163 c1ltxR_ Probab=99.25   E-value=9.6e-11  Score=87.48  Aligned_columns=196  Identities=12%

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCC-CEEEEECCCCCCCHHHC-----------------------------------
Q ss_conf             653346889989589999999998669-79999889878830210-----------------------------------
Q batch____         5 PEHSCDVLIIGSGAAGLSLALRLADQH-QVIVLSKGPVTEGSTFY-----------------------------------   48 (540)
Q Consensus         5 ~d~~~DVlVIG~G~AGl~AA~~Aae~G-~V~vvek~~~~gg~s~~-----------------------------------   48 (540)
                      +..+|||+|||+|+|||+||+.+++.| +|+|+|+.+..||.+.-                                   
T Consensus         4 ~p~~~DVvVIGaG~aGL~aA~~La~~G~~V~vlEa~~~~GG~~~s~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   83 (494)
T c1ltxR_           4 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENTENSMWQEQILENEEAIPL   83 (494)
T ss_dssp             CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHTTTCCCCCCCGGGGSCTTEEEEEB
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             67437889998988899999999987980999967889971279985277043214632256542122222344200113


Q ss_pred             --------------------------------CCCCCCCCCCCCCCHHHHHHHHHHHC----------------------
Q ss_conf             --------------------------------46852245775579899999999861----------------------
Q batch____        49 --------------------------------AQGGIAAVFDETDSIDSHVEDTLIAG----------------------   74 (540)
Q Consensus        49 --------------------------------s~ggi~~~~~~~ds~e~~~~d~~~~g----------------------   74 (540)
                                                      ....+.............+..+.+.+                      
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (494)
T c1ltxR_          84 SSKDKTIQHVEVFCYASQDKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVE  163 (494)
T ss_dssp             CSSCCCEEEEEEEECSTTCCCCCCHHHHHHTGGGCCEESSCCCEETTSHHHHHHHHHTGGGGCCEEEEEEEEEEETTEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHH
T ss_conf             32233333233111146555431222321101002333121344401488897644285655655644421020014021


Q ss_pred             -------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCC
Q ss_conf             -------------------------------------------7898989999999847999999998798011255555
Q batch____        75 -------------------------------------------AGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPN  111 (540)
Q Consensus        75 -------------------------------------------~~~~d~~lv~~~~~~~~~~i~~L~~~Gv~f~~~~~~~  111 (540)
                                                                 ....=.++++.+. .++...+.+.....-+.......
T Consensus       164 ~~p~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~  242 (494)
T c1ltxR_         164 QVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQK-LTPNLQYFVLHSIAMTSTSCTVD  242 (494)
T ss_dssp             ECCCSHHHHHHCSSSCHHHHHHHHHHHHHHTTGGGCGGGTGGGTTSBHHHHHHHSS-CCHHHHHHHHTTTSCCCCCBHHH
T ss_pred             HCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHC-CCHHHHHHHHHHHHHCCCCCCHH
T ss_conf             14589678721656430344434567777523566758864321596889998838-99999999999997514788247


Q ss_pred             CCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCEEECCCEEECCEEEECCCCE
Q ss_conf             55541232347603252121377652789999999998618967995324678888178322002013012012147973
Q batch____       112 GEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERSNAVDLIVSDKIGLPGTRRVVGAWVWNRNKET  191 (540)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~i~~~~~v~~Li~~~g~~~~~~~~~~G~~~~~~~~~~  191 (540)
                      .........................|...+...+.+.++..|++|..+++|+.+.++..          +..........
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~Gg~i~l~~~V~~I~~~~~----------~~~~~~v~~~~  312 (494)
T c1ltxR_         243 GLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKE----------SRKCKAVIDQF  312 (494)
T ss_dssp             HHHHHHHHHTTTTSSSSSSEEEETTCTTHHHHHHHHHHHHTTCEEETTCCEEEEEEETT----------TCCEEEEEETT
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCC----------CCEEEEEEECC
T ss_conf             99999999999653066855886488789999999997404870883042269998388----------97699999379


Q ss_pred             EEEEECCCCEECCCCCCCCC
Q ss_conf             99995698120588642110
Q batch____       192 VETCHAKAVVLATGGASKVY  211 (540)
Q Consensus       192 ~~~i~A~~VIlAtGG~~~~~  211 (540)
                      -.++.|+.||+++.-.....
T Consensus       313 g~~~~a~~VI~a~~~~~~~~  332 (494)
T c1ltxR_         313 GQRIISKHFIIEDSYLSENT  332 (494)
T ss_dssp             CCEEECSEEEEEGGGBCTTT
T ss_pred             CCEEEECEEEECCCCCCHHH
T ss_conf             83999078998684036364