Phyre 2 alignment of P00452 with c3pg6D_

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Job Description | P00452
Confidence | 14.54% | Date | Thu Jan 5 10:56:38 GMT 2012
Rank | 28 | Aligned Residues | 33
% Identity | 15% | Template | c3pg6D_
PDB info | PDB header:ligase | Chain: D: PDB Molecule:e3 ubiquitin-protein ligase dtx3l; | PDBTitle: the carboxyl terminal domain of human deltex 3-like
Resolution | 1.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 686 | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | K | F | I | D | Q | S | I | S | A | N | T | N | Y | D | P | S | R | F | P | S | G | K | V | P | M | Q | Q | L | L | K | D | L | L | T | A | Y | K | F | G | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | R | Y | . | . | P | G | I | Q | R | T | A | Y | L | . | . | . | . | . | . | P | D | N | K | E | G | R | K | V | L | K | L | L | Y | R | A | F | D | Q | K | L
Template Known Secondary structure |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 653 | . | . |  |  | . | . | . | . | 660 | . | . | . | . |  |  |  |  |  |  | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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