Phyre 2 alignment of P00452 with c2p6uA_

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Job Description | P00452
Confidence | 5.66% | Date | Thu Jan 5 10:56:38 GMT 2012
Rank | 95 | Aligned Residues | 25
% Identity | 36% | Template | c2p6uA_
PDB info | PDB header:dna binding protein | Chain: A: PDB Molecule:afuhel308 helicase; | PDBTitle: apo structure of the hel308 superfamily 2 helicase
Resolution | 3.14 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 600 | . | . | . | . | . | . | . | . | . | 610 | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | 620 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | A | L | R | E | S | I | K | T | H | G | L | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | R | N | S | T | L | S | A | L | M | P | S | E | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | E | L | A | E | S | I | S | S | Y | A | V | G | I | L | F | P | P | Q | A | E | A | V | E | K | V | F | S | G | K | N | L | L | L | A | M | P | T | A | A
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  | S | S | T |  |  |  |  |  |  | T | T |  | S |  |  |  |  |  |  | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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