPNS--- 610 Query: 706 SGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQD 751 + +L L A K ++ T+Y + + + Sbjct: 611 ---ATEEDVLNIYLEAMKLNIRGLTIYRDGSLQTQVLTSAKNLKTKDA 655 >UniRef50_B3SZX1 Putative Ribonucleotide reductase, barrel domain protein n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZX1_9ZZZZ Length = 817 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 131/692 (18%), Positives = 255/692 (36%), Gaps = 115/692 (16%) Query: 102 LYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFID------------HDRDMTFSYAAVK 149 + + + GK + L EE +++ +D + Sbjct: 1 MAEAIELNFPSGKTTSGELNMMVEETVRELTKEVDGQNISEEFTPYLTENYYKDDSLGAD 60 Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY-PRETRLQYVKRFYDAVSTFKISLP 208 L+ KYL L+ A L S ++ R + K+FY + F+ + Sbjct: 61 VLKNKYLAPWENH------PYELWQRQAKALASVERTKKLRDTWEKKFYYILEDFRFTPG 114 Query: 209 TPIMSGVRTP--TRQFSSCVLIEC-GDSLDSINATSSAIVKYVSQRAGIGINAGRIRALG 265 IM G T ++C ++ DS++SI T + G G + +R G Sbjct: 115 GRIMHGAGREDITTTLNNCYVVGIQDDSINSIYRTIEEEARTYKYGGGCGHDLSVLRPSG 174 Query: 266 SPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGV 325 I+G G + F F + +Q G R GA + H ++E + +K Sbjct: 175 DAIKGTGGESCGPVGFMNLFSENTNTIAQHG-RRGANMQTLRVDHPDIEKFIEIKT---G 230 Query: 326 EGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKD 385 + + V++ + V + + + L K Sbjct: 231 DIHMVKYSNISVLLTHRFMEAVENDSEFDL----------------------------KW 262 Query: 386 DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALP 445 + + +KA +L++ +++ ++ + D + + +P+ +N C E LP Sbjct: 263 NDQVYKTIKARQLWNKIIEHAHTSAEPGLLFWDTMIDYHNAE-YCSPLVSTNPCAEQPLP 321 Query: 446 TKPLNDVNDENGEIALCTLSAFNLGAINN------LDELEELAILAVRALDALLDYQ--D 497 + C L + NL + +DE ++ +A R LD ++DY Sbjct: 322 ------------DGGCCNLGSINLERFVDGEGNFMIDEFKDTVGIATRFLDNVIDYNLER 369 Query: 498 YPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNE 557 + + + K A R +G+G++ L + G +Y A + + + + S E Sbjct: 370 HALESQKDNATKDRRIGLGILGLGDMLVRMGIKYDSDDAIQTVEQVMQIFRDGAYETSVE 429 Query: 558 LAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLS 617 LA E+G+ P F+ Y K + + L IK +G+RNST+ Sbjct: 430 LANEKGSFPSFDWAGYRKSQFIKNLPRN----------------LNNKIKENGIRNSTVL 473 Query: 618 ALMPSETSSQISNATNGIEPPRGYVSIKASKDG---------------ILRQVVPDYEHL 662 + P+ + + ++ T+GIEP + K I++++ + E+L Sbjct: 474 TVPPTGSGAIVARVTSGIEPIFATSYTRRVKKNDGFGKTFNEYKVYHPIIKKLFGNDENL 533 Query: 663 HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAY 722 D ++ +++ G++QK+ID SIS+ N V ++ + +TAY Sbjct: 534 PDYVISAHDID-PYSRVKMQGVIQKYIDSSISSTVNLKE------DVTLETVADIYMTAY 586 Query: 723 KFGVK--TLYYQNTRDGAEDAQDDLVPSIQDD 752 K G+K T+Y + +R+G + D Sbjct: 587 KTGLKGITVYREGSREGILITEKPEKDKKSKD 618 >UniRef50_C4NT50 Putative ribonucleoside-diphosphate redutase n=2 Tax=unclassified N4-like viruses RepID=C4NT50_9CAUD Length = 776 Score = 494 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 124/648 (19%), Positives = 222/648 (34%), Gaps = 106/648 (16%) Query: 147 AVKQLEGKYLVQNRVTGEI-YESAQFLYILVAACL----FSNYPRETRLQYVKRFYDAVS 201 + + KY + G I ++ + +A + R RFY+A+ Sbjct: 11 SEQIWNQKYRFKTERDGFISDQNVVDTWGRIAQACSNLPHFHNNHAEREALEARFYNALY 70 Query: 202 TFKISLPTPIMSGVRTPTR-QFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAG 259 FK I SG T +C ++ DSLD I + Q GIG + Sbjct: 71 DFKFLPAGRINSGAGTGRNVTLFNCYVMGTIPDSLDGIFDMLKEAALTMQQGGGIGYDFS 130 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 +R G+ ++G E+F +G + F + + K+ G R GA H ++ + Sbjct: 131 TLRPKGALVKGVESFSSGPLTFMDVWDSMCKTIMSAGSRRGAMMATMRCDHPDIMEFVTA 190 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 K + R+R+ + V + D L Sbjct: 191 KQDP----LRLRNFNVSVLCTDEFMEAVAADSDWDLMF---------------------- 224 Query: 380 TKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLC 439 D Q +KA EL+ ++ + + +D N + + + +N C Sbjct: 225 ------DGKVYQTIKAKELWETILWNTYNYAEPGVIFIDRINKENNL-WFLETIAATNPC 277 Query: 440 LEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----------NLDELEELAILAVRA 488 E LP C L + NL ++ LEE VR Sbjct: 278 GEQPLPP------------YGACLLGSVNLAKHVVFPFVKGQAEIDMKALEESVRTGVRI 325 Query: 489 LDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQ 548 LD++++ +P+ A + A +R G+GV A L G RY + A N T I Sbjct: 326 LDSVVETSLFPLEAQRDEARFKRRQGLGVTGLADALFMTGHRYGNQQAVNFTDTIMMNIA 385 Query: 549 YYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKT 608 + + S ++AKE G P ++P++ +K + + + + E +++ I Sbjct: 386 IWAYEESIQMAKEMGPAPC---------LVPLEAREKFIQSGFMQRMP---EYIKDDILE 433 Query: 609 HGLRNSTLSALMPSETSSQISN-ATNGIEPPRGYVSIKAS------------------KD 649 G+RNS L ++ P+ T S + ++G EP + K Sbjct: 434 WGIRNSHLLSVAPTGTISMYAGNVSSGGEPIFAPKYQRKVTNDDGTKRTETVYDYAVLKF 493 Query: 650 GILRQVVPDYEHLHD---AYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPS 706 + E + ++ +D ++ + ++QK++D SIS N Sbjct: 494 EEHFGENDNPEAIWWWENYMATAQDLTPSD-HIVMQAVLQKWVDSSISKTVNLPE----- 547 Query: 707 GKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDD 752 + AY G K T Y N G+ + + + Sbjct: 548 -DISFDDFKAVYDHAYTTGCKGCTTYRPNDVTGSVLSVETKEEKPVET 594 >UniRef50_Q8SCK6 PHIKZ306 n=2 Tax=phiKZ-like viruses RepID=Q8SCK6_9CAUD Length = 779 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 244/778 (31%), Positives = 380/778 (48%), Gaps = 31/778 (3%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGL-HNVSISQVELRSHIQFYDGIKTSDIH 59 + + K DG+ E + KI+ +WAA+ L V S V + + D + ++ Sbjct: 16 LTMLKTIIKLDGTEEAYSPAKINGWGEWAAQHLGDKVDWSSVVMDAVQALGDKTSSQELQ 75 Query: 60 ETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHL 119 +I+ + ++R Y +A RL +LRKK YG P + +M + G Sbjct: 76 LQLIE---ECLNRKTWSYYLMAGRLYAIYLRKKFYGLNGIPTVKALQTRMRKDGIIVKL- 131 Query: 120 LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 DY+ +E+ Q++ IDHD D+ + ++ + GKY ++NR TG+ YE+AQF+Y+ +A Sbjct: 132 --DYSSKEYAQIEKIIDHDLDLLCPHFSLHHIRGKYALRNRKTGQEYETAQFVYMRMAMA 189 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINA 239 L P ETR+ +V+ +Y +S +S PTP + T R F+SC L GD+ S+ Sbjct: 190 LAEKEPAETRMTHVENYYKLLSNKILSAPTPNYVNLGTKLRGFASCCLFASGDNGVSLAM 249 Query: 240 TSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRG 299 AGIG+N R++G PIR G H G P+ AV++ Q G RG Sbjct: 250 GDYIANIMTQSSAGIGVNLMT-RSIGDPIRNGLIIHQGKKPYIDVIGKAVRANLQNG-RG 307 Query: 300 GAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYT-RLLKGEDITLFSP 358 GA T +Y + E + + L+N R E + R + Y NK K I +F+P Sbjct: 308 GAVTCYYSAFDPEADMITQLRNPRSTEDRKNRDLHYAFLSNKFFAKKAAQKDGMIFVFNP 367 Query: 359 SDVPGLYDAFFA-DQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417 P L+DAF++ D ++F +LY KYE D K V A +L M+ E TG IY + Sbjct: 368 FTAPDLHDAFYSGDIDKFIKLYEKYEADPKFEKTYVNARDLLKSMLVEAYETGTIYSAQI 427 Query: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND-------ENGEIALCTLSAFNLG 470 D N H+PF P+ SNLCLEIA PTKP + D GEIA C+L+A + Sbjct: 428 DELNHHTPFKE---PIYSSNLCLEIAEPTKPYYRMEDLYSSEDHGRGEIATCSLAAIAVD 484 Query: 471 AINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530 + + E A A++ +D + +Y P A R + G+G++ A ++A+ G + Sbjct: 485 NVPDKQTYEMAAYYALKMIDYCILNAEYAFPHLALTAKNRMSAGVGIMGLATHMARAGLK 544 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTI 590 YS + H E Y+L+KAS +++KE+G PW ++T + +G P TY K +DTI Sbjct: 545 YSSDAGKAEIHFIAERHMYFLIKASLKISKERGNAPWIHKTKWPEGWTPRKTYNKSVDTI 604 Query: 591 ANE--PLHYDWEALRESIKTH-GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS 647 Y W+ L + IK + G+ +S L+A MP E SS+ +TNG P R + K Sbjct: 605 IEGGFEELYPWDELEKEIKENGGIAHSVLAAYMPGEASSKALGSTNGPYPVRRLILNKTD 664 Query: 648 KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSG 707 + P + YE +++P D + I+QK+ DQ+ISA+ S Sbjct: 665 NGARVLWAAPYGDDDSYVYESAYDIPTKD-LIDCYAIIQKWTDQTISADLY--RRIVGSE 721 Query: 708 KVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQ----DDGCESGACKI 761 K+ ++L + K G+KT YY N A L +++ + GC G+C + Sbjct: 722 KISSNEMLGNHFYMVKRGMKTRYYVNLETAAGLDIKSLERAVEVTNTEVGCAGGSCTL 779 >UniRef50_B1HSG6 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillaceae RepID=B1HSG6_LYSSC Length = 697 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 139/675 (20%), Positives = 269/675 (39%), Gaps = 44/675 (6%) Query: 101 ALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR 160 + + + +V+ G Y+ ++ Y + K++ S+ + + Y +++R Sbjct: 47 DIEEKIRYLVDEGYYEKAFIDMYEMDFIKKLYKKAYDYNFRFPSFMSASKFYDSYAMKSR 106 Query: 161 VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP-T 219 EI E + +++A L +R +A+ TP Sbjct: 107 DGEEILEKYEDRIVIIALYLAQG-----NTVLAERSVEAMME-AYQPATPTALNSGKKAR 160 Query: 220 RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCI 279 + SC + DS++SI ++ G+G+N +R LG PI+ +G I Sbjct: 161 GELVSCFKLSMDDSMNSIAENIGYCLELSRLGGGVGVNLTDLRPLGDPIKEILNRASGVI 220 Query: 280 PFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQI 339 P K + + +Q G R G+ ++ ++H ++E+ + K + R+ + G+ I Sbjct: 221 PVAKLLENSFSYSNQLGQRNGSGVVYLNIFHADIENFISSKKPNADDKIRLATLSTGIII 280 Query: 340 NKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELF 399 + + + + +DI LFSP D+ +Y ++ E Y + + +R+ A L+ Sbjct: 281 PSIFFELMKRDKDIVLFSPYDIFKVYGKRMSEISISEMYYELLDNPKIRKIKRLNARRLY 340 Query: 400 SLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALP----TKPLNDVNDE 455 + + + + +G + D+ N P I V+ SNLC EI D +E Sbjct: 341 TEVKKAQFESGYPFEIFDDNVNDVHPLK-NIGRVKMSNLCTEILQVQETSVITDQDQPNE 399 Query: 456 NGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDY-PIPAAKRGAMGRRTLG 514 G C L + ++ A + +++ E L A+ L + +P+ + ++G Sbjct: 400 YGLDVSCNLGSIDIHAASKVNDFEALIDTAMHLLTNVSQMTHIKNVPSVAKANQLMHSVG 459 Query: 515 IGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNETTY 573 +G +N +L G Y + + + EA+ YY LK+S E+AKE+ F ++ Y Sbjct: 460 LGCMNLHGHLVTEGIMYGSKDSIHFMDRFMEAMNYYSLKSSMEMAKEKAETFYRFEDSDY 519 Query: 574 AKGILPIDTYKKDLDTIANEPLHYD----------WEALRESIKTHGLRNSTLSALMPSE 623 A GI K + ++ L W L++ + +GL +S A+ P+ Sbjct: 520 ASGIYFDQYVNKTEEELSPAVLKALGNIPIITSKMWGLLKQDVMQYGLFHSYRLAIAPTG 579 Query: 624 TSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY-EHLHDAYELLWEMPGNDGYLQLV 682 + S I + T I P V ++ D +P Y +++ D + L Sbjct: 580 SISYIRSCTASISPCTERVEVRDYADSRTIYPMPHLTNENSHLYVEAYDVDPYD-LIDLY 638 Query: 683 GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQ 742 QK +DQ IS + +QL K + A+ G+K++YY R + Sbjct: 639 AASQKHVDQGISMTLYV------TDNWTTEQLAKVYIYAWVKGIKSVYYVRQRLQSL--- 689 Query: 743 DDLVPSIQDDGCESG 757 + C + Sbjct: 690 ---------EECVAC 695 >UniRef50_Q8SCB8 Large subunit ribonucleotide reductase n=6 Tax=unclassified SPO1-like viruses RepID=Q8SCB8_9CAUD Length = 705 Score = 487 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 148/708 (20%), Positives = 284/708 (40%), Gaps = 56/708 (7%) Query: 78 QYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDH 137 A ++ K + V + + G YD + + + ++M Sbjct: 28 DKEALEEDSKYIEKNTRN---FDNEVERVRTLTKEGTYDK-VFDSIPDTIIEEMTKLAYS 83 Query: 138 DRDMTFSYAAVKQLEGKYL---VQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVK 194 S+ A ++ Y E + + A LF + + R ++ Sbjct: 84 FNFQFQSFMACQKFYESYAVTQYDKDDNPIFVEDYEQHNVREALYLFQDDYVKAREMLIQ 143 Query: 195 RFYDAVSTFKISLPTPIMSGVRT-PTRQFSSCVLIECGDS-LDSINATSSAIVKYVSQRA 252 + + TP+ + SSC L D ++SIN + ++ + Sbjct: 144 -----LMEQTLQPATPVYLNSGLGKRGELSSCYLFIVDDDTIESINFITDSVRQASKNAG 198 Query: 253 GIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLE 312 G ++ R+R G+ + G G IPF K+ + +V +QGG R G+A + ++H + Sbjct: 199 GCAVDLTRLRPRGTEVNGVPNASKGVIPFAKNIEQSVSYFNQGGKREGSAVCYLNIFHPD 258 Query: 313 VESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQ 372 + K + R+ + GV I L + + F+ DV Y F ++ Sbjct: 259 IHEFSSSKKINASDKVRLDTLSIGVTIPNKFMELLKEDKYYYTFNVYDVKQKYG-FTLNE 317 Query: 373 EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP 432 Y + DD IRK++ ++ + + + + +G Y+ +D+ N + P + Sbjct: 318 INMSEYYDIFVNDDDIRKEKYYTRDIMTDIARTQLESGYPYVFYIDNANDNHPLKK-LGK 376 Query: 433 VRQSNLCLEIALPTKPL------NDVNDENGEIALCTLSAFNLGAINNLDELEELAILAV 486 V+ SNLC E+ + ND G +CTL + NL + L+E + Sbjct: 377 VQMSNLCCEVTQLQEVSDIFPYLQSHNDTIGNDVVCTLGSLNLVNVVEKGLLKESVDSGI 436 Query: 487 RALDALLDYQDYP-IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFE 545 R+L + D + P +P+ ++ R +G+G +N+ LAK+ Y + ++ + F Sbjct: 437 RSLSKVTDLMNVPFLPSVQKANDELRAIGLGAMNWHGLLAKNMLSYGSRESLDIANSLFS 496 Query: 546 AIQYYLLKASNELAKEQG-ACPWFNETTYAKGIL----------PIDTYKKDLDTIANEP 594 AI+YY +K+S ELAKE G F E+ Y G + P K + P Sbjct: 497 AIRYYSIKSSMELAKETGKVFKGFKESEYYTGEVFSSYIQKSHEPRTKKAKKVLEKVYIP 556 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQ 654 DW +L + +K +G+ N L+ L P+++ S + NAT+ I P + + + Sbjct: 557 TEEDWNSLSKDVKEYGMYNGYLNNLAPTQSISYVQNATSSIMPVPSPIENRRYGNMDTYI 616 Query: 655 VVPDYEHLHDAY---ELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPM 711 +P + + E +++ + ++QK +DQ+IS ++P Sbjct: 617 PMPFMSPITQFFYESETAYKLDN-KRIINTSAVIQKHVDQAISTILYV------ESEIPT 669 Query: 712 QQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGAC 759 +L+ A++ G+K+LYY ++ +++ CES + Sbjct: 670 NKLVSLYYYAWEKGLKSLYYTRSQ------------TLKVIECESCSV 705 >UniRef50_Q120H3 Ribonucleotide reductase large subunit n=1 Tax=Polaromonas sp. JS666 RepID=Q120H3_POLSJ Length = 784 Score = 484 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 125/667 (18%), Positives = 228/667 (34%), Gaps = 104/667 (15%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKIS 206 A++QL L+ + S + + VA L + ++ R + Sbjct: 13 ALQQLCYDVLL-EKYAAPGESSVREIQERVATSLADDKAQQARFVSAQ-------AGGFV 64 Query: 207 LPTPIMSGVRTPT-RQFSSCVLIECGDSLDS--------INATSSAIVKYVSQRAGIGIN 257 I S +C + GDS+ I + + + G+G + Sbjct: 65 PGGRINSAAGMDRVSTMINCFVQPVGDSMSGSNQDGQPGIMDALRESAETMRRGGGVGYD 124 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 IR +G+ ++G ++ +G + + + F ++ G R GA + H ++E + Sbjct: 125 FSSIRPVGARVKGTDSKASGPVSYMRVFDRMCQTVESAGARRGAQMGVMRVDHPDIEMFI 184 Query: 318 VLKN-----NRGVEGNR------------------------VRHMDYGVQINKLMYTRLL 348 K G++ + + + V + ++ Sbjct: 185 DAKKTPDFSQMGLDKKDADGLLDLVRKNQGFGWSLRSAFATLSNFNISVAVTDEFMNAVV 244 Query: 349 KGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS--IRKQRVKAVELFSLMMQER 406 D L D E E TK D + VKA+E+++ +M+ Sbjct: 245 NDSDFDLVH-------------DAEPVEACPTKVCTDGKARFVYRTVKAIEIWTKIMRNT 291 Query: 407 ASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSA 466 + +D N + ++ +N C E LP + N + Sbjct: 292 YYGAEPGVLFIDRINQDNNLR-YCEVIKATNPCGEQTLPPYGCCCLGSPNLTRFVSN--P 348 Query: 467 FNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAK 526 F L A + D L ++ AV LD +LD +P+P A +R +G+G A +A Sbjct: 349 FTLMASFDFDGLSKVVAKAVEMLDKVLDKTHWPLPQQASEAANKRRIGLGHFGLADAMAM 408 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKD 586 G RY + E ++ AS LAK GA P+F+ Y + Sbjct: 409 LGIRYDSQQGADFAAHVSEVLRDSAYMASVNLAKTLGAFPFFDAEKYLE----------- 457 Query: 587 LDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISN--ATNGIEPPRGYVSI 644 E ++++I+ +G+RNS L ++ P+ T S A++GIEP Sbjct: 458 ----EGTFASRLPEKIKDAIRMYGIRNSHLLSIAPTGTISMAFGDNASSGIEPIFSLRQQ 513 Query: 645 KA--SKDGILRQVVPDYEHLH------------DAYELLWEMPGNDGYLQLVGIMQKFID 690 + DG + + D + +M D +L+++G + +ID Sbjct: 514 RNKMMADGSRQIFELEDYAYRQFKLSKGEDAKSDVFVTAMQMTVAD-HLRVLGAVAPYID 572 Query: 691 QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPS 748 +IS N P + + + A++ G+K T Y N GA D Sbjct: 573 SAISKTVNVP------ADYPFEDFQQVYMDAWRMGLKGITTYRPNDMIGAVLVSADDADK 626 Query: 749 IQDDGCE 755 E Sbjct: 627 KAAVATE 633 >UniRef50_Q3SMN2 Ribonucleoside-diphosphate reductase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMN2_THIDA Length = 600 Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 126/634 (19%), Positives = 218/634 (34%), Gaps = 85/634 (13%) Query: 145 YAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFK 204 + E +Y + + VA + + R + RFY + F+ Sbjct: 10 EISRHIWETRYRFAGEPD------IRASWQRVAQAVAQAEV-DARALWADRFYALLDDFR 62 Query: 205 ISLPTPIMSGVRTPTR-QFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR 262 I++G + R +C ++ E D ++ I + G+G + +R Sbjct: 63 FLPGGRILAGAGSGHRVTLFNCFVMGEIADDIEDIFEALKEGALTMQHGGGVGYDFSTLR 122 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 G+ + +G + F + + G R GA H ++E+ + K + Sbjct: 123 PAGTIAQATGTIASGPVSFMHIWDAMCATVLSTGARRGAMMATLRCDHPDIEAFVDAKRD 182 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTK- 381 V +RH + VQ++ + D L P L D AD R +T Sbjct: 183 PAV----LRHFNLSVQVSDAFIAAVDADADWPLVFP-----LRDGEPADGAVVRRHWTGS 233 Query: 382 YEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLE 441 + V+A L+ +++ T + VD N + + +N C E Sbjct: 234 TTAVPCRVLRTVRARALWQRILRAAYDTAEPGVLFVDTINRDNTL-AGRETLTTTNPCGE 292 Query: 442 IALPTKPLNDVNDENGEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDA 491 I LP C L + NL A +L L + A LAVR LD Sbjct: 293 IPLPA------------YGACDLGSLNLTAFVVAPFAADARLDLAALGDAAALAVRFLDD 340 Query: 492 LLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYL 551 ++D YP+ A R A +R +G+G+ A L G Y A L + ++ Sbjct: 341 VIDVSRYPLQAQAREARFKRRIGLGITGLADALVLLGLDYDSEPARQLAERAMRTVRDAA 400 Query: 552 LKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGL 611 +AS +LA+E+G P + + +R+ I G+ Sbjct: 401 YRASIDLAREKGGFPALERSAFLASGFAGRLPP----------------EIRDGIARDGI 444 Query: 612 RNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLW 670 RNS L A+ P+ T S ++N ++GIEP + + + D LLW Sbjct: 445 RNSHLLAIAPAGTISLLANNLSSGIEPIFAAEASRRILQ---PDGSYRSHAVSDYACLLW 501 Query: 671 EMP---------------GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLL 715 +L + +Q +D +IS N + + Sbjct: 502 RAHGGVGQPPALVEAQQLDPVAHLAMQAALQPAVDNAISKTINVA------ADIAFARFE 555 Query: 716 KDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVP 747 A+ G+K T++ N GA A+ + Sbjct: 556 ALYRQAHALGLKGCTVFRPNPVTGAILAEPESER 589 >UniRef50_Q21U31 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21U31_RHOFD Length = 589 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 128/613 (20%), Positives = 233/613 (38%), Gaps = 75/613 (12%) Query: 144 SYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTF 203 + + +YL + + + VA + P + +RF +S + Sbjct: 8 TAISEHVWRTRYLW-AEPGSVPEPAIENTWARVALAVSGAEPHHQN-DWRERFLAMLSDW 65 Query: 204 KISLPTPIMSGVRTPTR-QFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRI 261 + I++G T R +C+ + DS+ I ++ + IGI+ + Sbjct: 66 RFLPGGRILAGAGTSRRVTLFNCLAMGPIEDSVQGIFNALREAMQCLQAGGAIGIDFSTL 125 Query: 262 RALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKN 321 R + + A +G + F +Q A G R A H ++E+ + K Sbjct: 126 RPALALAQSSGAVASGPVSFMNVWQAANAVLEAGNRRRSAMLATLRCDHPDIEAFIDAKL 185 Query: 322 NRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTK 381 + G + H V +N L + L P + E ER+++ Sbjct: 186 DTG----ALSHFKLSVLLNDEFMQALQEDGPWPLVFPLGEHPI----PVGGEVCERVWSD 237 Query: 382 YEKDD-SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 + +RV A L+ ++Q + ++G + +D N + NL Sbjct: 238 GGPPQLCMVHRRVPARALWEKLLQAQHASGEPGVLFIDRINRAN------------NLWY 285 Query: 441 EIALPTKPLNDVNDENGEIALCTLSAFNLGAIN----------NLDELEELAILAVRALD 490 + L T D C L + NL +L L +A +A R LD Sbjct: 286 DEHL-TVANPDGGVPLPPWGACNLGSINLSRFVQQPFAAHPSVDLGGLRAVAAVATRFLD 344 Query: 491 ALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYY 550 + D +P+ A ++ A+ R +G+GV A LA G RY ++ +LT + AI+ Sbjct: 345 DVYDISLFPLKAQQKSALASRRIGLGVTGLADMLAMLGLRYGSAASIDLTREIMGAIRDT 404 Query: 551 LLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHG 610 + S ELA+E+GA P ++ Y ++ AL+++I HG Sbjct: 405 AYRTSVELAQEKGAFPACDKLKYGASPFVLEL----------------DRALQDAIAQHG 448 Query: 611 LRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKASKDGILRQVVPDYEH-------- 661 +RNS L A+ P+E+ S ++ N +NGIEP R + +++ + + V D E Sbjct: 449 IRNSHLLAVAPTESISLLANNVSNGIEPMRAFQAMRRVRGAEGQAVFFDVEDAACRQYQA 508 Query: 662 -------LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL 714 + ++ D LQL+ +Q +D ++S S +Q + Sbjct: 509 LHGPDAPWPKHFVQAADVSAEDQ-LQLMAAVQSHVDNALSKTVYLPAS------ASVQDV 561 Query: 715 LKDLLTAYKFGVK 727 L A++ G+K Sbjct: 562 GLVLQQAWELGLK 574 >UniRef50_C4RH87 Ribonucleoside-diphosphate reductase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RH87_9ACTO Length = 611 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 133/648 (20%), Positives = 217/648 (33%), Gaps = 135/648 (20%) Query: 159 NRVTGEIYESAQFLYILVAACLFSNYPRETRLQ-----YVKRFYDAVSTFKISLPTPIMS 213 ES L VA L + + + RF ++ + I++ Sbjct: 24 GPDGAVRIESVDDLLDRVATGLGAVEREYGADESTARVWAARFRALMAENRFWPSGRILN 83 Query: 214 GVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEA 273 T Q +SC ++ D L +I T G G + +R G+PI EA Sbjct: 84 NCGTRQGQLASCFVLPVEDDLGAIFDTLKLAASCHRTGGGTGFDLTPLRERGAPISTAEA 143 Query: 274 F-HTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRH 332 +G + + F QGG GA + H +V + K G R+ + Sbjct: 144 AGSSGPVSWLHLFDAETGVVMQGGKMRGANLASLSVRHPDVFEFIDAKAVVG----RLAN 199 Query: 333 MDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQR 392 + V ++ L+ G +I L SP ++R Sbjct: 200 FNLSVTVDDAFMRTLIDGGEIDLVSP--------------------------VGGRPRRR 233 Query: 393 VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDV 452 V A E++ + + TG + D N +P + P+R +N C E L + Sbjct: 234 VPAAEIWRRISAQAWRTGDPGLLFTDMINRANPLLDRLGPIRTTNPCGEQTLYPYEPST- 292 Query: 453 NDENGEIALCTLSAFNLGAIN------NLDELEELAILAVRALDALLDYQDYPIPAAKRG 506 L + NL A+ + LE AVR LD +D YP P Sbjct: 293 -----------LGSVNLRAMTGPDGRLDTARLERTVEDAVRLLDNSIDASHYPDPRITAM 341 Query: 507 AMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP 566 A G R LG+GV+ FA L G RY A + + I+ + LA E+G P Sbjct: 342 ARGNRRLGLGVMGFADLLIALGVRYDSTRALAVVDEVGGRIRAVAEATTRRLAAERGTFP 401 Query: 567 WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 F+ P +D +RN ++ + P+ T S Sbjct: 402 NFD------------------------PARFD----------APVRNCAVTTIAPTGTIS 427 Query: 627 QISNATNGIEPPRGYVSIKASK-DGILRQVVPD--------------------------- 658 ++ ++GIEP + K DG + V D Sbjct: 428 MVAGCSSGIEPRFAPIWRKNVLVDGGVSYVDEDLAADVCAHGGVDPEQARRLIRERPVTE 487 Query: 659 ---YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLL 715 E + D Y ++PG + ++++ Q+ ID ++S N + + Sbjct: 488 LPMPEPVRDRYRYAHDVPG-EWHVRIAAQWQRHIDNAVSKTVNLP------RDCSVDDVA 540 Query: 716 KDLLTAYKFGVK--TLYYQNTR-------DGAEDAQDDLVPSIQDDGC 754 + L +++ G K ++Y Q +R GA D P D G Sbjct: 541 EVLTASWRLGCKGVSVYRQGSREQDLQEVAGARTGTDRPTPLAGDAGT 588 >UniRef50_Q2N7C2 Ribonucleoside-diphosphate reductase n=90 Tax=root RepID=Q2N7C2_ERYLH Length = 681 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 147/661 (22%), Positives = 232/661 (35%), Gaps = 125/661 (18%) Query: 120 LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 ++D + ++ ID RD+ + + L +YL+ E Q L+ VA Sbjct: 72 VDDSKKVNDRRFTIEIDESRDVNLTEFGKETLIDRYLLPG-------EKFQDLFARVADA 124 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINA 239 ++ +R YD +S TP++S T SC L DSLD I Sbjct: 125 YA------DDQEHAQRLYDYISRLWFMPATPVLSNGGTNRGLPISCYLNSVSDSLDGIVG 178 Query: 240 TSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRG 299 T + V S+ GIG G +R +G P+ G +G IPF + + + SQG +R Sbjct: 179 TWNENVWLASKGGGIGTYWGNVRGIGEPV-GLNGKTSGIIPFVRVMDSLTLAISQGSLRR 237 Query: 300 GAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPS 359 G+A + + H E+E L ++ G + ++ +GV I + +G + L SP Sbjct: 238 GSAACYIDIHHPEIEEFLEIRKPSGDFNRKALNLHHGVLITDAFMEAVREGAEFDLKSPK 297 Query: 360 DVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDH 419 D + V A LF +++ R +TG YI D Sbjct: 298 D--------------------------GSVRGTVDARSLFQKLVETRLATGEPYIVFADT 331 Query: 420 CNTHSP--FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDE 477 N P V SNLC EI LPT + ND A+C LS+ NL + + Sbjct: 332 VNRMMPKHHRDLGLKVSTSNLCSEITLPTGVDHLGND---RTAVCCLSSLNLEKWDEWNG 388 Query: 478 LEELAILAVRALDAL----LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSD 533 ++ +R LD + +D + AK A R++G+GV+ F +L Sbjct: 389 EKDFIEDVMRFLDNVLQDYIDRAPDEMARAKYSASRERSVGMGVMGFHSFLQSKNLPLEG 448 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANE 593 A K F+ I +AS LAKE+G CP E + Sbjct: 449 PMAKAWNDKMFKQIHAKANEASMLLAKERGPCPDAEEMGAME------------------ 490 Query: 594 PLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKASKDGIL 652 R S A+ P+ + S I + IEP + + G Sbjct: 491 ------------------RFSCKMAIAPTASISIICGGTSACIEPIPANIYTHKTLSGSF 532 Query: 653 RQVVPDYE--------------------------------HLHDAYELLWEMPGNDGYLQ 680 P E ++ +E+ L+ Sbjct: 533 IVKNPYLEKLLKKKSKDSTAVWNSILERGGSVAHLDFLTPEEKAVFKTSFEID-QRYLLE 591 Query: 681 LVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED 740 +IDQ+ S N V L+ A++ G+K+LYY ++ Sbjct: 592 FAADRAPYIDQAQSLNLFIP------ADVDKWDLMMLHFQAWEKGIKSLYYLRSKSVQRA 645 Query: 741 A 741 Sbjct: 646 G 646 >UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPP8_9BACL Length = 574 Score = 464 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 141/461 (30%), Positives = 222/461 (48%), Gaps = 11/461 (2%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETI 62 + V KRDG E ++LDKI L E ++ Q DG++TS+I Sbjct: 37 KTFTVEKRDGRIEPLSLDKIFAFLRRGCEAAEGCDPERLAADVWPQLRDGMRTSEIARVA 96 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKA-----YGQFEPPALYDHVVKMVEMGKYDN 117 I+AA + S P +Q++AARL + K+A Y Y +V++ +G+Y Sbjct: 97 IQAAVEKTSVAEPGWQFVAARLLLLDAYKQASRNRGYRHLGYGDFYQLIVELERIGRYGT 156 Query: 118 HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 ++ E Y+E+E ++ +I +RD +Y +KQL +Y ++N G I E Q L++ V+ Sbjct: 157 YIREHYSEDEIAELAAYIKPERDHLLNYVGLKQLLDRYAIRNLDNG-IMELPQELFMGVS 215 Query: 178 ACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSI 237 L + ++ + KRFYD +ST + ++ TP +S R P Q SSC + D L SI Sbjct: 216 MHLAMKE--KDKVAWAKRFYDMLSTLQATVATPTLSNARKPFHQLSSCFIDMPEDDLVSI 273 Query: 238 NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV 297 AT A + G+GI G+IRA GS IR G +P+ ++F SC+Q G+ Sbjct: 274 YATDEAFARVSKFGGGMGIYVGKIRARGSAIRNHPGASGGVVPWIRNFNNTAVSCNQLGM 333 Query: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357 R GAA ++ +WH ++ L L+ N G E + + GV I L R+ + LF Sbjct: 334 RAGAAAVYLDVWHKDILDFLQLRTNNGDERMKAHDIFPGVCIPDLFMRRVEERGMWYLFC 393 Query: 358 PSDVPGLYDAFFAD--QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQ 415 P +V + D EEFER Y ++ ++ + + A+E+ +MQ TG +I Sbjct: 394 PYEVRKVMGFSLEDSWGEEFERRYEACVENPNLPRVEIPAIEIMKRIMQSAFETGTPFIF 453 Query: 416 NVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDEN 456 D N +P + V SNLC EI P + + Sbjct: 454 FRDTANRLNP-NKHAGMVYCSNLCTEIIQNMSPSRRIEETE 493 >UniRef50_B9KZV2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZV2_THERP Length = 589 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 117/637 (18%), Positives = 214/637 (33%), Gaps = 127/637 (19%) Query: 163 GEIYESAQFLYILVAACLFSNYPRETR----LQYVKRFYDAVSTFKISLPTPIMSGVRTP 218 G I E+ + L+ VA + + R + ++FY+ ++T + TP + T Sbjct: 24 GRIIETEEELFWRVARAVAAAEDAFPRGPRSAEIAEKFYELMTTLRFLPNTPALINAGTQ 83 Query: 219 TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 Q +C +I DSLD I K G G + +R G +R +G Sbjct: 84 LGQLFACFVIPVPDSLDGIFGAVRDAAKIQQTGGGTGFSFSHLRPRGDLVRSTRRPSSGA 143 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 + F + F A + VRGGA H +V + K N + ++ V Sbjct: 144 VSFIRIFDVASDVIATESVRGGANMAVLRCDHPDVREFIDAKRNPALFSR----FNFSVL 199 Query: 339 INKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVEL 398 + ++ +I L +P + + A EL Sbjct: 200 VTDDFLRAAIERREIALINPRT--------------------------GLPFAQANAGEL 233 Query: 399 FSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGE 458 F M+ G + D + PA+ P+ +N C E+ L Sbjct: 234 FDAMVDAAWEVGDPGLLFYDRIQRDNAV-PALGPLEATNPCGEVPLHPWE---------- 282 Query: 459 IALCTLSAFNLGAIN---------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMG 509 C L + NL A + L+E A LA+R LD +++ YP + Sbjct: 283 --ACVLGSLNLRAFIVERGDRAFLDEAGLQESARLALRFLDNMVEVSRYPKVEIETICRA 340 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 R +G+G++ FA L Y + + + +Q ++AS LA+E+G P F Sbjct: 341 NRKVGLGIMGFADLLLALRIPYGSDESVAVADRVMGLVQAAAVEASRRLAEERGPFPNFP 400 Query: 570 ETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS 629 + YA P RN+T++ + P+ + S I+ Sbjct: 401 ISRYAARGEP------------------------------PRRNATVTTVAPTGSISIIA 430 Query: 630 NATNGIEPPRGYVSIKASKD-------------------------------GILRQVVPD 658 ++GIEP + G + Sbjct: 431 GCSSGIEPLYALAYRHVGEFVGIVEPHPLLLRELSRIGKYDPALLHEIEVTGRIGHRTDL 490 Query: 659 YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDL 718 E L + + E+ + ++++ +Q+ ++ ++S N + + + Sbjct: 491 PEELRRLFRVATEIS-PEEHIRVQAAVQRHVENAVSKTINLPY------EATRDDVRRAF 543 Query: 719 LTAYKFGVK--TLYYQN-TRDGAEDAQDDLVPSIQDD 752 L A++ G K T+Y + R + + +D Sbjct: 544 LLAHELGCKGVTVYREGAPRGQVLQVLGHCLSCVGED 580 >UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=cellular organisms RepID=C1DPR2_AZOVD Length = 1338 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 133/517 (25%), Positives = 204/517 (39%), Gaps = 66/517 (12%) Query: 277 GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYG 336 G + T GG R GA + WHL++E L L+ N G + R M+ Sbjct: 807 GDESYM----TTSGLAHNGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTA 862 Query: 337 VQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIR-KQRVKA 395 I L R+ + TLFSPSDV L+D EE Y + I+ + + A Sbjct: 863 NWIPDLFMKRVFEDGQWTLFSPSDVRDLHDLTGRAFEERYEYYEALTQYGKIKLFKTIAA 922 Query: 396 VELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDE 455 +L+ M+ TG ++ D CN SP + V SNLC EI L T Sbjct: 923 KDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQ-HVGVVHSSNLCTEITLNTSDS------ 975 Query: 456 NGEIALCTLSAFNLGAIN-----NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGR 510 EIA+C L + NL + ++L AVR LD ++D Y + A+ Sbjct: 976 --EIAVCNLGSINLVNHINDGRLDTEKLSRTVKTAVRMLDNVIDINYYSVDTARNANFRH 1033 Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNE 570 R +G+G++ F L Y +A ++ EAI YY ++AS +LA+E+GA F Sbjct: 1034 RPVGLGIMGFQDALYLQHIAYGSEAAIAFADRSMEAISYYAIQASCDLAEERGAYSSFEG 1093 Query: 571 TTYAKGILPIDTYKKDLDTIA------NEPLHYDWEALRESIKTHGLRNSTLSALMPSET 624 + +++GILP+D+ + + DW LRE +K G+RNS + A+ P+ T Sbjct: 1094 SLWSRGILPLDSLDILAEQRGTKYIEVDRSSTLDWAPLRERVKK-GMRNSNIMAIAPTAT 1152 Query: 625 SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEH----------------------- 661 S I + IEP + +K++ G + P H Sbjct: 1153 ISNIVGVSQSIEPTYQNLYVKSNLSGEFTVINPYLVHDLKARELWDGVMVNDLKYYDGSV 1212 Query: 662 ---------LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQ 712 L Y +E+ ++ QK+IDQ+ S N + V Sbjct: 1213 QQIERIPTDLKALYATAFEVET-KWIVEAASRRQKWIDQAQSLNLYIAGASGKKLDVT-- 1269 Query: 713 QLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSI 749 A+ G+KT YY + + Sbjct: 1270 -----YRMAWFRGLKTTYYLRALAATSAEKSTINTGK 1301 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 77/303 (25%), Positives = 131/303 (43%), Gaps = 15/303 (4%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHET 61 + ++ V + DG +++ ++ ++ A EGL V + ++ + YDG+ D++ Sbjct: 145 HPSIRVARADGVLVPLDMGRLDTIIGEACEGLAEVDAALIQKETLKNLYDGVAEKDVNTA 204 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAYG---------QFEPPALYDH-VVKMVE 111 ++ A L+ R+ P+Y Y+ ARL + LR +A G E LY + VE Sbjct: 205 LVMTARTLVERE-PNYSYVTARLLMDTLRAEALGFLGVAESATHHEMADLYARALPVYVE 263 Query: 112 MGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQF 171 G L E + ++ +DH+RD F+Y ++ L +Y + G +E Q Sbjct: 264 KGIEFELLDPKLREFDLVRLGAALDHERDQQFTYLGLQTLYDRYFLHK--DGIRFELPQV 321 Query: 172 LYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG 231 ++ VA L P++ + FY+ +S+F TP + T Q SSC L Sbjct: 322 FFMRVAMGLAIEEPQKE--ERAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVP 379 Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS 291 D L I G+G + +RALGS I+G G +PF K + Sbjct: 380 DDLSGIYNAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVA 439 Query: 292 CSQ 294 +Q Sbjct: 440 VNQ 442 >UniRef50_A4VFR5 Ribonucleoside-diphosphate reductase n=32 Tax=Proteobacteria RepID=A4VFR5_PSEU5 Length = 745 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 130/663 (19%), Positives = 218/663 (32%), Gaps = 97/663 (14%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVST 202 A+ KY + ++ I ++ + VA L P + R + +RF A+ Sbjct: 49 LQAASEDIWSQKYRLSSKDGTPIDQTVDDTWQRVARALADVEPAKQREHWYERFLWALRN 108 Query: 203 FKISLPTPIMSGVR----TPTRQFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGIN 257 I I+S P +C + DS+D I + GIG Sbjct: 109 GAI-PAGRIISNAGAQDYKPATSTINCTVSGSITDSMDDILGKVHEAGLTLKAGCGIGYE 167 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 +R GS + G A +G + F F + S G R GA + + H +V + Sbjct: 168 FSTLRPRGSFVSGAGAHTSGPLSFMDIFDKMCFTVSSAGGRRGAQMGTFDVGHPDVREFI 227 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFAD-----Q 372 K G R+R + + I + + L P + AD Sbjct: 228 RAKREDG----RLRQFNLSLLITDEFMQTVEADGEWPLIFPVHAKEAAELDLADDAQVIW 283 Query: 373 EEFERLYTKYEKDDSIR----KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 E+ +DD + RVKA L+ ++M +D N + + Sbjct: 284 REWPVHDGYIVRDDGLVACKIYGRVKARHLWDMIMVSTYDYAEPGFILIDRVNQLNN-NW 342 Query: 429 AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDEL 478 +R +N C E LP C L + NL + D+ Sbjct: 343 WCEAIRATNPCGEQPLPP------------YGSCLLGSINLTHFVIDPFGVEARFDWDKY 390 Query: 479 EELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 E+ + R LD +++ P+ + +R G+G + L RY A Sbjct: 391 REVVRVFTRMLDNVVEINGLPLEQQRHEIESKRRHGMGFLGLGSTLTLLKLRYGSPEACV 450 Query: 539 LTHKTFEAIQYYLLKASNELAKEQGACP----WFNETTY---AKGILPIDTYKKDLDTIA 591 T + + + + EL+KE+G P F T + + D YK D IA Sbjct: 451 FTEEVSREMALVGWEQALELSKEKGPAPLLSQNFEVTAEMLRKRPEMAKDGYKVG-DQIA 509 Query: 592 NEPLHYDWEALRESIKTH-----------GLRNSTLSALMPSETSSQ--ISNATNGIEPP 638 LH + + I + G R + S++ P+ T S +NA+NGIEP Sbjct: 510 GRVLHAKYSRYMQKIAEYAPDLIEALAEQGARFTHHSSIAPTGTISLSLANNASNGIEPS 569 Query: 639 RGYVSIKA-SKDGIL------------------------RQVVPDYEHLHDAYELLWEMP 673 + + + G E L D + ++ Sbjct: 570 FAHHYSRNLIRPGRKAKEKIEVFSYELLAYRTLINARAKPGSDEPGEKLPDYFITADDVS 629 Query: 674 GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYY 731 ++ + QK++D SIS N P + A++ G+K T + Sbjct: 630 -PTQHVDIQAAAQKWVDSSISKTANVPT------DYPFEAFKDIYRYAWRQGLKGCTTFR 682 Query: 732 QNT 734 N Sbjct: 683 FNP 685 >UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=6 Tax=Clostridium difficile RepID=Q18BC3_CLOD6 Length = 729 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 132/774 (17%), Positives = 255/774 (32%), Gaps = 174/774 (22%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDG-------IKTSDI 58 + KRDG+ E + KI + A+ ++ + + + +I Sbjct: 3 YIIKRDGTKELFSKSKIEDAVYKASINSEGGVDRELAYDISRKIANDYNSMEKCLSVEEI 62 Query: 59 HETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNH 118 + + L + RK + LY + + Sbjct: 63 QDIVEV-------------------LLMESNRKDIAKHY---ILYRERRSEIRTKAW--- 97 Query: 119 LLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 EF ++ I + KY ES ++ Sbjct: 98 --------EFDELQKSI---------------WKNKYRHNG-------ESFDEWIKRISN 127 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR----QFSSCVLIECG-DS 233 R + + I++ +S+C +IE DS Sbjct: 128 NSS-------------RISKLIRQKRFLFAGRILANRGLQKEGKKVTYSNCYVIEPPKDS 174 Query: 234 LDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCS 293 ++ I T+ + + S G+GI+ ++R G+ + TG + F + + Sbjct: 175 IEDIFDTAKKLARTFSYGGGVGIDISKLRPKGAKVNNAAKHTTGAVSFMELYSMTTGLIG 234 Query: 294 QGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDI 353 Q G R GA + + H E+E + +K + +V + V++ + + Sbjct: 235 QRG-RRGALMISMDVNHPEIEDFIDIKT----DLEKVTKANISVRVTDEFMQAVRE---- 285 Query: 354 TLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIY 413 LY+ F + E + V A +LF+ ++ Sbjct: 286 --------KKLYNCTF-----------EVETTGEKIVKIVNAYDLFNKFVKNNWDYAEPG 326 Query: 414 IQNVDHCNTHSPF-DPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI 472 I D T++ + N C E LP+ C L + NL Sbjct: 327 ILFWDKIKTYNFMSEDKNFCFSGVNPCAEEPLPSG------------GSCLLGSINLSEF 374 Query: 473 ----------NNLDELEELAILAVRALDALLD--YQDYPIPAAKRGAMGRRTLGIGVINF 520 ++++L+ AV AL+ +LD +P+ + R +G+GV+ Sbjct: 375 IIQPFGEHATFDINKLKSCVREAVVALNDVLDEGLNLHPLQEQRDSVHKYRQIGLGVMGI 434 Query: 521 AYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPI 580 A L K G RY + L + + +K S +AKE G + +K I Sbjct: 435 ADMLIKMGIRYGSDESLELCDLIGKTMLNEAVKQSALIAKEYGTFSEYKYENISKSKFFI 494 Query: 581 DTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRG 640 + +D +E +K +GLRNS L + P+ + S + + GIEP Sbjct: 495 ENLNEDT---------------KEMVKKYGLRNSQLLTIPPTGSISTMIGISGGIEPIFN 539 Query: 641 YVSIKAS-----------------KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVG 683 I+ + K+ + ++ + D E L D + + G + + + Sbjct: 540 LSYIRKTESLHDEDVYYKVYTPIVKEYMDKKGITDEECLPDFFVTAMNI-GYEERINMQK 598 Query: 684 IMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTR 735 + QK+ID SIS+ N + ++ + + A++ G+K T++ + Sbjct: 599 VWQKYIDASISSTINIPF------ETTVEDVFNIYIKAWEAGLKGVTIFRDGCK 646 >UniRef50_D2EFV5 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFV5_9EURY Length = 756 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 117/649 (18%), Positives = 225/649 (34%), Gaps = 114/649 (17%) Query: 140 DMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDA 199 + KY + + ++ ++ ++ L S + + FY Sbjct: 11 FFDNDELRSRIFYEKYSLSDLEGNRTEKTPIEMWKRISRELASVEKDDKKKDIENNFYRL 70 Query: 200 VSTFKISLPTPIMSGVRTPTR-QFSSCVLIECG-DSLDSINATSSAIVKYVSQRAGIGIN 257 + FK I+ G + +C + DSL++I+ T+ + + S G+GI+ Sbjct: 71 LEDFKFVPGGRILFGAGANHKATLLNCHHLPITKDSLEAIHDTAKEMARTYSYGGGVGID 130 Query: 258 AGRIRALGSPIRGGEAFHTGC---------IPFYKHFQTAVKSCSQGGVRGGAATLFYPM 308 +R S +G + F K + Q G R GA + + Sbjct: 131 ISIVRPERS--------SSGIMQQDFRLASVSFMKLYSITTGIIGQTG-RRGAWMITLDV 181 Query: 309 WHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF 368 H ++ES + +K + VR+ + V++ + + TL ++ Sbjct: 182 THPDIESFVTIKK----DKKSVRYANISVKVYDDFMDAVENDKIFTLHFKNEKVEF---- 233 Query: 369 FADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD- 427 K+ +KA++L+ + +TG I D + SP + Sbjct: 234 ---------------------KKEIKALDLWKKRIDTAVNTGDPGIMFWDRMKSESPTEY 272 Query: 428 PAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN----------NLDE 477 ++ +N C E L C L A NL + + Sbjct: 273 DEKMAIKGTNPCSEQPL------------ENYGACDLGAINLDYFVKNQCTDKAEVDWEN 320 Query: 478 LEELAILAVRALDALLDY--QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGS 535 L++ VR LD +LDY + + + R +G+G++ A L RY Sbjct: 321 LDKTVRYGVRFLDNVLDYSYNRHALKEQADETVYARRIGLGIMGLANMLISMNLRYDSDK 380 Query: 536 ANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPL 595 A + I+ S+ LA E+G+ P F + + + Sbjct: 381 AIEFVDSLMKKIKETAYDESSNLAVEKGSFPAFVAEKHLQ----------------RNFV 424 Query: 596 HYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK---DGIL 652 + L + I +GLRN+ + + P+ + S ++ + GIEP + S+ +G Sbjct: 425 KRLDKKLLDKISKNGLRNACILTVAPTGSISSMAGVSGGIEPICALSYTRRSESLSEGKF 484 Query: 653 RQVVPDYEH------------LHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYD 700 + P + L + + ++ +++ +QK ID SIS+ N Sbjct: 485 EVLDPFVKRYMDKFKIRDKSTLPELFVTAHKID-PFFRVKMQATIQKHIDSSISSTVNL- 542 Query: 701 PSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVP 747 S + + K A+K G K T+Y + ++D A D+ Sbjct: 543 -----SADTDAETVDKIYRYAWKLGCKSITVYREGSKDDILKATDEKPA 586 >UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hydrogenothermaceae RepID=C1DWR9_SULAA Length = 1222 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 128/571 (22%), Positives = 228/571 (39%), Gaps = 91/571 (15%) Query: 223 SSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFY 282 +C + DSL+SI + G+G + RIRA GS I A +G IPF Sbjct: 643 HNCYVNVIDDSLESIMDKAKETAFLAKYAGGVGTDVTRIRATGSKIHSLNAKSSGIIPFI 702 Query: 283 KHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKL 342 K F T V + QGG R + ++ WHL+VE+ L L+ G R ++ + + Sbjct: 703 KIFDTIVNAIQQGGRRRSSQVMYLQPWHLDVEAFLDLRETTGNPYFRTPSLNTALWMPDE 762 Query: 343 MYTRLLKGEDITLFSPSDVPGLYDAFFADQE-EFERLYTKYEKDDSIRKQRVKAVELFSL 401 + R+ +GE I LF P++ P L A+ + + E+E K EK + +++ + + + Sbjct: 763 LMRRIKEGEPIYLFDPAECPKLVTAWGEEFKKEYESCIEKAEKGELKLWKKIDSRDFYKK 822 Query: 402 MMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIAL 461 + + A TG ++ D N +P P + + SNLC EI++P P + A+ Sbjct: 823 YLFKLAKTGHPWLTFKDRHNEKNPC-PQYSVINSSNLCTEISIPNSPES--------TAV 873 Query: 462 CTLSAFNLGAI-------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLG 514 CTL++ NL + D+L++ V ALD +LD YP +++ M R +G Sbjct: 874 CTLASVNLARHVKEDKSDFDWDKLKDTLETMVVALDNILDKNFYPSEESRKNTMDLRPIG 933 Query: 515 IGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYA 574 IGV+ F L K G Y A K + ++ S ELAKE+GA P + Sbjct: 934 IGVMGFHEALIKLGIPYDSDKAVETARKIAKFMREVTYAKSEELAKERGAFPHY------ 987 Query: 575 KGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNG 634 Y+ + + RN+ L A+ P+ + S I+ ++ Sbjct: 988 --------YEANYNYPPR-------------------RNAVLLAVAPTASISIIAGTSSS 1020 Query: 635 IEPPRGYVSIKASKDGILRQVVPDYEHL-------------------------------- 662 I+ + + + G + Sbjct: 1021 IDNYFSNIFSRDTLSGKFIVINKPLMKELEEKGLWSEELAEKIKAHQGSIQYIEELDGKI 1080 Query: 663 -HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTA 721 Y+ +E+ + + Q++IDQ++S + + ++ + A Sbjct: 1081 DKSLYKTAYEVSPYRQ-IDIAAAFQEYIDQAVSKSLYIEEDL-------RDKMEDIYMYA 1132 Query: 722 YKFGVKTLYYQNTRDGAEDAQDDLVPSIQDD 752 ++ G+K+ YY + + L + + + Sbjct: 1133 WEKGLKSTYYCFIDKTVKGEKYTLNVNKRGE 1163 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 100/228 (43%), Gaps = 18/228 (7%) Query: 3 QNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVS----ISQVELRSHIQFYDGIKTSDI 58 +V KRDGS E+ + K+ + EGL + +V ++ + + T ++ Sbjct: 1 MQRIVVKRDGSVEKFQMKKLVDAIFALLEGLELPDDYEIVFKVAKELDLKIPEKVTTEEL 60 Query: 59 HETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNH 118 ++KA LI ++ Y LA R + + ++ +F + D++ VE Sbjct: 61 DYLVLKAIEHLIPKNYI-YDTLATRQLLKIINRRIDRRFN--SFKDYINYAVEEKLLKPE 117 Query: 119 LLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 LL+ + +++ ID+ RD Y + L+ +YL+++R E E Q+ ++ VA Sbjct: 118 LLQ----FDIDRLEKSIDYSRDYNLDYFGLSTLKDRYLMKDRDF-ETIEKPQWFFMRVAM 172 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCV 226 + + + + Y+ +S + TP + T T Q+SSC Sbjct: 173 GIGNTEDE------IIKIYNKLSNLEYLHSTPTLFNSGTLTNQYSSCF 214 >UniRef50_Q8V6N4 Ribonucleotide reductase n=2 Tax=Haloviruses RepID=Q8V6N4_9VIRU Length = 805 Score = 450 bits (1158), Expect = e-125, Method: Composition-based stats. Identities = 128/736 (17%), Positives = 221/736 (30%), Gaps = 170/736 (23%) Query: 142 TFSYAAVK-QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAV 200 + A+ L +Y ++ G I E A L+ VA + + F + Sbjct: 31 RLTDNALHGILPARYFRKD-SEGNIIEGADDLFRRVAENVAGAEEDGDFDTWADEFEHQM 89 Query: 201 STFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGR 260 T + +P + T Q S+C +IE D ++ I T+ G+G Sbjct: 90 KTLRFMPNSPTLMNAGTDMNQLSACFVIEPRDDMEDIFETAQQAALIFQSGGGVGYAFSH 149 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 +R G+ I +G + F + F QGG R GA H ++ +V K Sbjct: 150 LRPKGAFINSTGGEASGPVSFMRVFDETCNQVKQGGKRRGAQMGILRADHPDIGRFIVAK 209 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS-------PSDVPGLYDAFFA--- 370 N G + + V + E TL+ P V L F++ Sbjct: 210 RNEGE----FANFNISVATTDNFIEAVDAQESYTLYDPETDYEEPYTVRELSAHFYSPEY 265 Query: 371 ---------------DQEEFERLY----------------TKYEKDDSIRKQ-----RVK 394 +E R Y K+E + +R + + Sbjct: 266 QDNPRDAFDDGEGAVVEENLWRDYADEIECELYGERVTLREKWEGHEGLRLEVGEPMELP 325 Query: 395 AVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP---VRQSNLCLEIALPTKPLND 451 A ++ +M+ G + N + N FD P + +N C E L Sbjct: 326 AAFIWDVMIDGAWRNGEPGLFNFEESNRQHSFDVEEYPEFRMNATNPCAEQML------- 378 Query: 452 VNDENGEIALCTLSAFNLGAI-------------------------------------NN 474 E C L NL + + Sbjct: 379 -----VEYEACNLGHINLSLMLSEDAPTYDEFLSDKLEDVASGDLSTREAVEWYFETAVD 433 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 +EL+ R LD ++ D+PIP G R +G+G++ FA L + G Y Sbjct: 434 FNELDRTIEAGTRFLDNVVTQSDFPIPEITERVGGMRKIGLGIMGFAQMLYQMGVPYGTQ 493 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP 594 + + I AS+ LA E+GA +++++ YA + + Sbjct: 494 DSYEVARCVMRYIDRRGTWASHRLALERGAFSYWDKSKYADPTEYDEWFAARTGLDP--- 550 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKA-------- 646 DW +RN ++ + P+ T+S I N T G EP + K Sbjct: 551 --EDWAG------GFPIRNHNITTIAPTGTTSMIGNTTGGCEPAYNVANFKNVSEDIQGD 602 Query: 647 -------------------------------SKDGILRQVVP--DYEHLHDAYELLWEMP 673 ++ V + + + + ++ Sbjct: 603 DLLVEFDDYFLRTLEENDLDVDAVKEEAETLMRNNEFDGVNDLSIPDEIAEIFVTTQDLS 662 Query: 674 GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFG-----VK- 727 + + + Q+F D IS N + + A G +K Sbjct: 663 S-EQHGLMQRAFQEFCDSGISKTVNLP------NEATHDDVADAYQLALDEGRRGAVIKG 715 Query: 728 -TLYYQNTRDGAEDAQ 742 T+Y +RD Sbjct: 716 LTVYRDGSRDQQVLTT 731 >UniRef50_P09853 Ribonucleoside-diphosphate reductase large subunit n=10 Tax=Alphaherpesvirinae RepID=RIR1_HHV23 Length = 1144 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 156/796 (19%), Positives = 271/796 (34%), Gaps = 107/796 (13%) Query: 26 LDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLA 85 + L V + + ++ L+ R A Y+ L + Sbjct: 389 MRRLCLDLPPVPPNAYT---PYHLREYAT------RLVNGFKPLVRRSARLYRILGILVH 439 Query: 86 IFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSY 145 + ++A + + + + ++ + D I H T Sbjct: 440 LRIRTREASFEEWMRSKEVDLDFGLTERLREHEAQLMILAQALNPYDCLI-HSTPNTLVE 498 Query: 146 AAVK---QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETR----------LQY 192 ++ + E YL + G ES +Y +A L R R + Sbjct: 499 RGLQSALKYEEFYLKR--FGGHYMESVFQMYTRIAGFLACRATRGMRHIALGRQGSWWEM 556 Query: 193 VKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLD--SINATSSAIVKYVSQ 250 K F+ + +I TP M + T SSC L+ + + ++ A + + +++ Sbjct: 557 FKFFFHRLYDHQIVPSTPAMLNLGTRNYYTSSCYLVNPQATTNQATLRAITGNVSAILAR 616 Query: 251 RAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWH 310 GIG+ + +P K + V + ++ R A ++ WH Sbjct: 617 NGGIGLCMQAFNDA------SPGTAS-IMPALKVLDSLVAAHNKQSTRPTGACVYLEPWH 669 Query: 311 LEVESLLVLKNN-RGVEGNRVRHMDYGVQINKLMYTRL------LKGEDITLFSPSDVPG 363 +V ++L +K G E R ++ + + L + RL K +LF Sbjct: 670 SDVRAVLRMKGVLAGEEAQRCDNIFSALWMPDLFFKRLIRHLDGEKNVTWSLFDRDTSMS 729 Query: 364 LYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTH 423 L D EEFE+LY E + + +L +++ A+TG +I D N H Sbjct: 730 LADF---HGEEFEKLYEHLEAMGFG--ETIPIQDLAYAIVRSAATTGSPFIMFKDAVNRH 784 Query: 424 SPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NNLDEL 478 +D A + SNLC EI P+ + +C L + NL + L Sbjct: 785 YIYDTQGAAIAGSNLCTEIVHPSSKRSS--------GVCNLGSVNLARCVSRRTFDFGML 836 Query: 479 EELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 + V ++ ++D P P RG R++GIG+ K G + Sbjct: 837 RDAVQACVLMVNIMIDSTLQPTPQCARGHDNLRSMGIGMQGLHTACLKMGLDLESAEFRD 896 Query: 539 LTHKTFEAIQYYLLKASNELAKEQG--ACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 L E + +K SN L +G F + Y G + + E Sbjct: 897 LNTHIAEVMLLAAMKTSNALC-VRGARPFSHFKRSMYRAGRFHWERFSNASPRYEGE--- 952 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV 656 WE LR+S+ HGLRNS ALMP+ S+QIS+ + G P + K ++DG + Sbjct: 953 --WEMLRQSMMKHGLRNSQFIALMPTAASAQISDVSEGFAPLFTNLFSKVTRDGETLRPN 1010 Query: 657 P------------------------------------DYEHLHDAYELLWEMPGNDGYLQ 680 D H ++ ++ + + Sbjct: 1011 TLLLKELERTFGGKRLLDAMDGLEAKQWSVAQALPCLDPAHPLRRFKTAFDYD-QELLID 1069 Query: 681 LVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAE 739 L ++D S S + G +P L++ L+ AYK G+KT +YY R Sbjct: 1070 LCADRAPYVDHSQSMTLYV--TEKADGTLPASTLVRLLVHAYKRGLKTGMYYCKVRKATN 1127 Query: 740 DAQDDLVPSIQDDGCE 755 +I C Sbjct: 1128 SGVFAGDDNIVCTSCA 1143 >UniRef50_A9J500 Putative uncharacterized protein gp07 n=2 Tax=unclassified Siphoviridae RepID=A9J500_9CAUD Length = 580 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 118/640 (18%), Positives = 211/640 (32%), Gaps = 121/640 (18%) Query: 173 YILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVR-TPTRQFSSCVLI-EC 230 +AA L + Q+ F DA+ + I S + T +C + Sbjct: 1 MNRIAAAL------KDDDQHFADFRDALLGMRFLPAGRIQSAMGSTRQVTPYNCYVSGTI 54 Query: 231 GDSL----DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ 286 DS SI ++ + GIG + +R G IR ++ +G I F F Sbjct: 55 NDSFVDGEGSIMVRAAEAAATMRMGGGIGYDFSTLRPRGDLIRKLQSHSSGPISFMHIFD 114 Query: 287 TAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGV--------------------- 325 K + G R GA + H ++E + K Sbjct: 115 AICKCVASSGHRRGAQMGVMRVDHPDIEEFIHAKQPGKDVQPLWDLVAELPEGAQKQQLI 174 Query: 326 ----EGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTK 381 + ++ + V I + GE L Sbjct: 175 MSLQQTLKLTGFNVSVAITDKFMECVASGEPFPLTF------------------------ 210 Query: 382 YEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLE 441 + + V A L+ +M+ + +D N + + +N C E Sbjct: 211 ----EGRTYREVDARALWDAIMRGTWDWAEPGVLFIDAINRMNNL-WYCETIAATNPCGE 265 Query: 442 IALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVRALDA 491 LP C L +FNL + D+ E VRA+D Sbjct: 266 QPLPP------------YGACLLGSFNLVKYIYKDGAGCFAFDWDQYREDIPQVVRAMDN 313 Query: 492 LLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYL 551 ++D YP+P K+ A +R +G+G+ A G Y + + + ++ Sbjct: 314 VVDRAIYPLPQQKQEAKDKRRMGLGITGLANAAEALGHEYGSPAFLAFEAEVLDTLRDES 373 Query: 552 LKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGL 611 AS +AK +G+ P F++ Y +G E +R++I +G+ Sbjct: 374 YLASAHIAKVKGSFPKFDKDKYLQGQFIKTLR----------------EDVRDAIAKYGI 417 Query: 612 RNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAY---- 666 RNS L+++ P+ T S + N ++GIEP Y + + +V ++ + Sbjct: 418 RNSHLTSIAPTGTISLCADNVSSGIEPVFAYSFDRTVIEFSGPRVETVEDYGARVFGVRG 477 Query: 667 ELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGV 726 + + + L Q+ +D ++S N + + ++A++ G Sbjct: 478 KTCSRVTVQEHVAALTVAAQR-VDSAVSKTCNVP------SDISWEDFKNVYVSAWEGGA 530 Query: 727 K--TLYYQ-NTRDGAEDAQDDLVPSIQDDGCESGA--CKI 761 K T + R G +DD D E A C+I Sbjct: 531 KGCTTFRLGGKRSGILVVKDDGGEPEADAPAEEPASQCRI 570 >UniRef50_Q5DN91 Ribonucleotide reductase n=1 Tax=Phage phiJL001 RepID=Q5DN91_9CAUD Length = 602 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 117/623 (18%), Positives = 216/623 (34%), Gaps = 112/623 (17%) Query: 167 ESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVR-TPTRQFSSC 225 ES + VA L ++ K + + + + + + T +C Sbjct: 45 ESFREGMGRVANALKDGE------EHYKELREILLDMRFMPAGRVQAAMGSTKNVTAYNC 98 Query: 226 VLI-ECGDSL----DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIP 280 + DS SI + + GIG + +R G+ I+ ++ +G + Sbjct: 99 YVSGTIEDSFIDGHGSIMERAKQAAATMRMGGGIGYDFSTLRPNGALIKKLQSRSSGPLS 158 Query: 281 FYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQIN 340 F + + + K + G R GA + H ++E + K+N + + + I Sbjct: 159 FMQIYDSVCKCVASSGHRRGAQMGVLRVDHPDIEEFIRAKHNEDN----LTGFNTSIAIT 214 Query: 341 KLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFS 400 ++ GE L + + A L+ Sbjct: 215 DRFMECVISGEPFPLTF----------------------------GGETYRSINAENLWE 246 Query: 401 LMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIA 460 ++M+ +D N + + +N C E LP Sbjct: 247 MIMRSTWDWAEPGTLFIDQINRMNNLK-YCETIAATNPCGEQPLPP------------YG 293 Query: 461 LCTLSAFNLGAI------------------NNLDELEELAILAVRALDALLDYQDYPIPA 502 C L +FNL + D VRA+D ++D YP+ Sbjct: 294 ACLLGSFNLVKYVKPFTGRVFVVGADSRWTFDWDLFATDVYAVVRAMDNVVDRAIYPLFE 353 Query: 503 AKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQ 562 ++ A +R +G+GV A G Y + E + +AS ELA+E+ Sbjct: 354 QEKEAKSKRRMGLGVTALANAAEALGMPYGSIEFLKFEGQVLETLACNSYQASVELAQEK 413 Query: 563 GACPWFNE----TTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSA 618 GA P ++E + Y + +LP E L+E I +G+RNS L++ Sbjct: 414 GAFPLYDERYLDSEYVRQVLP--------------------EELQEDIGRYGIRNSHLTS 453 Query: 619 LMPSETSSQIS-NATNGIEPPRGYVSIKA--SKDGILRQVVPDYE-HLHDAYELLWEMPG 674 + P+ T S + N ++GIEP Y + DG+ + V DY + + Sbjct: 454 IAPTGTISLTADNVSSGIEPVFSYGYDRTVHMPDGVRTERVDDYGVRVFGVEGKTSDQVT 513 Query: 675 NDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYK---FGVKTLYY 731 + ++ ++ + Q F+D ++S N P +P + + A++ G T Sbjct: 514 AEEHVDVLTVAQGFVDSAVSKTCNVAP------DMPWEDFKQIYFRAWEGGAKGCTTFNS 567 Query: 732 QNTRDGAEDAQDDLVPSIQDDGC 754 R G + DD +I+ + C Sbjct: 568 GGKRFGVLRSDDDDQSNIEGEAC 590 >UniRef50_Q6MNP6 Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Bdellovibrio bacteriovorus RepID=NRDJ_BDEBA Length = 764 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 108/707 (15%), Positives = 219/707 (30%), Gaps = 124/707 (17%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYES-AQFLYILVAACLFSNY--------PRETRLQYV 193 +S A+ KY + V +E+ + + V + ++ R+ + Sbjct: 52 WSQLAIDIAASKYFRKVGVPKTGHETSVRQMVDRVVKAIVASAIRQGGYFATRKEADIFA 111 Query: 194 KRFYDAVSTFKISLPTPIMSGVRT-----------------------------PTRQFSS 224 K + + + + +P+ Q S+ Sbjct: 112 KELKFILLSQRGAFNSPVWFNAGLWEAYKAQSPSEHFAWDEKKKSIQATKNAYERPQCSA 171 Query: 225 CVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKH 284 C + DS++SI + K +G G N +IR+ G +G I F + Sbjct: 172 CFIQSVDDSIESIFDLAKTEAKLFKYGSGTGSNFSKIRSKYEAT-GSGGKSSGLISFLEV 230 Query: 285 FQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLM 343 + GG R A + + H EV + K + + + Sbjct: 231 LDKGAGAIKSGGTTRRAAKMVVVDIDHPEVLDFIDWKMREEQKAHLLIAAGLSADFEGEA 290 Query: 344 YTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMM 403 Y + + + ++ + DAF E+ ER + + + + A E+++ + Sbjct: 291 YRTV------SGQNANNSVRVSDAFMKAVEQ-ERPWKLKARLTGKVLREIPAGEVWNRIT 343 Query: 404 QERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCT 463 + IQ D N P + SN C E + + C Sbjct: 344 RAAWMCADPGIQFHDTINKWHTC-PETDIIHSSNPCSEYMF------------LDDSACN 390 Query: 464 LSAFNLGAI------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGV 517 L++ NL + + A A + L+DY YP + + R LG+G Sbjct: 391 LASINLVKFLNDTGDFDFESFIHTARTLFVAQEILVDYSSYPTQRVAQNSHDYRPLGLGF 450 Query: 518 INFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWF-NETTYAKG 576 N L + G Y + S+E+A+ +G + + Sbjct: 451 ANLGSLLMRKGVAYDSDEGRAWAGALTSLMSGVAYLTSSEMARAKGPFAGYRKNSKSMLK 510 Query: 577 ILPIDTYKKDLDTIANEPLHYD------WEALRESIKTHGLRNSTLSALMPSETSSQISN 630 ++ + + P D W+ + + + +G RN+ + + P+ T + + Sbjct: 511 VMKMHERALNQVAWKMLPAGIDKAVRNLWKGVLYNGEKYGYRNAQATVIAPTGTIGLLMD 570 Query: 631 A-TNGIEPPRGYVSIKASKDGILRQVVP-------------------------------- 657 T GIEP + K G Q+V Sbjct: 571 CDTTGIEPDFSLIKFKKLVGGGEIQIVNQSVDAALASLQYFEDERQAILKYVEENNSVVG 630 Query: 658 ----DYEHLHDAYELL-----WEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGK 708 E L ++ + + +++++ +Q FI +IS N + Sbjct: 631 APQMHPEDLP-VFDTATAMPGQRVLSPESHVKMMAAVQPFISGAISKTVNMPST------ 683 Query: 709 VPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDG 753 + + + A+K GVK +Y ++ + +++ G Sbjct: 684 ATEEDISRIYFLAWKLGVKAVAVYRDGSKQSQPLNLKEKPKVVEEVG 730 >UniRef50_B1HS20 Ribonucleoside-diphosphate reductase n=28 Tax=Bacteria RepID=B1HS20_LYSSC Length = 866 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 129/687 (18%), Positives = 237/687 (34%), Gaps = 125/687 (18%) Query: 169 AQFLYILVAACLFSNYP-RETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR-QFSSCV 226 + + A L E R ++ ++FYD + + K ++ G + T F +C Sbjct: 142 YEQIAKRNATGLAIVEKTPEKRQEWFEKFYDQLVSLKFIPAGRVIYGAGSETDVTFFNCY 201 Query: 227 LIE-CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHF 285 ++ DS + I+ +++ +S+ G+G N +R + RG +G + + Sbjct: 202 VMPFVADSREGISDHRKQVMEIMSRGGGVGTNGSTLRPRNTLARGVNGKSSGSVSWLDDI 261 Query: 286 QTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK-----------NNRGVEGN----RV 330 QGG R GA + WH ++ ++ K N E + Sbjct: 262 AKLTHLVEQGGSRRGAQMIMLADWHPDIVEFIISKMQNPRILRYLIENTTDETIIRLAKE 321 Query: 331 RHMDYGVQINKLMY-------------------------TRLLKGEDITLFSP------S 359 + + + + +L G T+ +P + Sbjct: 322 KLNFKPLSMQEEAMYQGIVNYKSIEGLGGFDTAIIREAENKLRDGGTYTVHNPEFLTGAN 381 Query: 360 DVPGLYDAFFADQ------------------EEFERLYTKYEKDDSIR-----------K 390 L F EE T++ +R Sbjct: 382 ISVTLTKEFMEAVENDDDFELRFPAVEEYSKEEMSAYNTEWHNVGDVREWEKMGYKIRTY 441 Query: 391 QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN 450 + +KA EL++L+ + I +D+ N + V +N C E L Sbjct: 442 RTIKAKELWNLINVCATYSAEPGIFFIDNANDMTNAKAYGQSVVATNPCGEQPLAP---- 497 Query: 451 DVNDENGEIALCTLSAFNLGAI-------NNLDELEELAILAVRALDALLDYQDYPIPAA 503 ++C L+A NL + + L E + VR D ++D Y + Sbjct: 498 --------YSVCNLAAVNLAQFANKDNQTVDYEALRETVRVGVRMQDNVIDATPYFLEEN 549 Query: 504 KRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG 563 + A+G R +G+GV+ A L K Y + N L + F+ I +AS ELAKE+G Sbjct: 550 RVQALGERRVGLGVMGLADLLIYCEKEYGSEAGNALVDEIFKTIAETAYEASTELAKERG 609 Query: 564 ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSE 623 + P+ T + + + + ++E I G+RNS L + P+ Sbjct: 610 SFPFLVGATDEETARLRKAFTETGF------MEKMPAHIKEQILATGIRNSHLLTVAPTG 663 Query: 624 TSSQISNATNGIEPPRGYVSIKASKDGILRQV-------------VPDYEHLHDAYELLW 670 ++ + G+EP + ++ + G +V + + L + + Sbjct: 664 STGTMVGVATGLEPYFSFTYYRSGRLGKFIEVKAEIVKEYLDRHPEANEQELPEWFVTAM 723 Query: 671 EMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--T 728 E+ + + + I+QK+ID SIS N +QQ+ K YK G K T Sbjct: 724 ELK-PEAHADVQCIIQKWIDSSISKTVNAPKG------YTVQQVEKVYERLYKGGAKGGT 776 Query: 729 LYYQNTRDGAEDAQDDLVPSIQDDGCE 755 +Y +RD + E Sbjct: 777 VYVDGSRDSQVLTLKAEENDMDQLSFE 803 >UniRef50_Q7UI46 Vitamin B12-dependent ribonucleotide reductase n=3 Tax=Planctomycetaceae RepID=NRDJ_RHOBA Length = 1040 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 121/795 (15%), Positives = 236/795 (29%), Gaps = 129/795 (16%) Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKK--AYGQFEPPALYDHVVKMVEMGK------ 114 A I + P + + + + + R+K + + L + G+ Sbjct: 7 ESNATSRIPANDPALEKVDSEHGVEYAREKFGTALRGDRAGLKFESKFCPDDGRTPFATT 66 Query: 115 YDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYE-SAQFLY 173 + +E + D + ++S A + KY + + E S + L Sbjct: 67 AWDLRSAAIKDESGNALFEQTDCEVPASWSQLATNVVVSKYFYGDPKNTDERERSVRQLI 126 Query: 174 ILVAACLFS---NYPRETRLQYVKRFYDAVSTFKI----SLPTPIMSGVRT--------- 217 V + + +RFY ++ + + +P+ V Sbjct: 127 HRVTRTISDWGLADGYFDTPEDGERFYRDLTWLSLHQHGAFNSPVWFNVGLHAQYDVEGD 186 Query: 218 --------------------PTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGIN 257 Q S+C + D+++ I + + +G G + Sbjct: 187 MCNWHWDRTENTTAQPDNPYEYPQGSACFIQSVDDNMEDIMRLACSEAMLFKFGSGTGTD 246 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESL 316 IR+ + G +G + F + + + GG R A +WH ++ Sbjct: 247 LSTIRSQREKLSG-GGTPSGPLSFMRVYDSIAGVVKSGGKTRRAAKMQSLKVWHPDILEF 305 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 + K + + + Y N Y + + + L D + + E Sbjct: 306 IECKWAEEKKAHALIREGYDSNFNGEAYASV------CFQNANLSVRLTDDYMEAVRKNE 359 Query: 377 RLYTKYEKD-DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQ 435 T++ D + A EL + M + G +Q N P + Sbjct: 360 NFQTRWITDKPTTEPPSYVAKELLNKMAECAWHCGDPGVQYDTTINKWHTC-PNSGAINA 418 Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------NNLDELEELAILAVRAL 489 SN C E + C L++ NL + + A Sbjct: 419 SNPCSEYMF------------LDDTACNLASINLMKFVQQDGSFDHERFRAACRTFFIAQ 466 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 + L+D+ YP R + R LG+G N + G Y +A + + Sbjct: 467 EILVDHASYPTEPIARNSHKFRPLGLGYSNLGSVIMTAGLPYDSDAARGMCGSLTALLHG 526 Query: 550 YLLKASNELAKEQGACPWFNETTYAKGILPI------DTYKKDLDTIANEPLHYDWEALR 603 + S ELA G + E + D D E W+ + Sbjct: 527 EANRTSAELASVVGTFDGYVENEAPMLRVMQMHRDACDQINDDGPAELKEAARELWDGVL 586 Query: 604 ESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPD---- 658 E + +G RN+ + L P+ T S + + T GIEP V K G + ++V Sbjct: 587 EIGEKYGFRNAQATVLAPTGTISFMMDCDTTGIEPDIALVKYKQLAGGGMLKIVNQTVKL 646 Query: 659 -YEHLHDAYELLWEMPGN------------------------------------DGYLQL 681 + L + + E+ ++ + Sbjct: 647 GLKTLGYDADTIDEILKYVDANDTIEGAPGLQDEHLAVFDCAFKPANGVRSIGWRAHITM 706 Query: 682 VGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDA 741 + Q F+ +IS N V Q + ++ G+K + DG++ + Sbjct: 707 MAAAQPFLSGAISKTVNMPT------DVTPQDIADAYFWGWELGLKAIAIYR--DGSKQS 758 Query: 742 QDDLVPSIQDDGCES 756 Q S + ++ Sbjct: 759 QPLNTKSDEQKATDA 773 >UniRef50_D2R4B9 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R4B9_9PLAN Length = 1041 Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats. Identities = 123/727 (16%), Positives = 217/727 (29%), Gaps = 124/727 (17%) Query: 116 DNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYIL 175 +E K M D + ++ A + KY T E S + L Sbjct: 50 WELRSAQIKDENGKLMFEQTDVEIPAGWTQLATNVIVSKYFYGENGTAERERSVKQLIHR 109 Query: 176 VAACLFSNYPRETRLQYVK---RFYDAVS----TFKISLPTPIMSGVRT----------- 217 V + + + +FY ++ + +P+ V Sbjct: 110 VTRTIADWGIEDGYFASAEDGEQFYRELTWLCLNQHGAFNSPVWFNVGLFNQYGVTGAKC 169 Query: 218 ------------------PTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAG 259 Q S+C + D++++I +++ +G G + Sbjct: 170 NWRWNPETGTTEQPENPYEYPQGSACFIQSVDDNMEAIMRLATSEAMLFKFGSGTGTDLS 229 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLV 318 +R+ + G +G + F + + GG R A +WH ++ + Sbjct: 230 TLRSHREKLSG-GGKPSGPLSFMRVYDQIAAVVKSGGKTRRAAKMQSLKVWHPDILEFVE 288 Query: 319 LKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDIT---LFSPSDVPGLYDAFFADQEEF 375 K E + V I K Y GE + + + L D F E+ Sbjct: 289 CKW---KEERKAH-----VLIEKGGYEANFNGEAYSSILFQNANLSVRLTDEFMQAHEKN 340 Query: 376 ERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQ 435 E+ T + D S +A L + M + G +Q N P + Sbjct: 341 EKWATHWITDASKEGPVYEARWLLNRMAECAWQCGDPGVQYDTTINKWHTC-PNSGRINA 399 Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------NNLDELEELAILAVRAL 489 SN C E + C LS+ NL N+D + L A Sbjct: 400 SNPCSEYMF------------LDDTACNLSSINLMKFREADGSFNVDRFKTACRLFFIAQ 447 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 + L+D+ YP R + R LG+G N + +G Y +A L + Sbjct: 448 EILVDHASYPTEQIARNSHAFRPLGLGYSNLGSLIMSNGLPYDSEAAYGLCGSVTALLHG 507 Query: 550 YLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP------LHYDWEALR 603 AS E+A G + + D P W+ + Sbjct: 508 AANLASAEMAAVVGPFEGYEANREPFLRVMQMHRDAVEDINPAGPADLQEAARATWDQVL 567 Query: 604 ESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVP----- 657 + G RN+ + L P+ T S + + T GIEP V K G + ++V Sbjct: 568 ALGRRTGFRNAQATVLAPTGTISFMMDCDTTGIEPDIALVKYKQLAGGGMLKIVNGTVPM 627 Query: 658 ----------------DYEHLHDAYELLWEM--------------------PGNDGYLQL 681 Y + +D E E+ ++++ Sbjct: 628 ALGKLGYDDPQIKGILKYVNENDTIEGAPELADEHLAVFDCAFKPANGVRSINWRAHIRM 687 Query: 682 VGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDA 741 + Q F+ +IS N V + ++ G+K L DG++ + Sbjct: 688 MAAAQPFLSGAISKTVNMPT------DVTPADIGDAYTWGWQLGLKALAIYR--DGSKQS 739 Query: 742 QDDLVPS 748 Q + Sbjct: 740 QPLNTKN 746 >UniRef50_O69981 Vitamin B12-dependent ribonucleotide reductase n=38 Tax=Actinomycetales RepID=NRDJ_STRCO Length = 967 Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats. Identities = 116/698 (16%), Positives = 205/698 (29%), Gaps = 132/698 (18%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN-------YPRETRLQYVK 194 +S AV + KY T + S + L + + Sbjct: 69 FWSVNAVNIVTSKYFRGAVGTPQREVSLKQLIDRIVKTYRKAGEDNKYFASPADAEIFEH 128 Query: 195 RFYDAVSTFKISLPTPIMSGVRTPTRQ-FSSCVLIECGDSLDSINATSSAIVKYVSQRAG 253 A+ S +P+ V TP Q S+C ++ DS++SI +G Sbjct: 129 ELAYALLHQIFSFNSPVWFNVGTPQPQQVSACFILSVDDSMESILDWYKEEGMIFKGGSG 188 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLE 312 G+N RIR+ + +G + F + + + GG R A + + H + Sbjct: 189 AGLNLSRIRSSKELL-SSGGNASGPVSFMRGADASAGTIKSGGATRRAAKMVILDVDHPD 247 Query: 313 VESLLVLKNNRGVEGNRVR-------------------HMDYGVQINKLMYTRLLKGEDI 353 +E + K + +R + + V++N + G Sbjct: 248 IEDFIQTKVKEEEKIRALRDAGFDMDLGGDDITSVQYQNANNSVRVNDTFMKAVQDGGKF 307 Query: 354 TLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIY 413 L S + + V A LF M + + Sbjct: 308 GLTS--------------------------RMTGEVIEEVDAKALFRKMAEAAWACADPG 341 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI- 472 IQ D N P + SN C E + C L++ NL Sbjct: 342 IQYDDTINAWHTC-PESGRINGSNPCSEYMH------------LDNTSCNLASLNLMKFL 388 Query: 473 ---------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYY 523 + + ++ L + A+D + + D+P R LGIG N Sbjct: 389 KDDGKGNQSFDAERFSKVVELVITAMDISICFADFPTQKIGENTRAFRQLGIGYANLGAL 448 Query: 524 LAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTY 583 L G Y L + + S ELA G + + Sbjct: 449 LMATGHAYDSDGGRALAGAITSLMTGTSYRRSAELAAIVGPYDGYARNAKPHLRVMKQHS 508 Query: 584 KK--------DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNG 634 + DLDT W+ + + +G RNS S + P+ T + T G Sbjct: 509 DENAKAVRMDDLDTPIWAAATEAWQDVLRLGEKNGFRNSQASVIAPTGTIGLAMSCDTTG 568 Query: 635 IEPPRGYVSIKASKDGILRQVVP-------------------------------DYEHLH 663 +EP V K G Q+V D L Sbjct: 569 LEPDLALVKFKKLVGGGSMQIVNGTVPQALRRLGYQEEQIEAIVAHIAENGNVIDAPGLK 628 Query: 664 DAYELLWEMPGNDG------YLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKD 717 + +++ + +++++ +Q +I ++S N S ++ + + Sbjct: 629 PEHYEVFDCAMGERSISAMGHVRMMAAIQPWISGALSKTVNLPES------ATVEDVEEV 682 Query: 718 LLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDG 753 A+K GVK +Y N + G + + Sbjct: 683 YFEAWKMGVKALAIYRDNCKVGQPLSAKTKTVKDTEKA 720 >UniRef50_D0LZM4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Bacteria RepID=D0LZM4_HALO1 Length = 963 Score = 437 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 117/717 (16%), Positives = 212/717 (29%), Gaps = 98/717 (13%) Query: 113 GKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFL 172 T K + +S A + KY T E S + + Sbjct: 49 EVEWELRDATITGANGKVYFEQKQVEFPKAWSQTATNVVVQKYFRGTVGTPERERSVKQM 108 Query: 173 YILVAACLFS-----NYPRETRLQYV--KRFYDAVSTFKISLPTPIMSGVRTPT-RQFSS 224 VA +F Y R + + + K++ +P+ V T Q S+ Sbjct: 109 IGRVADTIFGWGRKDGYFRSDKDAWRFRDELVHLLVNQKMAFNSPVWFNVGVETEPQCSA 168 Query: 225 CVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKH 284 C + DS+ SI + +G G N +R+ + G +G + F + Sbjct: 169 CFINSVDDSMSSILTLARTEGMLFKYGSGTGSNLSSLRSSAENLHG-GGTASGPVSFMRG 227 Query: 285 FQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLM 343 F + GG R A + H ++ + K + + Y N Sbjct: 228 FDAFAGAIKSGGKTRRAAKMVILDAEHPDIVDFVECKAKEEQKAWALIDAGYDGGFN--- 284 Query: 344 YTRLLKGEDITLFSP---SDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFS 400 G + + + D+F + T D + A EL Sbjct: 285 ----EPGGAYDSVNYQNANHSVRVSDSFMQAVVDDSSWTTHAVLDGRDIH-TMPARELMR 339 Query: 401 LMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIA 460 + G +Q N +P A + SN C E + + Sbjct: 340 KIADAAHLCGDPGMQFDSTINDWNPCI-GTARINASNPCSEYMF------------LDDS 386 Query: 461 LCTLSAFNLGAI------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLG 514 C L++ NL +++ + + A++ ++D YP P + R LG Sbjct: 387 ACNLASLNLRRFQSEDGNFDVEAYKHAIEITTLAMEIIVDNASYPTPKIGENSHRFRPLG 446 Query: 515 IGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE-QGACPWFNETTY 573 +G N L G Y + + S +A + G ++E Sbjct: 447 LGYANLGALLMSRGLPYDSEPGRAYAAALTAILCGQAYRTSARIAADATGPFAGYDENRE 506 Query: 574 AKGILP-------IDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 + D + E W + E + HG RN+ + L P+ T + Sbjct: 507 PFLRVMNKHRKAVADIDAALVPYDLMEAARGAWNDVVELGEKHGFRNAQTTVLAPTGTIA 566 Query: 627 QISNA-TNGIEPPRGYVSIKASKDGILRQVVPD--YEHLHD------------------- 664 + + T G+EP V K G + ++V E L Sbjct: 567 FLMDCDTTGVEPDIALVKYKRLVGGGMLKMVNQTVPEALRRLGYSEQQLEGIINHIDTQE 626 Query: 665 --------------AYELLWEMP------GNDGYLQLVGIMQKFIDQSISANTNYDPSRF 704 ++ + P G+++++ +Q F+ +IS N Sbjct: 627 SIEGTSVLKEEHLPVFDCAFRSPSGTRSIHYMGHIRMMSAVQPFLSGAISKTVNLP---- 682 Query: 705 PSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 + + L A+K G+K + DG + Q Q + A + Sbjct: 683 --SDCTVGDIEDAYLQAWKLGLKAIAVYR--DGCKRTQPLSTSKQQATSNGAIAKTL 735 >UniRef50_A7HCF4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=5 Tax=Cystobacterineae RepID=A7HCF4_ANADF Length = 929 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 122/737 (16%), Positives = 223/737 (30%), Gaps = 95/737 (12%) Query: 83 RLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMT 142 R RK A P + E + D + + Sbjct: 10 RARGAKARKVARRGLTIPRTFTTRGVDPAEELAWETRTAQINGEGGAVIFEQRDVEVPKS 69 Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSN-------YPRETRLQYVKR 195 +S A + KY + + S + L V + + + E + Sbjct: 70 WSMLATNVVASKYFRGSLGSPTRERSVKQLVGRVVSTIAAWGRKDGYFATEEDAAAFEAD 129 Query: 196 FYDAVSTFKISLPTPIMSGVRTP-TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGI 254 V K+S +P+ V Q S+C + GDS+DSI + +G Sbjct: 130 LAHLVYRQKMSFNSPVWFNVGVEEHPQCSACFINSVGDSMDSILRLAHTEGMLFKYGSGA 189 Query: 255 GINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEV 313 G N +IR+ + G +G + F + F GG R A + H ++ Sbjct: 190 GSNLSKIRSSKERLSG-GGEASGPVSFMRGFDAFAGVIKSGGKTRRAAKMVILDADHPDI 248 Query: 314 ESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLF--SPSDVPGLYDAFFAD 371 + K + + + Y N + G ++F + + + D F Sbjct: 249 GEFVSCKADEEKKAWALIDAGYDGGFN------VKGGAYDSVFFQNANHSIRVTDGFMRS 302 Query: 372 QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIA 431 + +R + + D + ++A +L + + G +Q N PA Sbjct: 303 VLD-DRAWELTARTDGHALESIRARDLMRQITEAAWLCGDPGMQFDTTINAWHTC-PATD 360 Query: 432 PVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------NNLDELEELAILA 485 + SN C E + + C L++ NL +++ + L Sbjct: 361 RINASNPCSEYMF------------LDDSACNLASLNLMHFRGIDGAFDVESFKRAVDLT 408 Query: 486 VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFE 545 V A + L+ YP + + R LG+G N L G Y Sbjct: 409 VLAQEILVSNAKYPTEQIGKNSEDYRPLGLGYANLGALLMASGLPYDSDGGRACAGAITA 468 Query: 546 AIQYYLLKASNELAKEQGACPWFNETT------YAKGILPIDTYKKDLDTIANEPLHYD- 598 + S +A+ G + K +D D Sbjct: 469 LMTGEAYAMSARIAERMGPFAGYERNREPFLGVVRKHANHVDRIDPTFVERPLLDAARDA 528 Query: 599 WEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVP 657 W G RN+ L+ L P+ T + + T GIEP V K G + ++V Sbjct: 529 WGDALRLGTQSGYRNAQLTVLAPTGTIGFMMDCDTTGIEPDIALVKYKKLVGGGVLKIVN 588 Query: 658 D-------------------------------YEHLHDAYELLWEM----------PGND 676 + L DA+ +++ Sbjct: 589 NTVPLALQRLGYSADAIASTLEFIDKVETIEGAPELRDAHLPVFDCAFKPQNGTRSIHYM 648 Query: 677 GYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRD 736 G+++++G +Q F+ +IS N + + L A+K G+K + D Sbjct: 649 GHIRMMGAVQPFLSGAISKTVNMPT------EATPADIETAYLEAWKLGLKAIAVYR--D 700 Query: 737 GAEDAQDDLVPSIQDDG 753 G + +Q +++ Sbjct: 701 GCKRSQPLNTGKAKEEE 717 >UniRef50_C6JQA3 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JQA3_FUSVA Length = 754 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 121/639 (18%), Positives = 224/639 (35%), Gaps = 115/639 (17%) Query: 146 AAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKI 205 + E KY E+ V+ + + ++ + Sbjct: 13 LGIDIWEKKYKYDG-------ETFSEWLERVSGG-------------EQELKEMIANKEF 52 Query: 206 SLPTPIMSGVRT----PTRQFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGR 260 I+S +S+C +I D+L+SI T+ + + S G G++ + Sbjct: 53 IFAGRILSNRGLYKLGRKITYSNCYVIAPPEDNLESIFDTAKKLARTYSYGGGCGVDISK 112 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 +R GS + TG I F + + Q G R GA + + H +V + +K Sbjct: 113 LRPRGSEVNNSAKHTTGSISFMELYNLTTDIIGQKG-RRGALMISIDVNHPDVSEFISIK 171 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 + N+++ + V+++ +++G EF Sbjct: 172 ----SDLNKIQKANISVRVDANFMKAVIEG------------------MQFVTEF----- 204 Query: 381 KYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPF-DPAIAPVRQSNLC 439 E + + + A +LF + ++ I D + + + +N C Sbjct: 205 LVEDTGEVVTKEIDARKLFKELARQNWKFAEPGILFWDRISKWNLLSEDEEFEYAGTNPC 264 Query: 440 LEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALDALLD 494 E LP C L + L N D L ++ +V+AL+ +LD Sbjct: 265 AEEPLPAG------------GSCLLGSLILPTFVEGKEFNFDRLAKVVQKSVKALNDVLD 312 Query: 495 --YQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLL 552 +P+ + R +G+G++ L K G +Y + K + I L Sbjct: 313 EGLPLHPLEEQRESVRDWRQIGLGILGVGDLLIKIGMKYGSPESLEFCDKIAKVIVDNAL 372 Query: 553 KASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLR 612 KAS LAK+ GA P + K ++ E I+ +GLR Sbjct: 373 KASALLAKDFGAYPKYKADKVLKSEFLLENASI---------------ETLELIEKYGLR 417 Query: 613 NSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS-----------------KDGILRQV 655 NS L + P+ + + + GIEP + ++ + K + Sbjct: 418 NSQLLTIAPTGSIGTMLETSTGIEPNFAFSYVRKTESLHGEDVFYKVFIPIAKKYMEENN 477 Query: 656 VPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLL 715 + D E L + + + D +++ G+ QK ID SIS+ N KV ++++ Sbjct: 478 ITDEEDLPEYFVTAQSLNPYDR-IKMQGVWQKRIDASISSTINL------VNKVSVEEVE 530 Query: 716 KDLLTAYKFGVK--TLYYQNT-RDGAEDAQDDLVPSIQD 751 K L A+K G+K T+Y R+G I++ Sbjct: 531 KLYLEAWKNGLKGMTIYRAGCDREGILTVTPKAEKKIEE 569 >UniRef50_A4IY36 Ribonucleoside-diphosphate reductase n=26 Tax=root RepID=A4IY36_FRATW Length = 590 Score = 434 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 134/681 (19%), Positives = 224/681 (32%), Gaps = 149/681 (21%) Query: 131 MDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRL 190 + ID RD S A + L Y +QN S Q+ + A + Sbjct: 7 LGINIDLSRDRELSEQAQQLLTNYYCLQNEP------SPQYAFARAAVAYS-----FGDM 55 Query: 191 QYVKRFYDAVSTFKISLPTPIMSGVRTP----TRQFSSCVLIECGDSLDSINATSSAIVK 246 +R Y A + +P++S P SC L DSL+ + SS + Sbjct: 56 NLAQRIYAAAAKGWFMFASPVLSNAPLPGVKVKSLPISCFLSYVPDSLEGLIEHSSELRW 115 Query: 247 YVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFY 306 + G+G + +RA G IPF + + QG R G+ + Sbjct: 116 LSVKGGGVGGHWSSVRA-------VSDKAPGPIPFMHTVDADMVAYRQGKTRKGSYAAYM 168 Query: 307 PMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYD 366 + H ++ L ++ G + ++ + V + + +D L P D Sbjct: 169 DISHPDIIEFLGIRVPTGDVNRKCLNLHHAVNLTDDFMQAVANDQDWKLIDPDD------ 222 Query: 367 AFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP- 425 + +KA +++ +++ R TG Y+ +D N P Sbjct: 223 --------------------KTVRDVIKARKIWETILETRYRTGEPYLNFIDTANRALPK 262 Query: 426 -FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAIL 484 ++ SNLC EI L T + A+C LS+ NL + + L Sbjct: 263 SQKDLGLTIKGSNLCNEIHLVT--------DEKRTAVCCLSSVNLERYDEWKD-TSLIKD 313 Query: 485 AVRALDAL----LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 +R LD + +D+ I A+ A R+LG+G + F YL H + A + Sbjct: 314 LIRFLDNVLQFFIDHAGDEISKARYSASRERSLGLGAMGFHSYLQLHRVPFESQRAKEIN 373 Query: 541 HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE 600 + F+ I+ L+ + L E+G P Sbjct: 374 EEIFKRIKEQALEETLILGAEKGEAP---------------------------------- 399 Query: 601 ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK------------ 648 + G RN+ L A+ P+ SS I N + IEP + ++ Sbjct: 400 ----DMAGTGRRNAHLLAIAPNANSSLILNTSPSIEPWKANAFTSRTRVGSHLNKNKYLE 455 Query: 649 --------------------DGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKF 688 G ++Q+ + L + ++ EM D + L G QK+ Sbjct: 456 QELEKIGKNTEEVWSDIITNGGSVQQLDFLSKELKEVFKTAIEMD-QDWLVYLGGERQKY 514 Query: 689 IDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLV-- 746 + Q S N + L K A+K+G K LYY T Sbjct: 515 LCQGQSLNVFFP------AGASRGYLHKVHFNAWKYGCKGLYYLRTETSNRAENISKKVE 568 Query: 747 -------PSIQDDGCESGACK 760 I+ E AC+ Sbjct: 569 KKRLVEFSEIKQSENECIACE 589 >UniRef50_Q6UDJ2 Ribonucleoside-diphosphate reductase n=2 Tax=Iltovirus RepID=Q6UDJ2_9ALPH Length = 811 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 151/817 (18%), Positives = 276/817 (33%), Gaps = 110/817 (13%) Query: 18 NLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDY 77 ++ L L + + I + I + A Sbjct: 31 TPQRLFENLLHLENALKARGYDTDSAGAPALGPTTLTMEAIADRI--TLIINRFKAAVRL 88 Query: 78 QYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDH 137 RL + + + + + + +++ E ++ + Sbjct: 89 DLELYRLLAELVHIRIRTKTVSMQAWIELRGLSRECAEFILERKNFVCELMERFGEV--Y 146 Query: 138 DRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVK--- 194 + ++ E YL + + ES ++ +AA Sbjct: 147 PTLSRVGLQSARKFESMYLGKLKNG--RLESVGQFFLRIAAEAARGVANNDAFAAAVFRD 204 Query: 195 ------------RFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG--DSLDSINAT 240 F+ A+ +I PTP+M T +R ++SC L++ + D + + Sbjct: 205 GTRAPDANTVFCLFFMALCRQEIVPPTPVMLFAGTESRSYASCFLLDVRGRHTRDVLTSI 264 Query: 241 SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG 300 + I+ + GIG+ + +G + K + + + + R Sbjct: 265 AEEIIPVMHSHGGIGLYM-------DCDSNWDDNSSGMMLALKALDSIIAASNAVSARPS 317 Query: 301 AATLFYPMWHLEVESLLVLKNN-RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPS 359 ++ WH ++ +L + G E R + + + + L R TLF Sbjct: 318 GLCVYVEPWHRDIMKILRCRGVLAGNEETRCDNTFFALWMPDLFMKRFEANGTWTLFDGR 377 Query: 360 DVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDH 419 L D + EEFE+ Y E+ ++ A ++ +++ STG ++ Sbjct: 378 -AAHLSDLY---GEEFEKEYELLERK-NVGIATYPARDVMFALIKSAVSTGTPFVMFKHA 432 Query: 420 CNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------- 472 N + FD A ++ SNLC EI T ++ + +C L++ NL A Sbjct: 433 VNRNYFFDMAGRAMKCSNLCTEIVHMT--------DDESVGVCNLTSLNLAAFVTRRNAL 484 Query: 473 --------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYL 524 + + +A ++AL+ + PI A G R++GIGV F Sbjct: 485 PGTPPIGTFDYSSFRDACAVATVFINALMSLSNLPIKRATTGNERLRSIGIGVQGFHTAC 544 Query: 525 AKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG--ACPWFNETTYAKGILPIDT 582 G A K FEA+ + S + E G F+E+ YAKG L +D Sbjct: 545 LLQGFGLDSVEACRFNGKLFEALALTTFQTSCRIC-ELGMNPFRGFSESKYAKGWLHMDG 603 Query: 583 YKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYV 642 + A W+ LRE+IK +GL N L ALMP+ +SSQ++ + GI P G + Sbjct: 604 W------PARHLYFDGWDRLRENIKAYGLYNCQLVALMPTASSSQLTEVSEGIHPVFGNI 657 Query: 643 SIKASKDGILRQVVPDYEHLHD-------------------------------------- 664 K + G Q+ + Sbjct: 658 FSKITTTGEDIQLNVALMETIECLYPNKAERRDILERLHKNKWSTRGAFGAALPSQHPLT 717 Query: 665 AYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKF 724 ++ +E + L+L F+D S S G V ++ L TA+K+ Sbjct: 718 KFDTAFEAD-QEHLLRLSADRAPFVDHSQSTTLYVVEED--DGAVRASRVAHLLTTAFKY 774 Query: 725 GVKT-LYYQNTRDGAEDAQDDLVPSIQDDGCESGACK 760 G+KT +YY R ++ + + D AC+ Sbjct: 775 GLKTGMYYCKVRKATDNGVFLGTDTCRRDDPTCLACQ 811 >UniRef50_C9MSK4 Ribonucleoside-diphosphate reductase n=8 Tax=Prevotella RepID=C9MSK4_9BACT Length = 902 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 116/698 (16%), Positives = 227/698 (32%), Gaps = 128/698 (18%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAV 200 A + KY +++ + +S + ++ +A + + + ++ + Sbjct: 56 FNGDELAARVWVNKYAMKDSLGNIYEKSPEQMHRRIAKEIARIEHKYKNPLTEEEIFNLL 115 Query: 201 STFKIS-LPTPIMSGVRTPTR--QFSSCVLIECG---DSLDSINATSSAIVKYVSQRAGI 254 F+ M+G+ + S+C +I DS +I V+ + +R G+ Sbjct: 116 DHFRYIIPAGSPMTGIGNDHQVASLSNCFVIGLDGDADSYGAILRIDEEQVQLMKRRGGV 175 Query: 255 GINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVE 314 G + IR GSP+ TG +PF + + + + +Q G R GA L + H + E Sbjct: 176 GHDLSHIRPKGSPVHNSALTSTGLVPFMERYSNSTREVAQDG-RRGALMLSVSIKHPDSE 234 Query: 315 SLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEE 374 + + K G +V + V+I + + P Sbjct: 235 AFIDAKMEEG----KVTGANVSVKITDEFMRAAIDDKPYEQQFP---------------- 274 Query: 375 FERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD---PAIA 431 + + ++V A L+ ++ + + D S D Sbjct: 275 -------IDSTEPKCTKKVSAKALWEKIVHNAWKSAEPGVLFWDTIIRESIPDCYADLGF 327 Query: 432 PVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDA 491 +N C EI L P + + + L F A + D + A LA R +D Sbjct: 328 RTVSTNPCGEIPL--CPYDSCRLLSLNLYSYVLDPFTDHACFDFDLFSKHAQLAQRIMDD 385 Query: 492 LLDY------------------------QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKH 527 ++D + + K + R G+G+ +A Sbjct: 386 IVDLEMEKIDLIMAKVKSDPQVDEVKEAEYHLWEKIKDKSGKGRRTGVGITAEGDMIAAM 445 Query: 528 GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDL 587 G RY A + + A+ ++S +A+E+GA ++ K++ Sbjct: 446 GLRYGTQEATDFSVSVHRALALNAYRSSVRMAEERGAFAIYDA-------------KREE 492 Query: 588 DTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKA- 646 L L E + +G RN + P+ T+S ++ T+GIEP V + Sbjct: 493 HNPFILRLKEADAQLYEEMIRYGRRNIACLTIAPTGTTSLMTQTTSGIEPVFMPVYKRRR 552 Query: 647 -SKDGILRQVVPDYEHLHDAYE-------------------------------------- 667 V + + D++E Sbjct: 553 KVNPNDTDVHVDFVDEVGDSFEEYIVYHRKFLTWMEVNGIDTQKKYSQEEIDTLVKRSPY 612 Query: 668 ---LLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKF 724 ++ +++ G +QK++D SIS N S + + K + A++ Sbjct: 613 YKATANDVDWLMK-VRMQGTIQKWVDHSISVTVNLPNSVDEAL------VNKLYVEAWRS 665 Query: 725 GVK--TLYYQNTRDGAEDAQDDLVPSIQDDGCESGACK 760 G K T+Y +R G + + + E K Sbjct: 666 GCKGCTIYRDGSRSGVMISVSKKDKKKETNTAEEEKVK 703 >UniRef50_B2UIU6 Ribonucleoside-diphosphate reductase n=3 Tax=Ralstonia RepID=B2UIU6_RALPJ Length = 605 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 108/643 (16%), Positives = 197/643 (30%), Gaps = 92/643 (14%) Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPT 209 L +YL + ++ VA L + + R + + FY + I Sbjct: 19 VLADRYLAPGET------TCNDVFKRVAHALAAAEQPDQRAHFTRLFYANLLQGAIG-AG 71 Query: 210 PIMSGVRT-PTRQFSSCVLIECGDSLDSINAT------SSAIVKYVSQRAGIGINAGRIR 262 IM+ + +C + G S S+ A + + G+G + I Sbjct: 72 RIMANAGSANHGTMVNCFVHPIGASEQSVADASDVERALHAAQRTLQMGGGVGYDFSVIA 131 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 + + F + + RGGA H ++ + + K Sbjct: 132 PADAEQATSNSGTGSVCAVLDSFDRVCATQALVNTRGGAQMAVLRCDHPDLATFITAKR- 190 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 R + V + + L VP Sbjct: 191 ---GRRRWATFNLSVAVTDAFMRAVADDGLWCLQH-RAVPNAQRLATGA---------HA 237 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEI 442 + V A +L++++ + + + +D N + I + +N C E Sbjct: 238 LSNGKWCYAVVPARQLWNMIAEAAHHSAEPGLLFIDTINAANDL-AEIETIAATNPCGEQ 296 Query: 443 ALPTKPLNDVNDENGEIALCTLSAFNLGAI------------NNLDELEELAILAVRALD 490 LP C L ++ + L + VR LD Sbjct: 297 PLPPW------------GSCVLGPIDVSRWVQWPFGMGGQPLFDFVGLSRAVRVQVRMLD 344 Query: 491 ALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYY 550 ++ +P+P A +R +G+GV A L Y +A + ++ Sbjct: 345 NAIEITRWPLPEHMHEAQAKRRIGVGVTGLADALTMMCLPYDAPAARCFAAQIGRCLRDS 404 Query: 551 LLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHG 610 AS LA E+G P F+ + +A+ E++ HG Sbjct: 405 AYAASAALACERGPYPLFS---------------PERSLAPGHFSAALPKAVCEAVAKHG 449 Query: 611 LRNSTLSALMPSETSSQISN--ATNGIEPPRGYVSIKASKDG---------------ILR 653 LRNS L +L P+ + S ++GIEP +V + + + R Sbjct: 450 LRNSHLLSLAPTGSVSLAFGDNCSSGIEPAFDWVYQRRVRIQHRAPQLYRTENRAYRLFR 509 Query: 654 QVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQ 713 + L + ++ G D +L++V +Q F+D SIS S Q Sbjct: 510 ALYGQRAALPGYFVTARQIDGLD-HLRMVATLQPFVDASISKTVLLPCS------ASCAQ 562 Query: 714 LLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCES 756 + L A++ +K + G +D +L P C Sbjct: 563 VAALLFHAWQLRLKGITIFRPDTGPDDVLSELPPLNGRLTCFC 605 >UniRef50_C9L7Y1 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Blautia hansenii DSM 20583 RepID=C9L7Y1_RUMHA Length = 763 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 104/659 (15%), Positives = 202/659 (30%), Gaps = 116/659 (17%) Query: 137 HDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRF 196 + + KY N ES V+ Sbjct: 4 EQWLGKDNTLGIDIWNKKYRYNN-------ESFDEWLDRVSGGDSD-------------L 43 Query: 197 YDAVSTFKISLPTPIMSGVRT----PTRQFSSCVLI-ECGDSLDSINATSSAIVKYVSQR 251 + K I+S S+C ++ D+++SI + + + S Sbjct: 44 RQLILEKKFLFGGRILSNRGLDKLGEKVTLSNCYVVEPPEDNIESIFDCAKKLARTYSYG 103 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 G G++ ++ G+ + +G + F + Q G R GA + H Sbjct: 104 GGCGVDISKLAPKGARVTNTAKETSGSVSFMDLYSLVTGLIGQNG-RRGALMISIACDHP 162 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFAD 371 ++E + +K + ++V + ++I + + L Sbjct: 163 DLEEFIEIK----SDLDKVTKANISIRITDKFMLAVKMRKPFVLSF-------------- 204 Query: 372 QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD-PAI 430 E+ ++ + A +F + + + D + Sbjct: 205 ---------TREETGETIRKEIDAYSVFHKLCEMNWDYAEPGMLFWDRIENWNLLSADKE 255 Query: 431 APVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------NNLDELEELAIL 484 +N C E LP C L + NL N + ++ + Sbjct: 256 FSYAGTNPCAEEPLPAG------------GSCLLGSINLSEFVTENKTFNFTDFKKTVDI 303 Query: 485 AVRALDALLD--YQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHK 542 AVRAL+ +LD +P+ + R +G+G+ A L K G +Y + +L Sbjct: 304 AVRALNIVLDEGLPLHPLKEQRESVRDWRQIGLGIFGLADLLIKIGIKYGSPESIDLCDM 363 Query: 543 TFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEAL 602 A+ Y + SN +A E G+ P + + + + Sbjct: 364 IGHAMAYQAIMTSNSIAIEVGSYPKYKPDAVKQSPFFTEHIDEL---------------Y 408 Query: 603 RESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS--------------- 647 RE+I GL NS L + P+ + S + + GIEP + + Sbjct: 409 RENISEIGLCNSQLLTIAPTGSLSSMLGVSGGIEPVYANYYTRKTESLHGHDEYYKVYTP 468 Query: 648 --KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 K I + D L D + + + I Q+ ID SIS+ N Sbjct: 469 IVKKYIDEYGLKDDSELPDFFVTAQ-TLNYKERIDMQSIWQRHIDASISSTVNVP----- 522 Query: 706 SGKVPMQQLLKDLLTAYKFGVK--TLYYQNT-RDGAEDAQDDLVPSIQDDGCESGACKI 761 ++ L A++ G+K T++ R G + + +++ + + Sbjct: 523 -NNFTVKDTEDLYLYAWEKGLKGVTIFRDGCKRTGILTTDNKKKETKENNSDSNVPITL 580 >UniRef50_Q1ISM3 Ribonucleoside-diphosphate reductase n=3 Tax=Bacteria RepID=Q1ISM3_ACIBL Length = 1004 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 120/758 (15%), Positives = 226/758 (29%), Gaps = 137/758 (18%) Query: 112 MGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQF 171 T+ + ++ +D + +S A + KYL T E + Sbjct: 46 DEVEWELRTAAITDAQGNKIFEQLDVETPKDWSMTATNIVASKYLHGTLGTSERESGVRA 105 Query: 172 LYILVA-----ACLFSNYPRETRLQYV--KRFYDAVSTFKISLPTPIMSGVRTPT----- 219 L VA + Y R + + + K++ +P+ V Sbjct: 106 LIARVAETITRWGIEGGYFRTSDDAAIFHDELVHLLVQQKMAFNSPVWFNVGCDRIEPQA 165 Query: 220 -----------------------RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGI 256 Q S+C + DSLDSI + +G G Sbjct: 166 DGANWHWNFLKQQAEFGPVGYTRPQCSACFINSVHDSLDSILTLAKTEGMLFKWGSGTGT 225 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVES 315 N +R+ + G +G + F + F GG R A + + H ++ Sbjct: 226 NLSPLRSSNEQLSG-GGTASGPLSFMRGFDAFAGVIKSGGKTRRAAKMVILNIEHPDIVE 284 Query: 316 LLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEF 375 + K + + Y I + ++ + D F Sbjct: 285 FIDCKAKEEAKAWALMQQGYDGSSPD-----AEAYSSIFFQNANNSVRVTDDFMYAVVRD 339 Query: 376 ERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQ 435 TK K + + KA L S + + G +Q N A + Sbjct: 340 ADFSTKAVKSGDVV-KTFKARWLLSKISEATWQCGDPGMQYDTTVNRWHT-SKNTARINA 397 Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALD 490 SN C E + + C L++ NL ++ + + A + Sbjct: 398 SNPCSEYMF------------LDDSACNLASLNLMKFAPNGTFDVAAYRHACAITITAQE 445 Query: 491 ALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYY 550 L+D YP + + + R LG+G N L G Y + + + Sbjct: 446 ILVDNAGYPTESIMKNSHDYRPLGLGYANLGALLMAAGLPYDSDAGRDYAACVTAIMCGE 505 Query: 551 LLKASNELAKEQG------------------ACPWF--NETTYAKGILPIDTY-----KK 585 S+++A E G ACP + N + I +K Sbjct: 506 AYLQSSKIA-ELGQPLTPATPITQSVEITGSACPGWYVNREPFLDVIRMHRASVNNINQK 564 Query: 586 DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSI 644 ++ E W+ + + HG RNS ++ L P+ T + + T GIEP V Sbjct: 565 NVPAPVFEAAKATWDEALQHGERHGYRNSQVTVLAPTGTIGFMMDCDTTGIEPDLALVKY 624 Query: 645 KASKDGILRQVVPD-------------------------------YEHLHDAYELLWE-- 671 K G + ++V + H+ D + +++ Sbjct: 625 KKLVGGGMIKIVNNTVPAALFKLGYTSDQANATVSYIDATGTIEGAPHIKDEHLAVFDCS 684 Query: 672 --------MPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYK 723 G+++++ Q FI +IS N + +++ + ++K Sbjct: 685 FKPAKGTRTISYMGHVKMMAATQPFISGAISKTVNLP------KDATIDDIMEAYIQSWK 738 Query: 724 FGVK--TLYYQNTRDGAEDAQDDLVPSIQDDGCESGAC 759 G+K +Y ++ G + + E+ Sbjct: 739 LGLKAVAIYRDGSKGGQPLNASGTSTTDKLKKAEAAPV 776 >UniRef50_C6LFM8 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=4 Tax=Bacteria RepID=C6LFM8_9FIRM Length = 757 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 114/657 (17%), Positives = 211/657 (32%), Gaps = 119/657 (18%) Query: 134 FIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYV 193 + + + + E KY + E + ++ Sbjct: 1 MVIEEWLGKDNQLGMDIWERKYRSEG-------EDFEAWISRISGG-------------N 40 Query: 194 KRFYDAVSTFKISLPTPIMSGVRTPTR----QFSSCVLIECG-DSLDSINATSSAIVKYV 248 + + K I+S + +S+C +I D ++ I + + + Sbjct: 41 EEIARYIKEKKFLFGGRILSNRGLDQKDRKVTYSNCYVITPPKDEIEDIFECAKKLARTY 100 Query: 249 SQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPM 308 S G GI+ + G+ I +G + F + + Q G R GA + Sbjct: 101 SYGGGCGIDISGLAPRGARIHNAAKETSGAVSFMELYSMVTALIGQNG-RRGALMISIDS 159 Query: 309 WHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF 368 H +VE + LK + +V + V+I++ + + + L +V Sbjct: 160 SHPDVEEFINLKT----DLEKVTKANISVRIHEDFMKAVKENGEYLLSFTREV------- 208 Query: 369 FADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPF-D 427 ++ V+A ELF + D + + Sbjct: 209 ----------------TGERIEKTVQAKELFHKIALTNWDYAEPGALFWDRITGWNLLSN 252 Query: 428 PAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDE 477 N C E LP C L + NL +++ Sbjct: 253 TKEFSYAGVNPCAEEPLPAG------------GSCLLGSINLSEFVQYPFTEAATFDMEG 300 Query: 478 LEELAILAVRALDALLD--YQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGS 535 + +VRAL+ +L+ +P+ + R +G+G++ A L K G Y + Sbjct: 301 FRKCVQASVRALNEVLEEGLPLHPLQEQRESVAKWRQIGLGIMGLADALLKLGLTYGEQD 360 Query: 536 ANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPL 595 A + K A+ + S ELAKEQGA P N + L Sbjct: 361 AVAMCDKIGFAMADAAIATSAELAKEQGAFPACNAEEIME---------------TPYFL 405 Query: 596 HYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASK------- 648 E RE ++ +GLRNS L + P+ T S + + GIEP + ++ Sbjct: 406 ANTSEKTRELVRKYGLRNSQLLTIAPTGTLSTMLGISGGIEPVYANSYQRKTESLHGTDV 465 Query: 649 ----------DGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTN 698 + + + + + L + M + + I Q ID SIS+ N Sbjct: 466 YYKVYTKIVDEYMKQHGITEENALPGYFVTAM-MLDYHQRIDMQSIWQTHIDASISSTVN 524 Query: 699 YDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDG 753 S +++ L A++ G+K T+Y + +D + +G Sbjct: 525 VPNS------FTVEETESLYLYAWERGLKGITIYRDGCKRTGVLTTNDKKKVVAGEG 575 >UniRef50_C9M6M1 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6M1_9BACT Length = 881 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 112/723 (15%), Positives = 211/723 (29%), Gaps = 165/723 (22%) Query: 144 SYAAVKQLEGKYLVQNRVTGEIYESAQ----FLYILVAACLFSNY---PRETRLQY---- 192 S A L +Y + + + V+ L ++ E+ + + Sbjct: 43 SENARWLLAQRYCLDRWDDELKACRPERGIEEVARRVSRVLAASETAYAPESEIGWIRTL 102 Query: 193 VKRFYDAVSTFKISLPTPIMSGVR--------------------------------TPTR 220 K + + F+ +P + G T + Sbjct: 103 EKNLFSDILNFQFLFNSPCLYGCGAGLTVQPQWSRIIYCSPDELSWEDYRRLAEGRTANQ 162 Query: 221 QFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRG-GEAFHTGCI 279 Q +C ++ DS++ I G+G N G +R G+PI+G +G + Sbjct: 163 QLFACFVVSVPDSIEGIFDAVKDAAIISKYGGGVGANFGHLRESGAPIKGGTGGKASGPV 222 Query: 280 PFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQI 339 F + + T QGG R A P H ++E + K G R+ + + V + Sbjct: 223 SFMETWNTMGSVVVQGGRRRAALMGMLPDNHPDIERFMDAKTEDG----RLPYFNISVCV 278 Query: 340 NKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELF 399 + + +G D L S + D V A +L+ Sbjct: 279 SDRLVNAAREGGDFPLVS--------------------------RVDGKTAATVPAAQLW 312 Query: 400 SLMMQERASTGRIYIQNVDHCNTHSPF-DPAIAPVRQSNLCLEIALPTKPLNDVNDENGE 458 + G + +D + + + +N C E LP Sbjct: 313 DKLCSNAWRRGDPGVFFIDRAGADNLLREDPEFVIESTNPCGEQPLP------------N 360 Query: 459 IALCTLSAFNLGAI----------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAM 508 C L + NL A + + ++ LD ++D YP+ R Sbjct: 361 YTSCNLGSINLSAFVAPDGSGQLAFDEARFVDQVYRSMVYLDLVIDSCSYPLERIGRRTR 420 Query: 509 GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWF 568 R +G+G++ + G Y + + + L A+ + G P+ Sbjct: 421 QIRPVGLGLMGLSDAAIASGLVYGSPEFSGFCDRLASVMAVCALLATVDSVDHLGKEPFA 480 Query: 569 NETTYAKGILP-IDTYKKDLDTIANEPLHYDWEALRE--SIKTHG--------------- 610 + K P D DL + LR +K G Sbjct: 481 ASSAVVKLFAPLRDELGGDLFMSQTMETLDEEGFLRVVGRMKELGLPYTLCNTLQAAPGV 540 Query: 611 -----------------------LRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS 647 +RNS ++ P+ + S + +A+ GIEP + + Sbjct: 541 LKRLEGGSPEELRRLLGAVLGGRMRNSRRLSIAPTGSISMLLDASAGIEPNFAWSWNRKV 600 Query: 648 K--DGILRQVVPDYEHL----------------HDAYELLWEMPGNDGYLQLVGIMQKFI 689 DG + + L + +++ +G++++ GI +++ Sbjct: 601 MKSDGNGYETRQYFHRLVTDEGKRQLSAGGKLEDPRFVTAYDLS-PEGHVEVTGIFARYV 659 Query: 690 DQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVP 747 D IS N S + + Y G K T+Y +R Sbjct: 660 DSGISKTVNLPSS------ATVDDVKAVYERCYDLGCKGITIYRDGSRSEQPIEVSKPAE 713 Query: 748 SIQ 750 Sbjct: 714 KAA 716 >UniRef50_A0MN59 Ribonucleotide reductase alpha subunit n=1 Tax=Thermus phage phiYS40 RepID=A0MN59_9CAUD Length = 797 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 149/803 (18%), Positives = 273/803 (33%), Gaps = 156/803 (19%) Query: 68 DLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEE 127 DL Y A R+ ++ D K +E G+ +N L ++ Sbjct: 3 DLARYKEELYGSEALRVLFDKIKSNFEED------VDTFEKFLEYGEPENALTKEEINNV 56 Query: 128 FKQMDTF--IDHDRDMTFSYAAVK----------------QLEGKYLVQNRVTGEIYE-- 167 F +++ I+ +D S+ VK + KY +++ Sbjct: 57 FTELEKLGLIEEIKDELSSFYKVKKEDLIDGFFVQNISSEIYKQKYQLKDGKNKNELVDL 116 Query: 168 SAQFLYILVAACLFSNYPRETR-------------LQYVKRFYDAVSTFKISLPTPIMSG 214 + ++ VA + R ++ + F+ ++T + + +MS Sbjct: 117 TPYHTFVRVALAVALVNARYSKRLEKYGLDAFKTFVDDFLSFFYILATGRSTGAGRVMSN 176 Query: 215 VRTP----TRQFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIR 269 + +C ++ + DS+ I T + + AG G + IR G+ + Sbjct: 177 AGSKLYKTYTTLINCTVMRQIPDSMHGIMETLTEASLTLKAGAGTGYDFSSIRPKGAFVH 236 Query: 270 GGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNR 329 G A +G + F + F + G R GA L + H E L + K N GV Sbjct: 237 GAGAETSGVVSFAEIFDKMCSTIMSAGGRRGAQMLVIDVRHPESIDLFMAKRNDGV---- 292 Query: 330 VRHMDYGVQINKLMYTRLLKGED-----ITL---FSPSDVPGLYD---AFFADQE----E 374 +R+ + + + ++ E+ T F+PS+V F D+E E Sbjct: 293 LRYFNISLLFPNSLMEKVKNDEEFEQWFWTFEMTFTPSEVIEKNGNNVFFIGDKEVVIVE 352 Query: 375 FERLYTKYEKDD-------------------------SIRKQRVKAVELFSLMMQERAST 409 +L +YE+ D +RV+A E++ ++MQ Sbjct: 353 NGKLPYEYEEYDYFAFGEDHQVMKYENFGKDKYRIYKKEVFKRVRAREIYDIVMQSTYDY 412 Query: 410 GRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL 469 I +D+ N + +R +N C E LP C L + L Sbjct: 413 AEPGIIFIDNVNNKNVLKGKEY-IRATNPCGEQPLPP------------YGSCNLGSIFL 459 Query: 470 GAI--------------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGI 515 + D+L E++ L R LD + D + P+ K A +R G+ Sbjct: 460 HRFVKEPFNYDLKPEENFDFDKLFEVSRLMNRFLDFVNDITNLPLVQLKEAAFTKRRHGL 519 Query: 516 GVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAK 575 G+ A L G RY A K IQ + +A G P T + Sbjct: 520 GISGIADTLIMVGLRYGSEEAAKFLEKIMYTIQLASAVENVRMADIYGPAP--VGVTLKE 577 Query: 576 GILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISN--ATN 633 + K+ L+ I E LR S ++ P+ T S N Sbjct: 578 WVDVFGHLKEKLEEIYG-----------EDFYKLPLRYSHAISIAPTGTISLTFGNNVAN 626 Query: 634 GIEPPRGYVSIKASK----DGILRQVVPDYEHL-----------HDAYELLWEMPGNDGY 678 GIEP ++ + ++ V + + ++ + ++ D + Sbjct: 627 GIEPTFALSYMRNIRLPGKKTKTQEEVYSFAAILFKNYFGHTNYNEYFVTTNDI-TVDEH 685 Query: 679 LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 +++ QK++D +IS N P + + + AY+ G+K T + N + Sbjct: 686 IRMQASAQKYVDSAISKTCNVPT------DYPFEMFKEAYIKAYELGLKGFTTFRFNPKF 739 Query: 737 --GAEDAQDDLVPSIQDDGCESG 757 G +DDL + + ++G Sbjct: 740 SVGVLVKKDDLENLLIEFETDTG 762 >UniRef50_Q5L9C8 Ribonucleoside-diphosphate reductase n=26 Tax=Bacteroidetes RepID=Q5L9C8_BACFN Length = 882 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 123/710 (17%), Positives = 237/710 (33%), Gaps = 133/710 (18%) Query: 123 YTEEEFKQMDTFIDHD-RDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF 181 E++ + + R A + KY V++ +S + ++ +A + Sbjct: 35 IVEKQIYSYEEAFEESLRYFQGDELAARVWVNKYAVKDSFGNIYEKSPKDMHWRLANEVA 94 Query: 182 SNYPRETRLQYVKRFYDAVSTFKIS-LPTPIMSGVRTPTR--QFSSCVLIECG---DSLD 235 + ++ ++ FK M+G+ + S+C +I DS Sbjct: 95 RIEAKYPNALSSEQLFELFDHFKYIVPQGSPMTGIGNDYQVASLSNCFVIGIDGSADSYG 154 Query: 236 SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQG 295 +I V+ + +R G+G + IR GSP++ TG +PF + + + + +Q Sbjct: 155 AIIKIDEEQVQLMKRRGGVGHDLSHIRPKGSPVKNSALTSTGLVPFMERYSNSTREVAQD 214 Query: 296 GVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITL 355 G R GA L + H + E+ + K G +V + V+++ + ++G T Sbjct: 215 G-RRGALMLSVSIKHPDSEAFIDAKMTEG----KVTGANVSVKLDDAFMSAAVEGRKYTQ 269 Query: 356 FSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQ 415 P + D + ++A L+ ++ + + Sbjct: 270 QYP-----------------------IDSDHPTTVKEIEASNLWKKIVHNAWKSAEPGVL 306 Query: 416 NVDHCNTHSPFD---PAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI 472 D S D +N C EI L P + + ++ F A Sbjct: 307 FWDTIIRESVPDCYADLGYKTVSTNPCGEIPL--CPYDSCRLLAINLYSYVVNPFTKDAY 364 Query: 473 NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGR---------------------- 510 + D + LA R +D ++D + +R Sbjct: 365 FDFDLFHKHVALAQRIMDDIIDL---ELEKIERIIEKIDQDPENEEVKHTERGLWEKIYK 421 Query: 511 -----RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGAC 565 R G+G+ LA G RY A + K +A+ ++S ++AKE+GA Sbjct: 422 KSGQGRRTGVGITAEGDMLAALGMRYGTEEATEFSEKVHKAVALGAYRSSVDMAKERGAF 481 Query: 566 PWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETS 625 ++ + + L AL E +K +G RN + P+ T+ Sbjct: 482 DVYDSER-------------EKNNPFINRLREADPALYEDMKKYGRRNIACLTIAPTGTT 528 Query: 626 SQISNATNGIEPPRGYVSIKA---------SKDGILRQVVPDYEHL---HDAYELLWEMP 673 S ++ T+GIEP V + + + + +E H + E Sbjct: 529 SLMTQTTSGIEPVFLPVYKRRRKVNPNDTNVRVDFVDETGDAFEEYIVFHHKFVTWMEAN 588 Query: 674 GNDG------------------------------YLQLVGIMQKFIDQSISANTNYDPSR 703 G D +++ G +QK++D SIS N Sbjct: 589 GYDPAKRYTQEEIDELVAKSPYYKATSNDVDWLMKVRMQGKIQKWVDHSISVTINLP--- 645 Query: 704 FPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQD 751 V + + + + A+K G K T+Y +R G + ++ Sbjct: 646 ---NDVDEELVNRLYVEAWKSGCKGCTVYRDGSRSGVLISAKSDKDKKEE 692 >UniRef50_B4D0S2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Verrucomicrobia RepID=B4D0S2_9BACT Length = 1043 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 117/797 (14%), Positives = 237/797 (29%), Gaps = 153/797 (19%) Query: 82 ARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDM 141 R+ + R++ + ++ H + T++ K + + Sbjct: 18 GRVPVAATRRRPQEGLKFARVFSQKTIAPFDEIEWEHRTAEITDDSGKAIFKQESVEVPK 77 Query: 142 TFSYAAVKQLEGKYLVQN------RVTGEIYESAQFLYILVAACLFS---NYPRETRLQY 192 ++S A K KY + G S + L V + + Sbjct: 78 SWSALATKIAVSKYFYGDIANGTDPYKGGRECSVRQLVHRVTRTITDCGIKDGYFADQES 137 Query: 193 VKRFYDAVS----TFKISLPTPIMSGVRT------------------------------- 217 + FY+ ++ + +P+ V Sbjct: 138 AEIFYNELTWLCVNQHGAFNSPVWFNVGLWHQYHTGEGRGEGNYFYNHKTGQAQRAATQY 197 Query: 218 PTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTG 277 Q S+C + D+++ I + + +G G + +R+ + G +G Sbjct: 198 EYPQGSACFIQSVDDNMEDIMRLAMSEAMLFKYGSGTGSDLSTLRSTREKLSG-GGRPSG 256 Query: 278 CIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYG 336 + F K + GG R A WH ++E + K + + Y Sbjct: 257 PLSFLKVYDQVANVVKSGGKTRRAAKMNTLKDWHPDIEEFIEAKTKEEKKAWALIEQGYD 316 Query: 337 VQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAV 396 N Y I + + + D F E + +TK D +++ +A Sbjct: 317 GSYNGDAY------GSIMYQNENLSVRVSDEFMNAAVEGKEWWTKRVTDGKPCEKK-EAK 369 Query: 397 ELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDEN 456 L + + G +Q + +N C E Sbjct: 370 ALLRKIAEGTHLCGDPGVQFDTTIDKWHTCK-GTGRQNSTNPCSEYLF------------ 416 Query: 457 GEIALCTLSAFNLGAI------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGR 510 + C L++ NL +++ + + + A + ++D YPI + Sbjct: 417 LDNTACNLASLNLLKFKKADGGFDVERFKAAVRVFITAQEIIVDNASYPIKEIAENSHIF 476 Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNE 570 RTLG+G N + +G Y L + + + S +LAK G P + + Sbjct: 477 RTLGLGYANLGALIMSYGLGYDTDEGRALAGAITSIMTGHAYEQSAKLAKTMGPFPGYKD 536 Query: 571 TTYAKGILPIDTYKK--------------------DLDTIANEPLHYDWEALRESIKTHG 610 T + +D+ + D E W+ K HG Sbjct: 537 TRASGVKKTVDSTNESYMLEVIDLHRSHVSRIQDSDRFGYLKEEAQKCWDGALAQGKKHG 596 Query: 611 LRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPD----------- 658 RN+ ++ L P+ T + + T GIEP V K G + ++V Sbjct: 597 YRNAQVTVLAPTGTIGFLMDCDTTGIEPDIALVKYKLLAGGGMLKIVNQTVKPALQNLGY 656 Query: 659 ----------------------------------YEHLHDAYELLWEMP------GNDGY 678 EHL ++ ++ G+ Sbjct: 657 SFAEIEGVVAHIDKFDTIEDVTDEDGTTIPSGLKPEHLP-VFDCAFKPHRGSRSLHYRGH 715 Query: 679 LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGA 738 ++++ Q F+ +IS N + ++ ++ + ++ G+K + DG+ Sbjct: 716 IRMMAAAQPFLSGAISKTVNLPE------EATVEDIVNTYVEGWQLGLKAIAIYR--DGS 767 Query: 739 EDAQDDLVPSIQDDGCE 755 + + V +D G Sbjct: 768 KRSAPLNVKKTKDMGTA 784 >UniRef50_Q6VMN2 Ribonucleoside-diphosphate reductase n=10 Tax=Tortoise herpesvirus RepID=Q6VMN2_9HERP Length = 796 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 153/718 (21%), Positives = 261/718 (36%), Gaps = 119/718 (16%) Query: 128 FKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRE 187 + + + + T + + E YL + +ES + +AA + ++ R+ Sbjct: 109 LTNFYSGLAYYKIKTLGLMSAMKYEDFYLTK--FQNGTHESIGQFFTRIAATVATHIHRD 166 Query: 188 -------------TRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG--D 232 + Y F++ +S I PTP M + R +SC L++ Sbjct: 167 MPQYGLLIPMMERSWFNYFDYFFNLLSHNIIIPPTPAMLFMGRKNRSLASCYLLDPPQKT 226 Query: 233 SLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSC 292 +L++++A + I+ ++ R GIGIN E G + K T V Sbjct: 227 TLEAMSAVAQDIIPILNHRGGIGINVNDYNQTP-----REGRKLGFLGLAKLIDTCVLLS 281 Query: 293 SQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGN-RVRHMDYGVQINKLMYTRLLKGE 351 + R +F W+ +VES L +K +E + R ++ + I L R + Sbjct: 282 NSDSERPTGVCMFMEPWNADVESFLGIKGLTTLEHHLRCDNIFNALWIPDLFMKRYMADP 341 Query: 352 D--ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERAST 409 + +LF L + +EFE Y + E +++ EL +++ T Sbjct: 342 NTTWSLFD-DRCNHLAKLY---GKEFEDEYHRLETAGMAV-RQMPIKELLFKIIRSAIMT 396 Query: 410 GRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL 469 G +I D CN H D +R SNLC EI T+P +D +C L NL Sbjct: 397 GSPFIMFKDSCNRHYYMDTQGQAIRGSNLCTEIIHHTEPDSD--------GVCNLMNVNL 448 Query: 470 GAI--------------------------------NNLDELEELAILAVRALDALLDYQD 497 A N ++L E A ++ ++D Sbjct: 449 PAFLTLSFNKETYCLSDDTLWQEHNKFCTPGGHRYFNFEKLTEAVTAATIFINVMIDRSV 508 Query: 498 YPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNE 557 +P + GA R++GIG G+ A L EA+ +ASNE Sbjct: 509 HPTTKTQNGAKNFRSMGIGFQGLNTLCWILGETLVTPKARKLGKTICEAMYLSAAEASNE 568 Query: 558 LAKE-QGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTL 616 L + F+E+ YA+GI+ D + D + + W ALR I +GL NS Sbjct: 569 LCQLGLSPFKRFSESRYARGIMHFDAW----DNVGSLTFQDRWSALRPKIIKYGLYNSQF 624 Query: 617 SALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY----------------- 659 ALMP+ +SSQI+ ++ P + K S +G + Sbjct: 625 IALMPTVSSSQITESSEAFYPVFTNLYSKLSVNGETVKPNVMLLRDLGSVFKGKDYTDAL 684 Query: 660 -------------------EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYD 700 +H Y +E + L+L F+D S S + Sbjct: 685 EKLERHKWVVGEAFPDLPTDHAIRKYLTAFEYD-QNTLLELTADRAPFVDHSQSNTLYFL 743 Query: 701 PSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDDGCESG 757 + P + + ++ L+TAYK G+KT +YY + + + + C + Sbjct: 744 EGKTP---ISAKYIMNHLVTAYKLGLKTGMYYCRIKKATDASIFMC---AGQEICSTC 795 >UniRef50_C1XXN0 Ribonucleoside-diphosphate reductase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XXN0_9DEIN Length = 1014 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 104/618 (16%), Positives = 193/618 (31%), Gaps = 140/618 (22%) Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFY-KHF 285 ++E D + I T+ V + ++ +R G+PI+G +G + F + F Sbjct: 211 VLEVPDDMGGIIDTARDAVAMAGKGQEPHVDFSLLRPEGTPIKGSGGTSSGPVSFLLEIF 270 Query: 286 QT------------------------AVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK- 320 ++ QGG R GA + H ++ L K Sbjct: 271 DNFLEWGNLGAEKSGPVATLRYVYSPVLRVVRQGGTRRGAGMATLSIDHPDLLDFLTAKD 330 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 +R + + + + + + L P++VPG Y + E L Sbjct: 331 LDREAAEGDISTFNISILVTEAFWNTLQADGLWA-VEPAEVPGKYYPYLVQGEYTGALPE 389 Query: 381 KYEKDDS------IRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP--AIAP 432 +++ + + +V A L+ + +TG + VD N S Sbjct: 390 LPDREVDGARAIPVYEGKVPAKWLWHEIAWHAWATGEPGLIFVDRINELSALKHLGERYR 449 Query: 433 VRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------NNLDELEELAILAV 486 +R +N C EI L C L A NL A + + Sbjct: 450 IRATNPCGEIPLTVGEP------------CDLGAINLAAYVREDKTFDYATFRADVRTCI 497 Query: 487 RALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA 546 R LD +LD + + + + R LG+GV+ A L K G YS K A Sbjct: 498 RFLDNVLDVNVFALEDNRIASQSLRRLGLGVMGLADALIKMGLPYSSEEGRQAVAKIMNA 557 Query: 547 IQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESI 606 ++ + AS L +E+G P + + + + + Sbjct: 558 MREEAILASERLGEERGVFPIYAQ--------HPEKFPEIRP------------------ 591 Query: 607 KTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD----------------- 649 RN + + P+ T+S + ++GIEP + Sbjct: 592 ----RRNVAVLTVAPTGTTSMLMGVSSGIEPMFSPFMWRRIGGQYKALLHPLFVEQMEKY 647 Query: 650 -------------------------GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGI 684 G +R + + +E ++P D ++++ G+ Sbjct: 648 PPTPPFEKEGAWDWDKLIEAIQAHHGSVRGIEGIPTEIQAVFEGAHDVPPLD-HVRMQGV 706 Query: 685 MQKFID------QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 +Q+ D S+S N + + + AY G K T+Y +RD Sbjct: 707 VQRAFDAFGLAANSLSKTINLP------NQATVADVEAAYTEAYLTGCKGITVYRDGSRD 760 Query: 737 GAEDAQDDLVPSIQDDGC 754 + ++ Sbjct: 761 LQVLSVSKSEKKETNEST 778 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 22/186 (11%), Positives = 50/186 (26%), Gaps = 32/186 (17%) Query: 137 HDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRF 196 + F A +YL ++ ++ VA + E R + + F Sbjct: 2 EFKPGHFDDHAQAIARRQYLQESDGD------VLGMFRRVADWVAGAEKPEARAYWSEEF 55 Query: 197 YDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC----GDSLDSINATSSAIVKYVSQRA 252 + +++ + +++G T +C + S + + + + Sbjct: 56 FRLMASKRFCPGGRVLAGAGTRHGNVLNCFVQGATENDPSSFNGVLEVAKKLALVTKVGG 115 Query: 253 GIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLE 312 G G+N GG G R + H + Sbjct: 116 GNGVNLDPYPPR----HGGAGKAAGP------------------RRTVRGFAYLRADHPD 153 Query: 313 VESLLV 318 V+ + Sbjct: 154 VQDFIQ 159 >UniRef50_B9LSK3 Ribonucleoside-diphosphate reductase n=9 Tax=root RepID=B9LSK3_HALLT Length = 1056 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 139/839 (16%), Positives = 248/839 (29%), Gaps = 171/839 (20%) Query: 51 DGIKTSD----IHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHV 106 D + T + I T + D ++ +A + L AR + + P L+D V Sbjct: 4 DDVATDEVELPIKRTTGETLEDRLTANAY-HNILPARYLRKNADGEPIE--NPEGLFDRV 60 Query: 107 VKMVEMGKYDNHLLEDYTEE-EFKQMDTFIDHDRDMTFSYAAVKQL-EGKYLVQNRVTGE 164 + V + E + E + D A G + T Sbjct: 61 ARNV---ALAEAVFEAEKQGVEVTVTPDQLKPDHPRR-DELAADVFGTGTTATDDVETTL 116 Query: 165 IYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSS 224 + RE RF D + + +P + +Q S+ Sbjct: 117 TAHNVNKFAYSTVVPELPEGVREHVEATADRFRDGMESLSFMPNSPTLMNAGDELQQLSA 176 Query: 225 CVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKH 284 C + D + I+ T+ + G+G ++R G + +G I F + Sbjct: 177 CFVDSPADDITDIHQTAKEAAEVFQSGGGMGYAFWKLRPYGDAVGSTGGIASGPITFMRT 236 Query: 285 FQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVR------------- 331 F ++ +QGG R GA + H +V + KN + +R Sbjct: 237 FDQMCETIAQGGARRGAQMGVMRVSHPDVIQFIHSKNKDVSLAHSLRLNDPDDFTHNSFA 296 Query: 332 -----------------------------HMDYGVQINKLMYTRLLKGEDITLFSPSDVP 362 + + V + L E+ T +P Sbjct: 297 DALEEARELIDEDGKVPEHLRNAVEGHLSNFNISVGVTDDFMEALYNDEEFTFTNPRT-- 354 Query: 363 GLYDAFFADQEEFERLYTKYEKDDSIRKQRV---KAVELFSLMMQERASTGRIYIQNVDH 419 + E + +Y + + + V A EL+ M++ G + ++ Sbjct: 355 ---EEPHIATPETKEIYDMFGLGEHVEVGEVLSIPADELWDDMIEGAHENGEPGVIYLER 411 Query: 420 CNTHSPFDPAIAP---VRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL------- 469 N FD P + +N C E L E C L NL Sbjct: 412 VNKEHSFDTKEHPDHRILATNPCGEQPL------------EEYEACNLGHINLSTLAAQD 459 Query: 470 ----------------------GAI----NNLDELEELAILAVRALDALLDYQDYPIPAA 503 A + +E +E R L+ ++ D+P+ Sbjct: 460 APDWRVWSDEHADEYDTEEAAMSAFLEEAIDFEEFDERIDYGTRFLENVVTMSDFPVEKI 519 Query: 504 KRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG 563 ++ R +G+GV+ A + G +Y N + + I + + S+ELA E+G Sbjct: 520 EQKVRDMRKIGLGVMGLAQLYIQLGIQYGTEPGNEVARQLMTHINHASKQTSHELATERG 579 Query: 564 ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSE 623 + E+ YA D ++ A+E WE +RN + + P+ Sbjct: 580 TFNDWEESKYANPTEYRDWFEHYTGLDADE-----WED------GFPIRNHNTTTIAPTG 628 Query: 624 TSSQISNATNGIEPPRGYVSIKASKD----------------GILRQVVPDYEHLH---- 663 T+S I N T G EP K D L + D + + Sbjct: 629 TTSMIGNTTGGCEPIYNVAYYKNVSDDVQGDEMLVEFDDYFLRTLEENDVDVDAVKQEAQ 688 Query: 664 -----------DAYELLWEMPGN----------DGYLQLVGIMQKFIDQSISANTNYDPS 702 D E + + G + + Q+ +D +IS N+ Sbjct: 689 EQMATNEFDGVDGLETVPDAIGELFVVTGDLSGKQHASVQCACQEGVDSAISKTCNFP-- 746 Query: 703 RFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDGCESGAC 759 +++ + Y G K T+Y TR D+ + A Sbjct: 747 ----NDATAEEMEEVYRYIYDHGGKGVTVYRDGTRSKQVLTTRAKNAEFADESEAAEAI 801 >UniRef50_A7IY07 Ribonucleoside-diphosphate reductase n=3 Tax=Chlorovirus RepID=A7IY07_PBCVN Length = 1103 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 136/474 (28%), Positives = 218/474 (45%), Gaps = 38/474 (8%) Query: 1 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHN--------------VSISQVELRSH 46 MN+ ++V KRDGS E I+ DKI + + +++ V +S++ Sbjct: 6 MNRLMVVLKRDGSKENISFDKILQRIQRLCWPINSKPVYKGSRAMTGLSVDVSKIVASVC 65 Query: 47 IQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHV 106 DGI T + E +A + + + PDY LAAR+++ +L+K+ + + Y + Sbjct: 66 ASIVDGISTVQLDELTADKSASMTT-EHPDYGILAARISVSNLQKQTHDK--ITDAYAEI 122 Query: 107 VKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIY 166 ++ ++ E+ + +FID+DRD F Y K +E YL + V +I Sbjct: 123 AHLLSND------FKENIEKHADEYQSFIDYDRDYDFDYFGFKTMERLYLTK--VNNKIV 174 Query: 167 ESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCV 226 E Q +Y+ VA L+ + + VK YDA+S K + +P + Q +SC Sbjct: 175 ERPQHVYLRVAIGLWG-----SDIARVKETYDALSCRKFTHASPTLFNAGFKKAQLASCF 229 Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQ 286 L+ DSL I + G+GIN IR GS I G G +P K F Sbjct: 230 LVTVEDSLGDIYKVLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPMLKVFD 289 Query: 287 TAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR 346 T +QGG R G+ ++ H +V L++K N+G E R R++ Y V +N L R Sbjct: 290 TTSAYANQGGRRKGSFAIYLEPHHSDVMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKR 349 Query: 347 LLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQER 406 + +LF PS+ PGL DAF +E+ LY +YE + K VKA ++++ M+ Sbjct: 350 VETDAQWSLFDPSECPGLTDAF---GDEYAELYERYEAEGK-AKNVVKARDVWNTMVTTI 405 Query: 407 ASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLE---IALPTKPLNDVNDENG 457 TG+ Y+ N D N + +R SNLC+ L + + + D G Sbjct: 406 IETGQPYVSNKDAVNKKN-MQMNAGTIRGSNLCVAGDTKILTSSGYHPIKDMEG 458 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 77/375 (20%), Positives = 134/375 (35%), Gaps = 68/375 (18%) Query: 424 SPFDPAIAPVRQ--SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NNLD 476 + + + C EI T E A+C + + L + D Sbjct: 756 NEPKRHMGVFNGVITGQCNEIVEYTSKE--------ETAVCVIGSVVLKNYVKNDKFDFD 807 Query: 477 ELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 +L + + + LD +D YPI A+ RR +G+GV K Y A Sbjct: 808 DLRKNVKILAKNLDRSIDVMAYPIKEAETSNKLRRPIGVGVQGLQDVFFKLRFSYDSPEA 867 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 +L + FE I Y ++AS ELA+ G P F + +KGIL + + + Sbjct: 868 RDLNREIFEHIYYAAVEASVELAEIHGPYPTFEGSPASKGILQYHLWDVTPKS------N 921 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV 656 DW L E +K G+RNS ++ALMP+ +++QI + EP + + + G + Sbjct: 922 LDWRGLEERVKK-GIRNSLVTALMPTASTAQICGSVEAFEPITSNLYSRRTLAGEFPVIN 980 Query: 657 PDYEH--------------------------------LHDAYELLWEMPGNDGYLQLVGI 684 + Y+ W++ + + Sbjct: 981 SYLVRELIERGTWNEQMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSM-KSVIDMASD 1039 Query: 685 MQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL-YYQNTRDGAEDAQD 743 F+DQ+ S N ++ + L +K G+KTL YY ++ + Sbjct: 1040 RGAFVDQTQSMNLFLAQP-------TLKNVTSMLFYGWKSGLKTLQYYLRSKPASSAIAV 1092 Query: 744 DLVPSIQDDGCESGA 758 + D+ C + Sbjct: 1093 TI-----DNDCLVCS 1102 >UniRef50_C8WXT6 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WXT6_ALIAD Length = 1065 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 105/604 (17%), Positives = 191/604 (31%), Gaps = 121/604 (20%) Query: 226 VLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHF 285 + GDS +I T + + + + + +R S +RG +G + + Sbjct: 309 FCLSPGDSRSTIARTLGDMWEAMRDGKRVSLVLSSLRPRYSYVRGVNGRSSGAYSWGLLY 368 Query: 286 QTA--------------------VKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGV 325 + QGG R GA L H ++ + K GV Sbjct: 369 DKGNQVFGEGFGPVGVGEIMSVGCQLTLQGGSRRGALMLILNDRHADLPKFIRAKQVDGV 428 Query: 326 EGNRVRHMDYGVQINKLMYTRLLKGEDITL--FSPSDVPGLYDAFFADQEEFERLYTKYE 383 + + V +++ +GE L PS F EE + Sbjct: 429 ----ITGANISVGVSEEFMQAKRRGESWQLGFVPPSHREAFDGDFGRWLEEGK------- 477 Query: 384 KDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIA 443 + + A +L+ + + + + + N S P+ +N C E Sbjct: 478 --PFEVTETISAAKLWRDICESAWKSAEPGVVFLGRANAMSN-SWYFNPLVATNPCGEQP 534 Query: 444 LPTKPLNDVNDENGEIALCTLSAFNLGAINN----------------------------- 474 LP +C L A L N Sbjct: 535 LPP------------YGICNLGAVVLARFANGFRDSGVRTEFSDPEREAYVRSLLLEKFP 582 Query: 475 ------------LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAY 522 +ELE +R DA++D YP ++ M R +G+G++ Sbjct: 583 ADEAEFLLHHIRWEELELTTRRGIRFQDAVIDATYYPFEENRQNQMSERRVGLGIMGLHD 642 Query: 523 YLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDT 582 + G RY + L + + S ELAKE G P F+ + + Sbjct: 643 LMLYCGIRYGSEESVKLIDVLMGLMAEWAYLESVELAKEYGPFPKFDAEKFLQSGFMRHM 702 Query: 583 YKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYV 642 + + E+I+ HG+RN T + P+ T+ + + G EP + Sbjct: 703 AAERP-------------HVVEAIRKHGVRNVTTMTIAPTGTTGTMVGCSTGCEPYYAWS 749 Query: 643 SIKASKDGILRQVVPDY----------EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQS 692 + S+ G+ + E L + E+ + ++++ +Q++ID S Sbjct: 750 YFRNSRLGLFEEHAAIVEQYRREHPSEESLPPYFVTAMEL-TPEEHVRVQAALQRWIDSS 808 Query: 693 ISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQ 750 IS N S ++ +K AY+ G K T+Y +R + + Sbjct: 809 ISKTCNAPHS------YTVEDTVKLYDLAYELGCKGITIYRDGSRSEQVLSLKKDDQAGD 862 Query: 751 DDGC 754 +G Sbjct: 863 GEGA 866 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 107/354 (30%), Gaps = 66/354 (18%) Query: 61 TIIKAAADLISRDAPDY------QYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGK 114 I + ++ + DY + +A R + +RK+A V + + Sbjct: 2 AIEQRERPMLDLNDDDYLGPTGEKIVADRYLLKDIRKEALAPGALV-----VAVLDKKRA 56 Query: 115 YDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYI 174 Y + + Q+ + + + V L + S + ++ Sbjct: 57 YHELARVKAVDRDADQVTVELRDGSIVDLPVSQVDVL-------------LETSPRQMWR 103 Query: 175 LVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFS-SCVLIE-CGD 232 VA + + + + FY+ ++ I + + T + S +C +I G Sbjct: 104 RVARGAAAVTRQPE--VWEEAFYELQKGWRYVPGGRINASLGTGMQVTSYNCFVIPNVGP 161 Query: 233 SLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSC 292 L + ++ ++ G+G+N RI G+ I + Sbjct: 162 DLRDYAESFGQTLEIQARSGGVGMNLSRIPPQGTLI---------PVS------------ 200 Query: 293 SQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGED 352 R L WH ++ L + + R + + + ++ Sbjct: 201 --TASRKAELMLVLDAWHPDLVDFLETEYPHSTKLVRADA---------AFWRAVEEDDE 249 Query: 353 ITLFSPSDVPGLYDA-FFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQE 405 P YD + D + + R E+ R++A EL ++ Sbjct: 250 WVFRFPDTSVEGYDEKWAGDLDAWLRQGLPVEEHG-----RIRARELMEKILAS 298 >UniRef50_B6YRR4 Ribonucleoside-diphosphate reductase n=21 Tax=root RepID=B6YRR4_AZOPC Length = 867 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 123/684 (17%), Positives = 220/684 (32%), Gaps = 127/684 (18%) Query: 144 SYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKR-FYDAVST 202 A K KY +++ + ++ +A + + ++ + +S Sbjct: 17 DELAAKVFVDKYALKSNKGEYFESTPNEMHQRIAREIVRIEQKYPNPILTEKNILEVISD 76 Query: 203 FKI-SLPTPIMSGVRTPTR--QFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINA 258 F M G+ + S+C +I DS I T ++ + +R G+G + Sbjct: 77 FNYLIPQGGNMFGIGNSYQLTSLSNCFVIGNRTDSYGGIMRTDEEQIQLMKRRGGVGHDL 136 Query: 259 GRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLV 318 IR GSP+ TG +PF + + + + +Q G R GA L + H E+ES + Sbjct: 137 SHIRPRGSPVNNSAITSTGMVPFMERYSNSTREVAQEG-RRGALMLSMSVEHPEIESFID 195 Query: 319 LKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERL 378 K +E +V + V++ + P Sbjct: 196 AK----IEEGKVTGANISVKLTDEFMRAVESNRSFIQRFP-------------------- 231 Query: 379 YTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS----PFDPAIAPVR 434 + ++ + + A +L++ ++ + + D S D V Sbjct: 232 ---IDSENPQIIKEIDAKDLWNKIIHNAWQSAEPGVLFWDTILRESIPDCYIDSGFGTV- 287 Query: 435 QSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLD 494 +N C EI L P + + F A + D EE LA R +D ++D Sbjct: 288 STNPCGEIPL--CPYDSCRLLAINLYSYVKQPFKKEAEFDFDLFEEHVALAQRMMDNIVD 345 Query: 495 -------------YQDYPIPAAKRGAMGR-----------RTLGIGVINFAYYLAKHGKR 530 DY K R +GIG+ LA G R Sbjct: 346 LEVEKIDAILMKIISDYESDEIKHTEQLLWEKIRHKTLIGRRIGIGITAEGDMLAALGFR 405 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTI 590 Y A N + + + + +AS E+AKE+GA FN + + + Sbjct: 406 YGTEEATNFAERIQKVLALSVYRASVEVAKERGAFEIFN-------------IELEKNNP 452 Query: 591 ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG 650 L L E ++ G RN + P+ T+S +S T+GIEP V + K Sbjct: 453 FIHRLKEVDSQLIEDMQQFGRRNIACLTIAPTGTTSLMSQTTSGIEPVFLPVYKRRRKVN 512 Query: 651 ILRQVVP----DYEHLHDAYELLWEMPGNDGY---------------------------- 678 ++ D ++ Sbjct: 513 PSDEITKIDFVDEMGDSWVEYTVFHHKFVKWMEVQGYPTTRKYAQREIDALVAKSPYYKS 572 Query: 679 ----------LQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK- 727 +++ G +Q+++D SIS N + + + + A+K G K Sbjct: 573 TSNDVDWLQKVKMQGRIQRWVDHSISVTINLP------NETKEELVNYLYIEAWKSGCKG 626 Query: 728 -TLYYQNTRDGAEDAQDDLVPSIQ 750 T+Y +R+G I Sbjct: 627 CTVYRDGSRNGVLVTTSKENHKID 650 >UniRef50_Q66663 Ribonucleoside-diphosphate reductase n=8 Tax=root RepID=Q66663_EHV2 Length = 799 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 148/773 (19%), Positives = 277/773 (35%), Gaps = 110/773 (14%) Query: 58 IHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEP--PALYDHVVKMVEMGKY 115 I I A DL + +A RL F + ++A D + K V + Sbjct: 27 IDTLKISAGWDL------EANRMAGRLYHFVMGRRAPVDTRAYVTTFGDKLEKGVHRFLW 80 Query: 116 DNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTG---EIYESAQFL 172 DN ++ K +++R ++ + K++ Y+++ G +YESA + Sbjct: 81 DN---ARDIDDLCKDFQNGPEYERLISRGMLSAKRMYDTYVLRTEEGGGEGAVYESALQM 137 Query: 173 YILVA--------------ACLFSNYPRETRLQ----YVKRFYDAVSTFKISLPTPIMSG 214 Y +A + R++ + F+ +++ +S TP+M Sbjct: 138 YARMAAFFTCQCFAYPSLRKTVSEVEGGSGRMESGLDFFAYFFKILASQLVSCATPVMRS 197 Query: 215 VRTPTRQFSSCVLIECGDSLDS--INATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGE 272 +SC ++ S + ++A + + ++G+G+N + G ++ Sbjct: 198 AGLRQSYLASCFIMNPDMSTEDKTLSAVFRDLSPLLCSKSGVGMNLTNFSSGGKNVQSC- 256 Query: 273 AFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRH 332 + + V+ C+ +R + + +WH ++E L K E R + Sbjct: 257 ---------LRLINSQVEFCNDKNLRPVSVAAYMELWHEQIEEFLAAKLPENPE--RCQS 305 Query: 333 MDYGVQINKLMYTRLLKGED--ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRK 390 + GV + L + + D LFSP L + ++F+ Y + + + Sbjct: 306 IFQGVCVPGLFFRLYEQNPDSQWHLFSPKVGGHLAGLY---GDKFDEEYARLVRHG-LYS 361 Query: 391 QRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIAL-PTKPL 449 + A L ++ TG YI + D N H F+ + +NLC E+ P + Sbjct: 362 SSLPAKSLMFALISAIIKTGSPYILSKDAINRHHWFETQGNAISYANLCAEVVQQPHEFT 421 Query: 450 NDVNDENGEIALCT--------------------LSAFNLGAINNLDELEELAILAVRAL 489 + N N + C LS D L AV + Sbjct: 422 STCNLANVCLPACLRARGEGEGAGAAGEGEGADRLSPLTPDLEFCFDTLRAAVRAAVYMI 481 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 +A + P P + R+ GIGV A AK G+ Y D + L + FE + Y Sbjct: 482 NASILGGVCPTPGVRVM-QAERSAGIGVQGLADVFAKLGRGYMDAESALLDARIFEVMYY 540 Query: 550 YLLKASNELAKEQGACP--WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIK 607 ++ASN+L GA P + + ++G +++ D++ E WE LRES+ Sbjct: 541 QAVRASNQLVTVGGAPPHANWKNSKLSRGEFHWESWGVQYDSLFIE--RQLWEELRESVT 598 Query: 608 THGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD------------------ 649 HG NS ALMP+ +SQ++ + P VS K S Sbjct: 599 KHGTFNSQFIALMPTAGTSQLTGLSESFYPFYANVSSKVSNKEEVMKPNITFLERVSPSD 658 Query: 650 --------GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDP 701 G + ++ P + + ++ D ++ F+DQS S + Sbjct: 659 VPLLKYHGGDVSKLPPPLAAKYRNFLTAFDYSPEDQ-IRRAAARSPFVDQSQSFSFFLKE 717 Query: 702 SRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDDG 753 + + +L + G+KT +YY + + + + Sbjct: 718 ANVK----SASYVKNLILLGHGLGLKTIMYYCRIQKQTSLTALECLQCTESPD 766 >UniRef50_B7KJK7 Ribonucleoside-diphosphate reductase n=4 Tax=Cyanobacteria RepID=B7KJK7_CYAP7 Length = 1123 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 128/447 (28%), Positives = 216/447 (48%), Gaps = 18/447 (4%) Query: 2 NQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHET 61 + V KRDGS +N+ KI V++WA G V+ +E + +GI T +I + Sbjct: 34 TSKIQVVKRDGSKAALNIAKIREVVEWACVGKD-VNPIALEAGLTTRLRNGITTREIQDN 92 Query: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKKAY--GQFEPPALYDHVVKMVEMGKYDNHL 119 +I A ++ S + PD++Y+A RL I+ L K ++ V ++ +YD + Sbjct: 93 LINCALEMCSPEEPDWRYVAGRLHIWSLWKDTLANRGYQYGNYDQTVKTKIDHNQYDRRI 152 Query: 120 LEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAAC 179 L Y+ EE ++ T+I+ D D + YA L +YL+ + E Q + A Sbjct: 153 LV-YSSEELQEAGTWINSDWDTDYDYAGAVLLTSRYLLPD-------ELPQEALLTCALL 204 Query: 180 LFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINA 239 L S E RL++ ++FY+A++ +ISL TPI++ +R P +SC + D+L+SI + Sbjct: 205 LASVETPENRLKWARKFYEAIAKRQISLATPILANLRVPNGSLTSCFISAIDDNLESIFS 264 Query: 240 TSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRG 299 + K G+GIN RIRA GS + G IP+ K + +QGG R Sbjct: 265 EVTNTAKISKNGGGVGINVSRIRATGSWVMNKPNASGGVIPWIKILNDTAIAVNQGGRRA 324 Query: 300 GAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPS 359 GA T+ +WHL+V L ++ G + + + + + R++ ++ TL P Sbjct: 325 GAVTISLDIWHLDVPEFLEMQTENGDQRRKAYDIFPQLVMADEFMRRVIHKQEWTLVDPY 384 Query: 360 DVPGLYDAFFAD--QEEFERLYTKYEKD----DSIRKQRVKAVELFSLMMQERASTGRIY 413 ++ + A+ EEFE++Y+K E + +RV A ELF +M+ + TG Y Sbjct: 385 EIRTKFGVELAELWGEEFEQVYSKIETAIHNGEITLYKRVNARELFKHIMRSQLETGMPY 444 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCL 440 + D N +P + + NLC+ Sbjct: 445 LAFKDTINRANP-NKHEGYIPGVNLCV 470 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 81/350 (23%), Positives = 136/350 (38%), Gaps = 29/350 (8%) Query: 417 VDHCNTHSPFDPAIAPVRQ--SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN 474 D + + + C E KP E C L + NL + + Sbjct: 794 RDDTYCFNEPLRHLGMFNGILTGQCTESFSNVKPG-------LESHCCNLVSLNLANL-D 845 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 +LE+ +AVR LD +D P AAK RT+G+G + A +LAK Y Sbjct: 846 NSDLEDTCKIAVRLLDNTIDLTHPPFEAAKNHNNLYRTIGVGCMGLADWLAKRRLSY--- 902 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP 594 FE I Y+ +S EL++E+GA F + +++G L + A+ P Sbjct: 903 EHLTDISHLFEEIGYWCTLSSMELSQERGAYACFPGSDWSQGKLIGSKPVEWFIENAHHP 962 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQ 654 W L E I+ +G+RNS ++A+ P+ +SS + T + P G + Sbjct: 963 ER--WAKLAEDIQLYGIRNSHITAIAPNTSSSLVQGCTASVLPVYSRFFYDKWAKGAVPI 1020 Query: 655 VVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYD------PSRFPSGK 708 P + Y + + ++ + +MQ++ID IS ++ P Sbjct: 1021 APPFIKESFWFYPE-NKTYDQNKVVKAIAVMQQWIDTGISMELLFNLNQGVYFPEDPERF 1079 Query: 709 VPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 + + + L+ A++ G K +YY T D+ C S A Sbjct: 1080 LKAKDIYDTLILAWREGCKAVYYIRTVQ-------KDNFKDSDNSCSSCA 1122 >UniRef50_Q1J1T0 Ribonucleoside-diphosphate reductase n=3 Tax=Deinococci RepID=Q1J1T0_DEIGD Length = 1010 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 104/614 (16%), Positives = 183/614 (29%), Gaps = 155/614 (25%) Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF-YKHF 285 + D + I + A+ + I+ ++R G+PI+G +G + F + F Sbjct: 212 VQAVPDDMGGIIDAARAVAESAKVGVEPRIDLSQMRPEGAPIKGSGGTSSGPVSFLMEIF 271 Query: 286 QT------------------------AVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK- 320 ++ QGG R GA + H +V L K Sbjct: 272 DNFLEWANRGGETSGPINTLRYVYAPVLRVVRQGGTRRGAGMATIAIEHPDVLDFLTAKD 331 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 +R + + + +++ + L +VPG Y L T Sbjct: 332 LDREAAEGDISTFNISILVSEQFWQALEGDALWH-VDVQEVPGKYYLAPQSGPYDGHLPT 390 Query: 381 KYEKDDSIRKQR-------------------VKAVELFSLMMQERASTGRIYIQNVDHCN 421 E+ + + V A L+ + + +TG + VD N Sbjct: 391 LPERAEDGARGVPLYRGAPRGRSQPADARPGVPAKWLWDQIAEHAWATGEPGLIFVDRVN 450 Query: 422 THSPFDP--AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NN 474 HS +R +N C EI L C L A NL A + Sbjct: 451 EHSALKNLGKRYEIRSTNPCGEIPLTVGEP------------CDLGAINLAAYVQNSRFD 498 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 VR LD +LD + + + + R LG+GV+ A L K G RY Sbjct: 499 FAAFRADVRTCVRFLDDVLDVNVFALEDNRVASQDLRRLGLGVMGLADALIKLGLRYDSE 558 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP 594 + + A++ + S L +E+G P + Sbjct: 559 AGRAAIAEIMTALREEAVAESERLGQERGVYPVYERNA---------------------- 596 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD----- 649 + I RN + + P+ T+S + ++GIEP + Sbjct: 597 ---------QKIPHSPRRNVAVLTVAPTGTTSMLMGVSSGIEPVFSPFIWRKIGAEYRAL 647 Query: 650 --------------------------------------GILRQVVPDYEHLHDAYELLWE 671 G + + E L + + Sbjct: 648 LHPLFMELLNQYPPAANMDDGQGGWNWDRVTEAVSENHGSVVGLAFIPEALQQVFVCAHD 707 Query: 672 MPGNDGYLQLVGIMQKFID-------QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKF 724 + D ++++ G++Q+ D S+S N S + + AY+ Sbjct: 708 IKPLD-HVRMQGVVQQAFDAGGQHAANSLSKTINLPNS------ATVADVRAAYAEAYRT 760 Query: 725 GVK--TLYYQNTRD 736 G K T+Y +R Sbjct: 761 GCKGITVYRDGSRQ 774 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 52/181 (28%), Gaps = 36/181 (19%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVS 201 F A +YL ++ +A + + E R ++ +++YD ++ Sbjct: 11 NFDENAQHIARRQYLQPGDGD------ILGMFRRIADWVAAAEAPEARERWAQKYYDLMA 64 Query: 202 TFKISLPTPIMSGVRTPTRQFSSCVLI----ECGDSLDSINATSSAIVKYVSQRAGIGIN 257 + +++G T +C + +S D I + + G G+N Sbjct: 65 QKRFCPGGRVLAGAGTQHGNVLNCFVQGATEHAPESFDGIMEVAKKLALVTKVGGGNGVN 124 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 G P GVR ++ H +V + Sbjct: 125 LDVYTPR----------AQGSRP-------------DAGVR---GWVYMSAAHPDVGDFI 158 Query: 318 V 318 Sbjct: 159 E 159 >UniRef50_A5FCJ4 Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ4_FLAJ1 Length = 565 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 131/651 (20%), Positives = 238/651 (36%), Gaps = 154/651 (23%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKIS 206 + + L YL++ E+ + + R + + + F + + +S Sbjct: 28 SEQILNRGYLLKG-------ETVEGAIDRICTAAAR---RLYKPELKESFVEMIERGWMS 77 Query: 207 LPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGS 266 + +P+ + + T SC + D ++ I ++ G G +R GS Sbjct: 78 ISSPVWANMGTERGLPISCFNVHVPDKIEGITHKLGEVIMQTKIGGGTSGYFGELRERGS 137 Query: 267 PIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVE 326 + +G + F K F TA+ + SQGGVR GA + + H ++E L +K+ Sbjct: 138 AV-TDNGKSSGAVSFMKLFDTAMDTISQGGVRRGAFAAYLDIDHPDIEEFLKIKSI---- 192 Query: 327 GNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDD 386 GN ++++ G+ + ++ G+ Sbjct: 193 GNPIQNLFTGICVPDYWMQEMIDGDA---------------------------------- 218 Query: 387 SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP--FDPAIAPVRQSNLCLEIAL 444 ++++ +++ R G YI D+ N + P + + SNLC EI L Sbjct: 219 -------DKRQIWAKVLESRQQKGLPYIFFSDNVNKNKPQVYKDQNLRINASNLCSEIML 271 Query: 445 PTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDAL----LDYQ--DY 498 P+ E +C LS+ NL + E LA+ LDA+ ++ +Y Sbjct: 272 PSTH--------DESFICCLSSMNLELYEEWKD-TEAVKLAIFFLDAVLQEFIEKTEGNY 322 Query: 499 PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNEL 558 + AA + A R LG+GV+ + YL K+ + A T + F+ I KAS EL Sbjct: 323 YLSAANKFAKRHRALGLGVLGWHSYLQKNMIPFEGMEAKMKTTEIFKHISDKADKASQEL 382 Query: 559 AKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSA 618 A+ G E +K +G RN+T A Sbjct: 383 ARIYGEP--------------------------------------ELLKGYGRRNTTTMA 404 Query: 619 LMPSETSSQISN-ATNGIEPPRGYVSIKASKDGILRQVVPDYEHL--------------- 662 + P+ +SS I + GIEP G + + L Sbjct: 405 IAPTTSSSAILGQTSPGIEPFSSNYYKAGLSKGNFMRKNKYLKKLLEEKGLDNEEVWRGI 464 Query: 663 -----------------HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 D ++ E+ + +Q GI QKF+DQ S N N Sbjct: 465 MLNGGSVQHMSQLTQQEKDVFKTFKEISQLE-IVQQAGIRQKFVDQGQSLNLNIP----- 518 Query: 706 SGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCES 756 ++ ++ + + ++ A++ GVK+LYYQ ++ +++ + + CES Sbjct: 519 -AELAIKDVNRLMIEAWQQGVKSLYYQRSQS---VSKELVTSLVSCSSCES 565 >UniRef50_D1Y8J0 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8J0_9BACT Length = 894 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 118/767 (15%), Positives = 232/767 (30%), Gaps = 183/767 (23%) Query: 99 PPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYL-- 156 ++ + ++MG +N L+ +E A LE +Y Sbjct: 2 YKSMKERFRDSLDMGLLENPLVPRQSE--------------------NARWLLEQRYFAD 41 Query: 157 -VQNRVTGEIYE-SAQFLYILVAACLFSNYPRE---TRLQYVKRF----YDAVSTFKISL 207 G E S + V+ + + +++++R + + + Sbjct: 42 RYDPETGGLRKERSFEEFARRVSRIVCTAESLYRGADEIEWIRRLEKNLFADLVEGRFIF 101 Query: 208 PTPIMSGVR--------------------------------TPTRQFSSCVLIECGDSLD 235 +P + T +Q +C +I+ DS++ Sbjct: 102 NSPCLFASGAGMTRVPELAELIYRSPDEMELADYRRLYDGKTDNQQLFACFVIDIPDSIE 161 Query: 236 SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRG-GEAFHTGCIPFYKHFQTAVKSCSQ 294 I + A G+G N GR+R G+ I+G +G + F + + T Q Sbjct: 162 GIFDSVRAAAVISKYGGGVGGNFGRLRERGADIKGGTGGKASGPVSFMETWNTMGCVVVQ 221 Query: 295 GGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDIT 354 GG R A P H ++E + K G ++ + + V ++ + + Sbjct: 222 GGRRRAALMGMLPDDHPDIEQFMDAKTEEG----KLSYFNISVCVSDELVGAAREKRPFA 277 Query: 355 LFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYI 414 L S + + + V EL++ + Q G + Sbjct: 278 LRS--------------------------RANGKVVRTVSGDELWNKLCQNAWRRGDPGV 311 Query: 415 QNVDHCNTHSPFD-PAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI- 472 +D N + + +N C E LPT C L + NL Sbjct: 312 FFIDRANDDNLLKLSGDFDIESTNPCGEQPLPT------------YTSCNLGSVNLVKFV 359 Query: 473 ---------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYY 523 +++ + ++ LD ++D YP+ R +G+G++ A Sbjct: 360 RPDETGRQSFDMEGFMDQVYRSIYYLDLVIDATSYPLQRIGERTKRIRPVGLGLMGLADA 419 Query: 524 LAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW---------FNET-TY 573 G Y S + + L A+ + G P+ F E Sbjct: 420 AILSGDVYGSESFKSFCDSLGAHMAGAALMATVDAVAHMGKEPFSESFAVARLFEEEHRA 479 Query: 574 AKGILPIDTYKKDLDTIANEPLHY-----------------------------DWEALRE 604 G L + ++D + + + L Sbjct: 480 HGGELFARQWIDEMDLNSYREFIARMRTHGQVPYTLLNTLEILPDVLGDEALPELKRLMT 539 Query: 605 SIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG-----ILRQVVPDY 659 ++ LRNS ++ P+ + S I +++ GIEP + + +R+ Sbjct: 540 ALLEGKLRNSRRLSIAPTGSISMIFDSSAGIEPNFAWRWSRKVMKSDGDGWEVREYFHPL 599 Query: 660 EHLHDA-------------YELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPS 706 +A Y +++ + ++ + GI +++D IS N S Sbjct: 600 ITQKEADELRGSGVISDPRYVTAYDIS-PEQHVDVTGIFARYVDSGISKTVNL------S 652 Query: 707 GKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQD 751 + + K T Y G K T+Y +RD S + Sbjct: 653 SSATVDDVRKVYETCYDMGCKGITIYRDGSRDNQPIETKKESESKSE 699 >UniRef50_C1F6S8 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6S8_ACIC5 Length = 1083 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 122/781 (15%), Positives = 219/781 (28%), Gaps = 192/781 (24%) Query: 115 YDNHLLEDYTEEEFKQMDTFIDHDRDM----TFSYAAVKQLEGKYLVQNRVTGEIYESAQ 170 YD E T I +D+ +S A + KYL T E + Sbjct: 42 YDEVQWESRTAAITDAAGKTIFEQKDVEIPVDWSMTATNIVASKYLHGPLNTPERESGVR 101 Query: 171 FLYILVAACLFSN-------YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPT---- 219 L VA + E + + T K + +P+ V Sbjct: 102 QLVSRVAETVRDWGIKGGYFASEEDAAIFHDELAHLLITQKAAFNSPVWFNVGCDRLEPK 161 Query: 220 ------------------------RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIG 255 Q S+C + DSLDSI + +G G Sbjct: 162 SDAQNWHWNPHTCAVEFSVTGYRNPQCSACFINAVDDSLDSILTLAKTEGMLFKWGSGTG 221 Query: 256 INAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVE 314 N IR + G +G + F + F GG R A + + H ++ Sbjct: 222 TNLSPIRGSMEQLSG-GGTASGPLSFMRGFDAFAGVIKSGGKTRRAAKMVILNVDHPDIV 280 Query: 315 SLLVLKNNRGVEGNRV---------------------RHMDYGVQINKLMYTRLLKGEDI 353 + K + + ++ + V++N + K + Sbjct: 281 DFIECKMKEEAKAWALMREGYDGSSGPDSEAYSSIFFQNANNSVRVNDEFMRAVEKDGEF 340 Query: 354 TLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIY 413 T T+ KD + + KA E+ + + G Sbjct: 341 T-------------------------TRTVKDGAAV-KTYKAREIMHKIAEATWQCGDPG 374 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI- 472 +Q N + SN C E + + C L++FNL Sbjct: 375 MQYDSTINRWHT-SKNSGRINASNPCSEYMF------------LDNSACNLASFNLLKFM 421 Query: 473 -----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKH 527 ++ + + A++ L+D YP R + R LG+G N L Sbjct: 422 TPAGTFDIRAYRHAIDVLITAMEILVDNSGYPTENIARNSHDYRPLGLGYANLGALLMAL 481 Query: 528 GKRYSDGSANNLTHKTFEAIQYYLLKASNELAK---------------EQ--GACPWF-- 568 G Y + + + S+ +A+ E+ GACP F Sbjct: 482 GLPYDSDAGRDFAATLTAIMCGEAYLQSSRIAEKCPPLASATPLTASVERNGGACPGFYV 541 Query: 569 --------------NETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNS 614 K + +K W+ + +G RNS Sbjct: 542 NREPFLDVIRMHRAEVNKIGKSKTSSEPFKVPELDALITASKECWDQALAHGEKYGYRNS 601 Query: 615 TLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPD--------------- 658 ++ L P+ T + + T GIEP V K G + ++V + Sbjct: 602 QVTVLAPTGTIGFMMDCDTTGIEPDLALVKYKKLVGGGMIKIVNNTVPAALFKLGYKNED 661 Query: 659 ---------------------YEHLHDAYELLW------EMPGNDGYLQLVGIMQKFIDQ 691 EHL ++ + G+++++ Q F+ Sbjct: 662 VDAIVSYIDATGTIEGAPGIKPEHL-AVFDCSFKPAKGTRSIHYLGHIKMMAATQPFLSG 720 Query: 692 SISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSI 749 +IS N + + + L +++ G+K +Y ++ D + Sbjct: 721 AISKTVNMPH------DSNIDDIAEAYLESWRQGLKAVAIYRDGSKGAQPLNVSDGKGAK 774 Query: 750 Q 750 + Sbjct: 775 E 775 >UniRef50_Q01037 Ribonucleoside-diphosphate reductase large subunit n=6 Tax=root RepID=RIR1_SHV21 Length = 767 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 145/757 (19%), Positives = 264/757 (34%), Gaps = 95/757 (12%) Query: 59 HETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNH 118 ETII D++ + + + A ++ K + ++ + + Sbjct: 3 QETIISNLIDML-KVSAGWDREANEISGRLFHK-LMDMSSTETISQYMSLFGPLLEPHIL 60 Query: 119 LLEDYTEEEFKQMDTFIDHDRDM----TFSYAAVKQLEGKYLVQNRVTGE-IYESAQFLY 173 E+E ++ D K+ Y++ R YES + Sbjct: 61 EFIQNYEQEIDEVCLEYRASYDFMCLRNCGILPAKRFYDTYVLPPRTEMNGKYESIPHFF 120 Query: 174 ILVAACLFSN--------------------YPRETRLQYVKRFYDAVSTFKISLPTPIMS 213 +AA N +T +Q K FY +S+ + TP+M Sbjct: 121 ARIAAYCAWNCIMCEPLKDTLVYVQKRDWNVEIKTDMQIFKYFYKVISSQLVCCATPVMR 180 Query: 214 GVRTPTRQFSSCVLIECGDSLD--SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGG 271 SSC +I + +I++ + ++ R+G+G++ + G I Sbjct: 181 SAGVAGENLSSCFIIAPTLDTEKSTISSIFGELAPLLASRSGVGVDVTKFSFGGKNIHSC 240 Query: 272 EAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVR 331 K V+ + VR + + +WH ++ L K + R Sbjct: 241 ----------LKLINAQVEFFNDKSVRPVSVATYIEVWHCQIHEFLSAKLPENPD--RCN 288 Query: 332 HMDYGVQINKLMYTRLLKGED--ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIR 389 + GV + L + + LF P D P L + EFE Y + + Sbjct: 289 SIFQGVCVPSLFFKMYESDPNGLWYLFDPQDAPNLTRLY---GLEFEEEYLRLVS-EKKY 344 Query: 390 KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIAL-PTKP 448 KQ V L ++ TG Y+ + + N H ++ + SNLC EI P + Sbjct: 345 KQSVTLKSLMFSLINTIIKTGSPYVISKEAMNKHHWYETQGEAINCSNLCAEIVQQPKQF 404 Query: 449 LNDVNDENGEIALCTLSAFNL------GAINNLDELEELAILAVRALDALLDYQDYPIPA 502 + N N + C L++ N A + +LE AV ++A + P + Sbjct: 405 TSTCNLANVCLPKC-LNSSNFPYTCSNTAQFDFSKLEYAVQAAVFIINACI-LSPSPTSS 462 Query: 503 AKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE- 561 A G R++GIG A ++ G Y D + L FE + Y +K S+E+ Sbjct: 463 ATVG-QRERSMGIGCHGLADVFSEMGYGYLDLESECLDRDIFETMYYTAVKTSSEICSVG 521 Query: 562 QG-ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALM 620 +G F ++ A G+ T+ D + W L+++IK G+ NS ALM Sbjct: 522 KGQPFAGFRKSKLAHGVFHWATW----DAMPQRVPMKQWIHLQDNIKKFGVFNSQFIALM 577 Query: 621 PSETSSQISNATNGIEPPRGYVSIKASKD--------------------------GILRQ 654 P+ +SQ++ T+ P +S K S G + Sbjct: 578 PTAGTSQLTGYTDSFYPYFANMSSKVSNKEEIMKPNITFLKNVKPQDLCTVRFYGGDVSM 637 Query: 655 VVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQL 714 + D + + ++ + ++ I ++DQS S + L Sbjct: 638 MPEDVSTRYKHFLTAFDY-CPEAQMRRASIRAPYVDQSQSLTLFLTEENVQ----SAKYL 692 Query: 715 LKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQ 750 LL ++ G+KT +YY + + Q + + + Sbjct: 693 KDLLLLGFRLGLKTIMYYCRVKKTTKLLQLECLKLDE 729 >UniRef50_C9LXZ2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Veillonellaceae RepID=C9LXZ2_9FIRM Length = 749 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 115/636 (18%), Positives = 202/636 (31%), Gaps = 115/636 (18%) Query: 144 SYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTF 203 + L+ KY VA +FS R ++ + Sbjct: 7 TEIGRSILQAKYYHAGETE------PHEFIERVA-GIFSPEVR-------EKMRAYLEDG 52 Query: 204 KISLPTPIMSGVRTP---TRQFSSCVLIECG-DSLDSINATSSAIVKYVSQRAGIGINAG 259 +S + S+C ++ D ++SI + I K S GIG+N Sbjct: 53 ALSPAGRTLYAAGAKGKFKSSLSNCYIMPSPTDDIESIFTVNQQIAKIFSYGGGIGVNIS 112 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 +R S + TG + F K F T + SQ G R GA + H ++ L + Sbjct: 113 GLRPKDSRVNNVARSSTGAVSFLKIFNTTGEVISQNG-RRGAMLVALDSEHPDIYEFLHM 171 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 K ++ M+ + + ++ + L Sbjct: 172 KQENE----KLASMNLSILFSDAFMQAVIDDAEYELTF---------------------- 205 Query: 380 TKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPA-IAPVRQSNL 438 E ++ ++A E F Q + G D N ++ + +N Sbjct: 206 -DVEATGEKIRRTIRAAEFFDEYCQTQWDWGDPGALFKDRLNDYTLLSGYDEYKIEVTNP 264 Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN----------LDELEELAILAVRA 488 C E C L + NL + +E AVRA Sbjct: 265 CGEFGGNAYN------------SCNLMSLNLYSFIEDKFGDAPHIAEEEFRAAIQTAVRA 312 Query: 489 LDALLDYQD--YPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA 546 LD +LDY P+ ++ R++G+G+ A Y + + Sbjct: 313 LDEVLDYGFDTQPLEENRQCIRDWRSVGLGLFGVADAFVAMKLAYGSRESCDFIQGVLRT 372 Query: 547 IQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESI 606 + + S LAKE+GA ++ ++K + + L + + I Sbjct: 373 MFTEAARTSAALAKEKGAFGKYD-------------WEKTKKSPLIQRLAEEAPEVYAEI 419 Query: 607 KTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKAS-----KDGILRQVVPDYE 660 K +GLRN TL ++ P+ T S + + G EP + + G R Sbjct: 420 KEYGLRNGTLLSIAPTGTISLLMGVFSGGCEPLYQISYERTTHKMEEGSGSFRVYAHSVS 479 Query: 661 HLHDAYELLWEMPGND-----------------GYLQLVGIMQKFIDQSISANTNYDPSR 703 L D ++L ++ D ++L MQK++D SIS+ N + Sbjct: 480 DLLDYHKLPHDLTNEDIKKRFPWVIESHDVPYLHRVELQAAMQKYVDNSISSTVNLKHA- 538 Query: 704 FPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDG 737 + L A+K K T++ + G Sbjct: 539 -----ATPADIRNIYLAAWKSRCKGITVFRDGCKRG 569 >UniRef50_Q77MS1 Ribonucleoside-diphosphate reductase n=9 Tax=Herpesviridae RepID=Q77MS1_GAHVM Length = 822 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 149/791 (18%), Positives = 261/791 (32%), Gaps = 125/791 (15%) Query: 42 ELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQY----LAARLAIFHLRKKAYGQF 97 +S I D ++ + D Y + R+ + + + Sbjct: 77 VRKSPEMIPSTINMRDHITRLVNKMKPICRFDERLYSLCGELVHLRIELREVPLDTWLLS 136 Query: 98 EPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLV 157 + L VV + Y H+ E + + I +A+K +YLV Sbjct: 137 KKLNLKYEVVDNIRR--YRAHI-----EMDMLRFYGSIHPWLKRLGLQSALK--YEEYLV 187 Query: 158 QNRVTGEIYESAQFLYILVAACLFSNYPRETRL------------QYVKRFYDAVSTFKI 205 + + ES ++ +AA + + F+ A++ Sbjct: 188 ELEDGKK--ESLCQFFVRLAAAAATEASMKKPFMTTLTTGVANWRTTFTTFFLALANQLF 245 Query: 206 SLPTPIMSGVRTPTRQFSSCVLIEC-----GDSLDSINATSSAIVKYVSQRAGIGINAGR 260 TP M + +SC L++ D+L +I +V ++ R GIGI+ Sbjct: 246 VPSTPCMLFLGREGTSTASCYLMDPRTNNTQDTLKAITE---DVVPHLLARGGIGISLQH 302 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 + G + K + V + + R ++ WH ++ S L ++ Sbjct: 303 LNGK-----------FGLMHVMKVLDSLVMAANVNESRPTGICVYLEPWHADIMSALNMR 351 Query: 321 -NNRGVEGNRVRHMDYGVQINKLMYTRL------LKGEDITLFSPSDVPGLYDAFFADQE 373 E R ++ + L++ R K TLF E Sbjct: 352 GMVAAEESRRCDNVFLALWSCDLLFKRYLRHVNGEKNVIWTLFD----SRASILTKLHSE 407 Query: 374 EFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPV 433 EFE+ Y + E + + ++ +++ ASTG +I D CN H + + Sbjct: 408 EFEKEYERLESEGLGV-ASIPIRDMMFAIIKSAASTGSPFILFKDACNRHYITNTQGDAI 466 Query: 434 RQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------NNLDELEELAIL 484 SNLC EI T + +C+L++ NL + D L L Sbjct: 467 AGSNLCTEIIQKTDANTN--------GVCSLASINLARCVRNIDGNRQFDFDALRYAVRL 518 Query: 485 AVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTF 544 A ++A+++ D P + G R++GIGV F G D A +L F Sbjct: 519 ATVFVNAIMEGSDVPTEKSHSGRERNRSMGIGVQGFHTAFLSMGLDLCDERARSLNKLIF 578 Query: 545 EAIQYYLLKASNELAKEQG--ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEAL 602 E + + S E E+G F+ + YA+G L D + +W L Sbjct: 579 EFMLLEAMTVSCEFC-ERGLPPFADFSNSYYARGRLHFDGWANVE-----LAAVEEWNML 632 Query: 603 RESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHL 662 R+ I + GL N+ ALMP+ S+Q++ + G P + K + G L + Sbjct: 633 RDRIVSAGLYNAQFIALMPTAASAQVTEVSEGFSPLFSNMFSKVTSTGELLRPNIQLMEE 692 Query: 663 HDA--------------------------------------YELLWEMPGNDGYLQLVGI 684 Y+ ++ + L Sbjct: 693 LRTIYLDNENQRLATIAALESANWNIQTALGNKPECHSLLKYKTAFDYD-QALLIDLCSD 751 Query: 685 MQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQD 743 F+DQS S + G + +++ LL AYK G+KT +YY R Sbjct: 752 RAPFVDQSQSMTLFI--TETADGTLLASRVMNLLLHAYKAGLKTGMYYCKIRKATNAGVF 809 Query: 744 DLVPSIQDDGC 754 + C Sbjct: 810 CGDGELTCSSC 820 >UniRef50_Q2S5T5 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5T5_SALRD Length = 894 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 105/573 (18%), Positives = 189/573 (32%), Gaps = 80/573 (13%) Query: 140 DMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDA 199 D+ + + + Y + A + + + +RFY Sbjct: 46 DIFETEISEEVYGQNYQYGTDD------RVPDTWYRNARAMAQVE--DDTDMWTQRFYQL 97 Query: 200 VST-------FKISLPTPIMSGVRTPTR--QFSSCVLI----ECGDSLDSINATSSAIVK 246 +S F + I + T +C + DS+D I A + K Sbjct: 98 LSGKGLGTGPFPFTPGGRIFANAGTGLGKATLINCFVSGFQGHDQDSMDEIQAELTRQAK 157 Query: 247 YVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV--------- 297 ++ G G A +R G+ I G + G + + + G Sbjct: 158 ILASEGGYGFCAHIMRPRGARIGGVGSMTPGAVQMLDVWNKQAATIVAGSGMKSDRDDVK 217 Query: 298 ---RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDIT 354 R GA + +WH ++ + K G R+ + V I + + Sbjct: 218 DKIRKGAQMVTMGIWHPDIIEFIEAKQEPG----RLHKFNMSVLITDEFMEAVKNDDTWA 273 Query: 355 LFSPSDVPGLY------DAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERAS 408 L P D +E + + +A E+++ +M + Sbjct: 274 LRFPDYENEKEFYKQHWDGNLKAYQEKGGTVKTWTDPATGEPAVYEAREIWNRIMDSTYN 333 Query: 409 TGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFN 468 + VD N + + + +N C E LP +C L N Sbjct: 334 RNEPGVIFVDTINKENNL-GYVEHINATNPCGEQVLPVG------------GVCLLGNLN 380 Query: 469 LGAINN-------LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFA 521 + + + D +++L LAVR LD + D P+ +R +R +G+G Sbjct: 381 VTQLVDREAGTIDYDLVDDLVPLAVRFLDNVNDLSYVPLEEQQRNLQEKRRIGLGHYGDG 440 Query: 522 YYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPID 581 L RY + + E + +AS LA+E+GA P F++ Y Sbjct: 441 SALMMMKTRYGSEEGARVMREFQEHLANQAYQASARLAEEKGAFPLFDKDEYLSSPFVQR 500 Query: 582 TYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRG 640 K +E I GLRNS L ++ P+ +S + NA ++GIEP Sbjct: 501 LSDKT----------------KEMIGDLGLRNSHLLSIQPTGNTSTLGNAPSSGIEPVFM 544 Query: 641 YVSIKASKDGILRQVVPDYEHLHDAYELLWEMP 673 + I+ S+ L + +AYE+ ++ Sbjct: 545 HSYIRTSEQPALPDGINRPPMSPNAYEVGQDID 577 >UniRef50_D2RTR9 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Halobacteriaceae RepID=D2RTR9_9EURY Length = 1042 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 108/693 (15%), Positives = 210/693 (30%), Gaps = 160/693 (23%) Query: 183 NYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSS 242 + R + F + +P + +Q S+C + D +D I+ T+ Sbjct: 135 DEIRAHVEDVAEEFQGMMENLDFMPNSPTLMNAGDELQQLSACFVDSPDDDIDDIHQTAK 194 Query: 243 AIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAA 302 + G+G ++R G + +G I F + + ++ +QGG R GA Sbjct: 195 EAAQVFQSGGGMGYAFWQLRPYGDAVGSTGGIASGPITFMRTYDQMCETIAQGGARRGAQ 254 Query: 303 TLFYPMWHLEVESLLVLKN----------------------NRGVEGNR----------- 329 + H +V + KN ++ R Sbjct: 255 MGVMRVSHPDVIQFIHAKNKDVSLAETLRLNDPDDFTHNSFQEALDEARELIDDEGKVPK 314 Query: 330 ---------VRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 + + + V I L GE+ T +P E + LY Sbjct: 315 HLRNAVEGHLSNFNISVGITDDFMEALQNGEEFTFTNPRT-----GEPHIATAETKELYD 369 Query: 381 KYEKDDSIRKQR---VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP---VR 434 + D + + A EL+ +++ G + ++ N FD P + Sbjct: 370 MFGLGDYVEVGEELSIPAEELWDDIVEGAHENGEPGVIYLERVNKQHSFDVEKHPDHRIL 429 Query: 435 QSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG------------------------ 470 +N C E L E C L NL Sbjct: 430 ATNPCGEQPL------------EEYEACNLGHINLSTLADLEAPDWRVWYDEHGEEYDSL 477 Query: 471 -----AI----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFA 521 A + +E + + R L+ ++ D+P+ ++ R +G+G++ A Sbjct: 478 EDAVDAFLEEAIDFEEFDRRIEMGTRFLENVVTMSDFPVEKIEQKVREMRKIGLGIMGLA 537 Query: 522 YYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPID 581 + G Y ++N + + I + AS+ELA+E+G+ ++ + YA + Sbjct: 538 QLYIQLGMEYGSETSNEVARQLMRHINHGSKWASHELAEERGSFDEWDNSKYANPTEYRE 597 Query: 582 TYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGY 641 ++K A+E WE +RN + + P+ T+S + N T G EP Sbjct: 598 WFEKQTGLDADE-----WED------GFSIRNHNTTTIAPTGTTSMVGNTTGGCEPIYNV 646 Query: 642 VSIKASK------------------------------------------DGILRQVVPDY 659 K + + Sbjct: 647 AYYKNVSDDVQGDEMLVEFDDYFLRVLEDNDIDVDAVKEEAQEQMATNQFNGVEGLSTVP 706 Query: 660 EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLL 719 + + + + ++ + + + Q+ +D +IS N ++ Sbjct: 707 DAIGELFVTTGDLSAKE-HAGVQVACQQGVDSAISKTVNAP------NDSTLEDAKDVFE 759 Query: 720 TAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDD 752 Y+ G K + Y DG Q + D Sbjct: 760 YIYEHGGKGVTYYR--DGTRSKQVLTTRAKNAD 790 >UniRef50_Q76Z42 NrdA-A aerobic NDP reductase large subunit n=1 Tax=Aeromonas phage Aeh1 RepID=Q76Z42_9CAUD Length = 473 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 236/446 (52%), Positives = 305/446 (68%), Gaps = 6/446 (1%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 +LV K G TE K+ ++L +A G + +++ DG+ T +I + IK Sbjct: 1 MLVRKSSGITENFEPKKLLKILGFATAG-TRIDPNEILNGIMPSITDGMSTKNIQKLAIK 59 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYT 124 AAD IS + DYQY+AARL ++ +RK Y QF+P L H + +V+ G YD L +T Sbjct: 60 FAADRISIEQSDYQYVAARLQMYAIRKDVYNQFDPIHLKRHTLDLVQDGIYDKDLAIKWT 119 Query: 125 EEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY 184 ++EF +++ +I HDRD +YA V Q + KYL ++R T +IYE+ Q LY+LVA CL + Sbjct: 120 DDEFNELNAYIKHDRDFDLAYAGVMQFKEKYLAKDRSTDQIYETPQILYMLVAMCLHQDE 179 Query: 185 PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAI 244 + R+ VK FYD S K+SLPTPI++GVRTPTRQFSSCV IE GD LDSINAT+S+I Sbjct: 180 -KTDRIAKVKNFYDVTSLGKLSLPTPILAGVRTPTRQFSSCVKIESGDELDSINATASSI 238 Query: 245 VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL 304 V Y+S+RAGIGIN G IRA GS IR GE HTG IPF+K+FQTAVKSCSQGGVRGGAATL Sbjct: 239 VDYISKRAGIGINGGAIRAEGSRIRSGEVRHTGIIPFWKYFQTAVKSCSQGGVRGGAATL 298 Query: 305 FYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPS-DVPG 363 +YPMWHLEVE +LVLKNN+GVE NR+R +DYG+QINKL + RL + ITLFSP Sbjct: 299 YYPMWHLEVEKILVLKNNKGVEENRIRQLDYGIQINKLFFERLKNDDYITLFSPDVQNGE 358 Query: 364 LYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTH 423 LYD F+ D +F+ LY E + RK+R+KA ELF+L QER TGRIY VD+ N+ Sbjct: 359 LYDLFYKDPVKFKELYEMLENEPWCRKKRIKASELFNLFAQERTGTGRIYPMFVDNVNSA 418 Query: 424 SPFDPAIAPVRQSNLCLEIALPTKPL 449 +P+ P+R NLC+EIALPT P+ Sbjct: 419 TPYKE---PIRMGNLCIEIALPTVPM 441 >UniRef50_O41962 Ribonucleoside-diphosphate reductase n=3 Tax=Murid herpesvirus 4 RepID=O41962_MHV68 Length = 783 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 133/786 (16%), Positives = 258/786 (32%), Gaps = 127/786 (16%) Query: 53 IKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRK-------KAYGQFEPPALYDH 105 ++T + + I A L++ + + LA RL F +R+ + F Sbjct: 11 VQTVNAIDAAI-AELKLMAGHSHEANVLAGRLLHFKMREVCTQTVAQFLDAFSSVLDEGL 69 Query: 106 VVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEI 165 + + + +++ Y F + Y A + Y+++N V Sbjct: 70 CAFIGNYSQSLDEMVQRYVSGGFAAVKEN---------GYLAAARFYDTYVLRNDVK--- 117 Query: 166 YESAQFLYILVAACLF-------------------SNYPRETRLQYVKRFYDAVSTFKIS 206 YES +++ ++A E + + F++ +++ ++ Sbjct: 118 YESVPHMFMRISAFCAYHCIQNECLFKTLKHMELDRGNVVENAMDLITYFFEMIASQQVC 177 Query: 207 LPTPIMSGVRTPTRQFSSCVLIECG-DSLDSINATS-SAIVKYVSQRAGIGINAGRIRAL 264 TP+M SSC + DS + S + K ++ ++G+G++ + Sbjct: 178 CATPVMRSAGLRDANLSSCFIFAPALDSEEKTVDAVFSELTKLLACKSGVGMDLSTY-SH 236 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 G + K + + +R + + +WH + L K Sbjct: 237 GKNLH----------AVLKALDGQITYFNDHNIRPVSVAAYMEIWHTNIMDFLTAKLPEN 286 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKG--EDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 E R ++ GV I ++ + + LF P L + + F Y Sbjct: 287 PE--RCGNLFQGVCIPEIFFRTYKNDPESNWYLFDPKKAEVLTNTY---GYMFSIAYAGL 341 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP---AIAPVRQSNLC 439 + + + V + ++ TG YI N N H + + +NLC Sbjct: 342 VEQGA-YEAVVPIKSVMFALVSCIIKTGGPYILNKKAINRHDWHEWSTHQYRAINCANLC 400 Query: 440 LEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-------------------NNLDELEE 480 E+ ++ C L+ L +++ LE Sbjct: 401 AEVIQYPGE---------NVSTCNLANICLPKCLEDDKFVSGKSCLLTYEREFSIERLER 451 Query: 481 LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT 540 AV ++A + P A+RG R++GIGV A A G Y D + L Sbjct: 452 ATEAAVFIINACIHGGTLPTQRARRG-QSDRSMGIGVQGLADTFAMMGLGYFDAGSEILD 510 Query: 541 HKTFEAIQYYLLKASNELAKE-QG-ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYD 598 K E + + L S K +G + ++ ++ G+L + + + Sbjct: 511 QKIAETLYFNALNTSINFVKIGKGEPYANYEQSKHSIGVLHWHDWDMCSPMVY---TRDE 567 Query: 599 WEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPD 658 WE L S + HG+ NS A MP+ + QI+ ++ P +S K S + + Sbjct: 568 WEDLARSCEVHGVYNSQFVAYMPTAGTGQITGYSDSFYPFYSSMSSKVSNKEEILRPNMT 627 Query: 659 YE------HLHDAYELLWEMPG-------------------NDGYLQLVGIMQKFIDQSI 693 + E W++ Y++ + FIDQS Sbjct: 628 LMSRMSDSEVQTLRECNWDIAKLPEPLLQKYRIFLSAFDYEPSLYVRRAMLRAPFIDQSQ 687 Query: 694 SANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDD 752 S + + L+ ++ G+KT +YY R A + + V Sbjct: 688 SMTLFLNEDYAS----SASNIKNLLMYGWECGLKTLMYYCRIRKTATSNEFECVRRNSQQ 743 Query: 753 GCESGA 758 + A Sbjct: 744 KYVNCA 749 >UniRef50_P50643 Ribonucleoside-diphosphate reductase large subunit n=21 Tax=Herpesviridae RepID=RIR1_SUHVK Length = 835 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 137/676 (20%), Positives = 249/676 (36%), Gaps = 100/676 (14%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPR---------ETRLQYVKRFY 197 + + E YL + E+ ++ +AA + R + + ++ Sbjct: 193 SALKYEEMYLARLEHG--RCEAMDQFFVRLAAAAATATRRPMALVLCGSDAWPEVFDAYF 250 Query: 198 DAVSTFKISLPTPIMSGVRTPTRQFSSCVLIEC--GDSLDSINATSSAIVKYVSQRAGIG 255 A++T I TP+M +SC L+ + +++ A + + + +R G+G Sbjct: 251 RALATQAIVPATPLMLFAGRARGSLASCYLLNPLPRTTEEAVRAITDEVAPILLRRGGVG 310 Query: 256 INAGRIR--ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 ++ G R G + K + + + R ++ WH +V Sbjct: 311 LSLQSFNRTPSGDCTR-------GIMAVLKALDSMTAAINSDSERPTGVCVYVEPWHADV 363 Query: 314 ESLLVLKNN-RGVEGNRVRHMDYGVQINKLMYTRLLKGED------ITLFSPSDVPGLYD 366 ++L ++ E R ++ + L + R + D TLF Sbjct: 364 RAVLNMRGMLAADESLRCDNIFSCLWTPDLFFQRYQRHLDGERAVKWTLFDDRASH---- 419 Query: 367 AFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPF 426 +F R Y + E+ + + ++ L+++ TG ++ D CN H Sbjct: 420 LASLHGPDFAREYERLERLGLGV-ESLPIQDMAFLIVRSAVMTGSPFLMMKDACNRHFHT 478 Query: 427 DPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEEL 481 D A + SNLC EI P GE +C L++ NL A + L Sbjct: 479 DTRGAALATSNLCTEIVQRATP--------GENGVCNLASVNLPACLAGGAFDFAALRRA 530 Query: 482 AILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTH 541 A +A ++A++ +YP A+ G R+LGIG+ + +D +A L Sbjct: 531 ARVAAVFVNAMMRIGNYPTGASVEGVRRSRSLGIGLQGLHTTVLALDMDMADPAARRLNA 590 Query: 542 KTFEAIQYYLLKASNELAKEQG--ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDW 599 E + Y ++ AS EL E+G F + YA+G++P D Y++ + W Sbjct: 591 AIAEELLYGVMDASVELC-ERGLRPFDGFEHSRYARGVMPFDAYER-----VSLREPMRW 644 Query: 600 EALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV-PD 658 +ALR I HG+ N+ ALMP+ +SSQ++ ++ G P + K + G L + P Sbjct: 645 DALRVRIAEHGVYNAQFVALMPTVSSSQVTESSEGFSPTFTNMFSKVTISGELLRPNLPL 704 Query: 659 YEHLHDA------------------------------------YELLWEMPGNDGYLQLV 682 E L ++ +E + + + Sbjct: 705 METLRRLFPRECARRDAVARLERAQWSVAAAFGELPAGHPLAKFKTAFEYD-QELLIDMC 763 Query: 683 GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDA 741 F+D S S + GK+ +++ L+ AY G+KT +YY R + Sbjct: 764 ADRAPFVDHSQSMSLFLTEP--ADGKLHASRVMGLLMRAYNLGLKTGMYYCKIRKATNNG 821 Query: 742 QDDLVPSIQDDGCESG 757 D C S Sbjct: 822 VFT----GGDLVCTSC 833 >UniRef50_B4RFH2 Ribonucleoside-diphosphate reductase alpha chain n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RFH2_PHEZH Length = 570 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 108/567 (19%), Positives = 187/567 (32%), Gaps = 97/567 (17%) Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIE-----CGDSLDSINATSSAIVK 246 + RF + F+ I +G P +C ++ G D V Sbjct: 48 WRGRFRALLEDFRFLPGGRIQAGAGDPAAVLFNCFVLPAFGPGPGAEADRALDALREAVA 107 Query: 247 YVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFY 306 + G+G + G+ G + + + A + G R GA Sbjct: 108 TLRAGGGVGCDVSGAPPAGAAAER-GPPAPGPVGYLHLWDAACRVFLAGATRQGALMGAL 166 Query: 307 PMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYD 366 H +VE+ K G + + V + + + D L P + Sbjct: 167 RCDHPDVEAFAAAKTAPG----ALSRFNLSVAVTEAFMAAVAADADWPLRFPVE------ 216 Query: 367 AFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPF 426 + V+A L++ +++ TG + +D N +P Sbjct: 217 -------------------TGPVVRTVRARGLWTRILRCAYETGDPGVLFIDRINAENPL 257 Query: 427 DPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEEL----- 481 + +N C E+ LP + C L + NL E Sbjct: 258 AWR-ERLAATNPCGEVPLP------------DYGACDLGSLNLTRFVAAPFTPEARLDLA 304 Query: 482 -----AILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSA 536 A AVR LD ++D +P+ A A R +G+G+ A L G RY + ++ Sbjct: 305 GLAEAAAAAVRLLDDVIDISAFPLAAQADEARATRRIGLGITGLADALVMLGLRYGEAAS 364 Query: 537 NNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLH 596 + I+ AS LA+E+GA P G Sbjct: 365 LRAAGEAMRTIRDAAYGASAGLAREKGAFPACEAERLLAGPF----------------AR 408 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKASKDG----- 650 E LR +I HGLRNS L A+ P+ + S ++ + G+EP V + + Sbjct: 409 RLPEPLRAAIARHGLRNSHLLAVAPAGSISLLAGGISPGLEPIFAAVQERTLRTSPGETR 468 Query: 651 ----------ILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYD 700 + R+ + L A+ ++P D +L + +Q ++DQ+IS N Sbjct: 469 AVRWTAASVALWRRATGEAAGLPPAFAAAHDIPA-DAHLDMQAALQPYVDQAISKTVNVP 527 Query: 701 PSRFPSGKVPMQQLLKDLLTAYKFGVK 727 + P + + A+ G+K Sbjct: 528 ------VETPFEDFARIYAGAHARGLK 548 >UniRef50_B0C346 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C346_ACAM1 Length = 649 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 121/685 (17%), Positives = 230/685 (33%), Gaps = 127/685 (18%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNY-PRETRLQYVKRFYDAVSTFKI 205 + K + KYL+++ V S + + VA + S E + + ++F + K Sbjct: 14 SQKAVLQKYLIEDEV------SWEDVVHRVATYVASAESTPEQQSYWQEKFLSILQPMKF 67 Query: 206 SLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAG------ 259 I++ TR +C ++ D + I S V R G+GIN G Sbjct: 68 VPGGSILANCDHGTRGLLNCFVLSAEDHIHDITKLVSDSVLTTKFRGGVGINIGAEGSKG 127 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLV 318 IR G+P + + G K + G R GA H ++ + Sbjct: 128 YIRQKGAPFQ--DGKALGPCAVLDMVSENSKKITTGNKARRGAFLFSMNWKHPDIWEFIQ 185 Query: 319 LKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERL 378 K ++ ++ + + + + E E Sbjct: 186 AKTQSTIDA------NFAKSVMEELAQLAQQDEP-------SQGKQEKLKALHTEVGTAW 232 Query: 379 YTKYEKDDSIRKQRV----------------------KAVELFSLMMQERASTGRIYIQN 416 + + R +R +A +L+ M + +T + Sbjct: 233 VETHLNPEGKRDRRWHNANISVQLDDEFFAKLDQGDEEANKLWQAMAENAHATADPGLLL 292 Query: 417 VDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN--- 473 +D+ SP V +N C EI LP + C L + L Sbjct: 293 IDNAKRRSPIRDF---VTCTNPCGEIFLPPN------------SACNLGSLVLTKFVRRT 337 Query: 474 -------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMG-RRTLGIGVINFAYYLA 525 + D+L E +A+R LD +LD ++ P K R LG+G++ +A YL Sbjct: 338 AEGNIEIDWDDLAETVRIAIRFLDNVLDVSEFATPDQKHNVRDVFRQLGLGIMGWADYLK 397 Query: 526 KHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKK 585 Y + I + + S +A E+GAC +++ + P + + Sbjct: 398 LARIPYDSARHLEEIDRWGSWIAAHAYRTSEAIAAEKGACGVWDQIKDIQTGNPFERWMD 457 Query: 586 DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIK 645 N + + R+ + RNST+ ++ P+ + +Q++ + EP G K Sbjct: 458 SEGNYYNGTEAHHND--RQDLTQVPRRNSTVLSIAPTGSIAQLAACSWAFEPDFGLTLWK 515 Query: 646 -------ASKDGILRQVVPDYEHLH----------------------------DAYELLW 670 S+ ++ + P + L+ ++++ Sbjct: 516 QVFVDASRSQQNWVQILNPYLDELNLPEADAEIVKQTGSLADTNYGKQHPEIARSFKIAR 575 Query: 671 EMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--T 728 E+P ++ + Q +ID SIS N + ++ + A K G+K T Sbjct: 576 EIP-PGWHILVQSKWQSWIDSSISKTINLP------AHATVDEIKQIYRLAEKAGLKGVT 628 Query: 729 LYYQNTRDGAEDAQDDLVPSIQDDG 753 +Y R G D++ V + + D Sbjct: 629 IY----RSGTLDSEPIKVGNSEKDS 649 >UniRef50_D1C7D7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7D7_SPHTD Length = 1139 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 98/634 (15%), Positives = 177/634 (27%), Gaps = 109/634 (17%) Query: 112 MGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQ------NRVTGEI 165 T + + D + +S A + KY + + + Sbjct: 37 DTIAWARRTSRITNPDGSVVFEMQDAEIPAPWSQVATDIMVSKYFRKAGVPQVDENGNPL 96 Query: 166 YE-----------SAQFLYILVAACLFSNYPR-------ETRLQYVKRFYDAVSTFKISL 207 + SA+ + + C R E + + + Sbjct: 97 LDAEGNPVLGPERSARQVISRLTGCWRDWGERYGYFASEEDAQAFEDELKYMLVHQMAAP 156 Query: 208 PTPIMSGVRT------------------------------PTRQFSSCVLIECGDSL--- 234 +P +C + D L Sbjct: 157 NSPQWFNTGLYYAYGITGPAQGHSYIDPDTGELKYSQDAYSRPTPHACFIQSVEDDLVNP 216 Query: 235 DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQ 294 I + + +G G N +IRA G P+ G +G + F K F A + Sbjct: 217 GGIFDLVTREARVFKYGSGSGTNFSKIRAEGEPLSG-GGTSSGLMSFLKIFDRAAGAIKS 275 Query: 295 GGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDI 353 GG R A + + H ++E+ + K + + Y N Y + Sbjct: 276 GGTTRRAAKMVVVDVDHPDIEAFINWKAEEEKKVAALIAAGYSADFNGEAYATV------ 329 Query: 354 TLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIY 413 + + ++ + D F + ++ D I + V+A +L+ + Q Sbjct: 330 SGQNSNNSVRVTDEFIRAVLTDGEWHLRWRTDGRIA-KTVRARDLWHQIAQAAWQCADPG 388 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI- 472 +Q N PA + SN C E + C L++ NL Sbjct: 389 VQFDTTINAWHTC-PASGRINASNPCSEYMF------------LDDTACNLASLNLMKFY 435 Query: 473 ------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAK 526 +++ L L+ + +P A R + RTLG+G N L Sbjct: 436 DAERRTFDIERFRHAVRLWTIVLEISVLMAQFPSEAIARKSYEFRTLGLGYANLGSMLMT 495 Query: 527 HGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKD 586 G Y A + + AS E+A G P F E + + + Sbjct: 496 MGLPYDSDRARGIAAAVTAIMTGEAYAASAEMASVLGPFPAFAENREHMLRVIRNHRRAA 555 Query: 587 LDTIANE----------------------PLHYDWEALRESIKTHGLRNSTLSALMPSET 624 + E W+ + +G RN+ + L P+ T Sbjct: 556 YNAHPGEYEGLSVAPVGLDPATCPEDLVQAAREAWDRALAMGEQYGYRNAQTTLLAPTGT 615 Query: 625 SSQISNA-TNGIEPPRGYVSIKASKDGILRQVVP 657 + + T G+EP V K G ++ Sbjct: 616 IGLLMDCDTTGVEPDFALVKFKKLAGGGYFKIAN 649 Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 38/80 (47%), Gaps = 8/80 (10%) Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQ 732 + G+++++ +Q F+ +IS N +V ++ + + + +++ G+K + Sbjct: 796 IHHMGHIRMMAAVQPFLSGAISKTINMP------NEVTVEDIEEAYMASWRLGLKAMALY 849 Query: 733 NTRDGAEDAQDDLVPSIQDD 752 DG++ +Q S QD Sbjct: 850 R--DGSKLSQPLSSASKQDQ 867 >UniRef50_Q196Z5 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR1_IIV3 Length = 630 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 138/698 (19%), Positives = 237/698 (33%), Gaps = 148/698 (21%) Query: 135 IDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVK 194 ID R+ F +++L+ Y+ ++ S Q + +A ++ + Sbjct: 4 IDESRNNLFDALGLQRLKDSYMKEDES------SPQERFAFIARQFCADDEP-----LAQ 52 Query: 195 RFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGI 254 R YD +S +S +P +S RT +C L D+ + T + + + GI Sbjct: 53 RLYDYMSQHWLSPSSPQLSFGRTKQGLPIACFLPYLHDTARGLIDTWAEVSELSMIGGGI 112 Query: 255 GINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVE 314 LG IR + G IP + + + + QG R G+ + + H E+ Sbjct: 113 --------GLGVGIRQPDEKSVGIIPHLRTYDASCTAYKQGQTRRGSYAAYLDISHPEIL 164 Query: 315 SLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRL--------------------------- 347 S L + G ++ ++ GV + ++ Sbjct: 165 SFLNTRRVGGDHNYKLLNLHNGVNVPDSFMKKIWILSTLAPFVKMDPCPTTETLFKKAVT 224 Query: 348 -LKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQER 406 LK + + A A+Q + + + K+ +KA EL+ ++ R Sbjct: 225 TLKDSRYFGADDRWLGEVSFAALAEQLDVVNRWDLIDPHTGKVKETIKATELWERIILTR 284 Query: 407 ASTGRIYIQNVDHCNTHSP-FDPAIA-PVRQSNLCLEIALPTKPLNDVNDENGEIALCTL 464 A TG YI +D N P F + +RQSNLC E+ LPT + A+C L Sbjct: 285 AETGEPYIHWIDTSNRALPQFQKNLGLSIRQSNLCSEVVLPT--------DETRTAVCCL 336 Query: 465 SAFNLGAINNLDELEELAILAVRALDAL----LDYQDYPIPAAKRGAMGRRTLGIGVINF 520 ++ NL + E+ + LD + +D+ + A A R +GIG + F Sbjct: 337 ASLNLDYFDKWCNNEQFYLDVATYLDNVLQYFIDHAPPTLKRAVHSARSERAIGIGALGF 396 Query: 521 AYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPI 580 YL A + K F+ I +L + + EL + +G P T Sbjct: 397 HSYLQSKMVDIESLPAYLINKKIFKTISSHLERVNLELGELRGEAPDCVGT--------- 447 Query: 581 DTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISN-ATNGIEPPR 639 G R S ++A+ P+ TSS I + EP R Sbjct: 448 -----------------------------GRRFSHMTAIAPNATSSIIMGNTSPSCEPFR 478 Query: 640 GYVSIKASKDGILRQVVPDYEHL-----------------------------------HD 664 + + + G + L Sbjct: 479 ANIYKQDTISGSFVTYNKHLKRLLEERIPDNQARERVWSSIKMHDGSVQHLNQLTVQEKK 538 Query: 665 AYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKF 724 ++ E+ + L QK+IDQS S + ++P + + K L A+ Sbjct: 539 VFKTWPEI-NQLSLVMLAADRQKWIDQSQSTSLFFNP------DERISYVHKIHLKAWLH 591 Query: 725 GVKTLYYQNTR-----DGAEDAQDDLVPSIQDDGCESG 757 G+KTLYY +R D P ++D C Sbjct: 592 GLKTLYYFRSRKILTVDKVHHTTTTADPKTEND-CTFC 628 >UniRef50_B9L1R5 B12-dependent ribonucleoside diphosphate reductase n=2 Tax=Bacteria RepID=B9L1R5_THERP Length = 1122 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 111/682 (16%), Positives = 185/682 (27%), Gaps = 118/682 (17%) Query: 91 KKAYGQFEPPALYDHVVKMVEMGKYDN----HLLEDYTEEEFKQMDTFIDHDRDMTFSYA 146 + GQ + Y+ T + + D + +S Sbjct: 4 EHTNGQEQRGLKIRRFYTKAGQDPYETVKWTRRTSRITNPDGTVIFEMTDAEVPEHWSQV 63 Query: 147 AVKQLEGKYLVQ------NRVTGEIYE-----------SAQFLYILVAACLFSNYPR--- 186 A + KY + + I + S + + + C R Sbjct: 64 ATDIVVSKYFRKAGVPQLDEQGRPILDDQGNPVLGPERSVRQVVRRLVGCWRDWGERYGY 123 Query: 187 ----ETRLQYVKRFYDAVSTFKISLPTPIMSGVRT------------------------- 217 E + + + +P Sbjct: 124 FATAEDAQAFEDELAYMLLHQIGAPNSPQWFNTGLYWAYRIAGPPQGHWYVDPETGELRQ 183 Query: 218 -----PTRQFSSCVLIECGDSL---DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIR 269 +C + D L I + AG G N +IRA G P+ Sbjct: 184 SPDAYSHPSAHACFIQSVEDDLVNPGGIFDLVLREARVFKYGAGSGTNFSKIRAEGEPLS 243 Query: 270 GGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGN 328 G +G + F K F A + GG R A + + H ++E + K + Sbjct: 244 G-GGTSSGLMSFLKVFDRAAGAIKSGGTTRRAAKMVVVDIDHPDIEKFIRWKAEEEKKVA 302 Query: 329 RVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSI 388 + Y N Y + + + ++ + D F E + ++ D I Sbjct: 303 ALVAAGYSADFNGEAYATV------SGQNSNNSVRVPDEFIRAVLEDRDWHLRWRTDGRI 356 Query: 389 RKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKP 448 + V+A EL+ ++ + IQ N PA + SN C E Sbjct: 357 A-KTVRARELWQMIAEAAWQCADPGIQYDTTINDWHTC-PASGRINASNPCSEYMF---- 410 Query: 449 LNDVNDENGEIALCTLSAFNLGAI-------NNLDELEELAILAVRALDALLDYQDYPIP 501 + C L++ NL ++ L L+ + YP Sbjct: 411 --------LDDTACNLASLNLLKFYDAKSGRFDIAAFRHAVRLWTIVLEITVLMAQYPSR 462 Query: 502 AAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKE 561 + RTLG+G N L G Y A + + S E+A Sbjct: 463 EIAWNSYRFRTLGLGYANLGSLLMTMGLPYDSDRARAVAAAITAIMTGEAYATSAEMAAI 522 Query: 562 QGACPWFNETTYAKGILPIDTYKKDLDTIANE----------------------PLHYDW 599 G P F E + + + D E W Sbjct: 523 LGPFPAFPENREHMLRVIRNHRRAAYDAHPEEYEGLHIAPQGLDATHCPPELVAAAREAW 582 Query: 600 EALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGIL-----R 653 + E + G RN+ + L P+ T + + T GIEP V K G R Sbjct: 583 DRALELGERFGYRNAQATLLAPTGTIGLLMDCDTTGIEPDFALVKFKKLAGGGYFKIVNR 642 Query: 654 QVVPDYEHLHDAYELLWEMPGN 675 V P E L E + ++ Sbjct: 643 SVAPALERLGYTPEQIQDILTY 664 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 8/86 (9%) Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQ 732 G+++++ +Q F+ +IS N +V ++ + ++ G+K L Sbjct: 788 IHYMGHIRMMAAVQPFLSGAISKTINMPH------EVTVEDVANAYFEGWRLGLKALAIY 841 Query: 733 NTRDGAEDAQDDLVPSIQDDGCESGA 758 DG++ +Q S + + E + Sbjct: 842 R--DGSKLSQPLSTRSSEKEKSERAS 865 >UniRef50_Q97K72 Ribonucleotide reductase, vitamin B12-dependent n=2 Tax=Clostridiales RepID=Q97K72_CLOAB Length = 987 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 125/830 (15%), Positives = 239/830 (28%), Gaps = 205/830 (24%) Query: 86 IFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSY 145 + L K+ Y + + V + + K D +++ T + M D + +S Sbjct: 4 LKILFKRFYTKELESSKTKTVYDLFKWKKVDVKIIDHKTGKVLTDMK---DLEFPYDYSQ 60 Query: 146 AAVKQLEGKYLVQNRVTGEI-YESAQFLY-ILVAACLFSNYPRETRLQYVKR---FYD-- 198 A + KY ++ + E YE++ + + + E ++ FYD Sbjct: 61 NACDIIASKYFKKSGIPNECGYENSMKMVAHRLVSFWCEALKDEGIIKTENEASIFYDEL 120 Query: 199 --AVSTFKISLPTPIMSGVRTP------------------------------TRQFSSCV 226 A+ + +P Q S+C Sbjct: 121 VYALLNQMYAPNSPQWFNTGLSLIYGINGEAQGHFYYDSKEKKVLQSKDSYTRTQASACF 180 Query: 227 LIECGDSL---DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYK 283 +I D L SI+ K +G G N IRA G + G +G + F K Sbjct: 181 IISIEDKLLGSHSISEQYVTETKLFKGGSGTGTNFSTIRAKGEKLSG-GGISSGLMSFLK 239 Query: 284 HFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRV------------ 330 + GG R A L + H E+ + K + + Sbjct: 240 GLDRNAGAIKSGGTTRRAAKMLCLNVDHPEIMDYITWKAKEEDKVKALGKMGYDASFEGE 299 Query: 331 -------RHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE 383 ++ + V ++ ++ ++ +P + L + + E++ Sbjct: 300 AYETVSGQNANNSVMLSDEFMKKVCNLKN----NPDETIELKGRVDSSVNKVEKI----- 350 Query: 384 KDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS--------PFDPAIAPVRQ 435 L+ + D N F+ + Sbjct: 351 ------------SNLWEAFNKSSWRCADPSPLFSDTLNAWHTCPGGEDGNFNADYNKINS 398 Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-------NNLDELEELAILAVRA 488 +N C E A + C L++ NL +L+ + + L Sbjct: 399 TNPCGEYAF------------LDDTSCNLASINLYKFYDTENKTFDLEGYKHVIGLVQLL 446 Query: 489 LDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQ 548 L+A + + +P R RT G+G+ N A L G Y ++ + Sbjct: 447 LEASIHWGQFPTEDVARKTHMFRTTGLGISNLAALLMVMGYPYDSEEGRAISSSLIGVLT 506 Query: 549 YYLLKASNELAKEQGACPW-------------------------FNETTYAKGILPIDTY 583 Y S+ +AKE GA F + Y ++ Sbjct: 507 GYSYYISSLMAKEVGAFEKYNINKEHMLKVLRNSARAAGSIDTPFEKIGYKPLVVNHSIL 566 Query: 584 KKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYV 642 +K+ + L W + ES + +G RN+ +S + P+ T S + + +EP +V Sbjct: 567 EKEDLRYISSELKNSWNSALESGEKYGFRNAQVSVMAPTGTISFAMDCASTSVEPFFSHV 626 Query: 643 SIKASKDGI------------LRQVVPDYEHLHDA-----------------YELLWE-- 671 K G L+ + + D YE + + Sbjct: 627 IYKKLSGGGYMTLTNPLIQESLKHLGYSENEIEDITNYILRKKKVKTDDGTEYETILDGK 686 Query: 672 --------------------------MPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 G++ +V + I S+S N Sbjct: 687 IEGAPHLKKEHLAIFDTANKCGSGNRFISPMGHILMVASIVPLISGSVSKTVNLP----- 741 Query: 706 SGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDG 753 ++ ++ ++K GVK TLY ++++ S Sbjct: 742 -KDASVEDFKNVIINSWKLGVKGITLYRDSSKESQPLNTSLDEASKTAPE 790 >UniRef50_D1ABC6 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=3 Tax=Actinomycetales RepID=D1ABC6_THECD Length = 1370 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 98/510 (19%), Positives = 171/510 (33%), Gaps = 54/510 (10%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV---------AACLFSNYPRETRLQY 192 +S AV + KY T E S + L V A F++ + Sbjct: 64 FWSVNAVNIVTSKYFRGAVGTPEREWSLKQLVDRVVKVYVDTGKAHGYFASDEDAEIFDH 123 Query: 193 VKRFYDAVSTFKISLPTPIMSGVRTPTR-QFSSCVLIECGDSLDSINATSSAIVKYVSQR 251 ++ A+ S +P+ V T + Q S+C ++ D+++SI Sbjct: 124 ELKY--ALIHQIFSFNSPVWFNVGTKSPWQVSACFILSVDDTMESILDWYKEEGIIFKGG 181 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGAATLFYPMWH 310 +G G+N RIR+ + +G + F + + + GG R A + + H Sbjct: 182 SGAGLNLSRIRSSKELL-SSGGTASGPVSFMRGADASAGTIKSGGATRRAAKMVVLDVDH 240 Query: 311 LEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLF---SPSDVPGLYDA 367 ++E + K + +R + L G+DIT + ++ + D Sbjct: 241 PDIEEFIWTKAREEDKIRALR---------DAGFDMDLGGKDITSVQYQNANNSVRVSDE 291 Query: 368 FFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD 427 F E E + + + V+A +LF M Q IQ D N + Sbjct: 292 FMRAVENDEEFGLRARLTGEVI-ETVRARDLFRAMAQAAWECADPGIQYDDTINDWHT-N 349 Query: 428 PAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI------NNLDELEEL 481 P + SN C E + + + C L++ NL ++ +L Sbjct: 350 PETGRITASNPCSEYM------------SLDNSSCNLASINLLKFLREDDTFDITRFVKL 397 Query: 482 AILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTH 541 L + A+D + + D+P R LGIG N L G Y +L Sbjct: 398 TELIITAMDISITFADFPTEKIAETTRAYRQLGIGYANLGALLMATGHAYDSEGGRSLAA 457 Query: 542 KTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYK--------KDLDTIANE 593 + + S ELA GA + A + +++D + Sbjct: 458 AITSLMTATAYRRSAELAGIVGAYDGYARNAEAHKRVMRKHAAANDQLRPLEEMDKAIHA 517 Query: 594 PLHYDWEALRESIKTHGLRNSTLSALMPSE 623 W + +G RN+ S L P+ Sbjct: 518 EATRQWSQCLALGEKNGYRNAQASLLAPTG 547 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 47/159 (29%), Gaps = 48/159 (30%) Query: 624 TSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPD------------------------ 658 T + + T GIEP K G ++V Sbjct: 978 TIGLMMDCDTTGIEPDLALKKFKKLVGGGSMEIVNHTVPRALRKLGYQQEQVEAIVEYIS 1037 Query: 659 ------------YEHLHDAYELLW--EMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRF 704 EH + ++ G+++++ +Q F+ +IS N Sbjct: 1038 EHGHVVDAPGLRPEHY-EVFDCAMGERAISPMGHIRMMAAVQPFLSGAISKTVNMPE--- 1093 Query: 705 PSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDA 741 ++ + K +K G+K +Y N + G + Sbjct: 1094 ---HATVEDIEKVYFEGWKMGLKALAIYRDNCKVGQPLS 1129 >UniRef50_D0J9D2 Ribonucleoside-diphosphate reductase n=2 Tax=Blattabacterium RepID=D0J9D2_BLASP Length = 571 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 130/642 (20%), Positives = 224/642 (34%), Gaps = 147/642 (22%) Query: 148 VKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISL 207 + ++G YL+ E+ Y ++ + + K+F++ + + Sbjct: 28 LTTIKGGYLLDG-------ETPFEAYKRLSENAAKILKK---PKIEKKFFNILWKGWLIP 77 Query: 208 PTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSP 267 TP+M + T SC GDS+ I + + G + IR++GSP Sbjct: 78 STPVMVNLGTEKGLPISCFSGRVGDSMYEIYRKNLEMAILSKHGGGTSYDFSLIRSVGSP 137 Query: 268 IR-GGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVE 326 I+ G G IPF K + +A+ + QG R GA ++ + H E L ++ +G Sbjct: 138 IKNGTLGTSDGIIPFVKSYDSAIIASKQGSTRRGAVAIYLNIEHQEYPEFLKIREPKGDI 197 Query: 327 GNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDD 386 + ++ GV ++ ++L Sbjct: 198 NRQCHNVHQGVILSNSFMEKVL-------------------------------------- 219 Query: 387 SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP--FDPAIAPVRQSNLCLEIAL 444 K+ K L+ ++ER TG Y+ D+ N + P + + SNLC EI L Sbjct: 220 ---KKNGKERSLWINTLKERVKTGEPYLFFKDNANRNLPENWKKNGLKIHHSNLCSEIML 276 Query: 445 PTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLD------YQDY 498 PT + + +C LS+ NL + + A+ LDA+L Sbjct: 277 PTDESHTL--------VCCLSSLNLYKYVEWKD-TQTVFYAILFLDAVLQEFINKGKNIK 327 Query: 499 PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNEL 558 I A R A R LG+G + + YL + + LTH F I+ KA+ L Sbjct: 328 GIEDAVRFAEKSRALGLGALGWHSYLQSEMIPFISVKSEILTHDIFGKIRSESQKATQYL 387 Query: 559 AKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSA 618 AKE G E+ + G G RN TL A Sbjct: 388 AKEYG------ESEWNIG--------------------------------TGRRNLTLMA 409 Query: 619 LMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPDYEHL--------------- 662 + P+ +S++++ + G+EP + + G+ + P E + Sbjct: 410 MAPNRSSAKLAGGLSQGVEPLAANIYVDDDAKGMHIRKNPYLEKILIKSGYNLPEVWEQI 469 Query: 663 -----------------HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 + + E+ + ++ I QK+IDQ S N + Sbjct: 470 ANEKGSCLGLTGLSEKEKNVFLCFKEINQLE-LIKQASIRQKYIDQGQSINLAF------ 522 Query: 706 SGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVP 747 P + + K L A+K G+K+LYY + Sbjct: 523 HQNTPAKFINKVHLEAWKIGLKSLYYYRSESILRAENTKSRD 564 >UniRef50_Q3KSU5 Ribonucleoside-diphosphate reductase large subunit n=5 Tax=Lymphocryptovirus RepID=RIR1_EBVG Length = 826 Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats. Identities = 143/784 (18%), Positives = 253/784 (32%), Gaps = 138/784 (17%) Query: 57 DIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYD 116 ++ +I + D P+ LA RL +++ YD Sbjct: 10 ELLSKLIDELKVKANAD-PEADVLAGRLLHR------LKAESVTHTVAEYLEVFSDKFYD 62 Query: 117 NHLLEDYTEEEFKQMDTFID---HDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLY 173 + + +E ++ F ++R ++ Y + + YL R + ES Q Y Sbjct: 63 EEFFQMHRDELETRVSAFAQSPAYERIVSSGYLSALRYYDTYLYVGRSGKQ--ESVQHFY 120 Query: 174 ILVAACLFSNY---------------PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP 218 + +A S E+ ++ +++ +++ + TP M Sbjct: 121 MRLAGFCASTTCLYAGLRAALQRARPEIESDMEVFDYYFEHLTSQTVCCSTPFMRFAGVE 180 Query: 219 TRQFSSCVLIECGDS--LDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHT 276 +SC+L S D A + +Y+ QRAG+G+ G I Sbjct: 181 NSTLASCILTTPDLSSEWDVTQALYRHLGRYLFQRAGVGVGVTGAGQDGKHIS------- 233 Query: 277 GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYG 336 + + V+ + G R + + WH ++ L K E R + G Sbjct: 234 ---LLMRMINSHVEYHNYGCKRPVSVAAYMEPWHSQIFKFLETKLPENHE--RCPGIFTG 288 Query: 337 VQINKLMYTRLLKG--EDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVK 394 + + +L + D LF P D L + EEFER Y + RV Sbjct: 289 LFVPELFFKLFRDTPWSDWYLFDPKDAGDLERLY---GEEFEREYYRLVTAGKF-CGRVS 344 Query: 395 AVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND 454 L ++ G +I + CN H D + +NLC E+ P++ Sbjct: 345 IKSLMFSIVNCAVKAGSPFILLKEACNAHFWRDLQGEAMNAANLCAEVLQPSRKS----- 399 Query: 455 ENGEIALCTLSAFNLGAI----------------------------------------NN 474 +A C L+ L + Sbjct: 400 ----VATCNLANICLPRCLVNAPLAVRAQRADTQGDELLLALPRLSVTLPGEGAIGDGFS 455 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 L L + A + A Q P ++ A ++G+GV A A G +Y+D Sbjct: 456 LARLRDATQCAT-FVVACSILQGSPTYDSRDMA----SMGLGVQGLADVFADLGWQYTDP 510 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKE-QGACPWFNETTYAKGILPIDTYKKDLDTIANE 593 + +L + FE + + L S+ + + P F ++ YA G + +I E Sbjct: 511 PSRSLNKEIFEHMYFTALCTSSLIGLHTRKIFPGFKQSKYAGGWFHWHDWAGTDLSIPRE 570 Query: 594 PLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILR 653 W L E I GL NS ALMP+ +Q++ ++ P S K + Sbjct: 571 I----WSRLSERIVRDGLFNSQFIALMPTSGCAQVTGCSDAFYPFYANASTKVTNKEEAL 626 Query: 654 QVVPD-----------------------YEHLHDAY---ELLWEMPGNDGYLQLVGIMQK 687 + E L Y + ++ + +Q+ Sbjct: 627 RPNRSFWRHVRLDDREALNLVGGRVSCLPEALRQRYLRFQTAFDY-NQEDLIQMSRDRAP 685 Query: 688 FIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLV 746 F+DQS S + L L+ +Y+ G+KT +YY A+ + Sbjct: 686 FVDQSQSHSLFLREEDA----ARASTLANLLVRSYELGLKTIMYYCRIEKAADLGVMECK 741 Query: 747 PSIQ 750 S Sbjct: 742 ASAA 745 >UniRef50_Q897Z5 Ribonucleoside-diphosphate reductase (Vitamin B12-dependent) n=3 Tax=Clostridium RepID=Q897Z5_CLOTE Length = 1047 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 122/816 (14%), Positives = 241/816 (29%), Gaps = 180/816 (22%) Query: 89 LRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTF----S 144 L K +F + + + ++ + L++ + ++ + + +D+ F S Sbjct: 13 LNKIIRRKFTKELEKNKNLTVYDLFNW--KLVDVFLKDH--KTGKVLVDMKDLEFPEHYS 68 Query: 145 YAAVKQLEGKYLVQNRVTGEI-YESAQFLY-ILVAACLFSN-------YPRETRLQYVKR 195 + + KY + V + YE++ + + S ++ + + Sbjct: 69 QNSCDIIASKYFRKAGVPNKYGYENSMKMVAHRMVNFWASALHEQGLLKTKDEKQIFYDE 128 Query: 196 FYDAVSTFKISLPTPIMSGVRT------------------------------PTRQFSSC 225 A+ + + +P Q S+C Sbjct: 129 MVYALLSQMYAPNSPQWFNTGLCMEYGIKGSPNGNYYYDENLKQVVESVDSYSRTQASAC 188 Query: 226 VLIECGDSL---DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFY 282 ++ D L SI+ K +G G N IRA G + G +G + F Sbjct: 189 FILSIEDKLLGSHSISDQYVNETKLFKGGSGTGTNFSTIRAKGEKLSG-GGVSSGLMSFL 247 Query: 283 KHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINK 341 K + GG R A + + H E+ + K + + M Y + I+ Sbjct: 248 KGLDRNAGAIKSGGTTRRAAKMVCLDIDHPEILDFITWKAREEDKVRALGKMGYDMDIDG 307 Query: 342 LMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY----TKYEKDDSIRKQRVKAVE 397 Y + + + ++ D F + + + + DS Q+VK + Sbjct: 308 EAYETV------SGQNSNNSIRFSDFFMEKVKNLDSMPDDTIELEGRVDSSVNQKVKVKD 361 Query: 398 LFSLMMQERASTGRIYIQNVDHCNTHS--------PFDPAIAPVRQSNLCLEIALPTKPL 449 L+ + Q D N + + +N C E A Sbjct: 362 LWDSFAKSTWMCADPAPQFSDTFNAWHTCPAGEDGNVNAKHNKINSTNPCGEYAF----- 416 Query: 450 NDVNDENGEIALCTLSAFNLGAINN-------LDELEELAILAVRALDALLDYQDYPIPA 502 + + C L++ N+ + L+ + L AL+A + + +P Sbjct: 417 -------LDNSSCNLASINIYKFYDGKEKNIDLESYLHVVGLVQLALEASIYWGQFPTKD 469 Query: 503 AKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQ 562 + R G+G+ N A L G Y+ A N++ + Y S+ +AKE Sbjct: 470 IAQKTYMFRATGLGITNLASLLMVLGYPYNSTEARNISSALVGLLTGYSYYISSLMAKEI 529 Query: 563 GACPWFNETT-------------------------YAKGILPIDTYKKDLDTIANEPLHY 597 G F+ Y + + + + + L Sbjct: 530 GTFEKFSINKPHMLKVIRNHAKVAGSINGLYEDLNYNPVKVDHNLLENIGFSDLSNLLKK 589 Query: 598 DWEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVV 656 W S + HG RN+ +S + P+ T S + IEP +V K G + V Sbjct: 590 SWLKALNSGEEHGYRNAQVSVIAPTGTISFAMDCGATSIEPFFSHVVYKKLSGGGMMTVT 649 Query: 657 PDYEHL---------------------------------------------------HDA 665 L + Sbjct: 650 NPVIELSLKNLGYSKEQIKDILQYVLEKEVVQTKEGFKYEKVLDGKIEGAPHLKKEHYAI 709 Query: 666 YELL------WEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLL 719 ++ G++++V + I +IS N ++ K +L Sbjct: 710 FDTANKCGSGKRYIEPMGHVKMVAALTPLISGAISKTVNLP------NNATIEDFKKVIL 763 Query: 720 TAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCE 755 +++ GVK + DG + +Q V + E Sbjct: 764 NSWELGVKGIALYR--DGCKASQPLNVSLSSEKDFE 797 >UniRef50_A5EVD2 Ribonucleotide reductase, alpha subunit n=30 Tax=root RepID=A5EVD2_DICNV Length = 573 Score = 350 bits (897), Expect = 1e-94, Method: Composition-based stats. Identities = 137/671 (20%), Positives = 228/671 (33%), Gaps = 156/671 (23%) Query: 129 KQMDTFIDHDR--DMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPR 186 ++ I DR + + L+ YL+ + + + Sbjct: 16 NKLLPMISSDRPDFFWLNDDSRLFLQRGYLLDGTSAEK----------RMKEIVARAAEI 65 Query: 187 ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVK 246 + +RF+ ++ S +PI S SC GDS+ I T++ + Sbjct: 66 LPFADFEQRFFHYLARGYYSFSSPIWSNFGLARGLPISCFGSYIGDSIYDIMRTTAEVGM 125 Query: 247 YVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFY 306 G G IR GS IR G F K F T + SQG R G + Sbjct: 126 MSKIGGGTSAYFGAIRPRGSDIRD-NGKSDGSFNFSKLFDTVIDVISQGTSRKGQFAGYI 184 Query: 307 PMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYD 366 + H ++E L + EGN ++ M YGV I+ + G+ Sbjct: 185 DIEHGDIEEWLDIHT----EGNPIQLMYYGVCISHQWLAEMKAGDS-------------- 226 Query: 367 AFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP- 425 + +++ ++Q ++ TG Y+ D+ N P Sbjct: 227 ---------------------------EKRRIWAKVLQRKSETGIPYLFFKDNANAGRPD 259 Query: 426 -FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAIL 484 + P+ SNLC EI LP E +C LS+ NL + L Sbjct: 260 VYKDLNLPIYASNLCTEIMLPAS--------EEESFVCCLSSMNLLYYEEWKN-TDAVEL 310 Query: 485 AVRALDALLD-----YQDYP-IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 V LDA++ D P + A+R AM R LG+GV+ + YL + +A Sbjct: 311 LVYFLDAVMTEFIEKSADLPFLERARRFAMRHRALGLGVLGWHSYLQSQHLPFDSLAAMQ 370 Query: 539 LTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYD 598 ++ F+ +Q L AS LA+ G Sbjct: 371 KNNEIFQLLQRKTLSASRTLAEHLGEP--------------------------------- 397 Query: 599 WEALRESIKTHGLRNSTLSALMPSETSSQISN-ATNGIEPPRGYVSIKA----------- 646 E ++ +G RN+TL ++ P+++SS I + +EP + +K Sbjct: 398 -----EILRGYGRRNTTLMSVAPTKSSSFILGSVSPSVEPLKSNYHVKDLAKIKTTYKNP 452 Query: 647 ---------------------SKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIM 685 DG ++ + + ++ E+ +Q Sbjct: 453 FLVALLAEKGLDTETTWESILLNDGSVQHLPDLSDEEKAIFKTFSEI-NQLSIIQQAAQR 511 Query: 686 QKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDL 745 QK+IDQ S N P P + + + LTA + GVK++YYQ++ A Q Sbjct: 512 QKYIDQGQSINLMIHP------DTPTRDINQLYLTAAELGVKSIYYQHSMSAA---QRFN 562 Query: 746 VPSIQDDGCES 756 + CE+ Sbjct: 563 RNLLHCQSCEA 573 >UniRef50_A2BL44 Ribonucleoside-diphosphate reductase n=2 Tax=Desulfurococcales RepID=A2BL44_HYPBU Length = 991 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 104/712 (14%), Positives = 210/712 (29%), Gaps = 159/712 (22%) Query: 75 PDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTF 134 P+ + A L + + + A + + + + + Sbjct: 19 PEAEEKAKELLLREIYAFVRKAYRELAPNGGRLVGLPECVEKDEICPE------------ 66 Query: 135 IDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVK 194 D F+Y A++ L +Y+V+N G E+ + VA + Sbjct: 67 -----DKGFTYNAIRVLLARYMVRNEY-GVPMETPSMVMARVAWGFSTRVDP-------V 113 Query: 195 RFYDAVSTFKISLPTPIMSGV--RTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRA 252 + Y + K +P + + S+C + D + +I ++ Sbjct: 114 KLYRLLIARKFMFNSPTLFNMYVDGAYGTLSACYVTPVYDDMKAIMDAATVQAMTFKWGG 173 Query: 253 GIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFY------ 306 G G + +R +R +G + F + + ++ QGG R GA Sbjct: 174 GQGFSFSELRPRWDIVRSTGGQASGPLSFMQIYDMVTETVKQGGKRRGANMGIMHAWHPD 233 Query: 307 ------PMWHL-----------------------------------------------EV 313 WH V Sbjct: 234 IYNPHFNPWHALRNMLPPQLKALIDTTKRLIEHLEREGYEIDPVYKEIVMRLSEEGWETV 293 Query: 314 ES--LLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFAD 371 E + K + N + + + V N +L+GED + +P + Sbjct: 294 EDAGFIQAKEPPLQDAN-LTNFNISVAANDAFMQAILRGEDWWMVNPRYSDSGDGVYRLH 352 Query: 372 QE--------------------------------------------EFERLYTKYEKDD- 386 + + YT +E Sbjct: 353 YSVSRATGLGRLGELLERYPWLLENPYLNIFEDVLEEAKTKALEALKEQARYTGWETSPE 412 Query: 387 --SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIAL 444 + + A +L+ +++ ++G + D+ N +P P + V +N C E L Sbjct: 413 QKNPYAWKYPARKLWEKIVENAWASGDPGLFFPDNHNKWNP-TPWLGAVYATNPCGEQPL 471 Query: 445 PTKPLNDVNDENGEIALCTLSAFNLGAI-----NNLDELEELAILAVRALDALLDYQDYP 499 C L + ++ +L + LAV ++DA++D+ +P Sbjct: 472 YP------------FESCNLGSMSIDKYISDGKFDLAQFMSDIQLAVDSMDAVIDFNKHP 519 Query: 500 IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELA 559 P R +G+G++ A LAK G Y A T A++ Y K S EL Sbjct: 520 DPRQTVANKFTRKIGLGIMGLADALAKLGYPYDSEEAVAFTLIVMAALEVYSWKRSWELG 579 Query: 560 KEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSAL 619 + G P F Y + + + + + ++ L+ + Sbjct: 580 AKLGHAPAFECRRYDWKSMRCVEKAEPEELVELHTPALLKASRISRVEDGWLKVCYHAVE 639 Query: 620 MPSETSSQISNATNG-IEPPRGYVSIKASKDGILRQVVPD-YEHLHDAYELL 669 +P + ++ IEP ++K + + +V+ + + + YE Sbjct: 640 IPEDMLERLVGEAKSRIEP---NGTVKLVRWEAVEKVLREVFGVTREDYERA 688 Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 62/197 (31%), Gaps = 66/197 (33%) Query: 599 WEALRESIKTHGLR---NSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQV 655 W+ L+ ++ G R N+ ++ + P+ T S I+ ++GIEP V + G +V Sbjct: 715 WKVLKAYGRSLGARAPRNTVMTTVAPTGTISIIAGTSSGIEPYFALVYRRVVAIGEFLEV 774 Query: 656 VPDYEH---------------LHDAYELLWEMP---------GNDGYLQL---------- 681 V + + YE + + +Q+ Sbjct: 775 VKPFREKLLEAARRYNVPLDAVKVVYETIGRHKGSLRWALGEVREKLIQMGIMNGFLAEV 834 Query: 682 ---------------------VGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 Q ++DQ+IS N ++ L Sbjct: 835 EKLARLFTMSMDFDLWYHLAHQIAAQLYVDQAISKTINL------RKDATKDEVYTAYLV 888 Query: 721 AYKFGVK--TLYYQNTR 735 A+ G+K T+Y ++ Sbjct: 889 AWLGGLKGVTVYRDESK 905 >UniRef50_Q8UEM4 Vitamin B12-dependent ribonucleotide reductase n=163 Tax=root RepID=NRDJ_AGRT5 Length = 1272 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 104/758 (13%), Positives = 186/758 (24%), Gaps = 195/758 (25%) Query: 92 KAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQL 151 + +F P + + + + D D FS A L Sbjct: 2 RIERRFTKPGQSSYAEIEFRKAV------SEIKNPDGSVVFRLADIDVPAQFSQVATDVL 55 Query: 152 EGKYLVQNR----------------------VTGEIYESAQ-----------FLYILVAA 178 KY + + E + ++ +A Sbjct: 56 AQKYFRKAGVPKLLKKVEENDVPSFLWRSVADEKALKELPEAERYGSETDARQVFDRLAG 115 Query: 179 CLFSN-------YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRT-------------- 217 E + ++T +++ +P Sbjct: 116 TWAYWGWKGKYFSTEEDASAFKDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHF 175 Query: 218 ----------------PTRQFSSCVLIECGDSL---DSINATSSAIVKYVSQRAGIGINA 258 Q +C + D L I + +G G N Sbjct: 176 YVDPFTGKLTKSKSAYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNF 235 Query: 259 GRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLL 317 +R G + G +G + F K A + GG R A + H ++E+ + Sbjct: 236 SYLRGEGEKLSG-GGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYI 294 Query: 318 V-------------------------------------------LKNNRGVEGNRVRHMD 334 KN R D Sbjct: 295 DWKVNEEQKVAALVTGSKIVAKHLKAIMKACVNCEADNGDCFDPAKNPALKREIRAAKKD 354 Query: 335 YGVQINKLMYTRLLK--------------GEDI--------TLFSPSDVPGLYDAFFADQ 372 + + R+++ D + + ++ L D F Sbjct: 355 ---MVPENYVKRVIQFAEQGYKDIQFKTYDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAV 411 Query: 373 EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP 432 E KD + +KA +L+ + ++ + N PA P Sbjct: 412 ENDGNWNLTARKDGK-VMKTLKARDLWEKISHAAWASADPGLHFNTTMNDWHT-SPAEGP 469 Query: 433 VRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-------NNLDELEELAILA 485 +R SN C E + C L++ NL ++ + E L Sbjct: 470 IRASNPCSEYMF------------LDDTACNLASLNLLQFKDAKTKRIDIADYEHAVRLW 517 Query: 486 VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFE 545 L+ + +P + RTLG+G N L G Y + Sbjct: 518 TVVLEVSVMMAQFPSRQIAERSYEYRTLGLGYANIGGLLMSSGIPYDSDEGRAIAGALTA 577 Query: 546 AIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDT----------------------Y 583 + S E+A E G P F + + + Sbjct: 578 IMTGVSYATSAEMAGELGPFPSFAPNRDNMLRVIRNHRRAAHGQSEGYEGLSVNPVALIH 637 Query: 584 KKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYV 642 D W+ E + HG RN+ + + P+ T + + T GIEP V Sbjct: 638 ADCTDQDLVAHATAAWDKALELGEKHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALV 697 Query: 643 SIKASKDGILRQVVP--DYEHLHDAYELLWEMPGNDGY 678 K G +++ E L ++ + Y Sbjct: 698 KFKKLAGGGYFKIINRAVPESLRSLGYSESQIAEIEAY 735 Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 676 DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQN 733 + +++++ Q FI +IS N ++ + ++K +K LY Sbjct: 863 ESHIRMMAAAQPFISGAISKTINMP------NDATVEDCGAAYMLSWKLALKANALYRDG 916 Query: 734 TR 735 ++ Sbjct: 917 SK 918 >UniRef50_Q3JIM4 Ribonucleoside reductase, intein-containing n=47 Tax=Burkholderia RepID=Q3JIM4_BURP1 Length = 639 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 106/630 (16%), Positives = 192/630 (30%), Gaps = 79/630 (12%) Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPT 209 +Y + S VA L P TR +RFY + Sbjct: 59 VFADRYALPGE------HSRAQACARVARALALAEPMATRSGAARRFYRNLLNGAFG-AG 111 Query: 210 PIMSGVRT-PTRQFSSCVLIEC---------GDSLDSINATSSAIVKYVSQRAGIGINAG 259 IM+ P + +SC + +LD ++ A IG + Sbjct: 112 RIMARAGAAPDQTMASCFVHPIRAPAALTRFHPNLD---EALDEARLALAMGADIGYDFS 168 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 I G+ G F + R A H ++ + Sbjct: 169 AIPPAGARPDADHPDSPGVCAALDRFDRIGTQAGERDGRRRAQLAVLRCDHPDLLAFAAA 228 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS---PSDVPGLYDAFFADQEEFE 376 K+ R ++ V + + TL P D PG Sbjct: 229 KHRHAGRHARWTTLELAVAATDAFMQAVEQDLPWTLRHTAPPRDAPG------------- 275 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 D + V A ++ ++ + VD + P + + Sbjct: 276 --GALPGADGAWTYASVPARHVWREIVSAARDGAGPGLVFVDAIDAADPLR-GRERIDAT 332 Query: 437 NLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQ 496 + C LP + + + + + + VR LD LD Sbjct: 333 SPCGAQPLPPYGSAMLGAIDLSRFVRNPFGAGGEPRFDFAAFDTAVRIEVRLLDNALDVT 392 Query: 497 DYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASN 556 +P+ A R + +R +G+GV A LA RY +A + ++++ AS Sbjct: 393 RWPLAAHARESYQKRRIGVGVTGLADMLAMMRLRYDSPAAREMARYIASDLRHHAYAASA 452 Query: 557 ELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTL 616 ELA E+GA P + + L P A+ +I+ GLR+S L Sbjct: 453 ELAAERGAYPLCDR----------HAHLDALRAGPPLP-----HAVCHAIERDGLRHSHL 497 Query: 617 SALMPSETSSQISN--ATNGIEPPRGYVSIKASKDG---------------ILRQVVPDY 659 ++ P S + GIEP R ++ + + G + R + + Sbjct: 498 TSFAPVIGVSLAFGDHCSPGIEPARAWIEHRPVRAGAAGAPGMRAENHAHRLFRSLRGER 557 Query: 660 EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLL 719 L D + ++ + L + +Q ++D I ++++ L Sbjct: 558 AALPDYFATDADVAPGER-LAMRVALQPYVDAGIDNTLTLA------NHYSLEEVNALLF 610 Query: 720 TAYKFGVKTLYYQNTRDGAEDAQDDLVPSI 749 A++ +K++ + D A DAQ + Sbjct: 611 AAWRAKLKSVAIRRA-DLARDAQPSDDDGV 639 >UniRef50_UPI000155436D hypothetical protein ORF029 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155436D Length = 563 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 122/681 (17%), Positives = 229/681 (33%), Gaps = 164/681 (24%) Query: 120 LEDYTEEEFKQMDTF-IDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAA 178 + + +E K++ + + + + + KYL + R + YE +A Sbjct: 4 IYEKLSQERKELQAQGLVPEW---MTTGGWQLFKEKYLWEARGLKDTYE-------RIAK 53 Query: 179 CLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSIN 238 + ++ +F+D + ++ TP++S + T SC DS+D Sbjct: 54 TAAQ--HTDDPDKWAAKFFDVLWRGWLAASTPVLSNMGTIKGMPVSCSGQYIEDSIDGFY 111 Query: 239 ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVR 298 + G G IR GS I +G +P +KHF ++ +QG R Sbjct: 112 SAYHETAMLTKNGFGTSGYLGDIRPRGSII-STGGKASGTLPIFKHFVQDMRDVAQGTSR 170 Query: 299 GGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSP 358 GA + P+ H + ++ N + ++ G +++ RL G+ Sbjct: 171 RGAWAGYLPIDHGDFYEIVDYLKNFPDD------LNIGWNLSQAFIDRLEVGD------- 217 Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVD 418 V AV+ F M +A TG+ Y D Sbjct: 218 ----------------------------------VDAVQRFQRAMYVKAITGKGYFFKPD 243 Query: 419 HCNTHSP--FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLD 476 N +P + V+ SNLC EI L + + C LS+ NL + Sbjct: 244 TVNAMNPQVYKDRGLEVKASNLCTEITLFSDEDH--------TFTCVLSSMNLEKYDEWK 295 Query: 477 ELEELAILAVRALDAL------LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530 + ++ LD + L + R R LG+G + F YL Sbjct: 296 N-TDAVFVSTVFLDCVAQEFIRLAKGQKGFEKSVRFTEASRALGLGALGFHTYLQAKMIP 354 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTI 590 A+ + + F+ + +A+ +AK G W Sbjct: 355 LESFEAHMINLEIFQHLHEEATRATKWMAKAWGEPEWCKG-------------------- 394 Query: 591 ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKASKD 649 +G+RN+ L A+ P+ +S+ I + GIEP + + + Sbjct: 395 ------------------YGVRNTHLLAIAPNTSSALICGGVSQGIEPVVANLYNQPTSA 436 Query: 650 GILRQVVPDYEHL--------------------------------HDAYELLWEMPGNDG 677 G + +V P + +L ++ +E+ Sbjct: 437 GEIYRVNPVFLNLAKKRVGWTDELVKDLIKSEGSVQHLDWLSPKEKAVFKTAYEVD-QAA 495 Query: 678 YLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDG 737 ++L Q +I Q+ S N +D + + + Q+ K+ L + +K+LYY T+ G Sbjct: 496 LVRLAAARQPYICQAQSINLFFDANE---SEAYIAQIHKEALLNPQ--IKSLYYMRTKAG 550 Query: 738 AEDAQDDLVPSIQDDGCESGA 758 + ++ CE+ + Sbjct: 551 VQASKG---------ECEACS 562 >UniRef50_C6BZ68 Ribonucleoside-diphosphate reductase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZ68_DESAD Length = 894 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 110/719 (15%), Positives = 214/719 (29%), Gaps = 143/719 (19%) Query: 153 GKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIM 212 KY +++R S + + N E ++ + + + + I+ Sbjct: 29 KKYQIRDRKGRLQEHSFNDVKNRLCREFLKNSQFEKNEN--EQVCELLQSGRFIPAGSIL 86 Query: 213 SGVRTPTR--QFSSCVLIECG-DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIR 269 SG+ S+C L + DSL+ I + + S R G GI+ +R G P+ Sbjct: 87 SGLGNEHAKCSLSNCYLAKIESDSLEGIFEAQKKLARTYSYRGGSGIDITILRPSGDPVN 146 Query: 270 GGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGV---- 325 +G + F F + Q G R GA + + H E + K+ Sbjct: 147 NAAVTSSGAVSFMPLFSELTNTIGQNG-RRGALMISIDIRHPETRRFIWCKSKPEEIFGV 205 Query: 326 -----EGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPS------------------DVP 362 + V + +++ + + +D T P +V Sbjct: 206 DSLTGKVQDVFGANISLKVTDEFMQAVEEDKDWTFIFPDRFKISGKIINESTLQLLPEVY 265 Query: 363 GLYDAFFADQEEFERLYTKYEKDDSIRKQRV-------------KAVELFSLMMQERAST 409 D+ E E Y D + +V L ++ ++R T Sbjct: 266 EALSPQVGDRIEAEITYKVIGIDSKKHQIKVQPDLPINEDSTALSEENLTFILSRKRNET 325 Query: 410 GRIY------------------------IQNVDHCNTHSPFDPAIAPVRQSN----LCLE 441 I+ ++ D + +S L + Sbjct: 326 SDIFDPVKSVYNTLWDGDYSRWQELGLPLRKYDTVKARDLLEEISESAWKSGDPGILYQD 385 Query: 442 IAL--------------PTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDE 477 P G + C L A L + D Sbjct: 386 TTQRNTPGTYIDPLRLKPMSTNPCGEQALGYWSNCLLGAMVLYRYVVNPFTKEARFDSDL 445 Query: 478 LEELAILAVRALDALLDYQD--YPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGS 535 + + +D + D +P+ + + +GI LA G RY Sbjct: 446 FHDDLTRTMAFMDTMSDLNQNKHPLQKHRDADKYGKRIGIEFTGLGDMLAMLGMRYGSEE 505 Query: 536 ANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPL 595 + + + S +A+ G +T A+ Y L Sbjct: 506 SIEFIKEIMRDKAITEISVSANIAERFGEVEAL-KTKDARQRFLDCPYISKLGLP----- 559 Query: 596 HYDWEALRESIKTHGLRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKASK--DGIL 652 L++ I GLR++ + + PS + S +S N T+GIEP + + ++ G + Sbjct: 560 ----NKLQKKILKTGLRHTAFNTVGPSGSISIMSDNCTSGIEPVFMFSYARETRLEAGKV 615 Query: 653 RQVVPDYEHLHDAYELLWEMPG---------------------NDGYLQLVGIMQKFIDQ 691 + + L E E +++ +Q++ D Sbjct: 616 FEFIHMPP-LKWMLETNQEHLFGKYTALQLKEKLNYVQADELDYMDRIRMQAAIQQYTDS 674 Query: 692 SISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPS 748 SIS+ N + P + + + L ++K G+K T++ + G ++D + Sbjct: 675 SISSTINLAE------ETPKETIFEIYLESWKHGLKGVTVFRNGCKKGVLSKKEDSKEA 727 >UniRef50_D2XAL3 Ribonucleoside diphosphate reductase alpha subunit n=1 Tax=Marseillevirus RepID=D2XAL3_9VIRU Length = 916 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 96/393 (24%), Positives = 164/393 (41%), Gaps = 24/393 (6%) Query: 51 DGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMV 110 D S+ ++ + S PD+ LA R I L + +F A Sbjct: 29 DACTDSEFFKSFSEVCVFK-SFIHPDWGVLAGRAEIRKLWSETPEKFSQMAK-------- 79 Query: 111 EMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTG---EIYE 167 M + ++ +++D H+RD F + A+ LE YL++ + ++E Sbjct: 80 GMKSVLDEKFYEFVASHSQELDNICSHERDNRFDWMAINTLEKSYLLKKKCFDGKLRVFE 139 Query: 168 SAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVL 227 Q +Y+ VA L+ +Q +K FYD +S ++ +PI SSC L Sbjct: 140 RPQHMYLRVATQLWM-----PDVQKIKEFYDGLSLGFYTVASPIFFNAGLKKFSGSSCFL 194 Query: 228 IECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQT 287 + D L I T + S+ G+G +A +R S I GG +G + + Sbjct: 195 GKIPDDLIGIIDTWKQMAIISSRSGGVGYSASSVRH--SDIGGGLGESSGVVSLLRVPDA 252 Query: 288 AVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRL 347 + QGG R G+ T F WH+++ + + K G + + R + Y + + L R+ Sbjct: 253 VLGYVDQGGRRKGSGTFFLACWHIDIFTFVDAKKPGGDDLKKARQLFYAIWTSDLFMKRV 312 Query: 348 LKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERA 407 + +LF P + PGL + + ++FE LY +YEK+ R VKA EL+ ++ +A Sbjct: 313 ETDGNWSLFCPKEAPGLDEIY---GKDFEDLYERYEKEGRAR-TTVKAQELWHHILVAQA 368 Query: 408 STGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 G +I D + NLC+ Sbjct: 369 EVGMPFIVYKDAICRKNN-QKHTGIPHSLNLCV 400 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 80/399 (20%), Positives = 126/399 (31%), Gaps = 100/399 (25%) Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN-------LDELEELAILAVRALDA 491 CLEI T + EIA C LS+ L + + L VR+L+ Sbjct: 538 CLEITENTS--------DEEIASCNLSSVCLNSFVDKESKKYDFGALASSVRFIVRSLNN 589 Query: 492 LLDYQDYP--IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 ++D YP +P+ K + R LGIGV A A + D A NL K FE + + Sbjct: 590 VVDRNYYPSELPSIKTTNLRHRPLGIGVQGLADTFAMMDICWGDEEARNLNRKIFETMYH 649 Query: 550 YLLKASNELAKEQGA-------CPWFNETTYAKGILPIDTYK------------------ 584 + S +++KE+ + F + +KG D + Sbjct: 650 AAVTESRKISKERASLGFQTPYYETFPGSPLSKGFFAHDLWDAEALHKESGIPFDSITVE 709 Query: 585 -----KDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPR 639 + I +DW+ R G+ NS L ALMP+ +++QI E Sbjct: 710 QVKSYRKKKGIPESFCGFDWDKERLETMRDGVYNSLLIALMPTASTAQILRNNESFEAFT 769 Query: 640 GYVSIKASKDGILRQVVPDY---------------------------------------E 660 + + G V + E Sbjct: 770 SIIGKRTVLSGAFAVVNRHFIDDMIGLGVWNKKNMLICLKGQGSVQGITTDDITKFERLE 829 Query: 661 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 H+ Y +E+ QL +++ QS S N Q+L Sbjct: 830 HIKRKYLNAFELS-QKRLCQLGIDRSRYVCQSSSHNCFMRNP-------TYQKLTSYHFF 881 Query: 721 AYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 ++ G KT +YY T V + C + Sbjct: 882 QWENGAKTGMYYLRTSAPGVA-----VSVAAEAECLMCS 915 >UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus barophilus MP RepID=B5IVI5_9EURY Length = 1042 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 75/494 (15%), Positives = 150/494 (30%), Gaps = 95/494 (19%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVS---ISQVELRSH---IQFYDGI--KTSD 57 V KRDG + +I + A + + +V + YDG + Sbjct: 5 KVMKRDGRIVPFDEGRIRWAIQRAMWEVGVRDEKLLDKVVKDVVGRINELYDGKIPHIEN 64 Query: 58 IHETIIKAA-------------------------------ADLISRDAPDYQYLAARLAI 86 I + + D + + A R+ Sbjct: 65 IQDIVELELMRNGLFDVAKAYILYRKKKAEIREEKKKILNKDKLDEIDKRFSINALRVLA 124 Query: 87 -FHLRKKAYGQ--FEPPALYDHVVKM--VEMGKYDNHLLED------------YTEEEFK 129 +L K G+ P L++ V + + YD+ + Y E Sbjct: 125 SRYLMKNEEGKIIESPRELFERVAILAVIPDLLYDDRVFSKEGGFAQDLKRVDYYREHLD 184 Query: 130 QMDTFIDHDRD--MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRE 187 + D + R + + L + + ++ I E + ++ F Y +E Sbjct: 185 EFDKKLSIGRFKLNKYHFERFLSLYQELAEKGQMKVSIDE----IVKMLEDGAFDKYEKE 240 Query: 188 TRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKY 247 ++ ++ ++ TP + P S+C ++ D ++SI + + Sbjct: 241 -----IEEYFRLMTNQIFMPNTPALINAGRPLGMLSACFVVPIEDDMESIMKAAHDVAMI 295 Query: 248 VSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYP 307 G G+N ++R G + +G + F QGGVR GA Sbjct: 296 QKMGGGTGVNFSKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILE 355 Query: 308 MWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDA 367 +WH ++E + K + N + + + V I + + L +G L +P + Sbjct: 356 VWHPDIEKFIHAKEKN-IGTNVLSNFNISVGIWEDFWEALKEGRKYPLINPRTGKKV--- 411 Query: 368 FFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD 427 + V LF + + + D N + + Sbjct: 412 -----------------------REVDPKALFEELAYMAWAKADPGVVFFDVINRRNVLE 448 Query: 428 PAIA-PVRQSNLCL 440 A +R +N C+ Sbjct: 449 KAKGQKIRATNPCV 462 Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 71/339 (20%), Positives = 128/339 (37%), Gaps = 58/339 (17%) Query: 441 EIALPTKPLNDVNDEN-GEIALCTLSAFNLGAI----------NNLDELEELAILAVRAL 489 E + + +E E C L++ NL + DE + + L Sbjct: 603 EYVANSIISRNCGEEPLYEYESCNLASINLAKFVKYDDEGKPYFDWDEYAYVIQKVAKYL 662 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 D +D +P+P R +G+G++ A L K G Y+ + K E + + Sbjct: 663 DNSIDVNKFPLPEIDYNTKLTRRIGVGMMGLADALFKLGIPYNSKEGFDFMRKATEYLTF 722 Query: 550 YLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH 609 Y K S E AK++G P ++++ Y +G LP++ + E + W+ L E IK + Sbjct: 723 YAYKYSVEAAKKRGTFPLYDKSDYPEGKLPVEGF------YHREIWNLPWDELAEEIKKY 776 Query: 610 GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVP------------ 657 G+RN+ ++ P+ + S I++ ++GIEP V K+ G V P Sbjct: 777 GVRNAMVTTCPPTGSVSMIADTSSGIEPIFALVYKKSVTVGEFYYVDPVFEAELKKRGLY 836 Query: 658 --------------------DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANT 697 E + + ++ D ++ +Q ++ S S Sbjct: 837 SDELLAKISNNYGSVQGLEEIPEDMQRVFVTAMDVHWLD-HILAQASIQLWLTDSASKTI 895 Query: 698 NYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNT 734 N ++ + L AYK G K T+Y + Sbjct: 896 NMP------NDATVEDVKAAYLLAYKLGCKGVTVYRDGS 928 >UniRef50_C9DFZ9 Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Deftia phage phiW-14 RepID=C9DFZ9_9CAUD Length = 711 Score = 321 bits (822), Expect = 7e-86, Method: Composition-based stats. Identities = 122/682 (17%), Positives = 214/682 (31%), Gaps = 142/682 (20%) Query: 129 KQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRET 188 + + ID R + + + YL+ + E+ Q A SN Sbjct: 4 EYLGIIIDETR----TDTSKGRTASNYLITQHYS-RPGETIQQTIARAAVAWSSN----- 53 Query: 189 RLQYVKRFYDAVSTFKISLPTPIMSGVRTP----TRQFSSCVLIECGDSLDSINATSSAI 244 L + +R YD S +P S P SC L + DS+ + + + Sbjct: 54 -LAHAQRLYDYASKDDFIWASPAFSNATLPGEKIRAMPISCFLPDVPDSVPGLLYQKAEL 112 Query: 245 VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL 304 G+G N G IR G IPF +A+ + QG +R GA + Sbjct: 113 SLLSVLGGGVGQNFGGIR-------SVSDKAPGPIPFIAENDSAILAWKQGKIRRGALSA 165 Query: 305 FYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKG-EDITLFSPSDVPG 363 + H + + ++ G + ++ +G + ++ G E + L P Sbjct: 166 NLGVTHPDTMEFMRIRVPTGDIERKSLNIHHGFNVTDEYMQAVVDGIETLPLIDP----- 220 Query: 364 LYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTH 423 + + E F M+ R+ TG ++ +D + Sbjct: 221 ----------------------TGKQVGSMNPREHFREMVTVRSRTGEPFMYFIDRAQEY 258 Query: 424 SPFDPAIAPVRQ--SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDE-LEE 480 + + +N+C EI L +C L + N + +E Sbjct: 259 LSLPQKLIGMACKATNICTEITLAATK--------DRTPVCCLCSINAERYEDFKPYYQE 310 Query: 481 LAILAVRALDALL--------------------DYQDYPIPAAKRGAMGRRTLGIGVINF 520 + + LD ++ D + K+ A R++G+GV+ Sbjct: 311 MVSDLIEMLDNIIEFFVQNVEKVAEGYADQLDRDLIRLLVQKVKKSAECERSVGLGVMGL 370 Query: 521 AYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPI 580 AY L + ++ + + F ++ + AS L E+G P I Sbjct: 371 AYMLQRADMVFAGEDSREYELEFFRQLKDFSHAASCRLGIERGVPPD------------I 418 Query: 581 DTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRG 640 Y + + EP Y W RN L A+ P+ SS I N + IE Sbjct: 419 QAYLEKCKELGIEPDPY-WVN---------RRNLHLLAIAPNANSSVILNTSASIEFMYS 468 Query: 641 YVSIKASKDGILRQVVPDYEHL--------------------------------HDAYEL 668 V + + G E L Y + Sbjct: 469 NVYSREMRTGTFEVRNRYLEKLLESQGRNTEEVWNQIKADSGSVKGLDFLTEHQKRVYAV 528 Query: 669 LWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT 728 EM D ++ G Q +I Q+ S N + P + ++ + A+K GVK+ Sbjct: 529 PEEMNMMDVVVR-AGERQVYICQAQSLNLFFPPGSDINF------VMAVHILAWKVGVKS 581 Query: 729 LYYQNTRDGAEDAQDDLVPSIQ 750 LYY T + + + Sbjct: 582 LYYYKTESEVKIEKPSDKTERE 603 >UniRef50_Q3AEA3 Ribonucleoside-diphosphate reductase n=2 Tax=Bacteria RepID=Q3AEA3_CARHZ Length = 1101 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 111/302 (36%), Gaps = 35/302 (11%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRE---TRLQYVKRFYD 198 + A+K LE +YL +N GE+ E+ + ++ VA + + + FY+ Sbjct: 3 KLTENALKVLEARYLARNE-KGEVIETPEEMFWRVARAIAQAEKNYAENDEEEIAREFYN 61 Query: 199 AVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINA 258 ++ TP + P Q S+C ++ GDS++ I G G + Sbjct: 62 FMTALDFLPNTPTLVNAGRPLGQLSACFVLPVGDSMEEIFDAVKYSALIHKSGGGTGFSF 121 Query: 259 GRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLV 318 R+RA G+ +R +G + F K F A ++ QGGVR GA H ++ + Sbjct: 122 SRLRAKGARVRSTGGIASGPVSFMKVFNAATEAVKQGGVRRGANMGVLRCDHPDILEFIT 181 Query: 319 LKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERL 378 K + + + + V + L + + L PS Sbjct: 182 AKEDN----RDITNFNISVALTDKFMKALEEDGEYELIEPST------------------ 219 Query: 379 YTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNL 438 R++A E+F + + G + +D N + P + + +N Sbjct: 220 --------GEVVGRLRAREVFERIARNAWKNGEPGVIFIDRINAANVV-PELGEIESTNP 270 Query: 439 CL 440 C+ Sbjct: 271 CV 272 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 73/352 (20%), Positives = 123/352 (34%), Gaps = 89/352 (25%) Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELAILAVRALDALL 493 C E L C L + NL + + + LE+ LAVR LD ++ Sbjct: 616 CGEQPLLP------------YESCNLGSINLANMVKDGEIDWEHLEKTVKLAVRFLDNVI 663 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 D YP+P ++ R +G+GV+ FA L K Y A NL K E I + Sbjct: 664 DVNHYPLPEIEKMTKKTRKIGLGVMGFADMLIKLNIPYDSEEALNLADKVMEFINKKSKE 723 Query: 554 ASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 AS ELA+ +G P + ++ +AK L LRN Sbjct: 724 ASAELARVRGTFPAWKKSVWAKKGLK-------------------------------LRN 752 Query: 614 STLSALMPSETSSQISNATNGIEPPRGYVSIKAS-------------------------- 647 +T + + P+ + S I+ ++GIEP + Sbjct: 753 ATTTTIAPTGSISIIAGVSSGIEPVFALAFKRHILDRKDIVEVHRLFEQHARENGYYSEK 812 Query: 648 ------KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDP 701 K G + + E + ++ + ++++ + QK D ++S N Sbjct: 813 LMNEVAKTGRITGIAGVPEEAKRLFVTALDIA-PEWHVKMQAVFQKHTDNAVSKTINMPN 871 Query: 702 SRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQD 751 S ++ + + L AYK G K T+Y +R+ + Sbjct: 872 S------ATVEDVKESYLLAYKLGCKGLTVYRDGSREEQVLNAGLNETKKDE 917 >UniRef50_UPI00019240FD PREDICTED: similar to ribonucleotide-diphosphate reductase large subunit, putative, partial n=1 Tax=Hydra magnipapillata RepID=UPI00019240FD Length = 416 Score = 317 bits (813), Expect = 8e-85, Method: Composition-based stats. Identities = 100/400 (25%), Positives = 159/400 (39%), Gaps = 62/400 (15%) Query: 389 RKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKP 448 +++KA +L+ +++ ++ TG YI D+ N S + +R SNLC EI + Sbjct: 1 YVRQIKARDLWRHILEAQSETGFPYILYKDNSNIKSN-QKNLGTIRSSNLCAEIIQYSDE 59 Query: 449 LNDVNDENGEIALCTLSAFNLGAI---------NNLDELEELAILAVRALDALLDYQDYP 499 E A+C L++ L N D+L ++ +AVR LD ++D YP Sbjct: 60 H--------ETAVCNLASICLPMFIETNNNVKIYNFDKLGKVCRVAVRNLDKIIDRNYYP 111 Query: 500 IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELA 559 KR + R +GIG A G +S SA L K FE I + + S ELA Sbjct: 112 TEKTKRSNLRHRPMGIGAQGLADVYNIMGFGFSTHSAYELNKKIFETIYFACIDESKELA 171 Query: 560 KEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSAL 619 K+ G F + ++G L + + D + + +DW+ L +K +GLRNS L+AL Sbjct: 172 KKFGQYSTFKGSPASQGQLQFHMWGFNEDQL---LMGFDWKTLISEVKKYGLRNSLLTAL 228 Query: 620 MPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVP---------------------- 657 MP+ ++SQI + IEP + +++ G + Sbjct: 229 MPTASTSQIMGNSECIEPYMSNIFKRSTLAGEFIVINKHLMKDLIHLNLWNDDMRKRIII 288 Query: 658 ----------DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSG 707 E L + YE +E ++ FIDQS S N F Sbjct: 289 ENGSVQNIELIPEKLKNVYETAFETK-QMHIVRQSADRGIFIDQSQSLNLFMAEPDF--- 344 Query: 708 KVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLV 746 L L ++ G KT +YY + + Sbjct: 345 ----DVLTSALFESHDIGNKTGMYYYRSLPAINPISFGID 380 >UniRef50_D1JF25 Ribonucleoside-diphosphate reductase n=1 Tax=uncultured archaeon RepID=D1JF25_9ARCH Length = 919 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 119/329 (36%), Gaps = 38/329 (11%) Query: 117 NHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV 176 ++ + + + + D+ S A + L+ +YL+++ + + E+ ++ V Sbjct: 4 PYISYHQQRADIQGLKKLLSDKSDLNLSANAAEVLKRRYLLKDEL-ERVIETPSQMFARV 62 Query: 177 AACLFSNYPRETRLQYV-----KRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECG 231 A + + + +RFY + + + +P + T Q ++C +I Sbjct: 63 AKAIARAEQNYGKSKAEVKKIEQRFYLLMHSLEFLPNSPTLMNAGTDLGQLAACFVIPVE 122 Query: 232 DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKS 291 DS++ I + + G G + R+R G ++ +G + F + F A Sbjct: 123 DSIEGIFGAVKDMARIHQSGGGTGFSFSRLRPKGDVVKSTGGVASGPVSFMRVFDVATDV 182 Query: 292 CSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 QGG R GA H ++ + K E + + V + + + E Sbjct: 183 IKQGGKRRGANMGIICADHPDILEFIRAK-----ERGEFANFNTSVAVTDEFMHAVDRNE 237 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR 411 + L +P + +++KA E+F+ ++ G Sbjct: 238 EYELINPRTKEEV--------------------------RKIKAGEVFNEIVTYAWKIGD 271 Query: 412 IYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 I +D N H+P + + +N C+ Sbjct: 272 PGIIFLDEINRHNPVSA-VGRIEATNPCV 299 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 63/381 (16%), Positives = 120/381 (31%), Gaps = 99/381 (25%) Query: 424 SPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDEL 478 + FD V C E L C L + N+ + + L Sbjct: 593 NAFDANGFIVHN---CGEQPLLPYD------------SCNLGSINVSKFVENGEIDWERL 637 Query: 479 EELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANN 538 +E +VR LD ++D YP+ ++ R +G+G++ A L K Y A Sbjct: 638 KEAVWSSVRFLDDVIDENRYPLSKIEKMTKANRKIGLGIMGLAELLIKLKIAYDSKDAVL 697 Query: 539 LTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYD 598 + K + I + S EL E+G+ P F + ++ Sbjct: 698 MAEKLMQFITNEARQCSTELGLEKGSFPNFELSVWST----------------------- 734 Query: 599 WEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS----------- 647 +RN+T++ + P+ T I N ++GIEP ++ Sbjct: 735 ---------YDAMRNATVTTIAPTGTIGIIGNCSSGIEPLFAVAFVRNVMGGMLEINKLF 785 Query: 648 -------------------KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKF 688 K G ++ + E + + ++ + ++++ Q++ Sbjct: 786 EEIAKEKGFYSKELIAEIAKRGSIQDIAGIPEDIKRVFVTALDIS-PEWHVRMQAAFQRY 844 Query: 689 IDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAED------ 740 D ++S N + + L AYK K T+Y ++G Sbjct: 845 TDNAVSKTVNLP------SDATRGDVKRVFLLAYKLKCKGVTVYRYGCKEGILSLEVPKL 898 Query: 741 --AQDDLVPSIQDDGCESGAC 759 + S C + Sbjct: 899 MLEEYVCADSEYTGECRICSV 919 >UniRef50_A4WLF4 Ribonucleoside-diphosphate reductase n=2 Tax=Thermoproteaceae RepID=A4WLF4_PYRAR Length = 1240 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 78/464 (16%), Positives = 156/464 (33%), Gaps = 51/464 (10%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIK 64 + V K DG E +++K+ + A + + V L + + + ++ + + Sbjct: 1 MSVNKLDGRVEPFSMEKLKISIAKAGADVGVDTNVDVSLEVKKEV---VWSWELADMVQL 57 Query: 65 AAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPAL-------YDHVVKMVEMGKYDN 117 + D P+ +A + + K+A+G+ +V+ G Sbjct: 58 ELLKR-AIDRPELALVAQSHLLGRVYKEAFGKDFLKTKVGYGERAAARFKSLVDAGLLKR 116 Query: 118 HLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEG-KYLVQNRVTGEIYESAQFLYILV 176 LE ++ E + D + SY A++ Y ++++ + E+ V Sbjct: 117 EALEFLSKFE-------PRPEFDRSLSYNALRLFTNGNYALRDQ-NFRLAETPSMAAWRV 168 Query: 177 AACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDS 236 A + L+ + +YD ++ KI +P T F+SC +E D L S Sbjct: 169 ATAVARE------LERARLYYDYITKLKIVPASPFWFNAWTKKEMFASCFTLEVEDCLSS 222 Query: 237 I--------NATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTA 288 I + G+G + +R G +RG +G I F + F T Sbjct: 223 ITHPGRYCIYDALAYSGIIQQLGGGVGYDFSLLRPEGDVVRGSVGVASGPISFMRLFDTN 282 Query: 289 VKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTR-- 346 V QGG R GA +WH ++ + K + + +++ + V + + Sbjct: 283 VDVIKQGGKRRGAQMGTLHVWHPDIRKFIKAKTGELKDAH-LQNFNISVFADDTFMEKAL 341 Query: 347 -LLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQE 405 + + L +P + + + E + A ELF + Sbjct: 342 GIDQNPKYKLINPRAFVEKTGTKPVEYVDEREVAIPEEA----VWGEINAKELFKEIAHG 397 Query: 406 RASTGRIYIQNVDHCNTHSPFD---------PAIAPVRQSNLCL 440 +G + + N +P R N C+ Sbjct: 398 AWDSGDPGMIFKSNLNASNPLLGVEIEVAGYKFRYVWRSVNPCV 441 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 68/370 (18%), Positives = 122/370 (32%), Gaps = 91/370 (24%) Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN----------------NLDELEELA 482 C E +C L+ NL + D L + A Sbjct: 832 CAETVQNP------------FEVCNLTHINLVKFVKDNCGGGSFEEKLGCIDWDGLAQAA 879 Query: 483 ILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHK 542 + R LD +D I R G+G++ FA L K G Y+ A L ++ Sbjct: 880 RVGTRFLDDAIDRSKTGIEVIDEMNAATRKNGLGIMGFAELLIKLGVPYASWEAVELINR 939 Query: 543 TFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEAL 602 I L S ELA+E+G +F+++ YA+G +P+ ++ + + L Sbjct: 940 IMGWIYVNALDESAELAREKGPFKFFHKSIYARGEIPVLKFQDHVWSRWERIKRVYPREL 999 Query: 603 RESIKTH------------------------GLRNSTLSALMPSETSSQISNATNGIEPP 638 +E+ G+RNS + ++ P+ +S ++ T+G+EP Sbjct: 1000 QEAGDKLRDITMRTRQWLGPYLDKLSEKVRGGVRNSVVLSIAPTGRTSILAGTTSGVEPV 1059 Query: 639 RGYVSIKASKDGILRQV------------------------------VPDYEHLHDAYEL 668 ++ G L + P E + Sbjct: 1060 FALAFLRNVTVGTLVEYYEPGIELLKSRGLWTPQVRKVVEETGMLRDAPVPEDVKHLLAT 1119 Query: 669 LWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK- 727 E+ ++ + Q+++DQ IS N P + + A+ GVK Sbjct: 1120 AMEIGWL-WHVLMQASAQQWVDQGISKTINMP------ANAPEEDVYWAFAFAWAVGVKG 1172 Query: 728 -TLYYQNTRD 736 T+Y ++ Sbjct: 1173 ITVYRDKSKS 1182 >UniRef50_B2UNR7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Verrucomicrobiales RepID=B2UNR7_AKKM8 Length = 1180 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 103/619 (16%), Positives = 188/619 (30%), Gaps = 110/619 (17%) Query: 90 RKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTE-EEFKQMDTFIDHDRDMTFSYAAV 148 RK G + + H + + K + + + + AV Sbjct: 23 RKDLLGGLKFTRRFSHNEVHPYDEVDWTRRDVRIMDWKTGKTIYERLGLEAPAHWDDNAV 82 Query: 149 KQLEGKYLVQNRVTGEIYE-SAQFLYILVAAC--LFSNYPR-----ETRLQYVKRFYDAV 200 K KYL + YE S + +Y ++ ++ E + + + Sbjct: 83 KITADKYLFGSEPGSLEYEDSFRNIYDRISNTYTVWGWEEGYFATLEDAEIFNEEIKAML 142 Query: 201 STFKISLPTPIMSGVRT-----------------------------------------PT 219 + +P+ + Sbjct: 143 VQQIWAPNSPVWFNIGHWEQWRWGRPDLRENYTGHGNKAYHTKGTKNNLKTFMVQSTYEY 202 Query: 220 RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCI 279 Q S+C L E GDS++ I + + + +G+GIN +R+ PI G + +G I Sbjct: 203 PQCSACFLTEVGDSMEDILDHLTTEGRIFASGSGVGINLSTLRSSKEPISG-KGRSSGPI 261 Query: 280 PFYKHFQTAVKSCSQGGV-RGGAATLFYPMWHLEVESLLVLKNNRGVEGNR-VRHMDYGV 337 F + + + GG R A + H ++ + KN + +R + V Sbjct: 262 SFDRGWDRMAGAIKSGGKTRRAARMVLMFSDHPDIFEFINTKNRQEDIAKVILREHNVHV 321 Query: 338 QINKLM--------------------------------YTRLLKGEDITLFSPSDVPGLY 365 ++ ++ LL GE ++ + + L Sbjct: 322 ELKQIAETKLVAGTPAEKAAARVILSLPLATRNSFDPHMDALLYGETLSHQNANHSVSLK 381 Query: 366 DAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP 425 F+ YT++ + + +Q +A EL M Q G + N D N +P Sbjct: 382 GDFWQALANNGNTYTRWVTNPAHIEQTFRAQELLEAMAQSIWDNGEPGVHNNDVINLWNP 441 Query: 426 FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNL 475 +I + SN C E C LS+FN + Sbjct: 442 VK-SIGTITTSNPCSEYVF------------LNNTSCNLSSFNAYRFLIKGEDGKPVFDA 488 Query: 476 DELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGS 535 D L A LA+ D ++ +PI G RT GIG N L G Y Sbjct: 489 DALTHAARLAMVCADLNVERGGFPIEEIAEGTYKYRTTGIGFANVGGSLMALGVPYDSDE 548 Query: 536 ANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPL 595 + + A+ AS E+ E G+ + + K +L + +A+ Sbjct: 549 GRWIASQLCSALTAACWTASAEMGAELGSYVEYPASK--KDLLAVLRLHNAAQKLASALP 606 Query: 596 HYDWEALRESIKTHGLRNS 614 + + + + N+ Sbjct: 607 SQKDSKTLDDLIENIIANA 625 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 8/76 (10%) Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLY 730 G++ ++G +Q FI + S N S +Q + L+ +++ GVK ++ Sbjct: 863 ISPAGHVLMLGALQPFISGACSKTVNMPVS------ASVQDIYDSLIMSHELGVKCIAIF 916 Query: 731 YQNTRDGAEDAQDDLV 746 ++ A D Sbjct: 917 RAGSKANAVYVVDTPE 932 >UniRef50_A7IYE5 Putivate ribonucleotide reductase n=5 Tax=root RepID=A7IYE5_9CAUD Length = 865 Score = 307 bits (787), Expect = 8e-82, Method: Composition-based stats. Identities = 76/358 (21%), Positives = 145/358 (40%), Gaps = 11/358 (3%) Query: 84 LAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTF 143 + H+ K DH+ + V+ +D ++ Y E+ K++ + Sbjct: 34 YFLEHVNKNTVFFHSLEEKVDHLTEEVQ--LWDKDVVLRYGFEDLKRLMKQAYGHKFRFK 91 Query: 144 SYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTF 203 +Y + Y ++ YE + +L A ++ + D + Sbjct: 92 TYMGALKFYNSYALKTNDGKRYYERYEDRVVLTAIHYS------EDFEHAESLVDLIIKG 145 Query: 204 KISLPTPIMSGVRT-PTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR 262 TP + SC +++ D++ SI ++ + G+GI +R Sbjct: 146 IFQPATPTFLNAGLLDAGKPVSCFILDVQDTMGSIGRIVQDSLQLSKRGGGVGIGFSNLR 205 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 G+PI+G E +G IP K + + +Q G R GA ++ H ++ + L K Sbjct: 206 EAGAPIKGREGQASGVIPVMKILEDSFSYSNQLGARQGAGAVYLNAHHPDILAFLDTKRE 265 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 E R++ + GV + + + + E + LFSP D+ +Y ++ E +Y + Sbjct: 266 NADEKIRIKTLSLGVIVPDVTFRLAKESEPMALFSPYDINKVYGKSLSEFSVTE-MYDTW 324 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 KDD I K + A +LF + + + +G Y+ D N +P P I ++ SNLC+ Sbjct: 325 LKDDRIAKTFIDARKLFQTIAEVQFESGYPYLMFDDAANRGNP-APNIGRIKSSNLCV 381 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 77/427 (18%), Positives = 156/427 (36%), Gaps = 38/427 (8%) Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR 411 + F L A+ E +RL + + S + + G Sbjct: 456 EWHKFYVDRDGELVKIPLAELEVGDRLLAQGSESPSRSENHYVPSHKSHATVHSIEFYGV 515 Query: 412 IYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND----ENGEIALCTLSAF 467 + + N HS + C EI P+ P D + G C L + Sbjct: 516 EDVYDPTVENGHSVIYNGLVTGN----CSEIFQPSSPSEFSEDSFFTKTGRDISCNLGSL 571 Query: 468 NLGAI--NNLDELEELAILAVRALDAL-LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYL 524 N+ + + D+ A + L+ + + + P RG R +G+G +N L Sbjct: 572 NVARLSALDTDDFHTAVKDAYKFLNQVAVQTEIGSSPTVVRGNRESRAIGLGQMNLHGAL 631 Query: 525 AKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA-CPWFNETTY--------AK 575 + G Y+ A + + + ++ AS + A+E G+ + + + Sbjct: 632 IELGLDYNSQEARDWFEWYMMRVTFSVISASVDKAEEMGSGFKGAEGSRWGDIISGHRDR 691 Query: 576 GILPIDTYKKDLDTIANEPLHY--DWEALRESIKTHGLRNSTLSALMPSETSSQISNATN 633 + ID + + N + + +W L E + HG+ N L A+ P+ + S I++AT Sbjct: 692 AMALIDRITASGNAMENSDVAWSYEWLRLLERFRLHGIYNQNLQAIPPTGSISYINHATA 751 Query: 634 GIEPPRGYVSIKA-SKDGILRQVVPDY-EHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQ 691 I P V ++ K G + ++ + + + G + + + + ++DQ Sbjct: 752 SIHPVTSPVEVRKEGKLGRVYYPQYGVTNENVESIDSAYAI-GPNPIIDMYAVASPWVDQ 810 Query: 692 SISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQD 751 +S + + + + + + A+K G+K+LYY T + + + Sbjct: 811 GMSLTLFFPDT------ATTRDINRAQIYAHKKGLKSLYYIRTSAKSVEGT-------EV 857 Query: 752 DGCESGA 758 +GC S A Sbjct: 858 EGCLSCA 864 >UniRef50_Q18GD3 Ribonucleoside-diphosphate reductase n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18GD3_HALWD Length = 1909 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 80/503 (15%), Positives = 155/503 (30%), Gaps = 115/503 (22%) Query: 222 FSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF 281 ++ I D+ + + + + G+G ++R G + +G I F Sbjct: 586 PATVYDITVADN----HEYVTDGIISHNSGGGMGYAFWKLRPYGDSVGSTGGIASGPITF 641 Query: 282 YKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG----------------- 324 + + ++ +QGG R GA + H +V + KN Sbjct: 642 MRTYDQMCETIAQGGARRGAQMGVMRISHPDVIQFIHAKNKDVSLAHSLRLNDPDDFTHT 701 Query: 325 -------------VEGNR------------VRHMDYGVQINKLMYTRLLKGEDITLFSPS 359 E R + + + V + L E+ T +P Sbjct: 702 SFADALEEARELIDEEGRVPEHLRNAVEGHLSNFNISVGVTDEFMEALFADEEFTFTNPR 761 Query: 360 DVPGLYDAFFADQEEFERLYTKYEKDDSIRKQR---VKAVELFSLMMQERASTGRIYIQN 416 + E + LY ++ + + V A EL+ ++ G + Sbjct: 762 T-----EDPHIATPETKELYELHDLGEHVEVGEELSVPAEELWDHIVSGAHENGEPGVIY 816 Query: 417 VDHCNTHSPF---DPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLG--- 470 ++ N F + + +N C E L E C L NL Sbjct: 817 LERVNKEHSFDVEKHSEHEILATNPCGEQPL------------EEYEACNLGHINLSTLA 864 Query: 471 --------------------------AIN----NLDELEELAILAVRALDALLDYQDYPI 500 A +++ R L+ ++ D+P+ Sbjct: 865 DKDAPDWRVWYDNNGDAYNNLDDAAEAFIYEAIDMNAFNRRIESGTRFLENVVTMSDFPV 924 Query: 501 PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAK 560 + R +G+G++ A + G RY AN + + I + AS+ELAK Sbjct: 925 DEIEATVRDMRKIGLGIMGLAQLYIQIGVRYGSQEANAIAEQLMTHINHESKWASHELAK 984 Query: 561 EQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALM 620 E+G + E+ YA + ++ A+E WE +RN + + Sbjct: 985 ERGTFNDWTESKYANPTEYREWFEHHTGLDASE-----WED------GFLIRNHNTTTIA 1033 Query: 621 PSE--TSSQISNATNGIEPPRGY 641 P+ + + + G+ P + Sbjct: 1034 PTGCVEENSLVSTDEGLRPIKDL 1056 Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 60/208 (28%), Gaps = 19/208 (9%) Query: 52 GIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQ--FEPPALYDHVVKM 109 + ++ I + + I + D Y L +LRK A G +++ V + Sbjct: 5 DVDADELELPIKRTTGETIEQRLTDNAY-HNILPARYLRKDAKGDLAESQEEIFERVAQN 63 Query: 110 VEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYA-------AVKQLEGKYLVQNRVT 162 V + + + TE DH R + A + V N Sbjct: 64 VALAEAVFEADKQDTEITVTPDQLKPDHPRRDELAEEVFGAGADAADTVTTTLSVYNVNK 123 Query: 163 GEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQF 222 L V + S F D +S +P + +Q Sbjct: 124 FAYETIVPELPDEVQHHVKSV---------ADEFEDLMSRLSFMPNSPTLMNAGDELQQL 174 Query: 223 SSCVLIECGDSLDSINATSSAIVKYVSQ 250 S+C + D + I+ T+ + Sbjct: 175 SACFVDSPSDDISDIHQTAKEAAEVFQC 202 Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 47/174 (27%), Gaps = 51/174 (29%) Query: 624 TSSQISNATNGIEPPRGYVSIKASK----------------------------------- 648 T+S I N T G EP K Sbjct: 1475 TTSMIGNTTGGCEPIYNVAYYKNVSDDVQGDEMLVEFDDYFLRVLEQNDIDVEAVKQEAQ 1534 Query: 649 -------DGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDP 701 + + + + + + + ++ G D + + Q+ ID +IS N+ Sbjct: 1535 EQMANNDFDGVDGLDTVPKAIGELFVVTSDLSGKD-HAGVQCACQEGIDSAISKTCNFPS 1593 Query: 702 SRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDG 753 S + + + Y+ G K T+Y TR D+ Sbjct: 1594 S------ATKEDMDEVYRYIYQNGGKGVTVYRDGTRSKQVLTTRAQNTEFADES 1641 >UniRef50_B8G0R6 Ribonucleoside-diphosphate reductase n=5 Tax=Bacteria RepID=B8G0R6_DESHD Length = 1153 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 109/304 (35%), Gaps = 38/304 (12%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP-----RETRLQYVKRF 196 + A LE +YL Q GE+ ES + + VA+ + ++ + K F Sbjct: 15 NLTPNARVILEKRYLKQE--NGEVAESPEDMLYRVASIIAQVEETFGKTKKEVKELAKSF 72 Query: 197 YDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGI 256 Y+ ++ + +P + Q S+C ++ DS++ I + G G Sbjct: 73 YEMMAKLEFMPNSPTLMNAGRDLGQLSACFVLPVEDSMEEIFDAIKSAAIIHKSGGGTGF 132 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 + R+R S +R +G + F K F A ++ QGG R GA + H ++ Sbjct: 133 SFSRLRPKNSTVRSTGGVASGPVSFMKVFNAATEAVKQGGTRRGANMGILRVDHPDIREF 192 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFE 376 + K + + + + V I + + + L P Sbjct: 193 ITCKEDNKE----ITNFNISVGITEEFMKAVQEKRHYNLIDPHT---------------- 232 Query: 377 RLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS 436 E D + A E+F L++ G I +D N +P P + + + Sbjct: 233 -----KEADGQLY-----APEVFQLIVDHAWRNGEPGIIFLDRLNRDNP-TPQLGEIEAT 281 Query: 437 NLCL 440 N C+ Sbjct: 282 NPCV 285 Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats. Identities = 69/362 (19%), Positives = 121/362 (33%), Gaps = 97/362 (26%) Query: 424 SPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN---------N 474 + FD V C E L C L + NL + + Sbjct: 638 NAFDANGIYVHN---CGEQPLLPNE------------ACNLGSINLKLMVTEKNGKVVVD 682 Query: 475 LDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDG 534 + L ++ LA R LD +++ YP+P+ + G R +G+GV+ FA L Y+ Sbjct: 683 WERLGQITRLATRFLDNVIEANTYPLPSIEEMVKGNRKIGLGVMGFADMLILLQTSYASE 742 Query: 535 SANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEP 594 A K IQ S LA+E+G P + + Y G+ P Sbjct: 743 DAVEYAEKVMNFIQTEARLESQRLAEERGTFPNYQGSIY-DGVRP--------------- 786 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD----- 649 LRN+TL+ + P+ T S I A++G+EP K D Sbjct: 787 ----------------LRNATLTTIAPTGTISMICGASSGVEPLFAVAYTKTVMDGTPLI 830 Query: 650 ---------------------------GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLV 682 G + + + + E+ + ++++ Sbjct: 831 EVNPIFQSLAEDYGFNSPELMRKIAEKGTVLGFPEVPNWVQEVFVTAQEI-EPEWHIRIQ 889 Query: 683 GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAED 740 QK+ D ++S N+ + + + K A++ K T+Y +R+ Sbjct: 890 AAFQKYTDNAVSKTINFA------NEATHEDIAKAYELAHELNCKGLTVYRDGSREEQVL 943 Query: 741 AQ 742 + Sbjct: 944 ST 945 >UniRef50_C9RBG7 Ribonucleoside-diphosphate reductase n=1 Tax=Ammonifex degensii KC4 RepID=C9RBG7_AMMDK Length = 955 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 117/316 (37%), Gaps = 39/316 (12%) Query: 130 QMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS-----NY 184 ++ + + + + LEG+YL ++ + E+ + ++ VA + Sbjct: 7 ELFSQGRGESLLKLDANSRIILEGRYLKRDEAGN-VVETPEEMFWRVARAVAEAEARFGA 65 Query: 185 PRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAI 244 + ++ +RF++ +++ +P + Q ++C ++ DS++SI T Sbjct: 66 SAQEVEEWARRFFELMASLDFLPNSPTLINAGRELGQLAACFVLPIEDSIESIFETLKYA 125 Query: 245 VKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATL 304 G G + R+R G P+R +G + F + F A + QGGVR GA Sbjct: 126 ALIHKSGGGTGFDFSRLRPKGDPVRSTGGVASGPVSFMRIFNAATEEIKQGGVRRGANMG 185 Query: 305 FYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGL 364 H ++ + K G R+ + V + + L + + L Sbjct: 186 ILRADHPDIMEFVACKEEEG----AFRNFNISVAVTDAFFETLARSGEWELVFR------ 235 Query: 365 YDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS 424 +R+ A ELF ++Q + G + +D N + Sbjct: 236 ----------------------GKVYRRLPARELFDWIVQHAHANGEPGLLFLDAINRAN 273 Query: 425 PFDPAIAPVRQSNLCL 440 P PA+ + +N C+ Sbjct: 274 P-TPALGRIEATNPCV 288 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 77/416 (18%), Positives = 137/416 (32%), Gaps = 109/416 (26%) Query: 390 KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPL 449 +R + F + G + F V C E L Sbjct: 604 FRRGPYRKPFVARFEALIPDGEE-MVYDLTVPAVHAFVANGLVVHN---CGEQPLLP--- 656 Query: 450 NDVNDENGEIALCTLSAFNLGAINN-----LDELEELAILAVRALDALLDYQDYPIPAAK 504 C L + NL + + ++L E+ LAVR LD +++ ++P+PA Sbjct: 657 ---------YESCNLGSINLLNMVDGAGFSWEKLREVVHLAVRFLDDVIEVNNFPVPAIA 707 Query: 505 RGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA 564 R +G+GV+ +A L K G Y +A L + I+ AS +LA+E+G Sbjct: 708 AATRRTRKVGLGVMGWADALFKLGIPYDSEAALGLGAEVMRFIREEARAASRQLAEERGT 767 Query: 565 CPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET 624 P + ++ Y + P LRN+TL+ + P+ + Sbjct: 768 FPAWEDSVY----------------YPHLP----------------LRNATLTTIAPTGS 795 Query: 625 SSQISNATNGIEPPRGYVSIKASKDGILRQVV---------------------------- 656 S I+ + GIEP + DG VV Sbjct: 796 ISAIAGVSPGIEPVFALAYTRMVLDGKKLLVVDKVFQEYVEQNFPPSRREEIMAGVSRTG 855 Query: 657 ---------PDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSG 707 E + ++ E+ + +L+ Q++ D ++S N Sbjct: 856 NLGLCAEELDLPEDMRRLFKTALEIA-PEWHLRHQATFQQYTDNAVSKTINLP------S 908 Query: 708 KVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI 761 +++ + A++ VK T+Y +R Q L+P C++ Sbjct: 909 DSSPEEVGQIFWKAFELKVKGLTVYRTGSR----REQPLLLP------TTCRPCRL 954 >UniRef50_Q19CR5 Ribonucleotide reductase A subunit n=3 Tax=unclassified T4-like viruses RepID=Q19CR5_9CAUD Length = 570 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 122/663 (18%), Positives = 215/663 (32%), Gaps = 169/663 (25%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVST 202 F+ Y + E+ + + VA+ L + R + +R++D + + Sbjct: 27 FTTQGYSMFLKNYQYKG-------ETVRGAFRRVASTLA---KHDIRPEAEERYFDLLWS 76 Query: 203 FKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR 262 K+++ TP+ T SC GDS+ + + G G IR Sbjct: 77 GKLAMATPVFCNTGTDRGMPVSCAGSYVGDSVLDFYEGQTEVAMLAKNGFGTASYLGDIR 136 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 GS I G +P + +F + G R G + H + Sbjct: 137 PRGSDISTSHNKADGLVPVFDNFVNTKTKVAAAG-RRGEWAGYVDFSHGD---------- 185 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERL-YTK 381 + + L +P+ FE+ Y K Sbjct: 186 --------------------FWEL----QGYVLKNPASAH--------VGWVFEKEDYEK 213 Query: 382 YEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPF--DPAIAPVRQSNLC 439 D R ++ ++ RA TG+ Y+ N +P + +R S LC Sbjct: 214 LLARDPEYMAR------WNELLYMRARTGKGYMWKNWIANDLAPQAIKNSGIRIRSSQLC 267 Query: 440 LEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDEL-EELAILAVRALDALLD---- 494 EIALP+ ++ C LS+ NL DE+ E AVR LD++ Sbjct: 268 TEIALPSDDMH--------TFTCILSSLNLAR---WDEISAEDIKWAVRFLDSVCSEFLE 316 Query: 495 ----YQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYY 550 + A R R LG+G + F YL + + G+A+ L + + I+ Y Sbjct: 317 KAKKLPYDTLHKAIRFTEKARALGLGTLGFHTYLQMNDTAFESGAAHILNNSIYSQIKVY 376 Query: 551 LLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHG 610 AS ELA+E G W T G Sbjct: 377 AEAASRELAEEHGEPEWCVGT--------------------------------------G 398 Query: 611 LRNSTLSALMPSETSSQIS-NATNGIEPPRGYVSIKASK--------------------- 648 +RN+TL + P+ +S+ ++ + G+EP I+ S Sbjct: 399 MRNATLITIAPNMSSALLAGGVSQGVEPLVCNSFIQQSNAGDFVRSNPVLAKVLSDRLSD 458 Query: 649 --------------DGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSIS 694 +G ++ + +H ++ +E+ ++L Q+ IDQ+ S Sbjct: 459 KEIKDLMENIATYHNGSVQHLDILTDHEKMVFKTAYEID-QHAIIRLASARQRHIDQAQS 517 Query: 695 ANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGC 754 N + S + + D +K+LYY + G + + ++ C Sbjct: 518 INLFFAADEKESVVASVHKAFMD-----DPRLKSLYYLRSERGVKASTGEV-------EC 565 Query: 755 ESG 757 + Sbjct: 566 LAC 568 >UniRef50_C4XRN9 Ribonucleoside-diphosphate reductase n=2 Tax=Desulfovibrio RepID=C4XRN9_DESMR Length = 1096 Score = 300 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 112/296 (37%), Gaps = 37/296 (12%) Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQY-----VKRFYDAVSTFK 204 L +YL ++ E Q L+ VA + S + + ++FYD + + Sbjct: 3 VLSKRYLKKSPEGA-PEEDVQGLFWRVAGAIASEEAKYAASPWQPEALARKFYDLMVGMR 61 Query: 205 ISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRAL 264 +P + TP Q ++C ++ GDS+D I G G + R+R Sbjct: 62 FLPNSPTLMNAGTPLGQLAACFVLPVGDSMDEIFDAVKFAALIHKSGGGTGFSFSRLRPK 121 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 S + +G + F + F TA + QGG R GA + H ++ + K G Sbjct: 122 KSRVGSTGGVASGPVSFMRIFNTATEQVKQGGTRRGANMGILRIDHPDILEFIACKEREG 181 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK 384 + + + V + + + KGED L P D Sbjct: 182 E----LTNFNISVALTERFMQAVEKGEDYDLIDPRDGSK--------------------- 216 Query: 385 DDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 + + A E+F+L++++ +G I +D N +P PA+ + +N C+ Sbjct: 217 -----RGSLSAPEVFALLVRKAWESGDPGIVFLDRINRDNP-TPALGAIESTNPCV 266 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 72/351 (20%), Positives = 113/351 (32%), Gaps = 91/351 (25%) Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN--------LDELEELAILAVRALD 490 C E L C L + NL + L E LAVR LD Sbjct: 637 CGEQPLLP------------YEACNLGSINLSVFYDPSAPDGIDWAGLAETVHLAVRFLD 684 Query: 491 ALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYY 550 ++D YP+ R +G+GV+ FA L Y A L K E +Q Sbjct: 685 NVIDASRYPLDQITEMVRANRKIGLGVMGFADLLYLLRIPYDSTEALTLAEKLMETVQAE 744 Query: 551 LLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHG 610 AS LA E+GA P + E+ Y K L Sbjct: 745 ARSASKTLAAERGAFPAYPESIYGKRNL------------------------------GP 774 Query: 611 LRNSTLSALMPSETSSQISNATNGIEPPRGYVSIK------------------------- 645 RN+T + + P+ T S I+ ++GIEP + Sbjct: 775 YRNATTTTIAPTGTLSIIAGCSSGIEPLFALSFARHVMDGEKLVEANPHFVTALREAGAH 834 Query: 646 -------ASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTN 698 ++ G + + E L + + ++ +L++ QK+ D ++S N Sbjct: 835 SDALMEEVTRKGSIAHIGLLPEALREVFVTAMDI-EPVWHLKMQAAFQKYTDNAVSKTVN 893 Query: 699 YDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVP 747 S +++ + AY+ G K T+Y + D P Sbjct: 894 LPNS------ATKEEIREIYWLAYELGCKGVTVYRDGCKSNQVLCTGDGAP 938 >UniRef50_O26748 Ribonucleoside-diphosphate reductase n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26748_METTH Length = 703 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 120/321 (37%), Gaps = 41/321 (12%) Query: 142 TFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQY--VKRFYDA 199 + S A+K LE +YL++ GE+ E+ + ++ VA + S + FY Sbjct: 3 SLSTTALKVLEERYLLRGE-GGEVVETPEEMFRRVARAVASADEAYGDDPAVAEEAFYSV 61 Query: 200 VSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAG 259 + + +P + TP Q S+C ++ DS+DSI ++ + G+G + Sbjct: 62 MGNLEFLPNSPTLMNAGTPINQLSACFVLPVEDSIDSIFSSLRDMAIIHKSGGGVGFSFS 121 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 R+R G + +G + F + F AV QGG R GA + H ++ S + Sbjct: 122 RLRPRGDIVASTMGVASGPVSFMRIFDVAVDVIKQGGRRRGANMGVLHVSHPDIFSFIDA 181 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 K+ G +R+ + V + + L +P + Sbjct: 182 KSREGP----LRNFNLSVAVPDEFM----DDRPVDLINPRN------------------- 214 Query: 380 TKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLC 439 V++ + +++ +G I D N ++P P + + +N C Sbjct: 215 -------GEVVDSVESRVILKRIVEAAWRSGDPGILFEDRINRYNP-TPQLGRIEATNPC 266 Query: 440 LE---IALPTKPLNDVNDENG 457 + I + + V + G Sbjct: 267 VSGDTIVMTSGGPRTVAELEG 287 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 66/351 (18%), Positives = 120/351 (34%), Gaps = 84/351 (23%) Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN-----NLDELEELAILAVRALDALL 493 C E L T C L + NL + N ++L +AV LD ++ Sbjct: 400 CGEQPLLT------------HESCNLGSVNLSLMVGPSGINWEKLRRTIHVAVHFLDNVI 447 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 D YP+ + + R +G+GV+ FA L K G Y+ +A + + I + Sbjct: 448 DVNSYPLRPVEEMTLRTRKIGLGVMGFADMLIKLGIPYNSVAALEVAGRVMSFISSEARR 507 Query: 554 ASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRN 613 AS ELA+E+G+ P F + + +RN Sbjct: 508 ASMELARERGSFPEFKGSIWDIQGFEC------------------------------MRN 537 Query: 614 STLSALMPSETSSQISNATNGIEPPRGYVSIKAS-------------------------- 647 +TL+ + P+ + S I+ ++GIEP + Sbjct: 538 ATLTTIAPTGSLSIIAGTSSGIEPLFAVSFTRNILGRSFHELHPLFKTMAGRLDKRSLEA 597 Query: 648 --KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFP 705 G LR V + + E+ ++++ Q+++D ++S N Sbjct: 598 IESRGSLRGVPGVPARIRRLFVTAHEID-PVFHVKMQAAFQRYVDNAVSKTVNLP----- 651 Query: 706 SGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQDDGC 754 + + A++ G K T+Y ++ + S +D C Sbjct: 652 -ADSSPADVERVFRAAHELGCKGVTVYRYGSKVDEVLRFPEYAGSCRDMTC 701 >UniRef50_UPI0001923DF2 PREDICTED: hypothetical protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI0001923DF2 Length = 472 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 81/350 (23%), Positives = 134/350 (38%), Gaps = 29/350 (8%) Query: 39 SQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFE 98 + + IQ I + I + + A+ I + P Y + A+L ++ K Sbjct: 151 NNIVQEHDIQI--DITNTFILNFLKEFIAE-IKEEFPKYLLITAKLLQENIDKN--NDMS 205 Query: 99 PPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQ 158 P + ++ +++ I +DRD F Y +K LE YL + Sbjct: 206 P--------------ILSDETFNIISKYH-RRLQNSIRYDRDYLFDYFGIKTLERSYLYK 250 Query: 159 NRVTG-EIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRT 217 T +I E Q + + VA + + V YD +S + TP + T Sbjct: 251 LHFTKFKIIERPQHMIMRVAIGIHG-----EDIDSVIETYDLISQKYFTHATPTLFNAGT 305 Query: 218 PTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTG 277 Q SSC L D+++SI I GIG++ +R GS IRG +G Sbjct: 306 RRAQMSSCFLQAIDDNIESIFEAVRDIAFTSKWAGGIGVHMSALRCRGSLIRGTNGIASG 365 Query: 278 CIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGV 337 +P K +QGG R G+ + H ++ L+ N G + +R R + + Sbjct: 366 VVPLCILLNKLAKYINQGGRRNGSIACYLEPHHADIFDFCDLRKNTGNDDDRARDLYLAL 425 Query: 338 QINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS 387 + L R+ +L P PGL EE+ +LY YE + + Sbjct: 426 WVPSLFMKRVRDDLTWSLMCPDQCPGLNKV---HSEEYVKLYEMYESEGN 472 >UniRef50_B2KX75 Ribonucleoside-diphosphate reductase n=2 Tax=Spodoptera frugiperda MNPV RepID=B2KX75_NPVSF Length = 850 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 122/772 (15%), Positives = 256/772 (33%), Gaps = 143/772 (18%) Query: 17 INLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGI--------KTSDIHETIIKA-AA 67 + I + E + ++ S + D +T ++ + I K Sbjct: 122 FTPNVITEDNNEDTEDENEDVPEKIVEDSDDEDNDYFYNQYKKLHETMELQKKIKKNLCE 181 Query: 68 DLISRDAPDYQY-----LAARLAIFH--------------LRKKAYGQFEPPALYDHVVK 108 D + D P+Y R+ + + + + F+ + Sbjct: 182 DRMRLDKPEYYLSTDYTNVCRVTVEDTSNFDKEVVQIVTEMHEDIHESFQVVMKNLYHKN 241 Query: 109 MVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYES 168 + Y ++ ++++ + HDRD T+ Y + E Sbjct: 242 EIGQRLYCLAMVY------GEELNKVLRHDRDYTYD-------LRLY----ENKNNLLER 284 Query: 169 AQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLI 228 Q +++ VA ++ +Q V Y +S + + T + Q ++ + Sbjct: 285 VQHMFMRVALTMYG-----DDIQKVIESYHMMSLRMYAHSDLAFACAGTNSTQLANDYKL 339 Query: 229 ECGDSLDSIN---ATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHF 285 + D+I ++ + + + + F Sbjct: 340 YVDNCSDNIFLSYKIIQECATIMNCGGAVDLYMQNV----------------SVKMLPVF 383 Query: 286 QTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYT 345 V+ T+ +WH EV++ + N + N ++ + V I + Sbjct: 384 NNMVRHILHKNKIVKLPTIHIELWHHEVKNFIETIRNNSDKVNFLQ---FTVDIPDIFMN 440 Query: 346 RLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQE 405 R+ TL P L + ++FE+ Y K+EK + I + VKA +L L++ Sbjct: 441 RVKNNGYWTLLDPESCTSLSSKY---GDKFEQAYVKFEK-EHINAKIVKAKDLLKLIIDT 496 Query: 406 RASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLS 465 G + + D N + + N+ ++ Sbjct: 497 MRINGNLSVMFKDTFNNNFSIEDEQVK---YNIVFSASVAVDKC---------------- 537 Query: 466 AFNLG-AINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYL 524 NL + + L + VR LDA+++ YP+ + + + +G+ FA L Sbjct: 538 -VNLETKQFDYNLLRRITKNVVRDLDAMININMYPLDKFEN---KKHNIAVGMQGFAETL 593 Query: 525 AKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYK 584 G + A L E I Y ++ASNELA+ A NE+ K + Sbjct: 594 LLLGYTFDMVEAKALNKLIAETIYYGAIEASNELAE---ASKELNESGKKKSHRNEKITQ 650 Query: 585 KDLDTIA-NEPLHYDWEALRESIKTHGLRNSTLSA--------LMPSETSSQISNA---- 631 + + NE L +DW++L E ++ +G+++ T + ++ ++T+S N+ Sbjct: 651 QIYNVYTDNETLMWDWQSLHEKVERYGVKHVTFVSNTYKTAFEILGTKTTSGPFNSFLYQ 710 Query: 632 ----------------TNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGN 675 + P SI A+K+G ++ +H+ ++L E Sbjct: 711 IEKINYIEEVLVRALAHENLNTPTVINSILATKNGSVQNNDLIPDHIKKVFKLNTETDCK 770 Query: 676 DGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK 727 L + +IDQ+ + + ++L A++ +K Sbjct: 771 Q--LDYMIENSPYIDQTQELILH---------DTNYDNIYCNILKAWQNKLK 811 >UniRef50_O31875 Bsu nrdEB intein n=33 Tax=root RepID=NRDEB_BACSU Length = 1084 Score = 295 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 139/355 (39%), Gaps = 10/355 (2%) Query: 100 PALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQN 159 L + + +++ Y+ L YT E+ K + + S+ + + Y ++ Sbjct: 48 HDLKEKLDYLIKNDYYEEEFLSKYTFEQIKSIYKIAYSYKFRFPSFMSAFKFYNDYALKT 107 Query: 160 RVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRT-P 218 +I E + +VA + + + + TP Sbjct: 108 NDKTKILERYEDRVSIVALYCADGDYEKAVEE-----VHTMMKQEYQPATPTFLNAGRKR 162 Query: 219 TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 + SC L+E GDSL+ I+ ++ G+ +N ++RA G I+ E G Sbjct: 163 RGEMVSCFLLEVGDSLNDISRAIDISMQLSKLGGGVALNLNKLRAKGEAIKDVENATKGV 222 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQ 338 + K A + Q G R G+ ++ ++H ++ L K E RV+ + GV Sbjct: 223 VGVMKLLDNAFRYADQMGQRQGSGAVYLSVFHPDITDFLDTKKISADEDVRVKTLSIGVV 282 Query: 339 INKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVEL 398 + + +D +F P V Y + D+ + +Y + ++ +RK + A +L Sbjct: 283 VPDKFIELAREDKDYYMFYPHSVYKEYGQYL-DELDINEMYDELVENPRVRKAKGNARKL 341 Query: 399 FSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLC--LEIALPTKPLND 451 + R+ +G YI D+ N P + I+ V+ SNLC E L T+ + Sbjct: 342 LEQLAILRSESGYPYIMFADNVNKVHP-NEHISKVKFSNLCVTGETLLLTENGYE 395 Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 75/344 (21%), Positives = 138/344 (40%), Gaps = 37/344 (10%) Query: 433 VRQSNLCLEIALPT----KPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRA 488 + N C E+ + D DE G C L + N+ + + + +A+ + Sbjct: 761 IVTGN-CSEVLQSSQVSVYTDYDKEDEIGLDISCNLGSMNIVNVMSNQSIASTVRIAIDS 819 Query: 489 LDALLDYQDY-PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 L + + PA R R++G+G +N +LA++ Y A + + F + Sbjct: 820 LTTVTRKTNIVNAPAVARANTLMRSIGLGQMNLHGFLAQNNIAYESEEAKDFANTYFMMV 879 Query: 548 QYYLLKASNELAKEQG-ACPWFNETTYAKGIL----------PIDTYKKDLDTIANEPLH 596 +Y L+ S E+A+E G F+ +TY G P K L + P Sbjct: 880 NFYSLQRSMEIARETGETYYKFDGSTYKSGEYFEKYVTNDYSPQYEKVKKLFGDQHIPNI 939 Query: 597 YDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVV 656 DW L+E + +GL +S A+ P+ + S + ++T G+ P + + + + Sbjct: 940 QDWMKLKEDVMKYGLYHSYRQAIAPTGSISYVQSSTAGVMPIMERIEERTYGNSKTYYPM 999 Query: 657 PDYEHLHDA-YELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLL 715 P + Y+ ++M + L+ +Q+ +DQ IS + + + L Sbjct: 1000 PGLSAQNWFFYKEAYDMDMFK-VVDLIATIQQHVDQGISFTLFLKDT------MTTRDLN 1052 Query: 716 KDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGAC 759 + L A+ G+KTLYY T+D + +GC S Sbjct: 1053 RIDLYAHHRGIKTLYYARTKDTTQ------------EGCLSCVV 1084 >UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=Thermococcaceae RepID=Q5JJ43_PYRKO Length = 1746 Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats. Identities = 74/337 (21%), Positives = 125/337 (37%), Gaps = 57/337 (16%) Query: 442 IALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVRALDA 491 I+ N + E C L++ NL + DE + + LD Sbjct: 1288 ISNGFMSHNCGEEPLYEYESCNLASINLAKFVKYDDEGKPYFDWDEYAYVIQKVAKYLDN 1347 Query: 492 LLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYL 551 +D +P+P R R +G+G++ A L K G Y+ + K E + +Y Sbjct: 1348 AIDVNKFPLPEIDRNTKLTRRIGVGMMGLADALFKLGIPYNSKEGFDFMRKATEYLTFYA 1407 Query: 552 LKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGL 611 K S E AKE+G P + +T Y G LP++ + E + W+ L E IK +G+ Sbjct: 1408 YKRSVEAAKERGPFPLYEKTRYKDGELPVEGF------YHREIWNLPWDELVEEIKKYGV 1461 Query: 612 RNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVP-------------- 657 RN ++ P+ + S I++ ++GIEP V K+ G V P Sbjct: 1462 RNGMVTTCPPTGSVSMIADTSSGIEPIFALVYKKSVTVGEFYYVDPVFEAELKKRGLWSD 1521 Query: 658 ------------------DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNY 699 E + + ++ D ++ +Q ++ S S N Sbjct: 1522 EILKKISDNYGSVQGLEEIPEDMQRVFVTAMDIHWLD-HILAQANIQLWLTDSASKTINM 1580 Query: 700 DPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNT 734 ++ + L AYK G K T+Y + Sbjct: 1581 P------NDATVEDVKAAYLLAYKLGCKGVTVYRDGS 1611 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 28/188 (14%) Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 G+N ++R G + +G + F QGGVR GA +WH ++ Sbjct: 756 TGLNFSKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDI 815 Query: 314 ESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQE 373 E + K N + + + V + + + L +G+ L +P + Sbjct: 816 EKFIHAKEKNTG-TNVLSNFNISVGLWEDFWEALKEGKRYPLINPRTGEKV--------- 865 Query: 374 EFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIA-P 432 + + LF + + + D N + +PA Sbjct: 866 -----------------KEIDPKSLFEELAYMAWAKADPGVVFFDVINRRNVLEPAKGEK 908 Query: 433 VRQSNLCL 440 +R +N C+ Sbjct: 909 IRATNPCV 916 Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 92/307 (29%), Gaps = 67/307 (21%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQV------ELRSHIQFYDGI--KTSD 57 V KRDG + ++I + A + + +R + YDG + Sbjct: 5 KVMKRDGRIVPFDKERIRWAIQRAMLEVGVRDEKLLNRVVRRVVRRVNELYDGQIPNIEN 64 Query: 58 IHET----IIKAAADLISRDAPDYQY--------------------------------LA 81 I + +++A +++ Y+ LA Sbjct: 65 IQDIVELELMRAGLFDVAKAYILYRKKKAEIREEKKKILNKDKLDEIDKRFSLNALRVLA 124 Query: 82 ARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLED------------YTEEEFK 129 +R I + + + ++ ++ YD + + E Sbjct: 125 SRYLIKNEKGEIIESPRELFERVAILAVIPDILYDERVFDKNGGHEQDVSAIERYRENLD 184 Query: 130 QMDTF--IDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRE 187 + D I R + + + L + + ++ I E + ++ F NY E Sbjct: 185 EYDGKFSIGRFRLNKWHFERLLNLYRELAEKGQMKLPIDE----VLKMLENGAFDNYEDE 240 Query: 188 TRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKY 247 ++ ++ ++ TP + P S+C ++ D ++SI + + Sbjct: 241 -----IEEYFRLMTGQYFMPNTPALINSGRPLGMLSACFVVPIEDDMESIMKAAHDVAMI 295 Query: 248 VSQRAGI 254 G Sbjct: 296 QKAGGGC 302 >UniRef50_B6IYQ9 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodospirillum centenum SW RepID=B6IYQ9_RHOCS Length = 1191 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 96/296 (32%), Gaps = 37/296 (12%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKIS 206 + + + KY ++ + + + VA L + + +RF A+ F+ Sbjct: 22 SRQIWDMKYRLKAPDGAPVDATVADTWTRVARALAAPERDP--AAWEERFRSALEGFRFL 79 Query: 207 LPTPIMSGVRTPTR-QFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRAL 264 I++G T +C ++ D + I A + Q GIG + +R Sbjct: 80 PAGRILAGAGTRRTVTLFNCFVMGTVPDDMGGIFAHLREAALTLQQGGGIGYDFSTLRPK 139 Query: 265 GSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRG 324 G+P+ G A +G + F + + ++ G R GA H ++E + K G Sbjct: 140 GAPVAGVGADASGPVSFMDVWDSMCRTIMSAGSRRGAMMATLRCDHPDIELFIDAKREPG 199 Query: 325 VEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK 384 R+R+ + V + + L Sbjct: 200 ----RLRNFNLSVLATDDFMAAVREDRPWPLRF--------------------------- 228 Query: 385 DDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 D + V A L+ +M+ + +D N + + +N C+ Sbjct: 229 -DGRVFRTVPARALWDRIMRATYDYAEPGVIFIDRINEQNNL-SYCETISATNPCV 282 Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats. Identities = 83/381 (21%), Positives = 141/381 (37%), Gaps = 67/381 (17%) Query: 389 RKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKP 448 +R E ++ + E G + +V + F+ V C E LP Sbjct: 612 ACRRRPDREDWTAEVAELVPDGEAEVFDV-RIPGANAFEANGLVVHN---CGEQPLPP-- 665 Query: 449 LNDVNDENGEIALCTLSAFNLGAIN----------NLDELEELAILAVRALDALLDYQDY 498 C L + NL A+ + +EL + LAVR +D ++D + Sbjct: 666 ----------YGACLLGSVNLAALVRDPFTPAARLDREELARVVPLAVRMMDNVVDVSRF 715 Query: 499 PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNEL 558 P+ A + A +R +G+GV A L G RY + LT + AIQ + S L Sbjct: 716 PLEAQEAEAQAKRRIGLGVTGLADALILCGVRYGSEAGVRLTEEWLRAIQVAAYRTSAAL 775 Query: 559 AKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSA 618 A E+GA P F+ + + + +RE+I G+RN+ +++ Sbjct: 776 AAEKGAFPLFDREAFLE----------------RPMVRALPPDVREAIAAQGVRNALVTS 819 Query: 619 LMPSETSSQISN-ATNGIEPPRGYVSIKASKD---------------GILRQVVPDYEHL 662 + P+ T S + ++GIEP Y +A + R+ + L Sbjct: 820 IAPTGTISLFAGNVSSGIEPVFAYEYQRAVLMPDGSRRTETVQDLAYRLYRERMGPDAPL 879 Query: 663 HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAY 722 DA+ + +L + Q+ +D +IS N +P + AY Sbjct: 880 TDAFVDAQSL-EPAAHLVMQAAAQRHVDSAISKTINCP------ADLPFEAFKDVYRQAY 932 Query: 723 KFGVK--TLYYQNTRDGAEDA 741 + G K T Y N G+ + Sbjct: 933 ELGCKGCTTYRPNAVTGSVLS 953 >UniRef50_A4L245 Ribonucleotide reductase large subunit n=1 Tax=Gryllus bimaculatus nudivirus RepID=A4L245_9VIRU Length = 683 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 117/724 (16%), Positives = 244/724 (33%), Gaps = 126/724 (17%) Query: 98 EPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLV 157 + Y+++ ++ E + + + + F+ AA++ L+ +YL Sbjct: 22 KKHEKYENIYNQLKNDVKTLQCFRKTVNIEQTKYPFLLTYINNYIFTGAAIQLLQERYLN 81 Query: 158 QNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRT 217 + E+ Q + +A+ N + + + Y +S I + + I T Sbjct: 82 KG-------ENIQEGFARIASYFCDN----SNVPLWRNIYKCLSATNILVSSVIARYQDT 130 Query: 218 PTRQFS----------------SCVLIECGDSL-DSINATSSAIVKYVSQRAGIGINAGR 260 + ++ +C+L + + + Y+++ GIG+ Sbjct: 131 YSSSYATVAGVTRDEDTTTKGKACLLAVMPEKYNEDALRLMWKLFDYLAKGIGIGLCIDN 190 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 + GS G E G F + R ++ ++ + +L ++ Sbjct: 191 VPKYGSD--GYEYIKGGIHEFLDLLSHVNGV--RITKRESNFAVYISIYRDTLYDVLNIR 246 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 N++ ++ V+I + ++ E LF ++ L +++EFE LY Sbjct: 247 QRN---KNKLLNVFPAVKIPNMFMKKVRNNEAWYLFDVTESQLLDKT--KNEKEFEELYE 301 Query: 381 KYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 + + ++ ++F +++ TG YI +D+ N + + ++ NLC Sbjct: 302 TFVSEQK-YTNMYESRKIFKDIIKNILMTGSPYIIFIDNVNKFNNIK-HLGKIKTLNLCS 359 Query: 441 EIALPTKPLNDVNDENGEIALCTLSAFNLGAI-------------------NNLD----- 476 EI I+ C L + N+ N Sbjct: 360 EITNYC--------NEDVISTCLLLSVNVANFKHQWDLVSSLENILSKEFNVNFKDDDFV 411 Query: 477 -ELEELAILA------VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGK 529 EL+E + L + L A + + G+ RR +G+ + + Sbjct: 412 IELDETSKLCWSYCKIMGFL-ATVCLNYF------LGSSKRREIGVSPLGVYDAIIISK- 463 Query: 530 RYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNETTYAKGILPIDTYKKDLD 588 E++ + AS +K+ G C F + +++G D Sbjct: 464 ---TDQPLFFCKLISESLYKGCVLASVAWSKKFGIRCKNFENSCFSRGEFQFDLRNLTYK 520 Query: 589 TIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGI-EP---------- 637 I+ DW +L+ + +G+ NS L+ P+ T+S +++ T + EP Sbjct: 521 NIS------DWSSLKRDVLLYGMANSLLTCQAPTATTSLLADVTPSVTEPHDCCDFICRE 574 Query: 638 --PRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISA 695 R K+ ++ V + L + +IDQS S Sbjct: 575 HSFRSLSLSYVMKNFFIKNNVEMINFSKKLF-------QLKLSKNLYKVSLPYIDQSQSV 627 Query: 696 NTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQDDGC 754 N G +L++ L+ AY KT LYY N + D +++ C Sbjct: 628 ILN--------GNFSSLELMEYLIYAYNNDFKTALYYINLKSTGTSMLYD-DTKKENEIC 678 Query: 755 ESGA 758 +S + Sbjct: 679 DSCS 682 >UniRef50_A3QTY4 Ribonucleotide reductase large subunit n=2 Tax=Oryctes rhinoceros virus RepID=A3QTY4_9VIRU Length = 737 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 120/727 (16%), Positives = 236/727 (32%), Gaps = 111/727 (15%) Query: 96 QFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKY 155 Y G+ + + + +++D DRD +S ++ L+ +Y Sbjct: 57 DLSTIHKYRDSESDPVNGETFRKWFPNIGNADIDVL-SWLDTDRDFIYSSHGMRLLKNRY 115 Query: 156 LVQNRVTGEIYESAQFLYILVAACLF------------SNYPRETRLQYVKRFYDAVSTF 203 L+ E Q+ + +A N + Q + YD +S Sbjct: 116 LL-------PAEPIQYCMLRIAKLFSRRNSSNNSSSSDGNSIDDINFQLWRLMYDVLSCG 168 Query: 204 KISLPTPIMSGVRTPTRQFS---SCVLIECGDSLD-SINATSSAIVKYVSQRAGIGINAG 259 + I++ + +C L+ C D + + I +S G+G++A Sbjct: 169 -YMHTSSILADADNADKNIVPGEACRLLVCNPDYDRAFVNQINEICNLISLGVGVGMSAS 227 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 + G + G G F + + R ++ M + + L Sbjct: 228 TVPLHGYAVNG--KIRGGFKSFARKLDSCNYLSIY--ERKPKIAIYIEMHNNTIYEAFEL 283 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 +N N + ++ G+ + ED LF +E++R+Y Sbjct: 284 RNPL---TNHLENVFVGIMVPDYFIECYENDEDWYLFPGDAKLDGRTLCEFTGDEYKRMY 340 Query: 380 TKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLC 439 ++ + ++ +V + L ++ + TG Y+ D+ N S + ++ NLC Sbjct: 341 KRFV-EANLYTNKVSSSALMDDLVTCISETGSPYVVWSDNVNRFSNHK-HLGKIKTLNLC 398 Query: 440 LEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELA----------------- 482 EIA G+ + CTL + N ++ + Sbjct: 399 AEIANYAS--------VGKSSSCTLMSVNFAMYREFPDVLDRVYAFVEEHSEFDAGYNGF 450 Query: 483 -ILAVRALDALLDYQDYPIPAAKR--------GAMGRRTLGIGVINFAYYLAKHGKRYSD 533 A A + Y + +R LG+ + G Sbjct: 451 HRAASEFQHATMSKYAYAMGFVATWALNMFMGVTRKQRELGVSPLGAYDMAIMDGV---- 506 Query: 534 GSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNETTYAKGILPIDTYKKDLDTIAN 592 + + EA+ + +S + A+ C ++ + +++GI + Sbjct: 507 -DPVKVIAELSEAMYKGCIYSSCKFARMYDVECAYYKGSPFSEGIPQWLLRDE------R 559 Query: 593 EPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI- 651 + + DW E ++T + NS L+A P+ T+S + + P V + S++G Sbjct: 560 KIITTDWTKTCELMRTK-MANSQLTAQAPTATTSMLVGEAESVTIPMSIVMARESENGRN 618 Query: 652 -LRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVP 710 L Y+ L + E L D L + FIDQS S S + Sbjct: 619 DLICYGLLYKLLMEPAEPLHLDNDIDRQLLMYARSAPFIDQSQST--------MFSIVLS 670 Query: 711 MQQLLKDLLTAYKFGVKT-LYY------------------QNTRDGAEDAQDDLVPSIQD 751 Q +L ++ Y +KT +YY R+ + D Q S + Sbjct: 671 RQNILNLIMDTYYLKLKTAIYYTLPKQINNTLTIVRQTPQPQKRESSTDCQFSPKRSRR- 729 Query: 752 DGCESGA 758 CE+ + Sbjct: 730 PSCEACS 736 >UniRef50_Q6QXF6 ORF37 n=3 Tax=Baculoviridae RepID=Q6QXF6_GVAS Length = 615 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 104/667 (15%), Positives = 207/667 (31%), Gaps = 107/667 (16%) Query: 139 RDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYD 198 R ++ + L+ + E+ + ++ + E ++ + Sbjct: 8 RLNNLQEFGRIIMKERMLLDD------VETPEEFCQRISRGMVKLDDEEKKIAHAT---A 58 Query: 199 AVSTFKISLPTP--IMSGVRTPTRQFSSCVLIECGDSLDSINAT--SSAIVKYVSQRAGI 254 +S+ I + ++ S+C L S ++ + I K G+ Sbjct: 59 LLSSVSIIPSSALCQHLNLQRNDTTPSACHLTVFSHSYEAFSKLNELDRIAKMAIMGTGV 118 Query: 255 GINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVE 314 G+ +R GS + G + ++ A R +F + H+ Sbjct: 119 GVGGDYLRYKGSNVAGELKNS--FVEICQYLNAATTL--NVSARKSRVAVFLSLHHICSM 174 Query: 315 SLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE--DITLFSPSDVPGLYDAFFADQ 372 L L+ ++ YGV I K + F + Sbjct: 175 ICLTLRQQNA---RVTSNIFYGVMIPNFFMEMQRKDKNAMWYFFDGNTTLEGLSLNDCYG 231 Query: 373 EEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP 432 EE+E LY + + + +++ A ++ ++ G Y+ DH N + + Sbjct: 232 EEYESLYWRMV-EKKLYVKKMYATQVLGELISCLTENGFPYVVWRDHVNMFNNHRD-LGT 289 Query: 433 VRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI-NNL---DELEELAILAVRA 488 ++ NLC EI + + ++CTL N+ A + EE+ Sbjct: 290 IQTLNLCTEICQ--------HAGSDSSSMCTLMTVNIAAYCEDYPLCKMYEEIVE----- 336 Query: 489 LDALLDYQDYPI----PAAKRGAMGR--------------------------RTLGIGVI 518 + +Y + P R R LG+ Sbjct: 337 -----ELAEYGLHQCCPQFDETNEARLLMHCFTASYTSTFLLNRLLGDKTSRRELGVTPT 391 Query: 519 NFAYYLAKH---GKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGA-CPWFNETTYA 574 + Y+ + + + E + + +S ++ C F+++ +A Sbjct: 392 GLFDAVYILCGRDAAYN-DAMIHYSALVAEYMYIGCVLSSIVYNRKFNVICVNFSKSEFA 450 Query: 575 KGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNG 634 KG+ D L W +R +K G+ NS L+A P+ T+S ++N T Sbjct: 451 KGLFQFDLRNVTPS------LSLLWNRIRPFMKK-GMANSMLTAQAPTATTSLLTNVTES 503 Query: 635 IEPPRGYVS--IKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQS 692 ++ P K S G + ++ +Q+ M ++DQS Sbjct: 504 VQFPMSGAVQTTKNSGTGRFANIPFFLYKSNETDIGFNRPVTIAKQVQVFAKMAPYVDQS 563 Query: 693 ISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQDDLVPSIQD 751 S N + + + L Y +KT LYY + P I Sbjct: 564 QSVIINC--------SSTYEDVFRILRYTYDNKLKTALYY--------TVFNSNTPYIDL 607 Query: 752 DGCESGA 758 GC++ Sbjct: 608 SGCDACT 614 >UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyrococcus RepID=Q9UYA0_PYRAB Length = 2122 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 72/337 (21%), Positives = 125/337 (37%), Gaps = 57/337 (16%) Query: 442 IALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVRALDA 491 I+ N + E C L++ NL + DE + + LD Sbjct: 1671 ISNGFMSHNCGEEPLYEYESCNLASINLAKFVKYDENGKPYFDWDEYAYVIQKVAKYLDN 1730 Query: 492 LLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYL 551 +D +P+P R +G+G++ A L K G Y+ K E + +Y Sbjct: 1731 SIDVNKFPLPEIDYNTKLTRRIGVGMMGLADALFKLGIPYNSEEGFKFMRKVTEYLTFYA 1790 Query: 552 LKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGL 611 K S E AK++G P + +T Y KG LP++ + E + W+ L E IK +G+ Sbjct: 1791 YKYSIEAAKKRGTFPLYEKTGYPKGELPVEGF------YHPEIWNLPWDKLVEEIKKYGV 1844 Query: 612 RNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVP-------------- 657 RN+ ++ P+ + S I++ ++GIEP V K+ G V P Sbjct: 1845 RNAMVTTCPPTGSVSMIADTSSGIEPIFALVYKKSVTVGEFYYVDPVFEAELKRRGLYSE 1904 Query: 658 ------------------DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNY 699 E + + ++ D +L +Q ++ S S N Sbjct: 1905 ELLKKISDNYGSVQGLEEIPEDMRRVFVTALDIHWLD-HLLAQANIQMWLTDSASKTINM 1963 Query: 700 DPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNT 734 + ++ + L A+ G K T+Y + Sbjct: 1964 ------INEATVEDVKAAYLIAHFLGCKGVTVYRDGS 1994 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 28/166 (16%) Query: 276 TGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDY 335 +G + F QGGVR GA +WH ++E + K + N + + + Sbjct: 1161 SGPVSFMHLIDAVSDVIKQGGVRRGANMGILEIWHPDIEKFIHAKEKN-IGTNVLSNFNI 1219 Query: 336 GVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKA 395 V I + + L +G+ L +P + + Sbjct: 1220 SVGIWEDFWEALKEGKKYPLINPRT--------------------------GEVVKEIDP 1253 Query: 396 VELFSLMMQERASTGRIYIQNVDHCNTHSPFDP-AIAPVRQSNLCL 440 LF + + + D N + P+R +N C+ Sbjct: 1254 KTLFEELAYMAWAKADPGVIFFDIINRRNVLKEAKGGPIRATNPCV 1299 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 92/303 (30%), Gaps = 59/303 (19%) Query: 6 LVTKRDGSTERINLDKIHRVLDWAAEGLHNVS---ISQVELRSHIQ---FYDGI--KTSD 57 V KRDG + +I + A + + +V + YDG + Sbjct: 5 KVMKRDGRIVPFDESRIRWAVQRAMWEVGVRDERKLDEVVKNIVKRINELYDGKIPHIEN 64 Query: 58 IHET----IIKAAADLISRDAPDYQY--------------------------------LA 81 I + +++A +++ Y+ LA Sbjct: 65 IQDIVELELMRAGLFEVAKAYILYRKKKAEIREEKKRILNKKELDEIDKRFSINALRVLA 124 Query: 82 ARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLED--YTEEEFKQMDTFIDHDR 139 +R ++ ++ YD + + +++ K+++ ++++ Sbjct: 125 SRYLKRDENGNIIESPRELFERVSILAVIPDLLYDERVFDKDGNYKQDLKRVEYYLENFE 184 Query: 140 DMTFSYAAVKQLEGKYLVQN--------RVTGEIYESAQFLYILVAACLFSNYPRETRLQ 191 Y+ K KY + G++ S ++ F Y +E Sbjct: 185 KFDGKYSIGKYKLNKYHFERMVNLYRELAEKGKMKVSIDEFLSMLERGEFDKYEKE---- 240 Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQR 251 ++ ++ ++ TP + P S+C ++ D ++SI + + Sbjct: 241 -IEEYFKLMTNQVFMPNTPALINSGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKMG 299 Query: 252 AGI 254 G Sbjct: 300 GGC 302 >UniRef50_Q91ES8 ORF127 RR1 n=2 Tax=Baculoviridae RepID=Q91ES8_GVCP Length = 624 Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats. Identities = 106/600 (17%), Positives = 202/600 (33%), Gaps = 75/600 (12%) Query: 167 ESAQFLYILVAACLFSNYPRETR-LQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSC 225 ES ++ L +N+P ++ + ++ + + + Sbjct: 27 ESPDQFVHRMSRLLTNNHPTKSDAVAHLLSSVSLIPSSSLCH----HFNTGDGIPSACCL 82 Query: 226 VLIECGDSLDSINATSSAIVKYVSQRAGIGI------NAGRIRALGSPIRGGEAFHTGCI 279 + ++D+ + I + + G+GI N RA G +R + Sbjct: 83 FVFSKDHNVDAKFEELTRIARVAIKGTGVGIGADSLKNKSTTRAPGE-LRNTY------V 135 Query: 280 PFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQI 339 F K + VR ++ + + L L+ ++ ++ YG+ + Sbjct: 136 DFCKSLNHLINL--SVTVRQSRVAVYVSLHNTTAYESLFLRQTGNIQTE---NIFYGIMV 190 Query: 340 NKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELF 399 L + +G F EE+ERLY + + I+ + V EL+ Sbjct: 191 PDLFVRKQKEGGVWHFFDNDAQVDGKSLNDCYGEEYERLYEEMVRRG-IQIKSVNVWELW 249 Query: 400 SLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEI 459 ++ A+ G YI D N ++ + V+ NLC E+ + Sbjct: 250 GEIVNCLATNGYPYIVWRDTVNKYNNQQA-LGVVKTLNLCAEVCQHATDS----TVDTNT 304 Query: 460 ALCTLSAFNLGAINN---------LDELE--ELAILAVRAL--DALLDYQDYP------I 500 +LCTL N+ A D+L ++ + L + +LD+ Y + Sbjct: 305 SLCTLMTLNVAAFCEDYTQHWHLIYDDLRQCQIPEQCIPPLGENKILDHCFYGGYMSTFV 364 Query: 501 PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT-----HKTFEAIQYYLLKAS 555 G RR +G+ L Y + + E I + S Sbjct: 365 LNCVLGESKRREIGVSPTGLFDALHIM---YGAAATYEYAMDDYSARVAEYIYLGCVVGS 421 Query: 556 NELAKEQG-ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNS 614 + G C F + +++G+ D L W +R G+ NS Sbjct: 422 VVYNRLYGVECVNFRASRFSEGVFQFDLRGVTPS------LTLQWACIRPHAMR-GMANS 474 Query: 615 TLSALMPSETSSQISNATNGI-EPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMP 673 L+ P+ T+SQI+N T + P G ++ K S+ G + Y H + Sbjct: 475 MLTTQAPTATTSQITNVTESVQYPLPGRITTKNSETGRFADLPF-YAHFTNQPPSRHPHV 533 Query: 674 GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKT-LYYQ 732 +++ ++DQS S +P ++ K L+ +K +KT +YY Sbjct: 534 SPLRQIKVYANTAPYVDQSQSTIIYCEPKN--------DEISKVLVYTHKAQLKTGVYYL 585 >UniRef50_B1I483 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I483_DESAP Length = 1121 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 105/300 (35%), Gaps = 38/300 (12%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVST 202 S + K E +Y ++ G + E+ + +A + R + ++F ++ Sbjct: 7 LSDSGQKVFEARYAAKDE-QGRVTETFEQAVHRLARTTALAEKAQDRAAWEEKFAASIGG 65 Query: 203 FKISLPTPIMSGVRTPTR--QFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGR 260 TPI + + R Q +C ++ DSL+S+ T G+G N Sbjct: 66 LLFVPSTPIWANIGKTDRPWQPGACFVLAVEDSLESMYQTLKDTAMVFKSGGGVGYNFSA 125 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 IR GS +R + +G + + + + QGGVR GA+ + H E+ + K Sbjct: 126 IRPRGSMVRSTKGQASGVVELIRLYDASSGMVMQGGVRRGASMGILNIDHPEIIHFINSK 185 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYT 380 G + H + V + L + ED L Sbjct: 186 R-----GGDITHFNLSVGVTDAFMEALERDEDWPLVF----------------------- 217 Query: 381 KYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 + Q V A EL+ L+ + + G I +D +P + +N C+ Sbjct: 218 -----NGEVHQTVPARELWDLITESAHACGDPGIIFLDRLQRDNPVPEK--KINATNPCV 270 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 67/405 (16%), Positives = 116/405 (28%), Gaps = 114/405 (28%) Query: 388 IRKQRVKAVELFSLMMQERASTG--------RIYIQNVDHCNTHSPFDPAIAPVRQSNLC 439 +R E F+ + G I + FD + N C Sbjct: 597 EAYKRDLNRERFTATVLCVEEDGIEDVYDVQVPGI---------NAFDANG--IVAHN-C 644 Query: 440 LEIALPTKPLNDVNDENGEIALCTLSAFNLGAI---------NNLDELEELAILAVRALD 490 E L C L + NL + + + L + L +R LD Sbjct: 645 GEQPLSPGE------------SCLLGSVNLARMLKPGRDGYVVDWELLRDTVRLGIRFLD 692 Query: 491 ALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYY 550 L+D +YP+ R +G+G L K G Y F+A+Q Sbjct: 693 NLIDVAEYPLEFIAEATRATRKVGLGYTGLHDLLIKMGLPYDAEEGRRFAGTVFKAVQDA 752 Query: 551 LLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHG 610 L S ELA E+G P + + + Sbjct: 753 ALAYSRELAGERGCFPEWERS-----VFHPHEK--------------------------- 780 Query: 611 LRNSTLSALMPSETSSQISNATN-GIEPPRGYVSIKAS---------------------- 647 RN+ + P+ + + I+ GIEP K + Sbjct: 781 RRNAACITVAPTGSVTTIAGCEGYGIEPIFAVAYTKDTDVAGSFEVFSPLFLEACERLGV 840 Query: 648 ---------KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTN 698 + G + V L ++ E+ D ++ + +QK++ ++S N Sbjct: 841 SREVMSEVARRGGCQGVEGVPPELARIFKGAQEISPRD-HILMQAEVQKYVCNAVSKTIN 899 Query: 699 YDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDA 741 S + + AY+ G+K T++ + G Sbjct: 900 LPNS------ATIHDIETCYRLAYELGLKGVTVFRDGCKQGVVTV 938 >UniRef50_A1TJY2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=3 Tax=Comamonadaceae RepID=A1TJY2_ACIAC Length = 1226 Score = 275 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 94/303 (31%), Gaps = 31/303 (10%) Query: 147 AVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKIS 206 ++ L KYL E Y VA L S E R RF + I Sbjct: 23 SLDVLREKYLKPGEADAETL------YRRVARALASVEAPEVREAIEARFLANLRAGAIG 76 Query: 207 LPTPIMSGVRTP-TRQFSSCVLIECGDSLDS--------INATSSAIVKYVSQRAGIGIN 257 IMS T +C + GD + I + + + G+G + Sbjct: 77 -AGRIMSAAGTAIQATLINCFVQPVGDCIQGMDEGGYPGIYEALREAAETMRRGGGVGYD 135 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLL 317 RIR G+ ++G + +G + F + + G R GA + H +V + Sbjct: 136 FSRIRPRGAEVKGTASMASGPCSYINVFDQSCATVESAGARRGAQMGVLRIDHPDVLDFI 195 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFER 377 K G R + + V + +L L P+ Sbjct: 196 TAKRTPG----RWNNFNVSVGVPDAFVQAVLDDAPWELVHPA----------RPGAALRE 241 Query: 378 LYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSN 437 + D + + A EL+ +M+ I +D NT + + +N Sbjct: 242 EGARQRADGQWVYRTLPARELWDTIMRSAYDFAEPGILFLDRVNTDNNL-AYCESIAATN 300 Query: 438 LCL 440 C+ Sbjct: 301 PCV 303 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 93/382 (24%), Positives = 143/382 (37%), Gaps = 69/382 (18%) Query: 390 KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPL 449 +R E F+ +Q+ G + +V + FD V C E LP+ Sbjct: 645 YRRALNREPFTATVQDVLPDGHEDVYDVTVADC-HAFDANGLCVHN---CGEQPLPS--- 697 Query: 450 NDVNDENGEIALCTLSAFNLGAI------------NNLDELEELAILAVRALDALLDYQD 497 C L L + D VRALD +LD Sbjct: 698 ---------YGCCDLGPIILPRFVRHPFGFAGEPAFDFDAFAASVATQVRALDNVLDVTF 748 Query: 498 YPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNE 557 +P+P + + +R +G+G LA RY + + + E ++ AS E Sbjct: 749 WPLPQQRAESAAKRRIGVGFTGLGNTLAMLRLRYDTDAGRAMAMRIAECMRDAAYAASVE 808 Query: 558 LAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLS 617 LAKE+G P F+ A G L T+ L AL+E+I+THG+RNS L Sbjct: 809 LAKEKGVFPKFD----AAGYLAPGTFASRLPA-----------ALQEAIRTHGIRNSHLL 853 Query: 618 ALMPSETSSQIS--NATNGIEPPRGYVSIKASK---------------DGILRQVVPDYE 660 ++ P+ T S NA+NGIEPP + + + + + D Sbjct: 854 SIAPTGTVSLAFADNASNGIEPPFSWTYTRRKREADGSTSEYAVEDHAWRLYGALGGDVN 913 Query: 661 HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT 720 L D + +MP G++ ++ +Q FID +IS N P + L Sbjct: 914 ALPDYFVSALQMPAA-GHIAMMEAVQPFIDTAISKTVNMP------ADYPYEDFKNLYLH 966 Query: 721 AYKFGVKTL--YYQNTRDGAED 740 A++ +K L Y N GA Sbjct: 967 AWRARLKGLATYRPNAILGAVL 988 >UniRef50_D2LPU1 Ribonucleotide reductase large subunit n=3 Tax=Euryarchaeota RepID=D2LPU1_9EURY Length = 355 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 118/344 (34%), Gaps = 89/344 (25%) Query: 431 APVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN-----LDELEELAILA 485 + +N C E L C L + NL D+L + A Sbjct: 2 GEIESTNPCGEQPLLP------------YESCNLGSINLSLFVENGKIKWDDLRDTVHTA 49 Query: 486 VRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFE 545 V +D ++D +YP+P R +G+GV+ +A L K G Y A L K + Sbjct: 50 VHFMDNVIDANNYPLPQVAEMTRRSRKIGLGVMGWAEMLIKLGIPYDSEEAVELAEKVMK 109 Query: 546 AIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRES 605 I +AS +LA+++G P + + + W+ + Sbjct: 110 FINEESHRASMKLAEKRGVFPAWEGSEW-------------------------WKKGMK- 143 Query: 606 IKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS------------------ 647 +RN+T + + P+ T S I+ ++ IEP I+ Sbjct: 144 -----IRNATTTTIAPTGTISIIAGTSSSIEPLFAIAFIRRVLDGQELLEVNPLFEEIMK 198 Query: 648 --------------KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSI 693 + G ++ + E++ + ++ ++++ QK++D ++ Sbjct: 199 REGLYSEELMHKVAETGSVQHIDDVPENIKRLFRTAHDID-PVWHVRMQAAFQKYVDNAV 257 Query: 694 SANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTR 735 S N + + + A+K K T+Y ++ Sbjct: 258 SKTVNL------RHDASISDVEDTYILAWKLKCKGITIYRDGSK 295 >UniRef50_Q122S1 Ribonucleoside reductase n=3 Tax=Proteobacteria RepID=Q122S1_POLSJ Length = 1189 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 98/301 (32%), Gaps = 31/301 (10%) Query: 149 KQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLP 208 L+ KYL + LY VA L S P R ++ F + + I Sbjct: 21 DVLKEKYLKPGENG------VEDLYRRVARALASVEPEAARAEHEALFLENLHAGAIG-A 73 Query: 209 TPIMSGVRTP-TRQFSSCVLIECGDSLDS--------INATSSAIVKYVSQRAGIGINAG 259 IMS T +C + GD + I + + + G+G + Sbjct: 74 GRIMSAAGTSIQATLINCFVQPVGDCIQGMDDGGYPGIYEALREAAETMRRGGGVGYDFS 133 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 RIR G+ ++ + +G + F + + G R GA + H +V + Sbjct: 134 RIRPRGAEVKATASMASGPCSYINVFDQSCSTVESAGARRGAQMGVLRIDHPDVFEFITA 193 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 K G R + + V ++ L + L A Q F+R Sbjct: 194 KRTPG----RWNNFNVSVGVSDAFMQALGDDQPWELVH----RAKPGARLIAQGAFQR-- 243 Query: 380 TKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLC 439 D Q + A EL+ +M+ I +DH N + + +N C Sbjct: 244 ----ADGLWVYQTLAASELWDTVMRSAYDFAEPGILFLDHINQDNNLR-YCESIEATNPC 298 Query: 440 L 440 + Sbjct: 299 V 299 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 81/372 (21%), Positives = 135/372 (36%), Gaps = 45/372 (12%) Query: 390 KQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPL 449 R E F++ ++ G + +V FD V C E LP Sbjct: 633 YNRSLNRERFTVTVESLTEEGSEDVFDV-TVADIHAFDANGLYVHN---CGEQPLPPYGC 688 Query: 450 NDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMG 509 D+ + FN + D + VRALD +LD +P+P + + Sbjct: 689 CDLGPIILTRFVRNPFGFNGVPDFDFDAFGKSVTTQVRALDNVLDLTFWPLPQQQAESAA 748 Query: 510 RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFN 569 +R +G+G L RY + + ++ AS LAKE+GA F+ Sbjct: 749 KRRIGVGFTGLGNALVMLCLRYDAPEGREMAARIAVCMRDAAYAASVALAKEKGAFLKFD 808 Query: 570 ETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQIS 629 A+G L T+ L L+++I+ HG+RNS L ++ P+ T S Sbjct: 809 ----AEGYLAPGTFANRLPA-----------GLQQAIRAHGIRNSHLLSIAPTGTVSLAF 853 Query: 630 --NATNGIEPPRGYVSIKASK---------------DGILRQVVPDYEHLHDAYELLWEM 672 NA+NGIEP ++ + + + R++ D + L + EM Sbjct: 854 ADNASNGIEPSFSWMYRRRKRESDGSTTDYAVEDHAWRLYRELGGDVDRLPGYFVSALEM 913 Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL--Y 730 ++ ++ +Q F+D +IS N A++ +K L Y Sbjct: 914 SAA-SHIAMMEAVQPFVDTAISKTVNVP------VDYAYDDFKGLYQQAWRARLKGLATY 966 Query: 731 YQNTRDGAEDAQ 742 N GA Sbjct: 967 RPNAILGAVLET 978 >UniRef50_D1GPW6 Ribonucleoside-diphosphate reductase n=1 Tax=Staphylococcus aureus subsp. aureus TW20 RepID=D1GPW6_STAA0 Length = 1091 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 78/365 (21%), Positives = 153/365 (41%), Gaps = 12/365 (3%) Query: 78 QYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDH 137 A L + H++ K QF + +VE Y + + +DY+EE ++ + Sbjct: 25 DKEAIELYLEHIKSKT-KQFS--NQIARLRYLVEEDYYID-VFKDYSEETLLELLDYAYS 80 Query: 138 DRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFY 197 S+ A + Y ++ R + E + ++V+ L + KR+ Sbjct: 81 FGFEFQSFMAASKFYDTYALKTRDKSQWLEDFEQHNVIVSLYLAGG-----DVDLAKRYI 135 Query: 198 DAVSTFKISLPTPIMSGVRTPT-RQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGI 256 A + + TP + +SC L D+L+SIN S + + G+ + Sbjct: 136 KAHTLQTVQTATPTYLNAGRKHRGELASCYLFTMDDTLNSINFIRSQVSQASKIAGGVAV 195 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 N R+R G+ ++G + G +P K + V Q G R GA + ++H +V L Sbjct: 196 NLTRLRGRGATLKGVKNVGKGIVPVAKLIEGEVSYADQLGQRAGAGAAYLNIFHSDVIEL 255 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF-FADQEEF 375 L K E R+ + G+ + L + + +D+ +F P + + D Sbjct: 256 LNTKKVNADEDTRLATLSIGLIVPSLFFDLAKEDKDLYMFEPYSIQEEFGKDVILDDINI 315 Query: 376 ERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQ 435 Y K+ +++++ K ++ A E+ +L+ Q + +G YI D+ N + + + ++ Sbjct: 316 NDWYDKFVENENVIKHKINAREMLNLIAQIQLQSGYPYIMYKDNANKNHALNE-LGEIKM 374 Query: 436 SNLCL 440 SNLC+ Sbjct: 375 SNLCV 379 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 138/355 (38%), Gaps = 48/355 (13%) Query: 433 VRQSNLCLEIALPT----KPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRA 488 + N C EI + DE G+ +C L++ N+ E+EE +RA Sbjct: 757 IVTGN-CTEIFQYMHVSDIKDYNEQDELGQDIICNLASLNMVKSIEEKEIEESIRTGMRA 815 Query: 489 LDALLDYQDYP-IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 L + + +P + R +G+GV++F AK+ RY + +L + + Sbjct: 816 LTFVANNSRIEHLPTVHKANKNNRAVGLGVMSFHSMCAKNKIRYGSEESLDLLNVYCMMM 875 Query: 548 QYYLLKASNELAKEQG-ACPWFNETTYA------------------KGILPIDTYKKDLD 588 YY L S ++A E+ F++T Y K + PI K++ Sbjct: 876 DYYSLDESMKIAVERNDKFYGFDQTDYKAKDDKEFGEYFYKNNRVTKNVEPITPKIKEIF 935 Query: 589 TIANEPLHYDWEALRESIKTHGLRNSTLSALMP--SETSSQISNATNGIEPPRGYVSIKA 646 P DW+ L + +GL NS ++ P +++ S I+N ++ + P V + Sbjct: 936 KGIYIPTKEDWQRLAREVDKNGLYNSYRLSIAPYRTQSISYITNCSSALTPVVDVVEKRK 995 Query: 647 SKDGILRQVVPD--YEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRF 704 + +P E + +++P + + + + QK+IDQ +S Sbjct: 996 YGNSETYYPMPYLSPETMWFYSPTAFDIP-QEHIINVAAVAQKWIDQGVSTILFV----- 1049 Query: 705 PSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGAC 759 + ++ +L + A+ G+K+LYY + + C S A Sbjct: 1050 -NSEIETNKLARLYAYAHDRGLKSLYYTRNKLISIA------------ECTSCAV 1091 >UniRef50_UPI00004BA6C5 truncated ribonucleoside-diphosphate reductase 2, alpha subunit n=1 Tax=Staphylococcus epidermidis RP62A RepID=UPI00004BA6C5 Length = 969 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 78/365 (21%), Positives = 154/365 (42%), Gaps = 12/365 (3%) Query: 78 QYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDH 137 A +L + H++ K QF + +VE Y + + +DY+EE ++ + Sbjct: 25 DKEAIKLYLEHIKSKT-KQFS--NQIARLRYLVEEDYYID-VFKDYSEETLLELLDYAYS 80 Query: 138 DRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFY 197 S+ A + Y ++ R + E + ++V+ L + KR+ Sbjct: 81 FGFEFQSFMAASKFYDTYALKTRDKSQWLEDFEQHNVIVSLYLAGG-----DVDLAKRYI 135 Query: 198 DAVSTFKISLPTPIMSGVRTP-TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGI 256 A + + TP + +SC L D+L+SIN S + + G+ + Sbjct: 136 KAHTLQTVQTATPTYLNAGRKQRGELASCYLFTMDDTLNSINFIRSQVSQASKIAGGVAV 195 Query: 257 NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESL 316 N R+R G+ ++G + G +P K + V Q G R GA + ++H +V L Sbjct: 196 NLTRLRGRGATLKGVKNVGKGIVPVAKLIEGEVSYADQLGQRAGAGAAYLNIFHSDVIEL 255 Query: 317 LVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF-FADQEEF 375 L K E R+ + G+ + L + + +D+ +F P + + D Sbjct: 256 LNTKKVNADEDTRLATLSIGLIVPSLFFDLAKEDKDLYMFEPYSIQEEFGKDVILDDINI 315 Query: 376 ERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQ 435 Y K+ +++++ K ++ A E+ +L+ Q + +G YI D+ N + + + ++ Sbjct: 316 NDWYDKFVENENVIKHKINAREMLNLIAQIQLQSGYPYIMYKDNANKNHALNE-LGEIKM 374 Query: 436 SNLCL 440 SNLC+ Sbjct: 375 SNLCV 379 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 25/213 (11%) Query: 433 VRQSNLCLEIALPTKPLNDVN----DENGEIALCTLSAFNLGAINNLDELEELAILAVRA 488 + N C EI + + DE G+ +C L++ N+ E+EE +RA Sbjct: 757 IVTGN-CTEIFQYMHVSDIKDYYEPDELGQDIICNLASLNMVKSIEEKEIEESIRTGMRA 815 Query: 489 LDALLDYQDYP-IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAI 547 L + + +P + R +G+GV++F AK+ RY + +L + + Sbjct: 816 LTFVANNSRIEHLPTVHKANKNNRAVGLGVMSFHSMCAKNKIRYGSEESLDLLNVYCMMM 875 Query: 548 QYYLLKASNELAKEQG-ACPWFNETTYA------------------KGILPIDTYKKDLD 588 YY L S ++A E+ F++T Y K + PI K++ Sbjct: 876 DYYSLDESMKIAVERNDKFYGFDQTDYKAKDGKEFGEYFYKNNRVTKNVEPITPKVKEIF 935 Query: 589 TIANEPLHYDWEALRESIKTHGLRNSTLSALMP 621 P DW+ L + +GL NS ++ P Sbjct: 936 KGIYIPTKEDWQRLAREVDKNGLYNSYRLSIAP 968 >UniRef50_Q0A8L7 Ribonucleoside-diphosphate reductase n=3 Tax=Ectothiorhodospiraceae RepID=Q0A8L7_ALHEH Length = 1095 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 107/318 (33%), Gaps = 23/318 (7%) Query: 140 DMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP-RETRLQYVKRFYD 198 D+ A+ + KY ++++ I E+ + VA L ++ R + +RF Sbjct: 16 DIPLQSASADIWDKKYRLKSKDGQVIDETVDHTWQRVARALAEVEKTKKLREHWYERFLW 75 Query: 199 AVSTFKISLPTPIMSGVR----TPTRQFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAG 253 A+ I I S P +C + DS+D I + G Sbjct: 76 ALRRGAI-PAGRITSNAGAWAHKPATSTINCTVSGTIQDSMDDILQKVHEAGLTLKAGCG 134 Query: 254 IGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEV 313 IG +R G+ + G A+ +G + F + + S G R GA + + H +V Sbjct: 135 IGYEFSTLRPRGAYVSGAGAYTSGSLSFMDIYDRMCFTVSSAGGRRGAQMATFDVGHPDV 194 Query: 314 ESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQE 373 + K G R+R + + I + + L P + Sbjct: 195 LDFIRAKREDG----RLRQFNLSLLITEEFMQAVEDDAQWPLAFPLTKHEAETDNIDLTD 250 Query: 374 EFERLYTKYEKDD-----------SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNT 422 + ++ ++ + + VKA L+ ++M +D N Sbjct: 251 SEQVIWREWPTTEPYISDEQGLVACRIYRTVKARRLWDMIMTSTYDFAEPGFILIDRVNE 310 Query: 423 HSPFDPAIAPVRQSNLCL 440 + + +R +N C+ Sbjct: 311 MNN-NWFCEDIRATNPCV 327 Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 67/364 (18%), Positives = 114/364 (31%), Gaps = 75/364 (20%) Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVRA 488 C E LP C L + NL + E E+ + R Sbjct: 703 CGEQPLPP------------YGACLLGSVNLTKFVRDPFTEKARFDWQEYAEVVSVFTRM 750 Query: 489 LDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQ 548 LD +++ P+ +R +R G+G + L +Y + + T K + Sbjct: 751 LDNVVEINGLPLDEQRREIERKRRHGMGFLGLGSTLTMLRMKYGEAESLAFTEKVSREMA 810 Query: 549 YYLLKASNELAKEQGACPWFNET-------TYAKGILPIDTYKKDLDTIANEPL------ 595 + ELA+E+G P +ET + + +D YK L Sbjct: 811 LAGWRTGVELAEEKGPAPIMDETYTVDEAMLAKRPEMAVDGYKVGDKVKGRVLLARYSHY 870 Query: 596 ----HYDWEALRESIKTHGLRNSTLSALMPSETS--SQISNATNGIEPPRGYVSIKAS-- 647 L E+I G R S +++ P+ T S +NA+NGIEP + + Sbjct: 871 MQRVAEVDAELVEAIAEKGARFSHHTSIAPTGTISLSLANNASNGIEPSFAHHYFRNVIR 930 Query: 648 -----------------------KDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGI 684 + P+ +L D + + ++ + Sbjct: 931 EGRKSKEKVDVFSFELLAYRHFIDPEAVPSTDPETRNLPDYFITA-DSVTPKQHVDIQAA 989 Query: 685 MQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQ 742 QK++D SIS N P + AY+ G+K T + N Sbjct: 990 AQKWVDSSISKTANVPT------DYPYEDFKDIYRYAYQQGLKGCTTFRFNPEAFQGVLV 1043 Query: 743 DDLV 746 + Sbjct: 1044 TEKD 1047 >UniRef50_B8GMT3 Ribonucleoside-diphosphate reductase n=3 Tax=Thioalkalivibrio RepID=B8GMT3_THISH Length = 1137 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 106/312 (33%), Gaps = 23/312 (7%) Query: 146 AAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYP-RETRLQYVKRFYDAVSTFK 204 AA + KY +++ + ++ VA L R + +RF A++ Sbjct: 19 AARDVWDRKYRLRDATGRPLEDTPAETLARVARALADVEATPALREHWRERFLWALNHGA 78 Query: 205 ISLPTPIMSGVRTPT----RQFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAG 259 + I++ +C + D+LD I + AGIG Sbjct: 79 L-PAGRILANAGARDHKRGTSTINCTVSGTIHDTLDEILGKLREAGLTLQSGAGIGYEFS 137 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 +R G+ + G A +G + F + ++ + G R GA + + H +V + Sbjct: 138 TLRPKGAWVAGAGARSSGPLSFMDVYDQMCRTIASAGDRRGAQMATFHIGHPDVLEFIEA 197 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 K G R+R + + + L G D L P Q+ + ++ Sbjct: 198 KREPG----RLRQFNLSLLVPDAFMAALDAGADWPLAFPLSPAEQARTGADLQDPKQVVW 253 Query: 380 TKYEKDDSI-----------RKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 + + + +Q + A L+ +M+ + +D N + + Sbjct: 254 RHWPETEGYITDGHGRVACRVQQWIPAAALWEQVMRATYDHAEPGVIFIDRVNAENN-NG 312 Query: 429 AIAPVRQSNLCL 440 +R +N C+ Sbjct: 313 FCESIRAANPCV 324 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 65/352 (18%), Positives = 106/352 (30%), Gaps = 75/352 (21%) Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI----------NNLDELEELAILAVRA 488 C E LP C L + +L + D E+ + R Sbjct: 701 CGEQMLPP------------YGACLLGSVDLTRFVQHPFTGKLRFDWDTYREVVAVFTRM 748 Query: 489 LDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQ 548 LD +++ P+ R G+G + LA G RY A T + + Sbjct: 749 LDNVVEIHGLPLAQQAEALERTRRHGMGFLGLGSALAMMGIRYDSPEAAAFTERAARELA 808 Query: 549 YYLLKASNELAKEQGA-----------------CPWFNETTYAKGILPIDTYKKDLDTIA 591 + ELA+E+G P E G + + Sbjct: 809 LTGWRTGLELAREKGPAPLMYERFTVTEHLLARYPALAEDGIRVGDVLPGRVLHARYSPY 868 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISN--ATNGIEPPRGYVSIKAS-- 647 + AL ++ G R + SA+ P+ T + +NGIEP + ++ Sbjct: 869 MRRIAGLDPALVAALAEEGARFTHHSAIAPTGTIALSFGNNVSNGIEPSFAHTYLRNILG 928 Query: 648 KDGILRQVVPD-----------------------YEHLHDAYELLWEMPGNDGYLQLVGI 684 +DG R VP L +A+ ++ +L + Sbjct: 929 RDGATRDTVPVTAYELLAWRALVDPDADPEAKQGPHRLPEAFVTAGDIA-PRAHLAIQAA 987 Query: 685 MQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNT 734 Q +ID +IS N P + A+ G+K T Y N Sbjct: 988 AQPWIDAAISKTINVPT------DCPFEDFRDLYREAHALGLKGCTTYRLNP 1033 >UniRef50_A3JKM6 Ribonucleoside reductase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JKM6_9ALTE Length = 1087 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 106/312 (33%), Gaps = 22/312 (7%) Query: 145 YAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFK 204 A++ KY ++ + + + Y VA L ++ R ++ K F A+ Sbjct: 16 DASLDIWNSKYQLKTKTGDAVDKDILATYERVAQALSEVENKDLRAKHYKDFAWALKHGA 75 Query: 205 ISLPTPIMSGVR----TPTRQFSSCVLI-ECGDSLDSINATSSAIVKYVSQRAGIGINAG 259 I I+S P +C + DS++ I + + GIG Sbjct: 76 I-PAGRIISNAGAQSHKPATSTINCTVSGNINDSMNDILGKNHEAGLTLKAGCGIGYEFS 134 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 +R G+ + G A +G + F F + S G R GA + + H ++ + Sbjct: 135 TLRPRGAYVAGAGATTSGPLSFMDIFDRMCFTVSSAGGRRGAQMATFDIHHPDIIDFIQA 194 Query: 320 KNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 K G R+R + + I + + D +L P + + + + +Y Sbjct: 195 KREDG----RLRQFNLSLLITEDFINAVRDNADWSLSFPVTDKEVEEEDLDLTDTAKFVY 250 Query: 380 TKY-----------EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 + K + +KA ++ +M +D N + + Sbjct: 251 RDFPVVKDYVMNAEGKVACRIYRTLKAQFIWDTIMTSTYDYAEPGFILIDKVNQMNN-NW 309 Query: 429 AIAPVRQSNLCL 440 +R +N C+ Sbjct: 310 FCEDIRATNPCV 321 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 66/355 (18%), Positives = 112/355 (31%), Gaps = 77/355 (21%) Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN----------LDELEELAILAVRA 488 C E LP C L + NL + ++ +++ + R Sbjct: 695 CGEQPLPP------------YGSCLLGSVNLTMFVDDPFTDKASFNYEKYKKVVGIFTRM 742 Query: 489 LDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQ 548 LD +++ P+ + +R G+G++ LA Y + T + Sbjct: 743 LDNVVEINGLPLAQQRHEITYKRRHGMGILGLGSTLAMLRMPYGSEESVVFTEDVVREMA 802 Query: 549 YYLLKASNELAKEQGACP----WFNETTYAKGILPI---DTYKKDLDTIANEPLHYDWEA 601 + S L KE+GA P F T G P D Y D + LH + Sbjct: 803 VEGWRQSLALGKEKGAAPIMDDEFEITPKLLGKCPQLTADGYNLG-DKLKGRVLHAKYSR 861 Query: 602 LRESIKT-----------HGLRNSTLSALMPSETSSQ--ISNATNGIEPPRGYVSIKA-- 646 + I G R + +++ P+ T S +NA+NGIEP + + Sbjct: 862 YMQRIAEVEPELVAQLAEKGGRFTHHTSIAPTGTISLSLANNASNGIEPSFSHHYARNII 921 Query: 647 -----------------------SKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVG 683 S G + + L D + ++ ++ + Sbjct: 922 REGRKTKEKVDVFSFELLAYRHLSNPGAMPFSDDADKKLPDYFTTSDDV-TPAQHVDIQA 980 Query: 684 IMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRD 736 Q +ID SIS N P + L A+ G+K T + N Sbjct: 981 AAQLWIDSSISKTANVPT------DFPYKNFKDIYLYAFDKGLKGCTTFRFNAEA 1029 >UniRef50_C7LZ05 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ05_ACIFD Length = 1331 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 102/334 (30%), Gaps = 57/334 (17%) Query: 136 DHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYIL-----VAACLFSNY--PRET 188 D + +T+S A L KY + T E S + + VA Y + Sbjct: 47 DVEVPVTWSQNATNILAQKYFRGHLGTPEREGSLRQVVDRIVNRIVAWGEADGYFADDDE 106 Query: 189 RLQYVKRFYDAVSTFKISLPTPIMSGVRTPT--RQFSSCVLIECGDSLDSINATSSAIVK 246 R + + + + +P+ + +Q S+C ++ D+++SI Sbjct: 107 RDAFADELRWLLVHQRAAFNSPVWFNIGVEGVPQQASACFILSVDDTMESILNWYHEEGI 166 Query: 247 YVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLF 305 +G G+N IR+ P+ G +G + F + + + GG R A + Sbjct: 167 IFKGGSGAGVNLSTIRSSVEPLAG-GGTASGPVSFMRGADASAGTIKSGGKTRRAAKMVI 225 Query: 306 YPMWHLEVESLLVLKNNRGVEGNRV-------------------RHMDYGVQINKLMYTR 346 + H +VE + K + + ++ + V++ Sbjct: 226 LNVDHPDVEEFVWTKAIEERKARVLAEAGFDMGVDGKDAFSIQYQNANNSVRVTDEFMQA 285 Query: 347 LLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQER 406 +++ + L + V+A +LF + + Sbjct: 286 VVEDREWEL--------------------------RAVTTGEVTKTVRARDLFHQIAEAA 319 Query: 407 ASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCL 440 +Q N P + SN C Sbjct: 320 WECADPGLQFDTTINRWHT-TPNAGRINGSNPCF 352 Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats. Identities = 67/344 (19%), Positives = 111/344 (32%), Gaps = 57/344 (16%) Query: 458 EIALCTLSAFNLGAI------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRR 511 + + C L++ NL A +++ A + + A D L DYP P + R Sbjct: 758 DNSSCNLASINLLAYLDEDGNFDVEGFRHTARVLITAQDILAGNADYPTPRIAETSRAYR 817 Query: 512 TLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWF--- 568 LG+G N L G Y + + S ELA+ G + Sbjct: 818 QLGLGYANLGAMLMALGLPYDSDGGRAYAAAVTALMTGAAYERSAELAERLGPFAGYADD 877 Query: 569 NETTYAKGILPIDTYKK--DLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSS 626 E+ + D K E W+ G+RN+ S L P+ T Sbjct: 878 AESMLRVLGMHRDALAKVDGAPEAIVEAARASWDMAIARASEVGVRNAQASLLAPTGTIG 937 Query: 627 QISNA-TNGIEPPRGYVSIKASKDGILRQVVP-----------DYEHLHD---AYELLWE 671 + + T GIEP V K G ++V EH D AY + Sbjct: 938 FLMDCDTTGIEPDFSLVKYKTLVGGGTMKIVNQTVPRALRTLGYPEHEIDQITAYLAEHD 997 Query: 672 M-----------------------PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGK 708 G+L ++G +Q F+ +IS N + Sbjct: 998 SIVGAPGLKPEHEAVFACAVGEYPISPTGHLAMMGAVQPFLSGAISKTVNLPSTS----- 1052 Query: 709 VPMQQLLKDLLTAYKFGVKTL--YYQNTRDGAEDAQDDLVPSIQ 750 ++ + + L A++ G+K + Y ++ G + S Sbjct: 1053 -TVEDVEQTYLDAWRLGIKAVALYRDGSKVGQPLSTTHEEDSEA 1095 >UniRef50_Q91TP4 T45 n=1 Tax=Tupaiid herpesvirus 1 RepID=Q91TP4_TUHV1 Length = 1035 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 84/518 (16%), Positives = 175/518 (33%), Gaps = 60/518 (11%) Query: 165 IYESAQFLYILVAACLFSNYPR-------------ETRLQYVKRFYDAVSTFKISLPTPI 211 E + + VA L + + +++ D + + ++ Sbjct: 431 REECPLAVAVRVALALAVRSTEVCYGGSYLKVLAMDETQEVFEQYLDDLYSERLLGSVNA 490 Query: 212 MSGVRTPTRQFSSCVLIECGD-SLDSINA-TSSAIVKYVSQRAGIGINAGRIRALGSPIR 269 ++ D ++ + ++ + + +N R G + Sbjct: 491 LAQAGLNESAPQEGFSGRIDDQDVEVWLDENAQRLLGMMKDGLALSLNVT--RGYGHAVD 548 Query: 270 GGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNR 329 + C R +++ +WH + ++L L Sbjct: 549 -----------VIYLLAAQARLCRSRQRRATFVRVYFDLWHTQAAAILELIERSASG--- 594 Query: 330 VRHMDYGVQINKLMYTRLLKGED-ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSI 388 + +++ V + L + R + T+F L + EF +Y + E++ Sbjct: 595 LDGVEFAVNVPNLFFERERHAKSHWTMFPYEHCAELNE---RTGAEFATVYVQKERNRCG 651 Query: 389 RKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFD------PAIAP-VRQSNLCLE 441 V L++ +++ TGR+ + D+ + P P + P V N+C+E Sbjct: 652 --WSVSLGWLYARLVR-AVLTGRLAVVFPDNVGVYGPLLGTMQNVPTLGPHVDMLNVCVE 708 Query: 442 IALPTKPLNDVNDEN-------GEIALCTLSAFNLGAINNLDELEELAILAVRALDALLD 494 +P N D+ G ++ L + G +L L AV A D LL+ Sbjct: 709 RHVPVVRFNVNVDDCYEENVPDGRVSEMDLYIVSSGLAISLCHFRRLVRAAVVAGDLLLE 768 Query: 495 YQDYPI--PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLL 552 + + P R L +G L + G Y A + + E + Y L Sbjct: 769 -EIFEQQGPQLGVAFQRYRPLCVGYSGLHTLLLRVGVEYDSDEAVTVAERLAEHLYYEAL 827 Query: 553 KASNELA-KEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGL 611 + S +L AC WF T Y++G+ + + + ++ W+ALRE + G+ Sbjct: 828 RTSVDLCIAGLPACSWFGHTRYSRGLFAFERHGRRPCSVPERL----WDALREDMSAFGM 883 Query: 612 RNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD 649 RN+ L +L P ++++ + P + + Sbjct: 884 RNAQLVSLGPGWEQARLAGVSASFYPLPHRAFREPCRF 921 >UniRef50_P50641 Ribonucleoside-diphosphate reductase large subunit-like protein U28 n=2 Tax=Human herpesvirus 7 RepID=RIR1_HHV7J Length = 806 Score = 233 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 108/658 (16%), Positives = 209/658 (31%), Gaps = 73/658 (11%) Query: 42 ELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPA 101 + + G+ + + II A + DAP L + + + +F+ + Sbjct: 48 ISKILRRLNSGLDMWCLRDAIISALGAM--HDAPHVDRLLGQFYLKT---NSASEFDSIS 102 Query: 102 LYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFS--YAAVKQLEGKYLVQN 159 L +++ + ++ E +++ H FS A + + + Sbjct: 103 LILESENILQKELIE---FVRDSKVELEKILQAAIHVWRAKFSPGVLAASRFLDEI---S 156 Query: 160 RVTGEIYESAQFLYILVAACLFSNYPRETRLQ---------YVKRFYDAVSTFKISLPTP 210 I E+ +++ ++ L S + LQ V+ + LP P Sbjct: 157 NSFNGIEENIPTIFLRISVTLASQIKKIEYLQKSFVSHKCPLVEEILILLYKRVCMLPFP 216 Query: 211 IMSGVRT---PTRQFSSCVLIECGDSLDSINATSSAIV-KYVSQRAGIGINAGRIRALGS 266 MS + F + SL+ +S + + + +N R Sbjct: 217 CMSNLGLVSEKKSVFDTVFHNVSNFSLEDFLDINSGFFLPAMLNGSYVSVNLTRYHYEAE 276 Query: 267 PIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVE 326 + + ++ + + T++ +WHL + L Sbjct: 277 -------------SLMELLLSQLQIVEKDTNKTTGLTIYLEIWHLSLLMWLDFCEILPT- 322 Query: 327 GNRVRHMDYGVQINKLMYTRLL-KGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKD 385 + + + + ++ RL + ++F + L D+ +F Y + E+ Sbjct: 323 ---TVQVKFCLILPEIFMERLKTENSYWSVFHKALAINLG---LYDESDFTSKYLECERT 376 Query: 386 DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPV------------ 433 R+K L + + G++ + + +S P IA Sbjct: 377 A--EHARIKTETLLDNICRCLRR-GQMGFIFRKNIHKYSML-PQIASYCLGNSMDVIPFE 432 Query: 434 RQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNL-GAINNLDELEELAILAVRALDAL 492 N IAL + E + + F+ I NL ++ + V +A+ Sbjct: 433 YGLNTAFRIALNLSYFVENVSEEQKSHT-NIDMFHYRDKIFNLKKMRKTVTELVLIGNAV 491 Query: 493 LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLL 552 +DY G + R+L I V L ++ L E I Y + Sbjct: 492 IDYALENRDFLMDGIVNARSLAICVTGLHSALMSMNLPFNSQLGCQLYRIVCENIYYSSV 551 Query: 553 KASNELAKEQG--ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHG 610 + S K +G C +F + YA+GIL D Y T+ N W LR IK +G Sbjct: 552 RTSMNCCK-KGAEPCSFFQRSKYAQGILHCDLYDNVEYTLPNVL----WTNLRSDIKKYG 606 Query: 611 LRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYEL 668 LRN T + + N + P G +K S + P + Y Sbjct: 607 LRNLTFVSGSAMSKEFDLLNCSQSFCPIEGNKILKRSSI-KVLHPNPVFHSDLSVYST 663 >UniRef50_B3UXH6 Ribonucleotide reductase n=7 Tax=Murid herpesvirus 1 RepID=B3UXH6_MUHV1 Length = 1180 Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 91/547 (16%), Positives = 181/547 (33%), Gaps = 60/547 (10%) Query: 151 LEGKYLVQNRVTGE---IYESAQFLYILVAACLF-------------SNYPRETRLQYVK 194 L ++ +R E+ +++ VAA L + Q Sbjct: 521 LYSTVVMMDRCGNSFQGREETPISVFVRVAAALAVECEVDGGASYKILSSKPVDAAQAFD 580 Query: 195 RFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRA-- 252 F A+ +F I +++ R I S ++ S + Sbjct: 581 AFLSALCSFAIIPSPRVLAYARFGGSNP--------------IFDAVSYRAQFYSAESTI 626 Query: 253 -GIGINAGRIRALGSPIRGGEAFHTG-CIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWH 310 G + + G + A G + K+ +++ +W Sbjct: 627 NGTLHDICDMVTNGLSVSVSAADLGGDIVASLHILGQQCKALRPYARFKTVLRIYFDIWS 686 Query: 311 LEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLK---GEDITLFSPSDVPGLYDA 367 ++ + + G E + + + V ++ + R L + +F+ + L Sbjct: 687 VDALKIFSFILDVGREYEGL--ISFAVNTPRIFWDRYLDSSGDKMWLMFARREAAALCGL 744 Query: 368 FFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQ-----ERASTGRIYIQNV----- 417 D + F +Y K E+D + + Q R +T ++ NV Sbjct: 745 ---DLKSFRNVYEKMERDGRSAITVSP----WWAVCQLDACVARGNTAVVFPHNVKSMIP 797 Query: 418 DHCNTHSPFDPAIAPVRQSNL-CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLD 476 ++ + P ++ V + C I L + E + LG + Sbjct: 798 ENIGRPAVCGPGVSVVSGGFVGCTPIHELCINLENCVLEGAAVESSVDVVLGLGCRFSFK 857 Query: 477 ELEELAILAVRALDALLDYQ-DYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGS 535 LE L AV + L+D A + R L IGV+ F + + G++++D Sbjct: 858 ALESLVRDAVVLGNLLIDMTVRTNAYGAGKLLTLYRDLHIGVVGFHAVVNRLGQKFADME 917 Query: 536 ANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNETTYAKGILPIDTYKKDLDTIANEP 594 + +L + E I Y ++AS +L P F ++ YA G D + D Sbjct: 918 SYDLNQRIAEFIYYTAVRASVDLCMAGADPFPKFPKSLYAAGRFYPDLFDDDERG-PRRM 976 Query: 595 LHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQ 654 E LRE + HG+RN++ ++ ++ ++ T G P R V ++ + + Sbjct: 977 TKEFLEKLREDVVKHGIRNASFITGCSADEAANLAGTTPGFWPRRDNVFLEQTPLMMTPT 1036 Query: 655 VVPDYEH 661 + Sbjct: 1037 KDQMLDE 1043 >UniRef50_D0MFS7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFS7_RHOM4 Length = 1354 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 113/353 (32%), Gaps = 66/353 (18%) Query: 458 EIALCTLSAFNLGAI------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRR 511 + + C L++ NL +++ + + A++ L+D YP + + R Sbjct: 759 DNSACNLASLNLRKFQREDGSFDVERFRAAVRIFITAMEILVDNAGYPSEKIAQNSHDYR 818 Query: 512 TLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELA--KEQGACPWFN 569 LG+G N L G Y + + S E+A + G P F Sbjct: 819 PLGLGFANLGAMLMAMGLPYDSDEGRAVAGAITAIMHAEAYARSAEIAAIEHIGPFPGFE 878 Query: 570 ETTYAKGILPIDTYKKDLD------TIANEPLHYDWEALRESIKTHGLRNSTLSALMPSE 623 + + D E + + +G RN+ + L P+ Sbjct: 879 KNREPMLEVMRMHQAAVEDIHLSCPAYLKEAARESMARMVALGERYGYRNAQATVLAPTG 938 Query: 624 TSSQISNA-TNGIEPPRGYVSIKASK---DGILRQVVPDY-------------------- 659 T S + + T GIEP V K DG+ + V Sbjct: 939 TISFMMDCDTTGIEPDIALVKYKLLAGKGDGMFKIVNNTVPIALRRLGYSEEQIKDILAY 998 Query: 660 ----------EHLHDAYELLWE----------MPGNDGYLQLVGIMQKFIDQSISANTNY 699 HL + + +++ G+++++ Q FI +IS N Sbjct: 999 IEENDTIEGAPHLKEEHLPVFDCAFKPYKGQRFIHYMGHIKMMAACQPFISGAISKTVNM 1058 Query: 700 DPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQ 750 V +++++ + +K G+K +Y +N++ + + Sbjct: 1059 PE------HVTVEEIMDAYIQGWKLGLKALAIYRENSKRSQPLSTRKEDKKGE 1105 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 107/370 (28%), Gaps = 54/370 (14%) Query: 116 DNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQN-------RVTGEIYES 168 + + + D + T+S A + KY + G+ S Sbjct: 38 WERRTAAIYNSKGEAVFEQKDVEFPSTWSQLATNVVASKYFYGDLAAGNGDPREGKREYS 97 Query: 169 AQFLYILVAACLFSNYPRETRL---QYVKRFYDAVS----TFKISLPTPIMSGVRT---- 217 + L V + + + +RFYD ++ + +P+ V Sbjct: 98 LKQLIHRVTRTIADWGKAQGYFATPEDAERFYDELTWLCLHQYGAFNSPVWFNVGLYHQY 157 Query: 218 --------------------------PTRQFSSCVLIECGDSLDSINATSSAIVKYVSQR 251 Q S+C +I DS+D I + + Sbjct: 158 GVRDTGSKTIYGWDFEKQRVVPVDPYERPQASACFIISVEDSIDDIWQLMAESARLFKFG 217 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGV-RGGAATLFYPMWH 310 +G+G + ++R+ + G +G + F + + GG R A +WH Sbjct: 218 SGVGADWSKLRSTKEKLSG-GGRPSGPVSFMRVQDATGATIKSGGKTRRAAIMQTLKVWH 276 Query: 311 LEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFA 370 ++ + K + + Y N Y+ + + + + D F Sbjct: 277 PDIMEFVTAKAKEEKKAWALIEQGYDGSFNGEAYSSV------AFQNVNQSVRVTDEFME 330 Query: 371 DQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAI 430 + K + + + A EL + + G +Q D Sbjct: 331 AVLARRKFPLKAVTTGKVI-EEIDAYELLYKVAEGTWICGDPGLQYEDTIQRWHTCK-NS 388 Query: 431 APVRQSNLCL 440 P+ SN C+ Sbjct: 389 GPINSSNPCV 398 >UniRef50_Q9RRW1 Ribonucleoside-diphosphate reductase n=1 Tax=Deinococcus radiodurans RepID=Q9RRW1_DEIRA Length = 1418 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 64/375 (17%), Positives = 112/375 (29%), Gaps = 99/375 (26%) Query: 440 LEIALPTKPLNDVNDENGEIAL-----CTLSAFNLGAI-----NNLDELEELAILAVRAL 489 +E + GEI L C L A NL A + VR L Sbjct: 875 VEQVHAFDANGVLAHNCGEIPLTVGEPCDLGAINLAAYVRGSDFDFAAFRADVRTCVRFL 934 Query: 490 DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY 549 D +LD + + + + R LG+GV+ A L K G RY + S + A++ Sbjct: 935 DDVLDVNVFALEDNRVASQDLRRLGLGVMGLADALIKMGLRYDNESGRQAIYDIMSALRE 994 Query: 550 YLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH 609 + S L +E+G P + RE + Sbjct: 995 EAVAESERLGQERGFYPVYERN-------------------------------REQVPHD 1023 Query: 610 GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKD-------------------- 649 RN + + P+ T+S + ++GIEP + Sbjct: 1024 PRRNVAVLTVAPTGTTSMLMGVSSGIEPVFSPFIWRKIGSEYRALLAPLFVELLESYPAP 1083 Query: 650 ----------------------GILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQK 687 G + + + L + ++ D ++++ G +Q+ Sbjct: 1084 KGMEKDGGWDWDKVTEAVSENHGSVVGLSFIPDALQQVFVCAHDISPVD-HVRMQGTVQR 1142 Query: 688 FID-------QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGA 738 D S+S N S + + AY+ G K T+Y +R Sbjct: 1143 AFDDGGQLAANSLSKTINLPNS------ASVDDVKSAYEEAYRTGCKGITVYRDGSRQFQ 1196 Query: 739 EDAQDDLVPSIQDDG 753 + ++ G Sbjct: 1197 VLSTSKKKAKTEERG 1211 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 79/248 (31%), Gaps = 35/248 (14%) Query: 227 LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF-YKHF 285 + D + I + + + I+ +R G+PI+G +G + F + F Sbjct: 280 VTAVADDMGGIIDAARQVAEIAKLNIEPRIDLSAMRPEGAPIKGSGGTSSGPVSFLMEIF 339 Query: 286 QT------------------------AVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK- 320 ++ QGG R GA + H +V L K Sbjct: 340 DNFIEWANRGAEDSGPINTLRYVYAPVLRVVRQGGTRRGAGMATISIGHPDVLDFLTAKD 399 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEE---FER 377 +R + + + ++ + L T DVPG Y + E F Sbjct: 400 LDREAAEGDISTFNISILVDTKFWDTLQADGVWT-IDAQDVPGKYFPVPQEGEYAGTFPE 458 Query: 378 LYTKYEKDDSIRKQR---VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP--AIAP 432 L T+ E + A L+ + Q STG + D N +S Sbjct: 459 LPTRAEDGAKGVPVYGSGIPARWLWDQIAQHAWSTGEPGLIFNDRVNEYSALKNLGERYE 518 Query: 433 VRQSNLCL 440 +R +N C+ Sbjct: 519 IRSTNPCV 526 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 50/180 (27%), Gaps = 36/180 (20%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVST 202 F A + +YL N ++ +A + E R + +++YD ++ Sbjct: 80 FDENAQHIAKRQYLQGNDGD------ISGMFWRIADWVAGAEAPEARQGWAQQYYDLMAE 133 Query: 203 FKISLPTPIMSGVRTPTRQFSSCVLIEC----GDSLDSINATSSAIVKYVSQRAGIGINA 258 K +++G T +C + S + + + + G G+N Sbjct: 134 KKFCPGGRVLAGAGTQHGNVLNCFVQGATEHDPSSFEGVMEVAKKLALVTKVGGGNGVNL 193 Query: 259 GRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLV 318 R R G ++ H +V+ + Sbjct: 194 DVYRPRAQSSRSDNGV------------------------RG--WVYMSAEHADVQDFIE 227 >UniRef50_P52343 Ribonucleoside-diphosphate reductase large subunit-like protein U28 n=5 Tax=Human herpesvirus 6 RepID=RIR1_HHV6U Length = 804 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 114/738 (15%), Positives = 229/738 (31%), Gaps = 89/738 (12%) Query: 37 SISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQ 96 + + + G+ + + II + P + R + + Sbjct: 42 ERVRDIAKIIDRLDSGLDAWCLRDAIISVL--RATHCVPRVDRMLGRWYLKT---SVFYD 96 Query: 97 FEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYL 156 F P L ++ + + + + + Y ++L Sbjct: 97 FCPDDLILSCPNVIMPNVLN---FVKKYRDFIRSVLYKVSVSWKNQ--YMPGVLAASRFL 151 Query: 157 VQ-NRVTGEIYESAQFLYILVAACLFSN----------YPRETRLQYVKRFYDAVSTFKI 205 + + + ES +Y+ + A L Y + + + + + + Sbjct: 152 EEISNSLNGVEESIPCIYLRMCATLTEIVLRIGYLREIYQENPYVMFEELAFSLFTQKWV 211 Query: 206 SLPTPIMSGVRTPTRQFSSCVLIEC-GDSLDSINATS----SAIVKYVSQRAGIGINAGR 260 + M+ + + S+ + L S+ + + + + I +N R Sbjct: 212 LPFS-CMTNLGLVEKANSTVFDVAIYNTCLYSLVDFTIVNGEHLFPALLNGSNISMNLTR 270 Query: 261 IRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLK 320 + I ++ + ++ + + T++ +WH+ L L Sbjct: 271 YQQEAKNI-------------FEILLSQIRVVERDTDKTVQLTVYVEVWHVSALMWLDLY 317 Query: 321 NNRGVEGNRVRHMDYGVQINKLMYTRLL-KGEDITLFSPSDVPGLYDAFFADQEEFERLY 379 + +RV + + I + R K +LF + L D+ F Y Sbjct: 318 -EALPQTSRVT---FCLIIPGIFMDRYELKRAQWSLFHKNIAFELGKC---DEITFSTKY 370 Query: 380 TKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP-----------FDP 428 ++E+ K + + + GR+ + + +S F Sbjct: 371 LEFERTTDHAKITMSS--FIEKICLCL-KGGRMGLIFRKNVYQYSMIPHVPLYCGGDFLD 427 Query: 429 AIAPVRQSNLCLEIALPTKPL--NDVNDENGEIALCTLSAFNLGAINNLDELEELAILAV 486 + N C+ + L ++V+DE E +EL + V Sbjct: 428 VLPVRDGINTCMRMLLNVVHFLGDEVSDELTEEIDFVRLQC---KFFMFNELRRVVRKMV 484 Query: 487 RALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEA 546 +A++DY G R+LGI V G Y+ A L E Sbjct: 485 LVANAVIDYAVENKDFLCEGIEDGRSLGICVTGLHSVFMTVGLSYAHPDARRLYRMICEH 544 Query: 547 IQYYLLKASNELAKEQGACP--WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRE 604 I Y ++ S + +GA P F+ + YA G+L D + T+ E W LR+ Sbjct: 545 IYYTCVRTSVDCCM-KGAEPCNLFDRSKYALGMLYFDHFDNVECTLPEEL----WTTLRK 599 Query: 605 SIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS-------KDGILRQVVP 657 + HG+RN +A + I N++ P ++ S KDG+ Sbjct: 600 DVLMHGVRNIHFTAGTAMQKEFDIINSSESFWPMEDNKILRRSNIKVVIGKDGLNDVTSV 659 Query: 658 DYEHLHDAYELLW------EMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPM 711 L Y ++ + YL+ VG +D ++ + D Sbjct: 660 YSSELKSLYIPVYNNLLLNRFNKHQQYLKTVGYRVLNVDTNLFTDKELDDLAVFKDG--F 717 Query: 712 QQLLKDLLTAYKFGVKTL 729 L DL+ YK G+ L Sbjct: 718 SYHLNDLIEMYKSGLPFL 735 >UniRef50_P16782 Ribonucleoside-diphosphate reductase large subunit-like protein UL45 n=18 Tax=Cytomegalovirus RepID=RIR1_HCMVA Length = 906 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 131/704 (18%), Positives = 233/704 (33%), Gaps = 115/704 (16%) Query: 97 FEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDH-DRDMTFSYAAVKQLEGKY 155 F+ + + + + + + + + + R + A L Sbjct: 244 FKANWARESRTPLCYASELCDESVRRFVLRHMEDLPKLAEETARFVEL--AGCWGLYAAI 301 Query: 156 LVQNRVTGEI---YESAQFLYILVAACLFSNYPRET-----RLQYVKRFY-DAVST---- 202 L ++V ++ ES +++ +A L + R RF + + + Sbjct: 302 LCLDKVCRQLHGQDESPGGVFLRIAVALTAAIENSRHSRIYRFHLDARFEGEVLESVLKR 361 Query: 203 ---FKISLPTPIMSGVRTPT-RQFSSCVLIECGD-SLDSINATSSAIVKYVSQRAGIGIN 257 ++SL T MS V Q+ LI S D+ A + +S + +N Sbjct: 362 CRDGQLSLSTFTMSTVGFDRVPQYD--FLISADPFSRDASWAAMCKWMSTLSCGVSVSVN 419 Query: 258 AGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWH---LEVE 314 R+ A + + V +F MW + V Sbjct: 420 VTRLNAD-------------VNSVIRCLGGYCDLIREKEVHRPVVRVFVDMWDVAAIRVI 466 Query: 315 SLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGED-ITLFSPSDVPGLYDAFFADQE 373 + + LK + + + ++ R E +LF L D + Sbjct: 467 NFI-LKESTSELTGVCYAFN----VPSVLMKRYRAREQRYSLFGRPVSRRLSD--LGQES 519 Query: 374 EFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPV 433 FE+ Y++ E+ S K V + M+ GR + V H +S ++ Sbjct: 520 AFEKEYSRCEQ--SCPKVVVNTDDFLKKMLLCALK-GRASVVFVHHVVKYSIMADSV--- 573 Query: 434 RQSNLCLEIALPTKPLNDVNDE----NGEIALCT----------LSAFNLG---AINNLD 476 CL + + + + +A C L LG +L Sbjct: 574 -CLPPCLSPDMASCHFGECDMPVQRLTVNVARCVFARSDEQKLHLPDVVLGNTRRYFDLS 632 Query: 477 ELEELAILAVR----ALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYS 532 L EL AV LDAL+ ++ + +A R L IGV L + G Y Sbjct: 633 VLRELVTEAVVWGNARLDALMSASEWWVESA---LEKLRPLHIGVAGLHTALMRLGFTYF 689 Query: 533 DGSANNLTHKTFEAIQYYLLKASNELAKE-QGACPWFNETTYAKGILPIDTYKKDLDTIA 591 ++ +L + FE + + ++AS +L K C WF T Y +G + Y+ +IA Sbjct: 690 --ASWDLIERIFEHMYFAAVRASVDLCKSGLPRCEWFERTIYQEGKFIFELYRLPRLSIA 747 Query: 592 NEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGI 651 + WEALR + GLRN A+ P + + + T + RG V + + + Sbjct: 748 S----ARWEALRADMLEFGLRNCQFLAVGPDDEVAHLWGVTPSVWASRGTVFEEETVWSL 803 Query: 652 ----------------LRQVVPDYEHLHDAYE-------LLWEMPGNDGYLQLVGI-MQK 687 LR V +Y L E L P +++ + + Sbjct: 804 CPPNRECYFPTVVRRPLRVPVVNYAWLEQHQEEGKATQCLFQAAPAIQNDVEMAAVNLSV 863 Query: 688 FIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYY 731 F+DQ ++ YD + LL +L Y + K Y Sbjct: 864 FVDQCVALVFYYD------SGMTPDVLLARMLKWYHWRFKVGVY 901 >UniRef50_B7TPW4 GP45 n=1 Tax=Caviid herpesvirus 2 RepID=B7TPW4_9BETA Length = 929 Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats. Identities = 98/636 (15%), Positives = 187/636 (29%), Gaps = 112/636 (17%) Query: 169 AQFLYILVAACLFSNYPRETRLQYVKR----FYDAVSTFKISLPTPIMSGVRTPTRQFSS 224 + ++A+ Y Q+V+ F + + ++ LP + G+ + F Sbjct: 314 IRATCAMMASQHMDVYTSCMDTQHVRDIMYLFLERLCLRRLCLPNYSLFGLGLRDQFFVG 373 Query: 225 -----CVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCI 279 C LD ++ ++ + + IN R G P+ + Sbjct: 374 GFSCRCAEQTVSSYLD---KNVQEMLLFMRKGTAVSINVT--RGAGDPLLKIAHMAS--- 425 Query: 280 PFYKHFQTAVKSCSQGGVRGGAATLFYPMW--HLE-VESLLVLKNNRGVEGNRVRHMDYG 336 ++ +++ W H + + ++ + +G Sbjct: 426 --------QLQIIRTTQRVRSRLRIYFDSWSWHATGILDYI-----LSLDEEVFSGLSFG 472 Query: 337 VQINKLMYTRLLKGED--ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVK 394 + + ++ + L++ RL D+ R V Sbjct: 473 INVVSALFDAISPNGSGTWALWNFDWCSSFSKENMDQFV--SRLKRARPAADNERCIVVS 530 Query: 395 AVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQS-------NLCLEIALPTK 447 A + Q TGR+ + ++ + HS + P++ N LP Sbjct: 531 ARWFCEKIAQCVL-TGRLAVVYPENVHNHSVLNDLYQPIQCLGPGVNFENPFSRETLPVV 589 Query: 448 PLNDVNDENGEIALCTLSAFNLGAIN--------NLDELEELAILAVR----ALDALLDY 495 ++ +E + N + L L AV LD+++ Sbjct: 590 SVSVNLEECVADVVPDCMHDNEMMYIYASSDWAIDSAHLRMLVEHAVVCGNAMLDSMIKN 649 Query: 496 QDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKAS 555 L + V F L K Y A L K E + Y LK S Sbjct: 650 CGGESSKLAERFRRFAALAVNVTGFHKALMKLDVEYDSNEAVELCRKIHEHVYYEALKTS 709 Query: 556 NELAKEQG-ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNS 614 L + AC WF T YA+GI+ D Y ++ W LR++I HGLRN+ Sbjct: 710 MSLCRAGASACTWFGRTMYARGIMMFDRYSVTPTSVP----TKHWIVLRQNIMRHGLRNA 765 Query: 615 TLS-ALMPSETSSQISNATNGIEPPRGYVS------------------------------ 643 ++ P + ++ + I P Sbjct: 766 FITSCQDPEDGVCLMTEGSVSILPILKNHYISHALIPRVEGFREEGFCHIDRRAGEDVPF 825 Query: 644 --IKASKDGILRQVVPDYEHLHD----------AYELLWEMPGNDGYLQLVGIMQKFIDQ 691 I + ++R+ + D + +++ D L + F+DQ Sbjct: 826 VGIPVVNNLLIREEPRVQMAVSDRKWGVSDRTCIFRDAFDIGM-DRVLAMCAAASPFVDQ 884 Query: 692 SISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK 727 + PS + +L+ L AY +K Sbjct: 885 VV------APSFCVQDGDGVGAILEALKRAYDLRLK 914 >UniRef50_Q39UD5 Ribonucleotide reductase large subunit n=3 Tax=cellular organisms RepID=Q39UD5_GEOMG Length = 279 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 109/275 (39%), Gaps = 20/275 (7%) Query: 473 NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYS 532 + L E AVR LD +D YP+PA + G R +G+GV+ +A L + G Y+ Sbjct: 10 IDFPSLAEDIKTAVRFLDDTIDANIYPLPAIELMHKGNRKIGLGVMGWADLLLRLGLPYN 69 Query: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILP--IDTYKKDLDTI 590 + L + ++ KAS ELA+E+G P F + Y P + + Sbjct: 70 HPQSFALARSLMKFVRDTSRKASAELAEERGVFPNFAGSVYDAPDRPRVRNATTTTIAPT 129 Query: 591 ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVS----IKA 646 D + E + + + L ++I+ + RG S K Sbjct: 130 GTLATIADCSSGIEPLFALAYKRNVLGT-----ELTEINGYFLNVAKERGLFSDELMQKV 184 Query: 647 SKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPS 706 + G LR + + ++ E+P D ++++ Q++ D ++S N Sbjct: 185 MEQGNLRGITGIPADIRRLFKTALEIPAAD-HIEMQAAFQEYTDNAVSKTVNLP------ 237 Query: 707 GKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAE 739 + + K L AY+ GVK T++ ++ G Sbjct: 238 ARATRGDVAKAFLLAYEKGVKGITVFRYGSKKGTL 272 >UniRef50_C9DC34 Gp50 n=2 Tax=root RepID=C9DC34_9CAUD Length = 677 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 95/590 (16%), Positives = 164/590 (27%), Gaps = 136/590 (23%) Query: 228 IECGDSLDSINATSSAIVKYVSQRAGIG----INAGRIRALGSPIRGGEAFHTGCIPFYK 283 DS + A ++ + + R+R G+ ++ +G +P + Sbjct: 167 FVIEDSREGWAAALVDLIDTHYRDEVSHFQRVYDVSRVRPFGAKLKTFGGRASGPLPLAR 226 Query: 284 HFQTAVKSCSQ--------------------------GGVRGGAATLFYPMWHLEVESLL 317 + S+ GGVR A ++E + Sbjct: 227 MLIDVCEVLSEIATVGGSLNGIAAMEIDHAIAQCVVAGGVRRSARMSMMHWQDPQIEEFV 286 Query: 318 VLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFER 377 K G + V ++ L +T L Sbjct: 287 RCKQETGKHW----TTNISVVVDDLFWTALN----------------------------- 313 Query: 378 LYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAP--VRQ 435 + R +A + + + + G D S P V Sbjct: 314 -----MPNQVSIMVRDQAHKALTWITDGMVANGEPG--FWD-----SSLSSQGEPNEVVC 361 Query: 436 SNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN------NLDELEELAILAVRAL 489 +N C EI L E C L NL A + +L L R L Sbjct: 362 TNPCGEITLQ------------EWEPCNLGHINLAAFVKDNGKVDTIDLIRSHRLMARFL 409 Query: 490 DALLDYQDYPI--PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYS----DGSANNLTHKT 543 + P+ P ++ R +G+G + A YLA G+RYS D + Sbjct: 410 ---IRATFSPVGDPKSREVLDRNRRIGVGHLGVASYLAMTGRRYSKAPLDKHFRKTLREL 466 Query: 544 FEAIQYYLLKASNEL-----AKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYD 598 + ++ + S+EL K + P T + + Sbjct: 467 AKEVEQSAQQFSHELRIPVPVKTRTVAPT--GTIAKMPGVSEGIHPIFAKYFNRRIRFSK 524 Query: 599 WEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPD 658 +A E + G + V +KD ++++VV Sbjct: 525 GDAELEKLIDQGY------------------DFEPCQYAQNTVVVTIPTKDTLVQEVVDR 566 Query: 659 YEHLHDAYELLWEMPGNDGYLQLVGIMQK-FIDQSISANTNYDPSRFPSGKV-----PMQ 712 + + E + L + Q + D ++S N DP R+ V Sbjct: 567 FGRDAEEIVESAEDLTLNQLLAFQAMYQMLWADNAVSFTANVDPDRYKPHVVGEQLRTFG 626 Query: 713 QLLKDLLTAYKFGVKTLYYQN-TRDGAEDAQDDLVPSIQDDGCESGACKI 761 LLK + + Y+ T+ + A V D+ C SGAC I Sbjct: 627 GLLKGATIFPESSMPQAPYERITKKQYKAATTKAVADSVDEECASGACPI 676 >UniRef50_O55716 IIV-6 RIR1 intein n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR1_IIV6 Length = 959 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 69/342 (20%), Positives = 119/342 (34%), Gaps = 62/342 (18%) Query: 132 DTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQ 191 D ID RD F +K+L Y+++ S Q + V + T Sbjct: 3 DIIIDLSRDSKFDELGLKRLRESYMMREET------SPQERFAYVCKQV------GTDRD 50 Query: 192 YVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQR 251 + +R Y+ S +SL TPI+S + SC L D+ + + T S + + Sbjct: 51 HSQRLYEYTSKHWLSLSTPILSFGKANHGLPISCYLSWIEDTKEGLIDTLSEVNQLSM-- 108 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 G +G IR + TG + + + Q GVR G+ ++ H Sbjct: 109 ------LGGGVGVGVGIRTSDNKSTGVMSHLNTYDACSLAYKQDGVRRGSYAMYLNNNHP 162 Query: 312 EVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLK-------GEDITLFSPSDVPGL 364 +V + ++ G R ++ +G+ I+ + K + L P Sbjct: 163 DVLQFIEMRKPTGDHNIRCLNLHHGLNISDEFMELIEKCDGGGNIDDTWNLIDPHT---- 218 Query: 365 YDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHS 424 + V A +L+ +++ R TG YI +D CN H Sbjct: 219 -----------------------KKITTVGARDLWQRILETRMKTGEPYICFIDTCNKHM 255 Query: 425 P--FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTL 464 ++QSNLC P + E+G+ + L Sbjct: 256 YDFQKKKGLTIKQSNLC------VAPETMILTEDGQFPIKDL 291 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 68/369 (18%), Positives = 116/369 (31%), Gaps = 99/369 (26%) Query: 415 QNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINN 474 + N F+ + + C EI LPT ++ A+C LS+ NL + Sbjct: 592 CFTEPINHAGVFNGIL-----TGQCSEIILPT--------DSTRTAVCCLSSLNLEYYDE 638 Query: 475 LDELEELAILAVRALDAL----LDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530 + + + LD ++ I A A R++GIGV+ F +L + Sbjct: 639 WKDNDLFIKDVMEMLDNALTIFIEKAPPTISRAVNSAKKERSIGIGVLGFHSFLQQKNIS 698 Query: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTI 590 + A L F ++ IDT+ L ++ Sbjct: 699 FESDEAAKLNIDIFTKLRS-----------------------------KIDTFNLVLGSL 729 Query: 591 ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISN-ATNGIEPPRGYVSIKASKD 649 P E + G R A+ P+ TSS I + +EP R + + Sbjct: 730 RGSP---------EDAEGTGRRFCCTMAVAPTATSSIIMGNTSPSVEPFRANAYRQDTLS 780 Query: 650 GILRQVVPDYEHL------------------------------------HDAYELLWEMP 673 G + ++ +E+ Sbjct: 781 GSFLNKNRYLSRILSQRLNVKEINEVWSNIVSNGGSVQQLPNNLLSEQEKQVFKTAFEI- 839 Query: 674 GNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQN 733 ++ QK+IDQS S N P + ++L L A+K G+KTLYY Sbjct: 840 NQKWVIKHAADRQKYIDQSQSINLFLKP------DIHKRELHSLHLNAWKSGLKTLYYLR 893 Query: 734 TRDGAEDAQ 742 + A+ + Sbjct: 894 SEKIADADK 902 >UniRef50_C1TR30 Ribonucleoside-diphosphate reductase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TR30_9BACT Length = 994 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 60/342 (17%), Positives = 110/342 (32%), Gaps = 75/342 (21%) Query: 144 SYAAVKQLEGKYLV----QNRVTGEIYESAQFLYILVAACLFSNYP---RETRLQY---- 192 S A L+ +YL+ + S + V+ + S E L + Sbjct: 30 SENAAWLLDQRYLLSRYDRAEGKVRKEASFEEFARRVSRVIASVETLYVGEDDLNWIRVL 89 Query: 193 VKRFYDAVSTFKISLPTPIMSGVR--------------------------------TPTR 220 K + + + +P + G T ++ Sbjct: 90 EKNLFSDILNRRFLFNSPCLFGAGAGMTVDPAMSELIYRSPDDMSYSDYVAVRDGKTESQ 149 Query: 221 QFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIR-GGEAFHTGCI 279 Q +C +I DS++ I + G+G N G +R GS I+ G +G + Sbjct: 150 QLFACFVISVEDSIEGIFDSVKDAAVISKYGGGVGGNFGNLREFGSDIKGGTGGKASGPV 209 Query: 280 PFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQI 339 F + + T QGG R A H +VE + K VE ++ + + V + Sbjct: 210 SFMETWNTMGSVVVQGGRRRAALMGMLYDDHPDVERFMDAK----VEDGKLPYFNISVSV 265 Query: 340 NKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELF 399 + + T+ +G D L S + D + VKA +L+ Sbjct: 266 SDELLTKAAQGGDFHLRS--------------------------RADGSVAKTVKAADLW 299 Query: 400 SLMMQERASTGRIYIQNVDHCNTHSPFDPA-IAPVRQSNLCL 440 + + + G + D N + A + +N C+ Sbjct: 300 NKLCRNAWRRGDPGVFFGDRANVDNILKKAPQWRIESTNPCV 341 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 65/426 (15%), Positives = 119/426 (27%), Gaps = 100/426 (23%) Query: 400 SLMMQERASTGRIYIQNVDH--CNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENG 457 M G + +V N FD V C E LP Sbjct: 440 KAMFDSLVPCGEEAVFDVQVPGVNA---FDANGLYVHN---CGEQPLP------------ 481 Query: 458 EIALCTLSAFNLGAI----------NNLDELEELAILAVRALDALLDYQDYPIPAAKRGA 507 C L + NL A ++D + +V LD ++D YP+ Sbjct: 482 NYTSCNLGSVNLEAFVSSESSGEAVFDMDSFVDQVFRSVYYLDLVIDATSYPLERIADRT 541 Query: 508 MGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPW 567 R +G+G++ A G Y S N + L A+ + E+G P+ Sbjct: 542 KMIRPVGLGLMGLADAAIMLGISYGSESFNRFCRSLGGTMASAALAATVRIVSEEGKDPF 601 Query: 568 FNETTYAKGILPIDTYKKDLDTIANEPLHYD---WEALRESIKTH--------------- 609 ++ + D + D + L E ++ Sbjct: 602 PEHRLVSELMESFRCEAGLPDAVDRWLERMDEGGFRELLERMRRTDTVPYTLVNTLEALL 661 Query: 610 ------------------------GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIK 645 +RNS ++ P+ + S + +A+ GIEP + + Sbjct: 662 SAASVHKGDGMGLVREVLEALFSGRMRNSRRLSVAPTGSISMLLDASPGIEPNFAWSWSR 721 Query: 646 ASKDGILRQVVPDYEHLHDA-------------------YELLWEMPGNDGYLQLVGIMQ 686 E+ H + +++ D ++++ GI Sbjct: 722 KVMSSTGDGGYETREYFHRLMTAEHKDEFRRTGGISDPRFVTAYDIGT-DSHVEVTGIFA 780 Query: 687 KFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDD 744 +D IS N + + + + Y+ G K T+Y +R Sbjct: 781 AVVDSGISKTVNLP------SEATVDDVRRVYEDCYRMGCKGITIYRDGSRSDQPIEAKK 834 Query: 745 LVPSIQ 750 + Sbjct: 835 SDEPEK 840 >UniRef50_C9LEN5 Ribonucleoside-diphosphate reductase n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LEN5_9BACT Length = 775 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 79/533 (14%), Positives = 155/533 (29%), Gaps = 86/533 (16%) Query: 138 DRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFY 197 + + AA +++ + + + A L + + + Sbjct: 16 SKYYEGNEAAACHWIETCALKDASGNLLETTPEATLRRCAGALGRIEAKYPDPVSEEEIF 75 Query: 198 DAVS-TFKISLPTPIMSGVRTPTRQ--FSSCVLIECGD---SLDSINATSSAIVKYVSQR 251 D + +SL TP+++G+ P RQ S I G S + + V + + Sbjct: 76 DFLYPAHHVSLSTPMLAGLGNPHRQAPVSDAFTIGFGPKAYSYNDLLQADEEEVYLLRRG 135 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRG---GAATLFYPM 308 A +G + RI E + + + + Q R GA TL + Sbjct: 136 AALGHDLSRIYPAQLQTEQSEKATPDVVSALERYARS----RQEAARLTACGAITLSLSI 191 Query: 309 WHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF 368 H + E+ + G ++ + I+ + KGE P D Sbjct: 192 KHPDAEAFIDA----GARMRTTAGVNCCLLIDDDFMYAVAKGESYRQQFPVDAES----- 242 Query: 369 FADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDP 428 + + A L+ ++++ I D N Sbjct: 243 ------------------PLLATNIDARRLWEKLLRKAMRNEAPEIHFSD--NMLKEQLA 282 Query: 429 AIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSA-----FNLGAINNLDELEELAI 483 + T PL + L + F AI + Sbjct: 283 GCYAGARPQALAATLNATIPLATYDSSRLLTV--NLYSYVEQPFTEQAIFDHKLFRRHLF 340 Query: 484 LAVRALDALLDYQDYPI------------------------PAAKRGAMGRRTLGIGVIN 519 L R D L+D ++ I +R + R G+ + Sbjct: 341 LVQRLADDLVDIEEEKIDSMLQNIADAEVPAEAKMIEQKLWEKVRRHLLTYRPTGLLLTG 400 Query: 520 FAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILP 579 A LA G +A T +++ +++ ++A+E+GA ++ A+ L Sbjct: 401 EAETLAALGLSQDTPAAGAHTRALKQSLAIATCESTVKMAEERGAFSDYDAGREAENSLI 460 Query: 580 IDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNAT 632 + D L + ++ G RN + + P+ Q + T Sbjct: 461 LRLRNVAPD-------------LYDRMQKIGRRNLACTIVTPNRPDQQANGTT 500 >UniRef50_O64240 Putative adenosylcobalamin-dependent ribonucleoside-triphosphate reductase n=5 Tax=Siphoviridae RepID=VG50_BPMD2 Length = 693 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 93/650 (14%), Positives = 171/650 (26%), Gaps = 208/650 (32%) Query: 212 MSGVRTPTRQFSSCVL--IECGDSLDSINATSSAIVKYVSQRAGIG----INAGRIRALG 265 ++ + ++ S + DS + A ++ + + R+RA G Sbjct: 151 LAEAGQLSSRYDSDWVDAFVIEDSREGWAAALVDLIDTHYRDDVAHKERVYDVSRVRAAG 210 Query: 266 SPIRGGEAFHTGCIPFYKHFQTAVK------------------------------SCSQ- 294 ++ +G +P K + + +Q Sbjct: 211 RKLKTFGGTASGPVPLAKMLTEVSEILSRCAREGEQYRFEDGGALTGLDAMEIDHAIAQC 270 Query: 295 ---GGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGE 351 GGVR A +VE+ +K + G + V+++ ++ Sbjct: 271 VVAGGVRRSARMAMMHWADWQVETFTNIKQDSGSHW----TTNISVEVDDAFWSLAKA-- 324 Query: 352 DITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGR 411 D + + KA + + + G Sbjct: 325 --------------------------------PVDPLNPRSTKAHRVLKALSEGAVRNGE 352 Query: 412 IYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGA 471 + + N P + V +N C EI L C L NL A Sbjct: 353 PGMWDSSLSNVGEPNE-----VVCTNPCGEITLEPWEP------------CNLGHINLAA 395 Query: 472 IN------NLDELEELAILAVRALDALLDYQDYPI--PAAKRGAMGRRTLGIGVINFAYY 523 + +L L R L + + P ++ R +G+G + A Y Sbjct: 396 FVTDAGKTDYIDLIRAHRLMTRFL---IRATFSAVADPKSREVLDRNRRIGVGHLGVASY 452 Query: 524 LAKHGKRY----SDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILP 579 LA G+RY D + + + S+EL + P T Sbjct: 453 LALTGRRYSQAPGDKRFTAFLREMAAEVDRAAEEFSHEL---RIPVPVKKRT-------- 501 Query: 580 IDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPR 639 + P+ T +++ + GI P Sbjct: 502 ---------------------------------------VAPTGTIAKMPGVSEGIHPIF 522 Query: 640 GYVSIKASKDGIL---------RQVVPDYEHLHDAYEL-----LWEMPGNDGYLQLVGIM 685 I+ + +L + Y D Y+ + E+P D ++ V Sbjct: 523 SRYFIRRIRFSVLDNDQFLTASQYAADGYHVEKDQYDKSGNTWVVEIPTKDTLVEAVAAR 582 Query: 686 ----------------------------QKFIDQSISANTNYDPSRFPSGKVPMQQ---- 713 + D ++S N DP + V Sbjct: 583 FGRDAEDIVESANELTLHQLLAFQALYQTCWADNAVSFTANVDPDAYEGVDVAADLQRFS 642 Query: 714 -LLKDLLTAYKFGVKTLYYQN-TRDGAEDAQDDLVPSIQDDGCESGACKI 761 L+K + Y+ T+ E A V D+ C +GAC I Sbjct: 643 GLIKGSTIFPEESFPQAPYERITKQQYEAAAIKAVADGVDEECANGACPI 692 >UniRef50_Q5SM68 Ribonucleoside-diphosphate reductase n=6 Tax=Thermus RepID=Q5SM68_THET8 Length = 2202 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 72/406 (17%), Positives = 131/406 (32%), Gaps = 96/406 (23%) Query: 359 SDVPGLYDAFFADQEEFERLYTKYEKDDSIR--KQRVKAVELFSLMMQERASTGRIYIQN 416 D + R Y + + I + R + E+ + +E+ S ++++ Sbjct: 1190 HKRREAARKALPDGKGALREYPVAPQYELILGGENRDRFAEVVGFLQEEKQSKLLAFLRH 1249 Query: 417 VDHCNTHSPFDPAIAPVRQSN--LCLEIALPTKPL----NDVNDENGEIAL-----CTLS 465 + PF +A V + ++ P V GEI L C L Sbjct: 1250 RPRGSYRKPFLATVASVEPAGEAPVYDLTEPVTHSLIANGLVAHNCGEIPLTVGEPCDLG 1309 Query: 466 AFNLGAI-----NNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINF 520 A NL A ++E A+R LD +LD + +P + A R LG+G++ Sbjct: 1310 AMNLAAYVKDGEFQMEEFRRDVRTAIRFLDNVLDVNKFALPDNEMAAKKLRRLGLGLMGL 1369 Query: 521 AYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPI 580 A L K G Y A ++ A++ ++AS LA+E+G P + E Sbjct: 1370 ADALIKMGLPYDSEEARRKVYEIVSAMREEAIRASEALAEERGPFPLYEEHR-------- 1421 Query: 581 DTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRG 640 +S+ RN L + P+ T+S + ++GIEP Sbjct: 1422 --------------------EYFQSLGIKPRRNVALLTVAPTGTTSMLMGVSSGIEPVFS 1461 Query: 641 YVSIKASKD-------------------------------------------GILRQVVP 657 + G ++ + Sbjct: 1462 PFVWRRIGGEYKPLLHPLFVELMEAYPPAPGFAKEGKWDWEKIVEEIQKDGHGSVQNLPF 1521 Query: 658 DYEHLHDAYELLWEMPGNDGYLQLVGIMQKFID------QSISANT 697 E + + ++ D ++++ G +Q+ D SIS Sbjct: 1522 VPEAIRRVFLSAHDIHPLD-HVRMQGAVQRAFDAEGYAANSISKCI 1566 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 52/155 (33%), Gaps = 9/155 (5%) Query: 294 QGGVRGGAATLFYPMWHLEVESLLVLK-NNRGVEGNRVRHMDYGVQINKLMYTRLLKGED 352 R GA + H ++ L K +R + + V + K E Sbjct: 736 SHNTRRGAGMATLSIEHPDLLDFLTAKDLDREKAEGDISTFNISVLATDRFLEAVEKDEL 795 Query: 353 ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS-----IRKQRVKAVELFSLMMQERA 407 +P +VPG Y + + +L E++D + +V A L+ + Sbjct: 796 WP-VTPIEVPGKYYPYPVEGPYTGKLPPLPEREDGAKAIPLYGGKVPARWLWHEIAWHAW 854 Query: 408 STGRIYIQNVDHCNTHSPFD--PAIAPVRQSNLCL 440 +TG + VD N S +R +N C Sbjct: 855 ATGEPGLIFVDRVNALSALKGLGERYQIRSTNPCF 889 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 57/208 (27%), Gaps = 45/208 (21%) Query: 137 HDRD-MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKR 195 RD F A +YL ++ VA + E R ++ + Sbjct: 2 DMRDGYFFDEHAQAIARRQYLQPGDGD------ILGMFRRVAREIAKAEREEERSKWEEE 55 Query: 196 FYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLI----ECGDSLDSINATSSAIVKYVSQR 251 F+ ++ + S I++G T +C + +S I + + Sbjct: 56 FFRLMAEKRFSPGGRILAGAGTVHGNLLNCFVQGATENPPESFAGIMEVAKKLALVTKVG 115 Query: 252 AGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHL 311 G G+N R+ G R R + H Sbjct: 116 GGNGVNLDPYRSKGKRAR----------------------------RAVEGVAYLSAEHP 147 Query: 312 EVESLLV------LKNNRGVEGNRVRHM 333 +VE + + + E +++ Sbjct: 148 DVEDFIRGLMRPPINPDGAKEEISLKNF 175 Score = 76.2 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 1/75 (1%) Query: 230 CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFY-KHFQTA 288 D + I + + ++ +R G+PIRG +G + F + F Sbjct: 209 VPDDMGGIIDAAREAADLARKGQKPHVDFSLLRPEGAPIRGSGGTSSGPVSFLFEIFDNF 268 Query: 289 VKSCSQGGVRGGAAT 303 ++ + G G Sbjct: 269 LEWVAWGAEEAGPVA 283 >UniRef50_Q2S696 Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S696_SALRD Length = 932 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 76/357 (21%), Positives = 126/357 (35%), Gaps = 95/357 (26%) Query: 439 CLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDAL----LD 494 C EIALP+ P E +C LS+ N ++ + + + LDA+ +D Sbjct: 632 CSEIALPSGP--------DESFVCCLSSMNALHYDDWKD-TDAVETLTQFLDAVMQEFID 682 Query: 495 YQD--YPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLL 552 + A R A R +GIG++ + YL + + A+ + + I+ Sbjct: 683 GAKGMAHMDRAVRFAERHRAIGIGILGWHSYLQSNRIPFESAEASLTGAEIAKTIKERSY 742 Query: 553 KASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLR 612 AS ELA G P +G R Sbjct: 743 AASAELADRFGEPPVLEG--------------------------------------YGRR 764 Query: 613 NSTLSALMPSETSSQISN-ATNGIEPPRGYVSIKA------------------------- 646 N+T A+ P+++SS I + IEP + ++ Sbjct: 765 NATTMAVAPTKSSSFILGQVSPSIEPIKSNYFVQDRAKMKVTYKNPHLQALLQEKGRDTD 824 Query: 647 -------SKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNY 699 +DG ++ + + D ++ E+ + QK IDQS S N Sbjct: 825 AVWDEIALRDGSVQHLDFLSDEEKDVFKTFSEIS-QMAIIDQAAGRQKHIDQSQSLNLAI 883 Query: 700 DPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCES 756 DP G P++ + + + A+K GVK+LYYQ+ G AQ + CE+ Sbjct: 884 DP-----GSTPVKDINRLYVEAWKKGVKSLYYQH---GVNAAQSFSRDLLACKACEA 932 Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 95/299 (31%), Gaps = 58/299 (19%) Query: 143 FSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVST 202 + A L YL++ + +A + + RFY+ ++ Sbjct: 18 LNDEARTFLRRGYLLEGTG-------PEDRVREIAEHAEGLLEMDG---FADRFYEYMAR 67 Query: 203 FKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR 262 SL +P+ + SC DS+++I T + + G G +R Sbjct: 68 GYYSLASPVWANFGLDRGLPISCFGSYIDDSMEAILNTHAEVGMMTKVGGGTSGYFGDVR 127 Query: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 G+ I G PF + F + SQG R G + + H +VE L ++ Sbjct: 128 PRGASI-TNNGTSNGTYPFAQLFDKIINVVSQGETRRGHFAGYIDIEHPDVEEWLNIQT- 185 Query: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 EG+ ++ M YGV + ++ G+ Sbjct: 186 ---EGDAIQTMMYGVVVGDDWMEAMIDGDS------------------------------ 212 Query: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP--FDPAIAPVRQSNLC 439 L++ +++ R + G YI + P + V SNLC Sbjct: 213 -----------DKRALWAKVVESRMNLGIPYILFRGNVQDGRPQVYKDKGYDVHASNLC 260 >UniRef50_Q9XD73 Vitamin B12-dependent ribonucleotide reductase (Fragment) n=15 Tax=Actinomycetales RepID=NRDJ_STRCT Length = 599 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 62/367 (16%), Positives = 113/367 (30%), Gaps = 76/367 (20%) Query: 458 EIALCTLSAFNLGAIN------------------NLDELEELAILAVRALDALLDYQDYP 499 + + C L++ NL + + ++ L + A+D + + D+P Sbjct: 4 DNSSCNLASLNLMKFLRDDTASDGASGAGGNMSLDAERFAKVVELVITAMDISICFADFP 63 Query: 500 IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELA 559 R LGIG N L G Y L + + S ELA Sbjct: 64 TEKIGETTRAFRQLGIGYANLGALLMATGHAYDSDGGRALAGAITSLMTGTSYRRSAELA 123 Query: 560 KEQGACPWFNETTYAKGILPIDTYK--------KDLDTIANEPLHYDWEALRESIKTHGL 611 G + A + DLDT W+ + + + Sbjct: 124 AVVGPYEGYARNADAHKRVMRQHADANTAAQRMDDLDTPVWAAATEAWQDVLRLGEQNRF 183 Query: 612 RNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPD--YEHLH----- 663 RN+ S L P+ T + + T G+EP V K G Q+V + + L Sbjct: 184 RNAQASVLAPTGTIGLMMDCDTTGVEPDLALVKFKKLVGGGSMQIVNNTVPKALKRLGYQ 243 Query: 664 ----------------------------DAYELLW--EMPGNDGYLQLVGIMQKFIDQSI 693 + ++ G+++++ Q F+ +I Sbjct: 244 PEQVEAVVAHIAEHGNVIDAPGLKPEHYEVFDCAMGERAISPMGHVRMMAAAQPFLSGAI 303 Query: 694 SANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLYYQNTRDGAEDAQDDLVPSIQD 751 S N S ++++ + +K G+K +Y N + G Q ++ Sbjct: 304 SKTVNMPES------ATVEEIEEIYYEGWKLGLKALAIYRDNCKVG----QPLSAKKKEE 353 Query: 752 DGCESGA 758 E+ A Sbjct: 354 AKTEAPA 360 >UniRef50_B3QY00 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Bacteria RepID=B3QY00_CHLT3 Length = 1966 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 64/440 (14%), Positives = 108/440 (24%), Gaps = 125/440 (28%) Query: 127 EFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQ--------------NRVTGEI---YESA 169 + + + + + +S A L KY + + ++ S Sbjct: 31 DGSTVFEMHNVEVPVHWSQVATDILAQKYFRKAGVPQLSKDGKPVIDADGNQVFGGETSI 90 Query: 170 QFLYILVAACLFSN-------YPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP---- 218 + + +AAC E Y + + +P Sbjct: 91 KQVVHRMAACWRDWGERYGYFDSPEDAQAYYDETAYMLLKQMAAPNSPQWFNTGLAAAYG 150 Query: 219 --------------------------TRQFSSCVLIECGDSL---DSINATSSAIVKYVS 249 Q +C + D L I + Sbjct: 151 ISGRSQGHFFVDPDTGKLTQSEDSYTRPQAHACFIQSVQDDLVNEGGIFDLVVREARVFK 210 Query: 250 QRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGAATLFYPM 308 +G G N IRA G + G +G + F K F A + GG R A + + Sbjct: 211 FGSGTGTNFSNIRAEGEMLSG-GGTSSGLMSFLKIFDAAAGAIKSGGTTRRAAKMVIVNI 269 Query: 309 WHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAF 368 H ++E + K E +V M G +IN +L P L D Sbjct: 270 DHPDIEEFIEWK---AKEEEKVAAMVAGSKINSTFLKAILHEALENGADRKTNPALNDLI 326 Query: 369 FA-------------------------DQEEFERLYT----------------------- 380 D E ++ Y Sbjct: 327 QRALYRGVPMNYILRTLSLVSQGFTSLDFESYDTHYESEAYSTVSGQNSNNTIRLTNEFM 386 Query: 381 -----------KYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPA 429 ++ D S + V+A EL++ + +Q N P Sbjct: 387 QAVENDEMWELRWRTDGS-VCRTVRAAELWNKIAFSAWKCADPGLQFDTTINEWHTC-PN 444 Query: 430 IAPVRQSNLC--LEIALPTK 447 + SN C E + T Sbjct: 445 DGRINASNPCVTAETLVATD 464 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 68/195 (34%), Gaps = 29/195 (14%) Query: 458 EIALCTLSAFNLGAIN-------NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGR 510 + C L++ NL + D L A + L+ + YP P + + Sbjct: 831 DDTACNLASLNLIHFVNEKTGDVDTDALRHAARVWTLTLEISVLMAQYPSPKIAQQSYDY 890 Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNE 570 RTLG+G N L G Y A + + S E+A + GA P F Sbjct: 891 RTLGLGFANLGSLLMVSGTPYDSPKALAVAGAISAIMTGEAYATSAEMAADIGAFPKFAH 950 Query: 571 TTYAKGILPIDTY-------KKDLDTIANEPLHYD---------------WEALRESIKT 608 A + + K+D + ++ P+ D W+ + + Sbjct: 951 NRDAMLRVVRNHRHAAHNAPKEDYEDLSVVPMSLDPAHCPKKLCKVAGETWDRALKLGEK 1010 Query: 609 HGLRNSTLSALMPSE 623 HG RN+ +S + P+ Sbjct: 1011 HGFRNAQVSVIAPTG 1025 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQ 732 +++++ +Q FI +IS N + ++Q+ + L+++ + +K + Sbjct: 1637 IDYMAHVRMMAAVQPFISGAISKTVNMP------AEATVEQIREVYLSSWHYMLKAIALY 1690 Query: 733 NTRDGAEDAQDDLVPSIQD 751 D ++ +Q S D Sbjct: 1691 R--DTSKLSQPLNSASYDD 1707 >UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Chloroflexi (class) RepID=A7NFN4_ROSCS Length = 769 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 89/704 (12%), Positives = 192/704 (27%), Gaps = 164/704 (23%) Query: 5 LLVTKRDGSTERINLDKIHRVLDW--AAEGLHNVSISQVELRSHIQFYDGIK-------- 54 + KRDG ++ +I + A+ G + + + Sbjct: 28 TTIIKRDGRVVPFDVTRIENAMARCFASFGRTPDTPIPELAQRVVNIVAAKSQGKPPTVE 87 Query: 55 -TSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMG 113 DI E +++AA + + AA+ I + ++A + P E Sbjct: 88 GVQDIVEMVLQAAGE----------FEAAKRYILYRAERARERERRPIPDHVRRAFDEAR 137 Query: 114 KYDN------HLLEDYTEEEFK--QMDTFI---DHDRDMTFSYAAVKQLEGKYLVQNRVT 162 Y + Y+ + + +T+I D D A + Y R+ Sbjct: 138 VYFPTPLQQFQFFDKYSRFNYDLGRRETWIETVDRAVDYLHELAGDRLPRETY---ERIR 194 Query: 163 GEIYESAQFLYILVAACLFSNYPRETRL----------QYVKRFYDAV------STFKIS 206 I E + + + R + + + F +A+ S Sbjct: 195 RSILEMRAMPSMRL-LAMAGPAARRNAVAIYNCSYQPVESIDSFVEALIISMAGCGVGFS 253 Query: 207 LPTPIMSGVRTPTRQ---FSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRA 263 + + + RQ + + DS + ++ + + + +R Sbjct: 254 VESRYVENFPRIKRQTGKPPTTFV--VEDSAEGWADALRYGLETWFEGGDVHFDLSHLRP 311 Query: 264 LGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNR 323 G+P+R +G PF R G+ ++ + Sbjct: 312 AGAPLRTKGGRASGPEPFRAMLDFVRNRIF---ARQGSFLRPIDAH--DIMCAVGNAAVS 366 Query: 324 GVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYE 383 G + + I+LF D + E + + Sbjct: 367 GG---------------------VRRTAMISLFDYDDDEMRLAKSGDFERENSQRWNANN 405 Query: 384 KD--DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLE 441 +++ + F M++ + G I N + N P A +N C E Sbjct: 406 SAVWPRGGLTQLEFIRHFMEMVESQR--GEPGIFNREASNLMKPARRKEAEF-GTNPCGE 462 Query: 442 IALPTKPLNDVNDENGEIALCTLSAFNLGAINN-LDELEELAILAVRALDALLDYQDYP- 499 I L C L + + +++ D L + +A +P Sbjct: 463 IVLRPWQF------------CNL-SAAVARVDDTFDTLRDKVEVATIIGTIQSLATHFPG 509 Query: 500 -IPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNEL 558 P ++ R LG+ + + A + + ++ E+ Sbjct: 510 LRPMWRQNCEEERLLGVDITG----------QMDSPVAQD--AQVKRRLK--------EI 549 Query: 559 AKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNS-TLS 617 A E R++ + G+ +S ++ Sbjct: 550 AIEVN---------------------------------------RQTATSLGINSSAAIT 570 Query: 618 ALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEH 661 + PS SSQ+ + +G+ I+ + + + Sbjct: 571 CVKPSGNSSQLLDCASGLHARWAPYYIRNVRVSVHSPLFKVLRD 614 >UniRef50_Q9DWE5 PR45 n=1 Tax=Rat cytomegalovirus Maastricht RepID=Q9DWE5_RCMVM Length = 1064 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 87/515 (16%), Positives = 174/515 (33%), Gaps = 77/515 (14%) Query: 171 FLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCV---- 226 + +FS PR L+ + A+ +F + LP +M+ Sbjct: 435 DTFGGGCEAVFSARPR-GALEVFEAVLSALCSFAVVLPPQVMAHAGLRGGLPL--FEGVA 491 Query: 227 ----LIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFY 282 + + + + + ++ + + + + I + + Sbjct: 492 YRPRGVAVEGTWNG---SMQNVCDLLANGVSVSVQLSDLLGDVAGILKSFGLFCASLRDH 548 Query: 283 KHFQTAVKSCSQGGVRGGAATLFYPMWHLEV---ESLLVLKNNRGVEGNRVRHMDYGVQI 339 + F T ++ +W +++ S + EG + Y V + Sbjct: 549 RRFDTKLRVV-------------VDLWSVDLVYAFSFI------LGEGRAYPELLYAVNV 589 Query: 340 NKLMYTRLLKGED---ITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS-------IR 389 + + R ++ +F S+ L D++ F Y + E + + Sbjct: 590 PQFFWERYVEEGASGRWQVFQKSECKSLCRV---DEKGFRTAYERLELEGNGLSLSPWWV 646 Query: 390 KQRVKA---------VELFSLMMQERASTGRIYIQNVD---HCNTHSPFDPAIAPVRQSN 437 + + A V ++L TGR+ + + CN+ P + Sbjct: 647 VRHLDACVALGNTAVVYPYNLKSAMVGETGRLLLCGPELSLVCNSFLGVFPENKI----D 702 Query: 438 LCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRA----LDALL 493 +CLE L D E + L + L L AV +DA++ Sbjct: 703 VCLENCLLEGSGADDAAAATEGEVPVLGH---EVFFSFRSLRVLVRDAVVIGNVLMDAVI 759 Query: 494 DYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLK 553 + A R L + V+ F L + G Y+D ++ L + E + Y ++ Sbjct: 760 RDNVF---GAGDVMCLYRPLQLRVLGFHAVLGRLGLLYTDDASVLLGRRIAEFVHYAAVR 816 Query: 554 ASNELAKEQG-ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLR 612 AS +L P F+ + +A G L D + L ++ P + W LRE + +G+R Sbjct: 817 ASVDLCVHGAEPFPKFSRSLFATGRLYPDLFDDPLQETSSLPAGH-WAQLREDVVRYGVR 875 Query: 613 NSTLSALMPSETSSQISNATNGIEPPRGYVSIKAS 647 NS E S+ ++ T G+ P +S++ S Sbjct: 876 NSAFVCGGLGEESANVAGTTPGMFPRAYNLSLEPS 910 >UniRef50_O55567 P25 n=1 Tax=Leucania separata nuclear polyhedrosis virus RepID=O55567_NPVLS Length = 222 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 75/189 (39%), Gaps = 5/189 (2%) Query: 224 SCVLIECG-DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFY 282 SC L+ DS+ I T + GIG+N +R S I+ +G +P Sbjct: 19 SCFLLTMESDSIRGIYNTLNDCAMISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPML 78 Query: 283 KHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKL 342 + F V+ + ++ +L ++ N G E + R + + + + Sbjct: 79 RVFNNMVRHVIKVASEKAPKQCTLNRGIGDIMDVLHMRRNIGSEDTKARDLMNALWVPDI 138 Query: 343 MYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLM 402 R+ + +L P++ P L D + D E + + Y D ++++ AV L + Sbjct: 139 FMKRVEENGIWSLMCPNECPKLNDTYGDDFEYWYKHYE----DKGQFREQMPAVTLMRNI 194 Query: 403 MQERASTGR 411 ++ +A T Sbjct: 195 IEIQAETAH 203 >UniRef50_A6Q367 Probable adenosylcobalamin-dependent ribonucleoside-triphosphate reductase n=1 Tax=Nitratiruptor sp. SB155-2 RepID=RTPR_NITSB Length = 650 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 88/662 (13%), Positives = 180/662 (27%), Gaps = 197/662 (29%) Query: 141 MTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILV-----------AACLFSNYPRETR 189 F + Y E I V A + E Sbjct: 24 FGFGLLSEVTFYRSYSRLKEDGTN--EHWPDTVIRVTEGIFSIRKNHALNYHLPWDEEQA 81 Query: 190 LQYVKRFYDAVSTFKISLPTPIMSGVRTPT------RQFSSCV----------------- 226 + K F ++ + P + + T +C Sbjct: 82 QIFAKEFALSMLQLRWLPPGRGLWMMGTRYMYERGSAGLYNCAAVDTSNLAHAAEWAMDM 141 Query: 227 --------------------------LIECGDSLDSINATSSAIVK-YVSQRAGIGINAG 259 + DS + + +++ Y + Sbjct: 142 LMVGAGVGFNTAWSGKATKPDKKHPKIYVIDDSKEGWVKSVRLLIQSYTDNGPFYRFDYS 201 Query: 260 RIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVL 319 +IR GSP++ G P + H ++E +L Sbjct: 202 KIRPAGSPLKTFGGIAPGPEPLKRL-------------------------HKKIEQILDD 236 Query: 320 KNNRGVEGNRV---RHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEF- 375 ++ ++ R + G+ + R + I + P D L+ D E+F Sbjct: 237 YLDKKIDKTRCVVDLFNNIGLCVVSGNIRRSAE---IAIGRPGDKTFLH---LKDYEKFP 290 Query: 376 ERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAI-APVR 434 ER + ++S+ + + + AS G + ++++ + F + Sbjct: 291 ERKEYGWISNNSVVIENLDDFHYIDAITSLIASNGEPGVLHLENMQKYGRFGEIVPDRAW 350 Query: 435 QSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLD 494 SN C EIAL + LC LS + +N ++ ++L A + Sbjct: 351 LSNPCGEIALES------------YELCNLSEIFISKCSNEEDFQKLIEYATFYASTV-- 396 Query: 495 YQDYPI--PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQ--YY 550 P P R +G+ V A + K G + ++ Y Sbjct: 397 -NLLPTHRPETNEIIARNRRIGVSVSGVADAIEKFGL-----------ETIIKWLRKGYE 444 Query: 551 LLKASNE-LAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH 609 ++ NE LAKE G Sbjct: 445 KVRTVNERLAKEAGIPVSLK---------------------------------------- 464 Query: 610 GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEH-------- 661 ++ + PS T S ++ + G+ P +++ + G ++ Sbjct: 465 ------VTCVKPSGTISILAGTSPGMHYPLATYALRRIRIGKTSKLAKLLIDSGLSFEED 518 Query: 662 --LHDAYELLW-----------EMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGK 708 ++Y + E+ + L L + +++ D +S +DP+R+ + Sbjct: 519 IYDKNSYVFAFPIHYDNPRSIKEVDIYEQMLVLTMLQREWADNMVSNTIQFDPTRYDAKD 578 Query: 709 VP 710 + Sbjct: 579 LS 580 >UniRef50_Q3B5C1 Ribonucleotide reductase family protein n=9 Tax=Bacteria RepID=Q3B5C1_PELLD Length = 1521 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 59/443 (13%), Positives = 113/443 (25%), Gaps = 123/443 (27%) Query: 123 YTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQ--------------NRVTGEI--- 165 + ++ + + +S A L KY + + + Sbjct: 27 LRNTDGSKVFEMNELEVPKHWSQMAADILAQKYFRKTGVPQVDGDGNPLLDEEGRPVTGS 86 Query: 166 YESAQFLYILVA---ACLFSNYPRETRLQYVKRFYD----AVSTFKISLPTPIMSGVRTP 218 S + + +A + + + FYD + + + +P Sbjct: 87 EHSIRQVVHRLAGCWRQWGEKHGYFDSPEDAEAFYDEVAYMLIAQQGAPNSPQWFNTGLN 146 Query: 219 ------------------------------TRQFSSCVLIECGDSL---DSINATSSAIV 245 Q +C + D L I + Sbjct: 147 FAYGITGPAQGHYHVDPATKKVVESEDAYTRPQAHACFIQSVNDDLVNEGGIFDLAVREA 206 Query: 246 KYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGAATL 304 + +G G N +R+ G + GG + + F K F +A + GG R A + Sbjct: 207 RVFKFGSGSGTNYSNLRSSGEKLSGGGSSSG-LMSFLKIFDSAAGAIKSGGTTRRAAKMV 265 Query: 305 FYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGL 364 + H +VE + K E ++V + G +I +++ + + P L Sbjct: 266 IIDIDHPDVEKFIEWK---AREEDKVASLVAGSRICSRFLQAIVEEAILNGADRLENPKL 322 Query: 365 -------------------------YDAFFADQEEFERLYT------------------- 380 D EE++ Y Sbjct: 323 QRLIENALHRAVPMSYIIRVLALVEQGYTTLDFEEYDTHYESEAYQTVGGQNSNNTVRVT 382 Query: 381 --------------KYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPF 426 E+ + V A EL+ ++ +Q N Sbjct: 383 NAFMKAVENNELWMLKERTTGKTARAVNARELWEKILLSAWKCADPGLQFDTTINEWHTC 442 Query: 427 DPAIAPVRQSNLC--LEIALPTK 447 PA + SN C E + T Sbjct: 443 -PAAGRINASNPCVTAETLVATD 464 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 83/255 (32%), Gaps = 32/255 (12%) Query: 458 EIALCTLSAFNLGAINNLD-------ELEELAILAVRALDALLDYQDYPIPAAKRGAMGR 510 + C L++ NL + + EL A L L+ + +P P R + Sbjct: 831 DNTACNLASLNLIHFVDEESGHVKINELRHAAALWTVVLEISVLMAHFPSPDIARLSYEY 890 Query: 511 RTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNE 570 RTLG+G N L G Y A L I S E++++ G + Sbjct: 891 RTLGLGFANLGTVLMVLGIPYDSPKALALAGAISAIITGQAYVTSAEISRDLGPFDGYQA 950 Query: 571 T------------TYAK----------GILPIDTYKKDLDTIANEPLHYDWEALRESIKT 608 A+ + P + E W+ + K Sbjct: 951 NSKEMLRVIRNHRRAARNESEEEYEELSVKPRGIDSEYCPKELFEAAGSVWDEALQKGKK 1010 Query: 609 HGLRNSTLSALMPSETSSQISNA-TNGIEPPRGYVSIKASKDGILRQVVPDYEH--LHDA 665 +G RN+ +S + P+ T + + T GIEP V K G ++V H L Sbjct: 1011 YGFRNAQVSVIAPTGTIGLVMDCDTTGIEPEFAIVKFKKLAGGGYFKIVNQSVHKALKRL 1070 Query: 666 YELLWEMPGNDGYLQ 680 E+ + Y + Sbjct: 1071 GYAAQEIEEIEKYCK 1085 Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 12/81 (14%) Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVK--TLY 730 + +++++ +Q FI +IS N + ++ + L+ ++ VK T+Y Sbjct: 1207 INHMAHVRMMSSVQPFISGAISKTVNMPAT------ATTAEIGEVYLSGWQHMVKAITVY 1260 Query: 731 YQNTRDGAEDAQDDLVPSIQD 751 RDG++ +Q + S QD Sbjct: 1261 ----RDGSKLSQPLNISSYQD 1277 >UniRef50_A8MLU7 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Alkaliphilus RepID=A8MLU7_ALKOO Length = 784 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 101/869 (11%), Positives = 239/869 (27%), Gaps = 199/869 (22%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAE----GLHNVSISQVELRSHIQFYDGIKT---SD 57 + V KR+G N KI + A G+ + ++ + + K + Sbjct: 2 IQVMKRNGRLVEFNPSKITNAIKKAMAETKLGVDHNLSVKITEEIKEKIQNNAKPIHVEE 61 Query: 58 IHETIIKAA----ADLISRDAPDYQYLAARLAI--FHLRKKAYGQFEPPALYDHVVKMVE 111 I + + +++ Y+ A++ +K + + + Sbjct: 62 IQDIVEMLLMSSDRKDVAKRYIIYRNERAKIRANQKSSDEKLLTDEFISQYKHQIPPLNQ 121 Query: 112 MGKYDNHLLE-DYTEEEFKQMDTFIDHDRDMTFS--------YAAVKQLEGKYLVQNRVT 162 +G + + + +EE ++ + R + ++ A K + Y ++ ++ Sbjct: 122 LGNFVYYRTYSRWLQEEGRREYWWETVRRAVEYNCSLVPTRREEAEKLFDNVYNLRQFLS 181 Query: 163 GEIY----ESAQFLYILVAACLFSNYPRETRLQYVKRFYDAV------------------ 200 G + S Y + + S ++ + FY + Sbjct: 182 GRTFWVGGTSVAKNYPM-SNYNCSFVVIDSFEAFRDLFYLLMIGSGVGARVLKEDVQNLP 240 Query: 201 ---STFKISLPTPIMSGVRTPTRQFSSCV------LIECGDSLDSINATSSAIVKYVSQR 251 + ++I + ++ S I GDS + + K + Sbjct: 241 KIRTDYEIIHKDYVNISIKDREDNTSLVFSHNNSVKITVGDSKEGWIQSLDFFFKLLYSN 300 Query: 252 AGIGI-----NAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFY 306 I + +R G+ ++ +G F K G+ + Sbjct: 301 EYRNIKTIIVDYDHVRPKGAKLKSFGGTASGHESLKNMFYKIDKVIKNSRKVNGSGKIKL 360 Query: 307 P-MWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLY 365 + L++ +++ G + + + + LY Sbjct: 361 RPIDCLDIANIIGENVVVGGVRRTAE--MILIDADDK--ECVEAKSN-----------LY 405 Query: 366 DAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSP 425 + + + ++SI + E +Q+ +G N + P Sbjct: 406 KQIDGQWIVDQNIIHRQMSNNSIYYTEKPSREKLHWQIQQMRYSGEPGWINAEAAAKRRP 465 Query: 426 FDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIN------NLDELE 479 + N C EI L ++ LC L+ N+ A +L+ + Sbjct: 466 ------NMNGVNPCGEILLDSQ------------GLCNLTTINVMAFVKEDGTLDLEGII 507 Query: 480 ELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNL 539 E L+VRA + + +P + + +G + + + D A Sbjct: 508 EAQKLSVRAGYRMTCV-ELELPHWDKVQQRDKLVGCSLTGWQDLVNATTM---DIEAQK- 562 Query: 540 THKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDW 599 K ++ + AKE G N PL Sbjct: 563 --KLLSMLRKAARNEVDAYAKEIG---------------------------QNIPLL--- 590 Query: 600 EALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDY 659 ++ + P T SQ+ ++G+ I+ + +V Sbjct: 591 ----------------VTTVKPEGTLSQLPTVSSGVHYSHSPYYIRRIRISAHDPLVKVC 634 Query: 660 EHL-HDAY------------------------ELLWEMPGNDGYLQLVGIMQKFIDQSIS 694 E L + Y +++ + M+ ++D + S Sbjct: 635 EELEYPVYPEVGQDWDTCSTKVVEFPVKAPAGRTKYDISAIEQLENYKLFMESYVDHNCS 694 Query: 695 ANTNYDPSRFPSGKVP----MQQLLKDLLTA------------------YKFGVKTLYYQ 732 + + + ++ A Y ++++ Sbjct: 695 ITIHVRNHEWEEVEEWVWNHWDDVVALSFLALEDNFYQLLPYESIDEEEYNKRLRSMKAF 754 Query: 733 NTRDGAEDAQDDLVPSIQDDGCESGACKI 761 ++ + ++ I D C++G C I Sbjct: 755 IPSLISKYEEKEMDLDIGSDSCDNGICPI 783 >UniRef50_Q65357 Putative uncharacterized protein n=1 Tax=Mamestra brassicae MNPV RepID=Q65357_NPVMB Length = 216 Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 88/221 (39%), Gaps = 16/221 (7%) Query: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHETI 62 + V KRDG E+++ K+++ + L++ V V L+ D T DI Sbjct: 1 MYVVKRDGRLEQVSSSKLYQRIHRLCHDLNSQFVHPRAVSLKVIKGLSDNTTTEDIDIYA 60 Query: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLED 122 AA L DY LA RL + ++ K F H +V + Sbjct: 61 ASVAATLT-YKHYDYDTLAGRLLVTNMHKYVDESFTKVVQELHKHNLVSDELLSVTI--- 116 Query: 123 YTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFS 182 + K ++ ID D+ ++Y + L+ YL++ + ++ E+ Q +++ +A +F Sbjct: 117 ---KHSKIIEENIDMKLDLDYNYFGYQTLKNGYLIK--INEKVAETIQHMHMRIALGIFG 171 Query: 183 NYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFS 223 + + Y +S + +P M T T Q S Sbjct: 172 -----DDIDSAIKSYKFLSRKMYTHASPTMFAAGTLTPQTS 207 >UniRef50_B9Y435 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y435_9FIRM Length = 379 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 96/285 (33%), Gaps = 14/285 (4%) Query: 50 YDGIKTSDIHETIIKAAADLISRDAPDYQYLAA--RLAIFHLRKKAYGQFEPPALYDHVV 107 Y +++ I + L D+ A RL + + + + D V+ Sbjct: 3 YRKETIVKLNQDIREFFPYLTEIQPEDHTIHAGVSRLVMLDRYAQKDRELRTLGVGDIVL 62 Query: 108 KMVEMGKYDNHL---LEDYTEEEFKQMDTFIDHDRDMTFS---YAAVKQLEGKYLVQNRV 161 +++ + + E + + I+ + T + + + ++ Sbjct: 63 TVIKEDPKYPARGVGVVKAIDWEKESVTIEIEEEFRGTLEDEQESITGIIRRPFAEIDKP 122 Query: 162 TGEIYESAQFLYILVAACLFSNYPR-ETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR 220 YE + V L R +Y F + + + ++ G + T+ Sbjct: 123 MEIYYE---QIARRVGTALAEPETDVAQREKYAGLFTEQLKKLNVIPAGRVLFGAGSGTQ 179 Query: 221 -QFSSCVLIE-CGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGC 278 + +C ++ DS I +++ +S+ G+G N +R +P +G +G Sbjct: 180 VTYFNCFVMPFVEDSRGGIAEHRKEVMEIMSRGGGVGTNGSTLRPKHAPAKGVGGRSSGA 239 Query: 279 IPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNR 323 + + QGG R GA + WH ++ ++ K Sbjct: 240 VSWLNDIANLTNLVEQGGSRRGAQMIMLADWHPDIIEFIISKMQN 284 >UniRef50_B8YMB4 Ribonucleoside-diphosphate reductase (Fragment) n=2 Tax=Human herpesvirus 3 RepID=B8YMB4_HHV3 Length = 375 Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 60/396 (15%), Positives = 135/396 (34%), Gaps = 57/396 (14%) Query: 19 LDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDY- 77 + +H +++ + + I E + ++ + I T I+ + +D Y Sbjct: 7 FNTVHDIINRLCQHGYKEYIIPPESTTPVELMEYIST------IVSKLKAVTRQDERVYR 60 Query: 78 ---QYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVE--MGKYDNHLLEDYTEEEFKQMD 132 + + R+ + + + + L V + +E + +LE + ++++ + Sbjct: 61 CCGELIHCRINLRSVSMETWLTSPILCLTPRVRQAIEGRRDEIRRAILEPFLKDQYPALA 120 Query: 133 TFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLF----------- 181 T + + E YL + ES ++ +AA + Sbjct: 121 ---------TLGLQSALKYEDFYLTKLEEGK--LESLCQFFLRLAATVTTEIVNLPKIAT 169 Query: 182 ---SNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSL---D 235 T + F+ A++ KI TP+M + T +SC L++ S+ Sbjct: 170 LIPGINDGYTWTDVCRVFFTALACQKIVPATPVMMFLGRETGATASCYLMDPE-SITVGR 228 Query: 236 SINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQG 295 ++ A + + + R G+GI+ + + E G + K V + + Sbjct: 229 AVRAITGDVGTVLQSRGGVGISLQSLN-----LIPTENQTKGLLAVLKLLDCMVMAINSD 283 Query: 296 GVRGGAATLFYPMWHLEVESLLVLKNNRG-VEGNRVRHMDYGVQINKLMYTRLL------ 348 R ++ WH++++++L + E R ++ + L + R L Sbjct: 284 CERPTGVCVYIEPWHVDLQTVLATRGMLVRDEIFRCDNIFCCLWTPDLFFERYLSYLKGA 343 Query: 349 KGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEK 384 TLF E F Y + E+ Sbjct: 344 SNVQWTLFD----NRADILRTLHGEAFTSTYLRLER 375 >UniRef50_A7KA98 Putative uncharacterized protein Z838L n=1 Tax=Acanthocystis turfacea Chlorella virus 1 RepID=A7KA98_9PHYC Length = 627 Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats. Identities = 80/668 (11%), Positives = 172/668 (25%), Gaps = 147/668 (22%) Query: 107 VKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTF-SYAAVKQLEGKYLVQNRVTGEI 165 K + +Y L + E + + + D F A+++LE ++ V I Sbjct: 6 QKYIHRSRYAKFLDSEKRRENWDET---VSRYVDYIFEKTNALQELEECAELKKEVYDSI 62 Query: 166 Y---ESAQFLYILVAACLFSNYP---------RETRLQYVKRFYDAVSTFK---ISLPTP 210 Y ++ A + + + S+ Sbjct: 63 YNLDVMPSMRAMMTAGKAADIDNTCIYNCSYLPIDDPKAFDEAMFILMSGTGVGFSVEDK 122 Query: 211 IMSGVR-TPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIR 269 ++ + P + F S +I DS + ++ + + IR G+ ++ Sbjct: 123 YVAKLPEVPDKLFQSNHIITVHDSRAGWAKSLRILIAMLYAGEVPTWDVSGIRPPGARLK 182 Query: 270 GGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNR 329 +G P + F VK+ R ++ + G Sbjct: 183 TFGGRASGPKPLVELFWFVVKTFKGAAGRK---LTTLECH--DIMCKIGEIVVSGGVR-- 235 Query: 330 VRHMDYGVQ-INKLMYTRLLKGEDITLFSPS---DVPGLYDAFFADQEEFERLYTKYEKD 385 R + ++ G + +Y+ + + Y Sbjct: 236 -RSAMISLSDLDDDRMRSAKSGPWWETAPHRALANNSAVYNTKPTVGKFMTEWLSLYNSH 294 Query: 386 DSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALP 445 R + E + ++ S F+ +N C EI L Sbjct: 295 AGERG--IVNREAMKKIAKKHG--------------RDSSFE------FGTNPCAEIILR 332 Query: 446 TKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPA--A 503 C L+ + A + + L + +A + +P Sbjct: 333 PYQF------------CNLTEVVVRATDTKETLMKKIRVATIIGTVQSTFSKFPYLRKIW 380 Query: 504 KRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG 563 K+ R LG+ + + +L E+++ Y + ++E A+ G Sbjct: 381 KKNTEEERLLGVSLTGIFDNTNMC------TNTKDLEDTL-ESLRDYSKQVNSEFAERLG 433 Query: 564 ACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSE 623 +++ ++ + PS Sbjct: 434 IP----------------------------------------------KSTAITCVKPSG 447 Query: 624 TSSQISNATNGIEPPRGYVSIKASKDGILRQ-----VVPDYEHLHDAYELL--------- 669 T SQ+ ++ +GI P I+ + + E D ++ Sbjct: 448 TVSQLVDSASGIHPRHSKYYIRRIRGNKADPITQFMINAGVEAEDDIFKPASTTVFSFAI 507 Query: 670 -------WEMPGNDGYLQLVGIMQK-FIDQSISANTNYDPSRFPSGKV----PMQQLLKD 717 E +L+L QK + S + ++P +L Sbjct: 508 KAPSGIVREDVSPIQHLELWLAYQKYWCSHKPSVTISVTEDQWPEVGAWCWKNFDELSGV 567 Query: 718 LLTAYKFG 725 Y G Sbjct: 568 SFLPYDGG 575 >UniRef50_Q9G0G5 RP ribonucleotide reductase n=6 Tax=root RepID=Q9G0G5_9CAUD Length = 671 Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats. Identities = 95/599 (15%), Positives = 170/599 (28%), Gaps = 169/599 (28%) Query: 228 IECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTG---------- 277 + GDS ++ + +V + I +N IRA G ++G +G Sbjct: 176 VVVGDSAEAWAKSFGKLVAMKKRVDIIRLNYREIRAAGMRLKGYGWISSGDSDLSVAQTA 235 Query: 278 -----------CIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVE 326 + + R A P+ + E+++ + K Sbjct: 236 ICGILNDRAGQLLRHMDILDLLNHMGTVLSSRRSAEIAVLPVTNPEIDAFISAK------ 289 Query: 327 GNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDD 386 +D L ++ D + Sbjct: 290 ------------------------KDFWLHGNEHRQQSNNSIMFDTK------------- 312 Query: 387 SIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPT 446 + + +F +++ S N + +P+ + N C EI L Sbjct: 313 ---PTKWELSYIFDKIVEAGGS--EPGFINAEAARKRAPW------FKGVNPCAEILL-- 359 Query: 447 KPLNDVNDENGEIALCTLSAFNLGAIN-NLDELEELAILAVRA--------LDA-LLDYQ 496 G + C L + G + LE LA RA LD +L Sbjct: 360 ----------GNKSFCNLVEVDWGKFLGDHGGLERAVWLAARANYRQTCVNLDDGVLQRS 409 Query: 497 DYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASN 556 + + R G+G +L + N ++++ K +N Sbjct: 410 WHEL------NEFLRLCGVGGTGIVKFL-------DHYTGRNNVASMLQSLRAQAHKGAN 456 Query: 557 ELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTL 616 +A+E G + P T K +DT E + + + + + N T Sbjct: 457 SMAEEFGT----PMPKAVTTVKPSGTLSKIMDTT---------EGVHKPLGKYIINNITF 503 Query: 617 SALMPSETSSQISNAT---NGIEPPRGYVSIKA-SKDGILRQVVPDYEHLHDAYELLWEM 672 S P S + + EP V++ D +V D +H E E Sbjct: 504 SKDDPIIASLEAAGYKVFDKPFEPSSKLVAMPVCYDDVSFDEVETDRGTVHVNLESAVEQ 563 Query: 673 PGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKF--GVKTLY 730 L M ++D + S +YDPS P+ ++ +LT + GV +Y Sbjct: 564 LDRYKLL-----MDNYVDHNCSVTISYDPSEVPA-------IIDWILTNWDTYVGVSFIY 611 Query: 731 YQNTRDGAEDAQD----------------------------DLVPSIQDDGCESGACKI 761 + AED + D+ C +GAC I Sbjct: 612 RNDPTKTAEDLGYAYLPQEVITEEAYVAYTSQLKPLDLSGLTSDDDLVDEACATGACPI 670 >UniRef50_B1ZWW1 ATP-cone domain protein n=2 Tax=Opitutaceae RepID=B1ZWW1_OPITP Length = 842 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 89/610 (14%), Positives = 162/610 (26%), Gaps = 141/610 (23%) Query: 6 LVTKRDGSTERINLDKIHRVLDWA-------------------AEGLHNVSISQV----- 41 +V KRDGS R + K+ R L A GL + ++V Sbjct: 38 MVIKRDGSKVRFDQSKVTRALALAFHEVRTDNAPNPYRDHLLACFGLDTETFNEVSRISG 97 Query: 42 --ELRSHIQFYDGI--KTSDIHETIIKAAADL----ISRDAPDYQYLAARLAIFHLRKKA 93 + + DG + + KA A ++R Y+ A + H Sbjct: 98 AVAQMLELYYRDGKHPSIEQVQDAAEKAIAAAGHWEVARAYMLYRARHAERRLAHYVDNG 157 Query: 94 YGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEF----KQMDTFIDHDRDMTFSYAAVK 149 + A Y + + +E + +++ + + A K Sbjct: 158 MADYIAMAKYARYRPDLGRREIFTEGVERVRDMHLTFFADKLERQLSSALPAEITDLAGK 217 Query: 150 QLEGKYLVQNRVTGEIYESAQFLYILVA-----------------------ACLFSNYPR 186 E LV++ + + + VA ++ Sbjct: 218 NAE--LLVRSIGGMRLDQIIADAFTQVATKKVLPSMRSMQFGGPAILKNHSRIFNCSFAN 275 Query: 187 ETRLQYVKRFYDAVSTF------------KISLPTPIMSGVRTPTRQFSSCVLIECGDSL 234 R+++ + ++ + + + P P G D++ Sbjct: 276 VDRIEFFREYFFLLLSGCGVGFSVQKHHIAMLPPLPP-RGAENDLPVVH----FHIEDTI 330 Query: 235 DSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQ 294 + + A++ + I + RIR GS ++ G +P K + Sbjct: 331 EGWSDALHALIMSFYEGTKIEFDYSRIRPRGSLLKTSGGKAPGHLPLKKALGKVEALLHE 390 Query: 295 GGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDIT 354 R + L +M + R I Sbjct: 391 AAGRA------LRP-----IEVYDL------------NMFIAKAVLAGGIRR---SATIC 424 Query: 355 LFSPSDVPGLYDAFFADQEEFERLYTKYEKDDS-IRKQRVKAVELFSLMMQERASTGRIY 413 LFSP D + F++ + ++S + + K +E F + + + G Sbjct: 425 LFSPDDEEMMNAKT---GNWFDKHPHRSASNNSAVLSRSDKNIEHFKKLFKAQKEFGEPG 481 Query: 414 IQNVDHCNTHSPFDPAIAPVRQSNLCLEI-ALPTKPLNDVNDENGEIAL----------- 461 DH P N C EI LP DE ++ Sbjct: 482 FFFNDH------------PDAGCNPCAEINLLPVVNWELSQDEVAKLFANGYKGDLPGTT 529 Query: 462 -------CTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPI--PAAKRGAMGRRT 512 C L+ N A + I A Y D P P K Sbjct: 530 RLSGFQHCNLTTINGQAATTETAFYKACIAATVIGTLQAAYTDMPYLGPITKLINEHDSL 589 Query: 513 LGIGVINFAY 522 LG+ + F Sbjct: 590 LGVSICGFMD 599 >UniRef50_B9R6L5 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R6L5_9RHOB Length = 684 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 81/513 (15%), Positives = 148/513 (28%), Gaps = 76/513 (14%) Query: 228 IECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQT 287 I+ GDS ++ I++ + I ++ +IR+ G ++G +G F K Sbjct: 162 IQIGDSAEAWAKVPGKILRMKKKVDKIVLDFTQIRSAGERLKGYGWISSGDETFSK---A 218 Query: 288 AVKSCSQGGVRGGAATLFYPMWHLEVESLL--VLKNNRGVEGNRVRHMDYGVQINKLMYT 345 + C+ R G + ++ + L L + R E + D Sbjct: 219 LFEICNILNRRAGQLLTKIDIM--DIMNWLGTTLSSRRSAEICVMPSSDPEAL---DFAV 273 Query: 346 RLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQE 405 S V D F EEF R T+ + ++ + LF + Sbjct: 274 AKKNHYSWKWPDGSLVEFPEDCFGEAYEEFIREITEKGAYWNPQRAQSNNSLLFWEKPTK 333 Query: 406 RASTGRIYIQNVDH-------CNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGE 458 G ++ VD N + + N C EI L G+ Sbjct: 334 LEIKG-LFQMMVDAGGSEPGFINAAAA-KARGGWFKGCNPCAEILL------------GD 379 Query: 459 IALCTLSAFNLGAIN-NLDELEELAILAVRA---LDALLDYQDYPIPAAKRGAMGRRTLG 514 + C L ++ + L LA RA + + R G Sbjct: 380 KSFCNLVEVDMAKFIGDEGGLWYAIYLAARANYRQTCVNLRDGVLSDSWHELNEFLRLTG 439 Query: 515 IGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYA 574 +G+ ++ DG ++ +YY + +A E G + Sbjct: 440 VGLTGI--------VKWIDGGSHKRPDIILGHCRYYAQEGVTTMADELG----LPLSKAT 487 Query: 575 KGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNG 634 + P T K +DT E + I + + N S P + + Sbjct: 488 TTVKPSGTLGKIMDTS---------EGVHRPIAKYIINNVRFSKEDPLVPLLRDAGYRVF 538 Query: 635 IEPPRG---YVSIKASKDG-ILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFID 690 +P ++ DG +V E L M ++D Sbjct: 539 DDPYASDGVLAALPVVNDGVKFDEVNGLLIDN----ESAVSQLERYKLL-----MDNYVD 589 Query: 691 QSISANTNYDPSRFPSGKVPMQQLLKDLLTAYK 723 + S +Y P +++ L + Sbjct: 590 HNCSITVSYRVEEIP-------EIVDWLFENWD 615 >UniRef50_A7XXH5 Ribonucleoside-triphosphate reductase n=2 Tax=unclassified Siphoviridae RepID=A7XXH5_9CAUD Length = 661 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 72/532 (13%), Positives = 136/532 (25%), Gaps = 144/532 (27%) Query: 228 IECGDSLDSINATSSAIVKYV--SQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHF 285 + GDS + ++ + + +N +R LGSP++ F +G P F Sbjct: 167 LVVGDSREGWAEAVKLFLELLGDRHVELLHVNLNSVRPLGSPLKRFGGFASGPGPLEDFF 226 Query: 286 QTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYT 345 A GG + T + L+V +L+ + R + G +K Sbjct: 227 LNAAFIL--GGTKPEGWT---DVKALDVANLIG-RMVVAGGTRRSAQISLGDWDSKNFIA 280 Query: 346 RLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQE 405 K + +P F Y K ++D + F ++Q Sbjct: 281 A--KTGNWWATAPWRAQSNNSVLF---------YAKPDRDTLLA--------FFDAVLQ- 320 Query: 406 RASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLS 465 G N R N C EI L K +C L+ Sbjct: 321 ---YGEPGFVNAQTA------LKRREDFRGVNPCSEILLRNK------------GVCNLT 359 Query: 466 AFNLGAI-----NNLDELEELAILAVRALDALLDYQDYP--IPAAKRGAMGRRTLGIGVI 518 L + LE+ L R + +P + +R R +G+ Sbjct: 360 TVVLPNHVRNGKVDYALLEDTLRLLTRHA-IRITTAQFPDVLSEWQRVQDEDRLIGVSFT 418 Query: 519 NFAYYLAKHGKRYSDGSANNLTHKTFEA-IQYYLLKASNELAKEQGACPWFNETTYAKGI 577 ++ G D A + + + S EL + Sbjct: 419 GLDDFIHLTGL---DNDALAKVLAWMRSVVNDEAKRYSAELGLPK--------------- 460 Query: 578 LPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637 L ++K G T S ++ ++G+ P Sbjct: 461 ----------------------PKLATTVKPEG-------------TLSLLAGVSSGVHP 485 Query: 638 PRGYVSIKASKDGILRQVVPDYEHLH-----------------DAYE---------LLWE 671 I+ + V L +E + Sbjct: 486 AYAPYYIRRVRINKHDSVAQALRALGMEPKPEVGYDSLDTADVWVFEFPVKTNAKRKAHD 545 Query: 672 MPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYK 723 + + + + + + S P ++++ LL + Sbjct: 546 YTAVEQLERYKLVNSVYTEHNTSITVYVAPEE-------KEEVVDWLLQNWD 590 >UniRef50_Q035U1 Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase n=16 Tax=Lactobacillus RepID=RTPR_LACC3 Length = 748 Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 70/547 (12%), Positives = 152/547 (27%), Gaps = 140/547 (25%) Query: 231 GDSLDSINATSSAIVKYVSQRAGIG------INAGRIRALGSPIRGGEAFHTGCIPFYKH 284 D+ + ++ ++ + ++ IR G+ I G +G +P + Sbjct: 228 PDTREGWVLANAKVIDHHFAATNPSGQTKLVLDITNIRPKGARIHGFGGTASGPMPLIEM 287 Query: 285 FQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMY 344 K + R G ++ +L+ K R M G ++ Sbjct: 288 LLDINKLLN---ARVGQHLTAVDA--TDIGNLIG-KTVVAGNVRRSAEMSLGSADDEDFI 341 Query: 345 TRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQ 404 T + + + ++ ++S+ + +S + Sbjct: 342 TMKQDQKQLY------------------------HHRWASNNSVAINTQ--FDAYSPIAL 375 Query: 405 ERASTGRIYIQNV----------DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND 454 A G I N+ D N + D V +N C EI+L Sbjct: 376 AIAKNGEPGIVNLELSRRFGRIADRENAENDPD-----VEGTNPCGEISLANGEP----- 425 Query: 455 ENGEIALCTLSAFN-LGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTL 513 C L + A+ +L++ LA R + + Y ++ R + Sbjct: 426 -------CNLFEVFPVVAVEQGWKLKQAFTLAARFAKRV-TFSHYDWQVSRDIIKKNRRI 477 Query: 514 GIGVINFAYYLAK-HGKR----YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWF 568 G+ + + G+R + + I +K + + G Sbjct: 478 GVSMSGIQDWFLNDFGRRVVSGFESVVDPQTGKMVQKPIYDPEIKQAVD-----GLY--- 529 Query: 569 NETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQI 628 +D + D + EP + + PS T +++ Sbjct: 530 --------HTVVDADQAYSDALGCEPSRK------------------HTTVKPSGTVAKL 563 Query: 629 SNATNGIEPPRGYVSIKASKDGILRQVVP-----DYEHLHDAYEL---LWEMPGNDGY-- 678 + + G+ I+ + ++P Y D Y + E P + Sbjct: 564 AGVSEGMHFHYAGYLIQRIRFQGNDPLLPALQACGYHIEPDVYTKGTMVVEFPIRAAHAD 623 Query: 679 ---------------LQLVGIMQK-FIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAY 722 + +Q + D ++S + P + LL+ Y Sbjct: 624 DPAFASAGTVSIAEQIATQAFLQTYWSDNAVSCTVTFQPKE--------ADQIAGLLSQY 675 Query: 723 KFGVKTL 729 + +K+ Sbjct: 676 RHVIKST 682 >UniRef50_C0Z7W9 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7W9_BREBN Length = 753 Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 53/367 (14%), Positives = 101/367 (27%), Gaps = 59/367 (16%) Query: 228 IECGDSLDSINATSSAIVKYVSQRAGIGIN-----AGRIRALGSPIRGGEAFHTGCIPFY 282 I GDS + + ++ ++ I+ +R G ++ +G P Sbjct: 201 IYVGDSKEGWVESLRLYLQILTDSTYEHIHTVKISYNSVRPKGERLKRFGGTASGHEPLR 260 Query: 283 KHFQTAVKS----CSQG-----GVRGGAATLFYPMWH-LEVESLLVLKNNRGVEGNRVRH 332 + F+ K Q G H L++ +L+ G Sbjct: 261 EMFEGIDKVLKNQIDQHLAPIESDEKGY--GKIRPIHILDIGNLIGANVVVGGVRRTAEI 318 Query: 333 MDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLY-----------TK 381 + + M + T + + + + + + Sbjct: 319 FLFDHDDYECMLAKYGINGFWTEDQLNHHRRVGELLGEHKPVWFDTIQNVGDGRVGLDHR 378 Query: 382 YEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLE 441 ++SI + +L+ G N++ N P N C E Sbjct: 379 RMSNNSIAFTKQPTKPFLNLVFTLMQLEGEPGFINLEEANRRRP------NAEGLNPCAE 432 Query: 442 IALPTKPLNDVNDENGEIALCTLSAFNL----------GAINNLDELEELAILAVRALDA 491 I L + +C L+ NL +LD L E + RA Sbjct: 433 ILLDS------------YGVCNLTTVNLVEFVKDRGDSSKYLDLDGLLEAQRKSARAGLR 480 Query: 492 LLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYL 551 + +P R LG + LA G Y++ L + +A + Sbjct: 481 MTLVT-LELPHWDTVQQRDRLLGTSLTGVKDALASLG--YTEEQELELLRQLGDAARDEA 537 Query: 552 LKASNEL 558 + + EL Sbjct: 538 NRYAYEL 544 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.135 0.367 Lambda K H 0.267 0.0414 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,249,332,522 Number of Sequences: 3077464 Number of extensions: 174790247 Number of successful extensions: 497597 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 684 Number of HSP's successfully gapped in prelim test: 225 Number of HSP's that attempted gapping in prelim test: 490710 Number of HSP's gapped (non-prelim): 1735 length of query: 761 length of database: 1,040,396,356 effective HSP length: 137 effective length of query: 624 effective length of database: 618,783,788 effective search space: 386121083712 effective search space used: 386121083712 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 97 (42.0 bits)