BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (298 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P52044 Uncharacterized HTH-type transcriptional regulat... 620 e-176 UniRef50_A7MHR6 Putative uncharacterized protein n=2 Tax=Enterob... 73 1e-11 UniRef50_A7FDT2 Transcriptional regulator, LysR family n=28 Tax=... 70 1e-10 UniRef50_A4TPK6 LysR-family transcriptional regulatory protein n... 70 1e-10 UniRef50_B4S1E1 Regulatory protein, LysR:LysR, substrate-binding... 66 1e-09 UniRef50_A1W235 Transcriptional regulator, LysR family n=6 Tax=B... 66 1e-09 UniRef50_Q12DJ6 Transcriptional regulator, LysR family n=3 Tax=C... 65 3e-09 UniRef50_A8KZ10 Transcriptional regulator, LysR family n=3 Tax=A... 65 4e-09 UniRef50_Q6FDZ3 Putative transcriptional regulator n=1 Tax=Acine... 65 4e-09 UniRef50_D2U2S5 LysR family transcriptional regulator n=1 Tax=Ar... 64 5e-09 UniRef50_C9PI61 Transcriptional regulator n=1 Tax=Vibrio furniss... 64 6e-09 UniRef50_Q2IPS6 Transcriptional regulator, LysR family n=4 Tax=A... 64 6e-09 UniRef50_C2EGI9 LysR family transcriptional regulator n=1 Tax=La... 64 7e-09 UniRef50_C9PA71 Transcriptional regulators LysR family n=1 Tax=V... 64 8e-09 UniRef50_B9IRL1 HTH_1, Bacterial regulatory helix-turn-helix pro... 64 9e-09 UniRef50_B6VL02 Putative lysr-family transcriptional regulatory ... 64 9e-09 UniRef50_D0LCK3 Regulatory protein LysR n=1 Tax=Gordonia bronchi... 63 1e-08 UniRef50_B6VNM5 Putative lysR-family transcriptional regulatory ... 63 1e-08 UniRef50_C7N3H6 Transcriptional regulator n=1 Tax=Slackia heliot... 62 2e-08 UniRef50_C3I9W8 HTH-type transcriptional regulator alsR n=1 Tax=... 62 2e-08 UniRef50_C3AN59 Transcriptional regulator, LysR n=4 Tax=Bacilli ... 62 2e-08 UniRef50_Q93EP7 TciR2 n=1 Tax=Photorhabdus luminescens RepID=Q93... 62 3e-08 UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Ta... 62 3e-08 UniRef50_C0X651 LysR family transcriptional regulator n=19 Tax=E... 62 3e-08 UniRef50_Q3A2J2 Transcriptional regulator, LysR family n=2 Tax=P... 62 3e-08 UniRef50_A9MK22 Putative uncharacterized protein n=1 Tax=Salmone... 61 5e-08 UniRef50_P24417 Virulence genes transcriptional activator n=15 T... 61 6e-08 UniRef50_UPI00019735EF LysR family transcriptional regulator n=1... 60 6e-08 UniRef50_C9KMN5 Transcriptional regulator, LysR family n=1 Tax=M... 60 7e-08 UniRef50_B4SNU6 Transcriptional regulator, LysR family n=1 Tax=S... 60 7e-08 UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=un... 60 8e-08 UniRef50_B9Z4I9 Transcriptional regulator, LysR family n=1 Tax=L... 60 8e-08 UniRef50_Q7NTJ3 Probable transcriptional regulator, LysR family ... 60 8e-08 UniRef50_UPI0001973C57 transcriptional regulator, LysR family pr... 60 9e-08 UniRef50_A6CQJ0 Transcriptional regulator n=1 Tax=Bacillus sp. S... 60 1e-07 UniRef50_A1W2J2 Transcriptional regulator, LysR family n=25 Tax=... 60 1e-07 UniRef50_B7S107 Putative lysR substrate binding domain protein n... 60 1e-07 UniRef50_Q8GF96 TciR1 n=3 Tax=Photorhabdus luminescens RepID=Q8G... 60 1e-07 UniRef50_Q3IFU9 Putative bacterial regulatory protein LysR Famil... 60 1e-07 UniRef50_A6FD49 Transcriptional regulator n=1 Tax=Moritella sp. ... 59 1e-07 UniRef50_C0D3N8 Putative uncharacterized protein n=2 Tax=Clostri... 59 1e-07 UniRef50_UPI0001C36E54 transcription regulator n=1 Tax=Ruminococ... 59 1e-07 UniRef50_B8IDW8 Transcriptional regulator, LysR family n=1 Tax=M... 59 1e-07 UniRef50_B0A6J5 Putative uncharacterized protein n=1 Tax=Clostri... 59 2e-07 UniRef50_Q7WMW6 Putative LysR-family transcriptional regulator n... 59 2e-07 UniRef50_C8QBP2 Transcriptional regulator, LysR family n=1 Tax=P... 59 2e-07 UniRef50_A0QT15 Transcriptional regulator, LysR family protein n... 59 2e-07 UniRef50_Q984W9 Transcriptional regulator n=2 Tax=Mesorhizobium ... 59 2e-07 UniRef50_D1W106 LysR substrate binding domain protein n=1 Tax=Pr... 59 2e-07 UniRef50_C4DFU1 Transcriptional regulator, COG0583 n=1 Tax=Stack... 59 2e-07 UniRef50_O50643 SalR n=1 Tax=Pseudomonas putida RepID=O50643_PSEPU 59 3e-07 UniRef50_C3BCJ4 Transcriptional regulator LysR n=1 Tax=Bacillus ... 59 3e-07 UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding... 59 3e-07 UniRef50_C6WEH4 Transcriptional regulator, LysR family n=1 Tax=A... 59 3e-07 UniRef50_A9C079 Transcriptional regulator, LysR family n=2 Tax=B... 59 3e-07 UniRef50_B5EJJ4 Transcriptional regulator, LysR family n=3 Tax=A... 59 3e-07 UniRef50_A6UB72 Transcriptional regulator, LysR family n=1 Tax=S... 59 3e-07 UniRef50_C6DBU7 Transcriptional regulator, LysR family n=4 Tax=P... 58 3e-07 UniRef50_D2SB86 Transcriptional regulator, LysR family n=3 Tax=A... 58 3e-07 UniRef50_C9KLE6 Putative LysR substrate binding domain protein n... 58 3e-07 UniRef50_C8NSG7 LysR family bacterial regulatory protein n=4 Tax... 58 3e-07 UniRef50_C4DCW0 Transcriptional regulator, COG0583 n=1 Tax=Stack... 58 4e-07 UniRef50_B6WRH5 Putative uncharacterized protein n=1 Tax=Desulfo... 58 4e-07 UniRef50_Q3IZR2 Transcriptional regulator, LysR family n=4 Tax=R... 58 4e-07 UniRef50_Q02SX9 Possible LysR family transcription regulator n=6... 58 4e-07 UniRef50_D0ZD32 Transcriptional regulator, LysR family n=4 Tax=P... 58 4e-07 UniRef50_A6B948 Transcriptional regulator n=6 Tax=Vibrio RepID=A... 58 4e-07 UniRef50_C0AR12 Putative uncharacterized protein n=1 Tax=Proteus... 58 5e-07 UniRef50_A9WDF5 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 58 5e-07 UniRef50_C1SL97 Transcriptional regulator, COG0583 n=1 Tax=Denit... 58 5e-07 UniRef50_D1Y5H7 Transcriptional regulator, LysR family n=1 Tax=P... 58 5e-07 UniRef50_A5VK31 Transcriptional regulator, LysR family n=14 Tax=... 58 5e-07 UniRef50_Q13PS6 Transcriptional regulator, LysR family n=36 Tax=... 57 5e-07 UniRef50_B2TMS2 Transcriptional regulator, LysR family n=3 Tax=C... 57 6e-07 UniRef50_C8NRP5 Transcription regulator n=2 Tax=Corynebacterium ... 57 6e-07 UniRef50_C0BY92 Putative uncharacterized protein n=5 Tax=Firmicu... 57 6e-07 UniRef50_Q65SQ8 LysR protein n=7 Tax=Pasteurellaceae RepID=Q65SQ... 57 7e-07 UniRef50_C6JG59 Putative uncharacterized protein n=1 Tax=Ruminoc... 57 7e-07 UniRef50_D0L5B8 LysR substrate-binding protein n=1 Tax=Gordonia ... 57 7e-07 UniRef50_A6EE41 Transcriptional regulator, LysR family protein n... 57 8e-07 UniRef50_A0QSQ3 LysR-family protein trancsriptional regulator n=... 57 9e-07 UniRef50_C0CUW8 Putative uncharacterized protein n=1 Tax=Clostri... 57 9e-07 UniRef50_A9BPG7 Transcriptional regulator, LysR family n=1 Tax=D... 57 9e-07 UniRef50_D2B6U1 DNA-binding transcriptional regulator CynR n=1 T... 57 9e-07 UniRef50_Q21FK9 Transcriptional regulator, LysR family n=1 Tax=S... 57 9e-07 UniRef50_A9HWS3 Transcriptional regulator, LysR-family n=8 Tax=B... 57 9e-07 UniRef50_UPI0001973473 transcriptional regulator, LysR family pr... 57 9e-07 UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=... 57 9e-07 UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=E... 57 1e-06 UniRef50_A1S338 Transcriptional regulator, LysR family n=16 Tax=... 57 1e-06 UniRef50_A1WN40 Transcriptional regulator, LysR family n=1 Tax=V... 57 1e-06 UniRef50_Q0RY04 Transcriptional regulator, LysR family protein n... 57 1e-06 UniRef50_Q7W5S7 LysR-family transcriptional regulator n=3 Tax=Bo... 56 1e-06 UniRef50_A8GBI4 Transcriptional regulator, LysR family n=4 Tax=G... 56 1e-06 UniRef50_C5EF34 Transcriptional regulator n=1 Tax=Clostridiales ... 56 1e-06 UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=B... 56 1e-06 UniRef50_Q0K3L0 Transcriptional regulator, LysR-family n=2 Tax=P... 56 1e-06 UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepI... 56 1e-06 UniRef50_P52670 HTH-type transcriptional regulator ilvR n=98 Tax... 56 1e-06 UniRef50_D2T733 Transcriptional regulator of levansucrase n=5 Ta... 56 1e-06 UniRef50_B8CTJ9 Regulatory protein, LysR:LysR, substrate-binding... 56 1e-06 UniRef50_B2TCR3 Transcriptional regulator, LysR family n=3 Tax=B... 56 1e-06 UniRef50_C6B9Q5 Transcriptional regulator, LysR family n=3 Tax=R... 56 1e-06 UniRef50_A8LUJ1 Transcriptional regulator, LysR family n=3 Tax=R... 56 2e-06 UniRef50_C9PJ12 Putative transcriptional regulator protein n=1 T... 56 2e-06 UniRef50_Q12DG5 Transcriptional regulator, LysR family n=1 Tax=P... 56 2e-06 UniRef50_A5ET16 Putative transcriptional regulator n=1 Tax=Brady... 56 2e-06 UniRef50_A0KIU1 Transcriptional regulator, LysR family n=3 Tax=A... 56 2e-06 UniRef50_UPI00016945D8 transcriptional regulator, LysR family pr... 56 2e-06 UniRef50_Q0RGI7 Putative uncharacterized protein n=1 Tax=Frankia... 56 2e-06 UniRef50_C1D6W2 Probable transcriptional regulator, LysR family ... 56 2e-06 UniRef50_A4NT13 LysR protein n=6 Tax=Proteobacteria RepID=A4NT13... 56 2e-06 UniRef50_B8IFG1 Transcriptional regulator, LysR family n=5 Tax=A... 56 2e-06 UniRef50_B8CIE9 Regulatory protein, LysR:LysR, substrate-binding... 56 2e-06 UniRef50_A8GJH0 Transcriptional regulator, LysR family n=6 Tax=E... 55 2e-06 UniRef50_A0P0H4 Transcriptional regulator, LysR family protein n... 55 2e-06 UniRef50_C0ZAD7 Transcriptional regulator n=1 Tax=Brevibacillus ... 55 2e-06 UniRef50_C9RY94 Transcriptional regulator, LysR family n=8 Tax=B... 55 2e-06 UniRef50_Q13JN6 Transcriptional regulator, LysR family n=7 Tax=B... 55 2e-06 UniRef50_A9AUC8 Transcriptional regulator, LysR family n=2 Tax=C... 55 2e-06 UniRef50_A9BPP0 Transcriptional regulator, LysR family n=8 Tax=c... 55 2e-06 UniRef50_B5JK93 Putative uncharacterized protein n=1 Tax=Verruco... 55 2e-06 UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=M... 55 2e-06 UniRef50_A9ANF4 LysR family transcriptional regulator n=8 Tax=Pr... 55 2e-06 UniRef50_A8GI93 Transcriptional regulator, LysR family n=3 Tax=E... 55 3e-06 UniRef50_B4SSK9 Transcriptional regulator, LysR family n=3 Tax=S... 55 3e-06 UniRef50_D1PLB5 Transcriptional regulator, LysR family n=1 Tax=S... 55 3e-06 UniRef50_Q2G7Q5 Transcriptional regulator, LysR family n=1 Tax=N... 55 3e-06 UniRef50_Q0AK17 Transcriptional regulator, LysR family n=3 Tax=B... 55 3e-06 UniRef50_Q3K7P5 LysR family regulatory protein n=7 Tax=Pseudomon... 55 3e-06 UniRef50_A6F002 Transcriptional regulator, LysR family protein n... 55 3e-06 UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=C... 55 3e-06 UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=T... 55 3e-06 UniRef50_B1ZQE5 Transcriptional regulator, LysR family n=1 Tax=O... 55 3e-06 UniRef50_C5EG08 Regulatory protein n=1 Tax=Clostridiales bacteri... 55 3e-06 UniRef50_C6C1H7 Transcriptional regulator, LysR family n=1 Tax=D... 55 4e-06 UniRef50_A5WF28 Transcriptional regulator, LysR family n=1 Tax=P... 55 4e-06 UniRef50_A1B7J2 Transcriptional regulator, LysR family n=4 Tax=A... 55 4e-06 UniRef50_D0J1D7 Transcriptional regulator, LysR family n=12 Tax=... 55 4e-06 UniRef50_A1ZQK8 LysR substrate binding domain, putative n=1 Tax=... 55 4e-06 UniRef50_C8YX91 DddZ n=1 Tax=Halomonas sp. HTNK1 RepID=C8YX91_9GAMM 55 4e-06 UniRef50_A6VZS6 Transcriptional regulator, LysR family n=4 Tax=G... 54 4e-06 UniRef50_A1WPC1 Transcriptional regulator n=1 Tax=Verminephrobac... 54 4e-06 UniRef50_UPI00017889E9 transcriptional regulator, LysR family n=... 54 4e-06 UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=A... 54 4e-06 UniRef50_D1BQV4 Transcriptional regulator, LysR family n=3 Tax=V... 54 5e-06 UniRef50_C5CWH5 Transcriptional regulator, LysR family n=1 Tax=V... 54 5e-06 UniRef50_UPI0001C36873 transcriptional regulator n=1 Tax=Clostri... 54 5e-06 UniRef50_B0CAU2 Transcriptional regulator, LysR family n=1 Tax=A... 54 5e-06 UniRef50_A7GMD6 Transcriptional regulator, LysR family n=3 Tax=B... 54 5e-06 UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=... 54 5e-06 UniRef50_A6VSP2 Transcriptional regulator, LysR family n=1 Tax=M... 54 5e-06 UniRef50_C8T509 Putative uncharacterized protein (Fragment) n=1 ... 54 5e-06 UniRef50_Q7WNK0 LysR-family transcriptional regulator n=1 Tax=Bo... 54 5e-06 UniRef50_A9FZI9 Transcriptional regulator, LysR family n=6 Tax=B... 54 5e-06 UniRef50_B9JT77 Transcriptional regulator LysR family n=2 Tax=Ag... 54 6e-06 UniRef50_C9KL67 Transcriptional regulator, LysR family n=2 Tax=V... 54 6e-06 UniRef50_Q1V682 Putative transcriptional regulator protein n=1 T... 54 6e-06 UniRef50_C6D158 Transcriptional regulator, LysR family n=1 Tax=P... 54 6e-06 UniRef50_A6FDC4 Putative uncharacterized protein n=1 Tax=Moritel... 54 6e-06 UniRef50_Q7W708 Putative LysR-family transcriptional regulator n... 54 6e-06 UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax... 54 6e-06 UniRef50_A1TDP3 Transcriptional regulator, LysR family n=1 Tax=M... 54 7e-06 UniRef50_A1JI47 HTH-type transcriptional regulator hdfR n=161 Ta... 54 7e-06 UniRef50_B7X4Z6 Transcriptional regulator, LysR family n=2 Tax=B... 54 7e-06 UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Provide... 54 7e-06 UniRef50_D0LTU8 Transcriptional regulator, LysR family n=1 Tax=H... 54 7e-06 UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=... 54 7e-06 UniRef50_B9YAT6 Putative uncharacterized protein n=1 Tax=Holdema... 54 7e-06 UniRef50_D2NU85 Transcriptional regulator n=1 Tax=Rothia mucilag... 54 7e-06 UniRef50_A3VLI0 Transcriptional regulator, LysR family protein n... 54 7e-06 UniRef50_B7WRI3 Transcriptional regulator, LysR family n=1 Tax=C... 54 7e-06 UniRef50_C0VLJ0 Transcriptional regulator n=4 Tax=Acinetobacter ... 54 7e-06 UniRef50_Q1IBR2 Putative transcriptional regulator, LysR family ... 54 7e-06 UniRef50_B5XZ27 Transcriptional regulator, LysR family n=6 Tax=E... 54 7e-06 UniRef50_UPI0001A435D5 LysR family transcriptional regulator n=1... 54 8e-06 UniRef50_C3RQY6 Transcription regulator n=2 Tax=Bacteria RepID=C... 54 8e-06 UniRef50_A0RQT9 Transcriptional regulator, LysR family n=2 Tax=C... 54 8e-06 UniRef50_D1SY05 Transcriptional regulator, LysR family n=1 Tax=A... 54 8e-06 UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Ge... 54 8e-06 UniRef50_C1XGE6 Transcriptional regulator, COG0583 n=2 Tax=Meiot... 54 8e-06 UniRef50_D2MMC0 Transcriptional regulator, LysR family n=1 Tax=B... 54 8e-06 UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=... 54 8e-06 UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Az... 54 9e-06 UniRef50_UPI000197C658 DNA-binding transcriptional activator All... 54 9e-06 UniRef50_Q0JZC7 Transcriptional regulator, LysR-family n=4 Tax=B... 54 9e-06 UniRef50_B0G212 Putative uncharacterized protein n=4 Tax=Firmicu... 54 9e-06 UniRef50_Q07WR2 Transcriptional regulator, LysR family protein n... 54 9e-06 UniRef50_C4V240 Possible transcriptional regulator n=2 Tax=Selen... 54 1e-05 UniRef50_C3JEG8 Transcriptional regulator, LysR family protein n... 54 1e-05 UniRef50_C5CMH8 Transcriptional regulator, LysR family n=2 Tax=c... 54 1e-05 UniRef50_C9PDK5 Transcriptional regulator LysR family n=1 Tax=Vi... 54 1e-05 UniRef50_C4XRX4 LysR family transcriptional regulator n=2 Tax=De... 53 1e-05 UniRef50_A3VLR4 Putative LysR family transcriptional regulator n... 53 1e-05 UniRef50_D1SIQ8 Transcriptional regulator, LysR family n=8 Tax=A... 53 1e-05 UniRef50_A1K2Y9 Probable transcriptional regulator, LysR family ... 53 1e-05 UniRef50_P20667 HTH-type transcriptional regulator catR n=15 Tax... 53 1e-05 UniRef50_B1KCH9 Transcriptional regulator, LysR family n=2 Tax=B... 53 1e-05 UniRef50_C6R210 Transcriptional regulator, LysR family n=1 Tax=R... 53 1e-05 UniRef50_A9CF77 Transcriptional regulator, LysR family n=1 Tax=A... 53 1e-05 UniRef50_C0AC14 Transcriptional regulator, LysR family n=1 Tax=O... 53 1e-05 UniRef50_Q2SMV2 Transcriptional regulator n=1 Tax=Hahella chejue... 53 1e-05 UniRef50_A9F0H5 Transcriptional regulator, LysR family n=1 Tax=S... 53 1e-05 UniRef50_C4DN91 Transcriptional regulator, COG0583 n=2 Tax=Actin... 53 1e-05 UniRef50_A7JYF0 Transcriptional regulator n=63 Tax=Gammaproteoba... 53 1e-05 UniRef50_C4LCI2 Transcriptional regulator, LysR family n=1 Tax=T... 53 1e-05 UniRef50_UPI0001BC317C transcription regulator n=1 Tax=Butyrivib... 53 1e-05 UniRef50_C7LNY2 Transcriptional regulator, LysR family n=1 Tax=D... 53 1e-05 UniRef50_D1UBT8 Transcriptional regulator, LysR family n=1 Tax=D... 53 1e-05 UniRef50_C9YZ24 Putative LysR-family transcriptional regulator n... 53 1e-05 UniRef50_D2R7I4 Transcriptional regulator, LysR family n=6 Tax=P... 53 1e-05 UniRef50_Q141B1 Transcriptional regulator, LysR family n=1 Tax=B... 53 1e-05 UniRef50_Q9RYH7 Transcriptional regulator, HTH_1 family n=2 Tax=... 53 1e-05 UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=C... 53 1e-05 UniRef50_A8PQG2 Transcriptional regulator, LysR family n=1 Tax=R... 53 1e-05 UniRef50_A7H0A5 Transcriptional regulator, LysR family n=1 Tax=C... 53 1e-05 UniRef50_C5EFB6 HTH-type transcriptional regulator gltC n=1 Tax=... 53 1e-05 UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=C... 53 1e-05 UniRef50_Q1N3G7 Transcriptional activator IlvY n=2 Tax=Gammaprot... 53 1e-05 UniRef50_C8WLG5 Transcriptional regulator, LysR family n=1 Tax=E... 53 1e-05 UniRef50_A8G944 Transcriptional regulator, LysR family n=8 Tax=E... 53 1e-05 UniRef50_C7N4F3 Transcriptional regulator n=1 Tax=Slackia heliot... 53 1e-05 UniRef50_A9HWY9 Transcriptional regulator, LysR-family n=5 Tax=B... 53 1e-05 UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Ba... 53 1e-05 UniRef50_Q0KB06 Transcriptional regulator, LysR-family n=8 Tax=P... 53 1e-05 UniRef50_C5D044 Transcriptional regulator, LysR family n=1 Tax=V... 53 1e-05 UniRef50_C4GLH6 Putative uncharacterized protein n=1 Tax=Kingell... 53 1e-05 UniRef50_C1D646 Probable transcription regulator protein n=1 Tax... 53 1e-05 UniRef50_D1THU2 Regulatory protein, LysR:LysR, substrate-binding... 53 1e-05 UniRef50_D0XU83 Transcriptional regulator, LysR family n=1 Tax=C... 53 1e-05 UniRef50_P77744 HTH-type transcriptional regulator abgR n=48 Tax... 53 1e-05 UniRef50_A4BKQ2 Transcriptional regulator, LysR family protein n... 53 2e-05 UniRef50_A4FAR0 Transcriptional regulator n=4 Tax=Actinomycetale... 53 2e-05 UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=R... 53 2e-05 UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=M... 53 2e-05 UniRef50_B4W867 LysR substrate binding domain protein n=1 Tax=Br... 53 2e-05 UniRef50_B9YAK9 Putative uncharacterized protein n=1 Tax=Holdema... 53 2e-05 UniRef50_A6W215 Transcriptional regulator, LysR family n=1 Tax=M... 52 2e-05 UniRef50_A6TUW4 Transcriptional regulator, LysR family n=1 Tax=A... 52 2e-05 UniRef50_A9I640 Transcriptional regulator, LysR-family n=4 Tax=B... 52 2e-05 UniRef50_C6B6X6 Transcriptional regulator, LysR family n=1 Tax=R... 52 2e-05 UniRef50_Q03CT2 Fhu operon transcription regulator n=4 Tax=Lacto... 52 2e-05 UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter fo... 52 2e-05 UniRef50_A3QJ73 Transcriptional regulator, LysR family n=10 Tax=... 52 2e-05 UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bo... 52 2e-05 UniRef50_Q6FEW5 Putative transcriptional regulator n=1 Tax=Acine... 52 2e-05 UniRef50_A8SQI2 Putative uncharacterized protein n=1 Tax=Coproco... 52 2e-05 UniRef50_Q13T34 Transcriptional regulator, LysR family n=60 Tax=... 52 2e-05 UniRef50_C6CDU8 Transcriptional regulator, LysR family n=1 Tax=D... 52 2e-05 UniRef50_C9YBU0 Putative uncharacterized protein n=1 Tax=Curviba... 52 2e-05 >UniRef50_P52044 Uncharacterized HTH-type transcriptional regulator ygfI n=57 Tax=Bacteria RepID=YGFI_ECOLI Length = 298 Score = 620 bits (1598), Expect = e-176, Method: Compositional matrix adjust. Identities = 298/298 (100%), Positives = 298/298 (100%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL Sbjct: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG 120 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG Sbjct: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE Sbjct: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF Sbjct: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH 298 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH Sbjct: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH 298 >UniRef50_A7MHR6 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A7MHR6_ENTS8 Length = 296 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 7/127 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ ISKK++ FI+ + I AAE++ +T SP + I +EE++G LF RK N + Sbjct: 2 MNLLISKKLKYFIVCFEAKCINSAAEQLCVTRSPLARVIYEMEEKMGGKLFIRKYNYLEP 61 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTIIFDQLISLGDKYE 119 + LY+K+ PVY L +I+N+ S + SR E++ I + P +I+ ++S K Sbjct: 62 TELAITLYEKIKPVYDLLYSIENDFSISAKCSRFELLCDI--SVPLVIYQHILSWQKK-- 117 Query: 120 GVTAQPV 126 T QPV Sbjct: 118 --TNQPV 122 >UniRef50_A7FDT2 Transcriptional regulator, LysR family n=28 Tax=Yersinia RepID=A7FDT2_YERP3 Length = 295 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 30/201 (14%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 +FISK + F Q ++ AA K+ T P +S+ LEE++G+ LFTR + + L Sbjct: 1 MFISKNLLVFFTTVQEGSLTNAAMKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTL 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGI-----DNTYPTIIFDQLISLGDK 117 G YQ+++P Y RL+ EI + ++++ +I I ++ + +I D I G Sbjct: 61 EGAAFYQEIYPTYVRLT----EITKNYKKNKNGIINIATYQMNSLHAGVICDYFIKKG-- 114 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSA---RVQELENLTISELPPLRLGFL 174 +E EN ID++ Q+D +IS + + V+ N S L L L Sbjct: 115 -----ILNIELREN--IDDV--SQMDIVISTKEIKGYDFDVELTANCKTSLLYATYLNNL 165 Query: 175 VSRRYEERQEQELLQELPWLQ 195 +++ E L++LP++Q Sbjct: 166 PNKK-------EYLKKLPFIQ 179 >UniRef50_A4TPK6 LysR-family transcriptional regulatory protein n=23 Tax=Yersinia RepID=A4TPK6_YERPP Length = 303 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 51/83 (61%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + +SK +R FI+ AQ +I AA+K+ +TASP ++I LE ++G LFTR I L Sbjct: 2 LLLSKSLRYFIITAQKESITLAADKLCITASPLSRNIKELEMKLGCELFTRTSKGILLTS 61 Query: 63 AGQELYQKLFPVYQRLSAIDNEI 85 +G LY K+ PVY + ++ E+ Sbjct: 62 SGHFLYDKIIPVYNEIIELEKEL 84 >UniRef50_B4S1E1 Regulatory protein, LysR:LysR, substrate-binding n=2 Tax=Alteromonas macleodii RepID=B4S1E1_ALTMD Length = 296 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 3/185 (1%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 F L+A+ +IA+AA+ +H+T ++ E Q+GY LF R + + LN G+ YQ Sbjct: 12 FYLVAREGSIAKAAKLLHVTPQTVSGQLSTFENQLGYALFDRINKRLYLNARGKVTYQYA 71 Query: 72 FPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIF-DQLISLGDKYEGVTAQPVEFS 129 ++ + + + ++NS ++E VIGI N P ++F D + + ++ V E S Sbjct: 72 SEIFHKGNQLAEILNNSDEVNTKEFVIGITNGIPKVLFYDFVHDIMRRFSHVKYVIKEDS 131 Query: 130 ENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQELLQ 189 +G++ L +DFI++ + ++ Q N L F S EE+ + L Sbjct: 132 FDGLLKELAINAIDFIVADRGIAPGTQISANSFFLGESSLSF-FAKSPLSEEQTFPDCLN 190 Query: 190 ELPWL 194 ++P L Sbjct: 191 QMPLL 195 >UniRef50_A1W235 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A1W235_ACISJ Length = 309 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 8/142 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ F+ LA+T N RAAE++HM P SI LEE++G LF R + L AG+ Sbjct: 4 RQLSQFVALAETGNFHRAAERLHMAQPPLSVSIRKLEEELGSPLFERTTTGVVLTPAGEA 63 Query: 67 LY----QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 + + LF Q A+ + G R +IG TY + QLI SL +Y + Sbjct: 64 MLGDARRALFHAQQCRQAVQDAREGEGGLLRLGIIG-SATY--ALLPQLIPSLRQRYPQI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLD 143 + E + + +++ L R+ D Sbjct: 121 ELELSEATSSEILEGLVSRRFD 142 >UniRef50_Q12DJ6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q12DJ6_POLSJ Length = 300 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/307 (23%), Positives = 131/307 (42%), Gaps = 53/307 (17%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R F+ +AQ + A A+E++ +T + G + ALE ++ LF R + L AG+ L Sbjct: 7 LRTFLAVAQEGSFAGASERVALTQAAVGLQMRALEAELKTGLFERSGRGVLLTVAGRALI 66 Query: 69 ---QKLFPVYQRLSAI---DNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVT 122 +K+ Y+++ +NEI + + +G + ++ + ++++ ++ + Sbjct: 67 AHAEKIIACYEQMREGLEEENEIAGT------VTVGSTVSAMGLLSNTVVAMKPRFPRLN 120 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPL-RLGFLVSRRYEE 181 + V +G+ ++ LD + + E PP+ R G L + Y E Sbjct: 121 VRLVVQESSGLAQSVISGALDAAV----------------MIEGPPMERQGLLWTPLYVE 164 Query: 182 --------------RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYS 227 ++LL+E P+L RF R I+ +R G+ P S Sbjct: 165 PLTLVASSLVAGPDSDIKKLLRENPFL--RFDRRTPSGIRIEQTLRKLGLMPQDFLELSS 222 Query: 228 FMAKISAVERGHFLTVIPHFAWR---LVNPATLKYFDAPHRPMYMQEYL--YSIRNHRYT 282 + I V + +TV+PH WR VN TL+ P RP Q + + R H T Sbjct: 223 VSSIIDLVRQNVGVTVVPH--WRNADWVNDPTLRVLSLPGRPATRQIGMLEHGKREH-IT 279 Query: 283 ATMLQHI 289 + + QH+ Sbjct: 280 SVIRQHL 286 >UniRef50_A8KZ10 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=A8KZ10_FRASN Length = 299 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 1/106 (0%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + +K+R F+ +A + RAAE++H+ + I ALE+ +G +LFTR + + L Sbjct: 1 MDLDL-RKLRYFLAVADRLHFGRAAEELHIAQPVLSRQIRALEQDLGASLFTRDRHGVVL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTI 106 AG++L P+ A+ + + R SR + +G P I Sbjct: 60 TDAGRQLLADAGPLLASADAVRRRVTGAARGSRRLAVGFRTGIPVI 105 >UniRef50_Q6FDZ3 Putative transcriptional regulator n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FDZ3_ACIAD Length = 307 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 32/256 (12%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 K+ F+ + + +NI+RAA ++HM P + I +LE+ + TL R + + +AG+ L Sbjct: 6 KLNAFVAVVEESNISRAANRLHMQQPPLTRLIQSLEQDLNTTLLKRLPRGVEVTEAGKVL 65 Query: 68 YQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNT------YPTIIFDQLISLGDKYEG 120 YQ+ + S+I + N + + +I IG ++ PT+ L +K+ Sbjct: 66 YQEAVTILAHASSIPQRVQNIAQGKEGQINIGFTHSIGLHPFLPTL----LRHFREKFPA 121 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFII----SPQHVSARVQELENLT-ISELP---PLRLG 172 V+ E S + + D + + +LD + +P+H + + + N T I LP PL + Sbjct: 122 VSIHLEEDSSSALTDAVINEKLDIVFLRKPAPKHTAVQTMHVLNETLIVALPSNHPLAM- 180 Query: 173 FLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMID---ANMRPCGINPTIIYRPYSFM 229 +Q L +L + R + + D AN G +P I+ Sbjct: 181 ---------QQGAIHLPDLEPYEFVLYRRLAGQDLFDNILANCYQAGFSPNIVQEAPRLT 231 Query: 230 AKISAVERGHFLTVIP 245 + ++ + G L+++P Sbjct: 232 SSLNLIAAGIGLSIVP 247 >UniRef50_D2U2S5 LysR family transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U2S5_9ENTR Length = 308 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 6/187 (3%) Query: 2 DIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLN 61 ++F SK++ FI +AQ AA+++ ++ S K + +E Q+G LF L Sbjct: 17 NMFFSKRVEQFITIAQKGTFKEAADELCISPSALSKGMKEIEGQLGVQLFRHSGRGARLT 76 Query: 62 KAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGI---DNTYPTIIFDQLISLGDKY 118 G++LYQ+LFP YQ +SA ++ +E VI I D +P + +IS D Sbjct: 77 SNGEKLYQELFPHYQDVSATTKKLMLGFSSKKESVINIATDDAYFPDLA--SIISKIDSI 134 Query: 119 E-GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 E G+ ++S + + D + Q D I + +E+L +S L + Sbjct: 135 ESGILVDIKKYSNHLISDIICRIQADIFIGSREEENLPANIESLALSSKLELGAAEDIIN 194 Query: 178 RYEERQE 184 Y+++ E Sbjct: 195 SYKDKME 201 >UniRef50_C9PI61 Transcriptional regulator n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PI61_VIBFU Length = 316 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 30/270 (11%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K +R F +AQ ++AAE++++T SP I LE+ +G LF R N+ L AG++ Sbjct: 21 KMLRYFYQVAQCQQFSQAAEQLNITKSPLSAQIKELEQALGVVLFERDTRNVRLTTAGKQ 80 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIV-IGIDNTYPTIIF-DQLISLGDKYEGVTAQ 124 L Q+ ++ L N + S R + + +G+ ++ F D L L + +T Sbjct: 81 LNQECERIFDVLETSLNRVAQSAREEQATLNLGLMSSIFWAGFGDALHQLQQTHPTLTLN 140 Query: 125 PVEFSENGVIDNLFDRQLD---------FIISPQHVSARVQELENLTISELPPLRLGFLV 175 +E S L +D I+P H + QE + LP L Sbjct: 141 LLELSPEKQKQALLQHHIDIGLVRYADTMQIAPLHARSLYQE---KMVVALPTQH--ALA 195 Query: 176 SRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTI---IYRPYSFMAKI 232 +R+ QE L++ ++ +R +N A+ A+I + + G TI + P + +A I Sbjct: 196 ARKQLSLQE---LRDAEFVMLRQENSAS-TALIRQHCQQAGFEMTILQEVVEPNTLLAVI 251 Query: 233 SAVERGHFLTVIP----HFAWRLVNPATLK 258 S RG L+++P + AW V LK Sbjct: 252 ST--RG-LLSIVPASYANLAWPHVRFVALK 278 >UniRef50_Q2IPS6 Transcriptional regulator, LysR family n=4 Tax=Anaeromyxobacter RepID=Q2IPS6_ANADE Length = 301 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 12/170 (7%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++R F+++A + RAAE++HM+ P + IA LE + L R ++SL Sbjct: 1 MDL---RELRAFLVVASELSFRRAAERLHMSQPPLSRLIAGLERDLRVRLLDRSTRSVSL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSRE-IVIGIDNT-YPTIIFDQLISLGDKY 118 AG L+++ V +R A+++ + GRRS + + IG+ + T + + + L K Sbjct: 58 TPAGALLFREGPAVLERAEALESRVRERGRRSGQPLRIGLSTAGFATWVPEGIARLETKA 117 Query: 119 EGVTAQPVEFSENGVIDNLF-DRQLDFI--ISPQHVSARVQELENLTISE 165 G VE + N V D L D QL + + + LE ++E Sbjct: 118 GGPG---VELTSN-VPDRLLRDLQLGRLDAVCAETADGETPGLERWVVAE 163 >UniRef50_C2EGI9 LysR family transcriptional regulator n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EGI9_9LACO Length = 322 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 20/259 (7%) Query: 20 NIARAAEKIHMTASPFGKSIAALEEQIGYTLFTR-KDNNISLNKAGQELYQKLFPVYQRL 78 NI AA KIH++ KSI +E + +FTR K + L++ G+ LY + + ++ Sbjct: 42 NITAAAHKIHISQPALSKSINLIESEYHVHIFTRDKHRLVGLSQQGKILYAMMLDILEKY 101 Query: 79 SAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQL-ISLGDKYEGVTAQPVEFSENGVIDNL 137 ++NE+H G I G + P I+F L I + + + +E ++ + Sbjct: 102 EELENELHQLGTEPSLIKFGAIASTPQILFPGLFIDFESTHPNIHIEIIEDGGVNILHDF 161 Query: 138 FDRQLDF--IISPQHVSARVQELENLTISELPP-LRLGFLVSRRYEERQEQELLQELPWL 194 ++ DF +++P + + ++ + E+ L LG ++ + E L E P + Sbjct: 162 LQKKFDFALLVNPFELPPDLADVHLVAEDEIVAFLPLGHPLTSKAILTWED--LAEYPLV 219 Query: 195 QMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIPHFA------ 248 + + + F+ M +R G+ P Y S+ A++R +T++P Sbjct: 220 SLSDKYQTYFKVMEQFRIR--GLEPHFAYTSSSWQYLTDAIQRNFVITLMPSLVPTFSST 277 Query: 249 -----WRLVNPATLKYFDA 262 R+ NPA+ F A Sbjct: 278 DNIIIKRIKNPASFNLFLA 296 >UniRef50_C9PA71 Transcriptional regulators LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PA71_VIBFU Length = 298 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K++ F+ +AQ + + AE+ ++ + + I ALE ++G TL R + + L AG+ Sbjct: 4 KQLEYFLSVAQLKSFTKTAEQFFISQTAISQQIKALEHELGVTLLHRNNRIVELTAAGEV 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIF----DQLIS--LGDKYEG 120 Y I N IH S R +GI + D L++ LGD Y+ Sbjct: 64 FYSD-------AKNIINNIHASKERVANAAMGIQGSLNVGFLPMHGDTLLADILGDFYKK 116 Query: 121 VTAQPVEFSENGVI---DNLFDRQLDFIISPQHVSARVQELEN---LTISELPPLRLGFL 174 + +++ + LFD QLD I + + ELEN + LPP+ L + Sbjct: 117 NPLIEINIADDNITQLYKALFDGQLDVIFTIDY------ELENYPSIDYLNLPPIPLYAV 170 Query: 175 VSRRYEERQEQ----ELLQELPWLQMRFQNRANFEAMIDANMRPCGIN---PTIIYRPYS 227 V++ + + +LL E ++ + + N N +D ++ C P I ++ S Sbjct: 171 VNKTHRLSNLKSLPIDLLSEEAFIVISYSN--NLPYGVDRLIKICDSGQFVPKIKHKVPS 228 Query: 228 FMAKISAVERGHFLTVIPHF 247 F A + VE G + V+P++ Sbjct: 229 FEAALVMVEAGLGVAVLPNY 248 >UniRef50_B9IRL1 HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family n=23 Tax=Bacillus RepID=B9IRL1_BACCQ Length = 310 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 4/147 (2%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +K+R FI++A+ + RAA+++HM P + ++ LE+++ LF R N+ L Sbjct: 21 MDI---RKLRYFIVIAEEKQLTRAAQRLHMAQPPLSRQLSLLEQELSVNLFERNGRNMYL 77 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTIIFDQLISLGDKYE 119 + G LY K + +L EI ++G R ++ IG ++ + +++ D Y Sbjct: 78 TEEGNILYTKAKNIILQLEETITEIKDTGEGLRGKLSIGAFHSCIPFLSEKIRYFQDNYP 137 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFII 146 V + E + +I+ L +R ++ I Sbjct: 138 NVNLKIWEGGPSYLIEKLENRHIELAI 164 >UniRef50_B6VL02 Putative lysr-family transcriptional regulatory protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=B6VL02_PHOAA Length = 293 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 55/97 (56%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 +F SKK++ FI++A + AA+++ ++ S K + +EEQ+G LF N L Sbjct: 1 MFFSKKIKQFIMIANKGSFKEAADELCLSPSALSKGMKEIEEQLGVQLFQHSRRNAKLTV 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGI 99 G+ LY++LFP YQ +++ + S S++ VI I Sbjct: 61 NGELLYRELFPYYQDVNSTTKRLMKSFSNSKKNVINI 97 >UniRef50_D0LCK3 Regulatory protein LysR n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LCK3_GORB4 Length = 299 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 2/139 (1%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R F+ +A+ + RAA ++HM ASP + I LE ++G LF R + I L AG L Sbjct: 9 LRYFVAVAEERSFTRAATRLHMAASPLSQRIKDLERELGTPLFIRAHHRIDLTDAGTALL 68 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQPVE 127 + + R+ A+ ++ R +VIGI + + D ++ +L D + + Q + Sbjct: 69 PRAIDILDRVDAL-ADVVTEAHSVRRVVIGIAPEVSSTVRDSVLDALADSHPDIAPQLLP 127 Query: 128 FSENGVIDNLFDRQLDFII 146 S ++ +L +D + Sbjct: 128 ASTAPLLRDLRAGTVDVAL 146 >UniRef50_B6VNM5 Putative lysR-family transcriptional regulatory protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=B6VNM5_PHOAA Length = 98 Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 52/85 (61%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 +FISK++ +FI +A+ +I +A ++ +T SP +S+ LE +G LF RK ++L + Sbjct: 1 MFISKELSSFIAVAKNKSINKATTELFITQSPICRSLKKLEFSLGVKLFVRKSQGLALTE 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHN 87 G+ LY K+ + +RL I+ + N Sbjct: 61 EGECLYNKVLSICERLQEIEGDYKN 85 >UniRef50_C7N3H6 Transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N3H6_SLAHD Length = 316 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 3/80 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + +R+F++LA++ N +AAE +H + K +A LE ++G+ LF R ++SL Sbjct: 1 MDLSV---LRDFVVLAESQNFTKAAEAVHTSQPNLSKRMAVLERELGFKLFVRDTRSVSL 57 Query: 61 NKAGQELYQKLFPVYQRLSA 80 K+G+ LY + V R A Sbjct: 58 TKSGRALYPSVIDVLARFDA 77 >UniRef50_C3I9W8 HTH-type transcriptional regulator alsR n=1 Tax=Bacillus thuringiensis IBL 200 RepID=C3I9W8_BACTU Length = 292 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 4/142 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ LA+ N +RAAEK+H+ P K I LEE+IG LF R ++ L AGQ Sbjct: 4 RHIRYFLALAEELNFSRAAEKLHIAQPPLSKQIKDLEEEIGAKLFNRTKRHVELTNAGQV 63 Query: 67 LYQKLFPVYQRL--SAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQ 124 K + + ++ + I + ++G E+VIG + +I + ++Y V Sbjct: 64 FLDKSYQILDQVEQACISTRLTSTGTEG-ELVIGFSGSVQDLI-PTIQRYRERYPKVGIV 121 Query: 125 PVEFSENGVIDNLFDRQLDFII 146 + S + NL ++++D I Sbjct: 122 LQQLSTTIQVKNLIEKKIDIGI 143 >UniRef50_C3AN59 Transcriptional regulator, LysR n=4 Tax=Bacilli RepID=C3AN59_BACMY Length = 314 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 77/147 (52%), Gaps = 4/147 (2%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R FI++A+ + RAA ++HM P + ++ LE+++ +LF R N+ L Sbjct: 25 MDI---RQLRYFIVIAEERQLTRAAHRLHMAQPPLSRQLSLLEQELSVSLFERNGRNMHL 81 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTIIFDQLISLGDKYE 119 + G+ LY+K + Q+L EI ++G R + IG ++ + +++ + Y Sbjct: 82 TEEGKILYRKAKSIIQQLEETITEIKDTGEGLRGNLSIGAFHSCIPFLSEKIRYFQENYP 141 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFII 146 V + E +I+ L +R ++ + Sbjct: 142 NVNLKVWEGGPLYLIEQLENRNIELAV 168 >UniRef50_Q93EP7 TciR2 n=1 Tax=Photorhabdus luminescens RepID=Q93EP7_PHOLU Length = 194 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 8/109 (7%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M +F SK ++ F+ A+ + AA+ + +T SP + I LE+++G LF R L Sbjct: 11 MMLFCSKHLKYFMESAKKESFTLAADTLCITPSPLSRIIYQLEQRVGCQLFERLPGRTKL 70 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSRE------IVIGIDNTY 103 + G LYQ+L P Y+R+ +++ H RRS + +VIG Y Sbjct: 71 TEEGMALYQELLPCYERIQRVEDNWHY--RRSEQLATAGKLVIGTSGEY 117 >UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Tax=cellular organisms RepID=CYNR_ECOLI Length = 299 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 21/252 (8%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +S+ + F+ +A+ + RAA +H++ + I LEE +G LF R I L A Sbjct: 1 MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G+ Q Q L A IH+ +R + I + T+ + L++ +Y + Sbjct: 61 GEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFII--SPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 T Q E S+ + D L +LD I +P H S ++ + LT S L +V++ + Sbjct: 121 TLQLQEMSQEKIEDMLCRDELDVGIAFAPVH-SPELEAIPLLTES------LALVVAQHH 173 Query: 180 E-ERQEQELL-----QELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 EQ L ++L L F R ID G++P ++ S A + Sbjct: 174 PLAVHEQVALSRLHDEKLVLLSAEFATREQ----IDHYCEKAGLHPQVVIEANSISAVLE 229 Query: 234 AVERGHFLTVIP 245 + R T++P Sbjct: 230 LIRRTSLSTLLP 241 >UniRef50_C0X651 LysR family transcriptional regulator n=19 Tax=Enterococcus faecalis RepID=C0X651_ENTFA Length = 284 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 95/186 (51%), Gaps = 22/186 (11%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +K+ F +A+ N+I++AA ++H++ S S+ LE ++G+ LF R N+++LN G + Sbjct: 4 EKLEYFYTIAKYNSISKAASELHVSKSTLSASLKDLESELGHLLFNRNGNSLTLNSYGDK 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIF------DQLISLGDKYEG 120 + Q ++ + + +H + +G NT ++++ DQL + Y G Sbjct: 64 IVQSVYIILNEAKKMKLNLHEMIENPV-MRLGFGNT--SLMYKVTENEDQLNRFWECYHG 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + + +++ L + +LDF+I+ V++ V + E +L L++ VSR + Sbjct: 121 SSFE--------LLNKLENHELDFVITSADVNSPVLKKE-----QLIELKMYLCVSREIK 167 Query: 181 ERQEQE 186 + E+E Sbjct: 168 QEIEEE 173 >UniRef50_Q3A2J2 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=Q3A2J2_PELCD Length = 299 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 5/108 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI K++R F + + I+RAA+ +HM+ P + + LE ++G L R N + Sbjct: 1 MDI---KRLRYFCTIVEQGQISRAAQVLHMSQPPLSQRLQELENEVGAQLIIRNGGNWQV 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIV-IGI-DNTYPTI 106 K G+ LYQK V + A+ +E+ G+ + +V IG+ PTI Sbjct: 58 TKEGEFLYQKAQAVLSHMDALADEVRQVGKSVKGLVRIGVAPPNLPTI 105 >UniRef50_A9MK22 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MK22_SALAR Length = 275 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 49/82 (59%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M IFISKK+R FI + + + A A+E++ +T SP K+I +EE + LF RK N++ Sbjct: 1 MGIFISKKLRYFIAIMEKRSFASASEELCITRSPLSKAITEIEEYLDDKLFVRKHNDLIP 60 Query: 61 NKAGQELYQKLFPVYQRLSAID 82 E Y+K P+Y+ L ++ Sbjct: 61 TPLALEYYKKCKPLYEELLKLE 82 >UniRef50_P24417 Virulence genes transcriptional activator n=15 Tax=Salmonella enterica RepID=VRPR_SALDU Length = 297 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 65/113 (57%), Gaps = 1/113 (0%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD I+KK++ FI L +T + + A +++T +P + I+ LE ++ LF RK+ + Sbjct: 1 MDFLINKKLKIFITLMETGSFSIATSVLYITRTPLSRVISGLERELKQRLFIRKNGTLIP 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLIS 113 + Q +Y+K+ Y L A++ EI +G +++++ I D YP + + +IS Sbjct: 61 TEFAQTIYRKVKSHYIFLHALEQEIGPTG-KTKQLEIIFDEIYPESLKNLIIS 112 >UniRef50_UPI00019735EF LysR family transcriptional regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019735EF Length = 314 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 62/272 (22%), Positives = 120/272 (44%), Gaps = 27/272 (9%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 ++ FI+ A+ N +AA++++++ IA LEE G LF R + ++L AGQ L Sbjct: 6 LKYFIVAAEEMNFTKAAKRLYISQQSLSNHIAKLEEYFGVQLFDR-NTPLTLTVAGQRLL 64 Query: 69 QKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQPV 126 + + + E+ + RS E+ +GI N +++ LI+ ++ V + Sbjct: 65 KNAQLIMDVKKQTELELQDIRDFRSAELTVGIPNARGSVMLPPLITRFHREFPQVQLHLM 124 Query: 127 EFSENGVIDNLFDRQLDFIIS-----PQHV-SARVQELENLTISELPPLRLGFLVSRRYE 180 E + + + L+ ++D I P ++ + +QE + + L F R + Sbjct: 125 EKTSLEITEALYKGKVDLTIGFELDDPANIQTETLQEEHTMILVPACILEQFFTKEERLQ 184 Query: 181 -ERQEQ---ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 ER+E ++ + P+++M+ QN A+ + + R G +P I+ + M IS Sbjct: 185 IERRESLPIDVFKNCPFIKMKHQNWIG--AVFERSCRDSGFSPDIVLETANIMTMISLCI 242 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMY 268 G + ++P K F PMY Sbjct: 243 SGLGIIIVP------------KVFLGESSPMY 262 >UniRef50_C9KMN5 Transcriptional regulator, LysR family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMN5_9FIRM Length = 310 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 27/269 (10%) Query: 17 QTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKLFPVYQ 76 +T +I+RAAEK++++ + + ++E+++G LF R + G QK Q Sbjct: 14 ETGSISRAAEKLYISQPSLSQLLKSVEKKVGAPLFDRGSQPLRPTTIG----QKYLETAQ 69 Query: 77 RLSAIDNEIHNS-----GRRSREIVIG---IDNTYPTIIFDQLISLGDKYEGVTAQPVEF 128 R+ +D E H G +V+G +TY F L +KY G+ Q E Sbjct: 70 RIMELDTEFHRYVEDELGCAQGNLVVGSSPFRSTYFLASF--LPEFQEKYPGIRLQLAEH 127 Query: 129 SENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELP-PLRLGFLVSRRYEERQEQE- 186 + + + + D II+ Q V A L E+ L G +S++Y Q+ Sbjct: 128 TSKRLEEAVLSGDADLIIATQPVDANAFSFAELYSEEMVLVLPAGHELSKQYHLPQDCRG 187 Query: 187 --------LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 LL++ P++QM + + + + + + G P I + S ++ G Sbjct: 188 TLPLLPIGLLKDTPFIQMHSEQKLHQQLL--SLCEEAGFTPKIYLQTRSMETALTLAAAG 245 Query: 239 HFLTVIPHFAWRLVNPATLKYFDA-PHRP 266 T++P R P T + A P RP Sbjct: 246 LGATLLPMTLLRAFQPKTRPCYAALPTRP 274 >UniRef50_B4SNU6 Transcriptional regulator, LysR family n=1 Tax=Stenotrophomonas maltophilia R551-3 RepID=B4SNU6_STRM5 Length = 310 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 3/143 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F++ AQ + +AAE +H+ P G+ I ALEE+IG LF R+ I L+ AG+ Sbjct: 4 RHLRYFVMTAQLQSFTKAAEALHIAQPPLGQQIRALEEEIGTPLFHRQGRGIVLSDAGRV 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGI--DNTYPTIIFDQLISLGDKYEGVTA 123 + + R+ + ++ R + +G+ +Y + L + V Sbjct: 64 FWAAAVDILARVDHAKEQALSAARGEVGTLTLGLTESASYNDAVTALLRRFRQAHPAVQL 123 Query: 124 QPVEFSENGVIDNLFDRQLDFII 146 Q VE +I L D +LD +I Sbjct: 124 QLVEDGSESLIRRLDDGELDAVI 146 >UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RU53_9GAMM Length = 297 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 50/82 (60%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 ++ ++ FIL+A+T + ++AAEK+H+T K +A LEEQ+G LF R ISL +AG+ Sbjct: 3 TQNLKAFILVAETGSFSQAAEKLHLTQPAVSKRVALLEEQLGTELFDRIGRIISLTEAGK 62 Query: 66 ELYQKLFPVYQRLSAIDNEIHN 87 L + V + L A + + + Sbjct: 63 ALLPQAKSVERALDAAEQSVRD 84 >UniRef50_B9Z4I9 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4I9_9NEIS Length = 298 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 5/145 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I+ ++R F+ +AQ ++ +AAE +H++ I ALEE++G LF R + L Sbjct: 1 MEIY---QLRTFVTVAQQGHLTQAAELLHLSQPAVTAQIKALEEEVGMALFERTTGGVML 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEI-HNSGRRSREIVIGIDNTYPTIIFDQLIS-LGDKY 118 +AGQEL + + + I N H G+ S + +IG+ T + ++ L +KY Sbjct: 58 TRAGQELLPRAQSILESAKDILNHARHLKGQLSGKALIGVSLTPEILKLGAWVARLTEKY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLD 143 + + G+++ + ++LD Sbjct: 118 PLLDLRLQHGVTGGILNLVRKKELD 142 >UniRef50_Q7NTJ3 Probable transcriptional regulator, LysR family n=1 Tax=Chromobacterium violaceum RepID=Q7NTJ3_CHRVO Length = 297 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 25/205 (12%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I+ ++R F+ +AQ ++ +AAE +H++ I ALEE++G LF R +SL Sbjct: 1 MEIY---QLRTFVTVAQQGHLTQAAELLHLSQPAVTAQIKALEEEVGMPLFERNAGGVSL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG 120 +AGQE L P Q + A +I N ++ + + G T++ D ++ LG Sbjct: 58 TRAGQE----LLPQAQGVLAAARDIINHAKQLKGQLSGQARVGVTLMPD-ILKLGPWVAA 112 Query: 121 -VTAQP---VEFSENGVID--NLF-DRQLD---FIISPQHVSARVQELENLTIS-ELPPL 169 V+A P V+ + +D NL ++LD ++ +++ L+ L LPP Sbjct: 113 LVSAHPLLEVQLTHGVSVDVLNLVRKKELDAGFYLGKNPYMNVSTVPLQTLDFRVALPPA 172 Query: 170 RLGFLVSRRYEERQEQELLQELPWL 194 G + S + ++ L +LPW+ Sbjct: 173 WAGQMASGKLKD------LGKLPWV 191 >UniRef50_UPI0001973C57 transcriptional regulator, LysR family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973C57 Length = 303 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 52/89 (58%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R F++ A+ ++ +AAE + + +SI LE+++G +LF R+ NI LN AG+ L Sbjct: 5 QLRYFLVAAKYQHMTKAAEVLQIAQPALSQSIKRLEQELGVSLFEREKRNIRLNDAGRFL 64 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRSREIV 96 QKL P+ L I +EI R ++ + Sbjct: 65 EQKLLPIMAALDEIPSEIQKKERMNQRTI 93 >UniRef50_A6CQJ0 Transcriptional regulator n=1 Tax=Bacillus sp. SG-1 RepID=A6CQJ0_9BACI Length = 297 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 15 LAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK-------AGQEL 67 +++ +I RAAE++H++ S +SI+ LE+++G T+FTR +L +G E+ Sbjct: 12 VSKEGSITRAAERLHLSPSALSQSISQLEKELGVTIFTRSRKGTTLTSEGKKIVNSGNEI 71 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVE 127 + +Y+ LS ID E + + IG + I++D I ++ V + +E Sbjct: 72 LSSIEKMYRDLS-IDKE-------EKLLKIGCAPSIIYIVYDAFILFHKEHSNVKVEIIE 123 Query: 128 FSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRL 171 ++ ++ L ++D SP S R ELE +I E +L Sbjct: 124 LDQDEILTKLVHGEIDLAFSP--FSER--ELEGSSIREFIDYKL 163 >UniRef50_A1W2J2 Transcriptional regulator, LysR family n=25 Tax=cellular organisms RepID=A1W2J2_ACISJ Length = 306 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 3/71 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ K MR F+ +A+ N RAAE++HM P + I ALE+++G LF R + L Sbjct: 1 MDL---KDMRQFLAVAEERNFTRAAERLHMAQPPLSRQIKALEDEMGAPLFLRTPAGVEL 57 Query: 61 NKAGQELYQKL 71 +AGQ L ++ Sbjct: 58 TEAGQALLDEV 68 >UniRef50_B7S107 Putative lysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S107_9GAMM Length = 301 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 116/262 (44%), Gaps = 37/262 (14%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 ++ + F+ +A+T N +R AE +HM+ S +++A LE+++G LF R ++ LN AG+ Sbjct: 3 TRALSVFLSVAETLNFSRTAENLHMSVSAVSRAVARLEQEVGQPLFDRDRRSVVLNHAGR 62 Query: 66 E---LYQKLFPVYQRLS-AIDNEIHNSGRRSREIVIGIDNTYPTIIF----------DQL 111 E ++ +Q+L +D+E +G S + +T+ I D + Sbjct: 63 EFRDFARRSLADWQQLQRKLDSEGELAGEISLYCSVTASHTFLAPILAAFRASHPAVDIM 122 Query: 112 ISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRL 171 + GD+ +GV V+D D L I P R L+ L + + P L Sbjct: 123 MHTGDQADGV---------GRVLDGHDD--LAVTIRPLQSPTR---LDFLPLVDSP---L 165 Query: 172 GFLVSRRYEERQEQELLQ----ELPW--LQMRFQNRANFEAMIDANMRPCGINPTIIYRP 225 F + Y + +E+ L + E+ W L + R + ++D +R GI P I + Sbjct: 166 QFCMPASYCQVRERVLDEQERGEIQWDSLPLIVPERGTTKELLDDWLRDRGIRPRIYAQV 225 Query: 226 YSFMAKISAVERGHFLTVIPHF 247 A ++ V G + + P Sbjct: 226 AGHEAIVAMVSLGLGVGIAPQL 247 >UniRef50_Q8GF96 TciR1 n=3 Tax=Photorhabdus luminescens RepID=Q8GF96_PHOLU Length = 310 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 6/106 (5%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 IF SK+++ F+ A+ + AA+ + +T SP + + LE+++G LF R L + Sbjct: 9 IFCSKQLKYFMESAKKESFTLAADTLCITPSPLSRLVYQLEQRVGCQLFERLPGKTKLTE 68 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRSR-----EIVIGIDNTY 103 G+ LYQ+L P Y+R+ +++ N R + ++VIG Y Sbjct: 69 EGKALYQELLPCYERIQKVEDN-WNCRRNYKLSNRDKLVIGTSGEY 113 >UniRef50_Q3IFU9 Putative bacterial regulatory protein LysR Family n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3IFU9_PSEHT Length = 300 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 67/118 (56%), Gaps = 2/118 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + ++ F+++AQT +IA+AA ++ + S +++ LE+Q+G LF R N++ L AG++ Sbjct: 4 ESLQYFVMIAQTGSIAKAAARLSVNRSTMSMALSTLEDQLGTALFIRTGNSMQLAPAGEK 63 Query: 67 LYQKLFPVYQRLSAIDNE-IHNSGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGVT 122 + + +I + +H+ + +VIG D+ P + ++I S+ +Y G++ Sbjct: 64 IIDDSIRLINLAESIKHRCLHDDEQLPHRLVIGRDDALPEAFWREIIRSIRKRYPGIS 121 >UniRef50_A6FD49 Transcriptional regulator n=1 Tax=Moritella sp. PE36 RepID=A6FD49_9GAMM Length = 300 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 1/139 (0%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K++R F+ ++Q +I AA+ + +T + +++ LE Q+G LF R +N + LN GQ Sbjct: 6 KQLRVFVAVSQQQSITHAAKTLCLTKAAVSMALSELENQLGQQLFDRTNNRLHLNPYGQR 65 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPV 126 L + QR ++ID SG+ E+ IG T + L++ + T Q + Sbjct: 66 LLPIADELLQRAASIDTLFQQSGQLIGELAIGASETIGNQLCPWLLAQFIQLTAHTQQTL 125 Query: 127 EFSENG-VIDNLFDRQLDF 144 S + + + + QLD Sbjct: 126 HISNSANIAEMILSYQLDI 144 >UniRef50_C0D3N8 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3N8_9CLOT Length = 297 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 40/270 (14%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 SK+++ + +A+ NI RAAE++H++ I+ EE++G +F R ++L +AG+ Sbjct: 3 SKQIQYILKVAECQNITRAAEQLHVSQPALSHFISKAEEELGAKIFNRGTTPLTLTQAGE 62 Query: 66 ELYQK---LFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFD-QLISLGDKYEGV 121 + + + + L ++++NS R EI +G+ + T + L Y V Sbjct: 63 HYVKTARMMMALEENLKQEIDDLNNS--RDGEIRLGLSDMRATSLLPFALPEFRRLYPNV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISP-----QHVSARV---QELENLTISELPPLRLGF 173 T + VE V DN+ + +D I P + + ARV +EL ++ +LP Sbjct: 121 TIKTVESGSRTVEDNVRNGVVDLGIIPLYDYGEDLCARVLYDEELLLVSSEDLP------ 174 Query: 174 LVSRRYEERQEQELLQELPWLQMRFQNRANFEAM---------IDANMRPCGINPTIIYR 224 R R PW+ + +F + +DA G+ P + Sbjct: 175 --CERGNVR---------PWVDIEEVTGRDFALLTGDNRLRRAVDAVFLEHGVKPRTVME 223 Query: 225 PYSFMAKISAVERGHFLTVIPHFAWRLVNP 254 + M G L ++P R++NP Sbjct: 224 SRNNMTVYMLATSGMALAIVPETVVRMMNP 253 >UniRef50_UPI0001C36E54 transcription regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36E54 Length = 293 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 83/161 (51%), Gaps = 3/161 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++++F + Q N+ AAE H++ S +SI +LE++IG L RK+ + L +AG+ Sbjct: 4 RQIQHFQTVIQENSFTEAAELCHISQSGISRSIQSLEDEIGAKLIIRKNRSFELTEAGEH 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQ 124 Y+K + L + +E R+ + E+ +G+ +TY F++ + + +KY V + Sbjct: 64 FYKKSLIITADLEQLCHETVRIARKDAAELRLGVLSTYSGDQFNRAVAAFSEKYPTVDIK 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISE 165 + + + + L + ++D Q A ENL ++E Sbjct: 124 VISGNHEDLYEGLVNDRIDISFHDQR-RAFHDAYENLVLTE 163 >UniRef50_B8IDW8 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IDW8_METNO Length = 305 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 6/104 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++R F +LA+ + RAA ++ ++ P +I LEE++G TLFTR ++L Sbjct: 1 MDL---RQLRYFAVLAEERHFGRAARRLSLSQPPLSHAIRQLEEELGATLFTRTSRQVAL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN--SGRRSREIVIGIDNT 102 AG L ++ + QR + +H+ GRR R + IG + Sbjct: 58 TPAGTALQREAKAILQRAADARVLVHDIACGRRGR-LRIGFSGS 100 >UniRef50_B0A6J5 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6J5_9CLOT Length = 292 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 15/146 (10%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI K++ NFI + + NI +AA+K+H++ P + ALE ++G L R ++L Sbjct: 1 MDI---KQLINFITIVEEGNITKAAQKLHISQPPLSNQLKALEAELGVKLIERGSRKVTL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN--SGRRSREIVIGIDNTYPTIIFDQLISLGDK- 117 G LY++ + + NE+ + SG + IG +T I ++LIS K Sbjct: 58 TDVGNLLYKRGKDMVNVFESTLNEVEDFKSGIEGV-LKIGAVSTCNQFIPNELISPYAKQ 116 Query: 118 --------YEGVTAQPVEFSENGVID 135 YEG T + V+ E G++D Sbjct: 117 YPKVKFELYEGNTYEVVDMIERGIVD 142 >UniRef50_Q7WMW6 Putative LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WMW6_BORBR Length = 303 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 12/117 (10%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ ++++ F++L++T N RAAE++HM P +I LE+++G LF RK ++SL Sbjct: 1 MDL---RQLQQFVVLSETLNFHRAAERLHMAQPPLSTAIRKLEDELGIVLFDRKPRSLSL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDN-----EIHNSGRRSREIVIGIDNTYPTIIFDQLI 112 AG + + + LS +D + SG + R IV+G NT + +++ Sbjct: 58 TVAGAAMLKH---ARRTLSNVDELQRCAREYVSGDQGR-IVVGFSNTASNAVLPRIL 110 >UniRef50_C8QBP2 Transcriptional regulator, LysR family n=1 Tax=Pantoea sp. At-9b RepID=C8QBP2_9ENTR Length = 291 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 1/98 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K++ F +A+ +I++AA+ +++ P GK + LEE+IG LFTR + L +AG Sbjct: 4 KRLHYFCTIAEQGSISKAAKLLNIAQPPLGKRLQELEEEIGSPLFTRTPRRMVLTEAGTF 63 Query: 67 LYQKLFPVYQRLSAIDNE-IHNSGRRSREIVIGIDNTY 103 LY++ + R++ + + I + R+ R + IGI Y Sbjct: 64 LYRQACDILSRVNQLKRQTITIATRKQRRVNIGISYLY 101 >UniRef50_A0QT15 Transcriptional regulator, LysR family protein n=2 Tax=Actinomycetales RepID=A0QT15_MYCS2 Length = 311 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 19/246 (7%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTR-KDNNISLNKAGQE 66 ++R F+ A ++ +AA+++H+ S +I+ LE+QIG LF R + ++L AG+E Sbjct: 11 QLRYFVKAATYLSMTKAADELHIAQSAVSAAISQLEQQIGTQLFIRHRARGLALTAAGEE 70 Query: 67 LYQKLFPVYQRLSAI-DNEIHNSGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQ 124 + + L + DN R + + T + +L+ LG ++ + + Sbjct: 71 MLHDTRALLAHLDEVLDNATGRVDRVHGTVRLACFVTLTPFVLPRLLPDLGTRHPDLEVE 130 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTIS----ELPP-LRLGFLVSRRY 179 +E S + V L + + ++ + E L ++ LPP RL S R Sbjct: 131 VIETSADAVRTVLRNGTAELALTYDLALGAGVDAEYLGVAAPYVALPPDHRLADRKSIRL 190 Query: 180 EERQEQEL-LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 E E+ + L +LP +R FE+M + G+ P I YR S+ A V RG Sbjct: 191 TELAEEPMVLLDLP------DSRDYFESM----LAKAGVTPRIRYRSASYEAVRGLVARG 240 Query: 239 HFLTVI 244 H +++ Sbjct: 241 HGFSIL 246 >UniRef50_Q984W9 Transcriptional regulator n=2 Tax=Mesorhizobium RepID=Q984W9_RHILO Length = 296 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 40/63 (63%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 +F +++R FI +A+T N+ RAAE +H++ SP + I LEEQ+G LF R + LN Sbjct: 1 MFDLRQLRYFITVAETGNVGRAAEILHISQSPLSRQIMQLEEQLGVALFERARQRVHLNA 60 Query: 63 AGQ 65 G+ Sbjct: 61 EGR 63 >UniRef50_D1W106 LysR substrate binding domain protein n=1 Tax=Prevotella timonensis CRIS 5C-B1 RepID=D1W106_9BACT Length = 303 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 74/142 (52%), Gaps = 1/142 (0%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 ++++ F+ +A+T N + A+ ++ +T S + I+ LE++IG LF R + + L + G+E Sbjct: 4 RQLKYFLKVAETLNFSEASRRLFITQSTLSQQISHLEKEIGLPLFERNSHEVYLTEPGKE 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQP 125 L + I + + + E+ IG+ ++ TI+ D ++ Y GV Sbjct: 64 LLPYAIKAVVATDSCIAHIEDLKQMIAGELNIGVTYSFSTIMMDTMVDFMKTYPGVKLNI 123 Query: 126 VEFSENGVIDNLFDRQLDFIIS 147 S + +++ L R++DF+++ Sbjct: 124 FYHSMDELLEMLKSRKVDFVLA 145 >UniRef50_C4DFU1 Transcriptional regulator, COG0583 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DFU1_9ACTO Length = 309 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/256 (21%), Positives = 109/256 (42%), Gaps = 15/256 (5%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 +F ++R F+ +A+ ++ AA K+H +A LEE+IG L +R I L + Sbjct: 1 MFDENRLRVFVAVAREGSVTAAAAKLHYAQPSVSHHLARLEEEIGAPLVSRLGRGIRLTE 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPT----IIFDQLISLGDK 117 AG+ ++ + R+ A E+ + +G + + + +PT ++ + D Sbjct: 61 AGRLFAERAEEILGRIDAARTELASHAGLVNGHVRLA---AFPTALAALVPSAAGAFADA 117 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISEL---PPLRLGFL 174 Y GV E I L ++D ++ + + + E L+++ L P + Sbjct: 118 YPGVDVDLTEAEPPQAIAALRRGEVDICLAFHYGATPPADWEALSVAPLFDEPVYLVTSP 177 Query: 175 VSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 S R E + W+ Q RA+ + +A+ G P++ + ++A + Sbjct: 178 GSSPSGPRDELASYADRRWIAGCAQCRAHLLSACEAS----GFTPSVAFETDDYVAVQAL 233 Query: 235 VERGHFLTVIPHFAWR 250 V +G ++ +P A R Sbjct: 234 VAQGMGVSTLPGLALR 249 >UniRef50_O50643 SalR n=1 Tax=Pseudomonas putida RepID=O50643_PSEPU Length = 309 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 6/107 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 ++++ FI +AQT N RAAE +H+ K I LEE++G+ LF R+ + L +AG+ Sbjct: 4 RQLKRFIAVAQTQNFTRAAELLHVAQPSLSKQILLLEEELGFALFKRETRPVQLTEAGRR 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSRE-IVIG-----IDNTYPTII 107 Y+ V R+ + RE + IG + PT+I Sbjct: 64 FYEDSLAVIGRVEQMAQNARRVALGDREKLTIGFVASALYAALPTVI 110 >UniRef50_C3BCJ4 Transcriptional regulator LysR n=1 Tax=Bacillus mycoides Rock3-17 RepID=C3BCJ4_BACMY Length = 298 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/264 (21%), Positives = 107/264 (40%), Gaps = 12/264 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 KK+ F+ + + I RAA ++H+ P + ALEE++G L R L +G Sbjct: 4 KKLIYFVTIVEEGQITRAANRLHIAQPPLSMQLKALEEELGVILINRDKKEFELTHSGFT 63 Query: 67 LYQKLFPVYQRLSAIDNEI--HNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQ 124 Y++ V + + E+ G R + + IG + + L +KY VT Q Sbjct: 64 FYRRAKEVLDSIDGMITEVKEEQEGLRGK-LSIGTVKSCVPYLLPLLNKFKEKYPDVTFQ 122 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVS---RRYEE 181 E + + L ++++ I + + Q+++N+ + PL LV+ + +++ Sbjct: 123 LWEEDSQRLEELLLSKKIELGIV--RLPLQSQDVKNINSLSIYPLHSEPLVAIQPKDWDK 180 Query: 182 RQEQ----ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + E L+ P L + Q + G P II + E Sbjct: 181 FESNVVTIEELKNFPLLILHSQGDIYIFHKFVETCKTHGFTPKIICESSDVSTLMKLAEL 240 Query: 238 GHFLTVIPHFAWRLVNPATLKYFD 261 G + ++P A L+ +L YF+ Sbjct: 241 GVGIAIVPKVAVHLLQQESLSYFE 264 >UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46Q42_RALEJ Length = 297 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 56/249 (22%), Positives = 111/249 (44%), Gaps = 15/249 (6%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAG-- 64 K +R F+ LA N RAA H++ S F + LEEQ G LF R ++ L+ G Sbjct: 6 KHLRAFVALATHRNFTRAARACHLSQSAFSALVQTLEEQAGSRLFERTTRHVELSADGMR 65 Query: 65 -QELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTA 123 +E ++L ++ + D H R+ R + + + + L + +Y G+ Sbjct: 66 FEETARRLLGDFE-AAFEDLRAHAERRKGRVSIAALPSIAGGDLPPLLAAFRQRYPGIAL 124 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHV---SARVQELENLTISELPPLRLGFLVSRRYE 180 + + +G ID + + DF ++P V RV+ L + T + P +++R+ Sbjct: 125 ELFDQLADGCIDLVRRGRADFALAPAPVQDDDLRVEPLVHDTFHLVCP--TTHVLARK-- 180 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 R ++L P++ + ++ +DA + P ++ + + +A + V+ G Sbjct: 181 RRITPQMLAGQPFIHL--SRTSSVRQHLDAALHPLKLSSVMEVEHLATVAAL--VQAGLG 236 Query: 241 LTVIPHFAW 249 ++V+P A Sbjct: 237 VSVVPSLAL 245 >UniRef50_C6WEH4 Transcriptional regulator, LysR family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WEH4_ACTMD Length = 291 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 4/115 (3%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 S+ +R F+ +AQ N ARAAE++ ++A P ++I LE +G LF R + ++L AG+ Sbjct: 5 SRPLRYFVAVAQELNFARAAERLAISAPPLSRAIRKLEADLGVVLFERDTHRVALTPAGR 64 Query: 66 ELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGI----DNTYPTIIFDQLISLGD 116 L ++ + L A +G ++V+ + D T I D+ + D Sbjct: 65 VLLEQARRALEALDAAVARTRRAGEDEPKLVLAVKADSDAGLLTAILDRFAAQQD 119 >UniRef50_A9C079 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=A9C079_DELAS Length = 316 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 76/145 (52%), Gaps = 10/145 (6%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R+ I +AQT + +R+AE +H+T +S+ ALE+++G LF R + L G+E+ Sbjct: 5 QLRHLISVAQTGSFSRSAEAMHLTQPALSRSVRALEQELGIPLFDRIGRHSELTAFGREM 64 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRSRE-----IVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 + + L A +E+ + GR+ RE + +G+ + I+ + + + GV Sbjct: 65 LGR----ARALVAEADELRDRGRQLREGAAGTVRVGLGSGPGAILMTPFLQHMTVHHPGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFII 146 + S + ++ +L +R LD ++ Sbjct: 121 RTEVARGSTDLLVHSLRERLLDALV 145 >UniRef50_B5EJJ4 Transcriptional regulator, LysR family n=3 Tax=Acidithiobacillus RepID=B5EJJ4_ACIF5 Length = 300 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 9/147 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + +R+F++LA+ N RAA ++H+ +SI ALEE+IG LF R +SL Sbjct: 1 MDL---RHLRHFVVLAEALNFHRAATRLHLAQPSLSRSIRALEEEIGLPLFLRNQREVSL 57 Query: 61 NKAGQELY---QKLFPVYQRLSAIDNEIHNSGRRSREIVIG-IDNTYPTIIFDQLISLGD 116 AG+ L ++L +R A+ ++ N ++ + IG + +T ++ L Sbjct: 58 TAAGRVLLPEARQLLAQARRTEALLGDLQNG--QAGTLRIGFLASTAIALLPGLLRGFRQ 115 Query: 117 KYEGVTAQPVEFSENGVIDNLFDRQLD 143 + V + E S + + L D Q+D Sbjct: 116 HFSQVHLELREMSSDAQLQALRDDQID 142 >UniRef50_A6UB72 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UB72_SINMW Length = 326 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/255 (23%), Positives = 113/255 (44%), Gaps = 17/255 (6%) Query: 1 MDIFISKKM-RNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNIS 59 MD+F + R+F+++A+ N+ AAEK+ ++ +SI LE++ G+ LF R ++ Sbjct: 15 MDLFRHVGLLRSFLMVAREGNVTAAAEKLGISQPALTRSIRRLEDETGFRLFDRHTRGVT 74 Query: 60 LNKAGQEL--YQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDK 117 G+ L + +L R ++ + E SG R +I IG + + + ++ Sbjct: 75 PTIYGKALLRHAQLIDTECRFASSELEALRSGHRG-QIKIGGGPFWGAALLPRAVARLHS 133 Query: 118 YEGVTAQPVEFSENGVID-NLFDRQLDFIIS--PQHVSARVQELENLTISELPPLRLGFL 174 ++ N V+ L D +LD ++S P+ +S Q E+ + + +R Sbjct: 134 LLPKLQVNLQIGVNNVLHPKLLDGELDLVVSAAPRDLS---QFPEHFRFTRITTIRSQMF 190 Query: 175 VSRRY----EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPT-IIYRPYSFM 229 V + +ER E L PW+ +Q + ++ G+NP I + S M Sbjct: 191 VREGHPILAQERIRYEDLANYPWIM--YQQDPEIIERVATLLKDLGVNPPRIAIKASSLM 248 Query: 230 AKISAVERGHFLTVI 244 A + + G FL + Sbjct: 249 AVLELLRSGDFLACL 263 >UniRef50_C6DBU7 Transcriptional regulator, LysR family n=4 Tax=Pectobacterium RepID=C6DBU7_PECCP Length = 299 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 37/58 (63%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAG 64 K++R FI L +T+N RAA+KI+++ F IA LEE++GY LF R + LN G Sbjct: 6 KQLRAFIALTETDNFTRAAQKINLSQPAFSSLIAGLEEEVGYRLFDRDTRKVQLNADG 63 >UniRef50_D2SB86 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=D2SB86_9ACTO Length = 312 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 39/62 (62%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 ++++ F+ +AQT + RAAE++HM SP ++I LE Q+G TLF R + L AG+ Sbjct: 4 RQLQYFVAVAQTRHFGRAAERLHMAQSPLSQAIRQLEAQLGATLFDRTTRRVELTPAGEA 63 Query: 67 LY 68 L Sbjct: 64 LL 65 >UniRef50_C9KLE6 Putative LysR substrate binding domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLE6_9FIRM Length = 298 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/110 (23%), Positives = 58/110 (52%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 +MR F+ + + NI AA ++H+ S +++ +EE+ G LF R I +++ GQ+L Sbjct: 5 QMRYFLTVCRLQNITHAAAELHLAQSTLSQAMQTIEEETGLNLFLRSGRTIRISQDGQKL 64 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDK 117 QK+ + + + + + G R ++ + + +++ +L+S+ K Sbjct: 65 AQKVTVLLREIDVFEENVREMGNRHGKVSLAVPQQQASLLIPRLLSIFQK 114 >UniRef50_C8NSG7 LysR family bacterial regulatory protein n=4 Tax=Corynebacterium RepID=C8NSG7_COREF Length = 329 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 51/229 (22%), Positives = 103/229 (44%), Gaps = 17/229 (7%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R+F+ + + I RAAE++H++ + +AALE ++G L R + + KAG+ Sbjct: 4 EQLRSFVEVVRHGQIFRAAEELHISQPALSRQMAALEAEVGAPLLERHSRGVHMTKAGEA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPV 126 L+ + + R+ ++ +EI + I IG+ P+ + +S + E + Sbjct: 64 LHDEAVELLNRMQSVIDEIRSGEHLIVSINIGVPPGLPSAWLRERLS--TRGENFRVSLI 121 Query: 127 EFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER---- 182 E + + L ++LD + AR Q E + RLG ++ E R Sbjct: 122 EAPTDEQLIMLKQKKLDIAL------ARRQS-EAFPTHLVYQQRLGIVIREGSELRHTLR 174 Query: 183 -QEQELLQELPWLQMRFQNRANF---EAMIDANMRPCGINPTIIYRPYS 227 +E L+++ L++ +R E ++ M G+ T I+R + Sbjct: 175 HRESATLEDMEGLRVLAHSRGEVRVQEEILKNAMLSAGVAATWIFRKFG 223 >UniRef50_C4DCW0 Transcriptional regulator, COG0583 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DCW0_9ACTO Length = 327 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 33/227 (14%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 + ++R F+ +A T +I RAAE++ +T K +A LE ++G L R + L AGQ Sbjct: 5 TAQLRAFVTIASTGHIGRAAERLRLTQQGVSKRLAQLERRLGLRLADRHSGGVRLTAAGQ 64 Query: 66 ELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTY----PTIIF-----DQLISLGD 116 L + E+H R + + +D Y P + D ++ Sbjct: 65 RLLPHARTIVAAWDVAVEELHG----DRRLTLVVDGLYEPLAPQLWLRGAAADPRFTVRS 120 Query: 117 KYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVS 176 + A VE G +D F R + P+ +S V LE L + P G ++ Sbjct: 121 APRDIPASQVEAVLGGYVDVAFGRA-NTTPWPRELSRAVALLEPLALLTGP----GHHLA 175 Query: 177 RRYEERQEQELLQELPWLQMRF----------QNRANFEAMIDANMR 213 RR R QEL L++ F Q A FE+ D +R Sbjct: 176 RRPRVRT-----QELSDLELWFPGGGSPAQWRQLAAEFESTFDVGIR 217 >UniRef50_B6WRH5 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WRH5_9DELT Length = 311 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 5/108 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ +F+ A + RAAE ++ + S K+I+ LEE++G TLFTR + +SL +AG+E Sbjct: 4 RQLEHFVTTADFGSTRRAAETLYTSQSSVSKNISMLEEELGVTLFTRSNRGVSLTEAGRE 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISL 114 Y + + Q + + GR+ + I I + YP+ + +L Sbjct: 64 FYDQARTILQNVRL----MKQMGRQKKYKKINI-SCYPSTMISRLFCF 106 >UniRef50_Q3IZR2 Transcriptional regulator, LysR family n=4 Tax=Rhodobacter sphaeroides RepID=Q3IZR2_RHOS4 Length = 393 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 74/140 (52%), Gaps = 3/140 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +K++ F +AQ+ ++ AA+ + +T + I LE+ +GY LF R+ N + L +AG Sbjct: 85 RKLKAFWAVAQSQSLTGAAKLLGITQPSLSQQIIGLEQSLGYPLFVRRSNRMILTEAGVL 144 Query: 67 LYQKLFPVYQRLSAIDNEI--HNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQ 124 + +K PV + + +++ + + SG+R + G+++ TI+ + L + D Sbjct: 145 MLRKAEPVLRGMQDLEDTLAAYGSGQRHPLRLAGVESLLRTILPEALRHM-DLDGTAECD 203 Query: 125 PVEFSENGVIDNLFDRQLDF 144 +E + V++ L+ RQ D Sbjct: 204 LLEGAPADVLEMLYSRQADI 223 >UniRef50_Q02SX9 Possible LysR family transcription regulator n=6 Tax=Gammaproteobacteria RepID=Q02SX9_PSEAB Length = 309 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 7/98 (7%) Query: 3 IFISKKMRN---FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNIS 59 +F S++++ F+ +A+ + + AAE++H+TAS K+IA LE+++G LF R ++ Sbjct: 1 MFSSERLKGIDVFVCVAEAGSFSAAAERLHLTASAVSKAIARLEDRLGLRLFERTTRRLA 60 Query: 60 LNKAGQELYQKLFPVYQRLS----AIDNEIHNSGRRSR 93 L AG Y+ V L A+ E H +G R R Sbjct: 61 LTDAGTTFYRTCSRVLGDLEESELALHAEHHQTGGRIR 98 >UniRef50_D0ZD32 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=D0ZD32_EDWTE Length = 292 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 1/137 (0%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K++R F+ +A++ + +AA ++ MT ++++ LE Q+G LF R+ + LN GQ Sbjct: 6 KQLRVFVAIARSGTLTQAASQLFMTKGALSQTLSELENQLGVRLFERQHARLLLNHEGQR 65 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPV 126 L + R+ +++ + N+G +++G T + + +L+S G P+ Sbjct: 66 LLPVADELLTRMQGVES-LFNNGNGDTRLMVGCTKTIGSYLLPELLSAFQLRYGWLPLPI 124 Query: 127 EFSENGVIDNLFDRQLD 143 + G+ + +LD Sbjct: 125 IANTQGIAGMVAGFELD 141 >UniRef50_A6B948 Transcriptional regulator n=6 Tax=Vibrio RepID=A6B948_VIBPA Length = 301 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 26/253 (10%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K +R F +AQT + +AAE +++T SP I LEE + LF R N+ L +AG+ Sbjct: 12 KMLRYFYEVAQTKHFTKAAENLNITNSPLSNRIKELEEVLNVKLFERDSRNVMLTEAGRL 71 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIV-IGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 L K ++Q L N++ G R I+ +G+ ++ FD+L+ +++ A Sbjct: 72 LESKCQLIFQTLDVSLNQVQQVGLNQRNILRVGVVSSAFWGGFDRLLQRFHAEHDTYHAD 131 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLG-----FLVSRRY 179 + + +L ++++D I V+ + L I + LG VS ++ Sbjct: 132 IFDLNPETQKKHLSEKKIDVGI--------VRFADALNIYPYQSVSLGKDVFVVAVSEQH 183 Query: 180 EERQEQEL-LQELPWLQMRFQNRANFEA---MIDANMRPCGINPTI---IYRPYSFMAKI 232 E + L LQ+L + F + AN + +I+A ++ G +P I + P + MA + Sbjct: 184 ELASKSLLRLQDLKTCEFAFMSLANSASANFIINACLQE-GFSPHIGKQVVEPSTLMAYV 242 Query: 233 SAVERGHFLTVIP 245 + + +T++P Sbjct: 243 A---NSNTVTLVP 252 >UniRef50_C0AR12 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AR12_9ENTR Length = 83 Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 43/75 (57%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 +F S+K+ F +A ++ +AAE+ +T S I LE Q+G +L R N + L Sbjct: 1 MFFSRKINQFFAVATCQSLVKAAEQTRVTPSALRHGINELESQLGKSLIKRSKNGMDLTP 60 Query: 63 AGQELYQKLFPVYQR 77 AG+ LY +L+P Y++ Sbjct: 61 AGKSLYNRLYPYYEK 75 >UniRef50_A9WDF5 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9WDF5_CHLAA Length = 298 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 53/245 (21%), Positives = 107/245 (43%), Gaps = 7/245 (2%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 K+ F + ++++AAE++HMT S + I ALE+ +G LF R + L AGQ L Sbjct: 6 KLDIFTRVVAAGSLSKAAEQLHMTQSGVSQHIRALEDSLGTELFVRGRRGVELTPAGQRL 65 Query: 68 YQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISL-GDKYEGVTAQP 125 +++ ++ + + + +G R ++ IG+ + + + + +Y + Sbjct: 66 LAYCEGIFRLVAEAELAVTDVAGLRDGQLTIGVTPGVSAYLLPEWVQMFRQRYPNLAVSA 125 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 + +++ L + LD + + ++L+ + E +V RR+ Sbjct: 126 QTGTTPSIVNELRNGSLDLGAIEGELDSAERDLQQQALREFDQY---VVVGRRHPWWGRS 182 Query: 186 EL-LQELPWLQMRF-QNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTV 243 E+ LQEL M Q+ + +D +R + P II + + V G LT+ Sbjct: 183 EVHLQELAGQPMVMRQSSSQTRVWLDHALREQSLTPRIIAELDNLESIKRMVMIGTGLTI 242 Query: 244 IPHFA 248 +P +A Sbjct: 243 LPLYA 247 >UniRef50_C1SL97 Transcriptional regulator, COG0583 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SL97_9BACT Length = 281 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 9/145 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ I + ++ FI++ + N RAAE+++ T S + L E++G LF RK ++L Sbjct: 1 MDLSI-ELLKTFIVVVEEMNFTRAAERLYKTQSAVSLQMKRLSEEVGEPLFCRKGKTLAL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLIS-LGDKY 118 + G++L +++ V S + I SG + I +GI + Y IIF ++++ ++Y Sbjct: 60 TEKGEKL--RMYAVRILKSHEEACIGLSGSGVAGNITLGISDEYTPIIFTKILAGFAERY 117 Query: 119 E----GVTAQPVEFSENGVIDNLFD 139 GV +P + V +NL D Sbjct: 118 PNVSVGVVCKPSPELKKRVDENLLD 142 >UniRef50_D1Y5H7 Transcriptional regulator, LysR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5H7_9BACT Length = 290 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 51/89 (57%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R F+ +A+ N ++AAE+++++ K++ +LE+++G +LF RK + LN G L Sbjct: 6 LRYFMTVAKYENFSKAAEELYISQPSISKAVLSLEKELGVSLFLRKGKRVQLNDTGLALK 65 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSREIVI 97 +KL PV L + E+ SR ++ Sbjct: 66 RKLEPVMSILDNLSKELRVVAGHSRSTIV 94 >UniRef50_A5VK31 Transcriptional regulator, LysR family n=14 Tax=Lactobacillus RepID=A5VK31_LACRD Length = 294 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 48/81 (59%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 ++ ++ F+ +AQTNNI +AAE++H+T + I LE ++ LF R++ + L KAG Sbjct: 3 TRVLKYFLTVAQTNNITKAAEQLHITQPTLSRQIMDLETELDIKLFNRENRRLQLTKAGI 62 Query: 66 ELYQKLFPVYQRLSAIDNEIH 86 Q+ + Q L +N++H Sbjct: 63 LFQQRATTMLQLLDQTENDLH 83 >UniRef50_Q13PS6 Transcriptional regulator, LysR family n=36 Tax=Proteobacteria RepID=Q13PS6_BURXL Length = 316 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 68/296 (22%), Positives = 125/296 (42%), Gaps = 14/296 (4%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE- 66 +++ FI ++Q + A +I +T S + LEE++G+ LF R + +LN AG+E Sbjct: 26 ELKTFIAVSQYGTFSGAGARIGLTQSAVSAQMQRLEEELGFALFDRTGRSATLNDAGRET 85 Query: 67 --LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQ 124 L +++ +Y RLS SG V I + + + D L D G + Sbjct: 86 LALAEEMMTLYARLSERGAVAAESGMLR---VGAIASAQVSFLADALARFRDDRPGWRIR 142 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRL--GFLVSRRYEER 182 V G++ + +LD + + A ELE T+ P + L LV + R Sbjct: 143 VVPGVSLGLLGQVDSGELDLAVIIKPPFALPSELEWRTLVTEPFVLLVPKALVRGKGNAR 202 Query: 183 QEQELLQELPWLQMRFQNRANFEA-MIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 +ELL+ P+++ +R +F ++D +R +N + + V RG + Sbjct: 203 SWRELLRSEPFIRY---DRTSFGGRLVDRFLRRSRLNVHDVIELDELQGIVQLVARGIGV 259 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 +IP A PA + + Q + ++ R++ + + D GT+ Sbjct: 260 ALIPDSAGLGKWPAGVAALELGE--ATFQREIGLVQRPRHSRQAVAGVLADCIGTA 313 >UniRef50_B2TMS2 Transcriptional regulator, LysR family n=3 Tax=Clostridium botulinum RepID=B2TMS2_CLOBB Length = 299 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 43/280 (15%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R F+ +A+ +I AA+K++++ P K + LEE++G TLF R ++ L Sbjct: 1 MDI---RQLRYFLTIAEEGHITAAAKKLNISQPPLSKQLKLLEEELGVTLFNRTSRSLEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNT------------------ 102 AG L K + + + NE+ N E +GI Sbjct: 58 TDAGILLQNKSSQLLELYKSTVNEMKNF-NNGIEGTLGIGTVCSSGINVLPQKIKEFCKQ 116 Query: 103 YPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLT 162 YP I ++ YEG + + +E NGVID F R+ F +S + LEN Sbjct: 117 YPKIDYEI-------YEGNSFKIMELLNNGVIDVGFVRE-PFNLSLYNSFVIKDNLEN-- 166 Query: 163 ISELPPLRLGFLVSRRYEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGIN 218 L + S+ Y + + L++ P + R ++ +I + G Sbjct: 167 --NLNDYFVAIAKSKFYNSIESNTILINKLKDKPLIINR-----RYDDIIKSACNKAGFE 219 Query: 219 PTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLK 258 P II + + +S E G ++++P A ++ LK Sbjct: 220 PHIICKNDDIITSLSWAEAGIGISILPLTASNILPNVNLK 259 >UniRef50_C8NRP5 Transcription regulator n=2 Tax=Corynebacterium efficiens RepID=C8NRP5_COREF Length = 309 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 11/167 (6%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 +++++ F+ +A N +RAA+ +H++ P + I LE+QIG LF R + L AG Sbjct: 4 ARQLKYFLAVASARNFSRAADDLHISQPPLSRQIRLLEKQIGTPLFERTSQGVELTAAGS 63 Query: 66 ELYQKLFPVYQRLSAIDNEIHNSGRRSREIV-IGIDNTYPTIIFDQLISLGDKYEGVTAQ 124 L ++ + L ++ ++ G+ S ++ +G T + QL+ K + Sbjct: 64 FLAERAPAILNELEEVERDVRAIGQGSMGVLRLGFVGTATHQLMPQLL----KQITIQLP 119 Query: 125 PVEFSENG------VIDNLFDRQLDFIISPQHVSARVQELENLTISE 165 VE +G + LF RQLD + VS+ ELE+ + + Sbjct: 120 EVEVRVSGEKLTPDLERLLFTRQLDAAVLRPPVSSPDIELESFGVDD 166 >UniRef50_C0BY92 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=C0BY92_9CLOT Length = 311 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 59/296 (19%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 F+ LA + AA+K+ +T +I++LEE++G +LF R+ N++L K Y +L Sbjct: 24 FVTLAHMEHYTNAAQKLSITQPSLSHAISSLEEELGTSLFERQGRNVALTK-----YGRL 78 Query: 72 FPVY--QRLSAIDNEIHN----SGRRSREIVIGIDNT-----YPTIIFDQLISLGDK--- 117 F Y + L +D I + RS ++ IG T P +I L + DK Sbjct: 79 FMEYAEEALDILDAGIKKTRAMTSERSGKVDIGYIYTQGSEFIPEVISGFLEANRDKKVE 138 Query: 118 ---YEGVTAQPVEFSENGVIDNLFD----------RQLDFIISPQHVSARVQELENLTIS 164 GVT + VE GV + +D ++LDF+ Q E L I+ Sbjct: 139 FGFSNGVTKEIVE----GVKEEKYDIGFCSMVTGEKELDFVPVSQ---------EKL-IA 184 Query: 165 ELPPLR-LGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIY 223 +PP L S R+EE + P Q+ F + +I + GI P I+Y Sbjct: 185 AVPPEHPLAEKKSVRFEE------IASYP--QIFFNRGSGLRGVISQIFKDYGIKPDIVY 236 Query: 224 RPYSFMAKISAVERGHFLTVIPHFAW-RLVNPATLKYFDAPHRPMYMQEYLYSIRN 278 A + V RG + ++P A R + + L+ D +R Y+ +++N Sbjct: 237 TVDEDSAMVGLVARGFGVGIVPDAATVRSMKASFLEIEDLDYRRFI---YMVTLKN 289 >UniRef50_Q65SQ8 LysR protein n=7 Tax=Pasteurellaceae RepID=Q65SQ8_MANSM Length = 298 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 12/138 (8%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R F+++A+T + +A ++ ++ S SI +EE++ LF R +IS +AG++LY Sbjct: 8 LRAFLVVARTGSFTKAGAQMGVSQSALSHSIRGIEERLNIKLFHRTTRSISTTEAGEQLY 67 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSREIVIGI------DNTYPTIIFDQLISLGDKYEGVT 122 Q+L P++ IDNE+ N R V G ++ + + D+ + KY V Sbjct: 68 QRLSPLF---DDIDNEL-NELSEFRNAVTGTLRINGNEHAFYYALGDKFVRFSQKYPEVN 123 Query: 123 AQPVEFSENGVIDNLFDR 140 + V +EN ID + +R Sbjct: 124 LELV--AENRFIDIVAER 139 >UniRef50_C6JG59 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG59_9FIRM Length = 300 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 1/138 (0%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R F ++ ++I +AAE++++T +I LE + G +LF RK N + L + G+EL Sbjct: 5 QLRYFCTASRCHSITKAAEELYVTQPTVSVAIRDLEIEFGISLFYRKGNRLILTEEGEEL 64 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQ-LISLGDKYEGVTAQPV 126 Y K + Q + + + + R + IGI T+ F + LI+ D+Y + Sbjct: 65 YNKATYILQYCTELQADYSSMARVKPPLRIGIPPMLSTVFFPELLIAFHDQYPEIAVVLE 124 Query: 127 EFSENGVIDNLFDRQLDF 144 E+ + + D LD Sbjct: 125 EYGSVRACNLVQDDTLDL 142 >UniRef50_D0L5B8 LysR substrate-binding protein n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L5B8_GORB4 Length = 290 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 1/106 (0%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R F++ A+T + AA+++H++ S F +IAALE+++G LF R ++L Sbjct: 1 MDITF-QQLRCFVVTARTLHFGNAAQELHISPSTFSDTIAALEKRVGRKLFRRDPRRVAL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTI 106 +AG EL V + A+ + I + I +G+ + P I Sbjct: 60 TEAGAELLPLAQQVQSSMDAVGSWIRDEDPDIGTIRVGLMVSSPRI 105 >UniRef50_A6EE41 Transcriptional regulator, LysR family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EE41_9SPHI Length = 290 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 25/278 (8%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ FI A+ + AA +T S + I LEE++G LF R + L +AG Sbjct: 4 RQLNYFIKAAELLHFTEAAAASFVTQSTLSQQIKQLEEELGMLLFDRIGKQVRLTEAG-- 61 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR--------SREIVIGIDNTYPTIIFDQLISLGDKY 118 KLF + R +D I S + + E+ IG+ + +++ L KY Sbjct: 62 ---KLFLSHARQIMLD--IKKSKQAIFELNNLINGELKIGVTYAFSSLLLPALRPFSKKY 116 Query: 119 EGVTAQPVEFSENGVIDNLFDR-QLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 G+ +E+ G ++ R LDFI++ S E+L + L R+ +V++ Sbjct: 117 PGIMIH-IEYGIAGELETKLRRADLDFILAFHEQSPN----EDLEMQHLFSSRIKMVVAK 171 Query: 178 RYEERQEQEL-LQELPWLQMRFQNRA-NFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + Q ++ ++EL ++M N+ + +ID + INP I + +S V Sbjct: 172 KNPLAQMSKISIKELGQVEMILPNKGFSSRDLIDEIFKKNKINPQIKIEMNDTHSLLSLV 231 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYL 273 E G+++T+I A + N L + +Y Q Y+ Sbjct: 232 ETGNWVTIINEKA--IGNWKNLVAVPISGKELYKQAYI 267 >UniRef50_A0QSQ3 LysR-family protein trancsriptional regulator n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QSQ3_MYCS2 Length = 296 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 47/93 (50%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +K+R F+ +A+ N RAA+++H+ + I A E ++G LF R N L+ AG + Sbjct: 12 RKLRYFVAVAEELNFGRAAQRLHIAQPVLSRQIRAFENELGVQLFVRGSNGTQLSAAGAQ 71 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGI 99 L Q + A+ + + SR + +G+ Sbjct: 72 LLQDAKVLLDDAKALQQRLFQAASPSRTVTVGV 104 >UniRef50_C0CUW8 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUW8_9CLOT Length = 332 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 2/137 (1%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 I L + + +RAAEK ++ KSI LEE +G LF R I+L AG+ + + Sbjct: 14 LIALDECKSFSRAAEKCFISQPALTKSINKLEESLGVRLFDRSKTPIALTYAGEHYLRGV 73 Query: 72 FPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISL-GDKYEGVTAQPVEFS 129 + + +D E+ +G R + +GI + Q++ L + Y V Q E + Sbjct: 74 RNIMAMKTQLDLEMAEIAGNRKEHLAVGIPESRGQKWLGQILPLYAEAYPDVDIQIFEST 133 Query: 130 ENGVIDNLFDRQLDFII 146 G+ + L + ++D II Sbjct: 134 SQGLEEALIEGKIDLII 150 >UniRef50_A9BPG7 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BPG7_DELAS Length = 354 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 27/174 (15%) Query: 10 RNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQ 69 R FI +A+ ++ RAAE+ MT S + + ALE ++G L R N+ L +AGQ LY+ Sbjct: 41 RVFIDIAEAKSLTRAAERGGMTRSNVSRRLRALETEMGAQLLRRTTRNVELTQAGQLLYR 100 Query: 70 KLFPVYQRLSAIDNEIHN-----SGRRS------------REIVIGIDNTYPTIIFDQLI 112 + + + L + IH SG + +++G +P I LI Sbjct: 101 RCLAMMEELQRARDAIHQLRSTVSGEVGVRVPTGFGHFYLKPLILGFCREHPDIRLRLLI 160 Query: 113 SLGDKYEGVTAQPVEFS--------ENGVIDNLFDRQLDFIISPQHVSARVQEL 158 + D+ + A V+ + ++ V L D + +F+ +P + A Q L Sbjct: 161 N--DQMADLVASKVDLAVQITSAPLDDLVATRLCDVRWNFVATPACLQALEQSL 212 >UniRef50_D2B6U1 DNA-binding transcriptional regulator CynR n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B6U1_STRRD Length = 301 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 32/255 (12%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R I +A+ N RAAE + ++ + I LE +G L R ++ L AG+ Sbjct: 6 RHLRYLIAVAEHGNFTRAAEDLRISQPTLSQQIKQLERAVGVQLLDRSGRSVRLTDAGEA 65 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 + LSA + + + SR + + T+ + LI+ + ++ G+T Sbjct: 66 YVHYARRALRDLSAAERAVFDVADLSRGSLRLAATPTFTAYLIGPLIAEMHARHPGITLD 125 Query: 125 PVEFSENGVIDNLFDRQLDFIIS--PQHV-----SARVQELENLTIS-------ELPPLR 170 E +++ + L +LD I+ +H+ +A E +L +S L P+ Sbjct: 126 VKEMTQDRIESGLLADELDLGIAFCDRHLPGIGGTALFMETLSLVVSAHDSDGEHLRPMP 185 Query: 171 LGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMA 230 + L +RR L L F R + IDA R ++P I+ S A Sbjct: 186 VRDLATRR------------LALLSGEFATRGH----IDAYFRRQSVSPRIVVEANSIQA 229 Query: 231 KISAVERGHFLTVIP 245 I V+R TV+P Sbjct: 230 LIEIVQRSSVATVLP 244 >UniRef50_Q21FK9 Transcriptional regulator, LysR family n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FK9_SACD2 Length = 296 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 84/160 (52%), Gaps = 8/160 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+ F ++ F +A+ +I +AAE++++T +A LE+ +GY+LF R + L Sbjct: 1 MEQFNWNHLKYFYHVAREGSITKAAERLYVTPQTISSQLALLEDSLGYSLFDRHGKRLKL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIV-IGIDNTYPTI----IFDQLISLG 115 N+ GQ + + +++ + E+ N+ +R +V IGI ++ P I I D++ S Sbjct: 61 NQEGQLVLRYAEDIFKTGRELLAELKNAELSTRRVVSIGILDSIPKILSCQILDRVYSTS 120 Query: 116 DKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARV 155 + VT + +F + ++ +L +LD I+S + V V Sbjct: 121 ENIRIVTHE-TDFEQ--LLADLALNKLDMILSDRPVPPNV 157 >UniRef50_A9HWS3 Transcriptional regulator, LysR-family n=8 Tax=Burkholderiales RepID=A9HWS3_BORPD Length = 339 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 36/58 (62%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAG 64 K + F+ LA+T N RAAEK+HM P SI LE ++G TLFTR + + L ++G Sbjct: 46 KHFQQFLTLAETLNFRRAAEKLHMAQPPLSVSIRKLEAEVGVTLFTRGKDGVKLTESG 103 >UniRef50_UPI0001973473 transcriptional regulator, LysR family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973473 Length = 282 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 65/130 (50%), Gaps = 2/130 (1%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R F A ++ AA+ +H++ +++ LEE++G TLFTR N + LN+ G+ Sbjct: 6 ELRQFAAFAGCGTLSDAAKLLHLSQPALSRNMKKLEEELGVTLFTRTKNRLELNENGKYA 65 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVE 127 Q + + ++ +I R++R + IG+ + P I I ++Y +T Q Sbjct: 66 LQLIQKIMDDADSLPVKIREFDRKNRTLTIGVCSPAPIWILTPFIY--NQYPHMTIQTEM 123 Query: 128 FSENGVIDNL 137 E +++ L Sbjct: 124 ADEEVLLEGL 133 >UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=Edwardsiella RepID=C5BDD2_EDWI9 Length = 330 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 72/143 (50%), Gaps = 3/143 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + ++ FI +A+ + RAAE+++++ P + I +LE ++G L R + ++SL +AG Sbjct: 23 RHLKYFIAVAEERHFNRAAERLNISQPPLSQQIQSLERELGACLLMRTNRSVSLTQAGSL 82 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTI--IFDQLISLGDKYEGVTA 123 ++ + + +L + + R + ++ IG ++ P I + L S +Y V Sbjct: 83 FLKECYSIVGQLEQAAEKAARAHRGETGDLTIGFTSSVPFIPRVAHSLFSYRHRYPQVHL 142 Query: 124 QPVEFSENGVIDNLFDRQLDFII 146 Q E + I+ L D +LD I Sbjct: 143 QMRELNTKQQIEPLVDGKLDIGI 165 >UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=Exiguobacterium RepID=C4L1Y9_EXISA Length = 294 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/244 (22%), Positives = 112/244 (45%), Gaps = 12/244 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 ++M+ FI +A+ + RAAE +H+T K+I LE+++G LF R+ I L G+ Sbjct: 4 REMQYFIAVARAKSFTRAAEALHVTQPTLSKTIRHLEQELGVELFDRQRRQIELTDVGEA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIV-IGIDNTYPTIIFDQLISL-GDKYEGVTAQ 124 L + + ++L + N + + R ++ +G+ ++ F + +++ Y + + Sbjct: 64 LMLESELLIRQLEDLPNHVFDITNSKRGLIRLGLPPLIGSLFFTKFLTVFHSSYPNIRVE 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E + + L +LD I + S+ +E +T EL +L R ++ Sbjct: 124 ITEAGGHTLEHALEKGELDVIATVLPTSSTFEETPFVT-EEL----YAYLPERHPLASRK 178 Query: 185 QELLQEL---PWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 Q LL+EL P+ + F + + ++ G P +I + +V +G+ + Sbjct: 179 QLLLEELASEPF--VLFTDEFSLHHVVRTACEQAGFTPRLIGESGQWDFLCMSVAQGNAV 236 Query: 242 TVIP 245 T++P Sbjct: 237 TILP 240 >UniRef50_A1S338 Transcriptional regulator, LysR family n=16 Tax=Shewanella RepID=A1S338_SHEAM Length = 302 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 1/142 (0%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K + F+ LA+T + RAAEK+H+T K + LE+ L R + +SL +AG+ Sbjct: 6 KNLHCFVTLAETGSFTRAAEKLHLTQPTLSKMLQRLEDHWQQQLIIRNNQKLSLTQAGEL 65 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQP 125 L + + + ++ ++ N G + + +G+ +++ + L + +Y GV + Sbjct: 66 LLEHAREMLGQWHLLEEDLSNLRGVQRGYLRLGVCPMMSSLVIELLTAFRARYPGVRLEM 125 Query: 126 VEFSENGVIDNLFDRQLDFIIS 147 E+ G L LD + Sbjct: 126 FEYGGFGCEKALLANNLDIAFT 147 >UniRef50_A1WN40 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WN40_VEREI Length = 300 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 6/105 (5%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R F ++A+T+N+ AA ++++T S + IA LE +G L R+ + +SL +AG Sbjct: 11 LRVFEVVARTHNLTAAAAELNVTQSAVSRQIATLETYLGMELLRRERHGVSLTRAGHSYA 70 Query: 69 QKLFPVYQRL-SAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLI 112 Q+L P ++++ SA + SG R+ + TY T LI Sbjct: 71 QQLLPAFEQIASATRALVKGSGERALRV-----RTYTTFAAKWLI 110 >UniRef50_Q0RY04 Transcriptional regulator, LysR family protein n=5 Tax=Rhodococcus RepID=Q0RY04_RHOSR Length = 305 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/248 (19%), Positives = 111/248 (44%), Gaps = 8/248 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R +A+ ++A AA +++T S + +A LE+++G L + + L +AG+ Sbjct: 5 ERIRALCAVAEQGSVAAAARSLYVTPSGVSQQLAKLEKEVGVALLVQVGRGVQLTQAGRL 64 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 L Q+ + L+ ++E+ + + E+ IG ++ ++ + I+ + + G+ Sbjct: 65 LAQRGQDIISLLAQAESEVASLDSDVAGELRIGSFSSASRVVVPRAIARMRQLHPGLEVS 124 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISEL--PPLRLGFLVSRRYEER 182 V + ++ + R+LD + V+ + E++ + + + R Sbjct: 125 FVAGDTDDLLPAVVGRELDLAVVDSWVTMPLHLPEDVICTPIHQDVADVALPADHRLAAA 184 Query: 183 QEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 ++ EL + ++PW R +F + +R G+ P I Y F A++ V G Sbjct: 185 EQIELDEVADMPWTTWR--KGESFHTWLVQTLRMRGVEPEIRYEVPEFAAQLEFVAHGLA 242 Query: 241 LTVIPHFA 248 +IP A Sbjct: 243 AALIPRLA 250 >UniRef50_Q7W5S7 LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7W5S7_BORPA Length = 315 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F++LA+T + RAA ++ + P + I LEEQ+G TLF R +SL AG Sbjct: 19 RHLRYFLMLAETLHFGRAASRLGIAQPPLSRQIRDLEEQVGATLFYRGTRGVSLTDAGVA 78 Query: 67 LYQKLFPVYQRLSAIDNEIHNS-----GRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEG 120 Q+ Q ++A D + + GR R IVIG ++ + +++ K+ G Sbjct: 79 FAQR---AAQIVAAADEAVFEAREAGQGRTGR-IVIGFVHSLAYSLLPRVLPGFRQKHPG 134 Query: 121 VTAQPVEFSENGVIDNLFDRQLD 143 + E + L Q+D Sbjct: 135 IAVSLREVTVADKESALLSGQID 157 >UniRef50_A8GBI4 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=A8GBI4_SERP5 Length = 309 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 3/106 (2%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 ++ F+++AQ N AA+ +H+T + I LE+Q+GY LF+R+ ++L G L Sbjct: 11 LKTFVVVAQRLNFTHAAQSLHLTQGAVSRQILGLEQQLGYPLFSRRARGLTLTPQGAML- 69 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISL 114 L PV Q L +D + G + + I + ++I L Sbjct: 70 --LAPVQQALGQLDEALARVGAQPGTLRIKCPTCAMRWVLPRIIRL 113 >UniRef50_C5EF34 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EF34_9FIRM Length = 291 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 54/87 (62%), Gaps = 3/87 (3%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R F ++A+ N+ +AA ++ ++ K+I+ALE+++G LF R++ +I LN+AG+ Sbjct: 7 QLRYFCVVAKHQNMTKAAAELMISQPALSKTISALEKELGTPLFVRRNRSIFLNRAGEIF 66 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRSRE 94 YQK + Q ++ ID+ + S E Sbjct: 67 YQK---IDQSINLIDDTVSEVRELSNE 90 >UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q12AP3_POLSJ Length = 303 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 106/258 (41%), Gaps = 29/258 (11%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ LA+ N RAAE++H+T S I LEE+IG LF R + + + G+ Sbjct: 4 RHLRYFVALAECLNFTRAAERVHITQSTLSHQIRQLEEEIGELLFERVGKRVLITERGE- 62 Query: 67 LYQKLFPVY--QRLSAIDNEIHNSGRRSREIV----IGIDNTY-PTIIFDQLISLGDKYE 119 LF Y + L +D + +R + IG +T+ I + + +L ++ Sbjct: 63 ----LFLSYAAKALKEVDQGVAALKESARGLTGKLRIGSTHTFNQGFIPECIATLLVRHP 118 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIIS--PQHVS-----ARVQELENLTISELPPLRLG 172 V EF+ + + + L LD IS P+ V E L +S PL Sbjct: 119 TVKVAASEFTADDIGERLASGALDLGISYRPRTVGDLWFEPLYNEQMVLVVSPQHPL--- 175 Query: 173 FLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 + R R + Q L L F R AM+D R C P ++ + + Sbjct: 176 ---AGRKRIRLVELHRQPLVLLPEAFATR----AMLDECFRACDAEPLVVVEMNTLAPML 228 Query: 233 SAVERGHFLTVIPHFAWR 250 + VER ++ A R Sbjct: 229 ALVERTQIGAIVSENAVR 246 >UniRef50_Q0K3L0 Transcriptional regulator, LysR-family n=2 Tax=Proteobacteria RepID=Q0K3L0_RALEH Length = 305 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 49/105 (46%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 F + +R F L+AQ + +AA K HMT S K IA LE +G LF R + L A Sbjct: 7 FDLQSLRVFQLVAQCGGLTQAANKSHMTLSALSKRIADLERTVGCALFLRVRRGLELTPA 66 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIF 108 G EL Q V +++ + E+ + R V NT I F Sbjct: 67 GHELVQHARMVLDKVNQMAGEMSDFATGVRGHVKVWANTSAVIQF 111 >UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepID=A9WGB3_CHLAA Length = 304 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 34/235 (14%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F+ +A+ +I RAAEK++++ + I LEE+IG LF R I L AG+ Sbjct: 4 RQLRYFLAVAEEGHITRAAEKLYISQPALSQQIKLLEEEIGTVLFDRIGRRIRLTAAGEI 63 Query: 67 LYQKLFPVYQRLS----AID--NEIHNSGRR-----------SREIVIGIDNTYPTIIF- 108 L Q LS AID N + R ++V N YP I Sbjct: 64 LVAHARRALQELSEAQVAIDELNGLQRGMLRIGVVQTVNAYLMPDLVAAFTNAYPAISLQ 123 Query: 109 ---------DQLISLGDKYEGVTAQPVEFSENGVI-DNLFDRQLDFIISPQHVSARVQEL 158 +Q ++ GD G+ P E + GV + LF L ++S QH A + +L Sbjct: 124 IEELATRDIEQRLADGDLQIGIGFVPPETA--GVTGEELFSEDLVVVVSRQHPWADLPQL 181 Query: 159 ENLTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMR 213 ++ + P + L+S + R+ + + +Q R Q N I A +R Sbjct: 182 PVQSLHQQPLI----LLSTTFCTRRLWDRCTHIAGIQPRVQIEMNTIGSILAAVR 232 >UniRef50_P52670 HTH-type transcriptional regulator ilvR n=98 Tax=Bacteria RepID=ILVR_CAUCR Length = 296 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 15/160 (9%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI ++ R+F +A+T + RAAE++ +T P +SI ALE+ +G LF R ++ L Sbjct: 1 MDI---RQFRHFAAVAETLHFGRAAERLGITQPPLSQSIQALEKALGAPLFARTKRHVEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIG------IDNTYPTIIFDQLISL 114 G+ Q L V + L+A+D + ++ RR R+ G + +++ D + Sbjct: 58 TALGR---QWLPHVLEALAAVDA-LPDTARRLRDGQTGYLSLSFVSTADYSVLPDLVRRY 113 Query: 115 GDKYEGVTAQPVEFSENGVIDNL--FDRQLDFIISPQHVS 152 + + GV Q VE + + + + +R II P + S Sbjct: 114 AEAFPGVEIQLVEATSDVQVPAIQAGERHAGIIIPPPNRS 153 >UniRef50_D2T733 Transcriptional regulator of levansucrase n=5 Tax=Erwinia RepID=D2T733_ERWPY Length = 266 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 43/76 (56%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 +FISK M+ FI L Q ++ AA+K+ +T P + + E +G LF + NNI+ Sbjct: 1 MFISKSMQVFITLYQEKSLKTAADKLCLTVPPVSRMLKLTEGWVGEQLFIIERNNITPTP 60 Query: 63 AGQELYQKLFPVYQRL 78 A +YQ+L P+Y L Sbjct: 61 AADCIYQQLLPLYMAL 76 >UniRef50_B8CTJ9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CTJ9_SHEPW Length = 295 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 7/172 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I I K + F+ L + N RAAEK+H+T K I LEE +G L R + + Sbjct: 1 MNIQI-KNLHCFVTLVEMGNYTRAAEKLHLTQPTLTKMIQRLEENLGQPLLIRNNQKVIA 59 Query: 61 NKAGQELY---QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDK 117 +AG+ L Q++ + RL N ++ G ++ ++ +G+ +I + + K Sbjct: 60 TEAGRALICTSQQIVGQWHRLREDLNSLN--GLQTGQLRLGVCPMMGEMIIELVAQFRKK 117 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPL 169 Y GV E G L + LD + + QE ++L + P L Sbjct: 118 YPGVELSIQELGGFGAEQALLNDSLDLTFTALPTT-HTQEFDSLELRGYPLL 168 >UniRef50_B2TCR3 Transcriptional regulator, LysR family n=3 Tax=Burkholderia RepID=B2TCR3_BURPP Length = 298 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 43/62 (69%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 S +R F+ +A T +++ A+E++H+T S + IA LE+++GY LF R+ ++L+KAG+ Sbjct: 3 SVALRYFLAVANTGSLSEASERLHVTISAISRQIAKLEDEVGYPLFERQPRGMALSKAGE 62 Query: 66 EL 67 L Sbjct: 63 LL 64 >UniRef50_C6B9Q5 Transcriptional regulator, LysR family n=3 Tax=Rhizobium RepID=C6B9Q5_RHILS Length = 290 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/270 (25%), Positives = 118/270 (43%), Gaps = 31/270 (11%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 ++ + FI++A+ +++A AA+++++T + + I ALE ++G L R + +AG Sbjct: 3 TRFLETFIVVAERHSLAEAAQRLNLTPAAVAQRIRALEAELGVRLLVRSGRVMRPTEAGF 62 Query: 66 ELYQK---LFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPT-IIFDQLISLGDKYEGV 121 + + L + L A+ SG E+ IG NT T ++ D L L Y + Sbjct: 63 AILDRCRDLVRDTRDLKAMAGTATISG----EMRIGAINTALTGLVPDILHRLAQDYPLI 118 Query: 122 TAQPVEFSENGVIDNLFDRQLD------FIISPQHVSARVQELENLTISELPPLRLGFLV 175 F + G +L+ L+ FII P R + LT ++L L + Sbjct: 119 EI----FLKPGASMDLYAEVLNGTLDAAFIIEP-----RFPMQKTLTFNKLRQEPLVLIA 169 Query: 176 SRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 R E ELLQ LP++ R+ + D +R GI P Y + A V Sbjct: 170 PRDCEGADPLELLQTLPFI--RYDRNQWGGHIADEYLREIGIRPVERYELDALEAIAVMV 227 Query: 236 ERGHFLTVIPHFA--WRLVNPATLKYFDAP 263 +RG ++++P +A W PA L P Sbjct: 228 DRGLGISIVPDWAPPW----PAGLDILKLP 253 >UniRef50_A8LUJ1 Transcriptional regulator, LysR family n=3 Tax=Rhodobacteraceae RepID=A8LUJ1_DINSH Length = 303 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 17/259 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ ++++ + +A T + A AA +++T S + I +LE +IG LF RK L Sbjct: 1 MDL---RQLQTLVAVADTGSFAAAAGVVNLTPSAISQQIQSLEAEIGAQLFDRKKRPRQL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPT-IIFDQLISLGDKYE 119 N G+EL + V Q L+ I GR + + +G T ++ + L + +Y Sbjct: 58 NAQGEELVRAARSVVQTLTEARMTIAG-GRTAGVLKLGAIRTVSMRLVPEALRGMRGRYP 116 Query: 120 GVTAQ-PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + + V SE + D R LD + +HV T+S P L ++ Sbjct: 117 DLGFEMTVGMSERLMADVAAGR-LDAALVAEHVGV------PATLSWSPVLNEPLVIIAP 169 Query: 179 YEE--RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 +E R E LL++LP++ R+ I+ + I P + + A + V+ Sbjct: 170 PQEAWRSEVSLLRDLPFI--RYATDVPLARQIETELSGLSIVPREVAVANTMPAVVGLVQ 227 Query: 237 RGHFLTVIPHFAWRLVNPA 255 G + V+P A PA Sbjct: 228 AGLGVAVVPRIATLHGGPA 246 >UniRef50_C9PJ12 Putative transcriptional regulator protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PJ12_VIBFU Length = 308 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI ++++ FI LA+ N AA+K+H+T S + + L +Q+ LF RK I L Sbjct: 1 MDISY-RQLKAFIALAEERNFTYAADKVHITQSALSQMMKKLAQQLSCELFERKGRTIVL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN 87 +AG LYQ+ + RL + E H+ Sbjct: 60 TEAGHHLYQEARFIVNRLEKLVQENHD 86 >UniRef50_Q12DG5 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12DG5_POLSJ Length = 289 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 36/268 (13%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++ F+ +A+ + +RAA ++H++ P + IA LE+++G L R + ++L Sbjct: 1 MDL---RQLSYFVAVAEELSFSRAASRVHISQPPLSRQIAKLEQELGAVLLIRSSHEVAL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEI-HNSGRRSR----EIVIGIDNTYPTIIFDQLISLG 115 +AGQ L ++ +RL A+ I GR SR + IG + I+ + +L Sbjct: 58 TQAGQALLEE----ARRLLALAAGIPEVVGRASRGETGSLRIGFVG---STIYTSVPALL 110 Query: 116 DKYE------GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPL 169 +Y V+ Q + + V+ L + ++D I Q V+ +L Sbjct: 111 SQYRQIYPHVAVSVQQLTVARQTVM--LKNSEIDVGIIRQAVTEPWLATRSL-------F 161 Query: 170 RLGFLVSRRYEER---QEQELLQELPWLQMRFQNRANFEAMIDANMRPC---GINPTIIY 223 + GF+ + R Q++ +LQ L F +R+ A+ + + C G +P I+ Sbjct: 162 KEGFMAALPVHHRLAGQDRVMLQSLAEDDFVFFSRSEAPAIHEQLRKMCEAAGFSPRIVQ 221 Query: 224 RPYSFMAKISAVERGHFLTVIPHFAWRL 251 Y + V G + ++P RL Sbjct: 222 EAYPMSTVVGLVAAGVGIAIVPESMQRL 249 >UniRef50_A5ET16 Putative transcriptional regulator n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ET16_BRASB Length = 295 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 6/136 (4%) Query: 18 TNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKLFPVYQR 77 N ARAA + + AS + IA LE+++G TLF R + L +GQ + + + V Sbjct: 15 AGNFARAALVLGLHASTISRRIARLEDELGLTLFERNRAGVRLTPSGQTVMRHIRRVLAE 74 Query: 78 LSAIDNEIHNSG-RRSREIVIGIDNTYPTI---IFDQLISLGDKYEGVTAQPVEFSENGV 133 + A+ H++G + EI +G+ P I + D L +Y GV+ E E + Sbjct: 75 VDAVKAAGHHNGLGTTGEIRLGL--RMPPIGKPLGDLLRCWHGRYPGVSVVQFEMHEREI 132 Query: 134 IDNLFDRQLDFIISPQ 149 L DR+LD P Sbjct: 133 AAALADRRLDAAFVPS 148 >UniRef50_A0KIU1 Transcriptional regulator, LysR family n=3 Tax=Aeromonadaceae RepID=A0KIU1_AERHH Length = 291 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 1/142 (0%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 ++ +R FI +++T + RAAE +++T S I LE+Q+G +LF R NNI L +G+ Sbjct: 3 TELLRTFIEVSKTRHFGRAAENLYLTQSAVSFRIRQLEQQLGVSLFARHRNNIRLTASGE 62 Query: 66 ELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIF-DQLISLGDKYEGVTAQ 124 L + L ++ S S+++ IG + + F D L + G+ + Sbjct: 63 RLLPYADAILHTLGRAKQDVALSPGFSQQLAIGAPAVFWELDFNDWLNHVYALAPGLAVR 122 Query: 125 PVEFSENGVIDNLFDRQLDFII 146 S + L +R LD + Sbjct: 123 LETASREHLCRQLLERSLDLAL 144 >UniRef50_UPI00016945D8 transcriptional regulator, LysR family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945D8 Length = 292 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 9/153 (5%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 +++ F +A+ ++ +AA+++H+ S ++I+ LEE +G +LF RK I LN GQ Sbjct: 5 QLKYFQKVAKIQHMTKAAQELHIAQSSLSRTISRLEEDLGVSLFERKGRQIHLNMFGQRF 64 Query: 68 YQKLFPVYQRLSAIDNEIHN-SGRRSREIVIG--IDNTYPTIIFDQLISLGDKYEGVTAQ 124 ++ ++ L EI G ++ +V+G I P +F + +++ + V Q Sbjct: 65 LNRVERIFTELEEGTEEIAELQGIENKRVVVGATITRLLPD-LFKEFLTV---HPDVKFQ 120 Query: 125 PVEFSENGVIDNLFDRQLDFIIS--PQHVSARV 155 +FS + + + +DF IS P H S V Sbjct: 121 LFQFSTTEIQEQIQQGTIDFCISSPPIHQSGIV 153 >UniRef50_Q0RGI7 Putative uncharacterized protein n=1 Tax=Frankia alni ACN14a RepID=Q0RGI7_FRAAA Length = 335 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 40/58 (68%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 ++R F+ +A+ ++ RAA ++H+T SP +SI ALE ++G LF R +++ L +AG+ Sbjct: 21 QLRAFVAVAEEGHVGRAATRLHLTPSPVSRSIRALEHELGVELFARGHHSLELTEAGR 78 >UniRef50_C1D6W2 Probable transcriptional regulator, LysR family n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6W2_LARHH Length = 306 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 27/230 (11%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I+ ++R F+ +AQ ++ +AAE +H++ I ALEE +G LF R + I L Sbjct: 1 MEIY---QLRTFVTVAQQGHLTQAAELLHLSQPAVTAQIKALEEDVGMPLFERSASGIRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-----SGRRSREIVIGIDNTYPTI-IFDQLISL 114 + G++ L P Q + + ++ N G+ + IVIG T + I + SL Sbjct: 58 TRLGED----LLPRAQDILSASRDMLNHAKSLKGQFAGRIVIGTITTPEIVHIGPWVASL 113 Query: 115 GDKYEGVTAQPVEFSENGVIDNLFDRQLD--FIISPQHVSARVQELENLTISELPPLRLG 172 ++Y + Q +++ + +++D F + H + ++ + E+P + Sbjct: 114 INRYPLIDIQIRHGVTGEILNQVRKKEIDVGFYLGKNHYV----NVNSVKLKEIP---MR 166 Query: 173 FLVSRRYEERQEQELLQE---LPWLQMRFQNRANFEAMIDANMRPCGINP 219 +V + +R E ++E LPWL M ++F + R I P Sbjct: 167 IVVPVAWRDRVEAGGVKELGKLPWLGM--SQHSSFSKLTSELWRELNIAP 214 >UniRef50_A4NT13 LysR protein n=6 Tax=Proteobacteria RepID=A4NT13_HAEIN Length = 296 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 3/74 (4%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 F+ LAQT + +A + + +++S S+ LE ++ L R N+SL +AGQ+L+ +L Sbjct: 10 FLTLAQTQSFVKAGQLLGISSSALSHSMKNLETRLNLRLLNRTTRNVSLTEAGQQLFDQL 69 Query: 72 FPVYQRLSAIDNEI 85 FP+YQ AI+ E+ Sbjct: 70 FPLYQ---AINQEV 80 >UniRef50_B8IFG1 Transcriptional regulator, LysR family n=5 Tax=Alphaproteobacteria RepID=B8IFG1_METNO Length = 300 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/249 (25%), Positives = 103/249 (41%), Gaps = 21/249 (8%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K + +F+ LA+T + +R+AE+ H+T S F + I ALE +G +L R +L AG+E Sbjct: 4 KWLEDFVSLARTGSFSRSAEERHVTQSAFSRRIQALETWLGVSLIDRSTYPTTLTAAGRE 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIV-IGIDNTYPTIIFDQLISLGDKYEGVTAQ- 124 + + L + S R S++ V + +T F + + + G Sbjct: 64 FREMAEEAVRMLHGSRAALQASARPSKQTVAVAALHTLALTFFPRWFRQIEAHTGPLGSR 123 Query: 125 --PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGF--LVSRRYE 180 P +F + I + + DF+++ H S + L ++ P +G LV+ R Sbjct: 124 LLPDDF--HNCIQAVAEGGYDFLLTFHHPSVPIL----LDPAQYPYCVVGADSLVAVRSA 177 Query: 181 ERQEQEL-LQELPWLQMRFQNRANFEAMIDANMRPCGI---NPTIIYRPYSFMAKISAVE 236 R + L L + Q F R A A P GI N + FMA Sbjct: 178 ARTDGSASLPLLSYAQNSFLGRVAIVAQAQAGEPPAGISHTNENAMAEALKFMAL----- 232 Query: 237 RGHFLTVIP 245 GH L +P Sbjct: 233 EGHGLAWLP 241 >UniRef50_B8CIE9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CIE9_SHEPW Length = 292 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 F +A+ ++ +A+EK ++ S + I +LEE +G LF R N +SL+ G + YQKL Sbjct: 11 FCQVAKYGSMKQASEKTRLSLSTVSRRIVSLEESLGIQLFIRNKNKLSLSNEGVKYYQKL 70 Query: 72 FPVYQRLSAIDNEIH-NSGRRSREIVIGIDNTYPT 105 + ++L+ +E++ NSG S IVI + T Sbjct: 71 STIVEQLANTIDELNDNSGLLSGHIVISTTKLFYT 105 >UniRef50_A8GJH0 Transcriptional regulator, LysR family n=6 Tax=Enterobacteriaceae RepID=A8GJH0_SERP5 Length = 310 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 15/147 (10%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K + F+ + + N A+AA+ +++T S GK+IA LEE++G TLF R N +L + G+ Sbjct: 6 KGIPVFVAVVECGNFAQAAQDLNITRSAVGKAIARLEERLGVTLFQRTTRNQTLTEEGEI 65 Query: 67 LYQKLFPVYQRLSAIDNEIHNSG-------RRSREIVIGIDNTYPTIIFDQLISLGDKYE 119 LYQ+ + ++ IH R S +++G P L+++ Y Sbjct: 66 LYQQSRIALDCIREAEDVIHLGKTQVKGRLRISLPVLLGQRCIAPI-----LLTIAKSYP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFII 146 + +E S N NLFD D + Sbjct: 121 QLK---LELSFNDRQVNLFDEGFDLAV 144 >UniRef50_A0P0H4 Transcriptional regulator, LysR family protein n=2 Tax=Rhodobacteraceae RepID=A0P0H4_9RHOB Length = 304 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 8/108 (7%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K+M FI +A+ + RAAE++++ P + I +EE++G LF R N ++L +AG+ Sbjct: 12 KQMSYFIAVAEELHFGRAAERLNVAQPPLSRQIKQIEEELGALLFNRGRNAVTLTQAGER 71 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR----RSREIVIGIDNTY---PTII 107 LY +L + L EI G+ R R +G +TY PTII Sbjct: 72 LYVRLQKILADLDDTKLEIRRLGQGAEGRLRIGFVG-SSTYGLLPTII 118 >UniRef50_C0ZAD7 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZAD7_BREBN Length = 289 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 31/249 (12%) Query: 13 ILLAQTN--NIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQK 70 +L+A TN N RA E+I ++ S +I ALE+++G +LFTR + + L AG+++ Sbjct: 8 VLVAVTNAGNFTRAGEQIGLSQSGVSHTIGALEKELGISLFTRNRSGVKLTAAGEKIVTS 67 Query: 71 LFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDK------------Y 118 + + +S I SG E + I + +P++ L L Y Sbjct: 68 ARIILENVSLIKQVAAESGEH-LEATLRIAS-FPSVTAQLLPKLLKSIESHYPHMQTKLY 125 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 EG + E+ +GV+D F D ELE + ++ L +V + Sbjct: 126 EGSYQEIKEWIRSGVVDVGFHVWPD------------DELEGILLTT---DALHAVVPAQ 170 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + +E L E + A +I A G+ PT+ Y ++ VE G Sbjct: 171 HPLAKEPSLTLEQLARESFLMPMAGCHLLIGAEFAKAGLTPTVSYEIADNTTILAMVESG 230 Query: 239 HFLTVIPHF 247 +T++P Sbjct: 231 VGVTIVPSL 239 >UniRef50_C9RY94 Transcriptional regulator, LysR family n=8 Tax=Bacillales RepID=C9RY94_GEOSY Length = 304 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 6/136 (4%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY--- 68 F+ + + N +AAE++HMT + I LE L R + + LNKAG+ +Y Sbjct: 8 FVKVVEKGNFTKAAEELHMTQPAVSQHIQTLERLFDTKLLYRTNKYVKLNKAGEIVYHYA 67 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQPVE 127 +++ +Y R++ + +++ N R S E+ IG TY + Q+I+ L Y + Sbjct: 68 KEILGLYTRMNQLLDDLMN--RASGELSIGASYTYGEYVLPQMIAKLHQHYPLIKPTITI 125 Query: 128 FSENGVIDNLFDRQLD 143 + N +++ + QLD Sbjct: 126 GNSNEIVEMVRGHQLD 141 >UniRef50_Q13JN6 Transcriptional regulator, LysR family n=7 Tax=Burkholderiales RepID=Q13JN6_BURXL Length = 312 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 3/81 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K +R F+ LA+T + RAA +++++ P + +AALE +G TL R +++L AG+ Sbjct: 29 KPLRYFVTLAETRHFGRAAARLNLSQPPLSRQLAALEASVGVTLVERSPRSVTLTAAGER 88 Query: 67 LYQKLFPVYQRLSAIDNEIHN 87 Y + L+A++ + N Sbjct: 89 FYADAKAI---LTAVEQAVSN 106 >UniRef50_A9AUC8 Transcriptional regulator, LysR family n=2 Tax=Chloroflexi (class) RepID=A9AUC8_HERA2 Length = 300 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 9/111 (8%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +K+R F+ AQ+ N RAAE++ +T + I LE ++G +LF R I L AG Sbjct: 5 QKLRMFVAAAQSRNFTRAAEQLDLTQPTVSQQIQTLERELGVSLFERLSRGIELTAAG-- 62 Query: 67 LYQKLFPVYQRLSAIDNEIHN-----SGRRSREIVIGIDNTYPTIIFDQLI 112 + L P +++ A++ +G+ R +++G+ NT T L+ Sbjct: 63 --RALLPHAEQMIALERIAEQAVRAAAGQSERTLLLGVGNTLATYALPDLL 111 >UniRef50_A9BPP0 Transcriptional regulator, LysR family n=8 Tax=cellular organisms RepID=A9BPP0_DELAS Length = 307 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 28/159 (17%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 F+ A+ + A+AAE++ +T S GK++A LEE++G LF R ++ L + GQ Y++ Sbjct: 15 FVASAEAGSFAQAAERLGLTRSAVGKAVARLEERLGARLFVRTTRSLGLTEDGQMFYER- 73 Query: 72 FPVYQRLSAIDNEIH--NSGRR--------SREIVIGIDNTYPTIIFDQLISLGDKYEGV 121 Q L +D H +GRR S +V G + P ++ +L L + Sbjct: 74 --CAQALEDLDAARHMLEAGRREVVGRLRISAPVVFGRHHVAPLLL--ELAQLHPRLR-- 127 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELEN 160 +E S DRQLDF ++ R EL + Sbjct: 128 ----IEAS-------FTDRQLDFADDGIDLAIRSGELPD 155 >UniRef50_B5JK93 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JK93_9BACT Length = 293 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 2/140 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R FI +A N+ RAAEK+H++ + + LEE++G+ L R ++SL +AG+ Sbjct: 4 RHLRYFIEVALEENVTRAAEKLHVSQPALSRQVRDLEEELGFALLERSAKSVSLTEAGRV 63 Query: 67 LYQKLFPVYQRLS-AIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQ 124 + V +RL + + S EI +G + I I + +Y V + Sbjct: 64 FLDEASAVLERLEVGVAAARAAAEDGSGEIHVGYAPSLTVKILPPTIRAFQAEYPKVKVK 123 Query: 125 PVEFSENGVIDNLFDRQLDF 144 + S ++D L +LDF Sbjct: 124 LYDMSTEEMLDGLRSGKLDF 143 >UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=Micrococcaceae RepID=A0JW92_ARTS2 Length = 306 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 ++ ++ FI +A+ + RAA ++HM P + I LEEQ+G L R + L AGQ Sbjct: 3 TRHLKYFIAVAEERHFGRAAARLHMAQPPLSQQIRQLEEQLGTPLMVRTTRKVELTPAGQ 62 Query: 66 ELYQKLFPVYQRLSAIDNEIHNSGRRSREIV-IGIDNT 102 L + + Q L +++++ G + ++ +G T Sbjct: 63 VLLDRGRVLLQELQVLESDVQQVGEGATGVLRVGFTGT 100 >UniRef50_A9ANF4 LysR family transcriptional regulator n=8 Tax=Proteobacteria RepID=A9ANF4_BURM1 Length = 296 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 2/139 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F +LA + RAA ++H++ P + I LEEQ+G LF R + + L +AG+ Sbjct: 4 RVLRYFAVLADELHFGRAAARLHISQPPLSQQIRLLEEQLGTALFVRSQHRVELTEAGKT 63 Query: 67 LYQKL-FPVYQRLSAID-NEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQ 124 L +++ V Q AID G + R V I + I L +++ V Sbjct: 64 LKEQVPLIVAQFDRAIDLTRCAGRGEKGRVAVGIISSAMVAPIPRALRVFAERHPHVQWS 123 Query: 125 PVEFSENGVIDNLFDRQLD 143 E + ID L +++LD Sbjct: 124 LHEMTPAAQIDALKEKRLD 142 >UniRef50_A8GI93 Transcriptional regulator, LysR family n=3 Tax=Enterobacteriaceae RepID=A8GI93_SERP5 Length = 292 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 33/192 (17%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K++R + +A+ + RAA++ H S IA LEE++G TLF R + L AGQ Sbjct: 4 KQIRFALAVAEEQSFTRAAQRCHTVQSALSHQIAKLEEELGCTLFERTSRRVRLTTAGQA 63 Query: 67 LY---QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNT----------------YPTII 107 Q+L Q L ++ + SG S + IG +T YP + Sbjct: 64 FIQPAQRLLAAKQAL--VEEVVAASGTVSGTLTIGTISTINAIDLTEKLGNFHRHYPAVN 121 Query: 108 FDQLISLGDK-YEGVTAQPVEFSENGV----ID-------NLFDRQLDFIISPQHVSARV 155 + + + E V Q + + G+ ID L D L +++ QH A Sbjct: 122 IRLYVGMSEALLEDVRQQKTDVAFVGLWPGDIDMLPVSHRQLTDEPLVALVATQHPLASR 181 Query: 156 QELENLTISELP 167 Q + T+SE+P Sbjct: 182 QRVNLQTLSEVP 193 >UniRef50_B4SSK9 Transcriptional regulator, LysR family n=3 Tax=Stenotrophomonas RepID=B4SSK9_STRM5 Length = 302 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A T + +AAE++ M+ P + I LE+ IG LF R + L AG+ Sbjct: 6 RHLRYFLAVADTLHFGQAAERLGMSQPPLSQQIRQLEDLIGARLFVRSHRRVQLTAAGEL 65 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTI--IFDQLISLGDKYEGVTA 123 L ++ + ++ + +E+ + R + E+ IG+ P I ++ +Y V Sbjct: 66 LQERARAIVLQVESAVDEVQRAQRGEQGELRIGLTRATPLSPQIPRSILQYRQRYPQVRL 125 Query: 124 QPVEFSENGVIDNLFDRQLDFII 146 Q E + ID L D LD I Sbjct: 126 QLSEMNTLQQIDALLDGSLDVGI 148 >UniRef50_D1PLB5 Transcriptional regulator, LysR family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB5_9FIRM Length = 293 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 15/148 (10%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 +++AQ A AAE++H+T S +++ +E + G+ LFTR + +++ AG+ L+ + Sbjct: 9 LMMVAQLGTFAAAAEQMHLTPSAISHAVSGMEAECGFPLFTRTKSGVTMTAAGESLFPSI 68 Query: 72 FPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISLGDK---------YEGV 121 + +D I +G + +G+ N+ QL+ + Y+G Sbjct: 69 RQMLNSSELLDQSIAQINGMHKGVLRVGVFNSACVTWIPQLVPPFQQEFPGIDVQLYQGS 128 Query: 122 TAQPVEFSENGVID-----NLFDRQLDF 144 A + +NGV++ N + LDF Sbjct: 129 YADIAGWLKNGVVELGFLSNSSAKDLDF 156 >UniRef50_Q2G7Q5 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G7Q5_NOVAD Length = 318 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 3/151 (1%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD F +++R FI +A T ++ RAA +++T + + +EE++G+ LF R ++L Sbjct: 21 MD-FDERQLRAFIAIADTGSLGRAARVVNLTQPSLSRLVQGIEERLGHRLFDRGGKGMAL 79 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIG-IDNTYPTIIFDQLISLGDKY 118 AG+ L + + +E+ G R + IG + T++ + S+ + Sbjct: 80 TDAGRLLLPHARHLVAEMQNTRDELAALRGLRRGTVRIGAVAAVLRTLVASAIGSVLVET 139 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQ 149 + + VE + ++D L R++D +S Q Sbjct: 140 PDLAFELVEGVDGELLDALLTRRIDLAVSSQ 170 >UniRef50_Q0AK17 Transcriptional regulator, LysR family n=3 Tax=Betaproteobacteria RepID=Q0AK17_NITEC Length = 302 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 38/59 (64%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 + +R FI+LA+ + RAAE++H+ SP +SI LE+++G LF R + SL AG+ Sbjct: 4 RHLRRFIVLAEELHFTRAAERLHIEQSPLSRSIKELEDELGVALFKRDRSGTSLTPAGE 62 >UniRef50_Q3K7P5 LysR family regulatory protein n=7 Tax=Pseudomonas RepID=Q3K7P5_PSEPF Length = 292 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 3/83 (3%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 + F++ AQ N RAAE++H+T + IA LEE +GY LF R + L G+E Sbjct: 10 LHTFLITAQCCNFTRAAEQLHITQGAVSRQIAGLEEHLGYELFIRLARGLELTAEGREWL 69 Query: 69 QKLFPVYQRLSAIDNEIHNSGRR 91 + V Q S I + + G + Sbjct: 70 PR---VQQVFSLIGDSVEQIGAK 89 >UniRef50_A6F002 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F002_9ALTE Length = 299 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 5/108 (4%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R F +A+ + +RAAE IH++ +++ LEEQ+G L R+ + L +AG ELY Sbjct: 6 LRTFASVAEQRSFSRAAEAIHISQPAVSRAVRELEEQLGMALLERRGGQVRLTEAGAELY 65 Query: 69 Q---KLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLIS 113 Q +F + Q SA+ + G + IG T T +I+ Sbjct: 66 QHARAIFALEQ--SAMADLRGRQGLERGSLTIGASRTIGTYFLPPVIA 111 >UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=Clostridiales RepID=B8FPA0_DESHD Length = 295 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 17/256 (6%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K + F+ +A+ + ++AAEK H+T S K I LE ++G +LF R + L G Sbjct: 4 KHLEYFVEVARQKSFSKAAEKCHVTQSTISKLIKDLEGELGTSLFNRTSKYVQLTDTGAI 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 + + + + +E N + R +I IG+ T +F +L+ KY + Sbjct: 64 FLDQALEIVTKFENLTHEFQNRIKLERGKIAIGLLPITGTTLFAELLGEFKKKYPQIEIS 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E VI ++ D LD + + Q E+ +E P L +VS R + Sbjct: 124 LSERGSKKVIMDILDGTLDVGVVCSVPDS--QYFESFAFAEDP---LYVIVSVRNPISKL 178 Query: 185 QEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSF--MAKISAVERG 238 + L + P++ + + + I + + G P II+ F M ++ A + G Sbjct: 179 ASIDLKSLADEPFV--LYSSEFSLHDEIISKCKNEGFAPNIIFETSQFELMTQMVAADLG 236 Query: 239 HFLTVIPHFAWRLVNP 254 + +P A R ++P Sbjct: 237 --IAFLPGAACREMDP 250 >UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3E5_THIIN Length = 301 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 2/143 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F+ +A+ + +RAAE++H++ P I ALE++IG L R + ++L AG Sbjct: 4 RQLRYFVTIAEQGSFSRAAERLHISQPPLSTQIKALEDEIGARLLERSNRGVTLTAAGAA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP-TIIFDQLISLGDKYEGVTAQ 124 ++ + V +L + + R + + IG + I+ L S +Y V Q Sbjct: 64 FFEDIRSVLAQLEHAVERVRQAERGDAGTLSIGFVSIADFGILPPTLKSFRARYPQVDVQ 123 Query: 125 PVEFSENGVIDNLFDRQLDFIIS 147 E + + I L +LD I Sbjct: 124 LHELTTDAQIRELRAAELDLSIG 146 >UniRef50_B1ZQE5 Transcriptional regulator, LysR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZQE5_OPITP Length = 291 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 4/141 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F +A+T + +RAAE++H+T + I LE ++G TL R L AG+ Sbjct: 4 RHLRYFCAVAETLHFSRAAERLHVTQPALSRQIRDLEAELGVTLLRRHHTATVLTPAGEA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFD-QLISLGDKYEGVTAQP 125 ++ + L+A + + + R++ G T T F L ++ G QP Sbjct: 64 FLRR---AREILAAAGEAVSEARQAGRQLRFGHYGTLWTECFGPALRRFAKQHPGCALQP 120 Query: 126 VEFSENGVIDNLFDRQLDFII 146 +E ++ L ++LD + Sbjct: 121 IELMPVELVAALRRQELDIAL 141 >UniRef50_C5EG08 Regulatory protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG08_9FIRM Length = 297 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 55/248 (22%), Positives = 117/248 (47%), Gaps = 21/248 (8%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 ++++ F+ L+++ +I++AA+++ ++ KSI LE ++ LF R I L+K+G Sbjct: 4 RQIQYFMKLSESTSISQAAKELFISQQALSKSIKNLESELNTRLFLRTSKGIKLSKSGVY 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGID-NTYPTIIFDQLISLGDKYEGVTAQ 124 L K PV E + + + I IG+ + ++ + L++ Y G+ + Sbjct: 64 LKHKFLPVCAGYEEAVRESYQYFKIQQGTITIGVAPGVFRSLSANYLLNFETLYPGLKLE 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQH---VSARVQELENLTISELPPLRLGFLVSRRYEE 181 VEF + D + +++++ H +S + + L S L ++ F+ R + Sbjct: 124 QVEFPD-------LDME-EYVLADSHRFALSTKPWHDQGLQYSPLHREKMFFIAHREHPL 175 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRP--YSFMAKISAV 235 +++E+ L + +L F +R N + + G P IIY+ S + K+++ Sbjct: 176 AKQEEIHVSQLADEDFL--FFNSRYNIHYRTKDSCKKAGFTPHIIYKSSDVSQLVKMASQ 233 Query: 236 ERGHFLTV 243 ++G L V Sbjct: 234 KQGILLCV 241 >UniRef50_C6C1H7 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1H7_DESAD Length = 304 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 8/152 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R FI +A+ + RAA ++H+ PF + I LEE++G L R + L G+ Sbjct: 4 RQLRYFIAVAEELHFGRAARRVHIAQPPFSQQIKGLEEEVGARLLERNSRKVRLTNEGRY 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLI-----SLGDKYEGV 121 Y++ + ++ + GR ++ I + I D L+ S +Y GV Sbjct: 64 FYKQALDI---VAQAEEAAATVGRMAKGEYGNIKVGFMEIAMDSLLPEAVRSFSHRYPGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSA 153 + + +F + ++ + +LD S ++ A Sbjct: 121 SVRLSQFGASIQLERIHSGELDVGFSTVYLRA 152 >UniRef50_A5WF28 Transcriptional regulator, LysR family n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WF28_PSYWF Length = 293 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 55/282 (19%), Positives = 125/282 (44%), Gaps = 16/282 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLF----TRKDNNISLNK 62 K++R F+ + +T +A+ ++++T KSI +LEE +G LF T + ++L + Sbjct: 5 KQLRCFVTVVKTGGFLQASIQLNLTQPTVTKSITSLEEYLGVALFDKPLTHRKRLVNLTE 64 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLISLGDKYEGV 121 G+ LY + + Q+ ++ + + + + ++ +GI I+ + + + + + Sbjct: 65 IGEHLYIQAVDILQKADNLEQTVLDYQQLKGGKLRLGISPLGSEILSEAIFNFYQMHPSI 124 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 +E + D L QLD + + + + +I P + + +R + Sbjct: 125 DISLIEDGAESLKDALLQGQLDVATLMKPID---DDFDYFSICSYPVMVVAN--KKRMGK 179 Query: 182 RQEQELLQEL---PWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 ++ + L+ L P + F + ++F MI N + G P II + + I V++ Sbjct: 180 QKTKVTLKSLSNAPLI--LFTSNSSFTPMIIQNCQALGFEPNIICQTNQWHLLIDMVKQD 237 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHR 280 +T++P + + ++ L +P E + + R HR Sbjct: 238 MGVTLLPQYYTQKLDLTELVCLPLT-QPQLKWELVMAWRRHR 278 >UniRef50_A1B7J2 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=A1B7J2_PARDP Length = 386 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 61/269 (22%), Positives = 126/269 (46%), Gaps = 18/269 (6%) Query: 2 DIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLN 61 +I S++++ + + +T + ARAA ++ +T S + I ALE ++G +LF R++ +L Sbjct: 89 NITRSRQLKTLLAIVETGSFARAANRVALTPSAVSQQIQALENEVGVSLFNRENRPPTLT 148 Query: 62 KAGQELYQKLFPVYQRLSAIDNEIHN-SGRR-SREIVIGIDNTYPTIIFDQLIS-LGDKY 118 AGQ++ + + + A +N I SGRR + VIG T + Q +S + + Sbjct: 149 AAGQQMVEA---AAELVRAAENAIDAISGRRIVGKFVIGSVRTSAIGLLPQAVSRVVANH 205 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLD-FIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 G+ + + + ++ +++ +LD II+ +S+R + L FL++ Sbjct: 206 PGLKIRLLVGNSENLVQDVYAGRLDAAIIAENSLSSRDLDWSPFIREPL------FLIAP 259 Query: 178 RYEERQE-QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + ++ L P+ +RF++ +I+ + + I + A + VE Sbjct: 260 PGTPVVDVRQALSAFPF--VRFRSNVPLARLIETELGRMNLPLNDIAEMDTISAVTACVE 317 Query: 237 RGHFLTVIPHFAW--RLVNPATLKYFDAP 263 G ++++P A R V+ L + D P Sbjct: 318 NGLGVSIVPRIAAIERGVDLVMLPFGDPP 346 >UniRef50_D0J1D7 Transcriptional regulator, LysR family n=12 Tax=Bacteria RepID=D0J1D7_COMTE Length = 306 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 55/247 (22%), Positives = 102/247 (41%), Gaps = 14/247 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 ++++ F+ +A+ ++ RAAE++H++ SP + IA LE+++G LF R I L + G+ Sbjct: 5 RQLQYFVAVAEEEHVGRAAERLHISQSPLSRQIAQLEDKLGLVLFERSQQRIRLTRDGRT 64 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-----SREIVIGIDN--TYPTIIFDQLISLGDKYE 119 + + L N + + GRR + IG + ++ + L LG Sbjct: 65 FLAE----TRALLTHANRLESLGRRLGRGDEGGLCIGYLEYAMHSGVLPNALRELGQGRP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V + ++ L R LD + + +LE + P+ L Sbjct: 121 AVHIALYNQQSDAQLEGLRQRSLDIALVCEPPQPDDPDLEAAQVLN-DPMLLAVPKGHPL 179 Query: 180 EERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 E+Q+ E L + W+ ++ + A + A G PTI +A + V Sbjct: 180 AEKQDIEPADLAQQRWIGVKHKESALRHDTLIAACAKAGFTPTISMEATEPLAALGLVAA 239 Query: 238 GHFLTVI 244 G +T I Sbjct: 240 GLGVTTI 246 >UniRef50_A1ZQK8 LysR substrate binding domain, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQK8_9SPHI Length = 280 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 15/149 (10%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 ++ +++LA T+N RAAEK+++ S F I LEEQ+ LF R N+ L G++L Sbjct: 6 IKYYLVLADTHNFTRAAEKMNVVQSTFSAGIKKLEEQLDCKLFYRDKRNVRLTPEGEKLK 65 Query: 69 ---QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG----V 121 ++L + ++ E+ + S+ + +G+ I+ D ++ +KY+ Sbjct: 66 DMAKELMACWNKI-----ELTYNHHESKNLSVGL---LKNILMDAILPKFNKYKNQYPEY 117 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQH 150 + ++ S + L +LD +I+ +H Sbjct: 118 AIKIIDGSAEELKKQLIQEELDCVIAKEH 146 >UniRef50_C8YX91 DddZ n=1 Tax=Halomonas sp. HTNK1 RepID=C8YX91_9GAMM Length = 301 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 16/224 (7%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K +R F+ +A +++RAAE +H+T + L+E +G TLF R ++L GQ Sbjct: 5 KALRAFVAVAHEGSVSRAAEALHLTQPAVSLKLKQLQETLGLTLFKRHAQGLALTTDGQN 64 Query: 67 LYQKLFPVYQRLSAID---NEIHNSGRRSREIVIGIDNTYPTI--IFDQLISLGDKYEGV 121 L + L A D +H++ R I +D + + + QL+ + V Sbjct: 65 LLKPAETALAALKAFDIRAQSMHDTLRGRLRIGTIVDPEFIRLGALLHQLVQ---RIPQV 121 Query: 122 TAQPVEFSENGVIDNLFDRQLD---FIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + V+D+L R+LD ++ SP V+ + + EL + Sbjct: 122 ETDLHHGTSGLVLDSLLHRELDVGFYLESPGQQPETVEGAPEVEMIELTYFAYNIIAPEG 181 Query: 179 YEE---RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINP 219 + R + L LPW+ R+ ++ + P G+ P Sbjct: 182 WSSSLVRTDWPSLAALPWIVT--PRRSVHYRLLAKQLLPLGLTP 223 >UniRef50_A6VZS6 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=A6VZS6_MARMS Length = 301 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 6/110 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F +A+ N+ RAAEK+ + P + I LEE +G LF R ++L AG+ Sbjct: 5 RHLRYFCAVAEEKNLTRAAEKLFIAQPPLTRQIKQLEEDVGAQLFDRHSRGLTLTPAGKY 64 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSRE--IVIGIDNTYPTIIFDQLISL 114 +++ Q L+ D I N+ R + E V I P++ + QL SL Sbjct: 65 FWEQ---AKQMLAKADMVIENTRRIAEEQKAVFSI-GFVPSVFYGQLPSL 110 >UniRef50_A1WPC1 Transcriptional regulator n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WPC1_VEREI Length = 292 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 48/81 (59%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +K+ F+ +AQT N+ +AA +H++ SP + I ALEE++G LF+R+ + L AG++ Sbjct: 5 QKLHYFVTVAQTLNVGKAATLLHISQSPLSRQIIALEERLGTALFSRERKRLQLTDAGRQ 64 Query: 67 LYQKLFPVYQRLSAIDNEIHN 87 + + + +++ I + Sbjct: 65 FLDEAKALIEHAQQLEDRIRD 85 >UniRef50_UPI00017889E9 transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017889E9 Length = 294 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 12/114 (10%) Query: 10 RNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQ 69 R F+ A+T+N+ +AA+ +HMT +I LEE +G LF R + L + GQ LYQ Sbjct: 9 RVFLHAAETSNLTKAAQNLHMTQPSVSYAIKQLEEALGVGLFDRLSKGVRLTQEGQALYQ 68 Query: 70 KLFPVYQRLSAIDNEIH-----NSGRRSREIVIGIDNTYPTIIFDQLISLGDKY 118 + + L + + + GR + IG + I+ D L+SL D++ Sbjct: 69 HVRQAFDELDSAERRLKKLKQFGEGR----LRIGANG---AIVKDFLLSLLDRF 115 >UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7X5_ACIC5 Length = 305 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 9/249 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +AQ N RAA+++H++ S I LEE +G LF R ++L AG+E Sbjct: 6 RHIRAFLAVAQHANFTRAAQELHVSQSALTVQIQQLEEALGVKLFDRNKRRVALTDAGRE 65 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 + L + AI + +G R + + + + + I +S + G+ Sbjct: 66 VIAPLQRIVVDAEAIVSRTREITGLRRGVLSMAVLPSMASGILSTALSRFTAAHPGIMIH 125 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRL-GFLVSRRYEERQ 183 + + VI+ + ++DF V+ + + LT+ L RL FL + + Sbjct: 126 IHDVVADQVIEKVKKEEVDF-----GVATVMHADKELTLMPLFTDRLFAFLPEQHPLSSR 180 Query: 184 EQELLQELPWLQMRFQNRA-NFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 LQ++ + R + +M+D +R G+ T Y +S V G + Sbjct: 181 ASVSLQQISDYPLVLMARGTSVRSMVDQALRDHGLTATAAYEANYMSTALSLVRAGFGIG 240 Query: 243 VIPHFAWRL 251 ++P A + Sbjct: 241 ILPEDAGTM 249 >UniRef50_D1BQV4 Transcriptional regulator, LysR family n=3 Tax=Veillonella RepID=D1BQV4_VEIPT Length = 294 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 2/145 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K++ F+ + N+ +AA + +++ S + I ALE +G L R+ + L AGQ Sbjct: 4 KQLEYFVCVVDNNSFTQAATEQYVSQSAISQQIKALENSLGVELMVREKRSFHLTPAGQY 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTIIFDQ-LISLGDKYEGVTAQ 124 LY+ + +R I E G +R + IG N Y I Q +I + +Y+ + + Sbjct: 64 LYRSGKKLLERFHDIKVETTRIGTDARVSLRIGYLNRYSGIAMQQTVIRMAKRYKNLDIR 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQ 149 S + L DR++D + + Q Sbjct: 124 MYSGSHEELYGMLSDRRVDVVFNDQ 148 >UniRef50_C5CWH5 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CWH5_VARPS Length = 298 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 20/147 (13%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R+F+ +A+T + RA+E++H+T S K I + E+++G LF R + L+ AG Sbjct: 5 QLRSFLAVARTGQLVRASEQLHLTQSALSKQIKSFEDELGVLLFARTPAGMVLSSAG--- 61 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVE 127 ++L PV + EI R V G TII + I LG + A +E Sbjct: 62 -RRLLPVVVQTVDSAQEIVAIAASIRGAVSGALR-LGTIIDPESIRLGP----LLAALLE 115 Query: 128 FS-----------ENGVIDNLFDRQLD 143 FS GV+ L ++Q+D Sbjct: 116 FSPHVEVSLFHGISGGVLQLLKEKQVD 142 >UniRef50_UPI0001C36873 transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36873 Length = 295 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 4/106 (3%) Query: 15 LAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKLFPV 74 LA+ + AA+ +++T SIA+LE+++G +LF +K NI L K G+E YQ V Sbjct: 12 LAEVQHYTEAAKALYITQPSLSDSIASLEKELGVSLFQKKGRNIQLTKYGEEFYQY---V 68 Query: 75 YQRLSAIDNEIHNSGRRSREIVIGID-NTYPTIIFDQLISLGDKYE 119 + LS +++ I +S I ID PT++ D L D Y+ Sbjct: 69 SESLSILEHGISLIKEKSGHISGSIDIGCIPTLLGDFLPEALDLYQ 114 >UniRef50_B0CAU2 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CAU2_ACAM1 Length = 291 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 27/259 (10%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD++ ++R F+ +A+T +RAAE+++++ I LE+++G LF R L Sbjct: 1 MDLY---QVRYFLTIAETGTFSRAAERLYLSQPSLSAGIKKLEQELGVALFERGGRRTVL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYE 119 AGQ ++ + + A +E+ R + +G+ +T L+ S Y Sbjct: 58 TAAGQAFKERATVIMAQYQAALHELKGFNDRP-TLKVGVLSTLRVSELADLVHSFQQHYS 116 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 VT + + + + D L ++D I+ V + + T+ PL L Sbjct: 117 HVTLELYDHPADALQDKLTQGEIDVAIT---VLGPQDDAQTSTLLFAQPLLLAVPARHPL 173 Query: 180 EERQEQEL--LQELPWLQMRFQNRANFE------AMIDANMRPCGINPTIIYRPYSFMAK 231 +R L L P++ +R N E +++A I P ++YR Sbjct: 174 AQRTSVRLAELDGQPYI-----DRVNCEFFKQECQLLEAKK----ICPQVVYRASHEEWV 224 Query: 232 ISAVERGHFLTVIPHFAWR 250 IS V+ G L+V+P WR Sbjct: 225 ISLVKAGLGLSVMPF--WR 241 >UniRef50_A7GMD6 Transcriptional regulator, LysR family n=3 Tax=Bacillaceae RepID=A7GMD6_BACCN Length = 294 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 14/250 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R F +AQ I RAA+++HM P + + LE+++G L R + L Sbjct: 1 MDI---RQLRYFYTIAQEGQITRAAKRLHMAQPPLSQQLKLLEQELGVQLLERNGRKLEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG L++K + E+ G + + IG + + I D+L S + Y Sbjct: 58 TEAGHVLFKKTKEILTHFHETITEVKEVGSGLKGTLSIGSVKSAFSYIPDRLRSFHETYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 VT + E + + +R+++ I + E+E+ LP + ++ Sbjct: 118 LVTFRLQEGDSFRLAQLIKNREIELAIVRLPL-----EMEDFASLSLPADQFVAVMPNDK 172 Query: 180 EERQEQELLQELPWLQM----RFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + + ++EL L + R + +E +++ N + G+ P II +S V Sbjct: 173 ADNRSMISMKELAKLPLMLLQRIKGFGLYEKVLE-NFQKHGLKPNIICDCPDAAMLLSLV 231 Query: 236 ERGHFLTVIP 245 G T++P Sbjct: 232 RSGIGCTLLP 241 >UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=Actinomycetales RepID=C7PVI0_CATAD Length = 297 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R FI +A+T + RAAE +H+T + I ALE ++G LF R NI+L AG Sbjct: 5 QLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELGADLFLRARGNITLTDAG--- 61 Query: 68 YQKLFPVYQRLSA 80 + L P+ +R+ A Sbjct: 62 -EALLPMARRILA 73 >UniRef50_A6VSP2 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSP2_MARMS Length = 296 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 2/140 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +K+ FI +A+ + RAA ++H+ P + I A+E++IG LF R +SL AG+ Sbjct: 4 RKLNYFITVAEELHFGRAAARLHIAQPPLSQQIKAIEDEIGAVLFERSSQKVSLTPAGEA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 L + + Q I ++ + + S + +G T F + I+ GVT Sbjct: 64 LLPQARALLQDWEKIQEQVRSIANGTSGNLSLGFVWAAGTPHFSKGIAQFKQDNHGVTLN 123 Query: 125 PVEFSENGVIDNLFDRQLDF 144 E + +D L +++D Sbjct: 124 LEEMTTTHALDALRTKKIDL 143 >UniRef50_C8T509 Putative uncharacterized protein (Fragment) n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T509_KLEPR Length = 282 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 1/98 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K++R F + + ++++AA+ ++M P K I LEE++ +LF R+ N I +AG Sbjct: 8 KRLRYFCRVVEHGSVSQAAKSLNMAQPPLSKRIQELEEELQVSLFERRGNRIEPTEAGYF 67 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTY 103 LY+K + +++ E + +++R E+ IG+ + Y Sbjct: 68 LYRKGCEILRQVEDTARETADIAQKTRVEVRIGLTHLY 105 >UniRef50_Q7WNK0 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNK0_BORBR Length = 299 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/251 (21%), Positives = 107/251 (42%), Gaps = 23/251 (9%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +++F LA+ + RAA +++ PF SI LEEQ+G+ L R ++ L AG Sbjct: 8 RHLKHFAALAEELHFGRAARLCNISQPPFSVSIRQLEEQLGFALVERSSRDVRLTPAGTA 67 Query: 67 LYQKLFPVYQRL-SAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDK----YEGV 121 Y + ++ A D G + +G + ++++ L D+ Y V Sbjct: 68 FYSEACKALSQVRQAADVAARVHGGLDGVLCVGF---FASMLYRGLDRAVDRFRATYPTV 124 Query: 122 TAQPVEFSENGVIDNLFDRQL--DFIIS---PQHVSAR--VQELENLTISELPPLRLGFL 174 Q +E S + I L R + F+ S P ++A ++E L + E P Sbjct: 125 DLQLLELSTSDQIPALLRRHIHYGFVHSTRLPAEIAAGELLREPFLLCLPERHPA----- 179 Query: 175 VSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 R+ RQ+ + P++ ++ + A G +P I ++ ++ ++ Sbjct: 180 ---RHRRRQKLADFRAEPFVLFSRTFSPSYYDQVVARCLAAGFHPDIKHQVRHWLTVVAC 236 Query: 235 VERGHFLTVIP 245 V +G +T++P Sbjct: 237 VSKGMGITLVP 247 >UniRef50_A9FZI9 Transcriptional regulator, LysR family n=6 Tax=Bacteria RepID=A9FZI9_SORC5 Length = 362 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 38/63 (60%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R FI +A+ + RAAE++H++ SP + IA LEE+IG LF + L+ AG+ Sbjct: 51 RHLRYFIAVAEAEHFGRAAEQLHVSQSPLSRQIAQLEEEIGVELFVPSGRGVKLSAAGRS 110 Query: 67 LYQ 69 + Sbjct: 111 FLE 113 >UniRef50_B9JT77 Transcriptional regulator LysR family n=2 Tax=Agrobacterium vitis RepID=B9JT77_AGRVS Length = 306 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 22/175 (12%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 ++ F + A+ + AA+++H+T K + LEE +G LF R++ + L + G++L Sbjct: 10 LKAFSVAARYESFVLAAQELHVTHGAISKQVKNLEESLGEPLFLRRNRAVFLTERGRQLA 69 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQPVE 127 +L V+Q L + + ++ IV + PT+ LI +LGD E Sbjct: 70 ARLASVFQDLENVVTDFRSNAYAQPLIV----SCEPTLCLKFLIPNLGDLKERTGLDVKV 125 Query: 128 FSENGVID------NLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVS 176 + G ID +L R+ DF I P+ L + EL P +G + + Sbjct: 126 LAAGGKIDFRRDHVDLAVRRNDFAIDPR-----------LHVRELAPEAMGMVCT 169 >UniRef50_C9KL67 Transcriptional regulator, LysR family n=2 Tax=Veillonellaceae RepID=C9KL67_9FIRM Length = 302 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 60/266 (22%), Positives = 112/266 (42%), Gaps = 29/266 (10%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K MR+F + + NI+ AA+++ + + + LE +G LF R I L AG+ Sbjct: 4 KDMRSFYAIVEEGNISHAAQRLDIAQPALSRQMKRLESSLGVQLFERGSRRIRLTDAGRV 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 LY ++ + + EI G + I +G T ++ +LI+ +Y VT Q Sbjct: 64 LYSRVEHILGMVDGTVREITEIGSGVAGSIQLGTITTSGALLLPELITEFHRRYPQVTYQ 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR------- 177 E +++ L +R ++ I+ V ++V E +I LP L ++++ Sbjct: 124 IWEAEGARILELLDNRVIEIAITRTQVDSKVYE----SIV-LPNEPLVVVMNKDQIIGAS 178 Query: 178 ----RYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 R EE ++ ++ L W +++ AN R G P I+ S + + Sbjct: 179 DKEVRMEELRDTPIIIPLRW-----------QSLFVANCRKLGFEPHIVCVSDSIVQDLL 227 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKY 259 V+ ++P + L+ L Y Sbjct: 228 LVKMDMGAAILPVSSRTLLTDGNLYY 253 >UniRef50_Q1V682 Putative transcriptional regulator protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1V682_VIBAL Length = 304 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 5/154 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI ++++ FI LA+ N AAEK+H+T S + + L +Q+ L+ R+ I L Sbjct: 1 MDISY-RQLKAFIALAEEQNFTYAAEKVHITQSALSQMMKKLTQQLTSELYQRQGRKIIL 59 Query: 61 NKAGQELYQKLFPVYQRLSAI--DNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKY 118 +AG++LYQ+ + RL + N+ G +V + ++ L L +Y Sbjct: 60 TEAGEQLYQEARFIVNRLDKLVQQNKDRQHGYNKSLVVSSLYTLCASLAPKTLNDLKKRY 119 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFII--SPQH 150 T + +E + + ++ Q D I +P H Sbjct: 120 PDFTFRLIEERVDDITHSVLQGQADIGINTNPNH 153 >UniRef50_C6D158 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D158_PAESJ Length = 286 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 59/249 (23%), Positives = 115/249 (46%), Gaps = 26/249 (10%) Query: 10 RNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQ 69 R+FI + + ++++ AA+ MT + +AALE ++G LFTR +++ + G+ELY Sbjct: 8 RSFIAIYKHHSVSEAAKTRMMTQPAMSQHLAALEAEVGEALFTRVSRRLAVTERGKELYS 67 Query: 70 KLFPVYQRLSAIDNEIHNSGRRSREIV-IGIDNTYPTIIFDQLISLGDKYEGVTAQPVEF 128 ++ P+ + L + ++ + ++ IG+ Y F +L G+ + Sbjct: 68 RVAPLVESLEETTAGLKSTSLPNNKVFRIGLSLEY----FQELFLPKVTNSGMCSVSYFG 123 Query: 129 SENGVIDNLFDRQLDFIISPQH--VSARVQEL---ENLTIS-----ELPPLRLGFLVSRR 178 + + +++ L + Q++ II+P+ V EL E TI E+P LR + Sbjct: 124 TADQLLELLKEDQVELIITPKKFIVPGIEYELLMEETFTIITPASLEIPDLRHPKEIEEW 183 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 E++ ELP ++ ++ +I +P + P + A I AVE G Sbjct: 184 LSEQRWISYGLELPIIRRLWREHFKRRPLI----KPKHVIP-------NLHAVIRAVEMG 232 Query: 239 HFLTVIPHF 247 ++VIP + Sbjct: 233 AGISVIPTY 241 >UniRef50_A6FDC4 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FDC4_9GAMM Length = 293 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 90/167 (53%), Gaps = 15/167 (8%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 F + ++R+F+ +A+ + ++++E++ S + I LE+Q+ LF R N ++L Sbjct: 3 FDTSQLRSFVTVAELKSFSKSSERLCRVQSAISQQIQKLEKQVNAVLFIRNRNGVTLTAQ 62 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSRE---IVIGIDNTYPTIIF-DQLISLGDKYE 119 G ++L P ++ +I++E ++ ++ + +G +TY T D L+S ++Y Sbjct: 63 G----ERLLPYAVKMLSINDEAVSALCENQPKGWLRVGTSDTYATCFLKDILMSCSERYP 118 Query: 120 GVTAQP-VEFSENGVIDNLFDR-QLDFIIS---PQHVSARVQELENL 161 G+ + +SE+ I ++++ QLD +++ P ++++ +E L Sbjct: 119 GLQIEVHCGYSES--IWTMYEKGQLDIVLTQCCPSNINSETLHVEPL 163 >UniRef50_Q7W708 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W708_BORPA Length = 298 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ K+MR F+ +A+ + +RAAE++H++ P + I ALEE++ LF R ISL Sbjct: 1 MDL---KQMRYFVAVAEERSFSRAAERLHISQPPLSQQIKALEEELNAPLFHRLPRGISL 57 Query: 61 NKAGQELYQK 70 AG L + Sbjct: 58 TAAGAALLKS 67 >UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax=Proteobacteria RepID=A0AYH9_BURCH Length = 326 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 46/92 (50%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A+ N RAAE++H+ P + I LEE +G LF R + L AG+ Sbjct: 25 RHLRYFVAVAEERNFTRAAERLHIAQPPLSRQIQQLEEALGVPLFERTARPLKLTDAGRF 84 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIG 98 Y + + + +++ G+ R + +G Sbjct: 85 FYSHAVQLLAQTTELESMTKRVGKIERSMSVG 116 >UniRef50_A1TDP3 Transcriptional regulator, LysR family n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1TDP3_MYCVP Length = 302 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 8/127 (6%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F +L N RAAEK+ +T +I LE Q G LF R ++L G Sbjct: 4 RQLRYFAVLGHELNYRRAAEKLFITQPALSTAIKQLEHQFGVVLFHRNTREVALTDLGAA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN----SGRRSREIVIG-IDNTYPTIIFDQLISLGDKYEGV 121 + V Q LS +D + N SG R + +G + T ++F + Y V Sbjct: 64 WLPQ---VQQALSGVDAVVDNLIMLSGTRRGVLRVGYLIGTGADLLFRLVRHFEAAYPDV 120 Query: 122 TAQPVEF 128 T +P+EF Sbjct: 121 TVEPIEF 127 >UniRef50_A1JI47 HTH-type transcriptional regulator hdfR n=161 Tax=Enterobacteriaceae RepID=HDFR_YERE8 Length = 293 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 64/139 (46%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 ++ F+ +++T + RAAE +++T S I LE Q+G LFTR NNI L AG+ L Sbjct: 6 LKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGANLFTRHRNNIRLTPAGERLL 65 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVEF 128 + E+ +S + + + + + + L L + E + + Sbjct: 66 PYAETLMSTWQLAKKEVAHSLQHTELSIGATASLWEAYLTPWLQQLYKQRETLRLEARIA 125 Query: 129 SENGVIDNLFDRQLDFIIS 147 ++ L +RQLD +I+ Sbjct: 126 LRQSLVKQLHERQLDLLIT 144 >UniRef50_B7X4Z6 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=B7X4Z6_COMTE Length = 301 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 48/101 (47%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 +R F +A+T +IARAAE+ H+ +S + IA LE G L R ++L AG+ + Sbjct: 15 SLRLFSAVARTGSIARAAEQEHIASSALSRRIADLEHSFGTALLVRSPRGVTLTDAGRIV 74 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIF 108 +++ + L + E+ G R V N I F Sbjct: 75 FERGLQIDDELQGLIREVQEHGEEVRGTVRLYANMSAVIGF 115 >UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q0Q6_PROST Length = 295 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 57/261 (21%), Positives = 116/261 (44%), Gaps = 28/261 (10%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + +R F+ + Q N +RAAE++ +T +SI LE+++GYTL R+++ + L Sbjct: 1 MDI---RSLRYFVEVVQLNGFSRAAERLFVTQPAISRSIQKLEQELGYTLLVRENDGVRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEI-HNSGRRSREIVIGIDNTYPTIIF-DQLISLGDKY 118 G+ L + ++ ++++ + G S + +G+ + F D +++ +Y Sbjct: 58 TDEGEILLSHAKQILKQFNSMNKALKEKEGPLSGILNVGLPPVIASTYFADIIMAFSRRY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELEN--LTISELPPLRLGFLVS 176 V + +E + +++ + + +++ +A + +N + RL LVS Sbjct: 118 PQVELKILELGTHKMMEAMLNGEVE-------TAAVMLPFDNELFDLHVFSSDRLMLLVS 170 Query: 177 RRY-----EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGI---NPTIIYRPYSF 228 ++ + EL+ E P++ R N + M CGI P I R Sbjct: 171 EQHPLAMRNSVKFAELIDE-PFIFFSEDFRIN-----ELVMSACGIYGKKPVIAGRSSHL 224 Query: 229 MAKISAVERGHFLTVIPHFAW 249 + V G +T++P W Sbjct: 225 DLVTAMVRAGVGVTLLPDSMW 245 >UniRef50_D0LTU8 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTU8_HALO1 Length = 297 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 1/103 (0%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 F +A+ ++ +RAA K+ + S +SIA LEEQ+G L R + ++L+ AG LY+++ Sbjct: 14 FAAVAEESSFSRAAHKLGVGKSTVSRSIARLEEQLGAALIHRSTHKVALSTAGTALYERV 73 Query: 72 FPVYQRLS-AIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLIS 113 P L A+ ++ S E+ + + + + I+ L++ Sbjct: 74 APHLAALGQAVGKLPESAAEPSGELRMTVPHDFGAIVLPALLA 116 >UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=Enterobacteriaceae RepID=C5BEX8_EDWI9 Length = 312 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 4/148 (2%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + +R F+ + + ++ RAAEK+ +T K + LEE++G TL R+ + L Sbjct: 1 MDV---RTLRYFVEVVRQHSFTRAAEKLFVTQPTISKMLRNLEEELGCTLLIREGRGLRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLISLGDKYE 119 +G +YQ+ + + + E+ + G + + +GI T + + +Y Sbjct: 58 TDSGNVVYQRAQTILDQFGQLRTELDDLGALKKGSLKLGIPPMVGTQMAGLIGEFRQRYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIIS 147 G+ EF V + +LD ++ Sbjct: 118 GIELHIAEFGGLTVEQAVLSGELDLALT 145 >UniRef50_B9YAT6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAT6_9FIRM Length = 306 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 51/91 (56%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 + ++R F+ +AQT + RAAE ++ T I ALE ++G TLF R ++ L AG Sbjct: 11 TSQIRTFLTVAQTLSYIRAAELLYTTQPVVSYQIKALETELGVTLFNRTHRSVELTTAGS 70 Query: 66 ELYQKLFPVYQRLSAIDNEIHNSGRRSREIV 96 YQ++ P+ ++L I + + ++ +++ Sbjct: 71 YFYQQVEPLMRQLETIVQTMQSMNDQTPKLI 101 >UniRef50_D2NU85 Transcriptional regulator n=1 Tax=Rothia mucilaginosa DY-18 RepID=D2NU85_9MICC Length = 357 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 12/272 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M I+ ++M+ + + + + AAE + +T S + IA LE++ G L R + L Sbjct: 50 MSIYDIRRMQMLLEIQERGTVIAAAEALSLTPSAVSQQIATLEKETGTPLLQRIGRRVQL 109 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKY 118 AG + + + L + + N +G + + + I + + + +S L + Sbjct: 110 TSAGLIIVDSARSILRELDRMQTSVANLTGEPAGMVRLAIFQSAAFALLPETLSYLAEHA 169 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIIS---PQHVSARVQELENLTISELPPLRLGFLV 175 +T Q ++ R+ D ++S P H EL + ++E P L +V Sbjct: 170 PSLTLQVLQIDPETGTSLTRSREYDMVLSEAYPHHHIPEYPELHSELLTEDP---LSLIV 226 Query: 176 SRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 +E LPW+ QN + A+ R G P I Y + + V Sbjct: 227 PSTSTITSIEEA-HALPWVLEMEQNTSRSWAL--NQCRTAGFEPVIRYSANDMITNSNLV 283 Query: 236 ERGHFLTVIPHFAW-RLVNPATLKYFDAPHRP 266 + G +T++P F L L+ + P +P Sbjct: 284 KAGFAVTIVPGFILSSLSTTEGLRIVELPGKP 315 >UniRef50_A3VLI0 Transcriptional regulator, LysR family protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLI0_9RHOB Length = 350 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 63/296 (21%), Positives = 132/296 (44%), Gaps = 34/296 (11%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 ++++ F +A +++ RA+++I + + IA+LE+ +G LF R+ N++ L +AG++ Sbjct: 28 RRLQIFWAVANASSLTRASKQIGLAQPTVSQQIASLEDIVGMPLFERRSNSLELTEAGRQ 87 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREI--VIGIDNTYPTIIFDQLISLGDKYEGVTAQ 124 L + + V + + ++++ + G SR + G+++ ++ + +L K+ + Sbjct: 88 LMRHVQKVLESMQSLEDGLGAIGDGSRRTLRLAGLNSILRVLVPTAMEALHKKFSEIDYD 147 Query: 125 PVEFSENGVIDNLFDRQLDF-IISPQHVSARVQELENLTISELP-----PLRL---GFLV 175 E + VI+ L+ R+++ +IS ++ E + I P P L G Sbjct: 148 IHESAPAEVIEMLYARRINLGLISSNSIAPASAGFEQIHICTDPYVLAVPSDLDLSGVTD 207 Query: 176 SRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPY----SFMAK 231 R ++Q++L Q+ +A D G+ P RP+ SF Sbjct: 208 PSRDLSAKDQDVLFRSIQFAFGTQHSRRVQAWYD------GLMPG--NRPFAQARSFEVA 259 Query: 232 ISAVERGHFLTVIPHFAW----RLVNPATLKYFDAPHRPM-------YMQEYLYSI 276 I V G + + P + R+++ L D P R + Y+++ LYS Sbjct: 260 IGMVRAGLGICLAPAMSCVVGDRVIDGVRLYRVDFPARDVVALLPKQYLRQELYSC 315 >UniRef50_B7WRI3 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WRI3_COMTE Length = 307 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 7/102 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ K++RNF+ LA+ + RA+E++H+ P SI LE ++G LF R ++L Sbjct: 2 MDL---KRIRNFVTLAEAGSFRRASERLHLAQPPLSVSIQKLEAELGTRLFDRGPAGVTL 58 Query: 61 NKAGQELYQK----LFPVYQRLSAIDNEIHNSGRRSREIVIG 98 AG+ + ++ LF Q ++A + I G R +G Sbjct: 59 TVAGESVLREAKRLLFFERQVITAAHDAISGIGGTLRIGFVG 100 >UniRef50_C0VLJ0 Transcriptional regulator n=4 Tax=Acinetobacter RepID=C0VLJ0_9GAMM Length = 318 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 19/176 (10%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY--- 68 FI +A+T ++ +AA+++ ++ S + I EE++G LF R N + L AG+ LY Sbjct: 12 FIAVAKTGSLRKAADQLFISVSAIHRQIVLAEEELGVALFERLPNGLKLTLAGELLYADL 71 Query: 69 ---QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQP 125 QK F + Q+ NEI R S + + I + + D + S+ Y + Sbjct: 72 RSWQKDFQMTQKRL---NEIQGLQRGSIDFGV-ISALSESFVTDVIQSIHQDYPWINFNI 127 Query: 126 VEFSENGVIDNLFDRQLDF--IISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 + V D + + +LDF I++P+H L +S + LGF++ +++ Sbjct: 128 RVLDSDYVADLVINAELDFGLILNPKHQ-------HQLQVSSFIEMPLGFVIPKQH 176 >UniRef50_Q1IBR2 Putative transcriptional regulator, LysR family n=1 Tax=Pseudomonas entomophila L48 RepID=Q1IBR2_PSEE4 Length = 293 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 39/62 (62%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 ++ +R F+ +A+ + RAAE++HM P ++IA LE+++G+ LF R + L AG Sbjct: 4 TRLLRQFVAVAEELHFHRAAERLHMAQPPLSQAIARLEQRLGFILFQRHSRGVRLTPAGT 63 Query: 66 EL 67 +L Sbjct: 64 QL 65 >UniRef50_B5XZ27 Transcriptional regulator, LysR family n=6 Tax=Enterobacteriaceae RepID=B5XZ27_KLEP3 Length = 302 Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 43/68 (63%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F ++A+ NNI+RAA+++ ++ P + I LE Q+G TLF R + L AG+E Sbjct: 12 RLLRAFAVVAEENNISRAAQRLFISQPPLTRHIRHLEAQLGVTLFQRHSKGLILTDAGRE 71 Query: 67 LYQKLFPV 74 + + + P+ Sbjct: 72 VLEIIRPM 79 >UniRef50_UPI0001A435D5 LysR family transcriptional regulator n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A435D5 Length = 293 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 16/158 (10%) Query: 10 RNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQ 69 R F AQT + +AAE +H+T + I LEE +G LF R++ I LN AG+ L+ Sbjct: 37 RFFEAAAQTGSFVKAAESLHVTHGAVSRQIRLLEEALGVELFERRNRAIFLNAAGRSLHT 96 Query: 70 KLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLI----SLGDKYEGV---- 121 V+++L + ++ + +++ V+ + + PTI LI + + + Sbjct: 97 VTQSVFEQL---EGAVYRLQQSAQDDVLTL-SCEPTIAMKWLIPRLPAFNQAHPDIKLHL 152 Query: 122 --TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQE 157 P++F +GV +L R+ DF PQ + +V + Sbjct: 153 VAAGGPIDFVRSGV--DLALRRDDFHWDPQTHAVKVCD 188 >UniRef50_C3RQY6 Transcription regulator n=2 Tax=Bacteria RepID=C3RQY6_9MOLU Length = 295 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 8/148 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K+M+ FI + + N+ AAE+ +++ S + I ALE+++G L R + +L AG+ Sbjct: 3 KQMKYFISVVECNSFTEAAEQCYISQSAISQQIKALEQELGVDLIKRNNRQFTLTPAGEY 62 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSRE----IVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 Y+ + +S IDN + RR ++ + IG Y I+ Y V Sbjct: 63 FYRHGVEL---VSEIDNLKRETVRRGQDQELSLKIGYLRCYGAQELHHAIAKFSKTYSEV 119 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQ 149 + V + + D L Q+D +IS Q Sbjct: 120 SLSIVNGTHEELYDLLRSGQVDLVISDQ 147 >UniRef50_A0RQT9 Transcriptional regulator, LysR family n=2 Tax=Campylobacter fetus RepID=A0RQT9_CAMFF Length = 293 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 112/264 (42%), Gaps = 40/264 (15%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K++ +F+ L + NN++ AA++ ++ S S+ LE + LF R N+ +N+ G+ Sbjct: 4 KQIEHFLKLYELNNVSLAAKEFDISQSALSNSLKELENSLNGNLFDRIGKNLIINQKGKA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIV----IGIDNTYPTIIFDQLISLGDKYEGVT 122 Y+++ PVY L I+ ++ +G + ++ IG + PT++ D L G Sbjct: 64 FYEQILPVYLNLKNIEIKMRYNGLLNLNLLSSQNIG-NYLLPTVLNDLL--------GKF 114 Query: 123 AQPVEFSENG-VIDNLFDRQLD--FIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 + ++DN+ + + D FI S H N IS+L +V Sbjct: 115 NMTLSIKNTAKIVDNILNHKCDLGFIESNIH---------NKNISKLKICEDELIVVCAD 165 Query: 180 EERQEQEL----LQELPWL--QMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 + Q +E + + W+ + R F I P G+N I S + Sbjct: 166 KNYQNKECYIDEISDKKWILREDGSGTRQTFLTKI-----PNGVNINIALELNSTESIKK 220 Query: 234 AVERGHFLTVIPHFAWRLVNPATL 257 +E+ F +V+P F P TL Sbjct: 221 CLEKSEFFSVLPRFCI----PKTL 240 >UniRef50_D1SY05 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SY05_9BURK Length = 318 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 15/242 (6%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +++F+L+ +T ++A AA ++++TA+ + + +LE + L R ++ AG L Sbjct: 6 LQSFMLVVETGSMAEAARRLNLTAAAVAQQMHSLEREFQVPLLARAGRTVAPTPAGHRLA 65 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNT-YPTIIFDQLISLGDKYEGVTAQPVE 127 + + + L ++++G S E+ IG NT +++ D L + V Sbjct: 66 RSAPLLLRELGQARAHVNDAG-ASGELAIGTINTALHSLLPDILADFSQRLPHVRV---- 120 Query: 128 FSENGVIDNLFDR----QLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 F ++G L+ LD + A + + E P L L R ++ Sbjct: 121 FLQSGTTQQLYQSVQQGGLDAAVCLHPSFALAKTFGWALLREEP---LVLLAPRHLAQQN 177 Query: 184 EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTV 243 ELL+ P + R+ M++ +R GI P + S +A V+RG + V Sbjct: 178 AHELLRTQPLI--RYDRSLGGGQMVERYLREAGIVPQERFELSSLVAIAMMVDRGLGVAV 235 Query: 244 IP 245 +P Sbjct: 236 VP 237 >UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Geobacillus RepID=A4ISN4_GEOTN Length = 305 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 3/79 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K+++ F+ +A+ I +AA+K+H+ P + + LEE++G LF RK + L G+ Sbjct: 5 KQLKYFVTIAEEGQITKAAQKLHIAQPPLSQQLKQLEEKLGVPLFDRKAKKMELTAPGKL 64 Query: 67 LYQKLFPVYQRLSAIDNEI 85 Y+K Q L +D+ I Sbjct: 65 FYEK---AKQLLHQLDDAI 80 >UniRef50_C1XGE6 Transcriptional regulator, COG0583 n=2 Tax=Meiothermus RepID=C1XGE6_MEIRU Length = 297 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 26/187 (13%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +AQ ++ RAA + MT + + ALE QIG LF R+ + L K GQ+ Sbjct: 11 QALRVFLCVAQEGSVGRAALSLGMTQPGVSQHLQALEAQIGQVLFHRQGRRLVLTKTGQD 70 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTIIFDQLIS------------ 113 L + Q L R R + IG T + + ++ Sbjct: 71 LLPEARRAVQALEGFMQAAQALERLERGRVEIGASTTMAVYVLPRYLTEFKRLYPEIRIK 130 Query: 114 -LGDKYEGVTAQ----PVEFSENGVIDNL--FDRQLDF------IISPQHVSARVQELEN 160 EG+T + +E + +++L F+RQL + I+ P+H AR +E+ Sbjct: 131 LESGSSEGLTQRLLQGELELAVVEAVEHLEGFERQLFYEDELVVIVPPEHPWARKEEIAP 190 Query: 161 LTISELP 167 ++E+P Sbjct: 191 EQLAEVP 197 >UniRef50_D2MMC0 Transcriptional regulator, LysR family n=1 Tax=Bulleidia extructa W1219 RepID=D2MMC0_9FIRM Length = 282 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 48/83 (57%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K++ F + ++ I+ AA K+ ++ P + LE+++G +LF R I L +AGQ Sbjct: 4 KQLEYFRAVVESGTISAAARKLSLSQPPLSFQMKKLEDELGLSLFERGRKEIHLTEAGQL 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSG 89 LYQ+ + +RL A+ E+ ++G Sbjct: 64 LYQESGDLLRRLEALKLEVRSAG 86 >UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=Actinomycetales RepID=A0QTM3_MYCS2 Length = 304 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 4/118 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F + + + RAAE++HM P + I LE ++G TL TR ++ L AG Sbjct: 4 RHLRYFRAVGEELHFGRAAERLHMAQPPLSQQIRQLERELGCTLLTRTTRSVELTPAGHT 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN--SGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 ++ + + A + E SG + R I IG + + QL+ +LG+ G+ Sbjct: 64 YLRRAVEILDAVDAANTEAQRIASGIQGR-IAIGCVGSATYSLLPQLVRALGESLPGI 120 >UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGS2_AZOVD Length = 301 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 2/118 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F+ LA+ + +AAE +H+T P + I+ALE +G LF+R ++ L AG++ Sbjct: 5 RQLRYFMALAEHLHFGKAAESLHITQPPLSRQISALEADLGVVLFSRHSRSVELTAAGRD 64 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTIIFDQLI-SLGDKYEGVT 122 Q L S R R E+ + I+ +L+ + D Y V+ Sbjct: 65 FQQHAKTALAELDLAIRSTRASARGERGELRVSFTMVAAWILLPELLKAYSDAYPDVS 122 >UniRef50_UPI000197C658 DNA-binding transcriptional activator AllS n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C658 Length = 308 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 5/143 (3%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 M FI +AQ + ++AA++++ + + I LEE +G LFTR ++L AG+ L Sbjct: 7 MTTFITVAQCQSFSQAAKQLYKSTATISYRIKILEEYVGVQLFTRTTRTVNLTSAGEYLL 66 Query: 69 QKLFPVYQRLSAIDNEIH--NSGRRSREIVIGIDNTY--PTIIFDQLISLGDKYEGVTAQ 124 + + LS + N++ N G +EI I I+N P + D L L +++ Sbjct: 67 EHCREWHNWLSNMPNQLRLINEGVE-QEITIAINNLLYEPNAVADLLQHLTERFPFTRLN 125 Query: 125 PVEFSENGVIDNLFDRQLDFIIS 147 GV D L + D I Sbjct: 126 ITRQVYMGVWDALLSNKCDIAIG 148 >UniRef50_Q0JZC7 Transcriptional regulator, LysR-family n=4 Tax=Burkholderiales RepID=Q0JZC7_RALEH Length = 325 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 7/169 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + MR FI + ++ RAAE + + + +AALE+++G L R + Sbjct: 1 MDL---RAMRYFIAIVDQGSLTRAAEVVCVAQPALSQQLAALEKELGVPLVHRGAKGVKP 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIV-IGIDNTYPTIIFDQLI-SLGDKY 118 +AG+ LY+ + +++ E +G +V IG+ T LI ++ +Y Sbjct: 58 TEAGRTLYRHARNILRQVEIAGAEARVAGTDVTGMVAIGLPTTAAAAFGMPLIRAVRARY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDR-QLDFIISPQHVSARVQELENLTISEL 166 + Q E S +G I L D +LDF I + V +R ELE L L Sbjct: 118 PQIRLQLFE-SMSGYISELLDHNRLDFAILFRDVPSRAVELERLASESL 165 >UniRef50_B0G212 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=B0G212_9FIRM Length = 316 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 54/101 (53%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++ F + ++I +AA ++++T +I LE++ LF R N+++L K G+ Sbjct: 32 QLEYFCATCRHHSITQAARELYVTQPAISSAIRELEKEFSINLFVRSKNHVTLTKEGELF 91 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIF 108 YQK + + + +E+H+ GR++ + IGI T+ F Sbjct: 92 YQKAQDMLRYIKESSSELHDLGRQTPPVRIGIPPLLSTVYF 132 >UniRef50_Q07WR2 Transcriptional regulator, LysR family protein n=4 Tax=Alteromonadales RepID=Q07WR2_SHEFN Length = 296 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 2/116 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F + A+ + A+++++T S I LEE + +LF R+ ++L + G Sbjct: 9 RGLRCFCVAAECLSFKETAKRLYLTPSAVSHQIKQLEESLNQSLFIRQTRAVTLTEVGAR 68 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIF-DQLISLGDKYEGV 121 YQ + PV Q+L +E N R E+ I + + + +F +LI KY + Sbjct: 69 FYQAIEPVMQQLVNTVSEF-NQSDRMLEVSISMPEFFASELFMPKLIGWSSKYPNI 123 >UniRef50_C4V240 Possible transcriptional regulator n=2 Tax=Selenomonas RepID=C4V240_9FIRM Length = 297 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 29/205 (14%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 +MR F + Q NI +AAE +H++ ++ ALE + G LF R+ I++ G +L Sbjct: 5 QMRYFYEVCQWQNITKAAEHLHVSQPTVTVAMQALEAETGLNLFHREGRKITVTADGAKL 64 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTI----IFDQLISLGDKYE---- 119 K+ + ++ +D+EI + R ++ I + + IF + + + E Sbjct: 65 LSKVSYILTEVARLDDEIRDMAHRHAKVRIAMPLQLGVVFLPHIFGEFRAEHPEIELEII 124 Query: 120 ---GVTA-QPVE--------------FSENGVIDNLFDRQLDFIISPQHVSARVQELENL 161 GV+A Q VE FS LFD + F+ P H A + L Sbjct: 125 ETGGVSALQMVEEEKLDFALTNYTADFSARLSYAKLFDCECTFVTRPDHPFA---QRHTL 181 Query: 162 TISELPPLRLGFLVSRRYEERQEQE 186 +IS+L L L S+ + +R Q+ Sbjct: 182 SISDLKDEPLIMLDSKFFVDRLVQD 206 >UniRef50_C3JEG8 Transcriptional regulator, LysR family protein n=2 Tax=Rhodococcus erythropolis RepID=C3JEG8_RHOER Length = 291 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 46/85 (54%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + +++ + F++LA+T + A+ H++ + +A LE QIG TLF R+ + LN+ Sbjct: 1 MMLTEDLEWFVVLAETQQVTATADLTHLSQPTLSRKLARLERQIGVTLFDRQGRRLELNR 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHN 87 G+ LY+ + L A EI + Sbjct: 61 YGEILYRHARIALRALDAAQTEIQS 85 >UniRef50_C5CMH8 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=C5CMH8_VARPS Length = 329 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 2/153 (1%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 +K + +FI LA+T + +R+A+ H+T F + I ALE G L R L AGQ Sbjct: 3 TKWLEDFISLAETRSFSRSAQLRHVTQPAFSRRIQALEGWAGTDLVDRSSYPTRLTPAGQ 62 Query: 66 ELYQKLFPVYQRLSAIDNEIHNSGRRSREIV-IGIDNTYPTIIFDQLI-SLGDKYEGVTA 123 LY + + Q L + + ++++ I + +T F + SL + + + + Sbjct: 63 TLYSQAIEMLQSLQSTRAMLRGHSAAGQDVIEIAVPHTLAFTFFPSWVTSLREHFGPIKS 122 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQ 156 + + + + + L + D +I+ H S +Q Sbjct: 123 RLIALNVHDAVLRLVEGSCDLLIAYHHPSQPLQ 155 >UniRef50_C9PDK5 Transcriptional regulator LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PDK5_VIBFU Length = 293 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 7/88 (7%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + ++ F+ +A+T NI AA+K+H+T + I LE ++G LF R + LN+AG+ Sbjct: 4 RHLKYFLAVAETQNIRSAAQKVHVTQPAISRKIKELESELGVQLFDRLPKGLRLNRAGK- 62 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSRE 94 +YQK L A+ +I ++ R R+ Sbjct: 63 VYQK------ELGAVMRQIDDANERIRQ 84 >UniRef50_C4XRX4 LysR family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XRX4_DESMR Length = 299 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 34/220 (15%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R F+ +A+ ++ RAAE+++ + I LEE++G LF+R + L G+ L Sbjct: 6 LRTFVAVAEEEHLTRAAERLNASLPAVSAHIRGLEEELGVALFSRTPKGMRLTAEGRALL 65 Query: 69 QK-------LFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEG 120 ++ L V +R A+ ++ R +G++N + ++++ + ++ G Sbjct: 66 EEAREALRGLEAVRRRAGALRQDVTGVVR------LGLNNEAARLHVPEILAVMTRRHPG 119 Query: 121 VTAQPVEFSENGVIDNLFDRQLDF------IISPQHVSARVQELENLTISELPPLRLGFL 174 V V S ++DN+ +LD II H A V LE + ++ + P Sbjct: 120 VELHLVNSSSPRILDNVRLGRLDVGFIYDNIIEGGHEVA-VTPLEEVPMAVVGPT----- 173 Query: 175 VSRRYEERQEQ---ELLQELPWLQMRFQNRANFEAMIDAN 211 + ER Q + L LPW+ F R F+ +++++ Sbjct: 174 ---SWSERVRQADWDELAGLPWVW--FSERCPFQYLLESS 208 >UniRef50_A3VLR4 Putative LysR family transcriptional regulator n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLR4_9RHOB Length = 301 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 2/160 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + + F+ +AQ ++ RAAE++H+T + I LEE +G LF R +SL GQ Sbjct: 6 RHLSAFVTVAQARSLGRAAEQLHITQPALSRIIRNLEETVGAQLFERHPLGMSLTPHGQA 65 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIG-IDNTYPTIIFDQLISLGDKYEGVTAQ 124 L + + A E+ + SG + + IG + +I + + D + + + Sbjct: 66 LLPRAELLLADWGAALEELRSISGATTGTLRIGCVAGAVDPLIRHAMSQMLDAHPNIQLR 125 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTIS 164 + E+ +ID+L ++D ++ A +LE + ++ Sbjct: 126 VTDAIEDRLIDDLLAGRIDLAVAGAVSGASQFDLEQVYVT 165 >UniRef50_D1SIQ8 Transcriptional regulator, LysR family n=8 Tax=Actinomycetales RepID=D1SIQ8_9ACTO Length = 325 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + +R+F+++A+ + RAAE + M P +SI LE ++G TLF R + L Sbjct: 1 MDLL--RHLRHFVVVARELHFGRAAETLGMAQPPLSQSIQRLERELGVTLFDRSQRQVGL 58 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGI 99 AGQ L + L A + + + R R +G+ Sbjct: 59 TTAGQLLLGE----ADELLAGERRLRHLAERVRRGALGV 93 >UniRef50_A1K2Y9 Probable transcriptional regulator, LysR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K2Y9_AZOSB Length = 296 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/283 (22%), Positives = 119/283 (42%), Gaps = 42/283 (14%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 F +AQ+ + RAAE++ + S ++A LE Q+G L R ++L + G+ + ++ Sbjct: 12 FATVAQSGSFTRAAEQLDLPKSSVSHAVARLERQLGQRLIERSTRRLALTEQGERMLAQV 71 Query: 72 FPVYQRLSAIDNEIHNSGRRSR-----------------EIVIGIDNTYPTIIFDQLISL 114 P+++RL A+ E ++ + E+V + N +P + + + + Sbjct: 72 LPLFERLDAVAAEAGDARDEPQGVLRIATPYEFGAIQLGEVVNDVLNRHPRLQIEIDVRI 131 Query: 115 GDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPL--RLG 172 + A+P +G D +F + + + V RV + + P L RLG Sbjct: 132 ------LGAEPA----SGGYDVVFFATGEALPDSERVVRRVYSVAR-GLYAAPALVRRLG 180 Query: 173 FLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 R E L++ P L M + R +FEA A+ R + P R + ++ Sbjct: 181 L--PRSVAE------LEDWPCLSMPGEARWHFEA---ADGRTHSVQPRGPLRTTNAALRL 229 Query: 233 SAVERGHFLTVI-PHFAWRLVNPATLKYFDAPHRPMYMQEYLY 274 A GH T++ + R + TL A H P ++ Y + Sbjct: 230 QAAIAGHGATMLAASYCRRELEAGTLVPLLADHVPHPLKIYAH 272 >UniRef50_P20667 HTH-type transcriptional regulator catR n=15 Tax=Bacteria RepID=CATR_PSEPU Length = 289 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 13/144 (9%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F +LA+T N RAAE +H+ P + I+ LE+Q+G TL ++ + L +AG+ Sbjct: 4 RHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLG-TLLVVRERPLRLTEAGRF 62 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSRE-IVIG-----IDNTYPTIIF----DQLISLGD 116 Y++ V Q L I + G+ R+ + IG + P +I D + LG Sbjct: 63 FYEQSCTVLQ-LQNISDNTRRIGQGQRQWLGIGFAPSTLYKVLPELIRELRQDSELELGL 121 Query: 117 KYEGVTAQPVEFSENGVIDNLFDR 140 E T Q VE ++G ID F R Sbjct: 122 N-EMTTLQQVEALKSGRIDIAFGR 144 >UniRef50_B1KCH9 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=B1KCH9_BURCC Length = 299 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 2/161 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R+F+ +A+T + RAA ++ M P +SI LEEQ+G L R +SL AG Sbjct: 4 RHLRHFVAVAETQHFGRAAARLGMAQPPLSQSIMRLEEQLGIQLLERTPRGVSLTPAGAA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQP 125 L + P+ + + + + + + I I +L ++ GV + Sbjct: 64 LLAEAKPLIAQAELAERRVRQAADELASLSVAFVPMCALRIMPLAIQALRRQWPGVDVRL 123 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISEL 166 +E + ++ + +D + +A V LE++ I L Sbjct: 124 IERGSALTVASVKNGSIDLGVVVTS-AADVSGLESVVIERL 163 >UniRef50_C6R210 Transcriptional regulator, LysR family n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R210_9MICC Length = 308 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 12/272 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M I+ ++M+ + + + + AAE + +T S + IA LE++ G L R + L Sbjct: 1 MSIYDIRRMQMLLEIQERGTVIAAAEALSLTPSAVSQQIATLEKETGTPLLQRIGRRVQL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKY 118 AG + + + L + + N +G + + + I + + + +S L + Sbjct: 61 TSAGLIIVDSARSILRELDRMQTSVANLTGEPAGIVRLAIFQSAAFALLPETLSYLAEHA 120 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIIS---PQHVSARVQELENLTISELPPLRLGFLV 175 +T Q ++ R+ D ++S P H EL + ++E P L +V Sbjct: 121 PSLTLQVLQIDPETGTSLTRSREYDMVLSEAYPHHHIPEYPELHSELLTEDP---LSLIV 177 Query: 176 SRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 +E LPW+ QN + A+ R G P I Y + + V Sbjct: 178 PSTSTITSIEEA-HALPWVLEMEQNTSRSWAL--NQCRTAGFEPVIRYSANDMITNSNLV 234 Query: 236 ERGHFLTVIPHFAW-RLVNPATLKYFDAPHRP 266 + G +T++P F L L+ + P +P Sbjct: 235 KAGFAVTIVPGFILSSLSTTEGLRIVELPGKP 266 >UniRef50_A9CF77 Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CF77_AGRT5 Length = 323 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/95 (26%), Positives = 53/95 (55%), Gaps = 1/95 (1%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R F++ A+ + +RAAE++H++ + G+ + LE +G LF+R+ + L AG LY Sbjct: 29 LRAFVVAARHASFSRAAEELHVSTAAIGQQVRILETHLGQPLFSRQRGELVLTDAGSTLY 88 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTY 103 L ++ + +++ SG R R++ + + + Sbjct: 89 PGLADAFETMIGSLSDLMASGSR-RQVKVLAEGCF 122 >UniRef50_C0AC14 Transcriptional regulator, LysR family n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AC14_9BACT Length = 304 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 1/160 (0%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R F ++ + ++ RAAE++ ++ S + + ALE ++G L R ++ AG L Sbjct: 15 LRAFFVVVEMGSLNRAAERLRVSQSTLTRQVQALEGEVGGRLLERTSGGVAPTAAGHALI 74 Query: 69 QKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVE 127 + + PV +L + E+ R +S + +G ++ + L +L Y V + ++ Sbjct: 75 EGMRPVLAQLDGVWQEVRGLARGQSASLRVGYLSSAVDFLNPALAALRSGYPQVKVRLLD 134 Query: 128 FSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELP 167 + I L ++D + Q + +E + LP Sbjct: 135 LAPGAQIAALRKGEIDVALLGQAGAFLTKEFHTRRLVSLP 174 >UniRef50_Q2SMV2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMV2_HAHCH Length = 300 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 4/90 (4%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R F+ +A+ N A+A+ ++H++AS + I LE+++ LFTR ++L + GQ LY Sbjct: 8 LRVFLSVAKHLNFAQASAELHLSASSVSRQITELEKELNVALFTRSTRMVALTQQGQRLY 67 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSREIVIG 98 ++ P+ L +E+ + R+ +E V G Sbjct: 68 EEAAPLVISL----DEVSDCLRQQKEEVGG 93 >UniRef50_A9F0H5 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F0H5_SORC5 Length = 318 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 12/114 (10%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R FI +A+ N RAAEK+H++ SP + + L+E+IG LF + L AG+ Sbjct: 4 RHLRYFIAIAEEENFRRAAEKLHVSQSPLSRQMQQLQEEIGAELFAPSGRGVKLTPAGRL 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG 120 L R I +++ + + +RE G T TI F+ G Y G Sbjct: 64 L-------LDRAKTILSDVDAAAKEARETAEGQIGTV-TIGFES----GSAYVG 105 >UniRef50_C4DN91 Transcriptional regulator, COG0583 n=2 Tax=Actinomycetales RepID=C4DN91_9ACTO Length = 311 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 1/144 (0%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R F +A+T NI+RAAE++ + ++IA LE ++ LF R+ NISLN+ G Sbjct: 6 LRYFQTVARTENISRAAERLRIAQPSLSRTIARLESELKVPLFDRRGRNISLNRFGVAFL 65 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVEF 128 ++ L E+ S R T T+ D + +Y V + + Sbjct: 66 HRVDKALAELDDARRELTESAGLERGGFAIASETLLTVT-DTMSEFLTEYPDVEVRLYQA 124 Query: 129 SENGVIDNLFDRQLDFIISPQHVS 152 + + + L RQ+D ++ Q ++ Sbjct: 125 TGDEMRQLLQSRQVDMCLASQQLT 148 >UniRef50_A7JYF0 Transcriptional regulator n=63 Tax=Gammaproteobacteria RepID=A7JYF0_VIBSE Length = 337 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 40/63 (63%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R+F+L+AQ N +AAE++ ++ S + I LE+QIG TL R + L +AG+ LY Sbjct: 45 IRSFVLIAQLGNFTKAAEQLGVSRSHVSRQITNLEQQIGATLLQRTTRTLKLTEAGKVLY 104 Query: 69 QKL 71 ++ Sbjct: 105 KQC 107 >UniRef50_C4LCI2 Transcriptional regulator, LysR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LCI2_TOLAT Length = 308 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI ++++ FI +A+ N RAAE++H + P + I LEE++G LF R + L Sbjct: 1 MDI---RQLKYFIAVAEEQNFGRAAERLHRSQPPLTRQIQTLEEELGVLLFRRTAKGVEL 57 Query: 61 NKAGQEL 67 +AG+ L Sbjct: 58 TQAGETL 64 >UniRef50_UPI0001BC317C transcription regulator n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC317C Length = 292 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 18/138 (13%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 F+ + + N +AAE++++T S ++ +EE++G+ LF RK+N ISL + L Sbjct: 9 FVTIVEHMNFRKAAEELNLTPSAVSHCVSGMEEELGFPLFIRKNNKISLTGDAKS----L 64 Query: 72 FPVYQRLSAIDNEIHNS-----GRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQ- 124 P ++L +N ++ + G + +G N+ +L+ + DKY G+ + Sbjct: 65 LPYIKQLLLSENAVNQAIAEIQGFEKGTVKLGCFNSVCISWIPKLVKNFSDKYPGIKIEL 124 Query: 125 -------PVEFSENGVID 135 V++ ENG ID Sbjct: 125 FQGTYNDIVKWLENGTID 142 >UniRef50_C7LNY2 Transcriptional regulator, LysR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNY2_DESBD Length = 296 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/187 (22%), Positives = 82/187 (43%), Gaps = 31/187 (16%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R F+ +A+ N++ RAAE++ ++ I ALE ++G LF R + L++ G++L Sbjct: 6 LRTFVAVAEENHLTRAAERLFVSQPAVSSHIKALEGELGVVLFHRTPKGMILSREGEKLL 65 Query: 69 QKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISLG----DKYEGVTA 123 ++ + ++ N SG + +I +GI+ +F +L+ + Y G+T Sbjct: 66 GRVRRILDDAESLLGAARNMSGELNGQITLGINTDS---VFIRLVEISALMRTDYPGITM 122 Query: 124 QPV-----------------------EFSENGVIDNLFDRQLDFIISPQHVSARVQELEN 160 V E SE GV+ + R ++ P +AR++ Sbjct: 123 SLVNSNSWEIVRDVRRGVLDAGFAYGEISEEGVLATVLARVPFRVVGPAGWAARLESAGW 182 Query: 161 LTISELP 167 I+ +P Sbjct: 183 PEIAAMP 189 >UniRef50_D1UBT8 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UBT8_9DELT Length = 292 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 15/194 (7%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 +++ F+++A+ ++ RAAE++H + I ALE+++ LF R + L +AG L Sbjct: 5 QLKTFVVVAEEGHLTRAAERLHASQPTISAHIKALEDELETRLFIRTPKGMRLTEAGSRL 64 Query: 68 YQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTI-IFDQLISLGDKYEGVTAQP 125 K V + + E N G ++ IG++ + I L SL ++ +T Q Sbjct: 65 RDKAGEVLRAARELKLEARNMGGELVGDLSIGLNTDAEYLRIVPLLNSLATQHSKITLQI 124 Query: 126 VEFSENGVIDNLFDRQLD--FIIS-PQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 ++ + V + +LD FI P+H LE R V +++R Sbjct: 125 LQSASTAVQGQINQGKLDCGFIFGPPRHADILTVRLET--------TRFFVAVPDIWKDR 176 Query: 183 QEQEL--LQELPWL 194 + L L ELPW+ Sbjct: 177 IKGGLAALAELPWI 190 >UniRef50_C9YZ24 Putative LysR-family transcriptional regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YZ24_STRSW Length = 300 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 39/64 (60%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R+F LA+T N AAE +H+T +SIAALE ++G LF R +++L G E Sbjct: 4 RSLRHFSALAETLNFRVAAEHLHLTQPALTRSIAALERELGVQLFDRDKRHVALTADGAE 63 Query: 67 LYQK 70 L ++ Sbjct: 64 LLER 67 >UniRef50_D2R7I4 Transcriptional regulator, LysR family n=6 Tax=Planctomycetaceae RepID=D2R7I4_9PLAN Length = 288 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 64/139 (46%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R F+ +AQ N RAAE++ ++ +SI LEE++G +F RK ++ L AG L Sbjct: 5 QLRYFLKVAQRGNFTRAAEELMISQPALSRSIQKLEEELGQPVFERKTRSVLLTDAGTLL 64 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVE 127 + V L +EI + G+ R V I P + + L K+ E Sbjct: 65 QARSQQVLTILEDTKSEITDDGQCGRVRVGAIPTIAPYFLPEVLQRFSAKFPKANLIVQE 124 Query: 128 FSENGVIDNLFDRQLDFII 146 + + +I + ++D I Sbjct: 125 NTTDVLIKSCRQGEIDLAI 143 >UniRef50_Q141B1 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q141B1_BURXL Length = 301 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 26/182 (14%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAG------- 64 F+ +AQT + RAAE+I + S GK++ LE ++G LF R + L + G Sbjct: 15 FVAVAQTGSFTRAAEEIGSSKSNVGKAVQRLEARLGSQLFQRTTRAVRLTEDGETYLLAA 74 Query: 65 QELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQ 124 QE + L Q+L++ E +GR + I + + ++ I L +KY +T Sbjct: 75 QEALESLREAEQQLASRRAE--PAGR----VKIDLPAGFGRLLLPSFIQLREKYPKLT-- 126 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELEN---LTISELPPLRLGFLVSRRYEE 181 VE + L DR D + + R+ L + T+ +L LRLG S Y Sbjct: 127 -VEMA-------LTDRMSDPVGEGWDIVVRIGALPDDSEFTVRKLCDLRLGLYASPEYLA 178 Query: 182 RQ 183 R+ Sbjct: 179 RR 180 >UniRef50_Q9RYH7 Transcriptional regulator, HTH_1 family n=2 Tax=Bacteria RepID=Q9RYH7_DEIRA Length = 316 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/296 (23%), Positives = 123/296 (41%), Gaps = 23/296 (7%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A N+ RAA ++ + P + I LE +IG LF R + L +AG Sbjct: 20 RHLRYFLAVADERNVTRAAARLGIQQPPLSQQIRELEREIGTPLFHRVPRGVELTEAGHT 79 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLISL----GDKYEGV 121 + + + ++ +E +GR + E+ +G T I Q+ L D Y V Sbjct: 80 FLRLVQSIPAQVEGATHEARRAGRGETGELRVGF--TGAASINPQVQGLLRRYRDLYPDV 137 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIIS---PQHVSARVQELENLTISELPPLRLGFLVSRR 178 E + ++D L QLD +++ PQH L +LT++ + + +V R Sbjct: 138 RLTLTEKNTVTLLDELRSHQLDAVLARPLPQH-------LGDLTLTLVAREPMVAVVPRG 190 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMI-DANMRPC---GINPTIIYRPYSFMAKISA 234 + Q + L E + F +I D + C G P + ++ +S Sbjct: 191 HPAAQTRPLPLERLRDETFITTPREFGPLIYDTVWQACRAAGFEPRLGQLAPQMLSIVSL 250 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 V G ++++P A R +N +Y + P+ + R H AT+L A Sbjct: 251 VAAGLGVSLVPD-AMRRLNLEGCEYLEL-RPPVPTVDLTLLCRPHERAATVLNFTA 304 >UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=Cyanobacteria RepID=Q3M2K4_ANAVT Length = 298 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDN-NISLNKAGQ 65 + +R FI +A+ + ++AAE++H+ P + I LE ++G LF RK + L +AGQ Sbjct: 4 RHLRYFIAVAEELHFSKAAERLHIAQPPLSQQIQQLEAELGVELFQRKTKRQVQLTEAGQ 63 Query: 66 ELYQKLFPVYQRLSAIDNEIHNSGR 90 Q+ + ++ +LS + +GR Sbjct: 64 VFLQEAYQLFAQLSKAIDLTQRTGR 88 >UniRef50_A8PQG2 Transcriptional regulator, LysR family n=1 Tax=Rickettsiella grylli RepID=A8PQG2_9COXI Length = 314 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 73/140 (52%), Gaps = 3/140 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K++ F+ +A+T N++ AA++++++ S ++AALE Q+ +F R + LN+ G+ Sbjct: 29 KQLEVFVAIAKTGNVSHAAKEMYLSQSACSMALAALEGQLKGYIFDRHGKQLFLNERGRV 88 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR--SREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTA 123 L K + ++S + + + N+ ++ S ++ IG T + +LIS L Y+ + Sbjct: 89 LLPKASSIISQISELKDMMANNKKKALSGQLFIGASKTIGNYLLPKLISELTQSYKNIQI 148 Query: 124 QPVEFSENGVIDNLFDRQLD 143 + ++ LF +D Sbjct: 149 NLKIATTKAILSKLFAFNID 168 >UniRef50_A7H0A5 Transcriptional regulator, LysR family n=1 Tax=Campylobacter curvus 525.92 RepID=A7H0A5_CAMC5 Length = 301 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K+M+ I +A+ + +AA K+ ++ KSI +LE+Q+G TLF R + ISL AG+ Sbjct: 4 KQMQIVIKVAEEKSFTKAARKLKISQPTLSKSILSLEKQLGVTLFNRSQSPISLTDAGEM 63 Query: 67 LYQK---LFPVYQRLSAIDNEIHNSGRRSREIVIGI 99 Y+K + +Y L A N+ N R+ I IGI Sbjct: 64 YYKKTKSILEIYNDLMAQLNKYSNIKTRN-SINIGI 98 >UniRef50_C5EFB6 HTH-type transcriptional regulator gltC n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFB6_9FIRM Length = 300 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 22/92 (23%), Positives = 55/92 (59%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 +M+ F+ + + I+++AE +H++ +I LEEQ+G TLF R++ L++ G+ + Sbjct: 5 QMQYFVAVCEYGTISKSAEMLHISQPSISLAIKDLEEQLGVTLFDRENKRFQLSQEGKYM 64 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRSREIVIGI 99 Y+ + +++A++ ++ + G+ ++ I + Sbjct: 65 YEVTKDILTQINALEVQMKDLGKHRNQLCISV 96 >UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHL3_ACIBL Length = 306 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 2/139 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A+ + RAA ++H+ P + I LEE +GY LFTR + L AG+ Sbjct: 8 RHLRYFVAVAEELHFGRAAARLHLAQPPLSQQIKKLEEILGYALFTRTSRAVKLTSAGEV 67 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIV-IG-IDNTYPTIIFDQLISLGDKYEGVTAQ 124 ++ + + E+ + GR + +G I ++ T++ Y V Q Sbjct: 68 FLERAQRTLRHVREDMEEVRSIGRGEVGYLRVGFIGSSMLTVLPAIFGRYRRAYPKVNLQ 127 Query: 125 PVEFSENGVIDNLFDRQLD 143 E +GV++ L LD Sbjct: 128 LQESYTSGVVEGLLKATLD 146 >UniRef50_Q1N3G7 Transcriptional activator IlvY n=2 Tax=Gammaproteobacteria RepID=Q1N3G7_9GAMM Length = 297 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/139 (23%), Positives = 67/139 (48%), Gaps = 10/139 (7%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K + F++L++T + RAA++ H +AS + + LEEQ+G L R+ ++ L +AG+ Sbjct: 4 KDLNQFVVLSETLHYGRAAQQCHTSASTISRVVQRLEEQLGQQLINRERKDVKLTRAGES 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISLGDKYE------ 119 + ++ + +++H + E+ + T +L++L + Sbjct: 64 FKEYAIRTLEQYQQLRDQLHTRTSELEGELSLYCSVTATYSFLSELLALFRQRHPLVDIR 123 Query: 120 ---GVTAQPVEFSENGVID 135 G AQ V+ ++NG +D Sbjct: 124 LRTGDAAQAVDMAKNGEVD 142 >UniRef50_C8WLG5 Transcriptional regulator, LysR family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WLG5_EGGLE Length = 309 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 4/112 (3%) Query: 10 RNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY- 68 R FI+LA+ N AAEK+HMT K I ALE + LF R + L++AG+ L+ Sbjct: 7 REFIVLARCLNYTEAAEKLHMTQPALSKHIVALEREFDAELFIRDRRTVQLSEAGRILFG 66 Query: 69 --QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKY 118 ++ Y R A + R R I DNT +II + L D++ Sbjct: 67 CAMEMVDAYDRAQAAIATVVKE-RPIRVDGILYDNTVSSIISLSTVLLNDQH 117 >UniRef50_A8G944 Transcriptional regulator, LysR family n=8 Tax=Enterobacteriaceae RepID=A8G944_SERP5 Length = 302 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 44/76 (57%) Query: 5 ISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAG 64 + + + F+ AQ N + AA ++ +T + K+I LEE++ LF R +N+ L G Sbjct: 7 VHRLLPAFLAAAQAQNFSAAARQLGVTPAAISKNIRVLEEKLALRLFQRNTHNVVLTDEG 66 Query: 65 QELYQKLFPVYQRLSA 80 + L Q++ P++Q LSA Sbjct: 67 KALLQQVAPLWQALSA 82 >UniRef50_C7N4F3 Transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N4F3_SLAHD Length = 300 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 74/152 (48%), Gaps = 13/152 (8%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +RNF+ L+ ++ RAA+++H++ + ++ALE+ +G L+ R++ I L GQ LY Sbjct: 6 LRNFVALSDEKSMTRAAKRLHISQPTLSRQMSALEDDLGKQLYIREEGIIKLTVDGQILY 65 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSREIVIGI------DNTYPTIIFDQLISLGDKYEGVT 122 + + +++ + S E V G D+ +F + ++ +++ GVT Sbjct: 66 DYATSIVE----LEDRARTAIAHSDEHVTGTVYIGHGDSNSMQYLFQAMSNVRERHRGVT 121 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSAR 154 V + +++ L +DF+ Q AR Sbjct: 122 FNLVSGDTHSLVEKLNQGSIDFM---QECGAR 150 >UniRef50_A9HWY9 Transcriptional regulator, LysR-family n=5 Tax=Burkholderiales RepID=A9HWY9_BORPD Length = 321 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 F +A+ N+ AAE++H+T S + I LEEQ+G+ LF R+ + LN AG+ L + Sbjct: 16 FRAVAELQNLRAAAERLHLTHSAISQQIRGLEEQLGFELFDRRGRRVVLNSAGEALLRS- 74 Query: 72 FPVYQRLSAIDNEIHNSGRRSR 93 V L+ +D+ + + +R Sbjct: 75 --VQCALAQLDDGVQAAASVAR 94 >UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Bacillus RepID=A8FC52_BACP2 Length = 291 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 22/146 (15%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY--- 68 FI + Q +I +AAE +++T I +LE+++ LF R+ N +SL + G++ Y Sbjct: 9 FIYVCQLGSINKAAEALYLTQPSVSARIQSLEKELDLKLFDRQRNKLSLTEKGEQFYPHA 68 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSR---EIVIGI-----DNTYPTIIFDQLISLGDKYEG 120 +K+ YQ E +S +++ E+ IG +N P I L +L +KYE Sbjct: 69 KKILHSYQ-------EAKHSLKQTMIPYELTIGCASSISNNLLPNI----LPALKEKYEN 117 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFII 146 + + V V+ + + Q+DF I Sbjct: 118 LKVKIVTGHSKDVVQKVINNQVDFGI 143 >UniRef50_Q0KB06 Transcriptional regulator, LysR-family n=8 Tax=Proteobacteria RepID=Q0KB06_RALEH Length = 308 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 38/59 (64%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 +++ F+ +A+ ++ RAAE++H++ SP + IA LEE++G LF R I L + G+ Sbjct: 5 RQLHYFVAVAEDEHVGRAAERLHISQSPLSRQIAQLEEKLGLVLFERSQQRIRLTRDGR 63 >UniRef50_C5D044 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5D044_VARPS Length = 332 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 13/152 (8%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 F K++ F+ + + + AA K+H T S K +A LEE +G TL R + + L +A Sbjct: 3 FTFKQLEAFLFSTKLQSFSAAAVKLHTTQSAISKRLAELEESLGGTLLHRTSHGLELAQA 62 Query: 64 GQELY---QKLFPVYQRLS---AIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDK 117 G+EL ++ ++QR+ ++D + + R +G+ +LI L K Sbjct: 63 GRELLPLAEEAHRLWQRIQHDISVDKTLRGTFR------VGVTELIAMTWLTRLIQLLQK 116 Query: 118 -YEGVTAQPVEFSENGVIDNLFDRQLDFIISP 148 + VT +PV + + + L +LD I P Sbjct: 117 LHPQVTLEPVVDAGLTLFERLEANKLDLSIMP 148 >UniRef50_C4GLH6 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GLH6_9NEIS Length = 289 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 14/156 (8%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 +M F+ +AQ N +RAA K+ M S + IAALE+ +G LF R + L AG Sbjct: 6 EMALFVEVAQANGFSRAAAKLGMPQSTLSRRIAALEDALGLRLFNRSTRRLELTGAGAYY 65 Query: 68 YQKLFPVYQR---LSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQ 124 ++ P+ L +E+ + R + + + +D Y ++ L +Y + Sbjct: 66 LERALPIVAEARLLHGALDEMRETVRGALRVSLPVDMAY-NMVAPLLPEFAARYPDLR-- 122 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELEN 160 V+F ++ R++D I P ++ R +L + Sbjct: 123 -VDF-------DVTPRKVDLIGEPFDLAVRTGKLPD 150 >UniRef50_C1D646 Probable transcription regulator protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D646_LARHH Length = 305 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 17/157 (10%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD S +R F + +T + + AAE++ ++A+ K + ALE+Q+G LF R +SL Sbjct: 1 MDRLTS--LRVFQTIGETGSFSAAAERLGLSAAMASKHVHALEQQLGTRLFQRTTRRVSL 58 Query: 61 NKAGQELYQKLFPVYQRLSAIDN-------EIHNSGRRSREIVIGIDNTYPTIIFDQLIS 113 +AGQ+ +++ V +L D +I R S I G+ ++ L Sbjct: 59 TEAGQDYARRIALVLAQLEEADAAAMQQSVDIRGRVRLSAPISFGM-----RVLGGWLAG 113 Query: 114 LGDKYEGVTAQPVEFSENGV--IDNLFDRQLDFIISP 148 L +Y + + +E S+ V ID FD L +P Sbjct: 114 LAARYPQLEVE-LELSDRQVDLIDEGFDLALRITTTP 149 >UniRef50_D1THU2 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1THU2_9BURK Length = 305 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 1/106 (0%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ F+ +A+ AAE++HM+ P + I LE ++G TL TR L AG+ Sbjct: 8 RQLECFVSVAEEGTFRAAAERLHMSQPPLSRQIKQLESELGVTLLTRDSAGAELTTAGRA 67 Query: 67 LYQKLFP-VYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQL 111 + + Q AI+ +S R R++ +G + IF L Sbjct: 68 FLKGARKTLLQAAEAIETARRHSTGRPRQLRVGYSKVFDPEIFPSL 113 >UniRef50_D0XU83 Transcriptional regulator, LysR family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XU83_9CAUL Length = 303 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 40/67 (59%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 F+ +AQT + A AAE++ +T S GK++A LE ++G LF R + L G+ ++ Sbjct: 13 FVAVAQTGSYAGAAERMGLTRSGVGKAVARLEHRMGRRLFDRTSRALKLTDEGRAFVDEV 72 Query: 72 FPVYQRL 78 P+ +RL Sbjct: 73 VPLLERL 79 >UniRef50_P77744 HTH-type transcriptional regulator abgR n=48 Tax=Enterobacteriaceae RepID=ABGR_ECOLI Length = 302 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 2/141 (1%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R F+ +A+ +I A+ ++M+ KSI LEE + LF R+ ++L AG+ Sbjct: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Query: 68 YQKLFPVYQRLSAIDNEI-HNSGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQP 125 YQ + + L A +I G+ + +I IG+ + + +IS ++ V + Sbjct: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 Query: 126 VEFSENGVIDNLFDRQLDFII 146 +E +I+ L +LDF I Sbjct: 129 MEGQLVSMINELRQGELDFTI 149 >UniRef50_A4BKQ2 Transcriptional regulator, LysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BKQ2_9GAMM Length = 312 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 51/97 (52%) Query: 2 DIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLN 61 D+ + ++ + I+ + +N +A AA ++ ++ S K ++ALE Q+GY L L Sbjct: 11 DVAMLNQLESLIVFSHSNTMAEAASRLRVSQSALSKRLSALEHQLGYPLLQVHGRKAELT 70 Query: 62 KAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIG 98 + L ++L P+Y ++S + + I R S +I + Sbjct: 71 EQAIALLEQLEPLYAQMSDVLHSIQTPSRLSLDIAMA 107 >UniRef50_A4FAR0 Transcriptional regulator n=4 Tax=Actinomycetales RepID=A4FAR0_SACEN Length = 307 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 72/307 (23%), Positives = 130/307 (42%), Gaps = 26/307 (8%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +R F ++A+ +I+RAA ++ ++ ++IA LE ++G LF R+ ++ L Sbjct: 1 MDLL---PLRYFRVVARHEHISRAATELRVSQPSLSRTIARLETELGVPLFDRRGRHVRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG 120 N+ G L +++ L E+ ++ + V T T++ + L + + G Sbjct: 58 NRFGATLLRRVERALDELEQGRRELADAAGLAHGSVAVATETLLTLV-EPLTGFRNDHPG 116 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHV-SARVQELENLTISELPPLRLGFLVSRRY 179 V + + S +G+++ L ++D + Q V ++ E L L LG ++ R Sbjct: 117 VDVRLHQSSVDGLLERLRRGEVDLCLMSQPVDDPALESAEVLHEEVLLATPLGHRLATR- 175 Query: 180 EERQEQELLQELPWLQMR--FQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 ER L P++ R + R + D G PTI+ A + Sbjct: 176 -ERIGMGDLDGEPFITTRPGYWQR----VLTDRLFAAAGSRPTIVCEADEPGATAYLISS 230 Query: 238 GHFLTVIPHFAWRLVNPATLKY--FDAP--HRPM--------YMQEYLYSIRNHRYTATM 285 G + ++P A R A L + DAP HR + Y+ R H TAT+ Sbjct: 231 GLGVGLLPATARRFAPHAPLAWLHLDAPDCHRTLTFVWRRDAYVSLAAQEFRAH-VTATV 289 Query: 286 LQHIAED 292 + A D Sbjct: 290 RRAAAGD 296 >UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PT5_RALEJ Length = 300 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 58/286 (20%), Positives = 110/286 (38%), Gaps = 25/286 (8%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F+ +A++ AA K+H+T S I LE Q+G L R +L AG E Sbjct: 6 RQLRAFVEVARSGGFTAAAPKLHLTQSATSLQIRELESQLGLQLIDRSTRRFALTDAGSE 65 Query: 67 LY----QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVT 122 + + V Q ++ +H RR R V T++ + + D Y +T Sbjct: 66 FLISAMRIVGDVEQSVADTRELVHK--RRGRITVATTPLLASTLLPESIAHFLDAYPAIT 123 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLR--LGFLVSRRYE 180 + + + + +DF V E+ +P LR LG +V + Sbjct: 124 VRIADLPAEQIGRRVLSGDVDFGFG-------VFPEEDPQFDRIPLLRHPLGVMVPSSWP 176 Query: 181 ERQEQELLQELPWLQMRFQ------NRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + ++L W + Q + +ID + G+ + + Sbjct: 177 LATRK---RDLVWSDLEGQPLIAMSHATGMRTLIDQQLHQAGVQVNPRFEVAYLGTAVGL 233 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHR 280 E G +TV+P + +L+ ++ F H+P+ ++ +R R Sbjct: 234 AEAGLGVTVVPAYVGKLMGSDRVR-FRPLHKPVVHRQIELIVRAGR 278 >UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IJK2_METNO Length = 306 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F++LA+ + RAAE ++M P + I ALE+++ TLF R I L AG+ Sbjct: 4 RHLRYFVVLAEQRHFGRAAELLNMAQPPLSQQIKALEDELEVTLFDRSTRPIELTAAGRT 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNT 102 L ++ + +S +G+ + +VIG+ + Sbjct: 64 LLREARQILHHVSRAQAATRRAGQGQDGHLVIGVTGS 100 >UniRef50_B4W867 LysR substrate binding domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W867_9CAUL Length = 331 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 72/142 (50%), Gaps = 4/142 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A+T ++ +A+E++H+ +A LE ++G TL TR + + L G Sbjct: 4 RHLRYFVAMAETGSLMKASERLHVAQPALSVHLANLEAELGTTLVTRSNRGVELTPDGAF 63 Query: 67 LYQKLFPV--YQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLG-DKYEGVTA 123 LY++ + Y + S + + S R S + +G+ + P ++ +L D VT Sbjct: 64 LYERAINLLKYHQDSVVALK-DRSARPSGLVSVGLTSAMPALLAPELYRAARDTLPDVTL 122 Query: 124 QPVEFSENGVIDNLFDRQLDFI 145 V+ S + + + L + ++D + Sbjct: 123 YLVDASTSALYEWLQEGRIDMV 144 >UniRef50_B9YAK9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAK9_9FIRM Length = 297 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 F+ +A+ NI +AAE +H+T S K + LE Q+G +LF R ++L + G L K Sbjct: 10 FLAVAREQNITKAAETLHITQSTLSKQMMDLEFQLGKSLFIRGKRKLTLTEEGLFLRNKA 69 Query: 72 FPVYQRLSAIDNEIHNSGR-RSREIVIGIDNT 102 + + + + H+ GR S +I IG T Sbjct: 70 QDILELIDNTEAAFHSQGRYLSGDITIGCGET 101 >UniRef50_A6W215 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W215_MARMS Length = 297 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 1/90 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K ++ F+ LA+T N RA+++ H++ S ++I LEE++G LF R + ++L + GQ+ Sbjct: 4 KTLKQFLALAETLNFGRASDECHISISAMSRNIRHLEEELGVALFNRDNRTVALTQEGQK 63 Query: 67 LYQKLFPVYQRLSAIDNEI-HNSGRRSREI 95 + ++ + I +E+ NS + S EI Sbjct: 64 FLKYARDTSRQWNLIRHELTDNSDQLSGEI 93 >UniRef50_A6TUW4 Transcriptional regulator, LysR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUW4_ALKMQ Length = 309 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 12/150 (8%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K+++ F + A+ N++ RAAE ++ T +I ALE+ +G LF RK + L + G+ Sbjct: 4 KQLQYFQVCAEQNSLTRAAEILYTTQPNVSMAIRALEKDVGAKLFIRKSKGVELTECGRR 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPT----IIFDQLISLGDKYEGVT 122 +Y V + + N I +GR S ++ I T P+ ++F Q + G+ Sbjct: 64 IYDYAMNVLKNV----NLISETGRMSDQMTFSIA-TNPSSNMAVLFSQFYQKNNS-SGIH 117 Query: 123 AQPVEFSENGVIDNLFDR--QLDFIISPQH 150 + E +I+ L DR +L F+ ++ Sbjct: 118 FRYTECGAEQMIEMLHDRKYELGFVFVAEN 147 >UniRef50_A9I640 Transcriptional regulator, LysR-family n=4 Tax=Bordetella RepID=A9I640_BORPD Length = 304 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 9/158 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K + + I LAQT + RAAE H+T FG+ I ALE G L R+ + L G+ Sbjct: 5 KLLEDLIALAQTGSFVRAAELRHVTHPAFGRRIRALEAWAGTPLVQRQRAPVILTPQGEA 64 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIV-IGIDNTYP-TIIFDQLISLGDKYEGVT-- 122 L + V +R+ + + I +G ++ I + T++ D + L + V Sbjct: 65 LLKAATQVVERMEQVRHRIRGAGAAGEPVLRIATGRSLARTLVADWIARLRHRSPKVLTD 124 Query: 123 AQPVEFSENGVIDNLFDR----QLDFIISPQHVSARVQ 156 VE S G++ L R ++D + +H + VQ Sbjct: 125 GAQVELS-TGMMKELVARMEQGRIDLLCCYEHPALSVQ 161 >UniRef50_C6B6X6 Transcriptional regulator, LysR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B6X6_RHILS Length = 302 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F+ +A +I+RAA+K++++ ++I LE+ G LF R + L+ G Sbjct: 2 RELRQFVEVANQRSISRAAKKLNISQPALSRAIRQLEDSYGVPLFNRTGAGVELSVYGSA 61 Query: 67 LYQKLFPVYQRLSAIDNEI-HNSGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQ 124 LY + + L EI H GR I I + + +I +I + + GV Sbjct: 62 LYSRAVRILPALDEAKEEIEHLQGRAKAVIRIATGDLWGLVILPGIIKAFSRTHPGVVVH 121 Query: 125 PVEFSENG 132 VE +++G Sbjct: 122 -VEIADDG 128 >UniRef50_Q03CT2 Fhu operon transcription regulator n=4 Tax=Lactobacillus casei group RepID=Q03CT2_LACC3 Length = 292 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 2/142 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K++ F+ +A+ + AA+++HM P + ALE+++G LF R + L +GQ+ Sbjct: 4 KQITYFLAVAEAGQMTAAAKQLHMAQPPLSYQLKALEDELGVRLFERGSRGVRLTGSGQQ 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQ-LISLGDKYEGVTAQ 124 + + ++A +N SG + +G+ ++ ++ Q L + +Y V Sbjct: 64 FMTYAQQIVETVAAAENAARRSGEGEIGTLALGLTSSAGDVLPKQKLQAFNRRYPQVEFA 123 Query: 125 PVEFSENGVIDNLFDRQLDFII 146 E + G++D L LD I Sbjct: 124 LYEDNTYGILDKLRRNILDLAI 145 >UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter formigenes RepID=C3X7G6_OXAFO Length = 291 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R F +A+ I+RAA+++H+ P + LEE++G L R ++SL Sbjct: 1 MDI---RQLRYFCAIAEEGQISRAAQRLHIAQPPLSYQLKLLEEELGVKLIDRNTRSLSL 57 Query: 61 NKAGQELYQK 70 KAG YQ+ Sbjct: 58 TKAGLAFYQR 67 >UniRef50_A3QJ73 Transcriptional regulator, LysR family n=10 Tax=Gammaproteobacteria RepID=A3QJ73_SHELP Length = 290 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 54/106 (50%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R+F L + + R AE+++MT S + + LEEQ+ L R+ SL AG++LY Sbjct: 7 LRSFCTLVELGHFTRTAERLYMTQSGVSQHVRKLEEQLDTQLLLREGKKFSLTHAGRQLY 66 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISL 114 Q+ + Q L+ ++ I + E+ + + ++ +L+ L Sbjct: 67 QQGQAILQSLAQLEQGIKQDPPFAGEVRLMSPGSVGLKLYGELLEL 112 >UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNC1_BORBR Length = 297 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 F+ LA+ N RAA + H+ +P ++I ALE ++G TL R N+ L AG +L Sbjct: 9 FVTLAEELNFTRAAARCHIEQAPLSRAIKALERELGLTLLIRNTRNVELTPAG-----RL 63 Query: 72 FPVYQRLSAIDNEI-HNSGRRSREIVIG 98 F R++ + E+ RR++E IG Sbjct: 64 FCDCARVALEELELGARRARRAQEGAIG 91 >UniRef50_Q6FEW5 Putative transcriptional regulator n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FEW5_ACIAD Length = 309 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 90/181 (49%), Gaps = 13/181 (7%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M I S+ F+ +A+T N+ +AA+++H++ S + IA EE++ LF R N + L Sbjct: 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60 Query: 61 NKAGQELYQKLF---PVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDK 117 AG+ LY + Y++ +EI R + E+ + I + D L +L + Sbjct: 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGL-IAALSDGFVVDVLATLQSE 119 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLD--FIISPQHVSARVQELENLTISELPPLRLGFLV 175 + +T + + +I+ + ++D I+ P VSA +L+ ++ E+P +GF++ Sbjct: 120 FPWITLNILTDDSDVLINKIITNEIDVGLILDPV-VSA---QLDVMSFVEIP---IGFVM 172 Query: 176 S 176 Sbjct: 173 C 173 >UniRef50_A8SQI2 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SQI2_9FIRM Length = 298 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 27/261 (10%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + M F+ +A+ NI++AAE++H++ P + + LEE++G LFTR + + L Sbjct: 1 MDI---RDMNYFLQIAEYENISKAAEELHISQPPLSRQLRKLEEELGVELFTRDNGRLQL 57 Query: 61 NKAG---QELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLIS-LGD 116 +AG +E Q++ + + + E +N +I IG T + ++ + Sbjct: 58 TEAGHFFRERAQEVISLVDKTRSQMAERYNGA--GGKIRIGTIETLSAEKLPKWVAGFHE 115 Query: 117 KYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSA----RVQELENLTISELP---PL 169 Y VT Q V + +I + LD I + V++ RV+ E+ I+ +P PL Sbjct: 116 IYPDVTYQIVNNNSEEIIRMVDKGLLDMGIVREPVNSQYYERVRLQEDTWIAYIPNRNPL 175 Query: 170 RLGFLVSRRYEERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYS 227 S++ E EL L++ P + +R E I G P ++ S Sbjct: 176 ------SQKNRTTIEIELADLRDEPLI---LPSRGIHEKQIKTWFEMIGAEPKVVCWYSS 226 Query: 228 FMAKISAVERGHFLTVIPHFA 248 + +S V+ G + P A Sbjct: 227 LVNGVSLVKNGIGTMLCPKSA 247 >UniRef50_Q13T34 Transcriptional regulator, LysR family n=60 Tax=Proteobacteria RepID=Q13T34_BURXL Length = 334 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/277 (23%), Positives = 119/277 (42%), Gaps = 28/277 (10%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ + + + AAE++ +T K + +LE++IG L R + L AG+ Sbjct: 18 RALRYFVEVVRQQSFTVAAEQMFVTQPTISKMVKSLEDEIGSPLLLRDGRQMVLTDAGRI 77 Query: 67 LYQK---LFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTA 123 +YQ+ + + +L A N++ GR ++ IGI ++ + + +Y + Sbjct: 78 VYQRGQDVLAAHAQLQAELNDLDTLGR--GQLTIGIPPMGGSLFTPAIAAFRQRYPKIEL 135 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLR-LGFLVSRRYEER 182 + E + L + +L+ +Q ++ I LP R L +LV+R Sbjct: 136 KLFEQGSRAIEAALINGELEL-------GGVLQPVDPENIEVLPVTRQLLWLVARTGSNW 188 Query: 183 QEQELLQELPWLQMR---FQNRANFEAMIDANMRPC---GINPTIIYRP--YSFMAKISA 234 + L E+P Q+ F A+ D + C G PTI+ R + FMA + Sbjct: 189 DD---LHEVPLAQLANEPFVFYGESLALNDVVLNACRTAGFAPTIVGRSGHWDFMAAL-- 243 Query: 235 VERGHFLTVIPHFAWRLVNPA--TLKYFDAPHRPMYM 269 V G + ++P R ++PA T + P P M Sbjct: 244 VLAGVGIALLPAPYCRRLDPAKFTCRPVIEPEIPWEM 280 >UniRef50_C6CDU8 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech703 RepID=C6CDU8_DICDC Length = 295 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 46/104 (44%) Query: 12 FILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKL 71 F+ + +T NI +AAE+++ S I +LE+ + TL RK + SL G+ LY Sbjct: 9 FVTVVETGNITQAAERLNRAQSSISHRIKSLEDNLDVTLLDRKTDGCSLTAQGKILYDYA 68 Query: 72 FPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLG 115 + I +S I IGI P I LI LG Sbjct: 69 LKIVNLADDCKKNISHSKNSQLNIRIGIIECLPPYIVSSLIELG 112 >UniRef50_C9YBU0 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBU0_9BURK Length = 295 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 2/149 (1%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 +K + +F+ LA+T + +R+A+ H+T F + I +LE G L R L AG+ Sbjct: 3 TKWLEDFVSLAETRSFSRSAQLRHVTQPAFSRRIQSLEAWAGTDLVDRSSYPTRLTPAGE 62 Query: 66 ELYQKLFPVYQRLSAIDNEIHNSGRRSREIV-IGIDNTYPTIIFDQLIS-LGDKYEGVTA 123 LY + V Q L + + ++++V + +T F +S L +K+ + + Sbjct: 63 TLYDQSLEVLQALQSTRAMLRGHTTAAQDVVEFAVPHTLAFTFFPAWVSELREKFGPLKS 122 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVS 152 + + + + + L + D +I+ H S Sbjct: 123 RLIALNVHDAVMRLVEGSCDLLIAYHHPS 151 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P52044 Uncharacterized HTH-type transcriptional regulat... 395 e-108 UniRef50_C3BCJ4 Transcriptional regulator LysR n=1 Tax=Bacillus ... 222 2e-56 UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Ge... 218 2e-55 UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=C... 215 1e-54 UniRef50_Q9RYH7 Transcriptional regulator, HTH_1 family n=2 Tax=... 215 2e-54 UniRef50_C3AN59 Transcriptional regulator, LysR n=4 Tax=Bacilli ... 214 3e-54 UniRef50_A5WF28 Transcriptional regulator, LysR family n=1 Tax=P... 210 4e-53 UniRef50_B9IRL1 HTH_1, Bacterial regulatory helix-turn-helix pro... 210 4e-53 UniRef50_B2TMS2 Transcriptional regulator, LysR family n=3 Tax=C... 210 6e-53 UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=T... 209 7e-53 UniRef50_A6LVD0 Transcriptional regulator, LysR family n=5 Tax=C... 209 8e-53 UniRef50_A7GMD6 Transcriptional regulator, LysR family n=3 Tax=B... 209 1e-52 UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=P... 205 1e-51 UniRef50_A6EE41 Transcriptional regulator, LysR family protein n... 205 1e-51 UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=C... 205 1e-51 UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=... 205 1e-51 UniRef50_Q13T34 Transcriptional regulator, LysR family n=60 Tax=... 204 3e-51 UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=... 203 7e-51 UniRef50_C0Z7P7 Probable transcriptional regulator n=1 Tax=Brevi... 202 1e-50 UniRef50_A0KPM6 Transcriptional regulator, LysR family n=2 Tax=G... 202 1e-50 UniRef50_C3I9W8 HTH-type transcriptional regulator alsR n=1 Tax=... 202 1e-50 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 201 3e-50 UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Az... 200 4e-50 UniRef50_A8SQI2 Putative uncharacterized protein n=1 Tax=Coproco... 200 6e-50 UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=... 200 6e-50 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 199 1e-49 UniRef50_Q74DH4 Transcriptional regulator, LysR family n=1 Tax=G... 199 1e-49 UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putativ... 198 2e-49 UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter fo... 198 2e-49 UniRef50_Q13PS6 Transcriptional regulator, LysR family n=36 Tax=... 198 2e-49 UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax... 197 3e-49 UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=... 197 4e-49 UniRef50_C9PA71 Transcriptional regulators LysR family n=1 Tax=V... 197 5e-49 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 196 1e-48 UniRef50_Q632J2 Transcriptional regulator, LysR family n=5 Tax=B... 195 1e-48 UniRef50_A1K5Q5 Transcriptional regulator, LysR family n=4 Tax=B... 195 1e-48 UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Provide... 195 2e-48 UniRef50_A1S338 Transcriptional regulator, LysR family n=16 Tax=... 195 2e-48 UniRef50_D2P368 Transcription activator of glutamate synthase op... 195 2e-48 UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=C... 195 2e-48 UniRef50_UPI0001745DD5 transcriptional regulator, LysR family pr... 194 3e-48 UniRef50_C4DFU1 Transcriptional regulator, COG0583 n=1 Tax=Stack... 194 5e-48 UniRef50_C0CW79 Putative uncharacterized protein n=1 Tax=Clostri... 193 5e-48 UniRef50_Q3MEY8 Transcriptional regulator, LysR family n=1 Tax=A... 193 6e-48 UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=E... 193 6e-48 UniRef50_B4SNU6 Transcriptional regulator, LysR family n=1 Tax=S... 193 6e-48 UniRef50_C6CDY7 Transcriptional regulator, LysR family n=10 Tax=... 193 6e-48 UniRef50_C9KL67 Transcriptional regulator, LysR family n=2 Tax=V... 192 9e-48 UniRef50_C9XN81 LysR-family transcriptional regulator n=24 Tax=F... 192 1e-47 UniRef50_B8CTJ9 Regulatory protein, LysR:LysR, substrate-binding... 192 2e-47 UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Ta... 192 2e-47 UniRef50_C0BY92 Putative uncharacterized protein n=5 Tax=Firmicu... 191 2e-47 UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=M... 191 2e-47 UniRef50_Q1DBN8 Transcriptional regulator, LysR family n=2 Tax=C... 191 2e-47 UniRef50_P77559 Uncharacterized HTH-type transcriptional regulat... 191 3e-47 UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=M... 190 3e-47 UniRef50_Q13QG4 Transcriptional regulator, LysR family n=4 Tax=B... 190 4e-47 UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=H... 190 5e-47 UniRef50_Q3AEF0 Transcriptional regulator, LysR family n=1 Tax=C... 190 5e-47 UniRef50_A6VSP2 Transcriptional regulator, LysR family n=1 Tax=M... 190 5e-47 UniRef50_Q12DJ6 Transcriptional regulator, LysR family n=3 Tax=C... 190 6e-47 UniRef50_Q12DG5 Transcriptional regulator, LysR family n=1 Tax=P... 190 6e-47 UniRef50_A4FAR0 Transcriptional regulator n=4 Tax=Actinomycetale... 190 7e-47 UniRef50_P94403 HTH-type transcriptional regulator bsdA n=3 Tax=... 190 7e-47 UniRef50_A1W235 Transcriptional regulator, LysR family n=6 Tax=B... 189 9e-47 UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 Re... 189 9e-47 UniRef50_C1DL37 LysR family transcriptional regulator protein n=... 189 2e-46 UniRef50_C4K9T0 Transcriptional regulator, LysR family n=1 Tax=T... 188 2e-46 UniRef50_B0CAU2 Transcriptional regulator, LysR family n=1 Tax=A... 188 2e-46 UniRef50_C0D3N8 Putative uncharacterized protein n=2 Tax=Clostri... 188 2e-46 UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=A... 188 2e-46 UniRef50_D0J1D7 Transcriptional regulator, LysR family n=12 Tax=... 188 2e-46 UniRef50_Q1IBR2 Putative transcriptional regulator, LysR family ... 187 3e-46 UniRef50_A9KLP8 Transcriptional regulator, LysR family n=1 Tax=C... 187 3e-46 UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Ba... 187 3e-46 UniRef50_Q7W708 Putative LysR-family transcriptional regulator n... 187 3e-46 UniRef50_C6DI39 Transcriptional regulator, LysR family n=1 Tax=P... 187 3e-46 UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=R... 187 4e-46 UniRef50_B8IDW8 Transcriptional regulator, LysR family n=1 Tax=M... 187 4e-46 UniRef50_C9KMN5 Transcriptional regulator, LysR family n=1 Tax=M... 187 4e-46 UniRef50_Q03CT2 Fhu operon transcription regulator n=4 Tax=Lacto... 187 5e-46 UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=... 186 7e-46 UniRef50_Q1G7P1 Transcriptional regulator (LysR family) n=3 Tax=... 186 7e-46 UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepI... 186 8e-46 UniRef50_Q11BY5 Transcriptional regulator, LysR family n=1 Tax=C... 186 9e-46 UniRef50_C6C1H7 Transcriptional regulator, LysR family n=1 Tax=D... 185 1e-45 UniRef50_A8FAC2 Possible LysR family transcriptional regulator n... 185 2e-45 UniRef50_A8GI93 Transcriptional regulator, LysR family n=3 Tax=E... 185 2e-45 UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=A... 184 3e-45 UniRef50_UPI00019735EF LysR family transcriptional regulator n=1... 184 3e-45 UniRef50_C9RY94 Transcriptional regulator, LysR family n=8 Tax=B... 184 3e-45 UniRef50_Q6FDZ3 Putative transcriptional regulator n=1 Tax=Acine... 184 3e-45 UniRef50_UPI00016945D8 transcriptional regulator, LysR family pr... 184 4e-45 UniRef50_B1HQK1 HTH-type transcriptional regulator n=3 Tax=Bacil... 184 4e-45 UniRef50_B4SSK9 Transcriptional regulator, LysR family n=3 Tax=S... 184 4e-45 UniRef50_B2I0S1 Transcriptional regulator n=12 Tax=Acinetobacter... 184 4e-45 UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=... 184 4e-45 UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax... 184 5e-45 UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Sy... 183 6e-45 UniRef50_C5CMN8 Transcriptional regulator, LysR family n=1 Tax=V... 183 6e-45 UniRef50_D1A8L0 Transcriptional regulator, LysR family n=2 Tax=A... 183 7e-45 UniRef50_Q12BP5 Transcriptional regulator, LysR family n=1 Tax=P... 183 8e-45 UniRef50_C9XXC7 HTH-type transcriptional regulator budR n=7 Tax=... 183 9e-45 UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi... 182 1e-44 UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum ... 182 1e-44 UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bo... 182 1e-44 UniRef50_A8FJ94 Possible LysR family transcriptional regulator n... 182 1e-44 UniRef50_D0IWI0 Transcriptional regulator, LysR family n=3 Tax=C... 182 1e-44 UniRef50_B5JK93 Putative uncharacterized protein n=1 Tax=Verruco... 182 2e-44 UniRef50_A9C1Z6 Transcriptional regulator, LysR family n=1 Tax=D... 181 3e-44 UniRef50_B2JL76 Transcriptional regulator, LysR family n=10 Tax=... 180 4e-44 UniRef50_C0BFC4 Putative uncharacterized protein n=1 Tax=Coproco... 180 4e-44 UniRef50_B9Z173 Transcriptional regulator, LysR family n=1 Tax=L... 180 4e-44 UniRef50_B1ZQE5 Transcriptional regulator, LysR family n=1 Tax=O... 180 5e-44 UniRef50_D2Q131 Transcriptional regulator, LysR family n=1 Tax=K... 180 6e-44 UniRef50_D2R7I4 Transcriptional regulator, LysR family n=6 Tax=P... 179 8e-44 UniRef50_C6B9Q5 Transcriptional regulator, LysR family n=3 Tax=R... 179 9e-44 UniRef50_C8NRP5 Transcription regulator n=2 Tax=Corynebacterium ... 179 1e-43 UniRef50_Q984W9 Transcriptional regulator n=2 Tax=Mesorhizobium ... 179 1e-43 UniRef50_Q13JN6 Transcriptional regulator, LysR family n=7 Tax=B... 179 1e-43 Sequences not found previously or not previously below threshold: UniRef50_P39592 Uncharacterized HTH-type transcriptional regulat... 220 3e-56 UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=... 208 2e-52 UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 204 3e-51 UniRef50_B4T1W6 LysR family regulatory protein n=58 Tax=Enteroba... 203 5e-51 UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax... 203 7e-51 UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellula... 200 4e-50 UniRef50_Q97GH3 Transcriptional regulator, LysR family n=2 Tax=C... 200 5e-50 UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Ba... 200 5e-50 UniRef50_C6CYK3 Transcriptional regulator, LysR family n=3 Tax=B... 199 9e-50 UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=T... 199 1e-49 UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 ... 199 1e-49 UniRef50_Q7N4W1 Hca operon transcriptional activator n=2 Tax=Pho... 198 2e-49 UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n... 198 2e-49 UniRef50_C6PVA1 Transcriptional regulator, LysR family n=1 Tax=C... 197 4e-49 UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=S... 197 5e-49 UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=R... 195 1e-48 UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=A... 195 1e-48 UniRef50_A5VFC0 Transcriptional regulator, LysR family n=2 Tax=P... 195 1e-48 UniRef50_UPI00016C47B2 transcriptional regulator, LysR family pr... 195 1e-48 UniRef50_C8PWL4 Transcriptional regulator, LysR family n=1 Tax=E... 195 2e-48 UniRef50_C6D9U9 Transcriptional regulator, LysR family n=1 Tax=P... 194 2e-48 UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=C... 194 2e-48 UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=R... 194 4e-48 UniRef50_C2FUK4 Transcriptional regulator n=2 Tax=Sphingobacteri... 194 4e-48 UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n... 193 8e-48 UniRef50_C3NNS3 LysR family regulatory protein CidR n=22 Tax=Vib... 192 9e-48 UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synecho... 192 2e-47 UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=A... 192 2e-47 UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=R... 192 2e-47 UniRef50_Q8XFS3 Probable transcription regulator protein n=1 Tax... 191 2e-47 UniRef50_C6XUT8 LysR substrate-binding n=1 Tax=Pedobacter hepari... 191 3e-47 UniRef50_B2JUD8 Transcriptional regulator, LysR family n=12 Tax=... 191 3e-47 UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=A... 190 4e-47 UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Ac... 190 4e-47 UniRef50_Q5FRA7 Putative transcriptional regulator n=1 Tax=Gluco... 190 4e-47 UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=... 190 5e-47 UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus ... 190 5e-47 UniRef50_B2SBJ3 ALS operon regulatory protein n=36 Tax=Proteobac... 190 5e-47 UniRef50_A4W926 Transcriptional regulator, LysR family n=1 Tax=E... 190 6e-47 UniRef50_A9HZJ0 Transcriptional regulator, LysR-family n=2 Tax=B... 190 6e-47 UniRef50_B5XSE9 Transcriptional regulator, LysR family n=6 Tax=E... 190 6e-47 UniRef50_B0MH18 Putative uncharacterized protein n=4 Tax=Bacteri... 190 7e-47 UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 189 7e-47 UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=C... 189 1e-46 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 189 1e-46 UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=F... 189 1e-46 UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=P... 189 1e-46 UniRef50_A9VQL8 Transcriptional regulator, LysR family n=8 Tax=B... 189 1e-46 UniRef50_UPI0001C42298 LysR family transcriptional regulator n=1... 189 1e-46 UniRef50_O68014 HTH-type transcriptional regulator benM n=12 Tax... 189 2e-46 UniRef50_Q49UH5 Transcriptional regulator n=2 Tax=Staphylococcus... 188 2e-46 UniRef50_C6Q0M3 Transcriptional regulator, LysR family n=1 Tax=C... 188 2e-46 UniRef50_B1ZCQ9 Transcriptional regulator, LysR family n=3 Tax=R... 188 2e-46 UniRef50_UPI0001C35EAB LysR family transcriptional regulator n=1... 188 2e-46 UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus ... 188 2e-46 UniRef50_C1D4D4 Transcriptional regulator, LysR family n=1 Tax=L... 187 3e-46 UniRef50_B4ETB5 LysR-family transcriptional regulator n=7 Tax=En... 187 3e-46 UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=V... 187 3e-46 UniRef50_P94387 Uncharacterized HTH-type transcriptional regulat... 187 3e-46 UniRef50_Q97DV9 Transcriptional regulator, LysR family n=1 Tax=C... 187 4e-46 UniRef50_Q3JWC0 LysR family regulatory protein n=26 Tax=Burkhold... 187 4e-46 UniRef50_A5FB04 Transcriptional regulator, LysR family n=1 Tax=F... 187 5e-46 UniRef50_Q390Q2 Transcriptional regulator, LysR family n=6 Tax=B... 187 5e-46 UniRef50_B2JSK1 Transcriptional regulator, LysR family n=1 Tax=B... 187 5e-46 UniRef50_B1J8H5 Transcriptional regulator, LysR family n=5 Tax=P... 187 5e-46 UniRef50_C6PMR8 Transcriptional regulator, LysR family n=1 Tax=C... 187 5e-46 UniRef50_Q47141 Hca operon transcriptional activator n=46 Tax=Ga... 186 6e-46 UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=S... 186 6e-46 UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citroba... 186 7e-46 UniRef50_C2C4F2 LysR family transcriptional regulator n=1 Tax=Li... 186 7e-46 UniRef50_Q0S6C8 Transcriptional regulator, LysR family protein n... 186 7e-46 UniRef50_C4ZHT7 Transcription activator of glutamate synthase(Ly... 186 7e-46 UniRef50_B8J696 Transcriptional regulator, LysR family n=3 Tax=A... 186 7e-46 UniRef50_Q1YDL8 Transcriptional regulator, LysR family n=1 Tax=A... 186 9e-46 UniRef50_UPI0001694914 Transcriptional Regulator, LysR family pr... 185 1e-45 UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=... 185 1e-45 UniRef50_C2FRR6 LysR family transcriptional regulator n=2 Tax=Sp... 185 1e-45 UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding... 185 1e-45 UniRef50_A9I810 Transcriptional regulator, LysR-family n=5 Tax=P... 185 1e-45 UniRef50_Q049X7 Fhu operon transcription regulator n=13 Tax=Lact... 185 2e-45 UniRef50_C6BXQ9 Transcriptional regulator, LysR family n=1 Tax=D... 185 2e-45 UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=B... 185 2e-45 UniRef50_A3UQR4 Transcriptional regulator, LysR family n=1 Tax=V... 185 2e-45 UniRef50_B5CN01 Putative uncharacterized protein n=2 Tax=Bacteri... 185 2e-45 UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=A... 185 2e-45 UniRef50_D0IX94 Transcriptional regulator, LysR family n=2 Tax=C... 184 3e-45 UniRef50_B5GYU9 LysR-family transcriptional regulator (Fragment)... 184 4e-45 UniRef50_A5FXN6 Transcriptional regulator, LysR family n=6 Tax=A... 183 5e-45 UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=B... 183 5e-45 UniRef50_C1SLV8 Transcriptional regulator, LysR family n=1 Tax=D... 183 7e-45 UniRef50_Q28M96 Transcriptional regulator, LysR family n=3 Tax=R... 183 8e-45 UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=V... 183 9e-45 UniRef50_A1K6J7 LysR-family transcriptional regulator n=5 Tax=Pr... 182 1e-44 UniRef50_UPI0001A45942 HTH-type transcriptional regulator gltC n... 182 1e-44 UniRef50_C0CQ02 Putative uncharacterized protein n=1 Tax=Blautia... 182 1e-44 UniRef50_A9HWS6 Transcriptional regulator, LysR-family n=1 Tax=B... 182 1e-44 UniRef50_Q46S95 Transcriptional regulator, LysR family n=2 Tax=B... 182 1e-44 UniRef50_C5AIL5 Transcriptional regulator, LysR family protein n... 182 1e-44 UniRef50_C6D3A4 Transcriptional regulator, LysR family n=1 Tax=P... 182 1e-44 UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus ... 182 1e-44 UniRef50_A4JSC2 Transcriptional regulator, LysR family n=4 Tax=B... 182 1e-44 UniRef50_A6UMN5 Transcriptional regulator, LysR family n=1 Tax=S... 182 2e-44 UniRef50_C1DMS0 Transcriptional regulator, LysR family n=1 Tax=A... 182 2e-44 UniRef50_B1M8F7 Transcriptional regulator, LysR family n=4 Tax=R... 182 2e-44 UniRef50_B9XJ57 Transcriptional regulator, LysR family n=2 Tax=b... 182 2e-44 UniRef50_B8K739 Transcriptional regulator, substrate-binding of ... 181 2e-44 UniRef50_B1K332 Transcriptional regulator, LysR family n=6 Tax=B... 181 2e-44 UniRef50_B6B1G4 LysR family transcriptional regulatory protein n... 181 2e-44 UniRef50_B9JZE6 Transcriptional regulator LysR family n=1 Tax=Ag... 181 3e-44 UniRef50_C7JHS5 Transcriptional regulator LysR n=7 Tax=Acetobact... 180 3e-44 UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=P... 180 4e-44 UniRef50_C7JCS7 Transcriptional regulator LysR n=11 Tax=Proteoba... 180 4e-44 UniRef50_A9BWC5 Transcriptional regulator, LysR family n=6 Tax=P... 180 4e-44 UniRef50_A3VLP1 LysR family transcriptional regulatory protein n... 180 4e-44 UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=P... 180 4e-44 UniRef50_B0C1S6 Transcriptional regulator, LysR family n=2 Tax=C... 180 4e-44 UniRef50_C4WNV4 Probable cat1 operon transcriptional activator n... 180 4e-44 UniRef50_Q2RLB0 Transcriptional regulator, LysR family n=1 Tax=M... 180 4e-44 UniRef50_B0PCN4 Putative uncharacterized protein n=2 Tax=Bacteri... 180 5e-44 UniRef50_B0NJV3 Putative uncharacterized protein n=1 Tax=Clostri... 180 5e-44 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 180 5e-44 UniRef50_O33945 Probable cat1 operon transcriptional activator n... 180 6e-44 UniRef50_A0NPE1 Transcriptional regulator n=1 Tax=Labrenzia aggr... 180 6e-44 UniRef50_C7GBJ0 Transcriptional regulator, LysR family n=1 Tax=R... 180 6e-44 UniRef50_C9PFK4 Transcriptional regulator substrate-binding of L... 180 6e-44 UniRef50_P37499 Uncharacterized HTH-type transcriptional regulat... 179 8e-44 UniRef50_UPI000178812A transcriptional regulator, LysR family n=... 179 9e-44 UniRef50_B9X9V4 Transcriptional regulator, LysR family n=1 Tax=b... 179 9e-44 UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Sy... 179 1e-43 UniRef50_C1PEC2 Transcriptional regulator, LysR family n=1 Tax=B... 179 1e-43 >UniRef50_P52044 Uncharacterized HTH-type transcriptional regulator ygfI n=57 Tax=Bacteria RepID=YGFI_ECOLI Length = 298 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 298/298 (100%), Positives = 298/298 (100%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL Sbjct: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG 120 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG Sbjct: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE Sbjct: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF Sbjct: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH 298 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH Sbjct: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH 298 >UniRef50_C3BCJ4 Transcriptional regulator LysR n=1 Tax=Bacillus mycoides Rock3-17 RepID=C3BCJ4_BACMY Length = 298 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 112/291 (38%), Gaps = 11/291 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ KK+ F+ + + I RAA ++H+ P + ALEE++G L R L Sbjct: 1 MDL---KKLIYFVTIVEEGQITRAANRLHIAQPPLSMQLKALEEELGVILINRDKKEFEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 +G Y++ V + + E+ ++ IG + + L +KY Sbjct: 58 THSGFTFYRRAKEVLDSIDGMITEVKEEQEGLRGKLSIGTVKSCVPYLLPLLNKFKEKYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHV-SARVQELENLTISELPPLRLGFLVSRR 178 VT Q E + + L ++++ I + S V+ + +L+I L L + + Sbjct: 118 DVTFQLWEEDSQRLEELLLSKKIELGIVRLPLQSQDVKNINSLSIYPLHSEPLVAIQPKD 177 Query: 179 YEERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 +++ + E L+ P L + Q + G P II + Sbjct: 178 WDKFESNVVTIEELKNFPLLILHSQGDIYIFHKFVETCKTHGFTPKIICESSDVSTLMKL 237 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATM 285 E G + ++P A L+ +L YF+ P + ++Y + Sbjct: 238 AELGVGIAIVPKVAVHLLQQESLSYFEI--VPKIKSDTALIWIENKYMSKA 286 >UniRef50_P39592 Uncharacterized HTH-type transcriptional regulator ywbI n=9 Tax=Bacillales RepID=YWBI_BACSU Length = 301 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 118/295 (40%), Gaps = 13/295 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + + F+ +A+ + +A++ ++++ K I LEE++G LF R + L Sbjct: 1 MDI---RHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLEEELGIELFYRNGRQVEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLI-SLGDKY 118 AG +Y + + + + +E+++ + + IG+ + F +++ + Y Sbjct: 58 TDAGHSMYVQAQEIIKSFQNLTSELNDIMEVKKGHVRIGLPPMIGSGFFPRVLGDFRENY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 VT Q VE V + + D LD + + + + TI + L L S R Sbjct: 118 PNVTFQLVEDGSIKVQEGVGDGSLDIGVVVLPANEDI--FHSFTIVKE-TLMLVVHPSHR 174 Query: 179 YEERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + +E +L L++ P++ F+ I G P IIY + V Sbjct: 175 LADEKECQLRELKDEPFI--FFREDFVLHNRIMTECIKAGFRPHIIYETSQWDFISEMVS 232 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 + ++P R ++P +K P+ R RY + + E Sbjct: 233 ANLGIGLLPERICRGLDPEKVKVIPL-VDPVIPWHLAIIWRKDRYLSFAARAWLE 286 >UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Geobacillus RepID=A4ISN4_GEOTN Length = 305 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 107/292 (36%), Gaps = 10/292 (3%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + K+++ F+ +A+ I +AA+K+H+ P + + LEE++G LF RK + L Sbjct: 1 MIDVKQLKYFVTIAEEGQITKAAQKLHIAQPPLSQQLKQLEEKLGVPLFDRKAKKMELTA 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLISLGDKYEGV 121 G+ Y+K + +L E+ + + +G + + + + +++ V Sbjct: 61 PGKLFYEKAKQLLHQLDDAIAEVKEIETGATGTLAVGCVKSCFSYLAQTIRQFHEQFPNV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 T E + L +R +D I + + + I LP R ++ + Sbjct: 121 TFHLREGDTFSICQLLQERHIDIGIVRLPIDSSHYD-----IIPLPSDRYVAVLPEHWAL 175 Query: 182 RQEQ---ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + E P L + + A + R G P ++ +S V +G Sbjct: 176 SRSSLSMRDFAEWPLLLLHRVHGAGQYERVVEECRRHGFEPNVLCECPDATILLSLVAQG 235 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 T++P L ++ M E I RY + H Sbjct: 236 MGATIVPQSTVSLFRLPGIRVLPIVDSSM-KAEAAVIIDRQRYVPKSVHHFL 286 >UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=Clostridiales RepID=B8FPA0_DESHD Length = 295 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 60/286 (20%), Positives = 111/286 (38%), Gaps = 17/286 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I K + F+ +A+ + ++AAEK H+T S K I LE ++G +LF R + L Sbjct: 1 MEI---KHLEYFVEVARQKSFSKAAEKCHVTQSTISKLIKDLEGELGTSLFNRTSKYVQL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLI-SLGDKY 118 G + + + + +E N +I IG+ T +F +L+ KY Sbjct: 58 TDTGAIFLDQALEIVTKFENLTHEFQNRIKLERGKIAIGLLPITGTTLFAELLGEFKKKY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + E VI ++ D LD + ++ E+ +E P L +VS R Sbjct: 118 PQIEISLSERGSKKVIMDILDGTLDVGVVCSVPDSQY--FESFAFAEDP---LYVIVSVR 172 Query: 179 YE----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + L + P++ + + + I + + G P II+ F Sbjct: 173 NPISKLASIDLKSLADEPFV--LYSSEFSLHDEIISKCKNEGFAPNIIFETSQFELMTQM 230 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHR 280 V + +P A R ++P + P + + + R Sbjct: 231 VAADLGIAFLPGAACREMDPRRFAVIPVTN-PQIIHQMFIIWKRGR 275 >UniRef50_Q9RYH7 Transcriptional regulator, HTH_1 family n=2 Tax=Bacteria RepID=Q9RYH7_DEIRA Length = 316 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 119/291 (40%), Gaps = 13/291 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A N+ RAA ++ + P + I LE +IG LF R + L +AG Sbjct: 20 RHLRYFLAVADERNVTRAAARLGIQQPPLSQQIRELEREIGTPLFHRVPRGVELTEAGHT 79 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDN--TYPTIIFDQLISLGDKYEGVTA 123 + + + ++ +E +GR + E+ +G + + L D Y V Sbjct: 80 FLRLVQSIPAQVEGATHEARRAGRGETGELRVGFTGAASINPQVQGLLRRYRDLYPDVRL 139 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 E + ++D L QLD +++ Q L +LT++ + + +V R + Q Sbjct: 140 TLTEKNTVTLLDELRSHQLDAVLAR----PLPQHLGDLTLTLVAREPMVAVVPRGHPAAQ 195 Query: 184 EQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 + L L++ ++ + + R G P + ++ +S V G Sbjct: 196 TRPLPLERLRDETFITTPREFGPLIYDTVWQACRAAGFEPRLGQLAPQMLSIVSLVAAGL 255 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 ++++P A R +N +Y + P+ + R H AT+L A Sbjct: 256 GVSLVPD-AMRRLNLEGCEYLEL-RPPVPTVDLTLLCRPHERAATVLNFTA 304 >UniRef50_C3AN59 Transcriptional regulator, LysR n=4 Tax=Bacilli RepID=C3AN59_BACMY Length = 314 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 116/290 (40%), Gaps = 4/290 (1%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R FI++A+ + RAA ++HM P + ++ LE+++ +LF R N+ L Sbjct: 25 MDI---RQLRYFIVIAEERQLTRAAHRLHMAQPPLSRQLSLLEQELSVSLFERNGRNMHL 81 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 + G+ LY+K + Q+L EI ++G + IG ++ + +++ + Y Sbjct: 82 TEEGKILYRKAKSIIQQLEETITEIKDTGEGLRGNLSIGAFHSCIPFLSEKIRYFQENYP 141 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V + E +I+ L +R ++ + + + ++ + Sbjct: 142 NVNLKVWEGGPLYLIEQLENRNIELAVLRTPFNKKAFSSICVSKEPFVLVMPAKWELHHS 201 Query: 180 EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 L +P L + ++ ++ GI I + + G Sbjct: 202 NLPISITKLDHIPLLLLHKDKEDSYHQLVIDECSRHGIKLNIACECPDSAFVLMLIMAGI 261 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 +++P A + ++ D P + + +++ + + + + I Sbjct: 262 GASILPKSAVSYIPQEFIRIVDLIDFPFQSESSIIWLKDRKLSNSARRFI 311 >UniRef50_A5WF28 Transcriptional regulator, LysR family n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WF28_PSYWF Length = 293 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 121/284 (42%), Gaps = 12/284 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFT----RKDNNI 58 + K++R F+ + +T +A+ ++++T KSI +LEE +G LF + + Sbjct: 1 MITLKQLRCFVTVVKTGGFLQASIQLNLTQPTVTKSITSLEEYLGVALFDKPLTHRKRLV 60 Query: 59 SLNKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLISLGDK 117 +L + G+ LY + + Q+ ++ + + + + ++ +GI I+ + + + Sbjct: 61 NLTEIGEHLYIQAVDILQKADNLEQTVLDYQQLKGGKLRLGISPLGSEILSEAIFNFYQM 120 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 + + +E + D L QLD + + + + +I P + + Sbjct: 121 HPSIDISLIEDGAESLKDALLQGQLDVATLMKPID---DDFDYFSICSYPVMVVANKKRM 177 Query: 178 RYEERQE-QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 ++ + + L P + F + ++F MI N + G P II + + I V+ Sbjct: 178 GKQKTKVTLKSLSNAPLI--LFTSNSSFTPMIIQNCQALGFEPNIICQTNQWHLLIDMVK 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHR 280 + +T++P + + ++ L +P E + + R HR Sbjct: 236 QDMGVTLLPQYYTQKLDLTELVCLPLT-QPQLKWELVMAWRRHR 278 >UniRef50_B9IRL1 HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family n=23 Tax=Bacillus RepID=B9IRL1_BACCQ Length = 310 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 118/295 (40%), Gaps = 14/295 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +K+R FI++A+ + RAA+++HM P + ++ LE+++ LF R N+ L Sbjct: 21 MDI---RKLRYFIVIAEEKQLTRAAQRLHMAQPPLSRQLSLLEQELSVNLFERNGRNMYL 77 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 + G LY K + +L EI ++G ++ IG ++ + +++ D Y Sbjct: 78 TEEGNILYTKAKNIILQLEETITEIKDTGEGLRGKLSIGAFHSCIPFLSEKIRYFQDNYP 137 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V + E + +I+ L +R ++ I + V + L ++ ++ Sbjct: 138 NVNLKIWEGGPSYLIEKLENRHIELAILRTPFNKDV-----FSSICLSKEPFVLVMPAKW 192 Query: 180 EERQEQ-----ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 E L +P L + ++ ++ + GI I + Sbjct: 193 ELYHSHLPIPLTELSHIPLLLLHKDKENSYHQLVIDECKHLGITLNIACECPDSAFILML 252 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + G +++P A + +K D P + + ++ + + + I Sbjct: 253 IMTGIGASILPKSAVSHIPQEFIKIVDLIDFPYESESSIIWLKGRKLSKRAQRFI 307 >UniRef50_B2TMS2 Transcriptional regulator, LysR family n=3 Tax=Clostridium botulinum RepID=B2TMS2_CLOBB Length = 299 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 120/298 (40%), Gaps = 17/298 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R F+ +A+ +I AA+K++++ P K + LEE++G TLF R ++ L Sbjct: 1 MDI---RQLRYFLTIAEEGHITAAAKKLNISQPPLSKQLKLLEEELGVTLFNRTSRSLEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQ-LISLGDKY 118 AG L K + + + NE+ N + IG + + Q + +Y Sbjct: 58 TDAGILLQNKSSQLLELYKSTVNEMKNFNNGIEGTLGIGTVCSSGINVLPQKIKEFCKQY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQE---LENLTISELPPLRLGFLV 175 + + E + +++ L + +D + + + +++ + L + Sbjct: 118 PKIDYEIYEGNSFKIMELLNNGVIDVGFVREPFNLSLYNSFVIKDNLENNLNDYFVAIAK 177 Query: 176 SRRYEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAK 231 S+ Y + + L++ P + R ++ +I + G P II + + Sbjct: 178 SKFYNSIESNTILINKLKDKPLIINR-----RYDDIIKSACNKAGFEPHIICKNDDIITS 232 Query: 232 ISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 +S E G ++++P A ++ LK + L +N + I Sbjct: 233 LSWAEAGIGISILPLTASNILPNVNLKIKKIIEPSIESYLRLIWTKNKPLSNISRNFI 290 >UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3E5_THIIN Length = 301 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 105/276 (38%), Gaps = 14/276 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F+ +A+ + +RAAE++H++ P I ALE++IG L R + ++L AG Sbjct: 4 RQLRYFVTIAEQGSFSRAAERLHISQPPLSTQIKALEDEIGARLLERSNRGVTLTAAGAA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP-TIIFDQLISLGDKYEGVTAQ 124 ++ + V +L + + R + + IG + I+ L S +Y V Q Sbjct: 64 FFEDIRSVLAQLEHAVERVRQAERGDAGTLSIGFVSIADFGILPPTLKSFRARYPQVDVQ 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E + + I L +LD I V LT + L L + QE Sbjct: 124 LHELTTDAQIRELRAAELDLSIGLAPVDEP-----GLTFTPLLQEPLMLAAPTTHPVLQE 178 Query: 185 ------QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 L + P++ + + + G P I I V G Sbjct: 179 GSGAVDLRALAKEPFIVPPRNIGPGLYDLTLSLCQAAGFAPRITQHARQMQTVIGLVSCG 238 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLY 274 + ++P R + ++Y +P ++ + Sbjct: 239 MGVALVPAS-LRQLKRPGVQYRPLLGQPATIELGIL 273 >UniRef50_A6LVD0 Transcriptional regulator, LysR family n=5 Tax=Clostridium RepID=A6LVD0_CLOB8 Length = 288 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 117/295 (39%), Gaps = 19/295 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI K+++ F +A+ I AA+++HM P + LE+++G L R NI L Sbjct: 1 MDI---KQLKYFYAIAEEGQITNAAKRLHMAQPPLSYQLKNLEDELGVKLVERGSRNIRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFD-QLISLGDKY 118 AG LY++ + + +NE+ + + + + IG ++ + D +L +KY Sbjct: 58 TDAGVILYKRAKQILSLTKSTENELKDFKQGNHGTLSIGTVSSSGASLLDSRLNIFHEKY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + + E + +++ L ++ I + + LP + + + Sbjct: 118 PFINFEIHEGNTYELLELLDKGIIEIAIVRTPFNNS-----GINSIFLPKEPMVAAMRKD 172 Query: 179 YEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + L + P + R FE++I + PT+ + + Sbjct: 173 LNWTDSEIINITELNDKPLIFYR-----RFESLIFKVCQDFNFQPTVFCKNDDARTSLLW 227 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + ++P A +L+ +++ Y + + Q + + +++ + Sbjct: 228 ANSGLGIAIVPKSAIKLIGSSSIIYKEIDSDILTTQIAIIWSKTGYLSSSGKNFL 282 >UniRef50_A7GMD6 Transcriptional regulator, LysR family n=3 Tax=Bacillaceae RepID=A7GMD6_BACCN Length = 294 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 116/293 (39%), Gaps = 12/293 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R F +AQ I RAA+++HM P + + LE+++G L R + L Sbjct: 1 MDI---RQLRYFYTIAQEGQITRAAKRLHMAQPPLSQQLKLLEQELGVQLLERNGRKLEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG L++K + E+ G + IG + + I D+L S + Y Sbjct: 58 TEAGHVLFKKTKEILTHFHETITEVKEVGSGLKGTLSIGSVKSAFSYIPDRLRSFHETYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 VT + E + + +R+++ I + E+E+ LP + ++ Sbjct: 118 LVTFRLQEGDSFRLAQLIKNREIELAIVRLPL-----EMEDFASLSLPADQFVAVMPNDK 172 Query: 180 EERQ---EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + + + L +LP + ++ + N + G+ P II +S V Sbjct: 173 ADNRSMISMKELAKLPLMLLQRIKGFGLYEKVLENFQKHGLKPNIICDCPDAAMLLSLVR 232 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G T++P + +K D + + ++N + L + Sbjct: 233 SGIGCTLLPKSTLIALPLNGIKMMDIEDSTITSDSAVIWLKNRSLSKVALHFL 285 >UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945AE Length = 303 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 105/290 (36%), Gaps = 14/290 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + ++ FI + + + +AA+ +H+T K I +E+++G L R + L A Sbjct: 7 LDIRHLKYFIEVVRCKSFTKAADVLHITQPTISKMIKNIEDELGVVLLDRSTKQVMLTDA 66 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 GQ + + + + + E+ N+ + +I +G+ + F +I KY + Sbjct: 67 GQSILLQAQQIVKSFENLSIELANTIHLKKGKIRMGLPPMVGSRFFPHIIGEFHHKYPNI 126 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 Q +E V + + + LD + + + + +L +V ++ Sbjct: 127 EIQLIEEGAKKVEEQVEEGHLDIGVVLLPIPSGTFDSFPFVHE-----KLMVVVYPKHRL 181 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + + L+ P++ R I G P ++Y + V Sbjct: 182 AGQTVIALKKLEHEPFILFR--EGFVLHDRIPEECIRAGFQPKVVYESSQWDFISEMVAA 239 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 G ++++P R +NP + P +Y + ++ Sbjct: 240 GLGISMLPESICRELNPNRVITIPLVE-PSIDWSLAMIWPKEQYISYAVR 288 >UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=Paenibacillus RepID=C6CYG5_PAESJ Length = 297 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 112/286 (39%), Gaps = 15/286 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 ++++ I +A N +RAAEK+H+ + ++ LE+++G LF R N++ L +AGQ Sbjct: 4 RQLQYVIQIAIEKNFSRAAEKLHIAQPSLSQQLSKLEQELGVLLFRRTTNSVELTQAGQV 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQ-LISLGDKYEGVTAQ 124 K + + + E+ + + + +V+G + I L G+ Y + Sbjct: 64 FVDKSQSILDAIEQLKQEMDDMAQMKRGRLVVGTLPITGSHILPLVLPVFGELYPQIEVI 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 VE + + + D + + + E E L E+ L S R R + Sbjct: 124 LVEDTTVKLEQLTANGGTDISLLTLPLVDQTLEWEPLMEEEIC---LAVPPSHRLAGRTD 180 Query: 185 QELLQELPWLQMR-FQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTV 243 + ++EL + F ++ + G P I++ + S + G +T Sbjct: 181 EISIEELREEHFVGLKKGQGFRQILVHLCQQAGFTPNIVFESSNIETVQSLIAGGMGITF 240 Query: 244 IPHFAWRLVN----PATLKYFDAPHRPMYMQEYLYSIRNHRYTATM 285 +P R P L D P R + + + R RY + Sbjct: 241 VPKMLTRAAGGDFVPVYLSLKDRPSRTL-----IIASRKGRYLSKA 281 >UniRef50_A6EE41 Transcriptional regulator, LysR family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EE41_9SPHI Length = 290 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 60/271 (22%), Positives = 112/271 (41%), Gaps = 9/271 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ FI A+ + AA +T S + I LEE++G LF R + L +AG+ Sbjct: 4 RQLNYFIKAAELLHFTEAAAASFVTQSTLSQQIKQLEEELGMLLFDRIGKQVRLTEAGKL 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQP 125 + + I + E+ IG+ + +++ L KY G+ Sbjct: 64 FLSHARQIMLDIKKSKQAIFELNNLINGELKIGVTYAFSSLLLPALRPFSKKYPGIMIHI 123 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 + L LDFI++ S E+L + L R+ +V+++ Q Sbjct: 124 EYGIAGELETKLRRADLDFILAFHEQSPN----EDLEMQHLFSSRIKMVVAKKNPLAQMS 179 Query: 186 EL-LQELPWLQMRFQNRA-NFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTV 243 ++ ++EL ++M N+ + +ID + INP I + +S VE G+++T+ Sbjct: 180 KISIKELGQVEMILPNKGFSSRDLIDEIFKKNKINPQIKIEMNDTHSLLSLVETGNWVTI 239 Query: 244 IPHFAWRLVNPATLKYFDAPHRPMYMQEYLY 274 I A + N L + +Y Q Y+ Sbjct: 240 INEKA--IGNWKNLVAVPISGKELYKQAYIL 268 >UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHL3_ACIBL Length = 306 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 109/305 (35%), Gaps = 14/305 (4%) Query: 1 MD-IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNIS 59 MD + +R F+ +A+ + RAA ++H+ P + I LEE +GY LFTR + Sbjct: 1 MDNEIELRHLRYFVAVAEELHFGRAAARLHLAQPPLSQQIKKLEEILGYALFTRTSRAVK 60 Query: 60 LNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLI-SLGDK 117 L AG+ ++ + + E+ + GR + +G + + + Sbjct: 61 LTSAGEVFLERAQRTLRHVREDMEEVRSIGRGEVGYLRVGFIGSSMLTVLPAIFGRYRRA 120 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 Y V Q E +GV++ L LD I LT+ L ++ Sbjct: 121 YPKVNLQLQESYTSGVVEGLLKATLDAGILR-----DGGPTHGLTVERLYSEPFVAVLPG 175 Query: 178 RYEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 ++ +++ L L++ P++ + + G P ++ ++ + Sbjct: 176 KHPLAKQRALSPRALKDEPFVFYPPYSSKLAYEKPVSICEAHGFRPKVVQEAPQWLTILR 235 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 V G +++ P R+ P + + R + R Sbjct: 236 LVGAGLGVSIAPACVERIAAPD--VVCIPLRGAAVRSDIELAFREGEGREIVRAFAEIVR 293 Query: 294 DGTSH 298 DG +H Sbjct: 294 DGFAH 298 >UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=Edwardsiella RepID=C5BDD2_EDWI9 Length = 330 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 117/288 (40%), Gaps = 4/288 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + ++ FI +A+ + RAAE+++++ P + I +LE ++G L R + ++SL +AG Sbjct: 23 RHLKYFIAVAEERHFNRAAERLNISQPPLSQQIQSLERELGACLLMRTNRSVSLTQAGSL 82 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTI--IFDQLISLGDKYEGVTA 123 ++ + + +L + + R + ++ IG ++ P I + L S +Y V Sbjct: 83 FLKECYSIVGQLEQAAEKAARAHRGETGDLTIGFTSSVPFIPRVAHSLFSYRHRYPQVHL 142 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 Q E + I+ L D +LD I + V + L L + + + Sbjct: 143 QMRELNTKQQIEPLVDGKLDIGILRNTLLPGVLKHRVLQREPLVAVLHRHHPLAQRGQAL 202 Query: 184 EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTV 243 L + P++ + + + ++ GI P I M + + G +++ Sbjct: 203 RFSDLADQPFVFFSRGDGTALYDELLSLLKRAGIVPYITQEVGEAMTIVGLISAGLGVSI 262 Query: 244 IPHFAWRL-VNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 +P R+ V+ + D P + + R AT L + Sbjct: 263 LPASYTRIQVDGVCYRALDEPDAYTEVWLAYHRQRPLSAQATALIALL 310 >UniRef50_Q13T34 Transcriptional regulator, LysR family n=60 Tax=Proteobacteria RepID=Q13T34_BURXL Length = 334 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 117/292 (40%), Gaps = 13/292 (4%) Query: 2 DIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLN 61 +I + +R F+ + + + AAE++ +T K + +LE++IG L R + L Sbjct: 13 EIVELRALRYFVEVVRQQSFTVAAEQMFVTQPTISKMVKSLEDEIGSPLLLRDGRQMVLT 72 Query: 62 KAGQELYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTIIFDQLISLGDKYEG 120 AG+ +YQ+ V + + E+++ R ++ IGI ++ + + +Y Sbjct: 73 DAGRIVYQRGQDVLAAHAQLQAELNDLDTLGRGQLTIGIPPMGGSLFTPAIAAFRQRYPK 132 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + + E + L + +L+ Q V + +E L ++ L L ++ Sbjct: 133 IELKLFEQGSRAIEAALINGELELGGVLQPVDP--ENIEVLPVTR-QLLWLVARTGSNWD 189 Query: 181 ERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + E L L P++ + ++ R G PTI+ R + + V G Sbjct: 190 DLHEVPLAQLANEPFV--FYGESLALNDVVLNACRTAGFAPTIVGRSGHWDFMAALVLAG 247 Query: 239 HFLTVIPHFAWRLVNPA--TLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 + ++P R ++PA T + P P M R + Y + + Sbjct: 248 VGIALLPAPYCRRLDPAKFTCRPVIEPEIPWEM---AIGWRRNGYLSHAARA 296 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 55/287 (19%), Positives = 112/287 (39%), Gaps = 9/287 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ F+ +++ + RAAEK++++ + I ALE ++G LF R ISL +AG+ Sbjct: 12 RQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISLTEAGRV 71 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIG-IDNTYPTIIFDQLISLGDKYEGVTAQ 124 L ++ + + I + +G + IG + ++ ++ +Y + Sbjct: 72 LLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAILDFNKQYPNIELS 131 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ- 183 + + + L +LD I+ V + L SEL L S ER+ Sbjct: 132 VLGLRTGEIREKLLQNELDIGITFLPVQDKEIVSIPLYKSEL---TLVVPTSHSLTERKY 188 Query: 184 -EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 E LQ+ P + + +I ++ + P I + + I V +G +T Sbjct: 189 VSIEELQDYPLILL--PKNFYLTELITSHCQNFNFKPKPILEISTMESLIQMVAQGMGIT 246 Query: 243 VIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V+P + ++ + + L R+ A + I Sbjct: 247 VLPKPYIDFLQNEHIQAIKIENPTPTIDIGLIYRRDKYMCAATRKFI 293 >UniRef50_B4T1W6 LysR family regulatory protein n=58 Tax=Enterobacteriaceae RepID=B4T1W6_SALNS Length = 295 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 112/300 (37%), Gaps = 16/300 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + +R F+ + + + RAAEK+ +T K + LE+++ TL R + L Sbjct: 1 MDI---RTLRYFVEVVRQQSFTRAAEKLFVTQPTISKMLKNLEDELNCTLLIRDGRKLLL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLISLGDKYE 119 G+ ++++ + ++ E+ + + +GI ++ + +Y Sbjct: 58 TDTGRVVFERGLAILAEFRQLEAELSDINHLNKGVLRLGIPPMVGMLMAGPISLFRQRYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 GV + EF V + + +LD ++ V +E LT L L LV R Sbjct: 118 GVELKISEFGGLTVQQAVMNGELDVAMTALPV----EEASGLTTLSLFSHPLCVLVPRSG 173 Query: 180 E----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + + E L E P + + + + P I R + + V Sbjct: 174 QWTTCDSIAPEALAEHPL--LIYNEDFALSRQLMTLFSQHDVKPRIAVRSGQWDFLAAMV 231 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDG 295 + G + ++P + ++ ATL++ + R Y + + +G Sbjct: 232 QAGVGIAILPEPICQRLDKATLRWLPLESD--LRWQLGMIWREGVYLSHSARAWLTCCEG 289 >UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=Enterobacteriaceae RepID=C5BEX8_EDWI9 Length = 312 Score = 203 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 112/296 (37%), Gaps = 12/296 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + +R F+ + + ++ RAAEK+ +T K + LEE++G TL R+ + L Sbjct: 1 MDV---RTLRYFVEVVRQHSFTRAAEKLFVTQPTISKMLRNLEEELGCTLLIREGRGLRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGIDNTYPTIIFDQLISLGDKYE 119 +G +YQ+ + + + E+ + G + + +GI T + + +Y Sbjct: 58 TDSGNVVYQRAQTILDQFGQLRTELDDLGALKKGSLKLGIPPMVGTQMAGLIGEFRQRYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 G+ EF V + +LD ++ + Q + L L L+ R+ Sbjct: 118 GIELHIAEFGGLTVEQAVLSGELDLALT----ALSAQPDPAIASLPLFSHPLYVLLPRQA 173 Query: 180 EERQEQEL-LQELPWLQ-MRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L + +L + + + G+ P I R + + V+ Sbjct: 174 PWLTRSALGMTDLAQQNILLYNEDFALYQQLMQAFSAAGVKPQIAVRSGQWDFLAAMVQA 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 G + ++P + ++P +L + P M + RY + Q Sbjct: 234 GVGIAILPQPICQRLDPHSLLWLPL--APTLMWRLGLIWCHGRYLSHSAQAWIARC 287 >UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax=Bacillus RepID=ALSR_BACSU Length = 302 Score = 203 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 90/251 (35%), Gaps = 7/251 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + ++ FI +A+ + +AA +++MT P + I LEE++G TL R + L AG+ Sbjct: 4 RHLQYFIAVAEELHFGKAARRLNMTQPPLSQQIKQLEEEVGVTLLKRTKRFVELTAAGEI 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYP-TIIFDQLISLGDKYEGVTAQ 124 ++ + R +VIG + + + K+ V + Sbjct: 64 FLNHCRMALMQIGQGIELAQRTARGEQGLLVIGFVGSATYEFLPPIVREYRKKFPSVKIE 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY--EER 182 E S + + L +D I + +E ++ P L +E Sbjct: 124 LREISSSRQQEELLKGNIDIGILHPPLQHTALHIET---AQSSPCVLALPKQHPLTSKES 180 Query: 183 QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 E L++ P + + + G P I+ + I V G +T Sbjct: 181 ITIEDLRDEPIITVAKEAWPTLYMDFIQFCEQAGFRPNIVQEATEYQMVIGLVSAGIGMT 240 Query: 243 VIPHFAWRLVN 253 +P A +L N Sbjct: 241 FVPSSAKKLFN 251 >UniRef50_C0Z7P7 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7P7_BREBN Length = 290 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 114/292 (39%), Gaps = 15/292 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R FI +A+ I AA++++M P + + +EE++G L R I L Sbjct: 1 MDI---RQLRYFIAIAEEGQITGAAKRLNMAQPPLSQQLKQMEEELGTMLVERSGKQIVL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG LY++ + ++ +E+ +G + IG+ + +Q+ KY Sbjct: 58 TEAGITLYKQALNIVHQMEEALSEVKETGEGIRGTLSIGVSALSAYRLPEQIRVFQQKYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVS--R 177 +T + + + L R ++ I S L N T+ L +V Sbjct: 118 LITYKIWKGDTQLLNQWLERRTIEVAIVRLPHS-----LNNCTMIPLEEEDFVLIVPATS 172 Query: 178 RYEERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 Y +R+ E+ + ELP + M +I G+ P +I +S V Sbjct: 173 PYADRKAIEMREIAELPLI-MPSTPGLGIYDLIIKEFSRLGVEPHVICECPDISLIVSMV 231 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 +++P AW ++ +Y + ++ R+ + Sbjct: 232 ASSVGSSIVPISAWETHQSEQIRGIRLSGTSIYSSAAVV-WQSGRHLSKAAN 282 >UniRef50_A0KPM6 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A0KPM6_AERHH Length = 297 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 108/295 (36%), Gaps = 10/295 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + +R F+ L + + RA+EK+ +T K I +EE++G L +R +L Sbjct: 1 MDI---RALRYFVELVREQSFTRASEKLFVTQPTISKMIRNMEEELGQPLLSRAGRRFTL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLISLGDKYE 119 +G+ L+ + + + ++ E+ + + +GI + D + + +Y Sbjct: 58 TDSGRVLFNRAQTILAEMQQLEAELADLQSLQFGRLALGIPPMVGHVYADLIRAYRSRYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR-R 178 V VE+ + + + +LD I+ L L + + P + + R R Sbjct: 118 KVELSIVEYGGRRIEQAVLEGELDLAITMLPTK-EGGALSALELDQYPIQVVLPDLPRWR 176 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 E L + P+ + + ++ R G P + R + + V G Sbjct: 177 DCPEIRLEALCDEPF--LLYTQAFTLSERLEQACRVAGFEPQVAARSSQWDFLTAMVRSG 234 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 + +P R + P L P P + RY + + Sbjct: 235 MGVAFLPEPICRRLAPDGL--VLRPLVPELSWRLGVIWPSERYLSRTAEAWLALC 287 >UniRef50_C3I9W8 HTH-type transcriptional regulator alsR n=1 Tax=Bacillus thuringiensis IBL 200 RepID=C3I9W8_BACTU Length = 292 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 103/247 (41%), Gaps = 13/247 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ LA+ N +RAAEK+H+ P K I LEE+IG LF R ++ L AGQ Sbjct: 4 RHIRYFLALAEELNFSRAAEKLHIAQPPLSKQIKDLEEEIGAKLFNRTKRHVELTNAGQV 63 Query: 67 LYQKLFPVYQRLSA--IDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQ 124 K + + ++ I + ++G E+VIG + +I + ++Y V Sbjct: 64 FLDKSYQILDQVEQACISTRLTSTGTE-GELVIGFSGSVQDLI-PTIQRYRERYPKVGIV 121 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 + S + NL ++++D I +++ + + + + L ++ ++ + Sbjct: 122 LQQLSTTIQVKNLIEKKIDIGILAAPINSS-----KIHVRPVKKVCLRAIIPEKHPLAIK 176 Query: 185 QEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 Q + L+ P++ + + G P I + + V G Sbjct: 177 QSIYIHDLENEPFIMATKSAAPFYYETFMNLFQSVGFAPKITVQANDLQTVSALVANGMG 236 Query: 241 LTVIPHF 247 + ++P Sbjct: 237 VALLPSS 243 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 13/249 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F +A+ +++ RAA ++H+ K I+ LE ++G TLF R ++ L +AG+ Sbjct: 4 RHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEAGEA 63 Query: 67 LYQKLFPVYQRLSAIDNEIH-NSGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 L + ++ + G ++ + IG T + L++ +Y G+T + Sbjct: 64 LLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTVGAHLLPPLLTIFHQRYPGITLR 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E ++D L D + V+ E LT++ L L +VS + + Sbjct: 124 LHEAGIQSLLDLLEAGITDLAVVALPVTD-----EQLTVTPLLNEPLVLIVSTTHPLARR 178 Query: 185 QEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 E+ L+ W+ + R G P + + V G Sbjct: 179 SEVMMTELRHERWI--LSPSSYELREATLKACREAGFTPQTVLEGGETETLVRFVAAGLG 236 Query: 241 LTVIPHFAW 249 ++++P A Sbjct: 237 VSLVPALAV 245 >UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGS2_AZOVD Length = 301 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 100/270 (37%), Gaps = 12/270 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + +++R F+ LA+ + +AAE +H+T P + I+ALE +G LF+R ++ L Sbjct: 1 MIELRQLRYFMALAEHLHFGKAAESLHITQPPLSRQISALEADLGVVLFSRHSRSVELTA 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLI-SLGDKYEG 120 AG++ Q L S R E+ + I+ +L+ + D Y Sbjct: 61 AGRDFQQHAKTALAELDLAIRSTRASARGERGELRVSFTMVAAWILLPELLKAYSDAYPD 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V+ E + L + D ++ ++ +L L L ++ + Sbjct: 121 VSLALNEVLPRDLGPALERGEADIALTFPSSGSK-----SLCYRALRREPLCAVLPASHP 175 Query: 181 ERQEQE----LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 E L + P++ Q + + R G P I + ++ V Sbjct: 176 LAAATEFSIAALADEPFITFPRQTAPALHEAVMSCCRRAGFEPKIRLETHLQQTIVNLVA 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRP 266 G ++V+P R + + + P Sbjct: 236 EGLGVSVVPGSM-RKMRMPGVAFKAIDRSP 264 >UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=C9YBM2_9BURK Length = 309 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 110/301 (36%), Gaps = 12/301 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++++R F+ +A+ + +AA ++HM+ P + I LEE +G TLF R ++ L A Sbjct: 13 LETRQLRYFVAVAEELHFGKAAVRLHMSQPPLSQQIRQLEEGLGVTLFERTQRSVKLTYA 72 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQ-LISLGDKYEGV 121 GQ + +L + + + R + + G + + + +Y V Sbjct: 73 GQVFLAQARNALSKLEEAVDVVRAAARGEAGFLRCGYTAASAYAVIPSVMHAFKQRYPLV 132 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E ++ + +LD + L +L +L L + + Sbjct: 133 EVALRESLSGDQYRDIREGRLDIGLVR-----PFGALPDLATEKLIEENLIVAIPSEHPL 187 Query: 182 RQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 Q + LQ P++ F M++ + + P ++ R A I+ V Sbjct: 188 AQQRIVDIHDLQSQPFVGFSSYGSQYFHDMVENLLGGEKVVPKLVQRATQPHAVIALVSA 247 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 G L ++P + R V+ + Y + E R + + A R+ + Sbjct: 248 GLGLAIVPDASAR-VHMDRVVYRPLHASRLPRPELHLCWRRENISPLISNFKASAREVAA 306 Query: 298 H 298 Sbjct: 307 Q 307 >UniRef50_Q97GH3 Transcriptional regulator, LysR family n=2 Tax=Clostridium RepID=Q97GH3_CLOAB Length = 286 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 111/294 (37%), Gaps = 20/294 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI K+++ F +A+ I AA+K+H+ P + LE ++G L R NI L Sbjct: 1 MDI---KQLKYFYTIAEEGKITTAAKKLHIAQPPLSYQLKNLETELGVKLVERGSRNIKL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIG-IDNTYPTIIFDQLISLGDKY 118 AG LY + + +E+++ + + IG + ++ +++ + LI KY Sbjct: 58 TDAGLMLYNRAKQILNLTQTTIDELNDFKNGTHGTLSIGTVSSSGWSLVNNILIKFHKKY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + + E + +++ L ++F I ++ L LP + ++ Sbjct: 118 PLINFEIHEGNTYELLEILKRGIIEFAIVRTPFNSY-----GLNCIYLPKEPMVAVMRED 172 Query: 179 YE----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + L++ P + R FE +I P + + + Sbjct: 173 FNYSLSNTTKISELKDKPLIFYR-----RFEKLIYEACENSNFRPKVFCKNDDARTTLLW 227 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G + ++P L N + L Y + Q +N+ +++ Sbjct: 228 ASAGFGIAIVPKSVVSLGN-SNLIYKKIEDASLSTQLAAIWPKNNYISSSAKNF 280 >UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J455_9BACL Length = 307 Score = 200 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 109/291 (37%), Gaps = 8/291 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ + +A+ N +RAA+K+H+ + ++ LE+++G LF R + + L AG Sbjct: 4 RQLLYTLKIAEEKNFSRAADKLHIAQPSLSQQLSKLEQELGVKLFQRNTSTVELTYAGAS 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFD-QLISLGDKYEGVTAQ 124 + ++ + E+ + + R+ +V+G + + L + Y + Sbjct: 64 FIAHAQKIMDAVAQLRQEMDDISQLRAGRVVVGSMPITGSHLLPYVLPAFKASYPNIQVT 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTIS----ELPPLRLGFLVSRRYE 180 +E + + + D + + E + +PP E Sbjct: 124 LLEDTSLNLEKLTAEGGTDLSLLSLPLLEPTLSYEPIGEEIIDLAVPPDHPLTKTPGVLE 183 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + E + L+ P++ ++ F M R G P +++ + S V G Sbjct: 184 QGVEMKQLENEPFIVLK--KGQGFRKMTADLCREAGFEPNVVFESNNIETVQSLVAAGMG 241 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 +T++P F R + + P + + + R RY + + E Sbjct: 242 ITLVPRFIARAKRSELIPAYLPLAAPAPSRTLVIAYRKGRYLSKAAEAFIE 292 >UniRef50_A8SQI2 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SQI2_9FIRM Length = 298 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 61/294 (20%), Positives = 122/294 (41%), Gaps = 11/294 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + M F+ +A+ NI++AAE++H++ P + + LEE++G LFTR + + L Sbjct: 1 MDI---RDMNYFLQIAEYENISKAAEELHISQPPLSRQLRKLEEELGVELFTRDNGRLQL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLIS-LGDKY 118 +AG ++ V + +++ +I IG T + ++ + Y Sbjct: 58 TEAGHFFRERAQEVISLVDKTRSQMAERYNGAGGKIRIGTIETLSAEKLPKWVAGFHEIY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTI-SELPPLRLGFLVSR 177 VT Q V + +I + LD I + V+++ E L + + + +S+ Sbjct: 118 PDVTYQIVNNNSEEIIRMVDKGLLDMGIVREPVNSQYYERVRLQEDTWIAYIPNRNPLSQ 177 Query: 178 RYEERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + E EL L++ P + +R E I G P ++ S + +S V Sbjct: 178 KNRTTIEIELADLRDEPLI---LPSRGIHEKQIKTWFEMIGAEPKVVCWYSSLVNGVSLV 234 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + G + P A +++ + + + M + H + + + I Sbjct: 235 KNGIGTMLCPKSAQSILDYSCAAVKEIVNPTMTTGSVIVWKNFHNLSESARKFI 288 >UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=Bacillales RepID=B7IPY3_BACC2 Length = 300 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 11/251 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ +++ F +A+ ++ +AAE++H+ K+IA LE+ +G LF R+ I+L Sbjct: 1 MELL---QLKYFQTVARLEHMTKAAEELHIAQPSLSKTIARLEKDLGVPLFDRQGRQITL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG 120 N G+ +++ ++ LS + EI + + I + + P I+ + L S ++ Sbjct: 58 NSFGKVFLKRVERIFHELSEGEREIKDLAELQQG-SITMAVSIPRILPELLGSFLREHPN 116 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V Q S + L + ++DF +S V E L E+ L R Sbjct: 117 VRFQQFLASTPSMKRQLENMEIDFCLSSVPVEGEEIVWEPLITEEI---FLVVPSGHRLS 173 Query: 181 ERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 R+ L +++ P++ M F + D + G P I + +++G Sbjct: 174 NRESIHLHEVKDEPFISM--NTGYGFRHLTDEFCKEAGFTPHIAFEVDEPTVISDLIKQG 231 Query: 239 HFLTVIPHFAW 249 + +P+ Sbjct: 232 LGIAFVPNLTL 242 >UniRef50_C6CYK3 Transcriptional regulator, LysR family n=3 Tax=Bacillales RepID=C6CYK3_PAESJ Length = 296 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 112/295 (37%), Gaps = 10/295 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R F+ +A+ I RAA+ ++M P + + +E+++G LF R ++L Sbjct: 1 MDI---RQLRYFLAIAKEGQITRAAKALNMEQPPLSRQLKLMEDELGVILFDRSGKGLTL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLISLGDKYE 119 AG+ L K + Q + +E+ + IG + +++ + Y Sbjct: 58 THAGELLRDKAEKLLQEFNETMHEVKELDAGLHGMLAIGSVVSCISLLPPPIEQFRRLYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 VT + E + + L R ++ I++ + + + ++ LP ++ + Sbjct: 118 NVTFKIWEGDHFILGNLLEKRDIELIVARLPFESTL-HTQPYSVLPLPSDPYVAVLPASW 176 Query: 180 -----EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + L ++P+L ++ + R G P +I S ++ Sbjct: 177 VKGPDKNTMLMSELADMPFLTLKTDKTIGMHHRVMIEARAHGFEPKVICECSSVAIIVAL 236 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V G TV P T+K + + +++ + + I Sbjct: 237 VAAGIGATVFPKSVMASFPLPTIKMLTISDADFQSEVGIIWLKDRYLSKSARNFI 291 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 98/246 (39%), Gaps = 6/246 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ F+ +A+ ++ +AAE++H+ S + I LEE++G LF +K N+ L GQ Sbjct: 4 RQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPVGQL 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQ 124 ++ + L EIH EI +G ++ + Q++ + + V + Sbjct: 64 FLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNVKFR 123 Query: 125 PVEFSENGVIDNLFDRQLDFI-ISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 + +I ++ ++D ISP E L EL + S Q Sbjct: 124 FRQGMYPSLIRDMVKGEIDLAFISPFPDEHEQVCGEVLLTEELFAI---LPPSHPLAGEQ 180 Query: 184 EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTV 243 E +L+Q + F + ++ + G P I + V G +++ Sbjct: 181 EIDLIQLKEDTFVMFSEGYSLRPIVWEACQEAGFTPKIGFEGEETETIRGLVAAGMGVSL 240 Query: 244 IPHFAW 249 +P A Sbjct: 241 LPEMAL 246 >UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I2X4_THIIN Length = 313 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 98/296 (33%), Gaps = 11/296 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + +R F+ +A+ + RAA+++H++ P + I ALE ++G LFTR + Sbjct: 1 MDL---RHLRYFVAVAEERHFTRAAQRLHVSQPPLSQQIQALETELGVPLFTRGRGGVQR 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYP--TIIFDQLISLGDK 117 AG L + + + GR + + +G + P ++ L Sbjct: 58 TAAGDALLPLARSILDAVEHAVAQTRQVGRGETGRLAVGFAGSMPFTDVMPRLLRDFRAA 117 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 + V E ID+L +LD L L + P L Sbjct: 118 WPQVALDLREQPSQSQIDDLLAHRLDLGFIRTTQLMHDPRLSTLVVQREP-LLAALHADH 176 Query: 178 RYEERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 R L L++ P++ A A G NP I + I + Sbjct: 177 PLAARASLRLNDLRDQPFVIYSASLGAGLRQQTLALCAQAGFNPHIAQEVHEMPTLIGLI 236 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 G + ++ R P + E L R + IA+ Sbjct: 237 SAGLGVGIVAASMQRAQLP--WVAYRPLADVQASTEVLLVWRRDDPQPPLRNFIAQ 290 >UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 Tax=Bacteria RepID=A7ZAT2_BACA2 Length = 302 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 117/295 (39%), Gaps = 16/295 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++ F+ +A++N+ +A+E +H++ K + +LEE++ L R I+L Sbjct: 1 MDI---RQITYFLEVAKSNSFTKASENLHLSQPALSKMVKSLEEELKVELIDRSARQIAL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKY 118 AG+ ++++ + + + + +++ + ++ IGI + F ++I Y Sbjct: 58 TDAGEIVFEQGQMIMKSIDDLSTNLYDLLHLKKGKVKIGIPPLIGVLFFPKIIRGFKQLY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + +E N V + D LD + + V + E I L L V Sbjct: 118 PDVNIKLIEHGGNKVKQEVEDGVLDLGVVIEPV-----DEEQFDIIPLLNEELMLFVHSA 172 Query: 179 YE----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + E E + L+ P++ F + I G P I+Y + Sbjct: 173 HPLVHKEIVEMQDLKNEPFI--LFSEDFSLHDRIIQECIRAGFRPNIVYESSQWDFISEM 230 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + +++ P + + + +K + + + + + + + + I Sbjct: 231 IGEELGISIFPQSIVKKTDQSLVKAISIVNPSIPWKVAIILKKGKYVSHAVREFI 285 >UniRef50_Q74DH4 Transcriptional regulator, LysR family n=1 Tax=Geobacter sulfurreducens RepID=Q74DH4_GEOSL Length = 302 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 105/293 (35%), Gaps = 9/293 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F A+ N RAA ++H++ + I LE ++G LFTR+ + L AG++ Sbjct: 4 RHLRYFAATAEELNFTRAANRLHISQPAVSRLIKELECELGAQLFTRERFGLRLTAAGEK 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNT-YPTIIFDQLISLGDKYEGVTAQP 125 V Q + +G +++ IG +T + + D L+ L + + Sbjct: 64 FLFYARRVLQDCEEGIRAVRENGLNHQKLTIGFISTAMESFLSDALVRLSQERPDIDVTV 123 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 E S I L RQ+D E E + E+P L ++ R+ Sbjct: 124 NEMSPGDQIAALRYRQIDLGFIGNPHDGAGDEFELYVLREVP---LVAVLPVRHRLAGRS 180 Query: 186 EL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 E+ L+ ++ +I G P + S + + + G + Sbjct: 181 EICIGELEGDTFIGYLEDKFPGRNRVISTACARAGFRPKFELKAGSLIEVLGMIGTGKGV 240 Query: 242 TVIPHFAWRLVNP-ATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 ++P L +P P P+ + + ++ +A D Sbjct: 241 CLMPSDVAGLPHPNVAFIPLRDPLDPVRLAAAWLPGNTNPALHQLIAILAADC 293 >UniRef50_Q7N4W1 Hca operon transcriptional activator n=2 Tax=Photorhabdus RepID=Q7N4W1_PHOLL Length = 294 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 100/273 (36%), Gaps = 4/273 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R FI +A+ N +AA+K+H + I LE+ IG TL R +SL KAG+ Sbjct: 4 RHLRYFIAVAEELNFTKAAKKLHTAQPSLSQQIKDLEDYIGSTLLERNKRRVSLTKAGEV 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQP 125 Q+ + + + + + IG + + ++I + G + Sbjct: 64 FLQQARLILENAEKAKKMARRAAQEQIVLTIGFVPSAEVKVLPEVIPIFRLAHPGAKVEL 123 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 + G + L +D + + + + + L L + RY E+ Sbjct: 124 ISLFNPGQEEKLLQGDIDVAFMRPPIKSDSIDFKVILNEPLVVL-MPANHRLRYCEKISV 182 Query: 186 ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIP 245 LQ ++ + +I+ + P II + + ++ V ++P Sbjct: 183 NDLQGENFITPDPTQSGVLQQIIENYFTEHNVVPNIIQTANNMLLILNMVSLNLGCAIVP 242 Query: 246 HFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRN 278 + ++ A + + + P E + + R Sbjct: 243 FYITSIMTDAVICRPLSGYSPTI--ELIMAWRK 273 >UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putative n=1 Tax=Ricinus communis RepID=B9TDR3_RICCO Length = 301 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 97/262 (37%), Gaps = 9/262 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M I K+++ F+ +A+ + +RAAE++H++ P + I LE ++G LF R L Sbjct: 1 MSI-DLKQLKYFLAVAEEKSFSRAAERLHISQPPLSQQIMKLESELGVKLFARTTRTFEL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLI-SLGDKY 118 AG+ L + + R+ + I R + +GI + L+ K+ Sbjct: 60 TVAGKALMSEAADLLARMRMTIDTIRQIDRGEVGRLRVGIVGSAMWGPIPSLLEEFQTKF 119 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 VT E + L +Q+D + + EL + Sbjct: 120 PRVTWTLHEMGPTLQYEALRAKQVDVGFWREPRIDDDVLKNDNLRQELCFREDVCVAINE 179 Query: 179 Y-----EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 + +E E + E P L + +++F + G PTI ++ Sbjct: 180 HHPLAKQEAIELMDIAEEPMLTLALD-KSSFPRYLMQCCVQAGFQPTIAQEATEPQTLLA 238 Query: 234 AVERGHFLTVIPHFAWRLVNPA 255 V G + ++P R+ P Sbjct: 239 MVGAGLGVALMPETTSRIGWPG 260 >UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R3Z8_MYCS2 Length = 289 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 103/276 (37%), Gaps = 9/276 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F++LA+ + RAA+++H+ + I +E ++G LF R +SL +AGQ Sbjct: 2 RHLRCFVVLAEELHFGRAAQRLHVAQPALSQLIQRVERELGAQLFLRTRRTVSLTEAGQT 61 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLISLGDK-YEGVTAQ 124 L + + + + + R + + IG + + +L++ + + GV+ + Sbjct: 62 LLPEARRILRDADRVTQAVRAVHRGETGSVTIGFVGSAADDVLPRLVAAHRRHHPGVSIR 121 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E + ++ L D+++ + + L L L S + Sbjct: 122 LEEGTTAQQLEWLRDQRITVGLGRTPIDDPAVSTVVLARESLV---LAVPDSHALSGAES 178 Query: 185 QEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 EL L E P++ +I + G P+++Y + V G + Sbjct: 179 AELAGLAEEPFIMFPRHLGPGLYDIIHSACAAAGFTPSVVYETVRMQTIVGLVSGGLGVA 238 Query: 243 VIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRN 278 ++P L A P E RN Sbjct: 239 LVPESVRNLGRKGVRYVHLADAPPAI--ELSMMWRN 272 >UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter formigenes RepID=C3X7G6_OXAFO Length = 291 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 104/247 (42%), Gaps = 5/247 (2%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R F +A+ I+RAA+++H+ P + LEE++G L R ++SL Sbjct: 1 MDI---RQLRYFCAIAEEGQISRAAQRLHIAQPPLSYQLKLLEEELGVKLIDRNTRSLSL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTI-IFDQLISLGDKY 118 KAG YQ+ + + E + + + IG I I +++ +Y Sbjct: 58 TKAGLAFYQRAEQILGLMKVAAIEARDVEYGVNGVLTIGSPPAIGNIYIPERIKRFHQEY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V Q E + +++ L ++F I+ V E + L + Sbjct: 118 PHVRFQWREGNTYRILELLNADMIEFGIARLPVPMGSYESKPLLTESWMAVSRNDDPKWI 177 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 ++ E L+ +P + M+ Q + M+ M+ G+N + + A +S VE Sbjct: 178 GKDNIGLEELEGIPLILMQRQAGIHCHDMVIDEMKNKGVNADVFCESDNISAILSLVEAE 237 Query: 239 HFLTVIP 245 + ++P Sbjct: 238 LGIAILP 244 >UniRef50_Q13PS6 Transcriptional regulator, LysR family n=36 Tax=Proteobacteria RepID=Q13PS6_BURXL Length = 316 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 119/292 (40%), Gaps = 8/292 (2%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 ++ FI ++Q + A +I +T S + LEE++G+ LF R + +LN AG+E Sbjct: 27 LKTFIAVSQYGTFSGAGARIGLTQSAVSAQMQRLEEELGFALFDRTGRSATLNDAGRETL 86 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRSREIVIG-IDNTYPTIIFDQLISLGDKYEGVTAQPVE 127 + + + +E S + +G I + + + D L D G + V Sbjct: 87 ALAEEMMTLYARL-SERGAVAAESGMLRVGAIASAQVSFLADALARFRDDRPGWRIRVVP 145 Query: 128 FSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLG--FLVSRRYEERQEQ 185 G++ + +LD + + A ELE T+ P + L LV + R + Sbjct: 146 GVSLGLLGQVDSGELDLAVIIKPPFALPSELEWRTLVTEPFVLLVPKALVRGKGNARSWR 205 Query: 186 ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIP 245 ELL+ P++ R+ + ++D +R +N + + V RG + +IP Sbjct: 206 ELLRSEPFI--RYDRTSFGGRLVDRFLRRSRLNVHDVIELDELQGIVQLVARGIGVALIP 263 Query: 246 HFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 A PA + + Q + ++ R++ + + D GT+ Sbjct: 264 DSAGLGKWPAGVAALELGE--ATFQREIGLVQRPRHSRQAVAGVLADCIGTA 313 >UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax=Proteobacteria RepID=A0AYH9_BURCH Length = 326 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 111/291 (38%), Gaps = 6/291 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A+ N RAAE++H+ P + I LEE +G LF R + L AG+ Sbjct: 25 RHLRYFVAVAEERNFTRAAERLHIAQPPLSRQIQQLEEALGVPLFERTARPLKLTDAGRF 84 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIG-IDNTYPTIIFDQLISLGDKYEGVTAQP 125 Y + + + +++ G+ R + +G + +T ++ + +Y V Sbjct: 85 FYSHAVQLLAQTTELESMTKRVGKIERSMSVGFVGSTLYGMLPKIIRRFRSEYPAVELSL 144 Query: 126 VEFSENGVIDNLFDRQLDFIISP-QHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E S I L + ++D +H V+ + + L +G ++ Sbjct: 145 HEMSTMDQIKALKEGRIDVGFGRIRHEDPSVRRVVLREERMIVALPVGHVLDSAKPVLSL 204 Query: 185 QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVI 244 +L+ + + R ++ + A + P IY + V G ++V+ Sbjct: 205 HDLVNDT-LIIFPKAPRPSYADQVLAAFHDRALQPRRIYETRELQIALGLVAMGEGVSVV 263 Query: 245 PHFAWRLV-NPATLKYFDAPH--RPMYMQEYLYSIRNHRYTATMLQHIAED 292 P + L + + K D P+ P+ M + L + D Sbjct: 264 PQSVYGLKRDDISYKPLDDPNLVSPIIMSMRMLDESEDIRAMQALIYRLYD 314 >UniRef50_C6PVA1 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PVA1_9CLOT Length = 308 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 114/290 (39%), Gaps = 9/290 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI K+++ F+ +A+ + A++K+H+ P + LE +IG L R L Sbjct: 1 MDI---KQLKYFLTIAREGTLTNASKKLHIAQPPLSYQLKMLENEIGIKLIERTTRKSQL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 AG+ LY + + + + E+ + + + IG + +I+ +++ Y Sbjct: 58 TDAGKFLYNRSEKIVELVETTLKELKDFNKGIEGTLAIGTIASTASILPEKINDFHKLYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V Q E + ++D L + + I ++ + ++L+ + +S Sbjct: 118 KVNFQIREGNSTRILDLLNNGIIQIGIIRCPFDSKNLKYKSLSKEHMLAAIHSNFLSSTK 177 Query: 180 EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 +++ L+ LP + F++MI P I + ++ G Sbjct: 178 KKKISLIELKNLPLII-----HVRFKSMIVDACSGLNFTPNIFCETDDVRSMLTWATTGM 232 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + ++P L+ L Y + + + + +L + N + TM + Sbjct: 233 GIAIVPKSTVNLIPNINLTYKEITNPNLVTETFLVWLNNSYMSNTMKNFL 282 >UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=Actinomycetales RepID=C7PVI0_CATAD Length = 297 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 103/274 (37%), Gaps = 8/274 (2%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R FI +A+T + RAAE +H+T + I ALE ++G LF R NI+L AG+ L Sbjct: 5 QLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELGADLFLRARGNITLTDAGEAL 64 Query: 68 YQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPT-IIFDQLISLGDKYEGVTAQP 125 + A E+ R + +G + T ++ D L + +Y G+ Sbjct: 65 LPMARRILADADAARREVQELAELRRGHVRLGATPSLCTGLLPDVLRTYHRRYPGIQLLV 124 Query: 126 VEFSENGVIDNLFDRQLDFIIS--PQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 E + ++ +L LD + P + E L +L + L + Sbjct: 125 QESGSHDLVRDLARGALDLALVVLPLPSPSPALTTEELLREDLVVVSAPNLPPPGDGRQV 184 Query: 184 EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTV 243 L+ + R + + + A R G P A + G + + Sbjct: 185 RIADLEHEQLIMFR--HGYDLRDLTVAACRAQGFEPVFAIEGGEMDAVLGFARAGLGVAI 242 Query: 244 IPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIR 277 +P + V+P+ AP P + + R Sbjct: 243 VPSMVAQNVDPSLRVTPIAP--PALHRTIALAHR 274 >UniRef50_C9PA71 Transcriptional regulators LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PA71_VIBFU Length = 298 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 108/254 (42%), Gaps = 13/254 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I K++ F+ +AQ + + AE+ ++ + + I ALE ++G TL R + + L Sbjct: 1 MNI---KQLEYFLSVAQLKSFTKTAEQFFISQTAISQQIKALEHELGVTLLHRNNRIVEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP-TIIFDQLISLGDKY 118 AG+ Y + + A + N+ + +G + T++ D L K Sbjct: 58 TAAGEVFYSDAKNIINNIHASKERVANAAMGIQGSLNVGFLPMHGDTLLADILGDFYKKN 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + + + + LFD QLD I + + ++ ++ LPP+ L +V++ Sbjct: 118 PLIEINIADDNITQLYKALFDGQLDVIFTIDY---ELENYPSIDYLNLPPIPLYAVVNKT 174 Query: 179 YEERQ----EQELLQELPWLQMRFQNRANFE-AMIDANMRPCGINPTIIYRPYSFMAKIS 233 + +LL E ++ + + N + + P I ++ SF A + Sbjct: 175 HRLSNLKSLPIDLLSEEAFIVISYSNNLPYGVDRLIKICDSGQFVPKIKHKVPSFEAALV 234 Query: 234 AVERGHFLTVIPHF 247 VE G + V+P++ Sbjct: 235 MVEAGLGVAVLPNY 248 >UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F7Y4_SORC5 Length = 327 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 108/294 (36%), Gaps = 14/294 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + +R F +A+ + RAA+++ + P + I LE ++G++LF R + L Sbjct: 1 MDL---RHLRYFTAVAEERHFGRAAQRLGIAQPPLSRQIQDLESELGFSLFDRSRRRVEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGIDNTYPTIIFDQLIS-LGDKY 118 AG L + V+ L +E + + +V+G ++ +L+ + Sbjct: 58 TPAGAVLLAHVRRVFDALELAVHEARRASVGETGRLVVGYLSSLAYSGITELVRTFRGEL 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V E I+ L D ++D + E + PL + Sbjct: 118 PAVELALREMPPQEQIEALKDGRIDVGFVRAPLHDARLASECVRRE---PLLVALPADHP 174 Query: 179 YEERQEQ--ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 R+ ELL P++ Q + F ++ R G +P I +S V Sbjct: 175 LAARKRIPLELLSREPFVVFPRQRGSAFFDLVMGLCRAAGFSPRIAQEALHLD-ILSLVA 233 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 G ++++P + P + L + R + T+ Q ++ Sbjct: 234 AGFGVSILPESIKNVGRKG---LALRPIVGAPSTDLLVAWRADDASPTLRQFLS 284 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 99/245 (40%), Gaps = 4/245 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 ++++ F+ +A+ ++ +AAE++H+ S + I LE+++G LF +K N+ L GQ Sbjct: 4 RQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAVGQL 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 ++ + + L +E+H EI +G N+ + +++ Y V + Sbjct: 64 FCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNVKFR 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 + + +I ++ ++D Q N+ ++E L E+ + Sbjct: 124 FRQGTYPTLIRDVVSGEVDLAFISPFPENHDQVTGNVVLTEDLVAILPPGHPLAGEQSIK 183 Query: 185 QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVI 244 L++ ++ F + ++ G P I + V G ++++ Sbjct: 184 LSQLKDEKFI--LFSKGYSLRPIVWHACLEAGFTPKIAFEGEETDTIRGLVAAGMGVSLL 241 Query: 245 PHFAW 249 P A Sbjct: 242 PEMAL 246 >UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYT0_RUBXD Length = 293 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 106/288 (36%), Gaps = 6/288 (2%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 +R F+ A+ + RAA ++H+T K +A LE ++G LF R + L +AG+ Sbjct: 5 HIRYFVAAAEELHFGRAARRLHVTQPSLSKRVAGLERELGVRLFHRTRREVRLTEAGEIF 64 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRS-REIVIG-IDNTYPTIIFDQLISLGDKYEGVTAQP 125 + V + E +GR + IG ++ + L +++ V Sbjct: 65 LEGARRVLEDALRAAEEARKAGRGELGRLEIGFFSPAIYGVLPEILKEYHERFPEVRVTL 124 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELP-PLRLGFLVSRRYEERQE 184 E++ + ++ + + +++ V E++ + + L G +RR E Sbjct: 125 HEWTSSVQLERMREGKIEIGFMRAPVEEAGFVTEHVFVEPVVAALPEGHPQARR--EVVS 182 Query: 185 QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVI 244 L + P++ + N + + G +P I + A + V G + + Sbjct: 183 PRELADEPFIMVPRSKEPNSFDRYVSICQRAGFSPKITQEVFEIHAIVGLVATGMGVAFV 242 Query: 245 PHFAWRLVNPATL-KYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 L P + + D P + S R T L+ + Sbjct: 243 QGSVANLKRPGVVYRPLDDPEARIGTAIVRRSSRPSPVLRTFLETLQA 290 >UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=Actinobacteria (class) RepID=A4F7Y9_SACEN Length = 333 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 101/290 (34%), Gaps = 14/290 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A+ ++ RAA ++H+ P + LE ++G L R L AG+ Sbjct: 4 RHLRYFVAIAEEQSLTRAAARLHIAQPPLSAQLRKLETELGAVLVHRTARGTQLTDAGRV 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 L ++ + + +G R + +G + ++ ++ +Y V + Sbjct: 64 LLEEARRILHEVDHAAQMTREAGSGRVGRLSLGFIPSASNVVLPPILRQFKARYPEVRLR 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E + +++ L DR++D + + +L + + L + + Sbjct: 124 LREMRPDEIVERLHDRRIDAGFFYLPI-----DDPSLHVRSVADDSLVLALPSTHPLADS 178 Query: 185 QEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIY-RPYSFMAKISAVERGH 239 E+ + P++ + + G P ++ + + V G Sbjct: 179 PEVDLRAVAGEPFILPPRYDMPGLYTSVTQACERAGFTPRVVQPDVWLMQTIVGLVAGGM 238 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + V+P ++ A + + + + R T + + Sbjct: 239 GIAVVPSSVQQI-PRAGATFVPLTDVSATARMAM-AWRREIGTPVLRSFL 286 >UniRef50_A5VFC0 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A5VFC0_SPHWW Length = 315 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 109/304 (35%), Gaps = 12/304 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + +R F+ +A + RAA+++ ++ P K I ALE+++G LF R + L Sbjct: 12 MDL---RHLRYFLRVADEMHFGRAAQRLGISQPPLSKQIRALEDELGVKLFDRTSRRVRL 68 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIH-NSGRRSREIVIGIDNTYP--TIIFDQLISLGDK 117 +AG+ + ++ + +G + P + L Sbjct: 69 TEAGRLFEPEARRALEQADRAARIARLAHSAEIGRLGLGFTTSGPFIPFVARALHRFRRT 128 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 Y V E + I+ + RQLD I + + + + + + L Sbjct: 129 YPDVELILREQGRDEQIEGVLSRQLDIGIVRDYRTPVLPDGVVAQCLQQEEMILAVRDDH 188 Query: 178 RYEERQEQE---LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 R + L++ P + N F A G P I + S + Sbjct: 189 WLARRPQPPRIADLRDEPLVLYGPPNGTGFTEHFFALCEEAGFVPKIAHEARSLATLLGL 248 Query: 235 VERGHFLTVIPHFAWRL-VNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 V G T+I RL V+ + F AP P + ++ A + I E+R Sbjct: 249 VSAGFGPTIIAQSMARLHVDNVVNRSFAAPS-PSSLW-LVHGEELSPTGAAFRRTILEER 306 Query: 294 DGTS 297 DG + Sbjct: 307 DGEA 310 >UniRef50_Q632J2 Transcriptional regulator, LysR family n=5 Tax=Bacillales RepID=Q632J2_BACCZ Length = 297 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 112/293 (38%), Gaps = 13/293 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++R FI + + I+ AAE++H++ P + + A+E+++G L R + + Sbjct: 1 MDM---RQLRYFIAIVEERKISAAAERLHISQPPLSQHLKAMEDELGTKLMERNGKFLGV 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG+ LY+ + + E+ G S ++ IGI+ + + D L +Y Sbjct: 58 TEAGKALYKYALQMNHLMEEAKMEVKEVGNGVSGKLTIGINTFSVSGLPDLLHRFHKEYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 VT + + + + + +R ++ I + +L + + L F+ S Sbjct: 118 RVTYKVHQNESSHLCQLVRERVIEMAIIRLPL-----DLNDFSAIHLYTEPFYFITSNEK 172 Query: 180 EERQEQELLQEL---PWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + Q L ++ P + + MI ++P II + V Sbjct: 173 QLFNHQVTLADIQNHPLI-LPSTEGLGVHYMILEAFSKAQLHPNIIAECSDISLLLDLVA 231 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 ++P ++ F + L ++NH + I Sbjct: 232 CNFGAAIVPETVINQYQNYNIQAFKITDTDLIASTSLIWLKNHYLSKAAQNFI 284 >UniRef50_A1K5Q5 Transcriptional regulator, LysR family n=4 Tax=Betaproteobacteria RepID=A1K5Q5_AZOSB Length = 295 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 106/294 (36%), Gaps = 22/294 (7%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 MR F+ +A+T N RAAE++H+ P I LE ++G LF R + L AG+ Sbjct: 1 MRYFVAVAETLNFTRAAERLHIGQPPLSMQIRDLETEVGARLFERSRRKVELTDAGERFL 60 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP--TIIFDQLISLGDKYEGVTAQP 125 + R E + E+ +GI ++ P I+ D L + ++ + Q Sbjct: 61 AHARAILARTEEAAEEARRAAAGEIGELRVGITSSLPYTAILPDALAAFRQRHPALRLQI 120 Query: 126 VEFSENGVIDNLFDRQLDFI-------ISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 E D L +LD ++P H+ R + L + L S Sbjct: 121 HEMFTAEQFDALAQDRLDVGLVRFDATLAPPHIRVREIGRDALRVVVHAEHPLAAKASVS 180 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + E L++ ++ A++D R G P ++ +I V G Sbjct: 181 FAE------LRDADFISFPADAGTELPAILDRLCRGAGFEPRVVQLAREATTQIGLVAAG 234 Query: 239 HFLTVIPHF--AWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 + ++P R+ L DA + HR A + +A Sbjct: 235 LGIALLPAPLECVRMPRVRYLPVKDAGAD----FPLAVACHAHRTRAVTDRFLA 284 >UniRef50_UPI00016C47B2 transcriptional regulator, LysR family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C47B2 Length = 291 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 106/288 (36%), Gaps = 13/288 (4%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQ---IGYTLFTRKDNNISLNKAG 64 ++R F+ +A+T + RAAE+ +T + I LE + +G LF R + L AG Sbjct: 5 QLRYFVAVAETGSFTRAAEREDVTQPTLSEQIMRLESKPHGVGRRLFDRLGRKVVLTDAG 64 Query: 65 QELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFD-QLISLGDKYEGVTA 123 +EL + + + + +S + +G T + + + V Sbjct: 65 RELLGHAQGILAAVKEAERAVRDSAE-GGSLRVGAIPTIAPFLLPGTVTRFRKDHPNVQL 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 Q E ++ +L +LD + V +E L PL + + Sbjct: 124 QLKEDLTERLLADLLAGELDVALMAMPVRDDRLHVEKLFAE---PLVMALPAKHELASKT 180 Query: 184 EQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 E +L + E P++ + + F + + G+ P ++ R + ++ V G + Sbjct: 181 EVKLADVLEEPFILL--DDMHCFGDQVLSLCHRGGLEPRVVCRGEQIVTLLAMVAAGQGV 238 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 +++P A Y +P ++ R+ L+ + Sbjct: 239 SIVPEMAATADTSKQCAYRPL-GKPTPVRTLCAVWHKQRFRPPSLRAL 285 >UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q0Q6_PROST Length = 295 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 119/293 (40%), Gaps = 16/293 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + +R F+ + Q N +RAAE++ +T +SI LE+++GYTL R+++ + L Sbjct: 1 MDI---RSLRYFVEVVQLNGFSRAAERLFVTQPAISRSIQKLEQELGYTLLVRENDGVRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYP-TIIFDQLISLGDKY 118 G+ L + ++ ++++ + G S + +G+ T D +++ +Y Sbjct: 58 TDEGEILLSHAKQILKQFNSMNKALKEKEGPLSGILNVGLPPVIASTYFADIIMAFSRRY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + +E + +++ + + +++ + +L + RL LVS + Sbjct: 118 PQVELKILELGTHKMMEAMLNGEVETAAVMLPFDNELFDLHVFS-----SDRLMLLVSEQ 172 Query: 179 YEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + L + P++ R N ++ + G P I R + Sbjct: 173 HPLAMRNSVKFAELIDEPFIFFSEDFRIN--ELVMSACGIYGKKPVIAGRSSHLDLVTAM 230 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 V G +T++P W L + + L +++N + Sbjct: 231 VRAGVGVTLLPDSMWNKTRADGLSIIPVIEPVLSYEVALATLKNSHQSRRAKA 283 >UniRef50_A1S338 Transcriptional regulator, LysR family n=16 Tax=Shewanella RepID=A1S338_SHEAM Length = 302 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 117/300 (39%), Gaps = 15/300 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I I K + F+ LA+T + RAAEK+H+T K + LE+ L R + +SL Sbjct: 1 MNIPI-KNLHCFVTLAETGSFTRAAEKLHLTQPTLSKMLQRLEDHWQQQLIIRNNQKLSL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG+ L + + + ++ ++ N G + + +G+ +++ + L + +Y Sbjct: 60 TQAGELLLEHAREMLGQWHLLEEDLSNLRGVQRGYLRLGVCPMMSSLVIELLTAFRARYP 119 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 GV + E+ G L LD + + + LT L L + + Sbjct: 120 GVRLEMFEYGGFGCEKALLANNLDIAFTALPAT----HADELTAQPLTAYPLLACLPAGH 175 Query: 180 EERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + + L P++ + ++D+ R G+ + YR + S V Sbjct: 176 KLANKAALDWCDFGSHPFIM--YNQDFALAKLLDSLARNAGVELNVAYRSGQWDFLASMV 233 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRY-TATMLQHIAEDRD 294 E L ++P + L + + + R+H + T +A RD Sbjct: 234 EANMGLAILPAPICEKLTDKALCFRPLSGG--HTWDLALIWRSHLHLTPAAAAFLALSRD 291 >UniRef50_D2P368 Transcription activator of glutamate synthase operon GltC n=18 Tax=Listeria RepID=D2P368_LISMO Length = 295 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 100/247 (40%), Gaps = 12/247 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 ++++ F+ +A+ ++ +A+E +H+ S + I LEE++G LF R N+ L GQ+ Sbjct: 4 RQLKYFMEVARVEHMTKASENLHVAQSAVSRQITKLEEELGVHLFDRVGRNMQLTSVGQD 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 ++ L + + + + +G+ N+ T + +IS +KY +T Q Sbjct: 64 FLKQAAIALNELQKAEALVTEYTDPAKGTVRVGLPNSLSTKVLPSVISTFREKYPQITYQ 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ- 183 +E + + + L LD +S + E + +L +V + + + Sbjct: 124 FMEGTNEELTEMLLSGVLDMTF----LSPVPESSEQIEAIRFFDEKLKLIVPKTHPLAEN 179 Query: 184 ---EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + L ++ + + ++ G P I ++ F V G Sbjct: 180 FTVSLKELASEKFV--LYPEDFDLYKIVTKAANKKGFEPQIAFQSRDFYTIQGLVGAGLG 237 Query: 241 LTVIPHF 247 ++++P Sbjct: 238 ISILPEM 244 >UniRef50_C8PWL4 Transcriptional regulator, LysR family n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWL4_9GAMM Length = 299 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 115/285 (40%), Gaps = 14/285 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRK----DNNI 58 + K+++ FI + +T + AA+ + +T K+I+ LE+ +G LF ++ NI Sbjct: 1 MMTLKQLQCFITVVKTGGFSHAADTLSLTQPTVTKAISNLEDTLGVALFDKQLMSRKRNI 60 Query: 59 SLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDK 117 +L + G +Y++ V Q + ++ + ++ +G+ ++ D + Sbjct: 61 ALTEIGALVYEQAQTVLQHVGYLEQTVTQYQHMDRGQLRLGLSPLGGELLSDAIFEFYQT 120 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 + + +E + L D LD Q + E+ + + + R Sbjct: 121 HRHIELSLLEDGAESLKQALLDDTLDVCTLMQPIE------EDFDCIPVCDYPIMMVAHR 174 Query: 178 RY-EERQEQELLQELPWLQ-MRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 ++ +Q L+ L M F + ++F +MI + G P II + + + Sbjct: 175 QHMGNTIKQVTLKSLKNASLMLFASHSSFTSMIVEECQKLGFEPNIICHTNQWQLLTTLL 234 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHR 280 ++ +T++P + ++ L +P + + + R HR Sbjct: 235 KKNMGVTLLPKYYTDKLDDKQLVCLPL-VQPNLTWQMVMAWRKHR 278 >UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=Cyanobacteria RepID=Q3M2K4_ANAVT Length = 298 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 108/286 (37%), Gaps = 6/286 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKD-NNISLNKAGQ 65 + +R FI +A+ + ++AAE++H+ P + I LE ++G LF RK + L +AGQ Sbjct: 4 RHLRYFIAVAEELHFSKAAERLHIAQPPLSQQIQQLEAELGVELFQRKTKRQVQLTEAGQ 63 Query: 66 ELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTA 123 Q+ + ++ +LS + +GR ++ +G + + ++ +++ V Sbjct: 64 VFLQEAYQLFAQLSKAIDLTQRTGRGEKGQLRVGFTSLVTYDLLPVILRQFREQFLEVEL 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 E + LFDR++ + + E + L L R E Sbjct: 124 VLQELTTTQQEQALFDRRIHVGFAHPPLEDNTFNQECIHQEGLIVAMLVTHFLARQENIS 183 Query: 184 EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTV 243 +E L++ ++ I + + +P + I V G + + Sbjct: 184 VRE-LKDENFIMFPRYLGPGLYDQILSLCQQGNFSPKVTIEAIQMQTIIGLVSGGMGIAI 242 Query: 244 IPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 +P + A + Y + + E R T + + + Sbjct: 243 VPSSLQN-LQRAGVVYRTLDEKT-PLVETAVVWRQEDMTPVLREFL 286 >UniRef50_C6D9U9 Transcriptional regulator, LysR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6D9U9_PECCP Length = 294 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 48/290 (16%), Positives = 110/290 (37%), Gaps = 12/290 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R FI +A+ + RAA ++++ P + I +LE ++G LF R ++ L +AGQ Sbjct: 4 RHIRYFIAVAEELHFTRAAVRLNIGQPPLSQQIQSLEAELGVLLFERTRRSVRLTEAGQH 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNT--YPTIIFDQLISLGDKYEGVTA 123 + + + + +E+ R + E+ I +T + L + KY V Sbjct: 64 FLIRAREILESSEGVASELQRISRGEAGELKISFTSTGLLVEELRTPLRTFRAKYPEVRL 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 E + L +LD + + + LT+ + RL ++ + Sbjct: 124 TLKEMFTHLQFAALLAGELDIGCVRFN---GPRAPDGLTLRWIRNDRLCLVLPDDHPLAG 180 Query: 184 EQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 ++ +++ P++ + A+ + G P + M +I V G Sbjct: 181 RTDVGIVEVRDEPFIGYPAKAGASVSDYVTMCCEQAGFIPNVTQEAREAMTQIGLVAAGM 240 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + ++P + + P + + ++ L + R + + + Sbjct: 241 GVAILPQPMDQ-LQPKGVCFIPLSDAGAQLRMALVT-RESDNSPRVRNFV 288 >UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRZ3_ACIBL Length = 296 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 106/278 (38%), Gaps = 15/278 (5%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R F +A+ RA+E H+ + I LE ++G LF R + L G+ Sbjct: 5 QLRYFCAVARHGTFTRASEVEHVAQPSLSQQILKLEAELGARLFDRLPRSAKLTVFGKAF 64 Query: 68 YQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQP 125 + ++L E+ + E+ +GI T + +L++ L ++ VT + Sbjct: 65 LPNAERILRQLDEAKTELLEMTSNEKGEVTVGIIPTIAAYLLPKLLNGLSVRHPDVTVKI 124 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 E ++ L D +D I+ + L EL + ++ ++ Sbjct: 125 SEDITPVLLQRLHDGSIDMAIAALPIPGT-----ELASEELFEEKFYAVLPEKHRRASRA 179 Query: 186 EL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 + L P+L ++ F + A ++P++++ F ++ V G + Sbjct: 180 SISLADLNREPFLLLK--EGHCFRDSVIAACNQAAMSPSVVFESGQFATILAMVSAGMGV 237 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNH 279 + +P A + K+ + + + + R+H Sbjct: 238 SAVPAMAVQ--PHPGCKFIPISGKHSSRKVGIVTSRHH 273 >UniRef50_UPI0001745DD5 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DD5 Length = 290 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 103/279 (36%), Gaps = 14/279 (5%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R + +A+T N +RAA+ H++ + I LE+++G LF R + L +AG+ Sbjct: 5 QLRYMVAVARTGNFSRAAQTCHVSQPSLSQQIQKLEDELGERLFDRLRRHAKLTQAGERF 64 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQP 125 + + + + A E + I +G+ T + +LI + KY GV Sbjct: 65 LPRAVRILEEMDAATREARAANDLDQGRITVGVLPTIAPYLLPKLIAAFSAKYPGVQVVV 124 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE- 184 E + + + ++D I+ + + E + EL L + + + Sbjct: 125 HEDTTARLRELTAACEVDIAIASLPL-----QDERFEVRELFDEELLLALPNNHRLVDQK 179 Query: 185 ---QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 E L E ++ M+ + +P + R S V+ G + Sbjct: 180 KIIPEDLLEEKFILMK--EGHCLGDQVLHFCHRQDFHPQVSCRSAQMETVQSLVQSGMGI 237 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHR 280 T++P A + + + P + + R Sbjct: 238 TLVPRMALQEDRSVK-PVYRSLSDPSPKRTIVAFWPRQR 275 >UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MA3_RALEJ Length = 296 Score = 194 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 104/285 (36%), Gaps = 13/285 (4%) Query: 1 MDI-FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNIS 59 MDI + +R FI +A+ N RAAE++H+ P I LEE++ TL R ++ Sbjct: 1 MDIVMDLRHLRYFIAIAEELNFTRAAERLHIAQPPLSMQIRQLEEEMDVTLLNRTRRHVE 60 Query: 60 LNKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIG-IDNTYPTIIFDQLISLGDK 117 L +AG+ ++ + + + + R + + +G ++T T++ L + ++ Sbjct: 61 LTEAGRIFLEQARQILRATERAVVQAQRAHRGETGRLTVGFFEHTSYTLLPPILRAYRER 120 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 + V F + L D V +LE +T + V Sbjct: 121 FPSVEILLRWFPVVKQAEALRRGDADISFMR-----PVPDLEEVTWETILEEPFVLAVPA 175 Query: 178 RYE----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 R+ E + + P++ + +F AM G P +I + Sbjct: 176 RHPLANAESISLKKCAQEPFVMYIPEMAPDFHAMNMRMCASAGFVPKVISEVGQVYTLLG 235 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRN 278 V G + +P R V + Y R ++ L + Sbjct: 236 LVSSGAGIGFVPAS-VRKVKFDHVVYKPIEGRQPTIEIMLGYSQR 279 >UniRef50_C2FUK4 Transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2FUK4_9SPHI Length = 300 Score = 194 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 106/279 (37%), Gaps = 9/279 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + + F +LA+ + +AAE++ ++ P + I LEE++ LF R + ++L AG Sbjct: 4 RHLHYFAILAEELHFGKAAERLFISQPPLSRQIKDLEEELAVILFERNNKRVNLTPAGAY 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISL-GDKYEGVTAQ 124 ++ + + L + S +G ++ P + +L+ + ++Y + Sbjct: 64 FLKETQDILRLLDNAKIKARQIQDAVSGTFRLGYISSTPKALLARLLKMVKERYPHLHVC 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E S + L + +LD I + + + L+ F ++ + Sbjct: 124 LYETSTQKQLTALENGKLDLGIVRTPILSN-------QLCTRTLLKESFCLATTPDFNAN 176 Query: 185 QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVI 244 L EL ++ + + + G +P +++ + + + V G ++ Sbjct: 177 SGKLSELAYVTYSKEYAPEYYRQFVSYCHYLGFDPHVLHECNTMQSILELVASGLGAALV 236 Query: 245 PHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTA 283 P + + P P+Y + L R R+ A Sbjct: 237 PQSVQNQALHLQICFSALPAVPIYTETVLAFDRESRHPA 275 >UniRef50_C4DFU1 Transcriptional regulator, COG0583 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DFU1_9ACTO Length = 309 Score = 194 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 107/278 (38%), Gaps = 9/278 (3%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 +F ++R F+ +A+ ++ AA K+H +A LEE+IG L +R I L + Sbjct: 1 MFDENRLRVFVAVAREGSVTAAAAKLHYAQPSVSHHLARLEEEIGAPLVSRLGRGIRLTE 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIH-NSGRRSREIVI-GIDNTYPTIIFDQLISLGDKYEG 120 AG+ ++ + R+ A E+ ++G + + + ++ + D Y G Sbjct: 61 AGRLFAERAEEILGRIDAARTELASHAGLVNGHVRLAAFPTALAALVPSAAGAFADAYPG 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR--- 177 V E I L ++D ++ + + + E L+++ L + + S Sbjct: 121 VDVDLTEAEPPQAIAALRRGEVDICLAFHYGATPPADWEALSVAPLFDEPVYLVTSPGSS 180 Query: 178 RYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 R E + W+ Q A + + G P++ + ++A + V + Sbjct: 181 PSGPRDELASYADRRWIAGCAQ----CRAHLLSACEASGFTPSVAFETDDYVAVQALVAQ 236 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYS 275 G ++ +P A R ++ P + Y Sbjct: 237 GMGVSTLPGLALRAHRDERVRLDLLPDDRRTVVALTYG 274 >UniRef50_C0CW79 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW79_9CLOT Length = 306 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 116/302 (38%), Gaps = 28/302 (9%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ ++ + ++AQ ++ +AA K+ ++ I LEE++G LF R + Sbjct: 1 MEL---RQFKYVNMVAQCGSVTKAARKLFISQPALSSYINKLEEELGVKLFDRSATPLVC 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQ-LISLGDKY 118 AG++ ++ + +L +D E + + +G + L +++ Sbjct: 58 TYAGEQYLKRARAILMQLDDMDREFRDIATNCQGRLRLGFPGERLIYMLPLILPPFKERF 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRL-GFLVSR 177 G+ + N +I+ L + DF+ PQ + +T EL + G+L Sbjct: 118 PGIDVEVTSGPGNRLIEGLRNGDTDFVFLPQWSKDKDIAQVKMTDEELVLVCARGYLPDE 177 Query: 178 RYEERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 +R++ LP++ + + A +D + G+ P I +S M Sbjct: 178 CILDREKHIVNWRKAARLPFITL--EKGHALRASVDVLAKNAGVQPDIFLESHSNMLSCR 235 Query: 234 AVERGHFLTVIPHFAWRLV-------------NPATLKYFDAPHRPMYM---QEYLYSIR 277 +G + V+P LV NP T + F Y+ ++ L+ I Sbjct: 236 LAAKGMGVAVVPEITLELVKEGGELDVYHLSENPLTWEVFALHREGCYIGQVEQALFEIA 295 Query: 278 NH 279 H Sbjct: 296 EH 297 >UniRef50_Q3MEY8 Transcriptional regulator, LysR family n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3MEY8_ANAVT Length = 295 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 106/286 (37%), Gaps = 7/286 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ LA+ + +AAE++H+ P + I LE ++G+ LF R + L +AGQ Sbjct: 4 RHLRYFVTLAEELHFGKAAERLHIAQPPLSQQIRQLEIELGFDLFHRTKRTVRLTEAGQV 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 ++ + Q+L S R ++++G ++ I ++ V + Sbjct: 64 FLGEVQQILQQLQQAIQLGQTSSRGEVGQLIVGFVSSAAYNILPIILRNFRACTPAVKLE 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELEN-LTISELPPLRLGFLVSRRYEERQ 183 E + + ++ L + +D V + E S + L L++ ++ Sbjct: 124 LHEMTTDQQLEWLREGGIDIGFIRPPVEENIFNWETIFQESLMVALPETHLLANQFN--I 181 Query: 184 EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTV 243 L ++ + +I + + G +P + +S V + + Sbjct: 182 PLTSLGNESFILFPRKIAPGLYDLIISLCQQAGFSPHVAQEAIQMQTTVSLVAADMGIAI 241 Query: 244 IPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 +P + + Y + + R + + T+ + + Sbjct: 242 VPASLQN-LQRTGVVYKNIQEATA-KVALAMTWRKNETSPTLQRFL 285 >UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=Exiguobacterium RepID=C4L1Y9_EXISA Length = 294 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 116/277 (41%), Gaps = 8/277 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 ++M+ FI +A+ + RAAE +H+T K+I LE+++G LF R+ I L G+ Sbjct: 4 REMQYFIAVARAKSFTRAAEALHVTQPTLSKTIRHLEQELGVELFDRQRRQIELTDVGEA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 L + + ++L + N + + + + I +G+ ++ F + ++ Y + + Sbjct: 64 LMLESELLIRQLEDLPNHVFDITNSKRGLIRLGLPPLIGSLFFTKFLTVFHSSYPNIRVE 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E + + L +LD I + S+ +E +T L ++ R + E Sbjct: 124 ITEAGGHTLEHALEKGELDVIATVLPTSSTFEETPFVTEELYAYLPERHPLASRKQLLLE 183 Query: 185 QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVI 244 + L P++ F + + ++ G P +I + +V +G+ +T++ Sbjct: 184 E--LASEPFV--LFTDEFSLHHVVRTACEQAGFTPRLIGESGQWDFLCMSVAQGNAVTIL 239 Query: 245 PHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRY 281 P + +N +K R + + RY Sbjct: 240 PRSIMQEMNIYGVKAILLKQR--IPWQLGLATAKGRY 274 >UniRef50_B4SNU6 Transcriptional regulator, LysR family n=1 Tax=Stenotrophomonas maltophilia R551-3 RepID=B4SNU6_STRM5 Length = 310 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 105/275 (38%), Gaps = 11/275 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F++ AQ + +AAE +H+ P G+ I ALEE+IG LF R+ I L+ AG+ Sbjct: 4 RHLRYFVMTAQLQSFTKAAEALHIAQPPLGQQIRALEEEIGTPLFHRQGRGIVLSDAGRV 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPT--IIFDQLISLGDKYEGVTA 123 + + R+ + ++ R + +G+ + + L + V Sbjct: 64 FWAAAVDILARVDHAKEQALSAARGEVGTLTLGLTESASYNDAVTALLRRFRQAHPAVQL 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 Q VE +I L D +LD +I S + L I +L L ++ + Sbjct: 124 QLVEDGSESLIRRLDDGELDAVIVRPPYSHPGE----LVIQQLSAEPLVAVLPAEHPLAG 179 Query: 184 EQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 + L++ ++ ++ A + A R G PTI + I+ G Sbjct: 180 RAGIALTELRDERFILFSRKSGYGLSADVVAACRSQGFTPTIQQEAPQVASAINLAAAGL 239 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLY 274 + ++P L P P+ + Sbjct: 240 GIAIVPASMQTLHRPGLAFVALELGMPITALQLAM 274 >UniRef50_C6CDY7 Transcriptional regulator, LysR family n=10 Tax=Enterobacteriaceae RepID=C6CDY7_DICDC Length = 310 Score = 193 bits (490), Expect = 6e-48, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 104/286 (36%), Gaps = 5/286 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A + RAAE + ++ P + I LE +IG LF R + + +AG Sbjct: 4 RYLRYFVAVASARHFTRAAENLGISQPPLSQQIQKLEREIGTPLFKRMARGVEMTEAGAA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGID--NTYPTIIFDQLISLGDKYEGVTA 123 YQ + + +H+ R + I IG T+ ++ L + V Sbjct: 64 FYQDACHILALTDSAIERVHSIARGEAGAINIGFSCAVTFHPMVLSLLQRYRQHFPNVRL 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 P E ++D+L +R +D + + +E L L + Sbjct: 124 NPREEHIQDILDSLRNRTIDIAFIRLPCDLNDEFDGEILTNEAFQLVLPAGHPLSAQTCI 183 Query: 184 EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTV 243 + L++ P + + +I G P + A I+ V G +T Sbjct: 184 ALDQLKQEPLIIFPRELCPGLYDLIVRTCYLSGYQPKLNPLAPHLTATINMVATGFGVTF 243 Query: 244 IPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 +P + +++ Y D P + R H + T++ I Sbjct: 244 VPQSM-SCIQNSSVSYHDTTT-PHLTTQIAVIWRRHDRSVTLMHMI 287 >UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W9G9_BORPA Length = 296 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 102/297 (34%), Gaps = 10/297 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A+ + RAA ++ + P I LE +IG L R+ ++L +AG Sbjct: 4 RHLRYFVAVAEDLHFTRAAARLGIGQPPLSLQIQQLEREIGTPLLLRQPRGVALTEAGAR 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNT--YPTIIFDQLISLGDKYEGVTA 123 Q V G +I +G + + + + + D+Y GV Sbjct: 64 FLQDARAVLHAAELAVETARRLGHGEQGDIAVGFTASAVFHPYLPSAIRAYRDRYPGVRI 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 E + ++ L ++D + + + E P+ + ++ Sbjct: 124 ALSESNARALLAGLRSGEVDVAFVRPPYALDDEFASERVLDE--PMLVALPPDHPLCRKR 181 Query: 184 EQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 + L E ++ A I + G P +I + IS V G + Sbjct: 182 TVPVAALAEQDFVLYPRPIGAGLYDAIMQACQRAGFTPRVIQEAPQMASIISLVAAGVGI 241 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH 298 V+P A R + A + Y + R +A + H E G +H Sbjct: 242 AVVPA-AMRHMGAAGIVYRPIRG-DAPRALLDMAYRRQPRSAAVR-HAVELLRGRAH 295 >UniRef50_C9KL67 Transcriptional regulator, LysR family n=2 Tax=Veillonellaceae RepID=C9KL67_9FIRM Length = 302 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 10/264 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I K MR+F + + NI+ AA+++ + + + LE +G LF R I L Sbjct: 1 MEI---KDMRSFYAIVEEGNISHAAQRLDIAQPALSRQMKRLESSLGVQLFERGSRRIRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLI-SLGDKY 118 AG+ LY ++ + + EI G + I +G T ++ +LI +Y Sbjct: 58 TDAGRVLYSRVEHILGMVDGTVREITEIGSGVAGSIQLGTITTSGALLLPELITEFHRRY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 VT Q E +++ L +R ++ I+ V ++V E L L + + Sbjct: 118 PQVTYQIWEAEGARILELLDNRVIEIAITRTQVDSKVYESIVLPNEPLVVVMNKDQIIGA 177 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 ++ E L++ P + ++++ AN R G P I+ S + + V+ Sbjct: 178 SDKEVRMEELRDTPIII-----PLRWQSLFVANCRKLGFEPHIVCVSDSIVQDLLLVKMD 232 Query: 239 HFLTVIPHFAWRLVNPATLKYFDA 262 ++P + L+ L Y Sbjct: 233 MGAAILPVSSRTLLTDGNLYYKKL 256 >UniRef50_C3NNS3 LysR family regulatory protein CidR n=22 Tax=Vibrio RepID=C3NNS3_VIBCJ Length = 302 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 104/296 (35%), Gaps = 12/296 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + +R F+ L + +A+E++ +T K I LE+++ L R+ L Sbjct: 11 MDI---RALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWL 67 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG+ +YQ+ + ++ +D E+ + + + +GI + Y Sbjct: 68 TEAGEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVGHVYARLFRQYRQTYP 127 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR-R 178 V VE+ + + D +D ++ + + +L + + P + + R Sbjct: 128 NVELTVVEYGGRKIEQAILDGDIDVAVTMLSPN-QHPDLNTVALDHYPIFAVVPDIPLWR 186 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + + P+ F + I + G P + R + ++ V+ G Sbjct: 187 SLTTLTWAQISQEPF--YLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVALVKSG 244 Query: 239 HFLTVIPH-FAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 + +P R+ L Y P P RY + + Sbjct: 245 VGVCFLPAPLCQRIQGDGVLIY---PITPAIDWRLGVVWHRERYVSKTAEAWIALC 297 >UniRef50_C9XN81 LysR-family transcriptional regulator n=24 Tax=Firmicutes RepID=C9XN81_CLODC Length = 293 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 112/291 (38%), Gaps = 11/291 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+++ +R F+ LA + +AAE + +T +I+ LE ++G LF ++ NI L Sbjct: 1 MNLY---HLRYFVTLAHLEHYTKAAENLSITQPSLSHAISLLENELGVALFEKEGRNIVL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPT-IIFDQLISLGDKYE 119 K G+ + + + L + + +G +I + T T I D + Sbjct: 58 TKYGKIFLKDVEKSLEILDSSVKSLKITGTGEGQIDLAFLRTLGTDFIPDIVHKFLKSNP 117 Query: 120 G--VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 + + +I L +R+ D + + + +E + +++ L L S Sbjct: 118 AKSIDFKFHTGVTTDIIQGLKERKYDIAFCSK--LEKEKGIEFIPVAK-QDLVLIVPYSH 174 Query: 178 RYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + +L + +P+ Q+ F R+ +ID + P I+Y V + Sbjct: 175 PLAAKDTIDLKETIPYPQIVFNQRSGLRYIIDDMFKKINQQPNIVYEVEEDQVIAGLVAK 234 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 + V+P+ +++ +K H YL I++ + Sbjct: 235 NFGIAVVPNM--NMLSFTKVKVIQIIHPSWERNFYLAFIKDRYLPPAIKNF 283 >UniRef50_B8CTJ9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CTJ9_SHEPW Length = 295 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 113/283 (39%), Gaps = 14/283 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I I K + F+ L + N RAAEK+H+T K I LEE +G L R + + Sbjct: 1 MNIQI-KNLHCFVTLVEMGNYTRAAEKLHLTQPTLTKMIQRLEENLGQPLLIRNNQKVIA 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG+ L + + + ++++ +G ++ ++ +G+ +I + + KY Sbjct: 60 TEAGRALICTSQQIVGQWHRLREDLNSLNGLQTGQLRLGVCPMMGEMIIELVAQFRKKYP 119 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 GV E G L + LD + + QE ++L + P L + + + Sbjct: 120 GVELSIQELGGFGAEQALLNDSLDLTFTALPTTH-TQEFDSLELRGYP---LLACLPKEH 175 Query: 180 EERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 ++ + L P++ + + + +I R + + + + + V Sbjct: 176 PLAEKDNIGWQDLAPYPFI--LYNDDFSLTKLIHRLSRSANVELNVAAQSGQWDFIAAMV 233 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRN 278 E + ++P + VN +L Y +P + R Sbjct: 234 EAKMGVAILPKPICQKVNSDSLVYKAL--KPQLTWDLALIWRK 274 >UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMZ4_9SYNE Length = 289 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 99/289 (34%), Gaps = 7/289 (2%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ +A + +AA++++M P I LE + LF R +SL A Sbjct: 1 MNLRQLNYFLAVANELHFGQAAKRLNMAQPPLSMQIKQLESDLDVQLFERTQRKVSLTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIG-IDNTYPTIIFDQLISLGDKYEGV 121 G+ L ++ + +R+ + + R + ++ I + + +I+ + + Y V Sbjct: 61 GEVLKKEAEQILERIEVARRKTQQADRGETGQMAIAFVSSAMYSILPPWISAFRQSYPQV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISEL-PPLRLGFLVSRRYE 180 E + I L Q+D + + + L L G +S Sbjct: 121 ALTFQEATGLEQISGLLSHQIDIGFVRPPIEDVSISDKVVWREPLVVALPEGHRLSTH-- 178 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + L++ P++ ++ + I + + +P I + V Sbjct: 179 KAISISSLEQEPFILIQRPLASEMYDKIISFCQQASFSPNITQTAQQLQTILGLVAANLG 238 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + ++P A +L P E + R + + Sbjct: 239 IAILPTAAQKLQRAGICYRPFIETTPAV--ELVMIWRKDETSRLRENFL 285 >UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WUA0_ALIAD Length = 298 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 106/296 (35%), Gaps = 14/296 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD +++ F+ +A+ + RAA+++ +T P + I LE++IG TLF R + + L Sbjct: 1 MD-TELRQLEYFVAVAEELHFGRAAKRLGLTQPPLSQQIQKLEDEIGVTLFDRTNRRVQL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLI-SLGDKY 118 AG+ L ++ V + ++ R + + + ++I + +++ Sbjct: 60 THAGRVLLEEARKVLAHVQTAVKAARDAAAGRVGRLSVAFVGSATYGWLPEVIRAYQERH 119 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V E S ++ L +LD + +L + + +V Sbjct: 120 PDVELVLREMSTPAQMEALTAGELDVGVLRLPAQHP-----DLHVRLVERDDCVAVVPSE 174 Query: 179 YEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + L L E P++ + R G P + + Sbjct: 175 HPLATRSSLFLVELAEEPFVLVSRAIWPGLYDGFITLARALGFEPRVRLEVTEVQTAVGL 234 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 V G ++++P A V+ ++Y + E + R + + +A Sbjct: 235 VAAGLGVSIVPS-ATERVHRRDVRYLHIDGQS-PTVELGVAWRRRDTSPLVAAFLA 288 >UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Tax=cellular organisms RepID=CYNR_ECOLI Length = 299 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 109/292 (37%), Gaps = 15/292 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +S+ + F+ +A+ + RAA +H++ + I LEE +G LF R I L A Sbjct: 1 MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSRE-IVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G+ Q Q L A IH+ +R + I + T+ + L++ +Y + Sbjct: 61 GEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE- 180 T Q E S+ + D L +LD I+ V + L L L +V++ + Sbjct: 121 TLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSP-----ELEAIPLLTESLALVVAQHHPL 175 Query: 181 ---ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 E+ L + + + ID G++P ++ S A + + R Sbjct: 176 AVHEQVALSRLHDEKLVLL--SAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRR 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 T++P A LK + L +N TA + Sbjct: 234 TSLSTLLP--AAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFL 283 >UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVR3_RUBXD Length = 305 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 101/269 (37%), Gaps = 4/269 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F+ +A+ + AA ++ ++ P I ALE ++G LF R + L +G+ Sbjct: 4 RQLRYFVAVAEEQSFGGAARRLRISQPPLSLQIKALERELGVRLFDRNTRRVMLTDSGRA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP-TIIFDQLISLGDKYEGVTAQ 124 ++ + + + + R ++ +G ++ +++ + +++ GV + Sbjct: 64 FLERARVILEEVERAKETAKGAERGLLGKLEVGFVSSATLSLLPPAIRLFRERFGGVELE 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E + ID L++ + + + A LE + E + L +R Sbjct: 124 LRELTSAQQIDALYNGETRVGLVRLPLRAPGIHLEPV-FEERLVVALPSGHPLEALDRVS 182 Query: 185 QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVI 244 E + +LP + Q A I + G P + + V G ++++ Sbjct: 183 LEAIADLPLIFFTRQLIPGLHAQIIELFQRVGAFPNVAQHAVHLQTIVGLVASGVGISIL 242 Query: 245 PHFAWRLVNPATLKYFDAPHRPMYMQEYL 273 P A R V + Y L Sbjct: 243 PSSAMR-VRREGIVYLPLDEDDATSWLGL 270 >UniRef50_C0BY92 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=C0BY92_9CLOT Length = 311 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 115/294 (39%), Gaps = 15/294 (5%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 I ++ F+ LA + AA+K+ +T +I++LEE++G +LF R+ N++L K Sbjct: 15 IMNLNQLHYFVTLAHMEHYTNAAQKLSITQPSLSHAISSLEEELGTSLFERQGRNVALTK 74 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEG 120 G+ + L A + + RS ++ IG T + ++IS + Sbjct: 75 YGRLFMEYAEEALDILDAGIKKTRAMTSERSGKVDIGYIYTQGSEFIPEVISGFLEANRD 134 Query: 121 --VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V +++ + + + D + V + L + +L V Sbjct: 135 KKVEFGFSNGVTKEIVEGVKEEKYDIGFC-----SMVTGEKELDFVPVSQEKLIAAVPPE 189 Query: 179 YEERQEQELLQEL--PWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + +++ + E + Q+ F + +I + GI P I+Y A + V Sbjct: 190 HPLAEKKSVRFEEIASYPQIFFNRGSGLRGVISQIFKDYGIKPDIVYTVDEDSAMVGLVA 249 Query: 237 RGHFLTVIPHFA-WRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 RG + ++P A R + + L+ D +R Y+ +++N Sbjct: 250 RGFGVGIVPDAATVRSMKASFLEIEDLDYRRF---IYMVTLKNKYQVPVAKAFT 300 >UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IJK2_METNO Length = 306 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 100/270 (37%), Gaps = 15/270 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + +R F++LA+ + RAAE ++M P + I ALE+++ TLF R I L Sbjct: 1 MDL---RHLRYFVVLAEQRHFGRAAELLNMAQPPLSQQIKALEDELEVTLFDRSTRPIEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP-TIIFDQLISLGDKY 118 AG+ L ++ + +S +G+ +VIG+ + + L++ ++ Sbjct: 58 TAAGRTLLREARQILHHVSRAQAATRRAGQGQDGHLVIGVTGSAAMEFLPPVLLAFRARW 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + E S I L ++ V + L + + + Sbjct: 118 PDIRLSLREMSSPEQIAALERGEIHIGFVRPPVLD-----DRLNVRLVHQDPFVVALPGD 172 Query: 179 YEERQEQEL-LQEL---PWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + + + L +L + F +I R G P + ++ Sbjct: 173 HPQAGVEGVRLADLNGTALIIFDPAEAPGFRDLIIHVCRTAGYVPETLESAPQMTTMLAL 232 Query: 235 VERGHFLTVIPHFAWRL-VNPATLKYFDAP 263 V G ++P A RL + + P Sbjct: 233 VSAGLGFALVPRSARRLALERVVFRPLLDP 262 >UniRef50_Q8XFS3 Probable transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XFS3_RALSO Length = 306 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 95/259 (36%), Gaps = 13/259 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++R F++LA+T + RAA ++ + P I LEE++G LF R + + L Sbjct: 1 MDL---RRLRYFVVLAETLHFGRAALRLSIAQPPLSHQIRVLEEELGARLFDRNNRRVEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP--TIIFDQLISLGDK 117 AG L + + + R E+ IG + +I +++ Sbjct: 58 TAAGMALLPEARALLAQAEKASTIAARVERGELGELRIGFTSAAALTQVIPRLILAYRRD 117 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 + GV E + + + +R+LDF + + L + Sbjct: 118 WPGVRLSIRELTTQEQLTAMLERRLDFAFVRGTAAPDLPPA--FGAVRLFEDAFVVALPP 175 Query: 178 RYEERQE-----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 ++ + L P++ ++ + + R G P ++ S + Sbjct: 176 QHPCADNDGSLFVKALANEPFVMYPPESGTGAYEQVLSLCRHAGFAPQVVQEALSAATMV 235 Query: 233 SAVERGHFLTVIPHFAWRL 251 V G + ++P R+ Sbjct: 236 GLVAAGLGVALVPESFQRI 254 >UniRef50_Q1DBN8 Transcriptional regulator, LysR family n=2 Tax=Cystobacterineae RepID=Q1DBN8_MYXXD Length = 301 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 105/269 (39%), Gaps = 12/269 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++++ F+ +A+ + RAA +I M PF + I LE ++G L TR ++L A Sbjct: 1 MEFRQLQLFVAVAEELHFGRAAARIGMAQPPFSQQIRRLESELGVELLTRTSRRVALTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYP-TIIFDQLISLGDKYEGV 121 G L + + R + + + + + + + +G + ++ D ++ ++ V Sbjct: 61 GSRLLEDARALLARRADVIHSVQQAASGETGTLRVGFAASSAFGVLPDIVLRFRTRFPKV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + V L +LD I E LT+ L R + R+ Sbjct: 121 KLELDDSETLDVGAALVSGELDIAIIRAPFRH-----EGLTVERLLQERFVLALPARHPR 175 Query: 182 RQEQ----ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 ++Q L P++ + ++ + G +P I+ S+ + + VE Sbjct: 176 ARQQVVALSSLANEPFVLFPRHSAPGLHDLVTSMCLGAGFSPNILQEASSWPSVVGMVEA 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRP 266 G LT+ P + + P + + P Sbjct: 236 GLGLTIAPASSQ-ALCPKGVVFRPLSGAP 263 >UniRef50_C6XUT8 LysR substrate-binding n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XUT8_PEDHD Length = 294 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 118/284 (41%), Gaps = 11/284 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I +++ FI A+ + AA +T S + I LEE++G LF R ++ L Sbjct: 1 MEI---RQINYFIKAAEMLHFTEAAAACFVTQSTLSQQIKQLEEELGMLLFDRVGKHVRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG + + + I + ++ IG+ + +++ L KY Sbjct: 58 TEAGNVYLKHARQIVLDVKKSKQAILELNNLVTGDLKIGVTYAFSSMLLPALAPFSSKYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 G+ + + NL +LD I++ + + +L + L R+ +VS+++ Sbjct: 118 GIKIVVEYGTAGELEHNLKQAELDVILAFHDQT--DNDNVSLEMEHLFSSRISMVVSKKH 175 Query: 180 EERQEQEL-LQELPWLQMRFQNRA-NFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 +++ L EL +++ ++ + +++ R ++P I + +S V+ Sbjct: 176 PLAGLKKISLNELAKVELILPSKGFSSRDLLNELFRKRKLSPLIKIEMNDVHSLLSMVDE 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRY 281 G++ T+I A ++ L + Y Q ++ + Y Sbjct: 236 GNWATIINEKA--ILTWENLIAIPISGKEYYKQAFIL-WQKGIY 276 >UniRef50_B2JUD8 Transcriptional regulator, LysR family n=12 Tax=Burkholderia RepID=B2JUD8_BURP8 Length = 298 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 101/250 (40%), Gaps = 7/250 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A+ N+ RAAE++ + P + I ALE+++G LF R + + L +AG+ Sbjct: 4 RHIRYFLAVAEERNVTRAAERLGIGQPPLSQQIHALEDELGVRLFRRTGHGVVLTEAGES 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP--TIIFDQLISLGDKYEGVTA 123 + ++GR + IG + ++ + + Y VT Sbjct: 64 FAADAKRILHDTRLAVENAQSAGRGEIGQFNIGFTGSAAFNPVVSKLIRAYRQAYPNVTL 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 E + ++ L D ++D + ++ + P+++ + R +++ Sbjct: 124 TLAEGNTAQLLAYLDDDRVDVAFVR--LGSQSPAGVQFHHIAIEPMKIVLPATHRLAKKR 181 Query: 184 EQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 + L L E P++ + + +I R G P + + ++ V + Sbjct: 182 KIALSALAEDPFVMLPREASPTLHDVIVGACREAGFEPIAGQQAPQLSSVVNLVAAEFGV 241 Query: 242 TVIPHFAWRL 251 +++P ++ Sbjct: 242 SLVPASVCQI 251 >UniRef50_P77559 Uncharacterized HTH-type transcriptional regulator ynfL n=179 Tax=Gammaproteobacteria RepID=YNFL_ECOLI Length = 297 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 108/295 (36%), Gaps = 14/295 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I + +R F+ +A+ + RAA +++++ P + I ALE+QIG L R + ++ L Sbjct: 1 MNI-ELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTI--IFDQLISLGDK 117 AG++ + + + + E+ IG ++ P I + D L Sbjct: 60 TAAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRD 119 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 Y V Q E + I L + LD + E+L + + L ++ Sbjct: 120 YPDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALP-----ESLEHAVIVHEPLMAMIPH 174 Query: 178 RYEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 + + L + P++ I MR + P I M I Sbjct: 175 DHPLANNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIG 234 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 V G ++++P R V +++ + +L ++H + Sbjct: 235 LVSAGLGVSILPASFKR-VQLNEMRWVPIAEEDAVSEMWLVWPKHHEQSPAARNF 288 >UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=Micrococcaceae RepID=A0JW92_ARTS2 Length = 306 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 95/251 (37%), Gaps = 10/251 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++ ++ FI +A+ + RAA ++HM P + I LEEQ+G L R + L A Sbjct: 1 METRHLKYFIAVAEERHFGRAAARLHMAQPPLSQQIRQLEEQLGTPLMVRTTRKVELTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLISLGDK-YEGV 121 GQ L + + Q L +++++ G + + +G T + ++ + G+ Sbjct: 61 GQVLLDRGRVLLQELQVLESDVQQVGEGATGVLRVGFTGTATYRLMPIIVQAARRTLPGL 120 Query: 122 TAQPV-EFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 E + L + +LD + V + L + E L Sbjct: 121 RITVQGEMLTPQMEAALEEGRLDAAVLRPPVHSGAIA---LKLLEQDQLVAALPADSPLA 177 Query: 181 ERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 E+ EL L E ++ + + ++ R G P ++ +S V G Sbjct: 178 EKGTLELAALSEEGFI--GYPGYSAVSSIFVDACRKAGFQPRVVQEAKETSTLLSLVASG 235 Query: 239 HFLTVIPHFAW 249 + ++P + Sbjct: 236 MGIALVPMTSR 246 >UniRef50_Q13QG4 Transcriptional regulator, LysR family n=4 Tax=Burkholderia RepID=Q13QG4_BURXL Length = 302 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 111/294 (37%), Gaps = 7/294 (2%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+ + ++ F++LA+ N +RAAE++H+ + I +LEE++G L R +SL Sbjct: 1 MNHMNLRALQCFVILAEELNFSRAAERLHIAQPALSQQIRSLEERLGTQLVDRARRPLSL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSRE-IVIGID-NTYPTIIFDQLISLGDKY 118 +AG L + + L + G R + IG ++ +++ L + + + Sbjct: 61 TEAGHYLCSEARQILGTLEQMTVVAQEIGIGRRGWLSIGFTRSSMYSVLPPALKAFHEAF 120 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISE-LPPLRLGFLVSR 177 V + E D L D ++ I Q ++ L + L G ++ Sbjct: 121 PQVELKLFEMLTEEQTDALRDMRIHIGIGRQPLAVEGCTSYPLLSEPVMAALEPGHPLAA 180 Query: 178 RYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + R L + P + A F+ + + R GI P + + Y I+ V Sbjct: 181 HKKVRIA--DLADTPLILYPKHQNAQFKRSVLSLYRDAGITPAVAHEAYEIQTAIALVAA 238 Query: 238 GHFLTVIPHFAWRLVNP-ATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 G +T I R ++ P Y + R + + +A Sbjct: 239 GLGVTFIGESVARHGRTDVAFRHLTGPGSS-YRSTLAATFRTDDPSPHLRAFLA 291 >UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELK2_ACIF5 Length = 308 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 97/280 (34%), Gaps = 7/280 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R FI +A+ + +RAAE++ ++ P + I LEE +G L R + ++L AG+ Sbjct: 6 RHLRYFIAVAEDLHFSRAAERLGISQPPLSQQIHTLEEMLGARLLVRTNRRVALTDAGEA 65 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNT--YPTIIFDQLISLGDKYEGVTA 123 ++ + ++ + + + R E+ IG+ + + + ++ V Sbjct: 66 FLKEARAILVQVDRAVDYVRSVERGEKGELHIGMTRSAMLAKQVPRAIFRFRTEFPSVHL 125 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENL----TISELPPLRLGFLVSRRY 179 E + ID L ++ I + + L ++ LP +S Sbjct: 126 GLEELNSLEQIDALIHEKIQVGIMRVQHLPAMLQSHMLYADPLVAVLPAKHPFCPISPTL 185 Query: 180 EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 + L ++ G NP I+ I V G Sbjct: 186 SVPLDPAQLVHEQFIIFADSAGTGIRNQFYQICHDAGFNPRIVQEVQEASTMIGLVAAGL 245 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNH 279 +T++P L + + +Y R+H Sbjct: 246 GITILPVSYSYLQQDSVCYIPLSSPSARSDIHVVYRCRDH 285 >UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Actinomycetales RepID=A4FE82_SACEN Length = 294 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 95/267 (35%), Gaps = 12/267 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ F+ +A+ + RAA+++H+ S SI +LE ++G LF R N++L AG Sbjct: 4 RQLEYFVAVAEECHFTRAAKRLHVAQSGLSASIRSLERELGARLFHRTTRNVTLTAAGHA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTI-IFDQLISLGDKYEGVTAQ 124 L + + + + + G E+ IG + + L + G+ + Sbjct: 64 LLHEARRALCAVDSARDAVAAVRGLLRGELSIGTLQCLHVVDLPPVLAGFVTAHPGIEVR 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE---- 180 + + + + +LD + + + + + L L + + Sbjct: 124 LRQGGSGDLAEQVRAGRLDLAFAVRPARCP----DGVLVHSLDTEPLVLACAGDHPMAER 179 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 +R + L E P++ F ++D + G+ + + + V G Sbjct: 180 DRVDPRELGEQPFVD--FHPDWGTRDVVDRVLAETGVERRVALEVTDVHSLLELVACGLG 237 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPM 267 + ++P +P Sbjct: 238 IALVPRSFSAKNGQVRFVPLASPAPTW 264 >UniRef50_Q5FRA7 Putative transcriptional regulator n=1 Tax=Gluconobacter oxydans RepID=Q5FRA7_GLUOX Length = 308 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 112/297 (37%), Gaps = 15/297 (5%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + + + I +A+ N+ RAAE++ + P + + +E+++G LF R + L Sbjct: 1 MIELRHLHAVIAIAEERNLTRAAERLGIQQPPLTRLLKGMEQELGVQLFERHARGMRLTP 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTY--PTIIFDQLISLGDKYE 119 AG+ + + + V +R+ ++ R + E+ IG N+ + D L + + Sbjct: 61 AGRSMLKGAYDVIERMDETVEDVRRIVRGEAGELSIGFTNSALCHPSLPDMLGQFRETWP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V E + + ++ L + +D V + + ++ + + + V R + Sbjct: 121 DVGLTLTEGNSSQLLGALREDTVDVAF----VRTSIPYVSDVVVELIVEEPMVVAVPRTH 176 Query: 180 EERQEQEL-------LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 +E L++ ++ + Q I G P I + +A + Sbjct: 177 RLAKEAPAGGLKLAELEDEDFILYQSQYNNGLYKTIVDACLGAGFTPRIRQKGPQLLAAL 236 Query: 233 SAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + V G ++++P + + + Y R R+ R T L I Sbjct: 237 NLVAGGLGISLVPQSMQQH-HAGQVVYIPLSSRTALTAPLYLVFRSVRMTGAKLYFI 292 >UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=Proteobacteria RepID=A0K8T5_BURCH Length = 308 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 101/249 (40%), Gaps = 7/249 (2%) Query: 2 DIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLN 61 D +++R F+ +A+ + RAA+++ ++ I E+ +G LF+R + ++L Sbjct: 7 DTVELRQLRYFVAVAEELHFGRAAKRLFISQPALSFDIRKFEDALGVQLFSRTNKTVALT 66 Query: 62 KAGQELYQKLFPVYQRLSAIDN-EIHNSGRRSREIVIGIDNT-YPTIIFDQLISLGDKYE 119 AG+ L + + + + + ++ + + IG ++ + D + Y Sbjct: 67 NAGEVLLGEARRLLLQADEAERLTVRSASGLAGRLRIGFVHSMLYRGLPDAVRRFEADYP 126 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 GV E + + + + Q+D H E+E++ + P + + Sbjct: 127 GVEVVLSEMNTHAQVQAIQRGQIDLG--YAHWGHFPPEVESVAVYAEPFVC-CLPAAHPL 183 Query: 180 EERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 R++ L L P++ ++ +I A G +P I + + +S +E Sbjct: 184 ARRRQVALATLATEPFILFPRDAAPHYHDLIIAQCVNAGFSPLIRHEARLWQTILSMIEF 243 Query: 238 GHFLTVIPH 246 G + ++P Sbjct: 244 GMGIALVPR 252 >UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCK2_BREBN Length = 295 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 109/271 (40%), Gaps = 13/271 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R + +A+ + +RAA ++H+ + IA LE+ +G +LF R ++ L AGQ Sbjct: 4 RQIRYVLAVAEERSFSRAANRLHLAQPSLSQQIAKLEKILGVSLFHRLPQHVELTDAGQR 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGIDNTYPTIIFDQ-LISLGDKYEGVTAQ 124 Q + ++ E+ S ++++G + + L + ++ GV Q Sbjct: 64 FIQVAQTLVDMSEGLEREMRAYAVGESGKLLVGSLPITGAYVLPRVLPTFTKQFPGVELQ 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 +E + + + L ++D + +S E+ E+ L + +R+E Sbjct: 124 LMEETSSHLEQLLVRGKIDVSLLTMPISDPSLEIIPAINEEI---FLAVPANHPLAKRKE 180 Query: 185 QEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 +L + + P++ ++ F + G P I++ + S V G L+ Sbjct: 181 VDLAEVADQPFILLK--EGQGFRTISLRLCEQAGFRPRIVFESSNIQTAQSLVAAGMGLS 238 Query: 243 VIPHFAW----RLVNPATLKYFDAPHRPMYM 269 P + P ++ P R + + Sbjct: 239 FAPKMITLAPGTIEPPTYVRIKTKPSRTLVV 269 >UniRef50_B2SBJ3 ALS operon regulatory protein n=36 Tax=Proteobacteria RepID=B2SBJ3_BRUA1 Length = 299 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 104/288 (36%), Gaps = 13/288 (4%) Query: 1 MDI-FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNIS 59 MDI + +R F+ +A+ N RAA K+ + P + I LE +IG LF R + Sbjct: 1 MDIPMELRHLRYFLAVAEEGNFTRAAAKLGIGQPPLSQQIRDLENEIGVMLFHRVPHGAE 60 Query: 60 LNKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGI--DNTYPTIIFDQLISLGD 116 L AG ++ + R S + +G + + I+ + Sbjct: 61 LTAAGAAFLEEATATIASSEKAKLAAQRAARGESGRLSLGFTASSAFNPIVSGAIRHFRA 120 Query: 117 KYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVS 176 K+ V E + N +I+ L +LD + +++ N+ + L + + Sbjct: 121 KWPEVELFLTEMNTNLLIERLVRGELDTAF----IRPGLEDPANVRMKRLADEPMLVALP 176 Query: 177 RRYE----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 + ER L P++ + I A R G + + + Sbjct: 177 SHHRLAVYERLPLSALAGEPFVLFPRIVGLSLYDDIAAACRMAGFEMNVTQEAPQMPSVV 236 Query: 233 SAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHR 280 + V ++++P A + + Y P+ + L S+++ R Sbjct: 237 NLVAANLGVSIVPA-AIAQIRLDGVTYRPIEGEPLVARLALASMKSLR 283 >UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3V4_HERA2 Length = 298 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 114/289 (39%), Gaps = 11/289 (3%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R F +A+ N+ +AA + H+ K++ ALE+++G LF R + L+ AG+ L Sbjct: 5 QLRYFEAVARLGNVTKAAHEQHIAQPSLSKALRALEQELGVHLFDRVGRGVELSDAGKLL 64 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQ-LISLGDKYEGVTAQP 125 V L A + + + + + +G+ T T + Q L + +Y G+ + Sbjct: 65 LPYARRVLAELQAARHALQSRADLTVGHVSLGVTPTVGTRLIPQALAAFNRRYRGIQLEL 124 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 E + +++ L +D I VSA V +E+ T+ P L + + R+ +RQ Sbjct: 125 HEAGASELVELLNAGVVDLAI----VSALVHGVESTTLMSEP-LVVAVGLQHRFAQRQSI 179 Query: 186 EL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTV 243 L++ ++ F G P I+ +S V G + V Sbjct: 180 AANELRDEGFI--LFPQGYELRNYTLQLCEQAGFAPRIVLDGGEMDTVVSLVAAGLGVAV 237 Query: 244 IPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAED 292 +P A DA ++ +S R A L + + Sbjct: 238 VPQLAIDQRMGLHALMIDAGGLQRTLRLIRHSQRQPSPAAAALHRVLHE 286 >UniRef50_Q3AEF0 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEF0_CARHZ Length = 301 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 121/289 (41%), Gaps = 9/289 (3%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++ F + + +I++AA+ +H++ IAALE Q+ L R + I L +AG+ L Sbjct: 5 QLEAFCNIVEQGSISKAAKLMHLSQPALSTQIAALENQLQVKLMERTNRGIELTEAGETL 64 Query: 68 YQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFD-QLISLGDKYEGVTAQP 125 + + ++ EI E+ IG +T + +KYE + Sbjct: 65 LYYAKRICNLVKNLNEEIERLKNLEEEELSIGAASTIGGYALPCSIYIFQEKYESARIKL 124 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 + VI+ L DRQ+D + ++ + +LT EL L + S + +E Sbjct: 125 TIMNTEKVIEALLDRQIDIGLVESNIESNEFISSHLTYDELV-LVVPNNNSYKNKEILTL 183 Query: 186 ELLQELPWLQMRFQNRANFEAMIDANMRPCGINP---TIIYRPYSFMAKISAVERGHFLT 242 + L+ LP++ + + I+ + G+N I+ S A AVE G ++ Sbjct: 184 DELRTLPFI--IREKGSGIRQTIEKALAEKGLNISDLNIVMEVNSIDAIKVAVESGKGVS 241 Query: 243 VIPHFAW-RLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 ++P FA + + +LK + +++N + + + +A Sbjct: 242 LLPRFAVKKELRTGSLKSIKVKDISLLHPFVAITLKNKKRSLLEKKFLA 290 >UniRef50_A6VSP2 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSP2_MARMS Length = 296 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 113/288 (39%), Gaps = 7/288 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +K+ FI +A+ + RAA ++H+ P + I A+E++IG LF R +SL AG+ Sbjct: 4 RKLNYFITVAEELHFGRAAARLHIAQPPLSQQIKAIEDEIGAVLFERSSQKVSLTPAGEA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQ-LISLGDKYEGVTAQ 124 L + + Q I ++ + S + +G T F + + GVT Sbjct: 64 LLPQARALLQDWEKIQEQVRSIANGTSGNLSLGFVWAAGTPHFSKGIAQFKQDNHGVTLN 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E + +D L +++D + + + +LE+ E L + +++ Sbjct: 124 LEEMTTTHALDALRTKKIDLAMIFLNPLMDITDLEHQDY-ETQKHLLALPENHPLAQKES 182 Query: 185 QEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 L L +LP++ Q + I ++ G+ P I+ + V G + Sbjct: 183 VPLSDLHQLPFISFVRQAHPSLYDQIMHHLHAAGVEPNIVQIARLTQTTRTLVAAGVGVA 242 Query: 243 VIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 ++P + L Y + + + R + T M + IA Sbjct: 243 LVPES-TQFDRREGLTYRPIDGV-LPELDIHFVWRKNGLTPLMERLIA 288 >UniRef50_A4W926 Transcriptional regulator, LysR family n=1 Tax=Enterobacter sp. 638 RepID=A4W926_ENT38 Length = 303 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 103/295 (34%), Gaps = 7/295 (2%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++ + FI +A+ + RAA+++HM P ++I LE++IG +LF R + ++SL Sbjct: 1 MIETRLLTQFIAVAEELHFNRAAQRLHMAQPPLSQAIRRLEQEIGVSLFERTNRSVSLTP 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTI-IFDQLISLGDKYEG 120 AG V + L +I + + + + + L + Y Sbjct: 61 AGVTFLDSARDVLRLLDEGVEKIRRVSQGIEGHLTLTFISLAGYAPLLRALKNFRAAYPA 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V+ E + ID L + D + + E P+ + + R Sbjct: 121 VSFTMEEATTQEQIDALEQGRADLGFMRPPGRTSPGLRFDAILRE--PVVIALPAAHRLV 178 Query: 181 ERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + +L LQ ++ F + G P I + ++ V G Sbjct: 179 DSGTVKLAALQNDHFVSPPRHLGQGFHDQLIQLCEAAGFRPHISQQARQLQTLVTLVASG 238 Query: 239 HFLTVIP-HFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAED 292 + ++P A + + + L N R T+ + + E+ Sbjct: 239 FGVALLPASLAHEMREDVVFRPLEVDAPDELKHVELLMGWNARSTSIIRDKLIEE 293 >UniRef50_A9HZJ0 Transcriptional regulator, LysR-family n=2 Tax=Burkholderiales RepID=A9HZJ0_BORPD Length = 297 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 96/263 (36%), Gaps = 13/263 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD +++R F+ +A+ + + AA ++H++ P I ALEE++G L R + + L Sbjct: 1 MDF---RQLRYFVAVAEELSFSGAARRLHVSQPPLSLQIKALEEELGSVLLNRNNRKVEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTI--IFDQLISLGDK 117 +AG ++ L + + + R + E+ + + P + + + Sbjct: 58 TEAGTLFLEQARRALAYLERAGDVVRQAARGEAGELRVSFTASVPMFEAFPQIVQAFRAR 117 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 + G A + S + L D+ +D S + N+ +++L RL ++ Sbjct: 118 HPGARADLIHLSTGQQLRALADKSVDIGF--LRPSPLFEPPANIAVAQLWTDRLVAVLPA 175 Query: 178 RYEERQEQ-----ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 + + L + ++ + G P + I Sbjct: 176 GHALARRPGPLPMAALADESFILFPRGLGCGLFEHVTVLASRAGFAPHVRQEAREGATII 235 Query: 233 SAVERGHFLTVIPHFAWRLVNPA 255 V G ++V+P + P Sbjct: 236 GLVAAGMGISVLPDTYMKTGIPG 258 >UniRef50_Q12DJ6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q12DJ6_POLSJ Length = 300 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 123/294 (41%), Gaps = 11/294 (3%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + + +R F+ +AQ + A A+E++ +T + G + ALE ++ LF R + L Sbjct: 1 MSTIRFLRTFLAVAQEGSFAGASERVALTQAAVGLQMRALEAELKTGLFERSGRGVLLTV 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVT 122 AG+ L + + + + + +G + ++ + ++++ ++ + Sbjct: 61 AGRALIAHAEKIIACYEQMREGLEEENEIAGTVTVGSTVSAMGLLSNTVVAMKPRFPRLN 120 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR--RYE 180 + V +G+ ++ LD + + E + L + L L + S Sbjct: 121 VRLVVQESSGLAQSVISGALDAAVM---IEGPPMERQGLLWTPLYVEPLTLVASSLVAGP 177 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + ++LL+E P+ +RF R I+ +R G+ P S + I V + Sbjct: 178 DSDIKKLLRENPF--LRFDRRTPSGIRIEQTLRKLGLMPQDFLELSSVSSIIDLVRQNVG 235 Query: 241 LTVIPHFA-WRLVNPATLKYFDAPHRPMYMQEYL--YSIRNHRYTATMLQHIAE 291 +TV+PH+ VN TL+ P RP Q + + R H T+ + QH+ Sbjct: 236 VTVVPHWRNADWVNDPTLRVLSLPGRPATRQIGMLEHGKREH-ITSVIRQHLVS 288 >UniRef50_B5XSE9 Transcriptional regulator, LysR family n=6 Tax=Enterobacteriaceae RepID=B5XSE9_KLEP3 Length = 296 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 119/291 (40%), Gaps = 12/291 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R+F+++A+ ++ RAAE++H+ + I LE+++G LF+R + ++L AG+ Sbjct: 4 RALRHFVVVAEELHMHRAAERLHIAQPALSQQIKQLEQRLGVVLFSRANRRLTLTAAGEA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNT--YPTIIFDQLISLGDKYEGVTA 123 QK + + + R + +G ++ Y + + L L + G+ Sbjct: 64 FLQKTRLALEMADQAVLDAQRTARGEQGRLHLGYVSSAMYDSKLPGLLRELRADWPGIEL 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 V+ + + L D +LD I +++ + L + +L + +++ Sbjct: 124 SLVQGDVQMLYEALLDLRLDIAIIRAPLASPP---DALVVRPFVREKLCLALYQQHPLAG 180 Query: 184 EQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 L L+ W+ + E + R G P ++ R + IS V G Sbjct: 181 VGALNLASLRTDNWISLDDPQGTGLEQVFIDACRVAGFTPQVVQRINDVTSMISLVSAGV 240 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 + ++P A R + + Y D R + E H +A + + I+ Sbjct: 241 GVALVPVSA-RALRLDNVVYIDLQDR-LAESELSMVYHRHFRSAVVRKVIS 289 >UniRef50_Q12DG5 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12DG5_POLSJ Length = 289 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 110/291 (37%), Gaps = 8/291 (2%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++ F+ +A+ + +RAA ++H++ P + IA LE+++G L R + ++L Sbjct: 1 MDL---RQLSYFVAVAEELSFSRAASRVHISQPPLSRQIAKLEQELGAVLLIRSSHEVAL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIG-IDNTYPTIIFDQLISLGDKY 118 +AGQ L ++ + + I + + R + + IG + +T T + L Y Sbjct: 58 TQAGQALLEEARRLLALAAGIPEVVGRASRGETGSLRIGFVGSTIYTSVPALLSQYRQIY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + + L + ++D I Q V+ +L E L Sbjct: 118 PHVAVSVQQLTVARQTVMLKNSEIDVGIIRQAVTEPWLATRSL-FKEGFMAALPVHHRLA 176 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 ++R + L E ++ + G +P I+ Y + V G Sbjct: 177 GQDRVMLQSLAEDDFVFFSRSEAPAIHEQLRKMCEAAGFSPRIVQEAYPMSTVVGLVAAG 236 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + ++P RL L R E+ + + T+ + Sbjct: 237 VGIAIVPESMQRLQMQNVLYRALRGTRAKT--EFFLAWHVGNTSQTLRGFL 285 >UniRef50_A4FAR0 Transcriptional regulator n=4 Tax=Actinomycetales RepID=A4FAR0_SACEN Length = 307 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 68/305 (22%), Positives = 122/305 (40%), Gaps = 22/305 (7%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +R F ++A+ +I+RAA ++ ++ ++IA LE ++G LF R+ ++ L Sbjct: 1 MDLLP---LRYFRVVARHEHISRAATELRVSQPSLSRTIARLETELGVPLFDRRGRHVRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG 120 N+ G L +++ L E+ ++ + V T T++ + L + + G Sbjct: 58 NRFGATLLRRVERALDELEQGRRELADAAGLAHGSVAVATETLLTLV-EPLTGFRNDHPG 116 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQE-LENLTISELPPLRLGFLVSRRY 179 V + + S +G+++ L ++D + Q V E E L L LG ++ R Sbjct: 117 VDVRLHQSSVDGLLERLRRGEVDLCLMSQPVDDPALESAEVLHEEVLLATPLGHRLATR- 175 Query: 180 EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 ER L P++ R + D G PTI+ A + G Sbjct: 176 -ERIGMGDLDGEPFITTR--PGYWQRVLTDRLFAAAGSRPTIVCEADEPGATAYLISSGL 232 Query: 240 FLTVIPHFAWRLVNPATLKYFDAP------------HRPMYMQEYLYSIRNHRYTATMLQ 287 + ++P A R A L + R Y+ R H TAT+ + Sbjct: 233 GVGLLPATARRFAPHAPLAWLHLDAPDCHRTLTFVWRRDAYVSLAAQEFRAH-VTATVRR 291 Query: 288 HIAED 292 A D Sbjct: 292 AAAGD 296 >UniRef50_B0MH18 Putative uncharacterized protein n=4 Tax=Bacteria RepID=B0MH18_9FIRM Length = 304 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 104/300 (34%), Gaps = 20/300 (6%) Query: 1 MDIF------ISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRK 54 MDI K++ F+ LA+ N AA ++ + S K+I A+EE + L R Sbjct: 1 MDIMGKERSMNLKQLTYFVALAKNQNFTTAANELFICQSALSKTIKAMEEDLDVQLVDRT 60 Query: 55 DNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLIS 113 L G+ LYQ+ + ++ + + + EI +GI TI F +I Sbjct: 61 AKRFCLTPEGRMLYQEGRDALESINNQMEHLRDCINAENGEISVGIPPVISTIYFASIIQ 120 Query: 114 -LGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLG 172 Y G+ E N V + + ++D + ++ ++ I + Sbjct: 121 GFRKAYPGIRLVIAEEGANTVKEKVQSGEIDIGVVILPFAS-----DDFHILPVFKSDNV 175 Query: 173 FLVSRRYEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSF 228 VS + ++ L+ ++ + + G P I+ + Sbjct: 176 LTVSTDHPFAGREKAAFRELRNEEFISL--DKTFMLHSRTRELCHMSGFEPNIVMESSQW 233 Query: 229 MAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 V + ++P N +K P + + IR +Y + ++H Sbjct: 234 DFVAEMVSLNQGVAILPRPILSRFNSDKIKILTLTE-PEFPWDIALIIRKDKYVSNPIRH 292 >UniRef50_P94403 HTH-type transcriptional regulator bsdA n=3 Tax=Bacillus subtilis group RepID=BSDA_BACSU Length = 290 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 97/247 (39%), Gaps = 6/247 (2%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRK-DNNIS 59 MDI +++R FI +AQ I AA+K+HM P + + LE+++G LF R ++ Sbjct: 1 MDI---RQLRYFITIAQEQKITSAAKKLHMAQPPLSRQLKQLEDELGVVLFDRNKKKQMT 57 Query: 60 LNKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKY 118 L G ++ + R E+ + + +G ++ +++ + ++Y Sbjct: 58 LTYEGAVFLKRAKEILHRFEDAVIEVQELKEEVAGTLAVGSTIYCAALMLEKVTQIKERY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 +T E +++ L RQ+D ++ + + + + L L L Sbjct: 118 PHLTFNIWENEPATLLELLESRQIDAAVTTTLIKSDTVQFKQLDDIP-CVLVLSDEAGYP 176 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + + + P + +R N + + P I+ + +S V G Sbjct: 177 CGDTIKMVDIPSFPLILLRPVNGKGVYNQVMNEFHRLNLEPRIVCECHDSATLLSLVSSG 236 Query: 239 HFLTVIP 245 +++P Sbjct: 237 FGASILP 243 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 106/281 (37%), Gaps = 9/281 (3%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++ F ++A+ + + AA +H++ I ALEE G L R ++L AG+ L Sbjct: 5 QLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPAGEIL 64 Query: 68 YQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPT-IIFDQLISLGDKYEGVTAQP 125 Y+ + + +I +G ++++G T ++ L S KY V Sbjct: 65 YKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGGHVLPPLLSSFYRKYPDVNITM 124 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 + V++ + D LD V+ +E L EL + R Sbjct: 125 EIMNTEKVLERVSDLTLDLGFVEGEVTTGELHVEALARDELVVVVAANH-PLAGRGRISW 183 Query: 186 ELLQELPWLQMRFQNRANFEAMIDANMRPCGI---NPTIIYRPYSFMAKISAVERGHFLT 242 E L LP + + + +I+ ++ G I+ S A AVE G Sbjct: 184 EELATLPLVM--REPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAIKGAVEAGLGAA 241 Query: 243 VIPHF-AWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYT 282 ++ + R +N K + P+Y + Y+ N ++ Sbjct: 242 ILSKWTVRREINWGIFKQLLIENLPIYREFYVVLNNNKFHS 282 >UniRef50_A1W235 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A1W235_ACISJ Length = 309 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 106/288 (36%), Gaps = 7/288 (2%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ LA+T N RAAE++HM P SI LEE++G LF R + L A Sbjct: 1 MNLRQLSQFVALAETGNFHRAAERLHMAQPPLSVSIRKLEEELGSPLFERTTTGVVLTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 G+ + + ++ + +GI + + QLI SL +Y + Sbjct: 61 GEAMLGDARRALFHAQQCRQAVQDAREGEGGLLRLGIIGSATYALLPQLIPSLRQRYPQI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + + +++ L R+ D + V E L + L S + Sbjct: 121 ELELSEATSSEILEGLVSRRFDAGLLRYPVL-DPSGFELLPLDR-DDFVLAVAESSPLAQ 178 Query: 182 RQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 R L P++ + A+ + G +P + +S V G Sbjct: 179 RDAIALAEAAHEPFIMYPQHKVPSLSALAMMRCQFSGFSPRVAQEAMQVQTIMSLVASGL 238 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 + ++ A R V P +K P + R T+ +++ Sbjct: 239 GVGLVASVA-RQVVPRGVKCLALTDNPPGFHVGIALARLASGTSRVVE 285 >UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7ZAS3_BACA2 Length = 296 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 117/282 (41%), Gaps = 16/282 (5%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++ F +AQ +I +AA+++ ++ +SI+ LE+++G LF RK NI LN+ G+ Sbjct: 5 QINYFQTVAQVQHITQAAKQLSISQPALSRSISKLEDELGVQLFDRKGRNIYLNRYGKMF 64 Query: 68 YQKLFPVYQRLSAIDNEI-HNSGRRSREIVIGIDNTYP-TIIFDQLISLGDKYEGVTAQP 125 ++ +++ E+ + S I++ + +++ D + S Y V Q Sbjct: 65 LHRVEQSIRQIEIGKQEVWNEIHPNSGTILLSFLPSLGMSMVPDVISSFQHMYPHVNFQL 124 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ-- 183 + S +I+ L R++D ++ + E +++ L L VS + Sbjct: 125 TQASNQQIIEQLTSREVDIALT-----SLRDENDDVICQPLLTEELYLAVSAEHPLASYD 179 Query: 184 --EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 + ++ + P++ F++ MI G +P +++ + V + Sbjct: 180 EIDLKMAEHEPFIS--FKDTNVLHGMIKELCEKAGFSPDVVFEGEDIVTASGLVGAKLGV 237 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTA 283 ++IP V T + P+ +E + R Y + Sbjct: 238 SLIPDL---HVFDKTKVKLLSVTNPICEREIGLAWRKDGYLS 276 >UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=Clostridia RepID=Q3AG03_CARHZ Length = 302 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 96/244 (39%), Gaps = 13/244 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ F +++ N+ RAAE++H+ +I LE+++ LF R + L G+ Sbjct: 4 RQLEYFYAVSKLNSFTRAAEQLHVAQPSITIAINNLEQELKVQLFDRSKRKVVLTDEGKL 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 Q + + + + +E+ + + I +GI +F ++ + Y + Sbjct: 64 FLQHVEKILKDVKKAQSELEDLKNYKKGVIKLGIPPMIGAYLFPKIFKGFKNAYPHLELH 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY----E 180 E ++ L + +LD + ++ ENL + + ++ VS + E Sbjct: 124 VREEGSWAMVSLLENGELDLGLIILP-----EQSENLCMLPITKDQIVLCVSENHRFSQE 178 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 +R L++ ++ ++ + I A G +P I+ V G Sbjct: 179 KRISLRQLEDEQFILLKED--SYTRHKIIALCNYYGFSPNILLSSCQIETIKELVSNGLG 236 Query: 241 LTVI 244 +T + Sbjct: 237 ITFL 240 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 106/292 (36%), Gaps = 16/292 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++R FI +A+ N +AAE +H+ ++ LE+++ +LF R+D +SL Sbjct: 1 MDV---RQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLIS-LGDKY 118 G+ + L A + E+ G E+ +GI F +I Y Sbjct: 58 TAEGEIFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISAYFFPDIIRDFKKSY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + + + + +LD + A E L + + V Sbjct: 118 PQLHLSVLGEGAWRIQKMIGQGELDMGVV-----AGGNFPETLEVRRFLREEIVICVPPD 172 Query: 179 YE--ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + +R+ L++ + + ++ ++ G P I++ F S V Sbjct: 173 HPFAQRKSVSLVEFIREPLVFYKEGYYIREFFLEVLKGAGSAPNIVFETNLFSLVKSLVR 232 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G +++ R+V A P P + L + + Y + + Sbjct: 233 NGTGISIF----LRMVVAADTDLVAVPFDPPLHLDLLIAWKKDTYLSLANRA 280 >UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=Frankia sp. EuI1c RepID=D1VD43_9ACTO Length = 361 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 96/295 (32%), Gaps = 7/295 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ F+ +A+T + RAA ++H+ I ALE ++G LF R NI+L AG+ Sbjct: 22 QQLAYFVAVAETKHFTRAAARVHVAQPSLSAQIRALETELGSPLFNRARGNITLTAAGEA 81 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 L + E+ + R + +G + T + +++ +Y G+ Sbjct: 82 LLPLARKILADADMARREVQELTDLRRGTVRVGATPSLCTGMLPEVLRLFRQRYPGIQLL 141 Query: 125 PVEFSENGVIDNLFDRQLDFI--ISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 E ++ L LD I P S L +L + + Sbjct: 142 VEEGGSRDLVGELAVGALDLALIILPLQGSDPALATAPLLREDLVVISSPDGPPPVRTAQ 201 Query: 183 QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 E L++ P + R + R G PT A V G + Sbjct: 202 MAVEDLRDRPLVMFR--RGYDLRDFTVGACRAAGFEPTFAIEGGEMDAVCGFVMAGLGIA 259 Query: 243 VIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 VIP P F AP + A L+ D + Sbjct: 260 VIPSMVA-FRQPLRTTPFAAPGLHRTIGLAHRRDVEPPRAARELRATLVDFVANA 313 >UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=Q31FC6_THICR Length = 318 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 115/296 (38%), Gaps = 13/296 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 ++++ F +A+ + +AAE +HMT + LEE LF R N I+L AG+ Sbjct: 4 RRLQVFYTVAKVLSFTKAAETLHMTQPAVTFQVKQLEEFFNTRLFDRTHNKITLTDAGKI 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQ 124 +Y + +++E+ +G + ++IG T + L+ + ++E V + Sbjct: 64 VYDYAEKILDHYEKMNSEVRELTGEVTGSLLIGASTTIAEYMLPSLLGAFKKQFEDVNIR 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 + + ++ + + +D + V + E+E + L + L R + Sbjct: 124 LQVGNTDAIVAMVENNMIDLGVVEAPVYNKNLEVE---VCRLDEMVLIVPHGHPLSNRDK 180 Query: 185 QELLQELPWLQMRFQNRANFEAMIDANMRPCGIN---PTIIYRPYSFMAKISAVERGHFL 241 + + + + + ++ID +R G++ ++ S A AVE L Sbjct: 181 ISIEDMRKYRYISREEGSGSRSVIDNYIREQGLSYSDLNVVMELGSPEAVKMAVESDVGL 240 Query: 242 TVIPHFAW-RLVNPATLKYFDAP---HRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 ++ + + TLK +RP + R HR +L + Sbjct: 241 AIVSRTTISKELKLGTLKALPLDPPLNRPFSHVRQKHKFR-HRAVGELLDFAVDYC 295 >UniRef50_A9VQL8 Transcriptional regulator, LysR family n=8 Tax=Bacillus cereus group RepID=A9VQL8_BACWK Length = 291 Score = 189 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 111/294 (37%), Gaps = 14/294 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD +++ F + + +I++AAE +H+ P + + LE +G TL R L Sbjct: 1 MDF---RQLYYFKEIVKQGSISKAAEVLHIAQPPLSQLLKKLETDLGTTLIHRYRQKWEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 G+ LYQ + ++ + +I + + IG+ +T ++ D + + +Y Sbjct: 58 TATGEILYQYANQMLMQIQDVKQKIQEIEQGIGGTVSIGVSSTCSNMLIDYVSTFRTQYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V + V + ++ L R++D + R+ E + L ++ + Sbjct: 118 NVKIKIVTGNSEELLKRLEQREIDVAL-----LLRLGNSEQYEMKILKKQPTAVIIPSSW 172 Query: 180 E-----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + E + + P++ + +F + + P II ++ Sbjct: 173 ATSFSSQYVTIEQIAQFPFIMLGAMEGLSFNEDLFKVFDEHQVKPNIIIECKDIRMVVAL 232 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 V RG L+VIP + F+ ++ + +++ R + Q Sbjct: 233 VSRGLGLSVIPRMDYTSSFLEHTTLFELKQFDFQLEPVIVKLKDQRISKVASQF 286 >UniRef50_UPI0001C42298 LysR family transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42298 Length = 291 Score = 189 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 106/295 (35%), Gaps = 14/295 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++R F+ + I AA+K++M P +SI +E +IG L R + + Sbjct: 1 MDM---RQLRYFVTVVDEGQITLAAQKLNMAQPPLSQSIKKMEHEIGAKLLVRHGRKLEV 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG+ LY K + + +G + +G T + +++ + Y Sbjct: 58 TEAGEVLYSKGLQLLNTFDETLGAVRETGEGMRGTLSLGCVMTCIHQLPERVQTFHRLYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V + + + + + + R ++ I + +N+ + E+ F+V + + Sbjct: 118 QVKLKILGGDPHQLSELVESRDIELAIVRSPL-----HYKNVNMIEIANDPFVFIVPKSW 172 Query: 180 EERQEQEL-----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + E P + + N +I R GI P I +S Sbjct: 173 TDVSSLSSITMNQISEYPLIALHRVNGIGIYEIILDEFRRHGIKPKYICESPDATILLSI 232 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V+ G ++P A L Q + ++ + + I Sbjct: 233 VKAGIGAILLPESALFNFTSKDLATIKIDDFSATTQTCVIWQKDRYISKAARKFI 287 >UniRef50_O68014 HTH-type transcriptional regulator benM n=12 Tax=Acinetobacter RepID=BENM_ACIAD Length = 304 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 91/272 (33%), Gaps = 9/272 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ + + + +AA+K+ + P + I LEE++G L R + G Sbjct: 4 RHLRYFVAVVEEQSFTKAADKLCIAQPPLSRQIQNLEEELGIQLLERGSRPVKTTPEGHF 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISL-GDKYEGVTAQP 125 YQ + + + + + I IG + + ++I L + + + Sbjct: 64 FYQYAIKLLSNVDQMVSMTKRIASVEKTIRIGFVGSLLFGLLPRIIHLYRQAHPNLRIEL 123 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 E + L + ++D +S + L L + S + +++ Sbjct: 124 YEMGTKAQTEALKEGRIDAGFGRLKISDPAIKRTLLRNERL---MVAVHASHPLNQMKDK 180 Query: 186 EL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 + L + L + NF + G+ PT I + V G + Sbjct: 181 GVHLNDLIDEKILLYPSSPKPNFSTHVMNIFSDHGLEPTKINEVREVQLALGLVAAGEGI 240 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYL 273 +++P + L Y Y+ Sbjct: 241 SLVPASTQSI-QLFNLSYVPLLDPDAITPIYI 271 >UniRef50_C1DL37 LysR family transcriptional regulator protein n=2 Tax=Proteobacteria RepID=C1DL37_AZOVD Length = 312 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 112/291 (38%), Gaps = 7/291 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+++A+ + RAA +++M P + I ALEE++G+ LF R + L G+ Sbjct: 4 RHLRYFVMVAEEKHFTRAAARLNMQQPPLSQQIRALEEELGFALFLRHPKGVELTAGGEA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPT--IIFDQLISLGDKYEGVTA 123 ++ + R++ ++ + + +G ++ + +I + ++ GV Sbjct: 64 FLREAQDILARVAQGASKAARVAQGIEGMLALGFTSSATSHPLIPRIIREYRARFPGVEI 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQ-ELENLTISE-LPPLRLGFLVSRRYEE 181 E + + +++ +D + V+ E L + + L L + ++ Sbjct: 124 ALSEDNAQRLTESVTAGGIDLGVLRAPVANPAGIEFHRLLVEDMLLTLPVDHPLATDAAR 183 Query: 182 RQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 R+ L L ++ +R A + A R G P I + + +S V G Sbjct: 184 REGVPLAALARERFILVRRPGAPGMYANLIAACRNAGFEPAIAFEVERMLTNVSLVAAGA 243 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 ++V+P L +P + R + + IA Sbjct: 244 GISVVPASMKDLHRDNVAYCRLRGAKPRLVAPVTLVCRGFNQSPPLRNFIA 294 >UniRef50_C4K9T0 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4K9T0_THASP Length = 309 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 59/288 (20%), Positives = 104/288 (36%), Gaps = 8/288 (2%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + + +R FI +A+ N RAA ++H+ P I LEE+IG LF R ++L+ Sbjct: 1 MMELRHLRYFIAVAEELNFTRAATRLHIGQPPLSMQIRDLEEEIGVRLFERGPRRVALST 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP--TIIFDQLISLGDKYE 119 AG+ + + E + R E+ +G ++ P ++ D L + ++ Sbjct: 61 AGERFLLHARRILDGVEEAVAEARRAARGELGELRVGFTSSLPFTDLLPDALNAYRRRFP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V Q E L +LD + ++ P LRL + R Sbjct: 121 QVRLQLREMFTPEQFQALVSGELDVGFVRLQAGTPPAGIVLREVARNP-LRLVVNAAHRL 179 Query: 180 EERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + L L ++ + ++ A R G P I+ +I V Sbjct: 180 AGAAQVHLAELAGEDFISFPADVGTDLPGVLRALCRQAGFEPRIVQTAREATTQIGLVAA 239 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATM 285 G + V+P V A ++Y + L +IR T+ Sbjct: 240 GLGVAVLPA-PLESVRIARVRYLALAEPEAQFRLAL-AIREGEPVPTL 285 >UniRef50_Q49UH5 Transcriptional regulator n=2 Tax=Staphylococcus RepID=Q49UH5_STAS1 Length = 295 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 109/284 (38%), Gaps = 18/284 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ + M+ F+ + + ++ +AA + +T +I LEE++ LF R N I L Sbjct: 1 MEL---RHMQYFVEVVKQKSMTKAASNLFITQPTISNTIKLLEEELDVNLFNRYKNQIYL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYP-TIIFDQLISLGDKY 118 AG+ + + + + I NE+ N + + IGI + + + Y Sbjct: 58 TDAGEAFFFQCKEMLKMYDNIPNELSNLLELKKGHLKIGIPTIINIRRLIGLISEFHEMY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 +T Q E + ++++ LD I+ + + N I +L +V + Sbjct: 118 PNITFQLFENGSKKIENDVYYGDLDMGITVLPTNNK-----NFDIFSFLEEKLKLVVHKN 172 Query: 179 YEERQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 +E + + E LQE ++ F + I R G NP II+ + Sbjct: 173 HELSKKTKIDIEDLQEQEFI--LFNSDFYLNDKIKNTCRNYGFNPNIIFETTQWSFIEEM 230 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRN 278 + + ++P L++ L+ D P E R Sbjct: 231 LLNNLGICILPEGILGLLDN-NLQAIDINE-PSMKWELGIIWRK 272 >UniRef50_C6Q0M3 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0M3_9CLOT Length = 311 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 113/297 (38%), Gaps = 17/297 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD ++++ + +A+ N ++AA K+ ++ + I +E ++G LF R + + L Sbjct: 1 MDF---RQLQYVLTVAEEKNFSKAAHKLFISQPSLSQYIQKIELELGTQLFDRSSSPLKL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGIDNTYPTIIFDQLIS-LGDKY 118 AG+ + + + +I++ R+ ++IG+ T I +++ DK+ Sbjct: 58 TFAGELYIETAKNILDLKDQLYQQINDIANRKKGRVIIGLSPVRSTYIMPKILPIFHDKF 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISEL-----PPLRLGF 173 + +E + + D + + + + E + E+ P + Sbjct: 118 PDIEVVLIEDISSTLETLAVKGSTDIDLITTPMKNDMLDFETIFSEEILVVIPPNHPIQS 177 Query: 174 LV-----SRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSF 228 + ++ E + L+ P++ ++ + M + G +P II S Sbjct: 178 KIKYKTSAKSTHPTIELKELKNEPFILLKRDQK--LHKMATSLCEQAGFSPRIILESESI 235 Query: 229 MAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATM 285 A + + G +T +P + + + ++ + + + RY + Sbjct: 236 EAAHALAKAGMGITFVPDTLISAHQTEPYPLYCSIDKLRPTRDVIVAYKKGRYLSVA 292 >UniRef50_B0CAU2 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CAU2_ACAM1 Length = 291 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 14/266 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD++ ++R F+ +A+T +RAAE+++++ I LE+++G LF R L Sbjct: 1 MDLY---QVRYFLTIAETGTFSRAAERLYLSQPSLSAGIKKLEQELGVALFERGGRRTVL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTY-PTIIFDQLISLGDKYE 119 AGQ ++ + + A +E+ R + +G+ +T + + D + S Y Sbjct: 58 TAAGQAFKERATVIMAQYQAALHELKGFNDRP-TLKVGVLSTLRVSELADLVHSFQQHYS 116 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 VT + + + + D L ++D I+ V + + T+ PL L Sbjct: 117 HVTLELYDHPADALQDKLTQGEIDVAIT---VLGPQDDAQTSTLLFAQPLLLAVPARHPL 173 Query: 180 EERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 +R L L P++ F + I P ++YR IS V+ Sbjct: 174 AQRTSVRLAELDGQPYIDRV---NCEFFKQECQLLEAKKICPQVVYRASHEEWVISLVKA 230 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAP 263 G L+V+P + L + L D Sbjct: 231 GLGLSVMPFW-RGLTDIVYLPVVDID 255 >UniRef50_C0D3N8 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3N8_9CLOT Length = 297 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 113/282 (40%), Gaps = 10/282 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD SK+++ + +A+ NI RAAE++H++ I+ EE++G +F R ++L Sbjct: 1 MD---SKQIQYILKVAECQNITRAAEQLHVSQPALSHFISKAEEELGAKIFNRGTTPLTL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFD-QLISLGDKY 118 +AG+ + + + EI + + R EI +G+ + T + L Y Sbjct: 58 TQAGEHYVKTARMMMALEENLKQEIDDLNNSRDGEIRLGLSDMRATSLLPFALPEFRRLY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 VT + VE V DN+ + +D I P + L EL + L R Sbjct: 118 PNVTIKTVESGSRTVEDNVRNGVVDLGIIPLYDYGEDLCARVLYDEELLLVSSEDLPCER 177 Query: 179 YEERQ--EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 R + E + + + NR +DA G+ P + + M Sbjct: 178 GNVRPWVDIEEVTGRDFALLTGDNR--LRRAVDAVFLEHGVKPRTVMESRNNMTVYMLAT 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRN 278 G L ++P R++NP + + + + + +IR Sbjct: 236 SGMALAIVPETVVRMMNPVRIPRIYSIGKSGFHWN-IGAIRR 276 >UniRef50_B1ZCQ9 Transcriptional regulator, LysR family n=3 Tax=Rhizobiales RepID=B1ZCQ9_METPB Length = 311 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 103/296 (34%), Gaps = 12/296 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M + + R + +A+ + RAA+++ + + I LEE+ G LF R + L Sbjct: 1 MVLMELRHFRYALAVAEELHFTRAAQRLGIAQPALSQQIRQLEEEFGTQLFHRLTRGVEL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP--TIIFDQLISLGDK 117 +AG+ L + + + ++ IG + ++ + D Sbjct: 61 TEAGRALLPYARAALAAADEGTAAVRRAAKGELGQLRIGFTGSASFNPVVSGTIGRFRDA 120 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 Y V E + ++ +L + ++ A E + L LP L + Sbjct: 121 YPEVELDLQEQVTSMLLRSLREGRIQLAFGR----AADDETDGLRRIALPEESLWAALPA 176 Query: 178 RYEE----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 ++ R + L P++ N I A G +P I+ + ++ Sbjct: 177 KHRLAGAGRIDLASLAADPFILYPRANGRLLYDAIVAACGRAGFSPRIVQEAPQMASTVN 236 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V G + ++P RL+ ++ Y + L + TA++ I Sbjct: 237 LVAAGVGVALVPASM-RLLQAPSVSYVELSTPGTVASLSLVQGPDLLMTASVRNFI 291 >UniRef50_UPI0001C35EAB LysR family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35EAB Length = 291 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 103/290 (35%), Gaps = 7/290 (2%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M S+ + F ++A+T + AA+K+ ++ P K I LEE +G L R L Sbjct: 1 MGQMNSRHLYYFTVIAETGSFTAAAKKLGLSQPPLSKQIMMLEEDLGVRLLNRGARKAEL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQ-LISLGDKY 118 +AG LY + + + +E+ N + +G ++ + D+ L + Sbjct: 61 TEAGAYLYSRARDILSMMDTAASELQNFPSSAKGILKLGTISSSGDYLADRVLPGFCRLH 120 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + E + +++ L + ++ + + + L + +E P +G + S Sbjct: 121 PNVRFEISEGNTYELLEKLKNGIIECAVVRTPFN--TEGLHCVFGTEEPLTAVG-VASWF 177 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 L +L + + R F+A+I + G P I R + G Sbjct: 178 DALPDGSIRLTDLAGKPLIYYRR--FDAIISMAFQNIGAVPDIFCRNDDARTCLQWAGAG 235 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 + ++P + L + +N + + Sbjct: 236 LGVALVPESISSMKTAEGLTVRTIDSPETVTRMTAIYKKNGYVSNIAKEF 285 >UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7X5_ACIC5 Length = 305 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 119/295 (40%), Gaps = 14/295 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 I + +R F+ +AQ N RAA+++H++ S I LEE +G LF R ++L Sbjct: 2 INELRHIRAFLAVAQHANFTRAAQELHVSQSALTVQIQQLEEALGVKLFDRNKRRVALTD 61 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPT-IIFDQLISLGDKYEG 120 AG+E+ L + AI + +G R + + + + + I+ L + G Sbjct: 62 AGREVIAPLQRIVVDAEAIVSRTREITGLRRGVLSMAVLPSMASGILSTALSRFTAAHPG 121 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + + + VI+ + ++DF ++ + + LT+ L RL + ++ Sbjct: 122 IMIHIHDVVADQVIEKVKKEEVDFGVATV-----MHADKELTLMPLFTDRLFAFLPEQHP 176 Query: 181 ERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + + + P + M + +M+D +R G+ T Y +S V Sbjct: 177 LSSRASVSLQQISDYPLVLM--ARGTSVRSMVDQALRDHGLTATAAYEANYMSTALSLVR 234 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 G + ++P A + + L RP + +R R + +Q + + Sbjct: 235 AGFGIGILPEDAGTMGSAQNLVALPI-VRPQLTRPIHVLMRKGRSASPAVQQMLQ 288 >UniRef50_D0J1D7 Transcriptional regulator, LysR family n=12 Tax=Bacteria RepID=D0J1D7_COMTE Length = 306 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 107/267 (40%), Gaps = 7/267 (2%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++++ F+ +A+ ++ RAAE++H++ SP + IA LE+++G LF R I L + Sbjct: 1 MLDIRQLQYFVAVAEEEHVGRAAERLHISQSPLSRQIAQLEDKLGLVLFERSQQRIRLTR 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDN--TYPTIIFDQLISLGDKYE 119 G+ + + + +++ GR + IG + ++ + L LG Sbjct: 61 DGRTFLAETRALLTHANRLESLGRRLGRGDEGGLCIGYLEYAMHSGVLPNALRELGQGRP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V + ++ L R LD + + +LE + P L L Sbjct: 121 AVHIALYNQQSDAQLEGLRQRSLDIALVCEPPQPDDPDLEAAQVLNDPML-LAVPKGHPL 179 Query: 180 EERQEQE--LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 E+Q+ E L + W+ ++ + A + A G PTI +A + V Sbjct: 180 AEKQDIEPADLAQQRWIGVKHKESALRHDTLIAACAKAGFTPTISMEATEPLAALGLVAA 239 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPH 264 G +T I + R P + + Sbjct: 240 GLGVTTI-QQSLRHQTPEGVMLRELSW 265 >UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus subtilis group RepID=Q65GU9_BACLD Length = 299 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 107/290 (36%), Gaps = 10/290 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+++ ++ +FI +++ + +AA + ++ +SI LEE++G LF RK +I L Sbjct: 1 MELY---QIDHFIAVSRHKHFTKAALEQRISQPALSRSIKKLEEELGVPLFIRKTKSIRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLIS-LGDKY 118 K G++ K L +I S + EI + +T + + QLI+ KY Sbjct: 58 TKYGEQFLIKAKQARLALDEGVQQIRESVNPNAGEISVSFLHTLGSRLMPQLIAEFKKKY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + + + + + + D +S + E L PL L Sbjct: 118 PNVAFRLYQAANEHLQHMVETGEADICLSSPPLPNEHLEWTVLDTE---PLYLVLPADHP 174 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 +R+E + + F+ + D R I+P + + + V G Sbjct: 175 LADRKEVAIRSIAHEDFVCFKPGYGLRYVFDQMCRGLSISPKLAFEGEEVSTILGLVSAG 234 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 + ++P A + +P + + ++H + Sbjct: 235 LGVAILPKTAEHVHSPVAFCRVSDYRSERTIGLAVL--KDHYLSPAARNF 282 >UniRef50_Q1IBR2 Putative transcriptional regulator, LysR family n=1 Tax=Pseudomonas entomophila L48 RepID=Q1IBR2_PSEE4 Length = 293 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 91/248 (36%), Gaps = 2/248 (0%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++ +R F+ +A+ + RAAE++HM P ++IA LE+++G+ LF R + L Sbjct: 1 MIETRLLRQFVAVAEELHFHRAAERLHMAQPPLSQAIARLEQRLGFILFQRHSRGVRLTP 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYP-TIIFDQLISLGDKYEG 120 AG +L Q L + + ++ + IG + D L ++ Sbjct: 61 AGTQLLDTARATLQGLELGVQQARRIAQGQAGALRIGSLALAGHPPLLDGLKRFRQQWPD 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V + S + L D QLD + + ++ E L L R Sbjct: 121 VELSLQQASSAQLARMLLDEQLDLAVLRDVPELDERLQRHMWHEEPLLLALPADHPRADA 180 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + P++ + + + G +P I+ S V G Sbjct: 181 SSVALADFADEPFVFTPRSLGSRYHQHLLELCLDAGFSPRIVQEAAQLQTVASLVACGFG 240 Query: 241 LTVIPHFA 248 + ++P A Sbjct: 241 VALLPESA 248 >UniRef50_A9KLP8 Transcriptional regulator, LysR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLP8_CLOPH Length = 299 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 106/254 (41%), Gaps = 15/254 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ K+++ F+ + + NI++AA K+H+T P + LE ++ TLF R I L Sbjct: 1 MDL---KQLQYFVTVVEEGNISKAAAKLHLTQPPLSTQLKCLENELSVTLFERGSRKIEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP-TIIFDQLISLGDKY 118 + G+ LY + + + E+ + S + IGI ++ + +++ + +Y Sbjct: 58 TQEGKILYARAQSILELTELSKKELLDYSCGSLGTLHIGIVSSVVDSFLYNLMPDFHKQY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + + E + I L + ++ I A E+L+ L + +R Sbjct: 118 KEIRYDLFEGNTYEQIQKLRNNLIELAIVRTPYQA-----EDLSTLVLKKESMMAFGHKR 172 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 Y ++ + + L + P + R +E +I I P I +S G Sbjct: 173 YFQQMDIKSLLQQPLILYR-----RWEKIIYDLCHSYSITPNIFCMNDDARTTVSLANEG 227 Query: 239 HFLTVIPHFAWRLV 252 + + +IP A ++ Sbjct: 228 YGIGIIPESAGLII 241 >UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Bacillus RepID=A8FC52_BACP2 Length = 291 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 112/290 (38%), Gaps = 18/290 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I + + FI + Q +I +AAE +++T I +LE+++ LF R+ N +SL Sbjct: 1 MNI---ENIEAFIYVCQLGSINKAAEALYLTQPSVSARIQSLEKELDLKLFDRQRNKLSL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFD-QLISLGDKYE 119 + G++ Y + + + + E+ IG ++ + L +L +KYE Sbjct: 58 TEKGEQFYPHAKKILHSYQEAKHSLKQT-MIPYELTIGCASSISNNLLPNILPALKEKYE 116 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 + + V V+ + + Q+DF I +++ + + +G V + Sbjct: 117 NLKVKIVTGHSKDVVQKVINNQVDFGIVRTETHPQIESI------PIFSDPIGLFVPTYH 170 Query: 180 EERQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + L+E P++ + + M+ + I P I + V Sbjct: 171 PLASLDNINMKELEEQPFIFFDYGSFDWL--MLHRLFQKNNITPNISIEVDHMETAKNLV 228 Query: 236 ERGHFLTVIPHFAWR-LVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTAT 284 +G L+ +PH R V TLK + + + + + Sbjct: 229 LQGMGLSFLPHHCVRNEVEQGTLKQISIDPSIHFNINIEFIYKKGKSKSV 278 >UniRef50_C1D4D4 Transcriptional regulator, LysR family n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4D4_LARHH Length = 304 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 104/279 (37%), Gaps = 9/279 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + +R F+ + + + RAAE++ +T K I +LE+ +G L R I Sbjct: 3 MDL---RALRYFVAVVRLASFTRAAEQLFVTQPTISKMIRSLEDSLGEPLLVRDGRQIRP 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISLGDKYE 119 AG + + + + S + ++ G ++ +GI ++ L S ++ Sbjct: 60 TAAGSIVLEHAERMLREASHLHEDLAGLRGLTHGQLCLGIPPMVGPLVVPLLASFRARHP 119 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 G+ + E + + ++D IS VS L +++ P + S Sbjct: 120 GIRPRFTESGGLALEAAVSRGEVDLAISVLPVSDD--SLAVAPMADYPLWAVLPGGSPPV 177 Query: 180 EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 L + P++ +++ I A R G P + + + V G Sbjct: 178 PSPLPLAALHDQPFV--LYEDDFVLTGRILAACRQRGFVPAVAGQSRHWDFIGELVAAGT 235 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRN 278 + ++P ++PA ++ + P + R Sbjct: 236 GVALLPSPVASRLDPARVRCVELDE-PDLRWRLGWVWRE 273 >UniRef50_B4ETB5 LysR-family transcriptional regulator n=7 Tax=Enterobacteriaceae RepID=B4ETB5_PROMH Length = 297 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 116/290 (40%), Gaps = 16/290 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + +R FI + Q N +RAA+ + +T +SI LE+++G L R+ + + L Sbjct: 1 MDI---RVLRYFIEVVQLNGFSRAADALFITQPAISRSIKKLEDELGTVLLIREVDGVKL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYP-TIIFDQLISLGDKY 118 G LY+ + + ++++ +++ + + +G+ T D +++ ++ Sbjct: 58 TDDGAILYEHAKQILAQFNSMNKALNDKDEPLTGALNVGLPPVIASTYFADIIMAFSSRH 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + E + D + + ++ + + EL + L LV++ Sbjct: 118 PNVELKIFELGTKQMEDAMLEGTVETAAVMLPFNDKDFELTIFS-----EDHLMLLVAQS 172 Query: 179 YEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + +++++ L ++ R N ++ + P I+ R I+ Sbjct: 173 HPLAKDKKVNFKQLITERFIFFSEDFRIN--DLVRSACGIYNTEPQIVGRSNHLDLIIAM 230 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTAT 284 V+ G +T++P+ L + Q L + +N + + Sbjct: 231 VKAGVGITLLPNSMCNKYPIDDLVVIPITSPRLSYQLALATNQNSYQSRS 280 >UniRef50_Q7W708 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W708_BORPA Length = 298 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 106/297 (35%), Gaps = 16/297 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ K+MR F+ +A+ + +RAAE++H++ P + I ALEE++ LF R ISL Sbjct: 1 MDL---KQMRYFVAVAEERSFSRAAERLHISQPPLSQQIKALEEELNAPLFHRLPRGISL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIG-IDNTYPTIIFDQLISLGDKY 118 AG L + + + E + +G + + ++ L + Sbjct: 58 TAAGAALLKSSRAILANVRLAAQETTQIAAGMLGTVRMGTVSSALAHLVPYILTQVKRSM 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 G + E S + +LD + + + +L ++ V + Sbjct: 118 PGSKVELTEMSSREQTLAVLRDELDIGLVHTPI-----DTADLRTRQILREPFYAAVPSQ 172 Query: 179 YEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + + L ++ + + + G +P I + + Sbjct: 173 HPLASREAVPVAELASEEFVFFPRTLASGLFDKMVSLCMNAGFSPKIHHTARHQSTMLQM 232 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 V G +T++P R+ + + P Y++ L R + + I Sbjct: 233 VAMGLGVTIVPRSLQRIYK-GSAVFLPLTGTPHYLELSLI-WRESTANGLVERLIGG 287 >UniRef50_C6DI39 Transcriptional regulator, LysR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DI39_PECCP Length = 308 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 105/267 (39%), Gaps = 11/267 (4%) Query: 2 DIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLN 61 D + K++ F+ +A+ + RAA ++ M+ P + I LE+ + TLF R +L+ Sbjct: 5 DYRLIKQLYLFLAVAEEEHFGRAAARLGMSQPPLTEQIKILEQSLKLTLFERSRRGTTLS 64 Query: 62 KAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIG-IDNTYPTIIFDQLISLGDKYE 119 AG+ + ++ +++++ + + I IG I + ++ + L Y Sbjct: 65 PAGKAILPQVKRFVDHMASLEKMVKEVAQGKVGVIHIGAITSAMFDVVPEFLNYFKHHYP 124 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 VT E I +L +LD + L L LG + + Sbjct: 125 DVTVFVNEIDSAEAISSLLSGKLDMAFVRVEGDIG----QTLKSIPLTEDLLGVALPVEH 180 Query: 180 EERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 E+ L++ ++ + + ++ + R G NP I+Y S A+I+ V Sbjct: 181 PMSCNNEIRLGDLKDEAFVMSSRRVNPTYFDILTSACRENGFNPRILYEVRSVTAQIAYV 240 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDA 262 G ++P R + P ++ Sbjct: 241 SCGQGAALVPLSMSRFI-PGNVRLIPL 266 >UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=Verrucomicrobiales RepID=B9XBB1_9BACT Length = 299 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 101/287 (35%), Gaps = 9/287 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A+ + RAAE++H+ P I LE ++G LF R ++ L +G+ Sbjct: 4 RHIRYFVAVAEELSFRRAAERLHLAQPPLSAQIKDLEGELGTKLFERTTRSVRLTASGRV 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGI-DNTYPTIIFDQLISLGDKYEGVTAQ 124 + V + + + + IG+ T + + L S +++ GV Sbjct: 64 FLDEARAVLAAAEKAEQRVRKAEHGLVGTLRIGVLAPTATSRLATILRSYRNQFPGVQFS 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ- 183 E + + +L QLD + V+ + L E P+ L R +++ Sbjct: 124 LHEMTSVEQLQSLRLDQLDVGLLRPPVAFPELDFHFL---EESPMVLAVPAGHRLAKQRL 180 Query: 184 -EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 E + P + + + + G P + +K+ + G + Sbjct: 181 IEWKDFHNEPMVMIHPSLQHGYYDTFLNLCAKAGSTPIVGQYANDVHSKMWLISAGFGVA 240 Query: 243 VIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + P + P P+ + L + + + I Sbjct: 241 PTTKTIAEVKRPGLVFRELPPGLPLV--QTLIVWKRTNNSPMVGNFI 285 >UniRef50_P94387 Uncharacterized HTH-type transcriptional regulator ycgK n=2 Tax=Bacillus RepID=YCGK_BACSU Length = 324 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 103/295 (34%), Gaps = 36/295 (12%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI K M +A+ + +AAE +H+ + I LE ++G TLF R +++L Sbjct: 1 MDI---KVMEYAAEIARRQSFTKAAEHLHIAQPSLSQQIKKLEAELGLTLFHRSHGSVTL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSRE-IVIGIDNTYPTIIFDQLI-SLGDKY 118 G+ +K + + + E+ + + IGI +F L+ +Y Sbjct: 58 TPHGRRFIEKAEDIIRSRDDLLREMQERSQGIGHKLSIGIPAVTGRYLFPPLLKQFLARY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V Q VE + ++D + + E E L+I+ L + V + Sbjct: 118 PHVEVQLVEKDPVSLEKMTAKGEVDLSVLSLPI-----EDERLSITPLLTEPVVLAVPKE 172 Query: 179 YEERQEQELLQ----------------------ELPWLQMRFQNRANFEAMIDANMRPCG 216 + EL+ +P++ ++ F + G Sbjct: 173 KQRWMPPELVALIEKALEEDEGRQPCVPIDMVRNVPFILLK--EGFGFRRTVLDLCAESG 230 Query: 217 INPTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPA--TLKYFDAPHRPMYM 269 P ++ S V G +T+ P+ R +P L AP R + Sbjct: 231 FKPNAAFKTSHIETAQSLVANGLGVTMAPNMVRRDKDPGVIYLSIQSAPSRTLVF 285 >UniRef50_Q97DV9 Transcriptional regulator, LysR family n=1 Tax=Clostridium acetobutylicum RepID=Q97DV9_CLOAB Length = 312 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 113/299 (37%), Gaps = 22/299 (7%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD ++ +A+ +I+RAAE+++++ + I LE +G LF R I+L Sbjct: 1 MD---FRQFEYVKTIAEEKSISRAAERLYISQPSLSQYIIRLENSLGVKLFDRTSATITL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLI-SLGDKY 118 AG++ + + + + E+++ S ++IG+ + I +I +Y Sbjct: 58 TFAGEKYIETARNIINLNNQLTKELNDIANLSKGRVIIGVPSQAGRYILPLVIPKFYKEY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + E + + L + ++D I V + E +T + R+ + ++ Sbjct: 118 PNIEIIVEENIVSELEKMLLEGKIDIAILTLPV-----QHEKITYESIMNERIFLIAPKK 172 Query: 179 YEE-----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 + R ++ ++ ++ R ++D G P II + A Sbjct: 173 HPICSVDGRISFNFIRNEKFILLKKGQR--IRLIVDDIFSRIGAKPNIILEITNLDAAYR 230 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKY-FDAPHRPMYMQEYLYSIRNHRY-TATMLQHIA 290 G T++P L+N + F + + + R Y T + IA Sbjct: 231 MASSGMGFTIVPENVLYLLNTNGKENDFIIDSLEHTL---VVAYRKGEYLTRASREFIA 286 >UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PT5_RALEJ Length = 300 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 102/287 (35%), Gaps = 16/287 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ + +++R F+ +A++ AA K+H+T S I LE Q+G L R +L Sbjct: 1 MNVTL-RQLRAFVEVARSGGFTAAAPKLHLTQSATSLQIRELESQLGLQLIDRSTRRFAL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQ-LISLGDKY 118 AG E + + + +R I + + + + + D Y Sbjct: 60 TDAGSEFLISAMRIVGDVEQSVADTRELVHKRRGRITVATTPLLASTLLPESIAHFLDAY 119 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 +T + + + + +DF +E L LG +V Sbjct: 120 PAITVRIADLPAEQIGRRVLSGDVDFGFGVFP-----EEDPQFDRIPLLRHPLGVMVPSS 174 Query: 179 YEERQE-----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 + L+ P + M + +ID + G+ + + Sbjct: 175 WPLATRKRDLVWSDLEGQPLIAM--SHATGMRTLIDQQLHQAGVQVNPRFEVAYLGTAVG 232 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHR 280 E G +TV+P + +L+ ++ F H+P+ ++ +R R Sbjct: 233 LAEAGLGVTVVPAYVGKLMGSDRVR-FRPLHKPVVHRQIELIVRAGR 278 >UniRef50_B8IDW8 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IDW8_METNO Length = 305 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 111/273 (40%), Gaps = 12/273 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++R F +LA+ + RAA ++ ++ P +I LEE++G TLFTR ++L Sbjct: 1 MDL---RQLRYFAVLAEERHFGRAARRLSLSQPPLSHAIRQLEEELGATLFTRTSRQVAL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGID-NTYPTIIFDQLISLGDKY 118 AG L ++ + QR + +H+ R + IG +T + L ++ + Sbjct: 58 TPAGTALQREAKAILQRAADARVLVHDIACGRRGRLRIGFSGSTVYRGLSHILTAMRTEA 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPP---LRLGF-L 174 + E + ++ L +LD H+ R + L+ + P L +G + Sbjct: 118 PDIKVALREMNSAEQVEALLHDELDAGFV--HLRERPEGLDGILFHAEPFVTCLPVGHPM 175 Query: 175 VSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + LQ ++ ++ I A R G P + + ++ + Sbjct: 176 AATPDPSETRLIDLQHEDFVLFSRTVSPDYYESILAICRTAGFLPRVRHEVRHWLTVAAL 235 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPM 267 V G + ++P A A + + P P+ Sbjct: 236 VAHGAGVALVPQ-ALAGSQLAGVVFLPIPPSPI 267 >UniRef50_C9KMN5 Transcriptional regulator, LysR family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMN5_9FIRM Length = 310 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 117/301 (38%), Gaps = 20/301 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I + + +T +I+RAAEK++++ + + ++E+++G LF R + Sbjct: 1 MEI---RHFHYIRTIYETGSISRAAEKLYISQPSLSQLLKSVEKKVGAPLFDRGSQPLRP 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIF-DQLISLGDKY 118 GQ+ + + + + + + G +V+G T L +KY Sbjct: 58 TTIGQKYLETAQRIMELDTEFHRYVEDELGCAQGNLVVGSSPFRSTYFLASFLPEFQEKY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELP-PLRLGFLVSR 177 G+ Q E + + + + D II+ Q V A L E+ L G +S+ Sbjct: 118 PGIRLQLAEHTSKRLEEAVLSGDADLIIATQPVDANAFSFAELYSEEMVLVLPAGHELSK 177 Query: 178 RYEERQEQE---------LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSF 228 +Y Q+ LL++ P++QM + + + + G P I + S Sbjct: 178 QYHLPQDCRGTLPLLPIGLLKDTPFIQMHSEQK--LHQQLLSLCEEAGFTPKIYLQTRSM 235 Query: 229 MAKISAVERGHFLTVIPHFAWRLVNPATLKYF-DAPHRPMYMQEYLYSIRNHRYTATMLQ 287 ++ G T++P R P T + P RP + L + R Y + + Sbjct: 236 ETALTLAAAGLGATLLPMTLLRAFQPKTRPCYAALPTRP--RRHALVAWRKKSYLSHAAR 293 Query: 288 H 288 Sbjct: 294 A 294 >UniRef50_Q3JWC0 LysR family regulatory protein n=26 Tax=Burkholderia RepID=Q3JWC0_BURP1 Length = 322 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 102/294 (34%), Gaps = 12/294 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + +++R FI++A+ + +AA+++H+ P + I+ALE ++G LF R ++ L Sbjct: 16 MIDLRRLRYFIVVAEELHFGKAAQRLHLAQPPLTRHISALEGELGLRLFDRSTRSVKLTA 75 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYP--TIIFDQLISLGDKYE 119 G+ V + + + + ++ +G ++ P + + + Sbjct: 76 EGELFLPHARDVLDAVHRAEIASQRAALGKEGKVALGYTSSVPLCDAFGTLIRNFARSFP 135 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 + VE S ++ + LD I ++ ++ E + + L VS+ Sbjct: 136 DIELSLVEASSAQQGRSIKEGLLDIGIGWKNS---FEDYEGCRVKTIAAEPLVVAVSQER 192 Query: 180 EERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 E L L + ++ + + G P I+ V Sbjct: 193 ALASEASLAVEQLADETFVLFPPGYGSTLDRKAFDLCATAGFTPRRGPSASQMTTMIALV 252 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + ++P A + + Y ++ L R + + Sbjct: 253 AAGRGVAIVPE-AVSTLRKPGVAYVPLTDESALIELVLM-WREAGLSLAARSFV 304 >UniRef50_A5FB04 Transcriptional regulator, LysR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FB04_FLAJ1 Length = 295 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 104/248 (41%), Gaps = 7/248 (2%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ + ++ F+ +A+ N +A+EK+ ++ P + IA LE+++ LF R + + L Sbjct: 1 MEL---RHLKYFMAVAEELNFTKASEKLFISQPPLSRQIAELEDELQAKLFIRNNKKVEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLI-SLGDKY 118 +AG+ +++ ++Q L I + S E I ++ + I LI L ++ Sbjct: 58 TEAGKYFEKEVIELFQNLERISIKTKKIAENVSGEFRIAYISSIYSSIISDLIKHLKSQF 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + E S ID L +++ I + + + + S + Sbjct: 118 PYVNFKLFEISTTKQIDALEQGKIEMGIIRSPIQSPKIKSHLWFKDGFS--LVYNKKSVQ 175 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + E L++ ++ ++ ++ G P II+ + + + V+ G Sbjct: 176 IKSENEIANLKDETFVFFNKDYAPHYHEVLLELCAFYGFTPQIIHEANNINSIVQLVKNG 235 Query: 239 HFLTVIPH 246 ++++P Sbjct: 236 LGISIVPS 243 >UniRef50_Q390Q2 Transcriptional regulator, LysR family n=6 Tax=Bacteria RepID=Q390Q2_BURS3 Length = 294 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 117/297 (39%), Gaps = 17/297 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + +R F+ +A+ + RAAE++H+ I ALE+++G LF R ++L Sbjct: 1 MDL---RHLRYFLAVAEEGHFGRAAERLHIVQPALSMQIRALEDELGTALFERSTRKVAL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGI--DNTYPTIIFDQLISLGDK 117 AG+ L + ++ + + R + + IG + + D LI+ Sbjct: 58 TDAGRLLVTEARHTLEQAERAKAVVQRAARGETGVVRIGFVGNAVATGRLSDDLIAFHAA 117 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 + VT E + + + +LD P +A + L + + ++S Sbjct: 118 WPEVTLDLHEMAPAAQQEAILAGRLDIGYCPAFGTAFDPK---LAVRTVGNWAWDVMMSD 174 Query: 178 RYEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 R+ +++ + L + P++ + I + G P I ++ S ++ ++ Sbjct: 175 RHALAKQRSVSVAALADEPFIFYAADGDDEGQLAILRQV--LGKAPRIAHKVSSTLSVLA 232 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 G + ++P R+ P + A P E + R + Q++A Sbjct: 233 LTGAGLGVALVPSPLSRIAAPNIVYRKLAGGVP--GSELVAISRIGAEWGAVRQYLA 287 >UniRef50_Q03CT2 Fhu operon transcription regulator n=4 Tax=Lactobacillus casei group RepID=Q03CT2_LACC3 Length = 292 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 99/250 (39%), Gaps = 13/250 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ K++ F+ +A+ + AA+++HM P + ALE+++G LF R + L Sbjct: 1 MNL---KQITYFLAVAEAGQMTAAAKQLHMAQPPLSYQLKALEDELGVRLFERGSRGVRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQ-LISLGDKY 118 +GQ+ + + ++A +N SG + +G+ ++ ++ Q L + +Y Sbjct: 58 TGSGQQFMTYAQQIVETVAAAENAARRSGEGEIGTLALGLTSSAGDVLPKQKLQAFNRRY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V E + G++D L LD I + L + +S + + S+ Sbjct: 118 PQVEFALYEDNTYGILDKLRRNILDLAIVRTPFNDD--GLASCRLSSDHMIAVAA-ASQP 174 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 L++ P + R F ++ GI P I + + G Sbjct: 175 LPATLTIPDLKQQPLIVYR-----RFSSLFKTTFAEYGITPIIAVLCDDARTALHWAQMG 229 Query: 239 HFLTVIPHFA 248 + ++P Sbjct: 230 MGVALVPATM 239 >UniRef50_B2JSK1 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JSK1_BURP8 Length = 299 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 107/277 (38%), Gaps = 9/277 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + + + L +T + RAAE++H++ P + IA LEE++G LF R + L AG+ Sbjct: 4 RHLHYLVTLGETLHFGRAAERLHISQPPLSRQIALLEEELGVGLFDRTSRTVKLTAAGEG 63 Query: 67 LYQKLFPVYQRLSAI-DNEIHNSGRRSREIVIGIDNTYPTIIFDQ-LISLGDKYEGVTAQ 124 Q + + N I + + +G I L + +Y V Sbjct: 64 FLQDAKEILASVERAKRNAISANLGHRGSLSLGFMFAAAFSIAPAILRAYTTEYPEVHLH 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELP---PLRLGFLVSRRYEE 181 E + +I +L + +LD + + + +E LT+ E P L L +S + Sbjct: 124 VGEAVPSLLIQDLRESRLDVGLM--YPPGEMAGMETLTVFEEPLVAALPLNHPLSGSD-D 180 Query: 182 RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 + L++ +L R + F I + + G P I+ V +G + Sbjct: 181 PIDAVDLKDEQFLITRREASPYFHDTIINHCKTEGFVPKTFLETNYQHTLITFVGQGLGV 240 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRN 278 ++ + P +K+ + P ++ RN Sbjct: 241 ALVHRSMQTSL-PTNVKFRPLRNPPTVKLNATWNSRN 276 >UniRef50_B1J8H5 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J8H5_PSEPW Length = 323 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 88/247 (35%), Gaps = 2/247 (0%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++ +R FI +A+ + +AA ++HM P ++I LEE++G++LF R + L Sbjct: 1 MIETRLLRQFIAVAEELHFHKAAIRLHMAQPPLSQAINRLEEKLGFSLFLRNKRGVKLTA 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVI-GIDNTYPTIIFDQLISLGDKYEG 120 AG + + + L N ++ I I Y + + L + Y Sbjct: 61 AGMAFLETAYRTLKELEQGIEYARNVSEGICGKLTITAISIAYYESLLNTLKKFREIYPN 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E L + D + L ++E + L ++ ++ Sbjct: 121 VRLTIREMPSASQAKALMAGEADIGFMRKLPMPPDTIESRLLLNEQIVMALPANHAKAHQ 180 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + E ++ + + + + A G P ++ I V G Sbjct: 181 PMVDLRDFAEEDFVFTPQALGSGYHSQLIALCESAGFYPKVVQEAAQIHTLIGLVACGFG 240 Query: 241 LTVIPHF 247 + ++P Sbjct: 241 VALVPES 247 >UniRef50_C6PMR8 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMR8_9CLOT Length = 297 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 101/272 (37%), Gaps = 14/272 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I ++ + LA+ + ++AAE++H++ S K I+ LE ++G LF R +I L Sbjct: 1 MNIDT---LKYVLALAEYQSYSKAAEEMHISQSSLSKQISKLEGELGVKLFDRTTRHICL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTI-IFDQLISLGDKY 118 AG E + + + + + + E+VIG + ++S KY Sbjct: 58 TVAGSEFLRHAAKILNDIDEAEKAMQEYCIIQRGELVIGTIPVICYFGLASLIVSFQKKY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 G+ + E +I + ++D + + + + + + + Sbjct: 118 PGIKLKLKEAETKLLIQLRKNLKIDAAFVT--FTDDTELNSTFELFPIITDHIVLVTPQF 175 Query: 179 YEERQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + + + ++ M + A + + G P I+Y + Sbjct: 176 HPLAAYKSVDFKDIANEKFVSMTNNSLAT--EIFINACKKAGFTPDIVYESDHIDMIVGF 233 Query: 235 VERGHFLTVI-PHFAWRLVNPATLKYFDAPHR 265 V G ++++ A + +K + + Sbjct: 234 VSGGLGVSLLTSQIAKKFTKGNNIKIVNLNEK 265 >UniRef50_Q47141 Hca operon transcriptional activator n=46 Tax=Gammaproteobacteria RepID=HCAR_ECOLI Length = 296 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 98/289 (33%), Gaps = 12/289 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +AQ N RAAEK+H + I LE +G L R ++L AG+ Sbjct: 4 RHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAAGEC 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQP 125 Q + ++ + R++ IG + + +++ + + Sbjct: 64 FLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDTLIEL 123 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 V + + +LD + V + + EL L ++ + E+ Sbjct: 124 VSLITTQQEEKIRRGELDVGLMRHPVYSPEID-----YLELFDEPLVVVLPVDHPLAHEK 178 Query: 186 EL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 E+ L + ++ + ++ A P I+ + + ++ V G + Sbjct: 179 EITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLGV 238 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 T+IP + F + L + + + IA Sbjct: 239 TLIPGYMNNF--NTGQVVFRPIAGNVPSIALLMAWKKGEMKPALRDFIA 285 >UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=Streptomyces RepID=D1WWA8_9ACTO Length = 310 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 98/276 (35%), Gaps = 8/276 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A+ + RAA ++ M P + I LE+++G LF R ++ L AG+ Sbjct: 4 RHLRAFLAVAEELHFGRAARRLQMAQPPLSQRIRQLEKELGVQLFHRNTRSVRLTGAGET 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQL-ISLGDKYEGVTAQ 124 + V L ++GR + IG +L ++ + G+ Sbjct: 64 FLDPVRTVLDDLDTAVRAARSAGRGEYGRVTIGFAGASSHETLPRLTRAVRAAHPGLELV 123 Query: 125 PV-EFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISE-LPPLRLGFLVSRRYEER 182 + N + + D LD VS E + E L L ++R E Sbjct: 124 MTGQTYANVALSRVADGSLDLGFVRLPVSRPGVEHRVIDEEELLCALPSDHPLARH--EA 181 Query: 183 QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 L + P++ + + G P ++ ++ V G +T Sbjct: 182 VSLADLADEPFVSFPANTGSTVRDALTEACESAGFTPRVVQEAPDSYTIMALVAAGVGVT 241 Query: 243 VIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRN 278 + + R + + L Y P+ ++ + R Sbjct: 242 LT-VTSVRHIQQSGLVYRPLTGPPI-RRQAALAWRA 275 >UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=Actinomycetales RepID=A0QTM3_MYCS2 Length = 304 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 92/261 (35%), Gaps = 9/261 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F + + + RAAE++HM P + I LE ++G TL TR ++ L AG Sbjct: 4 RHLRYFRAVGEELHFGRAAERLHMAQPPLSQQIRQLERELGCTLLTRTTRSVELTPAGHT 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQ 124 ++ + + A + E I IG + + QL+ +LG+ G+ Sbjct: 64 YLRRAVEILDAVDAANTEAQRIASGIQGRIAIGCVGSATYSLLPQLVRALGESLPGIEVT 123 Query: 125 PV-EFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 E I+ L +D + V + L + R Sbjct: 124 VRGEMLAPAQIEALLSGGIDLALLRPPVRQEAVLTHTVRRDGLV---VALPADHALAIRD 180 Query: 184 EQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 + L++ ++ R+ ++ G P I ++ V G + Sbjct: 181 AVTVADLRDEDFVVHTGHGRSVMSNLVATVCADAGFLPRIRQEVSETSTLVTLVAAGLGV 240 Query: 242 TVIPHFAWRLVNPATLKYFDA 262 ++P ++ A ++Y Sbjct: 241 AIVPD-PTTALDIAGVRYVPL 260 >UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=C1M4D9_9ENTR Length = 302 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 100/258 (38%), Gaps = 13/258 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I + +R F+ +A+ + RAA +++++ P + I LE+Q+G L R + +++L Sbjct: 1 MNI-ELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQVGARLLARTNRSVAL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTI--IFDQLISLGDK 117 AG++ + ++ + E+ IG ++ P I + D L Sbjct: 60 TSAGKQFLADSRQILGLVNEAAARAERLHLGEAGELRIGFTSSAPFIKAVSDTLSLFRQS 119 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 Y V Q E + I L + LD + E E + L ++ R Sbjct: 120 YPAVHMQTREMNTREQIAPLNEGTLDLGLLRNTQLPETLEREIILHE-----PLMAMIPR 174 Query: 178 RYEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 + Q+ + L P++ I MR G+ PTI M I Sbjct: 175 AHPLAQKPVVTLAELANEPFVFFDPHVGTGLYDDILGLMRRYGLKPTIAQEVGEAMTIIG 234 Query: 234 AVERGHFLTVIPHFAWRL 251 V G ++++P R+ Sbjct: 235 LVAAGLGVSILPASFKRV 252 >UniRef50_Q1G7P1 Transcriptional regulator (LysR family) n=3 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q1G7P1_LACDA Length = 304 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 121/294 (41%), Gaps = 15/294 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I + +R F+ LA+T ++A+ AEK+ ++ +I+++EE++G LF ++ NI L Sbjct: 1 MNI---RHLRFFVELAKTEHMAKTAEKLGISQPSLSYAISSIEEELGVPLFEKEGRNIRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISLGDK-- 117 G+ + + L I I +G T + QLI + Sbjct: 58 TNYGKIYLEYVKSGLSDLDRGGEYIAELLDVNRGHIRVGF--TMGQDLIPQLIYKFKQEK 115 Query: 118 -YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVS 176 + +T V+ + + ++D L + LD ++SP +++ + IS L + +V Sbjct: 116 DTKDITFSFVQGTTDDLVDQLVNDNLDLVVSPAPDLPGLED--KVDISHLVDQEMLAVVP 173 Query: 177 -RRYEERQEQELLQELP-WLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 +++ L +L + + + + ++D + P II I Sbjct: 174 FSNPLAQKDSVSLADLAKYPMIYYSKSSRLRPLLDKMFAEAVVKPKIIMESMEDHTIIGF 233 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 V G+ + ++PH ++P T+K ++ +H T + + Sbjct: 234 VHWGYGVAIVPHLPQ--LDPRTVKLLHIDENLGVHPIFVVKKSDHFLTPAVTRF 285 >UniRef50_C2C4F2 LysR family transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4F2_LISGR Length = 286 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 113/289 (39%), Gaps = 10/289 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ K++ F+ + + I AA+K+H++ P I LE+++G +F R I+L Sbjct: 1 MNL---KQLEYFLAIVEEGQITAAAQKLHISQPPLSYQIHLLEKELGAKVFVRGSKGITL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQ-LISLGDKY 118 ++G++L Q+ + NEI + +S + IG +T ++ ++ + L Y Sbjct: 58 TESGKQLKQRAEQILSLAELTKNEIGKYQQGKSGTLRIGTVSTSAGLLPNKEMQQLTADY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + + E + ++D L + ++ + + + E + + + S Sbjct: 118 PHIHFEIYEDNTFNILDKLKNGMIELGVVRTPFNNQNIEGKYFNTEPMIAVFSELPQSWS 177 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 +E L E P + R FE +I A ++ I I+ + G Sbjct: 178 KKETVALADLSEQPLVIYR-----RFEQLIHATFADQQLHTFISCTCDDGRTAITWAKSG 232 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 + ++P +++ Y + + + + + + + Sbjct: 233 MGIAIVPASIGKMMKVDKANYKTIDYPEWWTKLAIIWLAEAELSPLAKR 281 >UniRef50_Q0S6C8 Transcriptional regulator, LysR family protein n=3 Tax=Rhodococcus RepID=Q0S6C8_RHOSR Length = 302 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 101/269 (37%), Gaps = 11/269 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I + M++F+ +A+ N RAAE +H+ + + LE+++G LF R ++ L Sbjct: 1 MEI---RWMKSFVAVAEELNYGRAAEVLHIAQPAVSQQVQQLEKRLGVKLFDRTTRSVRL 57 Query: 61 NKAGQELYQKLFPVYQRL-SAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLI-SLGDKY 118 AG+ Q + A+D + + +G Y L S+ +Y Sbjct: 58 TAAGERFLQPCKDALAGIVRAVDAAVIADPAVEGRVRVGFSGAYGQTELSSLARSVRRRY 117 Query: 119 EGVTAQPVEFS-ENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 + + ++D +++ QLD I VS +++ L L Sbjct: 118 PLIDLVLEGATVSGQILDEIWEGQLDLGIVSDAVSHPHVLTRQISVEYLSAL---LPSDH 174 Query: 178 RYEERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 ER+ +L L++ ++ + + A R G P I+ + + V Sbjct: 175 PLAERKSIDLAELRDETFVANPAATGSTLRRDLLAACRDAGFTPNIVQETTDGIVLTALV 234 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPH 264 G + ++P N L DA Sbjct: 235 AAGVGVALVPGDVQTYPNRVVLVPLDAGR 263 >UniRef50_C4ZHT7 Transcription activator of glutamate synthase(LysR family) n=6 Tax=Clostridiales RepID=C4ZHT7_EUBR3 Length = 293 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 114/293 (38%), Gaps = 12/293 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ +++ F +LAQ + RAA+ + +T +I+ LE+++G LF +K N+ L Sbjct: 1 MNLS---QLQYFKVLAQEEHYTRAAQMLSITQPSLSHAISQLEQELGTRLFEKKGRNVVL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKY 118 + G+ + + L+ I +G R I + T + +L+ D Y Sbjct: 58 TRYGKMFLPYVEESLKVLNEGVQRIQEVNGSRHGIIHLAYIYTMGSEFAPKLVRKFLDAY 117 Query: 119 E--GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVS 176 + + +ID L D + D + S + + + + +L L + Sbjct: 118 PDYDIEFHFTVGTTGEIIDGLKDDKYDIVFSSYKDGEQDIDFKKIANQKLV---LAVPMD 174 Query: 177 RRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + +L + + Q+ F+ + +ID G P + + + V Sbjct: 175 HPLSIKDSVDLRDTIEYPQIYFEKGSGLRPVIDQMFEEIGQFPKVAFEMEEDSSMAGLVA 234 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 +G + V+P ++ ++K D + P YL +++ + I Sbjct: 235 QGFGIAVMPDI--PILRSLSVKTLDIYNPPYERAVYLATLKQRYLSPVAKAFI 285 >UniRef50_B8J696 Transcriptional regulator, LysR family n=3 Tax=Anaeromyxobacter RepID=B8J696_ANAD2 Length = 296 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 86/244 (35%), Gaps = 3/244 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A+ + RAA ++ + P + I LE ++G LF R + L + G+ Sbjct: 4 RHLRYFVAVAEELHFGRAAARLGIAQPPLSQQIRQLERELGVELFLRARRRVELTEPGRV 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 L V QR S ++ + R + + +G+ + + ++ ++ V Sbjct: 64 LLGHARAVLQRASQAAEDVRRAARGETGALSVGVVASATYGVVPRVFRTFRARHPDVALG 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 S + L QLD ++ E + + E + L Sbjct: 124 VAVMSTGAQVAALRAGQLDLGLARTPFGDETLVAETV-LEEPVVVALPAGHPLSARRALR 182 Query: 185 QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVI 244 L P++ R + + R G P + ++ V G +T++ Sbjct: 183 LAALAPEPFVLFPRDRRPGWYDFVLGLCREAGFRPRVAEDAPELATAMALVAAGIGVTLV 242 Query: 245 PHFA 248 P Sbjct: 243 PASV 246 >UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepID=A9WGB3_CHLAA Length = 304 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 108/271 (39%), Gaps = 15/271 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F+ +A+ +I RAAEK++++ + I LEE+IG LF R I L AG+ Sbjct: 4 RQLRYFLAVAEEGHITRAAEKLYISQPALSQQIKLLEEEIGTVLFDRIGRRIRLTAAGEI 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQ 124 L Q LS I +G + + IG+ T + L+ + + Y ++ Q Sbjct: 64 LVAHARRALQELSEAQVAIDELNGLQRGMLRIGVVQTVNAYLMPDLVAAFTNAYPAISLQ 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E + + L D L I E +T EL L +VSR++ Sbjct: 124 IEELATRDIEQRLADGDLQIGIGFVPP-----ETAGVTGEELFSEDLVVVVSRQHPWADL 178 Query: 185 QEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 +L L + P + + + D GI P + + + ++AV + Sbjct: 179 PQLPVQSLHQQPLILL--STTFCTRRLWDRCTHIAGIQPRVQIEMNTIGSILAAVRQLTL 236 Query: 241 LTVIPHFAWRL-VNPATLKYFDA-PHRPMYM 269 TV+P + + D P R + + Sbjct: 237 ATVLPAMVLSGQPDLVGIPLVDPTPRRTVGL 267 >UniRef50_Q1YDL8 Transcriptional regulator, LysR family n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YDL8_MOBAS Length = 302 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 100/274 (36%), Gaps = 12/274 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++ +R+F+ +A+ + RAA ++H+ + I LEE++ TL R ++L Sbjct: 1 MVETRLLRSFVCVAEELHFGRAARRLHIAQPALTRQIQQLEERLQATLLNRNQRIVTLTP 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQ-LISLGDKYEG 120 AG+ ++ + + L E+ + + +G ++ + L + Sbjct: 61 AGRMFLERSYRILADLEQAAKEVRRVEAGQEGRLSVGFIHSSTYGVTPLVLRRFRLAFPR 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V + E + + L D Q+D I +S +L L R + + Sbjct: 121 VDLELFEMTIQEQLAALRDGQIDVGILRPPISDP-----SLRARPLREERFVVALPHDHR 175 Query: 181 ----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 +R L E ++ + F A I G P + I V Sbjct: 176 LAATDRLHLRDLSEDGFILFTQRKSPLFYARIIGMCEKAGFVPRVEQYATQIHTMIGLVS 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQ 270 G + ++P A R +N + Y + P +Q Sbjct: 236 AGMGVAIVPEVA-RSLNIPGVAYVEIADTPPTVQ 268 >UniRef50_Q11BY5 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11BY5_MESSB Length = 307 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 99/263 (37%), Gaps = 11/263 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 K+++ F +LA+ + RAAEK+++T SP +I LE+++G LF R ++ L + Sbjct: 1 MNLKQLQYFSVLAEELHFRRAAEKLNITQSPLSIAIQNLEQELGAKLFHRNQRSVQLTEV 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGID--NTYPTIIFDQLISLGDKYEG 120 G+ LY + RL + +I ++ ++ I ++ + + + K+ Sbjct: 61 GRRLYDHAQGLISRLEHCEQDIRAIVNGKAGQLRIAFTAASSLLSPFPKLISAFQKKFPE 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + Q + I L + +D + + + E+ L RL + + Sbjct: 121 IDVQLQSMTTVQQISALSEGTIDIGLLRRPRQSIPAEIST---RRLATDRLVVALPSGHP 177 Query: 181 ERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + + L + ++ + G P I+ + V Sbjct: 178 LTSKSVVAIPELAKEKFIFFPRKMGIGIYDQFIKLCGKWGFAPDIVQEAEEATTIVGLVA 237 Query: 237 RGHFLTVIPHFAWRLVNPATLKY 259 G + V+P R + L++ Sbjct: 238 AGLGVAVVPG-GLRYIQIPNLEF 259 >UniRef50_C6C1H7 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1H7_DESAD Length = 304 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 96/246 (39%), Gaps = 10/246 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R FI +A+ + RAA ++H+ PF + I LEE++G L R + L G+ Sbjct: 4 RQLRYFIAVAEELHFGRAARRVHIAQPPFSQQIKGLEEEVGARLLERNSRKVRLTNEGRY 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDN-TYPTIIFDQLISLGDKYEGVTAQ 124 Y++ + + + + I +G +++ + + S +Y GV+ + Sbjct: 64 FYKQALDIVAQAEEAAATVGRMAKGEYGNIKVGFMEIAMDSLLPEAVRSFSHRYPGVSVR 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY----E 180 +F + ++ + +LD S ++ A +E L+ +L + V + E Sbjct: 124 LSQFGASIQLERIHSGELDVGFSTVYLRA----MEGLSSVKLFSRKHVLAVPEDHIFTAE 179 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + + + L + + I G+ P + + + G Sbjct: 180 KSVSLKEIARENLLMFPRSGQPDLYDSIMQAFTSRGLVPKVRQEISGLSGASALISSGMG 239 Query: 241 LTVIPH 246 +T +P Sbjct: 240 VTFLPE 245 >UniRef50_UPI0001694914 Transcriptional Regulator, LysR family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694914 Length = 299 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 105/288 (36%), Gaps = 12/288 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A+ N RAA ++++T P + I LE+++G+ L R + L +AG+ Sbjct: 4 RHLRYFVTVAEELNFGRAAARLNITQPPLSQQIRQLEQELGFPLLFRTKQRVELTEAGKV 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQP 125 ++ + + + + + I + I L S ++ V+ Sbjct: 64 FLEEARITLAHIDKTLDSARRAHLGAAGRLDIAFVGSATYRIVPLLQSYRMRFPSVSLVL 123 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 + + L + Q+ I V + + L + + R + + +E Sbjct: 124 HQMKTANQLQALHESQIHLGIIRSPVQSPL-----LASTVIYRERFLVALPHTHPLTREN 178 Query: 186 EL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 +L L+ ++ N + + + G P I + ++ V G + Sbjct: 179 QLRIQDLEHQDFILPSRSNGSMYHEAVIRLCFQSGFYPKIALEAPEILTIVAFVSAGMGI 238 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 ++P N + Y + + M + + R + + + Q + Sbjct: 239 ALVPASFQNQQN-IGVVYRELENVG-TMLDMVMVWRKNEKSQVLKQFL 284 >UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3192A Length = 343 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 96/278 (34%), Gaps = 13/278 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ F+ +A+ + RAA ++H+ + LE ++G L R ++ +AG Sbjct: 4 RQLEYFVAVAEEASFTRAAARLHVAQPGVSAQVRRLEAELGEQLLDRSGRSVRPTEAGVA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPT-IIFDQLISLGDKYEGVTAQ 124 + + A+ I +G + IG+ ++YP+ ++ D L S + V Sbjct: 64 VLPHARAALASVGAVRGAIEELTGLVRGRVAIGMVSSYPSAVLPDLLASFSRLHPDVEIT 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E + + ++ L +LD + + L T+++ P L VS + Sbjct: 124 LGEDNSDRLVQALQHGELDLALIGSARTGPPPGLATQTLTDEP---LVAAVSHTHPLATR 180 Query: 185 QEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 L L P M +D G+ P I + + RG Sbjct: 181 STLTVAALAGSPL--MCLPRGTGIRTALDDACATAGVEPRIAFEASDPVPLALLAARGLG 238 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRN 278 + ++P L RP + R Sbjct: 239 VAILPAS-LAAARSGELHAIALT-RPQPRGRIELAWRA 274 >UniRef50_C2FRR6 LysR family transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2FRR6_9SPHI Length = 295 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 100/251 (39%), Gaps = 11/251 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F LA+ + +AA+K+H++ S + I LE+Q+G +LF R + ISL+ G+ Sbjct: 11 RQLRYFRALAEELHYHKAADKLHISQSALSQQIKLLEQQLGVSLFDRLNKKISLSDPGEL 70 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIG-IDNTYPTIIFDQLISLGDKYEGVTAQ 124 Y + + Q++ + S + IG + + + + + + Y + + Sbjct: 71 FYAEAVRILQQVERSMERLDQFHTGSAGTLKIGFVASAMSSFLPEAIKKFHTAYPAIHLR 130 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE---- 180 E + + L + +D + Q + + I + ++ R + Sbjct: 131 FEEMNNFEQLPALENGDIDIGFMRSN-----QVRDQMHILRVFEETFTLILPRNHRFGNY 185 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 ++ +L++ ++ + I G P I ++ S V G Sbjct: 186 HFKDLSILKDEDFILFPNAKSEFYFQQIINLCSDSGFYPRITHQAIHGPTIFSLVGCGMG 245 Query: 241 LTVIPHFAWRL 251 +++IP +L Sbjct: 246 ISIIPTSLAQL 256 >UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding n=10 Tax=Pseudomonas RepID=Q4ZQQ6_PSEU2 Length = 304 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 103/291 (35%), Gaps = 10/291 (3%) Query: 2 DIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLN 61 D + + +R + +A N RAAE +H++ + I LE +G LF R ++ Sbjct: 11 DAVLLRHIRYLLAVADHGNFTRAAEALHVSQPALSQQIRQLESSLGVQLFDRTRRSVVPT 70 Query: 62 KAGQELYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTIIFDQLI-SLGDKYE 119 AG+ L A +++ SR ++ +G+ T+ + LI Y Sbjct: 71 DAGRVYLDHARRCLLELDAGKRALNDVSDLSRGQLRLGVTPTFSEYLIAPLIDRFSALYP 130 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 GV E + + L LD I A + + L +L ++++ Sbjct: 131 GVAIILTELPLEQITEALISDALDLAIGFAGSHAVEIDSQPLFDEQLC-----LVMAKPA 185 Query: 180 EERQEQELLQELPWLQMR-FQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 E+Q L++L L+ ++DA + P I S + V +G Sbjct: 186 SEKQAALTLEDLQALRFALLAPGFATRQLLDAWCQMQNFKPIIGLEANSIAILLKVVAQG 245 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 T++P R P + P P L +N +A Sbjct: 246 RMATILPDAIVR-KQPGLCEVQTIPALP-GRTVALLRRKNGYQSAAAKAFA 294 >UniRef50_A9I810 Transcriptional regulator, LysR-family n=5 Tax=Proteobacteria RepID=A9I810_BORPD Length = 329 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 106/266 (39%), Gaps = 12/266 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R FI +A+ + +RAA ++H++ P +I LE +G L R ++ L +AG+ Sbjct: 36 RLLRYFIAVAEERHFSRAAARLHLSQPPLSYAIRQLESTLGTRLLERTSRHVELTEAGRV 95 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIG-IDNTYPTIIFDQLISLGDKYEGVTAQ 124 LY++ + ++ AI + G + IG + + + D L ++ V Sbjct: 96 LYREAQALLRQSEAIGTLVQRVGAGLRGRLRIGFVGSMLYRGLPDLLAAMRTALPDVEHV 155 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE--- 181 E + + I+ + + D H + E++ L + P V + Sbjct: 156 LTELNSHEQIEAVRRGEQDLGFI--HANPAPAEVQTLNLVAEP---FVLCVPDTHPLARR 210 Query: 182 -RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 R + L ++ ++ + + G +P I + +++ + V +G Sbjct: 211 RRVSLQALAHDDFILFARAASPSYHETVLSLCVTAGFHPAIRHEVRHWLSVAALVSQGLG 270 Query: 241 LTVIPH-FAWRLVNPATLKYFDAPHR 265 ++++P A + FD P R Sbjct: 271 VSIVPACLARSGLAGTRFIAFDHPAR 296 >UniRef50_A8FAC2 Possible LysR family transcriptional regulator n=21 Tax=Bacillus RepID=A8FAC2_BACP2 Length = 329 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 111/295 (37%), Gaps = 17/295 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++R FI++A+ N +RAAE++ M P + I LEEQ+G TLF R + L Sbjct: 33 MDL---RQIRYFIMVAEELNFSRAAERLKMAQPPLSQEIRKLEEQLGVTLFHRTRRQVEL 89 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLISLGDKYE 119 + +G+ ++ ++ + + IG ++ ++ D + + + Sbjct: 90 SDSGRVFLEEARRTLLQVDRTIKATQLADDGKIGHLTIGFVDS-TDMVIDIIKRFRESFP 148 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 + E + + L +++ + + ++ E L ++ + Sbjct: 149 NIHLVLCEMATEQQLKALHKKEIQIGFIRSNQNNKILTSEIC-----CEESLSLVLPENH 203 Query: 180 EERQEQE----LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + LL P++ A F +I + I+ ++ ++ V Sbjct: 204 PLASFPKVPIHLLANEPFIMFPRHLGAAFYDLIISYFWENNISLNVVQEAVQMHTIVNLV 263 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 G ++V+P + + P + LY H T+T+ QH Sbjct: 264 AAGMGISVVPSSVESVKRSGVVYRKIQETTP---RVNLYVSWRHDETSTVAQHFL 315 >UniRef50_Q049X7 Fhu operon transcription regulator n=13 Tax=Lactobacillus RepID=Q049X7_LACDB Length = 284 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 107/290 (36%), Gaps = 12/290 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 K++ F+++A+ I AA+++ + + LEE++G LF R+ I L +A Sbjct: 1 MNFKQLNYFLVVAEEGQITSAAKRLFVGQPALSYQLKQLEEELGAKLFIRQPYGIELTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIG-IDNTYPTIIFDQLISLGDKYEGV 121 G++L + + EI R + +G + ++ + +L + ++ GV Sbjct: 61 GKKLRDYAGQILTLAQNVQTEITELDRGGWGRVKLGSVSSSIGELPSAKLTAFARQHPGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + G++D L LD I + NL ++ + + + + Sbjct: 121 SFDIYEDNTFGILDKLQGNLLDLAIVRTPYNRV-----NLNFVDISDEPMTAVTCQDFFP 175 Query: 182 RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 + + LQ+L + R FE M G+ P + + I + G + Sbjct: 176 GKGKVGLQDLAGQPLVIYRR--FEDMFKEAFAEKGLTPNFVVKCDDSRTAIRWSDSGLGI 233 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 ++P + + D + R R +++ I Sbjct: 234 ALVPESIAKTYARGHIYPIDL---AKWRTRLQLVWRKDRVVTPLMRQIIA 280 >UniRef50_C6BXQ9 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXQ9_DESAD Length = 301 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 102/282 (36%), Gaps = 10/282 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++++ F+ +A+ + RAA+++ ++ P + I E+++G LF R +++L A Sbjct: 1 METRQLKYFLAVAEELHFGRAAKRLFISQPPLSQQIKKFEDELGVKLFQRNKRSVALTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIG-IDNTYPTIIFDQLISLGDKYEGV 121 G L + + + + + + ++ + +G I T + + + +Y V Sbjct: 61 GVSLLRDAPGIMRAIGRAKSNLLDAATGEGGQFTLGYIGPALETTLTEIIRDFKGQYPSV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + + +D I V ++ +L +V + Sbjct: 121 RLDLREMFTTDQLKAIRSGDIDAGI----VRLFRHDVSDLERELFHRESYALVVPDGHPL 176 Query: 182 RQEQEL-LQELPWLQMRFQNRANFEAMIDANMR---PCGINPTIIYRPYSFMAKISAVER 237 + + EL Q F R + D MR G P ++ A ++ V Sbjct: 177 ADRAAVDVSELAGEQFIFFPREGQPRLYDEWMRVFSEAGFVPDVVQEATRKSATVALVAA 236 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNH 279 + ++P R+ + + P+ +Y N Sbjct: 237 NMGIGIVPESMARIKPQGVVFKRLSGDFPVIEMSLIYRSTNG 278 >UniRef50_A8GI93 Transcriptional regulator, LysR family n=3 Tax=Enterobacteriaceae RepID=A8GI93_SERP5 Length = 292 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 111/272 (40%), Gaps = 11/272 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 K++R + +A+ + RAA++ H S IA LEE++G TLF R + L A Sbjct: 1 MNLKQIRFALAVAEEQSFTRAAQRCHTVQSALSHQIAKLEEELGCTLFERTSRRVRLTTA 60 Query: 64 GQELYQKLFPVYQRLSAIDNE-IHNSGRRSREIVIGIDNTYPTI-IFDQLISLGDKYEGV 121 GQ Q + A+ E + SG S + IG +T I + ++L + Y V Sbjct: 61 GQAFIQPAQRLLAAKQALVEEVVAASGTVSGTLTIGTISTINAIDLTEKLGNFHRHYPAV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE- 180 + +++++ ++ D + ++ ++ +L L LV+ ++ Sbjct: 121 NIRLYVGMSEALLEDVRQQKTDVAFVG--LWPGDIDMLPVSHRQLTDEPLVALVATQHPL 178 Query: 181 ---ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 +R + L E+P + F + D + GI + + + V R Sbjct: 179 ASRQRVNLQTLSEVPLVD--FYSGTGARRQTDRAFQAAGIKRHVSFEIDHIEWLENLVRR 236 Query: 238 GHFLTVIP-HFAWRLVNPATLKYFDAPHRPMY 268 G ++P A RL + ++ D P R +Y Sbjct: 237 GLAAGIVPISTAQRLSSLVSIPIEDGPRRQVY 268 >UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B5WR38_9BURK Length = 309 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 105/296 (35%), Gaps = 14/296 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+++A+ + RAAE++ + P I LE IG TLF R + L +AG Sbjct: 4 RHLRYFVVVAEELHFTRAAERLGIGQPPLSLQIQRLERDIGATLFRRLSRGVELTEAGVL 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNT--YPTIIFDQLISLGDKYEGVTA 123 L + + ++ R + +G + ++ + ++ V Sbjct: 64 LLDNARHILALVDRTCTDVQRLSRGEIGHMRVGFAGATYFLPLVPAIIREYRTRHPDVVL 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 P + + ++D L + ++D + + + L + L + ++ + + Sbjct: 124 SPEQSNTPSLVDGLLEGRVDAAFIRPPIVS----ADELDVELLVKEDMVVVLPHSHPLAR 179 Query: 184 EQE-----LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 E L E +L A I + + G P + ++ V G Sbjct: 180 AGEPVPLSALAEETFLLFPRAIGAGLYDAITSACQRAGFLPRLGQEAPQIVSIAPLVGAG 239 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRD 294 ++++P ++ + A + P + R H + + A R+ Sbjct: 240 FGVSIVPRSTTQIQTDEVVYLPIAGNAP--KAPISLAWRRHNPSPVVRLFRAVARE 293 >UniRef50_A3UQR4 Transcriptional regulator, LysR family n=1 Tax=Vibrio splendidus 12B01 RepID=A3UQR4_VIBSP Length = 301 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 92/249 (36%), Gaps = 10/249 (4%) Query: 1 MDI-FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNIS 59 M + + + +++F LA+ N RAAEK+++ +S+ LE +G LF R + Sbjct: 1 MSLNYEIRHLKHFFALAEELNFRRAAEKLNIAQPALSRSLQKLESDLGVILFIRTTRLVE 60 Query: 60 LNKAGQELYQKLFPV-YQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLI-SLGDK 117 L AG+ + + A + + + IG N T QL+ + D Sbjct: 61 LTDAGKAFHAGAHQAFLSLIDAEKSAMRVKIGEEGSLRIGYTNFAITGQLPQLLKAFKDS 120 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHV---SARVQELENLTISELPPLRLGFL 174 Y + + + I++L +LDF + + + + P Sbjct: 121 YPLIRLELIHQFSADQIESLEKERLDFGFITGPLIYKGISSFPFQQDPLVAIVPDSHPL- 179 Query: 175 VSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 ++ + L+ ++ N +F +I R G P I+ Y A + Sbjct: 180 ---SHKPSIDLIDLRHESFILGNANNWTHFFKIIQRVCRNAGFMPNIVEEAYDTEAILGL 236 Query: 235 VERGHFLTV 243 V G +++ Sbjct: 237 VSSGFGISL 245 >UniRef50_B5CN01 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B5CN01_9FIRM Length = 297 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 107/306 (34%), Gaps = 18/306 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+++ ++R F+ LA+ +AA ++++T +I+ LE ++G LF + ISL Sbjct: 1 MNLY---QLRYFLELAEKRQYTKAARQLNITQPSLSYAISQLENELGVKLFEKDGRTISL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYE 119 G++L L + + +I +G T T L S + Sbjct: 58 TDCGRDLAGCASESLAILDKGIANLKRKAAGAGKIRLGFLRTLGTDYIPDLASRYLKQNP 117 Query: 120 G--VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 T + S ++++L + D + S + E + + + L +V Sbjct: 118 DKETTFRFHTGSTGALLESLNAGEYDIVFSSEPP-----ESNDFHYTPVMKQDLVLIVPD 172 Query: 178 RYEERQE--QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + + L + L + + F A + D G P I+Y V Sbjct: 173 GHPLADQYRIPLSETLAYPYIYFDQSAGLRYVTDLLFEQIGQKPEIVYETDEDQVIAGLV 232 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATM---LQHIAED 292 G + ++P L+ ++ + Y+ + R H + + + Sbjct: 233 AHGFGIALVP--YMELLLRLNVRILQISYPECQRDIYMVTSRRHELSPAAHHFREFVLTG 290 Query: 293 RDGTSH 298 T H Sbjct: 291 LLDTPH 296 >UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F961_ACIC5 Length = 288 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 95/245 (38%), Gaps = 9/245 (3%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R +A+T N +RAAE+ + + + LEE +G LF R ++ + +AG+ Sbjct: 5 QLRYVCAIAETGNFSRAAERCQVAQPSLSQQVLKLEEDLGVKLFDRLGRSLRITEAGRAF 64 Query: 68 YQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQL-ISLGDKYEGVTAQP 125 + ++ A + S + +G+ T + + + KY + Sbjct: 65 LPHARSILHQMEAARASVAGKSKDVRGSVAVGVIPTIAPYLMPRYTAAFARKYPEARLRI 124 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 VE + ++++L + +D + + + +L L + ++ + + Q Sbjct: 125 VEETTPVLVESLRNLSIDLAVLALPLRHK-----DLECIPLLTEPMFAVLPKDHPRASAQ 179 Query: 186 EL-LQELPWLQMRFQNRAN-FEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTV 243 L L++L + F + A + P I + F + V G +++ Sbjct: 180 TLSLKDLRGETFVMLRDGHCFRDLSLAACSHARVTPRIAFESGQFRSLFGMVAAGMGVSL 239 Query: 244 IPHFA 248 +P A Sbjct: 240 VPQMA 244 >UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV81_ALIAD Length = 305 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 99/263 (37%), Gaps = 6/263 (2%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R F+ + + N+ RAAEK+H++ + + LE+++G L R + +N AG+ + Sbjct: 7 QLRVFVTVVEENSFTRAAEKLHISQPAISQHVQTLEQRLGVRLIDRGRRRLQVNPAGRIV 66 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQP 125 Y+ + ++ I + + + +G TY + +I+ Y V Sbjct: 67 YEHAKEILALYRRMERLIADMQEMPAGPVHVGASLTYGEYVLPHVIARFRKAYPAVQPSV 126 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 + + + RQLD I E+ +E L + S Y E ++ Sbjct: 127 SIANTQTIAHAVAVRQLDIGIVEGQ-DVVEDEVVLTPFAEDEMLVVASPASPWYAEAPDR 185 Query: 186 ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIP 245 LL+ W + + M D GI P + S +V G L + Sbjct: 186 SLLERATW--FIREPGSGTREMTDRLFTQLGIQPRDLVEYTSSQVIKESVAAGLGLACLS 243 Query: 246 HFAW-RLVNPATLKYFDAPHRPM 267 + R + L+ P P+ Sbjct: 244 RWVVARELAWGMLRTLPIPCAPV 266 >UniRef50_UPI00019735EF LysR family transcriptional regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019735EF Length = 314 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 123/301 (40%), Gaps = 22/301 (7%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 ++ FI+ A+ N +AA++++++ IA LEE G LF R ++L AGQ L Sbjct: 6 LKYFIVAAEEMNFTKAAKRLYISQQSLSNHIAKLEEYFGVQLFDRNT-PLTLTVAGQRLL 64 Query: 69 QKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQPV 126 + + + E+ + RS E+ +GI N +++ LI ++ V + Sbjct: 65 KNAQLIMDVKKQTELELQDIRDFRSAELTVGIPNARGSVMLPPLITRFHREFPQVQLHLM 124 Query: 127 EFSENGVIDNLFDRQLDFIISPQH------VSARVQELENLTISELPPLRLGFLVSRRYE 180 E + + + L+ ++D I + + +QE + + L F R + Sbjct: 125 EKTSLEITEALYKGKVDLTIGFELDDPANIQTETLQEEHTMILVPACILEQFFTKEERLQ 184 Query: 181 ERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + + L + P+++M+ QN A+ + + R G +P I+ + M IS Sbjct: 185 IERRESLPIDVFKNCPFIKMKHQNWIG--AVFERSCRDSGFSPDIVLETANIMTMISLCI 242 Query: 237 RGHFLTVIPHFAWRLVNPATLKY-------FDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + ++P +P + F + + + + ++N T + I Sbjct: 243 SGLGIIIVPKVFLGESSPMYARIRQEKAKMFVLDYPSAHKRITVNYLKNKYQTKAAREFI 302 Query: 290 A 290 A Sbjct: 303 A 303 >UniRef50_C9RY94 Transcriptional regulator, LysR family n=8 Tax=Bacillales RepID=C9RY94_GEOSY Length = 304 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 116/294 (39%), Gaps = 22/294 (7%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD + + F+ + + N +AAE++HMT + I LE L R + + L Sbjct: 1 MD----QLLYVFVKVVEKGNFTKAAEELHMTQPAVSQHIQTLERLFDTKLLYRTNKYVKL 56 Query: 61 NKAGQELYQKLFPVY---QRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLIS-LGD 116 NKAG+ +Y + R++ + +++ N R S E+ IG TY + Q+I+ L Sbjct: 57 NKAGEIVYHYAKEILGLYTRMNQLLDDLMN--RASGELSIGASYTYGEYVLPQMIAKLHQ 114 Query: 117 KYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVS 176 Y + + N +++ + QLD I + E +N+ I ++ + S Sbjct: 115 HYPLIKPTITIGNSNEIVEMVRGHQLDVGIIEMDI-----EPKNVYIEPFAQDQMVVVAS 169 Query: 177 RRYE----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 + E + E L+ W+ + + D P+ I S Sbjct: 170 AHHPYAQKETVQMEDLRNATWI--VRETGSGTRKATDEFFLKHNFFPSSIMEFGSTQLIK 227 Query: 233 SAVERGHFLTVIPHFA-WRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATM 285 AVE G LT + + + ++ TLK P + L + + YT M Sbjct: 228 EAVEAGLGLTFLSLWTIKKELSFGTLKIIPINDEPFFRHFSLVTPKTPFYTKAM 281 >UniRef50_Q6FDZ3 Putative transcriptional regulator n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FDZ3_ACIAD Length = 307 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 112/277 (40%), Gaps = 6/277 (2%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + K+ F+ + + +NI+RAA ++HM P + I +LE+ + TL R + + + Sbjct: 1 MIDIHKLNAFVAVVEESNISRAANRLHMQQPPLTRLIQSLEQDLNTTLLKRLPRGVEVTE 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYP--TIIFDQLISLGDKYE 119 AG+ LYQ+ + S+I + N + + +I IG ++ + L +K+ Sbjct: 61 AGKVLYQEAVTILAHASSIPQRVQNIAQGKEGQINIGFTHSIGLHPFLPTLLRHFREKFP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVS--ARVQELENLTISELPPLRLGFLVSR 177 V+ E S + + D + + +LD + + VQ + L + + L ++ Sbjct: 121 AVSIHLEEDSSSALTDAVINEKLDIVFLRKPAPKHTAVQTMHVLNETLIVALPSNHPLAM 180 Query: 178 RYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + + L+ ++ R + I AN G +P I+ + ++ + Sbjct: 181 Q-QGAIHLPDLEPYEFVLYRRLAGQDLFDNILANCYQAGFSPNIVQEAPRLTSSLNLIAA 239 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLY 274 G L+++P N + +P Y Sbjct: 240 GIGLSIVPASIQDFWNKQIIYRPLEAKKPCIAPIYAI 276 >UniRef50_D0IX94 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0IX94_COMTE Length = 294 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 91/261 (34%), Gaps = 9/261 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++ F+ +A+ N +RAA+++HM+ P + I LE+++G LF R ++L Sbjct: 1 MDL---RRLTCFLAVAEELNFSRAAQRLHMSQPPLSQQIRLLEQEMGAQLFERSRRAVAL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTI--IFDQLISLGDK 117 AG L K + + + + + + I + P L + Sbjct: 58 TPAGLLLQDKARQIVELHQQAGELVRMAAHGLAGRLRIAFTASVPLFDEFSTMLRDFRSR 117 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 + V + I L Q+D + R+ L+L V+ Sbjct: 118 HPQVELDLQHMTTGEQIAALTAGQIDIGFMRPSPTFRIPVPIREQTLWRDELKLALPVAH 177 Query: 178 RYEERQEQ---ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 E L + P++ I A G P I ++ Sbjct: 178 AKAAAGEALALSSLADQPFVLHPAVLGGGLHEHILALCSEAGFVPRIAQPARETSTMMAL 237 Query: 235 VERGHFLTVIPHFAWRLVNPA 255 V G L+++P R+ P Sbjct: 238 VAAGLGLSIVPSVYERICPPG 258 >UniRef50_UPI00016945D8 transcriptional regulator, LysR family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945D8 Length = 292 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 113/288 (39%), Gaps = 14/288 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ +++ F +A+ ++ +AA+++H+ S ++I+ LEE +G +LF RK I L Sbjct: 1 MELL---QLKYFQKVAKIQHMTKAAQELHIAQSSLSRTISRLEEDLGVSLFERKGRQIHL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISLGDKYE 119 N GQ ++ ++ L EI G ++ +V+G T ++ D + Sbjct: 58 NMFGQRFLNRVERIFTELEEGTEEIAELQGIENKRVVVGA--TITRLLPDLFKEFLTVHP 115 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V Q +FS + + + +DF IS + + E L + Sbjct: 116 DVKFQLFQFSTTEIQEQIQQGTIDFCISSPPIHQSGIVSIPIMTEEF---FLAVPQNHYL 172 Query: 180 EERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 R+ +L + E ++ + +F+ I + G P I++ V Sbjct: 173 ANRRTVKLSDIAEESFISLTMD--YSFQESIYSLCIRSGFKPKIMFESNDLEVIGKLVTD 230 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATM 285 G + +P + W+ N P Y + S + Y + + Sbjct: 231 GFGVAFMPAYWWKE-NKVNSPVKIRIDSPYYQRIIGLSWKERCYLSNV 277 >UniRef50_B1HQK1 HTH-type transcriptional regulator n=3 Tax=Bacillales RepID=B1HQK1_LYSSC Length = 297 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 120/298 (40%), Gaps = 17/298 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI K+++ FI +++ N ++AAE++H++ +I LE +IG L R N+ L Sbjct: 1 MDI---KQLQYFIAVSEHMNFSKAAERLHISQPSLSNAIKKLEHEIGSPLLDRNTRNLQL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG+ L+++ + + + + E+ + EI IG+ + + + + Y Sbjct: 58 TEAGEVLFERAKVIVKNMEVLKKEMDEVVVHGTSEITIGVMESIKHWLPKVIANYKKDYP 117 Query: 120 GVTAQPVE-FSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + V+ V +L + II+ Q + + L + L RL ++ Sbjct: 118 QMMIHLVDILGSKRVKKSLKSYKTHLIITNQ-----LMDDPELEVKTLYEERLVAVLPLH 172 Query: 179 YEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + +++ L + P++ I G + I + F +S Sbjct: 173 HPLAKKETLSISDISAEPFI--ISTEGFQTRRDILNTFEQAGKSIDIQFEIERFETAVSL 230 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAED 292 V +T++P + T+ + + YL ++N R+ ++ + +D Sbjct: 231 VRENLGITILPENYLQGPTAKTIVKKEIEGANLCRNVYLVYLKN-RHLPFAIRQLLKD 287 >UniRef50_B4SSK9 Transcriptional regulator, LysR family n=3 Tax=Stenotrophomonas RepID=B4SSK9_STRM5 Length = 302 Score = 184 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 99/254 (38%), Gaps = 7/254 (2%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M I + +R F+ +A T + +AAE++ M+ P + I LE+ IG LF R + L Sbjct: 1 MSI-ELRHLRYFLAVADTLHFGQAAERLGMSQPPLSQQIRQLEDLIGARLFVRSHRRVQL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYP--TIIFDQLISLGDK 117 AG+ L ++ + ++ + +E+ + R E+ IG+ P I ++ + Sbjct: 60 TAAGELLQERARAIVLQVESAVDEVQRAQRGEQGELRIGLTRATPLSPQIPRSILQYRQR 119 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 Y V Q E + ID L D LD I + +L + L + + Sbjct: 120 YPQVRLQLSEMNTLQQIDALLDGSLDVGIIRKRALPPELVAHSLFVDPLALIVHADHPAL 179 Query: 178 RYEERQEQELLQE---LPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 R +Q L++ P++ R A + A G P I+ IS Sbjct: 180 RRLSKQGTLSLRDFAQEPFVAFRRSAGAGIHDHMIALCAAAGFTPRIVQEAGEASTLISL 239 Query: 235 VERGHFLTVIPHFA 248 G ++P Sbjct: 240 AAAGLGAAILPSSC 253 >UniRef50_B5GYU9 LysR-family transcriptional regulator (Fragment) n=11 Tax=Streptomyces RepID=B5GYU9_STRCL Length = 340 Score = 184 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 102/281 (36%), Gaps = 12/281 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++ +R +A T + + AA + T + + ALE G L R + L + Sbjct: 1 MIEARHLRVLRAVATTGSFSAAARALGCTQPAVSQQMKALETSAGTPLLIRTGREMRLTQ 60 Query: 63 AGQELYQKLFPVYQRLS-AIDNEIHNSGRRSREIV-IGIDNTYPTIIFDQLISLGDKYEG 120 AG+ L + + L+ A + +G R+ + + + T++ L +L + G Sbjct: 61 AGEVLVRHASGILAGLTAAEEEVAAIAGLRAGRVRLVSFPSGSSTLVPSALAALRAAHPG 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSA-RVQELENLTISELPPLRLGFLVSRRY 179 VE ++ L + D ++ ++ A R E +L + L RL LV + Sbjct: 121 TRVSLVEAEPPRSVEMLREGDCDVALAFRYAGAEREAEWGDLVVRPLLSDRLVGLVPEGH 180 Query: 180 E----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + + L + PW+ + G P I + + I V Sbjct: 181 RLAGADTVTIDDLADEPWIAGC----PRCRRQLVEVCESAGFAPRIDFATDDYPTVIGLV 236 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSI 276 G + V+P A V P + P+ + ++ Sbjct: 237 GAGLGVAVLPGLALESVRPKGARAVAV-EPPVVRKIVALTL 276 >UniRef50_B2I0S1 Transcriptional regulator n=12 Tax=Acinetobacter RepID=B2I0S1_ACIBC Length = 306 Score = 184 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 113/301 (37%), Gaps = 15/301 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A+ N +AA++++M+ P I LEE++G LF R + + L +AG Sbjct: 4 RHIRYFLAVAEEKNFTKAAQRLNMSQPPLSMQIRDLEEELGADLFIRSPHGVELTEAGLA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNT--YPTIIFDQLISLGDKYEGVTA 123 + PV QR+ N + ++ +G T +I + +Y V Sbjct: 64 FLNAIQPVQQRVEDAANLVKQVANGEVGQLRLGFTGTSMLNPLIPKCVRYFQQQYPKVNL 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY---- 179 + E + +ID L + +LD I + + ++L + EL L + Sbjct: 124 KLEEANTLLLIDLLLEDRLDVAI----IRSPRNMPDSLILQELLAEPLIAALPSESFNLD 179 Query: 180 --EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + + L+EL ++ A I G P I ++ +S V Sbjct: 180 DVSQEIDLTALRELDFIVSPPSVSAGLFDAIKQACHEHGFEPKIGQNAPQIVSILSLVSA 239 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 ++++P +L + + P+ + + H + + + + Sbjct: 240 NLGVSLVPESTKQLQIQG--VAYRSLKAPVPKVGLGLAYKKHAPSQMAINFASVVQVACH 297 Query: 298 H 298 H Sbjct: 298 H 298 >UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=Actinomycetales RepID=Q2J7C4_FRASC Length = 316 Score = 184 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 92/285 (32%), Gaps = 3/285 (1%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++ F+ +A+T + RAA+++H+ + I ALE+++G LF R NISL AG+ L Sbjct: 5 QLAYFVAVAETRHFTRAAQRVHVAQPSLSQQIRALEQELGTPLFNRARGNISLTPAGETL 64 Query: 68 YQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPT-IIFDQLISLGDKYEGVTAQP 125 + + R + +G + T + D L +Y G+ Sbjct: 65 LPLARRILTDTETARQRVTELLDLRHGTVRLGATPSLCTGFLPDVLRLFHQRYPGIRLLV 124 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 E ++ +L LD + + + L + + + L + Sbjct: 125 EEGGSRDLVRDLAAGSLDLALIILPLQSSDPALATSPLIRESLVLVSSLDEPPIVAGRPL 184 Query: 186 ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIP 245 + + F+ + R G P A + V G VIP Sbjct: 185 TVADLRNHPMVMFRRGYDLREATVTACREAGFEPIFAIEGGEMDAVLGFVAAGLGSAVIP 244 Query: 246 HFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 + + F P + A LQ + Sbjct: 245 STVAHRLG-MRVTPFVLPGLQRTIGLARRRDVEPTRAAVELQRVL 288 >UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax=Bacillales RepID=GLTC_BACSU Length = 300 Score = 184 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 101/252 (40%), Gaps = 8/252 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F+ +A+ +++ AA+ +H+ S + IA LEE++ TLF R+ NI L G+E Sbjct: 4 RQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFEREGRNIKLTPIGKE 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 + + + +I + IG + + + +IS ++Y V Sbjct: 64 FLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTSLASQLLPTVISAFKEEYPHVEFL 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 + S +I+ + +R +D + + ++T L ++ LV + ++ Sbjct: 124 LRQGSYKFLIEAVRNRDIDLAL----LGPVPTNFSDITGKILFTEKIYALVPLNHPLAKQ 179 Query: 185 QEL-LQELPWLQMR-FQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 + + L +L Q F M + G P + A V G +T Sbjct: 180 KTVHLIDLRNDQFVLFPEGFVLREMAIDTCKQAGFAPLVSTEGEDLDAIKGLVSAGMGVT 239 Query: 243 VIPHFAWRLVNP 254 ++P + P Sbjct: 240 LLPESTFAETTP 251 >UniRef50_A5FXN6 Transcriptional regulator, LysR family n=6 Tax=Alphaproteobacteria RepID=A5FXN6_ACICJ Length = 306 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 62/286 (21%), Positives = 105/286 (36%), Gaps = 13/286 (4%) Query: 1 MDI--FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNI 58 MD + +R F+ +A+T + AA ++ ++ P + I LE +IG TL R N+ Sbjct: 1 MDRTGMELRHLRYFVAVAETLSFTEAARRLAISQPPLSQQIRDLELEIGTTLIARSSRNV 60 Query: 59 SLNKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLISLGDK 117 SL AG + + +E G RS + IG+ L++ Sbjct: 61 SLTPAGAAFLTRARQILAEAVRARDEARVIGAGRSGTLDIGMTGAVLLGGLGGLVAAFQI 120 Query: 118 Y-EGVTAQPVEFSENGVIDNLFDRQLDFIISPQH---VSARVQELENLTISELPPLRLGF 173 + GV + E L +LD + RV+ + +S + P Sbjct: 121 FAPGVQVRLHEMPPGEQEAALGAGRLDLCFLRTPGADPALRVEPAWHEGVSAVLPRDHPL 180 Query: 174 LVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 V RR L++ P++ R + + F + G P I+ A ++ Sbjct: 181 AVRRRLALAD----LRDEPFVFFRRAD-SRFADHLWTCCIEAGFAPRIVQEVVEAHAVMA 235 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNH 279 V G + ++P A RL P+ L + P L R H Sbjct: 236 LVADGFGIALLPDSARRLA-PSGLGFRPLAGNPARADVSLVYPREH 280 >UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=Burkholderiales RepID=A1TN88_ACIAC Length = 307 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 101/274 (36%), Gaps = 10/274 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F +LA + RAA +++M+ P +I LEE++G LF R + L AG+ Sbjct: 4 RHLRYFAVLADELHFGRAAARLNMSQPPLSVAIRQLEERVGAQLFERTPKEVRLTPAGRA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIG-IDNTYPTIIFDQLISLGDKYEGVTAQ 124 L V + +E + + + IG + + L ++ GV Sbjct: 64 LKASARRVLAQAEEALSEARGVAAGLAGRLRIGFVGAMLYRGLPQALGVFQQRHPGVRVS 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E + I L +LD H S L+ + P L R R+ Sbjct: 124 LQELNSGEQIGELLHDRLDLGFV--HTSRMPATLQQRLLVTEPFLC-CLPAGHRLARRKV 180 Query: 185 QEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 +L L P++ ++ A I + G P I + ++A +S V +G + Sbjct: 181 IDLRDLAGEPFVLFARAVSPDYHARILSICASAGFQPEIGHEVRHWLAVVSLVSQGLGVA 240 Query: 243 VIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSI 276 ++P P P P Q Y++ Sbjct: 241 LVPQAMEHSRLPG---AVFRPVGPAVAQSEAYAV 271 >UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67PU0_SYMTH Length = 299 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 108/280 (38%), Gaps = 8/280 (2%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + + + F + +T ARA + ++ + +AALE ++G L R I L A Sbjct: 1 MLLQHLITFCRVVETGGFARAGALVGLSQPAVTRQVAALEAELGTPLLDRSGRQIHLTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYP-TIIFDQLISLGDKYEGV 121 G+ +Y++ + ++ + E+ + I IG T ++ L + ++ G+ Sbjct: 61 GRLVYERARRIITAVNTLKEEVADLAHPERGRIAIGAVTTVGLRLLPPILAAFKREHPGI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 I L + +++ I P V+ L ++ + E P + R E Sbjct: 121 RVHVKADRTQETIQRLLEGEIELAILPTPVTHP--RLRSVPLVEDPVVL--VCAPGRRSE 176 Query: 182 RQEQELLQELPWLQM-RFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + L +L + + FQ + F +DA + G+ P + S A VE G Sbjct: 177 LPDPLPLAKLGEIDLISFQAPSRFRTFVDAMLEQAGVYPNVTMEFDSHEAVTLMVEAGFG 236 Query: 241 LTVIPHFAW-RLVNPATLKYFDAPHRPMYMQEYLYSIRNH 279 ++P A R + T+ + P + + R+ Sbjct: 237 CALVPASAVERELALGTVVRVEVEGMPRMARTTSLAFRHP 276 >UniRef50_C5CMN8 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CMN8_VARPS Length = 302 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 116/303 (38%), Gaps = 12/303 (3%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + +++R F+++A+ N RAAEK+HM+ P +I LE Q+G L R +++ L Sbjct: 1 MIEFRQLRQFVVVAEELNFGRAAEKLHMSQPPLSVAIRNLELQVGTLLIDRSRHHVRLTP 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP-TIIFDQLISLGDKYEG 120 AG+ + + + A + + + + + + ++ D Y Sbjct: 61 AGKVFLKDAQRLLTQAHAATERARRAAQGAEGSLSLSFVPSAALDLLPDIFKRFQRDYPT 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V + ++ L ++D + V +Q++ +L +L V R + Sbjct: 121 VHLHVTAETTTRQVEALRRAEVDLAL----VVGPLQDVPDLAFVDLQAQGFVIAVPRSHA 176 Query: 181 ERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 +++ + L ++ A F A + + + G +P ++ A ++ V Sbjct: 177 LAKQRSVKIKALAAESFIAFPAAEGAGFVAALLSACKAAGFSPRVVQEASQMQAVLTLVA 236 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFD-APHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDG 295 G + ++P R++ + + D A R + ++ + +A Sbjct: 237 GGLGIALVPASM-RMLAMKDVAFLDVAETRAPPTYQLAFAYSRTNDNPVIHSFLAVAGKA 295 Query: 296 TSH 298 +H Sbjct: 296 VAH 298 >UniRef50_D1A8L0 Transcriptional regulator, LysR family n=2 Tax=Actinomycetales RepID=D1A8L0_THECD Length = 350 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 96/278 (34%), Gaps = 23/278 (8%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ F+ +A+ + AAE + + K I ALE ++G +LF+R NI+L AG+ Sbjct: 4 QQLAYFVAVAEIRHFTHAAEALRVAQPSLSKQIRALETELGASLFSRARGNITLTPAGEA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTY-PTIIFDQLISLGDKYEGVTAQ 124 L + + E+ G R + +G + ++ D L D Y G+ Sbjct: 64 LLPLAKRILADVDTARLEVQELVGLRRGRVRLGATPSLCAGLLADVLRRFHDTYPGIQLL 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISE--------------LPPLR 170 E ++ L LD + ++ + E PP Sbjct: 124 VEEGGSRDLVRQLTRGALDLALVILPLAGDAPLETTAILREHLVVASPAPRRNGSRPPAV 183 Query: 171 LGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMA 230 G L+ RR R E L++ P + R + R G P A Sbjct: 184 RGALLPRRPYVRI--EDLRDRPLVMFR--PGYDLREATIGACRQAGFEPRFAVEGGEMDA 239 Query: 231 KISAVERGHFLTVIPHFAW---RLVNPATLKYFDAPHR 265 + VE G + V+P + L D P Sbjct: 240 VLRFVEAGLGVAVVPSMVLAGRPGLRGTPLAIGDPPEE 277 >UniRef50_C1SLV8 Transcriptional regulator, LysR family n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLV8_9BACT Length = 298 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 113/289 (39%), Gaps = 15/289 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++ F +A+ N+ RAAE++++ K+I+ LE+ +G +LF R I L Sbjct: 1 MDLL---QLKYFQTVAKFENVTRAAEELNIAQPSLSKTISNLEKDLGVSLFDRPGRRIRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISLGDKYE 119 NK G +++ + L E+ + +G I IG + ++ + + Sbjct: 58 NKFGTAFLKRVQNSFSELEQGQKELMDMAGLEQGNINIGA--SIARLLPKMFSEFLNHHG 115 Query: 120 GVTAQPVE-FSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + ++ + + L + ++D IS V L E+ L + R Sbjct: 116 NVRFRLIQVINHLDLQQRLINGRIDLCISILPVEENKVHCTPLFDEEI---FLAVMPKHR 172 Query: 179 YEERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 R+ L + + P++ R+ + + D + I P + + S V+ Sbjct: 173 LAGRENINLKEIADEPFI--RYAADSALRLITDNFFQEAEIIPDTAFECTTPEVICSLVQ 230 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATM 285 G + +IP W L L +P+ + S + Y + Sbjct: 231 NGFGIALIPASWWNLTGMDALVKVSI-RKPVCKRTIWLSWMENHYLSQA 278 >UniRef50_Q12BP5 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12BP5_POLSJ Length = 319 Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 102/270 (37%), Gaps = 8/270 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F +LA + RAA ++H++ P IA+LE ++G LF R +++L++AG+ Sbjct: 4 RQIRYFTVLADELSFTRAARRLHVSQPPLSFQIASLEAELGARLFNRTSRSVALSEAGKA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQ 124 V RL + + +G+ ++ F Q I + V Sbjct: 64 FLPHAQAVLARLEEARGHVQRVASGLQGRVQVGLAGSHFLGPFPQFIQQFRLQRPAVEIA 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E + + L D +LD +S + L P+ + R R Sbjct: 124 LHEMKPSDHLQALRDGRLDLCVSRNPLEDAQISAALLWRD---PVVVALPPGHRLAARSR 180 Query: 185 QEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 L L++ ++ +R + + +A G P I + A ++ V G + Sbjct: 181 LRLAELKDEEFVFLRLDSSPFAARLFEA-CVQAGFAPHIAQQVVEVPAALNLVAAGLGVA 239 Query: 243 VIPHFAWRLVNPATLKYFDAPHRPMYMQEY 272 ++P +L A +P P Q Sbjct: 240 LVPASLAQLRADAVGICSLSPSMPKRAQAE 269 >UniRef50_Q28M96 Transcriptional regulator, LysR family n=3 Tax=Rhodobacteraceae RepID=Q28M96_JANSC Length = 297 Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 100/295 (33%), Gaps = 13/295 (4%) Query: 5 ISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAG 64 +++R F+ A+ + RAA+++ + ++I ALE ++ LF R + ++ + AG Sbjct: 4 DLRQIRYFVATAEELHFRRAADRLGIAQPALSRAIQALEAELDVALFVRTNRSVQITTAG 63 Query: 65 QELYQKLFPVYQRLSAIDNEIH-NSGRRSREIVIGIDN-TYPTIIFDQLISLGDKYEGVT 122 + + + E R + IG + + L +++ VT Sbjct: 64 RVFLDGAREILTLTERMLEETRTAHDGRMGALRIGYTDFAIAGELPSLLKHFQERHPRVT 123 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 +P I L + +LD + + + L S + R Sbjct: 124 LKPQHGVTQTQIRLLEEGKLDLGFVTGPIVRDGFDQRVVQSEALQA---VVPDSHPFAGR 180 Query: 183 QEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + L E ++ ++ +F + R G +P I+ ++ + V G Sbjct: 181 ATLSIADLAEEDFVHGSSRDWQHFYDYLLPMCRRAGFSPRIVQEAFNTAGILGLVSCGMG 240 Query: 241 LTVIPHFAWRLVNP--ATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 +TV+ + P + DA R + R + + + Sbjct: 241 VTVLTERVCSALGPGLVAIPITDADERLVTSAI----WRKDHLSGPARHFVEDLC 291 >UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=Veillonellaceae RepID=D1BNW2_VEIPT Length = 307 Score = 183 bits (464), Expect = 9e-45, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 105/293 (35%), Gaps = 13/293 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD ++ F+ +A + ++AA +H++ S ++I ALE+++G LF R ++ L Sbjct: 1 MDFH---HLKYFVEVADQKSFSKAARNLHISQSAISRTIKALEDELGVVLFMRNAKSVEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLI-SLGDKY 118 G V + + N R I IGI IF QL+ Y Sbjct: 58 TDGGTIFLTHAKRVVFMFEHLKTDFENEFRLEQGSIRIGIPPITDAPIFAQLLGEFKKVY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + + E V ++ + +D I + + E E+ ++ P + S Sbjct: 118 PQIELELYEQGSKKVEISVQEGLIDIGIICTKPNPK--EFESFYLTSDPLSVIIPKSSPL 175 Query: 179 YEERQ-EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 +E++ E+L + ++ ++ N I + G P I++ + V Sbjct: 176 AKEKEIRLEMLADESFV--LHKDDFNLHDEIIKACKHTGFQPHIVFETSQRDLMLQTVSA 233 Query: 238 GHFLTVIPHFAWRLVN---PATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 + ++P V K P P + + Y + + Sbjct: 234 NLAIALLPSRLCPEVGENTEVGSKVVVRPLVPEIIHTLYVIWKKGHYLSHASR 286 >UniRef50_C9XXC7 HTH-type transcriptional regulator budR n=7 Tax=Enterobacteriaceae RepID=C9XXC7_CROTZ Length = 290 Score = 183 bits (464), Expect = 9e-45, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 106/288 (36%), Gaps = 9/288 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +AQT + RAAE + ++ P + I LE ++G L R + L +AG+ Sbjct: 4 RYLRYFVAVAQTRHFTRAAELLGISQPPLSQQIQRLEREVGTPLLRRLTRGVELTEAGEA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNT--YPTIIFDQLISLGDKYEGVTA 123 YQ + A + R + + IGI ++ + IF L +Y +T Sbjct: 64 FYQDACQILALSDAALEKTRGIARGVNGTLSIGISSSNAFHPHIFSLLHEFQHRYPAITL 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 E + ++ +L + LD + NL + ++ P+ S R Sbjct: 124 LQQEANMASLMHDLEEGLLDAAFVRLPCESSKAF--NLRLIDIEPMVAALHRSHPLSGRD 181 Query: 184 EQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 E L L P + + ++ G+ P + + +S V G Sbjct: 182 EVALSELAGTPLILFPHEVAPGLYELVFNACLRAGLTPADSQQASQLSSSLSMVAAGFGF 241 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 T++P + +P F + + R + ++ + + Sbjct: 242 TLVPVSMQCIGHPE--VTFHRLSDQTLKTDIALAWRKFERSPSVRRLV 287 >UniRef50_A1K6J7 LysR-family transcriptional regulator n=5 Tax=Proteobacteria RepID=A1K6J7_AZOSB Length = 303 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 107/296 (36%), Gaps = 8/296 (2%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R FI +A+ NI RAA ++HM+ P + I LEE++ LF R + L Sbjct: 1 MDI---RQLRYFIAVAEEANIGRAATRLHMSQPPLTRQIQQLEEELDTQLFVRTPRGMEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGI-DNTYPTIIFDQLISLGDKY 118 +AG + + + +G+ + + I + I +++ ++Y Sbjct: 58 TQAGTLFLAEARNIRALIEQATERTQRAGQGKLGRLDVAIFGSAILDRIPKLILNFRNEY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V ++ I L ++ + E + L L + Sbjct: 118 PDVNVVLHTMTKAEQISALRQNRITVGFNRMLAPLPDIRSEVIATESL-LLAVNLNDPLA 176 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + ++L P + R NF + A G P + + ++ V G Sbjct: 177 AQPALPFDVLARRPVILFPSGARPNFVDKVLALCEARGFLPEVAQEVGDAVTGVALVASG 236 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSI-RNHRYTATMLQHIAEDR 293 + ++P A L P + Y P + L I R ++ + +A R Sbjct: 237 FGVCMVPESATTLQYP-GVVYLPFEDAPAEARVDLSCIYRADDHSPILSTFLASIR 291 >UniRef50_UPI0001A45942 HTH-type transcriptional regulator gltC n=1 Tax=Neisseria subflava NJ9703 RepID=UPI0001A45942 Length = 297 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 110/293 (37%), Gaps = 15/293 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTR----KDN 56 MD K + F L + + + A +++T K I +LEE++G L R K Sbjct: 1 MD---FKSLHCFAELIRLQSFSATASALNLTQPTVSKIIQSLEEELGVPLLCRENGRKKR 57 Query: 57 NISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLISLG 115 + G+E+Y+ + + + + +S + +G+ ++ L Sbjct: 58 QVQPTAIGEEVYRHALNLLHERDLLLARVDDYRHVKSGTLRLGLALFGSDLLSHALFDFH 117 Query: 116 DKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLV 175 K+ + +E + +L + +LD + Q ++ ++ +++T+ + P + L Sbjct: 118 QKWPDIELSFLEQGSLAIEQSLRNNELD---AGQLLAPVHEDFDSITLCDYPLVVLMPKN 174 Query: 176 SRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 R++ + LQ P++ F + I R G P ++ R + V Sbjct: 175 RARHDALTLKS-LQHEPFI--LFGAGFSLNETIQTACRNQGFTPNVVCRTGQWNLVADMV 231 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 + ++P + R +NP P + + + H+ L+ Sbjct: 232 AHNMGIALLPEYYARKINPDVFAAIPLVE-PEIRWQLTMAWKKHQRPTPALRA 283 >UniRef50_C0CQ02 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CQ02_9FIRM Length = 295 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 116/299 (38%), Gaps = 13/299 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ ++++ F+ LA+T + + A+ +++ + + I +LE Q+G LF R + L Sbjct: 1 MNL---RQLKYFVTLAETLSFTKTAQVFYISQTAVTQQIKSLESQLGVPLFRRTKRKVEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAI--DNEIHNSGRRSREIVIGIDNTY-PTIIFDQLISLGDK 117 AG + + ++ ++ +G S + IG+ Y + + + L + Sbjct: 58 TSAGAVFLPEAREILEKTQKAIVKTKLAYTGS-SDTLRIGVVQGYEHSDMPEALHRFRAQ 116 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 ++ + + L + +LD + + +++ N++ L L + Sbjct: 117 NPNISISIFRSDASDLYCALQEIRLDVAFNSRIAPGNLEDF-NISSHTLATYPLMVFLHP 175 Query: 178 RYEERQEQEL----LQELPWL-QMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 + +++E L P + + + + + G PTI+ ++ A + Sbjct: 176 SHPLVRKKECSLSDLNHEPLIFPDLRNDPSGYNKCLLDYFVQTGFVPTIVQESSNYEAIL 235 Query: 233 SAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 V + ++P +A L + + + + + N + T+ + ++ Sbjct: 236 LMVAASLGIAILPSYAHVLAHNLGNITAIPLTGEISSLDIVIAWHNQNHNPTIQKFLSA 294 >UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BX95_LISGR Length = 297 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 112/287 (39%), Gaps = 9/287 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ ++++ F+ +A ++ +A+E +H+ S + I LEE++G LF R N+ L Sbjct: 1 MEL---RQLKYFMEVASFEHMTQASENLHVAQSAVSRQITKLEEELGIKLFDRVGRNMQL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKY 118 G++ ++ Y L + + S + IG+ N+ + + +IS +Y Sbjct: 58 TTVGEDFLNQVKVAYNELLKAEAIVTEYSDPTKGSVRIGLPNSLASKVLPAVISAFRAEY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFI-ISPQHVSARVQELENLTISELPPLRLGFLVSR 177 VT VE S + L D ++D +SP V+ E +L ++ F + Sbjct: 118 PDVTYHFVEGSNAELKQLLLDGEIDITFLSPVPVTDDSVEAVKFFDEKL---KVIFPATH 174 Query: 178 RYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 +R L + + + + ++ I+ I ++ F V Sbjct: 175 PLADRYNVSLEELAAEKFILYPPNFDLFKIVTTAAEKKAISLDIAFQSQDFYTIQGLVGA 234 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTAT 284 G ++++P K ++ + L + + + T Sbjct: 235 GLGISILPEMILDGTIFKDTKALPLRNKELRRSVGLVVTKKRQLSPT 281 >UniRef50_A9HWS6 Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9HWS6_BORPD Length = 320 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 91/285 (31%), Gaps = 11/285 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ +A+ + RAAE +H+ SI LE +G L R +SL A Sbjct: 7 IDLRQLRQFVTIAELGSYRRAAEALHIAQPALSVSIQKLEHSVGVLLLERGAKGVSLTPA 66 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQ-LISLGDKYEGV 121 G L + +G + ++ + L + +Y V Sbjct: 67 GAALMDDARRALFHADQARQSARRVALGELGRLRLGFVGSATYMLLPRCLPAFRHRYPDV 126 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E S + + L +LD + ++ + E L L + Sbjct: 127 ELELREDSTVRLAEMLRANELDAGLVRGPLAEDTSLSAW--VVERDSLILALPAAHPLAG 184 Query: 182 RQ-EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + ++ P++ + A R G +P I +S V G Sbjct: 185 GPVSLQAVRSEPFVMYAPDKVPGLYGVAQALCRKAGFSPRISQEAIQVQTLVSLVASGLG 244 Query: 241 LTVIPHFAWRLVNP--ATLKYFDAPHRPMYMQEYLYSIRNHRYTA 283 + ++P P DA R S+ HR T+ Sbjct: 245 VALVPGVTRAYSTPHVVFADLLDADARDA----LALSLVAHRDTS 285 >UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D2L1_PELTS Length = 303 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 108/259 (41%), Gaps = 19/259 (7%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ K++ F+L+A+ + +AA +++M+ I ALEE + LF R D + L Sbjct: 1 MNL---KQLEAFLLVAELQSFTKAARQLYMSQPAVSFQIKALEEDLQVALFQRGDKKVIL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLI-SLGDKY 118 +AG+ LY + + + I + + + +V+G + LI +KY Sbjct: 58 TEAGRLLYPEAKQMLKHYQKIKVGLDDLRDLKKGHLVVGASTIPGEYLLPLLIGKFKEKY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 G+ V + +R++D I+ E E+L +L +V+ Sbjct: 118 PGIKITLKVSGSGQVGQWVREREIDLGIT-----GAFIEGESLECRPWIDDQLVLIVNPS 172 Query: 179 YEERQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTII---YRPYSFMAK 231 + + L+ P + ++ + I+ ++ C ++ I S A Sbjct: 173 HRWASLGAVQASELKNEPMIM--REHDSGTRRTIEKKLKECNLSLEKIPQGMELGSTRAV 230 Query: 232 ISAVERGHFLTVIPHFAWR 250 I+AVE G ++++ +A R Sbjct: 231 ITAVEAGLGVSIVSRYAAR 249 >UniRef50_Q46S95 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=Q46S95_RALEJ Length = 309 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 93/289 (32%), Gaps = 4/289 (1%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 I ++R FI + + + RAA ++ MT SP + I LEE +G LF R + L Sbjct: 2 IPDLNQLRCFIAVGEELHFGRAATRLFMTQSPLSRQIRMLEESLGVRLFDRNSRVVRLTA 61 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLG-DKYEG 120 AG L + + + S ++ +G + LI+ + Sbjct: 62 AGSALLDDARRLLALAGHAVDVARRIDKGVSGKVRVGFTAVAGYELVPNLIARAMQELPE 121 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + E I+ L +D + +SE L + + Sbjct: 122 IEVTLHEMVTVAQIEALQAGTIDLGFLRPLPDVDPELQWRPAVSEPLLLAMHATHALAAR 181 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 ER E L ++Q F +I + + G P ++ + + ++ V G Sbjct: 182 ERIAAEDLAGQTFIQYSATEGKYFHDLIGSVLAGAGRPPRVVQQMSQTHSVLALVRAGLG 241 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 L ++P A L P R E R+ Sbjct: 242 LALVPASARHLHFPG--VVLRPIWRDDVRAELRLVWRDANRNPACRVFA 288 >UniRef50_C5AIL5 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AIL5_BURGB Length = 309 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 97/261 (37%), Gaps = 8/261 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A+ RAAE++ M P + I LEE+IG+ LF R ++L AG+ Sbjct: 4 RHLRYFLAVAEEGQFTRAAERLAMQQPPLSQQIRLLEEEIGFDLFVRLPRGVALTPAGRA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP--TIIFDQLISLGDKYEGVTA 123 Q V L R I +G+ ++ + D + + G+ Sbjct: 64 FAQNAGLVLDTLQQGVAHARRIARGELGAIAVGLTSSAGFHPLTTDAIRAFRAANPGIEI 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSAR-----VQELENLTISELPPLRLGFLVSRR 178 E + +I+ L QL + V A Q L+ ++ LP Sbjct: 124 ALSERNAAELIEGLSHGQLQVAFLRKPVDAPSGVAFEQMLDEPMVAVLPVGHRLLAAIGD 183 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + L+ ++ +R A + A R G P + + + I V G Sbjct: 184 APPAIPLKALEPEAFILVRRPGAPGMYADLLAACRRHGFVPQVAHEVPRMLTGIHMVAAG 243 Query: 239 HFLTVIPHFAWRLVNPATLKY 259 +T++P R N +T+ Sbjct: 244 LGVTLVPASMRRYDNRSTVFC 264 >UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNC1_BORBR Length = 297 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 86/254 (33%), Gaps = 11/254 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + + F+ LA+ N RAA + H+ +P ++I ALE ++G TL R N+ L A Sbjct: 1 MNLRHVHYFVTLAEELNFTRAAARCHIEQAPLSRAIKALERELGLTLLIRNTRNVELTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIG-IDNTYPTIIFDQLISLGDKYEGV 121 G+ + L + + ++ I + +T ++ + + Y V Sbjct: 61 GRLFCDCARVALEELELGARRARRAQEGAIGQLTIAHVGSTVYELLPSIIRAFKRGYPLV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + + I L +D + L + L + + Sbjct: 121 DLRIRQLTTREQIPGLIAGDIDVGFVRVAPDSG-----QLAAARLYAEPFVCAIPDWHPL 175 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + + L P++ + + + R G P I + + V Sbjct: 176 AGRESVALGELASSPFIMLMRSPAPSLHQQVLDLCRKAGFEPRIAQEVEQIESTVGLVAS 235 Query: 238 GHFLTVIPHFAWRL 251 G + ++P +L Sbjct: 236 GIGVALVPASLRKL 249 >UniRef50_C6D3A4 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A4_PAESJ Length = 299 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 107/296 (36%), Gaps = 19/296 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ +++ FI + ++ + +A E++ +T + I LE + LF R + + Sbjct: 1 MEL---RQLEYFIQVCKSGSFTKAKEELGVTQPTLSQQIRVLEGEYNIQLFDRVSRGVEI 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSRE-IVIGIDNTYPTIIFDQLISLGDKYE 119 +AG+ L K + L NEI R E I IG + + K+ Sbjct: 58 TEAGKILLNKGNAIMNLLEEARNEIDGRNDRFGETIAIGCCPAELEYLAPFFMKFHQKHP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 + + ++ + ++++DF I+ VS +++ + L + LV + Sbjct: 118 NILLRIMDIENAE--KKVMEQRVDFGITAYPVSD-----DSVISTHLYRQEMALLVHSDH 170 Query: 180 EERQEQELLQELPWLQMRFQNRANFE----AMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + + P+ ++ N F ++ID G I S + + Sbjct: 171 SLADQTSI----PFQSLKQMNSIMFREQNKSLIDRYCFSYGFTLKSIIETSSTSVLLHWI 226 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 G +IP + +L+ Y L +++ +T I E Sbjct: 227 RHGLGAALIPTSLLESIRDDSLRIVKLEGHIPYWDISLLYLKSANMKSTARLFIQE 282 >UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI27_BREBN Length = 307 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 113/281 (40%), Gaps = 16/281 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ F+ + + + +RA+EK+ + S + I LE ++G LF R I+L +AG+ Sbjct: 4 RQLEYFMAICEEMHFSRASEKLCTSQSNLSQQIKFLENELGVPLFDRLGKRITLTEAGKV 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQ 124 L ++ V+ + I + IG+ ++FD L+ Y + Sbjct: 64 LLEQSRHVFSHIDYAREAIAAMKNNEGGTLTIGVLPGDADLLFDALLVEFHRLYPKTSLS 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 +E +++ + ++D ++ + E +T+ L V R + +E Sbjct: 124 VIE--STRIVEQITSGEIDLGVT-----VLPEPDERITVIPLFHEEFALAVHRAHPLAKE 176 Query: 185 QEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + + LQE+ + ++A +I+ G + +++S V++G Sbjct: 177 KAIKFGQLQEVKMVMFPPDHQA--RQLINRYCIQEGFRLQPHIETTTLQSQLSLVKKGIG 234 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRY 281 ++P + VN + + H P Q+ R +Y Sbjct: 235 GCILPSLLLQNVNDDEIAIINLLH-PTPSQDICLVYRKDKY 274 >UniRef50_A8FJ94 Possible LysR family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FJ94_BACP2 Length = 290 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 17/253 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M I+ + + F+ + + + +A EK+ +T S +IA LE ++G L R N ++L Sbjct: 1 MSTLITFQYKVFLTVVECGSFTKAGEKLGLTQSGVSHNIAKLESELGVVLLRRNRNGLAL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIH-NSGRRSREIVIGIDNTYPTIIFDQLIS-LGDKY 118 AG+ + + + S ++ E G I IG +++ + + QLI KY Sbjct: 61 TDAGERVMPHIRQIIHHASLLEQEAALIQGMEVGSIKIGTFSSFSSKMLPQLIHLFTKKY 120 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + + E + + + +D Q +E E + L L L+ Sbjct: 121 PNIQVELYEGGYEEIEEWIASGTIDVGFLTQPS----REFETI---PLFQDELVVLMQED 173 Query: 179 YE----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + E + L + ++ +A + +I ++ G+ P +++ IS Sbjct: 174 HRFNTKKVIEVDSLHDESFIM----PKAGCDLLIKKLLKERGVKPHVLFEIGDNNTLISM 229 Query: 235 VERGHFLTVIPHF 247 V+ G +T+IP Sbjct: 230 VQEGLGVTIIPTL 242 >UniRef50_A4JSC2 Transcriptional regulator, LysR family n=4 Tax=Burkholderia RepID=A4JSC2_BURVG Length = 303 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 107/290 (36%), Gaps = 15/290 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F+ +A+ + AAE + + P + I LE +IG LF R + L AG+ Sbjct: 4 RQLRYFLAVAEYLHFTEAAEFLGIAQPPLSQQILKLEREIGTRLFIRHPRRVELTDAGRL 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNT--YPTIIFDQLISLGDKYEGVTA 123 ++ + + E N+GR S +V+G + + + + Y V Sbjct: 64 FRERAKHIVEEAELALAEAQNAGRGLSGRLVLGFAGSIVFHPFVASLMQRFRRDYPDVLI 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 E + +ID + + ++D + + R L + L R ++ + Sbjct: 124 HCEESNSPALIDKVLEARVDAALVRLPLDCR-----GLAVQPLVEERFLAVLPSGHRHGA 178 Query: 184 EQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 E L L + P + I G PT+ A ++ V G Sbjct: 179 EPVLALHALSDDPLVLFPRAIGPALYDAIVGACWAAGFTPTVEMESPQIPASVNLVAAGF 238 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 +T+IP R + Y P+ + + + R + ++Q++ Sbjct: 239 GVTLIPES-VRQAPTDRVTYHGLQGEPL--RSPIVLVHRPREKSPVIQNL 285 >UniRef50_D0IWI0 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=D0IWI0_COMTE Length = 304 Score = 182 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 104/291 (35%), Gaps = 14/291 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + +R FI + + N RAAE +H+T K + ALE++ G L R+ + L Sbjct: 1 MDL---RALRYFIEVVRQNGFTRAAETLHVTQPTISKMVKALEDEFGGRLLLREGRGVQL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTIIFDQLISLGDKYE 119 AGQ +Y + + ++ + ++ +R ++ +GI T + + +Y Sbjct: 58 TDAGQVVYDRGMEILEQAQLLRRQVAEVDHITRGDLSLGIMPTTGHYMAPVIALFQQRYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPP-LRLGFLVSRR 178 GV Q E + + +LD + +A LE T++ + L Sbjct: 118 GVNLQVNEQGARAQYQLIQEGKLDMALGL--FAAPDPALERYTVARQKTRVVLPAQQVTD 175 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + L+ELP++ + + + G P + + + V Sbjct: 176 PGQPMRWSDLRELPFV--LYTSDFALHEHVLQQCEAAGFTPQVKLQTRYWDFIGHLVAAQ 233 Query: 239 HFLTVIPHFAWRLVNPATL--KYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 + V+ +P + + P P + R + Sbjct: 234 VGVAVMFEHVIARYDPQRVASRPLVEPEIP---WDVALMWRPGYLSRAAQA 281 >UniRef50_A6UMN5 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UMN5_SINMW Length = 296 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 92/249 (36%), Gaps = 11/249 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +++++ +A+ + RAA++++++ P K I LE ++G LF R + L A Sbjct: 1 MEHRLLQSYVAVAEELHFGRAAKRLNISQPPLTKQIQQLERELGVALFERTKRKVELTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G L ++ + ++ + + R + + +G + + ++ Y V Sbjct: 61 GSVLLEEARRLLRQTENAAELVRKTERGETGHLAVGFIDAAIYSLVPNVVECFTRSYPHV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 T + + + + + +LD + E L I + L V +R+ Sbjct: 121 TVELADLRIPDQVRGVSEGRLDVGFIHPPIRG-----EQLAIETVLVEPLVVAVPQRHRL 175 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 E+ L +Q I + G NP I+ I V Sbjct: 176 ASRAEIPLAELANEALIQFPRSINPTLYDEIIGLCQSSGFNPKIVREATPKQTIIGLVSV 235 Query: 238 GHFLTVIPH 246 G ++++P Sbjct: 236 GLGVSLLPR 244 >UniRef50_C1DMS0 Transcriptional regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DMS0_AZOVD Length = 307 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 103/294 (35%), Gaps = 11/294 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I ++++ F+ +A+ N RAAE++++T + I LEE I L R ++L Sbjct: 1 MEI---RQLKYFVAVAEELNFNRAAERLYITQPALSRQIQQLEEAIPAVLLERNSKRVAL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGI-DNTYPTIIFDQLISLGDKY 118 AGQ Y + + +L +E + +VIGI ++ I L+ G + Sbjct: 58 TDAGQAFYHQALNILAQLQRAADESRLLAEGKKGSLVIGIFGSSILDFIPRVLLEFGRTH 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V ++ I L +R+L + E E + L L Sbjct: 118 PAVEISLHPMDKDAQIQALRERRLTIGFNRLVPGEPDIEQELVRREAL---MLALPAKHP 174 Query: 179 YEERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 R EL + + P++ R + P + I+ V Sbjct: 175 LAARDAIELGEVLQEPFILYPRGVRRGLTTHVRRLFADYDALPRVAQEVTDVTTSIALVA 234 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 G L V+P A + ++Y R E R + + +A Sbjct: 235 GGLGLCVVPRSAVN-LRLPGVEYRALRCRGKAEIELACLYRKGDGSPLLRAFLA 287 >UniRef50_B5JK93 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JK93_9BACT Length = 293 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 105/244 (43%), Gaps = 9/244 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R FI +A N+ RAAEK+H++ + + LEE++G+ L R ++SL +AG+ Sbjct: 4 RHLRYFIEVALEENVTRAAEKLHVSQPALSRQVRDLEEELGFALLERSAKSVSLTEAGRV 63 Query: 67 LYQKLFPVYQRLS-AIDNEIHNSGRRSREIVIGIDNTYPT-IIFDQLISLGDKYEGVTAQ 124 + V +RL + + S EI +G + I+ + + +Y V + Sbjct: 64 FLDEASAVLERLEVGVAAARAAAEDGSGEIHVGYAPSLTVKILPPTIRAFQAEYPKVKVK 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ- 183 + S ++D L +LDF + ++V+ L + L + V R + Sbjct: 124 LYDMSTEEMLDGLRSGKLDFAFM---LESKVKTLASFLFRPLKREAIRLGVGRDHAWASG 180 Query: 184 ---EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + + L+ + + ++ +RP G+ + S + ++A+E G Sbjct: 181 GPVKVKDLKREALVGYNLSEYPEYGDLLGKVLRPAGMRVKLAEEHESVSSLVAAIEAGMG 240 Query: 241 LTVI 244 + V+ Sbjct: 241 VGVV 244 >UniRef50_B1M8F7 Transcriptional regulator, LysR family n=4 Tax=Rhizobiales RepID=B1M8F7_METRJ Length = 304 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 110/290 (37%), Gaps = 15/290 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F +A+ + AA+ + ++ P + I LE +IG LF R + L AG++ Sbjct: 8 RHLRYFAAVAEHLSFTAAAQSLGVSQPPLSQQIRDLEVEIGVNLFERSSRRVVLTAAGED 67 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQ 124 V ++S + G + + IG+ ++ LI + ++ V + Sbjct: 68 FLGNARAVLAQVSDAVDRARTIGTGAAGILNIGMTSSVLAGPAGCLIRAFEQRFRAVDVR 127 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ- 183 E + I L + D E +L P RL V R + Sbjct: 128 IHEMAPTDQIAALKANRTDLSFLRSPP-----EDPDLVAHMAWPERLCVAVPREHALAAG 182 Query: 184 ---EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 ++ + P + + ++ + F A I G P+I + + I+ V G Sbjct: 183 RSVAIDVFRSEPLISLGLES-SRFAADIYHACIQRGFTPSISQQVNEASSLINLVAAGFG 241 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 L +IP F R +P P +P ++ +Y++ + R + +A Sbjct: 242 LAIIPEFVGRARHP---DVVVLPIKPSFLSADVYALHHTRRNPVIDNFLA 288 >UniRef50_B9XJ57 Transcriptional regulator, LysR family n=2 Tax=bacterium Ellin514 RepID=B9XJ57_9BACT Length = 301 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 93/241 (38%), Gaps = 5/241 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F+ +A N +AA ++ + + + LE++IG L R ++L G+ Sbjct: 4 RHLRYFLAVADALNFTKAARQLRIAQPALSRRVQDLEDEIGVDLLKRSPRGVTLTAEGKL 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNT-YPTIIFDQLISLGDKYEGVTAQ 124 +K + + ++ R + IG + I+ L + + V Sbjct: 64 FLEKTRQLLKMADESVEQVRALARGQFGSLHIGYAPSPTVEILPPALAAYQRAFPHVNVL 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 + S ++D L D L + P+ V+ + +E + P + S + Sbjct: 124 LHDASRREIVDGLQDGTLQLAVLPEVVNMEAEGIEFEPLRSYP-YYVALSPSHPLTRLKA 182 Query: 185 QEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 L + P + + ++ ++ RP G+ P I S + I+AVE G ++ Sbjct: 183 IPLEKIANEPLVGFARHDYPDYYPFVERIFRPLGVTPKIAVECDSGSSLITAVETGRGVS 242 Query: 243 V 243 + Sbjct: 243 L 243 >UniRef50_B8K739 Transcriptional regulator, substrate-binding of LysR family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K739_VIBPA Length = 297 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 106/294 (36%), Gaps = 17/294 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ K++ F LA+T N +AA+++ + S SI LE+Q+G L R + +SL Sbjct: 1 MDL---KRLHYFNQLAKTGNFTKAADQLGIAQSALSTSIKKLEQQLGLKLVNRTERQMSL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFD-QLISLGDKY 118 GQ L + + + + + E+ G S I G + L Y Sbjct: 58 TAEGQVLLRHAKIILEDVEQAEKELQELKGLTSGVIKFGAPAMLASYFLPDALEQFKKAY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 G+ E + L + +LD + +E E + S L ++ V Sbjct: 118 PGIQINIHEAGTATLAQMLVNGELDLALIRGD-----REHEQIRQSLLAQDQIAACVPIS 172 Query: 179 YEERQEQELLQELPWLQ--MRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + + + + Q + F+N +++ + + P + + S V Sbjct: 173 HPFAKRSAITLDEFCQQPLVLFKNGYFLRETVNSYCQQNKLTPQVHFETNLPELLKSMVR 232 Query: 237 RGHFL-TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 R + T +P + LK P+ +Q + +H + + Sbjct: 233 RQVGIGTCLPILV---ADDPELKAIPFD-PPIPLQLGIGWKSSHYLSTAAKAFV 282 >UniRef50_B1K332 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=B1K332_BURCC Length = 302 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 95/251 (37%), Gaps = 11/251 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F+ +A RAA ++H+ P + I LE ++G+ LF R+ L G+ Sbjct: 4 RQLRYFLAVADEGQFTRAAARLHIQQPPLSQQIQELEHELGFALFVRQPRGAVLTAPGEI 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYP--TIIFDQLISLGDKYEGVTA 123 + V L+ + R + + + ++ + + + D Y G++ Sbjct: 64 FAARARTVLLELNNAVVHARRVAQGRIGTVRVALTSSAAFHPLTPTAIRNFRDMYPGISI 123 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE-- 181 + E + +I+ + + + D I + V + +L L R+ ++ + Sbjct: 124 EMSEVNAAEIIEMMLNGRADAAILRKPV----ETSADLRFELLAEERMLLVLPVGHRLIG 179 Query: 182 --RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 + L ++ +R A + G P ++ + I+ V G Sbjct: 180 GRSVSLKQLANESFIFVRRPGAPGMYADFIRACQAKGFEPHVVEEVPRMVTAINLVAAGG 239 Query: 240 FLTVIPHFAWR 250 ++++P R Sbjct: 240 GVSLVPASMQR 250 >UniRef50_B6B1G4 LysR family transcriptional regulatory protein n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B1G4_9RHOB Length = 326 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 108/295 (36%), Gaps = 14/295 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++R F+ +A+ + AAE++ M + I LE ++G+ LF R ++SL Sbjct: 1 MDL---RQLRAFVAVAEELHFRTAAERLGMAQAAISTKIKDLESELGFKLFFRTTRHVSL 57 Query: 61 NKAGQELYQKLFPVYQRLSA-IDNEIHNSGRRSREIVI-GIDNTYPTIIFDQLISLGDKY 118 +AG + + L + + R + I GID + L K+ Sbjct: 58 TQAGAVFLESVRDTLNTLENGVAAASAAADNRLDRLRIGGIDGALIWYLPPILRDFTAKF 117 Query: 119 EGVTAQPVEFSENG-VIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 V+ E S + ID+L +D + E L + + + Sbjct: 118 PSVSPTMTESSSSEDQIDSLESHHIDIAFFRPPTMRPGFKFELLLQERIY---VALPRNH 174 Query: 178 RYEERQEQELLQEL---PWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 R R ++EL P + R + +I G+ P II + Sbjct: 175 RLATRTGPVSIKELADDPVISYPIHARPHLNRLIVNGFAKAGVRPKIIMEVIDKFTTLQL 234 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V RG + +P + L P + + +Q + + R + T+ + + Sbjct: 235 VARGIGVAFVPEWIGALYLP-NMPLRPLAEEDLTLQFGV-AWRENDRNETLREFL 287 >UniRef50_B9JZE6 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9JZE6_AGRVS Length = 309 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 13/262 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + + +R + +A+ ++ RAAE++ + P + I ALE ++G TLF R+ ++L + Sbjct: 1 MIELRHLRYAVTVAEEGHLTRAAERLGLQQPPLSQQIKALETEVGVTLFIRQPRGMALTE 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNT--YPTIIFDQLISLGDKYE 119 AG + + + + R E+ IG + + ++ + ++ Sbjct: 61 AGVAFIARARQILADVDMAVEAAQRAARGEIGELAIGFTTSAVFHPLVPSIVRAMRLSSP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 + + E S ++ L +LD A L+I + + + + Sbjct: 121 SLKLRLDEGSTTELLCELSAGRLDAAFIRATAGALPGSGPTLSIETVDIEDMVLALPDTH 180 Query: 180 EERQEQE----------LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFM 229 + L ++ R I A + G +P + + Sbjct: 181 PLALHSQNGDRDTVALAALAGETFVLYRRPLAQGLYDRIIAACQAAGFSPNVAQEAPKLV 240 Query: 230 AKISAVERGHFLTVIPHFAWRL 251 + +S V G L++IP RL Sbjct: 241 STLSLVAAGLGLSIIPQSMARL 262 >UniRef50_A9C1Z6 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C1Z6_DELAS Length = 295 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 106/289 (36%), Gaps = 13/289 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++R+F+ LA+T N +AAE++HM+ P +SI LE+ +G LF R +L Sbjct: 1 MDL---RQLRHFVTLARTLNYRQAAEQLHMSQPPLSQSIRRLEDSLGVQLFQRDRRGTAL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLI-SLGDKY 118 +AG + + + G + IG + + +L+ + +Y Sbjct: 58 TEAGLAALESAELALHHARQMQEVSRATAGGERGRLHIGFIGSATFSLIPRLVQAFRSEY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + E + + + D + V+ +L+I+ + L ++ Sbjct: 118 PLIDLVLTESTTREICAQVASGDFDAGLLRYPVTQAT----DLSITPVEKDELVAVLPEG 173 Query: 179 YEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 Q L L + P++ R A++ + G P + +S Sbjct: 174 NPLLQRPALRLRDLADQPFINYRPSEVPGLHALVVLACQNAGFMPQVKQHAVQAQTLVSL 233 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTA 283 V G + ++P + P + A + ++ + A Sbjct: 234 VGAGLGVALVPAVVAKGSTPGVVFRALADTENLPSIGLALALNPQQSAA 282 >UniRef50_C7JHS5 Transcriptional regulator LysR n=7 Tax=Acetobacter pasteurianus RepID=C7JHS5_ACEP3 Length = 302 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 91/256 (35%), Gaps = 11/256 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++R F+ +A+ + RAA +++MT P + I LE +G L R + L + Sbjct: 1 MLQLTQVRCFVAVAEELHFGRAAARLNMTQPPLSRQIQLLEHSLGVELLERTSRVVRLTQ 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLI-SLGDKYEG 120 AG ++ + + +GR + +I IG +LI +L Y Sbjct: 61 AGSVFLKEGRRLLRNAEDAALATRRAGRGALGQIAIGFTPGCSYDFLPRLIAALRHHYPD 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E + L R++D H A E + + + + Sbjct: 121 VELMLEEMITRDQLSALASRRIDVGFIRPHFDAPDIER-----RRIIKEPMLAAIPEDHP 175 Query: 181 ER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 L+ + F ++ + GI P +I+ A +S V+ Sbjct: 176 LALLDVIMPSDLEGQEMIMYSVLGGGYFHDLVHRLLISSGIQPKLIHHLTQINAVMSLVK 235 Query: 237 RGHFLTVIPHFAWRLV 252 G + ++P A RL Sbjct: 236 TGMGVALVPQSASRLG 251 >UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8DKN9_DESVM Length = 699 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 102/278 (36%), Gaps = 11/278 (3%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F +A+ + RAA +++ S IAALE ++G LF R ++L +AG+ Sbjct: 4 RDLRTFAAVARLLSFHRAAAELNAAQSTVSARIAALETELGVRLFERLGRRVALTEAGER 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTI-IFDQLISLGDKYEGVTAQP 125 L Q + + R + + + + + + + ++ V Sbjct: 64 LVQYAAKLIDVEDEARAWVTGESRLRGLLTVRVPESLCAYRLPPVIAAFRRRHPEVALHL 123 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE-ERQE 184 + NG+ +L D V A +L + L L + + + ++ Sbjct: 124 TACTLNGLEKDLRQGITDLAF----VMADSVRGGDLNVEALGVEPLVLVAAPHHPLAARD 179 Query: 185 QELLQELPWLQMRFQ-NRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTV 243 + + ++L + + + +I+ + GI P S A V G +T+ Sbjct: 180 RVVARDLHGITLVLSTTDCAYRTVIEEALAAEGIQPAAGLEFSSASALRGCVASGVGITL 239 Query: 244 IPHFAWR-LVNPATLKYFDAPHRPMYMQEYLYSIRNHR 280 +P A R + TL+ +P + HR Sbjct: 240 LPEAAVRDELRAGTLRALAWADQPFETAVLMV---RHR 274 >UniRef50_B2JL76 Transcriptional regulator, LysR family n=10 Tax=Burkholderia RepID=B2JL76_BURP8 Length = 335 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 110/270 (40%), Gaps = 15/270 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ ++++ F+ + + ++++AAE++ + + I LE ++ L R ++ Sbjct: 1 MDV---RQLKYFVTIVDSCSLSKAAERLFVAQPSLSQQILNLEAELKAQLLIRSPQGVAP 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTII-FDQLISLGDKY 118 +AG+ LY+ V +R+ I E+ + G S + IG T +++ + KY Sbjct: 58 TEAGKALYRLSRDVLRRMDQIRQEVQDGGGSESGTVAIGFPTTIASVLAAPLFQRVRQKY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 G+ Q E + + L + +LD I + + + L +L +G VS+ Sbjct: 118 PGIRLQIFESMSGYITELLANGRLDLAILFRDTESLGVSVHPLFDEDL--YVVGHPVSKL 175 Query: 179 YEERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + + L L +P + N +I+ ++ I+ S + E Sbjct: 176 CVDDEVCPLKFLGNVPLVTPGPTN--GLRLLIERTFSRADVDLNIVADIDSLPTMLDIAE 233 Query: 237 RGHFLTVIP--HFAWRLVN--PATLKYFDA 262 G TV+P A R N P K D Sbjct: 234 SGVACTVLPASALARRHFNNRPPIRKIVDP 263 >UniRef50_C0BFC4 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BFC4_9FIRM Length = 282 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 105/288 (36%), Gaps = 12/288 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ F +A T +I AA K++M+ P I LE ++ LF R + L AG+ Sbjct: 4 RQLEYFREIANTGSINEAARKLNMSQPPLSYQIRQLENELNVQLFERTHKGVILTAAGKL 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPV 126 LY + + + + E+ +G++ R + IGI T + + K V + Sbjct: 64 LYDRAASLLDYARSTELEVSQTGKK-RVLRIGITPTTVGTVMPFIAEFSKKNPDVNFEVH 122 Query: 127 EFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFL-VSRRYEERQEQ 185 + + D L + +D + + R+ ++E+ + P + + + + Sbjct: 123 DGITYTLYDYLQEGIIDISVVRTPL--RLDDVESAVLHSEPMIAVSNPEMPSEGRKSLIL 180 Query: 186 ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIP 245 E L P + R +E +I + P + V+ G + P Sbjct: 181 EDLVHRPLILYR-----RYEKLIMDAFHVQNLVPEVFCLCDDARGATLWVKEGLATAIFP 235 Query: 246 HFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 L T + D P + + L + R ++Q + Sbjct: 236 QSMEPLCEGLTCQVLD---EPDLVTKILLIWQKGRKPTAVVQDFMDVC 280 >UniRef50_C7JCS7 Transcriptional regulator LysR n=11 Tax=Proteobacteria RepID=C7JCS7_ACEP3 Length = 313 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 109/296 (36%), Gaps = 16/296 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + +R F+ +A+ +I AAE + + P + I LE +G TLF R+ + L Sbjct: 1 MDI---RHLRYFVTVAEHGSITHAAEALGIEQPPLSQQIRQLERNLGVTLFERQTRGMKL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYP--TIIFDQLISLGDK 117 + G+ L + + + + R I +G+ P +I + + Sbjct: 58 TEIGEVLLPRARTILDLQAQFLSTAEGLARGERGHIRVGLAGAVPLLPVIPLTIRRFREM 117 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 VT E + + L + +D I + + L++ L + R Sbjct: 118 APDVTLSLEESNTPALCAALHEPSVDIAI----IRPPFTDPSRLSVFHLLDEPTVIALPR 173 Query: 178 RYEERQEQ----ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 + +E +++ + P + + F I + + G+ PT+ + + Sbjct: 174 GHRLAKEPIISLDMVADDPLIIFPRELGPGFHDAILSAYQLAGVTPTMGQQAPQIAGTVP 233 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V G ++V+P ++ A F A P +IR + + + + Sbjct: 234 LVAAGLGVSVVPRSLSQI--HAGGVTFHAISEPAPRATLAVAIRTGQNMPLVTRFV 287 >UniRef50_A9BWC5 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=A9BWC5_DELAS Length = 319 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 107/292 (36%), Gaps = 6/292 (2%) Query: 2 DIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLN 61 D+ +++R F+ + + +I RAAE++ M P + + LE ++G L R + Sbjct: 17 DVPELRQLRAFVAITEEGHITRAAERLGMQQPPLTRLLQGLEHELGVELVQRLPRGVRPT 76 Query: 62 KAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYP--TIIFDQLISLGDKY 118 AG L ++ + +R + + + R + + +G ++ + L + Sbjct: 77 AAGLALLEESKALLERCDVLAEVVRRAARGETGRLAVGFTSSAALHPFVPGVLRMFRQQV 136 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFII--SPQHVSARVQELENLTISELPPLRLGFLVS 176 GV E ++D L +LD SP H S +Q + L L L G ++ Sbjct: 137 PGVAVALEEAGTGELMDALLHERLDAAFVRSPLHGSQGLQAVPILEEPMLLALPAGHALA 196 Query: 177 RRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 R L ++ R + I G +P ++ A +S V Sbjct: 197 RPLRRPVPLPQLASEDFVLYRRRVGQGLYDAILKACLEAGFSPRVVQEAPRMTATLSLVS 256 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G L+++P R + + Y P + R +A + + Sbjct: 257 AGLGLSIVPASMQR-LRSDGIVYRALSQCPGLAAPLHLATRVGDASAVLRRF 307 >UniRef50_A3VLP1 LysR family transcriptional regulatory protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLP1_9RHOB Length = 325 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 93/258 (36%), Gaps = 4/258 (1%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++R F+ +A+ N RAAE++ + P + I +LE Q+G LF R + L G E Sbjct: 13 RQLRYFLAVAEELNFTRAAERMGIAQPPLSQQIISLEHQLGAKLFIRSCRRVKLTAEGIE 72 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIG-IDNTYPTIIFDQLISLGDKYEGVTAQ 124 L + I + ++ +I +G + + +++ L + GV Sbjct: 73 LQAYARRIINTTMLATESIRSIANGKNGQIALGSVCSAIHSLVPHILPPFAALHPGVRVH 132 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E + L + ++D I + ++ + L R R Sbjct: 133 LQEMTVKEQFRALNEERIDIAIVREPMATTEFATQPLFTEPFVAAVNRNSPLARMN-RLS 191 Query: 185 QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVI 244 E + P +Q+ + + + + G ++ + + V G ++++ Sbjct: 192 LEQIAREPLVQVYRSANREYSDHMFSALMEQGYELNVVCEASDMHSLLGLVASGIGVSLV 251 Query: 245 PHFAWRLVNPATLKYFDA 262 P + A + Y Sbjct: 252 PASLVNI-QTANVIYVPL 268 >UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0W9_PAESJ Length = 296 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 103/285 (36%), Gaps = 15/285 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I +++ F + + RAA+K+ +T I LEE++G LF R I+L Sbjct: 1 MEI---RQLEYFQAICDELHFTRAADKLGITQPTMSYQIKQLEEELGVPLFHRIGKKIAL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIG-IDNTYPTIIFDQLISLGDKY 118 +AG L +++ + EI + IG + ++ L+ +KY Sbjct: 58 TEAGFILLNHSRNIFRSIDGAREEISELHHMERGSLTIGTLIGEINDLVSGLLVDFHNKY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 G++ + + V+D L +LDF ++ V + + + L F+ Sbjct: 118 PGISIKLLAL--EDVVDPLLQDELDFAVTIFPV-----DDDRFSKVSLYEEEFYFVAHSN 170 Query: 179 YEERQEQELLQELPWLQ--MRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 E + E + + F +ID G+ + + + +S V+ Sbjct: 171 SPLSGEPSVTIEEAMKEPIIMFPKTHRCRQLIDTVCSMHGVAWEPVIETSAIKSILSLVQ 230 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRY 281 G +++ L + P +E + RY Sbjct: 231 SGAGASILSKTLLELYPDQNM-IMIPISNPSLRREVGIAYLKDRY 274 >UniRef50_B0C1S6 Transcriptional regulator, LysR family n=2 Tax=Cyanobacteria RepID=B0C1S6_ACAM1 Length = 298 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 100/291 (34%), Gaps = 6/291 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++++F++LA+ + RAA+++ +T K I LE+ +G LF R ++L AGQ Sbjct: 8 RQLQSFVVLAEELHFGRAADRLDITQPALSKQILVLEKAVGVQLFFRTKRTVTLTHAGQT 67 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLIS-LGDKYEGVTAQ 124 + + + +G ++ IG T + QL+ +Y V Sbjct: 68 FLHQARQLLLQRDQAILLTRRTGDGEIGQLSIGFTKTATQTVLPQLLRQFVQRYPEVDLD 127 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E + + L +D + R +L + ++E L + + Sbjct: 128 LRELATEAQVTALNQDNIDVAFLHPPIDQRGLQL-QIILAESFVAVLPPQHPFVHLDAIP 186 Query: 185 QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVI 244 E P + + + G P II + ++ V G +T + Sbjct: 187 LEAFANEPLIVHPRREGPILYDGFQQVCQRAGFQPNIIKESITLQTRLCLVAAGLGITFV 246 Query: 245 PHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDG 295 RL P + +Q + +LQ+ E G Sbjct: 247 SD---RLQALVGTNVVCRPIQDCPIQLEFGAAWRQNAANPVLQNFLELLVG 294 >UniRef50_B9Z173 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z173_9NEIS Length = 296 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 109/291 (37%), Gaps = 11/291 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI K +R FI + + + RAA+ + +T K + LEE++G L R+ + L Sbjct: 1 MDI---KALRYFIEVVRRQSFTRAADALFVTQPTISKMVKHLEEELGVPLIIREGRSFQL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIF-DQLISLGDKY 118 + AG+ Y++ V +S + E+ + S E+++G+ F + S Y Sbjct: 58 SDAGKVAYERGQDVLAAMSRLKTELSDLSALTRGELIVGLPPMVGGAFFAPVVSSFRAHY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + VE+ + N+ QL+ ++ V +V + L + SR Sbjct: 118 PNVELKMVEYGARSIESNIRSGQLEIGVAVLPVDRQVFNTFSFVRDRLC--LVAPDQSRW 175 Query: 179 YEER-QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + +R + + + P + + + ++ R G I R + + VE Sbjct: 176 HGQRNIKLADIADEPIV--FYPEDFSLSTLVSQGFRRLGKTIHIAGRSAHWDFIAAMVEA 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 + ++P + + + + + Y + + Sbjct: 234 RLGIALLPESVAARLYGRPFDVIPLDEKEI-IWHLALIWQKDVYLSHAARA 283 >UniRef50_C4WNV4 Probable cat1 operon transcriptional activator n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WNV4_9RHIZ Length = 309 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 111/285 (38%), Gaps = 16/285 (5%) Query: 1 MD---IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNN 57 MD + +R F+ +A N AA+++ ++ P I LE ++G LF R Sbjct: 1 MDGGETMELRHLRYFLAVADALNFTTAAQRLGISQPPLSHQIKLLEIELGVDLFERSSRR 60 Query: 58 ISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLIS-LG 115 ++L KAG+ ++ + +++ + G+ S + IG+ + F +++ Sbjct: 61 VTLTKAGEVFRRRALSILEQVKMASEHARSIGQGNSGVLNIGLTGSILIGHFAHIMNTFC 120 Query: 116 DKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLV 175 +Y V + E S I L + + I E +LT+ P ++ ++ Sbjct: 121 AQYPDVEVRTHEMSPGEQIIALKAGRTELSILRSPP-----EDSDLTLELAWPEKIVVVL 175 Query: 176 SRRYE----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAK 231 S + E E L ++ +R + + F + G P+I + + Sbjct: 176 SADHRLAHHESIRLEWLNNEKYVSLRLAD-SRFANYLLNACIANGFVPSITQQVVESYSL 234 Query: 232 ISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSI 276 +S V G + + P +L P + Y H P+ Y S+ Sbjct: 235 LSLVAAGFGVALAPESVSQLSRP-NVIYRTLQHPPLVADVYAVSL 278 >UniRef50_Q2RLB0 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLB0_MOOTA Length = 297 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 104/265 (39%), Gaps = 13/265 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I + F +AQ +I+ AA +HM+ S I LE+ + LFTR + L Sbjct: 1 MNIN---HLEAFCTVAQVKSISEAARILHMSQSSLSYQIQLLEKDLDVELFTRTTKGVEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFD-QLISLGDKYE 119 + G+ +Y+ Q + ++ N +++G ++ + + S +KY Sbjct: 58 TEMGEIVYEYGQTFLQLAENLRRDLDNWKSGQEHLIVGASSSIGSYALPCTIYSFKEKYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 + + + I L D+ +D + V +T EL L + Sbjct: 118 DANVKLLVGNREETIQKLLDKTIDIGLIEGPVDQPGLATRGVTEDEL---LLIVPAGWQG 174 Query: 180 EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGI---NPTIIYRPYSFMAKISAVE 236 +E E L LP + + + +I + G+ N ++ S A SA+ Sbjct: 175 QESITLEELCRLPLI--LREEGSGTRQVIARALAEHGLGIANLNVVLELNSNDAIKSAIT 232 Query: 237 RGHFLTVIPHFAWRL-VNPATLKYF 260 GH ++++ A R ++ +LK Sbjct: 233 AGHGVSLLSRLATRREIHNGSLKAL 257 >UniRef50_B1ZQE5 Transcriptional regulator, LysR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZQE5_OPITP Length = 291 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 99/267 (37%), Gaps = 8/267 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F +A+T + +RAAE++H+T + I LE ++G TL R L AG+ Sbjct: 4 RHLRYFCAVAETLHFSRAAERLHVTQPALSRQIRDLEAELGVTLLRRHHTATVLTPAGEA 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIF-DQLISLGDKYEGVTAQP 125 ++ + +E +G R++ G T T F L ++ G QP Sbjct: 64 FLRRAREILAAAGEAVSEARQAG---RQLRFGHYGTLWTECFGPALRRFAKQHPGCALQP 120 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 +E ++ L ++LD + A +E + L ++L +R+ Sbjct: 121 IELMPVELVAALRRQELDIALIGTVTRALQREFATQPLCTL-EMQLALAADHPLAKRRLL 179 Query: 186 EL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL-T 242 L L++ W+ ++ R G P I+ S + AV + Sbjct: 180 ALADLRDADWIAWDEAGFPGRAELLRDAARAAGFAPRIVGTVDSVASMFVAVATSRAVGC 239 Query: 243 VIPHFAWRLVNPATLKYFDAPHRPMYM 269 V+P + P P M Sbjct: 240 VLPMSRKLPHSGVVFARLRPPGIPFTM 266 >UniRef50_B0PCN4 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0PCN4_9FIRM Length = 298 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 103/270 (38%), Gaps = 19/270 (7%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 K++ F+ +A+ N+ RAA+ ++++ P + +LE+++G LF R ++ + A Sbjct: 1 MTLKQLEYFLEIARLGNVTRAAQSLNISQPPLSLQLKSLEDELGTPLFRRDKRHLEITPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G+ L ++ + L +IH + + I + + LI+ Y V Sbjct: 61 GKLLQERAQAILALLDETTGDIHALSTEKQITLRIATIGSVNNRLLPNLIARFSRDYFYV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSA---RVQELENLTISELPPLRLGFLVSRR 178 + +E V++++ +DF + + R + + ++ + + Sbjct: 121 NFRVIEGRTEHVLEHVTSGDVDFGFVREPFNTSHFRSVLIHDPALAPGQSDHFVTIAQPQ 180 Query: 179 Y---------EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFM 229 + + E + L++ P + + MI R G NP II Sbjct: 181 FYDAYYEGDSRDTIEIDELKDKPLII-----HQRYREMILGACRKRGFNPYIICENDEIH 235 Query: 230 AKISAVERGHFLTVIPHFAWRLVNPATLKY 259 + +S G + + P+ + L L Sbjct: 236 SSLSWARAGIGIAIAPYTSAILSIDPGLVI 265 >UniRef50_B0NJV3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJV3_EUBSP Length = 295 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 111/292 (38%), Gaps = 6/292 (2%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +++ F+ +AQ + +AA + +++ + + I ALEE + LF R ++L A Sbjct: 1 MNTNQLKYFVAVAQYRSFTKAANQYYISQTAITQQIRALEESMNVQLFNRSSRPVALTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTI-IFDQLISLGDKYEGV 121 G+ + + + +R+ +++ ++ + IG Y + ++L + +Y + Sbjct: 61 GRIFFLEAKAILERMETAVSKVKDASTGLVGTLRIGYTKGYERSDLSNKLRAFHLEYPNI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + LF+ + D I + + + + I E PL + + + Sbjct: 121 LLTCYRCDTDRLAAGLFNNEYDIIFTWDSTNILQEHTISHKIIERAPLVVALYSGHPFAQ 180 Query: 182 RQ---EQELLQELPWLQMRFQNRANF-EAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 R +EL E +F ++ + G P I++R + + V Sbjct: 181 RSALNRRELKNEAILYMTPSSTGDSFGDSHFMDLYKEAGYQPNILFRSNDVESILMMVAA 240 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 ++V+P + + A F +E + + T + + Sbjct: 241 EEGISVMPSYITNKLTNADNLVFIPLIGEEEAEEIIAVWKQGELTPELRHFV 292 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 106/277 (38%), Gaps = 15/277 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + ++++ F +A+ + +RAAE + ++ I +LE+ +G LF R + L Sbjct: 1 MDVSL-RQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVEL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGIDNTYPTIIFDQ-LISLGDKY 118 +AG++L + L +H + ++ + T + + L + Y Sbjct: 60 TEAGRQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAASTTAGIYVVPKALGAFHRAY 119 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 GV + V L D I +++ ++L I + P L + S R Sbjct: 120 PGVELSLDVLNRFAVHQRLLAGDADVAIM-----GLIEDPQDLEIEQFLPNELVVIASPR 174 Query: 179 YEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + ++ + P+ + + + A ++ G++P + S A A Sbjct: 175 HHLARRHQIPLDEIAREPF--LVREIGSGTRADMERIFAEAGLSPRVAMELRSNGAIKQA 232 Query: 235 VERGHFLTVIPHFAWRL-VNPATLKYFDAPHRPMYMQ 270 V + V+P A L + L D P+ Sbjct: 233 VAADLGVAVMPRDAIGLELETGRLIVLDVQGFPVRRW 269 >UniRef50_O33945 Probable cat1 operon transcriptional activator n=9 Tax=Proteobacteria RepID=CATR_ACILW Length = 303 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 97/272 (35%), Gaps = 7/272 (2%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ ++ R F+ +A+ N RAA ++++ P + I LEE++G L R + L Sbjct: 1 MDL---RQFRYFVAVARERNFTRAARQLNIAQPPLSRQIQLLEEEVGVPLLIRNSRPVQL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSRE-IVIG-IDNTYPTIIFDQLISLGDKY 118 AG+ +++ V R+ + G R + IG + +T ++ + L Sbjct: 58 TDAGRLFFEQAIQVLGRVEQMQAATRRVGLHQRSVLSIGFVASTLYGVLPTLMRKLRQHA 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISEL-PPLRLGFLVSR 177 + Q VE I + + ++D H S L L L + ++R Sbjct: 118 PELDIQMVELMSVQQIQAINEGRIDIGFGRVHHSDPNVSSIVLHEERLAVALPMESPMAR 177 Query: 178 RYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + L + + R F + + + P + + V Sbjct: 178 ESTPLPVHQ-LAGEKLIVYPKEPRPGFADQVLNILDRHDVQPGQVMEVREIQTALGLVAA 236 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYM 269 + VIP A ++ + + D + Sbjct: 237 EFGVCVIPASARQMRHDVHYRLIDGDRATSPV 268 >UniRef50_A0NPE1 Transcriptional regulator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NPE1_9RHOB Length = 307 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 55/287 (19%), Positives = 108/287 (37%), Gaps = 13/287 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R F + ++ RAAE +H+ + +EEQ+G L TR + ++ Sbjct: 1 MDI---RQLRYFQEIVAQGSLTRAAESLHVAQPALSLHLKNMEEQLGTRLLTRSRSGVTP 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTII-FDQLISLGDKY 118 +AG L Q+ + + L+ +++I N S + IG+ T + +++ +++ Sbjct: 58 TEAGDLLLQRARTILEDLARTEDDIRNLEADPSGVVRIGLPGTISATVSLPLILAARERF 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 +T E V D L + ++D + + +SEL ++ Sbjct: 118 PRITLNIREAMSGFVGDWLSEGKVDLAVLYSRSKDKR------ILSELLLEEELVVLWPG 171 Query: 179 YEERQEQELLQELPWLQMRFQNRA-NFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L +L + M + A +ID+ + G P I SF V Sbjct: 172 EAGCLPVMSLGDLEKVPMVLPSGAHGLRVLIDSEFQALGFAPEIAMEIDSFNNIKRLVAA 231 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTAT 284 G +++P +A A P + + + T Sbjct: 232 GFGPSILPLYAVTEEVAAGTLCVSRIAAP-GLWRGAHLMSPGGRPVT 277 >UniRef50_D2Q131 Transcriptional regulator, LysR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q131_9ACTO Length = 298 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 106/293 (36%), Gaps = 12/293 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++++F+++A+ N+ RAA ++H+T + IAALE +G LF R L AG+ Sbjct: 4 RQLQSFVVVAEELNVGRAATRLHLTQPSLSRQIAALERDLGVELFARIRKRFVLTAAGES 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLI-SLGDKYEGVTAQ 124 L + +R + + R + + + + +L+ + D + V Sbjct: 64 LLADARDLLRRADDAVRDAQRTQRGELGTLRLRFVQSATFEVLPKLLGAFRDSHPQVVLD 123 Query: 125 PVEFSENGVIDNLFDRQLDFII----SPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + ++ L D ++D + P + E L + L ++ ++ Sbjct: 124 LETMTTLRQVEALKDGRIDVGLLRLPEPGTQLGDTKPAEGLASRVVSRDPLVAVLPAKHP 183 Query: 181 ERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + + + L ++ + I R G P+I +S V Sbjct: 184 LARRRRIRLAELAAEDFVFYTRPSGPAVHDRIVGYCRDAGFTPSITQAAADVQTIVSLVA 243 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G ++++ +P + Y + + E + + + + + Sbjct: 244 AGLGVSLL-IAPTPRTDPEAVVYREL-SDDLPPWELSLAWSPDNRSPVLQRFL 294 >UniRef50_C7GBJ0 Transcriptional regulator, LysR family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBJ0_9FIRM Length = 298 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 102/293 (34%), Gaps = 15/293 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++F ++R F+ LA+ + +AA ++ +T +I+ LE ++G LF + N +L Sbjct: 1 MNLF---QLRYFVTLAKMQHYTKAAHELCITQPSLSHAISQLEAELGVALFEKSGRNTTL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYE 119 G+E L + + + S R I +G+ + QL + + Sbjct: 58 TSFGEEFLICANRTLATLDSGVSSLQRSARGDGLIRLGMLRSLGVSFIPQLAARYLASHP 117 Query: 120 --GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 V S +++ L R D I E E+L + L +V Sbjct: 118 EHDVRFTFHTGSTGDLVNGLSARDYDLIFCSMPP-----ETESLDTVPITHEDLVLIVPG 172 Query: 178 RYE--ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + +Q L + L + Q+ F + + A++D P I Y Sbjct: 173 HHPLAAKQSVALTETLIYPQIYFSHGSGMRAVVDHLFSQINAVPQIAYETEEAEVIAGLT 232 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 +G + V+P+ L +K Y+ R + Sbjct: 233 AQGFGIAVVPYMDLLLK--LDVKILQISAPVWERNLYMIHDRQAFMPPAVRNF 283 >UniRef50_C9PFK4 Transcriptional regulator substrate-binding of LysR family protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFK4_VIBFU Length = 304 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 104/299 (34%), Gaps = 16/299 (5%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 K+++ F+ LA N + A+++++ S S+ LE++IG L R + I L G Sbjct: 4 KRLQYFVALAANGNFTKTADQLNIAQSALSVSMQKLEKEIGLKLINRTNRQIQLTSDGMR 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFD-QLISLGDKYEGVTAQ 124 L + + ++ + E+ G +I G+ + F L + + Y + Sbjct: 64 LLFHARRILEDVALAEIEMDELKGLERGKIDFGVSAMLGSYFFPEALAAFTETYPNIRIH 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLV--SRRYEER 182 E + L + LD Q LE L L P + V S + +R Sbjct: 124 IQEHGTATLEKMLLEGALDLAFVRTD-----QPLEQLRYVALCPEEIVACVNKSHPFAQR 178 Query: 183 QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 E L Q + F++ I R I P I Y + +++ ++ Sbjct: 179 SEVSLEQFCQQPLILFRDGYLLREAISRYCRNNNITPDIRYETNLIELVKALLKKDIGIS 238 Query: 243 VIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA---EDRDGTSH 298 R + P P E+ ++ Y + + ED T+H Sbjct: 239 ----TCLRRIIHDNEPLVCVPFNPPIKVEFGIGWKSSHYLSNAARAFLKFMEDWHKTNH 293 >UniRef50_P37499 Uncharacterized HTH-type transcriptional regulator yybE n=4 Tax=Bacillales RepID=YYBE_BACSU Length = 292 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 97/250 (38%), Gaps = 13/250 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F LA+ ++ +AA+ + +T +SIA LE +G LF R+ +ISLN+ Sbjct: 1 MEWEQLEYFQTLARMQHVTKAAKSLSITQPALSRSIARLENHLGVPLFDRQGRSISLNQY 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 G +++ + + + EI + + +G +T T + LI S +Y + Sbjct: 61 GHIFLRRVQAMMKEYTEGKEEIQALLKPDQGVVSLGFLHTLGTTLVPDLIGSFQQEYPNI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + Q + +++ L LD + A ++ + +L L V + Sbjct: 121 SFQLKQNHSYWLLERLKSGDLDLCL-----LASIKPENPIQWIKLWSEELFVFVPNDHPL 175 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + + + ++ ++ +D I P I++ V Sbjct: 176 ASRESITLNEIAGERFILLK--KGYALRMTVDELFEKANIQPNIMFEGEEATTAAGFVAA 233 Query: 238 GHFLTVIPHF 247 G ++++P Sbjct: 234 GLGISILPDL 243 >UniRef50_D2R7I4 Transcriptional regulator, LysR family n=6 Tax=Planctomycetaceae RepID=D2R7I4_9PLAN Length = 288 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 107/279 (38%), Gaps = 4/279 (1%) Query: 8 KMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL 67 ++R F+ +AQ N RAAE++ ++ +SI LEE++G +F RK ++ L AG L Sbjct: 5 QLRYFLKVAQRGNFTRAAEELMISQPALSRSIQKLEEELGQPVFERKTRSVLLTDAGTLL 64 Query: 68 YQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVE 127 + V L +EI + G+ R V I P + + L K+ E Sbjct: 65 QARSQQVLTILEDTKSEITDDGQCGRVRVGAIPTIAPYFLPEVLQRFSAKFPKANLIVQE 124 Query: 128 FSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQEL 187 + + +I + ++D I V A+ E+E L EL + E+ + + Sbjct: 125 NTTDVLIKSCRQGEIDLAILVLPVPAKYLEVEELFEEELLLVLPPHHA---LVEKDKIRV 181 Query: 188 LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIPHF 247 P+ + I + R P ++ R V H +++IP Sbjct: 182 ADVEPFPFVLLDEAHCLSDNIVSFCRQRSFQPVVVERTSQLTMVQELVSLAHGISLIPAM 241 Query: 248 AWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATML 286 A + Y R + + +R+ + +L Sbjct: 242 ARQCDQSQRRVYRSFTGR-KPTRTVAVAWNPYRFQSRLL 279 >UniRef50_UPI000178812A transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178812A Length = 312 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 115/295 (38%), Gaps = 18/295 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I +++ F+ + Q + RA+EK+ +T I A+E+++G LF R I++ Sbjct: 14 MEI---RQLEYFMAVCQELHFTRASEKLGVTQPTLSHQIKAIEDELGMPLFDRIGKKIAI 70 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGI-DNTYPTIIFDQLISLGDKY 118 +AG L + V+ ++ EI + + +G+ ++ L + Y Sbjct: 71 TEAGFILLKHCHTVFHSFKSVREEIQELQDIKRGRLSVGVLPGELNALVCRLLPDFHEAY 130 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + + S + V + L + ++D ++ V E + L +L +V+ Sbjct: 131 SEVQVRVI--SADNVAERLLNNEIDLALTIIPV-----HDERIVSQLLYKEKLYLVVNAD 183 Query: 179 YEERQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + E L++LP + F +D+ I+ + + I+ Sbjct: 184 HPLAEGPEVSLEALKDLPLV--LFPKNYRCRHQLDSICNLKEIDLRPAIEIDAIESMITL 241 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 +E G +++ + + +K + P Q L ++ +L+ Sbjct: 242 IEAGVGCSILSETLMKQWDKPGVKIVNIAENPFLRQVGLIYHKDKYRGQVVLKFT 296 >UniRef50_B9X9V4 Transcriptional regulator, LysR family n=1 Tax=bacterium Ellin514 RepID=B9X9V4_9BACT Length = 296 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 107/273 (39%), Gaps = 8/273 (2%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 +++ F+ +A+ + +RAA+++H++ P K I LE+++G LF R ++ +AG+ Sbjct: 4 RQIECFLAVAEELHFSRAAKRLHLSQPPLSKHIRQLEQELGVQLFIRNRRSVVQTEAGRI 63 Query: 67 LYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNT-YPTIIFDQLISLGDKYEGVTAQ 124 +K+ V +L + ++ E+ IG + + I L+ ++ V Sbjct: 64 YQEKVRNVLYQLEEAKLAAQRAQAGQTGELKIGFLSALFYDFIPPLLMRFRRRFPDVQVT 123 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 +E + + D ++D E+ + + + S +QE Sbjct: 124 LLEMVAAKQFEAVSDGKVDVAFPGLPPDKPGLEISSRILRK--DKWYACFHSEHPLAQQE 181 Query: 185 QELLQELPWLQMRFQNRANFEAMIDAN---MRPCGINPTIIYRPYSFMAKISAVERGHFL 241 + L+E+ F RA A+ DA R P + + +S + G + Sbjct: 182 KVWLEEVRRESFVFIQRAVSPALDDALLEMFRQVNYTPRVAQTASRAQSLLSLIAAGVGI 241 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLY 274 ++ P A + A L + + + + Sbjct: 242 SIFPG-AVSALPSAGLVFRPLKDKLAPYEHSII 273 >UniRef50_C6B9Q5 Transcriptional regulator, LysR family n=3 Tax=Rhizobium RepID=C6B9Q5_RHILS Length = 290 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 12/264 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD ++ + FI++A+ +++A AA+++++T + + I ALE ++G L R + Sbjct: 1 MD---TRFLETFIVVAERHSLAEAAQRLNLTPAAVAQRIRALEAELGVRLLVRSGRVMRP 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNT-YPTIIFDQLISLGDKYE 119 +AG + + + + + + + S E+ IG NT ++ D L L Y Sbjct: 58 TEAGFAILDRCRDLVRDTRDLKA-MAGTATISGEMRIGAINTALTGLVPDILHRLAQDYP 116 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 + + + + + LD + R + LT ++L L + R Sbjct: 117 LIEIFLKPGASMDLYAEVLNGTLDAAFI---IEPRFPMQKTLTFNKLRQEPLVLIAPRDC 173 Query: 180 EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 E ELLQ LP++ R+ + D +R GI P Y + A V+RG Sbjct: 174 EGADPLELLQTLPFI--RYDRNQWGGHIADEYLREIGIRPVERYELDALEAIAVMVDRGL 231 Query: 240 FLTVIPHFAWRLVNPATLKYFDAP 263 ++++P +A PA L P Sbjct: 232 GISIVPDWA--PPWPAGLDILKLP 253 >UniRef50_C8NRP5 Transcription regulator n=2 Tax=Corynebacterium efficiens RepID=C8NRP5_COREF Length = 309 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 101/247 (40%), Gaps = 5/247 (2%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + +++++ F+ +A N +RAA+ +H++ P + I LE+QIG LF R + L Sbjct: 1 MIEARQLKYFLAVASARNFSRAADDLHISQPPLSRQIRLLEKQIGTPLFERTSQGVELTA 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLI-SLGDKYEG 120 AG L ++ + L ++ ++ G+ S + +G T + QL+ + + Sbjct: 61 AGSFLAERAPAILNELEEVERDVRAIGQGSMGVLRLGFVGTATHQLMPQLLKQITIQLPE 120 Query: 121 VTAQPV-EFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V + E + LF RQLD + VS+ ELE+ + + Sbjct: 121 VEVRVSGEKLTPDLERLLFTRQLDAAVLRPPVSSPDIELESFGVDDFMLAVHPGHPLYDQ 180 Query: 180 EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 E L E P + F+ + E +I G + + ++ V G Sbjct: 181 EGTIPFTDLAEHPII--AFKEGSAAEQIIRHAAHQAGFELRVAHHAPETSTVLALVSAGL 238 Query: 240 FLTVIPH 246 + ++PH Sbjct: 239 GIALVPH 245 >UniRef50_Q984W9 Transcriptional regulator n=2 Tax=Mesorhizobium RepID=Q984W9_RHILO Length = 296 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 104/290 (35%), Gaps = 12/290 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 +F +++R FI +A+T N+ RAAE +H++ SP + I LEEQ+G LF R + LN Sbjct: 1 MFDLRQLRYFITVAETGNVGRAAEILHISQSPLSRQIMQLEEQLGVALFERARQRVHLNA 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTY--PTIIFDQLISLGDKYE 119 G+ + + ++ + + + IG ++ L + Sbjct: 61 EGRAFLTEARALIANARRVEEFGRSLASGAVGRLAIGYVEGAVHAGLVAGMLGQFRRERP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 + + ++ L R LD + A E+ ++ + P L + Sbjct: 121 QLHLSLMSLRSAAQLEGLHLRTLDLGLVYSPPPADYPEIASMLVRREP---LVLAIPEGD 177 Query: 180 EERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 ++ L PW+ + Q A G P I Y + + V Sbjct: 178 ALTAVADIGPHHLDGRPWVTVVRQPADTNRGQFLAACIEAGFVPDIAYETADPLTSLGLV 237 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATM 285 G L + + R P + + D P + YL + R A + Sbjct: 238 SAGLGLATV-QQSLRSAAPPGIVFRDLPWFKRSVAIYL-AWRRQDERAVI 285 >UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SW7_SYMTH Length = 305 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 107/288 (37%), Gaps = 16/288 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ + + F +A+T + RAAE++ +T I ALE+++G LF R+ + L Sbjct: 1 MDV---QGLEAFWWIAKTGSFNRAAERLFLTQPSVTARIQALEKELGQQLFERRPRGVRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIG-IDNTYPTIIFDQLISLGDKY 118 AG+ L V Q + + + S + +G T ++ D L+ Y Sbjct: 58 TDAGRALLPHAERVLQDIKRARQAVLDLQTASGGTLSVGSALTTSAYLLPDILLRFKRGY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + V + D + + + + E+ + +SE P L +V Sbjct: 118 PNVEVLVHTGRSHQVQQLVLDDTVQVGLVHAPLPS-HAEIVSYPLSEEPIL---LVVPPD 173 Query: 179 YEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + E+ L + ++ + + A+++ G P I S A Sbjct: 174 HPVARHSEVTLDELTQESFITT--DRASGYWALVEQWWASQGFVPHITMELDSIEAAKRM 231 Query: 235 VERGHFLTVIP-HFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRY 281 V G LT++P + + + + ++ + R + Sbjct: 232 VLCGLGLTMLPYSTVKSEIELSQVVAVPLANSATLKRQNILIHRRGKI 279 >UniRef50_C1PEC2 Transcriptional regulator, LysR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PEC2_BACCO Length = 304 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 103/255 (40%), Gaps = 12/255 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M +++ FI +A+ ++ AA+++H+ S + I+ LE ++G +LF R+ N+ L Sbjct: 1 MIRMELRQLIYFIEVAKREHVTHAADELHVAQSAISRQISLLEAELGVSLFWREGRNVRL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKY 118 G+ + V + +H + + +G F L++ +K+ Sbjct: 61 TPIGKVFLEHAEKVVLEIDKAKQRMHEFLDPDNGTVRLGFSTGLSVQTFSSLLAQFREKH 120 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 G+ Q V+ + + +I + + +L+ ++ S + ++ L +L L R Sbjct: 121 PGLEYQFVQGTPSYLIRLIENGELELALA----SPVPDDHPAVSGEILYMEKLMLLFRRD 176 Query: 179 YEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + ++ + L+ ++ R + ++ A R G P I + Sbjct: 177 HPLSGQKMIRLAQLKNERFITFR--EGFSIREILFAACRKSGFEPAIAFEGEDMETIKGL 234 Query: 235 VERGHFLTVIPHFAW 249 V G + ++P A Sbjct: 235 VASGTGVAILPEPAL 249 >UniRef50_Q13JN6 Transcriptional regulator, LysR family n=7 Tax=Burkholderiales RepID=Q13JN6_BURXL Length = 312 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 104/279 (37%), Gaps = 12/279 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + K +R F+ LA+T + RAA +++++ P + +AALE +G TL R +++L Sbjct: 25 VIDIKPLRYFVTLAETRHFGRAAARLNLSQPPLSRQLAALEASVGVTLVERSPRSVTLTA 84 Query: 63 AGQELYQKLFPVYQRLSAID-NEIHNSGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEG 120 AG+ Y + + N + + ++ IG + G + Sbjct: 85 AGERFYADAKAILTAVEQAVSNAQAAAQGEAGKLAIGFTMCAAYSVVPGYARVFGAAFPE 144 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E N + + + +D I +V + L + L +SR + Sbjct: 145 VALNLREVVSNDLAEQVLAGHIDAAIMFPNVPDK-----GLATRTIVSEPLCVALSRSHP 199 Query: 181 ERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + + L L P++ + A I + R G P I + +S V+ Sbjct: 200 RARARRLKIAQLAGEPFVLASGEVAPTLRATILEHCRSGGFEPDIRFEVQLQQTVLSLVD 259 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYS 275 G + ++P R A + + P+ Q +S Sbjct: 260 EGVGVALVPASM-RKAQLAGVVFRPLVDAPLIEQVLAWS 297 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P39592 Uncharacterized HTH-type transcriptional regulat... 296 5e-79 UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=C... 296 9e-79 UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Ge... 295 1e-78 UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax... 295 1e-78 UniRef50_Q3MEY8 Transcriptional regulator, LysR family n=1 Tax=A... 293 5e-78 UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=T... 291 2e-77 UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=R... 290 4e-77 UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=C... 290 4e-77 UniRef50_UPI0001694914 Transcriptional Regulator, LysR family pr... 289 5e-77 UniRef50_C3I9W8 HTH-type transcriptional regulator alsR n=1 Tax=... 289 1e-76 UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synecho... 288 2e-76 UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=A... 288 2e-76 UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=A... 286 5e-76 UniRef50_C3AN59 Transcriptional regulator, LysR n=4 Tax=Bacilli ... 285 1e-75 UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=... 284 2e-75 UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 283 5e-75 UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n... 283 5e-75 UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=S... 283 6e-75 UniRef50_C6D9U9 Transcriptional regulator, LysR family n=1 Tax=P... 283 7e-75 UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=... 282 8e-75 UniRef50_A7GMD6 Transcriptional regulator, LysR family n=3 Tax=B... 282 1e-74 UniRef50_P77559 Uncharacterized HTH-type transcriptional regulat... 282 1e-74 UniRef50_C6BXQ9 Transcriptional regulator, LysR family n=1 Tax=D... 281 2e-74 UniRef50_A8FAC2 Possible LysR family transcriptional regulator n... 281 2e-74 UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=B... 281 3e-74 UniRef50_Q7N4W1 Hca operon transcriptional activator n=2 Tax=Pho... 279 6e-74 UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellula... 279 7e-74 UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n... 279 7e-74 UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=R... 279 9e-74 UniRef50_Q1YDL8 Transcriptional regulator, LysR family n=1 Tax=A... 279 9e-74 UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=R... 279 9e-74 UniRef50_B9IRL1 HTH_1, Bacterial regulatory helix-turn-helix pro... 279 1e-73 UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=V... 279 1e-73 UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=M... 278 2e-73 UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=T... 276 5e-73 UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Az... 276 7e-73 UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citroba... 275 1e-72 UniRef50_B2SBJ3 ALS operon regulatory protein n=36 Tax=Proteobac... 274 2e-72 UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putativ... 272 8e-72 UniRef50_C2FRR6 LysR family transcriptional regulator n=2 Tax=Sp... 272 1e-71 UniRef50_B1J8H5 Transcriptional regulator, LysR family n=5 Tax=P... 271 2e-71 UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=... 271 2e-71 UniRef50_Q9RYH7 Transcriptional regulator, HTH_1 family n=2 Tax=... 271 2e-71 UniRef50_A6UMN5 Transcriptional regulator, LysR family n=1 Tax=S... 271 2e-71 UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=M... 271 2e-71 UniRef50_B2JUD8 Transcriptional regulator, LysR family n=12 Tax=... 271 3e-71 UniRef50_C1DL37 LysR family transcriptional regulator protein n=... 271 3e-71 UniRef50_Q1ATU8 Transcriptional regulator, LysR family n=1 Tax=R... 270 4e-71 UniRef50_Q13QG4 Transcriptional regulator, LysR family n=4 Tax=B... 270 4e-71 UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 ... 270 4e-71 UniRef50_A6LVD0 Transcriptional regulator, LysR family n=5 Tax=C... 270 5e-71 UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=P... 270 5e-71 UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=S... 270 5e-71 UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bo... 269 1e-70 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 269 1e-70 UniRef50_UPI00016C47B2 transcriptional regulator, LysR family pr... 269 1e-70 UniRef50_Q97GH3 Transcriptional regulator, LysR family n=2 Tax=C... 268 1e-70 UniRef50_B9JZE6 Transcriptional regulator LysR family n=1 Tax=Ag... 268 1e-70 UniRef50_C3BCJ4 Transcriptional regulator LysR n=1 Tax=Bacillus ... 268 2e-70 UniRef50_UPI0001745DD5 transcriptional regulator, LysR family pr... 267 3e-70 UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Ba... 267 3e-70 UniRef50_Q11BY5 Transcriptional regulator, LysR family n=1 Tax=C... 267 3e-70 UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter fo... 267 4e-70 UniRef50_A4W926 Transcriptional regulator, LysR family n=1 Tax=E... 267 4e-70 UniRef50_A5VFC0 Transcriptional regulator, LysR family n=2 Tax=P... 267 4e-70 UniRef50_Q8XFS3 Probable transcription regulator protein n=1 Tax... 266 5e-70 UniRef50_Q3JWC0 LysR family regulatory protein n=26 Tax=Burkhold... 266 5e-70 UniRef50_Q1DBN8 Transcriptional regulator, LysR family n=2 Tax=C... 266 6e-70 UniRef50_B1ZCQ9 Transcriptional regulator, LysR family n=3 Tax=R... 266 6e-70 UniRef50_Q12DG5 Transcriptional regulator, LysR family n=1 Tax=P... 266 7e-70 UniRef50_Q7W708 Putative LysR-family transcriptional regulator n... 266 7e-70 UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=A... 266 8e-70 UniRef50_A6VSP2 Transcriptional regulator, LysR family n=1 Tax=M... 265 1e-69 UniRef50_C6CDY7 Transcriptional regulator, LysR family n=10 Tax=... 265 1e-69 UniRef50_D2Q131 Transcriptional regulator, LysR family n=1 Tax=K... 265 1e-69 UniRef50_Q1IX51 Transcriptional regulator, LysR family n=3 Tax=D... 265 2e-69 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 264 2e-69 UniRef50_B8J696 Transcriptional regulator, LysR family n=3 Tax=A... 264 2e-69 UniRef50_C0Z7P7 Probable transcriptional regulator n=1 Tax=Brevi... 264 2e-69 UniRef50_O68014 HTH-type transcriptional regulator benM n=12 Tax... 264 2e-69 UniRef50_C6CYK3 Transcriptional regulator, LysR family n=3 Tax=B... 264 3e-69 UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=C... 264 3e-69 UniRef50_Q632J2 Transcriptional regulator, LysR family n=5 Tax=B... 263 5e-69 UniRef50_A1W235 Transcriptional regulator, LysR family n=6 Tax=B... 263 6e-69 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 262 7e-69 UniRef50_B4SNU6 Transcriptional regulator, LysR family n=1 Tax=S... 262 1e-68 UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax... 262 1e-68 UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax... 262 1e-68 UniRef50_A9HZJ0 Transcriptional regulator, LysR-family n=2 Tax=B... 262 1e-68 UniRef50_Q47141 Hca operon transcriptional activator n=46 Tax=Ga... 261 1e-68 UniRef50_A3VLP1 LysR family transcriptional regulatory protein n... 261 2e-68 UniRef50_C2FUK4 Transcriptional regulator n=2 Tax=Sphingobacteri... 261 2e-68 UniRef50_Q28M96 Transcriptional regulator, LysR family n=3 Tax=R... 261 2e-68 UniRef50_D2P368 Transcription activator of glutamate synthase op... 261 2e-68 UniRef50_B9X9V4 Transcriptional regulator, LysR family n=1 Tax=b... 261 3e-68 UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=C... 260 3e-68 UniRef50_B8IDW8 Transcriptional regulator, LysR family n=1 Tax=M... 260 4e-68 UniRef50_B2I0S1 Transcriptional regulator n=12 Tax=Acinetobacter... 260 5e-68 UniRef50_B0C1S6 Transcriptional regulator, LysR family n=2 Tax=C... 259 6e-68 UniRef50_B7H3Y5 HTH-type transcriptional regulator alsR (Als ope... 259 9e-68 UniRef50_C7JCS7 Transcriptional regulator LysR n=11 Tax=Proteoba... 259 9e-68 UniRef50_A0KPM6 Transcriptional regulator, LysR family n=2 Tax=G... 259 9e-68 UniRef50_B1K332 Transcriptional regulator, LysR family n=6 Tax=B... 259 1e-67 UniRef50_Q1IBR2 Putative transcriptional regulator, LysR family ... 259 1e-67 UniRef50_C4K9T0 Transcriptional regulator, LysR family n=1 Tax=T... 259 1e-67 UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=... 258 1e-67 UniRef50_Q5FRA7 Putative transcriptional regulator n=1 Tax=Gluco... 258 2e-67 UniRef50_A9BVL3 Transcriptional regulator, LysR family n=3 Tax=C... 258 2e-67 UniRef50_C4WNV4 Probable cat1 operon transcriptional activator n... 258 2e-67 UniRef50_UPI0001C42298 LysR family transcriptional regulator n=1... 257 2e-67 UniRef50_A7IQF8 Transcriptional regulator, LysR family n=12 Tax=... 257 2e-67 UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=... 257 3e-67 UniRef50_A1K6J7 LysR-family transcriptional regulator n=5 Tax=Pr... 257 3e-67 UniRef50_B2JSK1 Transcriptional regulator, LysR family n=1 Tax=B... 257 3e-67 UniRef50_C7JHS5 Transcriptional regulator LysR n=7 Tax=Acetobact... 257 3e-67 UniRef50_C6C1H7 Transcriptional regulator, LysR family n=1 Tax=D... 257 3e-67 UniRef50_Q46S95 Transcriptional regulator, LysR family n=2 Tax=B... 257 3e-67 UniRef50_A9I810 Transcriptional regulator, LysR-family n=5 Tax=P... 257 4e-67 UniRef50_A9C046 Transcriptional regulator, LysR family n=2 Tax=c... 257 4e-67 UniRef50_D1RNC3 Transcriptional regulatory protein n=1 Tax=Serra... 257 4e-67 UniRef50_Q13T34 Transcriptional regulator, LysR family n=60 Tax=... 257 4e-67 UniRef50_B5XSE9 Transcriptional regulator, LysR family n=6 Tax=E... 256 5e-67 UniRef50_C6Q0M3 Transcriptional regulator, LysR family n=1 Tax=C... 256 6e-67 UniRef50_Q1LM47 Transcriptional regulator, LysR family n=1 Tax=C... 256 6e-67 UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=B... 256 7e-67 UniRef50_B9J8D6 Transcriptional regulator protein n=69 Tax=Prote... 256 8e-67 UniRef50_C1BAS4 Putative LysR family transcriptional regulator n... 256 8e-67 UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=C... 256 9e-67 UniRef50_D2ATF2 LysR family transcriptional regulator n=2 Tax=Ac... 256 9e-67 UniRef50_Q7WNE4 LysR-family transcriptional regulator n=1 Tax=Bo... 256 9e-67 UniRef50_A0R5A9 Transcriptional regulatory protein n=16 Tax=Bact... 256 9e-67 UniRef50_B4T1W6 LysR family regulatory protein n=58 Tax=Enteroba... 256 1e-66 UniRef50_UPI0001C35EAB LysR family transcriptional regulator n=1... 255 1e-66 UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding... 255 1e-66 UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=... 254 2e-66 UniRef50_C9XXC7 HTH-type transcriptional regulator budR n=7 Tax=... 254 2e-66 UniRef50_B2TMS2 Transcriptional regulator, LysR family n=3 Tax=C... 254 3e-66 UniRef50_C5AIL5 Transcriptional regulator, LysR family protein n... 254 4e-66 UniRef50_D0IX94 Transcriptional regulator, LysR family n=2 Tax=C... 254 4e-66 UniRef50_A9HWS6 Transcriptional regulator, LysR-family n=1 Tax=B... 253 4e-66 UniRef50_A4JSC2 Transcriptional regulator, LysR family n=4 Tax=B... 253 4e-66 UniRef50_C8WE41 Transcriptional regulator, LysR family n=4 Tax=Z... 253 5e-66 UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=A... 253 5e-66 UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Ac... 253 5e-66 UniRef50_Q1LGR3 Transcriptional regulator, LysR family n=3 Tax=B... 253 6e-66 UniRef50_D2S9A0 Transcriptional regulator, LysR family n=1 Tax=G... 253 7e-66 UniRef50_C8X9S9 Transcriptional regulator, LysR family n=5 Tax=A... 252 7e-66 UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus ... 252 7e-66 UniRef50_B4SSK9 Transcriptional regulator, LysR family n=3 Tax=S... 252 8e-66 UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=... 252 1e-65 UniRef50_Q5WCI6 LysR family transcriptional activator of glutama... 252 1e-65 UniRef50_B0MH18 Putative uncharacterized protein n=4 Tax=Bacteri... 252 1e-65 UniRef50_A9BWC5 Transcriptional regulator, LysR family n=6 Tax=P... 252 1e-65 UniRef50_C3NNS3 LysR family regulatory protein CidR n=22 Tax=Vib... 251 2e-65 UniRef50_D0IZT6 Transcriptional regulator, LysR family n=5 Tax=C... 251 2e-65 UniRef50_Q03CT2 Fhu operon transcription regulator n=4 Tax=Lacto... 251 2e-65 UniRef50_B1K9P6 Transcriptional regulator, LysR family n=22 Tax=... 251 2e-65 UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Ta... 251 2e-65 UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus ... 251 2e-65 UniRef50_Q74DH4 Transcriptional regulator, LysR family n=1 Tax=G... 251 3e-65 UniRef50_Q20XL9 Transcriptional regulator, LysR family n=1 Tax=R... 250 4e-65 UniRef50_Q12BV9 Transcriptional regulator, LysR family n=5 Tax=c... 250 5e-65 UniRef50_P94403 HTH-type transcriptional regulator bsdA n=3 Tax=... 250 5e-65 UniRef50_C1DMS0 Transcriptional regulator, LysR family n=1 Tax=A... 250 6e-65 UniRef50_Q0K190 Transcriptional regulator, LysR-family n=1 Tax=R... 249 6e-65 UniRef50_C5CMN8 Transcriptional regulator, LysR family n=1 Tax=V... 249 7e-65 UniRef50_Q4KEU3 Transcriptional regulator, LysR family n=8 Tax=P... 249 8e-65 UniRef50_Q2T257 Transcriptional regulator, LysR family n=16 Tax=... 249 8e-65 UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 Re... 249 9e-65 UniRef50_C2C4F2 LysR family transcriptional regulator n=1 Tax=Li... 249 1e-64 UniRef50_Q48IW5 Transcriptional regulator, LysR family n=8 Tax=P... 249 1e-64 UniRef50_A9C1Z6 Transcriptional regulator, LysR family n=1 Tax=D... 249 1e-64 UniRef50_D1UNR7 Transcriptional regulator, LysR family n=1 Tax=B... 248 1e-64 UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=F... 248 1e-64 UniRef50_C6DI39 Transcriptional regulator, LysR family n=1 Tax=P... 248 2e-64 UniRef50_Q2RZH0 Transcriptional regulator, LysR family n=1 Tax=S... 248 2e-64 UniRef50_C0CQ02 Putative uncharacterized protein n=1 Tax=Blautia... 248 2e-64 UniRef50_B6B1G4 LysR family transcriptional regulatory protein n... 248 2e-64 UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Provide... 248 2e-64 UniRef50_B0V4K3 HTH-type transcriptional regulator n=13 Tax=Acin... 248 2e-64 UniRef50_A3UQR4 Transcriptional regulator, LysR family n=1 Tax=V... 248 2e-64 UniRef50_A1S338 Transcriptional regulator, LysR family n=16 Tax=... 248 2e-64 UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus ... 247 2e-64 UniRef50_A1K5Q5 Transcriptional regulator, LysR family n=4 Tax=B... 247 2e-64 UniRef50_C6B5D0 Transcriptional regulator, LysR family n=1 Tax=R... 247 2e-64 UniRef50_B8DQG2 Transcriptional regulator, LysR family n=6 Tax=B... 247 3e-64 UniRef50_B8CTJ9 Regulatory protein, LysR:LysR, substrate-binding... 247 3e-64 UniRef50_A9F0H5 Transcriptional regulator, LysR family n=1 Tax=S... 247 3e-64 UniRef50_A5FXN6 Transcriptional regulator, LysR family n=6 Tax=A... 247 4e-64 UniRef50_UPI0001744D79 transcriptional regulator, LysR family pr... 247 4e-64 UniRef50_B1M8F7 Transcriptional regulator, LysR family n=4 Tax=R... 247 5e-64 UniRef50_C1PEC2 Transcriptional regulator, LysR family n=1 Tax=B... 246 5e-64 UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=V... 246 7e-64 UniRef50_B1FZF1 Transcriptional regulator, LysR family n=1 Tax=B... 246 7e-64 UniRef50_Q13JN6 Transcriptional regulator, LysR family n=7 Tax=B... 246 8e-64 UniRef50_O33945 Probable cat1 operon transcriptional activator n... 246 9e-64 UniRef50_A0B0U5 Transcriptional regulator, LysR family n=18 Tax=... 246 1e-63 UniRef50_Q213Z8 Transcriptional regulator, LysR family n=2 Tax=R... 245 1e-63 UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=... 245 1e-63 UniRef50_A4EJ78 Transcriptional Regulator, LysR family protein n... 245 1e-63 UniRef50_B7WRI3 Transcriptional regulator, LysR family n=1 Tax=C... 245 2e-63 UniRef50_P20667 HTH-type transcriptional regulator catR n=15 Tax... 245 2e-63 UniRef50_P37499 Uncharacterized HTH-type transcriptional regulat... 245 2e-63 UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepI... 245 2e-63 UniRef50_Q6FDZ3 Putative transcriptional regulator n=1 Tax=Acine... 244 2e-63 UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Ve... 244 2e-63 UniRef50_Q0RXH6 Transcriptional regulator, LysR family protein n... 244 3e-63 UniRef50_A6TWD6 Transcriptional regulator, LysR family n=1 Tax=A... 244 3e-63 UniRef50_A1SFE6 Transcriptional regulator, LysR family n=3 Tax=A... 244 4e-63 UniRef50_Q39JP1 Transcriptional regulator, LysR family n=11 Tax=... 244 4e-63 UniRef50_Q0S8J9 Transcriptional regulator, LysR family protein n... 243 5e-63 UniRef50_A8I2H0 Regulatory protein n=2 Tax=Rhizobiales RepID=A8I... 243 6e-63 UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi... 243 6e-63 UniRef50_C6PMR8 Transcriptional regulator, LysR family n=1 Tax=C... 242 7e-63 UniRef50_A1SEX2 LysR, substrate-binding n=11 Tax=Actinomycetales... 242 8e-63 UniRef50_C6PVA1 Transcriptional regulator, LysR family n=1 Tax=C... 242 9e-63 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 242 1e-62 UniRef50_P52670 HTH-type transcriptional regulator ilvR n=98 Tax... 242 1e-62 UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n... 242 2e-62 UniRef50_B4ETB5 LysR-family transcriptional regulator n=7 Tax=En... 242 2e-62 UniRef50_C6XSY8 LysR substrate-binding n=12 Tax=Bacteroidetes Re... 241 2e-62 UniRef50_Q7WNK0 LysR-family transcriptional regulator n=1 Tax=Bo... 241 2e-62 UniRef50_Q12BP5 Transcriptional regulator, LysR family n=1 Tax=P... 241 2e-62 UniRef50_Q390Q2 Transcriptional regulator, LysR family n=6 Tax=B... 241 2e-62 UniRef50_B1HQK1 HTH-type transcriptional regulator n=3 Tax=Bacil... 241 2e-62 UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=H... 241 2e-62 UniRef50_D0J1D7 Transcriptional regulator, LysR family n=12 Tax=... 241 3e-62 UniRef50_C3NQ92 Transcriptional regulator of alpha-acetolactate ... 241 3e-62 UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=... 241 3e-62 UniRef50_C6D0V7 Transcriptional regulator, LysR family n=4 Tax=B... 240 4e-62 UniRef50_C6J497 Transcriptional regulator n=1 Tax=Paenibacillus ... 240 4e-62 UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=E... 240 4e-62 UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=P... 240 5e-62 UniRef50_UPI0001874129 transcriptional regulator, LysR-family n=... 239 6e-62 UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=O... 239 7e-62 UniRef50_Q049X7 Fhu operon transcription regulator n=13 Tax=Lact... 239 7e-62 UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding... 239 8e-62 UniRef50_Q7W5S7 LysR-family transcriptional regulator n=3 Tax=Bo... 239 1e-61 UniRef50_B2JTF3 Transcriptional regulator, LysR family n=1 Tax=B... 239 1e-61 UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Ge... 238 2e-61 UniRef50_P52666 HTH-type transcriptional regulator budR n=7 Tax=... 238 2e-61 UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 238 2e-61 UniRef50_Q03TG2 Fhu operon transcription regulator n=1 Tax=Lacto... 238 2e-61 UniRef50_Q67MJ1 LysR family transcriptional regulator n=1 Tax=Sy... 237 2e-61 UniRef50_UPI0001B565BC LysR family transcriptional regulator n=1... 237 2e-61 UniRef50_B8K739 Transcriptional regulator, substrate-binding of ... 237 3e-61 Sequences not found previously or not previously below threshold: UniRef50_B6AZI7 Transcriptional regulator, LysR family n=1 Tax=R... 246 9e-64 UniRef50_C6XZC9 LysR substrate-binding n=1 Tax=Pedobacter hepari... 244 3e-63 UniRef50_C6XNZ9 Transcriptional regulator, LysR family n=1 Tax=H... 242 2e-62 UniRef50_Q8NT56 Transcriptional regulator n=3 Tax=Corynebacteriu... 240 4e-62 >UniRef50_P39592 Uncharacterized HTH-type transcriptional regulator ywbI n=9 Tax=Bacillales RepID=YWBI_BACSU Length = 301 Score = 296 bits (760), Expect = 5e-79, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 111/295 (37%), Gaps = 13/295 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + + F+ +A+ + +A++ ++++ K I LEE++G LF R + L Sbjct: 1 MDI---RHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLEEELGIELFYRNGRQVEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQ-LISLGDKY 118 AG +Y + + + + +E+++ + + IG+ + F + L + Y Sbjct: 58 TDAGHSMYVQAQEIIKSFQNLTSELNDIMEVKKGHVRIGLPPMIGSGFFPRVLGDFRENY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 VT Q VE V + + D LD + + + + L L S R Sbjct: 118 PNVTFQLVEDGSIKVQEGVGDGSLDIGVVVLPANEDIFHSFTIVKETL---MLVVHPSHR 174 Query: 179 YEERQE--QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + +E L++ P++ R I G P IIY + V Sbjct: 175 LADEKECQLRELKDEPFIFFR--EDFVLHNRIMTECIKAGFRPHIIYETSQWDFISEMVS 232 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 + ++P R ++P +K P+ R RY + + E Sbjct: 233 ANLGIGLLPERICRGLDPEKVKVIPLVD-PVIPWHLAIIWRKDRYLSFAARAWLE 286 >UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=Cyanobacteria RepID=Q3M2K4_ANAVT Length = 298 Score = 296 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 106/293 (36%), Gaps = 6/293 (2%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTR-KDNNISLNK 62 + +R FI +A+ + ++AAE++H+ P + I LE ++G LF R + L + Sbjct: 1 MELRHLRYFIAVAEELHFSKAAERLHIAQPPLSQQIQQLEAELGVELFQRKTKRQVQLTE 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFD-QLISLGDKYEG 120 AGQ Q+ + ++ +LS + +GR ++ +G + + L +++ Sbjct: 61 AGQVFLQEAYQLFAQLSKAIDLTQRTGRGEKGQLRVGFTSLVTYDLLPVILRQFREQFLE 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E + LFDR++ + + E + L L R + Sbjct: 121 VELVLQELTTTQQEQALFDRRIHVGFAHPPLEDNTFNQECIHQEGLIVAMLVTHFLAR-Q 179 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 E L++ ++ I + + +P + I V G Sbjct: 180 ENISVRELKDENFIMFPRYLGPGLYDQILSLCQQGNFSPKVTIEAIQMQTIIGLVSGGMG 239 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 + ++P + A + Y + + E R T + + + R Sbjct: 240 IAIVPSSLQN-LQRAGVVYRTLDEKT-PLVETAVVWRQEDMTPVLREFLQIVR 290 >UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Geobacillus RepID=A4ISN4_GEOTN Length = 305 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 107/291 (36%), Gaps = 9/291 (3%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + K+++ F+ +A+ I +AA+K+H+ P + + LEE++G LF RK + L Sbjct: 1 MIDVKQLKYFVTIAEEGQITKAAQKLHIAQPPLSQQLKQLEEKLGVPLFDRKAKKMELTA 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLISLGDKYEGV 121 G+ Y+K + +L E+ + + +G + + + + +++ V Sbjct: 61 PGKLFYEKAKQLLHQLDDAIAEVKEIETGATGTLAVGCVKSCFSYLAQTIRQFHEQFPNV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 T E + L +R +D I + + + I LP R ++ + Sbjct: 121 TFHLREGDTFSICQLLQERHIDIGIVRLPIDSSHYD-----IIPLPSDRYVAVLPEHWAL 175 Query: 182 RQ---EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + E P L + + A + R G P ++ +S V +G Sbjct: 176 SRSSLSMRDFAEWPLLLLHRVHGAGQYERVVEECRRHGFEPNVLCECPDATILLSLVAQG 235 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 T++P L ++ M + + R ++ + Sbjct: 236 MGATIVPQSTVSLFRLPGIRVLPIVDSSMKAEAAVIIDRQRYVPKSVHHFL 286 >UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax=Bacillus RepID=ALSR_BACSU Length = 302 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 97/292 (33%), Gaps = 13/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + ++ FI +A+ + +AA +++MT P + I LEE++G TL R + L A Sbjct: 1 MELRHLQYFIAVAEELHFGKAARRLNMTQPPLSQQIKQLEEEVGVTLLKRTKRFVELTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPT-IIFDQLISLGDKYEGV 121 G+ ++ + R +VIG + + + K+ V Sbjct: 61 GEIFLNHCRMALMQIGQGIELAQRTARGEQGLLVIGFVGSATYEFLPPIVREYRKKFPSV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E S + + L +D I + L I + +++ Sbjct: 121 KIELREISSSRQQEELLKGNIDIGILHPPLQHTA-----LHIETAQSSPCVLALPKQHPL 175 Query: 182 ----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 E L++ P + + + G P I+ + I V Sbjct: 176 TSKESITIEDLRDEPIITVAKEAWPTLYMDFIQFCEQAGFRPNIVQEATEYQMVIGLVSA 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G +T +P A +L N + E++ + R + + I Sbjct: 236 GIGMTFVPSSAKKLFNLDVTYRK--MDQIQLNAEWVIAYRKDNHNPLIKHFI 285 >UniRef50_Q3MEY8 Transcriptional regulator, LysR family n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3MEY8_ANAVT Length = 295 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 101/292 (34%), Gaps = 13/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ LA+ + +AAE++H+ P + I LE ++G+ LF R + L +A Sbjct: 1 MELRHLRYFVTLAEELHFGKAAERLHIAQPPLSQQIRQLEIELGFDLFHRTKRTVRLTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 GQ ++ + Q+L S R ++++G ++ I ++ V Sbjct: 61 GQVFLGEVQQILQQLQQAIQLGQTSSRGEVGQLIVGFVSSAAYNILPIILRNFRACTPAV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + + ++ L + +D V + + L + + Sbjct: 121 KLELHEMTTDQQLEWLREGGIDIGFIRPPVEENI-----FNWETIFQESLMVALPETHLL 175 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L ++ + +I + + G +P + +S V Sbjct: 176 ANQFNIPLTSLGNESFILFPRKIAPGLYDLIISLCQQAGFSPHVAQEAIQMQTTVSLVAA 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + ++P L + Y + + R + + T+ + + Sbjct: 236 DMGIAIVPASLQNLQRT-GVVYKNIQEATA-KVALAMTWRKNETSPTLQRFL 285 >UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3E5_THIIN Length = 301 Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 110/303 (36%), Gaps = 15/303 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ +A+ + +RAAE++H++ P I ALE++IG L R + ++L A Sbjct: 1 MELRQLRYFVTIAEQGSFSRAAERLHISQPPLSTQIKALEDEIGARLLERSNRGVTLTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP-TIIFDQLISLGDKYEGV 121 G ++ + V +L + + R + + IG + I+ L S +Y V Sbjct: 61 GAAFFEDIRSVLAQLEHAVERVRQAERGDAGTLSIGFVSIADFGILPPTLKSFRARYPQV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE- 180 Q E + + I L +LD I V LT + L L + Sbjct: 121 DVQLHELTTDAQIRELRAAELDLSIGLAPVDEP-----GLTFTPLLQEPLMLAAPTTHPV 175 Query: 181 -----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + L + P++ + + + G P I I V Sbjct: 176 LQEGSGAVDLRALAKEPFIVPPRNIGPGLYDLTLSLCQAAGFAPRITQHARQMQTVIGLV 235 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDG 295 G + ++P +L P ++Y +P ++ + + + R+ Sbjct: 236 SCGMGVALVPASLRQLKRP-GVQYRPLLGQPATIELGILQL-SQTSNPLRDNFNQALREA 293 Query: 296 TSH 298 H Sbjct: 294 ALH 296 >UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MA3_RALEJ Length = 296 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 103/296 (34%), Gaps = 14/296 (4%) Query: 1 MDI-FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNIS 59 MDI + +R FI +A+ N RAAE++H+ P I LEE++ TL R ++ Sbjct: 1 MDIVMDLRHLRYFIAIAEELNFTRAAERLHIAQPPLSMQIRQLEEEMDVTLLNRTRRHVE 60 Query: 60 LNKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGID-NTYPTIIFDQLISLGDK 117 L +AG+ ++ + + + + R + + +G +T T++ L + ++ Sbjct: 61 LTEAGRIFLEQARQILRATERAVVQAQRAHRGETGRLTVGFFEHTSYTLLPPILRAYRER 120 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 + V F + L D V +LE +T + V Sbjct: 121 FPSVEILLRWFPVVKQAEALRRGDADISFMR-----PVPDLEEVTWETILEEPFVLAVPA 175 Query: 178 RYEER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 R+ + + P++ + +F AM G P +I + Sbjct: 176 RHPLANAESISLKKCAQEPFVMYIPEMAPDFHAMNMRMCASAGFVPKVISEVGQVYTLLG 235 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V G + +P R V + Y R E + T M I Sbjct: 236 LVSSGAGIGFVPASV-RKVKFDHVVYKPIEGR-QPTIEIMLGYSQRTPTPLMTAFI 289 >UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHL3_ACIBL Length = 306 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 110/305 (36%), Gaps = 14/305 (4%) Query: 1 MD-IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNIS 59 MD + +R F+ +A+ + RAA ++H+ P + I LEE +GY LFTR + Sbjct: 1 MDNEIELRHLRYFVAVAEELHFGRAAARLHLAQPPLSQQIKKLEEILGYALFTRTSRAVK 60 Query: 60 LNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLI-SLGDK 117 L AG+ ++ + + E+ + GR + +G + + + Sbjct: 61 LTSAGEVFLERAQRTLRHVREDMEEVRSIGRGEVGYLRVGFIGSSMLTVLPAIFGRYRRA 120 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 Y V Q E +GV++ L LD I LT+ L ++ Sbjct: 121 YPKVNLQLQESYTSGVVEGLLKATLDAGILR-----DGGPTHGLTVERLYSEPFVAVLPG 175 Query: 178 RYEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 ++ +++ L L++ P++ + + G P ++ ++ + Sbjct: 176 KHPLAKQRALSPRALKDEPFVFYPPYSSKLAYEKPVSICEAHGFRPKVVQEAPQWLTILR 235 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 V G +++ P R+ P + + + R + R Sbjct: 236 LVGAGLGVSIAPACVERIAAPD-VVCIPLRGA-AVRSDIELAFREGEGREIVRAFAEIVR 293 Query: 294 DGTSH 298 DG +H Sbjct: 294 DGFAH 298 >UniRef50_UPI0001694914 Transcriptional Regulator, LysR family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694914 Length = 299 Score = 289 bits (742), Expect = 5e-77, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 102/291 (35%), Gaps = 12/291 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ N RAA ++++T P + I LE+++G+ L R + L +A Sbjct: 1 MELRHLRYFVTVAEELNFGRAAARLNITQPPLSQQIRQLEQELGFPLLFRTKQRVELTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYEGVT 122 G+ ++ + + + + + I + I L S ++ V+ Sbjct: 61 GKVFLEEARITLAHIDKTLDSARRAHLGAAGRLDIAFVGSATYRIVPLLQSYRMRFPSVS 120 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 + + L + Q+ I V + + L + + R + + Sbjct: 121 LVLHQMKTANQLQALHESQIHLGIIRSPVQSPL-----LASTVIYRERFLVALPHTHPLT 175 Query: 183 Q----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + + L+ ++ N + + + G P I + ++ V G Sbjct: 176 RENQLRIQDLEHQDFILPSRSNGSMYHEAVIRLCFQSGFYPKIALEAPEILTIVAFVSAG 235 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + ++P + Y + + M + + R + + + Q + Sbjct: 236 MGIALVPASFQNQ-QNIGVVYRELENVG-TMLDMVMVWRKNEKSQVLKQFL 284 >UniRef50_C3I9W8 HTH-type transcriptional regulator alsR n=1 Tax=Bacillus thuringiensis IBL 200 RepID=C3I9W8_BACTU Length = 292 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 107/291 (36%), Gaps = 15/291 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ LA+ N +RAAEK+H+ P K I LEE+IG LF R ++ L A Sbjct: 1 MELRHIRYFLALAEELNFSRAAEKLHIAQPPLSKQIKDLEEEIGAKLFNRTKRHVELTNA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLISLGDKYEGVT 122 GQ K + + ++ + + E+VIG + + + ++Y V Sbjct: 61 GQVFLDKSYQILDQVEQACISTRLTSTGTEGELVIGFSGSVQD-LIPTIQRYRERYPKVG 119 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 + S + NL ++++D I +++ + + + + L ++ ++ Sbjct: 120 IVLQQLSTTIQVKNLIEKKIDIGILAAPINSS-----KIHVRPVKKVCLRAIIPEKHPLA 174 Query: 183 QE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + L+ P++ + + G P I + + V G Sbjct: 175 IKQSIYIHDLENEPFIMATKSAAPFYYETFMNLFQSVGFAPKITVQANDLQTVSALVANG 234 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + ++P L K D E + R + + + + Sbjct: 235 MGVALLPSSINPLSGLIHRKVEDIN----TEIEASLAWRKDNKSELLEKFL 281 >UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMZ4_9SYNE Length = 289 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 98/292 (33%), Gaps = 13/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ +A + +AA++++M P I LE + LF R +SL A Sbjct: 1 MNLRQLNYFLAVANELHFGQAAKRLNMAQPPLSMQIKQLESDLDVQLFERTQRKVSLTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNT-YPTIIFDQLISLGDKYEGV 121 G+ L ++ + +R+ + + R + ++ I ++ +I+ + + Y V Sbjct: 61 GEVLKKEAEQILERIEVARRKTQQADRGETGQMAIAFVSSAMYSILPPWISAFRQSYPQV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + I L Q+D + + + L + + Sbjct: 121 ALTFQEATGLEQISGLLSHQIDIGFVRPPIEDVSISDKVV-----WREPLVVALPEGHRL 175 Query: 182 ----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L++ P++ ++ + I + + +P I + V Sbjct: 176 STHKAISISSLEQEPFILIQRPLASEMYDKIISFCQQASFSPNITQTAQQLQTILGLVAA 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + ++P A + + A + Y E + R + + Sbjct: 236 NLGIAILP-TAAQKLQRAGICYRPFIE-TTPAVELVMIWRKDETSRLRENFL 285 >UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=Actinobacteria (class) RepID=A4F7Y9_SACEN Length = 333 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 40/293 (13%), Positives = 97/293 (33%), Gaps = 14/293 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ ++ RAA ++H+ P + LE ++G L R L A Sbjct: 1 MELRHLRYFVAIAEEQSLTRAAARLHIAQPPLSAQLRKLETELGAVLVHRTARGTQLTDA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPT-IIFDQLISLGDKYEGV 121 G+ L ++ + + +G + +G + ++ L +Y V Sbjct: 61 GRVLLEEARRILHEVDHAAQMTREAGSGRVGRLSLGFIPSASNVVLPPILRQFKARYPEV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + +++ L DR++D + +L + + L + + Sbjct: 121 RLRLREMRPDEIVERLHDRRIDAGFFYLPIDDP-----SLHVRSVADDSLVLALPSTHPL 175 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIY-RPYSFMAKISAVE 236 E+ + P++ + + G P ++ + + V Sbjct: 176 ADSPEVDLRAVAGEPFILPPRYDMPGLYTSVTQACERAGFTPRVVQPDVWLMQTIVGLVA 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + V+P ++ A + + + R T + + Sbjct: 236 GGMGIAVVPSSVQQIPR-AGATFVPLTDVSATAR-MAMAWRREIGTPVLRSFL 286 >UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WUA0_ALIAD Length = 298 Score = 286 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 105/296 (35%), Gaps = 14/296 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD +++ F+ +A+ + RAA+++ +T P + I LE++IG TLF R + + L Sbjct: 1 MD-TELRQLEYFVAVAEELHFGRAAKRLGLTQPPLSQQIQKLEDEIGVTLFDRTNRRVQL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPT-IIFDQLISLGDKY 118 AG+ L ++ V + ++ + + + + + + + +++ Sbjct: 60 THAGRVLLEEARKVLAHVQTAVKAARDAAAGRVGRLSVAFVGSATYGWLPEVIRAYQERH 119 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V E S ++ L +LD + +L + + +V Sbjct: 120 PDVELVLREMSTPAQMEALTAGELDVGVLRLPAQHP-----DLHVRLVERDDCVAVVPSE 174 Query: 179 YEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + L L E P++ + R G P + + Sbjct: 175 HPLATRSSLFLVELAEEPFVLVSRAIWPGLYDGFITLARALGFEPRVRLEVTEVQTAVGL 234 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 V G ++++P A V+ ++Y + E + R + + +A Sbjct: 235 VAAGLGVSIVP-SATERVHRRDVRYLHIDGQS-PTVELGVAWRRRDTSPLVAAFLA 288 >UniRef50_C3AN59 Transcriptional regulator, LysR n=4 Tax=Bacilli RepID=C3AN59_BACMY Length = 314 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 117/295 (39%), Gaps = 14/295 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R FI++A+ + RAA ++HM P + ++ LE+++ +LF R N+ L Sbjct: 25 MDI---RQLRYFIVIAEERQLTRAAHRLHMAQPPLSRQLSLLEQELSVSLFERNGRNMHL 81 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 + G+ LY+K + Q+L EI ++G + IG ++ + +++ + Y Sbjct: 82 TEEGKILYRKAKSIIQQLEETITEIKDTGEGLRGNLSIGAFHSCIPFLSEKIRYFQENYP 141 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVS--- 176 V + E +I+ L +R ++ + + + ++ ++ Sbjct: 142 NVNLKVWEGGPLYLIEQLENRNIELAVLRTPFNKKAFSSICVS-----KEPFVLVMPAKW 196 Query: 177 --RRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 L +P L + ++ ++ GI I + Sbjct: 197 ELHHSNLPISITKLDHIPLLLLHKDKEDSYHQLVIDECSRHGIKLNIACECPDSAFVLML 256 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + G +++P A + ++ D P + + +++ + + + + I Sbjct: 257 IMAGIGASILPKSAVSYIPQEFIRIVDLIDFPFQSESSIIWLKDRKLSNSARRFI 311 >UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945AE Length = 303 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 102/293 (34%), Gaps = 14/293 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + ++ FI + + + +AA+ +H+T K I +E+++G L R + L A Sbjct: 7 LDIRHLKYFIEVVRCKSFTKAADVLHITQPTISKMIKNIEDELGVVLLDRSTKQVMLTDA 66 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 GQ + + + + + E+ N + +I +G+ + F +I KY + Sbjct: 67 GQSILLQAQQIVKSFENLSIELANTIHLKKGKIRMGLPPMVGSRFFPHIIGEFHHKYPNI 126 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 Q +E V + + + LD + + + +L +V ++ Sbjct: 127 EIQLIEEGAKKVEEQVEEGHLDIGVVLLPIPSG-----TFDSFPFVHEKLMVVVYPKHRL 181 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + L+ P++ R I G P ++Y + V Sbjct: 182 AGQTVIALKKLEHEPFILFR--EGFVLHDRIPEECIRAGFQPKVVYESSQWDFISEMVAA 239 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 G ++++P R +NP + P +Y + ++ Sbjct: 240 GLGISMLPESICRELNPNRVITIPLVE-PSIDWSLAMIWPKEQYISYAVREWI 291 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 113/298 (37%), Gaps = 9/298 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ +++ + RAAEK++++ + I ALE ++G LF R ISL +A Sbjct: 9 IELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISLTEA 68 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIG-IDNTYPTIIFDQLISLGDKYEGV 121 G+ L ++ + + I + G + IG + ++ ++ +Y + Sbjct: 69 GRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAILDFNKQYPNI 128 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + + L +LD I+ V + L SEL L S E Sbjct: 129 ELSVLGLRTGEIREKLLQNELDIGITFLPVQDKEIVSIPLYKSELT---LVVPTSHSLTE 185 Query: 182 RQ--EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 R+ E LQ+ P + + +I ++ + P I + + I V +G Sbjct: 186 RKYVSIEELQDYPLILLP--KNFYLTELITSHCQNFNFKPKPILEISTMESLIQMVAQGM 243 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 +TV+P + ++ + + L R+ A + I + + Sbjct: 244 GITVLPKPYIDFLQNEHIQAIKIENPTPTIDIGLIYRRDKYMCAATRKFIEQLKITVH 301 >UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W9G9_BORPA Length = 296 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 97/302 (32%), Gaps = 14/302 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ + RAA ++ + P I LE +IG L R+ ++L +A Sbjct: 1 MELRHLRYFVAVAEDLHFTRAAARLGIGQPPLSLQIQQLEREIGTPLLLRQPRGVALTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTY--PTIIFDQLISLGDKYEG 120 G Q V G +I +G + + + + D+Y G Sbjct: 61 GARFLQDARAVLHAAELAVETARRLGHGEQGDIAVGFTASAVFHPYLPSAIRAYRDRYPG 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E + ++ L ++D + + + + + + Sbjct: 121 VRIALSESNARALLAGLRSGEVDVAFVRPPYALDDE----FASERVLDEPMLVALPPDHP 176 Query: 181 E----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 L E ++ A I + G P +I + IS V Sbjct: 177 LCRKRTVPVAALAEQDFVLYPRPIGAGLYDAIMQACQRAGFTPRVIQEAPQMASIISLVA 236 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGT 296 G + V+P A R + A + Y + R +A + + E G Sbjct: 237 AGVGIAVVPA-AMRHMGAAGIVYRPIRG-DAPRALLDMAYRRQPRSAAVRHAV-ELLRGR 293 Query: 297 SH 298 +H Sbjct: 294 AH 295 >UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F7Y4_SORC5 Length = 327 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 107/292 (36%), Gaps = 7/292 (2%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F +A+ + RAA+++ + P + I LE ++G++LF R + L A Sbjct: 1 MDLRHLRYFTAVAEERHFGRAAQRLGIAQPPLSRQIQDLESELGFSLFDRSRRRVELTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G L + V+ L +E + + +V+G ++ +L+ + V Sbjct: 61 GAVLLAHVRRVFDALELAVHEARRASVGETGRLVVGYLSSLAYSGITELVRTFRGELPAV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E I+ L D ++D + E + L + L + Sbjct: 121 ELALREMPPQEQIEALKDGRIDVGFVRAPLHDARLASECVRREPLL-VALPADHPLAARK 179 Query: 182 RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 R ELL P++ Q + F ++ R G +P I +S V G + Sbjct: 180 RIPLELLSREPFVVFPRQRGSAFFDLVMGLCRAAGFSPRIAQEALHLD-ILSLVAAGFGV 238 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 +++P V L P + L + R + T+ Q ++ R Sbjct: 239 SILPESIKN-VGRKGLALRPIVGAPST--DLLVAWRADDASPTLRQFLSFVR 287 >UniRef50_C6D9U9 Transcriptional regulator, LysR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6D9U9_PECCP Length = 294 Score = 283 bits (724), Expect = 7e-75, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 107/297 (36%), Gaps = 12/297 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R FI +A+ + RAA ++++ P + I +LE ++G LF R ++ L +A Sbjct: 1 MEFRHIRYFIAVAEELHFTRAAVRLNIGQPPLSQQIQSLEAELGVLLFERTRRSVRLTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNT--YPTIIFDQLISLGDKYEG 120 GQ + + + + +E+ R + E+ I +T + L + KY Sbjct: 61 GQHFLIRAREILESSEGVASELQRISRGEAGELKISFTSTGLLVEELRTPLRTFRAKYPE 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E + L +LD + + LT+ + RL ++ + Sbjct: 121 VRLTLKEMFTHLQFAALLAGELDIGCVR---FNGPRAPDGLTLRWIRNDRLCLVLPDDHP 177 Query: 181 ERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 +++ P++ + A+ + G P + M +I V Sbjct: 178 LAGRTDVGIVEVRDEPFIGYPAKAGASVSDYVTMCCEQAGFIPNVTQEAREAMTQIGLVA 237 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 G + ++P + P + + ++ L + R + + + R Sbjct: 238 AGMGVAILPQPM-DQLQPKGVCFIPLSDAGAQLRMALVT-RESDNSPRVRNFVDLVR 292 >UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=Edwardsiella RepID=C5BDD2_EDWI9 Length = 330 Score = 282 bits (723), Expect = 8e-75, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 117/295 (39%), Gaps = 14/295 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + ++ FI +A+ + RAAE+++++ P + I +LE ++G L R + ++SL +A Sbjct: 20 IEIRHLKYFIAVAEERHFNRAAERLNISQPPLSQQIQSLERELGACLLMRTNRSVSLTQA 79 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP--TIIFDQLISLGDKYEG 120 G ++ + + +L + + R + ++ IG ++ P + L S +Y Sbjct: 80 GSLFLKECYSIVGQLEQAAEKAARAHRGETGDLTIGFTSSVPFIPRVAHSLFSYRHRYPQ 139 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V Q E + I+ L D +LD I + V L L L ++ R + Sbjct: 140 VHLQMRELNTKQQIEPLVDGKLDIGILRNTLLPGV-----LKHRVLQREPLVAVLHRHHP 194 Query: 181 ERQ-----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 Q L + P++ + + + ++ GI P I M + + Sbjct: 195 LAQRGQALRFSDLADQPFVFFSRGDGTALYDELLSLLKRAGIVPYITQEVGEAMTIVGLI 254 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 G ++++P R + + Y Y + +L R +A IA Sbjct: 255 SAGLGVSILPASYTR-IQVDGVCYRALDEPDAYTEVWLAYHRQRPLSAQATALIA 308 >UniRef50_A7GMD6 Transcriptional regulator, LysR family n=3 Tax=Bacillaceae RepID=A7GMD6_BACCN Length = 294 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 116/293 (39%), Gaps = 12/293 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R F +AQ I RAA+++HM P + + LE+++G L R + L Sbjct: 1 MDI---RQLRYFYTIAQEGQITRAAKRLHMAQPPLSQQLKLLEQELGVQLLERNGRKLEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG L++K + E+ G + IG + + I D+L S + Y Sbjct: 58 TEAGHVLFKKTKEILTHFHETITEVKEVGSGLKGTLSIGSVKSAFSYIPDRLRSFHETYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 VT + E + + +R+++ I + E+E+ LP + ++ Sbjct: 118 LVTFRLQEGDSFRLAQLIKNREIELAIVRLPL-----EMEDFASLSLPADQFVAVMPNDK 172 Query: 180 EERQ---EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + + + L +LP + ++ + N + G+ P II +S V Sbjct: 173 ADNRSMISMKELAKLPLMLLQRIKGFGLYEKVLENFQKHGLKPNIICDCPDAAMLLSLVR 232 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G T++P + +K D + + ++N + L + Sbjct: 233 SGIGCTLLPKSTLIALPLNGIKMMDIEDSTITSDSAVIWLKNRSLSKVALHFL 285 >UniRef50_P77559 Uncharacterized HTH-type transcriptional regulator ynfL n=179 Tax=Gammaproteobacteria RepID=YNFL_ECOLI Length = 297 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 106/295 (35%), Gaps = 14/295 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I + +R F+ +A+ + RAA +++++ P + I ALE+QIG L R + ++ L Sbjct: 1 MNI-ELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP--TIIFDQLISLGDK 117 AG++ + + + + E+ IG ++ P + D L Sbjct: 60 TAAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRD 119 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 Y V Q E + I L + LD + E+L + + L ++ Sbjct: 120 YPDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALP-----ESLEHAVIVHEPLMAMIPH 174 Query: 178 RYEER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 + L + P++ I MR + P I M I Sbjct: 175 DHPLANNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIG 234 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 V G ++++P R V +++ + +L ++H + Sbjct: 235 LVSAGLGVSILPASFKR-VQLNEMRWVPIAEEDAVSEMWLVWPKHHEQSPAARNF 288 >UniRef50_C6BXQ9 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXQ9_DESAD Length = 301 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 98/296 (33%), Gaps = 12/296 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++++ F+ +A+ + RAA+++ ++ P + I E+++G LF R +++L A Sbjct: 1 METRQLKYFLAVAEELHFGRAAKRLFISQPPLSQQIKKFEDELGVKLFQRNKRSVALTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGID-NTYPTIIFDQLISLGDKYEGV 121 G L + + + + + + ++ + +G T + + + +Y V Sbjct: 61 GVSLLRDAPGIMRAIGRAKSNLLDAATGEGGQFTLGYIGPALETTLTEIIRDFKGQYPSV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + + +D I ++ +L +V + Sbjct: 121 RLDLREMFTTDQLKAIRSGDIDAGIVRL----FRHDVSDLERELFHRESYALVVPDGHPL 176 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L ++ + + G P ++ A ++ V Sbjct: 177 ADRAAVDVSELAGEQFIFFPREGQPRLYDEWMRVFSEAGFVPDVVQEATRKSATVALVAA 236 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 + ++P R + P + + + E R+ + IA R Sbjct: 237 NMGIGIVPESMAR-IKPQGVVFKRLSG-DFPVIEMSLIYRSTNGFPAVDNFIAAVR 290 >UniRef50_A8FAC2 Possible LysR family transcriptional regulator n=21 Tax=Bacillus RepID=A8FAC2_BACP2 Length = 329 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 106/297 (35%), Gaps = 13/297 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R FI++A+ N +RAAE++ M P + I LEEQ+G TLF R + L+ + Sbjct: 33 MDLRQIRYFIMVAEELNFSRAAERLKMAQPPLSQEIRKLEEQLGVTLFHRTRRQVELSDS 92 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLISLGDKYEGVT 122 G+ ++ ++ + + IG ++ ++ D + + + + Sbjct: 93 GRVFLEEARRTLLQVDRTIKATQLADDGKIGHLTIGFVDS-TDMVIDIIKRFRESFPNIH 151 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 E + + L +++ + + ++ LT L ++ + Sbjct: 152 LVLCEMATEQQLKALHKKEIQIGFIRSNQNNKI-----LTSEICCEESLSLVLPENHPLA 206 Query: 183 ----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 LL P++ A F +I + I+ ++ ++ V G Sbjct: 207 SFPKVPIHLLANEPFIMFPRHLGAAFYDLIISYFWENNISLNVVQEAVQMHTIVNLVAAG 266 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDG 295 ++V+ + V + + Y S R+ + + R+ Sbjct: 267 MGISVV-PSSVESVKRSGVVYRKIQE-TTPRVNLYVSWRHDETSTVAQHFLTVVREA 321 >UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B5WR38_9BURK Length = 309 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 101/299 (33%), Gaps = 14/299 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+++A+ + RAAE++ + P I LE IG TLF R + L +A Sbjct: 1 MELRHLRYFVVVAEELHFTRAAERLGIGQPPLSLQIQRLERDIGATLFRRLSRGVELTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP--TIIFDQLISLGDKYEG 120 G L + + ++ R + +G ++ + ++ Sbjct: 61 GVLLLDNARHILALVDRTCTDVQRLSRGEIGHMRVGFAGATYFLPLVPAIIREYRTRHPD 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V P + + ++D L + ++D + + + L + L + ++ + Sbjct: 121 VVLSPEQSNTPSLVDGLLEGRVDAAFIRPPIVS----ADELDVELLVKEDMVVVLPHSHP 176 Query: 181 ERQ-----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + L E +L A I + + G P + ++ V Sbjct: 177 LARAGEPVPLSALAEETFLLFPRAIGAGLYDAITSACQRAGFLPRLGQEAPQIVSIAPLV 236 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRD 294 G ++++P ++ + Y + R H + + A R+ Sbjct: 237 GAGFGVSIVPRSTTQIQTDE-VVYLPIAGN-APKAPISLAWRRHNPSPVVRLFRAVARE 293 >UniRef50_Q7N4W1 Hca operon transcriptional activator n=2 Tax=Photorhabdus RepID=Q7N4W1_PHOLL Length = 294 Score = 279 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 99/291 (34%), Gaps = 12/291 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R FI +A+ N +AA+K+H + I LE+ IG TL R +SL KA Sbjct: 1 MELRHLRYFIAVAEELNFTKAAKKLHTAQPSLSQQIKDLEDYIGSTLLERNKRRVSLTKA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVT 122 G+ Q+ + + + + + IG + + ++I + G Sbjct: 61 GEVFLQQARLILENAEKAKKMARRAAQEQIVLTIGFVPSAEVKVLPEVIPIFRLAHPGAK 120 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 + + G + L +D + + + + + L L+ + R Sbjct: 121 VELISLFNPGQEEKLLQGDIDVAFMRPPIKSDSIDFKV-----ILNEPLVVLMPANHRLR 175 Query: 183 ----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 LQ ++ + +I+ + P II + + ++ V Sbjct: 176 YCEKISVNDLQGENFITPDPTQSGVLQQIIENYFTEHNVVPNIIQTANNMLLILNMVSLN 235 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 ++P + ++ A + E + + R + +L I Sbjct: 236 LGCAIVPFYITSIMTDA-VICRPLSGYS-PTIELIMAWRKDNTSELLLHLI 284 >UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=C9YBM2_9BURK Length = 309 Score = 279 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 110/301 (36%), Gaps = 12/301 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++++R F+ +A+ + +AA ++HM+ P + I LEE +G TLF R ++ L A Sbjct: 13 LETRQLRYFVAVAEELHFGKAAVRLHMSQPPLSQQIRQLEEGLGVTLFERTQRSVKLTYA 72 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFD-QLISLGDKYEGV 121 GQ + +L + + + R + + G + + + +Y V Sbjct: 73 GQVFLAQARNALSKLEEAVDVVRAAARGEAGFLRCGYTAASAYAVIPSVMHAFKQRYPLV 132 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E ++ + +LD + L +L +L L + + Sbjct: 133 EVALRESLSGDQYRDIREGRLDIGLVR-----PFGALPDLATEKLIEENLIVAIPSEHPL 187 Query: 182 RQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 Q + LQ P++ F M++ + + P ++ R A I+ V Sbjct: 188 AQQRIVDIHDLQSQPFVGFSSYGSQYFHDMVENLLGGEKVVPKLVQRATQPHAVIALVSA 247 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 G L ++P + R V+ + Y + E R + + A R+ + Sbjct: 248 GLGLAIVPDASAR-VHMDRVVYRPLHASRLPRPELHLCWRRENISPLISNFKASAREVAA 306 Query: 298 H 298 Sbjct: 307 Q 307 >UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R3Z8_MYCS2 Length = 289 Score = 279 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 108/286 (37%), Gaps = 13/286 (4%) Query: 7 KKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQE 66 + +R F++LA+ + RAA+++H+ + I +E ++G LF R +SL +AGQ Sbjct: 2 RHLRCFVVLAEELHFGRAAQRLHVAQPALSQLIQRVERELGAQLFLRTRRTVSLTEAGQT 61 Query: 67 LYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDK-YEGVTAQ 124 L + + + + + R + + IG + + +L++ + + GV+ + Sbjct: 62 LLPEARRILRDADRVTQAVRAVHRGETGSVTIGFVGSAADDVLPRLVAAHRRHHPGVSIR 121 Query: 125 PVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQE 184 E + ++ L D+++ + + ++ L L V + Sbjct: 122 LEEGTTAQQLEWLRDQRITVGLGRTPIDDPA-----VSTVVLARESLVLAVPDSHALSGA 176 Query: 185 QEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + L E P++ +I + G P+++Y + V G Sbjct: 177 ESAELAGLAEEPFIMFPRHLGPGLYDIIHSACAAAGFTPSVVYETVRMQTIVGLVSGGLG 236 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATML 286 + ++P R + ++Y P E RN + + Sbjct: 237 VALVPESV-RNLGRKGVRYVHLADAP-PAIELSMMWRNDCESPHLQ 280 >UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYT0_RUBXD Length = 293 Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 100/292 (34%), Gaps = 13/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +R F+ A+ + RAA ++H+T K +A LE ++G LF R + L +A Sbjct: 1 MELSHIRYFVAAAEELHFGRAARRLHVTQPSLSKRVAGLERELGVRLFHRTRREVRLTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIG-IDNTYPTIIFDQLISLGDKYEGV 121 G+ + V + E +GR + IG ++ + L +++ V Sbjct: 61 GEIFLEGARRVLEDALRAAEEARKAGRGELGRLEIGFFSPAIYGVLPEILKEYHERFPEV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E++ + ++ + + +++ V E + + + + + Sbjct: 121 RVTLHEWTSSVQLERMREGKIEIGFMRAPV-----EEAGFVTEHVFVEPVVAALPEGHPQ 175 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + L + P++ + N + + G +P I + A + V Sbjct: 176 ARREVVSPRELADEPFIMVPRSKEPNSFDRYVSICQRAGFSPKITQEVFEIHAIVGLVAT 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + + L P + Y + R+ R + + + Sbjct: 236 GMGVAFVQGSVANLKRP-GVVYRPLDDPEARIGT-AIVRRSSRPSPVLRTFL 285 >UniRef50_Q1YDL8 Transcriptional regulator, LysR family n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YDL8_MOBAS Length = 302 Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 99/292 (33%), Gaps = 13/292 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++ +R+F+ +A+ + RAA ++H+ + I LEE++ TL R ++L Sbjct: 1 MVETRLLRSFVCVAEELHFGRAARRLHIAQPALTRQIQQLEERLQATLLNRNQRIVTLTP 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQ-LISLGDKYEG 120 AG+ ++ + + L E+ + + +G ++ + L + Sbjct: 61 AGRMFLERSYRILADLEQAAKEVRRVEAGQEGRLSVGFIHSSTYGVTPLVLRRFRLAFPR 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V + E + + L D Q+D I +S +L L R + + Sbjct: 121 VDLELFEMTIQEQLAALRDGQIDVGILRPPISDP-----SLRARPLREERFVVALPHDHR 175 Query: 181 ERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 L E ++ + F A I G P + I V Sbjct: 176 LAATDRLHLRDLSEDGFILFTQRKSPLFYARIIGMCEKAGFVPRVEQYATQIHTMIGLVS 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G + ++P R +N + Y + P + R + + Sbjct: 236 AGMGVAIVPE-VARSLNIPGVAYVEIADTP-PTVQVCLGWRASDTSPILAAF 285 >UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVR3_RUBXD Length = 305 Score = 279 bits (714), Expect = 9e-74, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 107/297 (36%), Gaps = 13/297 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ +A+ + AA ++ ++ P I ALE ++G LF R + L + Sbjct: 1 MELRQLRYFVAVAEEQSFGGAARRLRISQPPLSLQIKALERELGVRLFDRNTRRVMLTDS 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP-TIIFDQLISLGDKYEGV 121 G+ ++ + + + + R ++ +G ++ +++ + +++ GV Sbjct: 61 GRAFLERARVILEEVERAKETAKGAERGLLGKLEVGFVSSATLSLLPPAIRLFRERFGGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + ID L++ + + + A + + + RL + + Sbjct: 121 ELELRELTSAQQIDALYNGETRVGLVRLPLRAP-----GIHLEPVFEERLVVALPSGHPL 175 Query: 182 ----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 R E + +LP + Q A I + G P + + V Sbjct: 176 EALDRVSLEAIADLPLIFFTRQLIPGLHAQIIELFQRVGAFPNVAQHAVHLQTIVGLVAS 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRD 294 G ++++P A R V + Y + + + ++ R+ Sbjct: 236 GVGISILPSSAMR-VRREGIVYLPLDEDDATSW-LGLAWVEGDDSVLVENFVSIVRE 290 >UniRef50_B9IRL1 HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family n=23 Tax=Bacillus RepID=B9IRL1_BACCQ Length = 310 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 118/295 (40%), Gaps = 14/295 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +K+R FI++A+ + RAA+++HM P + ++ LE+++ LF R N+ L Sbjct: 21 MDI---RKLRYFIVIAEEKQLTRAAQRLHMAQPPLSRQLSLLEQELSVNLFERNGRNMYL 77 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 + G LY K + +L EI ++G ++ IG ++ + +++ D Y Sbjct: 78 TEEGNILYTKAKNIILQLEETITEIKDTGEGLRGKLSIGAFHSCIPFLSEKIRYFQDNYP 137 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V + E + +I+ L +R ++ I + V L+ ++ ++ Sbjct: 138 NVNLKIWEGGPSYLIEKLENRHIELAILRTPFNKDVFSSICLS-----KEPFVLVMPAKW 192 Query: 180 E-----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 E L +P L + ++ ++ + GI I + Sbjct: 193 ELYHSHLPIPLTELSHIPLLLLHKDKENSYHQLVIDECKHLGITLNIACECPDSAFILML 252 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + G +++P A + +K D P + + ++ + + + I Sbjct: 253 IMTGIGASILPKSAVSHIPQEFIKIVDLIDFPYESESSIIWLKGRKLSKRAQRFI 307 >UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=Verrucomicrobiales RepID=B9XBB1_9BACT Length = 299 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 96/292 (32%), Gaps = 13/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ + RAAE++H+ P I LE ++G LF R ++ L + Sbjct: 1 MELRHIRYFVAVAEELSFRRAAERLHLAQPPLSAQIKDLEGELGTKLFERTTRSVRLTAS 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGID-NTYPTIIFDQLISLGDKYEGV 121 G+ + V + + + + IG+ T + + L S +++ GV Sbjct: 61 GRVFLDEARAVLAAAEKAEQRVRKAEHGLVGTLRIGVLAPTATSRLATILRSYRNQFPGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + + +L QLD + V+ + L + V + Sbjct: 121 QFSLHEMTSVEQLQSLRLDQLDVGLLRPPVAFPELDFHFLE-----ESPMVLAVPAGHRL 175 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 E + P + + + + G P + +K+ + Sbjct: 176 AKQRLIEWKDFHNEPMVMIHPSLQHGYYDTFLNLCAKAGSTPIVGQYANDVHSKMWLISA 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + + P + P P+ + L + + + I Sbjct: 236 GFGVAPTTKTIAEVKRPGLVFRELPPGLPLV--QTLIVWKRTNNSPMVGNFI 285 >UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IJK2_METNO Length = 306 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 96/281 (34%), Gaps = 12/281 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F++LA+ + RAAE ++M P + I ALE+++ TLF R I L A Sbjct: 1 MDLRHLRYFVVLAEQRHFGRAAELLNMAQPPLSQQIKALEDELEVTLFDRSTRPIELTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP-TIIFDQLISLGDKYEGV 121 G+ L ++ + +S +G+ +VIG+ + + L++ ++ + Sbjct: 61 GRTLLREARQILHHVSRAQAATRRAGQGQDGHLVIGVTGSAAMEFLPPVLLAFRARWPDI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E S I L ++ V L + + + + + Sbjct: 121 RLSLREMSSPEQIAALERGEIHIGFVRPPVLDD-----RLNVRLVHQDPFVVALPGDHPQ 175 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L + F +I R G P + ++ V Sbjct: 176 AGVEGVRLADLNGTALIIFDPAEAPGFRDLIIHVCRTAGYVPETLESAPQMTTMLALVSA 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRN 278 G ++P A R + + + ++ Y R+ Sbjct: 236 GLGFALVPRSARR-LALERVVFRPLLDPCAAVELYAVWSRD 275 >UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I2X4_THIIN Length = 313 Score = 276 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 95/295 (32%), Gaps = 12/295 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ + RAA+++H++ P + I ALE ++G LFTR + A Sbjct: 1 MDLRHLRYFVAVAEERHFTRAAQRLHVSQPPLSQQIQALETELGVPLFTRGRGGVQRTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTY--PTIIFDQLISLGDKYEG 120 G L + + + GR + + +G + ++ L + Sbjct: 61 GDALLPLARSILDAVEHAVAQTRQVGRGETGRLAVGFAGSMPFTDVMPRLLRDFRAAWPQ 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E ID+L +LD L L + L + + Sbjct: 121 VALDLREQPSQSQIDDLLAHRLDLGFIRTTQLMHDPRLSTLVVQR---EPLLAALHADHP 177 Query: 181 ERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 L L++ P++ A A G NP I + I + Sbjct: 178 LAARASLRLNDLRDQPFVIYSASLGAGLRQQTLALCAQAGFNPHIAQEVHEMPTLIGLIS 237 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 G + ++ R P + Y + L R + IA+ Sbjct: 238 AGLGVGIVAASMQRAQLPW-VAYRPLADVQASTEVLLV-WRRDDPQPPLRNFIAQ 290 >UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGS2_AZOVD Length = 301 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 100/293 (34%), Gaps = 14/293 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + +++R F+ LA+ + +AAE +H+T P + I+ALE +G LF+R ++ L Sbjct: 1 MIELRQLRYFMALAEHLHFGKAAESLHITQPPLSRQISALEADLGVVLFSRHSRSVELTA 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFD-QLISLGDKYEG 120 AG++ Q L S R E+ + I+ L + D Y Sbjct: 61 AGRDFQQHAKTALAELDLAIRSTRASARGERGELRVSFTMVAAWILLPELLKAYSDAYPD 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V+ E + L + D ++ ++L L L ++ + Sbjct: 121 VSLALNEVLPRDLGPALERGEADIALTF-----PSSGSKSLCYRALRREPLCAVLPASHP 175 Query: 181 ERQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 L + P++ Q + + R G P I + ++ V Sbjct: 176 LAAATEFSIAALADEPFITFPRQTAPALHEAVMSCCRRAGFEPKIRLETHLQQTIVNLVA 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G ++V+P R + + + P EY + + Sbjct: 236 EGLGVSVVPGSM-RKMRMPGVAFKAIDRSPPV--EYGVIWNPRNENPCLNTFL 285 >UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=C1M4D9_9ENTR Length = 302 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 109/295 (36%), Gaps = 14/295 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I + +R F+ +A+ + RAA +++++ P + I LE+Q+G L R + +++L Sbjct: 1 MNI-ELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQVGARLLARTNRSVAL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTI--IFDQLISLGDK 117 AG++ + ++ + E+ IG ++ P I + D L Sbjct: 60 TSAGKQFLADSRQILGLVNEAAARAERLHLGEAGELRIGFTSSAPFIKAVSDTLSLFRQS 119 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 Y V Q E + I L + LD + E L + L ++ R Sbjct: 120 YPAVHMQTREMNTREQIAPLNEGTLDLGLLRNTQLP-----ETLEREIILHEPLMAMIPR 174 Query: 178 RYEERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 + Q+ L P++ I MR G+ PTI M I Sbjct: 175 AHPLAQKPVVTLAELANEPFVFFDPHVGTGLYDDILGLMRRYGLKPTIAQEVGEAMTIIG 234 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 V G ++++P R V + + + +L ++H + + Sbjct: 235 LVAAGLGVSILPASFKR-VQLYEMCWIPIAEEDAVSEMWLVWPKHHEQSHAAQRF 288 >UniRef50_B2SBJ3 ALS operon regulatory protein n=36 Tax=Proteobacteria RepID=B2SBJ3_BRUA1 Length = 299 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 96/285 (33%), Gaps = 13/285 (4%) Query: 1 MDI-FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNIS 59 MDI + +R F+ +A+ N RAA K+ + P + I LE +IG LF R + Sbjct: 1 MDIPMELRHLRYFLAVAEEGNFTRAAAKLGIGQPPLSQQIRDLENEIGVMLFHRVPHGAE 60 Query: 60 LNKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP--TIIFDQLISLGD 116 L AG ++ + R S + +G + I+ + Sbjct: 61 LTAAGAAFLEEATATIASSEKAKLAAQRAARGESGRLSLGFTASSAFNPIVSGAIRHFRA 120 Query: 117 KYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVS 176 K+ V E + N +I+ L +LD + N+ + L + + Sbjct: 121 KWPEVELFLTEMNTNLLIERLVRGELDTAFIRPGLEDP----ANVRMKRLADEPMLVALP 176 Query: 177 RRYEERQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 + L P++ + I A R G + + + Sbjct: 177 SHHRLAVYERLPLSALAGEPFVLFPRIVGLSLYDDIAAACRMAGFEMNVTQEAPQMPSVV 236 Query: 233 SAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIR 277 + V ++++P A + + Y P+ + L S++ Sbjct: 237 NLVAANLGVSIVPA-AIAQIRLDGVTYRPIEGEPLVARLALASMK 280 >UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putative n=1 Tax=Ricinus communis RepID=B9TDR3_RICCO Length = 301 Score = 272 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 105/296 (35%), Gaps = 11/296 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M I K+++ F+ +A+ + +RAAE++H++ P + I LE ++G LF R L Sbjct: 1 MSI-DLKQLKYFLAVAEEKSFSRAAERLHISQPPLSQQIMKLESELGVKLFARTTRTFEL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTI-IFDQLISLGDKY 118 AG+ L + + R+ + I R + +GI + I L K+ Sbjct: 60 TVAGKALMSEAADLLARMRMTIDTIRQIDRGEVGRLRVGIVGSAMWGPIPSLLEEFQTKF 119 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQH-VSARVQELENLTISELPPLRLGFLVSR 177 VT E + L +Q+D + + V + +NL + ++ Sbjct: 120 PRVTWTLHEMGPTLQYEALRAKQVDVGFWREPRIDDDVLKNDNLRQELCFREDVCVAINE 179 Query: 178 RYEE----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 + E + E P L + ++F + G PTI ++ Sbjct: 180 HHPLAKQEAIELMDIAEEPMLTLALDK-SSFPRYLMQCCVQAGFQPTIAQEATEPQTLLA 238 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V G + ++P R+ P + + P + + + Sbjct: 239 MVGAGLGVALMPETTSRIGWP-GVVFVPIRSNP-PSANLYITYTTQDDAPVVRAFL 292 >UniRef50_C2FRR6 LysR family transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2FRR6_9SPHI Length = 295 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 107/292 (36%), Gaps = 13/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F LA+ + +AA+K+H++ S + I LE+Q+G +LF R + ISL+ Sbjct: 8 IELRQLRYFRALAEELHYHKAADKLHISQSALSQQIKLLEQQLGVSLFDRLNKKISLSDP 67 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGID-NTYPTIIFDQLISLGDKYEGV 121 G+ Y + + Q++ + S + IG + + + + + Y + Sbjct: 68 GELFYAEAVRILQQVERSMERLDQFHTGSAGTLKIGFVASAMSSFLPEAIKKFHTAYPAI 127 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + + L + +D Q + + I + ++ R + Sbjct: 128 HLRFEEMNNFEQLPALENGDIDIGFMR-----SNQVRDQMHILRVFEETFTLILPRNHRF 182 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 ++ +L++ ++ + I G P I ++ S V Sbjct: 183 GNYHFKDLSILKDEDFILFPNAKSEFYFQQIINLCSDSGFYPRITHQAIHGPTIFSLVGC 242 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G +++IP + ++ + + P Q + + + + Sbjct: 243 GMGISIIPTSLAQ-LHTEDVIAIELKAIPQRTQIFAV-WDKSNQNPQIQRFM 292 >UniRef50_B1J8H5 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J8H5_PSEPW Length = 323 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 94/292 (32%), Gaps = 5/292 (1%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++ +R FI +A+ + +AA ++HM P ++I LEE++G++LF R + L Sbjct: 1 MIETRLLRQFIAVAEELHFHKAAIRLHMAQPPLSQAINRLEEKLGFSLFLRNKRGVKLTA 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPT-IIFDQLISLGDKYEG 120 AG + + + L N ++ I + + + L + Y Sbjct: 61 AGMAFLETAYRTLKELEQGIEYARNVSEGICGKLTITAISIAYYESLLNTLKKFREIYPN 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E L + D + L ++E + L ++ ++ Sbjct: 121 VRLTIREMPSASQAKALMAGEADIGFMRKLPMPPDTIESRLLLNEQIVMALPANHAKAHQ 180 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + E ++ + + + + A G P ++ I V G Sbjct: 181 PMVDLRDFAEEDFVFTPQALGSGYHSQLIALCESAGFYPKVVQEAAQIHTLIGLVACGFG 240 Query: 241 LTVIPHFAWRLVNPATL---KYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + ++P + +P + + + I Sbjct: 241 VALVPESIAYSTLRERVQFRPIRPIKDQPTPTMGLYMNWNTQNASPALGSFI 292 >UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=Proteobacteria RepID=A0K8T5_BURCH Length = 308 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 110/298 (36%), Gaps = 13/298 (4%) Query: 2 DIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLN 61 D +++R F+ +A+ + RAA+++ ++ I E+ +G LF+R + ++L Sbjct: 7 DTVELRQLRYFVAVAEELHFGRAAKRLFISQPALSFDIRKFEDALGVQLFSRTNKTVALT 66 Query: 62 KAGQELYQKLFPVYQRLSAIDN-EIHNSGRRSREIVIGIDNTYPTI-IFDQLISLGDKYE 119 AG+ L + + + + + ++ + + IG ++ + D + Y Sbjct: 67 NAGEVLLGEARRLLLQADEAERLTVRSASGLAGRLRIGFVHSMLYRGLPDAVRRFEADYP 126 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 GV E + + + + Q+D H E+E++ + + + Sbjct: 127 GVEVVLSEMNTHAQVQAIQRGQIDLG--YAHWGHFPPEVESVAV---YAEPFVCCLPAAH 181 Query: 180 EERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + +++ L P++ ++ +I A G +P I + + +S + Sbjct: 182 PLARRRQVALATLATEPFILFPRDAAPHYHDLIIAQCVNAGFSPLIRHEARLWQTILSMI 241 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 E G + ++P + L + + + R+ L+ R Sbjct: 242 EFGMGIALVPR-VLQQAKSDRLAFLPLKDASLESRTLAL-KRSGTAEPVALRFAGYVR 297 >UniRef50_Q9RYH7 Transcriptional regulator, HTH_1 family n=2 Tax=Bacteria RepID=Q9RYH7_DEIRA Length = 316 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 120/298 (40%), Gaps = 13/298 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A N+ RAA ++ + P + I LE +IG LF R + L +A Sbjct: 17 MELRHLRYFLAVADERNVTRAAARLGIQQPPLSQQIRELEREIGTPLFHRVPRGVELTEA 76 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDN--TYPTIIFDQLISLGDKYEG 120 G + + + ++ +E +GR + E+ +G + + L D Y Sbjct: 77 GHTFLRLVQSIPAQVEGATHEARRAGRGETGELRVGFTGAASINPQVQGLLRRYRDLYPD 136 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E + ++D L QLD +++ Q L +LT++ + + +V R + Sbjct: 137 VRLTLTEKNTVTLLDELRSHQLDAVLARP----LPQHLGDLTLTLVAREPMVAVVPRGHP 192 Query: 181 ERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 Q + L L++ ++ + + R G P + ++ +S V Sbjct: 193 AAQTRPLPLERLRDETFITTPREFGPLIYDTVWQACRAAGFEPRLGQLAPQMLSIVSLVA 252 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRD 294 G ++++P A R +N +Y + P+ + R H AT+L A D Sbjct: 253 AGLGVSLVPD-AMRRLNLEGCEYLEL-RPPVPTVDLTLLCRPHERAATVLNFTALVGD 308 >UniRef50_A6UMN5 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UMN5_SINMW Length = 296 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 100/296 (33%), Gaps = 13/296 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +++++ +A+ + RAA++++++ P K I LE ++G LF R + L A Sbjct: 1 MEHRLLQSYVAVAEELHFGRAAKRLNISQPPLTKQIQQLERELGVALFERTKRKVELTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G L ++ + ++ + + R + + +G + + ++ Y V Sbjct: 61 GSVLLEEARRLLRQTENAAELVRKTERGETGHLAVGFIDAAIYSLVPNVVECFTRSYPHV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 T + + + + + +LD + E L I + L V +R+ Sbjct: 121 TVELADLRIPDQVRGVSEGRLDVGFIHPPIRG-----EQLAIETVLVEPLVVAVPQRHRL 175 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L +Q I + G NP I+ I V Sbjct: 176 ASRAEIPLAELANEALIQFPRSINPTLYDEIIGLCQSSGFNPKIVREATPKQTIIGLVSV 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 G ++++P + + Y P + R+ R I R Sbjct: 236 GLGVSLLPR-CLENLKRDGVAYRPISG-PNLSIDTSIIYRSDRLRPATKAFINVVR 289 >UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=Micrococcaceae RepID=A0JW92_ARTS2 Length = 306 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 107/293 (36%), Gaps = 17/293 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++ ++ FI +A+ + RAA ++HM P + I LEEQ+G L R + L A Sbjct: 1 METRHLKYFIAVAEERHFGRAAARLHMAQPPLSQQIRQLEEQLGTPLMVRTTRKVELTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 GQ L + + Q L +++++ G + + +G T + ++ + G+ Sbjct: 61 GQVLLDRGRVLLQELQVLESDVQQVGEGATGVLRVGFTGTATYRLMPIIVQAARRTLPGL 120 Query: 122 TAQPV-EFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 E + L + +LD + V + L+ L +L + Sbjct: 121 RITVQGEMLTPQMEAALEEGRLDAAVLRPPVHSGAIALKLLE-----QDQLVAALPADSP 175 Query: 181 ERQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + E L E ++ + ++ R G P ++ +S V Sbjct: 176 LAEKGTLELAALSEEGFIGYPGY--SAVSSIFVDACRKAGFQPRVVQEAKETSTLLSLVA 233 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + ++P R+ + + + + P + + + + T + + Sbjct: 234 SGMGIALVP-MTSRMFSYQGVAFRPLRNPPPM--DLAVAWNSDKETPLLRAFL 283 >UniRef50_B2JUD8 Transcriptional regulator, LysR family n=12 Tax=Burkholderia RepID=B2JUD8_BURP8 Length = 298 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 105/293 (35%), Gaps = 13/293 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ N+ RAAE++ + P + I ALE+++G LF R + + L +A Sbjct: 1 MELRHIRYFLAVAEERNVTRAAERLGIGQPPLSQQIHALEDELGVRLFRRTGHGVVLTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP--TIIFDQLISLGDKYEG 120 G+ + ++GR + IG + ++ + + Y Sbjct: 61 GESFAADAKRILHDTRLAVENAQSAGRGEIGQFNIGFTGSAAFNPVVSKLIRAYRQAYPN 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 VT E + ++ L D ++D + + + + ++ + Sbjct: 121 VTLTLAEGNTAQLLAYLDDDRVDVAFVRLGSQSP----AGVQFHHIAIEPMKIVLPATHR 176 Query: 181 ERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 ++ L E P++ + + +I R G P + + ++ V Sbjct: 177 LAKKRKIALSALAEDPFVMLPREASPTLHDVIVGACREAGFEPIAGQQAPQLSSVVNLVA 236 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 ++++P + + + Y D + ++ + R A + Sbjct: 237 AEFGVSLVPASVCQ-IQVEGVVYTDVLGSSISIR-LALASRIESTPAKTANFL 287 >UniRef50_C1DL37 LysR family transcriptional regulator protein n=2 Tax=Proteobacteria RepID=C1DL37_AZOVD Length = 312 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 108/305 (35%), Gaps = 15/305 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+++A+ + RAA +++M P + I ALEE++G+ LF R + L Sbjct: 1 MELRHLRYFVMVAEEKHFTRAAARLNMQQPPLSQQIRALEEELGFALFLRHPKGVELTAG 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPT--IIFDQLISLGDKYEG 120 G+ ++ + R++ ++ + + +G ++ + +I + ++ G Sbjct: 61 GEAFLREAQDILARVAQGASKAARVAQGIEGMLALGFTSSATSHPLIPRIIREYRARFPG 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E + + +++ +D + V+ + L + + + Sbjct: 121 VEIALSEDNAQRLTESVTAGGIDLGVLRAPVANP----AGIEFHRLLVEDMLLTLPVDHP 176 Query: 181 ER--------QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 L ++ +R A + A R G P I + + + Sbjct: 177 LATDAARREGVPLAALARERFILVRRPGAPGMYANLIAACRNAGFEPAIAFEVERMLTNV 236 Query: 233 SAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAED 292 S V G ++V+P L +P + R + + IA Sbjct: 237 SLVAAGAGISVVPASMKDLHRDNVAYCRLRGAKPRLVAPVTLVCRGFNQSPPLRNFIALA 296 Query: 293 RDGTS 297 R ++ Sbjct: 297 RQLSA 301 >UniRef50_Q1ATU8 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ATU8_RUBXD Length = 301 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 98/292 (33%), Gaps = 11/292 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ + RAA ++H+ I LE ++G LF R ++ L +A Sbjct: 1 MELRHLRYFVAVAEELHFGRAARRLHIVQPTLSAQIQRLEAELGAQLFHRTKRSVRLTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIF-DQLISLGDKYEGV 121 G+ + + E + + + +G + + D + +Y GV Sbjct: 61 GKAFLVEARLALEHSERAVREARRMAASETGRLDVGFVPSATYSVLTDVVGLYRRRYPGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 P E + ++ L + ++ E + L + +L ++ R + Sbjct: 121 DLVPREMHSSVQVEALLEGSIEVGFLRLPSDH---ESDELEVRPFVREQLVAVLPRGHRL 177 Query: 182 ----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 R E L +L R + + + G P + ++ Sbjct: 178 ASLRRVPLEALAGESFLIPRREREPGYHEQLLEVCGTAGFVPKVAQETTELQVGMALTAT 237 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G ++ + P R V + + P+ E + ++ + + Sbjct: 238 GGYVGLFPAS-TRHVKMTGVVFKRL-AEPVPEMELSVAWQSGELSPATRAFL 287 >UniRef50_Q13QG4 Transcriptional regulator, LysR family n=4 Tax=Burkholderia RepID=Q13QG4_BURXL Length = 302 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 109/297 (36%), Gaps = 13/297 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+ + ++ F++LA+ N +RAAE++H+ + I +LEE++G L R +SL Sbjct: 1 MNHMNLRALQCFVILAEELNFSRAAERLHIAQPALSQQIRSLEERLGTQLVDRARRPLSL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGID-NTYPTIIFDQLISLGDKY 118 +AG L + + L + G R + IG ++ +++ L + + + Sbjct: 61 TEAGHYLCSEARQILGTLEQMTVVAQEIGIGRRGWLSIGFTRSSMYSVLPPALKAFHEAF 120 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + E D L D ++ I Q ++ +E T L + + Sbjct: 121 PQVELKLFEMLTEEQTDALRDMRIHIGIGRQPLA-----VEGCTSYPLLSEPVMAALEPG 175 Query: 179 YEER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + L + P + A F+ + + R GI P + + Y I+ Sbjct: 176 HPLAAHKKVRIADLADTPLILYPKHQNAQFKRSVLSLYRDAGITPAVAHEAYEIQTAIAL 235 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHR-PMYMQEYLYSIRNHRYTATMLQHIA 290 V G +T I R + + Y + R + + +A Sbjct: 236 VAAGLGVTFIGESVARHGRTD-VAFRHLTGPGSSYRSTLAATFRTDDPSPHLRAFLA 291 >UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 Tax=Bacteria RepID=A7ZAT2_BACA2 Length = 302 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 115/295 (38%), Gaps = 16/295 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++ F+ +A++N+ +A+E +H++ K + +LEE++ L R I+L Sbjct: 1 MDI---RQITYFLEVAKSNSFTKASENLHLSQPALSKMVKSLEEELKVELIDRSARQIAL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKY 118 AG+ ++++ + + + + +++ + ++ IGI + F ++I Y Sbjct: 58 TDAGEIVFEQGQMIMKSIDDLSTNLYDLLHLKKGKVKIGIPPLIGVLFFPKIIRGFKQLY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + +E N V + D LD + + V + E I L L V Sbjct: 118 PDVNIKLIEHGGNKVKQEVEDGVLDLGVVIEPV-----DEEQFDIIPLLNEELMLFVHSA 172 Query: 179 YEER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + E + L+ P++ + I G P I+Y + Sbjct: 173 HPLVHKEIVEMQDLKNEPFILF--SEDFSLHDRIIQECIRAGFRPNIVYESSQWDFISEM 230 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + +++ P + + + +K + + + + + + + + I Sbjct: 231 IGEELGISIFPQSIVKKTDQSLVKAISIVNPSIPWKVAIILKKGKYVSHAVREFI 285 >UniRef50_A6LVD0 Transcriptional regulator, LysR family n=5 Tax=Clostridium RepID=A6LVD0_CLOB8 Length = 288 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 114/295 (38%), Gaps = 19/295 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI K+++ F +A+ I AA+++HM P + LE+++G L R NI L Sbjct: 1 MDI---KQLKYFYAIAEEGQITNAAKRLHMAQPPLSYQLKNLEDELGVKLVERGSRNIRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFD-QLISLGDKY 118 AG LY++ + + +NE+ + + + IG ++ + D +L +KY Sbjct: 58 TDAGVILYKRAKQILSLTKSTENELKDFKQGNHGTLSIGTVSSSGASLLDSRLNIFHEKY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + + E + +++ L ++ I + + LP + + + Sbjct: 118 PFINFEIHEGNTYELLELLDKGIIEIAIVRTPFNNS-----GINSIFLPKEPMVAAMRKD 172 Query: 179 YEERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 L + P + R FE++I + PT+ + + Sbjct: 173 LNWTDSEIINITELNDKPLIFYRR-----FESLIFKVCQDFNFQPTVFCKNDDARTSLLW 227 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + ++P A +L+ +++ Y + + Q + + +++ + Sbjct: 228 ANSGLGIAIVPKSAIKLIGSSSIIYKEIDSDILTTQIAIIWSKTGYLSSSGKNFL 282 >UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=Paenibacillus RepID=C6CYG5_PAESJ Length = 297 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 110/293 (37%), Gaps = 11/293 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++++ I +A N +RAAEK+H+ + ++ LE+++G LF R N++ L +A Sbjct: 1 MELRQLQYVIQIAIEKNFSRAAEKLHIAQPSLSQQLSKLEQELGVLLFRRTTNSVELTQA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQ-LISLGDKYEGV 121 GQ K + + + E+ + + + +V+G + I L G+ Y + Sbjct: 61 GQVFVDKSQSILDAIEQLKQEMDDMAQMKRGRLVVGTLPITGSHILPLVLPVFGELYPQI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 VE + + + D + + + E E L E+ L S R Sbjct: 121 EVILVEDTTVKLEQLTANGGTDISLLTLPLVDQTLEWEPLMEEEIC---LAVPPSHRLAG 177 Query: 182 R---QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 R E L+E ++ + + F ++ + G P I++ + S + G Sbjct: 178 RTDEISIEELREEHFVGL--KKGQGFRQILVHLCQQAGFTPNIVFESSNIETVQSLIAGG 235 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 +T +P R + + + + R RY + E Sbjct: 236 MGITFVPKMLTRAAG-GDFVPVYLSLKDRPSRTLIIASRKGRYLSKAAVAFIE 287 >UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=Streptomyces RepID=D1WWA8_9ACTO Length = 310 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 97/286 (33%), Gaps = 14/286 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ + RAA ++ M P + I LE+++G LF R ++ L A Sbjct: 1 MELRHLRAFLAVAEELHFGRAARRLQMAQPPLSQRIRQLEKELGVQLFHRNTRSVRLTGA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQL-ISLGDKYEGV 121 G+ + V L ++GR + IG +L ++ + G+ Sbjct: 61 GETFLDPVRTVLDDLDTAVRAARSAGRGEYGRVTIGFAGASSHETLPRLTRAVRAAHPGL 120 Query: 122 TAQPVEFSENGV-IDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + V + + D LD VS E + EL + + Sbjct: 121 ELVMTGQTYANVALSRVADGSLDLGFVRLPVSRPGVEHRVIDEEELL-----CALPSDHP 175 Query: 181 ERQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + L + P++ + + G P ++ ++ V Sbjct: 176 LARHEAVSLADLADEPFVSFPANTGSTVRDALTEACESAGFTPRVVQEAPDSYTIMALVA 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYT 282 G +T+ + R + + L Y P+ ++ + R + Sbjct: 236 AGVGVTLT-VTSVRHIQQSGLVYRPLTGPPI-RRQAALAWRADNPS 279 >UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNC1_BORBR Length = 297 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 97/300 (32%), Gaps = 13/300 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + + F+ LA+ N RAA + H+ +P ++I ALE ++G TL R N+ L A Sbjct: 1 MNLRHVHYFVTLAEELNFTRAAARCHIEQAPLSRAIKALERELGLTLLIRNTRNVELTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIG-IDNTYPTIIFDQLISLGDKYEGV 121 G+ + L + + ++ I + +T ++ + + Y V Sbjct: 61 GRLFCDCARVALEELELGARRARRAQEGAIGQLTIAHVGSTVYELLPSIIRAFKRGYPLV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + + I L +D + L + L + + Sbjct: 121 DLRIRQLTTREQIPGLIAGDIDVGFVRV-----APDSGQLAAARLYAEPFVCAIPDWHPL 175 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + + L P++ + + + R G P I + + V Sbjct: 176 AGRESVALGELASSPFIMLMRSPAPSLHQQVLDLCRKAGFEPRIAQEVEQIESTVGLVAS 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 G + ++P R ++ ++ Y E + + + + RD Sbjct: 236 GIGVALVPAS-LRKLSIRSVCYVPLCDV-AEQVEVWVAWPREQASPVAQAFLQCARDTLP 293 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 105/292 (35%), Gaps = 16/292 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F +A+ +++ RAA ++H+ K I+ LE ++G TLF R ++ L +A Sbjct: 1 MELRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIH-NSGRRSREIVIGIDNTY-PTIIFDQLISLGDKYEGV 121 G+ L + ++ + G ++ + IG T ++ L +Y G+ Sbjct: 61 GEALLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTVGAHLLPPLLTIFHQRYPGI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 T + E ++D L D + V+ E LT++ L L +VS + Sbjct: 121 TLRLHEAGIQSLLDLLEAGITDLAVVALPVTD-----EQLTVTPLLNEPLVLIVSTTHPL 175 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + E+ L+ W+ + R G P + + V Sbjct: 176 ARRSEVMMTELRHERWIL--SPSSYELREATLKACREAGFTPQTVLEGGETETLVRFVAA 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G ++++P A + R+ R + + + Sbjct: 234 GLGVSLVPALAVAGCTD---VVRLTVSDQHLTRSLGLVWRSDRTASPAARAL 282 >UniRef50_UPI00016C47B2 transcriptional regulator, LysR family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C47B2 Length = 291 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 106/295 (35%), Gaps = 17/295 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQ---IGYTLFTRKDNNISL 60 ++R F+ +A+T + RAAE+ +T + I LE + +G LF R + L Sbjct: 1 MELHQLRYFVAVAETGSFTRAAEREDVTQPTLSEQIMRLESKPHGVGRRLFDRLGRKVVL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFD-QLISLGDKYE 119 AG+EL + + + + +S + +G T + + + Sbjct: 61 TDAGRELLGHAQGILAAVKEAERAVRDSAEG-GSLRVGAIPTIAPFLLPGTVTRFRKDHP 119 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V Q E ++ +L +LD + V L + +L L + ++ Sbjct: 120 NVQLQLKEDLTERLLADLLAGELDVALMAMPVRDD-----RLHVEKLFAEPLVMALPAKH 174 Query: 180 EER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 E + + E P++ + + F + + G+ P ++ R + ++ V Sbjct: 175 ELASKTEVKLADVLEEPFILL--DDMHCFGDQVLSLCHRGGLEPRVVCRGEQIVTLLAMV 232 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 G ++++P A Y +P ++ R+ L+ + Sbjct: 233 AAGQGVSIVPEMAATADTSKQCAYRPL-GKPTPVRTLCAVWHKQRFRPPSLRALV 286 >UniRef50_Q97GH3 Transcriptional regulator, LysR family n=2 Tax=Clostridium RepID=Q97GH3_CLOAB Length = 286 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 106/295 (35%), Gaps = 20/295 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI K+++ F +A+ I AA+K+H+ P + LE ++G L R NI L Sbjct: 1 MDI---KQLKYFYTIAEEGKITTAAKKLHIAQPPLSYQLKNLETELGVKLVERGSRNIKL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIF-DQLISLGDKY 118 AG LY + + +E+++ + + IG ++ + + LI KY Sbjct: 58 TDAGLMLYNRAKQILNLTQTTIDELNDFKNGTHGTLSIGTVSSSGWSLVNNILIKFHKKY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + + E + +++ L ++F I ++ L LP + ++ Sbjct: 118 PLINFEIHEGNTYELLEILKRGIIEFAIVRTPFNSY-----GLNCIYLPKEPMVAVMRED 172 Query: 179 ----YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + L++ P + R FE +I P + + + Sbjct: 173 FNYSLSNTTKISELKDKPLIFYRR-----FEKLIYEACENSNFRPKVFCKNDDARTTLLW 227 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + ++P + + L Y + Q +N+ +++ Sbjct: 228 ASAGFGIAIVPKSVVS-LGNSNLIYKKIEDASLSTQLAAIWPKNNYISSSAKNFF 281 >UniRef50_B9JZE6 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9JZE6_AGRVS Length = 309 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 104/304 (34%), Gaps = 14/304 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + + +R + +A+ ++ RAAE++ + P + I ALE ++G TLF R+ ++L + Sbjct: 1 MIELRHLRYAVTVAEEGHLTRAAERLGLQQPPLSQQIKALETEVGVTLFIRQPRGMALTE 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTY--PTIIFDQLISLGDKYE 119 AG + + + + R E+ IG + ++ + ++ Sbjct: 61 AGVAFIARARQILADVDMAVEAAQRAARGEIGELAIGFTTSAVFHPLVPSIVRAMRLSSP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 + + E S ++ L +LD A L+I + + + + Sbjct: 121 SLKLRLDEGSTTELLCELSAGRLDAAFIRATAGALPGSGPTLSIETVDIEDMVLALPDTH 180 Query: 180 EER----------QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFM 229 L ++ R I A + G +P + + Sbjct: 181 PLALHSQNGDRDTVALAALAGETFVLYRRPLAQGLYDRIIAACQAAGFSPNVAQEAPKLV 240 Query: 230 AKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + +S V G L++IP R + + + Y + R Y + + Sbjct: 241 STLSLVAAGLGLSIIPQSMAR-LETSGVAYRRFAPGSGLDAPLSLAYRRDSYRGALKTFV 299 Query: 290 AEDR 293 E R Sbjct: 300 EEVR 303 >UniRef50_C3BCJ4 Transcriptional regulator LysR n=1 Tax=Bacillus mycoides Rock3-17 RepID=C3BCJ4_BACMY Length = 298 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 103/292 (35%), Gaps = 9/292 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 KK+ F+ + + I RAA ++H+ P + ALEE++G L R L + Sbjct: 1 MDLKKLIYFVTIVEEGQITRAANRLHIAQPPLSMQLKALEEELGVILINRDKKEFELTHS 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYEGVT 122 G Y++ V + + E+ ++ IG + + L +KY VT Sbjct: 61 GFTFYRRAKEVLDSIDGMITEVKEEQEGLRGKLSIGTVKSCVPYLLPLLNKFKEKYPDVT 120 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQ-ELENLTISELPPLRLGFLVSRRY-- 179 Q E + + L ++++ I + ++ + +L+I L L + + + Sbjct: 121 FQLWEEDSQRLEELLLSKKIELGIVRLPLQSQDVKNINSLSIYPLHSEPLVAIQPKDWDK 180 Query: 180 --EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 E L+ P L + Q + G P II + E Sbjct: 181 FESNVVTIEELKNFPLLILHSQGDIYIFHKFVETCKTHGFTPKIICESSDVSTLMKLAEL 240 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSI-RNHRYTATMLQH 288 G + ++P A L+ +L YF+ P + N + Sbjct: 241 GVGIAIVPKVAVHLLQQESLSYFEI--VPKIKSDTALIWIENKYMSKAAHNF 290 >UniRef50_UPI0001745DD5 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DD5 Length = 290 Score = 267 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 101/293 (34%), Gaps = 14/293 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++R + +A+T N +RAA+ H++ + I LE+++G LF R + L +A Sbjct: 1 MELHQLRYMVAVARTGNFSRAAQTCHVSQPSLSQQIQKLEDELGERLFDRLRRHAKLTQA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 G+ + + + + A E + I +G+ T + +LI + KY GV Sbjct: 61 GERFLPRAVRILEEMDAATREARAANDLDQGRITVGVLPTIAPYLLPKLIAAFSAKYPGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + + + ++D I+ + E + EL L + + Sbjct: 121 QVVVHEDTTARLRELTAACEVDIAIASLPLQD-----ERFEVRELFDEELLLALPNNHRL 175 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + E L E ++ M + + +P + R S V+ Sbjct: 176 VDQKKIIPEDLLEEKFILM--KEGHCLGDQVLHFCHRQDFHPQVSCRSAQMETVQSLVQS 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 G +T++P A + Y P + + R Sbjct: 234 GMGITLVPRMALQEDRSVKPVYRSLSD-PSPKRTIVAFWPRQRPLGKAAAAWL 285 >UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J455_9BACL Length = 307 Score = 267 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 109/299 (36%), Gaps = 18/299 (6%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ + +A+ N +RAA+K+H+ + ++ LE+++G LF R + + L A Sbjct: 1 MELRQLLYTLKIAEEKNFSRAADKLHIAQPSLSQQLSKLEQELGVKLFQRNTSTVELTYA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFD-QLISLGDKYEGV 121 G + ++ + E+ + + R+ +V+G + + L + Y + Sbjct: 61 GASFIAHAQKIMDAVAQLRQEMDDISQLRAGRVVVGSMPITGSHLLPYVLPAFKASYPNI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 +E + + + D + + L+ + + V + Sbjct: 121 QVTLLEDTSLNLEKLTAEGGTD-----LSLLSLPLLEPTLSYEPIGEEIIDLAVPPDHPL 175 Query: 182 RQ---------EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 + E + L+ P++ + + F M R G P +++ + Sbjct: 176 TKTPGVLEQGVEMKQLENEPFIVL--KKGQGFRKMTADLCREAGFEPNVVFESNNIETVQ 233 Query: 233 SAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 S V G +T++P F R + + P + + + R RY + + E Sbjct: 234 SLVAAGMGITLVPRFIARAKRSELIPAYLPLAAPAPSRTLVIAYRKGRYLSKAAEAFIE 292 >UniRef50_Q11BY5 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11BY5_MESSB Length = 307 Score = 267 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 106/293 (36%), Gaps = 12/293 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 K+++ F +LA+ + RAAEK+++T SP +I LE+++G LF R ++ L + Sbjct: 1 MNLKQLQYFSVLAEELHFRRAAEKLNITQSPLSIAIQNLEQELGAKLFHRNQRSVQLTEV 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGID--NTYPTIIFDQLISLGDKYEG 120 G+ LY + RL + +I ++ ++ I ++ + + + K+ Sbjct: 61 GRRLYDHAQGLISRLEHCEQDIRAIVNGKAGQLRIAFTAASSLLSPFPKLISAFQKKFPE 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + Q + I L + +D + + + E ++ L RL + + Sbjct: 121 IDVQLQSMTTVQQISALSEGTIDIGLLRRPRQSIPAE---ISTRRLATDRLVVALPSGHP 177 Query: 181 ERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + L + ++ + G P I+ + V Sbjct: 178 LTSKSVVAIPELAKEKFIFFPRKMGIGIYDQFIKLCGKWGFAPDIVQEAEEATTIVGLVA 237 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + V+P R + L++ E L + R + Q + Sbjct: 238 AGLGVAVVPGG-LRYIQIPNLEFRHIADEDAIT-ELLLAFRTGEANLKVQQLV 288 >UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter formigenes RepID=C3X7G6_OXAFO Length = 291 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 111/296 (37%), Gaps = 15/296 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R F +A+ I+RAA+++H+ P + LEE++G L R ++SL Sbjct: 1 MDI---RQLRYFCAIAEEGQISRAAQRLHIAQPPLSYQLKLLEEELGVKLIDRNTRSLSL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPT-IIFDQLISLGDKY 118 KAG YQ+ + + E + + + IG I +++ +Y Sbjct: 58 TKAGLAFYQRAEQILGLMKVAAIEARDVEYGVNGVLTIGSPPAIGNIYIPERIKRFHQEY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V Q E + +++ L ++F I+ V E + L + Sbjct: 118 PHVRFQWREGNTYRILELLNADMIEFGIARLPVPMGSYESK-----PLLTESWMAVSRND 172 Query: 179 YE-----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 + E L+ +P + M+ Q + M+ M+ G+N + + A +S Sbjct: 173 DPKWIGKDNIGLEELEGIPLILMQRQAGIHCHDMVIDEMKNKGVNADVFCESDNISAILS 232 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 VE + ++P + + + + ++ +A + Sbjct: 233 LVEAELGIAILPVSTLSVRPSGDFHAMAIANCQLQSSSAILWKKDKPLSAAAKLFL 288 >UniRef50_A4W926 Transcriptional regulator, LysR family n=1 Tax=Enterobacter sp. 638 RepID=A4W926_ENT38 Length = 303 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 99/297 (33%), Gaps = 11/297 (3%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++ + FI +A+ + RAA+++HM P ++I LE++IG +LF R + ++SL Sbjct: 1 MIETRLLTQFIAVAEELHFNRAAQRLHMAQPPLSQAIRRLEQEIGVSLFERTNRSVSLTP 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTI-IFDQLISLGDKYEG 120 AG V + L +I + + + + + L + Y Sbjct: 61 AGVTFLDSARDVLRLLDEGVEKIRRVSQGIEGHLTLTFISLAGYAPLLRALKNFRAAYPA 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V+ E + ID L + D + L + + + + Sbjct: 121 VSFTMEEATTQEQIDALEQGRADLGFMRPP----GRTSPGLRFDAILREPVVIALPAAHR 176 Query: 181 E----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + LQ ++ F + G P I + ++ V Sbjct: 177 LVDSGTVKLAALQNDHFVSPPRHLGQGFHDQLIQLCEAAGFRPHISQQARQLQTLVTLVA 236 Query: 237 RGHFLTVIPHFAWRLVNPATL-KYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAED 292 G + ++P + + + + L N R T+ + + E+ Sbjct: 237 SGFGVALLPASLAHEMREDVVFRPLEVDAPDELKHVELLMGWNARSTSIIRDKLIEE 293 >UniRef50_A5VFC0 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A5VFC0_SPHWW Length = 315 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 101/302 (33%), Gaps = 11/302 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A + RAA+++ ++ P K I ALE+++G LF R + L +A Sbjct: 12 MDLRHLRYFLRVADEMHFGRAAQRLGISQPPLSKQIRALEDELGVKLFDRTSRRVRLTEA 71 Query: 64 GQELYQKLFPVYQRLSAIDNEIH-NSGRRSREIVIGIDNT--YPTIIFDQLISLGDKYEG 120 G+ + ++ + +G + + + L Y Sbjct: 72 GRLFEPEARRALEQADRAARIARLAHSAEIGRLGLGFTTSGPFIPFVARALHRFRRTYPD 131 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY- 179 V E + I+ + RQLD I + + + + + L + V + Sbjct: 132 VELILREQGRDEQIEGVLSRQLDIGIVRDYRTPVLPD--GVVAQCLQQEEMILAVRDDHW 189 Query: 180 ----EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + L++ P + N F A G P I + S + V Sbjct: 190 LARRPQPPRIADLRDEPLVLYGPPNGTGFTEHFFALCEEAGFVPKIAHEARSLATLLGLV 249 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDG 295 G T+I R ++ + ++ A + I E+RDG Sbjct: 250 SAGFGPTIIAQSMAR-LHVDNVVNRSFAAPSPSSLWLVHGEELSPTGAAFRRTILEERDG 308 Query: 296 TS 297 + Sbjct: 309 EA 310 >UniRef50_Q8XFS3 Probable transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XFS3_RALSO Length = 306 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 97/294 (32%), Gaps = 12/294 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F++LA+T + RAA ++ + P I LEE++G LF R + + L A Sbjct: 1 MDLRRLRYFVVLAETLHFGRAALRLSIAQPPLSHQIRVLEEELGARLFDRNNRRVELTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP--TIIFDQLISLGDKYEG 120 G L + + + R E+ IG + +I +++ + G Sbjct: 61 GMALLPEARALLAQAEKASTIAARVERGELGELRIGFTSAAALTQVIPRLILAYRRDWPG 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E + + + +R+LDF + + L + ++ Sbjct: 121 VRLSIRELTTQEQLTAMLERRLDFAFVRGTAAPDLP--PAFGAVRLFEDAFVVALPPQHP 178 Query: 181 ERQE-----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + L P++ ++ + + R G P ++ S + V Sbjct: 179 CADNDGSLFVKALANEPFVMYPPESGTGAYEQVLSLCRHAGFAPQVVQEALSAATMVGLV 238 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + ++P R+ F A R + + Sbjct: 239 AAGLGVALVPESFQRIEASG--VAFRALRDSQAKSAMWLVFRADEVSVREAAFL 290 >UniRef50_Q3JWC0 LysR family regulatory protein n=26 Tax=Burkholderia RepID=Q3JWC0_BURP1 Length = 322 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 99/294 (33%), Gaps = 12/294 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + +++R FI++A+ + +AA+++H+ P + I+ALE ++G LF R ++ L Sbjct: 16 MIDLRRLRYFIVVAEELHFGKAAQRLHLAQPPLTRHISALEGELGLRLFDRSTRSVKLTA 75 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP--TIIFDQLISLGDKYE 119 G+ V + + + ++ +G ++ P + + + Sbjct: 76 EGELFLPHARDVLDAVHRAEIASQRAALGKEGKVALGYTSSVPLCDAFGTLIRNFARSFP 135 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 + VE S ++ + LD I ++ E + + L VS+ Sbjct: 136 DIELSLVEASSAQQGRSIKEGLLDIGIGW---KNSFEDYEGCRVKTIAAEPLVVAVSQER 192 Query: 180 EERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 E L L + ++ + + G P I+ V Sbjct: 193 ALASEASLAVEQLADETFVLFPPGYGSTLDRKAFDLCATAGFTPRRGPSASQMTTMIALV 252 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + ++P A + + Y ++ L R + + Sbjct: 253 AAGRGVAIVPE-AVSTLRKPGVAYVPLTDESALIELVLM-WREAGLSLAARSFV 304 >UniRef50_Q1DBN8 Transcriptional regulator, LysR family n=2 Tax=Cystobacterineae RepID=Q1DBN8_MYXXD Length = 301 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 109/291 (37%), Gaps = 13/291 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++++ F+ +A+ + RAA +I M PF + I LE ++G L TR ++L A Sbjct: 1 MEFRQLQLFVAVAEELHFGRAAARIGMAQPPFSQQIRRLESELGVELLTRTSRRVALTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGI-DNTYPTIIFDQLISLGDKYEGV 121 G L + + R + + + + + + + +G ++ ++ D ++ ++ V Sbjct: 61 GSRLLEDARALLARRADVIHSVQQAASGETGTLRVGFAASSAFGVLPDIVLRFRTRFPKV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + V L +LD I E LT+ L R + R+ Sbjct: 121 KLELDDSETLDVGAALVSGELDIAIIRAPFRH-----EGLTVERLLQERFVLALPARHPR 175 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 ++ L P++ + ++ + G +P I+ S+ + + VE Sbjct: 176 ARQQVVALSSLANEPFVLFPRHSAPGLHDLVTSMCLGAGFSPNILQEASSWPSVVGMVEA 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G LT+ P + L P + + P E + + R Sbjct: 236 GLGLTIAPASSQALC-PKGVVFRPLSGAP-GHAELVVAFPGTRPAPAAQHF 284 >UniRef50_B1ZCQ9 Transcriptional regulator, LysR family n=3 Tax=Rhizobiales RepID=B1ZCQ9_METPB Length = 311 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 103/296 (34%), Gaps = 12/296 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M + + R + +A+ + RAA+++ + + I LEE+ G LF R + L Sbjct: 1 MVLMELRHFRYALAVAEELHFTRAAQRLGIAQPALSQQIRQLEEEFGTQLFHRLTRGVEL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP--TIIFDQLISLGDK 117 +AG+ L + + + ++ IG + ++ + D Sbjct: 61 TEAGRALLPYARAALAAADEGTAAVRRAAKGELGQLRIGFTGSASFNPVVSGTIGRFRDA 120 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 Y V E + ++ +L + ++ A E + L LP L + Sbjct: 121 YPEVELDLQEQVTSMLLRSLREGRIQLAFGR----AADDETDGLRRIALPEESLWAALPA 176 Query: 178 RYEE----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 ++ R + L P++ N I A G +P I+ + ++ Sbjct: 177 KHRLAGAGRIDLASLAADPFILYPRANGRLLYDAIVAACGRAGFSPRIVQEAPQMASTVN 236 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V G + ++P RL+ ++ Y + L + TA++ I Sbjct: 237 LVAAGVGVALVPASM-RLLQAPSVSYVELSTPGTVASLSLVQGPDLLMTASVRNFI 291 >UniRef50_Q12DG5 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12DG5_POLSJ Length = 289 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 104/292 (35%), Gaps = 13/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ +A+ + +RAA ++H++ P + IA LE+++G L R + ++L +A Sbjct: 1 MDLRQLSYFVAVAEELSFSRAASRVHISQPPLSRQIAKLEQELGAVLLIRSSHEVALTQA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGID-NTYPTIIFDQLISLGDKYEGV 121 GQ L ++ + + I + + R + + IG +T T + L Y V Sbjct: 61 GQALLEEARRLLALAAGIPEVVGRASRGETGSLRIGFVGSTIYTSVPALLSQYRQIYPHV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + L + ++D I Q V+ L L + + Sbjct: 121 AVSVQQLTVARQTVMLKNSEIDVGIIRQAVTEP-----WLATRSLFKEGFMAALPVHHRL 175 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + + L E ++ + G +P I+ Y + V Sbjct: 176 AGQDRVMLQSLAEDDFVFFSRSEAPAIHEQLRKMCEAAGFSPRIVQEAYPMSTVVGLVAA 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + ++P R + + Y E+ + + T+ + Sbjct: 236 GVGIAIVPESMQR-LQMQNVLYRALRGTRA-KTEFFLAWHVGNTSQTLRGFL 285 >UniRef50_Q7W708 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W708_BORPA Length = 298 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 99/292 (33%), Gaps = 13/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 K+MR F+ +A+ + +RAAE++H++ P + I ALEE++ LF R ISL A Sbjct: 1 MDLKQMRYFVAVAEERSFSRAAERLHISQPPLSQQIKALEEELNAPLFHRLPRGISLTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFD-QLISLGDKYEGV 121 G L + + + E + +G ++ + L + G Sbjct: 61 GAALLKSSRAILANVRLAAQETTQIAAGMLGTVRMGTVSSALAHLVPYILTQVKRSMPGS 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E S + +LD + + + +L ++ V ++ Sbjct: 121 KVELTEMSSREQTLAVLRDELDIGLVHTPI-----DTADLRTRQILREPFYAAVPSQHPL 175 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L ++ + + + G +P I + + V Sbjct: 176 ASREAVPVAELASEEFVFFPRTLASGLFDKMVSLCMNAGFSPKIHHTARHQSTMLQMVAM 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G +T++P R+ + + P Y+ E R + + I Sbjct: 236 GLGVTIVPRSLQRIYK-GSAVFLPLTGTPHYL-ELSLIWRESTANGLVERLI 285 >UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELK2_ACIF5 Length = 308 Score = 266 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 100/298 (33%), Gaps = 19/298 (6%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R FI +A+ + +RAAE++ ++ P + I LEE +G L R + ++L A Sbjct: 3 LELRHLRYFIAVAEDLHFSRAAERLGISQPPLSQQIHTLEEMLGARLLVRTNRRVALTDA 62 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTY--PTIIFDQLISLGDKYEG 120 G+ ++ + ++ + + + R E+ IG+ + + + ++ Sbjct: 63 GEAFLKEARAILVQVDRAVDYVRSVERGEKGELHIGMTRSAMLAKQVPRAIFRFRTEFPS 122 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E + ID L ++ I + L L L ++ ++ Sbjct: 123 VHLGLEELNSLEQIDALIHEKIQVGIMRVQHLPAM-----LQSHMLYADPLVAVLPAKHP 177 Query: 181 ---------ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAK 231 + L ++ G NP I+ Sbjct: 178 FCPISPTLSVPLDPAQLVHEQFIIFADSAGTGIRNQFYQICHDAGFNPRIVQEVQEASTM 237 Query: 232 ISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 I V G +T++P + ++ Y P + R ++ + Q + Sbjct: 238 IGLVAAGLGITILPVSY-SYLQQDSVCYIPLSS-PSARSDIHVVYRCRDHSPLLRQLL 293 >UniRef50_A6VSP2 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSP2_MARMS Length = 296 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 111/297 (37%), Gaps = 11/297 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +K+ FI +A+ + RAA ++H+ P + I A+E++IG LF R +SL A Sbjct: 1 MRFRKLNYFITVAEELHFGRAAARLHIAQPPLSQQIKAIEDEIGAVLFERSSQKVSLTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPT-IIFDQLISLGDKYEGV 121 G+ L + + Q I ++ + S + +G T + GV Sbjct: 61 GEALLPQARALLQDWEKIQEQVRSIANGTSGNLSLGFVWAAGTPHFSKGIAQFKQDNHGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 T E + +D L +++D + + + +LE+ + + + Sbjct: 121 TLNLEEMTTTHALDALRTKKIDLAMIFLNPLMDITDLEHQDYE---TQKHLLALPENHPL 177 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 Q+ L +LP++ Q + I ++ G+ P I+ + V Sbjct: 178 AQKESVPLSDLHQLPFISFVRQAHPSLYDQIMHHLHAAGVEPNIVQIARLTQTTRTLVAA 237 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRD 294 G + ++P + L Y + + + R + T M + IA ++ Sbjct: 238 GVGVALVPES-TQFDRREGLTYRPIDGV-LPELDIHFVWRKNGLTPLMERLIAHLQE 292 >UniRef50_C6CDY7 Transcriptional regulator, LysR family n=10 Tax=Enterobacteriaceae RepID=C6CDY7_DICDC Length = 310 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 104/289 (35%), Gaps = 5/289 (1%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A + RAAE + ++ P + I LE +IG LF R + + +A Sbjct: 1 MELRYLRYFVAVASARHFTRAAENLGISQPPLSQQIQKLEREIGTPLFKRMARGVEMTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGID--NTYPTIIFDQLISLGDKYEG 120 G YQ + + +H+ R + I IG T+ ++ L + Sbjct: 61 GAAFYQDACHILALTDSAIERVHSIARGEAGAINIGFSCAVTFHPMVLSLLQRYRQHFPN 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V P E ++D+L +R +D + + +E L L + Sbjct: 121 VRLNPREEHIQDILDSLRNRTIDIAFIRLPCDLNDEFDGEILTNEAFQLVLPAGHPLSAQ 180 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + L++ P + + +I G P + A I+ V G Sbjct: 181 TCIALDQLKQEPLIIFPRELCPGLYDLIVRTCYLSGYQPKLNPLAPHLTATINMVATGFG 240 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 +T +P + +++ Y D P + R H + T++ I Sbjct: 241 VTFVPQSM-SCIQNSSVSYHD-TTTPHLTTQIAVIWRRHDRSVTLMHMI 287 >UniRef50_D2Q131 Transcriptional regulator, LysR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q131_9ACTO Length = 298 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 103/296 (34%), Gaps = 12/296 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++++F+++A+ N+ RAA ++H+T + IAALE +G LF R L A Sbjct: 1 MELRQLQSFVVVAEELNVGRAATRLHLTQPSLSRQIAALERDLGVELFARIRKRFVLTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 G+ L + +R + + R + + + + +L+ + D + V Sbjct: 61 GESLLADARDLLRRADDAVRDAQRTQRGELGTLRLRFVQSATFEVLPKLLGAFRDSHPQV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVS----ARVQELENLTISELPPLRLGFLVSR 177 + ++ L D ++D + + E L + L ++ Sbjct: 121 VLDLETMTTLRQVEALKDGRIDVGLLRLPEPGTQLGDTKPAEGLASRVVSRDPLVAVLPA 180 Query: 178 RYEER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 ++ L ++ + I R G P+I +S Sbjct: 181 KHPLARRRRIRLAELAAEDFVFYTRPSGPAVHDRIVGYCRDAGFTPSITQAAADVQTIVS 240 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V G ++++ R +P + Y + + E + + + + + Sbjct: 241 LVAAGLGVSLLIAPTPR-TDPEAVVYRELSD-DLPPWELSLAWSPDNRSPVLQRFL 294 >UniRef50_Q1IX51 Transcriptional regulator, LysR family n=3 Tax=Deinococcus RepID=Q1IX51_DEIGD Length = 297 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 98/292 (33%), Gaps = 12/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R+F+ LA+ + RAAE++ + SI LE+++G L R + L A Sbjct: 1 MELRHLRHFVALAEEEHFGRAAERVFVVQQALSNSIKNLEDEVGVPLVLRTTRRVQLTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP-TIIFDQLISLGDKYEGV 121 G+E + + + + R + +G + + + + + D Y V Sbjct: 61 GREFLAGARETLAQAAQMVERARRAARGEVGRLTVGFVSGLAFGGLPEIVRAFRDLYPNV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + L Q+D + V L L L + + Sbjct: 121 SVDLRELTAQEQEAGLRGGQIDVGLMLLPVRDP-----GLDSHPLWRQPLVAALPAGHAL 175 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 +++ L L++ ++ RA + + G P ++ +S V Sbjct: 176 ARKRRLRIGDLRDERFVFFPRHLRATYFDQVMRWCGAAGFTPNVVQEAIEIPTLLSLVAA 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + +P + ++ + Y P+ ++ + + Sbjct: 236 GIGV-FLPIQFFERLSLPGVVYRPLDDAPVIEIVAVWRRDEAEGGPIVRAFL 286 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 101/291 (34%), Gaps = 12/291 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ +A+ ++ +AAE++H+ S + I LEE++G LF +K N+ L Sbjct: 1 MELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQ-LISLGDKYEGV 121 GQ ++ + L EIH EI +G ++ + Q + + + V Sbjct: 61 GQLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + +I ++ ++D E E + L L ++ + Sbjct: 121 KFRFRQGMYPSLIRDMVKGEIDLAFISPFPD----EHEQVCGEVLLTEELFAILPPSHPL 176 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 EQE+ L+E ++ + ++ + G P I + V Sbjct: 177 AGEQEIDLIQLKEDTFVMF--SEGYSLRPIVWEACQEAGFTPKIGFEGEETETIRGLVAA 234 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G ++++P A + + N + Sbjct: 235 GMGVSLLPEMALYHAGVLQSAKVRVRTPNVTRNIGIIHRSNEKMPLVAKVF 285 >UniRef50_B8J696 Transcriptional regulator, LysR family n=3 Tax=Anaeromyxobacter RepID=B8J696_ANAD2 Length = 296 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 95/287 (33%), Gaps = 13/287 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ + RAA ++ + P + I LE ++G LF R + L + Sbjct: 1 MELRHLRYFVAVAEELHFGRAAARLGIAQPPLSQQIRQLERELGVELFLRARRRVELTEP 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G+ L V QR S ++ + R + + +G+ + + ++ ++ V Sbjct: 61 GRVLLGHARAVLQRASQAAEDVRRAARGETGALSVGVVASATYGVVPRVFRTFRARHPDV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 S + L QLD ++ E L + + + + Sbjct: 121 ALGVAVMSTGAQVAALRAGQLDLGLARTPFGD-----ETLVAETVLEEPVVVALPAGHPL 175 Query: 182 RQEQELLQE----LPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + L P++ R + + R G P + ++ V Sbjct: 176 SARRALRLAALAPEPFVLFPRDRRPGWYDFVLGLCREAGFRPRVAEDAPELATAMALVAA 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTAT 284 G +T++P + + + + Y + R + Sbjct: 236 GIGVTLVPASV-KDLRRSGVDYRPIAAPRARTRLVAL-RRPGEPSPL 280 >UniRef50_C0Z7P7 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7P7_BREBN Length = 290 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 108/296 (36%), Gaps = 15/296 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R FI +A+ I AA++++M P + + +EE++G L R I L Sbjct: 1 MDI---RQLRYFIAIAEEGQITGAAKRLNMAQPPLSQQLKQMEEELGTMLVERSGKQIVL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG LY++ + ++ +E+ +G + IG+ + +Q+ KY Sbjct: 58 TEAGITLYKQALNIVHQMEEALSEVKETGEGIRGTLSIGVSALSAYRLPEQIRVFQQKYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 +T + + + L R ++ I L N T+ L +V Sbjct: 118 LITYKIWKGDTQLLNQWLERRTIEVAIVRLP-----HSLNNCTMIPLEEEDFVLIVPATS 172 Query: 180 E----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + E + ELP + +I G+ P +I +S V Sbjct: 173 PYADRKAIEMREIAELPLIM-PSTPGLGIYDLIIKEFSRLGVEPHVICECPDISLIVSMV 231 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 +++P AW ++ +Y ++ R+ + E Sbjct: 232 ASSVGSSIVPISAWETHQSEQIRGIRLSGTSIYSS-AAVVWQSGRHLSKAANRFIE 286 >UniRef50_O68014 HTH-type transcriptional regulator benM n=12 Tax=Acinetobacter RepID=BENM_ACIAD Length = 304 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 87/280 (31%), Gaps = 13/280 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ + + + +AA+K+ + P + I LEE++G L R + Sbjct: 1 MELRHLRYFVAVVEEQSFTKAADKLCIAQPPLSRQIQNLEEELGIQLLERGSRPVKTTPE 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVT 122 G YQ + + + + + I IG + + ++I + + Sbjct: 61 GHFFYQYAIKLLSNVDQMVSMTKRIASVEKTIRIGFVGSLLFGLLPRIIHLYRQAHPNLR 120 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 + E + L + ++D +S + L RL V + Sbjct: 121 IELYEMGTKAQTEALKEGRIDAGFGRLKISDPAIKRTLLR-----NERLMVAVHASHPLN 175 Query: 183 Q------EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 Q L + L + NF + G+ PT I + V Sbjct: 176 QMKDKGVHLNDLIDEKILLYPSSPKPNFSTHVMNIFSDHGLEPTKINEVREVQLALGLVA 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSI 276 G ++++P + L Y Y+ Sbjct: 236 AGEGISLVPASTQS-IQLFNLSYVPLLDPDAITPIYIAVR 274 >UniRef50_C6CYK3 Transcriptional regulator, LysR family n=3 Tax=Bacillales RepID=C6CYK3_PAESJ Length = 296 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 112/295 (37%), Gaps = 10/295 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R F+ +A+ I RAA+ ++M P + + +E+++G LF R ++L Sbjct: 1 MDI---RQLRYFLAIAKEGQITRAAKALNMEQPPLSRQLKLMEDELGVILFDRSGKGLTL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLISLGDKYE 119 AG+ L K + Q + +E+ + IG + +++ + Y Sbjct: 58 THAGELLRDKAEKLLQEFNETMHEVKELDAGLHGMLAIGSVVSCISLLPPPIEQFRRLYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 VT + E + + L R ++ I++ + + ++ LP ++ + Sbjct: 118 NVTFKIWEGDHFILGNLLEKRDIELIVARLPFES-TLHTQPYSVLPLPSDPYVAVLPASW 176 Query: 180 EERQE-----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + L ++P+L ++ + R G P +I S ++ Sbjct: 177 VKGPDKNTMLMSELADMPFLTLKTDKTIGMHHRVMIEARAHGFEPKVICECSSVAIIVAL 236 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V G TV P T+K + + +++ + + I Sbjct: 237 VAAGIGATVFPKSVMASFPLPTIKMLTISDADFQSEVGIIWLKDRYLSKSARNFI 291 >UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=Clostridiales RepID=B8FPA0_DESHD Length = 295 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 104/294 (35%), Gaps = 14/294 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 K + F+ +A+ + ++AAEK H+T S K I LE ++G +LF R + L Sbjct: 1 MEIKHLEYFVEVARQKSFSKAAEKCHVTQSTISKLIKDLEGELGTSLFNRTSKYVQLTDT 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIH-NSGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 G + + + + +E +I IG+ T +F +L+ KY + Sbjct: 61 GAIFLDQALEIVTKFENLTHEFQNRIKLERGKIAIGLLPITGTTLFAELLGEFKKKYPQI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE- 180 E VI ++ D LD + V + + L +VS R Sbjct: 121 EISLSERGSKKVIMDILDGTLDVGVVC-----SVPDSQYFESFAFAEDPLYVIVSVRNPI 175 Query: 181 ---ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + + L + P++ + + I + + G P II+ F V Sbjct: 176 SKLASIDLKSLADEPFVLYSSE--FSLHDEIISKCKNEGFAPNIIFETSQFELMTQMVAA 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 + +P A R ++P + P + + + R + + Sbjct: 234 DLGIAFLPGAACREMDPRRFAVIPVTN-PQIIHQMFIIWKRGRSMSHAANLWLQ 286 >UniRef50_Q632J2 Transcriptional regulator, LysR family n=5 Tax=Bacillales RepID=Q632J2_BACCZ Length = 297 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 110/293 (37%), Gaps = 13/293 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++R FI + + I+ AAE++H++ P + + A+E+++G L R + + Sbjct: 1 MDM---RQLRYFIAIVEERKISAAAERLHISQPPLSQHLKAMEDELGTKLMERNGKFLGV 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG+ LY+ + + E+ G S ++ IGI+ + + D L +Y Sbjct: 58 TEAGKALYKYALQMNHLMEEAKMEVKEVGNGVSGKLTIGINTFSVSGLPDLLHRFHKEYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 VT + + + + + +R ++ I + +L + + L F+ S Sbjct: 118 RVTYKVHQNESSHLCQLVRERVIEMAIIRLPL-----DLNDFSAIHLYTEPFYFITSNEK 172 Query: 180 EE---RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + + +Q P + MI ++P II + V Sbjct: 173 QLFNHQVTLADIQNHPLIL-PSTEGLGVHYMILEAFSKAQLHPNIIAECSDISLLLDLVA 231 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 ++P ++ F + L ++NH + I Sbjct: 232 CNFGAAIVPETVINQYQNYNIQAFKITDTDLIASTSLIWLKNHYLSKAAQNFI 284 >UniRef50_A1W235 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A1W235_ACISJ Length = 309 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 104/300 (34%), Gaps = 11/300 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ LA+T N RAAE++HM P SI LEE++G LF R + L A Sbjct: 1 MNLRQLSQFVALAETGNFHRAAERLHMAQPPLSVSIRKLEEELGSPLFERTTTGVVLTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 G+ + + ++ + +GI + + QLI SL +Y + Sbjct: 61 GEAMLGDARRALFHAQQCRQAVQDAREGEGGLLRLGIIGSATYALLPQLIPSLRQRYPQI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + + +++ L R+ D + V + L V+ Sbjct: 121 ELELSEATSSEILEGLVSRRFDAGLLRYPVLDPS----GFELLPLDRDDFVLAVAESSPL 176 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 Q P++ + A+ + G +P + +S V Sbjct: 177 AQRDAIALAEAAHEPFIMYPQHKVPSLSALAMMRCQFSGFSPRVAQEAMQVQTIMSLVAS 236 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 G + ++ R V P +K P + R T+ +++ E + Sbjct: 237 GLGVGLV-ASVARQVVPRGVKCLALTDNPPGFHVGIALARLASGTSRVVERFTEHALRFA 295 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 262 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 105/298 (35%), Gaps = 17/298 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++++ F+ +A+ ++ +AAE++H+ S + I LE+++G LF +K N+ L Sbjct: 1 MELRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAV 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 GQ ++ + + L +E+H EI +G N+ + +++ Y V Sbjct: 61 GQLFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + + +I ++ ++D Q N+ ++ L ++ + Sbjct: 121 KFRFRQGTYPTLIRDVVSGEVDLAFISPFPENHDQVTGNVVLT----EDLVAILPPGHPL 176 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + L++ ++ + ++ G P I + V Sbjct: 177 AGEQSIKLSQLKDEKFILF--SKGYSLRPIVWHACLEAGFTPKIAFEGEETDTIRGLVAA 234 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ----HIAE 291 G ++++P A P + R + Q + E Sbjct: 235 GMGVSLLPEMALFQSFTLQPIRVRISE-PKVTRTIGLIHRVDEKLPLVAQSFRMFLLE 291 >UniRef50_B4SNU6 Transcriptional regulator, LysR family n=1 Tax=Stenotrophomonas maltophilia R551-3 RepID=B4SNU6_STRM5 Length = 310 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 104/278 (37%), Gaps = 11/278 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F++ AQ + +AAE +H+ P G+ I ALEE+IG LF R+ I L+ A Sbjct: 1 MELRHLRYFVMTAQLQSFTKAAEALHIAQPPLGQQIRALEEEIGTPLFHRQGRGIVLSDA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPT--IIFDQLISLGDKYEG 120 G+ + + R+ + ++ R + +G+ + + L + Sbjct: 61 GRVFWAAAVDILARVDHAKEQALSAARGEVGTLTLGLTESASYNDAVTALLRRFRQAHPA 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V Q VE +I L D +LD +I S + L I +L L ++ + Sbjct: 121 VQLQLVEDGSESLIRRLDDGELDAVIVRPPYSHPGE----LVIQQLSAEPLVAVLPAEHP 176 Query: 181 ERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 L++ ++ ++ A + A R G PTI + I+ Sbjct: 177 LAGRAGIALTELRDERFILFSRKSGYGLSADVVAACRSQGFTPTIQQEAPQVASAINLAA 236 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLY 274 G + ++P L P P+ + Sbjct: 237 AGLGIAIVPASMQTLHRPGLAFVALELGMPITALQLAM 274 >UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax=Proteobacteria RepID=A0AYH9_BURCH Length = 326 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 92/272 (33%), Gaps = 4/272 (1%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ N RAAE++H+ P + I LEE +G LF R + L A Sbjct: 22 MELRHLRYFVAVAEERNFTRAAERLHIAQPPLSRQIQQLEEALGVPLFERTARPLKLTDA 81 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFD-QLISLGDKYEGVT 122 G+ Y + + + +++ G+ R + +G + + + +Y V Sbjct: 82 GRFFYSHAVQLLAQTTELESMTKRVGKIERSMSVGFVGSTLYGMLPKIIRRFRSEYPAVE 141 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISE-LPPLRLGFLVSRRYEE 181 E S I L + ++D L + L +G ++ Sbjct: 142 LSLHEMSTMDQIKALKEGRIDVGFGRIRHEDPSVRRVVLREERMIVALPVGHVLDSAKPV 201 Query: 182 RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 L + R ++ + A + P IY + V G + Sbjct: 202 -LSLHDLVNDTLIIFPKAPRPSYADQVLAAFHDRALQPRRIYETRELQIALGLVAMGEGV 260 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYL 273 +V+P + L + Y + + Sbjct: 261 SVVPQSVYGLKRDD-ISYKPLDDPNLVSPIIM 291 >UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax=Bacillales RepID=GLTC_BACSU Length = 300 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 103/291 (35%), Gaps = 12/291 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ +A+ +++ AA+ +H+ S + IA LEE++ TLF R+ NI L Sbjct: 1 MELRQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFEREGRNIKLTPI 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 G+E + + + +I + IG + + + +I + ++Y V Sbjct: 61 GKEFLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTSLASQLLPTVISAFKEEYPHV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + S +I+ + +R +D + + ++T L ++ LV + Sbjct: 121 EFLLRQGSYKFLIEAVRNRDIDLALLGPVPT----NFSDITGKILFTEKIYALVPLNHPL 176 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 ++ L+ ++ M + G P + A V Sbjct: 177 AKQKTVHLIDLRNDQFVLFP--EGFVLREMAIDTCKQAGFAPLVSTEGEDLDAIKGLVSA 234 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G +T++P + P + + +N + Sbjct: 235 GMGVTLLPESTFAETTPRFTVKIPIEFPQVKRTVGIIKPKNRELAPSANDF 285 >UniRef50_A9HZJ0 Transcriptional regulator, LysR-family n=2 Tax=Burkholderiales RepID=A9HZJ0_BORPD Length = 297 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 102/293 (34%), Gaps = 12/293 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ +A+ + + AA ++H++ P I ALEE++G L R + + L +A Sbjct: 1 MDFRQLRYFVAVAEELSFSGAARRLHVSQPPLSLQIKALEEELGSVLLNRNNRKVELTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTI--IFDQLISLGDKYEG 120 G ++ L + + + R + E+ + + P + + ++ G Sbjct: 61 GTLFLEQARRALAYLERAGDVVRQAARGEAGELRVSFTASVPMFEAFPQIVQAFRARHPG 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 A + S + L D+ +D S + N+ +++L RL ++ + Sbjct: 121 ARADLIHLSTGQQLRALADKSVDIGFLR--PSPLFEPPANIAVAQLWTDRLVAVLPAGHA 178 Query: 181 ERQEQ-----ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + L + ++ + G P + I V Sbjct: 179 LARRPGPLPMAALADESFILFPRGLGCGLFEHVTVLASRAGFAPHVRQEAREGATIIGLV 238 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G ++V+P + P + Y R + + R + + Sbjct: 239 AAGMGISVLPDTYMKTGIP-GVTYCALDTRDAASRVL-LAYRADDAAPLLRRF 289 >UniRef50_Q47141 Hca operon transcriptional activator n=46 Tax=Gammaproteobacteria RepID=HCAR_ECOLI Length = 296 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 102/299 (34%), Gaps = 12/299 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +AQ N RAAEK+H + I LE +G L R ++L A Sbjct: 1 MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQ-LISLGDKYEGVT 122 G+ Q + ++ + R++ IG + + + L + Sbjct: 61 GECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDTL 120 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 + V + + +LD + V + + EL L ++ + Sbjct: 121 IELVSLITTQQEEKIRRGELDVGLMRHPVYSPEID-----YLELFDEPLVVVLPVDHPLA 175 Query: 183 QEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 E+E+ L + ++ + ++ A P I+ + + ++ V G Sbjct: 176 HEKEITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMG 235 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 +T+IP + N + + + L + + + IA ++ + Sbjct: 236 LGVTLIPGYM-NNFNTGQVVFRPIAGN-VPSIALLMAWKKGEMKPALRDFIAIVQERLA 292 >UniRef50_A3VLP1 LysR family transcriptional regulatory protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLP1_9RHOB Length = 325 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 100/296 (33%), Gaps = 13/296 (4%) Query: 5 ISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAG 64 +++R F+ +A+ N RAAE++ + P + I +LE Q+G LF R + L G Sbjct: 11 ELRQLRYFLAVAEELNFTRAAERMGIAQPPLSQQIISLEHQLGAKLFIRSCRRVKLTAEG 70 Query: 65 QELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIG-IDNTYPTIIFDQLISLGDKYEGVT 122 EL + I + +I +G + + +++ L + GV Sbjct: 71 IELQAYARRIINTTMLATESIRSIANGKNGQIALGSVCSAIHSLVPHILPPFAALHPGVR 130 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 E + L + ++D I + ++ L V+R Sbjct: 131 VHLQEMTVKEQFRALNEERIDIAIVREPMA-----TTEFATQPLFTEPFVAAVNRNSPLA 185 Query: 183 Q----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + E + P +Q+ + + + + G ++ + + V G Sbjct: 186 RMNRLSLEQIAREPLVQVYRSANREYSDHMFSALMEQGYELNVVCEASDMHSLLGLVASG 245 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRD 294 ++++P + A + Y + + T +M Q + D Sbjct: 246 IGVSLVPASLVN-IQTANVIYVPLSD-DVQSSTLSLAWNPEALTPSMDQFLKSVSD 299 >UniRef50_C2FUK4 Transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2FUK4_9SPHI Length = 300 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 105/289 (36%), Gaps = 10/289 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + + F +LA+ + +AAE++ ++ P + I LEE++ LF R + ++L A Sbjct: 1 MELRHLHYFAILAEELHFGKAAERLFISQPPLSRQIKDLEEELAVILFERNNKRVNLTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLISL-GDKYEGV 121 G ++ + + L + S +G ++ P + +L+ + ++Y + Sbjct: 61 GAYFLKETQDILRLLDNAKIKARQIQDAVSGTFRLGYISSTPKALLARLLKMVKERYPHL 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E S + L + +LD I + + L L + + Sbjct: 121 HVCLYETSTQKQLTALENGKLDLGIVRTPILSN-----QLCTRTLLKESFCLATTPDFNA 175 Query: 182 RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 + L EL ++ + + + G +P +++ + + + V G Sbjct: 176 NSGK--LSELAYVTYSKEYAPEYYRQFVSYCHYLGFDPHVLHECNTMQSILELVASGLGA 233 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 ++P + + P P+Y + L R R+ + A Sbjct: 234 ALVPQSVQNQALHLQICFSALPAVPIYTETVLAFDRESRH-PALSAFTA 281 >UniRef50_Q28M96 Transcriptional regulator, LysR family n=3 Tax=Rhodobacteraceae RepID=Q28M96_JANSC Length = 297 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 43/298 (14%), Positives = 95/298 (31%), Gaps = 9/298 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ A+ + RAA+++ + ++I ALE ++ LF R + ++ + A Sbjct: 3 SDLRQIRYFVATAEELHFRRAADRLGIAQPALSRAIQALEAELDVALFVRTNRSVQITTA 62 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDN-TYPTIIFDQLISLGDKYEGV 121 G+ + + E + + IG + + L +++ V Sbjct: 63 GRVFLDGAREILTLTERMLEETRTAHDGRMGALRIGYTDFAIAGELPSLLKHFQERHPRV 122 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 T +P I L + +LD + + + L S + Sbjct: 123 TLKPQHGVTQTQIRLLEEGKLDLGFVTGPIVRDGFDQRVVQSEALQA---VVPDSHPFAG 179 Query: 182 RQ--EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 R L E ++ ++ +F + R G +P I+ ++ + V G Sbjct: 180 RATLSIADLAEEDFVHGSSRDWQHFYDYLLPMCRRAGFSPRIVQEAFNTAGILGLVSCGM 239 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 +TV+ + P L R + + + Sbjct: 240 GVTVLTERVCSALGP-GLVAIPITDAD-ERLVTSAIWRKDHLSGPARHFVEDLCARPP 295 >UniRef50_D2P368 Transcription activator of glutamate synthase operon GltC n=18 Tax=Listeria RepID=D2P368_LISMO Length = 295 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 104/297 (35%), Gaps = 15/297 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++++ F+ +A+ ++ +A+E +H+ S + I LEE++G LF R N+ L Sbjct: 1 MELRQLKYFMEVARVEHMTKASENLHVAQSAVSRQITKLEEELGVHLFDRVGRNMQLTSV 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 GQ+ ++ L + + + + +G+ N+ T + +IS +KY + Sbjct: 61 GQDFLKQAAIALNELQKAEALVTEYTDPAKGTVRVGLPNSLSTKVLPSVISTFREKYPQI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 T Q +E + + + L LD + E + +L +V + + Sbjct: 121 TYQFMEGTNEELTEMLLSGVLDMTFLSPVPES----SEQIEAIRFFDEKLKLIVPKTHPL 176 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + L ++ + ++ G P I ++ F V Sbjct: 177 AENFTVSLKELASEKFVLYP--EDFDLYKIVTKAANKKGFEPQIAFQSRDFYTIQGLVGA 234 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTA---TMLQHIAE 291 G ++++P K + + + + + + I Sbjct: 235 GLGISILPEMILDGAIFKETKSIALRDKELRRSVGIITTKKRNLSPSENLFRSFIIS 291 >UniRef50_B9X9V4 Transcriptional regulator, LysR family n=1 Tax=bacterium Ellin514 RepID=B9X9V4_9BACT Length = 296 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 106/292 (36%), Gaps = 11/292 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ +A+ + +RAA+++H++ P K I LE+++G LF R ++ +A Sbjct: 1 MQFRQIECFLAVAEELHFSRAAKRLHLSQPPLSKHIRQLEQELGVQLFIRNRRSVVQTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTY-PTIIFDQLISLGDKYEGV 121 G+ +K+ V +L + ++ E+ IG + I L+ ++ V Sbjct: 61 GRIYQEKVRNVLYQLEEAKLAAQRAQAGQTGELKIGFLSALFYDFIPPLLMRFRRRFPDV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 +E + + D ++D E ++ L + + Sbjct: 121 QVTLLEMVAAKQFEAVSDGKVDVAFPGLPPDKPGLE---ISSRILRKDKWYACFHSEHPL 177 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 Q+ E ++ ++ ++ + + R P + + +S + Sbjct: 178 AQQEKVWLEEVRRESFVFIQRAVSPALDDALLEMFRQVNYTPRVAQTASRAQSLLSLIAA 237 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G +++ P A + A L + + + + + + + + Sbjct: 238 GVGISIFPG-AVSALPSAGLVFRPLKDKLAPYEHSII-WNGSNTSPVLAEFL 287 >UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRZ3_ACIBL Length = 296 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 109/299 (36%), Gaps = 15/299 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++R F +A+ RA+E H+ + I LE ++G LF R + L Sbjct: 1 MEVHQLRYFCAVARHGTFTRASEVEHVAQPSLSQQILKLEAELGARLFDRLPRSAKLTVF 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G+ + ++L E+ + E+ +GI T + +L++ L ++ V Sbjct: 61 GKAFLPNAERILRQLDEAKTELLEMTSNEKGEVTVGIIPTIAAYLLPKLLNGLSVRHPDV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 T + E ++ L D +D I+ + L EL + ++ ++ Sbjct: 121 TVKISEDITPVLLQRLHDGSIDMAIAALPIPG-----TELASEELFEEKFYAVLPEKHRR 175 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L P+L + + F + A ++P++++ F ++ V Sbjct: 176 ASRASISLADLNREPFLLL--KEGHCFRDSVIAACNQAAMSPSVVFESGQFATILAMVSA 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGT 296 G ++ +P A + K+ + + + + R+H + + RD Sbjct: 234 GMGVSAVPAMAVQ--PHPGCKFIPISGKHSSRKVGIVTSRHHFQGRAQRLLLKQMRDAC 290 >UniRef50_B8IDW8 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IDW8_METNO Length = 305 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 108/297 (36%), Gaps = 5/297 (1%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F +LA+ + RAA ++ ++ P +I LEE++G TLFTR ++L A Sbjct: 1 MDLRQLRYFAVLAEERHFGRAARRLSLSQPPLSHAIRQLEEELGATLFTRTSRQVALTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGID-NTYPTIIFDQLISLGDKYEGV 121 G L ++ + QR + +H+ R + IG +T + L ++ + + Sbjct: 61 GTALQREAKAILQRAADARVLVHDIACGRRGRLRIGFSGSTVYRGLSHILTAMRTEAPDI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPP-LRLGFLVSR-RY 179 E + ++ L +LD + L +G ++ Sbjct: 121 KVALREMNSAEQVEALLHDELDAGFVHLRERPEGLDGILFHAEPFVTCLPVGHPMAATPD 180 Query: 180 EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 LQ ++ ++ I A R G P + + ++ + V G Sbjct: 181 PSETRLIDLQHEDFVLFSRTVSPDYYESILAICRTAGFLPRVRHEVRHWLTVAALVAHGA 240 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGT 296 + ++P A A + + P P+ + + + + + + R Sbjct: 241 GVALVPQ-ALAGSQLAGVVFLPIPPSPIQSETWCVWKASAPAPGILETFLPQVRAAM 296 >UniRef50_B2I0S1 Transcriptional regulator n=12 Tax=Acinetobacter RepID=B2I0S1_ACIBC Length = 306 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 112/304 (36%), Gaps = 15/304 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ N +AA++++M+ P I LEE++G LF R + + L +A Sbjct: 1 MELRHIRYFLAVAEEKNFTKAAQRLNMSQPPLSMQIRDLEEELGADLFIRSPHGVELTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNT--YPTIIFDQLISLGDKYEG 120 G + PV QR+ N + ++ +G T +I + +Y Sbjct: 61 GLAFLNAIQPVQQRVEDAANLVKQVANGEVGQLRLGFTGTSMLNPLIPKCVRYFQQQYPK 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR--- 177 V + E + +ID L + +LD I + ++L + EL L + Sbjct: 121 VNLKLEEANTLLLIDLLLEDRLDVAIIRSPRNMP----DSLILQELLAEPLIAALPSESF 176 Query: 178 ---RYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + L+EL ++ A I G P I ++ +S Sbjct: 177 NLDDVSQEIDLTALRELDFIVSPPSVSAGLFDAIKQACHEHGFEPKIGQNAPQIVSILSL 236 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRD 294 V ++++P + + + Y P+ + + H + + + + Sbjct: 237 VSANLGVSLVPES-TKQLQIQGVAYRSLKA-PVPKVGLGLAYKKHAPSQMAINFASVVQV 294 Query: 295 GTSH 298 H Sbjct: 295 ACHH 298 >UniRef50_B0C1S6 Transcriptional regulator, LysR family n=2 Tax=Cyanobacteria RepID=B0C1S6_ACAM1 Length = 298 Score = 259 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 98/292 (33%), Gaps = 13/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++++F++LA+ + RAA+++ +T K I LE+ +G LF R ++L A Sbjct: 5 IEFRQLQSFVVLAEELHFGRAADRLDITQPALSKQILVLEKAVGVQLFFRTKRTVTLTHA 64 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 GQ + + + +G ++ IG T + QL+ +Y V Sbjct: 65 GQTFLHQARQLLLQRDQAILLTRRTGDGEIGQLSIGFTKTATQTVLPQLLRQFVQRYPEV 124 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE- 180 E + + L +D + + L + + ++ ++ Sbjct: 125 DLDLRELATEAQVTALNQDNIDVAFLHPPI-----DQRGLQLQIILAESFVAVLPPQHPF 179 Query: 181 ---ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + E P + + + G P II + ++ V Sbjct: 180 VHLDAIPLEAFANEPLIVHPRREGPILYDGFQQVCQRAGFQPNIIKESITLQTRLCLVAA 239 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G +T + LV + P+ ++ + R + + + Sbjct: 240 GLGITFVSDRLQALVGT-NVVCRPIQDCPIQLEFGA-AWRQNAANPVLQNFL 289 >UniRef50_B7H3Y5 HTH-type transcriptional regulator alsR (Als operon regulatoryprotein) n=12 Tax=Acinetobacter RepID=B7H3Y5_ACIB3 Length = 300 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 104/294 (35%), Gaps = 12/294 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + K+ F+++ + NI AA ++ + P + + LE+++G L R+ I + Sbjct: 1 MLDLYKLHAFVVVVEERNITHAANRLFIQQPPLTRLLKKLEQELGTQLLIRQPRGIEPTE 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP--TIIFDQLISLGDKYE 119 AG L+++ + + I + + + + ++ IG ++ +I L S + Y Sbjct: 61 AGLALFKEAQLLLEHARHIPKLVQDVSQGKTGQLNIGFTSSAGLHPLISLVLRSYREMYP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V + E +D L +LD +S + L + + + + Sbjct: 121 AVQTKLEEAGSQKQLDWLISEKLDIAFLRAPISRDI----GLKHLHILDEPMVVALPIGH 176 Query: 180 EER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 L E ++ R + I + G +P II A ++ V Sbjct: 177 PLTQKKKISLSNLSEENFVLYRRSSGQGLYDNILYSCYQAGFSPRIIQEAPRPTATLNLV 236 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G ++++P + + Y + R + +A + I Sbjct: 237 AAGIGISIVPASMHNFWDHE-IVYREFDDSIKLNAPIYLITRENENSAKVSNFI 289 >UniRef50_C7JCS7 Transcriptional regulator LysR n=11 Tax=Proteobacteria RepID=C7JCS7_ACEP3 Length = 313 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 103/300 (34%), Gaps = 13/300 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ +I AAE + + P + I LE +G TLF R+ + L + Sbjct: 1 MDIRHLRYFVTVAEHGSITHAAEALGIEQPPLSQQIRQLERNLGVTLFERQTRGMKLTEI 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP--TIIFDQLISLGDKYEG 120 G+ L + + + + R I +G+ P +I + + Sbjct: 61 GEVLLPRARTILDLQAQFLSTAEGLARGERGHIRVGLAGAVPLLPVIPLTIRRFREMAPD 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 VT E + + L + +D I + L++ L + R + Sbjct: 121 VTLSLEESNTPALCAALHEPSVDIAIIRPPFTDPS----RLSVFHLLDEPTVIALPRGHR 176 Query: 181 ER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 +++ + P + + F I + + G+ PT+ + + V Sbjct: 177 LAKEPIISLDMVADDPLIIFPRELGPGFHDAILSAYQLAGVTPTMGQQAPQIAGTVPLVA 236 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGT 296 G ++V+P ++ F A P +IR + + + + R Sbjct: 237 AGLGVSVVPRSLSQIHAGG--VTFHAISEPAPRATLAVAIRTGQNMPLVTRFVTVLRTAC 294 >UniRef50_A0KPM6 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A0KPM6_AERHH Length = 297 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 107/298 (35%), Gaps = 16/298 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + +R F+ L + + RA+EK+ +T K I +EE++G L +R +L Sbjct: 1 MDI---RALRYFVELVREQSFTRASEKLFVTQPTISKMIRNMEEELGQPLLSRAGRRFTL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLISLGDKYE 119 +G+ L+ + + + ++ E+ + + +GI + D + + +Y Sbjct: 58 TDSGRVLFNRAQTILAEMQQLEAELADLQSLQFGRLALGIPPMVGHVYADLIRAYRSRYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V VE+ + + + +LD I+ +E L+ EL + ++ Sbjct: 118 KVELSIVEYGGRRIEQAVLEGELDLAITMLP----TKEGGALSALELDQYPIQVVLPDLP 173 Query: 180 EER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 R E L + P+L ++ R G P + R + + V Sbjct: 174 RWRDCPEIRLEALCDEPFLLY--TQAFTLSERLEQACRVAGFEPQVAARSSQWDFLTAMV 231 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 G + +P R + P L P + RY + + Sbjct: 232 RSGMGVAFLPEPICRRLAPDGLVLRPL--VPELSWRLGVIWPSERYLSRTAEAWLALC 287 >UniRef50_B1K332 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=B1K332_BURCC Length = 302 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 100/292 (34%), Gaps = 12/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ +A RAA ++H+ P + I LE ++G+ LF R+ L Sbjct: 1 MELRQLRYFLAVADEGQFTRAAARLHIQQPPLSQQIQELEHELGFALFVRQPRGAVLTAP 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP--TIIFDQLISLGDKYEG 120 G+ + V L+ + + + + ++ + + + D Y G Sbjct: 61 GEIFAARARTVLLELNNAVVHARRVAQGRIGTVRVALTSSAAFHPLTPTAIRNFRDMYPG 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 ++ + E + +I+ + + + D I + V +L L R+ ++ + Sbjct: 121 ISIEMSEVNAAEIIEMMLNGRADAAILRKPVET----SADLRFELLAEERMLLVLPVGHR 176 Query: 181 E----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + L ++ +R A + G P ++ + I+ V Sbjct: 177 LIGGRSVSLKQLANESFIFVRRPGAPGMYADFIRACQAKGFEPHVVEEVPRMVTAINLVA 236 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G ++++P R +++Y + R+ Sbjct: 237 AGGGVSLVPASMQR-YRQESVRYCRVAGDHAFRAPLHLVTRHDLQNPAASHF 287 >UniRef50_Q1IBR2 Putative transcriptional regulator, LysR family n=1 Tax=Pseudomonas entomophila L48 RepID=Q1IBR2_PSEE4 Length = 293 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 99/291 (34%), Gaps = 4/291 (1%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++ +R F+ +A+ + RAAE++HM P ++IA LE+++G+ LF R + L Sbjct: 1 MIETRLLRQFVAVAEELHFHRAAERLHMAQPPLSQAIARLEQRLGFILFQRHSRGVRLTP 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP-TIIFDQLISLGDKYEG 120 AG +L Q L + + + IG + D L ++ Sbjct: 61 AGTQLLDTARATLQGLELGVQQARRIAQGQAGALRIGSLALAGHPPLLDGLKRFRQQWPD 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V + S + L D QLD + + ++ E L L R Sbjct: 121 VELSLQQASSAQLARMLLDEQLDLAVLRDVPELDERLQRHMWHEEPLLLALPADHPRADA 180 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + P++ + + + G +P I+ S V G Sbjct: 181 SSVALADFADEPFVFTPRSLGSRYHQHLLELCLDAGFSPRIVQEAAQLQTVASLVACGFG 240 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 + ++P A + + + Y + R + Q + E Sbjct: 241 VALLPESAALANVQPGVCFRPLRDVAAPLPLY-LAWRAGDGS-LARQRLLE 289 >UniRef50_C4K9T0 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4K9T0_THASP Length = 309 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 101/294 (34%), Gaps = 12/294 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + + +R FI +A+ N RAA ++H+ P I LEE+IG LF R ++L+ Sbjct: 1 MMELRHLRYFIAVAEELNFTRAATRLHIGQPPLSMQIRDLEEEIGVRLFERGPRRVALST 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTY--PTIIFDQLISLGDKYE 119 AG+ + + E + R E+ +G ++ ++ D L + ++ Sbjct: 61 AGERFLLHARRILDGVEEAVAEARRAARGELGELRVGFTSSLPFTDLLPDALNAYRRRFP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V Q E L +LD + + E+ L +V+ + Sbjct: 121 QVRLQLREMFTPEQFQALVSGELDVGFVRLQAGTPP---AGIVLREVARNPLRLVVNAAH 177 Query: 180 EERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 L ++ + ++ A R G P I+ +I V Sbjct: 178 RLAGAAQVHLAELAGEDFISFPADVGTDLPGVLRALCRQAGFEPRIVQTAREATTQIGLV 237 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + V+P V A ++Y + +IR T+ + Sbjct: 238 AAGLGVAVLPAP-LESVRIARVRYLALAEPEAQFR-LALAIREGEPVPTLGGFL 289 >UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=Actinomycetales RepID=A0QTM3_MYCS2 Length = 304 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 101/300 (33%), Gaps = 13/300 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F + + + RAAE++HM P + I LE ++G TL TR ++ L A Sbjct: 1 MELRHLRYFRAVGEELHFGRAAERLHMAQPPLSQQIRQLERELGCTLLTRTTRSVELTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQL-ISLGDKYEGV 121 G ++ + + A + E I IG + + QL +LG+ G+ Sbjct: 61 GHTYLRRAVEILDAVDAANTEAQRIASGIQGRIAIGCVGSATYSLLPQLVRALGESLPGI 120 Query: 122 TAQPV-EFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 E I+ L +D + V E + + L + + Sbjct: 121 EVTVRGEMLAPAQIEALLSGGIDLALLRPPVR-----QEAVLTHTVRRDGLVVALPADHA 175 Query: 181 ERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 L++ ++ R+ ++ G P I ++ V Sbjct: 176 LAIRDAVTVADLRDEDFVVHTGHGRSVMSNLVATVCADAGFLPRIRQEVSETSTLVTLVA 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGT 296 G + ++P ++ A ++Y + + + +L+ + +G Sbjct: 236 AGLGVAIVPDPTT-ALDIAGVRYVPLRPTDLGVDLVAAHTGDSPLITNVLRVLRTLTEGP 294 >UniRef50_Q5FRA7 Putative transcriptional regulator n=1 Tax=Gluconobacter oxydans RepID=Q5FRA7_GLUOX Length = 308 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 111/297 (37%), Gaps = 15/297 (5%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + + + I +A+ N+ RAAE++ + P + + +E+++G LF R + L Sbjct: 1 MIELRHLHAVIAIAEERNLTRAAERLGIQQPPLTRLLKGMEQELGVQLFERHARGMRLTP 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTY--PTIIFDQLISLGDKYE 119 AG+ + + + V +R+ ++ R + E+ IG N+ + D L + + Sbjct: 61 AGRSMLKGAYDVIERMDETVEDVRRIVRGEAGELSIGFTNSALCHPSLPDMLGQFRETWP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V E + + ++ L + +D + + ++ + + + V R + Sbjct: 121 DVGLTLTEGNSSQLLGALREDTVDVAFVRTSIPY----VSDVVVELIVEEPMVVAVPRTH 176 Query: 180 EERQE-------QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 +E L++ ++ + Q I G P I + +A + Sbjct: 177 RLAKEAPAGGLKLAELEDEDFILYQSQYNNGLYKTIVDACLGAGFTPRIRQKGPQLLAAL 236 Query: 233 SAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + V G ++++P + + + Y R R+ R T L I Sbjct: 237 NLVAGGLGISLVPQSMQQH-HAGQVVYIPLSSRTALTAPLYLVFRSVRMTGAKLYFI 292 >UniRef50_A9BVL3 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=A9BVL3_DELAS Length = 299 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 106/299 (35%), Gaps = 13/299 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F++LA+ + +RAA+++ ++ P +I LEE++G LF R + L A Sbjct: 1 MELRQLRYFLVLAEELHFSRAAQRLSISQPPLSVAIRQLEEELGAQLFERTSKEVRLTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNT-YPTIIFDQLISLGDKYEGV 121 G+ L + + ++ + ++ I +G + + + L S ++ V Sbjct: 61 GKHLRVQAQDIMEQAQRVRQDMRAIADGVQGRIRLGFVGSAIYRGLPEALESFRARHPLV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 +E + I L +LD + A L L + + Sbjct: 121 RIDMLELNSAEQIAGLQQERLDLGLLHATRPAP-----GLQSHTLVSEPFMACLPAGHAL 175 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 ++ L L + Q ++ I + G P + + +++ +S V Sbjct: 176 AGQRTLQVRQLAGERMVLFSRQVSPDYHQQIWQICQSEGFTPDLHHEVRHWLSVLSMVSL 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGT 296 ++++P + V L + R Q + +A RD Sbjct: 236 DQGVSLVP-SCLQRVGFPGLAFVPIQGRHPQSQMQAM-WHPGHVQPLVESLLAHLRDSV 292 >UniRef50_C4WNV4 Probable cat1 operon transcriptional activator n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WNV4_9RHIZ Length = 309 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 56/307 (18%), Positives = 112/307 (36%), Gaps = 18/307 (5%) Query: 1 MD---IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNN 57 MD + +R F+ +A N AA+++ ++ P I LE ++G LF R Sbjct: 1 MDGGETMELRHLRYFLAVADALNFTTAAQRLGISQPPLSHQIKLLEIELGVDLFERSSRR 60 Query: 58 ISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP-TIIFDQLISLG 115 ++L KAG+ ++ + +++ + G+ S + IG+ + + + Sbjct: 61 VTLTKAGEVFRRRALSILEQVKMASEHARSIGQGNSGVLNIGLTGSILIGHFAHIMNTFC 120 Query: 116 DKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLV 175 +Y V + E S I L + + I E +LT+ P ++ ++ Sbjct: 121 AQYPDVEVRTHEMSPGEQIIALKAGRTELSILRSPP-----EDSDLTLELAWPEKIVVVL 175 Query: 176 SRRYEER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAK 231 S + E L ++ +R + + F + G P+I + + Sbjct: 176 SADHRLAHHESIRLEWLNNEKYVSLRLAD-SRFANYLLNACIANGFVPSITQQVVESYSL 234 Query: 232 ISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 +S V G + + P +L P + Y H P+ Y S+ + Sbjct: 235 LSLVAAGFGVALAPESVSQLSRP-NVIYRTLQHPPLVADVYAVSLSTDN--PVTQNFLNV 291 Query: 292 DRDGTSH 298 T+H Sbjct: 292 LLHQTNH 298 >UniRef50_UPI0001C42298 LysR family transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42298 Length = 291 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 106/295 (35%), Gaps = 14/295 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MD+ +++R F+ + I AA+K++M P +SI +E +IG L R + + Sbjct: 1 MDM---RQLRYFVTVVDEGQITLAAQKLNMAQPPLSQSIKKMEHEIGAKLLVRHGRKLEV 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG+ LY K + + +G + +G T + +++ + Y Sbjct: 58 TEAGEVLYSKGLQLLNTFDETLGAVRETGEGMRGTLSLGCVMTCIHQLPERVQTFHRLYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V + + + + + + R ++ I + +N+ + E+ F+V + + Sbjct: 118 QVKLKILGGDPHQLSELVESRDIELAIVRSPL-----HYKNVNMIEIANDPFVFIVPKSW 172 Query: 180 EERQEQE-----LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + E P + + N +I R GI P I +S Sbjct: 173 TDVSSLSSITMNQISEYPLIALHRVNGIGIYEIILDEFRRHGIKPKYICESPDATILLSI 232 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V+ G ++P A L Q + ++ + + I Sbjct: 233 VKAGIGAILLPESALFNFTSKDLATIKIDDFSATTQTCVIWQKDRYISKAARKFI 287 >UniRef50_A7IQF8 Transcriptional regulator, LysR family n=12 Tax=Bacteria RepID=A7IQF8_XANP2 Length = 375 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 102/298 (34%), Gaps = 10/298 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 K++ F+ +A+ N RAA ++++ P + IA LE+ +G LF R + I L +A Sbjct: 61 MDFKRLGYFLAVAEELNFGRAAARLNIAQPPLSRQIAQLEQDLGADLFDRSRSQIRLTQA 120 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 G+ + ++ + + E+ G + I + T + ++I + + V Sbjct: 121 GELMLERTREILALAERTEQEVRRVGEGRAGRLRIAFEGTATYGVLPKIIQAYRTAHPDV 180 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 S + L R++D ++ + L + L + + E Sbjct: 181 ELALCTMSHAELKRALIQREIDIAVAR-----PKLDDAELKSEIIAQEELILALPDKGEG 235 Query: 182 RQ-EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 L+ ++ Q R F ++ R G P + I+ + G Sbjct: 236 SILRLSDLKAETFVLYPRQPRPGFCDLVLDVCRQEGFTPEDQVFTQDYQTAITLISIGTG 295 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH 298 ++++P P E + R + +A R +H Sbjct: 296 ISLVPASVAESSRAGVRFARYEGFNPGT--ELSLNYRRDNQMPHLFNFVALSRKIATH 351 >UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=Actinomycetales RepID=C7PVI0_CATAD Length = 297 Score = 257 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 101/288 (35%), Gaps = 8/288 (2%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++R FI +A+T + RAAE +H+T + I ALE ++G LF R NI+L A Sbjct: 1 MQFHQLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELGADLFLRARGNITLTDA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFD-QLISLGDKYEGV 121 G+ L + A E+ R + +G + T + L + +Y G+ Sbjct: 61 GEALLPMARRILADADAARREVQELAELRRGHVRLGATPSLCTGLLPDVLRTYHRRYPGI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQEL--ENLTISELPPLRLGFLVSRRY 179 E + ++ +L LD + + + L E L +L + L Sbjct: 121 QLLVQESGSHDLVRDLARGALDLALVVLPLPSPSPALTTEELLREDLVVVSAPNLPPPGD 180 Query: 180 EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 + L+ + R + + + A R G P A + G Sbjct: 181 GRQVRIADLEHEQLIMFR--HGYDLRDLTVAACRAQGFEPVFAIEGGEMDAVLGFARAGL 238 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 + ++P + V+P+ P + + R Q Sbjct: 239 GVAIVPSMVAQNVDPS--LRVTPIAPPALHRTIALAHRTDVALPRAAQ 284 >UniRef50_A1K6J7 LysR-family transcriptional regulator n=5 Tax=Proteobacteria RepID=A1K6J7_AZOSB Length = 303 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 101/293 (34%), Gaps = 5/293 (1%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R FI +A+ NI RAA ++HM+ P + I LEE++ LF R + L +A Sbjct: 1 MDIRQLRYFIAVAEEANIGRAATRLHMSQPPLTRQIQQLEEELDTQLFVRTPRGMELTQA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIG-IDNTYPTIIFDQLISLGDKYEGV 121 G + + + +G+ + + + I +++ ++Y V Sbjct: 61 GTLFLAEARNIRALIEQATERTQRAGQGKLGRLDVAIFGSAILDRIPKLILNFRNEYPDV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 ++ I L ++ + E + L L + + Sbjct: 121 NVVLHTMTKAEQISALRQNRITVGFNRMLAPLPDIRSEVIATESLL-LAVNLNDPLAAQP 179 Query: 182 RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 ++L P + R NF + A G P + + ++ V G + Sbjct: 180 ALPFDVLARRPVILFPSGARPNFVDKVLALCEARGFLPEVAQEVGDAVTGVALVASGFGV 239 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQE-YLYSIRNHRYTATMLQHIAEDR 293 ++P A L P + Y P + R ++ + +A R Sbjct: 240 CMVPESATTLQYP-GVVYLPFEDAPAEARVDLSCIYRADDHSPILSTFLASIR 291 >UniRef50_B2JSK1 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JSK1_BURP8 Length = 299 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 99/285 (34%), Gaps = 13/285 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + + + L +T + RAAE++H++ P + IA LEE++G LF R + L A Sbjct: 1 MELRHLHYLVTLGETLHFGRAAERLHISQPPLSRQIALLEEELGVGLFDRTSRTVKLTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQ-LISLGDKYEGV 121 G+ Q + + ++ + +G I L + +Y V Sbjct: 61 GEGFLQDAKEILASVERAKRNAISANLGHRGSLSLGFMFAAAFSIAPAILRAYTTEYPEV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + +I +L + +LD + E+ + + L + + Sbjct: 121 HLHVGEAVPSLLIQDLRESRLDVGLMYPP-----GEMAGMETLTVFEEPLVAALPLNHPL 175 Query: 182 R-----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + L++ +L R + F I + + G P I+ V Sbjct: 176 SGSDDPIDAVDLKDEQFLITRREASPYFHDTIINHCKTEGFVPKTFLETNYQHTLITFVG 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRY 281 +G + ++ + P +K+ + P ++ RN Sbjct: 236 QGLGVALVHRSMQTSL-PTNVKFRPLRNPPTVKLNATWNSRNRNP 279 >UniRef50_C7JHS5 Transcriptional regulator LysR n=7 Tax=Acetobacter pasteurianus RepID=C7JHS5_ACEP3 Length = 302 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 101/289 (34%), Gaps = 12/289 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++R F+ +A+ + RAA +++MT P + I LE +G L R + L + Sbjct: 1 MLQLTQVRCFVAVAEELHFGRAAARLNMTQPPLSRQIQLLEHSLGVELLERTSRVVRLTQ 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLI-SLGDKYEG 120 AG ++ + + +GR + +I IG +LI +L Y Sbjct: 61 AGSVFLKEGRRLLRNAEDAALATRRAGRGALGQIAIGFTPGCSYDFLPRLIAALRHHYPD 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E + L R++D H A E + + + + Sbjct: 121 VELMLEEMITRDQLSALASRRIDVGFIRPHFDAPDIE-----RRRIIKEPMLAAIPEDHP 175 Query: 181 ER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 L+ + F ++ + GI P +I+ A +S V+ Sbjct: 176 LALLDVIMPSDLEGQEMIMYSVLGGGYFHDLVHRLLISSGIQPKLIHHLTQINAVMSLVK 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATM 285 G + ++P A R + + + Y + E + R+ + + Sbjct: 236 TGMGVALVPQSASR-LGISRVVYRELGFVKDIFAELFMAFRSDDSSLAL 283 >UniRef50_C6C1H7 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1H7_DESAD Length = 304 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 104/292 (35%), Gaps = 13/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R FI +A+ + RAA ++H+ PF + I LEE++G L R + L Sbjct: 1 MELRQLRYFIAVAEELHFGRAARRVHIAQPPFSQQIKGLEEEVGARLLERNSRKVRLTNE 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDN-TYPTIIFDQLISLGDKYEGV 121 G+ Y++ + + + + I +G +++ + + S +Y GV Sbjct: 61 GRYFYKQALDIVAQAEEAAATVGRMAKGEYGNIKVGFMEIAMDSLLPEAVRSFSHRYPGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY-- 179 + + +F + ++ + +LD S ++ A +E L+ +L + V + Sbjct: 121 SVRLSQFGASIQLERIHSGELDVGFSTVYLRA----MEGLSSVKLFSRKHVLAVPEDHIF 176 Query: 180 --EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 E+ + + L + + I G+ P + + + Sbjct: 177 TAEKSVSLKEIARENLLMFPRSGQPDLYDSIMQAFTSRGLVPKVRQEISGLSGASALISS 236 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G +T +P V + + + Y+ T + Sbjct: 237 GMGVTFLPEN--SRVARKGIAMVPISD-DFPRMDIFMVWNSEDYSNTAGVFM 285 >UniRef50_Q46S95 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=Q46S95_RALEJ Length = 309 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 90/293 (30%), Gaps = 12/293 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 I ++R FI + + + RAA ++ MT SP + I LEE +G LF R + L Sbjct: 2 IPDLNQLRCFIAVGEELHFGRAATRLFMTQSPLSRQIRMLEESLGVRLFDRNSRVVRLTA 61 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLG-DKYEG 120 AG L + + + S ++ +G + LI+ + Sbjct: 62 AGSALLDDARRLLALAGHAVDVARRIDKGVSGKVRVGFTAVAGYELVPNLIARAMQELPE 121 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + E I+ L +D + L L + + Sbjct: 122 IEVTLHEMVTVAQIEALQAGTIDLGFLRPLPDVDPE----LQWRPAVSEPLLLAMHATHA 177 Query: 181 E----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 R E L ++Q F +I + + G P ++ + + ++ V Sbjct: 178 LAARERIAAEDLAGQTFIQYSATEGKYFHDLIGSVLAGAGRPPRVVQQMSQTHSVLALVR 237 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G L ++P A L P R E R+ Sbjct: 238 AGLGLALVPASARHLHFPG--VVLRPIWRDDVRAELRLVWRDANRNPACRVFA 288 >UniRef50_A9I810 Transcriptional regulator, LysR-family n=5 Tax=Proteobacteria RepID=A9I810_BORPD Length = 329 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 109/299 (36%), Gaps = 15/299 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ + +R FI +A+ + +RAA ++H++ P +I LE +G L R ++ L Sbjct: 31 MEL-EPRLLRYFIAVAEERHFSRAAARLHLSQPPLSYAIRQLESTLGTRLLERTSRHVEL 89 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTI-IFDQLISLGDKY 118 +AG+ LY++ + ++ AI + G + IG + + D L ++ Sbjct: 90 TEAGRVLYREAQALLRQSEAIGTLVQRVGAGLRGRLRIGFVGSMLYRGLPDLLAAMRTAL 149 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V E + + I+ + + D + + + L V Sbjct: 150 PDVEHVLTELNSHEQIEAVRRGEQDLGFIHANPAP-----AEVQTLNLVAEPFVLCVPDT 204 Query: 179 YEERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + + L ++ ++ + + G +P I + +++ + Sbjct: 205 HPLARRRRVSLQALAHDDFILFARAASPSYHETVLSLCVTAGFHPAIRHEVRHWLSVAAL 264 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 V +G ++++P R A ++ H + + + + + R Sbjct: 265 VSQGLGVSIVPACLAR-SGLAGTRFIAFDHPARSVSQAI--WPRDTDAPLLRTAVDLVR 320 >UniRef50_A9C046 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C046_DELAS Length = 317 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 106/297 (35%), Gaps = 12/297 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + + +R F+ LA+ + RAA+++ +T P ++ LE+ +G +L R N+ L Sbjct: 15 LMKTHLLRYFVALAEERHFGRAAQRLCITQPPLSMALKTLEQDLGASLMDRDAKNVRLTP 74 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTI-IFDQLISLGDKYEG 120 AG+ + V +L + + + +GI + + D + + Sbjct: 75 AGEAFLVEARKVLAQLQHAADVVRGVAEGMQGRLDVGITGSMVYRQVPDFCRAFRAERPL 134 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E S + + Q+D ++++ L+ L+I E + + Sbjct: 135 VEVCLHEMSTREQLQAIASGQIDCGFL--NIASPPDGLQTLSIGE---EPFVCCLPATHA 189 Query: 181 ER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + L ++ + + A ++ GI+P + ++ ++ V Sbjct: 190 LAQQPDIDLRELARDTFVMFAREVAPANYDNVIACLQQAGIHPHTRHAARQWLTVMALVS 249 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 + ++P R V + + M + + R + A + I R Sbjct: 250 AEQGVALVPSCMQR-VGMNGVVFVPLRGPQQAMTPAVMAWRADQPAALLQAFIERVR 305 >UniRef50_D1RNC3 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RNC3_SEROD Length = 310 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 98/299 (32%), Gaps = 10/299 (3%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + +++R FI +A+ + RAAE++HM P +I +E+++G L R + + + Sbjct: 1 MIELRQLRQFIAVAEEMSFHRAAERLHMAQPPLTAAIRKIEQELGVPLLERGNRITRITE 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGID-NTYPTIIFDQLISLGDKYEG 120 AGQ + + + R + + + +T ++ L ++ Sbjct: 61 AGQVFLIEARRTLAQFERTLGNTRRAARGLTESLRLTFVDSTVNALLPGILRQFRLEHPL 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 E + + L D + D + V+ + E L I R+ + + Sbjct: 121 AEFHLQEATTAEQLIALRDDRADIGMVVLPVAPQ----EGLQIQPFLFDRMVLALPDHHP 176 Query: 181 ERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + L + PWL A I G +P I+ V Sbjct: 177 LAAQRQVTLRDLDDEPWLLFPAHYGPGMHAAILQACAVAGFSPRIVQEARQMQTIGGLVA 236 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDG 295 G + ++P L +P + + + + IA ++ Sbjct: 237 GGVGIALMPALFAVLKSPGVVFRELSGVGSPVPYTLALAWQTPSPLTDAFCRIAAEQAA 295 >UniRef50_Q13T34 Transcriptional regulator, LysR family n=60 Tax=Proteobacteria RepID=Q13T34_BURXL Length = 334 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 110/299 (36%), Gaps = 8/299 (2%) Query: 2 DIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLN 61 +I + +R F+ + + + AAE++ +T K + +LE++IG L R + L Sbjct: 13 EIVELRALRYFVEVVRQQSFTVAAEQMFVTQPTISKMVKSLEDEIGSPLLLRDGRQMVLT 72 Query: 62 KAGQELYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGIDNTYPTIIFDQLISLGDKYEG 120 AG+ +YQ+ V + + E+++ ++ IGI ++ + + +Y Sbjct: 73 DAGRIVYQRGQDVLAAHAQLQAELNDLDTLGRGQLTIGIPPMGGSLFTPAIAAFRQRYPK 132 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + + E + L + +L+ Q V E+ +T L L ++ Sbjct: 133 IELKLFEQGSRAIEAALINGELELGGVLQPVDPENIEVLPVTRQLL---WLVARTGSNWD 189 Query: 181 E--RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + L P++ ++ R G PTI+ R + + V G Sbjct: 190 DLHEVPLAQLANEPFVFY--GESLALNDVVLNACRTAGFAPTIVGRSGHWDFMAALVLAG 247 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 + ++P R ++PA + + + RN + + R+ Sbjct: 248 VGIALLPAPYCRRLDPAKFTCRPVIEPEIPWEMAIGWRRNGYLSHAARAWLDVAREALP 306 >UniRef50_B5XSE9 Transcriptional regulator, LysR family n=6 Tax=Enterobacteriaceae RepID=B5XSE9_KLEP3 Length = 296 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 116/293 (39%), Gaps = 12/293 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R+F+++A+ ++ RAAE++H+ + I LE+++G LF+R + ++L A Sbjct: 1 MSLRALRHFVVVAEELHMHRAAERLHIAQPALSQQIKQLEQRLGVVLFSRANRRLTLTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP--TIIFDQLISLGDKYEG 120 G+ QK + + + R + +G ++ + + L L + G Sbjct: 61 GEAFLQKTRLALEMADQAVLDAQRTARGEQGRLHLGYVSSAMYDSKLPGLLRELRADWPG 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + V+ + + L D +LD I +++ + L + +L + +++ Sbjct: 121 IELSLVQGDVQMLYEALLDLRLDIAIIRAPLASPP---DALVVRPFVREKLCLALYQQHP 177 Query: 181 ERQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 L+ W+ + E + R G P ++ R + IS V Sbjct: 178 LAGVGALNLASLRTDNWISLDDPQGTGLEQVFIDACRVAGFTPQVVQRINDVTSMISLVS 237 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + ++P A R + + Y D R + E H +A + + I Sbjct: 238 AGVGVALVPVSA-RALRLDNVVYIDLQDR-LAESELSMVYHRHFRSAVVRKVI 288 >UniRef50_C6Q0M3 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0M3_9CLOT Length = 311 Score = 256 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 111/304 (36%), Gaps = 25/304 (8%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++++ + +A+ N ++AA K+ ++ + I +E ++G LF R + + L A Sbjct: 1 MDFRQLQYVLTVAEEKNFSKAAHKLFISQPSLSQYIQKIELELGTQLFDRSSSPLKLTFA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G+ + + + +I++ R+ ++IG+ T I +++ DK+ + Sbjct: 61 GELYIETAKNILDLKDQLYQQINDIANRKKGRVIIGLSPVRSTYIMPKILPIFHDKFPDI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE- 180 +E + + D + + + + E + E+ ++ + Sbjct: 121 EVVLIEDISSTLETLAVKGSTDIDLITTPMKNDMLDFETIFSEEIL-----VVIPPNHPI 175 Query: 181 --------------ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPY 226 E + L+ P++ ++ + M + G +P II Sbjct: 176 QSKIKYKTSAKSTHPTIELKELKNEPFILLKRDQK--LHKMATSLCEQAGFSPRIILESE 233 Query: 227 SFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTA-TM 285 S A + + G +T +P + + + ++ + + + RY + Sbjct: 234 SIEAAHALAKAGMGITFVPDTLISAHQTEPYPLYCSIDKLRPTRDVIVAYKKGRYLSVAA 293 Query: 286 LQHI 289 + I Sbjct: 294 KEFI 297 >UniRef50_Q1LM47 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LM47_RALME Length = 300 Score = 256 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 95/294 (32%), Gaps = 14/294 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F + + + RAA+ + + + I LE ++G LF R + LN Sbjct: 1 MELRHLRYFACVGEAEHFGRAAKLLKIAQPALSRQIQDLEAELGVALFDRLPRGVRLNAV 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGI--DNTYPTIIFDQLISLGDKYEG 120 G+ + + ++ + + +G + + D L + +++ Sbjct: 61 GRSFLDDARRILREVNEAKLRVERIAAGQTGTLRVGFGETQAWHGAVPDSLRAFREQHPT 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V + + + +D + LD + ++ +L + + Sbjct: 121 VELELHAMASSRQVDAVSSGNLDAGFIFSLTKPPSE----FAHRKVARHKLVLAAPKDHP 176 Query: 181 ----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCG-INPTIIYRPYSFMAKISAV 235 + L+++P++ F + G + P I+ + +S V Sbjct: 177 IMSLDSVRLRELRDVPFIWFHRWVYPRFHDRLIRACLRDGALAPQIVQQVTDHATMLSLV 236 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + + A R PA + + YL + + + + + + Sbjct: 237 SCRLGVAFVSE-ATRWQCPAGVALRPVDDLNFSLPFYLI-WKKNNSSTLLREFL 288 >UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=Burkholderiales RepID=A1TN88_ACIAC Length = 307 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 95/298 (31%), Gaps = 13/298 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F +LA + RAA +++M+ P +I LEE++G LF R + L A Sbjct: 1 MELRHLRYFAVLADELHFGRAAARLNMSQPPLSVAIRQLEERVGAQLFERTPKEVRLTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTI-IFDQLISLGDKYEGV 121 G+ L V + +E + + IG + L ++ GV Sbjct: 61 GRALKASARRVLAQAEEALSEARGVAAGLAGRLRIGFVGAMLYRGLPQALGVFQQRHPGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + I L +LD + L L + + Sbjct: 121 RVSLQELNSGEQIGELLHDRLDLGFVHT-----SRMPATLQQRLLVTEPFLCCLPAGHRL 175 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + L P++ ++ A I + G P I + ++A +S V + Sbjct: 176 ARRKVIDLRDLAGEPFVLFARAVSPDYHARILSICASAGFQPEIGHEVRHWLAVVSLVSQ 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDG 295 G + ++P P + F + E + +A G Sbjct: 236 GLGVALVPQAMEHSRLPGAV--FRPVGPAVAQSEAYAVWPAAPENPLVGDLMAILLAG 291 >UniRef50_B9J8D6 Transcriptional regulator protein n=69 Tax=Proteobacteria RepID=B9J8D6_AGRRK Length = 298 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 95/294 (32%), Gaps = 13/294 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ N RAA +I + P I LEE+IG LF R + L +A Sbjct: 1 MELRHIRYFLAVAEELNFTRAARRIGIGQPPLSNQIRDLEEEIGAPLFRRLPHGAELTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP--TIIFDQLISLGDKYEG 120 GQ ++ + R + R + +G + I+ + S Y Sbjct: 61 GQVFLREARAILTRAGQAKALALRAARGELGRLRVGFTGSAAFSPIVPSSVRSFRRTYPE 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + E +++ L +LD + + L + + + Sbjct: 121 IDLTLEEAHTTRLLERLDAEELDAVFIRPGRTGPP----GFRSHVLGEESMVIALPSSHP 176 Query: 181 ERQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + L + P++ + I A R G P + + + + Sbjct: 177 LAEADTLPLSTLSDEPFVLFPRAAGPSLFDEIIAACRRAGFEPILGQIAPQITSIANLIA 236 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 ++V+P A + + Y + + R +A + IA Sbjct: 237 VELGVSVVP-LAVAEIQVPGVSYIPISGDG-PVARLALATRRDECSAVVRNFIA 288 >UniRef50_C1BAS4 Putative LysR family transcriptional regulator n=2 Tax=Actinomycetales RepID=C1BAS4_RHOOB Length = 299 Score = 256 bits (654), Expect = 8e-67, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 98/292 (33%), Gaps = 12/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ +A+ N RAAE++H+ + I+ E+++ TLF R + L A Sbjct: 1 MELRQLRYFVTVAEEMNFRRAAERLHIAQPALSQQISKFEKELRTTLFERTTRRVELTDA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQ-LISLGDKYEGV 121 G+ L + V + + IG ++ I +++L ++ GV Sbjct: 61 GRVLLDEGRRVLAEADHALAAVEQVAHGEVGLLRIGFVSSAALRIVPATVLALQKEWPGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + + + + D LD + V E + + L L + + Sbjct: 121 QVELSESTTDRQLSAIADGILDIGLVR-----EVDRAEGIVVRPLTREPLLVAMHSSHPF 175 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L++ +L + I A G F + V Sbjct: 176 AGRASVRLVELRDERFLTFPRGQVSRLYDHIAALCHHAGFRLEAAQEAVQFPTLLGLVAA 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 +TV+P R ++ L+Y + + + + + Sbjct: 236 NTGVTVVPAS-LRALHLPDLRYVALSDAQAVSTVSVAYRADRQQIPAIRHFL 286 >UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=Clostridia RepID=Q3AG03_CARHZ Length = 302 Score = 256 bits (654), Expect = 9e-67, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 104/293 (35%), Gaps = 18/293 (6%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F +++ N+ RAAE++H+ +I LE+++ LF R + L Sbjct: 1 MEFRQLEYFYAVSKLNSFTRAAEQLHVAQPSITIAINNLEQELKVQLFDRSKRKVVLTDE 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G+ Q + + + + +E+ + + I +GI +F ++ + Y + Sbjct: 61 GKLFLQHVEKILKDVKKAQSELEDLKNYKKGVIKLGIPPMIGAYLFPKIFKGFKNAYPHL 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE- 180 E ++ L + +LD + ++ ENL + + ++ VS + Sbjct: 121 ELHVREEGSWAMVSLLENGELDLGLIILP-----EQSENLCMLPITKDQIVLCVSENHRF 175 Query: 181 ---ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 +R L++ ++ + + + I A G +P I+ V Sbjct: 176 SQEKRISLRQLEDEQFILL--KEDSYTRHKIIALCNYYGFSPNILLSSCQIETIKELVSN 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHR-YTATMLQHI 289 G +T + + + + K + + R + I Sbjct: 234 GLGITFLMNGITKKWD----KIVSIQLEEPMNITIGLAWQKDRCLSRAAQAFI 282 >UniRef50_D2ATF2 LysR family transcriptional regulator n=2 Tax=Actinomycetales RepID=D2ATF2_STRRD Length = 297 Score = 256 bits (654), Expect = 9e-67, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 101/294 (34%), Gaps = 13/294 (4%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 +++ F +LA+ + RAAE++ + P + I LE ++G+ LFTR ++L AG Sbjct: 8 LQQLHAFAILAEELHFGRAAERLGIAQPPLSQQIRRLEVKVGHPLFTRGPGRVTLTPAGH 67 Query: 66 ELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTA 123 EL ++ + +G + + IG + + L+ D+Y GV Sbjct: 68 ELLPAARRALDEIAIGLDAARRTGNGEAGRLRIGFSASLALTLLPGLLRGYRDRYPGVDM 127 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER- 182 + E + + L + +D + + L + ++ + Sbjct: 128 EIREMTTAPQVAALREHVIDIGLLREPPDEP-----GLVTETILSEEFVAILPTAHPLAG 182 Query: 183 ---QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 + L + P++ + I R G P + + + VE G Sbjct: 183 QRVVSIKALADEPFVLLPRSAGPTVHDQILDVCRSAGFEPRLGQHAVEWQTVSALVEAGL 242 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 +++ P R + + Y + R + + +A R Sbjct: 243 GVSLAPASIRR-IRLKGIAYRRI-EPNTARSTVAMTWRRDDRNPLVPRFLAAAR 294 >UniRef50_Q7WNE4 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNE4_BORBR Length = 293 Score = 256 bits (654), Expect = 9e-67, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 94/293 (32%), Gaps = 13/293 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++++ F+ LA+ + RAA ++ ++ P +I LEE++G LF R +++L A Sbjct: 1 MDLRQLKYFVALAEELHFRRAAARLSISQPPLSHAIKLLEEELGTALFERTTKSVALTSA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGID-NTYPTIIFDQLISLGDKYEGV 121 GQ Y + V +L G + IG + + + + V Sbjct: 61 GQAFYPEALKVLAQLQVACAVTREVGAGKRGHLRIGFVGGMLLRGLPEIVRDYAQRNPEV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E S + QL + A E + + V R + Sbjct: 121 IVTLHETSSAEQAKAIARGQLSAGFLHAGLLAPELEGQVIR-----DEPFVACVPRDHRL 175 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + L + + + A G +P I + ++ + + R Sbjct: 176 AGRRVIDVRQLAGEDMVLFARDVSPGYYDSVIALCMDAGFSPRIRHEVAHWLTALLLISR 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 G + ++P ++Y ++ + + + +A Sbjct: 236 GGGVALVPDPFVD-AGLDGVRYLRLKACD-SRSYAHFAWKRDASDPLLREFVA 286 >UniRef50_A0R5A9 Transcriptional regulatory protein n=16 Tax=Bacteria RepID=A0R5A9_MYCS2 Length = 309 Score = 256 bits (654), Expect = 9e-67, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 96/294 (32%), Gaps = 13/294 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 +F ++ FI +A+ + RAAE++HMT P + I LE ++G L R +++L Sbjct: 1 MFSLSRLSCFIAVAEELHFGRAAERLHMTQPPLSRQIQQLENELGVHLIDRTTRSVTLTP 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEG 120 AG + Q + +VIG + +L+ + ++ Sbjct: 61 AGVAFLPDARRILQLAEGAALNVKRVPAGDLGTVVIGFTAASAHAVLPRLLDAAREQLPD 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 VT E I+ L +LD ++ + L L +L + + Sbjct: 121 VTLDLREMVTAAQIEGLMTGELDLGMARPPLKRP-----GLVSRPLLHEQLIAALPASHP 175 Query: 181 E-----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + L + F ++ + G P + + V Sbjct: 176 LVDVGRQLTLNDLDGQDMIMYSPVQARYFNELLISTFTIAGATPRYVQYVTQVHTMLVLV 235 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + ++P A ++P + + E R +L+ + Sbjct: 236 RSGIGIALVPASAAT-LHPEGVVFRSIGAFRERPVELDAVWRGDSTNPALLRLL 288 >UniRef50_B4T1W6 LysR family regulatory protein n=58 Tax=Enterobacteriaceae RepID=B4T1W6_SALNS Length = 295 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 111/300 (37%), Gaps = 16/300 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + +R F+ + + + RAAEK+ +T K + LE+++ TL R + L Sbjct: 1 MDI---RTLRYFVEVVRQQSFTRAAEKLFVTQPTISKMLKNLEDELNCTLLIRDGRKLLL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 G+ ++++ + ++ E+ + + +GI ++ + +Y Sbjct: 58 TDTGRVVFERGLAILAEFRQLEAELSDINHLNKGVLRLGIPPMVGMLMAGPISLFRQRYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 GV + EF V + + +LD ++ V +E LT L L LV R Sbjct: 118 GVELKISEFGGLTVQQAVMNGELDVAMTALPV----EEASGLTTLSLFSHPLCVLVPRSG 173 Query: 180 EE----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + E L E P + + + + P I R + + V Sbjct: 174 QWTTCDSIAPEALAEHPL--LIYNEDFALSRQLMTLFSQHDVKPRIAVRSGQWDFLAAMV 231 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDG 295 + G + ++P + ++ ATL++ + R Y + + +G Sbjct: 232 QAGVGIAILPEPICQRLDKATLRWLPLESD--LRWQLGMIWREGVYLSHSARAWLTCCEG 289 >UniRef50_UPI0001C35EAB LysR family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35EAB Length = 291 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 96/290 (33%), Gaps = 7/290 (2%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M S+ + F ++A+T + AA+K+ ++ P K I LEE +G L R L Sbjct: 1 MGQMNSRHLYYFTVIAETGSFTAAAKKLGLSQPPLSKQIMMLEEDLGVRLLNRGARKAEL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQ-LISLGDKY 118 +AG LY + + + +E+ N + +G ++ + D+ L + Sbjct: 61 TEAGAYLYSRARDILSMMDTAASELQNFPSSAKGILKLGTISSSGDYLADRVLPGFCRLH 120 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + E + +++ L + ++ + + T L + + Sbjct: 121 PNVRFEISEGNTYELLEKLKNGIIECAVVRTPFNTEGLHCVFGTEEPLTAVGVASWFDAL 180 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + L P + R F+A+I + G P I R + G Sbjct: 181 PDGSIRLTDLAGKPLIYYRR-----FDAIISMAFQNIGAVPDIFCRNDDARTCLQWAGAG 235 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 + ++P + L + +N + + Sbjct: 236 LGVALVPESISSMKTAEGLTVRTIDSPETVTRMTAIYKKNGYVSNIAKEF 285 >UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Sagittula stellata E-37 RepID=A3K7Z5_9RHOB Length = 333 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 102/289 (35%), Gaps = 12/289 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ +A+ N RAAEK+ + P + I LE+Q+ L R ++SL Sbjct: 29 IELRQLRYFLAVAEELNFTRAAEKMGIAQPPLSQQILVLEQQLRVKLLNRSRRHVSLTPE 88 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGID-NTYPTIIFDQLISLGDKYEGV 121 G+ + + R + + ++ T++ + ++ V Sbjct: 89 GEAFILYARRIINNTQIAAELVGAIKRGEEGPLSVAAIFSSIYTVVPQLFEAFVAQHPRV 148 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + + L + ++D I + E L +VS+++ Sbjct: 149 RFHLQEMTIGQQLVALREERIDLGILRGPIIHPEIETHTL-----LEEPFVVVVSKKHPL 203 Query: 182 RQEQELLQE----LPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 ++ L + P +++ ++ + + + P I++ + V Sbjct: 204 AKQTILTADQVLSQPLIRVIPSVNRDYSHQMFSVLANRNTTPNIVHEVSDTHTLLGLVAA 263 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATML 286 G ++++P R ++ L+Y L +++ T+ Sbjct: 264 GMGISMVPASV-RSIHTDQLRYIPLREGTPTSTIQLAWLKDSDSTSLPR 311 >UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=Enterobacteriaceae RepID=C5BEX8_EDWI9 Length = 312 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 105/295 (35%), Gaps = 13/295 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ + + ++ RAAEK+ +T K + LEE++G TL R+ + L + Sbjct: 1 MDVRTLRYFVEVVRQHSFTRAAEKLFVTQPTISKMLRNLEEELGCTLLIREGRGLRLTDS 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGIDNTYPTIIFDQLISLGDKYEGVT 122 G +YQ+ + + + E+ + G + + +GI T + + +Y G+ Sbjct: 61 GNVVYQRAQTILDQFGQLRTELDDLGALKKGSLKLGIPPMVGTQMAGLIGEFRQRYPGIE 120 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE- 181 EF V + +LD ++ + L L L+ R+ Sbjct: 121 LHIAEFGGLTVEQAVLSGELDLALTALSAQPDPA----IASLPLFSHPLYVLLPRQAPWL 176 Query: 182 ---RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 L + + + + G+ P I R + + V+ G Sbjct: 177 TRSALGMTDLAQQN--ILLYNEDFALYQQLMQAFSAAGVKPQIAVRSGQWDFLAAMVQAG 234 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 + ++P + ++P +L + P M + RY + Q Sbjct: 235 VGIAILPQPICQRLDPHSLLWLPL--APTLMWRLGLIWCHGRYLSHSAQAWIARC 287 >UniRef50_C9XXC7 HTH-type transcriptional regulator budR n=7 Tax=Enterobacteriaceae RepID=C9XXC7_CROTZ Length = 290 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 102/293 (34%), Gaps = 13/293 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +AQT + RAAE + ++ P + I LE ++G L R + L +A Sbjct: 1 MELRYLRYFVAVAQTRHFTRAAELLGISQPPLSQQIQRLEREVGTPLLRRLTRGVELTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNT--YPTIIFDQLISLGDKYEG 120 G+ YQ + A + R + + IGI ++ + IF L +Y Sbjct: 61 GEAFYQDACQILALSDAALEKTRGIARGVNGTLSIGISSSNAFHPHIFSLLHEFQHRYPA 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 +T E + ++ +L + LD + + + + + + R + Sbjct: 121 ITLLQQEANMASLMHDLEEGLLDAAFVRLPCES----SKAFNLRLIDIEPMVAALHRSHP 176 Query: 181 ERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 L P + + ++ G+ P + + +S V Sbjct: 177 LSGRDEVALSELAGTPLILFPHEVAPGLYELVFNACLRAGLTPADSQQASQLSSSLSMVA 236 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G T++P + +P F + + R + ++ + + Sbjct: 237 AGFGFTLVPVSMQCIGHPE--VTFHRLSDQTLKTDIALAWRKFERSPSVRRLV 287 >UniRef50_B2TMS2 Transcriptional regulator, LysR family n=3 Tax=Clostridium botulinum RepID=B2TMS2_CLOBB Length = 299 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 115/298 (38%), Gaps = 17/298 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R F+ +A+ +I AA+K++++ P K + LEE++G TLF R ++ L Sbjct: 1 MDI---RQLRYFLTIAEEGHITAAAKKLNISQPPLSKQLKLLEEELGVTLFNRTSRSLEL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQ-LISLGDKY 118 AG L K + + + NE+ N + IG + + Q + +Y Sbjct: 58 TDAGILLQNKSSQLLELYKSTVNEMKNFNNGIEGTLGIGTVCSSGINVLPQKIKEFCKQY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENL--TISELPPLRLGFLVS 176 + + E + +++ L + +D + + + + + + Sbjct: 118 PKIDYEIYEGNSFKIMELLNNGVIDVGFVREPFNLSLYNSFVIKDNLENNLNDYFVAIAK 177 Query: 177 RRYEERQE-----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAK 231 ++ E L++ P + R ++ +I + G P II + + Sbjct: 178 SKFYNSIESNTILINKLKDKPLIINRR-----YDDIIKSACNKAGFEPHIICKNDDIITS 232 Query: 232 ISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 +S E G ++++P A ++ LK + L +N + I Sbjct: 233 LSWAEAGIGISILPLTASNILPNVNLKIKKIIEPSIESYLRLIWTKNKPLSNISRNFI 290 >UniRef50_C5AIL5 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AIL5_BURGB Length = 309 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 101/299 (33%), Gaps = 17/299 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ RAAE++ M P + I LEE+IG+ LF R ++L A Sbjct: 1 MELRHLRYFLAVAEEGQFTRAAERLAMQQPPLSQQIRLLEEEIGFDLFVRLPRGVALTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP--TIIFDQLISLGDKYEG 120 G+ Q V L R I +G+ ++ + D + + G Sbjct: 61 GRAFAQNAGLVLDTLQQGVAHARRIARGELGAIAVGLTSSAGFHPLTTDAIRAFRAANPG 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + E + +I+ L QL + V A + ++ + ++ + Sbjct: 121 IEIALSERNAAELIEGLSHGQLQVAFLRKPVDAP----SGVAFEQMLDEPMVAVLPVGHR 176 Query: 181 E---------RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAK 231 + L+ ++ +R A + A R G P + + + Sbjct: 177 LLAAIGDAPPAIPLKALEPEAFILVRRPGAPGMYADLLAACRRHGFVPQVAHEVPRMLTG 236 Query: 232 ISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 I V G +T++P R N +T+ + + +A Sbjct: 237 IHMVAAGLGVTLVPASMRRYDNRSTVFC-PLTADAGLSAPLHLAYPAELRDPAAARFVA 294 >UniRef50_D0IX94 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0IX94_COMTE Length = 294 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 88/296 (29%), Gaps = 8/296 (2%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ +A+ N +RAA+++HM+ P + I LE+++G LF R ++L A Sbjct: 1 MDLRRLTCFLAVAEELNFSRAAQRLHMSQPPLSQQIRLLEQEMGAQLFERSRRAVALTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTI--IFDQLISLGDKYEG 120 G L K + + + + + + I + P L ++ Sbjct: 61 GLLLQDKARQIVELHQQAGELVRMAAHGLAGRLRIAFTASVPLFDEFSTMLRDFRSRHPQ 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVS---ARVQELENLTISELPPLRLGFLVSR 177 V + I L Q+D + + L EL Sbjct: 121 VELDLQHMTTGEQIAALTAGQIDIGFMRPSPTFRIPVPIREQTLWRDELKLALPVAHAKA 180 Query: 178 RYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 E L + P++ I A G P I ++ V Sbjct: 181 AAGEALALSSLADQPFVLHPAVLGGGLHEHILALCSEAGFVPRIAQPARETSTMMALVAA 240 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 G L+++P R+ P + + R Sbjct: 241 GLGLSIVPSVYERICPPG--VVLQPLADAARHSRIALVSMQQAPSPCVQMFWQLLR 294 >UniRef50_A9HWS6 Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9HWS6_BORPD Length = 320 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 85/289 (29%), Gaps = 9/289 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ +A+ + RAAE +H+ SI LE +G L R +SL A Sbjct: 7 IDLRQLRQFVTIAELGSYRRAAEALHIAQPALSVSIQKLEHSVGVLLLERGAKGVSLTPA 66 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQ-LISLGDKYEGV 121 G L + +G + ++ + L + +Y V Sbjct: 67 GAALMDDARRALFHADQARQSARRVALGELGRLRLGFVGSATYMLLPRCLPAFRHRYPDV 126 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E S + + L +LD + ++ + L + + Sbjct: 127 ELELREDSTVRLAEMLRANELDAGLVRGPLAEDTSLSAWVVER----DSLILALPAAHPL 182 Query: 182 RQEQELL---QELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 L + P++ + A R G +P I +S V G Sbjct: 183 AGGPVSLQAVRSEPFVMYAPDKVPGLYGVAQALCRKAGFSPRISQEAIQVQTLVSLVASG 242 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 + ++P P + A +L+ Sbjct: 243 LGVALVPGVTRAYSTPHVVFADLLDADARDALALSLVAHRDTSCAPVLK 291 >UniRef50_A4JSC2 Transcriptional regulator, LysR family n=4 Tax=Burkholderia RepID=A4JSC2_BURVG Length = 303 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 102/297 (34%), Gaps = 14/297 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ +A+ + AAE + + P + I LE +IG LF R + L A Sbjct: 1 MEFRQLRYFLAVAEYLHFTEAAEFLGIAQPPLSQQILKLEREIGTRLFIRHPRRVELTDA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTY--PTIIFDQLISLGDKYEG 120 G+ ++ + + E N+GR S +V+G + + + Y Sbjct: 61 GRLFRERAKHIVEEAELALAEAQNAGRGLSGRLVLGFAGSIVFHPFVASLMQRFRRDYPD 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E + +ID + + ++D + + + L + L R ++ + Sbjct: 121 VLIHCEESNSPALIDKVLEARVDAALVRLPL-----DCRGLAVQPLVEERFLAVLPSGHR 175 Query: 181 ERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 E L L + P + I G PT+ A ++ V Sbjct: 176 HGAEPVLALHALSDDPLVLFPRAIGPALYDAIVGACWAAGFTPTVEMESPQIPASVNLVA 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 G +T+IP R + Y P+ + R + + + R Sbjct: 236 AGFGVTLIPESV-RQAPTDRVTYHGLQGEPL-RSPIVLVHRPREKSPVIQNLVRAVR 290 >UniRef50_C8WE41 Transcriptional regulator, LysR family n=4 Tax=Zymomonas mobilis RepID=C8WE41_ZYMMN Length = 304 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 114/300 (38%), Gaps = 18/300 (6%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R+F+ +A+ + +AAE++ +T P +SI ALE+++G LF R +++L Sbjct: 1 MDI---RQLRHFLAVAENLHFGKAAEQLGITQPPLSQSIMALEKELGIALFIRNKRHVAL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQL-ISLGDKY 118 G+ + + A+ S + + +T I L Y Sbjct: 58 TPFGEAWRDYVEAALNEVDALPQIAERLKEGSKGHLDLSFVSTADFNILPILVRRYRALY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V E + + I +L I S+ + +L+ +L L V Sbjct: 118 PDVELSLSEATSDLQISDLTKGLRHAGIIIPPRSSELP--SSLSYKKLVSEPLIAAVPAL 175 Query: 179 YEERQEQEL---------LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFM 229 + + Q L +++ P + F ++ + CG P I + Sbjct: 176 WIKEQRLSLVNRKLSPNSVRQAPLIIFPRHFAPAFYDIVMDYYQACGGYPNIAQQAIQMQ 235 Query: 230 AKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 IS V + ++P R + ++Y + +P + E + R T T+ + + Sbjct: 236 TIISLVAASMGIAIVPRS-LRHMARRDVRYIEL-QKPAALLETGIAWRKDDQTPTLTRFL 293 >UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F961_ACIC5 Length = 288 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 104/292 (35%), Gaps = 15/292 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++R +A+T N +RAAE+ + + + LEE +G LF R ++ + +A Sbjct: 1 MEFHQLRYVCAIAETGNFSRAAERCQVAQPSLSQQVLKLEEDLGVKLFDRLGRSLRITEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQL-ISLGDKYEGV 121 G+ + ++ A + S + +G+ T + + + KY Sbjct: 61 GRAFLPHARSILHQMEAARASVAGKSKDVRGSVAVGVIPTIAPYLMPRYTAAFARKYPEA 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + VE + ++++L + +D + + + +L L + ++ + + Sbjct: 121 RLRIVEETTPVLVESLRNLSIDLAVLALPLRHK-----DLECIPLLTEPMFAVLPKDHPR 175 Query: 182 RQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + L+ ++ +R + F + A + P I + F + V Sbjct: 176 ASAQTLSLKDLRGETFVMLR--DGHCFRDLSLAACSHARVTPRIAFESGQFRSLFGMVAA 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G ++++P A + A Y ++R + + Sbjct: 234 GMGVSLVPQMA--MDRSAGCAYVRLSDARAARTVVAATLRGRSFNHMQQAFL 283 >UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Actinomycetales RepID=A4FE82_SACEN Length = 294 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 102/295 (34%), Gaps = 17/295 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ +A+ + RAA+++H+ S SI +LE ++G LF R N++L A Sbjct: 1 MELRQLEYFVAVAEECHFTRAAKRLHVAQSGLSASIRSLERELGARLFHRTTRNVTLTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTI-IFDQLISLGDKYEGV 121 G L + + + + + G E+ IG + + L + G+ Sbjct: 61 GHALLHEARRALCAVDSARDAVAAVRGLLRGELSIGTLQCLHVVDLPPVLAGFVTAHPGI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE- 180 + + + + + +LD + + + + + L L + + Sbjct: 121 EVRLRQGGSGDLAEQVRAGRLDLAFAVRPARCP----DGVLVHSLDTEPLVLACAGDHPM 176 Query: 181 ---ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 +R + L E P++ ++D + G+ + + + V Sbjct: 177 AERDRVDPRELGEQPFVDF--HPDWGTRDVVDRVLAETGVERRVALEVTDVHSLLELVAC 234 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAED 292 G + ++P +++ + + T+T + D Sbjct: 235 GLGIALVPRSF--SAKNGQVRFVPLASPAPTWETVAIT---SDPTSTAAAALLRD 284 >UniRef50_Q1LGR3 Transcriptional regulator, LysR family n=3 Tax=Burkholderiales RepID=Q1LGR3_RALME Length = 304 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 104/292 (35%), Gaps = 13/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ LA+ + RAA ++ +T P +IA LE +G L R ++L A Sbjct: 1 MDLRQLRYFVALAEELHFGRAAARLAITQPPLSFNIAKLEASLGVQLLQRTTREVALTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP-TIIFDQLISLGDKYEGV 121 G+E+Y++ + + + R + +G + T + +++ + G + V Sbjct: 61 GKEIYKEALKILALTANARELAGRAARGEIGAVHVGFVGSAVLTPLGERIRAFGAIHPDV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + ID L R +D I V +L L+ + Sbjct: 121 DVVLHELNSFEQIDALQARHIDIGIIHPRVIPNGIASHSLH-----GEHFICLLPADHPL 175 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + L+ ++ F I A G P I ++ + + V + Sbjct: 176 ARDRTIDVRELRHDDFVLFPRHFSPEFHDQIVALCASVGFTPNIRHQVRHMLTIATLVAK 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 ++++P +V L + E + R+ + +L + Sbjct: 236 RFGVSIVPRSV-DVVTLPNLACRPL-GKQATPSELVGIWRDDEQGSAVLSML 285 >UniRef50_D2S9A0 Transcriptional regulator, LysR family n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S9A0_9ACTO Length = 304 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 38/294 (12%), Positives = 88/294 (29%), Gaps = 13/294 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F +A+ + RAA ++H+ + + LE+ +G L R + L A Sbjct: 1 MELRHLRAFTAVAEELHFGRAARRLHLAQPALSQQVKQLEQDVGAVLLERTTRQVRLTSA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFD-QLISLGDKYEGV 121 G + V + + + R E+ +G+ + + +Y V Sbjct: 61 GTVFLEHAHRVLREAELARESVLVTERGERGELRVGVTGVITWRLLPRMARAYRRRYPHV 120 Query: 122 TAQPVEFS-ENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + + L D ++D V A L + L ++ + + Sbjct: 121 RLELRPSVFSAAQVSALIDGRIDVGFLRAPVPAG-----PLASRVILNESLMAVLPQDHP 175 Query: 181 ERQEQE----LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 E E L + ++ + G P ++ ++ V Sbjct: 176 LAGEPEVHLADLADENFVSYVSMQGSALRDAAVHACFSAGFTPRVVQEAPDTHTVVALVG 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 + ++P A + + + + R + + +A Sbjct: 236 AAVGVALMPASA-ETLQIEGVVFTPIAGGVDVRVPIALAWRESDSSPVLAGFLA 288 >UniRef50_C8X9S9 Transcriptional regulator, LysR family n=5 Tax=Actinomycetales RepID=C8X9S9_NAKMY Length = 298 Score = 252 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 99/301 (32%), Gaps = 13/301 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ +A+ + RAA ++ + SP ++I LE ++G TLF R +++L A Sbjct: 1 MEIRQLEAFVAVAEELHFGRAAARLRLAQSPLSQTIRKLERELGVTLFDRSTRSVALTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTY-PTIIFDQLISLGDKYEGV 121 G L V++ L G + +G + ++ +Y V Sbjct: 61 GAALLPHAHRVFEELELGRQATRAVSGAVYGTVTVGFSGALNHRTLPPLTRAVRRRYPQV 120 Query: 122 TAQPVE-FSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 T V + + LD + A L + LG + + Sbjct: 121 TLNLVAGMLTRDGVLQIERGSLDLCFVALPLDASPAVRSRL----IAREPLGVALPIDHP 176 Query: 181 ERQEQE----LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 ++ E L + ++ + + G P ++ ++ V Sbjct: 177 LAEDPEVDLADLADEDFITTPAASGSGLREAGVRACIGAGFRPRVVQEITDPFMILTLVA 236 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGT 296 G + +I +++ ++ + P Y+ + + + +A D Sbjct: 237 AGVGVALISDGVAQIMPSGSV-FVPLRGAPTYLDH-ALAWSADNPSTVLRAVLAVADDVM 294 Query: 297 S 297 Sbjct: 295 P 295 >UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCK2_BREBN Length = 295 Score = 252 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 109/296 (36%), Gaps = 21/296 (7%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R + +A+ + +RAA ++H+ + IA LE+ +G +LF R ++ L A Sbjct: 1 MELRQIRYVLAVAEERSFSRAANRLHLAQPSLSQQIAKLEKILGVSLFHRLPQHVELTDA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGIDNTYPTIIFDQ-LISLGDKYEGV 121 GQ Q + ++ E+ S ++++G + + L + ++ GV Sbjct: 61 GQRFIQVAQTLVDMSEGLEREMRAYAVGESGKLLVGSLPITGAYVLPRVLPTFTKQFPGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 Q +E + + + L ++D + +S +L I + V + Sbjct: 121 ELQLMEETSSHLEQLLVRGKIDVSLLTMPISDP-----SLEIIPAINEEIFLAVPANHPL 175 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + + + P++ + + F + G P I++ + S V Sbjct: 176 AKRKEVDLAEVADQPFILL--KEGQGFRTISLRLCEQAGFRPRIVFESSNIQTAQSLVAA 233 Query: 238 GHFLTVIPHFAWRLVNPATL---KYFDAPHRPMYMQEYLYSIRNH-RYTATMLQHI 289 G L+ P + P T+ Y +P + + + R + + Sbjct: 234 GMGLSFAPKMIT--LAPGTIEPPTYVRIKTKP--SRTLVVAYRKDKPLSRPAEAFV 285 >UniRef50_B4SSK9 Transcriptional regulator, LysR family n=3 Tax=Stenotrophomonas RepID=B4SSK9_STRM5 Length = 302 Score = 252 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 102/305 (33%), Gaps = 18/305 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A T + +AAE++ M+ P + I LE+ IG LF R + L A Sbjct: 3 IELRHLRYFLAVADTLHFGQAAERLGMSQPPLSQQIRQLEDLIGARLFVRSHRRVQLTAA 62 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNT--YPTIIFDQLISLGDKYEG 120 G+ L ++ + ++ + +E+ + R E+ IG+ I ++ +Y Sbjct: 63 GELLQERARAIVLQVESAVDEVQRAQRGEQGELRIGLTRATPLSPQIPRSILQYRQRYPQ 122 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V Q E + ID L D LD I + L L L +V + Sbjct: 123 VRLQLSEMNTLQQIDALLDGSLDVGIIRKRALPPE-----LVAHSLFVDPLALIVHADHP 177 Query: 181 ERQEQE--------LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 + + P++ R A + A G P I+ I Sbjct: 178 ALRRLSKQGTLSLRDFAQEPFVAFRRSAGAGIHDHMIALCAAAGFTPRIVQEAGEASTLI 237 Query: 233 SAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAED 292 S G ++P + ++ E + T + Sbjct: 238 SLAAAGLGAAILPSSC-DHIRVEGARFVALADAGA-HSEVQLAWHREGVTPLIRNFAGLL 295 Query: 293 RDGTS 297 R+ + Sbjct: 296 REAFA 300 >UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=Bacillales RepID=B7IPY3_BACC2 Length = 300 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 114/291 (39%), Gaps = 13/291 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M++ +++ F +A+ ++ +AAE++H+ K+IA LE+ +G LF R+ I+L Sbjct: 1 MELL---QLKYFQTVARLEHMTKAAEELHIAQPSLSKTIARLEKDLGVPLFDRQGRQITL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLISLGDKYE 119 N G+ +++ ++ LS + EI + + I + + + P I+ + L S ++ Sbjct: 58 NSFGKVFLKRVERIFHELSEGEREIKDLAELQQGSITMAV--SIPRILPELLGSFLREHP 115 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V Q S + L + ++DF +S V E L E+ L R Sbjct: 116 NVRFQQFLASTPSMKRQLENMEIDFCLSSVPVEGEEIVWEPLITEEIF---LVVPSGHRL 172 Query: 180 EERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 R+ L +++ P++ M F + D + G P I + +++ Sbjct: 173 SNRESIHLHEVKDEPFISM--NTGYGFRHLTDEFCKEAGFTPHIAFEVDEPTVISDLIKQ 230 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G + +P+ + L + + T Q Sbjct: 231 GLGIAFVPNLTLLKNSTLAANKLRIIEPACKRTIGLSWSKKRYLSKTAQQF 281 >UniRef50_Q5WCI6 LysR family transcriptional activator of glutamate synthase n=6 Tax=Bacillales RepID=Q5WCI6_BACSK Length = 301 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 93/287 (32%), Gaps = 12/287 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ +A+ ++ AA +H+ S + I LE ++G LF R+ + L Sbjct: 1 MEIRQLLYFMEVAKREHVTEAAAALHVAQSAVSRQIFNLESELGVDLFIREGRRVKLTPI 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTI-IFDQLISLGDKYEGV 121 G+ +++ + E+ + I + + + + + +Y Sbjct: 61 GKIFLERIKHAMNVIDDAKREVQEYLDPKKGTIRVAFPISLAAYTLPTAIYAFRKQYPEA 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 Q + +ID + + + E + +T L R+ L+ + Sbjct: 121 KFQLKQGLYRELIDGVIKGDYNMALI----GPVPMEEKKITPRILFAERIVALLPIHHPL 176 Query: 182 RQEQE----LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + E L+ P++ + F ++ G P I + A V Sbjct: 177 AKSAEINLLDLKNDPFVLLP--EGFVFRDLVINACSEIGFVPQIAFEGDDIDALKGLVSA 234 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTAT 284 G +T++P P + + + + T Sbjct: 235 GLGVTLMPEVTLVDNTPRSTVKIPLSEPNVTRTVGVITPTERGLLPT 281 >UniRef50_B0MH18 Putative uncharacterized protein n=4 Tax=Bacteria RepID=B0MH18_9FIRM Length = 304 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 93/300 (31%), Gaps = 19/300 (6%) Query: 1 MDIF------ISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRK 54 MDI K++ F+ LA+ N AA ++ + S K+I A+EE + L R Sbjct: 1 MDIMGKERSMNLKQLTYFVALAKNQNFTTAANELFICQSALSKTIKAMEEDLDVQLVDRT 60 Query: 55 DNNISLNKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPT-IIFDQLI 112 L G+ LYQ+ + ++ + + + EI +GI T + Sbjct: 61 AKRFCLTPEGRMLYQEGRDALESINNQMEHLRDCINAENGEISVGIPPVISTIYFASIIQ 120 Query: 113 SLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLG 172 Y G+ E N V + + ++D + ++ + I + Sbjct: 121 GFRKAYPGIRLVIAEEGANTVKEKVQSGEIDIGVVILPFASD-----DFHILPVFKSDNV 175 Query: 173 FLVSRRYEERQEQ----ELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSF 228 VS + + L+ ++ + + G P I+ + Sbjct: 176 LTVSTDHPFAGREKAAFRELRNEEFISL--DKTFMLHSRTRELCHMSGFEPNIVMESSQW 233 Query: 229 MAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 V + ++P N +K L ++ + + Sbjct: 234 DFVAEMVSLNQGVAILPRPILSRFNSDKIKILTLTEPEFPWDIALIIRKDKYVSNPIRHF 293 >UniRef50_A9BWC5 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=A9BWC5_DELAS Length = 319 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 101/296 (34%), Gaps = 14/296 (4%) Query: 2 DIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLN 61 D+ +++R F+ + + +I RAAE++ M P + + LE ++G L R + Sbjct: 17 DVPELRQLRAFVAITEEGHITRAAERLGMQQPPLTRLLQGLEHELGVELVQRLPRGVRPT 76 Query: 62 KAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP--TIIFDQLISLGDKY 118 AG L ++ + +R + + + R + + +G ++ + L + Sbjct: 77 AAGLALLEESKALLERCDVLAEVVRRAARGETGRLAVGFTSSAALHPFVPGVLRMFRQQV 136 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 GV E ++D L +LD + + L + + + Sbjct: 137 PGVAVALEEAGTGELMDALLHERLDAAFVRSPLHG----SQGLQAVPILEEPMLLALPAG 192 Query: 179 YEERQEQE------LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 + + L ++ R + I G +P ++ A + Sbjct: 193 HALARPLRRPVPLPQLASEDFVLYRRRVGQGLYDAILKACLEAGFSPRVVQEAPRMTATL 252 Query: 233 SAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 S V G L+++P R + + Y P + R +A + + Sbjct: 253 SLVSAGLGLSIVPASMQR-LRSDGIVYRALSQCPGLAAPLHLATRVGDASAVLRRF 307 >UniRef50_C3NNS3 LysR family regulatory protein CidR n=22 Tax=Vibrio RepID=C3NNS3_VIBCJ Length = 302 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 96/293 (32%), Gaps = 7/293 (2%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + + +R F+ L + +A+E++ +T K I LE+++ L R+ L + Sbjct: 10 LMDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTE 69 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYEGV 121 AG+ +YQ+ + ++ +D E+ + + + +GI + Y V Sbjct: 70 AGEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVGHVYARLFRQYRQTYPNV 129 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQ-HVSARVQELENLTISELPPLRLGFLVSRRYE 180 VE+ + + D +D ++ L + + + R Sbjct: 130 ELTVVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPIFAVVPDIPLWRSL- 188 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 + + P+ F + I + G P + R + ++ V+ G Sbjct: 189 TTLTWAQISQEPF--YLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVALVKSGVG 246 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 + +P + + + + P RY + + Sbjct: 247 VCFLPAPLCQRIQGDGVLIYPIT--PAIDWRLGVVWHRERYVSKTAEAWIALC 297 >UniRef50_D0IZT6 Transcriptional regulator, LysR family n=5 Tax=Comamonadaceae RepID=D0IZT6_COMTE Length = 316 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 104/289 (35%), Gaps = 13/289 (4%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 +R F++LA+ + RAA+++ +T P ++ ALE+ +G L R N+ L AG+ Sbjct: 18 LRYFVVLAEELHFGRAAQRLCITQPPLSMALKALEQDLGTVLMERDAKNVKLTPAGEAFL 77 Query: 69 QKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTI-IFDQLISLGDKYEGVTAQPV 126 + V +L + + + IGI + + + + V Sbjct: 78 HEARKVLAQLQHAAEVVRGVAQGLQGRLDIGITGSMVYRQVPGFCRAFRAERPLVELCLH 137 Query: 127 EFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQE 186 E S + + Q+D ++ ++ L+I E + + + E Sbjct: 138 EMSTRDQLQAIARGQIDCGFL--NIGTPQDDIRTLSIGE---EAFVCCLPSDHALARRAE 192 Query: 187 L----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLT 242 L L + ++ + + A ++ GI+P + ++ ++ V G + Sbjct: 193 LDLRELAQDTFVMFAREVAPANYDNVIACLQQAGIHPHTRHAARQWLTVMALVSAGQGVA 252 Query: 243 VIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 ++P + F A + + R +A + +A Sbjct: 253 LVPACMQTVGMNG--VCFAALRGSRVTTPAVLAWRPRGMSAVLEAFVAS 299 >UniRef50_Q03CT2 Fhu operon transcription regulator n=4 Tax=Lactobacillus casei group RepID=Q03CT2_LACC3 Length = 292 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 106/296 (35%), Gaps = 11/296 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 K++ F+ +A+ + AA+++HM P + ALE+++G LF R + L + Sbjct: 1 MNLKQITYFLAVAEAGQMTAAAKQLHMAQPPLSYQLKALEDELGVRLFERGSRGVRLTGS 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQ-LISLGDKYEGV 121 GQ+ + + ++A +N SG + +G+ ++ ++ Q L + +Y V Sbjct: 61 GQQFMTYAQQIVETVAAAENAARRSGEGEIGTLALGLTSSAGDVLPKQKLQAFNRRYPQV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + G++D L LD I + L+ + S+ Sbjct: 121 EFALYEDNTYGILDKLRRNILDLAIVRTPFNDDGLASCRLSSDHMIA---VAAASQPLPA 177 Query: 182 RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 L++ P + R F ++ GI P I + + G + Sbjct: 178 TLTIPDLKQQPLIVYRR-----FSSLFKTTFAEYGITPIIAVLCDDARTALHWAQMGMGV 232 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 ++P L + + + P L + + + + + G S Sbjct: 233 ALVPATMAALASQQSHLAV-IDYEPWVTHMTLVWQPEALHNPLVARFVGQLSGGES 287 >UniRef50_B1K9P6 Transcriptional regulator, LysR family n=22 Tax=Proteobacteria RepID=B1K9P6_BURCC Length = 306 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 98/294 (33%), Gaps = 13/294 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++ R FI +A+T + RAAE++HM P +I LE+++G L R + L Sbjct: 1 MIDLRQFRQFIAVAETLSFRRAAERLHMAQPPLSTAIRKLEDELGVALLERDNRGSRLTP 60 Query: 63 AGQELYQKLFPVYQRLS-AIDNEIHNSGRRSREIVIGID-NTYPTIIFDQLISLGDKYEG 120 AG+ + ++ A+ + + +T ++ L + +++ Sbjct: 61 AGEAFLLEARRALEQAERAVAVARRAGAGLGGTLRLRFVDSTVNALLPLILRAFQERHPN 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V Q E + + L + D + V+ ++ + L R+ + + Sbjct: 121 VDFQLEEGTTADQVLALRQDRTDAGLVVLPVADAG----DVHVEPLLRDRMVAALPDGHR 176 Query: 181 ERQE-------QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 L + PW+ + A+I G+ P ++ +P Sbjct: 177 LAHRRRIALAELAELADEPWVMFAAHHGPGMHALIVTACAQAGVAPRVVQQPRQMQTTAG 236 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 V G + ++P + E + R L+ Sbjct: 237 LVAGGIGVALMPRLFVPMHPQGITFCELKDAGSPLAYELALAYRTPSPLVDALR 290 >UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Tax=cellular organisms RepID=CYNR_ECOLI Length = 299 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 105/300 (35%), Gaps = 15/300 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +S+ + F+ +A+ + RAA +H++ + I LEE +G LF R I L A Sbjct: 1 MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIF-DQLISLGDKYEGV 121 G+ Q Q L A IH+ + I + T+ + + +Y + Sbjct: 61 GEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 T Q E S+ + D L +LD I+ V + L L L +V++ + Sbjct: 121 TLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPE-----LEAIPLLTESLALVVAQHHPL 175 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L + + + + ID G++P ++ S A + + R Sbjct: 176 AVHEQVALSRLHDEKLVLLSAE--FATREQIDHYCEKAGLHPQVVIEANSISAVLELIRR 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 T++P LK + L +N TA + D + Sbjct: 234 TSLSTLLPAAIAT--QHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCA 291 >UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus subtilis group RepID=Q65GU9_BACLD Length = 299 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 108/291 (37%), Gaps = 15/291 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++ +FI +++ + +AA + ++ +SI LEE++G LF RK +I L K Sbjct: 1 MELYQIDHFIAVSRHKHFTKAALEQRISQPALSRSIKKLEEELGVPLFIRKTKSIRLTKY 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G++ K L +I + EI + +T + + QLI+ KY V Sbjct: 61 GEQFLIKAKQARLALDEGVQQIRESVNPNAGEISVSFLHTLGSRLMPQLIAEFKKKYPNV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + + + + + D +S + E+L + L L ++ + Sbjct: 121 AFRLYQAANEHLQHMVETGEADICLSSPPLPN-----EHLEWTVLDTEPLYLVLPADHPL 175 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 +E+ + ++ F+ + D R I+P + + + V Sbjct: 176 ADRKEVAIRSIAHEDFV--CFKPGYGLRYVFDQMCRGLSISPKLAFEGEEVSTILGLVSA 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G + ++P A + +P + + L +++H + Sbjct: 234 GLGVAILPKTAEHVHSP--VAFCRVSDYRSERTIGLAVLKDHYLSPAARNF 282 >UniRef50_Q74DH4 Transcriptional regulator, LysR family n=1 Tax=Geobacter sulfurreducens RepID=Q74DH4_GEOSL Length = 302 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 102/299 (34%), Gaps = 10/299 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F A+ N RAA ++H++ + I LE ++G LFTR+ + L A Sbjct: 1 MELRHLRYFAATAEELNFTRAANRLHISQPAVSRLIKELECELGAQLFTRERFGLRLTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYP-TIIFDQLISLGDKYEGVT 122 G++ V Q + +G +++ IG +T + + D L+ L + + Sbjct: 61 GEKFLFYARRVLQDCEEGIRAVRENGLNHQKLTIGFISTAMESFLSDALVRLSQERPDID 120 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 E S I L RQ+D E E + E+ L ++ R+ Sbjct: 121 VTVNEMSPGDQIAALRYRQIDLGFIGNPHDGAGDEFELYVLREV---PLVAVLPVRHRLA 177 Query: 183 QEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 E+ L+ ++ +I G P + S + + + G Sbjct: 178 GRSEICIGELEGDTFIGYLEDKFPGRNRVISTACARAGFRPKFELKAGSLIEVLGMIGTG 237 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 + ++P + + + ++ + + Q IA S Sbjct: 238 KGVCLMP-SDVAGLPHPNVAFIPLRDPLDPVR-LAAAWLPGNTNPALHQLIAILAADCS 294 >UniRef50_Q20XL9 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q20XL9_RHOPB Length = 297 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 95/293 (32%), Gaps = 5/293 (1%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 S ++R F+ +A+T + RAAE++H++ I LE ++G LF R +L + Sbjct: 1 MESSQLRCFLEVAETLHFTRAAERLHLSQPALSTQIEKLERELGVDLFERSHKKTTLTYS 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G ++ + S + + IG +T + QL+S + V Sbjct: 61 GTLYREEARKILALGSRAVERARQAAAGQIGRLRIGFISTAAAYVIPQLVSDFRKQAPNV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + ++ L +LD + L E L L + Sbjct: 121 ELDLRHYLTAQQVNLLCGGELDIGFLRIPLREPRGLSTILVHEEPYKLFLPATHPLASQA 180 Query: 182 RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 R E + L ++ N F + M GI P + + IS V G + Sbjct: 181 RLELQDLDGAEFVTYSKLNAPGFAETLATVMLQAGIRPAATHEASDMYSLISLVSAGVGI 240 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRD 294 + P L D + E + R+ L I R Sbjct: 241 AIAPASLQN-YRLPNLVIRDLQG--IRPSEVALAHRDGIDHPAALAFIRAARV 290 >UniRef50_Q12BV9 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q12BV9_POLSJ Length = 323 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 99/296 (33%), Gaps = 11/296 (3%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + + R F +A + RAA +++MT P ++IA LE +G LF R ++ L Sbjct: 27 LIELRLWRQFAAVADELHFGRAALRLNMTQPPLTQAIAHLEALLGLKLFDRTKRSVQLTA 86 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFD-QLISLGDKYEG 120 AG L + + R A+ + + + + +T + + + ++Y Sbjct: 87 AGAALLPEARDLLARAQALPVYARATADGEAGRLRLAFVSTVGFDLLPGWVRTFRERYPK 146 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V + +E + + + L ++D + + LT + L V + Sbjct: 147 VQLELIEATGDVQLQALERGEIDAGFM---LHSPGFAPPGLTCRRISQDPLVLAVPEQSV 203 Query: 181 ERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + + L E P + + I A G P + ++ V Sbjct: 204 LVGKSGLVLQDLLEQPLVIFPRHILPSLYDAIFAMYHAAGHLPRVAQEAIQMQTIVNLVS 263 Query: 237 RGHFLTVIPHFAWRLVNPATLKY--FDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 G + +P + P + + + E + + + +A Sbjct: 264 AGLGVAWVPDSVRQFQRPGVVYRELKRGKGQVVPGCETSLVWAAGAASPALQRFMA 319 >UniRef50_P94403 HTH-type transcriptional regulator bsdA n=3 Tax=Bacillus subtilis group RepID=BSDA_BACSU Length = 290 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 106/291 (36%), Gaps = 6/291 (2%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNN-IS 59 MDI +++R FI +AQ I AA+K+HM P + + LE+++G LF R ++ Sbjct: 1 MDI---RQLRYFITIAQEQKITSAAKKLHMAQPPLSRQLKQLEDELGVVLFDRNKKKQMT 57 Query: 60 LNKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKY 118 L G ++ + R E+ + + +G ++ +++ + ++Y Sbjct: 58 LTYEGAVFLKRAKEILHRFEDAVIEVQELKEEVAGTLAVGSTIYCAALMLEKVTQIKERY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 +T E +++ L RQ+D ++ + + + + L L L Sbjct: 118 PHLTFNIWENEPATLLELLESRQIDAAVTTTLIKSDTVQFKQLDDIP-CVLVLSDEAGYP 176 Query: 179 YEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + + + P + +R N + + P I+ + +S V G Sbjct: 177 CGDTIKMVDIPSFPLILLRPVNGKGVYNQVMNEFHRLNLEPRIVCECHDSATLLSLVSSG 236 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 +++P + + + P M + + Q + Sbjct: 237 FGASILPVTMIPVHMRNHVHTVHIENNPFIMTPAVMWRTDSYLPKPAQQFL 287 >UniRef50_C1DMS0 Transcriptional regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DMS0_AZOVD Length = 307 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 99/292 (33%), Gaps = 4/292 (1%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++++ F+ +A+ N RAAE++++T + I LEE I L R ++L A Sbjct: 1 MEIRQLKYFVAVAEELNFNRAAERLYITQPALSRQIQQLEEAIPAVLLERNSKRVALTDA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIG-IDNTYPTIIFDQLISLGDKYEGV 121 GQ Y + + +L +E +VIG ++ I L+ G + V Sbjct: 61 GQAFYHQALNILAQLQRAADESRLLAEGKKGSLVIGIFGSSILDFIPRVLLEFGRTHPAV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 ++ I L +R+L + E E L E L L + Sbjct: 121 EISLHPMDKDAQIQALRERRLTIGFNRLVPGEPDIEQE-LVRREALMLALPAKHPLAARD 179 Query: 182 RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 E + + P++ R + P + I+ V G L Sbjct: 180 AIELGEVLQEPFILYPRGVRRGLTTHVRRLFADYDALPRVAQEVTDVTTSIALVAGGLGL 239 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 V+P A + ++Y R E R + + +A R Sbjct: 240 CVVPRSAVN-LRLPGVEYRALRCRGKAEIELACLYRKGDGSPLLRAFLATVR 290 >UniRef50_Q0K190 Transcriptional regulator, LysR-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K190_RALEH Length = 295 Score = 249 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 105/294 (35%), Gaps = 13/294 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ +A N ++AA ++HM+ P + I ALE+++G L R + L A Sbjct: 1 MELRQLLYFVTVADELNFSKAAVRLHMSQPPLSQQIKALEDEMGVELLVRNRREVRLTDA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNT-YPTIIFDQLISLGDKYEGV 121 G+ V +++ + + IG+ + ++ L + +++ G+ Sbjct: 61 GRAFQADCRAVLEQVRVAVTTARRTAAGDIGTLQIGMVTSGIFHVLPTILTRMAERFPGL 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + +LD I + L + + +V +E Sbjct: 121 HIAVTDMGSADQAHAVMQGKLDIGIV-----HSIPTRSGLGKTPIFTEYFTIVVPEGHEL 175 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L L+ +P + ++ + A+ G +P I + + + V+ Sbjct: 176 AARPALALRDLEGVPLVAFSREHAPALFDGMIASCLHAGFSPVIAHTARNPLTTFQMVKL 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 G + ++P R P F + + R + +++ ++E Sbjct: 236 GLGVALVPRSYARAGLPG--VVFREIGQTAGHIQLYAIWREQAPSDLVMRVVSE 287 >UniRef50_C5CMN8 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CMN8_VARPS Length = 302 Score = 249 bits (638), Expect = 7e-65, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 109/302 (36%), Gaps = 10/302 (3%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + +++R F+++A+ N RAAEK+HM+ P +I LE Q+G L R +++ L Sbjct: 1 MIEFRQLRQFVVVAEELNFGRAAEKLHMSQPPLSVAIRNLELQVGTLLIDRSRHHVRLTP 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP-TIIFDQLISLGDKYEG 120 AG+ + + + A + + + + + + ++ D Y Sbjct: 61 AGKVFLKDAQRLLTQAHAATERARRAAQGAEGSLSLSFVPSAALDLLPDIFKRFQRDYPT 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V + ++ L ++D + + Q++ +L +L V R + Sbjct: 121 VHLHVTAETTTRQVEALRRAEVDLALVVGPL----QDVPDLAFVDLQAQGFVIAVPRSHA 176 Query: 181 ERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 ++ + L ++ A F A + + + G +P ++ A ++ V Sbjct: 177 LAKQRSVKIKALAAESFIAFPAAEGAGFVAALLSACKAAGFSPRVVQEASQMQAVLTLVA 236 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGT 296 G + ++P L A R + ++ + +A Sbjct: 237 GGLGIALVPASMRMLAMKDVAFLDVAETRAPPTYQLAFAYSRTNDNPVIHSFLAVAGKAV 296 Query: 297 SH 298 +H Sbjct: 297 AH 298 >UniRef50_Q4KEU3 Transcriptional regulator, LysR family n=8 Tax=Pseudomonas RepID=Q4KEU3_PSEF5 Length = 305 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 107/294 (36%), Gaps = 12/294 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + +K+R F+ +A+ + RAA ++H+ P + I+ALE ++G+ LF R ++L Sbjct: 1 MLDLRKLRYFLTVAEELHFGRAALRLHLAQPPLTRQISALETELGFRLFDRTSRTVTLTA 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP--TIIFDQLISLGDKYE 119 G+ V +++ + ++ +G ++ + + + ++ Sbjct: 61 QGRHFLPYARAVLEQVDLAQVMAGKLAAGCAGQLALGYASSIALSDLFSQAIQAFAQRFP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V VE + + D ++D +S + ++++L+ L L +S Sbjct: 121 DVQLTLVEGASVSQWSQIVDGRIDIGMSRMQPPSEQSDIQSLS---LGDEPLVAAISSDS 177 Query: 180 EERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + L E P + + I+ R G+ + I+ V Sbjct: 178 PLAAQAQVTLAELSEHPLILFPADYGSGLNEAIEQLYRRNGLPLRPGPSGRQITSIIALV 237 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + ++P + + + Y Q + + + R + + + Sbjct: 238 AAGQGIALVPR-CTQTLAKKGVTYRPLADPSATAQLLVLTRKQGR-SQLVEAFM 289 >UniRef50_Q2T257 Transcriptional regulator, LysR family n=16 Tax=Proteobacteria RepID=Q2T257_BURTA Length = 323 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 96/297 (32%), Gaps = 4/297 (1%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 +F ++R F+ +A+ + RAAE++HMT P + + LE QIG L R ++ L Sbjct: 26 MFELSQLRCFVAVAEELHFGRAAERLHMTQPPLSRQVRLLEHQIGTELLERTSRSVKLTA 85 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLI-SLGDKYEG 120 AG+ + + + + IG + + L+ ++ Sbjct: 86 AGRGFLPDAARILRLADEAAATARRIATGAAGTLAIGFTASVGYGLLPSLVSAVRAASPD 145 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E ++ L R +D + V L L L + + Sbjct: 146 VRLTLKEMVSGAQLEALDARLIDVGLLRPPVEHGELASLPCMREALV-LALPAASADAWP 204 Query: 181 ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF 240 +R + P L F ++ + + P I+ + ++ V G Sbjct: 205 KRPTLRDCEGKPLLMYSPYEARYFHQLVSGLLERTDVLPDIVEYVSQIHSMLALVRAGIG 264 Query: 241 LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 +IP A +++ + Y P E + R R + Sbjct: 265 AALIPA-AASMLHFEGVVYRPVRTMPAKPVELTLAYRKDNDNPVFAALKDVLRKSLA 320 >UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7ZAS3_BACA2 Length = 296 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 116/294 (39%), Gaps = 17/294 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++ F +AQ +I +AA+++ ++ +SI+ LE+++G LF RK NI LN+ Sbjct: 1 MDWHQINYFQTVAQVQHITQAAKQLSISQPALSRSISKLEDELGVQLFDRKGRNIYLNRY 60 Query: 64 GQELYQKLFPVYQRLSAIDNEI-HNSGRRSREIVIGIDNTYP-TIIFDQLISLGDKYEGV 121 G+ ++ +++ E+ + S I++ + +++ D + S Y V Sbjct: 61 GKMFLHRVEQSIRQIEIGKQEVWNEIHPNSGTILLSFLPSLGMSMVPDVISSFQHMYPHV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 Q + S +I+ L R++D ++ E +++ L L VS + Sbjct: 121 NFQLTQASNQQIIEQLTSREVDIALTSL-----RDENDDVICQPLLTEELYLAVSAEHPL 175 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + ++ + P++ + N MI G +P +++ + V Sbjct: 176 ASYDEIDLKMAEHEPFISFKDTN--VLHGMIKELCEKAGFSPDVVFEGEDIVTASGLVGA 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRN-HRYTATMLQHIA 290 +++IP V T + P+ +E + R + IA Sbjct: 234 KLGVSLIPDL---HVFDKTKVKLLSVTNPICEREIGLAWRKDGYLSPAAENFIA 284 >UniRef50_C2C4F2 LysR family transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4F2_LISGR Length = 286 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 109/286 (38%), Gaps = 7/286 (2%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 K++ F+ + + I AA+K+H++ P I LE+++G +F R I+L ++ Sbjct: 1 MNLKQLEYFLAIVEEGQITAAAQKLHISQPPLSYQIHLLEKELGAKVFVRGSKGITLTES 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQ-LISLGDKYEGV 121 G++L Q+ + NEI + S + IG +T ++ ++ + L Y + Sbjct: 61 GKQLKQRAEQILSLAELTKNEIGKYQQGKSGTLRIGTVSTSAGLLPNKEMQQLTADYPHI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + ++D L + ++ + + + E + + + S +E Sbjct: 121 HFEIYEDNTFNILDKLKNGMIELGVVRTPFNNQNIEGKYFNTEPMIAVFSELPQSWSKKE 180 Query: 182 RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 L E P + R FE +I A ++ I I+ + G + Sbjct: 181 TVALADLSEQPLVIYRR-----FEQLIHATFADQQLHTFISCTCDDGRTAITWAKSGMGI 235 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 ++P +++ Y + + + + + + + Sbjct: 236 AIVPASIGKMMKVDKANYKTIDYPEWWTKLAIIWLAEAELSPLAKR 281 >UniRef50_Q48IW5 Transcriptional regulator, LysR family n=8 Tax=Pseudomonas RepID=Q48IW5_PSE14 Length = 299 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 97/300 (32%), Gaps = 12/300 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 +F ++R F +A N RAAE+++MT P + I +E +G LFTR +++L Sbjct: 1 MFELSQLRCFTTVATELNFRRAAERLNMTQPPLSRQIQIMEHNLGVELFTRSTRSVALTA 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLIS-LGDKYEG 120 AG+ + + + +R + I + ++I+ K Sbjct: 61 AGRAFFIEAQTLLERAQQAAISARRFAEGDIGSVTISFVGSAVYEFLPRVIAEARLKQPQ 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E + + L R++D I + E E L V + Sbjct: 121 VKISLTEMNTYQQHEALRARRIDLGIVRAPLFQPGYESECL-----VREPFVLAVPGNHR 175 Query: 181 ER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 L+ P+L F ++ R + P + S + ++ V Sbjct: 176 LAHADSVTVADLEGAPFLMYSHSAYPPFNELLTGMFRSARVAPEYVQWLGSSLTILALVN 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGT 296 G L ++P A +V + + D E R + R Sbjct: 236 AGMGLALVPRCATNVVFKD-VVFRDIDLGEGVQSELHLVWRADNDNPACRMLLKAIRAAV 294 >UniRef50_A9C1Z6 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C1Z6_DELAS Length = 295 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 102/287 (35%), Gaps = 10/287 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R+F+ LA+T N +AAE++HM+ P +SI LE+ +G LF R +L +A Sbjct: 1 MDLRQLRHFVTLARTLNYRQAAEQLHMSQPPLSQSIRRLEDSLGVQLFQRDRRGTALTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 G + + +G + IG + + +L+ + +Y + Sbjct: 61 GLAALESAELALHHARQMQEVSRATAGGERGRLHIGFIGSATFSLIPRLVQAFRSEYPLI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + + + D + V+ + +L+I+ + L ++ Sbjct: 121 DLVLTESTTREICAQVASGDFDAGLLRYPVT----QATDLSITPVEKDELVAVLPEGNPL 176 Query: 182 ----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L + P++ R A++ + G P + +S V Sbjct: 177 LQRPALRLRDLADQPFINYRPSEVPGLHALVVLACQNAGFMPQVKQHAVQAQTLVSLVGA 236 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTAT 284 G + ++P + P + A + ++ + A Sbjct: 237 GLGVALVPAVVAKGSTPGVVFRALADTENLPSIGLALALNPQQSAAA 283 >UniRef50_D1UNR7 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UNR7_9BURK Length = 314 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 91/294 (30%), Gaps = 13/294 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++R F+ A N RAA ++HMT P + I LE+ +G LF R + L Sbjct: 1 MLDLGQVRCFVAAATELNFRRAAARLHMTQPPLSRQIQLLEDNLGVKLFERVGRTVKLTT 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFD-QLISLGDKYEG 120 G+ + ++ + + + + + +G + L++ D Sbjct: 61 EGRVFLADASRLLNLAEQAESTVRRASKGKTGRVRLGFTGAAGYELIPELLVAAADALPE 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V +E I+ +D + + L + L + R+ Sbjct: 121 VDVVLLELVSAAQIEAFAANAIDLGFLR-----PLPSRQKLEFVRVDEEPLIVALPTRHA 175 Query: 181 E----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + E + L P++ F I + G+N I +S V Sbjct: 176 LCAFAQLELKQLDGQPFIMPSPAQGKYFHDRIMGILAAEGVNLNIAQYIDQTPTILSLVR 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 G L ++P A R F E + R + + Sbjct: 236 AGLGLAILPASAQRFHYDN--VEFRLIAGNTLHAEMSMAWRADQDNPAVTAFRL 287 >UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=Frankia sp. EuI1c RepID=D1VD43_9ACTO Length = 361 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 97/300 (32%), Gaps = 15/300 (5%) Query: 6 SKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQ 65 +++ F+ +A+T + RAA ++H+ I ALE ++G LF R NI+L AG+ Sbjct: 21 LQQLAYFVAVAETKHFTRAAARVHVAQPSLSAQIRALETELGSPLFNRARGNITLTAAGE 80 Query: 66 ELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGVTA 123 L + E+ R + +G + T + +++ +Y G+ Sbjct: 81 ALLPLARKILADADMARREVQELTDLRRGTVRVGATPSLCTGMLPEVLRLFRQRYPGIQL 140 Query: 124 QPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQ 183 E ++ L LD + + L + L L + S Sbjct: 141 LVEEGGSRDLVGELAVGALDLALIILPLQGSDPA---LATAPLLREDLVVISSPDGPPPV 197 Query: 184 E-----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 E L++ P + R + R G PT A V G Sbjct: 198 RTAQMAVEDLRDRPLVMFRR--GYDLRDFTVGACRAAGFEPTFAIEGGEMDAVCGFVMAG 255 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH 298 + VIP L+ ++ L R+ + A D ++ Sbjct: 256 LGIAVIPSMVAFRQP---LRTTPFAAPGLHRTIGLAHRRDVEPPRAARELRATLVDFVAN 312 >UniRef50_C6DI39 Transcriptional regulator, LysR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DI39_PECCP Length = 308 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 105/290 (36%), Gaps = 12/290 (4%) Query: 2 DIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLN 61 D + K++ F+ +A+ + RAA ++ M+ P + I LE+ + TLF R +L+ Sbjct: 5 DYRLIKQLYLFLAVAEEEHFGRAAARLGMSQPPLTEQIKILEQSLKLTLFERSRRGTTLS 64 Query: 62 KAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYP-TIIFDQLISLGDKYE 119 AG+ + ++ +++++ + + I IG + ++ + L Y Sbjct: 65 PAGKAILPQVKRFVDHMASLEKMVKEVAQGKVGVIHIGAITSAMFDVVPEFLNYFKHHYP 124 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 VT E I +L +LD + L L LG + + Sbjct: 125 DVTVFVNEIDSAEAISSLLSGKLDMAFVRV----EGDIGQTLKSIPLTEDLLGVALPVEH 180 Query: 180 EER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 L++ ++ + + ++ + R G NP I+Y S A+I+ V Sbjct: 181 PMSCNNEIRLGDLKDEAFVMSSRRVNPTYFDILTSACRENGFNPRILYEVRSVTAQIAYV 240 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATM 285 G ++P R + P ++ + + + Sbjct: 241 SCGQGAALVPLSMSRFI-PGNVRLIPLKE-SIKIVTAALVWNPGNGHPLV 288 >UniRef50_Q2RZH0 Transcriptional regulator, LysR family n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZH0_SALRD Length = 300 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 90/297 (30%), Gaps = 13/297 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F LA + RAA+ + + S + I A EE+IG LF R + L +A Sbjct: 1 MELRHLRYFTALADELHFGRAADAVFVAQSTLSQQIKAFEEEIGVALFDRASGGVELTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G V + ++ + + + I + +I K Sbjct: 61 GHTFLPYAKRVLREARRAESVARAARDGLAGLLTITYAASAMRSGLPAIIKTFRSKRPHG 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 VE + +D L ++ D ++ R L + L + ++ + Sbjct: 121 ELDLVEQTTREQVDALRGKETDVGFLFLPINER-----GLRVQPLFTAPMVVVLPTGHRL 175 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L+ P + G P I + + VE Sbjct: 176 ADRTSVPLRELEGEPHVIWARSGAPRIHDAYVRACHEAGFTPQIPQEIERGESFLGLVEA 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRD 294 G +++ ++ P + Y + + + R + + + + D Sbjct: 236 GLGVSIAHASNVQIQRP-GVGYAKIVEPTVPL-TLGLAYRRDNDSPLLDRFLETVAD 290 >UniRef50_C0CQ02 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CQ02_9FIRM Length = 295 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 108/296 (36%), Gaps = 10/296 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++++ F+ LA+T + + A+ +++ + + I +LE Q+G LF R + L A Sbjct: 1 MNLRQLKYFVTLAETLSFTKTAQVFYISQTAVTQQIKSLESQLGVPLFRRTKRKVELTSA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTY-PTIIFDQLISLGDKYEGV 121 G + + ++ + + S + IG+ Y + + + L + + Sbjct: 61 GAVFLPEAREILEKTQKAIVKTKLAYTGSSDTLRIGVVQGYEHSDMPEALHRFRAQNPNI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + + L + +LD + + +++ N++ L L + + Sbjct: 121 SISIFRSDASDLYCALQEIRLDVAFNSRIAPGNLEDF-NISSHTLATYPLMVFLHPSHPL 179 Query: 182 RQ----EQELLQELPWLQM-RFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + L P + + + + + G PTI+ ++ A + V Sbjct: 180 VRKKECSLSDLNHEPLIFPDLRNDPSGYNKCLLDYFVQTGFVPTIVQESSNYEAILLMVA 239 Query: 237 RGHFLTVIPHFA-WRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 + ++P +A N + + + + + N + T+ + ++ Sbjct: 240 ASLGIAILPSYAHVLAHNLGNITAIPLTGE-ISSLDIVIAWHNQNHNPTIQKFLSA 294 >UniRef50_B6B1G4 LysR family transcriptional regulatory protein n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B1G4_9RHOB Length = 326 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 101/302 (33%), Gaps = 15/302 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ +A+ + AAE++ M + I LE ++G+ LF R ++SL +A Sbjct: 1 MDLRQLRAFVAVAEELHFRTAAERLGMAQAAISTKIKDLESELGFKLFFRTTRHVSLTQA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVI-GIDNTYPTIIFDQLISLGDKYEGV 121 G + + L + + I GID + L K+ V Sbjct: 61 GAVFLESVRDTLNTLENGVAAASAAADNRLDRLRIGGIDGALIWYLPPILRDFTAKFPSV 120 Query: 122 TAQPVE-FSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + E S ID+L +D L R+ + R + Sbjct: 121 SPTMTESSSSEDQIDSLESHHIDIAFFRPPTMRP-----GFKFELLLQERIYVALPRNHR 175 Query: 181 ERQE-----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + L + P + R + +I G+ P II + V Sbjct: 176 LATRTGPVSIKELADDPVISYPIHARPHLNRLIVNGFAKAGVRPKIIMEVIDKFTTLQLV 235 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDG 295 RG + +P + L P + + +Q + R + T+ + + R+ Sbjct: 236 ARGIGVAFVPEWIGALYLP-NMPLRPLAEEDLTLQFG-VAWRENDRNETLREFLIPVREH 293 Query: 296 TS 297 + Sbjct: 294 AA 295 >UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q0Q6_PROST Length = 295 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 117/293 (39%), Gaps = 16/293 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + +R F+ + Q N +RAAE++ +T +SI LE+++GYTL R+++ + L Sbjct: 1 MDI---RSLRYFVEVVQLNGFSRAAERLFVTQPAISRSIQKLEQELGYTLLVRENDGVRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPT-IIFDQLISLGDKY 118 G+ L + ++ ++++ + G S + +G+ + D +++ +Y Sbjct: 58 TDEGEILLSHAKQILKQFNSMNKALKEKEGPLSGILNVGLPPVIASTYFADIIMAFSRRY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + +E + +++ + + +++ + +L + RL LVS + Sbjct: 118 PQVELKILELGTHKMMEAMLNGEVETAAVMLPFDNELFDLHVFS-----SDRLMLLVSEQ 172 Query: 179 YEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + L + P++ ++ + G P I R + Sbjct: 173 HPLAMRNSVKFAELIDEPFIFF--SEDFRINELVMSACGIYGKKPVIAGRSSHLDLVTAM 230 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 V G +T++P W L + + L +++N + Sbjct: 231 VRAGVGVTLLPDSMWNKTRADGLSIIPVIEPVLSYEVALATLKNSHQSRRAKA 283 >UniRef50_B0V4K3 HTH-type transcriptional regulator n=13 Tax=Acinetobacter RepID=B0V4K3_ACIBY Length = 299 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 103/292 (35%), Gaps = 13/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R FI +A+ N ++AA K++ + I LEE +G L R + L + Sbjct: 1 MELRHLRYFITVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVRLLNRTKRKVELTEE 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSRE-IVIGIDNTYPTIIFD-QLISLGDKYEGV 121 G+ + + + ++ + IG IF L +L ++ + Sbjct: 61 GEVFLEHARLTLAQADKAVAMARQVSKAKQQLLRIGFVPIAEMKIFPYVLPNLRLQHPDL 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 T + + + L +LD + + + + + L FL+ R + Sbjct: 121 TIELSSLNNAEQLKALKRGELDITFTRDNTENDEIQSQFV-----LTEPLIFLLPRNHPL 175 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + L + ++ + I + GI+ I+ + S + I+++ Sbjct: 176 AKYDHIPVKALHGIDFIIPAAEQSNTLHNTILEFTKTHGIDLNIVQKADSILLNINSIGS 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G T++P + L T+ + + S R + + + + I Sbjct: 236 GLGCTILPAYVAPLGVSNTVV--RPLDVELPSLDLFVSYRKNTESVGVKRFI 285 >UniRef50_A3UQR4 Transcriptional regulator, LysR family n=1 Tax=Vibrio splendidus 12B01 RepID=A3UQR4_VIBSP Length = 301 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 91/250 (36%), Gaps = 12/250 (4%) Query: 1 MDI-FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNIS 59 M + + + +++F LA+ N RAAEK+++ +S+ LE +G LF R + Sbjct: 1 MSLNYEIRHLKHFFALAEELNFRRAAEKLNIAQPALSRSLQKLESDLGVILFIRTTRLVE 60 Query: 60 LNKAGQELYQKLFPV-YQRLSAIDNEIHNSGRRSREIVIGIDN-TYPTIIFDQLISLGDK 117 L AG+ + + A + + + IG N + L + D Sbjct: 61 LTDAGKAFHAGAHQAFLSLIDAEKSAMRVKIGEEGSLRIGYTNFAITGQLPQLLKAFKDS 120 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 Y + + + I++L +LDF + + ++ L +V Sbjct: 121 YPLIRLELIHQFSADQIESLEKERLDFGFITGPLI-----YKGISSFPFQQDPLVAIVPD 175 Query: 178 RYEERQEQE----LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 + + L+ ++ N +F +I R G P I+ Y A + Sbjct: 176 SHPLSHKPSIDLIDLRHESFILGNANNWTHFFKIIQRVCRNAGFMPNIVEEAYDTEAILG 235 Query: 234 AVERGHFLTV 243 V G +++ Sbjct: 236 LVSSGFGISL 245 >UniRef50_A1S338 Transcriptional regulator, LysR family n=16 Tax=Shewanella RepID=A1S338_SHEAM Length = 302 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 114/300 (38%), Gaps = 15/300 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I K + F+ LA+T + RAAEK+H+T K + LE+ L R + +SL Sbjct: 1 MNIP-IKNLHCFVTLAETGSFTRAAEKLHLTQPTLSKMLQRLEDHWQQQLIIRNNQKLSL 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG+ L + + + ++ ++ N G + + +G+ +++ + L + +Y Sbjct: 60 TQAGELLLEHAREMLGQWHLLEEDLSNLRGVQRGYLRLGVCPMMSSLVIELLTAFRARYP 119 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 GV + E+ G L LD + + + LT L L + + Sbjct: 120 GVRLEMFEYGGFGCEKALLANNLDIAFTALPAT----HADELTAQPLTAYPLLACLPAGH 175 Query: 180 EERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + + L P++ ++D+ R G+ + YR + S V Sbjct: 176 KLANKAALDWCDFGSHPFIMY--NQDFALAKLLDSLARNAGVELNVAYRSGQWDFLASMV 233 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNH-RYTATMLQHIAEDRD 294 E L ++P + L + + + R+H T +A RD Sbjct: 234 EANMGLAILPAPICEKLTDKALCFRPLSGG--HTWDLALIWRSHLHLTPAAAAFLALSRD 291 >UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI27_BREBN Length = 307 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 113/293 (38%), Gaps = 17/293 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ + + + +RA+EK+ + S + I LE ++G LF R I+L +A Sbjct: 1 MELRQLEYFMAICEEMHFSRASEKLCTSQSNLSQQIKFLENELGVPLFDRLGKRITLTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 G+ L ++ V+ + I + IG+ ++FD L+ Y Sbjct: 61 GKVLLEQSRHVFSHIDYAREAIAAMKNNEGGTLTIGVLPGDADLLFDALLVEFHRLYPKT 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + +E +++ + ++D ++ E +T+ L V R + Sbjct: 121 SLSVIE--STRIVEQITSGEIDLGVTVLPEPD-----ERITVIPLFHEEFALAVHRAHPL 173 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 +E+ + LQE+ + ++A +I+ G + +++S V++ Sbjct: 174 AKEKAIKFGQLQEVKMVMFPPDHQA--RQLINRYCIQEGFRLQPHIETTTLQSQLSLVKK 231 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTA-TMLQHI 289 G ++P + VN + + H P Q+ R +Y I Sbjct: 232 GIGGCILPSLLLQNVNDDEIAIINLLH-PTPSQDICLVYRKDKYMGFAARTFI 283 >UniRef50_A1K5Q5 Transcriptional regulator, LysR family n=4 Tax=Betaproteobacteria RepID=A1K5Q5_AZOSB Length = 295 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 104/291 (35%), Gaps = 12/291 (4%) Query: 9 MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELY 68 MR F+ +A+T N RAAE++H+ P I LE ++G LF R + L AG+ Sbjct: 1 MRYFVAVAETLNFTRAAERLHIGQPPLSMQIRDLETEVGARLFERSRRKVELTDAGERFL 60 Query: 69 QKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPT--IIFDQLISLGDKYEGVTAQP 125 + R E + E+ +GI ++ P I+ D L + ++ + Q Sbjct: 61 AHARAILARTEEAAEEARRAAAGEIGELRVGITSSLPYTAILPDALAAFRQRHPALRLQI 120 Query: 126 VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQ 185 E D L +LD + ++ + E+ L +V + + Sbjct: 121 HEMFTAEQFDALAQDRLDVGLVR---FDATLAPPHIRVREIGRDALRVVVHAEHPLAAKA 177 Query: 186 EL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 + L++ ++ A++D R G P ++ +I V G + Sbjct: 178 SVSFAELRDADFISFPADAGTELPAILDRLCRGAGFEPRVVQLAREATTQIGLVAAGLGI 237 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAED 292 ++P V ++Y + HR A + +A Sbjct: 238 ALLPAP-LECVRMPRVRYLPVKDAGADF-PLAVACHAHRTRAVTDRFLAVL 286 >UniRef50_C6B5D0 Transcriptional regulator, LysR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B5D0_RHILS Length = 307 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 111/303 (36%), Gaps = 14/303 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ +I+RAA ++++ P G+ I LE ++G +LF R I LN A Sbjct: 1 MELRHLRYFVAVAEEGSISRAAARLNIQQPPLGQQIRDLEYELGLSLFDRHPKKIVLNAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTII--FDQLISLGDKYEG 120 G + +R + + ++ +G ++ + L Y Sbjct: 61 GAVFLADARDILKRAGQAVENVRRYHKGEAGQLSVGFTSSASLHVLAPKLLQQFRLSYPL 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E +I L + ++D + +L + L + + + Sbjct: 121 VKIAVEESETYELILALQEGRIDAALLHI----DANRFPDLASTVLSEEDMIVAIPLGHP 176 Query: 181 ERQE------QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 E ++L+ + R + I ++ G+ P I+ Y +A I+ Sbjct: 177 LADERLGPITLKMLEGQDVVVYRRPDGPGIFERILQSLDRAGVTPAIVDEVYRIVAAINL 236 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRD 294 V G +T++P +++P + Y + + R + + +A +D Sbjct: 237 VAGGRGVTIVPTSMQ-VLHPEAIAYRALAPGQLSPLPLCIAYRRDLKLSIVRNFVALTKD 295 Query: 295 GTS 297 + Sbjct: 296 IAA 298 >UniRef50_B8DQG2 Transcriptional regulator, LysR family n=6 Tax=Bacteria RepID=B8DQG2_DESVM Length = 337 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 92/299 (30%), Gaps = 17/299 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ +A+ + RAA ++H++ P + I ALEE++G LF R + A Sbjct: 1 MELRQLRYFLAVAEELHFGRAARRMHVSQPPLSQQIQALEEELGVRLFDRTSRTVRATPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGI-DNTYPTIIFDQLISLGDKYEGV 121 G+ L + + L A + R + +G + T + + + GV Sbjct: 61 GEALRDDVRDLLAGLDAAVERARGTARGERGRLRLGFVVSAAATRFPRAVAAYRARCPGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + + +LD + E + + + Sbjct: 121 RLELREMGTLLQLRRIESGELDVGLLRNLDGLP----EGFDHAPFLHEPQVVALPAHHPL 176 Query: 182 RQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + L +P + + I A R G +P + + + V Sbjct: 177 ARLGVVPLAALAGVPLILYPRRVFPAAYDAIIAACRGAGFSPEVPQEAVGLNTQRALVAA 236 Query: 238 GHFLTVIPHFAWRLVNPATLKY-------FDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G ++P A + + R R A + + Sbjct: 237 GVGAAIVPASARSEPREGVVYRDVAAGNDVPGGAPGLPYIRLDLVWRAGRDDALLRGFL 295 >UniRef50_B8CTJ9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CTJ9_SHEPW Length = 295 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 113/303 (37%), Gaps = 15/303 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I K + F+ L + N RAAEK+H+T K I LEE +G L R + + Sbjct: 1 MNI-QIKNLHCFVTLVEMGNYTRAAEKLHLTQPTLTKMIQRLEENLGQPLLIRNNQKVIA 59 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG+ L + + + ++++ G ++ ++ +G+ +I + + KY Sbjct: 60 TEAGRALICTSQQIVGQWHRLREDLNSLNGLQTGQLRLGVCPMMGEMIIELVAQFRKKYP 119 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 GV E G L + LD + + + EL L + + + Sbjct: 120 GVELSIQELGGFGAEQALLNDSLDLTFTALPTT----HTQEFDSLELRGYPLLACLPKEH 175 Query: 180 EERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 ++ + L P++ + + +I R + + + + + V Sbjct: 176 PLAEKDNIGWQDLAPYPFILY--NDDFSLTKLIHRLSRSANVELNVAAQSGQWDFIAAMV 233 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNH-RYTATMLQHIAEDRD 294 E + ++P + VN +L Y +P + R + T I R+ Sbjct: 234 EAKMGVAILPKPICQKVNSDSLVYKAL--KPQLTWDLALIWRKNLPLTPAASTFINLSRE 291 Query: 295 GTS 297 ++ Sbjct: 292 LSA 294 >UniRef50_A9F0H5 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F0H5_SORC5 Length = 318 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 107/305 (35%), Gaps = 20/305 (6%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R FI +A+ N RAAEK+H++ SP + + L+E+IG LF + L A Sbjct: 1 MELRHLRYFIAIAEEENFRRAAEKLHVSQSPLSRQMQQLQEEIGAELFAPSGRGVKLTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTI--IFDQLISLGDKYEG 120 G+ L + + + A E + + IG ++ + + L ++ Sbjct: 61 GRLLLDRAKTILSDVDAAAKEARETAEGQIGTVTIGFESGSAYVGPLSTILTRFREQAPR 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V + V S D L Q+ V + +L L RLG +V ++ Sbjct: 121 VNVELVPMSSAQQWDALRAGQISLG-----YGNYVPDDSSLQSVVLARHRLGIIVPEQHP 175 Query: 181 ER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + + L P L ++ I A +R G+ + A ++ V Sbjct: 176 LATKSMIKVKDLANEPMLMDPRKSNPRLYDDIIAAVRARGVTLNVASEILDGEALLTLVA 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTA-------TMLQHI 289 G LT A + T + + M+ R + + + Sbjct: 236 SGFGLTFGAEPAAPFLAVGTAIWKPVSDLGLEMRNIAM-WRPDAQSVLLRPLVDLVREFG 294 Query: 290 AEDRD 294 A RD Sbjct: 295 AALRD 299 >UniRef50_A5FXN6 Transcriptional regulator, LysR family n=6 Tax=Alphaproteobacteria RepID=A5FXN6_ACICJ Length = 306 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 104/297 (35%), Gaps = 17/297 (5%) Query: 1 MDI--FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNI 58 MD + +R F+ +A+T + AA ++ ++ P + I LE +IG TL R N+ Sbjct: 1 MDRTGMELRHLRYFVAVAETLSFTEAARRLAISQPPLSQQIRDLELEIGTTLIARSSRNV 60 Query: 59 SLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLISLGDK 117 SL AG + + +E G + IG+ L++ Sbjct: 61 SLTPAGAAFLTRARQILAEAVRARDEARVIGAGRSGTLDIGMTGAVLLGGLGGLVAAFQI 120 Query: 118 Y-EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVS 176 + GV + E L +LD + L + + ++ Sbjct: 121 FAPGVQVRLHEMPPGEQEAALGAGRLDLCFLRTPGADPA-----LRVEPAWHEGVSAVLP 175 Query: 177 RRYEERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKI 232 R + L++ P++ R + + F + G P I+ A + Sbjct: 176 RDHPLAVRRRLALADLRDEPFVFFRRAD-SRFADHLWTCCIEAGFAPRIVQEVVEAHAVM 234 Query: 233 SAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + V G + ++P A R + P+ L + P L R H +A + + I Sbjct: 235 ALVADGFGIALLPDSARR-LAPSGLGFRPLAGNPARADVSLVYPREH--SAVVGEFI 288 >UniRef50_UPI0001744D79 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744D79 Length = 300 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 107/299 (35%), Gaps = 14/299 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 S+ + F + + + + A + + +T K++ LE G LF R+ L A Sbjct: 1 MESRALAVFAEVVRQKSFSAAGKILGLTQPTISKAVQQLEHDCGCLLFDRQGKKFRLTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIF-DQLISLGDKYEGV 121 G+ +YQ+ + + + +E+ G + +G+ + +++F + S ++ G+ Sbjct: 61 GEVVYQRAQVILKEHERLRDELAGIHGLERGRLRLGLPSLGSSLLFAPHVASFRRQHPGI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + + + +++ +S V E + L L+ + Sbjct: 121 EIELHEQGSLHLQERVRAGEIEVGVSLGPVP------EEFDWQPVSDEPLVALLPAGHPL 174 Query: 182 RQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + E L++ P++ + + A+I R G +P R I+ V Sbjct: 175 ERETSLELADLKDTPFVLF--EPGFSLNAVILDACRQRGFSPVEAARSGHVDFIIALVAA 232 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGT 296 G + ++P + + L R + + + ++G+ Sbjct: 233 GLGVALLPRLIVNSREQRVCTVVPLRDEDLRWRLGLIWRRGGDLSPAARRWLEVVQEGS 291 >UniRef50_B1M8F7 Transcriptional regulator, LysR family n=4 Tax=Rhizobiales RepID=B1M8F7_METRJ Length = 304 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 110/297 (37%), Gaps = 15/297 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F +A+ + AA+ + ++ P + I LE +IG LF R + L A Sbjct: 5 MELRHLRYFAAVAEHLSFTAAAQSLGVSQPPLSQQIRDLEVEIGVNLFERSSRRVVLTAA 64 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFD-QLISLGDKYEGV 121 G++ V ++S + G + + IG+ ++ + + ++ V Sbjct: 65 GEDFLGNARAVLAQVSDAVDRARTIGTGAAGILNIGMTSSVLAGPAGCLIRAFEQRFRAV 124 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + I L + D +L P RL V R + Sbjct: 125 DVRIHEMAPTDQIAALKANRTDLSFLRSPPEDP-----DLVAHMAWPERLCVAVPREHAL 179 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 ++ + P + + + + F A I G P+I + + I+ V Sbjct: 180 AAGRSVAIDVFRSEPLISLGLE-SSRFAADIYHACIQRGFTPSISQQVNEASSLINLVAA 238 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRD 294 G L +IP F R +P + P +P ++ +Y++ + R + +A R+ Sbjct: 239 GFGLAIIPEFVGRARHPDVVV---LPIKPSFLSADVYALHHTRRNPVIDNFLALIRE 292 >UniRef50_C1PEC2 Transcriptional regulator, LysR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PEC2_BACCO Length = 304 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 102/289 (35%), Gaps = 12/289 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M +++ FI +A+ ++ AA+++H+ S + I+ LE ++G +LF R+ N+ L Sbjct: 1 MIRMELRQLIYFIEVAKREHVTHAADELHVAQSAISRQISLLEAELGVSLFWREGRNVRL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYP-TIIFDQLISLGDKY 118 G+ + V + +H + + +G L +K+ Sbjct: 61 TPIGKVFLEHAEKVVLEIDKAKQRMHEFLDPDNGTVRLGFSTGLSVQTFSSLLAQFREKH 120 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 G+ Q V+ + + +I + + +L+ ++ + ++ L +L L R Sbjct: 121 PGLEYQFVQGTPSYLIRLIENGELELALASPVPD----DHPAVSGEILYMEKLMLLFRRD 176 Query: 179 YEER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + L+ ++ R + ++ A R G P I + Sbjct: 177 HPLSGQKMIRLAQLKNERFITFR--EGFSIREILFAACRKSGFEPAIAFEGEDMETIKGL 234 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTA 283 V G + ++P A + + + + + A Sbjct: 235 VASGTGVAILPEPALLFNLSEEIVKAEISDMELMRPVGVMIPKKREMAA 283 >UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=Veillonellaceae RepID=D1BNW2_VEIPT Length = 307 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 95/296 (32%), Gaps = 16/296 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++ F+ +A + ++AA +H++ S ++I ALE+++G LF R ++ L Sbjct: 1 MDFHHLKYFVEVADQKSFSKAARNLHISQSAISRTIKALEDELGVVLFMRNAKSVELTDG 60 Query: 64 GQELYQKLFPVYQRLSAIDNEI-HNSGRRSREIVIGIDN-TYPTIIFDQLISLGDKYEGV 121 G V + + + I IGI T I L Y + Sbjct: 61 GTIFLTHAKRVVFMFEHLKTDFENEFRLEQGSIRIGIPPITDAPIFAQLLGEFKKVYPQI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E V ++ + +D I + + E LT L ++ + Sbjct: 121 ELELYEQGSKKVEISVQEGLIDIGIICTKPNPKEFESFYLT-----SDPLSVIIPKSSPL 175 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 E+L + ++ ++ N I + G P I++ + V Sbjct: 176 AKEKEIRLEMLADESFVL--HKDDFNLHDEIIKACKHTGFQPHIVFETSQRDLMLQTVSA 233 Query: 238 GHFLTVIPHFAWRLV---NPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 + ++P V K P P + + Y + + Sbjct: 234 NLAIALLPSRLCPEVGENTEVGSKVVVRPLVPEIIHTLYVIWKKGHYLSHASRLWL 289 >UniRef50_B1FZF1 Transcriptional regulator, LysR family n=1 Tax=Burkholderia graminis C4D1M RepID=B1FZF1_9BURK Length = 312 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 97/294 (32%), Gaps = 13/294 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++R F+ A N RAA +HMT P + I LE+ +G LF R + L Sbjct: 1 MLDLGQVRCFVAAATELNFRRAAALLHMTQPPLSRQIQLLEDNLGVKLFERIGRTVKLTT 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFD-QLISLGDKYEG 120 G+ + ++ + + + + + +G + L++ D Sbjct: 61 EGRVFLADATRLLNLAEQAESTVRRASKGKTGRVRLGFTGAAGYELIPELLVAAADVLPE 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + +E I+ +D +Q + L + L + RR+ Sbjct: 121 IDVVLLELVSAAQIEAFAANAIDLGFLR-----PLQSRQKLEFLLVDEEPLIVALPRRHA 175 Query: 181 E----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 R E + L E P++ F I + G+N I +S V Sbjct: 176 LCQFERIELKQLDEQPFIMHSPAQGKYFHDRIMGMLAAEGVNLNIAQYIDQTPTILSLVR 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 G L ++P A R + +++ + E + R + + Sbjct: 236 AGLGLAILPASAQRF-HYDNVEFRHIAGNTI-HAEMSMAWRADQDNPAVTAFRL 287 >UniRef50_Q13JN6 Transcriptional regulator, LysR family n=7 Tax=Burkholderiales RepID=Q13JN6_BURXL Length = 312 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 107/293 (36%), Gaps = 14/293 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + K +R F+ LA+T + RAA +++++ P + +AALE +G TL R +++L Sbjct: 25 VIDIKPLRYFVTLAETRHFGRAAARLNLSQPPLSRQLAALEASVGVTLVERSPRSVTLTA 84 Query: 63 AGQELYQKLFPVYQRLSAIDN-EIHNSGRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEG 120 AG+ Y + + + + + ++ IG + G + Sbjct: 85 AGERFYADAKAILTAVEQAVSNAQAAAQGEAGKLAIGFTMCAAYSVVPGYARVFGAAFPE 144 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V E N + + + +D I +V + L + L +SR + Sbjct: 145 VALNLREVVSNDLAEQVLAGHIDAAIMFPNVPDK-----GLATRTIVSEPLCVALSRSHP 199 Query: 181 ERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + + L L P++ + A I + R G P I + +S V+ Sbjct: 200 RARARRLKIAQLAGEPFVLASGEVAPTLRATILEHCRSGGFEPDIRFEVQLQQTVLSLVD 259 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G + ++P R A + + P+ Q + + + + + Sbjct: 260 EGVGVALVPASM-RKAQLAGVVFRPLVDAPLIEQ--VLAWSPANRNPCLARFL 309 >UniRef50_O33945 Probable cat1 operon transcriptional activator n=9 Tax=Proteobacteria RepID=CATR_ACILW Length = 303 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 100/293 (34%), Gaps = 12/293 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++ R F+ +A+ N RAA ++++ P + I LEE++G L R + L A Sbjct: 1 MDLRQFRYFVAVARERNFTRAARQLNIAQPPLSRQIQLLEEEVGVPLLIRNSRPVQLTDA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G+ +++ V R+ + G + + IG + + L+ L + Sbjct: 61 GRLFFEQAIQVLGRVEQMQAATRRVGLHQRSVLSIGFVASTLYGVLPTLMRKLRQHAPEL 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 Q VE I + + ++D H S N++ L RL + Sbjct: 121 DIQMVELMSVQQIQAINEGRIDIGFGRVHHSDP-----NVSSIVLHEERLAVALPMESPM 175 Query: 182 RQE-----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 +E L + + R F + + + P + + V Sbjct: 176 ARESTPLPVHQLAGEKLIVYPKEPRPGFADQVLNILDRHDVQPGQVMEVREIQTALGLVA 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + VIP A ++ + + D + + + +Y + Q I Sbjct: 236 AEFGVCVIPASARQMRHDVHYRLIDGDRATSPVIVSHRANDSSKYISLTKQLI 288 >UniRef50_B6AZI7 Transcriptional regulator, LysR family n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AZI7_9RHOB Length = 301 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 39/296 (13%), Positives = 94/296 (31%), Gaps = 13/296 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + R F+ +A+ + RAA+++ + ++I +E ++G TL R + + L Sbjct: 3 IDLRHFRCFVAVAEELHFHRAAKRLGVAQPALSRTIKTMENELGVTLLERSNRRVELTHV 62 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGID-NTYPTIIFDQLISLGDKYEGV 121 G+ + I ++ + S + IG N + L + + + Sbjct: 63 GEIFLTGCRKCLEHSERIIEDMQRVQQGSIGTLRIGYTENAMNGQLPSLLKAFKGQTPDI 122 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + + L D +D + +++ + R +V + Sbjct: 123 SLVLTHSVTSEQVSQLEDGSIDLGFATGNLAK-----TGFESIRIQSERFVCVVYDSHPF 177 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L E P +Q + ++ + ++ R G P I + V Sbjct: 178 ATRSSICLSELAEEPMVQGARAHWQHYYSRLEPLFRTAGFEPKIAQEGLTTTDIQRLVAC 237 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 G + ++ + P+ L + + T + ++ R Sbjct: 238 GIGIAILTETVVDCL-PSGLAVLPIEDVTDCLDTIAV-WPAKQNTVAKDRFVSFLR 291 >UniRef50_A0B0U5 Transcriptional regulator, LysR family n=18 Tax=Proteobacteria RepID=A0B0U5_BURCH Length = 302 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 92/293 (31%), Gaps = 15/293 (5%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++R F+ +A+ + RAA ++ MT P + I LE +G L R +SL Sbjct: 1 MIELHQLRCFVAVAEELHFGRAARRLFMTQPPLSRQIQLLEHALGIALLERSSRQVSLTA 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPTIIFDQLISLGDKY--E 119 AG+ + + + + + + I +G + L++ + Sbjct: 61 AGERFLRDARHILEFSARAEQAAQRVAHGGAGRITLGFTAVSAYRMIPVLLA-HAAHALP 119 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V + E ID L R LD Q + + L + + V+ Sbjct: 120 DVDVELREMVSTVQIDALASRMLDAGFVRQRAAR-----QPLEYRLVQREPMLVAVAEGA 174 Query: 180 EER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + L P++ F MI G P ++ + V Sbjct: 175 PLAAYEQIGPDELDRQPFIAYSPNEGKYFHDMISGMFAGAGRLPNYLHYVGQTHTILGLV 234 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G ++P A R ++ + + + Y + R + Sbjct: 235 RAGLGAALVPASA-RELHVDGVVFRPLAGVNAAAELY-LAWRADNDNPALPVF 285 >UniRef50_Q213Z8 Transcriptional regulator, LysR family n=2 Tax=Rhodopseudomonas palustris RepID=Q213Z8_RHOPB Length = 297 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 92/293 (31%), Gaps = 12/293 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 MR+ + +A+ + RAA +++M P +SI LE +G+ LF+R + L A Sbjct: 3 IDLHHMRHLVAVAEELHFGRAAARLNMAQPPLSQSIKRLELALGFALFSRTQRRVELTPA 62 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSREIV-IGIDNTYPTIIFD-QLISLGDKYEGV 121 GQ + Q+ + + + + + + L + D++ V Sbjct: 63 GQVFLAEARRTLQQADETVRLARRAAAENLAELAVTFTSAALYRVLPTALRAHRDRFPSV 122 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + I L D +D + A L + + R V Sbjct: 123 EIRLDERPTDAQIAGLQDGSVDVGFVTPPLKA----FSGLELEVISRDRFALAVPISSPF 178 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 Q L ++ + + + R G P + S V Sbjct: 179 AQRDAVALHELATEAFVLFPYVQGPALHGRLMSACRQAGFLPRVRQEARQMHTIFSLVAA 238 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPM-YMQEYLYSIRNHRYTATMLQHI 289 ++++P A R + + P+ + + + + I Sbjct: 239 EMGVSLVPEGA-RSMRVEGVTMVALSDFPVDLTWDLSIAWKPKGAGRPLRAFI 290 >UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=Actinomycetales RepID=Q2J7C4_FRASC Length = 316 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 93/291 (31%), Gaps = 15/291 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++ F+ +A+T + RAA+++H+ + I ALE+++G LF R NISL A Sbjct: 1 MQLHQLAYFVAVAETRHFTRAAQRVHVAQPSLSQQIRALEQELGTPLFNRARGNISLTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTY-PTIIFDQLISLGDKYEGV 121 G+ L + + R + +G + + D L +Y G+ Sbjct: 61 GETLLPLARRILTDTETARQRVTELLDLRHGTVRLGATPSLCTGFLPDVLRLFHQRYPGI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE- 180 E ++ +L LD + + + L S L L + S Sbjct: 121 RLLVEEGGSRDLVRDLAAGSLDLALIILPLQSSDPA---LATSPLIRESLVLVSSLDEPP 177 Query: 181 ----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 L+ P + R + R G P A + V Sbjct: 178 IVAGRPLTVADLRNHPMVMFRR--GYDLREATVTACREAGFEPIFAIEGGEMDAVLGFVA 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 G VIP + ++ + L R+ T ++ Sbjct: 236 AGLGSAVIPSTVAHRL---GMRVTPFVLPGLQRTIGLARRRDVEPTRAAVE 283 >UniRef50_A4EJ78 Transcriptional Regulator, LysR family protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EJ78_9RHOB Length = 294 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 100/292 (34%), Gaps = 13/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++ + F +LA+ + RAAEK+H+ I ALE +G TLF R + L A Sbjct: 1 MTLRQFQIFTVLAEELHFGRAAEKLHLAQPALSNHIKALEYDLGVTLFHRTTRRVRLTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVI-GIDNTYPTIIFDQLISLGDKYEGV 121 G+ + + A G + + + G+D+ ++ + S V Sbjct: 61 GEAFLPEALATIAQAEAAVRITRAMGETGADTLKLGGVDSATAGLLPSVIRSFRLARPEV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + L + LD + +++L+ L + + ++ + Sbjct: 121 ALKVFEMLSGPAFNMLESQALDIAFVRKPP-----HVDHLSSRHLMSEPVMVALPAQHPK 175 Query: 182 RQEQE----LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 ++ ++E + +R +I +R + P I+ I+ V Sbjct: 176 ARQHSISTADIREEQLVMSSRASRPILFDVIMDYLRNRDVTPNILQEATERHMIIAMVAS 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G ++++P + + + E R T+ + Sbjct: 236 GLGISLVPKWVSNF-RREDVVFLPLDDGG-PAVEVHAVWRTGEQLQTVHDFL 285 >UniRef50_B7WRI3 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WRI3_COMTE Length = 307 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 103/293 (35%), Gaps = 12/293 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + K++RNF+ LA+ + RA+E++H+ P SI LE ++G LF R ++L Sbjct: 1 MMDLKRIRNFVTLAEAGSFRRASERLHLAQPPLSVSIQKLEAELGTRLFDRGPAGVTLTV 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIF-DQLISLGDKYEG 120 AG+ + ++ + + H++ + IG T + L + +Y Sbjct: 61 AGESVLREAKRLLFFERQVITAAHDAISGIGGTLRIGFVGTTTFGMLQRLLPAYRAQYPA 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V + E +++ L LD + V A + T+ L L + + + Sbjct: 121 VELKLQEAPSVSIVEQLEHGSLDLGLVRAPVMA----ATSTTLVSLERESLIAALPKDHF 176 Query: 181 E----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 L +L + +++ A + G P I ++ VE Sbjct: 177 LAKHTAIRLNDLSGEAFLMYAEGAATSLRSLVMAACQRAGFIPRITQEATQVQTILALVE 236 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYL-YSIRNHRYTATMLQH 288 G + ++P R + Y + L + ++ Sbjct: 237 SGLGVALVP-SVMRRYASDVIAYREISDLGHDSWMGLSLAYMADAEPPAAVKF 288 >UniRef50_P20667 HTH-type transcriptional regulator catR n=15 Tax=Bacteria RepID=CATR_PSEPU Length = 289 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 105/288 (36%), Gaps = 13/288 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F +LA+T N RAAE +H+ P + I+ LE+Q+G L R+ + L +A Sbjct: 1 MELRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVRE-RPLRLTEA 59 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSRE-IVIGIDNTYPTIIFDQLISLGDKYEGVT 122 G+ Y++ V +L I + G+ R+ + IG + + +LI + + Sbjct: 60 GRFFYEQSCTVL-QLQNISDNTRRIGQGQRQWLGIGFAPSTLYKVLPELIRELRQDSELE 118 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 E + ++ L ++D + + L L ++ + + Sbjct: 119 LGLNEMTTLQQVEALKSGRIDIAFGRIRIDDPAIHQQVL-----CEDPLVAVLPKDHPLA 173 Query: 183 QE---QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 L ++ R ++ + A G++ + I V G Sbjct: 174 SSPLTLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIHVSQWANELQTAIGLVAVGV 233 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 +T++P + ++Y + + S R + + + Sbjct: 234 GVTLVPASVQQQHRTD-IEYVSLLDSGA-VSPIILSRRKGDVSPIVQR 279 >UniRef50_P37499 Uncharacterized HTH-type transcriptional regulator yybE n=4 Tax=Bacillales RepID=YYBE_BACSU Length = 292 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 105/291 (36%), Gaps = 15/291 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F LA+ ++ +AA+ + +T +SIA LE +G LF R+ +ISLN+ Sbjct: 1 MEWEQLEYFQTLARMQHVTKAAKSLSITQPALSRSIARLENHLGVPLFDRQGRSISLNQY 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 G +++ + + + EI + +G +T T + LI S +Y + Sbjct: 61 GHIFLRRVQAMMKEYTEGKEEIQALLKPDQGVVSLGFLHTLGTTLVPDLIGSFQQEYPNI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + Q + +++ L LD + A ++ + +L L V + Sbjct: 121 SFQLKQNHSYWLLERLKSGDLDLCLL-----ASIKPENPIQWIKLWSEELFVFVPNDHPL 175 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + + + ++ + + +D I P I++ V Sbjct: 176 ASRESITLNEIAGERFILL--KKGYALRMTVDELFEKANIQPNIMFEGEEATTAAGFVAA 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G ++++P + ++ + + + I+ + Sbjct: 234 GLGISILPD--LKGLDQSKITKIRVSWPECQRVIGIAWIKGRFLSPVAETF 282 >UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepID=A9WGB3_CHLAA Length = 304 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 106/296 (35%), Gaps = 15/296 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F+ +A+ +I RAAEK++++ + I LEE+IG LF R I L A Sbjct: 1 MELRQLRYFLAVAEEGHITRAAEKLYISQPALSQQIKLLEEEIGTVLFDRIGRRIRLTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQL-ISLGDKYEGV 121 G+ L Q LS I G + + IG+ T + L + + Y + Sbjct: 61 GEILVAHARRALQELSEAQVAIDELNGLQRGMLRIGVVQTVNAYLMPDLVAAFTNAYPAI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + Q E + + L D L I E +T EL L +VSR++ Sbjct: 121 SLQIEELATRDIEQRLADGDLQIGIGFVPP-----ETAGVTGEELFSEDLVVVVSRQHPW 175 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 +L L + P + + + D GI P + + + ++AV + Sbjct: 176 ADLPQLPVQSLHQQPLILL--STTFCTRRLWDRCTHIAGIQPRVQIEMNTIGSILAAVRQ 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 TV+P L L N A +A R Sbjct: 234 LTLATVLPAMVLS--GQPDLVGIPLVDPTPRRTVGLLFRHNAYRCAATRAFVAMTR 287 >UniRef50_Q6FDZ3 Putative transcriptional regulator n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FDZ3_ACIAD Length = 307 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 106/291 (36%), Gaps = 12/291 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + K+ F+ + + +NI+RAA ++HM P + I +LE+ + TL R + + + Sbjct: 1 MIDIHKLNAFVAVVEESNISRAANRLHMQQPPLTRLIQSLEQDLNTTLLKRLPRGVEVTE 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP--TIIFDQLISLGDKYE 119 AG+ LYQ+ + S+I + N + +I IG ++ + L +K+ Sbjct: 61 AGKVLYQEAVTILAHASSIPQRVQNIAQGKEGQINIGFTHSIGLHPFLPTLLRHFREKFP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V+ E S + + D + + +LD + + + + + L + + Sbjct: 121 AVSIHLEEDSSSALTDAVINEKLDIVFLRKP----APKHTAVQTMHVLNETLIVALPSNH 176 Query: 180 EE-----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 L+ ++ R + I AN G +P I+ + ++ Sbjct: 177 PLAMQQGAIHLPDLEPYEFVLYRRLAGQDLFDNILANCYQAGFSPNIVQEAPRLTSSLNL 236 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATM 285 + G L+++P N + +P Y Sbjct: 237 IAAGIGLSIVPASIQDFWNKQIIYRPLEAKKPCIAPIYAIYSAKDNNIRVA 287 >UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQV8_9BACT Length = 300 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 98/298 (32%), Gaps = 14/298 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++R F+ +A+ N RAAEK ++ I LE ++G LF R L +A Sbjct: 1 MELHQLRYFLAVAEAGNFTRAAEKCFVSQPSLSAQIIKLEGELGQKLFNRLGRRAELTRA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISL-GDKYEGV 121 G L + + + + +I + + +G+ + + +I + ++Y + Sbjct: 61 GTFLESRARTILMEVENAERQIKENEEDIRGIVKVGVTPSVTPYLIPPVIRMCRERYPNL 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E +ID + L+ IS + N+ + L VS+ + Sbjct: 121 EINIQENLRRRLIDEVQQGHLEVAISSY-----TGDAANIDAEPILQEDLVLAVSKTHRL 175 Query: 182 R-----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 E ++ P + + A + I P ++ + V Sbjct: 176 ATQKSKVSIEDFKDEPLVLL--GESATLGDKVFDFFDKMNIEPKVVALCSQVRSVKEMVN 233 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRD 294 G + ++P A P + Y M + + + + R+ Sbjct: 234 LGLGVAILPAMAKEEHLPFEIVYRSLVSERMKRLLFALTHSRRYLSPGARVFVDLIRE 291 >UniRef50_C6XZC9 LysR substrate-binding n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XZC9_PEDHD Length = 300 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 105/295 (35%), Gaps = 14/295 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + + F +LA+ + +AAEK+ ++ S + I LE+ I +LF R + ++L+++ Sbjct: 8 IELRHLVYFKMLAEELHYRKAAEKLFISQSALSQQIKQLEQLIQISLFDRSNKKVALSES 67 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFD-QLISLGDKYEGV 121 G+ LY+ V ++ + + + ++ IG + + L + + + Sbjct: 68 GKSLYKDAVQVLNKVESALTNLELIKIGNTGQLRIGFVASAMQSVLPGLLKNFHKECPNI 127 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 Q E + + L + +LD + + I + ++ + + Sbjct: 128 KFQLDELNNREQLMALKNEELDLGFMRSNHVDAGYD-----IRSVYKETFSLVLPQNHPI 182 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 E +E P++ + I G P I +R VE Sbjct: 183 NAETFINIGQFREEPFILFPNDQSQLYYQQIINLCADQGFAPKIAHRSIHAPTIFKLVEY 242 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRN--HRYTATMLQHIA 290 G ++VIP +K+ + + Y + + +L+ + Sbjct: 243 GMGVSVIPTSLA-HTENKEIKFIELKKITQRTELYAVWKKKSQNPALPHLLEMLI 296 >UniRef50_Q0RXH6 Transcriptional regulator, LysR family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RXH6_RHOSR Length = 290 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 99/292 (33%), Gaps = 15/292 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + ++ F+ +A+ + RAA+ ++M P + I LE+ + LF R ++L Sbjct: 1 MEIRHLKYFLAVAEHLHYGRAAKSLNMAQPPLSQQIRRLEKILQMELFDRSSRRVTLTNE 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSG-RRSREIVIGIDNTYPTI-IFDQLISLGDKYEGV 121 GQ L + V + +N + ++ IG + + +L Y Sbjct: 61 GQFLLEAAREVVGQSDHFENLAKALRMGEAGQLRIGFAASAMNWGLGTKLRQFRTAYPEA 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + S L D ++D + ENL + +L L ++ + Sbjct: 121 DVIAHQMSVADQATALQDDRIDLAFTVG-----GLNYENLQVVDLDEEPLRAVIPSDHPL 175 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L ++ RF + + E +I + G P I ++ + V Sbjct: 176 AGMETVRLADLSHETFVGYRFDD--HLEDIIASACYRAGFTPKISFQGAQSHTLLHMVSA 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G L ++P R + + + D P+ R T + + Sbjct: 234 GFGLGLLPACDAR-MGADGVVFIDL-EPPVPTMRISVVRHWRRLTPLAERML 283 >UniRef50_A6TWD6 Transcriptional regulator, LysR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TWD6_ALKMQ Length = 305 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 105/298 (35%), Gaps = 14/298 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI +++R FI +A+ N AA+ + + S + IA LE +I LF R ++ L Sbjct: 1 MDI---RQLRYFIAVAEHLNFTEAAKHLFVAQSAVSQQIADLENKIEVKLFDRNKRSVKL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLIS-LGDKY 118 AG L ++ + R + + + IG LI Y Sbjct: 58 THAGGVLLKEAIDIVSRAEEAVIKTQEAELGIIGSLKIGFLGYTEKNFLPFLIRGFRRNY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + + Q +++ +ID+L +LD + +S + + L L + ++ Sbjct: 118 QNIDLQLDQYNHGILIDSLSTGELDIGFT---LSFGLDNIGGLEKRSLFTEPISIVMHCD 174 Query: 179 YEERQEQE----LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + L + ++ + G +P I+ P + Sbjct: 175 HPLAHQSSINLGDLAQERFIALNRHESPQGFNQTLLICANKGFSPNIVSGPKLLHTVLLL 234 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAED 292 V+ + ++P +L++ D + E + + + ++ + E Sbjct: 235 VDAEMGIAILPKS-LEHHASPSLRFIDIEGEAVQH-ELVVAWKTSNQNPSIPLFLKEL 290 >UniRef50_A1SFE6 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=A1SFE6_NOCSJ Length = 305 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 92/291 (31%), Gaps = 14/291 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R + LA+ + RAA ++H+ + + LE ++G LF R + L +A Sbjct: 1 MELRHVRYALALAEERHFGRAAARVHVAQPALSQQVKQLERELGVELFRRTTRRVELTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 G+ + + + ++ + +G T + ++ + V Sbjct: 61 GRRFAEHARGILAGVDRAREDLALLASGRAGRVSVGFVGTATYDVLPRVAHEVHRALPDV 120 Query: 122 TAQPV-EFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 Q E ++ L D D + + L + L L +V + Sbjct: 121 DLQLRGESLSPRLLAGLADHTFDLALLRP----DPLGGDGLVVRTLRAEPLVAVVPTGHP 176 Query: 181 E----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 R + L ++ +R++ + G PT + + V Sbjct: 177 LAGQRRIDLAELAGESFVVHPSAHRSSIHERVLQACADAGFVPTSLLEVAETATMVVFVA 236 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 G + ++P R + + Y P + + R + + Sbjct: 237 AGLGVALVPEPV-RSLGLEGVSYVGLTDPPTI--DLALAGRRDESSPAVRN 284 >UniRef50_Q39JP1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=Q39JP1_BURS3 Length = 300 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 100/300 (33%), Gaps = 14/300 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 K++R F+ LA+ + RAA+++ + I ALEE++G LF R + + L+ Sbjct: 1 MELKQLRAFVTLAEELHFGRAAQRLFIVQPALSMQIKALEEELGARLFERDRHKVELSDT 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQ-LISLGDKYEGV 121 G+ + Q+ + + S R + I ++ ++ L ++ ++Y + Sbjct: 61 GRVFLPEARATLQQAARAEQMARLSSRGEIGTLRIAFVSSVLPVLLPAVLRTMRERYPLI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 T + + I L DR++DF + + + + + + Sbjct: 121 TLELKDLPTPDQIAALRDRRIDFGMIRLPAA-----YAGIDTRVVLEEGFVVALPLDHPL 175 Query: 182 ----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L+ P + + F + + G I F ++ V Sbjct: 176 AAHDAISPAALRGQPAFVLARRYAPGFHDDMLLALSRAGTTLEIAQEFGEFTTMLALVAA 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 G + +IP A + P + L + +A T+ Sbjct: 236 GMGIGLIPAEAASAL-PPNVLARPLDLAGHRTGIGLAWT--DLDSPLKRAFVAALEQVTA 292 >UniRef50_Q0S8J9 Transcriptional regulator, LysR family protein n=5 Tax=Actinomycetales RepID=Q0S8J9_RHOSR Length = 298 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 99/296 (33%), Gaps = 16/296 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I ++ F+ +A+ + RAA+++H P ++I LE+Q+G TLF R N+ L Sbjct: 1 MEIS---QITAFLAVAEELHFGRAAQRLHSAQPPLSRTIRQLEKQLGATLFERNTRNVRL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLISL-GDKY 118 AG+ L + + + +GR + IG ++ + L + Sbjct: 58 TSAGEALLGPAREILDACRLAEIAVAAAGRGQVGRVRIGFAGVSSHLLIGRWAKLVRHTH 117 Query: 119 EGVTAQP-VEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 G+ + ++ L D LD + + + + + Sbjct: 118 PGIEFVLDSSAFASEALNKLLDGTLDIGLVRWIFTPP-----GIASRVILNEDFVVALPT 172 Query: 178 RYEER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 + E L PW+ + + + G P I+ MA ++ Sbjct: 173 DHPLAGRDGVRIEELSTEPWVTLPADPGSALRDSLQRAAHDAGFTPRIVQSAPDSMALMA 232 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V + VN + + P +Q + R A + + + Sbjct: 233 LVSAEVGCALTVSSVAENVNNPDVVFLPLVGGPSTLQ-LRIAWRADDDNAALREVL 287 >UniRef50_A8I2H0 Regulatory protein n=2 Tax=Rhizobiales RepID=A8I2H0_AZOC5 Length = 321 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 92/288 (31%), Gaps = 13/288 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ A+ N RAAE++ + + I LEE +G LF R + L A Sbjct: 12 IELRHLRYFLATAEELNYRRAAERLRIAQPGLSQQIKKLEEIVGTPLFDRTRRTVRLTLA 71 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPT--IIFDQLISLGDKYEG 120 G+ + + +GR I IG + ++ + Y Sbjct: 72 GELFMHEARKTLAHAESAMLVARRAGRGEVGRIAIGYVGSAAYTGVLTTMVGKFRSSYPE 131 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V Q E +D L +LD V V + + + + + Sbjct: 132 VELQISEMEMQQQLDQLDQGRLDIGFIRPPVPLPV----GIGTIPVLFEDIVLALPEAHP 187 Query: 181 ----ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 E+ L E ++ +F + R G P + + F+ S V Sbjct: 188 QGASEQVALASLNEDIFITPHHPPEVSFLKHTTSACRMAGFFPRLGPQGRDFVTIASMVA 247 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTAT 284 G + ++P R + L+Y + E + R + Sbjct: 248 VGLGVALVPQSV-RCIQVPGLQYRPIADA-KVLAELAVAFRRSEPSPV 293 >UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BX95_LISGR Length = 297 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 103/291 (35%), Gaps = 12/291 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++++ F+ +A ++ +A+E +H+ S + I LEE++G LF R N+ L Sbjct: 1 MELRQLKYFMEVASFEHMTQASENLHVAQSAVSRQITKLEEELGIKLFDRVGRNMQLTTV 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLI-SLGDKYEGV 121 G++ ++ Y L + + S + IG+ N+ + + +I + +Y V Sbjct: 61 GEDFLNQVKVAYNELLKAEAIVTEYSDPTKGSVRIGLPNSLASKVLPAVISAFRAEYPDV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 T VE S + L D ++D +++ + +L + + Sbjct: 121 TYHFVEGSNAELKQLLLDGEIDITFLSPVPVTD----DSVEAVKFFDEKLKVIFPATHPL 176 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 E L ++ + ++ I+ I ++ F V Sbjct: 177 ADRYNVSLEELAAEKFILYP--PNFDLFKIVTTAAEKKAISLDIAFQSQDFYTIQGLVGA 234 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G ++++P K ++ + L + + + T Sbjct: 235 GLGISILPEMILDGTIFKDTKALPLRNKELRRSVGLVVTKKRQLSPTEKLF 285 >UniRef50_C6PMR8 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMR8_9CLOT Length = 297 Score = 242 bits (620), Expect = 7e-63, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 108/295 (36%), Gaps = 15/295 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M+I ++ + LA+ + ++AAE++H++ S K I+ LE ++G LF R +I L Sbjct: 1 MNIDT---LKYVLALAEYQSYSKAAEEMHISQSSLSKQISKLEGELGVKLFDRTTRHICL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTI-IFDQLISLGDKY 118 AG E + + + + + + E+VIG + ++S KY Sbjct: 58 TVAGSEFLRHAAKILNDIDEAEKAMQEYCIIQRGELVIGTIPVICYFGLASLIVSFQKKY 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 G+ + E +I + ++D + + + + + + + Sbjct: 118 PGIKLKLKEAETKLLIQLRKNLKIDAAFVT--FTDDTELNSTFELFPIITDHIVLVTPQF 175 Query: 179 YEER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + + + ++ M N + + + G P I+Y + Sbjct: 176 HPLAAYKSVDFKDIANEKFVSM--TNNSLATEIFINACKKAGFTPDIVYESDHIDMIVGF 233 Query: 235 VERGHFLTVI-PHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 V G ++++ A + +K + + + + L + + T + Sbjct: 234 VSGGLGVSLLTSQIAKKFTKGNNIKIVNLNEK-INITIALAIPKENNLTPGIRTF 287 >UniRef50_A1SEX2 LysR, substrate-binding n=11 Tax=Actinomycetales RepID=A1SEX2_NOCSJ Length = 330 Score = 242 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 98/289 (33%), Gaps = 16/289 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F +A+T + +AAE++ + ++I +LE ++G TLFTR +++L A Sbjct: 25 MELRHLRYFTAVAETCHFGQAAERLLIAQPALSQAIRSLESELGVTLFTRTTRHVALTPA 84 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G+ + + + + + + +G+ T T L+ L + V Sbjct: 85 GEYFFDESRRILAAVEDSTRGVRQLADGRHGLVRLGLVGTAATSHLPHLVRTLKRELPEV 144 Query: 122 TAQPV-EFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + + D L +D + V E+ + L + + Sbjct: 145 AVDVKADILTPELCDLLRAGAIDVAVLRPPVVGEGIEIHVVE-----EEPLILALPESHA 199 Query: 181 ERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 E L+ P++ Q + + R P + +S V Sbjct: 200 LAARGDLGVEDLRNEPFISYAAQE-SAVNQAVLRACRTADFVPHRSHEAPGTAVLLSLVA 258 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATM 285 G ++++P R + + + + + R+ R + Sbjct: 259 AGLGVSLVPASV-RAFPLTGVVFREVLDAGTI--QLALAWRSDRPRPVV 304 >UniRef50_C6PVA1 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PVA1_9CLOT Length = 308 Score = 242 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 114/290 (39%), Gaps = 9/290 (3%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI K+++ F+ +A+ + A++K+H+ P + LE +IG L R L Sbjct: 1 MDI---KQLKYFLTIAREGTLTNASKKLHIAQPPLSYQLKMLENEIGIKLIERTTRKSQL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQLISLGDKYE 119 AG+ LY + + + + E+ + + + IG + +I+ +++ Y Sbjct: 58 TDAGKFLYNRSEKIVELVETTLKELKDFNKGIEGTLAIGTIASTASILPEKINDFHKLYP 117 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V Q E + ++D L + + I ++ + ++L+ + +S Sbjct: 118 KVNFQIREGNSTRILDLLNNGIIQIGIIRCPFDSKNLKYKSLSKEHMLAAIHSNFLSSTK 177 Query: 180 EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 +++ L+ LP + F++MI P I + ++ G Sbjct: 178 KKKISLIELKNLPLIIHVR-----FKSMIVDACSGLNFTPNIFCETDDVRSMLTWATTGM 232 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + ++P L+ L Y + + + + +L + N + TM + Sbjct: 233 GIAIVPKSTVNLIPNINLTYKEITNPNLVTETFLVWLNNSYMSNTMKNFL 282 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 97/293 (33%), Gaps = 17/293 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R FI +A+ N +AAE +H+ ++ LE+++ +LF R+D +SL Sbjct: 1 MDVRQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSLTAE 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLIS-LGDKYEGV 121 G+ + L A + E+ G E+ +GI F +I Y + Sbjct: 61 GEIFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISAYFFPDIIRDFKKSYPQL 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + + +LD + A E L + + V + Sbjct: 121 HLSVLGEGAWRIQKMIGQGELDMGVV-----AGGNFPETLEVRRFLREEIVICVPPDHPF 175 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 Q P + + ++ G P I++ F S V Sbjct: 176 AQRKSVSLVEFIREPLVFY--KEGYYIREFFLEVLKGAGSAPNIVFETNLFSLVKSLVRN 233 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIA 290 G +++ R+V A P P + L + + Y + + Sbjct: 234 GTGISI----FLRMVVAADTDLVAVPFDPPLHLDLLIAWKKDTYLSLANRAFV 282 >UniRef50_P52670 HTH-type transcriptional regulator ilvR n=98 Tax=Bacteria RepID=ILVR_CAUCR Length = 296 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 104/287 (36%), Gaps = 9/287 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++ R+F +A+T + RAAE++ +T P +SI ALE+ +G LF R ++ L Sbjct: 1 MDIRQFRHFAAVAETLHFGRAAERLGITQPPLSQSIQALEKALGAPLFARTKRHVELTAL 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTY-PTIIFDQLISLGDKYEGV 121 G++ + + A+ + + + +T +++ D + + + GV Sbjct: 61 GRQWLPHVLEALAAVDALPDTARRLRDGQTGYLSLSFVSTADYSVLPDLVRRYAEAFPGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 Q VE + + + + + I + + L L L + + Sbjct: 121 EIQLVEATSDVQVPAIQAGERHAGIIIPPPNRSLPAA--LAYRRLVSEPLVAVTPEAWGA 178 Query: 182 RQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 +L L ++P + F ++ + G I+ IS V G Sbjct: 179 EGPLDLAALADVPLVLFPRTVAPAFHDLVTGYVAARGQPVRIVQEAIQMQTIISLVSAGL 238 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATML 286 + + P R + ++Y D P+ E R T+ Sbjct: 239 GMALAPAS-LRKLARVGVRYVDLVDPPIL--ETGLVWRRDEAAPTLQ 282 >UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n=1 Tax=Bacillus sp. B14905 RepID=A3I8L6_9BACI Length = 292 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 105/294 (35%), Gaps = 16/294 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + + F+ + + + +AAEK+ ++ + I LE+++G LF R I + +A Sbjct: 1 MEIRHLHYFMAVCEELHFTKAAEKLGISQPTLSQQIRVLEDELGMPLFDRIGKKIVVTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNT-YPTIIFDQLISLGDKYEGV 121 G L+ + L + I + + +I +GI + I +I K+ V Sbjct: 61 GALLFTYATAMLNTLQNVKGAIKDLQEVQGGQIRVGIMPSDLDYRITQLVIDFHQKFPRV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + ++ + + ++D I V+ + L I L VS+ + Sbjct: 121 KLTI--LASIDIMRQVLENEVDIGI-----GTNVEPHDRLVIIPLRKEEYVVTVSKEHPW 173 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L++LP + +++ ++ G I S + ++ V Sbjct: 174 AHREAVTIAELKDLPLVMYP--EGFLGREIVEETVKKHGFQLHTILETSSVTSIMNLVRA 231 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAE 291 TV P+ + +N + L+ + + R RY + E Sbjct: 232 NIGATVQPYPLIQQMNDSDLRIIRLTD-TIPSRSLSIIYRVDRYVSHATTAFIE 284 >UniRef50_C6XNZ9 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ9_HIRBI Length = 293 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 89/287 (31%), Gaps = 12/287 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 +F ++R F+ +A+ + R AE+++MT P + + LE +G LF R ++ L Sbjct: 1 MFEFSQLRCFVAVAEEMHFGRGAERLNMTQPPVSRQVQVLERVLGTPLFDRTSRSVKLTP 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQLISL-GDKYEG 120 AG+ + + + + I LI + K Sbjct: 61 AGKRFLVEAKHILRISQDAAAIAKRVASGEVGNLAISFTAASGYSYLPHLIDVCCSKLPS 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 E + I L Q+D + + + E + +L + Sbjct: 121 TQLILREMITSDQIQALESGQVDIGLLRGRFNLKGYEK-----RRILREKLIAAIPASDP 175 Query: 181 ERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + + + ++ Q F M++ + + P +S V Sbjct: 176 KASKETLTLQDFHASNFIMYTPQRAGYFHDMLNKHFERANVEPIFTQYMSQIHTMLSLVH 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTA 283 ++P A ++ + ++Y Y E + + Sbjct: 236 ANLGAAIVPE-AASVLKFSNVEYRPLELPSHYPVELHIVWKKNNDNP 281 >UniRef50_B4ETB5 LysR-family transcriptional regulator n=7 Tax=Enterobacteriaceae RepID=B4ETB5_PROMH Length = 297 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 114/293 (38%), Gaps = 16/293 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + +R FI + Q N +RAA+ + +T +SI LE+++G L R+ + + L Sbjct: 1 MDI---RVLRYFIEVVQLNGFSRAADALFITQPAISRSIKKLEDELGTVLLIREVDGVKL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIGIDNTYPT-IIFDQLISLGDKY 118 G LY+ + + ++++ +++ + + +G+ + D +++ ++ Sbjct: 58 TDDGAILYEHAKQILAQFNSMNKALNDKDEPLTGALNVGLPPVIASTYFADIIMAFSSRH 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 V + E + D + + ++ + + EL + L LV++ Sbjct: 118 PNVELKIFELGTKQMEDAMLEGTVETAAVMLPFNDKDFELTIFS-----EDHLMLLVAQS 172 Query: 179 YEERQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + +++++ L ++ ++ + P I+ R I+ Sbjct: 173 HPLAKDKKVNFKQLITERFIFF--SEDFRINDLVRSACGIYNTEPQIVGRSNHLDLIIAM 230 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 V+ G +T++P+ L + Q L + +N + + Sbjct: 231 VKAGVGITLLPNSMCNKYPIDDLVVIPITSPRLSYQLALATNQNSYQSRSCQA 283 >UniRef50_C6XSY8 LysR substrate-binding n=12 Tax=Bacteroidetes RepID=C6XSY8_PEDHD Length = 307 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 106/292 (36%), Gaps = 13/292 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + ++ F +LA+ +AAE++ ++ + I +EE LF R + L A Sbjct: 5 IELRHLKYFQVLAEELKFRKAAERLFISQPGLSRQIMQMEEIFNVALFDRSKKKVELTAA 64 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSRE-IVIGIDNTYPTIIFDQL-ISLGDKYEGV 121 G L ++ ++ L + ++ N G+ + IG + I +L + L +Y G+ Sbjct: 65 GLYLKDEVDFLFNHLETVKRQLDNIGQGRETELRIGFLGSAVQKIVPELVLGLNKEYPGI 124 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E I+ L +LD H E ++ + ++ +++ Sbjct: 125 QTILDEMPNKMQIELLEKDKLDLGFVRLHRLP-----EGISRHLVQQETFSLVLPKQHPI 179 Query: 182 R----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + P++ ++ + +I + G P + +R + + +E Sbjct: 180 NEFNFKGIAEFSNEPFIFFSSEDSPFYHDLITSICEDHGFRPKVFHRSVNALTIFKLIEE 239 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G L ++P N +++ + + P E + + + I Sbjct: 240 GMGLAIVPTSLQYGYNL-NVRFIELKNIP-QRTELYVAWKASNRNPALKNVI 289 >UniRef50_Q7WNK0 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNK0_BORBR Length = 299 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 103/286 (36%), Gaps = 4/286 (1%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +++F LA+ + RAA +++ PF SI LEEQ+G+ L R ++ L A Sbjct: 5 IELRHLKHFAALAEELHFGRAARLCNISQPPFSVSIRQLEEQLGFALVERSSRDVRLTPA 64 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFD-QLISLGDKYEGV 121 G Y + ++ + G + +G + D + Y V Sbjct: 65 GTAFYSEACKALSQVRQAADVAARVHGGLDGVLCVGFFASMLYRGLDRAVDRFRATYPTV 124 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 Q +E S + I L R + + L L L R+ Sbjct: 125 DLQLLELSTSDQIPALLRRHIHYGFVHSTRLPAEIAAGELLREPFL-LCLPERHPARHRR 183 Query: 182 RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFL 241 RQ+ + P++ ++ + A G +P I ++ ++ ++ V +G + Sbjct: 184 RQKLADFRAEPFVLFSRTFSPSYYDQVVARCLAAGFHPDIKHQVRHWLTVVACVSKGMGI 243 Query: 242 TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQ 287 T++P A + +++ + + ++ +A + Sbjct: 244 TLVPR-ALSRADLPGVRFSAIEDSTVESIVHGAWLKGDGDSAIVQA 288 >UniRef50_Q12BP5 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12BP5_POLSJ Length = 319 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 101/269 (37%), Gaps = 12/269 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++R F +LA + RAA ++H++ P IA+LE ++G LF R +++L++A Sbjct: 1 MELRQIRYFTVLADELSFTRAARRLHVSQPPLSFQIASLEAELGARLFNRTSRSVALSEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNT-YPTIIFDQLISLGDKYEGV 121 G+ V RL + + +G+ + + + + V Sbjct: 61 GKAFLPHAQAVLARLEEARGHVQRVASGLQGRVQVGLAGSHFLGPFPQFIQQFRLQRPAV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + + L D +LD +S + E ++ + L + + + Sbjct: 121 EIALHEMKPSDHLQALRDGRLDLCVSRNPL-----EDAQISAALLWRDPVVVALPPGHRL 175 Query: 182 ----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 R L++ ++ +R + F A + G P I + A ++ V Sbjct: 176 AARSRLRLAELKDEEFVFLRLDSSP-FAARLFEACVQAGFAPHIAQQVVEVPAALNLVAA 234 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRP 266 G + ++P +L A +P P Sbjct: 235 GLGVALVPASLAQLRADAVGICSLSPSMP 263 >UniRef50_Q390Q2 Transcriptional regulator, LysR family n=6 Tax=Bacteria RepID=Q390Q2_BURS3 Length = 294 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 109/301 (36%), Gaps = 14/301 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ + RAAE++H+ I ALE+++G LF R ++L A Sbjct: 1 MDLRHLRYFLAVAEEGHFGRAAERLHIVQPALSMQIRALEDELGTALFERSTRKVALTDA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDN--TYPTIIFDQLISLGDKYEG 120 G+ L + ++ + + R + + IG + D LI+ + Sbjct: 61 GRLLVTEARHTLEQAERAKAVVQRAARGETGVVRIGFVGNAVATGRLSDDLIAFHAAWPE 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 VT E + + + +LD + L + + ++S R+ Sbjct: 121 VTLDLHEMAPAAQQEAILAGRLDIGYC---PAFGTAFDPKLAVRTVGNWAWDVMMSDRHA 177 Query: 181 ERQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 + L + P++ + I + G P I ++ S ++ ++ Sbjct: 178 LAKQRSVSVAALADEPFIFYAADGDDEGQLAILR--QVLGKAPRIAHKVSSTLSVLALTG 235 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGT 296 G + ++P R+ P + A P E + R + Q++A + Sbjct: 236 AGLGVALVPSPLSRIAAPNIVYRKLAGGVPG--SELVAISRIGAEWGAVRQYLAMLGERA 293 Query: 297 S 297 + Sbjct: 294 A 294 >UniRef50_B1HQK1 HTH-type transcriptional regulator n=3 Tax=Bacillales RepID=B1HQK1_LYSSC Length = 297 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 112/295 (37%), Gaps = 16/295 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI K+++ FI +++ N ++AAE++H++ +I LE +IG L R N+ L Sbjct: 1 MDI---KQLQYFIAVSEHMNFSKAAERLHISQPSLSNAIKKLEHEIGSPLLDRNTRNLQL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISLGDKYE 119 +AG+ L+++ + + + + E+ + EI IG+ + + + + Y Sbjct: 58 TEAGEVLFERAKVIVKNMEVLKKEMDEVVVHGTSEITIGVMESIKHWLPKVIANYKKDYP 117 Query: 120 GVTAQPVE-FSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 + V+ V +L + II+ Q + L + L RL ++ Sbjct: 118 QMMIHLVDILGSKRVKKSLKSYKTHLIITNQLMDDPE-----LEVKTLYEERLVAVLPLH 172 Query: 179 YEERQ----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + + P++ I G + I + F +S Sbjct: 173 HPLAKKETLSISDISAEPFII--STEGFQTRRDILNTFEQAGKSIDIQFEIERFETAVSL 230 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V +T++P + T+ + + YL ++N + Q + Sbjct: 231 VRENLGITILPENYLQGPTAKTIVKKEIEGANLCRNVYLVYLKNRHLPFAIRQLL 285 >UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3V4_HERA2 Length = 298 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 106/301 (35%), Gaps = 15/301 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++R F +A+ N+ +AA + H+ K++ ALE+++G LF R + L+ A Sbjct: 1 MELSQLRYFEAVARLGNVTKAAHEQHIAQPSLSKALRALEQELGVHLFDRVGRGVELSDA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFD-QLISLGDKYEGV 121 G+ L V L A + + + + + +G+ T T + L + +Y G+ Sbjct: 61 GKLLLPYARRVLAELQAARHALQSRADLTVGHVSLGVTPTVGTRLIPQALAAFNRRYRGI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + +++ L +D I V + + L L V ++ Sbjct: 121 QLELHEAGASELVELLNAGVVDLAIVSALV-------HGVESTTLMSEPLVVAVGLQHRF 173 Query: 182 RQEQEL----LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 Q Q + L++ ++ G P I+ +S V Sbjct: 174 AQRQSIAANELRDEGFILFP--QGYELRNYTLQLCEQAGFAPRIVLDGGEMDTVVSLVAA 231 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTS 297 G + V+P A DA ++ +S R A L + + Sbjct: 232 GLGVAVVPQLAIDQRMGLHALMIDAGGLQRTLRLIRHSQRQPSPAAAALHRVLHEWVSQH 291 Query: 298 H 298 + Sbjct: 292 Y 292 >UniRef50_D0J1D7 Transcriptional regulator, LysR family n=12 Tax=Bacteria RepID=D0J1D7_COMTE Length = 306 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 109/293 (37%), Gaps = 12/293 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + ++++ F+ +A+ ++ RAAE++H++ SP + IA LE+++G LF R I L + Sbjct: 1 MLDIRQLQYFVAVAEEEHVGRAAERLHISQSPLSRQIAQLEDKLGLVLFERSQQRIRLTR 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGID--NTYPTIIFDQLISLGDKYE 119 G+ + + + +++ GR + IG + ++ + L LG Sbjct: 61 DGRTFLAETRALLTHANRLESLGRRLGRGDEGGLCIGYLEYAMHSGVLPNALRELGQGRP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 V + ++ L R LD + + +LE +++ + V + + Sbjct: 121 AVHIALYNQQSDAQLEGLRQRSLDIALVCEPPQPDDPDLE---AAQVLNDPMLLAVPKGH 177 Query: 180 EER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 E L + W+ ++ + A + A G PTI +A + V Sbjct: 178 PLAEKQDIEPADLAQQRWIGVKHKESALRHDTLIAACAKAGFTPTISMEATEPLAALGLV 237 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 G +T I R P + + Y + + + Sbjct: 238 AAGLGVTTIQQS-LRHQTPEGVMLRELSWLT-YRTPLWAAWHKINLRPLVEEF 288 >UniRef50_C3NQ92 Transcriptional regulator of alpha-acetolactate operon AlsR n=32 Tax=Vibrio RepID=C3NQ92_VIBCJ Length = 293 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 101/287 (35%), Gaps = 12/287 (4%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 + + M+ F +A+ + RAAE++ + P + I LEE++G LF R + L Sbjct: 1 MMEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTP 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRSR-EIVIGIDNTYP--TIIFDQLISLGDKYE 119 AG+ YQ + Q++ + + R E+ +G + +++ +++ L + Sbjct: 61 AGELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIP 120 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 + VE + + ++QLD A E L L ++ + Sbjct: 121 DLQLIAVEHPMPELARMIQEKQLDIAFMRLPCYA----SEALRRKILFDDPFVAVIPAVH 176 Query: 180 EER----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAV 235 + L L + I+A G+N Y I+ Sbjct: 177 TLAEVEKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMA 236 Query: 236 ERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYT 282 + G + ++P ++ ++ P Q + S H + Sbjct: 237 QAGFGIAIVPLSLTDHLDH-SVVVKTIQDMPFVSQVAIVSDAGHHHP 282 >UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3192A Length = 343 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 90/289 (31%), Gaps = 13/289 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ +A+ + RAA ++H+ + LE ++G L R ++ +A Sbjct: 1 MELRQLEYFVAVAEEASFTRAAARLHVAQPGVSAQVRRLEAELGEQLLDRSGRSVRPTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTY-PTIIFDQLISLGDKYEGV 121 G + + A+ I G + IG+ ++Y ++ D L S + V Sbjct: 61 GVAVLPHARAALASVGAVRGAIEELTGLVRGRVAIGMVSSYPSAVLPDLLASFSRLHPDV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + + ++ L +LD + + L L L VS + Sbjct: 121 EITLGEDNSDRLVQALQHGELDLALIGSARTGPPP---GLATQTLTDEPLVAAVSHTHPL 177 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 L P + + +D G+ P I + + R Sbjct: 178 ATRSTLTVAALAGSPLMCLPR--GTGIRTALDDACATAGVEPRIAFEASDPVPLALLAAR 235 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATML 286 G + ++P L RP + R + Sbjct: 236 GLGVAILPASLA-AARSGELHAIALT-RPQPRGRIELAWRAEGPVSPAA 282 >UniRef50_C6D0V7 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D0V7_PAESJ Length = 299 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 48/290 (16%), Positives = 106/290 (36%), Gaps = 12/290 (4%) Query: 2 DIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLN 61 + +++ F+ +A+ ++ AA +H+T S K+I LEE +G LF R + LN Sbjct: 3 NFMELLQLQYFLTVARLEHVTEAARHLHVTQSSLSKTIQRLEEDLGVLLFDRVGRKLRLN 62 Query: 62 KAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG 120 ++G + L E+++ S I + ++ +++ + L K Sbjct: 63 ESGSRFLLRAERALFELDQGKQELNDWSSPEQGTIELAVNT--ASMLPNILREFRKKKPN 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 + + ++ +L +DF +S + E + + + L S R Sbjct: 121 IQFHVQMLTTQEMVAHLHRGDIDFCLSSPPLEGEDIECQIMYRDAIL---LAVPESHRLA 177 Query: 181 ERQEQEL--LQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 R L L+E ++ + + ++D+ + G P +Y + VE Sbjct: 178 GRSSVSLPELKEEWFVGV--KKGYGTRDLVDSICKKAGFEPKFVYEGDEPARINALVEAE 235 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQH 288 + IP A + Y + + + + L ++ + Sbjct: 236 IGIAFIPGTARNS--NGQIAYLEIDNNELVREIALLWHKSRYVSRAAQSF 283 >UniRef50_C6J497 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J497_9BACL Length = 306 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 104/295 (35%), Gaps = 18/295 (6%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + + FI + + + +AAE++ +T I LE+++G L R L +A Sbjct: 1 MEHRLLEYFIAVGEDLHFTKAAERLGITQPTLSHQIRLLEQELGTALIQRIGKKNYLTQA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVT 122 G L + V + EI G + ++ IG ++ D+LIS +Y G+ Sbjct: 61 GSILLEHARRVIYEVEQAKLEIGQITGVQRGQLRIGCSG--NHLLEDKLISFHRQYPGIE 118 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 +E + L QLD + + E++ L L +VS ++ Sbjct: 119 LTVLELATEETRAGLLANQLDLGVVFLPLQD-----EHIVSRPLFDEALVLVVSSQHAYA 173 Query: 183 ----QEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 E + +LP + + ++D GI + + +++ V Sbjct: 174 ELPEVTLEQVAQLPLVLFP--PKFYVRQLLDTACAEQGIEIRPVMELSTMESQVQMVIHH 231 Query: 239 HFLTVIPHFAWRLV----NPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 TV+P R + + + + + L R+ T+ I Sbjct: 232 VGGTVLPGSYARTLTSTNRRSGITFIPLAEPVPHKNVGLVYRRSTFMDPTLQAFI 286 >UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=Exiguobacterium RepID=C4L1Y9_EXISA Length = 294 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 110/293 (37%), Gaps = 17/293 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++M+ FI +A+ + RAAE +H+T K+I LE+++G LF R+ I L Sbjct: 1 MEFREMQYFIAVARAKSFTRAAEALHVTQPTLSKTIRHLEQELGVELFDRQRRQIELTDV 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFDQ-LISLGDKYEGV 121 G+ L + + ++L + N + + + I +G+ ++ F + L Y + Sbjct: 61 GEALMLESELLIRQLEDLPNHVFDITNSKRGLIRLGLPPLIGSLFFTKFLTVFHSSYPNI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + E + + L +LD I + S+ + L + R+ Sbjct: 121 RVEITEAGGHTLEHALEKGELDVIATVLPTSS------TFEETPFVTEELYAYLPERHPL 174 Query: 182 RQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 E L P++ + + ++ G P +I + +V + Sbjct: 175 ASRKQLLLEELASEPFVLF--TDEFSLHHVVRTACEQAGFTPRLIGESGQWDFLCMSVAQ 232 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATM-LQHI 289 G+ +T++P + +N +K R + + RY + I Sbjct: 233 GNAVTILPRSIMQEMNIYGVKAILLKQR--IPWQLGLATAKGRYLPYATREFI 283 >UniRef50_Q8NT56 Transcriptional regulator n=3 Tax=Corynebacterium glutamicum RepID=Q8NT56_CORGL Length = 293 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 98/297 (32%), Gaps = 21/297 (7%) Query: 3 IFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNK 62 +F +++R F+ +A + +AA ++ MT P + I LE+ +G TL R + + L Sbjct: 1 MFTLEQLRCFVAVANHLHFGKAAAELSMTQPPLSRQIQKLEKIVGATLLDRDNRKVELTT 60 Query: 63 AGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIF-DQLISLGDKYEG 120 AG + + + ++ IG I L L +K G Sbjct: 61 AGFAFLKDARLILNSTEKAAERARLASSGMWGQLNIGYTAAAGFSILGPTLNQLHEKMPG 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V+ E I L LD I +E L L L + + Sbjct: 121 VSVDLFEMVSTEQIAALESGLLDLGIGRL-----SSPVEGLQTRRLQADSLVLAAPKGHP 175 Query: 181 ERQE-----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPT---IIYRPYSFMAKI 232 + ++ L +P+LQ ++ + + + Sbjct: 176 LLDQNRPLLRKHLTGVPFLQHSPTKAKYLYDIVVR-----NFTINDAQVQHTLSQITTMV 230 Query: 233 SAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 S V G + ++P A + +N + ++Y P+ + E + + I Sbjct: 231 SLVASGLGVALVPESA-KKLNYSGVEYRHFYDLPVGLAELQAIYSTSNDNPAVRKFI 286 >UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0W9_PAESJ Length = 296 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 100/290 (34%), Gaps = 11/290 (3%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F + + RAA+K+ +T I LEE++G LF R I+L +A Sbjct: 1 MEIRQLEYFQAICDELHFTRAADKLGITQPTMSYQIKQLEEELGVPLFHRIGKKIALTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGR-RSREIVIG-IDNTYPTIIFDQLISLGDKYEGV 121 G L +++ + EI + IG + ++ L+ +KY G+ Sbjct: 61 GFILLNHSRNIFRSIDGAREEISELHHMERGSLTIGTLIGEINDLVSGLLVDFHNKYPGI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + + + V+D L +LDF ++ V + L F+ Sbjct: 121 SIKLLAL--EDVVDPLLQDELDFAVTIFPVDDD-----RFSKVSLYEEEFYFVAHSNSPL 173 Query: 182 RQEQELLQELPW--LQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 E + E + F +ID G+ + + + +S V+ G Sbjct: 174 SGEPSVTIEEAMKEPIIMFPKTHRCRQLIDTVCSMHGVAWEPVIETSAIKSILSLVQSGA 233 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 +++ L + + + + + +++ + + Sbjct: 234 GASILSKTLLELYPDQNMIMIPISNPSLRREVGIAYLKDRYIGKATIAFM 283 >UniRef50_UPI0001874129 transcriptional regulator, LysR-family n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI0001874129 Length = 296 Score = 239 bits (612), Expect = 6e-62, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 96/296 (32%), Gaps = 13/296 (4%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 M + +R FI +A+ ++++AA +H+ + I LE+ +G LF R + L Sbjct: 1 MVRVELRHLRYFITVAEHLSVSKAARHLHIVQPALSRQIRELEQDLGVDLFRRSSKGVEL 60 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDN--TYPTIIFDQLISLGDK 117 AG++ + + L + + IGI ++ I L Sbjct: 61 TPAGEQFIRDARAIMTDLQNARERVARIANGQYGALRIGIAPNYSWHPSILRPLREFKRL 120 Query: 118 YEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSR 177 +T + D +LD + R E L+ + RL V R Sbjct: 121 QPDITLMLEPALAARQQLKIADGKLDGGFL----AWRDPENPVLSGLAMFNCRLVLAVPR 176 Query: 178 RYEERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKIS 233 E LQ + ++ + + G++P +++ + Sbjct: 177 DSELHLSPPMHLADLQNQQCVWFSRDKAPSYYDFLINSCHVAGLSPQLVHLGADINTVLG 236 Query: 234 AVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V G +++P + +Y E++ R+ + + + Sbjct: 237 LVGAGMGYSIVPDSSQYNCPSEVALVPHPELTGLYTIEFV--WRSDSEDPALWRLV 290 >UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUQ0_OPITP Length = 301 Score = 239 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 99/291 (34%), Gaps = 12/291 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++R + +A T N RAAE+ ++T + I LE+++G+ LF R L +A Sbjct: 1 MELYQLRYAVAVADTGNFTRAAERCNVTQPSLSQQIINLEKEVGHKLFHRLGRRAVLTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTI-IFDQLISLGDKYEGVT 122 G ++ + + E+ + R I +G T + + + + Sbjct: 61 GAVFIERARQIVYDVENAAKELSDHPSLDRRITVGAIQTVAPYLLLPMIEVCKRELPNLQ 120 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 +E ++ + + LD I V +++ L L +V + + Sbjct: 121 INLIEDFRVDLVHGVVEGDLDLAIVTLPVDDP-----RVSVEPLMTEPLLLVVGKNHPFA 175 Query: 183 QEQE----LLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 +E L + ++ M + A I + P + YR + V G Sbjct: 176 TRKEISINDLADETFVTM--GESSTLAAQIRSFFGGHNFQPKVGYRCAQVATLKTLVAMG 233 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 ++++P + TL Y + + + Q + Sbjct: 234 LAISILPRVDQEEKDRETLTYLRLTGSAPTRELVVVRHLQRYQSRGAQQFL 284 >UniRef50_Q049X7 Fhu operon transcription regulator n=13 Tax=Lactobacillus RepID=Q049X7_LACDB Length = 284 Score = 239 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 106/294 (36%), Gaps = 18/294 (6%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 K++ F+++A+ I AA+++ + + LEE++G LF R+ I L +A Sbjct: 1 MNFKQLNYFLVVAEEGQITSAAKRLFVGQPALSYQLKQLEEELGAKLFIRQPYGIELTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIG-IDNTYPTIIFDQLISLGDKYEGV 121 G++L + + EI R + +G + ++ + +L + ++ GV Sbjct: 61 GKKLRDYAGQILTLAQNVQTEITELDRGGWGRVKLGSVSSSIGELPSAKLTAFARQHPGV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY-- 179 + E + G++D L LD I + NL ++ + + + + Sbjct: 121 SFDIYEDNTFGILDKLQGNLLDLAIVRTPYNRV-----NLNFVDISDEPMTAVTCQDFFP 175 Query: 180 -EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 + + + L P + R FE M G+ P + + I + G Sbjct: 176 GKGKVGLQDLAGQPLVIYRR-----FEDMFKEAFAEKGLTPNFVVKCDDSRTAIRWSDSG 230 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAED 292 + ++P + + D + R R +++ I Sbjct: 231 LGIALVPESIAKTYARGHIYPIDLAK---WRTRLQLVWRKDRVVTPLMRQIIAL 281 >UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding n=10 Tax=Pseudomonas RepID=Q4ZQQ6_PSEU2 Length = 304 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 96/290 (33%), Gaps = 8/290 (2%) Query: 2 DIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLN 61 D + + +R + +A N RAAE +H++ + I LE +G LF R ++ Sbjct: 11 DAVLLRHIRYLLAVADHGNFTRAAEALHVSQPALSQQIRQLESSLGVQLFDRTRRSVVPT 70 Query: 62 KAGQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIF-DQLISLGDKYE 119 AG+ L A +++ ++ +G+ T+ + + Y Sbjct: 71 DAGRVYLDHARRCLLELDAGKRALNDVSDLSRGQLRLGVTPTFSEYLIAPLIDRFSALYP 130 Query: 120 GVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRY 179 GV E + + L LD I A + + L +L + + Sbjct: 131 GVAIILTELPLEQITEALISDALDLAIGFAGSHAVEIDSQPLFDEQLCL--VMAKPASEK 188 Query: 180 EERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGH 239 + E LQ L + + ++DA + P I S + V +G Sbjct: 189 QAALTLEDLQALRFALL--APGFATRQLLDAWCQMQNFKPIIGLEANSIAILLKVVAQGR 246 Query: 240 FLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 T++P R P + P P L +N +A Sbjct: 247 MATILPDAIVRK-QPGLCEVQTIPALP-GRTVALLRRKNGYQSAAAKAFA 294 >UniRef50_Q7W5S7 LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7W5S7_BORPA Length = 315 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 103/298 (34%), Gaps = 14/298 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F++LA+T + RAA ++ + P + I LEEQ+G TLF R +SL A Sbjct: 16 MELRHLRYFLMLAETLHFGRAASRLGIAQPPLSRQIRDLEEQVGATLFYRGTRGVSLTDA 75 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGIDNTYPTIIFDQ-LISLGDKYEGV 121 G Q+ + E +G+ IVIG ++ + + L K+ G+ Sbjct: 76 GVAFAQRAAQIVAAADEAVFEAREAGQGRTGRIVIGFVHSLAYSLLPRVLPGFRQKHPGI 135 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + L Q+D I V + + + + Sbjct: 136 AVSLREVTVADKESALLSGQIDTGIYRPTVRHPE-----IATLPIFEEGFVLALPSGHPL 190 Query: 182 RQEQEL----LQELPWLQMRFQNRA-NFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 +++ + L++ P + R I A +R + + + V Sbjct: 191 ARKRRVSVHSLRDQPLILFRALRGDVGLHGTIAAFLRAHDVPVKACEEVGTIHVGMGLVL 250 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRD 294 G + +IP R+V+ + R+ + ++ + R+ Sbjct: 251 AGVGVCIIPET-SRMVHIEGVVTRPFAEAT-TRVSSTVCWRHQDSSRSLDAWVRHVRE 306 >UniRef50_B2JTF3 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JTF3_BURP8 Length = 309 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 101/294 (34%), Gaps = 18/294 (6%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R FI A+ + RAA ++H+T + IA LE ++G LF R + + L A Sbjct: 1 MELRHLRYFIAAAEEEHFGRAAVRLHITRPAVSQIIADLEGELGTPLFERLAHTVKLTAA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDN--TYPTIIFDQLISLGDKYEG 120 G+ L +L V L+ G+ + + IG + +I + Y Sbjct: 61 GRTLLPQLVRVMDDLNEAIILTKRVGQGMTGTLRIGYGSLTLMHSIFKAAVKLFRATYPE 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARV--------QELENLTISELPPL--R 170 + VE S + L + ++D S E E + + + Sbjct: 121 INLSLVELSTSLQPKALAEGKIDAGFMHLGPSPHPGKRRTEINMEREGIVLDSICIQTGS 180 Query: 171 LGFLVSRRYEERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPY 226 +G V + + E L + P + + + + + + G P I+ Sbjct: 181 VGVAVPNDHRFARRKSLTLEDLADEPLVVDPKSSSSLSYGQLYSLCQAAGFEPNIVQEVS 240 Query: 227 SFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHR 280 + ++++ + G + + P+ L + + +R Sbjct: 241 TIASQLNLISVGMGIGLA-VMGKNFQYPSDLTVIPLANLNYSTRFIFGWVRRQN 293 >UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9Z7_GEMAT Length = 296 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 98/295 (33%), Gaps = 16/295 (5%) Query: 1 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL 60 MDI + +R F+ +A +RAA +I + I LE+Q+G TLF R ++L Sbjct: 1 MDITL---LRAFLEVADAGAFSRAARRIGIAQPSLSLQIQRLEQQLGTTLFERHGRGVAL 57 Query: 61 NKAGQELYQKLFPVYQRLSAIDNEIHN-SGRRSREIVIGIDNTYPTIIFD-QLISLGDKY 118 G+ LY + + + A + + I +G T + L L ++ Sbjct: 58 TDVGKGLYPRARRIVDDVRAAEEAVRREVAEGFGSITVGAIPTIAPYVLPAALERLQHRH 117 Query: 119 EGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRR 178 G E ++D L + +D I+ + L L L V Sbjct: 118 PGARVVLREDYSAVLVDLLREGAIDVAIAALP-----YDFGTLPQDVLGSEMLLVAVPAL 172 Query: 179 YEERQE----QELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISA 234 + + LQ+ P + + + +NP+++ R Sbjct: 173 HPAARAGKITVAQLQDAPTVTL--DPVHCLGEQVAGFCDARQVNPSVVCRSAQLTTVFEM 230 Query: 235 VERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 V G L+++P A N + + R+ + + + Sbjct: 231 VGAGMGLSIVPQMAAAKHNTSRCAVVPLADMALERDIIALWPRDRAPSKVAMTFV 285 >UniRef50_P52666 HTH-type transcriptional regulator budR n=7 Tax=Enterobacteriaceae RepID=BUDR_KLETE Length = 290 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 101/293 (34%), Gaps = 13/293 (4%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 + +R F+ +A+ N RAA + ++ P + I LE +IG L R + L +A Sbjct: 1 MELRYLRYFVAVAEARNFTRAAHDLGISQPPLSQQIQRLEREIGTPLLRRLTRGVELTEA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYP--TIIFDQLISLGDKYEG 120 G+ Y + A + R + +V GI ++ + IF L +Y Sbjct: 61 GESFYVDACQILALSDAALEKTKGIARGMNGSLVPGITSSAAFHSQIFSLLYQFQQRYPA 120 Query: 121 VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE 180 V + VE + ++ L + +LD + + + + + + R + Sbjct: 121 VALRQVEGNMATLMHALGEAELDIAFVRLPCES----SKAFNLRIIAEEPMVIALHRSHP 176 Query: 181 E----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVE 236 L + + + + R G++ + + + IS V+ Sbjct: 177 LSGESALSLAQLSDAVPVIFPPEVAPGLYEQVYDGCRRAGVDMSRARQSSQISSSISMVD 236 Query: 237 RGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 G ++P + + + + E + R + T+ + + Sbjct: 237 AGFGFALVPQSMT-CICLPNVTWHPLQDASL-KTEIAIAWRRFERSRTVKRFL 287 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 111/301 (36%), Gaps = 17/301 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 ++ F ++A+ + + AA +H++ I ALEE G L R ++L A Sbjct: 1 MNRNQLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEI-HNSGRRSREIVIGIDNTY-PTIIFDQLISLGDKYEGV 121 G+ LY+ + + +I +G ++++G T ++ L S KY V Sbjct: 61 GEILYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGGHVLPPLLSSFYRKYPDV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 + V++ + D LD V+ L + L L +V+ + Sbjct: 121 NITMEIMNTEKVLERVSDLTLDLGFVEGEVTTGE-----LHVEALARDELVVVVAANHPL 175 Query: 182 ----RQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGI---NPTIIYRPYSFMAKISA 234 R E L LP + + + +I+ ++ G I+ S A A Sbjct: 176 AGRGRISWEELATLPLVM--REPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAIKGA 233 Query: 235 VERGHFLTVIPHF-AWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDR 293 VE G ++ + R +N K + P+Y + Y+ N ++ I R Sbjct: 234 VEAGLGAAILSKWTVRREINWGIFKQLLIENLPIYREFYVVLNNNKFHSPATQALIQFCR 293 Query: 294 D 294 + Sbjct: 294 E 294 >UniRef50_Q03TG2 Fhu operon transcription regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03TG2_LACBA Length = 285 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 101/292 (34%), Gaps = 16/292 (5%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 +++ F+ +A I AA+++HM P I LE ++G TL R I+L A Sbjct: 1 MNFRQLEYFLAVANAGQITAAAQQLHMAQPPLSYQIKQLEAELGVTLLNRATTGITLTPA 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNSGRR-SREIVIGIDNTYPTIIFDQ-LISLGDKYEGV 121 GQ L + D ++ + G+ + + +G+ ++ + L +L Y V Sbjct: 61 GQLLRDYAQQLVDLRDRADGQVRSLGQGLAGVLSVGVISSSMGATPNAKLRTLTRHYPKV 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVS----R 177 + E + G+ID L +D I +A L L + +V Sbjct: 121 QIRLFEDNTYGLIDRLAKHLIDVAIVRTPFTAP-----GLASKTLQTESMVAVVPQKYDH 175 Query: 178 RYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + E L +P + R FE + I+P I + E Sbjct: 176 FQAATLKVEDLATVPLIVYRR-----FEHLFQTTFTEKQISPFIACTCDDARTAVQWAEA 230 Query: 238 GHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + ++P T+ ++P + + + + + I Sbjct: 231 RMGVAIVPRSVAEQATGVTIHVRPIRYQPWRTTLKIVWPADITPSPLVQRFI 282 >UniRef50_Q67MJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MJ1_SYMTH Length = 273 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 87/270 (32%), Gaps = 17/270 (6%) Query: 30 MTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIH-NS 88 + + I LEE++G LF R + L AG+ L + +++ A + Sbjct: 2 VAQPSLSQQIRRLEEELGVLLFDRSRTPVRLTDAGEALLPHAEAILRQVEAAGAAVEERI 61 Query: 89 GRRSREIVIGIDNTYPTIIFD-QLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIIS 147 G RS +V+G + + + + +Y GV E + + + D ++ Sbjct: 62 GLRSGRLVLGSLPVTGSRLLPRAITAYRQRYPGVQITLREEPTQRLTELALADETDLTLT 121 Query: 148 PQHVSARVQELENLTISELPPLRLGFLVSRRYEER--------QEQELLQELPWLQMRFQ 199 V + L L + + + + P+L M + Sbjct: 122 TLPVGSDE-----LDWQPLLTEPILLALPPDHPLAADGPPHPAIPLSAVAGEPFLIM--K 174 Query: 200 NRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKY 259 F ++ A + G +P I + + V G +T++P A + + Sbjct: 175 PGYGFRDLVLAACQAAGFSPQIAFESAQIETLQAMVAAGLGVTLVPQMAADRSLRPSPVF 234 Query: 260 FDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 P+ L R+ + + Sbjct: 235 VPLAGAPLTRTLALAWRRDRPLPRSAQAFL 264 >UniRef50_UPI0001B565BC LysR family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B565BC Length = 298 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 100/288 (34%), Gaps = 16/288 (5%) Query: 5 ISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAG 64 +++R F+ +A+T + RAA +H+ + I LE Q+G LFTR L G Sbjct: 4 ELRQLRYFVAVAETTSFTRAAAALHIAQQSLSQQITVLERQLGAQLFTRDPRGARLTAIG 63 Query: 65 QELYQKLFPVYQRLSAIDNEIHNSGRRS-REIVIGID-NTYPTIIFDQLISLGDKYEGVT 122 + + V R + + R + + +T ++ + ++ + +T Sbjct: 64 ELFLPEARVVLARADTAVATVARAVRGEIGTLRLAFLASTANYLLPPVMRAVREHLPELT 123 Query: 123 AQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEER 182 E S +++ + D + D + + +++L L + ++ + Sbjct: 124 VTTAEVSIAELVEGVRDGRFDAGFTRPPL------VDDLATHTLLTEEVCAVLPTGHRLA 177 Query: 183 Q----EQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERG 238 L + PW+ + + DA+ G P ++ R + + V G Sbjct: 178 DRPALRLSDLADEPWVLTPRASWDPWHRKYDADFAAAGFTPEVVQRTATVQGLLGLVAAG 237 Query: 239 HFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATML 286 +T + A + + + + + R+ L Sbjct: 238 VGVTRLARSA-HSLRRTGVVFVPLEGESAHT---VVVWRSAGPRPAAL 281 >UniRef50_B8K739 Transcriptional regulator, substrate-binding of LysR family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K739_VIBPA Length = 297 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 102/293 (34%), Gaps = 18/293 (6%) Query: 4 FISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKA 63 K++ F LA+T N +AA+++ + S SI LE+Q+G L R + +SL Sbjct: 1 MDLKRLHYFNQLAKTGNFTKAADQLGIAQSALSTSIKKLEQQLGLKLVNRTERQMSLTAE 60 Query: 64 GQELYQKLFPVYQRLSAIDNEIHNS-GRRSREIVIGIDNTYPTIIFD-QLISLGDKYEGV 121 GQ L + + + + + E+ G S I G + L Y G+ Sbjct: 61 GQVLLRHAKIILEDVEQAEKELQELKGLTSGVIKFGAPAMLASYFLPDALEQFKKAYPGI 120 Query: 122 TAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEE 181 E + L + +LD + +E E + S L ++ V + Sbjct: 121 QINIHEAGTATLAQMLVNGELDLALIRG-----DREHEQIRQSLLAQDQIAACVPISHPF 175 Query: 182 RQEQELLQEL----PWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVER 237 + + + P + +N +++ + + P + + S V R Sbjct: 176 AKRSAITLDEFCQQPLVLF--KNGYFLRETVNSYCQQNKLTPQVHFETNLPELLKSMVRR 233 Query: 238 GHFL-TVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHI 289 + T +P + LK P+ +Q + +H + + Sbjct: 234 QVGIGTCLPILVA---DDPELKAIPF-DPPIPLQLGIGWKSSHYLSTAAKAFV 282 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.188 0.612 Lambda K H 0.267 0.0578 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,162,050,207 Number of Sequences: 3077464 Number of extensions: 131154590 Number of successful extensions: 451862 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 17527 Number of HSP's successfully gapped in prelim test: 1460 Number of HSP's that attempted gapping in prelim test: 403592 Number of HSP's gapped (non-prelim): 20452 length of query: 298 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 170 effective length of database: 646,480,964 effective search space: 109901763880 effective search space used: 109901763880 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 94 (40.3 bits)