 |
| Job Description | P16926 | | Confidence | 29.50% | Date | Thu Jan 5 11:35:56 GMT 2012 |
| Rank | 80 | Aligned Residues | 32 |
| % Identity | 25% | Template | c3bboW_ |
| PDB info |
PDB header:ribosome | Chain: W: PDB Molecule:ribosomal protein l24; |
PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome
|
| Resolution | 9.40 Å |
|
|   |   |
213 | . | . | . | . | . | . | 220 | |
. | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|  |  | . |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
D | I | R | V | G | D | V | L | . |
V | T | S | G | L | G | G | R | F | P | E | G | Y | P | V | A | V | V | S | S | V | K | L | D | T | Q | R | A | Y |
| Query Conservation |   |
  |
|   |   |
|
|   |
| . |
|
|
|
|
|   |
|   |
|
|   |
|
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|
|
|   |
|   |
|
|   |
|   |
| . | . | . | . |
|
| . |
|   |
|   |
|   |   |
|   |   |   |   |   |   |
|   |
| Template Sequence |   |
H | V | K | V | G | D | T | V | K | V | I | S | G | G | E | . |
. |
. |
. |
K | G | . |
K | I | G | E | I | S | K | I | H | K | H | N | S | T | V | I |
| Template Known Secondary structure |   |
| S |
|
| S | S |
|  |  |  |
| S | S | S | S | . | . | . | . | T | T | . |
|
|
| S |
|
|
|
|
| S | S | S |
|
|
|
|
| Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . |
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
|
|
|
. | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|