Phyre 2 alignment of P00452 with c2dwuA_

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Job Description | P00452
Confidence | 5.77% | Date | Thu Jan 5 10:56:38 GMT 2012
Rank | 87 | Aligned Residues | 41
% Identity | 15% | Template | c2dwuA_
PDB info | PDB header:isomerase | Chain: A: PDB Molecule:glutamate racemase; | PDBTitle: crystal structure of glutamate racemase isoform race1 from bacillus2 anthracis
Resolution | 1.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 509 | 510 | . | . | . | . | . |  |  |  |  |  |  | . | . | . | . | 520 | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | R | R | T | L | G | I | . | . | . | . | . | . | G | V | I | N | F | A | Y | Y | L | A | K | H | . | . | . | . | . | . | . | . | . | . | . | . | G | K | R | Y | S | D | G | S | A | N | N | L | T | H | K | T | F | E | A | I | Q | Y
Query Conservation |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | H | S | V | I | G | V | L | D | S | G | V | G | G | L | T | V | A | S | E | I | I | R | Q | L | P | K | E | S | I | C | Y | I | G | D | N | E | R | C | P | Y | G | P | R | S | V | E | E | V | Q | S | F | V | F | E | M | V | E | F
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | S | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  | G | G | G |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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